Phyre 2 alignment of P39279 with c2l23A_

Return to main results | Retrieve Phyre Job Id

Job Description | P39279
Confidence | 7.00% | Date | Thu Jan 5 11:58:48 GMT 2012
Rank | 28 | Aligned Residues | 12
% Identity | 58% | Template | c2l23A_
PDB info | PDB header:transcription | Chain: A: PDB Molecule:mediator of rna polymerase ii transcription subunit 25; | PDBTitle: nmr structure of the acid (activator interacting domain) of the human2 mediator med25 protein
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 242 | . | . | . | . | . | . | . | 250 | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | K | K | L | A | G | V | P | C | Q | V | Y | V
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | K | L | T | R | S | L | P | C | Q | V | Y | V
Template Known Secondary structure |  | S |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 33 | . | . | . | . | . | . | 40 | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions