Phyre 2 alignment of P39279 with c3g7uA_

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Job Description | P39279
Confidence | 4.58% | Date | Thu Jan 5 11:58:48 GMT 2012
Rank | 52 | Aligned Residues | 28
% Identity | 21% | Template | c3g7uA_
PDB info | PDB header:transferase | Chain: A: PDB Molecule:cytosine-specific methyltransferase; | PDBTitle: crystal structure of putative dna modification methyltransferase2 encoded within prophage cp-933r (e.coli)
Resolution | 1.75 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 245 | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | A | G | V | P | C | Q | V | Y | V | R | T | V | A | A | N | N | A | Q | P | L | T | Q | D | Q | C | L | R | A | L | H | H | L | R
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | G | G | P | P | C | Q | G | F | S | . | . | . | . | . | D | D | S | R | N | Q | L | Y | M | H | F | Y | R | L | V | S | E | L | Q
Template Known Secondary structure |  |  |  |  |  |  |  | T | T |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 75 | . | . | . | . | 80 | . | . | . |  |  |  |  |  | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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