BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= batch____
         (136 letters)

Database: uniref50.fasta 
           3,077,464 sequences; 1,040,396,356 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P0AFW6 Regulator of nucleoside diphosphate kinase n=155...   277   7e-74
UniRef50_C5S652 GreA/GreB family elongation factor n=2 Tax=Prote...   129   2e-29
UniRef50_A6VVR5 GreA/GreB family elongation factor n=15 Tax=Prot...   121   5e-27
UniRef50_B8GS58 GreA/GreB family elongation factor n=22 Tax=Prot...   114   9e-25
UniRef50_Q3SMM4 GreA/GreB family elongation factor n=1 Tax=Thiob...   114   1e-24
UniRef50_Q6MQZ8 Regulator of nucleoside diphosphate kinase n=1 T...   112   4e-24
UniRef50_B9MBQ3 GreA/GreB family elongation factor n=6 Tax=Betap...   112   4e-24
UniRef50_Q3BX42 Regulator of nucleoside diphosphate kinase n=9 T...   111   6e-24
UniRef50_Q7MD62 Transcription elongation factor n=10 Tax=Proteob...   111   9e-24
UniRef50_Q2LTP9 Transcription elongation factor n=2 Tax=Deltapro...   110   1e-23
UniRef50_A4XNX9 GreA/GreB family elongation factor n=16 Tax=Bact...   109   2e-23
UniRef50_A5F052 Regulator of nucleoside diphosphate kinase n=31 ...   108   4e-23
UniRef50_Q3K4S3 Regulator of nucleoside diphosphate kinase n=2 T...   104   7e-22
UniRef50_Q1H3Z9 GreA/GreB family elongation factor n=1 Tax=Methy...   103   1e-21
UniRef50_C9P6Y2 Regulator of nucleoside diphosphate kinase n=1 T...   102   4e-21
UniRef50_B5EI69 GreA/GreB family elongation factor n=6 Tax=Desul...    99   3e-20
UniRef50_B5JTX6 Transcription elongation factor n=1 Tax=gamma pr...    98   6e-20
UniRef50_B9NGJ6 Predicted protein n=12 Tax=cellular organisms Re...    97   2e-19
UniRef50_C3X2V3 GreA/GreB family elongation factor n=2 Tax=Oxalo...    97   2e-19
UniRef50_A1U1V6 GreA/GreB family elongation factor n=2 Tax=Marin...    96   3e-19
UniRef50_A0LL17 GreA/GreB family elongation factor n=3 Tax=Bacte...    93   2e-18
UniRef50_C6RP41 GreA/GreB family elongation factor n=4 Tax=Acine...    92   4e-18
UniRef50_B0SEQ9 Transcription elongation factor n=2 Tax=Leptospi...    91   1e-17
UniRef50_B8G0E1 GreA/GreB family elongation factor n=2 Tax=Desul...    91   1e-17
UniRef50_B3PF63 Regulator of nucleoside diphosphate kinase n=1 T...    89   4e-17
UniRef50_Q11P04 Transcription elongation factor n=1 Tax=Cytophag...    89   5e-17
UniRef50_A6GQE5 Nucleoside diphosphate kinase regulator n=1 Tax=...    87   2e-16
UniRef50_A4BB58 Nucleoside diphosphate kinase regulator n=1 Tax=...    86   3e-16
UniRef50_A6C278 Nucleoside diphosphate kinase regulator protein,...    86   4e-16
UniRef50_B2SQJ5 Regulator of nucleoside diphosphate kinase n=8 T...    84   1e-15
UniRef50_A9MBQ4 GreA/GreB family elongation factor n=36 Tax=Bruc...    84   1e-15
UniRef50_A9GAI2 Regulator of nucleoside diphosphate kinase n=1 T...    82   4e-15
UniRef50_A1TUC9 GreA/GreB family elongation factor n=4 Tax=Burkh...    81   8e-15
UniRef50_A6X582 GreA/GreB family elongation factor n=3 Tax=Rhizo...    80   2e-14
UniRef50_D1SYS0 GreA/GreB family elongation factor n=1 Tax=Acido...    80   2e-14
UniRef50_C6X5Q8 Transcription elongation factor n=1 Tax=Flavobac...    80   2e-14
UniRef50_A7HAZ2 GreA/GreB family elongation factor n=5 Tax=Myxoc...    79   4e-14
UniRef50_A9EFF1 GreA/GreB family elongation factor n=1 Tax=Ocean...    78   9e-14
UniRef50_Q5QX12 Transcription elongation factor family protein n...    78   1e-13
UniRef50_B7L307 GreA/GreB family elongation factor n=1 Tax=Methy...    77   1e-13
UniRef50_A7HFE1 GreA/GreB family elongation factor n=1 Tax=Anaer...    77   1e-13
UniRef50_Q5P744 Transcription elongation factor n=3 Tax=Proteoba...    77   2e-13
UniRef50_Q4KB20 Acetyltransferase, GNAT family family n=9 Tax=Ba...    76   3e-13
UniRef50_Q13WN5 GreA/GreB family elongation factor n=50 Tax=Burk...    75   5e-13
UniRef50_B8IFL5 GreA/GreB family elongation factor n=8 Tax=Methy...    75   5e-13
UniRef50_Q2GA51 GreA/GreB family elongation factor n=1 Tax=Novos...    75   9e-13
UniRef50_C6XWY5 Transcription elongation factor GreA/GreB domain...    74   1e-12
UniRef50_Q0BZP7 Regulatory protein n=1 Tax=Hyphomonas neptunium ...    74   1e-12
UniRef50_C0N448 Putative uncharacterized protein n=1 Tax=Methylo...    74   2e-12
UniRef50_A8LN19 GreA/GreB family elongation factor n=8 Tax=Alpha...    73   2e-12
UniRef50_A6EIL5 Nucleoside diphosphate kinase regulator protein,...    73   3e-12
UniRef50_Q74EX3 Nucleoside diphosphate kinase regulator protein,...    72   8e-12
UniRef50_C0A6F4 GreA/GreB family elongation factor n=1 Tax=Opitu...    69   6e-11
UniRef50_A7IJH2 GreA/GreB family elongation factor n=4 Tax=Rhizo...    68   1e-10
UniRef50_Q15Z69 GreA/GreB family elongation factor n=1 Tax=Pseud...    67   1e-10
UniRef50_B0T793 GreA/GreB family elongation factor n=1 Tax=Caulo...    67   1e-10
UniRef50_C6WYK0 GreA/GreB family elongation factor n=2 Tax=Methy...    67   2e-10
UniRef50_C7CFG6 Putative regulator n=1 Tax=Methylobacterium exto...    66   4e-10
UniRef50_A5VGM9 GreA/GreB family elongation factor n=1 Tax=Sphin...    65   6e-10
UniRef50_A7HXN2 GreA/GreB family elongation factor n=1 Tax=Parvi...    65   7e-10
UniRef50_A3PS97 GreA/GreB family elongation factor n=4 Tax=Rhodo...    64   1e-09
UniRef50_A5V983 GreA/GreB family elongation factor n=1 Tax=Sphin...    64   2e-09
UniRef50_B0T7C4 GreA/GreB family elongation factor n=1 Tax=Caulo...    63   3e-09
UniRef50_Q930S2 Putative uncharacterized protein n=1 Tax=Sinorhi...    61   1e-08
UniRef50_C0QME5 GreA2 n=1 Tax=Desulfobacterium autotrophicum HRM...    61   1e-08
UniRef50_C6VSR5 GreA/GreB family elongation factor n=2 Tax=Sphin...    60   1e-08
UniRef50_B8IHN9 GreA/GreB family elongation factor n=1 Tax=Methy...    60   2e-08
UniRef50_Q98F06 Nucleoside diphosphate kinase regulator n=2 Tax=...    60   2e-08
UniRef50_B1ZD84 GreA/GreB family elongation factor n=4 Tax=Methy...    60   2e-08
UniRef50_Q3SU57 GreA/GreB family elongation factor n=9 Tax=Brady...    60   3e-08
UniRef50_A5FHU8 GreA/GreB family elongation factor n=1 Tax=Flavo...    59   3e-08
UniRef50_B4RF21 Transcription elongation factor n=2 Tax=cellular...    59   5e-08
UniRef50_B1ZU20 GreA/GreB family elongation factor n=1 Tax=Opitu...    58   8e-08
UniRef50_A6EMP4 Transcription elongation factor n=4 Tax=Bacteroi...    57   2e-07
UniRef50_A0LZA7 Transcription elongation factor n=1 Tax=Gramella...    55   5e-07
UniRef50_A4CMB9 Nucleoside diphosphate kinase regulator n=1 Tax=...    54   1e-06
UniRef50_B4RBL2 Transcription elongation factor n=1 Tax=Phenylob...    54   2e-06
UniRef50_Q13CU9 Putative uncharacterized protein n=1 Tax=Rhodops...    53   3e-06
UniRef50_A7HXN3 GreA/GreB family elongation factor n=1 Tax=Parvi...    52   5e-06
UniRef50_C6XVH8 Transcription elongation factor n=1 Tax=Pedobact...    52   6e-06
UniRef50_A5FHJ3 GreA/GreB family elongation factor n=3 Tax=Flavo...    51   9e-06
UniRef50_Q98F07 Nucleoside diphosphate kinase regulator; Rnk n=2...    50   2e-05
UniRef50_B4W8F1 Putative uncharacterized protein n=1 Tax=Brevund...    50   2e-05
UniRef50_B9KZF4 Transcription elongation factor greA n=2 Tax=The...    50   3e-05
UniRef50_A6LPL4 Transcription elongation factor greA n=30 Tax=Cl...    49   7e-05
UniRef50_A5FRA2 Transcription elongation factor n=3 Tax=Dehaloco...    48   7e-05
UniRef50_UPI00016C498C transcription elongation factor greA n=1 ...    48   9e-05
UniRef50_Q3ATA7 Transcription elongation factor greA n=13 Tax=Ba...    47   1e-04
UniRef50_Q0B0N4 Transcription elongation factor greA n=6 Tax=Clo...    47   2e-04
UniRef50_C6WVB7 GreA/GreB family elongation factor n=2 Tax=Methy...    47   3e-04
UniRef50_C0QWD9 Transcription elongation factor n=2 Tax=Brachysp...    46   3e-04
UniRef50_D0J9T5 Transcription elongation factor n=55 Tax=Bacteri...    46   4e-04
UniRef50_A5D4X0 Putative uncharacterized protein n=1 Tax=Pelotom...    46   4e-04
UniRef50_Q97EB6 Transcription elongation factor greA n=6 Tax=Clo...    46   4e-04
UniRef50_Q4HT85 Transcription elongation factor n=1 Tax=Campylob...    45   7e-04
UniRef50_P64276 Transcription elongation factor greA n=48 Tax=de...    45   8e-04
UniRef50_C1ZBG3 Transcription elongation factor n=1 Tax=Planctom...    45   8e-04
UniRef50_C0QKN0 Transcription elongation factor n=1 Tax=Desulfob...    45   8e-04
UniRef50_Q3Z8E7 Transcription elongation factor greA n=2 Tax=Deh...    44   0.001
UniRef50_D2R891 Transcription elongation factor GreA n=1 Tax=Pir...    44   0.001
UniRef50_Q04EK0 Transcription elongation factor greA n=4 Tax=Bac...    44   0.002
UniRef50_Q11G80 GreA/GreB family elongation factor n=1 Tax=Chela...    44   0.002
UniRef50_C4L6P4 GreA/GreB family elongation factor n=1 Tax=Exigu...    44   0.002
UniRef50_Q30T56 Transcription elongation factor n=3 Tax=Campylob...    44   0.002
UniRef50_A0M1N1 GreA-like transcription elongation factor n=3 Ta...    44   0.002
UniRef50_B9XEY1 GreA/GreB family elongation factor n=1 Tax=bacte...    43   0.003
UniRef50_Q2LR03 Transcription elongation factor greA n=1 Tax=Syn...    43   0.003
UniRef50_Q1H282 GreA/GreB family elongation factor n=2 Tax=Prote...    43   0.003
UniRef50_C4XLU8 Transcription elongation factor greA n=11 Tax=De...    43   0.004
UniRef50_Q1AU03 Transcription elongation factor n=1 Tax=Rubrobac...    42   0.004
UniRef50_C9RKD0 Transcription elongation factor n=1 Tax=Fibrobac...    42   0.004
UniRef50_B1MX52 Transcription elongation factor greA n=11 Tax=Fi...    42   0.005
UniRef50_C8S319 GreA/GreB family elongation factor n=1 Tax=Rhodo...    42   0.005
UniRef50_B0P8A6 Transcription elongation factor n=1 Tax=Anaerotr...    42   0.006
UniRef50_B4RBL3 Transcription elongation factor GreA/GreB family...    42   0.006
UniRef50_Q8ZJH2 Transcription elongation factor greB n=165 Tax=P...    42   0.006
UniRef50_D1CSU3 Transcription elongation factor (Fragment) n=1 T...    42   0.007
UniRef50_D0WJ76 Transcription elongation factor n=1 Tax=Slackia ...    42   0.008
UniRef50_D1PEW3 Transcription elongation factor n=1 Tax=Prevotel...    42   0.008
UniRef50_Q725M4 Transcription elongation factor greA n=4 Tax=Des...    41   0.009
UniRef50_A6X2G5 GreA/GreB family elongation factor n=2 Tax=Ochro...    41   0.010
UniRef50_Q01RT9 GreA/GreB family elongation factor n=2 Tax=Acido...    41   0.010
UniRef50_A7HDS3 Transcription elongation factor GreB n=3 Tax=Myx...    41   0.012
UniRef50_C1CW74 Putative transcription elongation factor n=1 Tax...    41   0.013
UniRef50_D0LKY5 Transcription elongation factor n=1 Tax=Haliangi...    40   0.015
UniRef50_Q03RN4 Transcription elongation factor n=1 Tax=Lactobac...    40   0.020
UniRef50_D1CDC6 Transcription elongation factor n=1 Tax=Thermoba...    40   0.021
UniRef50_UPI0001C37CEA transcription elongation factor GreA n=1 ...    40   0.022
UniRef50_B2V1C0 Transcription elongation factor n=28 Tax=Clostri...    40   0.022
UniRef50_A0LK20 Transcription elongation factor greA n=1 Tax=Syn...    40   0.024
UniRef50_UPI0001C3129D transcription elongation factor GreA n=1 ...    40   0.026
UniRef50_Q817Z6 Transcription elongation factor greA n=141 Tax=c...    39   0.034
UniRef50_Q2Z001 Transcription elongation factor n=1 Tax=uncultur...    39   0.047
UniRef50_A0AIU5 Transcription elongation factor greA n=99 Tax=Ba...    39   0.047
UniRef50_A5V3E1 Transcription elongation factor greA n=13 Tax=Pr...    39   0.053
UniRef50_Q0BR49 Transcription elongation factor greB n=4 Tax=cel...    39   0.056
UniRef50_Q67JL1 Transcription elongation factor n=2 Tax=Clostrid...    39   0.062
UniRef50_A9WK05 Transcription elongation factor greA n=6 Tax=Chl...    39   0.062
UniRef50_C1F9R4 Transcription elongation factor GreA n=1 Tax=Aci...    39   0.063
UniRef50_B2S1W7 Transcription elongation factor greA n=6 Tax=Tre...    39   0.068

>UniRef50_P0AFW6 Regulator of nucleoside diphosphate kinase n=155
           Tax=Enterobacteriaceae RepID=RNK_ECO57
          Length = 136

 Score =  277 bits (709), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 136/136 (100%), Positives = 136/136 (100%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV
Sbjct: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
           KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE
Sbjct: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120

Query: 121 VLELEYQPEAAGDYLL 136
           VLELEYQPEAAGDYLL
Sbjct: 121 VLELEYQPEAAGDYLL 136


>UniRef50_C5S652 GreA/GreB family elongation factor n=2 Tax=Proteobacteria
           RepID=C5S652_CHRVI
          Length = 171

 Score =  129 bits (325), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 65/134 (48%), Positives = 86/134 (64%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
           S+P II++ LDAER++ L+E       P  D L AEL RA++  P EMP +VV+MNS V+
Sbjct: 37  SQPKIILSSLDAERLENLIESLPRNAFPGMDELEAELARAEVVDPREMPPNVVSMNSTVR 96

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           FR +S  E    TLVYP  M  S  ++S++APVG+ALLGL  GD I W  PGG    + +
Sbjct: 97  FRVMSTNEAFTLTLVYPKDMDASGGKISILAPVGSALLGLSSGDEIEWPKPGGGVLRVRI 156

Query: 122 LELEYQPEAAGDYL 135
            E+ YQPE AG+Y 
Sbjct: 157 EEVTYQPERAGEYF 170


>UniRef50_A6VVR5 GreA/GreB family elongation factor n=15 Tax=Proteobacteria
           RepID=A6VVR5_MARMS
          Length = 137

 Score =  121 bits (304), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 58/136 (42%), Positives = 88/136 (64%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           M RP I I+ LDA R++ +L+  +Y+  P  D L  E++RA++  P +MP ++VTMNS V
Sbjct: 2   MQRPQITISSLDAVRLEKILDSLSYSQFPNKDDLQEEINRAEIVEPRDMPDNIVTMNSTV 61

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
            F+ LS  +   +TLVYP     +   +SV+APVG+ALLGL+ GD I W  P G    + 
Sbjct: 62  TFKVLSSEKEFSKTLVYPKDANGAEDTVSVLAPVGSALLGLKEGDQIDWPKPNGDVLSVV 121

Query: 121 VLELEYQPEAAGDYLL 136
           +++++YQPE AG++ L
Sbjct: 122 IMKVDYQPERAGEFQL 137


>UniRef50_B8GS58 GreA/GreB family elongation factor n=22 Tax=Proteobacteria
           RepID=B8GS58_THISH
          Length = 137

 Score =  114 bits (285), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 59/131 (45%), Positives = 86/131 (65%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKF 62
           +P+I ++ LD +R++ LL+      L     L AEL+RA +  P ++P  +VTMNSRV+F
Sbjct: 4   QPSITLSSLDLDRLEHLLDSLPREALANHRQLLAELERANVVEPSQVPPTLVTMNSRVRF 63

Query: 63  RNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVL 122
           R   +G    RTLVYP+ M     ++SV+AP+G+ALLGL VGDSI W  P G   ++ ++
Sbjct: 64  RVEPEGREFQRTLVYPSGMDGDEEKISVLAPIGSALLGLSVGDSIAWPTPKGGEMNVRIM 123

Query: 123 ELEYQPEAAGD 133
           E+ YQPEAAG+
Sbjct: 124 EILYQPEAAGE 134


>UniRef50_Q3SMM4 GreA/GreB family elongation factor n=1 Tax=Thiobacillus
           denitrificans ATCC 25259 RepID=Q3SMM4_THIDA
          Length = 138

 Score =  114 bits (284), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 64/138 (46%), Positives = 83/138 (60%), Gaps = 9/138 (6%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPI----ADALNAELDRAQMCSPEEMPHDVVTMN 57
           +RP I +++ D ER++ +L     AGLP     A+AL  ELDRA++  PE MP DVVTMN
Sbjct: 5   TRPAITVSERDLERLEDML-----AGLPDDLPGAEALRDELDRAEILRPEAMPADVVTMN 59

Query: 58  SRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVAT 117
           SR++F     G+    TLVYP   T S  QL V  P G A+LGL VG  I W+ P G   
Sbjct: 60  SRIRFVVEPAGKEMEMTLVYPRDFTGSPDQLPVTTPAGIAVLGLAVGQEIEWQAPNGQKV 119

Query: 118 HLEVLELEYQPEAAGDYL 135
              +++L YQPE AGDY+
Sbjct: 120 GARIVDLAYQPERAGDYM 137


>UniRef50_Q6MQZ8 Regulator of nucleoside diphosphate kinase n=1 Tax=Bdellovibrio
           bacteriovorus RepID=Q6MQZ8_BDEBA
          Length = 138

 Score =  112 bits (280), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 58/133 (43%), Positives = 83/133 (62%), Gaps = 3/133 (2%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
           + P I++ D D  R+  L+ Q      P A+AL  EL RA + + +E+P +VVTMNSRV+
Sbjct: 7   TEPRILVTDQDFHRLSALVSQVEG---PFAEALEEELSRANVIAQKEIPKNVVTMNSRVQ 63

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           F +   G+    TLVYP        +LS++APVG ALLGL VG  I+W+LP G +  L+V
Sbjct: 64  FLDEVSGQESEMTLVYPQDAKLEEGRLSILAPVGIALLGLSVGQEINWKLPNGQSKKLKV 123

Query: 122 LELEYQPEAAGDY 134
             + YQPEA+G++
Sbjct: 124 QAVTYQPEASGNF 136


>UniRef50_B9MBQ3 GreA/GreB family elongation factor n=6 Tax=Betaproteobacteria
           RepID=B9MBQ3_DIAST
          Length = 135

 Score =  112 bits (280), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 64/131 (48%), Positives = 84/131 (64%), Gaps = 2/131 (1%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKF 62
           +P II++ LD ERI+ LLE+   A  P  +AL AELDRA +  P++MP +VVTMNS V+F
Sbjct: 4   KPHIILSSLDLERIEALLEK-QTAPFPGREALEAELDRADVFDPKDMPPNVVTMNSTVRF 62

Query: 63  RNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVL 122
             L  G+    TLVYP +M  S  ++SV APVG ALLGL VGD      P G  T + V 
Sbjct: 63  TLLETGKTNTLTLVYPKEMDGSGDKVSVFAPVGIALLGLGVGDEFQMPSPTGQVT-VRVD 121

Query: 123 ELEYQPEAAGD 133
            +++QPE AG+
Sbjct: 122 AIDFQPENAGE 132


>UniRef50_Q3BX42 Regulator of nucleoside diphosphate kinase n=9
           Tax=Gammaproteobacteria RepID=Q3BX42_XANC5
          Length = 146

 Score =  111 bits (278), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 58/131 (44%), Positives = 84/131 (64%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFR 63
           P+I+++  D  R++ LL+ PA+   P A AL+ EL RA++  P+++P DVVTM+SR++  
Sbjct: 11  PSILVSSHDLARLEALLDSPAFNKHPAATALSDELGRARVLPPDQIPGDVVTMHSRIECE 70

Query: 64  NLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLE 123
           +   GE    TLVYP +    + ++SV+APVG+ALLGL VG SI W  P G    L V  
Sbjct: 71  DQLHGERHTLTLVYPHEADVQHGRISVLAPVGSALLGLSVGQSIDWRTPDGRDLRLRVTA 130

Query: 124 LEYQPEAAGDY 134
           +  QP AAGD+
Sbjct: 131 VHDQPAAAGDF 141


>UniRef50_Q7MD62 Transcription elongation factor n=10 Tax=Proteobacteria
           RepID=Q7MD62_VIBVY
          Length = 135

 Score =  111 bits (277), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 57/132 (43%), Positives = 87/132 (65%), Gaps = 2/132 (1%)

Query: 5   TIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRN 64
           +I ++ LD +RI  LLE+ A    P  + L  ELDRA + +P++MP ++VTMNS V+F  
Sbjct: 6   SICVSTLDMDRISALLEKMANLS-PELEKLENELDRANVLAPQQMPDNIVTMNSTVRFTF 64

Query: 65  LSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
           +   +V  +TLVYP ++ + +  +S+ APVG+ALLGL VG  + W +PGG    +E+LE+
Sbjct: 65  VGSDKVMEKTLVYPDQVRNPD-DVSIFAPVGSALLGLSVGQQLTWPMPGGAERTIEILEV 123

Query: 125 EYQPEAAGDYLL 136
            YQPE  G++ L
Sbjct: 124 TYQPERMGEFHL 135


>UniRef50_Q2LTP9 Transcription elongation factor n=2 Tax=Deltaproteobacteria
           RepID=Q2LTP9_SYNAS
          Length = 134

 Score =  110 bits (276), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 61/136 (44%), Positives = 86/136 (63%), Gaps = 2/136 (1%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           M++  I + + D ER++ LLE    +    A +L AEL  A +   EEMP DVVTMNS V
Sbjct: 1   MNKRRIYVTEQDMERLEDLLETSKKS--EYARSLEAELVNAVVVPSEEMPPDVVTMNSCV 58

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
            F +L+ G     TLVYP +   ++ ++SV+APVG+AL+GL VG +I W +P G    L 
Sbjct: 59  CFEDLTTGNRETITLVYPGQANMASGRVSVLAPVGSALIGLSVGQTIEWPMPNGRKRRLR 118

Query: 121 VLELEYQPEAAGDYLL 136
           ++E+ YQPEAAGD+ L
Sbjct: 119 IVEVLYQPEAAGDFHL 134


>UniRef50_A4XNX9 GreA/GreB family elongation factor n=16 Tax=Bacteria
           RepID=A4XNX9_PSEMY
          Length = 135

 Score =  109 bits (273), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 65/131 (49%), Positives = 82/131 (62%), Gaps = 2/131 (1%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFR 63
           P I I  LD +R++ LL+     G P A AL AELDRA++   +E+P  +VTMNSRV  R
Sbjct: 5   PAITITRLDLQRLERLLDSLDEFG-PGAAALQAELDRAEVVGLDEVPAGLVTMNSRVHCR 63

Query: 64  NLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLE 123
             S G+    TLVYP       T +S++APVG+ALLGL VG  I W  PGG    L +L 
Sbjct: 64  EESSGKDYHLTLVYPQDAGGEGT-VSILAPVGSALLGLSVGQHIDWPAPGGKQLKLTLLA 122

Query: 124 LEYQPEAAGDY 134
           +EYQPEAAG+Y
Sbjct: 123 VEYQPEAAGEY 133


>UniRef50_A5F052 Regulator of nucleoside diphosphate kinase n=31 Tax=Vibrio
           RepID=A5F052_VIBC3
          Length = 135

 Score =  108 bits (271), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 60/130 (46%), Positives = 84/130 (64%), Gaps = 2/130 (1%)

Query: 5   TIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRN 64
           TI+++  D +RI  L++  A    P  + L  ELDRA +  P EMP DVVTMNS V+F+ 
Sbjct: 6   TIVVSTRDMDRISQLMDNLATLS-PELEKLEEELDRATVLEPAEMPEDVVTMNSTVRFKF 64

Query: 65  LSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
           L   EV  +TLVYP  +  S+  +S+ APVG+ALLGL VG  + W +PGG    LE++++
Sbjct: 65  LGSDEVMEKTLVYPNDV-KSSADVSIFAPVGSALLGLAVGQQLAWPMPGGTLKTLEIIDI 123

Query: 125 EYQPEAAGDY 134
            YQPE AG++
Sbjct: 124 VYQPERAGEF 133


>UniRef50_Q3K4S3 Regulator of nucleoside diphosphate kinase n=2 Tax=Pseudomonas
           fluorescens RepID=Q3K4S3_PSEPF
          Length = 136

 Score =  104 bits (260), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 60/135 (44%), Positives = 81/135 (60%), Gaps = 2/135 (1%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQ-MCSPEEMPHDVVTMNSR 59
           M+ P+I +  LD +R++ L++      LP   AL  ELDRA  +   +E+P DVVTMNSR
Sbjct: 1   MTAPSITLTRLDVQRLERLIDS-LDDTLPGVIALQTELDRADTLVGHDEVPADVVTMNSR 59

Query: 60  VKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHL 119
           V  R  S G+    TLVYP        ++S++APVG+ALLGL+VG  I W  PGG    L
Sbjct: 60  VHCREESSGKDYHLTLVYPKHANADEGKVSILAPVGSALLGLKVGQHIDWPAPGGKTLKL 119

Query: 120 EVLELEYQPEAAGDY 134
            +LE+E QP   GD+
Sbjct: 120 TLLEVESQPSNGGDF 134


>UniRef50_Q1H3Z9 GreA/GreB family elongation factor n=1 Tax=Methylobacillus
           flagellatus KT RepID=Q1H3Z9_METFK
          Length = 138

 Score =  103 bits (258), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 58/139 (41%), Positives = 85/139 (61%), Gaps = 4/139 (2%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIAD---ALNAELDRAQMCSPEEMPHDVVTMN 57
           M +  I +   D +R+  ++EQ    G P  D    L  EL R++    E++  DVVTMN
Sbjct: 1   MLQGAIQVTSFDMDRLFSMIEQLRKNGFPETDNLARLEDELARSEEVPSEQVGADVVTMN 60

Query: 58  SRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVAT 117
           SRV  R+ ++G     TLV+P+    S  ++SV+AP+G A+LG RVGD I W +PGGV  
Sbjct: 61  SRVLLRDEANGHEMSCTLVFPSDADASANRISVVAPLGTAILGYRVGDVIDWAMPGGVRQ 120

Query: 118 HLEVLELEYQPEAAGDYLL 136
           +  +L+++YQPEAAGD+ L
Sbjct: 121 Y-RILKIDYQPEAAGDFHL 138


>UniRef50_C9P6Y2 Regulator of nucleoside diphosphate kinase n=1 Tax=Vibrio
           metschnikovii CIP 69.14 RepID=C9P6Y2_VIBME
          Length = 136

 Score =  102 bits (253), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 55/129 (42%), Positives = 81/129 (62%), Gaps = 2/129 (1%)

Query: 6   IIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNL 65
           II++ LD +RI  L+++       + + L  ELDRA + +PEE+P DVVTMNS VKF+  
Sbjct: 8   IIVSTLDMDRISALMDKLPKLSKEL-ERLENELDRATVLNPEEIPADVVTMNSTVKFKFQ 66

Query: 66  SDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
              +V  +TLVYP  +   N  +S+ APVG+ALLGL  G  + W +P GV   +E++++ 
Sbjct: 67  GSDDVMQKTLVYPHDVK-GNDDISIFAPVGSALLGLSKGQQLTWPMPNGVERTIEIIDII 125

Query: 126 YQPEAAGDY 134
            QPE  G+Y
Sbjct: 126 DQPERNGEY 134


>UniRef50_B5EI69 GreA/GreB family elongation factor n=6 Tax=Desulfuromonadales
           RepID=B5EI69_GEOBB
          Length = 143

 Score = 99.4 bits (246), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 52/134 (38%), Positives = 85/134 (63%), Gaps = 4/134 (2%)

Query: 6   IIINDLDAERIDILLEQPAYAGLPIADALNA---ELDRAQMCSPEEMPHDVVTMNSRVKF 62
           +++ + D ER++ L+++        +  L     EL RA++  P  +P DV+TMNS+V  
Sbjct: 11  VVVTEFDMERLEALIDKARSTQTRDSKNLKELGEELVRAEVVDPAGIPPDVITMNSKVCL 70

Query: 63  RNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVL 122
           ++L   E  V TLV+P +   ++ ++S++APVG A++G R GD I W +PGG+  +L+V 
Sbjct: 71  QDLDSEEELVYTLVFPNEADLASGKISILAPVGTAMIGFRTGDRITWPVPGGMK-NLKVK 129

Query: 123 ELEYQPEAAGDYLL 136
           ++ YQPEAAGDY L
Sbjct: 130 KILYQPEAAGDYHL 143


>UniRef50_B5JTX6 Transcription elongation factor n=1 Tax=gamma proteobacterium
           HTCC5015 RepID=B5JTX6_9GAMM
          Length = 138

 Score = 98.2 bits (243), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 53/135 (39%), Positives = 80/135 (59%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
           + P I + +LD  RI+ LLE+           L  EL R ++ S +E+  DVVTMNSRVK
Sbjct: 4   THPPITLPELDVARIESLLEKLDLKAKNNHTELFEELYRCRIVSSQEVSPDVVTMNSRVK 63

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           +  L   +    TL YP +++ ++  +S++AP+G+A++GL VG  I W LP G    L +
Sbjct: 64  YTRLDTQQQSTLTLCYPDQISRADDAVSILAPIGSAIIGLSVGQIIDWPLPNGKNAPLRI 123

Query: 122 LELEYQPEAAGDYLL 136
            EL +QPE +G+Y L
Sbjct: 124 DELLFQPERSGNYTL 138


>UniRef50_B9NGJ6 Predicted protein n=12 Tax=cellular organisms RepID=B9NGJ6_POPTR
          Length = 145

 Score = 97.1 bits (240), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 55/136 (40%), Positives = 85/136 (62%), Gaps = 3/136 (2%)

Query: 2   SRP-TIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           SRP T+ + +LD  R++ +  +   A L   + L+A L+RA + SP+ +P DVVTMNSRV
Sbjct: 12  SRPATLYLTELDVTRLEGIASRAGTAELD--EMLDALLERAAIVSPDAIPKDVVTMNSRV 69

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
                 + + R  TLVYP     +  +LSV++P+G ALLG R GD++ + LP G A  + 
Sbjct: 70  VCALEGEAKPRDWTLVYPDDADLATGRLSVLSPIGQALLGARSGDTVDYRLPDGRAQRVT 129

Query: 121 VLELEYQPEAAGDYLL 136
           ++E+ +QPEA+G + L
Sbjct: 130 IVEIAFQPEASGQFTL 145


>UniRef50_C3X2V3 GreA/GreB family elongation factor n=2 Tax=Oxalobacter formigenes
           RepID=C3X2V3_OXAFO
          Length = 140

 Score = 97.1 bits (240), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 52/123 (42%), Positives = 74/123 (60%), Gaps = 1/123 (0%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKF 62
           RP I +   D ER++ +L    Y  +P    L  ELDRA +  PEE+P DV+T+NS  +F
Sbjct: 14  RPPITVTTHDYERLEQMLRNAKYRNIPGMADLQRELDRANVVEPEELPEDVITINSTARF 73

Query: 63  RNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVL 122
            +    +    TLVYP K  D  +++SV+APVG+ALLGL  G SI W++PG     L VL
Sbjct: 74  IDDCTNDQYEITLVYPDK-ADGVSKISVLAPVGSALLGLSAGQSIPWQVPGRQKLQLRVL 132

Query: 123 ELE 125
           +++
Sbjct: 133 DVK 135


>UniRef50_A1U1V6 GreA/GreB family elongation factor n=2 Tax=Marinobacter
           RepID=A1U1V6_MARAV
          Length = 128

 Score = 96.3 bits (238), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 53/125 (42%), Positives = 75/125 (60%), Gaps = 1/125 (0%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFR 63
           P I +++ D  R+  LLE+ A     +AD L  EL RA M    +MP  VVTMNSRV+F 
Sbjct: 5   PHITVSEEDYNRLSTLLERVAGQS-DVADGLEDELSRADMKPLADMPEGVVTMNSRVRFL 63

Query: 64  NLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLE 123
           N   GE     LVYP ++ D++ ++S++AP GAA+LGL +G SI W + G    HL+V+ 
Sbjct: 64  NEDTGEEHEVALVYPHEVGDADHKVSILAPAGAAMLGLSIGSSIEWPMKGRKPIHLKVIG 123

Query: 124 LEYQP 128
           +   P
Sbjct: 124 VTRNP 128


>UniRef50_A0LL17 GreA/GreB family elongation factor n=3 Tax=Bacteria
           RepID=A0LL17_SYNFM
          Length = 141

 Score = 93.2 bits (230), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 51/140 (36%), Positives = 79/140 (56%), Gaps = 6/140 (4%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADA-----LNAELDRAQMCSPEEMPHDVVTM 56
            R  I ++D D +R++ L+E  +       D      L  EL +A++ +   +P D VTM
Sbjct: 3   KRRKIYVSDYDMKRLEKLIELLSEDEWDDRDTKHLQVLEEELRKAEVVAARNIPRDTVTM 62

Query: 57  NSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVA 116
           NS+V+ ++L  G   +  LV+P +      ++SV+AP+G AL+G  VGD I W +P G  
Sbjct: 63  NSKVRVKDLDTGIETIYHLVFPGEADVKQNRISVLAPIGTALIGYAVGDVIQWNVPAG-T 121

Query: 117 THLEVLELEYQPEAAGDYLL 136
             L + E+ YQPEAAGD+ L
Sbjct: 122 KKLRIEEILYQPEAAGDFHL 141


>UniRef50_C6RP41 GreA/GreB family elongation factor n=4 Tax=Acinetobacter
           RepID=C6RP41_ACIRA
          Length = 134

 Score = 92.4 bits (228), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 51/134 (38%), Positives = 76/134 (56%), Gaps = 1/134 (0%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           M++P III+  D  R++ +LE  ++    I + L  EL RA++  P E+P +VV+MN+RV
Sbjct: 1   MAKPNIIISSQDLHRLETMLEHQSHMTQTI-EHLEDELARAEVVEPHEIPANVVSMNTRV 59

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
                   E     LVYP        Q++V+AP+GAA+LGL  G  I W  P G    ++
Sbjct: 60  LITIAPSTEPTEIQLVYPHDFRGDKGQVNVLAPIGAAILGLAEGQEIEWPQPDGHLMKVK 119

Query: 121 VLELEYQPEAAGDY 134
           + ++ YQPE  GDY
Sbjct: 120 IEKVLYQPEREGDY 133


>UniRef50_B0SEQ9 Transcription elongation factor n=2 Tax=Leptospira biflexa serovar
           Patoc RepID=B0SEQ9_LEPBA
          Length = 138

 Score = 90.9 bits (224), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 49/139 (35%), Positives = 79/139 (56%), Gaps = 7/139 (5%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADA----LNAELDRAQMCSPEEMPHDVVTMN 57
           ++  I I +LD  R+  ++ +  Y+     DA    L  E++RAQ    +++P +VVTMN
Sbjct: 3   TKKKISITNLDYIRLKKMILE--YSKRNKTDANVQDLLGEIERAQKVDSKQIPSNVVTMN 60

Query: 58  SRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVAT 117
           S ++ +NL   E +   LVYP        Q+S++AP+  A +G + GD I W +P GV  
Sbjct: 61  SVIEIKNLEGIEFKEFRLVYPEDSNLDQNQISILAPIATASIGYKTGDVIFWNVPDGVY- 119

Query: 118 HLEVLELEYQPEAAGDYLL 136
             ++ E++YQPEA GD+ L
Sbjct: 120 RFQITEIKYQPEANGDFHL 138


>UniRef50_B8G0E1 GreA/GreB family elongation factor n=2 Tax=Desulfitobacterium
           hafniense RepID=B8G0E1_DESHD
          Length = 138

 Score = 90.9 bits (224), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 47/103 (45%), Positives = 66/103 (64%), Gaps = 1/103 (0%)

Query: 34  LNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAP 93
           L  EL+ A +   E++P + +TMNSR+  ++L  GE  V TLVYP        ++S++AP
Sbjct: 37  LEHELNGADVVPSEKIPGNAITMNSRILLKDLETGEETVYTLVYPEDADLLEDKISILAP 96

Query: 94  VGAALLGLRVGDSIHWELPGGVATHLEVLELEYQPEAAGDYLL 136
           VG A+LG   GD I W++PGGV    +V ++ YQPEAAGDY L
Sbjct: 97  VGTAILGYLEGDIIDWKVPGGV-VRFKVEKILYQPEAAGDYHL 138


>UniRef50_B3PF63 Regulator of nucleoside diphosphate kinase n=1 Tax=Cellvibrio
           japonicus Ueda107 RepID=B3PF63_CELJU
          Length = 180

 Score = 89.0 bits (219), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 44/124 (35%), Positives = 78/124 (62%), Gaps = 3/124 (2%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
           +  +++I++ D +R+  L+E       P A+AL+ E+ RA + +  ++P DVV M+S V 
Sbjct: 57  TETSLVISNSDYQRLVQLIEDNDS---PAAEALDIEIGRATLVADAQLPADVVAMDSEVT 113

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           F +L  GE +   LV+PA+      ++S+++PVG+AL+GLR+G SI W +P G    L+V
Sbjct: 114 FEDLDSGEQKTIQLVFPAQANVDQLKISILSPVGSALIGLRIGSSIDWPVPQGKVRRLKV 173

Query: 122 LELE 125
           + ++
Sbjct: 174 IAVK 177


>UniRef50_Q11P04 Transcription elongation factor n=1 Tax=Cytophaga hutchinsonii ATCC
           33406 RepID=Q11P04_CYTH3
          Length = 149

 Score = 88.6 bits (218), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 51/134 (38%), Positives = 78/134 (58%), Gaps = 6/134 (4%)

Query: 7   IINDLDAERIDILL-EQPAYAGLPI--ADALNAELDRAQMCSPEEMPHDVVTMNSRVKFR 63
           IIN LD  RI   + E   +  + +  A++L  EL   ++  PEE+P++VVTM+S V   
Sbjct: 18  IINKLDYSRIQQCINEAKQFKSISVVEANSLMNELKLGKLVEPEEIPNNVVTMHSIVTIV 77

Query: 64  NLSDGEVRVR-TLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVL 122
              D   RV   LVYP K    N ++S+ +P+  AL+G ++GD I W +P G+ T +++ 
Sbjct: 78  -FMDSNKRVEFQLVYPDKADVKNNKISIFSPIATALIGYQIGDEIEWCVPAGM-TKIKIE 135

Query: 123 ELEYQPEAAGDYLL 136
            + YQPEAAG + L
Sbjct: 136 SIAYQPEAAGHFNL 149


>UniRef50_A6GQE5 Nucleoside diphosphate kinase regulator n=1 Tax=Limnobacter sp.
           MED105 RepID=A6GQE5_9BURK
          Length = 122

 Score = 87.0 bits (214), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 48/127 (37%), Positives = 64/127 (50%), Gaps = 7/127 (5%)

Query: 8   INDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSD 67
           +N+LD  RI  L         P    LNA LD A+   P+++P DVVTMNS         
Sbjct: 1   MNELDLARISKL-------NAPFPPELNAALDNAEFIKPQDIPADVVTMNSLFTIVETES 53

Query: 68  GEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQ 127
           G      L YP+    +   +SV++PVGA+LLG + G    W  P G      V E+ +Q
Sbjct: 54  GSTNKLMLCYPSDAEPAKGYISVLSPVGASLLGRKAGTVAQWATPNGEQHFAVVKEILFQ 113

Query: 128 PEAAGDY 134
           PEA+GDY
Sbjct: 114 PEASGDY 120


>UniRef50_A4BB58 Nucleoside diphosphate kinase regulator n=1 Tax=Reinekea blandensis
           MED297 RepID=A4BB58_9GAMM
          Length = 142

 Score = 86.3 bits (212), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 48/123 (39%), Positives = 74/123 (60%), Gaps = 3/123 (2%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKF 62
           +P + I++ D +R+  L+    Y      D L +ELDRA +C P E+P D V + S V+F
Sbjct: 5   KPDVFISEHDWQRLQRLVAH--YPDHEAIDWLESELDRATVCLPNELPADAVQLGSVVRF 62

Query: 63  RNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVL 122
           +  S G+V +R LV P +    +  +SV++PVG ALLGLRVGD I W    G +T + +L
Sbjct: 63  QLSSSGQVYLRELVLPEQ-RQHDEHISVLSPVGMALLGLRVGDEIAWPSSPGQSTTVRIL 121

Query: 123 ELE 125
           +++
Sbjct: 122 DVK 124


>UniRef50_A6C278 Nucleoside diphosphate kinase regulator protein, putative n=1
           Tax=Planctomyces maris DSM 8797 RepID=A6C278_9PLAN
          Length = 137

 Score = 85.5 bits (210), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 51/136 (37%), Positives = 73/136 (53%), Gaps = 6/136 (4%)

Query: 1   MSRPTIIINDLDAERIDILL---EQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMN 57
           M +  I I   D +R+  LL      A    P    L+AEL  A +   EE+P D+VTMN
Sbjct: 1   MPQQKIFITKTDYQRLQNLLLSDFTQAIGNKPYLSGLHAELAVAHIVESEEIPADIVTMN 60

Query: 58  SRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWE-LPGGVA 116
           S V+ R+L   E+   TLVYP        +LS++ P+G A+LG R+GD +    L GG  
Sbjct: 61  STVRLRDLETDELETYTLVYPQDANIKEGKLSILTPIGTAILGYRIGDQLRSRALAGG-- 118

Query: 117 THLEVLELEYQPEAAG 132
           + + V E+ +QPE +G
Sbjct: 119 SKIRVEEILFQPERSG 134


>UniRef50_B2SQJ5 Regulator of nucleoside diphosphate kinase n=8 Tax=Xanthomonadaceae
           RepID=B2SQJ5_XANOP
          Length = 215

 Score = 84.0 bits (206), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 47/130 (36%), Positives = 73/130 (56%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFR 63
           P+ +++  D  R + LL+ P++   P A AL+ EL RA++  P+++  DVVTM+SR++  
Sbjct: 83  PSTLVSSHDLARREALLDSPSFNKHPAATALSDELGRARVLPPDQIRGDVVTMHSRIECE 142

Query: 64  NLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLE 123
           +   G       V+P +    + ++ V+APVG+AL GL VG  I W  P G    L    
Sbjct: 143 DQLHGGRHTLPPVHPHEADVQHGRICVLAPVGSALGGLSVGQRIDWRTPDGRDLRLRATA 202

Query: 124 LEYQPEAAGD 133
           +  QP AAGD
Sbjct: 203 VHDQPTAAGD 212


>UniRef50_A9MBQ4 GreA/GreB family elongation factor n=36 Tax=Brucella
           RepID=A9MBQ4_BRUC2
          Length = 169

 Score = 84.0 bits (206), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 46/123 (37%), Positives = 73/123 (59%), Gaps = 1/123 (0%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
            +P I+++++D ER+  L    +     IA+ L AELDRA++ + + +P +VV M S V+
Sbjct: 7   KKPNIVVSEVDYERLMGLASNASERFEEIAEELMAELDRAKVVTAKRIPENVVQMGSTVE 66

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           FR  +DG  R  TLVYP +   +  ++S++ P+G AL+GL  G SI W    G    L V
Sbjct: 67  FR-ANDGHERRVTLVYPGEADIAKNRISILTPIGTALIGLAPGQSISWTARDGKQHELNV 125

Query: 122 LEL 124
           L++
Sbjct: 126 LKV 128


>UniRef50_A9GAI2 Regulator of nucleoside diphosphate kinase n=1 Tax=Sorangium
           cellulosum 'So ce 56' RepID=A9GAI2_SORC5
          Length = 140

 Score = 82.4 bits (202), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 48/133 (36%), Positives = 75/133 (56%), Gaps = 6/133 (4%)

Query: 6   IIINDLDAERIDILLE----QPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
           I++ + D +R+  LLE    +P     P  +AL  E++RA +  P ++P +VVTMNSRV+
Sbjct: 8   IVLTEFDRDRLARLLEALRARPG-GDSPNLEALEIEIERADVVKPADIPPNVVTMNSRVE 66

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
             +L   E    T+V+P      + ++SV+AP+G ALLG R  D + W  P      L +
Sbjct: 67  LVDLDTEERLCVTVVFPGNADVKSGRISVLAPMGLALLGCREADEVEWPTPSRT-RRLRI 125

Query: 122 LELEYQPEAAGDY 134
             + YQPEA+G +
Sbjct: 126 ERIAYQPEASGRF 138


>UniRef50_A1TUC9 GreA/GreB family elongation factor n=4 Tax=Burkholderiales
           RepID=A1TUC9_ACIAC
          Length = 136

 Score = 81.3 bits (199), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 71/129 (55%), Gaps = 5/129 (3%)

Query: 7   IINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLS 66
           ++ DLD  R+  L  Q      P   +L   L+ A + S   +  DVVTM SRV+  + +
Sbjct: 12  VLTDLDFARLSRLASQQ-----PAPPSLADLLENADVTSSRTVEADVVTMYSRVELVDTA 66

Query: 67  DGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
            G  +V T+ YP     +   +SV++PVG++LLGLRVG +  W  P G A    V  +++
Sbjct: 67  TGARQVLTICYPRDADLAAGFVSVLSPVGSSLLGLRVGQTARWCTPRGEACEATVAGIQH 126

Query: 127 QPEAAGDYL 135
           QPEA GDYL
Sbjct: 127 QPEAEGDYL 135


>UniRef50_A6X582 GreA/GreB family elongation factor n=3 Tax=Rhizobiales
           RepID=A6X582_OCHA4
          Length = 142

 Score = 80.5 bits (197), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 75/129 (58%), Gaps = 1/129 (0%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKF 62
           +P I+++++D ER+  L    +     IA+ L  ELDRA++   + +P +V+ M S V+F
Sbjct: 8   KPNIVVSEIDYERLMGLATNVSERLEEIAEELMVELDRAKVVPAKRLPQNVIHMGSTVEF 67

Query: 63  RNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVL 122
           R+ +DG+ R  TLVYP +   +  ++S++ P+G AL+GL  G SI W    G    L VL
Sbjct: 68  RS-NDGQERRVTLVYPGEADIAQGKISILTPIGTALIGLAPGQSISWTARDGKQHELNVL 126

Query: 123 ELEYQPEAA 131
            +  + + +
Sbjct: 127 SVSNEAQVS 135


>UniRef50_D1SYS0 GreA/GreB family elongation factor n=1 Tax=Acidovorax avenae subsp.
           avenae ATCC 19860 RepID=D1SYS0_9BURK
          Length = 139

 Score = 80.5 bits (197), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 55/139 (39%), Positives = 74/139 (53%), Gaps = 9/139 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           +  P  ++ DLD  R+  L    A   LP A +L   L  A +     +  DVVTMNSRV
Sbjct: 5   LPHPERVLTDLDFARLSKL----AARQLPPA-SLADLLATADVTGSRAVDADVVTMNSRV 59

Query: 61  KFR----NLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVA 116
           +      + +DG  +V TL YP     +  ++SV++PVG +LLGLRVGD   W  P G  
Sbjct: 60  ELEGSGTDGADGARQVLTLCYPQDADAAAGRVSVLSPVGCSLLGLRVGDVAAWRTPQGED 119

Query: 117 THLEVLELEYQPEAAGDYL 135
               V  + +QPEAAGDYL
Sbjct: 120 CRATVAAILHQPEAAGDYL 138


>UniRef50_C6X5Q8 Transcription elongation factor n=1 Tax=Flavobacteriaceae bacterium
           3519-10 RepID=C6X5Q8_FLAB3
          Length = 170

 Score = 80.5 bits (197), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 49/132 (37%), Positives = 74/132 (56%), Gaps = 4/132 (3%)

Query: 6   IIINDLDAERI-DILLEQPAYAGLPIADA--LNAELDRAQMCSPEEMPHDVVTMNSRVKF 62
           III   D+ RI   +++      +   DA  L  EL  A++    ++P DVVTMNS VK 
Sbjct: 38  IIITKQDSTRIHKSIMDAKKNNSIKAEDAERLLRELHSAKIVESADIPADVVTMNSVVKI 97

Query: 63  RNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVL 122
              ++  V    +VYP +    + ++S+ +PV AAL+G  V D I W +P G+ T + + 
Sbjct: 98  HFENNKTVTEFKIVYPEQANIKDRKISIFSPVAAALIGYSVNDEIDWIVPSGM-TKIIID 156

