Phyre 2 alignment of P39279 with c2qrvC_

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Job Description | P39279
Confidence | 5.92% | Date | Thu Jan 5 11:58:48 GMT 2012
Rank | 38 | Aligned Residues | 30
% Identity | 20% | Template | c2qrvC_
PDB info | PDB header:transferase/transferase regulator | Chain: C: PDB Molecule:dna (cytosine-5)-methyltransferase 3-like; | PDBTitle: structure of dnmt3a-dnmt3l c-terminal domain complex
Resolution | 2.89 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 244 | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | L | A | G | V | P | C | Q | V | Y | V | R | T | V | A | A | N | N | A | Q | P | L | T | Q | D | Q | C | L | R | A | L | H | H | L | R
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | Y | G | A | T | P | P | L | G | H | T | . | . | . | . | C | D | R | P | P | S | W | Y | L | F | Q | F | H | R | L | L | Q | Y | A | R
Template Known Secondary structure |  |  |  |  |  |  |  | T | T | T | S | . | . | . | . | S |  | S |  | T |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 242 | . | . | . | . | . | . | . | 250 | . |  |  |  |  | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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