17/01/2012 21:27:42 : INFO  : Run start: Tue Jan 17 21:27:41 GMT 2012
17/01/2012 21:27:48 : INFO  : Initialised job
17/01/2012 21:27:50 : INFO  : Renaming log file 'phyre2_20120117_212740.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/6d9ca16b82119ff1/phyre_20120117_212740.log'
17/01/2012 21:27:51 : INFO  : Initialised job:
Sequence
>batch____
MAISIKGVNTGVIRKSNNFIALALKIKEPRNKESLFFMSVMELRDLLIALESRLHQKHKL
DAAAHLQYEQARDKVIKKMAENIPEILVDELKNADINRRVNTLELTDNQGENLTFVLTLH
DGSKCELVVNELQIEMLARAIIHAINNAEMRELALRITSLLDFLPLYDVDCQDNGNLEYD
TYSQPEWKHNLFDHYLAVLYRFKDESGKEQFSGAVVKTREATPGKEIEAITRRMLDFSPR
LKKLAGVPCQVYVRTVAANNAQPLTQDQCLRALHHLRVQSTSKTAPQAK

17/01/2012 21:27:52 : INFO  : Checked sequence
17/01/2012 21:27:55 : INFO  : Finding homologues with PSI-BLAST
17/01/2012 21:27:57 : INFO  : PSI-BLAST 3 iterations
17/01/2012 21:28:51 : INFO  : PSI-BLAST 5 iterations
17/01/2012 21:29:43 : INFO  : Finished PSI-BLAST
17/01/2012 21:29:46 : INFO  : Running Buildali to generate a3m file
17/01/2012 21:31:27 : INFO  : Converting to HMM
17/01/2012 21:31:30 : INFO  : Calibrating HMM
17/01/2012 21:31:46 : INFO  : Searching HMM database
17/01/2012 21:38:16 : INFO  : Finished buildali
17/01/2012 21:38:18 : INFO  : Predicting secondary structure
17/01/2012 21:38:26 : INFO  : Predicted secondary structure (PSI-Pred)
17/01/2012 21:38:27 : INFO  : Predicting Disordered regions
17/01/2012 21:38:31 : INFO  : Predicted Disorder (Disopred)
17/01/2012 21:38:33 : INFO  : Running memsat_svm check
17/01/2012 21:50:48 : INFO  : Globular protein
17/01/2012 21:50:49 : INFO  : Predicted Transmembrane (memsat_svm) ID '6d9ca16b82119ff1'
17/01/2012 21:50:51 : INFO  : Initialising fold library search
17/01/2012 21:50:54 : INFO  : Initialised search input
17/01/2012 21:50:56 : INFO  : Building Ensemble models
17/01/2012 21:51:00 : INFO  : Building hh.c3fggA_.model.1.pdb
17/01/2012 21:51:15 : INFO  : Building c3fggA_.1.pdb
17/01/2012 21:51:29 : INFO  : Building c1nw1A_.2.pdb
17/01/2012 21:51:45 : INFO  : Building d1nw1a_.3.pdb
17/01/2012 21:52:00 : INFO  : Building d1v5ma_.4.pdb
17/01/2012 21:52:14 : INFO  : Building c3mesB_.5.pdb
17/01/2012 21:52:28 : INFO  : Building d1bbpa_.6.pdb
17/01/2012 21:52:43 : INFO  : Building c2hzqA_.7.pdb
17/01/2012 21:52:58 : INFO  : Building d2ox7a1.8.pdb
17/01/2012 21:53:12 : INFO  : Building c3ha4C_.9.pdb
17/01/2012 21:53:28 : INFO  : Building d1gkab_.10.pdb
17/01/2012 21:53:42 : INFO  : Building d1axia_.11.pdb
17/01/2012 21:53:57 : INFO  : Building d2b7ea1.12.pdb
17/01/2012 21:54:12 : INFO  : Building c1zxjB_.13.pdb
17/01/2012 21:54:27 : INFO  : Building c1h4tD_.14.pdb
17/01/2012 21:54:42 : INFO  : Building d2p84a1.15.pdb
17/01/2012 21:54:57 : INFO  : Building c2qyzA_.16.pdb
17/01/2012 21:55:10 : INFO  : Building d1osce_.17.pdb
17/01/2012 21:55:24 : INFO  : Building d1pm1x_.18.pdb
17/01/2012 21:55:38 : INFO  : Building c3c8uA_.19.pdb
17/01/2012 21:55:52 : INFO  : Building d1whra_.20.pdb
17/01/2012 21:56:23 : INFO  : Finished HH model building
17/01/2012 21:56:24 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
17/01/2012 21:58:26 : INFO  : html domain output complete ID '6d9ca16b82119ff1'
17/01/2012 22:06:37 : INFO  : Run end  : Tue Jan 17 22:06:36 GMT 2012
