25 c1vciA_ Probab=100.00  E-value=4.3e-37  Score=258.18  Aligned_columns=215  Identities=23%

Q ss_pred             EEECCCCCCCCCCCEEEECCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCEEEECCEEHHHCCHHHHHHHEEEECCCC
Q ss_conf             43447420011585037349858987337756811788868652333332776898987423189768751105881673
Q batch____       613 LKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSP  692 (940)
Q Consensus       613 ~~~~~~~~~~L~~i~~~i~~g~~~~i~G~sGsGKStl~~~~l~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~i~~v~Q~p  692 (940)
                      +..+......|+++|+++++|++++++|+|||||||+++  ++.++.++.+|.+.+++.++.......  ..+.+++|..
T Consensus        12 l~~~y~~~~~L~~isl~i~~Ge~~~l~G~nGsGKsTll~--~l~g~~~p~~G~i~~~g~~~~~~~~~~--~~~~~~~~~~   87 (353)
T c1vciA_          12 LTKRFGNFTAVNKLNLTIKDGEFLVLLGPSGCGKTTTLR--MIAGLEEPTEGRIYFGDRDVTYLPPKD--RNISMVFQHM   87 (353)
T ss_dssp             EEEEETTEEEEEEEEEEECTTCEEEEECCTTSSHHHHHH--HHHTSSCCSEEEEEETTEECTTSCGGG--TTEEEECCCC
T ss_pred             EEEEECCEEEEECCEEEECCCCEEEEECCCCCCHHHHHH--HHHCCCCCCCCEEEECCEECCCCCHHH--CEEECCCCCC
T ss_conf             899848889863232468899789998799988889999--996687476007998888874578323--0220233320


Q ss_pred             CCCCCCCCCCCCCCCCCCCHHHHHCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             22332100000133443101221000133320122332222334444333333542000000022211132222332223
Q batch____       693 IGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYN  772 (940)
Q Consensus       693 ~~~~~~s~~~~~~~~~~~~r~lf~~~~~~~~~~~~~~~~~~n~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~r~~  772 (940)
                      .                                                                               
T Consensus        88 ~-------------------------------------------------------------------------------   88 (353)
T c1vciA_          88 T-------------------------------------------------------------------------------   88 (353)
T ss_dssp             C-------------------------------------------------------------------------------
T ss_pred             E-------------------------------------------------------------------------------
T ss_conf             0-------------------------------------------------------------------------------


Q ss_pred             CCHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC
Q ss_conf             10111110122123443334788887502125689999999874997565088700078467999999999985889885
Q batch____       773 RETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQT  852 (940)
Q Consensus       773 ~~~l~~~~~~~~i~~~l~~tv~ea~~~~~~~~~~~~~~~~L~~~gL~~~~l~~~~~~LSGGEkqRl~LAr~L~~~p~~~~  852 (940)
                                      +...+......+.......+..+.+..+++. ...++++.+||||||||++|||+|+.+|+   
T Consensus        89 ----------------~~~n~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~LSgGq~qrv~iaral~~~p~---  148 (353)
T c1vciA_          89 ----------------VYENIAFPLKKFPKDEIDKRVRWAAELLQIE-ELLNRYPAQLSGGQRQRVAVARAIVVEPD---  148 (353)
T ss_dssp             ----------------HHHHHHTTCCCCCHHHHHHHHHHHHHHTTCG-GGTTCCGGGCCSSCHHHHHHHHHHTTCCS---
T ss_pred             ----------------EEECCCCCCHHHHHHHCCHHHHHHHHHCCCC-EEECCCCEECCCCHHHHHHHHHHHCCCCE---
T ss_conf             ----------------0001211210000110000257876313851-01102520357661576888898507865---


Q ss_pred             EEEEECCCCCCCHHHHHHHHHHHHHH-HHCCCEEEEECCCHHHH-HHCCEEEECCCCCCCCCCEEEEECCHHHHHHCCCC
Q ss_conf             99981865578989999999999999-98798899980988999-75898999056675528889995797999838982
Q batch____       853 LYILDEPTTGLHFADIQQLLDVLHKL-RDQGNTIVVIEHNLDVI-KTADWIVDLGPEGGSGGGEILVSGTPETVAECEAS  930 (940)
Q Consensus       853 iLiLDEPTsgLD~~~~~~l~~~l~~l-~~~G~TvivIsHdl~~i-~~aD~ii~lg~~~g~~~G~iv~~Gtp~~l~~~~~~  930 (940)
                      +|||||||+|||+.+...+++.|+++ .+.|.|||+||||++.+ ..||+|++|      ++|+|++.|+|+|++.+|.+
T Consensus       149 llllDEP~s~LD~~~~~~~~~~l~~~~~~~g~tvi~vtH~~~~~~~~~drv~vl------~~G~i~~~g~~~ei~~~p~~  222 (353)
T c1vciA_         149 VLLMDEPLSNLDAKLRVAMRAEIKKLQQKLKVTTIYVTHDQVEAMTMGDRIAVM------NRGQLLQIGSPTEVYLRPNS  222 (353)
T ss_dssp             EEEEESTTTTSCHHHHHHHHHHHHHHHHHHCCEEEEEESCHHHHHHHCSEEEEE------ETTEEEEEECHHHHHHSCSB
T ss_pred             EEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHCCEEEEE------ECCEEEEECCHHHHHHCCCC
T ss_conf             999956101988899999999999999973982467730578888644889991------04757254598899737898


Q ss_pred             HHHHHH
Q ss_conf             589998
Q batch____       931 HTARFL  936 (940)
Q Consensus       931 ~t~~~l  936 (940)
                      .....+
T Consensus       223 ~~~a~~  228 (353)
T c1vciA_         223 VFVATF  228 (353)
T ss_dssp             HHHHHH
T ss_pred             CHHHHH
T ss_conf             227875