Query: 123 ELEYQPEAAGDY 134
           E+ YQPEAAGD+
Sbjct: 157 EIIYQPEAAGDF 168


>UniRef50_A7HAZ2 GreA/GreB family elongation factor n=5 Tax=Myxococcaceae
           RepID=A7HAZ2_ANADF
          Length = 138

 Score = 79.3 bits (194), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 52/122 (42%), Positives = 71/122 (58%), Gaps = 3/122 (2%)

Query: 2   SRPTIIINDLDAERIDILLEQP-AYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           +R  I +   D +R+  L++Q  A      A+ L+AELDRA     E  P D+VTMN+RV
Sbjct: 3   ARKPIHVTHADLDRLRALVDQHLAGRDARAAEQLDAELDRAVPI--EVAPPDLVTMNARV 60

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
            F +L+ G  R   LVYP     +  ++SV+AP+GAALLGL VG+ I W LP G    L 
Sbjct: 61  AFVDLASGVRRELVLVYPRDADVAAGRVSVLAPIGAALLGLSVGEEIDWPLPDGRVARLR 120

Query: 121 VL 122
           +L
Sbjct: 121 IL 122


>UniRef50_A9EFF1 GreA/GreB family elongation factor n=1 Tax=Oceanibulbus indolifex
           HEL-45 RepID=A9EFF1_9RHOB
          Length = 146

 Score = 77.8 bits (190), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 44/127 (34%), Positives = 73/127 (57%), Gaps = 1/127 (0%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFR 63
           P +I+N  D   ++ L E   +    +AD    E+ RAQ+   ++MP DVV + S+V +R
Sbjct: 16  PHLILNAADLVHLEELAEGMMHRHPTLADRFFEEIGRAQIVEDQQMPGDVVGIGSKVTYR 75

Query: 64  NLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATH-LEVL 122
           + + G+ +  TLVYP     + +Q+SV+ P+G ALLGLR G S +W+       H L +L
Sbjct: 76  DETTGQNKSVTLVYPEDADITRSQVSVITPIGVALLGLREGASFYWDTRRENQRHMLTIL 135

Query: 123 ELEYQPE 129
           ++E + +
Sbjct: 136 KVEQRSD 142


>UniRef50_Q5QX12 Transcription elongation factor family protein n=1 Tax=Idiomarina
           loihiensis RepID=Q5QX12_IDILO
          Length = 129

 Score = 77.8 bits (190), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 45/118 (38%), Positives = 68/118 (57%), Gaps = 5/118 (4%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLP--IADALNAELDRAQMCSPEEMPHDVVTMNSR 59
           +RP I+I+ +D   I+  L++     LP    D L  EL RA++  P  MP +V  +N +
Sbjct: 7   TRPNIVISCVDMAVIEHHLDE---TRLPREFLDELEVELARAKIVEPNVMPANVACLNRQ 63

Query: 60  VKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVAT 117
           V F+ L  G+V  +TL  P ++   +  LSV AP+GAAL+GL VG SI W+   G+ +
Sbjct: 64  VTFKVLETGKVFTKTLTAPDQVDKYDDSLSVFAPLGAALIGLSVGQSIQWKTNRGLQS 121


>UniRef50_B7L307 GreA/GreB family elongation factor n=1 Tax=Methylobacterium
           chloromethanicum CM4 RepID=B7L307_METC4
          Length = 147

 Score = 77.4 bits (189), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 42/98 (42%), Positives = 57/98 (58%)

Query: 34  LNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAP 93
           L  ELDRA +  P  +P  VVTM++RV++R+    +VR  TL YP +     + +SV+ P
Sbjct: 43  LAEELDRATVVPPGAVPPRVVTMHARVEYRDDVTDQVRCVTLTYPGEEDAYASGISVLTP 102

Query: 94  VGAALLGLRVGDSIHWELPGGVATHLEVLELEYQPEAA 131
           VGAAL+GL  G SI W  P G    L VL + + P  A
Sbjct: 103 VGAALVGLSEGHSIRWRTPSGGLRGLTVLRVRFAPHHA 140


>UniRef50_A7HFE1 GreA/GreB family elongation factor n=1 Tax=Anaeromyxobacter sp.
           Fw109-5 RepID=A7HFE1_ANADF
          Length = 164

 Score = 77.4 bits (189), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 8/139 (5%)

Query: 6   IIINDLDAERIDILLEQPAYAGLPIADA--------LNAELDRAQMCSPEEMPHDVVTMN 57
           +++ + DA R+   L + +   +  ADA        L   L  A +  P+ +P +VVTM 
Sbjct: 26  LLLTEQDAARLRATLARASLESMASADARGENAVELLATALRSAIVVPPDRIPAEVVTMR 85

Query: 58  SRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVAT 117
           SR+   +++ G  R   LVYP +       +SV++PVG ALLGL  G  + W LP G   
Sbjct: 86  SRLVLEDVASGARREVVLVYPEEERTHEGHVSVLSPVGVALLGLSEGALVGWPLPSGRTA 145

Query: 118 HLEVLELEYQPEAAGDYLL 136
            L+V  ++YQPEA  ++ L
Sbjct: 146 VLQVESVQYQPEAVEEFHL 164


>UniRef50_Q5P744 Transcription elongation factor n=3 Tax=Proteobacteria
           RepID=Q5P744_AZOSE
          Length = 158

 Score = 77.0 bits (188), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 42/94 (44%), Positives = 59/94 (62%)

Query: 34  LNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAP 93
           L AEL+RA +  P+ +P  VVTM+SRV++ + + GE R   +VYP +   +  ++SV AP
Sbjct: 58  LRAELERAVVVPPDFLPRHVVTMHSRVRYLDEASGEQREIQVVYPEEADVAAGKVSVFAP 117

Query: 94  VGAALLGLRVGDSIHWELPGGVATHLEVLELEYQ 127
           VGAALLGL V   I W+ P G    L V E+ +Q
Sbjct: 118 VGAALLGLSVDQVIEWDFPRGPRRRLRVEEVLHQ 151


>UniRef50_Q4KB20 Acetyltransferase, GNAT family family n=9 Tax=Bacteria
           RepID=Q4KB20_PSEF5
          Length = 379

 Score = 75.9 bits (185), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 47/131 (35%), Positives = 74/131 (56%), Gaps = 6/131 (4%)

Query: 6   IIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNL 65
           I I ++D  R++ L+    +   P    L  EL+RA +  P+++  +V+TMNSR     L
Sbjct: 255 IYITEIDKARLESLI---VFEQGPTIVELEHELERAIVVKPQQVARNVITMNSRALL-QL 310

Query: 66  SDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
            D E+ V  LVYP     +  + SV + +GAA+LG + GD+I W +       +E+ ++ 
Sbjct: 311 DDEEIEV-ALVYPEDADSTAGKHSVYSDIGAAILGYQEGDTIDWRI-SDRTRRIEIRKVL 368

Query: 126 YQPEAAGDYLL 136
           YQPEAAGD+ L
Sbjct: 369 YQPEAAGDFHL 379


>UniRef50_Q13WN5 GreA/GreB family elongation factor n=50 Tax=Burkholderia
           RepID=Q13WN5_BURXL
          Length = 136

 Score = 75.5 bits (184), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 45/132 (34%), Positives = 73/132 (55%), Gaps = 1/132 (0%)

Query: 5   TIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRN 64
           T  + +LD  R++     P  A   + D L+  L+RA +    E+P +VVTMNS+    +
Sbjct: 6   TCYLTELDVARLEKHAAAPG-ADARLQDMLDDVLERAVIVDSHEIPANVVTMNSQATLVD 64

Query: 65  LSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
            + GE    T+VYP     ++ +L+V +P G ALLG + G+ I +  P G    L++ ++
Sbjct: 65  ETSGEHMTWTVVYPPNADFAHGRLNVFSPAGLALLGAKRGERIRFTPPSGTEKVLKLEKI 124

Query: 125 EYQPEAAGDYLL 136
            +QPEAA D+ L
Sbjct: 125 LFQPEAADDFTL 136


>UniRef50_B8IFL5 GreA/GreB family elongation factor n=8 Tax=Methylobacterium
           RepID=B8IFL5_METNO
          Length = 141

 Score = 75.5 bits (184), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 44/123 (35%), Positives = 65/123 (52%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKF 62
           +P I +   D ER+  L          +A  L  ELDRAQ+ +        V M  +V+F
Sbjct: 14  KPRIKMTVEDHERLSALAAAAQDRMPDVASCLADELDRAQIVAGRGRLPPFVRMGCQVEF 73

Query: 63  RNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVL 122
           R+ + G V++ TLVYP +      ++SV+ P+GAAL+GL  G SI WE   G+   L VL
Sbjct: 74  RDDTTGRVQIVTLVYPGEANIEQGKISVLTPIGAALIGLSTGQSITWETRSGLTKSLTVL 133

Query: 123 ELE 125
           ++ 
Sbjct: 134 DVR 136


>UniRef50_Q2GA51 GreA/GreB family elongation factor n=1 Tax=Novosphingobium
           aromaticivorans DSM 12444 RepID=Q2GA51_NOVAD
          Length = 159

 Score = 74.7 bits (182), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 36/80 (45%), Positives = 52/80 (65%)

Query: 30  IADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLS 89
           I+  L  E+ RAQ+   +++P D V M S V+FR+ + G VR  TLVYPA+   +  ++S
Sbjct: 57  ISRMLMEEIGRAQIVPAQDLPPDAVAMRSVVRFRDEATGAVRTVTLVYPAEADIAQDRVS 116

Query: 90  VMAPVGAALLGLRVGDSIHW 109
           ++ PVGA L+GLR G SI W
Sbjct: 117 ILTPVGAGLIGLRAGQSIDW 136


>UniRef50_C6XWY5 Transcription elongation factor GreA/GreB domain protein n=1
           Tax=Pedobacter heparinus DSM 2366 RepID=C6XWY5_PEDHD
          Length = 125

 Score = 74.3 bits (181), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 36/93 (38%), Positives = 54/93 (58%), Gaps = 1/93 (1%)

Query: 32  DALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVM 91
           + L AEL  A + + EE+P DVV + S  +  N+  G+     LV P +      ++SV 
Sbjct: 31  EKLQAELKAATIYTEEELPSDVVCLKSEARIANVKTGKEFTFKLVMPEEANIKAQKVSVF 90

Query: 92  APVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
           AP+G AL G R GDSI+WE+P G+    ++LE+
Sbjct: 91  APIGIALFGYRTGDSINWEMPDGI-QEFKILEV 122


>UniRef50_Q0BZP7 Regulatory protein n=1 Tax=Hyphomonas neptunium ATCC 15444
           RepID=Q0BZP7_HYPNA
          Length = 128

 Score = 74.3 bits (181), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 47/125 (37%), Positives = 72/125 (57%), Gaps = 4/125 (3%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           ++RP I + D + ER+  L         P AD L  EL RA++ + E++P DVV M+ RV
Sbjct: 4   ITRPPIYVTDAELERLSDL-AHAVQGREPAADMLIEELSRARVTAVEDVPVDVVRMHDRV 62

Query: 61  KFRNLSDG-EVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHL 119
            F  + DG      TLVYP +   ++ ++S++  VGA L+GL+VGD++ W    G    +
Sbjct: 63  NF--VYDGARYEDFTLVYPYEANIADKRISILTQVGAMLIGLQVGDAMQWAGRDGRGHSM 120

Query: 120 EVLEL 124
           EVLE+
Sbjct: 121 EVLEV 125


>UniRef50_C0N448 Putative uncharacterized protein n=1 Tax=Methylophaga thiooxidans
           DMS010 RepID=C0N448_9GAMM
          Length = 137

 Score = 73.6 bits (179), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 73/135 (54%), Gaps = 2/135 (1%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           + +P I +  LD  R++ L+        P+  +L  EL+RA++    ++P D+V+MNS V
Sbjct: 2   IHQPDIYVASLDLIRLEDLINTLWNKHSPVRLSLEDELERAKIIDSFQLPDDIVSMNSTV 61

Query: 61  K-FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHL 119
           + +   SD  V + TLVYP  M    + LS+++P+G ALLG++ G+  +W    G     
Sbjct: 62  ELWVTKSDFPVYM-TLVYPYGMKKDGSTLSILSPIGTALLGIKQGEEFYWPGRDGRNIKA 120

Query: 120 EVLELEYQPEAAGDY 134
            +  + YQPE    Y
Sbjct: 121 RLENILYQPERERHY 135


>UniRef50_A8LN19 GreA/GreB family elongation factor n=8 Tax=Alphaproteobacteria
           RepID=A8LN19_DINSH
          Length = 148

 Score = 73.2 bits (178), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/131 (35%), Positives = 66/131 (50%), Gaps = 2/131 (1%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKF 62
           RP I+IN  D   I+ L E        +AD L  E+ RA++    +MP +V+ +     F
Sbjct: 18  RPRIVINADDLSHIEALAEGAMDRNPALADRLLEEIARARIVPAAKMPLNVIGIGKSATF 77

Query: 63  RNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVL 122
           R+ + G+ R  TLVYP     S  ++SVM P+G ALLGL  G   HW   G     L V+
Sbjct: 78  RDETTGQERTVTLVYPEDADISRARVSVMTPIGVALLGLAEGAVFHWNTRGEERRMLTVI 137

Query: 123 ELE--YQPEAA 131
            +     PE+A
Sbjct: 138 RVSDPAAPESA 148


>UniRef50_A6EIL5 Nucleoside diphosphate kinase regulator protein, putative n=1
           Tax=Pedobacter sp. BAL39 RepID=A6EIL5_9SPHI
          Length = 129

 Score = 73.2 bits (178), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 52/83 (62%)

Query: 33  ALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMA 92
           +L+AEL RA + S EE P D + +NS V+ ++ S GE+    +V P        ++SV+ 
Sbjct: 34  SLSAELSRAVILSNEEFPSDAIRLNSTVRIQDESTGEIMELIIVLPQHANIKEKKISVLT 93

Query: 93  PVGAALLGLRVGDSIHWELPGGV 115
           P+ AAL+G R GD++ W++P G+
Sbjct: 94  PIAAALIGFRQGDAVQWKVPAGL 116


>UniRef50_Q74EX3 Nucleoside diphosphate kinase regulator protein, putative n=1
           Tax=Geobacter sulfurreducens RepID=Q74EX3_GEOSL
          Length = 135

 Score = 71.6 bits (174), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 76/135 (56%), Gaps = 3/135 (2%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           M    I + + D  R++ +L+   +        L  EL  A +  P+++P +VVTMNSRV
Sbjct: 1   MDTRAIYVTEDDLSRLEEILDTIPFRDRKDLQKLEDELASAMIVDPKDVPPNVVTMNSRV 60

Query: 61  KFRNL-SDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHL 119
           K R+L +D E+ + +LV+P     +  ++S+++P+G A+LG   GD++   +    A  +
Sbjct: 61  KLRDLRADKEMTI-SLVFPNDANIAEGKISILSPIGTAILGFGAGDTLDLAV-RSFAKKI 118

Query: 120 EVLELEYQPEAAGDY 134
            + E+ YQP AAG +
Sbjct: 119 RIEEVLYQPGAAGSH 133


>UniRef50_C0A6F4 GreA/GreB family elongation factor n=1 Tax=Opitutaceae bacterium
           TAV2 RepID=C0A6F4_9BACT
          Length = 148

 Score = 68.6 bits (166), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 37/96 (38%), Positives = 55/96 (57%), Gaps = 2/96 (2%)

Query: 34  LNAELDRAQMCSPEE-MPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMA 92
           L AE DRA +   +  MP  VVT++  V+ ++L   E+   TL  P        ++S++A
Sbjct: 37  LRAEFDRALIIEDDTAMPDGVVTLHCEVRLQDLDTNEIETYTLTLPEHADPEAHRISILA 96

Query: 93  PVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQP 128
           P+G ALLG +V + + WE+PGG A  L +LE   QP
Sbjct: 97  PIGTALLGYQVDNVVTWEMPGG-ARRLRILEARRQP 131


>UniRef50_A7IJH2 GreA/GreB family elongation factor n=4 Tax=Rhizobiales
           RepID=A7IJH2_XANP2
          Length = 143

 Score = 67.8 bits (164), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/123 (36%), Positives = 68/123 (55%), Gaps = 4/123 (3%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLP-IADALNAELDRAQMCSPEEMPHDVVTMNSRVKF 62
           P ++++  D ER+   L   A   +P +A+ L AELDRA++     +P   V M S+V +
Sbjct: 16  PALVLSHPDHERL-AGLATAALDRIPDVAEELLAELDRARLVPIGRVPATAVQMGSKVTY 74

Query: 63  RNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVL 122
              + G  R  TLVYP     +  ++SVM P+GAAL+GL  G SI W    G    L+V+
Sbjct: 75  E--AGGNARTVTLVYPEDADIAAARVSVMTPIGAALIGLSKGQSICWTARDGRRHELKVI 132

Query: 123 ELE 125
           E++
Sbjct: 133 EVQ 135


>UniRef50_Q15Z69 GreA/GreB family elongation factor n=1 Tax=Pseudoalteromonas
           atlantica T6c RepID=Q15Z69_PSEA6
          Length = 128

 Score = 67.4 bits (163), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 70/126 (55%), Gaps = 8/126 (6%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLPIADALNA---ELDRAQMCSPEEMPHDVVTMNSR 59
           +P III+  D   ++  LE+   + LP  DA+ A   ELDRA + + +++P +VV + S+
Sbjct: 4   QPDIIISTADLAELEYQLER---SKLP-DDAIRAIENELDRATIVACKDLPENVVAIGSQ 59

Query: 60  VKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHL 119
           V F+ L   +V  + L  P         +SV AP+G+AL+GL  G  I W+   G    +
Sbjct: 60  VTFKILDSQKVFTKALCLPHDSVKFEDSISVFAPIGSALIGLSTGQCIKWQTQRG-QQSV 118

Query: 120 EVLELE 125
           E++++E
Sbjct: 119 EIIKVE 124


>UniRef50_B0T793 GreA/GreB family elongation factor n=1 Tax=Caulobacter sp. K31
           RepID=B0T793_CAUSK
          Length = 141

 Score = 67.4 bits (163), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 60/108 (55%), Gaps = 1/108 (0%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
           ++PTI + + D E +  L + PA         L  E+ RA +  P + P   V + SR+ 
Sbjct: 18  AQPTIYVTEQDFEILSNLADAPAGRAFG-GRVLAHEMARALIVEPGQAPLPFVRIGSRID 76

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHW 109
           +R+LS+G+ R   L  P   +  + ++SV++PVGAAL+G+  G + HW
Sbjct: 77  YRDLSNGQTRSVRLSLPRDASIDDNRISVLSPVGAALVGMTAGQAFHW 124


>UniRef50_C6WYK0 GreA/GreB family elongation factor n=2 Tax=Methylophilaceae
           RepID=C6WYK0_METML
          Length = 125

 Score = 66.6 bits (161), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 66/124 (53%), Gaps = 9/124 (7%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           M    +I++D D  R+ +L            + L  EL RA +   +++P DVV +NSRV
Sbjct: 2   MEIDKLILSDQDYARLSMLAND---------ELLGDELSRAIVVPADQVPADVVRINSRV 52

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
            + + S G  R   LV+P        ++SV++PVG+ALLGL+ G  I W  P G +  L+
Sbjct: 53  IYLDESSGLSREVELVFPEGADLKFGKISVLSPVGSALLGLKEGQVIDWPFPHGQSRRLK 112

Query: 121 VLEL 124
           V+ +
Sbjct: 113 VVSV 116


>UniRef50_C7CFG6 Putative regulator n=1 Tax=Methylobacterium extorquens DM4
           RepID=C7CFG6_METED
          Length = 149

 Score = 65.9 bits (159), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 40/104 (38%), Positives = 56/104 (53%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFR 63
           P I +   D +R+          G   AD L  EL RA +C P  +P +VV++N RV +R
Sbjct: 8   PPITVTTRDFDRLVAFSLDAHLRGDSHADFLLWELKRATLCPPCALPSEVVSVNCRVLYR 67

Query: 64  NLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSI 107
              +  VRV  L +P  + +    LSV +P+G ALLGLRVGD +
Sbjct: 68  LDDEPGVRVHLLAHPDDLINLADGLSVASPLGTALLGLRVGDRM 111


>UniRef50_A5VGM9 GreA/GreB family elongation factor n=1 Tax=Sphingomonas wittichii
           RW1 RepID=A5VGM9_SPHWW
          Length = 137

 Score = 65.1 bits (157), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 43/110 (39%), Positives = 62/110 (56%), Gaps = 6/110 (5%)

Query: 3   RPTIIINDLDAERIDIL--LEQPAYAGLP-IADALNAELDRAQMCSPEEMPHDVVTMNSR 59
           RP I + D +A   DIL  L   A   LP ++  L  EL RA +   + +P D+VTM+S 
Sbjct: 9   RPPIHMIDSEA---DILADLATSAATRLPQVSQLLLEELGRATIHKADRIPGDIVTMHSV 65

Query: 60  VKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHW 109
           V+F + + G+     LVYP     +  ++S++ PVGA L+GLR G SI W
Sbjct: 66  VQFTDAASGKEHRYQLVYPKDADIAEGRISILTPVGAGLIGLRAGQSILW 115


>UniRef50_A7HXN2 GreA/GreB family elongation factor n=1 Tax=Parvibaculum
           lavamentivorans DS-1 RepID=A7HXN2_PARL1
          Length = 133

 Score = 65.1 bits (157), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 48/129 (37%), Positives = 72/129 (55%), Gaps = 9/129 (6%)

Query: 5   TIIINDL-----DAERIDIL--LEQPAYAGLP-IADALNAELDRAQMCSPEEMPHDVVTM 56
           TI+++DL       E+ D L  + +     LP +A  L+ EL+RA++     +P DVV +
Sbjct: 3   TIVVDDLPQIVVAEEQFDALSDIAEGLTGVLPHVAGFLDRELNRARLLPLAHVPSDVVKV 62

Query: 57  NSRVKFRNLSDGE-VRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGV 115
           NS V+F   + GE V    L +PA+ T  +  +S+ +PVG ALLGLR G SI W    G 
Sbjct: 63  NSTVEFTLDTRGERVERLKLAFPAESTAGDGYVSIASPVGVALLGLREGQSIEWTSRYGE 122

Query: 116 ATHLEVLEL 124
              L+VL++
Sbjct: 123 RRSLKVLKV 131


>UniRef50_A3PS97 GreA/GreB family elongation factor n=4 Tax=Rhodobacter sphaeroides
           RepID=A3PS97_RHOS1
          Length = 137

 Score = 63.9 bits (154), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 65/129 (50%), Gaps = 4/129 (3%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLP-IADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           SRP I +  +  ER+D L    A A LP +A  L  +L  A++ +P  +  DVVT+ S V
Sbjct: 8   SRPAIDMTLI--ERLDTL-AGAAIARLPDVAYPLITKLTSARLLAPARLSSDVVTIGSEV 64

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
            + +      R  TL +P     S   +S++ PVG ALLGL  GD   W+   G    L 
Sbjct: 65  LYHDDQGARDRRVTLSWPEDADISRRSVSILTPVGVALLGLSAGDRFQWQTRAGERRSLT 124

Query: 121 VLELEYQPE 129
           VL++  +P 
Sbjct: 125 VLQVGSEPR 133


>UniRef50_A5V983 GreA/GreB family elongation factor n=1 Tax=Sphingomonas wittichii
           RW1 RepID=A5V983_SPHWW
          Length = 166

 Score = 63.5 bits (153), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 66/129 (51%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKF 62
           RP I + D +AE +  +          +++ L  E+DRA +     +P DVVTM+S V+F
Sbjct: 38  RPAIHMIDSEAETLANMAVAAEERIPQVSELLLEEIDRATLYKAARIPADVVTMHSHVEF 97

Query: 63  RNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVL 122
            + ++G  R   LVYP        ++S++  VGA L+GLR G SI W    G    L + 
Sbjct: 98  VDEANGTSRTVQLVYPKDADIDAGRVSILTLVGAGLIGLREGQSILWPGRDGHRRLLTIT 157

Query: 123 ELEYQPEAA 131
            +  + EAA
Sbjct: 158 RVSREAEAA 166


>UniRef50_B0T7C4 GreA/GreB family elongation factor n=1 Tax=Caulobacter sp. K31
           RepID=B0T7C4_CAUSK
          Length = 139

 Score = 62.8 bits (151), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/125 (32%), Positives = 68/125 (54%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           ++RP II+ + +A+R+  L  +   A    AD L  E++RA++ +  +MP  VV M S V
Sbjct: 8   VARPDIILAETEADRLSALATRLRDAAPQAADLLLEEIERAEIRADLDMPRTVVRMESVV 67

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
           +F + + G  R   LVYP     +  ++SV++ VGA L+GL    +I W    G    L 
Sbjct: 68  QFVDEAHGNPRTVLLVYPRDADIAAGKVSVLSFVGAGLIGLSPHQAIQWPDRNGRQRTLR 127

Query: 121 VLELE 125
           +L++ 
Sbjct: 128 ILKVR 132


>UniRef50_Q930S2 Putative uncharacterized protein n=1 Tax=Sinorhizobium meliloti
           RepID=Q930S2_RHIME
          Length = 140

 Score = 61.2 bits (147), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/111 (36%), Positives = 59/111 (53%), Gaps = 5/111 (4%)

Query: 19  LLEQPAYAGLP----IADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRT 74
           LL + AY  L     IA  L  +L+R  +   +++P DVV + S V    + DG  R  +
Sbjct: 22  LLSRLAYQALSRDFDIAAELIEKLERPCVLPDDQVPPDVVKIGSIVTC-EVEDGPCRTFS 80

Query: 75  LVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
           LVYP  +     ++SV+ PVG ALLGLR G ++ W    G   HL V+ +E
Sbjct: 81  LVYPDDVDAEKGRISVLTPVGVALLGLRPGQAVEWFSRDGQRNHLIVVRVE 131


>UniRef50_C0QME5 GreA2 n=1 Tax=Desulfobacterium autotrophicum HRM2
           RepID=C0QME5_DESAH
          Length = 95

 Score = 61.2 bits (147), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 26/49 (53%), Positives = 35/49 (71%)

Query: 88  LSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQPEAAGDYLL 136
           +S++APVG+ALLGL +GD I W  PGG    + + E+ YQPE +GDY L
Sbjct: 47  ISILAPVGSALLGLSIGDKIEWPKPGGGNLKVRITEIIYQPERSGDYQL 95


>UniRef50_C6VSR5 GreA/GreB family elongation factor n=2 Tax=Sphingobacteriales
           RepID=C6VSR5_DYAFD
          Length = 134

 Score = 60.5 bits (145), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 56/97 (57%), Gaps = 1/97 (1%)

Query: 33  ALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMA 92
           +L  EL+RA +    E+P   + +NS VK R  +  +    ++V P     +  ++S++ 
Sbjct: 35  SLAYELNRAVVVEDNELPAGSIRLNSYVKVRETTTNKEMAFSIVMPKDADIAKQRISILT 94

Query: 93  PVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQPE 129
           P+GAAL+GL  G+++ W++P G+    ++L++ Y  E
Sbjct: 95  PMGAALIGLCKGETVEWKMPAGI-RRFKILDVWYDQE 130


>UniRef50_B8IHN9 GreA/GreB family elongation factor n=1 Tax=Methylobacterium
           nodulans ORS 2060 RepID=B8IHN9_METNO
          Length = 147

 Score = 60.5 bits (145), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 59/108 (54%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
           S P I I++ D +R+ +        G      L +EL+RA +C   E+P  VV+ N RV 
Sbjct: 6   SLPPITISNYDFDRLVVYGLTAYMHGDRNVVFLFSELERATVCPAMELPDQVVSANCRVI 65

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHW 109
           +R   +  +R   LV+P  +   + ++S  +P+G ALLGL+VGD + +
Sbjct: 66  YRIDDEPCLRAHMLVHPCDLISPDDEISAGSPLGIALLGLKVGDRMPF 113


>UniRef50_Q98F06 Nucleoside diphosphate kinase regulator n=2 Tax=Mesorhizobium
           RepID=Q98F06_RHILO
          Length = 140

 Score = 60.5 bits (145), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/114 (34%), Positives = 58/114 (50%), Gaps = 3/114 (2%)

Query: 3   RPT--IIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           RP+  I+I+D D +R+  L           A+ L  E+DRA +     MP DVV M S V
Sbjct: 8   RPSSRILISDTDHDRLTGLARALLDRAPETAEELLFEMDRAVVTDAAAMPADVVRMGSAV 67

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGG 114
             R       R+  LVYP +   +  ++SV+ P+G AL+G  +G ++ W   GG
Sbjct: 68  TVRGEGGATQRI-MLVYPGEADIAENRISVLTPMGTALIGASIGQAVCWSSRGG 120


>UniRef50_B1ZD84 GreA/GreB family elongation factor n=4 Tax=Methylobacterium
           RepID=B1ZD84_METPB
          Length = 149

 Score = 60.1 bits (144), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/110 (35%), Positives = 58/110 (52%), Gaps = 2/110 (1%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYA-GLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
            RP I +   D +R+ +     AY  G P AD L ++L+RA   +    P DVV +  RV
Sbjct: 6   KRPPITLPTYDFDRL-VASGLAAYQRGDPYADLLLSKLERAASFAASPPPRDVVAVTCRV 64

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWE 110
           ++R   +  VR   LVYP  +  S  ++S  + +G A+LGLR GD I + 
Sbjct: 65  RYRLDDEPTVRAHRLVYPGHVIASEEEISAASALGVAMLGLRRGDRIPFR 114


>UniRef50_Q3SU57 GreA/GreB family elongation factor n=9 Tax=Bradyrhizobiaceae
           RepID=Q3SU57_NITWN
          Length = 151

 Score = 59.7 bits (143), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 66/136 (48%), Gaps = 11/136 (8%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQM----------CSPEEMPHDV 53
           P I I+  D +R+  L E         A+ L  E+DRA++             +    ++
Sbjct: 11  PAIAISAHDIDRLRHLAEAAIEKYPATAEFLAREIDRAEIIPADGSLLDDTRDQRWKVNL 70

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           VTM S V F +   G+ R  TLVYP        ++S+++P+GAAL+GL  G SI ++ P 
Sbjct: 71  VTMQSEVTFIDDVSGQKRRVTLVYPEDADVDAGKISILSPIGAALIGLSAGQSIEFQTPS 130

Query: 114 GVATHLEVLEL-EYQP 128
           G    L V+ +  Y P
Sbjct: 131 GGWRSLTVIAVWSYWP 146


>UniRef50_A5FHU8 GreA/GreB family elongation factor n=1 Tax=Flavobacterium
           johnsoniae UW101 RepID=A5FHU8_FLAJ1
          Length = 132

 Score = 59.3 bits (142), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 58/114 (50%), Gaps = 1/114 (0%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFR 63
           PT   +D    R +++L+         A+ L+ ELDRA +    E+   V+ +NS V   
Sbjct: 5   PTFCKSDYQFLR-ELILKSKNSTNTKEANQLSQELDRAVISKESELDSSVIRINSLVTIE 63

Query: 64  NLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVAT 117
           ++   +     +V P+      +++S++AP+  A++G +  D + WELP G+ T
Sbjct: 64  DVKANKQMKIQIVLPSYADVKQSKISILAPLSVAIIGFKENDEVDWELPAGIKT 117


>UniRef50_B4RF21 Transcription elongation factor n=2 Tax=cellular organisms
           RepID=B4RF21_PHEZH
          Length = 214

 Score = 58.9 bits (141), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 46/112 (41%), Positives = 63/112 (56%), Gaps = 6/112 (5%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFR 63
           PT+ + + D +R   LL    + G P A+ L  ELDRA +    E     V + S V++R
Sbjct: 95  PTVRVAEADYDR---LLNLADHDG-PGAELLARELDRAIVVREGEKSRPFVRLGSTVEYR 150

Query: 64  NLSDGEVRVRTLVYP-AKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGG 114
           +    +VR   LV P A   D+N +LSV++PVGAALLGL VGD+  W  P G
Sbjct: 151 DRLTEKVRTVELVPPDAADIDAN-RLSVLSPVGAALLGLSVGDTFSWTAPDG 201


>UniRef50_B1ZU20 GreA/GreB family elongation factor n=1 Tax=Opitutus terrae PB90-1
           RepID=B1ZU20_OPITP
          Length = 143

 Score = 58.2 bits (139), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 2/104 (1%)

Query: 12  DAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVR 71
           D  ++ +L    +  G P    L +EL R  +     +P   + + S V+  +L  GE+ 
Sbjct: 12  DYTKLSLLATATSRPGTP--SQLRSELSRGVVVDATALPPTAIRLGSTVEIEDLESGEIE 69

Query: 72  VRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGV 115
             TLV P +      +LSV+AP+G A++G   G  + W  PGG 
Sbjct: 70  TYTLVLPEQANVDARKLSVLAPIGTAVIGCLQGAEVAWSTPGGT 113


>UniRef50_A6EMP4 Transcription elongation factor n=4 Tax=Bacteroidetes
           RepID=A6EMP4_9BACT
          Length = 139

 Score = 57.0 bits (136), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 1/81 (1%)

Query: 34  LNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAP 93
           LN EL  A +   EEMP DV+  NS+V   +  +G  +   +V PA       ++S++  
Sbjct: 38  LNEELKTAIIVDEEEMPTDVIRFNSQV-LISTKNGWKKEFQIVSPALKDVKADKISILTV 96

Query: 94  VGAALLGLRVGDSIHWELPGG 114
           +GAAL G   GD++ WE P G
Sbjct: 97  MGAALFGYAQGDTVEWEFPTG 117


>UniRef50_A0LZA7 Transcription elongation factor n=1 Tax=Gramella forsetii KT0803
           RepID=A0LZA7_GRAFK
          Length = 146

 Score = 55.5 bits (132), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 51/93 (54%), Gaps = 2/93 (2%)

Query: 33  ALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMA 92
            LN EL  A++ +  EMP DV+ +NS V        E R   +V P K      ++SV+A
Sbjct: 37  KLNEELKDARILTNSEMPLDVIRLNSLVTIETPYAVE-RTYQIVTPEKGDIRKNKISVLA 95

Query: 93  PVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
           P+G AL G   GD+I W  P G  +++++ E++
Sbjct: 96  PMGLALFGYAQGDNITWTFPLG-ESYIKIKEVK 127


>UniRef50_A4CMB9 Nucleoside diphosphate kinase regulator n=1 Tax=Robiginitalea
           biformata HTCC2501 RepID=A4CMB9_9FLAO
          Length = 139

 Score = 54.3 bits (129), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 2/95 (2%)

Query: 34  LNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAP 93
           L  ELD A++    EM +DVV  +S +   +  +G  R   LV P +   S  ++S++ P
Sbjct: 38  LLTELDSAKIVDEAEMQNDVVRFHSIITVTS-ENGWSRRVQLVLPPERDVSKDKISILTP 96

Query: 94  VGAALLGLRVGDSIHWELPGGVATHLEVLELEYQP 128
           +G AL G   GD++ WE P G    L + ++E +P
Sbjct: 97  MGIALFGYAEGDTVSWEFPSG-PKRLRIEKVEQEP 130


>UniRef50_B4RBL2 Transcription elongation factor n=1 Tax=Phenylobacterium zucineum
           HLK1 RepID=B4RBL2_PHEZH
          Length = 143

 Score = 53.5 bits (127), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 61/126 (48%), Gaps = 6/126 (4%)

Query: 2   SRPTIIINDLD-AERIDILLEQP-AYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSR 59
           S P + + D + A   DI+   P A  GL +   L  EL RA +      P DVV + S 
Sbjct: 9   SNPRVTVLDEEYAPLADIVCGSPRATPGLAL---LWNELSRATLVQAGRAPADVVRLGSA 65

Query: 60  VKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHL 119
           V++ +L+  E R   LV P +      +  V   +GAALLGLR GD  HW  P G    L
Sbjct: 66  VEYTDLTRRESRRIRLVLPREARPPALE-PVSGTIGAALLGLRPGDVFHWRAPSGELRSL 124

Query: 120 EVLELE 125
           +V  +E
Sbjct: 125 QVDAVE 130


>UniRef50_Q13CU9 Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris
           BisB5 RepID=Q13CU9_RHOPS
          Length = 156

 Score = 52.8 bits (125), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 61/127 (48%), Gaps = 2/127 (1%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFR 63
           P + I   D  R+  +  Q   +  P+   L +EL+RA +      P   V ++  V FR
Sbjct: 3   PPVSIASRDFGRLRQIAVQALASRDPVGRFLFSELERAVVID-SPAPPLTVRLDDWVTFR 61

Query: 64  NLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLE 123
              D  +  R LV P     +   LSV++PVGAAL+GLR G  +H++   GV  H+  +E
Sbjct: 62  ADDDQPLESRILVLPGHYRRNALHLSVLSPVGAALVGLRPGARMHYQGVDGV-QHVATVE 120

Query: 124 LEYQPEA 130
               PE 
Sbjct: 121 SLEPPEG 127


>UniRef50_A7HXN3 GreA/GreB family elongation factor n=1 Tax=Parvibaculum
           lavamentivorans DS-1 RepID=A7HXN3_PARL1
          Length = 171

 Score = 52.0 bits (123), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 53/102 (51%), Gaps = 1/102 (0%)

Query: 29  PIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQL 88
           P+   + A+L+ A++ S  E+   V T+ S V++R + D  +  R L    +   +   L
Sbjct: 48  PMQPFVRAKLEEARIVSGNEIAETVATLGSIVRYR-IEDRMLERRLLQLDNRHAPNGQYL 106

Query: 89  SVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQPEA 130
           SV+ P+G ALLG   GD    EL  G    + +  +E+QPEA
Sbjct: 107 SVLTPIGLALLGRSTGDLCEAELFNGAKLTIRIALIEHQPEA 148


>UniRef50_C6XVH8 Transcription elongation factor n=1 Tax=Pedobacter heparinus DSM
           2366 RepID=C6XVH8_PEDHD
          Length = 125

 Score = 52.0 bits (123), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 52/87 (59%)

Query: 32  DALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVM 91
           + L  EL  A+    +++P DVVT+N+RV+ + L  G     TLV PAK  + +  LS++
Sbjct: 30  EKLEQELRNARQILSKDIPADVVTVNTRVRVKELETGAEFNYTLVPPAKARNKHNTLSIL 89

Query: 92  APVGAALLGLRVGDSIHWELPGGVATH 118
           +P+G A++G   G  + WE+P G+  +
Sbjct: 90  SPIGVAMVGYSQGSELKWEMPEGIKAY 116


>UniRef50_A5FHJ3 GreA/GreB family elongation factor n=3 Tax=Flavobacteriaceae
           RepID=A5FHJ3_FLAJ1
          Length = 143

 Score = 51.2 bits (121), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 48/79 (60%), Gaps = 1/79 (1%)

Query: 47  EEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDS 106
           + +P DVV++N +V +++ +  + +   LV P K+  S  ++SV++  G A++G +VGD 
Sbjct: 63  KNLPEDVVSVNRKVTYKDHNTNQEKTILLVGPEKVKVSKNKISVLSDEGIAMVGYKVGDL 122

Query: 107 IHWELPGGVATHLEVLELE 125
           I W    G    LE+L++E
Sbjct: 123 IEWPAKKG-HLKLEILKVE 140


>UniRef50_Q98F07 Nucleoside diphosphate kinase regulator; Rnk n=2 Tax=Mesorhizobium
           RepID=Q98F07_RHILO
          Length = 180

 Score = 50.4 bits (119), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 60/132 (45%), Gaps = 1/132 (0%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           M      +   D   ++++LE+      PI   L  +L  A +   + +  D+VT+NSRV
Sbjct: 1   MKSTNCCLTTKDRAVLEVMLERRRAFADPIVHVLEHKLSSADVVPIDTVGPDIVTLNSRV 60

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
            F ++  G  + RTLV         + LSV    G  +LG+  G +   E   G    + 
Sbjct: 61  VF-SIDAGHAQTRTLVQNEVRGPVGSSLSVATRRGLCMLGMAQGQTASIEHADGRRESIL 119

Query: 121 VLELEYQPEAAG 132
           +  + YQPEAAG
Sbjct: 120 IKAVLYQPEAAG 131


>UniRef50_B4W8F1 Putative uncharacterized protein n=1 Tax=Brevundimonas sp. BAL3
           RepID=B4W8F1_9CAUL
          Length = 141

 Score = 50.1 bits (118), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 64/132 (48%), Gaps = 5/132 (3%)

Query: 2   SRPTIIINDLDAERIDILL-EQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           SRP I ++  D + +  L+ + PA     +A  L  EL+RA +C P + P     ++  +
Sbjct: 12  SRPDIFLSARDHQTLSRLVGDMPAEG---VAGLLQEELERAVICEPGDRPRGAAPLHRWL 68

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
            + +    + R   +V P +      ++SV++ VGA L+GL  G +I W  P G    L 
Sbjct: 69  HYVDGRSPQPRRIQIVLPNEADIDAGKVSVLSYVGAGLIGLVEGHTIAWTDPSGADRRLT 128

Query: 121 VLELEYQPEAAG 132
            + +E  PE  G
Sbjct: 129 PVMIE-DPETPG 139


>UniRef50_B9KZF4 Transcription elongation factor greA n=2 Tax=Thermomicrobia (class)
           RepID=B9KZF4_THERP
          Length = 156

 Score = 49.7 bits (117), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/77 (38%), Positives = 43/77 (55%), Gaps = 2/77 (2%)

Query: 38  LDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAA 97
           L RAQM +    P D V + SRV   +  +G V    +V P +   +  ++S+ +PVGAA
Sbjct: 72  LRRAQMIT-RAGPQDEVRLGSRVTVID-EEGSVETWVIVSPEEANAAQGRISIESPVGAA 129

Query: 98  LLGLRVGDSIHWELPGG 114
           LLG RVG ++    PGG
Sbjct: 130 LLGKRVGTTVTVRAPGG 146


>UniRef50_A6LPL4 Transcription elongation factor greA n=30 Tax=Clostridia
           RepID=GREA_CLOB8
          Length = 160

 Score = 48.5 bits (114), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 1/85 (1%)

Query: 38  LDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAA 97
           L  A +    E+P D+V++ S+VK ++    E    ++V  A+    N ++S  +PVG A
Sbjct: 72  LKNAVVVDESEIPSDIVSVGSKVKVKDYEFDEEVEYSIVGSAEADPMNFKISNESPVGNA 131

Query: 98  LLGLRVGDSIHWELPGGVATHLEVL 122
           L+G +VGD +   +P GV    E+L
Sbjct: 132 LVGKKVGDVVEVTVPDGV-NKFEIL 155


>UniRef50_A5FRA2 Transcription elongation factor n=3 Tax=Dehalococcoides
           RepID=A5FRA2_DEHSB
          Length = 266

 Score = 48.1 bits (113), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 43/83 (51%)

Query: 37  ELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGA 96
           EL  A++    +     V M + VK R+L +GE  + TLV P ++     ++S  +P+G 
Sbjct: 177 ELKHAEVSEYTDNNTSKVNMGNTVKLRDLKNGEQCIYTLVSPKEIEPLKGRISASSPIGK 236

Query: 97  ALLGLRVGDSIHWELPGGVATHL 119
           AL     GD+I  E+P G   ++
Sbjct: 237 ALFNRSKGDNIEIEVPSGTLQYV 259


>UniRef50_UPI00016C498C transcription elongation factor greA n=1 Tax=Gemmata obscuriglobus
           UQM 2246 RepID=UPI00016C498C
          Length = 161

 Score = 48.1 bits (113), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 46/93 (49%), Gaps = 1/93 (1%)

Query: 32  DALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVM 91
           DAL+  L RA +     +P D V   S+V+  ++   E     LV P +      ++   
Sbjct: 65  DALSDRLSRAVIVDTSNLPKDTVAFGSKVRVLDVDVDEEETFELVSPGQENPDKGRILTG 124

Query: 92  APVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
           +P+G  L+G + GD++  ++P G     ++LE+
Sbjct: 125 SPIGQGLIGRKKGDTVEIQVPSGT-IKFKILEI 156


>UniRef50_Q3ATA7 Transcription elongation factor greA n=13 Tax=Bacteria
           RepID=GREA_CHLCH
          Length = 160

 Score = 47.4 bits (111), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 2/96 (2%)

Query: 34  LNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSD-GEVRVRTLVYPAKMTDSNTQLSVMA 92
           L ++L  A +  P+++  D V + + VK RNL +  E+   TLV   +      ++SV +
Sbjct: 66  LESKLSAATILDPKQIKTDKVYILTSVKLRNLDNPDEIIEYTLVSSEEADTDAGKISVRS 125

Query: 93  PVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQP 128
           PVG +L+G  VG  +   +P G   H E+LE+  +P
Sbjct: 126 PVGRSLIGKTVGAKVTIVVPKG-ELHYEILEIFVKP 160


>UniRef50_Q0B0N4 Transcription elongation factor greA n=6 Tax=Clostridia
           RepID=GREA_SYNWW
          Length = 159

 Score = 47.0 bits (110), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 49/98 (50%), Gaps = 2/98 (2%)

Query: 21  EQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAK 80
           EQ    G  I+  L   L +A++   E++  DVV++ SR+  + +  G     TLV   +
Sbjct: 57  EQAFIEGRIIS--LEKTLKKARLMEDEDIRTDVVSLGSRITLKEMKSGREVTVTLVSSVE 114

Query: 81  MTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATH 118
               + ++S  +PVG A++G +V  ++  E P G   +
Sbjct: 115 SKLKDGKISDESPVGKAIMGKKVKSTVSVEAPAGTIKY 152


>UniRef50_C6WVB7 GreA/GreB family elongation factor n=2 Tax=Methylophilaceae
           RepID=C6WVB7_METML
          Length = 168

 Score = 46.6 bits (109), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/94 (27%), Positives = 51/94 (54%), Gaps = 2/94 (2%)

Query: 34  LNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAP 93
           + A LD A +  P +  H+ V   + ++  + + G      +V   +   S  ++S ++P
Sbjct: 76  VRARLDSAILVDPTKQSHETVLFGATIEVEDGA-GAQHTFHIVGEDEADASINKVSWVSP 134

Query: 94  VGAALLGLRVGDSIHWELPGGVATHLEVLELEYQ 127
           +  +LLG +VGD++ W+ P G   +LE+L++ YQ
Sbjct: 135 LAKSLLGQKVGDTVTWQRPAG-NINLEILDIHYQ 167


>UniRef50_C0QWD9 Transcription elongation factor n=2 Tax=Brachyspira
           RepID=C0QWD9_BRAHW
          Length = 154

 Score = 46.2 bits (108), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 1/91 (1%)

Query: 34  LNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAP 93
           L ++L   ++  P  +  D VT   RVK ++ S   V    +V   +   S  +++++ P
Sbjct: 63  LESDLAGCEIIDPANLDKDTVTFGKRVKVKDKSRNAVFEYRIVGELEADMSKNEITIVTP 122

Query: 94  VGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
           +   LLG ++GD +  ++P G    LE+LE+
Sbjct: 123 IAKGLLGKKIGDVVTIKVPAGDKV-LEILEI 152


>UniRef50_D0J9T5 Transcription elongation factor n=55 Tax=Bacteria
           RepID=D0J9T5_BLASP
          Length = 162

 Score = 46.2 bits (108), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/110 (26%), Positives = 56/110 (50%), Gaps = 1/110 (0%)

Query: 17  DILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLV 76
           D + E   +  + IA  L  +L  A++    ++    V++ S V+ +NL+ G  ++ TLV
Sbjct: 52  DAIKEAQEFLEMNIA-KLKKKLSNARIIDGSQINRTRVSILSTVRVKNLTYGGEQIYTLV 110

Query: 77  YPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
              +    + ++S+  P+   LLG +VG   H +LP  +    E+LE+ +
Sbjct: 111 PEGEADLKSGKISINTPISTGLLGKQVGQIAHIKLPNKMILDYEILEIAF 160


>UniRef50_A5D4X0 Putative uncharacterized protein n=1 Tax=Pelotomaculum
           thermopropionicum SI RepID=A5D4X0_PELTS
          Length = 150

 Score = 45.8 bits (107), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 37/65 (56%)

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           VT+ S V+ +NLS+ EV    +V P         +S ++PVG +LL  +VGD +  + PG
Sbjct: 74  VTIGSEVEIQNLSEQEVYKYFIVNPFYSEVREGHISFLSPVGKSLLLKKVGDEVEVKAPG 133

Query: 114 GVATH 118
           GV  +
Sbjct: 134 GVFRY 138


>UniRef50_Q97EB6 Transcription elongation factor greA n=6 Tax=Clostridiales
           RepID=GREA_CLOAB
          Length = 158

 Score = 45.8 bits (107), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 44/81 (54%)

Query: 38  LDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAA 97
           L  A +    E+ +DVV++ S+V  ++    E    ++V  A+      ++S  +PVG+A
Sbjct: 72  LKNANVIDESELKNDVVSVGSKVMVKDYQFDEEIEFSIVGSAEADPIENKISNESPVGSA 131

Query: 98  LLGLRVGDSIHWELPGGVATH 118
           L+G +VGD I   +P GV  +
Sbjct: 132 LIGKKVGDEIEVNVPDGVDKY 152


>UniRef50_Q4HT85 Transcription elongation factor n=1 Tax=Campylobacter upsaliensis
           RM3195 RepID=Q4HT85_CAMUP
          Length = 161

 Score = 45.1 bits (105), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 1/91 (1%)

Query: 38  LDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAA 97
           L RAQ+  P    H+ V   S V   +L   +    TLV   +       +S+ +P+  A
Sbjct: 69  LSRAQVIDPASYEHESVKFGSSVLIMDLESEKESKYTLVGTCESDLEKGYISIASPLARA 128

Query: 98  LLGLRVGDSIHWELPGGVATHLEVLELEYQP 128
           +LG + GD     LP G  +  E+L + Y+P
Sbjct: 129 MLGKKEGDEFKVRLPKG-ESEFEILSVTYEP 158


>UniRef50_P64276 Transcription elongation factor greA n=48 Tax=delta/epsilon
           subdivisions RepID=GREA_HELPJ
          Length = 164

 Score = 45.1 bits (105), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 46/87 (52%), Gaps = 1/87 (1%)

Query: 41  AQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLG 100
           AQ+  P  + H+ V+  S +K  NL + +    T+V   +   +   +S  +P+  +L+G
Sbjct: 72  AQVIDPSALAHNKVSFGSTIKILNLDNDKEFSYTIVGSVESDPAKGLISFGSPIAKSLIG 131

Query: 101 LRVGDSIHWELPGGVATHLEVLELEYQ 127
              GD++  +LP G  +  E+L++ Y+
Sbjct: 132 KSKGDAVSIQLPNG-ESDFEILDIYYK 157


>UniRef50_C1ZBG3 Transcription elongation factor n=1 Tax=Planctomyces limnophilus
           DSM 3776 RepID=C1ZBG3_PLALI
          Length = 160

 Score = 45.1 bits (105), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 5/97 (5%)

Query: 32  DALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAK---MTDSNTQL 88
           ++L ++L    +     +P  VV   +RV  +N  DG++     V P +   M+D    L
Sbjct: 63  NSLKSKLASCYIVDKSTLPKGVVAFGTRVTVKNTDDGDIEKYEFVGPGEEDYMSDVMKIL 122

Query: 89  SVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
           +  +P+ +ALLG +V D +  ++P G   + E+ E+E
Sbjct: 123 TT-SPLASALLGKKVNDKVSIQVPRGTINY-EITEIE 157


>UniRef50_C0QKN0 Transcription elongation factor n=1 Tax=Desulfobacterium
           autotrophicum HRM2 RepID=C0QKN0_DESAH
          Length = 175

 Score = 44.7 bits (104), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 2/82 (2%)

Query: 34  LNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTD-SNTQLSVMA 92
           L  ++  A++  P  +  D V   SRV   NL  GE  V  ++   + +D    ++SV +
Sbjct: 85  LGYKIASAKIIDPATVSKDCVRFASRVVIENLDSGE-EVEYMIVGQEESDIHKGKISVSS 143

Query: 93  PVGAALLGLRVGDSIHWELPGG 114
           P+G ALLG + GD I  + PGG
Sbjct: 144 PLGMALLGKQPGDEIVIQAPGG 165


>UniRef50_Q3Z8E7 Transcription elongation factor greA n=2 Tax=Dehalococcoides
           RepID=GREA_DEHE1
          Length = 156

 Score = 44.3 bits (103), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/66 (31%), Positives = 34/66 (51%)

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           V M S VK R+  +GE    TLV P ++     ++S  +P+G A+     G+ I  E+P 
Sbjct: 85  VNMGSTVKLRDPKNGECCTYTLVSPKEIEPLKGKISASSPIGKAVFNRNKGEQIEIEVPS 144

Query: 114 GVATHL 119
           G   ++
Sbjct: 145 GTLQYI 150


>UniRef50_D2R891 Transcription elongation factor GreA n=1 Tax=Pirellula staleyi DSM
           6068 RepID=D2R891_9PLAN
          Length = 164

 Score = 44.3 bits (103), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 1/90 (1%)

Query: 37  ELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGA 96
           +L +A +  P  MP D V+  + V  +++   E    TLV   +   +  ++ + +P+G 
Sbjct: 69  KLSKASIIDPSTMPRDQVSFGTTVLVKDIDMDEEEEFTLVGAGEEDYNAGRILITSPLGQ 128

Query: 97  ALLGLRVGDSIHWELPGGVATHLEVLELEY 126
           AL+G ++GD +    P G +  LE+L L++
Sbjct: 129 ALVGKKIGDVVDVPAPKG-SYQLEILTLKF 157


>UniRef50_Q04EK0 Transcription elongation factor greA n=4 Tax=Bacilli
           RepID=GREA_OENOB
          Length = 162

 Score = 43.9 bits (102), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 23/84 (27%), Positives = 44/84 (52%)

Query: 41  AQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLG 100
           AQ+        +VVT+  ++ F+ + DG+    T+V  A+    + ++S  +P+G ALL 
Sbjct: 75  AQVIDASSASKNVVTLGKKISFKEVPDGDEETYTIVGSAESDPLSGKISNDSPMGKALLD 134

Query: 101 LRVGDSIHWELPGGVATHLEVLEL 124
            + GD +   LP   +  +E+L +
Sbjct: 135 HKTGDKVEIPLPENHSVTVEILHV 158


>UniRef50_Q11G80 GreA/GreB family elongation factor n=1 Tax=Chelativorans sp. BNC1
           RepID=Q11G80_MESSB
          Length = 176

 Score = 43.9 bits (102), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 1/98 (1%)

Query: 34  LNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAP 93
           L  +L+ A++  PE  P DVVT+NSR+ FR + +G    R +            L +   
Sbjct: 35  LRHKLETARVTRPEVTPDDVVTLNSRISFR-VGNGMPETRIICRDRSRGPLGYFLPITTI 93

Query: 94  VGAALLGLRVGDSIHWELPGGVATHLEVLELEYQPEAA 131
            G ALLGL  G          +   L+V  + YQPE A
Sbjct: 94  RGLALLGLTEGQMTPVSRGRSLVEILQVTAIHYQPERA 131


>UniRef50_C4L6P4 GreA/GreB family elongation factor n=1 Tax=Exiguobacterium sp. AT1b
           RepID=C4L6P4_EXISA
          Length = 152

 Score = 43.5 bits (101), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 3/92 (3%)

Query: 34  LNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAP 93
           LN  LD A +   E +  +VVT  +RV  R +   E     +V  A+       +SV +P
Sbjct: 63  LNHLLDDATIV--ESVQSEVVTFGNRVVIREVQQEETERYRIVSEAEADLERGSISVTSP 120

Query: 94  VGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
           +G  L+G  +G +I  E PGG    +EVL +E
Sbjct: 121 LGRRLMGATMGQTIQVETPGG-TIQVEVLHIE 151


>UniRef50_Q30T56 Transcription elongation factor n=3 Tax=Campylobacterales
           RepID=Q30T56_SULDN
          Length = 174

 Score = 43.5 bits (101), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 1/94 (1%)

Query: 34  LNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAP 93
           LNA + +A +  P  + H  V+  S V+  +L   +  V T+    +    N  +S+ +P
Sbjct: 64  LNAMIQKAHIIDPSTLLHTKVSFGSSVRILDLESDKEEVYTICGVLESEPENGLISIHSP 123

Query: 94  VGAALLGLRVGDSIHWELPGGVATHLEVLELEYQ 127
           +   +LG RV D    +LP  +    E+LE+ Y+
Sbjct: 124 LAQVMLGKRVSDEFKIQLP-LMKKEYEILEIYYK 156


>UniRef50_A0M1N1 GreA-like transcription elongation factor n=3 Tax=Flavobacteriaceae
           RepID=A0M1N1_GRAFK
          Length = 166

 Score = 43.5 bits (101), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/93 (25%), Positives = 49/93 (52%), Gaps = 1/93 (1%)

Query: 34  LNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAP 93
           L+  L  A++   ++ P D +   +RVK  N + G+++   +V   +      +++ +AP
Sbjct: 75  LSERLQTARLLDSKDQPKDEIRFGARVKLTNETSGQLQEFQIVGVDEADIKKKKIAFVAP 134

Query: 94  VGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
           +  A+ G +VG+ I ++L G     L+VL + Y
Sbjct: 135 IAKAVTGRKVGEEIDFKL-GNEIRKLKVLGITY 166


>UniRef50_B9XEY1 GreA/GreB family elongation factor n=1 Tax=bacterium Ellin514
           RepID=B9XEY1_9BACT
          Length = 170

 Score = 43.1 bits (100), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 2/94 (2%)

Query: 34  LNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAP 93
           L   L  A++  P   P + V   + V  R+ S  E R R +       D +  +S ++P
Sbjct: 79  LEQSLATAEIVPPPPQPWEQVRFGATVTVRDESGNETRYRIVGVDETDIDRD-WVSWLSP 137

Query: 94  VGAALLGLRVGDSIHWELPGGVATHLEVLELEYQ 127
           +  AL+  R+G+ +H+  P G    LE++ + Y+
Sbjct: 138 IARALINARIGERVHFRFPAG-EKQLEIVSITYE 170


>UniRef50_Q2LR03 Transcription elongation factor greA n=1 Tax=Syntrophus
           aciditrophicus SB RepID=GREA_SYNAS
          Length = 161

 Score = 43.1 bits (100), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 1/77 (1%)

Query: 52  DVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWEL 111
           D +   + V     S G+     LV P +   S  ++SV +P+G AL+G  +GD +    
Sbjct: 83  DRIVFGATVIIEEASTGKQTNYQLVGPFESNISENKISVTSPIGKALIGKSIGDEVKVHT 142

Query: 112 PGGVATHLEVLELEYQP 128
           PGG+  + EV+++   P
Sbjct: 143 PGGI-RNFEVVDIYINP 158


>UniRef50_Q1H282 GreA/GreB family elongation factor n=2 Tax=Proteobacteria
           RepID=Q1H282_METFK
          Length = 165

 Score = 42.7 bits (99), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 46/93 (49%), Gaps = 2/93 (2%)

Query: 34  LNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAP 93
           L A L+ A +  P   P D V   + V+  +  +G      +V   +   +  ++S ++P
Sbjct: 75  LQARLESAIVVDPATQPTDTVLFGATVEVED-ENGNSHTFMIVGEDEADIATNRVSWVSP 133

Query: 94  VGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
           +  AL+G ++GDS+ W  P G    LE++ + Y
Sbjct: 134 LAKALIGQKIGDSVTWHRPAG-NLELEIIAIHY 165


>UniRef50_C4XLU8 Transcription elongation factor greA n=11 Tax=Desulfovibrionales
           RepID=GREA_DESMR
          Length = 164

 Score = 42.7 bits (99), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 52/101 (51%), Gaps = 2/101 (1%)

Query: 34  LNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAP 93
           + + + R  +     +  + V   + V+  ++  G+V+  TL+ P +   S   +S+++P
Sbjct: 64  IESRMSRFNVIDLATLGGEQVIFGATVEIEDVDTGDVKKYTLLGPDEAEPSKGSISLLSP 123

Query: 94  VGAALLGLRVGDSIHWELPGGVATHLEVLELEYQ-PEAAGD 133
           VG ALLG  VGD I  + P G   + E++ + +  P AA D
Sbjct: 124 VGLALLGKFVGDEIVVDAPRG-KINYEIVSIAFHGPIAAAD 163


>UniRef50_Q1AU03 Transcription elongation factor n=1 Tax=Rubrobacter xylanophilus
           DSM 9941 RepID=Q1AU03_RUBXD
          Length = 154

 Score = 42.4 bits (98), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 2/93 (2%)

Query: 34  LNAELDRAQMCSPEEMPHD-VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMA 92
           L   L  A++  P     +  V + +RV  R + DG  R   +V   +   ++ +LS  +
Sbjct: 60  LQRRLRNAKIVDPASSAEEGAVDLGTRVTLRVVGDGRERTFQIVGANEADPASGKLSHAS 119

Query: 93  PVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
           PVG ALL  RVG+ +    P G AT  E++ +E
Sbjct: 120 PVGKALLRRRVGEKVRVSTPRG-ATEYEIVSVE 151


>UniRef50_C9RKD0 Transcription elongation factor n=1 Tax=Fibrobacter succinogenes
           subsp. succinogenes S85 RepID=C9RKD0_FIBSS
          Length = 151

 Score = 42.4 bits (98), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 2/92 (2%)

Query: 34  LNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAP 93
           L  +L RAQ+ + +    D +   + +  +NL      V  LV P +    N ++S  +P
Sbjct: 62  LQDQLARAQVIAFD-ANSDTIKFGATITAKNLKTKREIVYQLVSPEEADALNGKISFKSP 120

Query: 94  VGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
           +GAAL+G + GD++    P G     E+++ +
Sbjct: 121 IGAALMGKKRGDTVEVVTPKG-KNQFEIIDFK 151


>UniRef50_B1MX52 Transcription elongation factor greA n=11 Tax=Firmicutes
           RepID=GREA_LEUCK
          Length = 160

 Score = 42.4 bits (98), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 25/92 (27%), Positives = 45/92 (48%)

Query: 34  LNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAP 93
           L   ++ A++  P     DVV++   V F+ L D E     +V   +      ++S  + 
Sbjct: 68  LKKMIENAEIIDPNATAADVVSLGKTVTFKELPDEEPETYAIVGSTESDPLAGKISNESA 127

Query: 94  VGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
           +  ALL  +VGD +   LP G +  +E+L++E
Sbjct: 128 MAVALLDKKVGDKVSVPLPSGESIDVEILKVE 159


>UniRef50_C8S319 GreA/GreB family elongation factor n=1 Tax=Rhodobacter sp. SW2
           RepID=C8S319_9RHOB
          Length = 167

 Score = 42.0 bits (97), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 5/113 (4%)

Query: 14  ERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVR 73
           ER+D L E  A   +     L A L  A    P   P   V   +RV+   L+DG  +V 
Sbjct: 55  ERLDKLPEAAAERDI---RYLEARLRSAIPVDPSSQPAGEVAFGARVEV-ALADGSRQVW 110

Query: 74  TLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
            +    +   +  +++  +P+  ALLG  VGD + W  P G    LEVL + Y
Sbjct: 111 QITGEDEADATQNRIAPQSPLARALLGAEVGDLVIWRKPSG-PVELEVLAIAY 162


>UniRef50_B0P8A6 Transcription elongation factor n=1 Tax=Anaerotruncus colihominis
           DSM 17241 RepID=B0P8A6_9FIRM
          Length = 151

 Score = 42.0 bits (97), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 47/91 (51%), Gaps = 1/91 (1%)

Query: 34  LNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAP 93
           L  +L   ++   +++  DVV++ SRVK  ++   E  V T+    +  +    +S  +P
Sbjct: 60  LEDQLKHVKIIERDQISTDVVSVGSRVKILDMDYDEEMVYTIASSVESHNDLESISDESP 119

Query: 94  VGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
           VG  L+G +VGD +    P  V   L++LE+
Sbjct: 120 VGKGLIGHKVGDVVEIHAPAAVLK-LKILEI 149


>UniRef50_B4RBL3 Transcription elongation factor GreA/GreB family n=1
           Tax=Phenylobacterium zucineum HLK1 RepID=B4RBL3_PHEZH
          Length = 131

 Score = 42.0 bits (97), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 26/93 (27%), Positives = 49/93 (52%), Gaps = 3/93 (3%)

Query: 34  LNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAP 93
           L  E++R  + + +++    V +NS V +++L     R+  +V P        ++S+++P
Sbjct: 40  LRREVERMAIRAYDDLR--FVRLNSTVTYKDLRTRRRRIVQVVQPEHAHQDENRVSILSP 97

Query: 94  VGAALLGLRVGDSIHW-ELPGGVATHLEVLELE 125
           +GAAL+GL  G    W E   G    ++VL +E
Sbjct: 98  IGAALIGLPEGSVFRWAERIDGATRAVKVLAVE 130


>UniRef50_Q8ZJH2 Transcription elongation factor greB n=165 Tax=Proteobacteria
           RepID=GREB_YERPE
          Length = 171

 Score = 42.0 bits (97), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 2/95 (2%)

Query: 34  LNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAP 93
           L   L+  ++  P+      V   + V+  N  + E R+  LV P +   +   +S+ +P
Sbjct: 66  LAKRLEVLKIVDPDPRQEGKVFFGAWVRVENEQE-EQRIFRLVGPDEFDPAKKWISIDSP 124

Query: 94  VGAALLGLRVGDSIHWELPGGVATHLEVLELEYQP 128
           V  AL+G +V D +  + P G AT+  +LE+ Y+P
Sbjct: 125 VARALIGKQVDDEVTVQTPNGEATYW-ILEIRYRP 158


>UniRef50_D1CSU3 Transcription elongation factor (Fragment) n=1 Tax=Sinorhizobium
           fredii RepID=D1CSU3_RHIFR
          Length = 109

 Score = 41.6 bits (96), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 51/91 (56%), Gaps = 3/91 (3%)

Query: 38  LDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEV-RVRTLVYPAKMTDSNTQLSVMAPVGA 96
           L RA++CSP ++P DVVT+NSRV F    DG V R   LV        N  +SV + +G 
Sbjct: 1   LVRAEICSPRKVPDDVVTINSRVTF--CVDGGVPRTANLVRNESQDFPNYTVSVESLLGL 58

Query: 97  ALLGLRVGDSIHWELPGGVATHLEVLELEYQ 127
            LLGLR G +I  E   G    + V+ +++Q
Sbjct: 59  GLLGLRAGRAIAVETEAGGLQKVNVIRIDFQ 89


>UniRef50_D0WJ76 Transcription elongation factor n=1 Tax=Slackia exigua ATCC 700122
           RepID=D0WJ76_9ACTN
          Length = 161

 Score = 41.6 bits (96), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 36/59 (61%)

Query: 68  GEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
           G  RV T+V  A+   S+ ++S  +PVGAALLG + GD    E P G    ++++++E+
Sbjct: 103 GRERVFTIVGAAEADVSSGKISNESPVGAALLGGKKGDHFTAEGPTGRVIEMDIVKIEH 161


>UniRef50_D1PEW3 Transcription elongation factor n=1 Tax=Prevotella copri DSM 18205
           RepID=D1PEW3_9BACT
          Length = 154

 Score = 41.6 bits (96), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 20/78 (25%), Positives = 43/78 (55%)

Query: 38  LDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAA 97
           L+ A++     +  D V + S++K  NL++      T+V P +    + ++S+ +P+  A
Sbjct: 67  LENARVIDKSRLKSDTVGLLSKIKITNLANKCSMNYTIVNPHEADLHSGKISIKSPIAKA 126

Query: 98  LLGLRVGDSIHWELPGGV 115
           LLG + G+ +  ++P G+
Sbjct: 127 LLGKKAGEEVMVKVPAGL 144


>UniRef50_Q725M4 Transcription elongation factor greA n=4 Tax=Desulfovibrionaceae
           RepID=GREA_DESVH
          Length = 163

 Score = 41.2 bits (95), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 1/75 (1%)

Query: 52  DVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWEL 111
           D V   + VK  +L  GE +  TL+ P +   +   +SV +PV  A+LG   GD I  + 
Sbjct: 82  DKVMFGATVKIEDLESGEEKEYTLLGPDEADYAKGSISVQSPVARAMLGKEEGDEIVVDA 141

Query: 112 PGGVATHLEVLELEY 126
           P G   H E++ + +
Sbjct: 142 PRG-KIHYEIVSIRF 155


>UniRef50_A6X2G5 GreA/GreB family elongation factor n=2 Tax=Ochrobactrum
           RepID=A6X2G5_OCHA4
          Length = 156

 Score = 41.2 bits (95), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 5/65 (7%)

Query: 52  DVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGD-----S 106
           DVV     V+  NL DG+VR  T+V   +   SN ++S +APV   L G  VGD     +
Sbjct: 86  DVVRFGMTVELENLDDGKVRRWTIVGEDEADPSNGKISHVAPVAILLFGKPVGDVVKINN 145

Query: 107 IHWEL 111
           + WE+
Sbjct: 146 VEWEI 150


>UniRef50_Q01RT9 GreA/GreB family elongation factor n=2 Tax=Acidobacteria
           RepID=Q01RT9_SOLUE
          Length = 164

 Score = 41.2 bits (95), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 1/91 (1%)

Query: 34  LNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAP 93
           L + L +  M    ++P D   + S V   ++   +     LV   +    N ++S  +P
Sbjct: 59  LKSRLGQLAMIDFTKIPRDKAGLGSTVVVLDVKSDQEITYHLVTSEEADAPNGKVSTTSP 118

Query: 94  VGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
           +G ALLG  VGD +    PGGV   LE+L+L
Sbjct: 119 IGRALLGKTVGDEVKVMSPGGVK-ELEILKL 148


>UniRef50_A7HDS3 Transcription elongation factor GreB n=3 Tax=Myxococcales
           RepID=A7HDS3_ANADF
          Length = 169

 Score = 40.8 bits (94), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 2/95 (2%)

Query: 34  LNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAP 93
           L+  +D   +  P   PH      + V   +  +GE R   LV P +   +   +SV AP
Sbjct: 73  LSERMDALTVVDPRPHPHGRAFFGAWVTIED-DEGEARTFRLVGPDEFDVAAGLISVEAP 131

Query: 94  VGAALLGLRVGDSIHWELPGGVATHLEVLELEYQP 128
           +G ALLG + GD++ +  P G A  L ++ + + P
Sbjct: 132 LGRALLGKQEGDTVLFLRPAGEA-ELTIMAVRWSP 165


>UniRef50_C1CW74 Putative transcription elongation factor n=1 Tax=Deinococcus
           deserti VCD115 RepID=C1CW74_DEIDV
          Length = 162

 Score = 40.8 bits (94), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 3/80 (3%)

Query: 38  LDRAQMCSPEEMPHDVVTMNSRVKFRNLSDG---EVRVRTLVYPAKMTDSNTQLSVMAPV 94
           L RA +   E++P   V + S V   +   G   +V++ + V  + MT+  TQ+S  +PV
Sbjct: 71  LARAVIVEEEDLPRGQVAVGSVVMLEDDKHGRQLQVQLVSAVEISAMTEGVTQVSDDSPV 130

Query: 95  GAALLGLRVGDSIHWELPGG 114
           G AL+G R G++   EL  G
Sbjct: 131 GKALMGRREGETFDVELEAG 150


>UniRef50_D0LKY5 Transcription elongation factor n=1 Tax=Haliangium ochraceum DSM
           14365 RepID=D0LKY5_HALO1
          Length = 169

 Score = 40.4 bits (93), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 23/93 (24%), Positives = 47/93 (50%), Gaps = 1/93 (1%)

Query: 36  AELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVG 95
           A+L  +++  P ++  + V   + V   ++  G+    T+V   +    N ++SV APV 
Sbjct: 68  AKLALSEVIDPTKLSGERVKFGATVTVEDIDTGDEATYTIVGEHEADIKNKRISVTAPVA 127

Query: 96  AALLGLRVGDSIHWELPGGVATHLEVLELEYQP 128
            AL+G  +GD    + P G     E++++++ P
Sbjct: 128 RALIGKAIGDETQVQTPKGTRA-FEIVDVKWLP 159


>UniRef50_Q03RN4 Transcription elongation factor n=1 Tax=Lactobacillus brevis ATCC
           367 RepID=Q03RN4_LACBA
          Length = 132

 Score = 40.0 bits (92), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 1/80 (1%)

Query: 38  LDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAA 97
           L  AQ+   ++   D +T+  +V F+   D E    T+V  A+    + ++S  +P+   
Sbjct: 47  LQYAQIIDNDDTDKDEITVGKKVTFQE-DDDEPEEYTIVGAAEADPMSGKISNDSPIAKG 105

Query: 98  LLGLRVGDSIHWELPGGVAT 117
           LLG RVG+++ +  PGG  T
Sbjct: 106 LLGHRVGETVTFPTPGGDMT 125


>UniRef50_D1CDC6 Transcription elongation factor n=1 Tax=Thermobaculum terrenum ATCC
           BAA-798 RepID=D1CDC6_THET1
          Length = 159

 Score = 40.0 bits (92), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 6/91 (6%)

Query: 38  LDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPA---KMTDSNTQLSVMAPV 94
           L  A++      P   V + S+V      +G     T+V  A   +  D   ++S  + V
Sbjct: 72  LANAEVIDRSAQPAGTVGLGSKVTVEE--NGRTYTYTIVDGAEAGRGRDGEVRISSKSAV 129

Query: 95  GAALLGLRVGDSIHWELPGGVATHLEVLELE 125
           G+ALLG RVGDS+  E+P G  T  ++L +E
Sbjct: 130 GSALLGRRVGDSVEVEVPAGKLT-FKILSVE 159


>UniRef50_UPI0001C37CEA transcription elongation factor GreA n=1 Tax=Ruminococcus
           flavefaciens FD-1 RepID=UPI0001C37CEA
          Length = 156

 Score = 40.0 bits (92), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 22/87 (25%), Positives = 42/87 (48%), Gaps = 1/87 (1%)

Query: 38  LDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAA 97
           +D A++     +  D + M+S++  + L  G++   T+V          ++S  +P+G A
Sbjct: 69  IDNAEIVDDSNISVDEIGMSSKITIKRLDTGKIETFTIVSTNHANVREGKISDASPIGKA 128

Query: 98  LLGLRVGDSIHWELPGGVATHLEVLEL 124
            +  RVGD    + P G     EV+E+
Sbjct: 129 AMKKRVGDVFIVDAPAG-ELKFEVVEI 154


>UniRef50_B2V1C0 Transcription elongation factor n=28 Tax=Clostridium
           RepID=B2V1C0_CLOBA
          Length = 155

 Score = 40.0 bits (92), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 23/86 (26%), Positives = 46/86 (53%), Gaps = 1/86 (1%)

Query: 41  AQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLG 100
           A +    E+    + +NS+ + + + D +  V TLV    +   N  +S+ + +G AL+G
Sbjct: 71  ATVIDDTEIDKSSLGINSKARIKFVEDDDEDVITLVTTMDLDPENMLISIESDLGKALMG 130

Query: 101 LRVGDSIHWELPGGVATHLEVLELEY 126
            + G+++  E PG   T +++LE+ Y
Sbjct: 131 KKAGETVEVEAPGAKYT-VKILEILY 155


>UniRef50_A0LK20 Transcription elongation factor greA n=1 Tax=Syntrophobacter
           fumaroxidans MPOB RepID=GREA_SYNFM
          Length = 156

 Score = 40.0 bits (92), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 1/91 (1%)

Query: 34  LNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAP 93
           L  ++   ++  P +  +      S V   +   GEV    LV P +    +  +SV++P
Sbjct: 65  LCQKMGECEIVEPSDNDNGRAIFGSTVVVEDTETGEVTSYRLVGPYEADVQSGTISVVSP 124

Query: 94  VGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
           +G AL+G   G+ I  + P GV  ++EVLE+
Sbjct: 125 LGKALIGKEEGEEIRVQTPKGV-RNIEVLEI 154


>UniRef50_UPI0001C3129D transcription elongation factor GreA n=1 Tax=Conexibacter woesei
           DSM 14684 RepID=UPI0001C3129D
          Length = 161

 Score = 39.7 bits (91), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 24/92 (26%), Positives = 45/92 (48%)

Query: 34  LNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAP 93
           L  +L  A +     +  DVV + S V+  +   G+     +V  A+   +  +LS  +P
Sbjct: 66  LEEKLRAATVIDSRSVGTDVVGIGSSVQVADSQSGKSDTYVIVGSAEANPAERKLSNESP 125

Query: 94  VGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
           VG AL+G + G++   +LP G    L + +++
Sbjct: 126 VGKALIGRKAGETATVQLPNGKQRELRITKID 157


>UniRef50_Q817Z6 Transcription elongation factor greA n=141 Tax=cellular organisms
           RepID=GREA_BACCR
          Length = 158

 Score = 39.3 bits (90), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 19/62 (30%), Positives = 35/62 (56%)

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
           VVT+   V F+ L +G+    T+V  A+      ++S  +P+  +LLG ++G+ +  + P
Sbjct: 87  VVTLGKTVTFKELPNGDEEAYTIVGSAEADPFEGRISNDSPIAKSLLGKQIGEKVTIQTP 146

Query: 113 GG 114
           GG
Sbjct: 147 GG 148


>UniRef50_Q2Z001 Transcription elongation factor n=1 Tax=uncultured candidate
           division OP8 bacterium RepID=Q2Z001_9BACT
          Length = 156

 Score = 38.9 bits (89), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 22/93 (23%), Positives = 44/93 (47%), Gaps = 1/93 (1%)

Query: 34  LNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAP 93
           L   +  A +  P ++  + V   +RV  +NL  GE  V  LV   +       +S+ +P
Sbjct: 65  LQGRISHAAVIDPSKLSGNRVVFGARVFLKNLDTGEPIVYRLVGEDEADIEQGSISITSP 124

Query: 94  VGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
           +   L+   VG+     +P G+ +  E++++E+
Sbjct: 125 LARGLIRREVGEQAKIAVPSGIKS-FEIVKIEF 156


>UniRef50_A0AIU5 Transcription elongation factor greA n=99 Tax=Bacteria
           RepID=GREA_LISW6
          Length = 160

 Score = 38.9 bits (89), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 22/74 (29%), Positives = 37/74 (50%)

Query: 41  AQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLG 100
           AQ+    E  + +VT+ + V F  L DGE    T+V  A+      ++S  +P+   LLG
Sbjct: 75  AQIIDAAEAHNGLVTLGNTVTFIELPDGEEETYTIVGSAEADPFEGKISNDSPIAKGLLG 134

Query: 101 LRVGDSIHWELPGG 114
            + G+ +  + P G
Sbjct: 135 HKEGEEVTIQTPAG 148


>UniRef50_A5V3E1 Transcription elongation factor greA n=13 Tax=Proteobacteria
           RepID=GREA_SPHWW
          Length = 158

 Score = 38.9 bits (89), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 5/98 (5%)

Query: 30  IADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNT-QL 88
           IAD +   L RAQ+  P  +  D +   + V    L D E  VR  +      D+ T ++
Sbjct: 64  IAD-IEDRLSRAQVIDPSMLSGDKIVFGATVTL--LDDDEKPVRYQIVGQTEADAKTGKI 120

Query: 89  SVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
           S  +P+G AL+G +V D +   +P G   +L V ++E+
Sbjct: 121 SYNSPLGRALIGKKVDDEVEVTVPSGDRFYL-VSKIEF 157


>UniRef50_Q0BR49 Transcription elongation factor greB n=4 Tax=cellular organisms
           RepID=Q0BR49_GRABC
          Length = 169

 Score = 38.9 bits (89), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 5/99 (5%)

Query: 34  LNAELDRAQMCSPEEMPH-DVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMA 92
           L   L+ A +  P   PH D +   + V + N +D  V+V T+V   +   +  ++S+++
Sbjct: 74  LTKRLENAVVIDPATQPHKDRIYFGATVTYINAADETVQV-TIVGADEADMALGRISLLS 132

Query: 93  PVGAALLGLRVGDSIHWELPGGVATH-LEVLELEYQPEA 130
           PV  ALLG   GD +    P  V T  L++L+++Y+P A
Sbjct: 133 PVAKALLGASKGDEVTVITP--VKTEILDILDVDYRPLA 169


>UniRef50_Q67JL1 Transcription elongation factor n=2 Tax=Clostridiales
           RepID=Q67JL1_SYMTH
          Length = 157

 Score = 38.5 bits (88), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 21/68 (30%), Positives = 37/68 (54%)

Query: 51  HDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWE 110
            +VV + S V  R+L  G+    T+V   +   ++ ++S  +PVG A++G RVG  +  +
Sbjct: 84  QEVVVLGSTVVLRDLEYGDEHTYTIVGTTEADPAHNRISNESPVGRAIMGQRVGTVVAVD 143

Query: 111 LPGGVATH 118
            P GV  +
Sbjct: 144 APDGVFKY 151


>UniRef50_A9WK05 Transcription elongation factor greA n=6 Tax=Chloroflexi (class)
           RepID=GREA_CHLAA
          Length = 157

 Score = 38.5 bits (88), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 38/78 (48%)

Query: 38  LDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAA 97
           L RA++   ++  +  V + S V  R   DG     T+V  A+      ++S  +P+GAA
Sbjct: 71  LSRAEVIDEDQASNGEVRVGSSVTVRFEDDGTEETWTIVGSAEANPRQGRISNESPLGAA 130

Query: 98  LLGLRVGDSIHWELPGGV 115
           LLG R  + +    P GV
Sbjct: 131 LLGKRARNKVTVHTPSGV 148


>UniRef50_C1F9R4 Transcription elongation factor GreA n=1 Tax=Acidobacterium
           capsulatum ATCC 51196 RepID=C1F9R4_ACIC5
          Length = 165

 Score = 38.5 bits (88), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 1/76 (1%)

Query: 49  MPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIH 108
           +PHD V   S V+  + S  E     LV   +   S   +S  +P+G AL+G +VGD+  
Sbjct: 75  IPHDRVAFGSTVEVFDTSKDEKIEYKLVTSEESDVSKGLISTTSPIGRALIGKQVGDTAT 134

Query: 109 WELPGGVATHLEVLEL 124
              P G    LEVL+L
Sbjct: 135 VVTPSG-NRELEVLKL 149


>UniRef50_B2S1W7 Transcription elongation factor greA n=6 Tax=Treponema
           RepID=GREA_TREPS
          Length = 162

 Score = 38.5 bits (88), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 23/91 (25%), Positives = 45/91 (49%), Gaps = 4/91 (4%)

Query: 34  LNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAP 93
           L  E++RAQ+  P  +    V+  + +  +N + GE    T++ P +       +S M+P
Sbjct: 68  LQEEIERAQVFDPTTVVAGRVSFGTVISLKNHTSGEDETYTILGPWESAPERGIISYMSP 127

Query: 94  VGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
           +G+ LL  + G+ + +     V  H +V E+
Sbjct: 128 LGSNLLNRKTGEQLAFT----VGEHEKVYEI 154


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

UniRef50_P0AFW6 Regulator of nucleoside diphosphate kinase n=155...   193   1e-48
UniRef50_C5S652 GreA/GreB family elongation factor n=2 Tax=Prote...   190   1e-47
UniRef50_Q2LTP9 Transcription elongation factor n=2 Tax=Deltapro...   190   2e-47
UniRef50_Q3BX42 Regulator of nucleoside diphosphate kinase n=9 T...   183   2e-45
UniRef50_A6VVR5 GreA/GreB family elongation factor n=15 Tax=Prot...   179   3e-44
UniRef50_Q6MQZ8 Regulator of nucleoside diphosphate kinase n=1 T...   177   8e-44
UniRef50_B5EI69 GreA/GreB family elongation factor n=6 Tax=Desul...   173   1e-42
UniRef50_B8GS58 GreA/GreB family elongation factor n=22 Tax=Prot...   172   3e-42
UniRef50_A0LL17 GreA/GreB family elongation factor n=3 Tax=Bacte...   170   1e-41
UniRef50_Q1H3Z9 GreA/GreB family elongation factor n=1 Tax=Methy...   168   4e-41
UniRef50_Q7MD62 Transcription elongation factor n=10 Tax=Proteob...   166   2e-40
UniRef50_A4XNX9 GreA/GreB family elongation factor n=16 Tax=Bact...   165   5e-40
UniRef50_B5JTX6 Transcription elongation factor n=1 Tax=gamma pr...   163   2e-39
UniRef50_B9MBQ3 GreA/GreB family elongation factor n=6 Tax=Betap...   162   4e-39
UniRef50_Q3K4S3 Regulator of nucleoside diphosphate kinase n=2 T...   161   5e-39
UniRef50_C6RP41 GreA/GreB family elongation factor n=4 Tax=Acine...   161   5e-39
UniRef50_Q3SMM4 GreA/GreB family elongation factor n=1 Tax=Thiob...   159   3e-38
UniRef50_B8G0E1 GreA/GreB family elongation factor n=2 Tax=Desul...   158   3e-38
UniRef50_B0SEQ9 Transcription elongation factor n=2 Tax=Leptospi...   157   9e-38
UniRef50_C9P6Y2 Regulator of nucleoside diphosphate kinase n=1 T...   156   2e-37
UniRef50_B9NGJ6 Predicted protein n=12 Tax=cellular organisms Re...   155   4e-37
UniRef50_B2SQJ5 Regulator of nucleoside diphosphate kinase n=8 T...   155   4e-37
UniRef50_A9GAI2 Regulator of nucleoside diphosphate kinase n=1 T...   155   6e-37
UniRef50_A5F052 Regulator of nucleoside diphosphate kinase n=31 ...   154   1e-36
UniRef50_A9MBQ4 GreA/GreB family elongation factor n=36 Tax=Bruc...   153   2e-36
UniRef50_Q11P04 Transcription elongation factor n=1 Tax=Cytophag...   152   3e-36
UniRef50_Q4KB20 Acetyltransferase, GNAT family family n=9 Tax=Ba...   152   3e-36
UniRef50_A6C278 Nucleoside diphosphate kinase regulator protein,...   152   3e-36
UniRef50_Q74EX3 Nucleoside diphosphate kinase regulator protein,...   151   4e-36
UniRef50_Q13WN5 GreA/GreB family elongation factor n=50 Tax=Burk...   151   5e-36
UniRef50_C0N448 Putative uncharacterized protein n=1 Tax=Methylo...   150   1e-35
UniRef50_C3X2V3 GreA/GreB family elongation factor n=2 Tax=Oxalo...   149   2e-35
UniRef50_A6X582 GreA/GreB family elongation factor n=3 Tax=Rhizo...   149   3e-35
UniRef50_C6X5Q8 Transcription elongation factor n=1 Tax=Flavobac...   146   3e-34
UniRef50_B3PF63 Regulator of nucleoside diphosphate kinase n=1 T...   145   4e-34
UniRef50_A6GQE5 Nucleoside diphosphate kinase regulator n=1 Tax=...   145   5e-34
UniRef50_B8IFL5 GreA/GreB family elongation factor n=8 Tax=Methy...   143   2e-33
UniRef50_D1SYS0 GreA/GreB family elongation factor n=1 Tax=Acido...   142   4e-33
UniRef50_A1TUC9 GreA/GreB family elongation factor n=4 Tax=Burkh...   141   7e-33
UniRef50_Q5P744 Transcription elongation factor n=3 Tax=Proteoba...   141   7e-33
UniRef50_A5V983 GreA/GreB family elongation factor n=1 Tax=Sphin...   140   1e-32
UniRef50_A5VGM9 GreA/GreB family elongation factor n=1 Tax=Sphin...   139   2e-32
UniRef50_A1U1V6 GreA/GreB family elongation factor n=2 Tax=Marin...   138   4e-32
UniRef50_Q3SU57 GreA/GreB family elongation factor n=9 Tax=Brady...   138   6e-32
UniRef50_C6WYK0 GreA/GreB family elongation factor n=2 Tax=Methy...   136   2e-31
UniRef50_B0T7C4 GreA/GreB family elongation factor n=1 Tax=Caulo...   135   3e-31
UniRef50_A7IJH2 GreA/GreB family elongation factor n=4 Tax=Rhizo...   133   1e-30
UniRef50_A7HFE1 GreA/GreB family elongation factor n=1 Tax=Anaer...   133   2e-30
UniRef50_A8LN19 GreA/GreB family elongation factor n=8 Tax=Alpha...   132   3e-30
UniRef50_A9EFF1 GreA/GreB family elongation factor n=1 Tax=Ocean...   131   7e-30
UniRef50_Q98F06 Nucleoside diphosphate kinase regulator n=2 Tax=...   130   1e-29
UniRef50_A7HAZ2 GreA/GreB family elongation factor n=5 Tax=Myxoc...   130   1e-29
UniRef50_Q0BZP7 Regulatory protein n=1 Tax=Hyphomonas neptunium ...   130   1e-29
UniRef50_B7L307 GreA/GreB family elongation factor n=1 Tax=Methy...   129   2e-29
UniRef50_B0T793 GreA/GreB family elongation factor n=1 Tax=Caulo...   129   2e-29
UniRef50_C6VSR5 GreA/GreB family elongation factor n=2 Tax=Sphin...   127   9e-29
UniRef50_A4BB58 Nucleoside diphosphate kinase regulator n=1 Tax=...   126   2e-28
UniRef50_Q2GA51 GreA/GreB family elongation factor n=1 Tax=Novos...   125   4e-28
UniRef50_Q5QX12 Transcription elongation factor family protein n...   124   8e-28
UniRef50_B4RF21 Transcription elongation factor n=2 Tax=cellular...   123   1e-27
UniRef50_Q15Z69 GreA/GreB family elongation factor n=1 Tax=Pseud...   123   2e-27
UniRef50_C6XWY5 Transcription elongation factor GreA/GreB domain...   122   3e-27
UniRef50_Q98F07 Nucleoside diphosphate kinase regulator; Rnk n=2...   122   4e-27
UniRef50_C0A6F4 GreA/GreB family elongation factor n=1 Tax=Opitu...   121   7e-27
UniRef50_B4W8F1 Putative uncharacterized protein n=1 Tax=Brevund...   119   3e-26
UniRef50_Q930S2 Putative uncharacterized protein n=1 Tax=Sinorhi...   119   4e-26
UniRef50_B1ZU20 GreA/GreB family elongation factor n=1 Tax=Opitu...   118   5e-26
UniRef50_A6EIL5 Nucleoside diphosphate kinase regulator protein,...   117   1e-25
UniRef50_A3PS97 GreA/GreB family elongation factor n=4 Tax=Rhodo...   117   1e-25
UniRef50_A4CMB9 Nucleoside diphosphate kinase regulator n=1 Tax=...   114   6e-25
UniRef50_C7CFG6 Putative regulator n=1 Tax=Methylobacterium exto...   113   1e-24
UniRef50_A7HXN2 GreA/GreB family elongation factor n=1 Tax=Parvi...   113   1e-24
UniRef50_A5FHU8 GreA/GreB family elongation factor n=1 Tax=Flavo...   113   2e-24
UniRef50_B8IHN9 GreA/GreB family elongation factor n=1 Tax=Methy...   112   3e-24
UniRef50_Q11G80 GreA/GreB family elongation factor n=1 Tax=Chela...   107   9e-23
UniRef50_C0QKN0 Transcription elongation factor n=1 Tax=Desulfob...   107   1e-22
UniRef50_A6EMP4 Transcription elongation factor n=4 Tax=Bacteroi...   106   2e-22
UniRef50_B4RBL2 Transcription elongation factor n=1 Tax=Phenylob...   105   4e-22
UniRef50_A0LZA7 Transcription elongation factor n=1 Tax=Gramella...   105   4e-22
UniRef50_B1ZD84 GreA/GreB family elongation factor n=4 Tax=Methy...   104   6e-22
UniRef50_A6LPL4 Transcription elongation factor greA n=30 Tax=Cl...   104   9e-22
UniRef50_UPI00016C498C transcription elongation factor greA n=1 ...   104   9e-22
UniRef50_P64276 Transcription elongation factor greA n=48 Tax=de...   104   1e-21
UniRef50_Q4HT85 Transcription elongation factor n=1 Tax=Campylob...   104   1e-21
UniRef50_D0J9T5 Transcription elongation factor n=55 Tax=Bacteri...   103   2e-21
UniRef50_A5FRA2 Transcription elongation factor n=3 Tax=Dehaloco...   102   3e-21
UniRef50_Q13CU9 Putative uncharacterized protein n=1 Tax=Rhodops...   102   3e-21
UniRef50_D2R891 Transcription elongation factor GreA n=1 Tax=Pir...   102   4e-21
UniRef50_Q97EB6 Transcription elongation factor greA n=6 Tax=Clo...   101   8e-21
UniRef50_A5FHJ3 GreA/GreB family elongation factor n=3 Tax=Flavo...   100   2e-20
UniRef50_A7HXN3 GreA/GreB family elongation factor n=1 Tax=Parvi...    99   3e-20
UniRef50_Q04EK0 Transcription elongation factor greA n=4 Tax=Bac...    99   4e-20
UniRef50_Q3Z8E7 Transcription elongation factor greA n=2 Tax=Deh...    96   2e-19
UniRef50_C0QWD9 Transcription elongation factor n=2 Tax=Brachysp...    95   7e-19
UniRef50_Q30T56 Transcription elongation factor n=3 Tax=Campylob...    95   1e-18
UniRef50_Q3ATA7 Transcription elongation factor greA n=13 Tax=Ba...    94   1e-18
UniRef50_C1ZBG3 Transcription elongation factor n=1 Tax=Planctom...    91   7e-18
UniRef50_C6WVB7 GreA/GreB family elongation factor n=2 Tax=Methy...    91   1e-17
UniRef50_Q0B0N4 Transcription elongation factor greA n=6 Tax=Clo...    91   1e-17
UniRef50_C6XVH8 Transcription elongation factor n=1 Tax=Pedobact...    89   4e-17
UniRef50_C4L6P4 GreA/GreB family elongation factor n=1 Tax=Exigu...    86   2e-16
UniRef50_B9KZF4 Transcription elongation factor greA n=2 Tax=The...    84   1e-15
UniRef50_C0QME5 GreA2 n=1 Tax=Desulfobacterium autotrophicum HRM...    82   6e-15
UniRef50_A5D4X0 Putative uncharacterized protein n=1 Tax=Pelotom...    79   6e-14

Sequences not found previously or not previously below threshold:

UniRef50_A8HR94 Transcription elongation factor greA n=5 Tax=Pro...    97   1e-19
UniRef50_Q1H282 GreA/GreB family elongation factor n=2 Tax=Prote...    97   1e-19
UniRef50_A3ESJ0 Transcription elongation factor n=4 Tax=Bacteria...    97   2e-19
UniRef50_Q7UVA0 Transcription elongation factor greA n=3 Tax=Pla...    97   2e-19
UniRef50_D1B632 Transcription elongation factor n=4 Tax=Synergis...    96   4e-19
UniRef50_B1MX52 Transcription elongation factor greA n=11 Tax=Fi...    96   4e-19
UniRef50_UPI0001C3129D transcription elongation factor GreA n=1 ...    95   5e-19
UniRef50_B3E3H5 Transcription elongation factor greA n=19 Tax=Pr...    95   9e-19
UniRef50_A0AIU5 Transcription elongation factor greA n=99 Tax=Ba...    93   2e-18
UniRef50_B2S6W5 Transcription elongation factor greA n=39 Tax=Ba...    93   2e-18
UniRef50_B9KH08 Transcription elongation factor n=9 Tax=Ricketts...    93   3e-18
UniRef50_D0LKY5 Transcription elongation factor n=1 Tax=Haliangi...    92   4e-18
UniRef50_A9WK05 Transcription elongation factor greA n=6 Tax=Chl...    92   5e-18
UniRef50_C9KJ19 Transcription elongation factor n=1 Tax=Mitsuoke...    92   6e-18
UniRef50_Q2LR03 Transcription elongation factor greA n=1 Tax=Syn...    91   1e-17
UniRef50_Q817Z6 Transcription elongation factor greA n=141 Tax=c...    90   1e-17
UniRef50_Q057J4 Transcription elongation factor greA n=20 Tax=Pr...    90   2e-17
UniRef50_A8F083 Transcription elongation factor greA n=13 Tax=Ri...    90   2e-17
UniRef50_C9RKD0 Transcription elongation factor n=1 Tax=Fibrobac...    90   3e-17
UniRef50_Q0A765 Transcription elongation factor greA n=23 Tax=Pr...    89   4e-17
UniRef50_Q725M4 Transcription elongation factor greA n=4 Tax=Des...    88   8e-17
UniRef50_Q67JL1 Transcription elongation factor n=2 Tax=Clostrid...    88   8e-17
UniRef50_D1PEW3 Transcription elongation factor n=1 Tax=Prevotel...    88   9e-17
UniRef50_A0LK20 Transcription elongation factor greA n=1 Tax=Syn...    88   1e-16
UniRef50_Q1LSK1 Transcription elongation factor greA n=16 Tax=Pr...    87   2e-16
UniRef50_C9RNS9 GreA/GreB family elongation factor n=1 Tax=Fibro...    87   2e-16
UniRef50_C7PP41 Transcription elongation factor n=1 Tax=Chitinop...    87   2e-16
UniRef50_A8SDG2 Transcription elongation factor n=2 Tax=Clostrid...    86   4e-16
UniRef50_Q01RT9 GreA/GreB family elongation factor n=2 Tax=Acido...    85   5e-16
UniRef50_C4XLU8 Transcription elongation factor greA n=11 Tax=De...    85   5e-16
UniRef50_C7GYY1 Transcription elongation factor n=1 Tax=Eubacter...    85   1e-15
UniRef50_UPI0001C37CEA transcription elongation factor GreA n=1 ...    84   1e-15
UniRef50_C0JZV3 Transcription elongation factor GreA n=1 Tax=unc...    84   1e-15
UniRef50_B4RBL3 Transcription elongation factor GreA/GreB family...    84   1e-15
UniRef50_Q2Z001 Transcription elongation factor n=1 Tax=uncultur...    84   2e-15
UniRef50_Q04HS9 Transcription elongation factor greA n=90 Tax=Ba...    84   2e-15
UniRef50_A3HZU2 Transcription elongation factor GreB n=2 Tax=Bac...    83   2e-15
UniRef50_A0M1N1 GreA-like transcription elongation factor n=3 Ta...    83   3e-15
UniRef50_Q1H0G6 GreA/GreB family elongation factor n=3 Tax=Prote...    83   3e-15
UniRef50_Q8ZJH2 Transcription elongation factor greB n=165 Tax=P...    83   3e-15
UniRef50_Q5SKM1 Transcription elongation factor n=5 Tax=Thermus ...    83   3e-15
UniRef50_A9BFC0 Transcription elongation factor greA n=12 Tax=Th...    83   3e-15
UniRef50_B0P8A6 Transcription elongation factor n=1 Tax=Anaerotr...    83   4e-15
UniRef50_D1B0C0 Transcription elongation factor n=4 Tax=Campylob...    83   4e-15
UniRef50_B9XEY1 GreA/GreB family elongation factor n=1 Tax=bacte...    82   4e-15
UniRef50_C1XQ58 Transcription elongation factor n=2 Tax=Meiother...    82   4e-15
UniRef50_A6H247 Transcription elongation factor greA n=33 Tax=Ba...    82   5e-15
UniRef50_C1F9R4 Transcription elongation factor GreA n=1 Tax=Aci...    82   5e-15
UniRef50_Q2S2N3 Transcription elongation factor n=1 Tax=Saliniba...    82   5e-15
UniRef50_A5V3E1 Transcription elongation factor greA n=13 Tax=Pr...    82   6e-15
UniRef50_A7HDS3 Transcription elongation factor GreB n=3 Tax=Myx...    82   7e-15
UniRef50_C8S319 GreA/GreB family elongation factor n=1 Tax=Rhodo...    81   7e-15
UniRef50_Q03RN4 Transcription elongation factor n=1 Tax=Lactobac...    81   1e-14
UniRef50_B4UCU9 Transcription elongation factor greA n=588 Tax=B...    81   1e-14
UniRef50_Q1AU03 Transcription elongation factor n=1 Tax=Rubrobac...    80   2e-14
UniRef50_D2RL35 GreA/GreB family elongation factor n=3 Tax=Veill...    80   2e-14
UniRef50_Q0BR49 Transcription elongation factor greB n=4 Tax=cel...    80   2e-14
UniRef50_A6SZ83 Transcription elongation factor, greA family n=2...    80   2e-14
UniRef50_Q1PYP5 Transcription elongation factor n=1 Tax=Candidat...    80   2e-14
UniRef50_B1I1G7 GreA/GreB family elongation factor n=1 Tax=Candi...    80   3e-14
UniRef50_Q1J0L4 Transcription elongation factor n=3 Tax=Deinococ...    80   3e-14
UniRef50_Q2GD99 Transcription elongation factor greA n=2 Tax=Neo...    79   3e-14
UniRef50_Q848L1 GreA n=1 Tax=uncultured bacterium RepID=Q848L1_9...    79   4e-14
UniRef50_Q096W9 Transcription elongation factor GreB n=1 Tax=Sti...    79   5e-14
UniRef50_B5Y9H5 Transcription elongation factor n=1 Tax=Coprothe...    79   5e-14
UniRef50_Q4K5S3 Transcription elongation factor GreB n=3 Tax=Pse...    78   8e-14
UniRef50_C7N7T1 Transcription elongation factor n=1 Tax=Slackia ...    78   8e-14
UniRef50_Q88DU7 Transcription elongation factor greA n=83 Tax=Pr...    78   1e-13
UniRef50_B2V1C0 Transcription elongation factor n=28 Tax=Clostri...    77   1e-13
UniRef50_B1H062 Transcription elongation factor n=1 Tax=uncultur...    77   2e-13
UniRef50_D0WJ76 Transcription elongation factor n=1 Tax=Slackia ...    77   2e-13
UniRef50_Q1CX76 Transcription elongation factor, GreA/GreB famil...    77   2e-13
UniRef50_B2KBD2 GreA/GreB family elongation factor n=1 Tax=Elusi...    77   2e-13
UniRef50_Q4A759 Transcription elongation factor greA n=4 Tax=Myc...    77   2e-13
UniRef50_B9L0L0 Transcription elongation factor greA n=1 Tax=The...    76   3e-13
UniRef50_C4Z9L9 Transcription elongation factor n=3 Tax=Firmicut...    76   4e-13
UniRef50_A2RGA4 Transcription elongation factor greA n=111 Tax=F...    76   4e-13
UniRef50_Q5SJG6 Anti-cleavage anti-GreA transcription factor Gfh...    76   4e-13
UniRef50_B2S1W7 Transcription elongation factor greA n=6 Tax=Tre...    76   5e-13
UniRef50_D1C6T4 Transcription elongation factor n=1 Tax=Sphaerob...    76   5e-13
UniRef50_C6X3W9 Transcription elongation factor GreB n=1 Tax=Fla...    76   5e-13
UniRef50_D1CDC6 Transcription elongation factor n=1 Tax=Thermoba...    75   6e-13
UniRef50_D0J5N8 Kelongation factor GreB n=4 Tax=Proteobacteria R...    75   6e-13
UniRef50_D2QK34 GreA/GreB family elongation factor n=1 Tax=Spiro...    75   6e-13
UniRef50_A6NPJ1 Putative uncharacterized protein n=1 Tax=Bactero...    75   7e-13
UniRef50_B4UMG4 GreA/GreB family elongation factor n=4 Tax=Anaer...    75   8e-13
UniRef50_Q9HZY5 Transcription elongation factor greB n=13 Tax=Ga...    75   9e-13
UniRef50_Q88Q22 Transcription elongation factor, putative n=11 T...    75   9e-13
UniRef50_UPI0001746B72 nucleoside diphosphate kinase regulator p...    73   2e-12
UniRef50_A6NZ08 Transcription elongation factor n=1 Tax=Bacteroi...    73   2e-12
UniRef50_B5ZLJ0 Transcription elongation factor GreB n=5 Tax=Pro...    73   2e-12
UniRef50_Q98Q16 Transcription elongation factor greA n=3 Tax=Myc...    73   3e-12
UniRef50_B9XT30 GreA/GreB family elongation factor n=1 Tax=bacte...    73   3e-12
UniRef50_A4E9C2 Transcription elongation factor n=1 Tax=Collinse...    73   4e-12
UniRef50_Q8P7P8 Transcription elongation factor greB n=53 Tax=Pr...    72   5e-12
UniRef50_A6W1U9 Transcription elongation factor GreB n=17 Tax=Ga...    72   5e-12
UniRef50_Q2Y7V5 GreA/GreB family elongation factor n=33 Tax=cell...    72   5e-12
UniRef50_A0LES5 GreA/GreB family elongation factor n=1 Tax=Syntr...    72   6e-12
UniRef50_A6X2G5 GreA/GreB family elongation factor n=2 Tax=Ochro...    71   7e-12
UniRef50_Q1QUF3 GreA/GreB family elongation factor n=1 Tax=Chrom...    71   8e-12
UniRef50_B3DVF3 Transcription elongation factor GreA fused to un...    71   9e-12
UniRef50_B4D5K0 GreA/GreB family elongation factor n=1 Tax=Chtho...    71   9e-12
UniRef50_A5CVW9 Transcription elongation factor greA n=4 Tax=Gam...    71   1e-11
UniRef50_A5VME9 Transcription elongation factor GreA n=49 Tax=La...    71   1e-11
UniRef50_B9E669 Transcription elongation factor n=5 Tax=Clostrid...    70   2e-11
UniRef50_C6B1R3 GreA/GreB family elongation factor n=16 Tax=cell...    70   2e-11
UniRef50_Q930S1 Putative uncharacterized protein n=1 Tax=Sinorhi...    70   2e-11
UniRef50_Q7VM42 Transcription elongation factor greB n=27 Tax=Pr...    70   2e-11
UniRef50_C8W826 Transcription elongation factor n=7 Tax=Coriobac...    70   2e-11
UniRef50_A5IYH4 Transcription elongation factor greA n=3 Tax=Myc...    70   2e-11
UniRef50_O51157 Transcription elongation factor greA n=23 Tax=Bo...    70   3e-11
UniRef50_C5BTE2 Transcription elongation factor GreA n=1 Tax=Ter...    70   3e-11
UniRef50_Q04UP0 Transcription elongation factor n=6 Tax=Leptospi...    70   3e-11
UniRef50_B1XUH7 Transcription elongation factor GreB n=2 Tax=Pol...    70   3e-11
UniRef50_Q88ZS9 Transcription elongation factor greA 1 n=7 Tax=L...    69   4e-11
UniRef50_UPI0001C31C12 transcription elongation factor GreA n=1 ...    69   4e-11
UniRef50_UPI00017427C8 transcription elongation factor GreA n=1 ...    69   5e-11
UniRef50_B9KMW2 Transcription elongation factor n=3 Tax=Rhodobac...    69   5e-11
UniRef50_A7VBG3 Putative uncharacterized protein n=1 Tax=Clostri...    69   5e-11
UniRef50_B9J7D6 Transcription elongation factor protein n=52 Tax...    68   7e-11
UniRef50_B1ZZX3 GreA/GreB family elongation factor n=3 Tax=Verru...    68   8e-11
UniRef50_B1ZQE9 GreA/GreB family elongation factor n=1 Tax=Opitu...    68   1e-10
UniRef50_C1CW74 Putative transcription elongation factor n=1 Tax...    68   1e-10
UniRef50_B7CAB2 Transcription elongation factor n=5 Tax=Erysipel...    68   1e-10
UniRef50_Q2N9J5 Transcription elongation factor n=2 Tax=Erythrob...    67   2e-10
UniRef50_Q9JVD0 Transcription elongation factor greB n=64 Tax=Ba...    66   2e-10
UniRef50_B6BTF1 GreA/GreB family elongation factor n=2 Tax=Betap...    66   2e-10
UniRef50_D1R523 Putative uncharacterized protein n=1 Tax=Parachl...    66   3e-10
UniRef50_UPI0001746370 transcript cleavage factor/unknown domain...    66   3e-10
UniRef50_B4RDE4 Transcription elongation factor GreA/GreB, famil...    66   3e-10
UniRef50_A6STV7 Transcription elongation factor GreB n=2 Tax=Oxa...    66   3e-10
UniRef50_B0VIH5 Putative transcription elongation factor n=1 Tax...    66   4e-10
UniRef50_B3PM73 Transcription elongation factor greA n=1 Tax=Myc...    66   5e-10
UniRef50_UPI0000E87FB5 transcription elongation factor GreB n=1 ...    65   5e-10
UniRef50_C1ABM5 Transcription elongation factor GreA n=1 Tax=Gem...    65   6e-10
UniRef50_Q1IXC6 GreA/GreB family elongation factor n=1 Tax=Deino...    65   6e-10
UniRef50_C0ZE34 Putative uncharacterized protein n=1 Tax=Breviba...    65   7e-10
UniRef50_B1AIU2 Transcription elongation factor greA n=28 Tax=Ur...    65   8e-10
UniRef50_P47524 Transcription elongation factor greA n=4 Tax=Myc...    65   1e-09
UniRef50_Q6MF39 Putative uncharacterized protein n=1 Tax=Candida...    65   1e-09
UniRef50_A2SJD8 Transcription elongation factor n=50 Tax=Proteob...    64   1e-09
UniRef50_A9NGN4 Transcription elongation factor greA n=7 Tax=Ach...    64   1e-09
UniRef50_C7T958 Transcription elongation factor n=4 Tax=Lactobac...    64   1e-09
UniRef50_Q2G8D8 GreA/GreB family elongation factor n=4 Tax=cellu...    64   2e-09
UniRef50_C4ZAT8 Transcription elongation factor GreA n=21 Tax=Fi...    63   3e-09
UniRef50_Q1IZY0 GreA/GreB family elongation factor n=4 Tax=Deino...    63   3e-09

>UniRef50_P0AFW6 Regulator of nucleoside diphosphate kinase n=155
           Tax=Enterobacteriaceae RepID=RNK_ECO57
          Length = 136

 Score =  193 bits (491), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 136/136 (100%), Positives = 136/136 (100%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV
Sbjct: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
           KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE
Sbjct: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120

Query: 121 VLELEYQPEAAGDYLL 136
           VLELEYQPEAAGDYLL
Sbjct: 121 VLELEYQPEAAGDYLL 136


>UniRef50_C5S652 GreA/GreB family elongation factor n=2 Tax=Proteobacteria
           RepID=C5S652_CHRVI
          Length = 171

 Score =  190 bits (483), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 65/133 (48%), Positives = 86/133 (64%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
           S+P II++ LDAER++ L+E       P  D L AEL RA++  P EMP +VV+MNS V+
Sbjct: 37  SQPKIILSSLDAERLENLIESLPRNAFPGMDELEAELARAEVVDPREMPPNVVSMNSTVR 96

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           FR +S  E    TLVYP  M  S  ++S++APVG+ALLGL  GD I W  PGG    + +
Sbjct: 97  FRVMSTNEAFTLTLVYPKDMDASGGKISILAPVGSALLGLSSGDEIEWPKPGGGVLRVRI 156

Query: 122 LELEYQPEAAGDY 134
            E+ YQPE AG+Y
Sbjct: 157 EEVTYQPERAGEY 169


>UniRef50_Q2LTP9 Transcription elongation factor n=2 Tax=Deltaproteobacteria
           RepID=Q2LTP9_SYNAS
          Length = 134

 Score =  190 bits (482), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 61/136 (44%), Positives = 85/136 (62%), Gaps = 2/136 (1%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           M++  I + + D ER++ LLE         A +L AEL  A +   EEMP DVVTMNS V
Sbjct: 1   MNKRRIYVTEQDMERLEDLLET--SKKSEYARSLEAELVNAVVVPSEEMPPDVVTMNSCV 58

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
            F +L+ G     TLVYP +   ++ ++SV+APVG+AL+GL VG +I W +P G    L 
Sbjct: 59  CFEDLTTGNRETITLVYPGQANMASGRVSVLAPVGSALIGLSVGQTIEWPMPNGRKRRLR 118

Query: 121 VLELEYQPEAAGDYLL 136
           ++E+ YQPEAAGD+ L
Sbjct: 119 IVEVLYQPEAAGDFHL 134


>UniRef50_Q3BX42 Regulator of nucleoside diphosphate kinase n=9
           Tax=Gammaproteobacteria RepID=Q3BX42_XANC5
          Length = 146

 Score =  183 bits (464), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 58/131 (44%), Positives = 84/131 (64%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFR 63
           P+I+++  D  R++ LL+ PA+   P A AL+ EL RA++  P+++P DVVTM+SR++  
Sbjct: 11  PSILVSSHDLARLEALLDSPAFNKHPAATALSDELGRARVLPPDQIPGDVVTMHSRIECE 70

Query: 64  NLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLE 123
           +   GE    TLVYP +    + ++SV+APVG+ALLGL VG SI W  P G    L V  
Sbjct: 71  DQLHGERHTLTLVYPHEADVQHGRISVLAPVGSALLGLSVGQSIDWRTPDGRDLRLRVTA 130

Query: 124 LEYQPEAAGDY 134
           +  QP AAGD+
Sbjct: 131 VHDQPAAAGDF 141


>UniRef50_A6VVR5 GreA/GreB family elongation factor n=15 Tax=Proteobacteria
           RepID=A6VVR5_MARMS
          Length = 137

 Score =  179 bits (454), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 58/136 (42%), Positives = 88/136 (64%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           M RP I I+ LDA R++ +L+  +Y+  P  D L  E++RA++  P +MP ++VTMNS V
Sbjct: 2   MQRPQITISSLDAVRLEKILDSLSYSQFPNKDDLQEEINRAEIVEPRDMPDNIVTMNSTV 61

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
            F+ LS  +   +TLVYP     +   +SV+APVG+ALLGL+ GD I W  P G    + 
Sbjct: 62  TFKVLSSEKEFSKTLVYPKDANGAEDTVSVLAPVGSALLGLKEGDQIDWPKPNGDVLSVV 121

Query: 121 VLELEYQPEAAGDYLL 136
           +++++YQPE AG++ L
Sbjct: 122 IMKVDYQPERAGEFQL 137


>UniRef50_Q6MQZ8 Regulator of nucleoside diphosphate kinase n=1 Tax=Bdellovibrio
           bacteriovorus RepID=Q6MQZ8_BDEBA
          Length = 138

 Score =  177 bits (450), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 59/135 (43%), Positives = 84/135 (62%), Gaps = 3/135 (2%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
           + P I++ D D  R+  L+ Q      P A+AL  EL RA + + +E+P +VVTMNSRV+
Sbjct: 7   TEPRILVTDQDFHRLSALVSQVEG---PFAEALEEELSRANVIAQKEIPKNVVTMNSRVQ 63

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           F +   G+    TLVYP        +LS++APVG ALLGL VG  I+W+LP G +  L+V
Sbjct: 64  FLDEVSGQESEMTLVYPQDAKLEEGRLSILAPVGIALLGLSVGQEINWKLPNGQSKKLKV 123

Query: 122 LELEYQPEAAGDYLL 136
             + YQPEA+G++ L
Sbjct: 124 QAVTYQPEASGNFDL 138


>UniRef50_B5EI69 GreA/GreB family elongation factor n=6 Tax=Desulfuromonadales
           RepID=B5EI69_GEOBB
          Length = 143

 Score =  173 bits (440), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 52/138 (37%), Positives = 86/138 (62%), Gaps = 4/138 (2%)

Query: 2   SRPTIIINDLDAERIDILLEQPA---YAGLPIADALNAELDRAQMCSPEEMPHDVVTMNS 58
           ++  +++ + D ER++ L+++              L  EL RA++  P  +P DV+TMNS
Sbjct: 7   AQRQVVVTEFDMERLEALIDKARSTQTRDSKNLKELGEELVRAEVVDPAGIPPDVITMNS 66

Query: 59  RVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATH 118
           +V  ++L   E  V TLV+P +   ++ ++S++APVG A++G R GD I W +PGG+  +
Sbjct: 67  KVCLQDLDSEEELVYTLVFPNEADLASGKISILAPVGTAMIGFRTGDRITWPVPGGM-KN 125

Query: 119 LEVLELEYQPEAAGDYLL 136
           L+V ++ YQPEAAGDY L
Sbjct: 126 LKVKKILYQPEAAGDYHL 143


>UniRef50_B8GS58 GreA/GreB family elongation factor n=22 Tax=Proteobacteria
           RepID=B8GS58_THISH
          Length = 137

 Score =  172 bits (436), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 59/133 (44%), Positives = 86/133 (64%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKF 62
           +P+I ++ LD +R++ LL+      L     L AEL+RA +  P ++P  +VTMNSRV+F
Sbjct: 4   QPSITLSSLDLDRLEHLLDSLPREALANHRQLLAELERANVVEPSQVPPTLVTMNSRVRF 63

Query: 63  RNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVL 122
           R   +G    RTLVYP+ M     ++SV+AP+G+ALLGL VGDSI W  P G   ++ ++
Sbjct: 64  RVEPEGREFQRTLVYPSGMDGDEEKISVLAPIGSALLGLSVGDSIAWPTPKGGEMNVRIM 123

Query: 123 ELEYQPEAAGDYL 135
           E+ YQPEAAG+  
Sbjct: 124 EILYQPEAAGEMH 136


>UniRef50_A0LL17 GreA/GreB family elongation factor n=3 Tax=Bacteria
           RepID=A0LL17_SYNFM
          Length = 141

 Score =  170 bits (431), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 51/140 (36%), Positives = 79/140 (56%), Gaps = 6/140 (4%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIAD-----ALNAELDRAQMCSPEEMPHDVVTM 56
            R  I ++D D +R++ L+E  +       D      L  EL +A++ +   +P D VTM
Sbjct: 3   KRRKIYVSDYDMKRLEKLIELLSEDEWDDRDTKHLQVLEEELRKAEVVAARNIPRDTVTM 62

Query: 57  NSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVA 116
           NS+V+ ++L  G   +  LV+P +      ++SV+AP+G AL+G  VGD I W +P G  
Sbjct: 63  NSKVRVKDLDTGIETIYHLVFPGEADVKQNRISVLAPIGTALIGYAVGDVIQWNVPAGT- 121

Query: 117 THLEVLELEYQPEAAGDYLL 136
             L + E+ YQPEAAGD+ L
Sbjct: 122 KKLRIEEILYQPEAAGDFHL 141


>UniRef50_Q1H3Z9 GreA/GreB family elongation factor n=1 Tax=Methylobacillus
           flagellatus KT RepID=Q1H3Z9_METFK
          Length = 138

 Score =  168 bits (427), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 58/139 (41%), Positives = 84/139 (60%), Gaps = 4/139 (2%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIAD---ALNAELDRAQMCSPEEMPHDVVTMN 57
           M +  I +   D +R+  ++EQ    G P  D    L  EL R++    E++  DVVTMN
Sbjct: 1   MLQGAIQVTSFDMDRLFSMIEQLRKNGFPETDNLARLEDELARSEEVPSEQVGADVVTMN 60

Query: 58  SRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVAT 117
           SRV  R+ ++G     TLV+P+    S  ++SV+AP+G A+LG RVGD I W +PGGV  
Sbjct: 61  SRVLLRDEANGHEMSCTLVFPSDADASANRISVVAPLGTAILGYRVGDVIDWAMPGGV-R 119

Query: 118 HLEVLELEYQPEAAGDYLL 136
              +L+++YQPEAAGD+ L
Sbjct: 120 QYRILKIDYQPEAAGDFHL 138


>UniRef50_Q7MD62 Transcription elongation factor n=10 Tax=Proteobacteria
           RepID=Q7MD62_VIBVY
          Length = 135

 Score =  166 bits (421), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 57/132 (43%), Positives = 87/132 (65%), Gaps = 2/132 (1%)

Query: 5   TIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRN 64
           +I ++ LD +RI  LLE+ A    P  + L  ELDRA + +P++MP ++VTMNS V+F  
Sbjct: 6   SICVSTLDMDRISALLEKMANLS-PELEKLENELDRANVLAPQQMPDNIVTMNSTVRFTF 64

Query: 65  LSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
           +   +V  +TLVYP ++ + +  +S+ APVG+ALLGL VG  + W +PGG    +E+LE+
Sbjct: 65  VGSDKVMEKTLVYPDQVRNPDD-VSIFAPVGSALLGLSVGQQLTWPMPGGAERTIEILEV 123

Query: 125 EYQPEAAGDYLL 136
            YQPE  G++ L
Sbjct: 124 TYQPERMGEFHL 135


>UniRef50_A4XNX9 GreA/GreB family elongation factor n=16 Tax=Bacteria
           RepID=A4XNX9_PSEMY
          Length = 135

 Score =  165 bits (417), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 64/131 (48%), Positives = 81/131 (61%), Gaps = 2/131 (1%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFR 63
           P I I  LD +R++ LL+     G P A AL AELDRA++   +E+P  +VTMNSRV  R
Sbjct: 5   PAITITRLDLQRLERLLDSLDEFG-PGAAALQAELDRAEVVGLDEVPAGLVTMNSRVHCR 63

Query: 64  NLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLE 123
             S G+    TLVYP         +S++APVG+ALLGL VG  I W  PGG    L +L 
Sbjct: 64  EESSGKDYHLTLVYPQDAGG-EGTVSILAPVGSALLGLSVGQHIDWPAPGGKQLKLTLLA 122

Query: 124 LEYQPEAAGDY 134
           +EYQPEAAG+Y
Sbjct: 123 VEYQPEAAGEY 133


>UniRef50_B5JTX6 Transcription elongation factor n=1 Tax=gamma proteobacterium
           HTCC5015 RepID=B5JTX6_9GAMM
          Length = 138

 Score =  163 bits (413), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 53/135 (39%), Positives = 80/135 (59%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
           + P I + +LD  RI+ LLE+           L  EL R ++ S +E+  DVVTMNSRVK
Sbjct: 4   THPPITLPELDVARIESLLEKLDLKAKNNHTELFEELYRCRIVSSQEVSPDVVTMNSRVK 63

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           +  L   +    TL YP +++ ++  +S++AP+G+A++GL VG  I W LP G    L +
Sbjct: 64  YTRLDTQQQSTLTLCYPDQISRADDAVSILAPIGSAIIGLSVGQIIDWPLPNGKNAPLRI 123

Query: 122 LELEYQPEAAGDYLL 136
            EL +QPE +G+Y L
Sbjct: 124 DELLFQPERSGNYTL 138


>UniRef50_B9MBQ3 GreA/GreB family elongation factor n=6 Tax=Betaproteobacteria
           RepID=B9MBQ3_DIAST
          Length = 135

 Score =  162 bits (410), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 62/133 (46%), Positives = 82/133 (61%), Gaps = 2/133 (1%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKF 62
           +P II++ LD ERI+ LLE+      P  +AL AELDRA +  P++MP +VVTMNS V+F
Sbjct: 4   KPHIILSSLDLERIEALLEKQTAP-FPGREALEAELDRADVFDPKDMPPNVVTMNSTVRF 62

Query: 63  RNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVL 122
             L  G+    TLVYP +M  S  ++SV APVG ALLGL VGD      P G    + V 
Sbjct: 63  TLLETGKTNTLTLVYPKEMDGSGDKVSVFAPVGIALLGLGVGDEFQMPSPTG-QVTVRVD 121

Query: 123 ELEYQPEAAGDYL 135
            +++QPE AG+  
Sbjct: 122 AIDFQPENAGELH 134


>UniRef50_Q3K4S3 Regulator of nucleoside diphosphate kinase n=2 Tax=Pseudomonas
           fluorescens RepID=Q3K4S3_PSEPF
          Length = 136

 Score =  161 bits (409), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 60/135 (44%), Positives = 81/135 (60%), Gaps = 2/135 (1%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRA-QMCSPEEMPHDVVTMNSR 59
           M+ P+I +  LD +R++ L++      LP   AL  ELDRA  +   +E+P DVVTMNSR
Sbjct: 1   MTAPSITLTRLDVQRLERLIDSLDDT-LPGVIALQTELDRADTLVGHDEVPADVVTMNSR 59

Query: 60  VKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHL 119
           V  R  S G+    TLVYP        ++S++APVG+ALLGL+VG  I W  PGG    L
Sbjct: 60  VHCREESSGKDYHLTLVYPKHANADEGKVSILAPVGSALLGLKVGQHIDWPAPGGKTLKL 119

Query: 120 EVLELEYQPEAAGDY 134
            +LE+E QP   GD+
Sbjct: 120 TLLEVESQPSNGGDF 134


>UniRef50_C6RP41 GreA/GreB family elongation factor n=4 Tax=Acinetobacter
           RepID=C6RP41_ACIRA
          Length = 134

 Score =  161 bits (409), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 51/134 (38%), Positives = 76/134 (56%), Gaps = 1/134 (0%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           M++P III+  D  R++ +LE  ++    I + L  EL RA++  P E+P +VV+MN+RV
Sbjct: 1   MAKPNIIISSQDLHRLETMLEHQSHMTQTI-EHLEDELARAEVVEPHEIPANVVSMNTRV 59

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
                   E     LVYP        Q++V+AP+GAA+LGL  G  I W  P G    ++
Sbjct: 60  LITIAPSTEPTEIQLVYPHDFRGDKGQVNVLAPIGAAILGLAEGQEIEWPQPDGHLMKVK 119

Query: 121 VLELEYQPEAAGDY 134
           + ++ YQPE  GDY
Sbjct: 120 IEKVLYQPEREGDY 133


>UniRef50_Q3SMM4 GreA/GreB family elongation factor n=1 Tax=Thiobacillus
           denitrificans ATCC 25259 RepID=Q3SMM4_THIDA
          Length = 138

 Score =  159 bits (403), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 62/134 (46%), Positives = 81/134 (60%), Gaps = 1/134 (0%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
           +RP I +++ D ER++ +L       LP A+AL  ELDRA++  PE MP DVVTMNSR++
Sbjct: 5   TRPAITVSERDLERLEDMLAGLPD-DLPGAEALRDELDRAEILRPEAMPADVVTMNSRIR 63

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           F     G+    TLVYP   T S  QL V  P G A+LGL VG  I W+ P G      +
Sbjct: 64  FVVEPAGKEMEMTLVYPRDFTGSPDQLPVTTPAGIAVLGLAVGQEIEWQAPNGQKVGARI 123

Query: 122 LELEYQPEAAGDYL 135
           ++L YQPE AGDY+
Sbjct: 124 VDLAYQPERAGDYM 137


>UniRef50_B8G0E1 GreA/GreB family elongation factor n=2 Tax=Desulfitobacterium
           hafniense RepID=B8G0E1_DESHD
          Length = 138

 Score =  158 bits (401), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 56/140 (40%), Positives = 79/140 (56%), Gaps = 6/140 (4%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAY----AGLPIADALNAELDRAQMCSPEEMPHDVVTM 56
           MSR  I I  +D ER+  L+ +               L  EL+ A +   E++P + +TM
Sbjct: 1   MSR-KISITAVDRERLLKLINKEREFGSAKNKDYLKDLEHELNGADVVPSEKIPGNAITM 59

Query: 57  NSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVA 116
           NSR+  ++L  GE  V TLVYP        ++S++APVG A+LG   GD I W++PGGV 
Sbjct: 60  NSRILLKDLETGEETVYTLVYPEDADLLEDKISILAPVGTAILGYLEGDIIDWKVPGGVV 119

Query: 117 THLEVLELEYQPEAAGDYLL 136
              +V ++ YQPEAAGDY L
Sbjct: 120 R-FKVEKILYQPEAAGDYHL 138


>UniRef50_B0SEQ9 Transcription elongation factor n=2 Tax=Leptospira biflexa serovar
           Patoc RepID=B0SEQ9_LEPBA
          Length = 138

 Score =  157 bits (398), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 47/137 (34%), Positives = 78/137 (56%), Gaps = 3/137 (2%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADA--LNAELDRAQMCSPEEMPHDVVTMNSR 59
           ++  I I +LD  R+  ++ + +      A+   L  E++RAQ    +++P +VVTMNS 
Sbjct: 3   TKKKISITNLDYIRLKKMILEYSKRNKTDANVQDLLGEIERAQKVDSKQIPSNVVTMNSV 62

Query: 60  VKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHL 119
           ++ +NL   E +   LVYP        Q+S++AP+  A +G + GD I W +P GV    
Sbjct: 63  IEIKNLEGIEFKEFRLVYPEDSNLDQNQISILAPIATASIGYKTGDVIFWNVPDGVYR-F 121

Query: 120 EVLELEYQPEAAGDYLL 136
           ++ E++YQPEA GD+ L
Sbjct: 122 QITEIKYQPEANGDFHL 138


>UniRef50_C9P6Y2 Regulator of nucleoside diphosphate kinase n=1 Tax=Vibrio
           metschnikovii CIP 69.14 RepID=C9P6Y2_VIBME
          Length = 136

 Score =  156 bits (395), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 54/131 (41%), Positives = 82/131 (62%), Gaps = 2/131 (1%)

Query: 5   TIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRN 64
            II++ LD +RI  L+++       + + L  ELDRA + +PEE+P DVVTMNS VKF+ 
Sbjct: 7   AIIVSTLDMDRISALMDKLPKLSKEL-ERLENELDRATVLNPEEIPADVVTMNSTVKFKF 65

Query: 65  LSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
               +V  +TLVYP  +  ++  +S+ APVG+ALLGL  G  + W +P GV   +E++++
Sbjct: 66  QGSDDVMQKTLVYPHDVKGNDD-ISIFAPVGSALLGLSKGQQLTWPMPNGVERTIEIIDI 124

Query: 125 EYQPEAAGDYL 135
             QPE  G+Y 
Sbjct: 125 IDQPERNGEYN 135


>UniRef50_B9NGJ6 Predicted protein n=12 Tax=cellular organisms RepID=B9NGJ6_POPTR
          Length = 145

 Score =  155 bits (393), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 55/136 (40%), Positives = 85/136 (62%), Gaps = 3/136 (2%)

Query: 2   SRP-TIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           SRP T+ + +LD  R++ +  +   A L   + L+A L+RA + SP+ +P DVVTMNSRV
Sbjct: 12  SRPATLYLTELDVTRLEGIASRAGTAELD--EMLDALLERAAIVSPDAIPKDVVTMNSRV 69

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
                 + + R  TLVYP     +  +LSV++P+G ALLG R GD++ + LP G A  + 
Sbjct: 70  VCALEGEAKPRDWTLVYPDDADLATGRLSVLSPIGQALLGARSGDTVDYRLPDGRAQRVT 129

Query: 121 VLELEYQPEAAGDYLL 136
           ++E+ +QPEA+G + L
Sbjct: 130 IVEIAFQPEASGQFTL 145


>UniRef50_B2SQJ5 Regulator of nucleoside diphosphate kinase n=8 Tax=Xanthomonadaceae
           RepID=B2SQJ5_XANOP
          Length = 215

 Score =  155 bits (392), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 47/130 (36%), Positives = 73/130 (56%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFR 63
           P+ +++  D  R + LL+ P++   P A AL+ EL RA++  P+++  DVVTM+SR++  
Sbjct: 83  PSTLVSSHDLARREALLDSPSFNKHPAATALSDELGRARVLPPDQIRGDVVTMHSRIECE 142

Query: 64  NLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLE 123
           +   G       V+P +    + ++ V+APVG+AL GL VG  I W  P G    L    
Sbjct: 143 DQLHGGRHTLPPVHPHEADVQHGRICVLAPVGSALGGLSVGQRIDWRTPDGRDLRLRATA 202

Query: 124 LEYQPEAAGD 133
           +  QP AAGD
Sbjct: 203 VHDQPTAAGD 212


>UniRef50_A9GAI2 Regulator of nucleoside diphosphate kinase n=1 Tax=Sorangium
           cellulosum 'So ce 56' RepID=A9GAI2_SORC5
          Length = 140

 Score =  155 bits (391), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 48/135 (35%), Positives = 74/135 (54%), Gaps = 4/135 (2%)

Query: 5   TIIINDLDAERIDILLEQPAYA---GLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
            I++ + D +R+  LLE          P  +AL  E++RA +  P ++P +VVTMNSRV+
Sbjct: 7   PIVLTEFDRDRLARLLEALRARPGGDSPNLEALEIEIERADVVKPADIPPNVVTMNSRVE 66

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
             +L   E    T+V+P      + ++SV+AP+G ALLG R  D + W  P      L +
Sbjct: 67  LVDLDTEERLCVTVVFPGNADVKSGRISVLAPMGLALLGCREADEVEWPTPS-RTRRLRI 125

Query: 122 LELEYQPEAAGDYLL 136
             + YQPEA+G + L
Sbjct: 126 ERIAYQPEASGRFDL 140


>UniRef50_A5F052 Regulator of nucleoside diphosphate kinase n=31 Tax=Vibrio
           RepID=A5F052_VIBC3
          Length = 135

 Score =  154 bits (389), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 60/131 (45%), Positives = 83/131 (63%), Gaps = 2/131 (1%)

Query: 5   TIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRN 64
           TI+++  D +RI  L++  A    P  + L  ELDRA +  P EMP DVVTMNS V+F+ 
Sbjct: 6   TIVVSTRDMDRISQLMDNLATLS-PELEKLEEELDRATVLEPAEMPEDVVTMNSTVRFKF 64

Query: 65  LSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
           L   EV  +TLVYP  +  S   +S+ APVG+ALLGL VG  + W +PGG    LE++++
Sbjct: 65  LGSDEVMEKTLVYPNDVKSSAD-VSIFAPVGSALLGLAVGQQLAWPMPGGTLKTLEIIDI 123

Query: 125 EYQPEAAGDYL 135
            YQPE AG++ 
Sbjct: 124 VYQPERAGEFH 134


>UniRef50_A9MBQ4 GreA/GreB family elongation factor n=36 Tax=Brucella
           RepID=A9MBQ4_BRUC2
          Length = 169

 Score =  153 bits (386), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 46/123 (37%), Positives = 73/123 (59%), Gaps = 1/123 (0%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
            +P I+++++D ER+  L    +     IA+ L AELDRA++ + + +P +VV M S V+
Sbjct: 7   KKPNIVVSEVDYERLMGLASNASERFEEIAEELMAELDRAKVVTAKRIPENVVQMGSTVE 66

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           FR  +DG  R  TLVYP +   +  ++S++ P+G AL+GL  G SI W    G    L V
Sbjct: 67  FR-ANDGHERRVTLVYPGEADIAKNRISILTPIGTALIGLAPGQSISWTARDGKQHELNV 125

Query: 122 LEL 124
           L++
Sbjct: 126 LKV 128


>UniRef50_Q11P04 Transcription elongation factor n=1 Tax=Cytophaga hutchinsonii ATCC
           33406 RepID=Q11P04_CYTH3
          Length = 149

 Score =  152 bits (385), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 46/133 (34%), Positives = 73/133 (54%), Gaps = 4/133 (3%)

Query: 7   IINDLDAERIDILLEQPAYAGLP---IADALNAELDRAQMCSPEEMPHDVVTMNSRVKFR 63
           IIN LD  RI   + +           A++L  EL   ++  PEE+P++VVTM+S V   
Sbjct: 18  IINKLDYSRIQQCINEAKQFKSISVVEANSLMNELKLGKLVEPEEIPNNVVTMHSIVTIV 77

Query: 64  NLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLE 123
            +   +     LVYP K    N ++S+ +P+  AL+G ++GD I W +P G+   +++  
Sbjct: 78  FMDSNKRVEFQLVYPDKADVKNNKISIFSPIATALIGYQIGDEIEWCVPAGMT-KIKIES 136

Query: 124 LEYQPEAAGDYLL 136
           + YQPEAAG + L
Sbjct: 137 IAYQPEAAGHFNL 149


>UniRef50_Q4KB20 Acetyltransferase, GNAT family family n=9 Tax=Bacteria
           RepID=Q4KB20_PSEF5
          Length = 379

 Score =  152 bits (385), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 44/131 (33%), Positives = 71/131 (54%), Gaps = 6/131 (4%)

Query: 6   IIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNL 65
           I I ++D  R++ L+    +   P    L  EL+RA +  P+++  +V+TMNSR   +  
Sbjct: 255 IYITEIDKARLESLI---VFEQGPTIVELEHELERAIVVKPQQVARNVITMNSRALLQLD 311

Query: 66  SDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
              E     LVYP     +  + SV + +GAA+LG + GD+I W +       +E+ ++ 
Sbjct: 312 D--EEIEVALVYPEDADSTAGKHSVYSDIGAAILGYQEGDTIDWRISD-RTRRIEIRKVL 368

Query: 126 YQPEAAGDYLL 136
           YQPEAAGD+ L
Sbjct: 369 YQPEAAGDFHL 379


>UniRef50_A6C278 Nucleoside diphosphate kinase regulator protein, putative n=1
           Tax=Planctomyces maris DSM 8797 RepID=A6C278_9PLAN
          Length = 137

 Score =  152 bits (384), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 49/135 (36%), Positives = 71/135 (52%), Gaps = 4/135 (2%)

Query: 1   MSRPTIIINDLDAERIDILLEQ---PAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMN 57
           M +  I I   D +R+  LL      A    P    L+AEL  A +   EE+P D+VTMN
Sbjct: 1   MPQQKIFITKTDYQRLQNLLLSDFTQAIGNKPYLSGLHAELAVAHIVESEEIPADIVTMN 60

Query: 58  SRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVAT 117
           S V+ R+L   E+   TLVYP        +LS++ P+G A+LG R+GD +      G + 
Sbjct: 61  STVRLRDLETDELETYTLVYPQDANIKEGKLSILTPIGTAILGYRIGDQLRSRALAGGS- 119

Query: 118 HLEVLELEYQPEAAG 132
            + V E+ +QPE +G
Sbjct: 120 KIRVEEILFQPERSG 134


>UniRef50_Q74EX3 Nucleoside diphosphate kinase regulator protein, putative n=1
           Tax=Geobacter sulfurreducens RepID=Q74EX3_GEOSL
          Length = 135

 Score =  151 bits (383), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 72/134 (53%), Gaps = 1/134 (0%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           M    I + + D  R++ +L+   +        L  EL  A +  P+++P +VVTMNSRV
Sbjct: 1   MDTRAIYVTEDDLSRLEEILDTIPFRDRKDLQKLEDELASAMIVDPKDVPPNVVTMNSRV 60

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
           K R+L   +    +LV+P     +  ++S+++P+G A+LG   GD++   +    A  + 
Sbjct: 61  KLRDLRADKEMTISLVFPNDANIAEGKISILSPIGTAILGFGAGDTLDLAVRS-FAKKIR 119

Query: 121 VLELEYQPEAAGDY 134
           + E+ YQP AAG +
Sbjct: 120 IEEVLYQPGAAGSH 133


>UniRef50_Q13WN5 GreA/GreB family elongation factor n=50 Tax=Burkholderia
           RepID=Q13WN5_BURXL
          Length = 136

 Score =  151 bits (383), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 44/135 (32%), Positives = 72/135 (53%), Gaps = 1/135 (0%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
              T  + +LD  R++     P      + D L+  L+RA +    E+P +VVTMNS+  
Sbjct: 3   KTKTCYLTELDVARLEKHAAAPGADA-RLQDMLDDVLERAVIVDSHEIPANVVTMNSQAT 61

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
             + + GE    T+VYP     ++ +L+V +P G ALLG + G+ I +  P G    L++
Sbjct: 62  LVDETSGEHMTWTVVYPPNADFAHGRLNVFSPAGLALLGAKRGERIRFTPPSGTEKVLKL 121

Query: 122 LELEYQPEAAGDYLL 136
            ++ +QPEAA D+ L
Sbjct: 122 EKILFQPEAADDFTL 136


>UniRef50_C0N448 Putative uncharacterized protein n=1 Tax=Methylophaga thiooxidans
           DMS010 RepID=C0N448_9GAMM
          Length = 137

 Score =  150 bits (379), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 41/135 (30%), Positives = 68/135 (50%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           + +P I +  LD  R++ L+        P+  +L  EL+RA++    ++P D+V+MNS V
Sbjct: 2   IHQPDIYVASLDLIRLEDLINTLWNKHSPVRLSLEDELERAKIIDSFQLPDDIVSMNSTV 61

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
           +            TLVYP  M    + LS+++P+G ALLG++ G+  +W    G      
Sbjct: 62  ELWVTKSDFPVYMTLVYPYGMKKDGSTLSILSPIGTALLGIKQGEEFYWPGRDGRNIKAR 121

Query: 121 VLELEYQPEAAGDYL 135
           +  + YQPE    Y 
Sbjct: 122 LENILYQPERERHYN 136


>UniRef50_C3X2V3 GreA/GreB family elongation factor n=2 Tax=Oxalobacter formigenes
           RepID=C3X2V3_OXAFO
          Length = 140

 Score =  149 bits (377), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 51/123 (41%), Positives = 73/123 (59%), Gaps = 1/123 (0%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKF 62
           RP I +   D ER++ +L    Y  +P    L  ELDRA +  PEE+P DV+T+NS  +F
Sbjct: 14  RPPITVTTHDYERLEQMLRNAKYRNIPGMADLQRELDRANVVEPEELPEDVITINSTARF 73

Query: 63  RNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVL 122
            +    +    TLVYP K     +++SV+APVG+ALLGL  G SI W++PG     L VL
Sbjct: 74  IDDCTNDQYEITLVYPDKADGV-SKISVLAPVGSALLGLSAGQSIPWQVPGRQKLQLRVL 132

Query: 123 ELE 125
           +++
Sbjct: 133 DVK 135


>UniRef50_A6X582 GreA/GreB family elongation factor n=3 Tax=Rhizobiales
           RepID=A6X582_OCHA4
          Length = 142

 Score =  149 bits (376), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 44/130 (33%), Positives = 75/130 (57%), Gaps = 1/130 (0%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
            +P I+++++D ER+  L    +     IA+ L  ELDRA++   + +P +V+ M S V+
Sbjct: 7   KKPNIVVSEIDYERLMGLATNVSERLEEIAEELMVELDRAKVVPAKRLPQNVIHMGSTVE 66

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           FR+ +DG+ R  TLVYP +   +  ++S++ P+G AL+GL  G SI W    G    L V
Sbjct: 67  FRS-NDGQERRVTLVYPGEADIAQGKISILTPIGTALIGLAPGQSISWTARDGKQHELNV 125

Query: 122 LELEYQPEAA 131
           L +  + + +
Sbjct: 126 LSVSNEAQVS 135


>UniRef50_C6X5Q8 Transcription elongation factor n=1 Tax=Flavobacteriaceae bacterium
           3519-10 RepID=C6X5Q8_FLAB3
          Length = 170

 Score =  146 bits (368), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 48/134 (35%), Positives = 74/134 (55%), Gaps = 4/134 (2%)

Query: 6   IIINDLDAERI-DILLEQPAYAGLPI--ADALNAELDRAQMCSPEEMPHDVVTMNSRVKF 62
           III   D+ RI   +++      +    A+ L  EL  A++    ++P DVVTMNS VK 
Sbjct: 38  IIITKQDSTRIHKSIMDAKKNNSIKAEDAERLLRELHSAKIVESADIPADVVTMNSVVKI 97

Query: 63  RNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVL 122
              ++  V    +VYP +    + ++S+ +PV AAL+G  V D I W +P G+   + + 
Sbjct: 98  HFENNKTVTEFKIVYPEQANIKDRKISIFSPVAAALIGYSVNDEIDWIVPSGMTKII-ID 156

Query: 123 ELEYQPEAAGDYLL 136
           E+ YQPEAAGD+ L
Sbjct: 157 EIIYQPEAAGDFDL 170


>UniRef50_B3PF63 Regulator of nucleoside diphosphate kinase n=1 Tax=Cellvibrio
           japonicus Ueda107 RepID=B3PF63_CELJU
          Length = 180

 Score =  145 bits (366), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 44/124 (35%), Positives = 78/124 (62%), Gaps = 3/124 (2%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
           +  +++I++ D +R+  L+E       P A+AL+ E+ RA + +  ++P DVV M+S V 
Sbjct: 57  TETSLVISNSDYQRLVQLIE---DNDSPAAEALDIEIGRATLVADAQLPADVVAMDSEVT 113

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           F +L  GE +   LV+PA+      ++S+++PVG+AL+GLR+G SI W +P G    L+V
Sbjct: 114 FEDLDSGEQKTIQLVFPAQANVDQLKISILSPVGSALIGLRIGSSIDWPVPQGKVRRLKV 173

Query: 122 LELE 125
           + ++
Sbjct: 174 IAVK 177


>UniRef50_A6GQE5 Nucleoside diphosphate kinase regulator n=1 Tax=Limnobacter sp.
           MED105 RepID=A6GQE5_9BURK
          Length = 122

 Score =  145 bits (366), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 48/128 (37%), Positives = 64/128 (50%), Gaps = 7/128 (5%)

Query: 8   INDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSD 67
           +N+LD  RI  L         P    LNA LD A+   P+++P DVVTMNS         
Sbjct: 1   MNELDLARISKL-------NAPFPPELNAALDNAEFIKPQDIPADVVTMNSLFTIVETES 53

Query: 68  GEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQ 127
           G      L YP+    +   +SV++PVGA+LLG + G    W  P G      V E+ +Q
Sbjct: 54  GSTNKLMLCYPSDAEPAKGYISVLSPVGASLLGRKAGTVAQWATPNGEQHFAVVKEILFQ 113

Query: 128 PEAAGDYL 135
           PEA+GDY 
Sbjct: 114 PEASGDYT 121


>UniRef50_B8IFL5 GreA/GreB family elongation factor n=8 Tax=Methylobacterium
           RepID=B8IFL5_METNO
          Length = 141

 Score =  143 bits (361), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 44/123 (35%), Positives = 65/123 (52%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKF 62
           +P I +   D ER+  L          +A  L  ELDRAQ+ +        V M  +V+F
Sbjct: 14  KPRIKMTVEDHERLSALAAAAQDRMPDVASCLADELDRAQIVAGRGRLPPFVRMGCQVEF 73

Query: 63  RNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVL 122
           R+ + G V++ TLVYP +      ++SV+ P+GAAL+GL  G SI WE   G+   L VL
Sbjct: 74  RDDTTGRVQIVTLVYPGEANIEQGKISVLTPIGAALIGLSTGQSITWETRSGLTKSLTVL 133

Query: 123 ELE 125
           ++ 
Sbjct: 134 DVR 136


>UniRef50_D1SYS0 GreA/GreB family elongation factor n=1 Tax=Acidovorax avenae subsp.
           avenae ATCC 19860 RepID=D1SYS0_9BURK
          Length = 139

 Score =  142 bits (358), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 51/139 (36%), Positives = 71/139 (51%), Gaps = 9/139 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           +  P  ++ DLD  R+  L  +          +L   L  A +     +  DVVTMNSRV
Sbjct: 5   LPHPERVLTDLDFARLSKLAARQLPPA-----SLADLLATADVTGSRAVDADVVTMNSRV 59

Query: 61  KFR----NLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVA 116
           +      + +DG  +V TL YP     +  ++SV++PVG +LLGLRVGD   W  P G  
Sbjct: 60  ELEGSGTDGADGARQVLTLCYPQDADAAAGRVSVLSPVGCSLLGLRVGDVAAWRTPQGED 119

Query: 117 THLEVLELEYQPEAAGDYL 135
               V  + +QPEAAGDYL
Sbjct: 120 CRATVAAILHQPEAAGDYL 138


>UniRef50_A1TUC9 GreA/GreB family elongation factor n=4 Tax=Burkholderiales
           RepID=A1TUC9_ACIAC
          Length = 136

 Score =  141 bits (356), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 49/129 (37%), Positives = 71/129 (55%), Gaps = 5/129 (3%)

Query: 7   IINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLS 66
           ++ DLD  R+  L  Q      P   +L   L+ A + S   +  DVVTM SRV+  + +
Sbjct: 12  VLTDLDFARLSRLASQQ-----PAPPSLADLLENADVTSSRTVEADVVTMYSRVELVDTA 66

Query: 67  DGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
            G  +V T+ YP     +   +SV++PVG++LLGLRVG +  W  P G A    V  +++
Sbjct: 67  TGARQVLTICYPRDADLAAGFVSVLSPVGSSLLGLRVGQTARWCTPRGEACEATVAGIQH 126

Query: 127 QPEAAGDYL 135
           QPEA GDYL
Sbjct: 127 QPEAEGDYL 135


>UniRef50_Q5P744 Transcription elongation factor n=3 Tax=Proteobacteria
           RepID=Q5P744_AZOSE
          Length = 158

 Score =  141 bits (356), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 47/127 (37%), Positives = 69/127 (54%), Gaps = 9/127 (7%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           M+   +I+ D D  R+  +              L AEL+RA +  P+ +P  VVTM+SRV
Sbjct: 34  MNSEHLILTDNDFVRLMAM---------QPGPQLRAELERAVVVPPDFLPRHVVTMHSRV 84

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
           ++ + + GE R   +VYP +   +  ++SV APVGAALLGL V   I W+ P G    L 
Sbjct: 85  RYLDEASGEQREIQVVYPEEADVAAGKVSVFAPVGAALLGLSVDQVIEWDFPRGPRRRLR 144

Query: 121 VLELEYQ 127
           V E+ +Q
Sbjct: 145 VEEVLHQ 151


>UniRef50_A5V983 GreA/GreB family elongation factor n=1 Tax=Sphingomonas wittichii
           RW1 RepID=A5V983_SPHWW
          Length = 166

 Score =  140 bits (353), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 43/129 (33%), Positives = 66/129 (51%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKF 62
           RP I + D +AE +  +          +++ L  E+DRA +     +P DVVTM+S V+F
Sbjct: 38  RPAIHMIDSEAETLANMAVAAEERIPQVSELLLEEIDRATLYKAARIPADVVTMHSHVEF 97

Query: 63  RNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVL 122
            + ++G  R   LVYP        ++S++  VGA L+GLR G SI W    G    L + 
Sbjct: 98  VDEANGTSRTVQLVYPKDADIDAGRVSILTLVGAGLIGLREGQSILWPGRDGHRRLLTIT 157

Query: 123 ELEYQPEAA 131
            +  + EAA
Sbjct: 158 RVSREAEAA 166


>UniRef50_A5VGM9 GreA/GreB family elongation factor n=1 Tax=Sphingomonas wittichii
           RW1 RepID=A5VGM9_SPHWW
          Length = 137

 Score =  139 bits (351), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 42/129 (32%), Positives = 67/129 (51%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKF 62
           RP I + D +A+ +  L    A     ++  L  EL RA +   + +P D+VTM+S V+F
Sbjct: 9   RPPIHMIDSEADILADLATSAATRLPQVSQLLLEELGRATIHKADRIPGDIVTMHSVVQF 68

Query: 63  RNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVL 122
            + + G+     LVYP     +  ++S++ PVGA L+GLR G SI W    G    L + 
Sbjct: 69  TDAASGKEHRYQLVYPKDADIAEGRISILTPVGAGLIGLRAGQSILWPDRDGHERLLTIA 128

Query: 123 ELEYQPEAA 131
           ++  +  AA
Sbjct: 129 KVSRESLAA 137


>UniRef50_A1U1V6 GreA/GreB family elongation factor n=2 Tax=Marinobacter
           RepID=A1U1V6_MARAV
          Length = 128

 Score =  138 bits (349), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 53/125 (42%), Positives = 75/125 (60%), Gaps = 1/125 (0%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFR 63
           P I +++ D  R+  LLE+ A     +AD L  EL RA M    +MP  VVTMNSRV+F 
Sbjct: 5   PHITVSEEDYNRLSTLLERVAGQSD-VADGLEDELSRADMKPLADMPEGVVTMNSRVRFL 63

Query: 64  NLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLE 123
           N   GE     LVYP ++ D++ ++S++AP GAA+LGL +G SI W + G    HL+V+ 
Sbjct: 64  NEDTGEEHEVALVYPHEVGDADHKVSILAPAGAAMLGLSIGSSIEWPMKGRKPIHLKVIG 123

Query: 124 LEYQP 128
           +   P
Sbjct: 124 VTRNP 128


>UniRef50_Q3SU57 GreA/GreB family elongation factor n=9 Tax=Bradyrhizobiaceae
           RepID=Q3SU57_NITWN
          Length = 151

 Score =  138 bits (347), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 43/136 (31%), Positives = 66/136 (48%), Gaps = 11/136 (8%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPE----------EMPHDV 53
           P I I+  D +R+  L E         A+ L  E+DRA++   +              ++
Sbjct: 11  PAIAISAHDIDRLRHLAEAAIEKYPATAEFLAREIDRAEIIPADGSLLDDTRDQRWKVNL 70

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           VTM S V F +   G+ R  TLVYP        ++S+++P+GAAL+GL  G SI ++ P 
Sbjct: 71  VTMQSEVTFIDDVSGQKRRVTLVYPEDADVDAGKISILSPIGAALIGLSAGQSIEFQTPS 130

Query: 114 GVATHLEVLELE-YQP 128
           G    L V+ +  Y P
Sbjct: 131 GGWRSLTVIAVWSYWP 146


>UniRef50_C6WYK0 GreA/GreB family elongation factor n=2 Tax=Methylophilaceae
           RepID=C6WYK0_METML
          Length = 125

 Score =  136 bits (342), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 42/124 (33%), Positives = 66/124 (53%), Gaps = 9/124 (7%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           M    +I++D D  R+ +L            + L  EL RA +   +++P DVV +NSRV
Sbjct: 2   MEIDKLILSDQDYARLSMLAND---------ELLGDELSRAIVVPADQVPADVVRINSRV 52

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
            + + S G  R   LV+P        ++SV++PVG+ALLGL+ G  I W  P G +  L+
Sbjct: 53  IYLDESSGLSREVELVFPEGADLKFGKISVLSPVGSALLGLKEGQVIDWPFPHGQSRRLK 112

Query: 121 VLEL 124
           V+ +
Sbjct: 113 VVSV 116


>UniRef50_B0T7C4 GreA/GreB family elongation factor n=1 Tax=Caulobacter sp. K31
           RepID=B0T7C4_CAUSK
          Length = 139

 Score =  135 bits (341), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 43/130 (33%), Positives = 70/130 (53%), Gaps = 1/130 (0%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           ++RP II+ + +A+R+  L  +   A    AD L  E++RA++ +  +MP  VV M S V
Sbjct: 8   VARPDIILAETEADRLSALATRLRDAAPQAADLLLEEIERAEIRADLDMPRTVVRMESVV 67

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
           +F + + G  R   LVYP     +  ++SV++ VGA L+GL    +I W    G    L 
Sbjct: 68  QFVDEAHGNPRTVLLVYPRDADIAAGKVSVLSFVGAGLIGLSPHQAIQWPDRNGRQRTLR 127

Query: 121 VLELEYQPEA 130
           +L++   PE 
Sbjct: 128 ILKVR-PPER 136


>UniRef50_A7IJH2 GreA/GreB family elongation factor n=4 Tax=Rhizobiales
           RepID=A7IJH2_XANP2
          Length = 143

 Score =  133 bits (336), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 45/126 (35%), Positives = 67/126 (53%), Gaps = 3/126 (2%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFR 63
           P ++++  D ER+  L          +A+ L AELDRA++     +P   V M S+V + 
Sbjct: 16  PALVLSHPDHERLAGLATAALDRIPDVAEELLAELDRARLVPIGRVPATAVQMGSKVTYE 75

Query: 64  NLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLE 123
             + G  R  TLVYP     +  ++SVM P+GAAL+GL  G SI W    G    L+V+E
Sbjct: 76  --AGGNARTVTLVYPEDADIAAARVSVMTPIGAALIGLSKGQSICWTARDGRRHELKVIE 133

Query: 124 LEYQPE 129
           ++  PE
Sbjct: 134 VQ-PPE 138


>UniRef50_A7HFE1 GreA/GreB family elongation factor n=1 Tax=Anaeromyxobacter sp.
           Fw109-5 RepID=A7HFE1_ANADF
          Length = 164

 Score =  133 bits (335), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 47/140 (33%), Positives = 73/140 (52%), Gaps = 8/140 (5%)

Query: 5   TIIINDLDAERIDILLEQPAYAGLPIADA--------LNAELDRAQMCSPEEMPHDVVTM 56
            +++ + DA R+   L + +   +  ADA        L   L  A +  P+ +P +VVTM
Sbjct: 25  RLLLTEQDAARLRATLARASLESMASADARGENAVELLATALRSAIVVPPDRIPAEVVTM 84

Query: 57  NSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVA 116
            SR+   +++ G  R   LVYP +       +SV++PVG ALLGL  G  + W LP G  
Sbjct: 85  RSRLVLEDVASGARREVVLVYPEEERTHEGHVSVLSPVGVALLGLSEGALVGWPLPSGRT 144

Query: 117 THLEVLELEYQPEAAGDYLL 136
             L+V  ++YQPEA  ++ L
Sbjct: 145 AVLQVESVQYQPEAVEEFHL 164


>UniRef50_A8LN19 GreA/GreB family elongation factor n=8 Tax=Alphaproteobacteria
           RepID=A8LN19_DINSH
          Length = 148

 Score =  132 bits (333), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 47/131 (35%), Positives = 66/131 (50%), Gaps = 2/131 (1%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKF 62
           RP I+IN  D   I+ L E        +AD L  E+ RA++    +MP +V+ +     F
Sbjct: 18  RPRIVINADDLSHIEALAEGAMDRNPALADRLLEEIARARIVPAAKMPLNVIGIGKSATF 77

Query: 63  RNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVL 122
           R+ + G+ R  TLVYP     S  ++SVM P+G ALLGL  G   HW   G     L V+
Sbjct: 78  RDETTGQERTVTLVYPEDADISRARVSVMTPIGVALLGLAEGAVFHWNTRGEERRMLTVI 137

Query: 123 ELEYQ--PEAA 131
            +     PE+A
Sbjct: 138 RVSDPAAPESA 148


>UniRef50_A9EFF1 GreA/GreB family elongation factor n=1 Tax=Oceanibulbus indolifex
           HEL-45 RepID=A9EFF1_9RHOB
          Length = 146

 Score =  131 bits (330), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 44/124 (35%), Positives = 71/124 (57%), Gaps = 1/124 (0%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKF 62
            P +I+N  D   ++ L E   +    +AD    E+ RAQ+   ++MP DVV + S+V +
Sbjct: 15  NPHLILNAADLVHLEELAEGMMHRHPTLADRFFEEIGRAQIVEDQQMPGDVVGIGSKVTY 74

Query: 63  RNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATH-LEV 121
           R+ + G+ +  TLVYP     + +Q+SV+ P+G ALLGLR G S +W+       H L +
Sbjct: 75  RDETTGQNKSVTLVYPEDADITRSQVSVITPIGVALLGLREGASFYWDTRRENQRHMLTI 134

Query: 122 LELE 125
           L++E
Sbjct: 135 LKVE 138


>UniRef50_Q98F06 Nucleoside diphosphate kinase regulator n=2 Tax=Mesorhizobium
           RepID=Q98F06_RHILO
          Length = 140

 Score =  130 bits (328), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 40/125 (32%), Positives = 60/125 (48%), Gaps = 3/125 (2%)

Query: 2   SRP--TIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSR 59
            RP   I+I+D D +R+  L           A+ L  E+DRA +     MP DVV M S 
Sbjct: 7   PRPSSRILISDTDHDRLTGLARALLDRAPETAEELLFEMDRAVVTDAAAMPADVVRMGSA 66

Query: 60  VKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHL 119
           V  R    G  +   LVYP +   +  ++SV+ P+G AL+G  +G ++ W   GG    +
Sbjct: 67  VTVR-GEGGATQRIMLVYPGEADIAENRISVLTPMGTALIGASIGQAVCWSSRGGRELSV 125

Query: 120 EVLEL 124
            V  +
Sbjct: 126 TVEAV 130


>UniRef50_A7HAZ2 GreA/GreB family elongation factor n=5 Tax=Myxococcaceae
           RepID=A7HAZ2_ANADF
          Length = 138

 Score =  130 bits (328), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 52/122 (42%), Positives = 71/122 (58%), Gaps = 3/122 (2%)

Query: 2   SRPTIIINDLDAERIDILLEQ-PAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           +R  I +   D +R+  L++Q  A      A+ L+AELDRA     E  P D+VTMN+RV
Sbjct: 3   ARKPIHVTHADLDRLRALVDQHLAGRDARAAEQLDAELDRA--VPIEVAPPDLVTMNARV 60

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
            F +L+ G  R   LVYP     +  ++SV+AP+GAALLGL VG+ I W LP G    L 
Sbjct: 61  AFVDLASGVRRELVLVYPRDADVAAGRVSVLAPIGAALLGLSVGEEIDWPLPDGRVARLR 120

Query: 121 VL 122
           +L
Sbjct: 121 IL 122


>UniRef50_Q0BZP7 Regulatory protein n=1 Tax=Hyphomonas neptunium ATCC 15444
           RepID=Q0BZP7_HYPNA
          Length = 128

 Score =  130 bits (327), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 45/124 (36%), Positives = 69/124 (55%), Gaps = 2/124 (1%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           ++RP I + D + ER+  L         P AD L  EL RA++ + E++P DVV M+ RV
Sbjct: 4   ITRPPIYVTDAELERLSDLA-HAVQGREPAADMLIEELSRARVTAVEDVPVDVVRMHDRV 62

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
            F           TLVYP +   ++ ++S++  VGA L+GL+VGD++ W    G    +E
Sbjct: 63  NFV-YDGARYEDFTLVYPYEANIADKRISILTQVGAMLIGLQVGDAMQWAGRDGRGHSME 121

Query: 121 VLEL 124
           VLE+
Sbjct: 122 VLEV 125


>UniRef50_B7L307 GreA/GreB family elongation factor n=1 Tax=Methylobacterium
           chloromethanicum CM4 RepID=B7L307_METC4
          Length = 147

 Score =  129 bits (326), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 48/131 (36%), Positives = 68/131 (51%), Gaps = 2/131 (1%)

Query: 3   RPTIIINDLDAERIDILLEQ--PAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           RP +II   D   +  +      + A   +   L  ELDRA +  P  +P  VVTM++RV
Sbjct: 10  RPPLIIPMSDFRFLREIAAGTGVSQARGSVVAWLAEELDRATVVPPGAVPPRVVTMHARV 69

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
           ++R+    +VR  TL YP +     + +SV+ PVGAAL+GL  G SI W  P G    L 
Sbjct: 70  EYRDDVTDQVRCVTLTYPGEEDAYASGISVLTPVGAALVGLSEGHSIRWRTPSGGLRGLT 129

Query: 121 VLELEYQPEAA 131
           VL + + P  A
Sbjct: 130 VLRVRFAPHHA 140


>UniRef50_B0T793 GreA/GreB family elongation factor n=1 Tax=Caulobacter sp. K31
           RepID=B0T793_CAUSK
          Length = 141

 Score =  129 bits (326), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 38/123 (30%), Positives = 66/123 (53%), Gaps = 1/123 (0%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
           ++PTI + + D E +  L + PA         L  E+ RA +  P + P   V + SR+ 
Sbjct: 18  AQPTIYVTEQDFEILSNLADAPAGRAF-GGRVLAHEMARALIVEPGQAPLPFVRIGSRID 76

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           +R+LS+G+ R   L  P   +  + ++SV++PVGAAL+G+  G + HW    G    ++V
Sbjct: 77  YRDLSNGQTRSVRLSLPRDASIDDNRISVLSPVGAALVGMTAGQAFHWTDAEGRPRGVQV 136

Query: 122 LEL 124
           + +
Sbjct: 137 IAV 139


>UniRef50_C6VSR5 GreA/GreB family elongation factor n=2 Tax=Sphingobacteriales
           RepID=C6VSR5_DYAFD
          Length = 134

 Score =  127 bits (320), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 31/125 (24%), Positives = 63/125 (50%), Gaps = 1/125 (0%)

Query: 5   TIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRN 64
            +I+   D + +    +           +L  EL+RA +    E+P   + +NS VK R 
Sbjct: 7   PVILGKDDFKLLKQFAQTFPDNNSSETMSLAYELNRAVVVEDNELPAGSIRLNSYVKVRE 66

Query: 65  LSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
            +  +    ++V P     +  ++S++ P+GAAL+GL  G+++ W++P G+    ++L++
Sbjct: 67  TTTNKEMAFSIVMPKDADIAKQRISILTPMGAALIGLCKGETVEWKMPAGI-RRFKILDV 125

Query: 125 EYQPE 129
            Y  E
Sbjct: 126 WYDQE 130


>UniRef50_A4BB58 Nucleoside diphosphate kinase regulator n=1 Tax=Reinekea blandensis
           MED297 RepID=A4BB58_9GAMM
          Length = 142

 Score =  126 bits (316), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 49/128 (38%), Positives = 75/128 (58%), Gaps = 3/128 (2%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
            +P + I++ D +R+  L+    Y      D L +ELDRA +C P E+P D V + S V+
Sbjct: 4   PKPDVFISEHDWQRLQRLVAH--YPDHEAIDWLESELDRATVCLPNELPADAVQLGSVVR 61

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           F+  S G+V +R LV P +    +  +SV++PVG ALLGLRVGD I W    G +T + +
Sbjct: 62  FQLSSSGQVYLRELVLPEQ-RQHDEHISVLSPVGMALLGLRVGDEIAWPSSPGQSTTVRI 120

Query: 122 LELEYQPE 129
           L+++   E
Sbjct: 121 LDVKQDRE 128


>UniRef50_Q2GA51 GreA/GreB family elongation factor n=1 Tax=Novosphingobium
           aromaticivorans DSM 12444 RepID=Q2GA51_NOVAD
          Length = 159

 Score =  125 bits (314), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 44/122 (36%), Positives = 69/122 (56%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKF 62
           RP II+ D +A+ +  L    +     I+  L  E+ RAQ+   +++P D V M S V+F
Sbjct: 30  RPQIILIDSEADALADLALAASDRLPEISRMLMEEIGRAQIVPAQDLPPDAVAMRSVVRF 89

Query: 63  RNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVL 122
           R+ + G VR  TLVYPA+   +  ++S++ PVGA L+GLR G SI W    G    + + 
Sbjct: 90  RDEATGAVRTVTLVYPAEADIAQDRVSILTPVGAGLIGLRAGQSIDWPNVRGKQRAITIE 149

Query: 123 EL 124
           ++
Sbjct: 150 QV 151


>UniRef50_Q5QX12 Transcription elongation factor family protein n=1 Tax=Idiomarina
           loihiensis RepID=Q5QX12_IDILO
          Length = 129

 Score =  124 bits (312), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 44/123 (35%), Positives = 69/123 (56%), Gaps = 2/123 (1%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
           +RP I+I+ +D   I+  L++         D L  EL RA++  P  MP +V  +N +V 
Sbjct: 7   TRPNIVISCVDMAVIEHHLDETRLPR-EFLDELEVELARAKIVEPNVMPANVACLNRQVT 65

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           F+ L  G+V  +TL  P ++   +  LSV AP+GAAL+GL VG SI W+   G    +E+
Sbjct: 66  FKVLETGKVFTKTLTAPDQVDKYDDSLSVFAPLGAALIGLSVGQSIQWKTNRG-LQSVEI 124

Query: 122 LEL 124
           + +
Sbjct: 125 VHV 127


>UniRef50_B4RF21 Transcription elongation factor n=2 Tax=cellular organisms
           RepID=B4RF21_PHEZH
          Length = 214

 Score =  123 bits (310), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 42/124 (33%), Positives = 61/124 (49%), Gaps = 4/124 (3%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFR 63
           PT+ + + D +R+  L +       P A+ L  ELDRA +    E     V + S V++R
Sbjct: 95  PTVRVAEADYDRLLNLADH----DGPGAELLARELDRAIVVREGEKSRPFVRLGSTVEYR 150

Query: 64  NLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLE 123
           +    +VR   LV P        +LSV++PVGAALLGL VGD+  W  P G    + V  
Sbjct: 151 DRLTEKVRTVELVPPDAADIDANRLSVLSPVGAALLGLSVGDTFSWTAPDGRPRVVTVEA 210

Query: 124 LEYQ 127
           +   
Sbjct: 211 VRRD 214


>UniRef50_Q15Z69 GreA/GreB family elongation factor n=1 Tax=Pseudoalteromonas
           atlantica T6c RepID=Q15Z69_PSEA6
          Length = 128

 Score =  123 bits (309), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 39/124 (31%), Positives = 66/124 (53%), Gaps = 2/124 (1%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
            +P III+  D   ++  LE+       I  A+  ELDRA + + +++P +VV + S+V 
Sbjct: 3   KQPDIIISTADLAELEYQLERSKLPDDAI-RAIENELDRATIVACKDLPENVVAIGSQVT 61

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           F+ L   +V  + L  P         +SV AP+G+AL+GL  G  I W+   G    +E+
Sbjct: 62  FKILDSQKVFTKALCLPHDSVKFEDSISVFAPIGSALIGLSTGQCIKWQTQRG-QQSVEI 120

Query: 122 LELE 125
           +++E
Sbjct: 121 IKVE 124


>UniRef50_C6XWY5 Transcription elongation factor GreA/GreB domain protein n=1
           Tax=Pedobacter heparinus DSM 2366 RepID=C6XWY5_PEDHD
          Length = 125

 Score =  122 bits (307), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 40/124 (32%), Positives = 66/124 (53%), Gaps = 2/124 (1%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           M   ++ ++  D + +   LE+   +     + L AEL  A + + EE+P DVV + S  
Sbjct: 1   METKSLSLSKSDFKLLKEHLEKSNMSAYNK-EKLQAELKAATIYTEEELPSDVVCLKSEA 59

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
           +  N+  G+     LV P +      ++SV AP+G AL G R GDSI+WE+P G+    +
Sbjct: 60  RIANVKTGKEFTFKLVMPEEANIKAQKVSVFAPIGIALFGYRTGDSINWEMPDGI-QEFK 118

Query: 121 VLEL 124
           +LE+
Sbjct: 119 ILEV 122


>UniRef50_Q98F07 Nucleoside diphosphate kinase regulator; Rnk n=2 Tax=Mesorhizobium
           RepID=Q98F07_RHILO
          Length = 180

 Score =  122 bits (306), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 38/132 (28%), Positives = 60/132 (45%), Gaps = 1/132 (0%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           M      +   D   ++++LE+      PI   L  +L  A +   + +  D+VT+NSRV
Sbjct: 1   MKSTNCCLTTKDRAVLEVMLERRRAFADPIVHVLEHKLSSADVVPIDTVGPDIVTLNSRV 60

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
            F ++  G  + RTLV         + LSV    G  +LG+  G +   E   G    + 
Sbjct: 61  VF-SIDAGHAQTRTLVQNEVRGPVGSSLSVATRRGLCMLGMAQGQTASIEHADGRRESIL 119

Query: 121 VLELEYQPEAAG 132
           +  + YQPEAAG
Sbjct: 120 IKAVLYQPEAAG 131


>UniRef50_C0A6F4 GreA/GreB family elongation factor n=1 Tax=Opitutaceae bacterium
           TAV2 RepID=C0A6F4_9BACT
          Length = 148

 Score =  121 bits (304), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 42/131 (32%), Positives = 66/131 (50%), Gaps = 8/131 (6%)

Query: 3   RPTIIINDLDA----ERIDILLEQPAYAGLPIADALNAELDRAQMCSPEE-MPHDVVTMN 57
           +  I I+  D      R++++ E            L AE DRA +   +  MP  VVT++
Sbjct: 4   QQPIYISRADLLQIRARLNLIAEGRHDR--ENLARLRAEFDRALIIEDDTAMPDGVVTLH 61

Query: 58  SRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVAT 117
             V+ ++L   E+   TL  P        ++S++AP+G ALLG +V + + WE+PGG A 
Sbjct: 62  CEVRLQDLDTNEIETYTLTLPEHADPEAHRISILAPIGTALLGYQVDNVVTWEMPGG-AR 120

Query: 118 HLEVLELEYQP 128
            L +LE   QP
Sbjct: 121 RLRILEARRQP 131


>UniRef50_B4W8F1 Putative uncharacterized protein n=1 Tax=Brevundimonas sp. BAL3
           RepID=B4W8F1_9CAUL
          Length = 141

 Score =  119 bits (298), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 37/131 (28%), Positives = 62/131 (47%), Gaps = 3/131 (2%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
           SRP I ++  D + +  L+      G  +A  L  EL+RA +C P + P     ++  + 
Sbjct: 12  SRPDIFLSARDHQTLSRLVGDMPAEG--VAGLLQEELERAVICEPGDRPRGAAPLHRWLH 69

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           + +    + R   +V P +      ++SV++ VGA L+GL  G +I W  P G    L  
Sbjct: 70  YVDGRSPQPRRIQIVLPNEADIDAGKVSVLSYVGAGLIGLVEGHTIAWTDPSGADRRLTP 129

Query: 122 LELEYQPEAAG 132
           + +E  PE  G
Sbjct: 130 VMIE-DPETPG 139


>UniRef50_Q930S2 Putative uncharacterized protein n=1 Tax=Sinorhizobium meliloti
           RepID=Q930S2_RHIME
          Length = 140

 Score =  119 bits (298), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 40/119 (33%), Positives = 58/119 (48%), Gaps = 1/119 (0%)

Query: 7   IINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLS 66
            I   D   +  L  Q       IA  L  +L+R  +   +++P DVV + S V    + 
Sbjct: 14  FIGATDYRLLSRLAYQALSRDFDIAAELIEKLERPCVLPDDQVPPDVVKIGSIVTCE-VE 72

Query: 67  DGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
           DG  R  +LVYP  +     ++SV+ PVG ALLGLR G ++ W    G   HL V+ +E
Sbjct: 73  DGPCRTFSLVYPDDVDAEKGRISVLTPVGVALLGLRPGQAVEWFSRDGQRNHLIVVRVE 131


>UniRef50_B1ZU20 GreA/GreB family elongation factor n=1 Tax=Opitutus terrae PB90-1
           RepID=B1ZU20_OPITP
          Length = 143

 Score =  118 bits (297), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 35/131 (26%), Positives = 59/131 (45%), Gaps = 3/131 (2%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           M+   +  +  D  ++ +L    +  G P    L +EL R  +     +P   + + S V
Sbjct: 1   MNTSPLYFSIEDYTKLSLLATATSRPGTP--SQLRSELSRGVVVDATALPPTAIRLGSTV 58

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
           +  +L  GE+   TLV P +      +LSV+AP+G A++G   G  + W  PGG    L 
Sbjct: 59  EIEDLESGEIETYTLVLPEQANVDARKLSVLAPIGTAVIGCLQGAEVAWSTPGGT-RRLR 117

Query: 121 VLELEYQPEAA 131
           +  +    E A
Sbjct: 118 IGRVSPPAEPA 128


>UniRef50_A6EIL5 Nucleoside diphosphate kinase regulator protein, putative n=1
           Tax=Pedobacter sp. BAL39 RepID=A6EIL5_9SPHI
          Length = 129

 Score =  117 bits (294), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 35/119 (29%), Positives = 63/119 (52%), Gaps = 3/119 (2%)

Query: 6   IIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNL 65
           ++I   D + +     +       +  +L+AEL RA + S EE P D + +NS V+ ++ 
Sbjct: 9   VVITADDYQLLKPYFTKTNPHAGEM--SLSAELSRAVILSNEEFPSDAIRLNSTVRIQDE 66

Query: 66  SDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
           S GE+    +V P        ++SV+ P+ AAL+G R GD++ W++P G   +  + E+
Sbjct: 67  STGEIMELIIVLPQHANIKEKKISVLTPIAAALIGFRQGDAVQWKVPAG-LKNFRITEV 124


>UniRef50_A3PS97 GreA/GreB family elongation factor n=4 Tax=Rhodobacter sphaeroides
           RepID=A3PS97_RHOS1
          Length = 137

 Score =  117 bits (294), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 41/127 (32%), Positives = 61/127 (48%), Gaps = 2/127 (1%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
           SRP I +  +  ER+D L          +A  L  +L  A++ +P  +  DVVT+ S V 
Sbjct: 8   SRPAIDMTLI--ERLDTLAGAAIARLPDVAYPLITKLTSARLLAPARLSSDVVTIGSEVL 65

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           + +      R  TL +P     S   +S++ PVG ALLGL  GD   W+   G    L V
Sbjct: 66  YHDDQGARDRRVTLSWPEDADISRRSVSILTPVGVALLGLSAGDRFQWQTRAGERRSLTV 125

Query: 122 LELEYQP 128
           L++  +P
Sbjct: 126 LQVGSEP 132


>UniRef50_A4CMB9 Nucleoside diphosphate kinase regulator n=1 Tax=Robiginitalea
           biformata HTCC2501 RepID=A4CMB9_9FLAO
          Length = 139

 Score =  114 bits (287), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 6/132 (4%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIA----DALNAELDRAQMCSPEEMPHDVVTM 56
           M    ++I   +   +   +   A+            L  ELD A++    EM +DVV  
Sbjct: 1   MKYKQLLIEKKEYVLLKRYVNLSAHYHDATLWQSIQKLLTELDSAKIVDEAEMQNDVVRF 60

Query: 57  NSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVA 116
           +S +   +  +G  R   LV P +   S  ++S++ P+G AL G   GD++ WE P G  
Sbjct: 61  HSIITVTS-ENGWSRRVQLVLPPERDVSKDKISILTPMGIALFGYAEGDTVSWEFPSG-P 118

Query: 117 THLEVLELEYQP 128
             L + ++E +P
Sbjct: 119 KRLRIEKVEQEP 130


>UniRef50_C7CFG6 Putative regulator n=1 Tax=Methylobacterium extorquens DM4
           RepID=C7CFG6_METED
          Length = 149

 Score =  113 bits (284), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 42/122 (34%), Positives = 61/122 (50%), Gaps = 1/122 (0%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFR 63
           P I +   D +R+          G   AD L  EL RA +C P  +P +VV++N RV +R
Sbjct: 8   PPITVTTRDFDRLVAFSLDAHLRGDSHADFLLWELKRATLCPPCALPSEVVSVNCRVLYR 67

Query: 64  NLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG-GVATHLEVL 122
              +  VRV  L +P  + +    LSV +P+G ALLGLRVGD + +     G    + V 
Sbjct: 68  LDDEPGVRVHLLAHPDDLINLADGLSVASPLGTALLGLRVGDRMPFCDNRLGTQHVVTVE 127

Query: 123 EL 124
            +
Sbjct: 128 GI 129


>UniRef50_A7HXN2 GreA/GreB family elongation factor n=1 Tax=Parvibaculum
           lavamentivorans DS-1 RepID=A7HXN2_PARL1
          Length = 133

 Score =  113 bits (284), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 42/122 (34%), Positives = 66/122 (54%), Gaps = 1/122 (0%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFR 63
           P I++ +   + +  + E        +A  L+ EL+RA++     +P DVV +NS V+F 
Sbjct: 10  PQIVVAEEQFDALSDIAEGLTGVLPHVAGFLDRELNRARLLPLAHVPSDVVKVNSTVEFT 69

Query: 64  NLSDGE-VRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVL 122
             + GE V    L +PA+ T  +  +S+ +PVG ALLGLR G SI W    G    L+VL
Sbjct: 70  LDTRGERVERLKLAFPAESTAGDGYVSIASPVGVALLGLREGQSIEWTSRYGERRSLKVL 129

Query: 123 EL 124
           ++
Sbjct: 130 KV 131


>UniRef50_A5FHU8 GreA/GreB family elongation factor n=1 Tax=Flavobacterium
           johnsoniae UW101 RepID=A5FHU8_FLAJ1
          Length = 132

 Score =  113 bits (283), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 31/121 (25%), Positives = 62/121 (51%), Gaps = 2/121 (1%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFR 63
           PT   +D    R +++L+         A+ L+ ELDRA +    E+   V+ +NS V   
Sbjct: 5   PTFCKSDYQFLR-ELILKSKNSTNTKEANQLSQELDRAVISKESELDSSVIRINSLVTIE 63

Query: 64  NLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLE 123
           ++   +     +V P+      +++S++AP+  A++G +  D + WELP G+   L+++ 
Sbjct: 64  DVKANKQMKIQIVLPSYADVKQSKISILAPLSVAIIGFKENDEVDWELPAGI-KTLKIVA 122

Query: 124 L 124
           +
Sbjct: 123 V 123


>UniRef50_B8IHN9 GreA/GreB family elongation factor n=1 Tax=Methylobacterium
           nodulans ORS 2060 RepID=B8IHN9_METNO
          Length = 147

 Score =  112 bits (281), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 38/124 (30%), Positives = 64/124 (51%), Gaps = 1/124 (0%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
           S P I I++ D +R+ +        G      L +EL+RA +C   E+P  VV+ N RV 
Sbjct: 6   SLPPITISNYDFDRLVVYGLTAYMHGDRNVVFLFSELERATVCPAMELPDQVVSANCRVI 65

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHW-ELPGGVATHLE 120
           +R   +  +R   LV+P  +   + ++S  +P+G ALLGL+VGD + + +   G    + 
Sbjct: 66  YRIDDEPCLRAHMLVHPCDLISPDDEISAGSPLGIALLGLKVGDRMPFCDTQTGGRHVVA 125

Query: 121 VLEL 124
           V  +
Sbjct: 126 VEGV 129


>UniRef50_Q11G80 GreA/GreB family elongation factor n=1 Tax=Chelativorans sp. BNC1
           RepID=Q11G80_MESSB
          Length = 176

 Score =  107 bits (268), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 35/129 (27%), Positives = 54/129 (41%), Gaps = 1/129 (0%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKF 62
           +    +   D E +  + E+       +   L  +L+ A++  PE  P DVVT+NSR+ F
Sbjct: 4   KRGCTLTTRDFETLQQMFEEHRDRNEAMTMLLRHKLETARVTRPEVTPDDVVTLNSRISF 63

Query: 63  RNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVL 122
           R + +G    R +            L +    G ALLGL  G          +   L+V 
Sbjct: 64  R-VGNGMPETRIICRDRSRGPLGYFLPITTIRGLALLGLTEGQMTPVSRGRSLVEILQVT 122

Query: 123 ELEYQPEAA 131
            + YQPE A
Sbjct: 123 AIHYQPERA 131


>UniRef50_C0QKN0 Transcription elongation factor n=1 Tax=Desulfobacterium
           autotrophicum HRM2 RepID=C0QKN0_DESAH
          Length = 175

 Score =  107 bits (268), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 1/93 (1%)

Query: 33  ALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMA 92
            L  ++  A++  P  +  D V   SRV   NL  GE     +V   +      ++SV +
Sbjct: 84  ELGYKIASAKIIDPATVSKDCVRFASRVVIENLDSGEEVEYMIVGQEESDIHKGKISVSS 143

Query: 93  PVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
           P+G ALLG + GD I  + PGG   + E++++ 
Sbjct: 144 PLGMALLGKQPGDEIVIQAPGG-KRNYEIVDIL 175


>UniRef50_A6EMP4 Transcription elongation factor n=4 Tax=Bacteroidetes
           RepID=A6EMP4_9BACT
          Length = 139

 Score =  106 bits (266), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 34/128 (26%), Positives = 58/128 (45%), Gaps = 6/128 (4%)

Query: 1   MSRPTIIINDLDAERIDILLE----QPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTM 56
           M   ++II   +   +  +L        +        LN EL  A +   EEMP DV+  
Sbjct: 1   MKYGSVIIEKKEYVFLKRILNISGYAADFEIQKSFKRLNEELKTAIIVDEEEMPTDVIRF 60

Query: 57  NSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVA 116
           NS+V   +  +G  +   +V PA       ++S++  +GAAL G   GD++ WE P G  
Sbjct: 61  NSQVLI-STKNGWKKEFQIVSPALKDVKADKISILTVMGAALFGYAQGDTVEWEFPTGKN 119

Query: 117 THLEVLEL 124
             + + ++
Sbjct: 120 L-ITIEKV 126


>UniRef50_B4RBL2 Transcription elongation factor n=1 Tax=Phenylobacterium zucineum
           HLK1 RepID=B4RBL2_PHEZH
          Length = 143

 Score =  105 bits (263), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 39/124 (31%), Positives = 56/124 (45%), Gaps = 2/124 (1%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
           S P + + D +   +  ++        P    L  EL RA +      P DVV + S V+
Sbjct: 9   SNPRVTVLDEEYAPLADIVCGSP-RATPGLALLWNELSRATLVQAGRAPADVVRLGSAVE 67

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           + +L+  E R   LV P +      +  V   +GAALLGLR GD  HW  P G    L+V
Sbjct: 68  YTDLTRRESRRIRLVLPREARPPALE-PVSGTIGAALLGLRPGDVFHWRAPSGELRSLQV 126

Query: 122 LELE 125
             +E
Sbjct: 127 DAVE 130


>UniRef50_A0LZA7 Transcription elongation factor n=1 Tax=Gramella forsetii KT0803
           RepID=A0LZA7_GRAFK
          Length = 146

 Score =  105 bits (262), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 37/129 (28%), Positives = 61/129 (47%), Gaps = 6/129 (4%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGL----PIADALNAELDRAQMCSPEEMPHDVVTM 56
           M    +II   + + +  ++    Y            LN EL  A++ +  EMP DV+ +
Sbjct: 1   MRYGELIIEKKEYDFLKQIMSLAKYHKDTSYKASIYKLNEELKDARILTNSEMPLDVIRL 60

Query: 57  NSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVA 116
           NS V        E R   +V P K      ++SV+AP+G AL G   GD+I W  P G +
Sbjct: 61  NSLVTIETPYAVE-RTYQIVTPEKGDIRKNKISVLAPMGLALFGYAQGDNITWTFPLGES 119

Query: 117 THLEVLELE 125
            ++++ E++
Sbjct: 120 -YIKIKEVK 127


>UniRef50_B1ZD84 GreA/GreB family elongation factor n=4 Tax=Methylobacterium
           RepID=B1ZD84_METPB
          Length = 149

 Score =  104 bits (261), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 39/124 (31%), Positives = 61/124 (49%), Gaps = 1/124 (0%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
            RP I +   D +R+          G P AD L ++L+RA   +    P DVV +  RV+
Sbjct: 6   KRPPITLPTYDFDRLVASGLAAYQRGDPYADLLLSKLERAASFAASPPPRDVVAVTCRVR 65

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWEL-PGGVATHLE 120
           +R   +  VR   LVYP  +  S  ++S  + +G A+LGLR GD I +     G    +E
Sbjct: 66  YRLDDEPTVRAHRLVYPGHVIASEEEISAASALGVAMLGLRRGDRIPFRDNATGSEHVVE 125

Query: 121 VLEL 124
           + ++
Sbjct: 126 IADV 129


>UniRef50_A6LPL4 Transcription elongation factor greA n=30 Tax=Clostridia
           RepID=GREA_CLOB8
          Length = 160

 Score =  104 bits (260), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 1/92 (1%)

Query: 33  ALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMA 92
            L   L  A +    E+P D+V++ S+VK ++    E    ++V  A+    N ++S  +
Sbjct: 67  QLENMLKNAVVVDESEIPSDIVSVGSKVKVKDYEFDEEVEYSIVGSAEADPMNFKISNES 126

Query: 93  PVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
           PVG AL+G +VGD +   +P GV    E+L +
Sbjct: 127 PVGNALVGKKVGDVVEVTVPDGVN-KFEILGI 157


>UniRef50_UPI00016C498C transcription elongation factor greA n=1 Tax=Gemmata obscuriglobus
           UQM 2246 RepID=UPI00016C498C
          Length = 161

 Score =  104 bits (260), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 25/93 (26%), Positives = 46/93 (49%), Gaps = 1/93 (1%)

Query: 32  DALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVM 91
           DAL+  L RA +     +P D V   S+V+  ++   E     LV P +      ++   
Sbjct: 65  DALSDRLSRAVIVDTSNLPKDTVAFGSKVRVLDVDVDEEETFELVSPGQENPDKGRILTG 124

Query: 92  APVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
           +P+G  L+G + GD++  ++P G     ++LE+
Sbjct: 125 SPIGQGLIGRKKGDTVEIQVPSGT-IKFKILEI 156


>UniRef50_P64276 Transcription elongation factor greA n=48 Tax=delta/epsilon
           subdivisions RepID=GREA_HELPJ
          Length = 164

 Score =  104 bits (259), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 32/136 (23%), Positives = 63/136 (46%), Gaps = 11/136 (8%)

Query: 1   MSRPTIIINDLDAER----IDILLE-QPAYAGLPIADA----LNAELDRAQMCSPEEMPH 51
           + RP I + ++D  R    +    E   A       +A    L+  +  AQ+  P  + H
Sbjct: 24  VERPNI-VKEIDIARGHGDLKENAEYHAAKEKQRFIEARIVDLSEIVANAQVIDPSALAH 82

Query: 52  DVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWEL 111
           + V+  S +K  NL + +    T+V   +   +   +S  +P+  +L+G   GD++  +L
Sbjct: 83  NKVSFGSTIKILNLDNDKEFSYTIVGSVESDPAKGLISFGSPIAKSLIGKSKGDAVSIQL 142

Query: 112 PGGVATHLEVLELEYQ 127
           P G +   E+L++ Y+
Sbjct: 143 PNGES-DFEILDIYYK 157


>UniRef50_Q4HT85 Transcription elongation factor n=1 Tax=Campylobacter upsaliensis
           RM3195 RepID=Q4HT85_CAMUP
          Length = 161

 Score =  104 bits (259), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 36/135 (26%), Positives = 56/135 (41%), Gaps = 11/135 (8%)

Query: 3   RPTIIINDLDAERID-ILLEQPAYAGLPIADALNAE--------LDRAQMCSPEEMPHDV 53
           RP +++ ++D  R    L E   Y       AL           L RAQ+  P    H+ 
Sbjct: 26  RPAVVV-EIDVARSHGDLKENAEYHAAREKQALIESRIAELGGILSRAQVIDPASYEHES 84

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           V   S V   +L   +    TLV   +       +S+ +P+  A+LG + GD     LP 
Sbjct: 85  VKFGSSVLIMDLESEKESKYTLVGTCESDLEKGYISIASPLARAMLGKKEGDEFKVRLPK 144

Query: 114 GVATHLEVLELEYQP 128
           G +   E+L + Y+P
Sbjct: 145 GES-EFEILSVTYEP 158


>UniRef50_D0J9T5 Transcription elongation factor n=55 Tax=Bacteria
           RepID=D0J9T5_BLASP
          Length = 162

 Score =  103 bits (256), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 33/134 (24%), Positives = 61/134 (45%), Gaps = 8/134 (5%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADA--------LNAELDRAQMCSPEEMPHD 52
           + RP I +   +A     L E   Y  +  A          L  +L  A++    ++   
Sbjct: 27  IERPKISMQIAEARDKGDLSENAEYDAIKEAQEFLEMNIAKLKKKLSNARIIDGSQINRT 86

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V++ S V+ +NL+ G  ++ TLV   +    + ++S+  P+   LLG +VG   H +LP
Sbjct: 87  RVSILSTVRVKNLTYGGEQIYTLVPEGEADLKSGKISINTPISTGLLGKQVGQIAHIKLP 146

Query: 113 GGVATHLEVLELEY 126
             +    E+LE+ +
Sbjct: 147 NKMILDYEILEIAF 160


>UniRef50_A5FRA2 Transcription elongation factor n=3 Tax=Dehalococcoides
           RepID=A5FRA2_DEHSB
          Length = 266

 Score =  102 bits (255), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 26/95 (27%), Positives = 49/95 (51%), Gaps = 1/95 (1%)

Query: 33  ALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMA 92
            +  EL  A++    +     V M + VK R+L +GE  + TLV P ++     ++S  +
Sbjct: 173 EIEHELKHAEVSEYTDNNTSKVNMGNTVKLRDLKNGEQCIYTLVSPKEIEPLKGRISASS 232

Query: 93  PVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQ 127
           P+G AL     GD+I  E+P G   ++ + ++ ++
Sbjct: 233 PIGKALFNRSKGDNIEIEVPSGTLQYV-IEDISFK 266


>UniRef50_Q13CU9 Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris
           BisB5 RepID=Q13CU9_RHOPS
          Length = 156

 Score =  102 bits (255), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 42/127 (33%), Positives = 60/127 (47%), Gaps = 2/127 (1%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKF 62
            P + I   D  R+  +  Q   +  P+   L +EL+RA +      P   V ++  V F
Sbjct: 2   NPPVSIASRDFGRLRQIAVQALASRDPVGRFLFSELERAVVID-SPAPPLTVRLDDWVTF 60

Query: 63  RNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVL 122
           R   D  +  R LV P     +   LSV++PVGAAL+GLR G  +H++   GV     V 
Sbjct: 61  RADDDQPLESRILVLPGHYRRNALHLSVLSPVGAALVGLRPGARMHYQGVDGVQHVATVE 120

Query: 123 ELEYQPE 129
            LE  PE
Sbjct: 121 SLE-PPE 126


>UniRef50_D2R891 Transcription elongation factor GreA n=1 Tax=Pirellula staleyi DSM
           6068 RepID=D2R891_9PLAN
          Length = 164

 Score =  102 bits (254), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 11/133 (8%)

Query: 4   PTIIINDLDAERID-ILLEQPAYAGLPIADAL--------NAELDRAQMCSPEEMPHDVV 54
           P I     D  R +  L E   Y     A  L          +L +A +  P  MP D V
Sbjct: 28  PDITQKIAD-ARAEGDLKENAEYHAQREAQGLLQAKINLIRNKLSKASIIDPSTMPRDQV 86

Query: 55  TMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGG 114
           +  + V  +++   E    TLV   +   +  ++ + +P+G AL+G ++GD +    P G
Sbjct: 87  SFGTTVLVKDIDMDEEEEFTLVGAGEEDYNAGRILITSPLGQALVGKKIGDVVDVPAPKG 146

Query: 115 VATHLEVLELEYQ 127
               LE+L L++ 
Sbjct: 147 SYQ-LEILTLKFD 158


>UniRef50_Q97EB6 Transcription elongation factor greA n=6 Tax=Clostridiales
           RepID=GREA_CLOAB
          Length = 158

 Score =  101 bits (252), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 26/93 (27%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 33  ALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMA 92
            +   L  A +    E+ +DVV++ S+V  ++    E    ++V  A+      ++S  +
Sbjct: 67  QIENMLKNANVIDESELKNDVVSVGSKVMVKDYQFDEEIEFSIVGSAEADPIENKISNES 126

Query: 93  PVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
           PVG+AL+G +VGD I   +P GV  + ++L ++
Sbjct: 127 PVGSALIGKKVGDEIEVNVPDGVDKY-KILAIK 158


>UniRef50_A5FHJ3 GreA/GreB family elongation factor n=3 Tax=Flavobacteriaceae
           RepID=A5FHJ3_FLAJ1
          Length = 143

 Score =  100 bits (249), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 35/125 (28%), Positives = 64/125 (51%), Gaps = 2/125 (1%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           MS+  II+     + I   + +         + L +EL  A     + +P DVV++N +V
Sbjct: 18  MSQNNIILTTGTYDLIKDHVRRKKVT-PQEEELLLSELKHATQVLRKNLPEDVVSVNRKV 76

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
            +++ +  + +   LV P K+  S  ++SV++  G A++G +VGD I W    G    LE
Sbjct: 77  TYKDHNTNQEKTILLVGPEKVKVSKNKISVLSDEGIAMVGYKVGDLIEWPAKKGH-LKLE 135

Query: 121 VLELE 125
           +L++E
Sbjct: 136 ILKVE 140


>UniRef50_A7HXN3 GreA/GreB family elongation factor n=1 Tax=Parvibaculum
           lavamentivorans DS-1 RepID=A7HXN3_PARL1
          Length = 171

 Score = 99.2 bits (246), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 35/125 (28%), Positives = 61/125 (48%), Gaps = 1/125 (0%)

Query: 7   IINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLS 66
           ++   D  R+++   +      P+   + A+L+ A++ S  E+   V T+ S V++R + 
Sbjct: 26  LLTRHDFARLELACFEQLDLLNPMQPFVRAKLEEARIVSGNEIAETVATLGSIVRYR-IE 84

Query: 67  DGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
           D  +  R L    +   +   LSV+ P+G ALLG   GD    EL  G    + +  +E+
Sbjct: 85  DRMLERRLLQLDNRHAPNGQYLSVLTPIGLALLGRSTGDLCEAELFNGAKLTIRIALIEH 144

Query: 127 QPEAA 131
           QPEA 
Sbjct: 145 QPEAE 149


>UniRef50_Q04EK0 Transcription elongation factor greA n=4 Tax=Bacilli
           RepID=GREA_OENOB
          Length = 162

 Score = 98.8 bits (245), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 24/92 (26%), Positives = 46/92 (50%)

Query: 33  ALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMA 92
            L   +  AQ+        +VVT+  ++ F+ + DG+    T+V  A+    + ++S  +
Sbjct: 67  QLQQMIQFAQVIDASSASKNVVTLGKKISFKEVPDGDEETYTIVGSAESDPLSGKISNDS 126

Query: 93  PVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
           P+G ALL  + GD +   LP   +  +E+L +
Sbjct: 127 PMGKALLDHKTGDKVEIPLPENHSVTVEILHV 158


>UniRef50_A8HR94 Transcription elongation factor greA n=5 Tax=Proteobacteria
           RepID=GREA_AZOC5
          Length = 157

 Score = 97.3 bits (241), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 1/93 (1%)

Query: 33  ALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMA 92
            L  ++ RA++    ++  D+V   + V   +    E RV  +V  ++      ++S+ +
Sbjct: 64  ELEDKISRAEVIDVSKLSGDIVKFGATVTLVDEDTEEERVWQIVGDSEADAKAGRISISS 123

Query: 93  PVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
           PV  AL+G + G S+    P G A   E++E+ 
Sbjct: 124 PVARALIGKKKGSSVEVVTPKG-ARSFEIVEVR 155


>UniRef50_Q1H282 GreA/GreB family elongation factor n=2 Tax=Proteobacteria
           RepID=Q1H282_METFK
          Length = 165

 Score = 97.3 bits (241), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 25/99 (25%), Positives = 46/99 (46%), Gaps = 2/99 (2%)

Query: 28  LPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQ 87
                 L A L+ A +  P   P D V   + V+  +  +G      +V   +   +  +
Sbjct: 69  DRDLRYLQARLESAIVVDPATQPTDTVLFGATVEVED-ENGNSHTFMIVGEDEADIATNR 127

Query: 88  LSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
           +S ++P+  AL+G ++GDS+ W  P G    LE++ + Y
Sbjct: 128 VSWVSPLAKALIGQKIGDSVTWHRPAG-NLELEIIAIHY 165


>UniRef50_A3ESJ0 Transcription elongation factor n=4 Tax=Bacteria RepID=A3ESJ0_9BACT
          Length = 160

 Score = 96.9 bits (240), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 1/95 (1%)

Query: 33  ALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMA 92
            L A++  A + S     H  +T  + V+   L   E +  TLV   +      ++SV +
Sbjct: 64  ELEAKIASAIVVSSAHQDHSRITFGATVRLVPLDSKEEKRYTLVGQEEADLKAGRISVHS 123

Query: 93  PVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQ 127
           PVG AL+G   G+++   +P G   +  + E+ Y+
Sbjct: 124 PVGKALIGHSEGETVTIRVPAGEVQY-TIAEIFYE 157


>UniRef50_Q7UVA0 Transcription elongation factor greA n=3 Tax=Planctomycetaceae
           RepID=GREA_RHOBA
          Length = 159

 Score = 96.9 bits (240), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 22/95 (23%), Positives = 46/95 (48%), Gaps = 1/95 (1%)

Query: 32  DALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVM 91
           + L  ++ RA +     +P D V     V   +++ G+    TLV        + ++ V 
Sbjct: 64  NELRDKIARASIIDVSSLPKDEVVFGCTVTVEDVAYGDEEQFTLVGAGDEDYDSGKILVT 123

Query: 92  APVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
           +P G  L+G +VG++   ++P G     ++L++E+
Sbjct: 124 SPFGQGLVGKKVGETAEVDVPAG-KLKFKILKIEF 157


>UniRef50_Q3Z8E7 Transcription elongation factor greA n=2 Tax=Dehalococcoides
           RepID=GREA_DEHE1
          Length = 156

 Score = 96.5 bits (239), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 24/94 (25%), Positives = 44/94 (46%), Gaps = 1/94 (1%)

Query: 33  ALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMA 92
            +  EL  A +    +     V M S VK R+  +GE    TLV P ++     ++S  +
Sbjct: 64  EIEHELKYADVSEYTDTNTSKVNMGSTVKLRDPKNGECCTYTLVSPKEIEPLKGKISASS 123

Query: 93  PVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
           P+G A+     G+ I  E+P G   ++ + ++ +
Sbjct: 124 PIGKAVFNRNKGEQIEIEVPSGTLQYI-IEDISF 156


>UniRef50_D1B632 Transcription elongation factor n=4 Tax=Synergistaceae
           RepID=D1B632_THEAS
          Length = 164

 Score = 95.7 bits (237), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 43/92 (46%), Gaps = 1/92 (1%)

Query: 33  ALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMA 92
            L  +L +A++    ++    V++ + V+ R+L  G      LV   +      ++S  +
Sbjct: 71  WLEYQLSKAKVVESSDIDTSTVSLGATVQLRDLDTGNTYTYVLVGSEEADPKANRISAQS 130

Query: 93  PVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
           PVG A++G   G+ +   +P G   HL +  +
Sbjct: 131 PVGKAIIGRAEGEEVIVRVPKGT-RHLRIERI 161


>UniRef50_B1MX52 Transcription elongation factor greA n=11 Tax=Firmicutes
           RepID=GREA_LEUCK
          Length = 160

 Score = 95.7 bits (237), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 25/92 (27%), Positives = 45/92 (48%)

Query: 34  LNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAP 93
           L   ++ A++  P     DVV++   V F+ L D E     +V   +      ++S  + 
Sbjct: 68  LKKMIENAEIIDPNATAADVVSLGKTVTFKELPDEEPETYAIVGSTESDPLAGKISNESA 127

Query: 94  VGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
           +  ALL  +VGD +   LP G +  +E+L++E
Sbjct: 128 MAVALLDKKVGDKVSVPLPSGESIDVEILKVE 159


>UniRef50_UPI0001C3129D transcription elongation factor GreA n=1 Tax=Conexibacter woesei
           DSM 14684 RepID=UPI0001C3129D
          Length = 161

 Score = 95.3 bits (236), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 24/92 (26%), Positives = 44/92 (47%)

Query: 33  ALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMA 92
            L  +L  A +     +  DVV + S V+  +   G+     +V  A+   +  +LS  +
Sbjct: 65  QLEEKLRAATVIDSRSVGTDVVGIGSSVQVADSQSGKSDTYVIVGSAEANPAERKLSNES 124

Query: 93  PVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
           PVG AL+G + G++   +LP G    L + ++
Sbjct: 125 PVGKALIGRKAGETATVQLPNGKQRELRITKI 156


>UniRef50_C0QWD9 Transcription elongation factor n=2 Tax=Brachyspira
           RepID=C0QWD9_BRAHW
          Length = 154

 Score = 94.9 bits (235), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 25/92 (27%), Positives = 47/92 (51%), Gaps = 1/92 (1%)

Query: 33  ALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMA 92
            L ++L   ++  P  +  D VT   RVK ++ S   V    +V   +   S  +++++ 
Sbjct: 62  KLESDLAGCEIIDPANLDKDTVTFGKRVKVKDKSRNAVFEYRIVGELEADMSKNEITIVT 121

Query: 93  PVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
           P+   LLG ++GD +  ++P G    LE+LE+
Sbjct: 122 PIAKGLLGKKIGDVVTIKVPAG-DKVLEILEI 152


>UniRef50_B3E3H5 Transcription elongation factor greA n=19 Tax=Proteobacteria
           RepID=GREA_GEOLS
          Length = 158

 Score = 94.6 bits (234), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 23/95 (24%), Positives = 46/95 (48%), Gaps = 1/95 (1%)

Query: 33  ALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMA 92
            L  +L RA +     +  D V   + V   + +  E     +V   +      ++S  +
Sbjct: 65  ELQGKLARAHVVDLTGLKPDKVVFGATVTLYDTASEEEITYKIVGEDEADIKLGKISCTS 124

Query: 93  PVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQ 127
           PVG AL+G ++ DS+  ++P G   + E++E++Y+
Sbjct: 125 PVGKALIGHKLDDSVKVKVPAGTKEY-EIIEIKYE 158


>UniRef50_Q30T56 Transcription elongation factor n=3 Tax=Campylobacterales
           RepID=Q30T56_SULDN
          Length = 174

 Score = 94.6 bits (234), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 31/118 (26%), Positives = 53/118 (44%), Gaps = 5/118 (4%)

Query: 14  ERIDILLEQPAYAGLPIADA----LNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGE 69
           +R +    Q A   L   D     LNA + +A +  P  + H  V+  S V+  +L   +
Sbjct: 40  DRSENADYQAAKEKLRHIDKRLFYLNAMIQKAHIIDPSTLLHTKVSFGSSVRILDLESDK 99

Query: 70  VRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQ 127
             V T+    +    N  +S+ +P+   +LG RV D    +LP  +    E+LE+ Y+
Sbjct: 100 EEVYTICGVLESEPENGLISIHSPLAQVMLGKRVSDEFKIQLPL-MKKEYEILEIYYK 156


>UniRef50_Q3ATA7 Transcription elongation factor greA n=13 Tax=Bacteria
           RepID=GREA_CHLCH
          Length = 160

 Score = 93.8 bits (232), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 37/121 (30%), Positives = 61/121 (50%), Gaps = 8/121 (6%)

Query: 9   NDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSD- 67
            + DA R     E+ +     I D L ++L  A +  P+++  D V + + VK RNL + 
Sbjct: 47  AEYDAAR-----EEQSQIEARIGD-LESKLSAATILDPKQIKTDKVYILTSVKLRNLDNP 100

Query: 68  GEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQ 127
            E+   TLV   +      ++SV +PVG +L+G  VG  +   +P G   H E+LE+  +
Sbjct: 101 DEIIEYTLVSSEEADTDAGKISVRSPVGRSLIGKTVGAKVTIVVPKG-ELHYEILEIFVK 159

Query: 128 P 128
           P
Sbjct: 160 P 160


>UniRef50_A0AIU5 Transcription elongation factor greA n=99 Tax=Bacteria
           RepID=GREA_LISW6
          Length = 160

 Score = 93.4 bits (231), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 22/90 (24%), Positives = 44/90 (48%), Gaps = 1/90 (1%)

Query: 35  NAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPV 94
              +  AQ+    E  + +VT+ + V F  L DGE    T+V  A+      ++S  +P+
Sbjct: 69  ENMIRNAQIIDAAEAHNGLVTLGNTVTFIELPDGEEETYTIVGSAEADPFEGKISNDSPI 128

Query: 95  GAALLGLRVGDSIHWELPGGVATHLEVLEL 124
              LLG + G+ +  + P G   ++++ ++
Sbjct: 129 AKGLLGHKEGEEVTIQTPAG-DMNVKIEKI 157


>UniRef50_B2S6W5 Transcription elongation factor greA n=39 Tax=Bacteria
           RepID=GREA_BRUA1
          Length = 157

 Score = 93.0 bits (230), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 32/132 (24%), Positives = 58/132 (43%), Gaps = 9/132 (6%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLPIADALNA----ELD----RAQMCSPEEMPHDVV 54
           RP II    +A     L E   Y     A +LN     EL+    RA++    ++  D +
Sbjct: 26  RPRIIEAIAEARAHGDLSENAEYHAAKEAQSLNEGRINELEDLVARAEVIDVSKLTGDRI 85

Query: 55  TMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGG 114
              + V   +    E ++  +V   +      ++S+ +P+  AL+G   GD+I    PGG
Sbjct: 86  KFGATVTMIDEDTEEEKIYQIVGDQEADVKEGRISISSPIARALIGKGEGDTIEVNAPGG 145

Query: 115 VATHLEVLELEY 126
            +   E++ L++
Sbjct: 146 -SRSYEIIALKF 156


>UniRef50_B9KH08 Transcription elongation factor n=9 Tax=Rickettsiales
           RepID=B9KH08_ANAMF
          Length = 174

 Score = 93.0 bits (230), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 31/136 (22%), Positives = 54/136 (39%), Gaps = 12/136 (8%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLPIAD--------ALNAELDRAQMCSPEEMPHDVV 54
           RP II +  DA  +  L E   Y                L ++  RA++    E+  D V
Sbjct: 38  RPKIIKSISDARELGDLSENAEYHAARERQGLVESKIMELESKRSRAEVIDVSELSGDTV 97

Query: 55  TMNSRVKF----RNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWE 110
              + V             V    +V   +   S   +S+ +P+  +LLG R GDS+  +
Sbjct: 98  MFGATVTVSVYDEQTDSTGVMQYQIVGEYEADVSKNMISIKSPLVLSLLGRREGDSVEVK 157

Query: 111 LPGGVATHLEVLELEY 126
            P G     +++++E+
Sbjct: 158 TPRGDYKIYQIMKIEF 173


>UniRef50_D0LKY5 Transcription elongation factor n=1 Tax=Haliangium ochraceum DSM
           14365 RepID=D0LKY5_HALO1
          Length = 169

 Score = 92.2 bits (228), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 23/94 (24%), Positives = 47/94 (50%), Gaps = 1/94 (1%)

Query: 35  NAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPV 94
            A+L  +++  P ++  + V   + V   ++  G+    T+V   +    N ++SV APV
Sbjct: 67  EAKLALSEVIDPTKLSGERVKFGATVTVEDIDTGDEATYTIVGEHEADIKNKRISVTAPV 126

Query: 95  GAALLGLRVGDSIHWELPGGVATHLEVLELEYQP 128
             AL+G  +GD    + P G     E++++++ P
Sbjct: 127 ARALIGKAIGDETQVQTPKGT-RAFEIVDVKWLP 159


>UniRef50_A9WK05 Transcription elongation factor greA n=6 Tax=Chloroflexi (class)
           RepID=GREA_CHLAA
          Length = 157

 Score = 91.9 bits (227), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 1/94 (1%)

Query: 32  DALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVM 91
             L   L RA++   ++  +  V + S V  R   DG     T+V  A+      ++S  
Sbjct: 65  RELKHLLSRAEVIDEDQASNGEVRVGSSVTVRFEDDGTEETWTIVGSAEANPRQGRISNE 124

Query: 92  APVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
           +P+GAALLG R  + +    P GV   L +L++ 
Sbjct: 125 SPLGAALLGKRARNKVTVHTPSGV-MKLTILKVR 157


>UniRef50_C9KJ19 Transcription elongation factor n=1 Tax=Mitsuokella multacida DSM
           20544 RepID=C9KJ19_9FIRM
          Length = 156

 Score = 91.9 bits (227), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 3/92 (3%)

Query: 34  LNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAP 93
           L A++  + +        DVV M S+V  +++  G+     LV   +      ++S  +P
Sbjct: 67  LTAKIRNSHIIKAGA--GDVVQMGSKVTVKDIEFGDEETFMLVGSTEADPDEGKISNESP 124

Query: 94  VGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
           +G ALLG + G  I    P G+  + E+L+++
Sbjct: 125 LGQALLGQKSGSVIDVHAPAGIIKY-EILDIK 155


>UniRef50_C1ZBG3 Transcription elongation factor n=1 Tax=Planctomyces limnophilus
           DSM 3776 RepID=C1ZBG3_PLALI
          Length = 160

 Score = 91.5 bits (226), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 24/96 (25%), Positives = 48/96 (50%), Gaps = 3/96 (3%)

Query: 32  DALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNT--QLS 89
           ++L ++L    +     +P  VV   +RV  +N  DG++     V P +    +   ++ 
Sbjct: 63  NSLKSKLASCYIVDKSTLPKGVVAFGTRVTVKNTDDGDIEKYEFVGPGEEDYMSDVMKIL 122

Query: 90  VMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
             +P+ +ALLG +V D +  ++P G   + E+ E+E
Sbjct: 123 TTSPLASALLGKKVNDKVSIQVPRGTINY-EITEIE 157


>UniRef50_C6WVB7 GreA/GreB family elongation factor n=2 Tax=Methylophilaceae
           RepID=C6WVB7_METML
          Length = 168

 Score = 91.1 bits (225), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 55/121 (45%), Gaps = 7/121 (5%)

Query: 12  DAERIDILLEQPAYAG-----LPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLS 66
           +  R+ +  +                 + A LD A +  P +  H+ V   + ++  +  
Sbjct: 49  ELNRLKLTADDTFAKDKVAEIERDLRYVRARLDSAILVDPTKQSHETVLFGATIEVED-G 107

Query: 67  DGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
            G      +V   +   S  ++S ++P+  +LLG +VGD++ W+ P G   +LE+L++ Y
Sbjct: 108 AGAQHTFHIVGEDEADASINKVSWVSPLAKSLLGQKVGDTVTWQRPAG-NINLEILDIHY 166

Query: 127 Q 127
           Q
Sbjct: 167 Q 167


>UniRef50_Q2LR03 Transcription elongation factor greA n=1 Tax=Syntrophus
           aciditrophicus SB RepID=GREA_SYNAS
          Length = 161

 Score = 90.7 bits (224), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 1/96 (1%)

Query: 33  ALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMA 92
            L   L  + +   + +  D +   + V     S G+     LV P +   S  ++SV +
Sbjct: 64  ELENNLALSNVIDLKMLSDDRIVFGATVIIEEASTGKQTNYQLVGPFESNISENKISVTS 123

Query: 93  PVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQP 128
           P+G AL+G  +GD +    PGG+  + EV+++   P
Sbjct: 124 PIGKALIGKSIGDEVKVHTPGGI-RNFEVVDIYINP 158


>UniRef50_Q0B0N4 Transcription elongation factor greA n=6 Tax=Clostridia
           RepID=GREA_SYNWW
          Length = 159

 Score = 90.7 bits (224), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 24/93 (25%), Positives = 51/93 (54%), Gaps = 1/93 (1%)

Query: 33  ALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMA 92
           +L   L +A++   E++  DVV++ SR+  + +  G     TLV   +    + ++S  +
Sbjct: 67  SLEKTLKKARLMEDEDIRTDVVSLGSRITLKEMKSGREVTVTLVSSVESKLKDGKISDES 126

Query: 93  PVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
           PVG A++G +V  ++  E P G   + +++++E
Sbjct: 127 PVGKAIMGKKVKSTVSVEAPAGTIKY-KIIKVE 158


>UniRef50_Q817Z6 Transcription elongation factor greA n=141 Tax=cellular organisms
           RepID=GREA_BACCR
          Length = 158

 Score = 90.3 bits (223), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 22/93 (23%), Positives = 45/93 (48%), Gaps = 1/93 (1%)

Query: 33  ALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMA 92
            L   +  A +         VVT+   V F+ L +G+    T+V  A+      ++S  +
Sbjct: 67  QLENMIRNAVIIKDTGEVSTVVTLGKTVTFKELPNGDEEAYTIVGSAEADPFEGRISNDS 126

Query: 93  PVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
           P+  +LLG ++G+ +  + PGG    +E++ ++
Sbjct: 127 PIAKSLLGKQIGEKVTIQTPGGEMQ-VEIVSVK 158


>UniRef50_Q057J4 Transcription elongation factor greA n=20 Tax=Proteobacteria
           RepID=GREA_BUCCC
          Length = 159

 Score = 90.3 bits (223), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 30/135 (22%), Positives = 57/135 (42%), Gaps = 10/135 (7%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIAD--------ALNAELDRAQMCSPEEMP-H 51
           ++RP I+    +A ++  L E   Y                +  +L RAQ+    ++P  
Sbjct: 25  ITRPCIVKAIANARQLGDLKENAEYHSAREEQSFCENRICEIENKLLRAQIIDITKIPFK 84

Query: 52  DVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWEL 111
            +V   S V    +S   + V T+V   +       +S+ +P+  AL+G +  D I    
Sbjct: 85  GIVIFGSTVTVLQISTSNIFVYTIVGDDEANYKEFSISIHSPMSRALIGKKKNDIIKVNT 144

Query: 112 PGGVATHLEVLELEY 126
           P G   ++ + ++EY
Sbjct: 145 PTGYIKYI-IKKIEY 158


>UniRef50_A8F083 Transcription elongation factor greA n=13 Tax=Rickettsia
           RepID=GREA_RICCK
          Length = 162

 Score = 90.3 bits (223), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 22/95 (23%), Positives = 43/95 (45%), Gaps = 1/95 (1%)

Query: 33  ALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMA 92
            L     RA++    ++  D +   + V   +    E     +V   +   +  ++S+ +
Sbjct: 65  ELEDMAARAEIIDISKLSGDNIKFGATVTLIDDDTEEKVTYIVVGEYEADITRKRVSIAS 124

Query: 93  PVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQ 127
           P+  AL+G  VGD +    P G +   EV+E+EY+
Sbjct: 125 PIAKALIGKSVGDFVEVTTPKG-SKSYEVVEVEYK 158


>UniRef50_C9RKD0 Transcription elongation factor n=1 Tax=Fibrobacter succinogenes
           subsp. succinogenes S85 RepID=C9RKD0_FIBSS
          Length = 151

 Score = 89.5 bits (221), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 27/103 (26%), Positives = 47/103 (45%), Gaps = 2/103 (1%)

Query: 21  EQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAK 80
           E+ A         L  +L RAQ+    +   D +   + +  +NL      V  LV P +
Sbjct: 49  ERLASIDNIEMPKLQDQLARAQVI-AFDANSDTIKFGATITAKNLKTKREIVYQLVSPEE 107

Query: 81  MTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLE 123
               N ++S  +P+GAAL+G + GD++    P G     E+++
Sbjct: 108 ADALNGKISFKSPIGAALMGKKRGDTVEVVTPKGKNQ-FEIID 149


>UniRef50_Q0A765 Transcription elongation factor greA n=23 Tax=Proteobacteria
           RepID=GREA_ALHEH
          Length = 158

 Score = 89.2 bits (220), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 30/135 (22%), Positives = 50/135 (37%), Gaps = 10/135 (7%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIAD--------ALNAELDRAQMCSPEEMPH- 51
           + RP II    +A     L E   Y                +  +L  AQ+  P  +   
Sbjct: 24  VERPRIIQAIAEAREHGDLKENAEYHAAREQQSFVEGRIQEIEGKLSNAQVIDPAAVNAQ 83

Query: 52  DVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWEL 111
             V   + V   +   G+     +V   +       +SV +P+  AL+G   GD +  + 
Sbjct: 84  GKVIFGATVDLVDEDSGKEVTYQIVGEDEADIKQGLVSVNSPIARALIGKEEGDLVTVQA 143

Query: 112 PGGVATHLEVLELEY 126
           PGG     E++E+ Y
Sbjct: 144 PGG-EREYEIVEVRY 157


>UniRef50_C6XVH8 Transcription elongation factor n=1 Tax=Pedobacter heparinus DSM
           2366 RepID=C6XVH8_PEDHD
          Length = 125

 Score = 89.2 bits (220), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 34/120 (28%), Positives = 65/120 (54%), Gaps = 2/120 (1%)

Query: 5   TIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRN 64
           +II++    + +   + +   +     + L  EL  A+    +++P DVVT+N+RV+ + 
Sbjct: 4   SIILSTGIFDLLKDHIRRRKLSKYN-QEKLEQELRNARQILSKDIPADVVTVNTRVRVKE 62

Query: 65  LSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
           L  G     TLV PAK  + +  LS+++P+G A++G   G  + WE+P G+  +  + E+
Sbjct: 63  LETGAEFNYTLVPPAKARNKHNTLSILSPIGVAMVGYSQGSELKWEMPEGIKAY-RIEEV 121


>UniRef50_Q725M4 Transcription elongation factor greA n=4 Tax=Desulfovibrionaceae
           RepID=GREA_DESVH
          Length = 163

 Score = 88.0 bits (217), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 1/84 (1%)

Query: 43  MCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLR 102
           +   + +  D V   + VK  +L  GE +  TL+ P +   +   +SV +PV  A+LG  
Sbjct: 73  VIDLDTISGDKVMFGATVKIEDLESGEEKEYTLLGPDEADYAKGSISVQSPVARAMLGKE 132

Query: 103 VGDSIHWELPGGVATHLEVLELEY 126
            GD I  + P G   H E++ + +
Sbjct: 133 EGDEIVVDAPRG-KIHYEIVSIRF 155


>UniRef50_Q67JL1 Transcription elongation factor n=2 Tax=Clostridiales
           RepID=Q67JL1_SYMTH
          Length = 157

 Score = 88.0 bits (217), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 25/92 (27%), Positives = 47/92 (51%), Gaps = 1/92 (1%)

Query: 34  LNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAP 93
           L   L  A++        +VV + S V  R+L  G+    T+V   +   ++ ++S  +P
Sbjct: 67  LEKMLRNARVIDEPVGQQEVVVLGSTVVLRDLEYGDEHTYTIVGTTEADPAHNRISNESP 126

Query: 94  VGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
           VG A++G RVG  +  + P GV  + E++ ++
Sbjct: 127 VGRAIMGQRVGTVVAVDAPDGVFKY-EIVAIK 157


>UniRef50_D1PEW3 Transcription elongation factor n=1 Tax=Prevotella copri DSM 18205
           RepID=D1PEW3_9BACT
          Length = 154

 Score = 88.0 bits (217), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 45/88 (51%), Gaps = 1/88 (1%)

Query: 38  LDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAA 97
           L+ A++     +  D V + S++K  NL++      T+V P +    + ++S+ +P+  A
Sbjct: 67  LENARVIDKSRLKSDTVGLLSKIKITNLANKCSMNYTIVNPHEADLHSGKISIKSPIAKA 126

Query: 98  LLGLRVGDSIHWELPGGVATHLEVLELE 125
           LLG + G+ +  ++P G      +  +E
Sbjct: 127 LLGKKAGEEVMVKVPAG-LLKFRLDSVE 153


>UniRef50_A0LK20 Transcription elongation factor greA n=1 Tax=Syntrophobacter
           fumaroxidans MPOB RepID=GREA_SYNFM
          Length = 156

 Score = 87.6 bits (216), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 1/92 (1%)

Query: 34  LNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAP 93
           L  ++   ++  P +  +      S V   +   GEV    LV P +    +  +SV++P
Sbjct: 65  LCQKMGECEIVEPSDNDNGRAIFGSTVVVEDTETGEVTSYRLVGPYEADVQSGTISVVSP 124

Query: 94  VGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
           +G AL+G   G+ I  + P GV  ++EVLE+ 
Sbjct: 125 LGKALIGKEEGEEIRVQTPKGV-RNIEVLEIR 155


>UniRef50_Q1LSK1 Transcription elongation factor greA n=16 Tax=Proteobacteria
           RepID=GREA_BAUCH
          Length = 158

 Score = 86.9 bits (214), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 30/135 (22%), Positives = 57/135 (42%), Gaps = 10/135 (7%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIAD--------ALNAELDRAQMCSPEEM-PH 51
           + RP II N  +A     L E   Y                + ++L  AQ+    ++ P 
Sbjct: 24  VRRPEIIRNIAEAREYGDLKENAEYHAAREQQGFCEGRIQEIESKLSHAQIIDVTKLFPS 83

Query: 52  DVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWEL 111
             V     V  +NL+  E +   +V   +    +  +S+ +P+   L+G + GD +  + 
Sbjct: 84  GKVVFGVTVSVQNLNINEEQTYRIVGDDEANFKHNLISISSPIARGLIGKKKGDIVLIKT 143

Query: 112 PGGVATHLEVLELEY 126
           P G   + ++L++EY
Sbjct: 144 PRGEVKY-QILKIEY 157


>UniRef50_C9RNS9 GreA/GreB family elongation factor n=1 Tax=Fibrobacter succinogenes
           subsp. succinogenes S85 RepID=C9RNS9_FIBSS
          Length = 169

 Score = 86.9 bits (214), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 50/117 (42%), Gaps = 5/117 (4%)

Query: 14  ERIDILLEQPAYAGLPIADALNAELDR----AQMCSPEEMPHDVVTMNSRVKFRNLSDGE 69
           +R +          +   D    ELDR    AQ+          +   + VK  +     
Sbjct: 54  DRSENAAYTYGRMRVREIDRRLRELDRILDGAQIVENAATKDGSIRFGATVKMIDKKTKR 113

Query: 70  VRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
            ++ ++V   ++     ++S+ +P+G AL G + GD++  + P G   + E+LE+ Y
Sbjct: 114 EKIYSIVGDKEIDPLQGRISMKSPIGEALQGKKAGDTVEVQAPRGKIVY-EILEVNY 169


>UniRef50_C7PP41 Transcription elongation factor n=1 Tax=Chitinophaga pinensis DSM
           2588 RepID=C7PP41_CHIPD
          Length = 157

 Score = 86.9 bits (214), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 18/105 (17%), Positives = 43/105 (40%), Gaps = 1/105 (0%)

Query: 20  LEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPA 79
            ++           L + +  A++   + +    V++  +V   N+++ +     LV   
Sbjct: 52  AKEAQGMHEAKVAILESAIATARIVEADSIDTSKVSILCKVTITNMANKKTVTYQLVSEK 111

Query: 80  KMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
           +      ++SV +P+G  LLG  VG+      P G +   ++  +
Sbjct: 112 EADLKLNKISVTSPIGKGLLGKAVGEIADVHAPNG-SLKFKIENI 155


>UniRef50_C4L6P4 GreA/GreB family elongation factor n=1 Tax=Exiguobacterium sp. AT1b
           RepID=C4L6P4_EXISA
          Length = 152

 Score = 86.5 bits (213), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 30/106 (28%), Positives = 46/106 (43%), Gaps = 3/106 (2%)

Query: 20  LEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPA 79
             +           LN  LD A +     +  +VVT  +RV  R +   E     +V  A
Sbjct: 49  AVRQYERIEADILELNHLLDDATIVES--VQSEVVTFGNRVVIREVQQEETERYRIVSEA 106

Query: 80  KMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
           +       +SV +P+G  L+G  +G +I  E PGG    +EVL +E
Sbjct: 107 EADLERGSISVTSPLGRRLMGATMGQTIQVETPGGTIQ-VEVLHIE 151


>UniRef50_A8SDG2 Transcription elongation factor n=2 Tax=Clostridiales
           RepID=A8SDG2_9FIRM
          Length = 161

 Score = 85.7 bits (211), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 25/94 (26%), Positives = 40/94 (42%)

Query: 33  ALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMA 92
            L   +  A +    E+  D V++ + V  R   + E     +V   +    N ++S  +
Sbjct: 65  ELEQTIKNAVIIDESELSVDNVSVGTHVTIRETGEDEAEEYDIVGRTEADAFNGKISDES 124

Query: 93  PVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
           PVG AL+G  VGD     LP G      VL + +
Sbjct: 125 PVGHALMGKAVGDKAEVLLPTGQTVVYTVLAITH 158


>UniRef50_Q01RT9 GreA/GreB family elongation factor n=2 Tax=Acidobacteria
           RepID=Q01RT9_SOLUE
          Length = 164

 Score = 85.3 bits (210), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 1/92 (1%)

Query: 33  ALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMA 92
            L + L +  M    ++P D   + S V   ++   +     LV   +    N ++S  +
Sbjct: 58  QLKSRLGQLAMIDFTKIPRDKAGLGSTVVVLDVKSDQEITYHLVTSEEADAPNGKVSTTS 117

Query: 93  PVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
           P+G ALLG  VGD +    PGGV   LE+L+L
Sbjct: 118 PIGRALLGKTVGDEVKVMSPGGV-KELEILKL 148


>UniRef50_C4XLU8 Transcription elongation factor greA n=11 Tax=Desulfovibrionales
           RepID=GREA_DESMR
          Length = 164

 Score = 85.3 bits (210), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 28/100 (28%), Positives = 51/100 (51%), Gaps = 2/100 (2%)

Query: 35  NAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPV 94
            + + R  +     +  + V   + V+  ++  G+V+  TL+ P +   S   +S+++PV
Sbjct: 65  ESRMSRFNVIDLATLGGEQVIFGATVEIEDVDTGDVKKYTLLGPDEAEPSKGSISLLSPV 124

Query: 95  GAALLGLRVGDSIHWELPGGVATHLEVLELEYQ-PEAAGD 133
           G ALLG  VGD I  + P G   + E++ + +  P AA D
Sbjct: 125 GLALLGKFVGDEIVVDAPRG-KINYEIVSIAFHGPIAAAD 163


>UniRef50_C7GYY1 Transcription elongation factor n=1 Tax=Eubacterium saphenum ATCC
           49989 RepID=C7GYY1_9FIRM
          Length = 158

 Score = 84.5 bits (208), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 43/91 (47%)

Query: 34  LNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAP 93
           L   L+  ++        DVV +   V  +N++  +     +V  A+    N  +S  +P
Sbjct: 66  LEDMLNNYEIIDSNAAKGDVVDLGLNVHLKNITKKKEETYRIVGSAEADPFNNLISNESP 125

Query: 94  VGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
           +G  LL  +VG+++  ++P G     ++L++
Sbjct: 126 IGKGLLKHKVGETVSIDIPSGKTVKYKILKI 156


>UniRef50_UPI0001C37CEA transcription elongation factor GreA n=1 Tax=Ruminococcus
           flavefaciens FD-1 RepID=UPI0001C37CEA
          Length = 156

 Score = 84.2 bits (207), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 1/92 (1%)

Query: 33  ALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMA 92
            L   +D A++     +  D + M+S++  + L  G++   T+V          ++S  +
Sbjct: 64  ELQYTIDNAEIVDDSNISVDEIGMSSKITIKRLDTGKIETFTIVSTNHANVREGKISDAS 123

Query: 93  PVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
           P+G A +  RVGD    + P G     EV+E+
Sbjct: 124 PIGKAAMKKRVGDVFIVDAPAG-ELKFEVVEI 154


>UniRef50_C0JZV3 Transcription elongation factor GreA n=1 Tax=uncultured bacterium
           URE4 RepID=C0JZV3_9BACT
          Length = 112

 Score = 84.2 bits (207), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 20/92 (21%), Positives = 44/92 (47%), Gaps = 1/92 (1%)

Query: 33  ALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMA 92
            L  ++  A++    ++  D V + S+V   N++        +V  ++   S   LS   
Sbjct: 20  RLKEKVANARVIDESKLSADTVQLLSKVTVENMNAKMKMQFQIVGESEADFSKGLLSAST 79

Query: 93  PVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
           P+G AL+G   G+ +  ++P G+    ++L++
Sbjct: 80  PIGKALMGHGKGEVVEAKVPSGI-MKFKILDI 110


>UniRef50_B9KZF4 Transcription elongation factor greA n=2 Tax=Thermomicrobia (class)
           RepID=B9KZF4_THERP
          Length = 156

 Score = 84.2 bits (207), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 3/94 (3%)

Query: 32  DALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVM 91
             +   L RAQM +    P D V + SRV   +   G V    +V P +   +  ++S+ 
Sbjct: 66  REIEHILRRAQMIT-RAGPQDEVRLGSRVTVIDEE-GSVETWVIVSPEEANAAQGRISIE 123

Query: 92  APVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
           +PVGAALLG RVG ++    PGG      +  +E
Sbjct: 124 SPVGAALLGKRVGTTVTVRAPGG-EMRFTIQRIE 156


>UniRef50_B4RBL3 Transcription elongation factor GreA/GreB family n=1
           Tax=Phenylobacterium zucineum HLK1 RepID=B4RBL3_PHEZH
          Length = 131

 Score = 83.8 bits (206), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 29/115 (25%), Positives = 56/115 (48%), Gaps = 4/115 (3%)

Query: 12  DAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVR 71
           D +R+  +       GL   + L  E++R  + + +++    V +NS V +++L     R
Sbjct: 19  DLKRLRAISLSRQAPGL-GQELLRREVERMAIRAYDDLR--FVRLNSTVTYKDLRTRRRR 75

Query: 72  VRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP-GGVATHLEVLELE 125
           +  +V P        ++S+++P+GAAL+GL  G    W     G    ++VL +E
Sbjct: 76  IVQVVQPEHAHQDENRVSILSPIGAALIGLPEGSVFRWAERIDGATRAVKVLAVE 130


>UniRef50_Q2Z001 Transcription elongation factor n=1 Tax=uncultured candidate
           division OP8 bacterium RepID=Q2Z001_9BACT
          Length = 156

 Score = 83.8 bits (206), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 22/93 (23%), Positives = 43/93 (46%), Gaps = 1/93 (1%)

Query: 34  LNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAP 93
           L   +  A +  P ++  + V   +RV  +NL  GE  V  LV   +       +S+ +P
Sbjct: 65  LQGRISHAAVIDPSKLSGNRVVFGARVFLKNLDTGEPIVYRLVGEDEADIEQGSISITSP 124

Query: 94  VGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
           +   L+   VG+     +P G+    E++++E+
Sbjct: 125 LARGLIRREVGEQAKIAVPSGI-KSFEIVKIEF 156


>UniRef50_Q04HS9 Transcription elongation factor greA n=90 Tax=Bacilli
           RepID=GREA_STRP2
          Length = 160

 Score = 83.8 bits (206), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 22/93 (23%), Positives = 48/93 (51%), Gaps = 1/93 (1%)

Query: 33  ALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMA 92
           +L  ++  A++ + + +  D V +   V  + + + E  V  +V  A       ++S  +
Sbjct: 66  SLETKIRYAEIVNSDAVAQDEVAIGKTVTIQEIGEDEEEVYIIVGSAGADAFAGKVSNES 125

Query: 93  PVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
           P+G AL+G + GD+   E P G +  +++L++E
Sbjct: 126 PIGQALIGKKTGDTATIETPVG-SYDVKILKVE 157


>UniRef50_A3HZU2 Transcription elongation factor GreB n=2 Tax=Bacteroidetes
           RepID=A3HZU2_9SPHI
          Length = 166

 Score = 83.0 bits (204), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 20/93 (21%), Positives = 42/93 (45%), Gaps = 1/93 (1%)

Query: 34  LNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAP 93
           L+  +  A++    E P + +   ++V  +     +     LV   +   S  ++S ++P
Sbjct: 75  LDERIATAKIVDLSEQPKNEIRFGAKVTLKIGKSPKAMTYQLVGVDEADISKNKISFISP 134

Query: 94  VGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
           +   L+G +VG+     L  G     EV+E++Y
Sbjct: 135 IAMILIGKKVGEKATLSLTKG-DRVFEVMEIKY 166


>UniRef50_A0M1N1 GreA-like transcription elongation factor n=3 Tax=Flavobacteriaceae
           RepID=A0M1N1_GRAFK
          Length = 166

 Score = 83.0 bits (204), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 59/125 (47%), Gaps = 7/125 (5%)

Query: 8   INDLDAERIDILLEQPAYAGLPIA------DALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
           + DL+ ER  +  E         +      + L+  L  A++   ++ P D +   +RVK
Sbjct: 43  LKDLEYERAHVEAENDTEKRRAQSLIDGKINLLSERLQTARLLDSKDQPKDEIRFGARVK 102

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
             N + G+++   +V   +      +++ +AP+  A+ G +VG+ I ++L G     L+V
Sbjct: 103 LTNETSGQLQEFQIVGVDEADIKKKKIAFVAPIAKAVTGRKVGEEIDFKL-GNEIRKLKV 161

Query: 122 LELEY 126
           L + Y
Sbjct: 162 LGITY 166


>UniRef50_Q1H0G6 GreA/GreB family elongation factor n=3 Tax=Proteobacteria
           RepID=Q1H0G6_METFK
          Length = 165

 Score = 83.0 bits (204), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 22/102 (21%), Positives = 43/102 (42%), Gaps = 2/102 (1%)

Query: 32  DALNAELDRAQMCSPEEMPH-DVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSV 90
             L   +D A +  P +    + +   + V+  ++         +V   ++      +S 
Sbjct: 65  RFLMKRMDIAVVVDPAQQQDLEKIYFGAWVELYSIDKDSEHHYRIVGQDELDPGKGYISW 124

Query: 91  MAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQPEAAG 132
           ++P+  ALLG + GD I  E P G     E++++ Y P   G
Sbjct: 125 ISPLARALLGKQPGDVIRVETPAGEER-FEIVDVSYHPPGQG 165


>UniRef50_Q8ZJH2 Transcription elongation factor greB n=165 Tax=Proteobacteria
           RepID=GREB_YERPE
          Length = 171

 Score = 83.0 bits (204), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 2/98 (2%)

Query: 31  ADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSV 90
              L   L+  ++  P+      V   + V+  N  + E R+  LV P +   +   +S+
Sbjct: 63  VRFLAKRLEVLKIVDPDPRQEGKVFFGAWVRVENEQE-EQRIFRLVGPDEFDPAKKWISI 121

Query: 91  MAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQP 128
            +PV  AL+G +V D +  + P G AT+  +LE+ Y+P
Sbjct: 122 DSPVARALIGKQVDDEVTVQTPNGEATYW-ILEIRYRP 158


>UniRef50_Q5SKM1 Transcription elongation factor n=5 Tax=Thermus RepID=Q5SKM1_THET8
          Length = 155

 Score = 82.6 bits (203), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 42/106 (39%), Gaps = 4/106 (3%)

Query: 20  LEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPA 79
             +  +        L   L RA +        D V +  +V+      GE     +V   
Sbjct: 52  ARRAMWQNEARIAQLEDLLSRAVIVENGSF--DQVALGCQVELE-TETGERLSLAIVGSH 108

Query: 80  KMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
           +    + ++S  +P+G ALLG +VGD +      G   +  +LE++
Sbjct: 109 EADIFSGKISDESPLGQALLGKKVGDVVEIRGKKGAQVY-TILEIK 153


>UniRef50_A9BFC0 Transcription elongation factor greA n=12 Tax=Thermotogaceae
           RepID=GREA_PETMO
          Length = 159

 Score = 82.6 bits (203), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 20/88 (22%), Positives = 44/88 (50%), Gaps = 1/88 (1%)

Query: 38  LDRAQMCSPEEMPHD-VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGA 96
           LD A++        +  V++  +VK ++      +   LV P +      ++S+ +P+G 
Sbjct: 71  LDNAEIIENGGNHDNSTVSLGKKVKIKDYRLNREQEFVLVTPQEANIEENKISIESPIGR 130

Query: 97  ALLGLRVGDSIHWELPGGVATHLEVLEL 124
           +LLG + G+ I+ +   G +  +E+ E+
Sbjct: 131 SLLGRKKGEVINIKTARGSSKKIEIKEI 158


>UniRef50_B0P8A6 Transcription elongation factor n=1 Tax=Anaerotruncus colihominis
           DSM 17241 RepID=B0P8A6_9FIRM
          Length = 151

 Score = 82.6 bits (203), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 53/116 (45%), Gaps = 7/116 (6%)

Query: 9   NDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDG 68
           ++ D  + +  + +           L  +L   ++   +++  DVV++ SRVK  ++   
Sbjct: 41  SEYDEAKNEQAVVEARIK------KLEDQLKHVKIIERDQISTDVVSVGSRVKILDMDYD 94

Query: 69  EVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
           E  V T+    +  +    +S  +PVG  L+G +VGD +    P      L++LE+
Sbjct: 95  EEMVYTIASSVESHNDLESISDESPVGKGLIGHKVGDVVEIHAPA-AVLKLKILEI 149


>UniRef50_D1B0C0 Transcription elongation factor n=4 Tax=Campylobacteraceae
           RepID=D1B0C0_SULD5
          Length = 167

 Score = 82.6 bits (203), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 31/133 (23%), Positives = 52/133 (39%), Gaps = 10/133 (7%)

Query: 3   RPTIIINDLDAER----IDILLE-QPAYAGLPIADALNAELD----RAQMCSPEEMPHDV 53
           +    + +LD  R    +    E   A   L   D+  AEL     R+Q+  P    HD 
Sbjct: 26  QRPETVIELDIARSHGDLKENAEYHAAKEKLAFIDSRIAELSDLVSRSQVIDPSTYEHDK 85

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           V   S +   NL   E    ++V   +       +S  +P+   L+G  V + +  +LP 
Sbjct: 86  VRFGSTITLENLETNEEVTYSIVGSTESNPDLGLISYHSPLSKQLMGRCVDEEVMIKLPV 145

Query: 114 GVATHLEVLELEY 126
           G   +  +L + Y
Sbjct: 146 GTQEYA-ILNITY 157


>UniRef50_B9XEY1 GreA/GreB family elongation factor n=1 Tax=bacterium Ellin514
           RepID=B9XEY1_9BACT
          Length = 170

 Score = 82.2 bits (202), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 22/95 (23%), Positives = 42/95 (44%), Gaps = 2/95 (2%)

Query: 33  ALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMA 92
            L   L  A++  P   P + V   + V  R+   G      +V   +       +S ++
Sbjct: 78  QLEQSLATAEIVPPPPQPWEQVRFGATVTVRD-ESGNETRYRIVGVDETDIDRDWVSWLS 136

Query: 93  PVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQ 127
           P+  AL+  R+G+ +H+  P G    LE++ + Y+
Sbjct: 137 PIARALINARIGERVHFRFPAGEKQ-LEIVSITYE 170


>UniRef50_C1XQ58 Transcription elongation factor n=2 Tax=Meiothermus
           RepID=C1XQ58_9DEIN
          Length = 159

 Score = 82.2 bits (202), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 43/108 (39%), Gaps = 2/108 (1%)

Query: 20  LEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPA 79
             +  +        L + L RA +          V +   V+      G     T+V   
Sbjct: 54  ARRAQWDNDRRISELESILARAVVVEAGNGTPLEVGLGVSVELE-TDTGARMSLTIVGSH 112

Query: 80  KMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQ 127
           +    N ++S  +P+G  L+G +VGD + +  P GV     ++EL Y+
Sbjct: 113 EADVFNGKISNESPMGQRLMGKKVGDRVEYPSPKGV-QSYTIVELSYK 159


>UniRef50_A6H247 Transcription elongation factor greA n=33 Tax=Bacteroidetes
           RepID=GREA_FLAPJ
          Length = 158

 Score = 82.2 bits (202), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 31/119 (26%), Positives = 48/119 (40%), Gaps = 11/119 (9%)

Query: 18  ILLEQPAYAGLPIADALNAEL---------DRAQMCSPEEMPHDVVTMNSRVKFRNLSDG 68
            L E   Y     A  L  EL           A++    ++      + S VK +N S+G
Sbjct: 42  DLSENAEYDAAKEAQGLL-ELKIKKMEEVYSNARLIDESQLDVSKALVLSHVKIKNQSNG 100

Query: 69  EVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQ 127
                 LV  ++      ++SV +P+G  LLG  VG+     +P G+    EVLE+   
Sbjct: 101 MEMSYHLVAESEADLKTGKISVTSPIGKGLLGKSVGEIAEITVPNGI-LKFEVLEITRD 158


>UniRef50_C1F9R4 Transcription elongation factor GreA n=1 Tax=Acidobacterium
           capsulatum ATCC 51196 RepID=C1F9R4_ACIC5
          Length = 165

 Score = 81.8 bits (201), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 29/107 (27%), Positives = 45/107 (42%), Gaps = 1/107 (0%)

Query: 18  ILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVY 77
            + +Q           L   +    + +   +PHD V   S V+  + S  E     LV 
Sbjct: 44  HMAKQRQEFVNARLGQLKKRMAELSLVNLANIPHDRVAFGSTVEVFDTSKDEKIEYKLVT 103

Query: 78  PAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
             +   S   +S  +P+G AL+G +VGD+     P G    LEVL+L
Sbjct: 104 SEESDVSKGLISTTSPIGRALIGKQVGDTATVVTPSG-NRELEVLKL 149


>UniRef50_Q2S2N3 Transcription elongation factor n=1 Tax=Salinibacter ruber DSM
           13855 RepID=Q2S2N3_SALRD
          Length = 164

 Score = 81.8 bits (201), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 42/92 (45%), Gaps = 1/92 (1%)

Query: 33  ALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMA 92
            +   + RA++     +      + S V   NL  G+ +  TLV   +   S  ++SV +
Sbjct: 72  QIEDTIARARIVDESTVDDSKAYILSDVTVENLDTGDEQTFTLVSEEEANISENKISVDS 131

Query: 93  PVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
           P+G  LL    GD +  ++P G   H ++ ++
Sbjct: 132 PIGEGLLAQEEGDEVSIDVPAGTV-HFKIKDI 162


>UniRef50_C0QME5 GreA2 n=1 Tax=Desulfobacterium autotrophicum HRM2
           RepID=C0QME5_DESAH
          Length = 95

 Score = 81.8 bits (201), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 26/49 (53%), Positives = 35/49 (71%)

Query: 88  LSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQPEAAGDYLL 136
           +S++APVG+ALLGL +GD I W  PGG    + + E+ YQPE +GDY L
Sbjct: 47  ISILAPVGSALLGLSIGDKIEWPKPGGGNLKVRITEIIYQPERSGDYQL 95


>UniRef50_A5V3E1 Transcription elongation factor greA n=13 Tax=Proteobacteria
           RepID=GREA_SPHWW
          Length = 158

 Score = 81.8 bits (201), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 42/92 (45%), Gaps = 2/92 (2%)

Query: 35  NAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPV 94
              L RAQ+  P  +  D +   + V   +  D +     +V   +      ++S  +P+
Sbjct: 68  EDRLSRAQVIDPSMLSGDKIVFGATVTLLD-DDEKPVRYQIVGQTEADAKTGKISYNSPL 126

Query: 95  GAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
           G AL+G +V D +   +P G   +L V ++E+
Sbjct: 127 GRALIGKKVDDEVEVTVPSGDRFYL-VSKIEF 157


>UniRef50_A7HDS3 Transcription elongation factor GreB n=3 Tax=Myxococcales
           RepID=A7HDS3_ANADF
          Length = 169

 Score = 81.8 bits (201), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 2/97 (2%)

Query: 32  DALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVM 91
             L+  +D   +  P   PH      + V   +  +GE R   LV P +   +   +SV 
Sbjct: 71  RFLSERMDALTVVDPRPHPHGRAFFGAWVTIED-DEGEARTFRLVGPDEFDVAAGLISVE 129

Query: 92  APVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQP 128
           AP+G ALLG + GD++ +  P G A  L ++ + + P
Sbjct: 130 APLGRALLGKQEGDTVLFLRPAGEA-ELTIMAVRWSP 165


>UniRef50_C8S319 GreA/GreB family elongation factor n=1 Tax=Rhodobacter sp. SW2
           RepID=C8S319_9RHOB
          Length = 167

 Score = 81.5 bits (200), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 37/118 (31%), Positives = 54/118 (45%), Gaps = 6/118 (5%)

Query: 14  ERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVR 73
           ER+D L E  A   +     L A L  A    P   P   V   +RV+   L+DG  +V 
Sbjct: 55  ERLDKLPEAAAERDIRY---LEARLRSAIPVDPSSQPAGEVAFGARVEVA-LADGSRQVW 110

Query: 74  TLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEY-QPEA 130
            +    +   +  +++  +P+  ALLG  VGD + W  P G    LEVL + Y  P+A
Sbjct: 111 QITGEDEADATQNRIAPQSPLARALLGAEVGDLVIWRKPSG-PVELEVLAIAYADPQA 167


>UniRef50_Q03RN4 Transcription elongation factor n=1 Tax=Lactobacillus brevis ATCC
           367 RepID=Q03RN4_LACBA
          Length = 132

 Score = 81.1 bits (199), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 2/90 (2%)

Query: 35  NAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPV 94
              L  AQ+   ++   D +T+  +V F+   D E    T+V  A+    + ++S  +P+
Sbjct: 44  ERMLQYAQIIDNDDTDKDEITVGKKVTFQ-EDDDEPEEYTIVGAAEADPMSGKISNDSPI 102

Query: 95  GAALLGLRVGDSIHWELPGGVATHLEVLEL 124
              LLG RVG+++ +  PGG    ++V+ +
Sbjct: 103 AKGLLGHRVGETVTFPTPGG-DMTVKVIAV 131


>UniRef50_B4UCU9 Transcription elongation factor greA n=588 Tax=Bacteria
           RepID=GREA_ANASK
          Length = 166

 Score = 81.1 bits (199), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 18/94 (19%), Positives = 39/94 (41%), Gaps = 1/94 (1%)

Query: 33  ALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMA 92
            +   +  A++    +   D V   + V   +   G+     +V   +      ++SV +
Sbjct: 64  QVEHWIASAEVIDVTKHAGDRVVFGATVSLEDAESGDQVTYRIVGELEADLKQGKISVTS 123

Query: 93  PVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
           P+  AL+G   GD++    PGG   + E+  + +
Sbjct: 124 PIARALIGRSEGDTVVVRSPGGEKEY-EIQSVAF 156


>UniRef50_Q1AU03 Transcription elongation factor n=1 Tax=Rubrobacter xylanophilus
           DSM 9941 RepID=Q1AU03_RUBXD
          Length = 154

 Score = 80.3 bits (197), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 2/94 (2%)

Query: 33  ALNAELDRAQMCSP-EEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVM 91
            L   L  A++  P        V + +RV  R + DG  R   +V   +   ++ +LS  
Sbjct: 59  ELQRRLRNAKIVDPASSAEEGAVDLGTRVTLRVVGDGRERTFQIVGANEADPASGKLSHA 118

Query: 92  APVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
           +PVG ALL  RVG+ +    P G   + E++ +E
Sbjct: 119 SPVGKALLRRRVGEKVRVSTPRGATEY-EIVSVE 151


>UniRef50_D2RL35 GreA/GreB family elongation factor n=3 Tax=Veillonellaceae
           RepID=D2RL35_ACIFE
          Length = 172

 Score = 80.3 bits (197), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 20/93 (21%), Positives = 43/93 (46%), Gaps = 3/93 (3%)

Query: 34  LNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNT--QLSVM 91
           L   +  AQ+    ++  +VV++  +VK  ++   +    T+V   +        ++S  
Sbjct: 66  LENMIRNAQIIKDTDITKNVVSLGCKVKIEDMETHDQEEYTVVGTTEADPMAEPPRISNE 125

Query: 92  APVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
           +PVG A+LG +VG  +    P G     +++ +
Sbjct: 126 SPVGKAILGQKVGAVVKVTTPIG-ELDYKIVAV 157


>UniRef50_Q0BR49 Transcription elongation factor greB n=4 Tax=cellular organisms
           RepID=Q0BR49_GRABC
          Length = 169

 Score = 80.3 bits (197), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 27/99 (27%), Positives = 49/99 (49%), Gaps = 3/99 (3%)

Query: 31  ADALNAELDRAQMCSPEEMPH-DVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLS 89
              L   L+ A +  P   PH D +   + V + N +D  V+  T+V   +   +  ++S
Sbjct: 71  VRFLTKRLENAVVIDPATQPHKDRIYFGATVTYINAADETVQ-VTIVGADEADMALGRIS 129

Query: 90  VMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQP 128
           +++PV  ALLG   GD +    P      L++L+++Y+P
Sbjct: 130 LLSPVAKALLGASKGDEVTVITPVKTEI-LDILDVDYRP 167


>UniRef50_A6SZ83 Transcription elongation factor, greA family n=2
           Tax=Oxalobacteraceae RepID=A6SZ83_JANMA
          Length = 139

 Score = 79.9 bits (196), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 49/121 (40%), Gaps = 3/121 (2%)

Query: 7   IINDLDAERIDILLEQPAYAG---LPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFR 63
            +   DA  +  + E     G   +   + L   +  + +   +      VT+ S V + 
Sbjct: 6   YLTQNDAATLSRIAEHLLRMGEVEINAGEQLIDIISTSIILPVDVQRKGYVTLYSTVSYS 65

Query: 64  NLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLE 123
            +   EVR  T+V P         +S + P+G AL+G +   ++   LP      L++L+
Sbjct: 66  PVDTEEVRKLTIVCPQDANPQLALISALTPIGLALIGRKALTTVEVALPSKRVEKLKILD 125

Query: 124 L 124
           +
Sbjct: 126 V 126


>UniRef50_Q1PYP5 Transcription elongation factor n=1 Tax=Candidatus Kuenenia
           stuttgartiensis RepID=Q1PYP5_9BACT
          Length = 741

 Score = 79.9 bits (196), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 19/95 (20%), Positives = 43/95 (45%), Gaps = 2/95 (2%)

Query: 31  ADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSV 90
           A+ L A+L +     P  +  ++V+  ++V  +N         TL+ P         +S 
Sbjct: 645 AERLKADLQKIVFIEPYTVKTNIVSPGTKVTIKNKDKETTETYTLLGPWDADIDKNIISY 704

Query: 91  MAPVGAALLGLRVGDSIHWELPGGVAT--HLEVLE 123
           ++P+G  LL  + G+++  +LP        +++ +
Sbjct: 705 LSPIGKGLLNKKTGETVTIQLPENEIVCDIIKIEK 739


>UniRef50_B1I1G7 GreA/GreB family elongation factor n=1 Tax=Candidatus Desulforudis
           audaxviator MP104C RepID=B1I1G7_DESAP
          Length = 154

 Score = 79.5 bits (195), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 20/99 (20%), Positives = 43/99 (43%), Gaps = 1/99 (1%)

Query: 28  LPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQ 87
               + +   L RA++   +  P  +  +   ++  +L  G   +  +V P ++  +   
Sbjct: 54  DDYLNRVRELLARARVVEGQCPPLPLTLIGCDIRVEDLDRGHSEMFRVVSPYEINPAAGH 113

Query: 88  LSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
           +S ++PVG  LL    G  +  + PGG   +  V+ + Y
Sbjct: 114 VSFLSPVGRGLLLKEPGQVLAVQAPGGTFRY-RVVSVTY 151


>UniRef50_Q1J0L4 Transcription elongation factor n=3 Tax=Deinococcus
           RepID=Q1J0L4_DEIGD
          Length = 156

 Score = 79.5 bits (195), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 33/122 (27%), Positives = 51/122 (41%), Gaps = 6/122 (4%)

Query: 8   INDLDAERIDILLEQPAYAGLPIAD--ALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNL 65
           I D D        E         A    L  +L+RAQ+   +        + ++VK R+ 
Sbjct: 39  IADGDLRESAAYDEARMQQSENEARILELEDQLERAQIIEEDA--SGGAGLGAKVKVRDE 96

Query: 66  SDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
             G  R   LV   ++     ++S  +P+G AL G R G  +  +LP G +   EVLE+ 
Sbjct: 97  K-GNERQFELVGTYEVDVLKGKISDASPIGQALSGKRPGQIVTVQLPKG-SAKFEVLEVT 154

Query: 126 YQ 127
           Y 
Sbjct: 155 YD 156


>UniRef50_Q2GD99 Transcription elongation factor greA n=2 Tax=Neorickettsia
           RepID=GREA_NEOSM
          Length = 159

 Score = 79.1 bits (194), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 52/132 (39%), Gaps = 9/132 (6%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHDVV 54
           +P+++     A  +  L E   Y                L   L  A++    +   + V
Sbjct: 26  KPSVVAAVAQARELGDLSENAEYHEARKEQSFVEGKIRELQLCLSEAEVIDVSQFTGERV 85

Query: 55  TMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGG 114
              + V   N+    V +  +V   +      ++SV +P+G A++   VG+ +  +LP G
Sbjct: 86  KFGASVTLENMESKSVLIYQIVGNLESDIKEGKISVSSPIGKAVMNKEVGEIVEIDLPSG 145

Query: 115 VATHLEVLELEY 126
                ++L +E+
Sbjct: 146 -KKTYKILGVEF 156


>UniRef50_Q848L1 GreA n=1 Tax=uncultured bacterium RepID=Q848L1_9BACT
          Length = 597

 Score = 79.1 bits (194), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 29/123 (23%), Positives = 46/123 (37%), Gaps = 11/123 (8%)

Query: 13  AERIDILLEQPAYAGLPIADA--LNAELDR-------AQMCSPEEMPHDVVTMNSRVKFR 63
            +R D LL  P       ++   L  EL +       A +      P D V   + V   
Sbjct: 476 VQRRDELLASPDDDLPERSELATLERELAQVSAVLQGAIVIRLASPPRDEVRFGAEVVVE 535

Query: 64  NLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLE 123
           +   G      LV   +       ++  +P+G AL G R+G  + W  P G   ++ V E
Sbjct: 536 D-DRGSRSRFQLVGENEAAPERGLVNWFSPLGRALAGARLGQRVEWTTPAGRGAYV-VRE 593

Query: 124 LEY 126
           + Y
Sbjct: 594 ISY 596


>UniRef50_Q096W9 Transcription elongation factor GreB n=1 Tax=Stigmatella aurantiaca
           DW4/3-1 RepID=Q096W9_STIAU
          Length = 144

 Score = 78.8 bits (193), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 3/96 (3%)

Query: 32  DALNAELDRAQMCSP-EEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSV 90
             L   LD A + +P E+     V   + V   +   G      +V   ++     ++SV
Sbjct: 50  RFLQKRLDTATIVTPAEQTDQGRVYFGATVTLEDED-GVQTTYQIVGSDEIDTQGGRISV 108

Query: 91  MAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
            +P+G ALL   VGDS+    P G    L ++ + Y
Sbjct: 109 ESPIGKALLRKAVGDSVEVMRPRG-EIELTIVAIAY 143


>UniRef50_B5Y9H5 Transcription elongation factor n=1 Tax=Coprothermobacter
           proteolyticus DSM 5265 RepID=B5Y9H5_COPPD
          Length = 163

 Score = 78.8 bits (193), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 53/118 (44%), Gaps = 9/118 (7%)

Query: 16  IDILLEQPAYAGLPIADALNAE----LD----RAQMCSPEEMPHDVVTMNSRVKFRNLSD 67
           +  L E   +       AL  E    L+     A++   E++  D V++ ++V   + S 
Sbjct: 43  LGDLSENSEFEAAKEEQALLEERIARLETLVYNARVVKAEDLALDQVSVGTKVLVLDESA 102

Query: 68  GEVRVRTLVY-PAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
           G      +V    ++   + ++S  +P+G+ LLG + GD +  +L  G     E+L++
Sbjct: 103 GREESFIIVGNSEEVDPFSGKISSKSPLGSRLLGRKRGDRVEIKLRNGSKAVYEILDI 160


>UniRef50_A5D4X0 Putative uncharacterized protein n=1 Tax=Pelotomaculum
           thermopropionicum SI RepID=A5D4X0_PELTS
          Length = 150

 Score = 78.8 bits (193), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 1/97 (1%)

Query: 29  PIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQL 88
                L+  +  A      +     VT+ S V+ +NLS+ EV    +V P         +
Sbjct: 49  NYIQRLDRLIRNASKSKIADNKVPFVTIGSEVEIQNLSEQEVYKYFIVNPFYSEVREGHI 108

Query: 89  SVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
           S ++PVG +LL  +VGD +  + PGGV  + ++  + 
Sbjct: 109 SFLSPVGKSLLLKKVGDEVEVKAPGGVFRY-KIKSIR 144


>UniRef50_Q4K5S3 Transcription elongation factor GreB n=3 Tax=Pseudomonas
           RepID=Q4K5S3_PSEF5
          Length = 197

 Score = 78.0 bits (191), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 30/116 (25%), Positives = 50/116 (43%), Gaps = 11/116 (9%)

Query: 10  DLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGE 69
           D D +R+  L     Y            L  AQ+ +      D V + SRV F +  D +
Sbjct: 91  DADKQRMAELERDLRYFTQR--------LHSAQVVTTAN-STDKVQIGSRVTFADEQDRQ 141

Query: 70  VRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
                LV   +   +   ++  +P+G ALLG + GD + W+ P G    +E++ +E
Sbjct: 142 Q-SVQLVGEDQADAAKGLINWASPLGRALLGAQPGDEVLWQRPAGNQL-IEIIRIE 195


>UniRef50_C7N7T1 Transcription elongation factor n=1 Tax=Slackia heliotrinireducens
           DSM 20476 RepID=C7N7T1_SLAHD
          Length = 155

 Score = 78.0 bits (191), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 3/89 (3%)

Query: 38  LDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAA 97
           L  A +    +   + VT+ S V       G  RV T+V  A+   +  ++S  +PVG+ 
Sbjct: 70  LANATVVEAPK-RSNRVTVGSTVTV--DMGGRERVFTIVGGAEANAAEGKISNDSPVGSV 126

Query: 98  LLGLRVGDSIHWELPGGVATHLEVLELEY 126
           LLG + GD +  E P G    + VL +E+
Sbjct: 127 LLGSKKGDQLTTEGPTGRKIEITVLNIEH 155


>UniRef50_Q88DU7 Transcription elongation factor greA n=83 Tax=Proteobacteria
           RepID=GREA_PSEPK
          Length = 160

 Score = 77.6 bits (190), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 20/93 (21%), Positives = 39/93 (41%), Gaps = 2/93 (2%)

Query: 35  NAELDRAQMCSPEEMPHD-VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAP 93
              L  + +     +PH   V   + V   N    E     +V   +      +LS  AP
Sbjct: 68  EGRLQNSVVIDVTTIPHTGKVIFGTTVVLANTETDEEVTYQIVGEDEADVKQGKLSSGAP 127

Query: 94  VGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
           +  A++G   GD++  + P G   + E++E+++
Sbjct: 128 IARAIIGKEEGDTVVVKTPSGTVEY-EIVEVKH 159


>UniRef50_B2V1C0 Transcription elongation factor n=28 Tax=Clostridium
           RepID=B2V1C0_CLOBA
          Length = 155

 Score = 77.2 bits (189), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 23/93 (24%), Positives = 47/93 (50%), Gaps = 1/93 (1%)

Query: 34  LNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAP 93
           L   +  A +    E+    + +NS+ + + + D +  V TLV    +   N  +S+ + 
Sbjct: 64  LMTMISTATVIDDTEIDKSSLGINSKARIKFVEDDDEDVITLVTTMDLDPENMLISIESD 123

Query: 94  VGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
           +G AL+G + G+++  E P G    +++LE+ Y
Sbjct: 124 LGKALMGKKAGETVEVEAP-GAKYTVKILEILY 155


>UniRef50_B1H062 Transcription elongation factor n=1 Tax=uncultured Termite group 1
           bacterium phylotype Rs-D17 RepID=B1H062_UNCTG
          Length = 158

 Score = 77.2 bits (189), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 21/96 (21%), Positives = 45/96 (46%), Gaps = 3/96 (3%)

Query: 33  ALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMA 92
            L +++  A++   + +  D V +   V  ++   G      +V   +      ++S+ +
Sbjct: 63  ELTSKIACAKIIEEQNIDSDKVFIGVTVTIKDEY-GADYQYAIVDLEEADPVANRISIQS 121

Query: 93  PVGAALLGLRVGDSIHWELPGGVATHLEVLEL-EYQ 127
           P+   LLG   G+++  ELP G  T  ++L++  YQ
Sbjct: 122 PLAQGLLGHTAGETVAVELPAG-KTKFKILKISRYQ 156


>UniRef50_D0WJ76 Transcription elongation factor n=1 Tax=Slackia exigua ATCC 700122
           RepID=D0WJ76_9ACTN
          Length = 161

 Score = 77.2 bits (189), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 3/89 (3%)

Query: 38  LDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAA 97
           L  A +    +   + V + S V       G  RV T+V  A+   S+ ++S  +PVGAA
Sbjct: 76  LSNAVLVEAPK-RSNRVNIGSTVTV--DMGGRERVFTIVGAAEADVSSGKISNESPVGAA 132

Query: 98  LLGLRVGDSIHWELPGGVATHLEVLELEY 126
           LLG + GD    E P G    ++++++E+
Sbjct: 133 LLGGKKGDHFTAEGPTGRVIEMDIVKIEH 161


>UniRef50_Q1CX76 Transcription elongation factor, GreA/GreB family n=2
           Tax=Cystobacterineae RepID=Q1CX76_MYXXD
          Length = 167

 Score = 76.8 bits (188), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 2/94 (2%)

Query: 33  ALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMA 92
            L A L+  ++  P+      V   + V+  +   G VR   +V P +      +LSV +
Sbjct: 73  ELAAVLEDVRVVEPDASQAGRVFFGAWVELEDEDGGPVR-YRIVGPDESDVKAGRLSVES 131

Query: 93  PVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
           P+  ALLG  VG+S+  + P G   +  V  ++Y
Sbjct: 132 PLARALLGKEVGESVVVDRPRGPVEY-TVTAVDY 164


>UniRef50_B2KBD2 GreA/GreB family elongation factor n=1 Tax=Elusimicrobium minutum
           Pei191 RepID=B2KBD2_ELUMP
          Length = 156

 Score = 76.8 bits (188), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 1/94 (1%)

Query: 34  LNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAP 93
           L  +L  AQ+    ++      + + V   ++S       TLV   +       LSV +P
Sbjct: 64  LEQKLRNAQITDDIQVDKSEARIGATVTVHDISADIDFTYTLVGSMESNPEKGLLSVQSP 123

Query: 94  VGAALLGLRVGDSIHWELPGGVATHLEVLELEYQ 127
           +  ++LG + G+     LP G   + ++++LEY+
Sbjct: 124 LAVSILGKKEGEEFEAVLPKGKKMY-KLVKLEYK 156


>UniRef50_Q4A759 Transcription elongation factor greA n=4 Tax=Mycoplasma
           RepID=GREA_MYCH7
          Length = 160

 Score = 76.8 bits (188), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 19/93 (20%), Positives = 43/93 (46%), Gaps = 3/93 (3%)

Query: 32  DALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVM 91
             L   + +A++    ++    V++ S+V   N+  GE++   +V         +++S  
Sbjct: 68  RELETIISKAKIIKA-DLGSSRVSIGSKVSLENVESGEIQTFQIVSSIDADPFKSKISNF 126

Query: 92  APVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
           +P+  ALLG   GD +  ++       + +LE+
Sbjct: 127 SPIAQALLGQHQGDEVEVDV--NEKYSVRILEV 157


>UniRef50_B9L0L0 Transcription elongation factor greA n=1 Tax=Thermomicrobium roseum
           DSM 5159 RepID=GREA_THERP
          Length = 156

 Score = 76.1 bits (186), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 4/95 (4%)

Query: 32  DALNAELDRAQMCS-PEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSV 90
             +   L R ++   P +    VV + S V      DGE+   T+V   +   S  ++S 
Sbjct: 65  REIEELLKRVELIEQPTDGDRSVVRVGSTVTIEI--DGEIETYTIVGAIEAKPSAGRISN 122

Query: 91  MAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
            +PVG ALLG R G+ +  E P G      ++E++
Sbjct: 123 ESPVGRALLGHRAGEIVPIETPNGTLM-ARIIEVQ 156


>UniRef50_C4Z9L9 Transcription elongation factor n=3 Tax=Firmicutes
           RepID=C4Z9L9_EUBR3
          Length = 185

 Score = 76.1 bits (186), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 24/98 (24%), Positives = 47/98 (47%), Gaps = 1/98 (1%)

Query: 32  DALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVM 91
           + +   L  A++   EE+  D +++  +++  +    E     +V   +      ++S  
Sbjct: 88  EEIEKILKNAEVVVEEEVDLDKISIGCKIRILDCEFDEELEYKIVGSTEANSLKGKISNE 147

Query: 92  APVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQPE 129
           +PVG ALLG +VGD++  E   G     +VLE++   E
Sbjct: 148 SPVGKALLGKKVGDTVTVETQVG-ELTYKVLEIQRAEE 184


>UniRef50_A2RGA4 Transcription elongation factor greA n=111 Tax=Firmicutes
           RepID=GREA_STRPG
          Length = 160

 Score = 75.7 bits (185), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 41/92 (44%), Gaps = 1/92 (1%)

Query: 34  LNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAP 93
           L  ++  A++   + +  D V +   V  + +   +     +V  A     + ++S  +P
Sbjct: 67  LETKIRYAEIIDSDAVAKDEVAIGKTVIVQEVGTTDKDTYHIVGAAGADIFSGKISNESP 126

Query: 94  VGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
           +  AL+G + GD +  E P      +E++ +E
Sbjct: 127 IAQALIGKKTGDKVRIESPA-ATYDVEIISVE 157


>UniRef50_Q5SJG6 Anti-cleavage anti-GreA transcription factor Gfh1 n=6
           Tax=Thermaceae RepID=Q5SJG6_THET8
          Length = 156

 Score = 75.7 bits (185), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 31/118 (26%), Positives = 52/118 (44%), Gaps = 6/118 (5%)

Query: 10  DLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGE 69
           D D   ++   +Q         D+L   L RA +        +V+ + S V+  +   GE
Sbjct: 42  DYDDSGLEA-AKQEKARIEARIDSLEDILSRAVILEEG--SGEVIGLGSVVELEDPLSGE 98

Query: 70  VRVRTLVYPAKMTDSNT--QLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
                +V PA+    +T  ++S  +P+G ALLG RVGD +  + P G      V+ + 
Sbjct: 99  RLSVQVVSPAEANVLDTPMKISDASPMGKALLGHRVGDVLSLDTPKGR-REFRVVAIH 155


>UniRef50_B2S1W7 Transcription elongation factor greA n=6 Tax=Treponema
           RepID=GREA_TREPS
          Length = 162

 Score = 75.7 bits (185), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 46/96 (47%), Gaps = 1/96 (1%)

Query: 29  PIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQL 88
            +   L  E++RAQ+  P  +    V+  + +  +N + GE    T++ P +       +
Sbjct: 63  NMVTRLQEEIERAQVFDPTTVVAGRVSFGTVISLKNHTSGEDETYTILGPWESAPERGII 122

Query: 89  SVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
           S M+P+G+ LL  + G+ + + + G      E+L +
Sbjct: 123 SYMSPLGSNLLNRKTGEQLAFTV-GEHEKVYEILSI 157


>UniRef50_D1C6T4 Transcription elongation factor n=1 Tax=Sphaerobacter thermophilus
           DSM 20745 RepID=D1C6T4_SPHTD
          Length = 157

 Score = 75.7 bits (185), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 23/95 (24%), Positives = 39/95 (41%), Gaps = 4/95 (4%)

Query: 32  DALNAELDRAQMCSPEEM-PHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSV 90
             +   L RA++          VV + S V      DG     T+V   +   +  ++S 
Sbjct: 65  REIEDILRRAEVIDEAPNGDARVVRLGSTVTIEI--DGAQETYTIVGAVEAKPAAGRISN 122

Query: 91  MAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
            +P G ALLG R G+ +  + P     H  ++ +E
Sbjct: 123 ESPFGRALLGHREGEEVEIQTPA-AVLHARIVNVE 156


>UniRef50_C6X3W9 Transcription elongation factor GreB n=1 Tax=Flavobacteriaceae
           bacterium 3519-10 RepID=C6X3W9_FLAB3
          Length = 183

 Score = 75.7 bits (185), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 21/93 (22%), Positives = 41/93 (44%), Gaps = 1/93 (1%)

Query: 34  LNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAP 93
           LN  +  A++     +    V   + V F+NL++   +   LV   +   S  +L+   P
Sbjct: 92  LNGRMASAKIIDTARLSQGEVHFGATVTFKNLNNNLRQTFQLVGVDEANISKGKLAFTTP 151

Query: 94  VGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
           +  AL+  +VG+ +  +L        E+L + Y
Sbjct: 152 LAKALINSKVGEKVTLQLGDKTNI-FEILSIGY 183


>UniRef50_D1CDC6 Transcription elongation factor n=1 Tax=Thermobaculum terrenum ATCC
           BAA-798 RepID=D1CDC6_THET1
          Length = 159

 Score = 75.3 bits (184), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 6/96 (6%)

Query: 33  ALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNT---QLS 89
            L   L  A++      P   V + S+V      +G     T+V  A+         ++S
Sbjct: 67  ELEKLLANAEVIDRSAQPAGTVGLGSKVTVE--ENGRTYTYTIVDGAEAGRGRDGEVRIS 124

Query: 90  VMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
             + VG+ALLG RVGDS+  E+P G     ++L +E
Sbjct: 125 SKSAVGSALLGRRVGDSVEVEVPAG-KLTFKILSVE 159


>UniRef50_D0J5N8 Kelongation factor GreB n=4 Tax=Proteobacteria RepID=D0J5N8_COMTE
          Length = 231

 Score = 75.3 bits (184), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 4/99 (4%)

Query: 32  DALNAELDRAQMCSPE-EMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSV 90
             L   L+ A++  P      D V   + V + +  +G  R  T++   +   +  Q+S 
Sbjct: 131 RFLTKRLEIAEVVDPAVHAGSDQVFFGATVSYVD-DEGVERTITIMGIDEADSAQNQVSW 189

Query: 91  MAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEY-QP 128
           +APV  ALL  RVGD +    P GV   LE+L++ Y QP
Sbjct: 190 IAPVSRALLKARVGDEVALPTPAGV-RMLEILDVSYPQP 227


>UniRef50_D2QK34 GreA/GreB family elongation factor n=1 Tax=Spirosoma linguale DSM
           74 RepID=D2QK34_9SPHI
          Length = 171

 Score = 75.3 bits (184), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 2/95 (2%)

Query: 33  ALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGE-VRVRTLVYPAKMTDSNTQLSVM 91
           ALN  +  A++ + ++ P D V   + V   + S G+  +  T+V   +    + +++  
Sbjct: 76  ALNQRIATAKVVNMQDHPLDEVRFGATVTLSSQSTGKADQQLTIVGVDEADAIHGRIAFP 135

Query: 92  APVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
           AP+   LLG +VGD I    P G    LE+  + Y
Sbjct: 136 APIARLLLGKKVGDFITLRTPRGENA-LEITSIYY 169


>UniRef50_A6NPJ1 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus
           ATCC 29799 RepID=A6NPJ1_9BACE
          Length = 197

 Score = 74.9 bits (183), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 45/106 (42%), Gaps = 1/106 (0%)

Query: 20  LEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPA 79
            +Q           L   +  A + S +  P D V +  +V      D E     +V   
Sbjct: 80  AKQEKNRNESRIRFLENMIRTAVVISDQAAP-DTVGLYDKVTVYLEEDDETETYQVVTTM 138

Query: 80  KMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
           +    + ++S  +PVG+ALLG RVGD I+ ++      ++ +  +E
Sbjct: 139 RQDALHGRISKESPVGSALLGKRVGDRIYIQVNDNYGYYVVIKAIE 184


>UniRef50_B4UMG4 GreA/GreB family elongation factor n=4 Tax=Anaeromyxobacter
           RepID=B4UMG4_ANASK
          Length = 169

 Score = 74.9 bits (183), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 37/117 (31%), Positives = 48/117 (41%), Gaps = 5/117 (4%)

Query: 12  DAERIDILLEQPAYAGLPIAD--ALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGE 69
           DA R+    E+PA  G   A   AL+A L    +  PE  P   V   + V       G 
Sbjct: 52  DAARLPD-AERPARLGELDARIAALDATLGALTVLGPEATPEGQVGFGTWVTVEEED-GR 109

Query: 70  VRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
                LV P +       +S  +PV  ALLG R GD +    PGG A  L V+ +  
Sbjct: 110 RVTWRLVGPDEADARRGLISAGSPVARALLGRRAGDVVEVNRPGGEA-ELTVVAVRR 165


>UniRef50_Q9HZY5 Transcription elongation factor greB n=13 Tax=Gammaproteobacteria
           RepID=GREB_PSEAE
          Length = 168

 Score = 74.5 bits (182), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 22/98 (22%), Positives = 40/98 (40%), Gaps = 2/98 (2%)

Query: 31  ADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSV 90
              L   L+  ++        + V   + V   +   GE     +V P ++   N Q+S+
Sbjct: 71  VRFLRKRLENLKVVGERPADPNRVYFGAWVTLEDED-GEQARYRIVGPDELDLRNNQISI 129

Query: 91  MAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQP 128
            +P+  AL+G  +   +    P G      V+E+EY P
Sbjct: 130 DSPLARALVGKELDAEVLVRTPAGEKLWF-VVEIEYPP 166


>UniRef50_Q88Q22 Transcription elongation factor, putative n=11 Tax=Pseudomonas
           RepID=Q88Q22_PSEPK
          Length = 165

 Score = 74.5 bits (182), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 3/86 (3%)

Query: 40  RAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALL 99
            AQ+       H  V + SRV+F + +  + +V  LV   +    +  ++  +P+G ALL
Sbjct: 80  SAQVVPAAT-SHSKVQIGSRVRFVD-AQDQEQVVQLVGEDEADAGHGLINWGSPLGRALL 137

Query: 100 GLRVGDSIHWELPGGVATHLEVLELE 125
           G   GD + W  P G    +EV+E+ 
Sbjct: 138 GAGPGDEVVWRRPVGEQV-IEVVEIL 162


>UniRef50_UPI0001746B72 nucleoside diphosphate kinase regulator protein, putative n=1
           Tax=Verrucomicrobium spinosum DSM 4136
           RepID=UPI0001746B72
          Length = 137

 Score = 73.0 bits (178), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 51/126 (40%), Gaps = 7/126 (5%)

Query: 8   INDLDAERIDILLEQPAYAGLPIADA---LNAELDRAQMC-SPEEMPHDVVTMNSRVKFR 63
           I+  D   +   L+         A     L   L  A++     +    V  + + V+  
Sbjct: 9   ISQSDLHTLRTFLDHDDAFNPLDARERSLLIERLQDAKVFEDESDDEPSVAGLQTLVRVE 68

Query: 64  NLSD--GEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           +LS    +    TLV P +    + Q+S+++P+GAA+ G   G  +  + P G    L V
Sbjct: 69  DLSTSPPDQFDFTLVLPHEANFEDDQISILSPLGAAVFGRSAGTQVVMDSPTGT-RRLLV 127

Query: 122 LELEYQ 127
           L +  +
Sbjct: 128 LAVFRK 133


>UniRef50_A6NZ08 Transcription elongation factor n=1 Tax=Bacteroides capillosus ATCC
           29799 RepID=A6NZ08_9BACE
          Length = 157

 Score = 73.0 bits (178), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 1/87 (1%)

Query: 38  LDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAA 97
           L+   +   E      V + S++K  ++   E     +V   +    N ++S  +P G A
Sbjct: 70  LENCVVIEEEIHDGKTVRLGSKLKVLDVEFNEELDYEVVGSQEADPMNGRISEDSPFGRA 129

Query: 98  LLGLRVGDSIHWELPGGVATHLEVLEL 124
           LLG  VG+ +  E P G A H +VL +
Sbjct: 130 LLGKSVGEDVVVEAPAG-ALHYKVLSI 155


>UniRef50_B5ZLJ0 Transcription elongation factor GreB n=5 Tax=Proteobacteria
           RepID=B5ZLJ0_GLUDA
          Length = 180

 Score = 73.0 bits (178), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 3/102 (2%)

Query: 31  ADALNAELDRAQMCSPE-EMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLS 89
              L   +++A +  P  +   D V   + V +    D   R   +V   +   +  Q+S
Sbjct: 79  VRFLTRRIEKAIVVDPAAQTRRDRVFFGATVTYVTEDD-TERTVVIVGVDESDLAAGQVS 137

Query: 90  VMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQPEAA 131
           + +PV  ALLG RVGD +    P G    +E+L + Y   A 
Sbjct: 138 LASPVARALLGGRVGDEVRLLTPAGAEM-IEILRIAYPAPAE 178


>UniRef50_Q98Q16 Transcription elongation factor greA n=3 Tax=Mycoplasma
           RepID=GREA_MYCPU
          Length = 157

 Score = 73.0 bits (178), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 44/116 (37%), Gaps = 10/116 (8%)

Query: 9   NDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDG 68
            + DA R     E+       I + L   L  A          D + + S V+  N S G
Sbjct: 49  AEYDAAR-----EKQGQIEDRITE-LENILSNAISIQESH--SDKIGLGSVVRILNQSTG 100

Query: 69  EVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
           + R   +V       +  ++S  +P+  +++G   GD +  + P       ++L +
Sbjct: 101 KERTFKIVGSFDTDPTQNKISYESPLAKSIIGFSKGDVVEIDAPD--KYTTKILSV 154


>UniRef50_B9XT30 GreA/GreB family elongation factor n=1 Tax=bacterium Ellin514
           RepID=B9XT30_9BACT
          Length = 606

 Score = 73.0 bits (178), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 40/92 (43%), Gaps = 1/92 (1%)

Query: 33  ALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMA 92
            L +EL RA+         D V++ + VK  +L+   +    ++           +S +A
Sbjct: 510 ELESELVRARGTDYLNPKTDAVSIGTIVKVTDLNSSHIEHFNILGAWDSDPEKNVISYLA 569

Query: 93  PVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
           P+  +LL  + G+ + +E+  G      + E+
Sbjct: 570 PLAQSLLNRKPGEEVDYEM-DGQKRRFRIDEI 600


>UniRef50_A4E9C2 Transcription elongation factor n=1 Tax=Collinsella aerofaciens
           ATCC 25986 RepID=A4E9C2_9ACTN
          Length = 156

 Score = 72.6 bits (177), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 29/118 (24%), Positives = 51/118 (43%), Gaps = 9/118 (7%)

Query: 9   NDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDG 68
           ++ DA +     ++ A     IA+ + A L  AQ+          V++ S V   +  +G
Sbjct: 48  SEYDAAK-----DKQAQNAARIAE-IQAILANAQV--AATTGDLTVSIGSTVSLID-PNG 98

Query: 69  EVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
           EV   TLV   +      ++S  +PVG A++G   GDS+    P G      + ++  
Sbjct: 99  EVMEVTLVGTTETNSLEHKISNESPVGHAIIGHGEGDSVEVVTPSGKTRVYTIAKIAR 156


>UniRef50_Q8P7P8 Transcription elongation factor greB n=53 Tax=Proteobacteria
           RepID=GREB_XANCP
          Length = 168

 Score = 72.2 bits (176), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 22/93 (23%), Positives = 40/93 (43%), Gaps = 1/93 (1%)

Query: 34  LNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAP 93
           L+  L+  ++          V   ++V+  +   GE+    +V P +       +S+ +P
Sbjct: 74  LSKRLEALRVVDTAPTDPQAVFFGAQVELEDADSGELLRYRIVGPDETDAGRGWISIDSP 133

Query: 94  VGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
           +  ALL  RV D    +LP G      V+ +EY
Sbjct: 134 LARALLKKRVDDEFEAQLPSG-KHTFVVVVVEY 165


>UniRef50_A6W1U9 Transcription elongation factor GreB n=17 Tax=Gammaproteobacteria
           RepID=A6W1U9_MARMS
          Length = 196

 Score = 72.2 bits (176), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 21/93 (22%), Positives = 43/93 (46%), Gaps = 2/93 (2%)

Query: 34  LNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAP 93
           L   L+   +        + V   + V   + + G ++   +V P ++   ++ +S+ +P
Sbjct: 101 LEKRLEVCTVVDRFPSDQERVFFGAWVTLEDEA-GNLKEYRIVGPDELDHHSSYISIDSP 159

Query: 94  VGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
           V  ALL  + GD +   L GG  T++ +  +EY
Sbjct: 160 VARALLKKQEGDEVVIRLAGGEKTYI-IDAVEY 191


>UniRef50_Q2Y7V5 GreA/GreB family elongation factor n=33 Tax=cellular organisms
           RepID=Q2Y7V5_NITMU
          Length = 213

 Score = 71.8 bits (175), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 6/99 (6%)

Query: 32  DALNAELDRAQMCSPEEMPHD---VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQL 88
             L   LD A++  P  MP +    +   + V + N   GE ++ ++V   ++  +   +
Sbjct: 91  RFLTRRLDMAEIIDPS-MPREDESRIFFGATVTYINEK-GEEKIVSIVGVNEIDTTRGYI 148

Query: 89  SVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQ 127
           S ++P+   LL  R GD +    PGG    LE+LE+ YQ
Sbjct: 149 SWVSPLARTLLKAREGDVVTLHAPGGTE-ELEILEVRYQ 186


>UniRef50_A0LES5 GreA/GreB family elongation factor n=1 Tax=Syntrophobacter
           fumaroxidans MPOB RepID=A0LES5_SYNFM
          Length = 155

 Score = 71.8 bits (175), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 22/91 (24%), Positives = 40/91 (43%), Gaps = 1/91 (1%)

Query: 34  LNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAP 93
           L  +L   ++    +         + V  +N+  GE +   LV P +    + +LS+ +P
Sbjct: 64  LERKLASCEIVVGRKFFFKQAEFGTIVVIQNIETGETQRYQLVGPYESNVVDGKLSIDSP 123

Query: 94  VGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
           VG  L+G R G+ +    P GV     V+ +
Sbjct: 124 VGRHLVGRREGEEVLVYTPAGV-RMYRVVSI 153


>UniRef50_A6X2G5 GreA/GreB family elongation factor n=2 Tax=Ochrobactrum
           RepID=A6X2G5_OCHA4
          Length = 156

 Score = 71.4 bits (174), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 54/126 (42%), Gaps = 11/126 (8%)

Query: 6   IIINDLDAERIDI-LLEQPAYAGLPIADALNAEL-------DRAQMCSPEEMP-HDVVTM 56
           + + + +  R+   L +            ++ +L       + A++  P  +P  DVV  
Sbjct: 33  LTMIEDEIARLQRELADANVAGERSAIARISRDLRYWTTRRENAELSVP--VPDSDVVRF 90

Query: 57  NSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVA 116
              V+  NL DG+VR  T+V   +   SN ++S +APV   L G  VGD +         
Sbjct: 91  GMTVELENLDDGKVRRWTIVGEDEADPSNGKISHVAPVAILLFGKPVGDVVKINNVEWEI 150

Query: 117 THLEVL 122
             L+++
Sbjct: 151 VSLKIV 156


>UniRef50_Q1QUF3 GreA/GreB family elongation factor n=1 Tax=Chromohalobacter
           salexigens DSM 3043 RepID=Q1QUF3_CHRSD
          Length = 178

 Score = 71.4 bits (174), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 6/99 (6%)

Query: 34  LNAELDRAQMCSPEEMPHDV--VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVM 91
           L   LD  Q+     +P D   V   + V   +  DGE     +V   +       +SV 
Sbjct: 84  LGKRLDELQVVD--RLPADTSRVYFGAYVTLED-DDGEEMTIRIVGHDETDTDKRWISVD 140

Query: 92  APVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQPEA 130
           AP+  A+LG  + + +    PGG  T++ + ++ Y PEA
Sbjct: 141 APLAQAMLGKGLDEDVTVNAPGGDTTYI-ITDIAYDPEA 178


>UniRef50_B3DVF3 Transcription elongation factor GreA fused to uncharacterized
           associated domain n=1 Tax=Methylacidiphilum infernorum
           V4 RepID=B3DVF3_METI4
          Length = 614

 Score = 71.4 bits (174), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 38/92 (41%)

Query: 33  ALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMA 92
            L + + RA+      +    V + + V + +L         ++       S   +S +A
Sbjct: 513 ELESMISRARATDFSNVDTTTVNIGTVVSYTDLKTNRTNSVAILGAWDSNPSKGIISYLA 572

Query: 93  PVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
             G +LLG + GD +   L  G+ T + + ++
Sbjct: 573 AFGQSLLGHKTGDVLQVSLEDGITTEIRIDKI 604


>UniRef50_B4D5K0 GreA/GreB family elongation factor n=1 Tax=Chthoniobacter flavus
           Ellin428 RepID=B4D5K0_9BACT
          Length = 169

 Score = 71.1 bits (173), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 20/93 (21%), Positives = 43/93 (46%), Gaps = 2/93 (2%)

Query: 33  ALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMA 92
           AL+  L  A++ +  E   D V     V  R+ + G      +V   ++      +S ++
Sbjct: 76  ALSQRLADAEVIAISESRGDEVRFGMFVTIRD-AGGVEDEYRIVGVDEVDLEAGWISWLS 134

Query: 93  PVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
           P+  A++G ++GD + ++ P G    L ++ + 
Sbjct: 135 PLAQAIVGRKIGDVVQFQAPAG-EKKLHIVAVR 166


>UniRef50_A5CVW9 Transcription elongation factor greA n=4 Tax=Gammaproteobacteria
           RepID=GREA_VESOH
          Length = 159

 Score = 71.1 bits (173), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 21/96 (21%), Positives = 42/96 (43%), Gaps = 4/96 (4%)

Query: 33  ALNAELDRAQMCSPEEMPHD--VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSV 90
            +  +L R Q+    ++  D   V   + +   N  D       +V   +   S  ++S 
Sbjct: 64  EIELKLSRMQIIDVTKLSQDGRCV-FGTTITLMNSVDNSEITYQIVGEDEADISLDKISC 122

Query: 91  MAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
            +P+ +AL+G   GD +  + P G   + ++L +EY
Sbjct: 123 HSPIASALMGNEEGDKVIVKAPKGDIVY-KILSVEY 157


>UniRef50_A5VME9 Transcription elongation factor GreA n=49 Tax=Lactobacillaceae
           RepID=A5VME9_LACRD
          Length = 165

 Score = 70.7 bits (172), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 43/92 (46%), Gaps = 3/92 (3%)

Query: 34  LNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAP 93
           LN +L  A++ +P+      + + + V      D E     +V   +   +  ++S  +P
Sbjct: 76  LNKQLQYAEIVTPKN--DHTIDLGTTVTIEFEDDHEQETYHIVGKQEADLAKQKISFDSP 133

Query: 94  VGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
           +G A+L    G ++  E P   +  ++++++E
Sbjct: 134 LGQAILHQTAGTTVTVEAPQS-SYKVKIVKVE 164


>UniRef50_B9E669 Transcription elongation factor n=5 Tax=Clostridium
           RepID=B9E669_CLOK1
          Length = 157

 Score = 70.3 bits (171), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/93 (27%), Positives = 40/93 (43%), Gaps = 2/93 (2%)

Query: 33  ALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMA 92
            L  +L  A +     +  DV  +N     +     EV   TLV   +    N ++S+ +
Sbjct: 67  ELEYQLKNAVIIESS-LETDVFDINRTALVKFYDVDEVEEVTLVSSVESDVKNMRISIES 125

Query: 93  PVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
           P+G AL  L+VGD      P G    +EV +L 
Sbjct: 126 PLGKALFRLKVGDKATVISPDG-NYDVEVEKLL 157


>UniRef50_C6B1R3 GreA/GreB family elongation factor n=16 Tax=cellular organisms
           RepID=C6B1R3_RHILS
          Length = 160

 Score = 70.3 bits (171), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/111 (27%), Positives = 47/111 (42%), Gaps = 9/111 (8%)

Query: 16  IDILLEQPAYAGLPIADA--LNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVR 73
           I+ + E+   A  P+ D   L A L  AQ+  P     D V   S V FR   DG V+  
Sbjct: 56  IEDVNERRRQAASPLRDLRYLTARLRTAQLM-PSPTSIDTVAFGSTVTFR-RDDGRVQTY 113

Query: 74  TLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
            +V   +       +S ++PV   L+G  VGD +           LE++ +
Sbjct: 114 RIVGEDEADPKAGSISYVSPVARLLMGKAVGDMVE-----TGGQELEIIAI 159


>UniRef50_Q930S1 Putative uncharacterized protein n=1 Tax=Sinorhizobium meliloti
           RepID=Q930S1_RHIME
          Length = 183

 Score = 70.3 bits (171), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/134 (26%), Positives = 60/134 (44%), Gaps = 7/134 (5%)

Query: 1   MSRPTII-INDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSR 59
           MSR     +   D   +  +L++  +        L  +L+ A +   E++P +VVT++++
Sbjct: 11  MSREAFCQLTAGDLNILMSMLDETGHTE-SFTILLREKLNYASVFFREDIPENVVTLDTQ 69

Query: 60  VKFRNLSDGEVRV--RTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVAT 117
           V +       VR     LV  A    +N+ +SV    G ALLGL VG+        G   
Sbjct: 70  VGYTV---NGVRTGPHLLVRNAAGRPANSAISVRTMRGLALLGLAVGERTEILGEDGWPE 126

Query: 118 HLEVLELEYQPEAA 131
            L V  + +QPE+ 
Sbjct: 127 TLAVERIVFQPESE 140


>UniRef50_Q7VM42 Transcription elongation factor greB n=27 Tax=Proteobacteria
           RepID=GREB_HAEDU
          Length = 162

 Score = 70.3 bits (171), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 50/133 (37%), Gaps = 10/133 (7%)

Query: 3   RPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMPHDVV 54
           RP +  +  +A  +    E   Y                L+  L+  Q+          V
Sbjct: 27  RPKVTQSVSEAAALGDRSENAEYIYGKRRLREIDRRIRFLSKRLEALQIIDYHPQQAGKV 86

Query: 55  TMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGG 114
              + ++  N ++GE+    +V   +   +   +S+ +PV  AL+G  V D I  + P G
Sbjct: 87  FFGAWIELEN-NEGEINQYRIVGCDEFDPTKNWISIDSPVARALIGKCVDDEIEVQTPTG 145

Query: 115 VATHLEVLELEYQ 127
            A    + ++ Y 
Sbjct: 146 KAVFY-INKIWYD 157


>UniRef50_C8W826 Transcription elongation factor n=7 Tax=Coriobacteriaceae
           RepID=C8W826_ATOPD
          Length = 159

 Score = 70.3 bits (171), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 18/116 (15%), Positives = 43/116 (37%), Gaps = 7/116 (6%)

Query: 9   NDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDG 68
           ++ DA + +              + +   L  A++          V + + V+  +   G
Sbjct: 49  SEYDAAKEEQ------SHNESRINEIRQILSVAKVVEGGSKRKVTVAIGTTVELADAK-G 101

Query: 69  EVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
           +     +V   +      ++S  +P G AL+G + GD + +  P G      ++ +
Sbjct: 102 KTTKYVIVGTTETNSLEHKISNESPAGEALIGHKKGDEVEFTTPNGKVKKYTIISI 157


>UniRef50_A5IYH4 Transcription elongation factor greA n=3 Tax=Mycoplasma
           RepID=GREA_MYCAP
          Length = 163

 Score = 69.9 bits (170), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 54/119 (45%), Gaps = 9/119 (7%)

Query: 9   NDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDG 68
            + DA R     ++ +     I + L   L+ A++   +    +   + + V++ N+   
Sbjct: 51  AEYDAAR-----DRQSEVERRILE-LERILENAEIIDTKSAVQNKAGIGATVRYLNMKTN 104

Query: 69  EVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLR-VGDSIHWELPGGVATHLEVLELEY 126
           +  V T++ P        ++S  +PV  A++    +GD +  E+P     +++VL++ Y
Sbjct: 105 KELVVTIMGPHDSNPIENKISNESPVAQAIMEANGIGDVVEVEVP--QKYNIKVLDISY 161


>UniRef50_O51157 Transcription elongation factor greA n=23 Tax=Borrelia
           RepID=GREA_BORBU
          Length = 901

 Score = 69.5 bits (169), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 18/97 (18%), Positives = 45/97 (46%), Gaps = 2/97 (2%)

Query: 32  DALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVM 91
           ++L  E++ A++   +++   VV   ++V   N   G+     ++ P +       +S  
Sbjct: 804 NSLMLEIENAKVIDTKDLQSSVVGFGTKVVILNEVTGKDESYLILGPWESNPDEGIISYK 863

Query: 92  APVGAALLGLRVGDSIHWELPGGVATHL--EVLELEY 126
           +P G  LL  R GDS+++ +      +   ++  +++
Sbjct: 864 SPFGENLLDSREGDSLNFVINNTNFKYFVKKIEPIKF 900


>UniRef50_C5BTE2 Transcription elongation factor GreA n=1 Tax=Teredinibacter
           turnerae T7901 RepID=C5BTE2_TERTT
          Length = 126

 Score = 69.5 bits (169), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 37/108 (34%)

Query: 17  DILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLV 76
             L    +      A  L   L  A +   +++    V   S V   ++ + E +   +V
Sbjct: 15  RELEANLSSLPDTDAAELRTRLASATVVDNDDIMGGRVQFGSLVTVFSIDEEEEQSFQIV 74

Query: 77  YPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
              +       L   +P+  AL G R G+ +   L  G     EV  +
Sbjct: 75  SSDESLSGRGLLDQRSPLAQALFGAREGEVVRVLLQNGSNCDYEVTHI 122


>UniRef50_Q04UP0 Transcription elongation factor n=6 Tax=Leptospira
           RepID=Q04UP0_LEPBJ
          Length = 927

 Score = 69.5 bits (169), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 1/92 (1%)

Query: 33  ALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMA 92
            L AE+  A +     +  D + +    K +N S GEV   +++           +S  +
Sbjct: 827 RLEAEIKSAIILDLTNVKTDKINIGVTAKLKNESTGEVVAYSILGAWDADTEKHIISYQS 886

Query: 93  PVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
           P+  +LLG +VGD+    L  G  T   VLE+
Sbjct: 887 PLAKSLLGKKVGDAAVLNL-TGAETRYTVLEI 917


>UniRef50_B1XUH7 Transcription elongation factor GreB n=2 Tax=Polynucleobacter
           necessarius RepID=B1XUH7_POLNS
          Length = 168

 Score = 69.5 bits (169), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 47/103 (45%), Gaps = 9/103 (8%)

Query: 32  DALNAELDRAQMCS-----PEEMPHDVVTMNSRVKFRNLS---DGEVRVRTLVYPAKMTD 83
             LN  L+ A +         E   D V   + V +  L     G+    T+V   ++  
Sbjct: 64  RFLNKRLEFAIVVDNSARKSGENDADQVFFGASVTYSALEGPEAGKRTSITIVGVDEVDL 123

Query: 84  SNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
             + +S ++P+  AL+  R+GD +  + P G  T +E+L+++Y
Sbjct: 124 DKSHVSWVSPIAKALIKSRIGDCVFIQTPTG-PTEIEILDVQY 165


>UniRef50_Q88ZS9 Transcription elongation factor greA 1 n=7 Tax=Lactobacillus
           RepID=GREA1_LACPL
          Length = 156

 Score = 69.1 bits (168), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 45/118 (38%), Gaps = 14/118 (11%)

Query: 9   NDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDG 68
              D  R++  L             LN +L  AQ+  P +  +D + +   V    L D 
Sbjct: 52  AKRDLGRLESRL-----------RYLNKQLQYAQIVQPAD--NDQLDIGKFVTIEFLDDH 98

Query: 69  EVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
           +     LV   +      ++S  +P+G AL    V D +    P G    ++V+ ++ 
Sbjct: 99  DQITYQLVGKQEANLEQQKISFTSPIGQALANHTVDDVVTVNAPNGAYQ-VKVIAVKR 155


>UniRef50_UPI0001C31C12 transcription elongation factor GreA n=1 Tax=Conexibacter woesei
           DSM 14684 RepID=UPI0001C31C12
          Length = 154

 Score = 69.1 bits (168), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 4/92 (4%)

Query: 33  ALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMA 92
            L      A +        D+V   S V+    + G+    TLV  A+ +  + +LS+ +
Sbjct: 65  KLRERERNATVTEASS-DVDIVAFGSTVEVE--TGGKNARYTLVGAAEASARDGKLSIES 121

Query: 93  PVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
           PV  AL+G R G+ +  + P G A  L V+ +
Sbjct: 122 PVARALIGARAGEDVQVQTPSG-ARILRVVRV 152


>UniRef50_UPI00017427C8 transcription elongation factor GreA n=1 Tax=candidate division TM7
           single-cell isolate TM7a RepID=UPI00017427C8
          Length = 151

 Score = 68.7 bits (167), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 50/117 (42%), Gaps = 11/117 (9%)

Query: 9   NDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDG 68
            + DA R +  + +   A +         L  A + +        V + S V+   ++  
Sbjct: 46  AEYDAAREEQGIVETRIAEIENI------LQNAAIITGGV--SGQVGLGSVVEL--MTGS 95

Query: 69  EVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
           +  V T+V P +      ++S  +P+GAAL+G +V D +    P G     +++ ++
Sbjct: 96  KTAVYTVVGPVEADPLEGKVSNESPIGAALMGKKVDDIVEINTPKG-KLEYKIISIK 151


>UniRef50_B9KMW2 Transcription elongation factor n=3 Tax=Rhodobacter sphaeroides
           RepID=B9KMW2_RHOSK
          Length = 164

 Score = 68.7 bits (167), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 29/116 (25%), Positives = 49/116 (42%), Gaps = 6/116 (5%)

Query: 14  ERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVR 73
           +R+D L E  A   +     L A +  A +  P   P D V     V   + + G   V 
Sbjct: 55  DRLDRLPEAAAERDIRY---LEARIASAILVDPAAQPLDEVAFGLAVTVEDEA-GRRTVW 110

Query: 74  TLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQPE 129
            +    +   +  +++  AP+  AL+G R+G+ + W  P G    L V  + + PE
Sbjct: 111 EITGEDEAQATARRIAPQAPLARALMGARLGEKVVWTRPAG-EVTLTVTGIAH-PE 164


>UniRef50_A7VBG3 Putative uncharacterized protein n=1 Tax=Clostridium sp. L2-50
           RepID=A7VBG3_9CLOT
          Length = 195

 Score = 68.7 bits (167), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 1/91 (1%)

Query: 34  LNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAP 93
           L+  +  A++   E    D V +N+ V+     D E     +V   +    N  +S ++P
Sbjct: 94  LDRMVRTAEIIKDESA-DDEVGLNNTVRVYFEEDEEEDTYRIVTTVREDVLNGIISNISP 152

Query: 94  VGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
           +G ALLG +VGD +      G   H+ + E+
Sbjct: 153 MGKALLGHKVGDRVEVVPGKGDPFHIVIREI 183


>UniRef50_B9J7D6 Transcription elongation factor protein n=52
           Tax=Alphaproteobacteria RepID=B9J7D6_AGRRK
          Length = 160

 Score = 68.4 bits (166), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 28/111 (25%), Positives = 45/111 (40%), Gaps = 9/111 (8%)

Query: 16  IDILLEQPAYAGLPIADA--LNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVR 73
           I+ + E+   A  P+ D   L   +  AQ   P     D+V   S V F +  DG V+  
Sbjct: 56  IEDVNERRRQAAGPLRDLRYLAERIRTAQPI-PAPASIDIVAFGSTVTF-SRDDGRVQTY 113

Query: 74  TLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
            +V   +       +S ++PV   L+G  VGD             LE++ +
Sbjct: 114 RIVGEDEADPKTGSISFVSPVAKLLMGKSVGDVASV-----GDQELEIIAI 159


>UniRef50_B1ZZX3 GreA/GreB family elongation factor n=3 Tax=Verrucomicrobia
           RepID=B1ZZX3_OPITP
          Length = 616

 Score = 68.4 bits (166), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 21/93 (22%), Positives = 41/93 (44%), Gaps = 1/93 (1%)

Query: 34  LNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAP 93
           L  +L RA++   ++   D V++ + V+  ++ DG     T++           +S   P
Sbjct: 519 LERDLGRARISDFKDASIDQVSVGTVVEVASVKDGHHTTYTVLGAWDGDPEKHFISYKTP 578

Query: 94  VGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
            GAALLG + GD I+ +          ++ +  
Sbjct: 579 FGAALLGKKTGDVINVKT-DASDEDYAIVSIAR 610


>UniRef50_B1ZQE9 GreA/GreB family elongation factor n=1 Tax=Opitutus terrae PB90-1
           RepID=B1ZQE9_OPITP
          Length = 166

 Score = 68.0 bits (165), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 24/95 (25%), Positives = 39/95 (41%), Gaps = 2/95 (2%)

Query: 31  ADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSV 90
           A  L   L  A++ S       +V   ++V  +    G      +V   +       +S 
Sbjct: 74  ARELQQILATAEIISSPAPDRSIVRFGAKVTVKEED-GTTSTYRIVGIDETEFYTGGISF 132

Query: 91  MAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
            +P+  ALLG  VGD I ++ P G    LE+  +E
Sbjct: 133 QSPLAQALLGASVGDRIQFQSPAG-PRQLEIQLIE 166


>UniRef50_C1CW74 Putative transcription elongation factor n=1 Tax=Deinococcus
           deserti VCD115 RepID=C1CW74_DEIDV
          Length = 162

 Score = 68.0 bits (165), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 3/89 (3%)

Query: 33  ALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNT---QLS 89
            L   L RA +   E++P   V + S V   +   G      LV   +++       Q+S
Sbjct: 66  ELEDVLARAVIVEEEDLPRGQVAVGSVVMLEDDKHGRQLQVQLVSAVEISAMTEGVTQVS 125

Query: 90  VMAPVGAALLGLRVGDSIHWELPGGVATH 118
             +PVG AL+G R G++   EL  G   +
Sbjct: 126 DDSPVGKALMGRREGETFDVELEAGRVQY 154


>UniRef50_B7CAB2 Transcription elongation factor n=5 Tax=Erysipelotrichaceae
           RepID=B7CAB2_9FIRM
          Length = 162

 Score = 68.0 bits (165), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 50/122 (40%), Gaps = 12/122 (9%)

Query: 9   NDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEE-----MPHDVVTMNSRVKFR 63
            D DA R     E  A     I + L A +  A++ +           +VV + S VK  
Sbjct: 48  ADYDAAR-----EHQAQVEGRIRE-LEAMIKNAEIITESADVEDKKKKNVVKLGSTVKIL 101

Query: 64  NLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLE 123
           +LSD +     +V   +    N +LS   P+   ++  +VGD    +        +++LE
Sbjct: 102 DLSDNQEVTFNIVGTIEADPFNGKLSNTTPLAEVIMDHKVGDVCTVK-RVEEPYDVKILE 160

Query: 124 LE 125
           ++
Sbjct: 161 IK 162


>UniRef50_Q2N9J5 Transcription elongation factor n=2 Tax=Erythrobacter
           RepID=Q2N9J5_ERYLH
          Length = 159

 Score = 66.8 bits (162), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 25/94 (26%), Positives = 39/94 (41%), Gaps = 3/94 (3%)

Query: 34  LNAELDRAQMCSPEEMP-HDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMA 92
           L   +  A++  P E P  D     + +   +  D   +  TLV   +   S  ++   +
Sbjct: 67  LARRMKHARVIEPSEQPDKDRAFFGATLTLADEDD-ARKTVTLVGDDEQDASAGKIGWSS 125

Query: 93  PVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
           P+  AL G RVGD     LP G     EV+ + Y
Sbjct: 126 PLARALRGARVGDLRTVHLPSG-EREWEVMAIAY 158


>UniRef50_Q9JVD0 Transcription elongation factor greB n=64 Tax=Bacteria
           RepID=GREB_NEIMA
          Length = 163

 Score = 66.4 bits (161), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 23/96 (23%), Positives = 41/96 (42%), Gaps = 3/96 (3%)

Query: 32  DALNAELDRAQMCSPE-EMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSV 90
             L   L+ A +  PE     D V   + V      DG  +   +V   ++  +  ++S 
Sbjct: 66  RFLTKRLEAAVVVDPELREATDQVFFGATVGLL-RGDGREQTVKIVGIDEIDTAQNKISW 124

Query: 91  MAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
           ++P+   L+  R GD +    P G    +E+L +EY
Sbjct: 125 ISPLARCLIKAREGDEVVLNTPEGRE-EIEILSVEY 159


>UniRef50_B6BTF1 GreA/GreB family elongation factor n=2 Tax=Betaproteobacteria
           RepID=B6BTF1_9PROT
          Length = 164

 Score = 66.4 bits (161), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 24/127 (18%), Positives = 49/127 (38%), Gaps = 8/127 (6%)

Query: 5   TIIINDLDAERIDILLEQPAYAG--LPIADALNAELDR---AQMCSPEEMPHDVVTMNSR 59
           TI + + + + I  L + P      + +   L   L R   A +    E  ++ V   + 
Sbjct: 41  TIHLIETEIKSIKELEDSPENKQNKMKLERDLRYYLKRFETAILIDKHE-ENNKVLFGAH 99

Query: 60  VKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHL 119
           V   +  + E     +V   +      +LS ++P+   L+G  +GD + W+   G     
Sbjct: 100 VILID-ENDEAYKFQIVGEDEADIKQNKLSYVSPLAKELIGSLIGDEVVWKRADGNRVVF 158

Query: 120 EVLELEY 126
            +  + Y
Sbjct: 159 -IDSINY 164


>UniRef50_D1R523 Putative uncharacterized protein n=1 Tax=Parachlamydia
           acanthamoebae str. Hall's coccus RepID=D1R523_9CHLA
          Length = 731

 Score = 66.4 bits (161), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 17/88 (19%), Positives = 40/88 (45%), Gaps = 1/88 (1%)

Query: 33  ALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMA 92
            L+ +L+RA++ + +++  + V++ S V+  +     V   T++ P         LS  +
Sbjct: 640 RLSEQLNRARIITKDDIYLNQVSVGSIVELEDPEKN-VVTYTILGPWDADADTNILSFQS 698

Query: 93  PVGAALLGLRVGDSIHWELPGGVATHLE 120
               A+LG +VG+   +         ++
Sbjct: 699 KFAEAMLGRKVGEEFEFRNQNFTIRTIK 726


>UniRef50_UPI0001746370 transcript cleavage factor/unknown domain fusion protein n=1
           Tax=Verrucomicrobium spinosum DSM 4136
           RepID=UPI0001746370
          Length = 627

 Score = 66.4 bits (161), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 21/100 (21%), Positives = 43/100 (43%), Gaps = 3/100 (3%)

Query: 35  NAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPV 94
             EL RA+      +  + V + + V  +++  G+   +T++         + LS ++ +
Sbjct: 524 ERELRRARGTDFVGVSTETVGIGTIVDLQDVGTGKTETQTILGAWDGDPDQSILSYLSEM 583

Query: 95  GAALLGLRVGDSIHWELPGGVATHLEVLEL---EYQPEAA 131
             AL+G RVGD             ++++ +     Q EAA
Sbjct: 584 AKALIGKRVGDEAELPTDTHGTRKVKIVSIRPYRTQAEAA 623


>UniRef50_B4RDE4 Transcription elongation factor GreA/GreB, family n=1
           Tax=Phenylobacterium zucineum HLK1 RepID=B4RDE4_PHEZH
          Length = 161

 Score = 66.4 bits (161), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 3/87 (3%)

Query: 39  DRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAAL 98
             AQ+        D V   +RV FR    G      LV   +   +  +LS +AP+  A+
Sbjct: 72  ANAQVVE-SPADPDEVAFGTRVTFR-KDGGAPETVELVGEDEAEPAQGRLSWVAPLARAM 129

Query: 99  LGLRVGDSIHWELPGGVATHLEVLELE 125
           +G   G+++  E     A  LE+L +E
Sbjct: 130 IGAMPGETVELETRT-PAIRLEILAVE 155


>UniRef50_A6STV7 Transcription elongation factor GreB n=2 Tax=Oxalobacteraceae
           RepID=A6STV7_JANMA
          Length = 175

 Score = 66.4 bits (161), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 44/94 (46%), Gaps = 3/94 (3%)

Query: 34  LNAELDRAQMCSPE-EMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMA 92
           L   ++ A++         D +   + V + N + GE    T+V   ++  +  ++S ++
Sbjct: 80  LQTRVESAEVVDASVHADGDRIFFGASVDYEN-TAGETHTATIVGLDELDPAQGRISWLS 138

Query: 93  PVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
           P+  +LLG   GD++  + P G    L VL + Y
Sbjct: 139 PLAQSLLGAEEGDTVLLQTPAG-PEELHVLTVRY 171


>UniRef50_B0VIH5 Putative transcription elongation factor n=1 Tax=Candidatus
           Cloacamonas acidaminovorans RepID=B0VIH5_9BACT
          Length = 159

 Score = 65.7 bits (159), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 22/102 (21%), Positives = 45/102 (44%), Gaps = 5/102 (4%)

Query: 28  LPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSN-- 85
               D L       ++    E P D+V   +     +++  E     LV P ++   N  
Sbjct: 59  DNEIDYLRRRSANLKVIDTSEFPKDMVRFGTYCVAEDINTKECICYHLVGPEELNYYNEE 118

Query: 86  --TQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
              ++S+++P+G ALL  ++G+    + P G    L++ E++
Sbjct: 119 GIQEVSIVSPIGKALLSKKIGEIAIVKAPIG-ERKLKIREIK 159


>UniRef50_B3PM73 Transcription elongation factor greA n=1 Tax=Mycoplasma arthritidis
           158L3-1 RepID=GREA_MYCA5
          Length = 159

 Score = 65.7 bits (159), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 21/117 (17%), Positives = 43/117 (36%), Gaps = 9/117 (7%)

Query: 9   NDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPH-DVVTMNSRVKFRNLSD 67
            + DA R                  +   LD  ++   +      VV + S V   +L D
Sbjct: 50  AEYDAAR------DKQATIENEITEIQHILDNYEIIKTQTNRQVSVVRIGSNVSVVSLKD 103

Query: 68  GEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
             V    +V        N ++S  +P+  A++G + G+ +  E P      ++++ +
Sbjct: 104 DTVINFQIVGALDTDPFNGKISNTSPLAKAVIGRKAGEVVEVEAPN--KYQVKIVHV 158


>UniRef50_UPI0000E87FB5 transcription elongation factor GreB n=1 Tax=Methylophilales
           bacterium HTCC2181 RepID=UPI0000E87FB5
          Length = 144

 Score = 65.3 bits (158), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 18/95 (18%), Positives = 41/95 (43%), Gaps = 2/95 (2%)

Query: 33  ALNAELDRAQMCSPEE-MPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVM 91
            L   ++ A +  P   +    V   + VK  +          +V   ++  +   +S +
Sbjct: 51  FLLTAIEDADIVHPSTSIDKKKVYFGANVKLLDEQSKSTLDIRIVGAHEINHNIGNISWL 110

Query: 92  APVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
           +P+  AL+G    D I  + P  + T++ +L+++Y
Sbjct: 111 SPLAKALIGRTSSDLIEVQTPMNIKTYI-ILKVDY 144


>UniRef50_C1ABM5 Transcription elongation factor GreA n=1 Tax=Gemmatimonas
           aurantiaca T-27 RepID=C1ABM5_GEMAT
          Length = 161

 Score = 65.3 bits (158), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 38/82 (46%), Gaps = 1/82 (1%)

Query: 44  CSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRV 103
               ++P D V + S+V   +L         LV+       +  +++ +P+G AL G  V
Sbjct: 70  IDITQIPGDRVGLGSKVIVEDLQSKARETYELVFGDAGELHDGHVTMGSPIGRALQGKSV 129

Query: 104 GDSIHWELPGGVATHLEVLELE 125
           G+    +LP      L+++EL+
Sbjct: 130 GEEAILKLPT-RIRKLQIVELQ 150


>UniRef50_Q1IXC6 GreA/GreB family elongation factor n=1 Tax=Deinococcus geothermalis
           DSM 11300 RepID=Q1IXC6_DEIGD
          Length = 158

 Score = 65.3 bits (158), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 31/117 (26%), Positives = 45/117 (38%), Gaps = 7/117 (5%)

Query: 9   NDLDAERIDILLEQPAYAGLPIADA----LNAELDRAQMCSPEEMPHDVVTMNSRVKFRN 64
              DA  ++    Q A   LP  +A    L   L RA +    +     V + S V  R+
Sbjct: 36  TLDDAMDLEDRSFQAAQYDLPTMEARILELEDVLARAVIVEEPQARDGGVALGSVVVLRD 95

Query: 65  LSDGEVRVRTLVYPAKMTDSNT---QLSVMAPVGAALLGLRVGDSIHWELPGGVATH 118
                     LV   ++        Q+S  +PVG ALLG R G+S   +L    A +
Sbjct: 96  EQHDRELRVQLVSAVEVDALAEGATQVSEDSPVGKALLGRRAGESFEVDLGSSRARY 152


>UniRef50_C0ZE34 Putative uncharacterized protein n=1 Tax=Brevibacillus brevis NBRC
           100599 RepID=C0ZE34_BREBN
          Length = 164

 Score = 64.9 bits (157), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 56  MNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGV 115
           + S VK     D      T+VYP  +   N ++S ++P+G  LL     DS+  E P G 
Sbjct: 86  LGSSVKVLFEEDQFEESFTVVYPTDIDPDNNRISFLSPIGRQLLLAAPHDSVVLESPVGR 145

Query: 116 ATHLEVLELEY 126
              ++V E+ +
Sbjct: 146 QQ-VQVREISF 155


>UniRef50_B1AIU2 Transcription elongation factor greA n=28 Tax=Ureaplasma
           RepID=GREA_UREP2
          Length = 156

 Score = 64.9 bits (157), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 44/129 (34%), Gaps = 9/129 (6%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLPIA--------DALNAELDRAQMCSPEEMPHDVVT 55
           P I     DA     L E   Y              D +   L+  ++        D V+
Sbjct: 27  PAITKQLQDAREQGDLSENADYDAAKNEQAALKKRKDEIEEILENYELIEDVLRSTDEVS 86

Query: 56  MNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGV 115
           + S ++  N       V TLV          ++S+  P+G AL+  + G  +        
Sbjct: 87  IGSTIEIYNYQKDCEEVITLVGSMDSDPFANKISIDTPLGKALVKQKKGTEVTVHTLAS- 145

Query: 116 ATHLEVLEL 124
              ++++++
Sbjct: 146 PYKVKIIKI 154


>UniRef50_P47524 Transcription elongation factor greA n=4 Tax=Mycoplasma
           RepID=GREA_MYCGE
          Length = 161

 Score = 64.5 bits (156), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 40/92 (43%), Gaps = 9/92 (9%)

Query: 38  LDRAQMCSPEEMPHDV--VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVG 95
           L  A++ S  +    V  V++ S V+  + S       T+V   +      ++S  +P+ 
Sbjct: 71  LANAKLISDHQAKTKVTKVSLGSTVEIYDYSSKSNEKYTIVGTLEANPEEHKISNESPLA 130

Query: 96  AALLGLRVGDSIH---WELPGGVATHLEVLEL 124
            A+ G  +GD       E+P      +++L++
Sbjct: 131 LAIYGRLIGDECDVVGIEVP----YRVKILKI 158


>UniRef50_Q6MF39 Putative uncharacterized protein n=1 Tax=Candidatus Protochlamydia
           amoebophila UWE25 RepID=Q6MF39_PARUW
          Length = 723

 Score = 64.5 bits (156), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 43/92 (46%), Gaps = 6/92 (6%)

Query: 34  LNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAP 93
           L+ +  RA++ +P+++  D V + S +   + S G+    +++ P         LS+ + 
Sbjct: 633 LSEQFGRARIITPDDILTDEVGIGSVIDLID-SQGQKIRYSILGPWDADPEKNILSLNSK 691

Query: 94  VGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
              A++G ++GD   ++         +VL L 
Sbjct: 692 FAQAMIGKKIGDQFQFK-----DETFKVLSLH 718


>UniRef50_A2SJD8 Transcription elongation factor n=50 Tax=Proteobacteria
           RepID=A2SJD8_METPP
          Length = 213

 Score = 64.1 bits (155), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 3/101 (2%)

Query: 32  DALNAELDRAQMCSPE-EMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSV 90
             L   L+ A++  P      D V   + V +    DG  R  T+    +  +   ++S 
Sbjct: 115 RFLTKRLEIAEVADPSVHRGSDQVFFGATVTYA-APDGVERTITIKGIDEADNLQAEVSW 173

Query: 91  MAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQPEAA 131
           ++PV  ALL  RVGD +    P G    +EV+E+ Y P  A
Sbjct: 174 ISPVARALLKARVGDEVTLLTPQG-PQTIEVIEVRYPPRPA 213


>UniRef50_A9NGN4 Transcription elongation factor greA n=7 Tax=Acholeplasmataceae
           RepID=GREA_ACHLI
          Length = 158

 Score = 64.1 bits (155), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 21/118 (17%), Positives = 43/118 (36%), Gaps = 11/118 (9%)

Query: 9   NDLDAERIDILLEQPAYAGLPIADALNAE--LDRAQMCSPEEMPHDVVTMNSRVKFRNLS 66
            D DA R               A  L  E  L   ++    +     V +  +V    + 
Sbjct: 49  ADYDAAR--------NEQARIEARILEIESILKNVKIIRTND-DSTTVNIGKKVLLHFVE 99

Query: 67  DGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
             +     +V   +    N ++S+ +P+G A+ G  VGD +  +      +++E+  +
Sbjct: 100 KNKDVEYHVVGTIEADPKNFKISIESPLGRAIKGKEVGDLVQIKSATNKQSNVEIKAI 157


>UniRef50_C7T958 Transcription elongation factor n=4 Tax=Lactobacillus rhamnosus
           RepID=C7T958_LACRG
          Length = 165

 Score = 64.1 bits (155), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 23/99 (23%), Positives = 45/99 (45%), Gaps = 5/99 (5%)

Query: 34  LNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAP 93
           L+  +  A++ +P     ++  + + V      D +     LV PA+      +L++ +P
Sbjct: 65  LDKLIRYAKVTTPAA--ANLADIGNWVTLEFDDDQDEDTYELVGPAEAGMGAAKLAINSP 122

Query: 94  VGAALLGLRVGDSIHWELPGGVATHLEVLELEYQPEAAG 132
           +GAA+    VGD++    P G    + V+ +   P A G
Sbjct: 123 LGAAVRRHHVGDTVTVTAPSGTYQ-VTVMAIS--PHAPG 158


>UniRef50_Q2G8D8 GreA/GreB family elongation factor n=4 Tax=cellular organisms
           RepID=Q2G8D8_NOVAD
          Length = 182

 Score = 63.7 bits (154), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/99 (27%), Positives = 41/99 (41%), Gaps = 4/99 (4%)

Query: 33  ALNAELDRAQMCSPEEM-PHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVM 91
            L   +  +++  P        V   + V+  +  D   +V TLV   +   S   +   
Sbjct: 87  FLARRMKASRVVDPARQEDRSRVLFGATVEIADEDDN-RKVLTLVGDDEQDASKGLIGWS 145

Query: 92  APVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQPEA 130
           AP+  AL G RVGD     LP G     E++ + Y PEA
Sbjct: 146 APIAKALRGSRVGDLRIVRLPSG-QKEWEIMAISY-PEA 182


>UniRef50_C4ZAT8 Transcription elongation factor GreA n=21 Tax=Firmicutes
           RepID=C4ZAT8_EUBR3
          Length = 167

 Score = 63.0 bits (152), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 20/92 (21%), Positives = 40/92 (43%), Gaps = 1/92 (1%)

Query: 34  LNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAP 93
           L   +  A + S E    D V M + V      D E     +V   +       +S  +P
Sbjct: 64  LEKMIKTAVVISDES-KDDEVGMFNTVDVYFEDDDETETYKIVTTVRGNSLKNLISKESP 122

Query: 94  VGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
           +GAA+ G +VGD    ++    +  +++++++
Sbjct: 123 LGAAIFGHKVGDRCEVKVNDDYSYFVKIMKIQ 154


>UniRef50_Q1IZY0 GreA/GreB family elongation factor n=4 Tax=Deinococci
           RepID=Q1IZY0_DEIGD
          Length = 162

 Score = 62.6 bits (151), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 21/98 (21%), Positives = 38/98 (38%), Gaps = 4/98 (4%)

Query: 32  DALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNT---QL 88
           + L   L RA +    E     V + + V   N +  +     +V   + T       ++
Sbjct: 66  EELEDTLARATLIEDHE-NAGRVELGAVVTLNNETTKQTMRVQVVSAPEATVLGGSLPRI 124

Query: 89  SVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
           S  +PVG  L+G +  ++    L  G      V ++EY
Sbjct: 125 SEESPVGRQLMGRKKDETFVVNLENGKQVKYRVQDIEY 162


Searching..................................................done


Results from round 3


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

UniRef50_Q2LTP9 Transcription elongation factor n=2 Tax=Deltapro...   167   8e-41
UniRef50_C5S652 GreA/GreB family elongation factor n=2 Tax=Prote...   166   2e-40
UniRef50_P0AFW6 Regulator of nucleoside diphosphate kinase n=155...   160   1e-38
UniRef50_Q3BX42 Regulator of nucleoside diphosphate kinase n=9 T...   158   4e-38
UniRef50_A6VVR5 GreA/GreB family elongation factor n=15 Tax=Prot...   158   8e-38
UniRef50_B5EI69 GreA/GreB family elongation factor n=6 Tax=Desul...   154   5e-37
UniRef50_A0LL17 GreA/GreB family elongation factor n=3 Tax=Bacte...   153   2e-36
UniRef50_B8GS58 GreA/GreB family elongation factor n=22 Tax=Prot...   153   2e-36
UniRef50_Q6MQZ8 Regulator of nucleoside diphosphate kinase n=1 T...   153   2e-36
UniRef50_Q1H3Z9 GreA/GreB family elongation factor n=1 Tax=Methy...   146   2e-34
UniRef50_Q11P04 Transcription elongation factor n=1 Tax=Cytophag...   145   4e-34
UniRef50_C6RP41 GreA/GreB family elongation factor n=4 Tax=Acine...   143   2e-33
UniRef50_B0SEQ9 Transcription elongation factor n=2 Tax=Leptospi...   141   8e-33
UniRef50_A4XNX9 GreA/GreB family elongation factor n=16 Tax=Bact...   140   1e-32
UniRef50_Q7MD62 Transcription elongation factor n=10 Tax=Proteob...   140   1e-32
UniRef50_B9MBQ3 GreA/GreB family elongation factor n=6 Tax=Betap...   140   2e-32
UniRef50_B9NGJ6 Predicted protein n=12 Tax=cellular organisms Re...   139   2e-32
UniRef50_A9GAI2 Regulator of nucleoside diphosphate kinase n=1 T...   139   3e-32
UniRef50_B5JTX6 Transcription elongation factor n=1 Tax=gamma pr...   138   4e-32
UniRef50_Q13WN5 GreA/GreB family elongation factor n=50 Tax=Burk...   137   9e-32
UniRef50_B8G0E1 GreA/GreB family elongation factor n=2 Tax=Desul...   137   9e-32
UniRef50_Q3K4S3 Regulator of nucleoside diphosphate kinase n=2 T...   134   7e-31
UniRef50_A9MBQ4 GreA/GreB family elongation factor n=36 Tax=Bruc...   134   8e-31
UniRef50_C9P6Y2 Regulator of nucleoside diphosphate kinase n=1 T...   133   2e-30
UniRef50_Q3SMM4 GreA/GreB family elongation factor n=1 Tax=Thiob...   133   2e-30
UniRef50_B2SQJ5 Regulator of nucleoside diphosphate kinase n=8 T...   133   2e-30
UniRef50_C6X5Q8 Transcription elongation factor n=1 Tax=Flavobac...   132   3e-30
UniRef50_Q4KB20 Acetyltransferase, GNAT family family n=9 Tax=Ba...   132   3e-30
UniRef50_A6C278 Nucleoside diphosphate kinase regulator protein,...   132   3e-30
UniRef50_Q74EX3 Nucleoside diphosphate kinase regulator protein,...   132   3e-30
UniRef50_A6X582 GreA/GreB family elongation factor n=3 Tax=Rhizo...   132   4e-30
UniRef50_C0N448 Putative uncharacterized protein n=1 Tax=Methylo...   131   6e-30
UniRef50_C3X2V3 GreA/GreB family elongation factor n=2 Tax=Oxalo...   131   6e-30
UniRef50_A5F052 Regulator of nucleoside diphosphate kinase n=31 ...   130   1e-29
UniRef50_D1SYS0 GreA/GreB family elongation factor n=1 Tax=Acido...   129   3e-29
UniRef50_A6GQE5 Nucleoside diphosphate kinase regulator n=1 Tax=...   129   4e-29
UniRef50_B3PF63 Regulator of nucleoside diphosphate kinase n=1 T...   128   4e-29
UniRef50_A1TUC9 GreA/GreB family elongation factor n=4 Tax=Burkh...   127   1e-28
UniRef50_A5VGM9 GreA/GreB family elongation factor n=1 Tax=Sphin...   126   3e-28
UniRef50_C6VSR5 GreA/GreB family elongation factor n=2 Tax=Sphin...   125   4e-28
UniRef50_B8IFL5 GreA/GreB family elongation factor n=8 Tax=Methy...   124   1e-27
UniRef50_B9KH08 Transcription elongation factor n=9 Tax=Ricketts...   124   1e-27
UniRef50_Q3SU57 GreA/GreB family elongation factor n=9 Tax=Brady...   123   1e-27
UniRef50_A5V983 GreA/GreB family elongation factor n=1 Tax=Sphin...   123   2e-27
UniRef50_Q5P744 Transcription elongation factor n=3 Tax=Proteoba...   122   3e-27
UniRef50_P64276 Transcription elongation factor greA n=48 Tax=de...   120   1e-26
UniRef50_A8LN19 GreA/GreB family elongation factor n=8 Tax=Alpha...   120   1e-26
UniRef50_C6WYK0 GreA/GreB family elongation factor n=2 Tax=Methy...   120   1e-26
UniRef50_A9EFF1 GreA/GreB family elongation factor n=1 Tax=Ocean...   119   2e-26
UniRef50_A7IJH2 GreA/GreB family elongation factor n=4 Tax=Rhizo...   119   2e-26
UniRef50_B4RF21 Transcription elongation factor n=2 Tax=cellular...   119   2e-26
UniRef50_A8HR94 Transcription elongation factor greA n=5 Tax=Pro...   119   3e-26
UniRef50_Q0A765 Transcription elongation factor greA n=23 Tax=Pr...   119   4e-26
UniRef50_B0T7C4 GreA/GreB family elongation factor n=1 Tax=Caulo...   118   7e-26
UniRef50_Q98F06 Nucleoside diphosphate kinase regulator n=2 Tax=...   117   7e-26
UniRef50_A7HFE1 GreA/GreB family elongation factor n=1 Tax=Anaer...   117   9e-26
UniRef50_B3E3H5 Transcription elongation factor greA n=19 Tax=Pr...   117   1e-25
UniRef50_Q057J4 Transcription elongation factor greA n=20 Tax=Pr...   117   1e-25
UniRef50_Q1LSK1 Transcription elongation factor greA n=16 Tax=Pr...   117   1e-25
UniRef50_B2S6W5 Transcription elongation factor greA n=39 Tax=Ba...   116   2e-25
UniRef50_A1U1V6 GreA/GreB family elongation factor n=2 Tax=Marin...   116   2e-25
UniRef50_B7L307 GreA/GreB family elongation factor n=1 Tax=Methy...   116   2e-25
UniRef50_Q4HT85 Transcription elongation factor n=1 Tax=Campylob...   116   3e-25
UniRef50_Q7UVA0 Transcription elongation factor greA n=3 Tax=Pla...   116   3e-25
UniRef50_D2R891 Transcription elongation factor GreA n=1 Tax=Pir...   115   4e-25
UniRef50_Q1H282 GreA/GreB family elongation factor n=2 Tax=Prote...   115   5e-25
UniRef50_C6XWY5 Transcription elongation factor GreA/GreB domain...   114   1e-24
UniRef50_C0QKN0 Transcription elongation factor n=1 Tax=Desulfob...   114   1e-24
UniRef50_B0T793 GreA/GreB family elongation factor n=1 Tax=Caulo...   113   2e-24
UniRef50_Q7VM42 Transcription elongation factor greB n=27 Tax=Pr...   113   2e-24
UniRef50_A7HAZ2 GreA/GreB family elongation factor n=5 Tax=Myxoc...   113   2e-24
UniRef50_A6LPL4 Transcription elongation factor greA n=30 Tax=Cl...   113   2e-24
UniRef50_A4BB58 Nucleoside diphosphate kinase regulator n=1 Tax=...   112   2e-24
UniRef50_Q2GA51 GreA/GreB family elongation factor n=1 Tax=Novos...   112   3e-24
UniRef50_Q725M4 Transcription elongation factor greA n=4 Tax=Des...   112   4e-24
UniRef50_A8F083 Transcription elongation factor greA n=13 Tax=Ri...   111   5e-24
UniRef50_A3ESJ0 Transcription elongation factor n=4 Tax=Bacteria...   111   6e-24
UniRef50_Q04EK0 Transcription elongation factor greA n=4 Tax=Bac...   111   7e-24
UniRef50_C0A6F4 GreA/GreB family elongation factor n=1 Tax=Opitu...   111   8e-24
UniRef50_Q930S2 Putative uncharacterized protein n=1 Tax=Sinorhi...   111   8e-24
UniRef50_B1ZU20 GreA/GreB family elongation factor n=1 Tax=Opitu...   111   8e-24
UniRef50_Q0BZP7 Regulatory protein n=1 Tax=Hyphomonas neptunium ...   111   1e-23
UniRef50_Q8ZJH2 Transcription elongation factor greB n=165 Tax=P...   110   2e-23
UniRef50_D0J9T5 Transcription elongation factor n=55 Tax=Bacteri...   110   2e-23
UniRef50_B4UCU9 Transcription elongation factor greA n=588 Tax=B...   109   2e-23
UniRef50_Q97EB6 Transcription elongation factor greA n=6 Tax=Clo...   109   3e-23
UniRef50_Q15Z69 GreA/GreB family elongation factor n=1 Tax=Pseud...   109   3e-23
UniRef50_A5V3E1 Transcription elongation factor greA n=13 Tax=Pr...   109   3e-23
UniRef50_A4CMB9 Nucleoside diphosphate kinase regulator n=1 Tax=...   109   4e-23
UniRef50_D0LKY5 Transcription elongation factor n=1 Tax=Haliangi...   108   5e-23
UniRef50_UPI00016C498C transcription elongation factor greA n=1 ...   108   6e-23
UniRef50_C9RKD0 Transcription elongation factor n=1 Tax=Fibrobac...   108   6e-23
UniRef50_Q2GD99 Transcription elongation factor greA n=2 Tax=Neo...   108   7e-23
UniRef50_Q9HZY5 Transcription elongation factor greB n=13 Tax=Ga...   107   8e-23
UniRef50_A6EIL5 Nucleoside diphosphate kinase regulator protein,...   107   8e-23
UniRef50_C4XLU8 Transcription elongation factor greA n=11 Tax=De...   107   1e-22
UniRef50_A9WK05 Transcription elongation factor greA n=6 Tax=Chl...   107   1e-22
UniRef50_D1B0C0 Transcription elongation factor n=4 Tax=Campylob...   107   1e-22
UniRef50_Q5QX12 Transcription elongation factor family protein n...   107   1e-22
UniRef50_A5FRA2 Transcription elongation factor n=3 Tax=Dehaloco...   107   2e-22
UniRef50_Q88DU7 Transcription elongation factor greA n=83 Tax=Pr...   106   2e-22
UniRef50_B1MX52 Transcription elongation factor greA n=11 Tax=Fi...   106   2e-22
UniRef50_Q1H0G6 GreA/GreB family elongation factor n=3 Tax=Prote...   106   2e-22
UniRef50_D1B632 Transcription elongation factor n=4 Tax=Synergis...   106   2e-22
UniRef50_UPI0001C3129D transcription elongation factor GreA n=1 ...   106   2e-22
UniRef50_Q2LR03 Transcription elongation factor greA n=1 Tax=Syn...   106   2e-22
UniRef50_A7HDS3 Transcription elongation factor GreB n=3 Tax=Myx...   106   2e-22
UniRef50_A0AIU5 Transcription elongation factor greA n=99 Tax=Ba...   106   2e-22
UniRef50_A0LZA7 Transcription elongation factor n=1 Tax=Gramella...   105   4e-22
UniRef50_C7GYY1 Transcription elongation factor n=1 Tax=Eubacter...   105   4e-22
UniRef50_A5FHU8 GreA/GreB family elongation factor n=1 Tax=Flavo...   105   5e-22
UniRef50_C6WVB7 GreA/GreB family elongation factor n=2 Tax=Methy...   104   9e-22
UniRef50_A0LK20 Transcription elongation factor greA n=1 Tax=Syn...   104   1e-21
UniRef50_C9RNS9 GreA/GreB family elongation factor n=1 Tax=Fibro...   103   1e-21
UniRef50_A3PS97 GreA/GreB family elongation factor n=4 Tax=Rhodo...   103   2e-21
UniRef50_Q98F07 Nucleoside diphosphate kinase regulator; Rnk n=2...   103   2e-21
UniRef50_A7HXN2 GreA/GreB family elongation factor n=1 Tax=Parvi...   103   2e-21
UniRef50_Q096W9 Transcription elongation factor GreB n=1 Tax=Sti...   102   2e-21
UniRef50_B4W8F1 Putative uncharacterized protein n=1 Tax=Brevund...   102   3e-21
UniRef50_Q67JL1 Transcription elongation factor n=2 Tax=Clostrid...   102   3e-21
UniRef50_A8SDG2 Transcription elongation factor n=2 Tax=Clostrid...   102   5e-21
UniRef50_C9KJ19 Transcription elongation factor n=1 Tax=Mitsuoke...   102   5e-21
UniRef50_C7CFG6 Putative regulator n=1 Tax=Methylobacterium exto...   101   6e-21
UniRef50_C0QWD9 Transcription elongation factor n=2 Tax=Brachysp...   101   8e-21
UniRef50_Q817Z6 Transcription elongation factor greA n=141 Tax=c...   101   8e-21
UniRef50_Q1QUF3 GreA/GreB family elongation factor n=1 Tax=Chrom...   100   9e-21
UniRef50_Q2Z001 Transcription elongation factor n=1 Tax=uncultur...   100   1e-20
UniRef50_B4RBL2 Transcription elongation factor n=1 Tax=Phenylob...   100   1e-20
UniRef50_A6EMP4 Transcription elongation factor n=4 Tax=Bacteroi...   100   1e-20
UniRef50_B9XEY1 GreA/GreB family elongation factor n=1 Tax=bacte...   100   2e-20
UniRef50_A5CVW9 Transcription elongation factor greA n=4 Tax=Gam...   100   2e-20
UniRef50_C1XQ58 Transcription elongation factor n=2 Tax=Meiother...   100   2e-20
UniRef50_Q30T56 Transcription elongation factor n=3 Tax=Campylob...   100   2e-20
UniRef50_Q2Y7V5 GreA/GreB family elongation factor n=33 Tax=cell...   100   2e-20
UniRef50_Q0BR49 Transcription elongation factor greB n=4 Tax=cel...   100   2e-20
UniRef50_A6W1U9 Transcription elongation factor GreB n=17 Tax=Ga...   100   2e-20
UniRef50_Q03RN4 Transcription elongation factor n=1 Tax=Lactobac...   100   2e-20
UniRef50_B8IHN9 GreA/GreB family elongation factor n=1 Tax=Methy...   100   2e-20
UniRef50_Q3Z8E7 Transcription elongation factor greA n=2 Tax=Deh...    99   3e-20
UniRef50_Q3ATA7 Transcription elongation factor greA n=13 Tax=Ba...    99   3e-20
UniRef50_C1F9R4 Transcription elongation factor GreA n=1 Tax=Aci...    99   3e-20
UniRef50_C8S319 GreA/GreB family elongation factor n=1 Tax=Rhodo...    99   4e-20
UniRef50_A3HZU2 Transcription elongation factor GreB n=2 Tax=Bac...    99   5e-20
UniRef50_C4Z9L9 Transcription elongation factor n=3 Tax=Firmicut...    99   5e-20
UniRef50_Q98Q16 Transcription elongation factor greA n=3 Tax=Myc...    99   5e-20
UniRef50_C7PP41 Transcription elongation factor n=1 Tax=Chitinop...    98   6e-20
UniRef50_Q01RT9 GreA/GreB family elongation factor n=2 Tax=Acido...    98   6e-20
UniRef50_Q1AU03 Transcription elongation factor n=1 Tax=Rubrobac...    98   6e-20
UniRef50_D0J5N8 Kelongation factor GreB n=4 Tax=Proteobacteria R...    98   7e-20
UniRef50_Q1PYP5 Transcription elongation factor n=1 Tax=Candidat...    98   1e-19
UniRef50_C0JZV3 Transcription elongation factor GreA n=1 Tax=unc...    98   1e-19
UniRef50_D1PEW3 Transcription elongation factor n=1 Tax=Prevotel...    97   2e-19
UniRef50_UPI0001C37CEA transcription elongation factor GreA n=1 ...    97   2e-19
UniRef50_D2T9B8 Transcription elongation factor greB n=3 Tax=Erw...    96   3e-19
UniRef50_Q04HS9 Transcription elongation factor greA n=90 Tax=Ba...    96   3e-19
UniRef50_C6X3W9 Transcription elongation factor GreB n=1 Tax=Fla...    96   3e-19
UniRef50_C1ZBG3 Transcription elongation factor n=1 Tax=Planctom...    96   3e-19
UniRef50_Q8P7P8 Transcription elongation factor greB n=53 Tax=Pr...    96   4e-19
UniRef50_Q88KH5 Transcription elongation factor greB n=84 Tax=Ga...    96   4e-19
UniRef50_B2KBD2 GreA/GreB family elongation factor n=1 Tax=Elusi...    96   5e-19
UniRef50_Q1J0L4 Transcription elongation factor n=3 Tax=Deinococ...    95   5e-19
UniRef50_A5FHJ3 GreA/GreB family elongation factor n=3 Tax=Flavo...    95   5e-19
UniRef50_Q11G80 GreA/GreB family elongation factor n=1 Tax=Chela...    95   6e-19
UniRef50_A6H247 Transcription elongation factor greA n=33 Tax=Ba...    95   6e-19
UniRef50_Q1CX76 Transcription elongation factor, GreA/GreB famil...    95   7e-19
UniRef50_A6NPJ1 Putative uncharacterized protein n=1 Tax=Bactero...    95   7e-19
UniRef50_Q4A759 Transcription elongation factor greA n=4 Tax=Myc...    95   8e-19
UniRef50_Q5SKM1 Transcription elongation factor n=5 Tax=Thermus ...    95   8e-19
UniRef50_O51157 Transcription elongation factor greA n=23 Tax=Bo...    94   8e-19
UniRef50_B1ZD84 GreA/GreB family elongation factor n=4 Tax=Methy...    94   1e-18
UniRef50_Q12SN9 Transcription elongation factor GreB n=17 Tax=Ba...    94   1e-18
UniRef50_A5IYH4 Transcription elongation factor greA n=3 Tax=Myc...    94   1e-18
UniRef50_B1H062 Transcription elongation factor n=1 Tax=uncultur...    94   1e-18
UniRef50_D2RL35 GreA/GreB family elongation factor n=3 Tax=Veill...    94   1e-18
UniRef50_A0M1N1 GreA-like transcription elongation factor n=3 Ta...    94   2e-18
UniRef50_B9KZF4 Transcription elongation factor greA n=2 Tax=The...    93   2e-18
UniRef50_A5VME9 Transcription elongation factor GreA n=49 Tax=La...    93   2e-18
UniRef50_A2SJD8 Transcription elongation factor n=50 Tax=Proteob...    93   2e-18
UniRef50_C5BN87 Transcription elongation factor GreB n=5 Tax=Pro...    93   2e-18
UniRef50_Q2S2N3 Transcription elongation factor n=1 Tax=Saliniba...    93   3e-18
UniRef50_A2RGA4 Transcription elongation factor greA n=111 Tax=F...    93   3e-18
UniRef50_B1AIU2 Transcription elongation factor greA n=28 Tax=Ur...    93   3e-18
UniRef50_Q13CU9 Putative uncharacterized protein n=1 Tax=Rhodops...    93   3e-18
UniRef50_B5ZLJ0 Transcription elongation factor GreB n=5 Tax=Pro...    93   3e-18
UniRef50_Q9JVD0 Transcription elongation factor greB n=64 Tax=Ba...    93   4e-18
UniRef50_Q2N9J5 Transcription elongation factor n=2 Tax=Erythrob...    93   4e-18
UniRef50_C5BTE2 Transcription elongation factor GreA n=1 Tax=Ter...    93   4e-18
UniRef50_Q4K5S3 Transcription elongation factor GreB n=3 Tax=Pse...    92   6e-18
UniRef50_A9BFC0 Transcription elongation factor greA n=12 Tax=Th...    92   6e-18
UniRef50_B2S1W7 Transcription elongation factor greA n=6 Tax=Tre...    92   6e-18
UniRef50_B4UMG4 GreA/GreB family elongation factor n=4 Tax=Anaer...    91   7e-18
UniRef50_B4D5K0 GreA/GreB family elongation factor n=1 Tax=Chtho...    91   9e-18
UniRef50_B2V1C0 Transcription elongation factor n=28 Tax=Clostri...    91   9e-18
UniRef50_D2QK34 GreA/GreB family elongation factor n=1 Tax=Spiro...    91   9e-18
UniRef50_Q04UP0 Transcription elongation factor n=6 Tax=Leptospi...    91   1e-17
UniRef50_B5Y9H5 Transcription elongation factor n=1 Tax=Coprothe...    91   1e-17
UniRef50_C7T958 Transcription elongation factor n=4 Tax=Lactobac...    91   1e-17
UniRef50_A6NZ08 Transcription elongation factor n=1 Tax=Bacteroi...    91   1e-17
UniRef50_C8W826 Transcription elongation factor n=7 Tax=Coriobac...    91   1e-17
UniRef50_B7CAB2 Transcription elongation factor n=5 Tax=Erysipel...    91   1e-17
UniRef50_Q848L1 GreA n=1 Tax=uncultured bacterium RepID=Q848L1_9...    91   1e-17
UniRef50_B0VIH5 Putative transcription elongation factor n=1 Tax...    91   1e-17
UniRef50_A0LES5 GreA/GreB family elongation factor n=1 Tax=Syntr...    91   1e-17
UniRef50_Q0B0N4 Transcription elongation factor greA n=6 Tax=Clo...    91   1e-17
UniRef50_B0P8A6 Transcription elongation factor n=1 Tax=Anaerotr...    90   2e-17
UniRef50_B9L0L0 Transcription elongation factor greA n=1 Tax=The...    90   2e-17
UniRef50_B3DVF3 Transcription elongation factor GreA fused to un...    90   3e-17
UniRef50_D1C6T4 Transcription elongation factor n=1 Tax=Sphaerob...    89   3e-17
UniRef50_D1CDC6 Transcription elongation factor n=1 Tax=Thermoba...    89   3e-17
UniRef50_Q88ZS9 Transcription elongation factor greA 1 n=7 Tax=L...    89   3e-17
UniRef50_B1XUH7 Transcription elongation factor GreB n=2 Tax=Pol...    89   3e-17
UniRef50_D0WJ76 Transcription elongation factor n=1 Tax=Slackia ...    89   4e-17
UniRef50_B0N6V6 Transcription elongation factor n=4 Tax=Bacteria...    89   4e-17
UniRef50_A6STV7 Transcription elongation factor GreB n=2 Tax=Oxa...    89   4e-17
UniRef50_A7HXN3 GreA/GreB family elongation factor n=1 Tax=Parvi...    88   7e-17
UniRef50_C7N7T1 Transcription elongation factor n=1 Tax=Slackia ...    88   8e-17
UniRef50_B3PM73 Transcription elongation factor greA n=1 Tax=Myc...    88   9e-17
UniRef50_UPI0001746370 transcript cleavage factor/unknown domain...    88   9e-17
UniRef50_C4ZAT8 Transcription elongation factor GreA n=21 Tax=Fi...    88   9e-17
UniRef50_A7VBG3 Putative uncharacterized protein n=1 Tax=Clostri...    88   1e-16
UniRef50_A4E9C2 Transcription elongation factor n=1 Tax=Collinse...    88   1e-16
UniRef50_A6SZ83 Transcription elongation factor, greA family n=2...    88   1e-16
UniRef50_P47524 Transcription elongation factor greA n=4 Tax=Myc...    88   1e-16
UniRef50_Q2G8D8 GreA/GreB family elongation factor n=4 Tax=cellu...    88   1e-16
UniRef50_B1ZZX3 GreA/GreB family elongation factor n=3 Tax=Verru...    87   2e-16
UniRef50_C4L6P4 GreA/GreB family elongation factor n=1 Tax=Exigu...    87   2e-16
UniRef50_D1R523 Putative uncharacterized protein n=1 Tax=Parachl...    87   2e-16
UniRef50_C6B1R3 GreA/GreB family elongation factor n=16 Tax=cell...    87   2e-16
UniRef50_B1ZQE9 GreA/GreB family elongation factor n=1 Tax=Opitu...    87   2e-16
UniRef50_B1I1G7 GreA/GreB family elongation factor n=1 Tax=Candi...    86   2e-16
UniRef50_B9XT30 GreA/GreB family elongation factor n=1 Tax=bacte...    86   2e-16
UniRef50_UPI00017427C8 transcription elongation factor GreA n=1 ...    86   3e-16
UniRef50_B9KMW2 Transcription elongation factor n=3 Tax=Rhodobac...    86   3e-16
UniRef50_D0KZQ0 Transcription elongation factor GreB n=1 Tax=Hal...    86   3e-16
UniRef50_A6X2G5 GreA/GreB family elongation factor n=2 Tax=Ochro...    86   4e-16
UniRef50_B9J7D6 Transcription elongation factor protein n=52 Tax...    86   5e-16
UniRef50_Q5SJG6 Anti-cleavage anti-GreA transcription factor Gfh...    85   6e-16
UniRef50_Q2SSM5 Transcription elongation factor greA n=6 Tax=Mol...    85   6e-16
UniRef50_A5D4X0 Putative uncharacterized protein n=1 Tax=Pelotom...    84   1e-15
UniRef50_A9NGN4 Transcription elongation factor greA n=7 Tax=Ach...    84   1e-15
UniRef50_Q88Q22 Transcription elongation factor, putative n=11 T...    84   2e-15
UniRef50_Q6MF39 Putative uncharacterized protein n=1 Tax=Candida...    84   2e-15
UniRef50_B4D3Z7 GreA/GreB family elongation factor n=1 Tax=Chtho...    83   2e-15
UniRef50_Q9Z7G4 Transcription elongation factor greA n=13 Tax=Ch...    83   3e-15
UniRef50_B2UNZ9 GreA/GreB family elongation factor n=1 Tax=Akker...    83   4e-15
UniRef50_UPI0001C31C12 transcription elongation factor GreA n=1 ...    81   9e-15
UniRef50_C6XVH8 Transcription elongation factor n=1 Tax=Pedobact...    81   1e-14
UniRef50_UPI0001746B72 nucleoside diphosphate kinase regulator p...    81   1e-14
UniRef50_B4RDE4 Transcription elongation factor GreA/GreB, famil...    81   1e-14
UniRef50_B6BTF1 GreA/GreB family elongation factor n=2 Tax=Betap...    80   2e-14

Sequences not found previously or not previously below threshold:

>UniRef50_Q2LTP9 Transcription elongation factor n=2 Tax=Deltaproteobacteria
           RepID=Q2LTP9_SYNAS
          Length = 134

 Score =  167 bits (424), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 61/136 (44%), Positives = 85/136 (62%), Gaps = 2/136 (1%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           M++  I + + D ER++ LLE         A +L AEL  A +   EEMP DVVTMNS V
Sbjct: 1   MNKRRIYVTEQDMERLEDLLETS--KKSEYARSLEAELVNAVVVPSEEMPPDVVTMNSCV 58

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
            F +L+ G     TLVYP +   ++ ++SV+APVG+AL+GL VG +I W +P G    L 
Sbjct: 59  CFEDLTTGNRETITLVYPGQANMASGRVSVLAPVGSALIGLSVGQTIEWPMPNGRKRRLR 118

Query: 121 VLELEYQPEAAGDYLL 136
           ++E+ YQPEAAGD+ L
Sbjct: 119 IVEVLYQPEAAGDFHL 134


>UniRef50_C5S652 GreA/GreB family elongation factor n=2 Tax=Proteobacteria
           RepID=C5S652_CHRVI
          Length = 171

 Score =  166 bits (420), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 65/133 (48%), Positives = 86/133 (64%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
           S+P II++ LDAER++ L+E       P  D L AEL RA++  P EMP +VV+MNS V+
Sbjct: 37  SQPKIILSSLDAERLENLIESLPRNAFPGMDELEAELARAEVVDPREMPPNVVSMNSTVR 96

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           FR +S  E    TLVYP  M  S  ++S++APVG+ALLGL  GD I W  PGG    + +
Sbjct: 97  FRVMSTNEAFTLTLVYPKDMDASGGKISILAPVGSALLGLSSGDEIEWPKPGGGVLRVRI 156

Query: 122 LELEYQPEAAGDY 134
            E+ YQPE AG+Y
Sbjct: 157 EEVTYQPERAGEY 169


>UniRef50_P0AFW6 Regulator of nucleoside diphosphate kinase n=155
           Tax=Enterobacteriaceae RepID=RNK_ECO57
          Length = 136

 Score =  160 bits (405), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 136/136 (100%), Positives = 136/136 (100%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV
Sbjct: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
           KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE
Sbjct: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120

Query: 121 VLELEYQPEAAGDYLL 136
           VLELEYQPEAAGDYLL
Sbjct: 121 VLELEYQPEAAGDYLL 136


>UniRef50_Q3BX42 Regulator of nucleoside diphosphate kinase n=9
           Tax=Gammaproteobacteria RepID=Q3BX42_XANC5
          Length = 146

 Score =  158 bits (401), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 58/131 (44%), Positives = 84/131 (64%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFR 63
           P+I+++  D  R++ LL+ PA+   P A AL+ EL RA++  P+++P DVVTM+SR++  
Sbjct: 11  PSILVSSHDLARLEALLDSPAFNKHPAATALSDELGRARVLPPDQIPGDVVTMHSRIECE 70

Query: 64  NLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLE 123
           +   GE    TLVYP +    + ++SV+APVG+ALLGL VG SI W  P G    L V  
Sbjct: 71  DQLHGERHTLTLVYPHEADVQHGRISVLAPVGSALLGLSVGQSIDWRTPDGRDLRLRVTA 130

Query: 124 LEYQPEAAGDY 134
           +  QP AAGD+
Sbjct: 131 VHDQPAAAGDF 141


>UniRef50_A6VVR5 GreA/GreB family elongation factor n=15 Tax=Proteobacteria
           RepID=A6VVR5_MARMS
          Length = 137

 Score =  158 bits (399), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 58/136 (42%), Positives = 88/136 (64%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           M RP I I+ LDA R++ +L+  +Y+  P  D L  E++RA++  P +MP ++VTMNS V
Sbjct: 2   MQRPQITISSLDAVRLEKILDSLSYSQFPNKDDLQEEINRAEIVEPRDMPDNIVTMNSTV 61

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
            F+ LS  +   +TLVYP     +   +SV+APVG+ALLGL+ GD I W  P G    + 
Sbjct: 62  TFKVLSSEKEFSKTLVYPKDANGAEDTVSVLAPVGSALLGLKEGDQIDWPKPNGDVLSVV 121

Query: 121 VLELEYQPEAAGDYLL 136
           +++++YQPE AG++ L
Sbjct: 122 IMKVDYQPERAGEFQL 137


>UniRef50_B5EI69 GreA/GreB family elongation factor n=6 Tax=Desulfuromonadales
           RepID=B5EI69_GEOBB
          Length = 143

 Score =  154 bits (391), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 52/138 (37%), Positives = 86/138 (62%), Gaps = 4/138 (2%)

Query: 2   SRPTIIINDLDAERIDILLEQPAY---AGLPIADALNAELDRAQMCSPEEMPHDVVTMNS 58
           ++  +++ + D ER++ L+++              L  EL RA++  P  +P DV+TMNS
Sbjct: 7   AQRQVVVTEFDMERLEALIDKARSTQTRDSKNLKELGEELVRAEVVDPAGIPPDVITMNS 66

Query: 59  RVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATH 118
           +V  ++L   E  V TLV+P +   ++ ++S++APVG A++G R GD I W +PGG+  +
Sbjct: 67  KVCLQDLDSEEELVYTLVFPNEADLASGKISILAPVGTAMIGFRTGDRITWPVPGGM-KN 125

Query: 119 LEVLELEYQPEAAGDYLL 136
           L+V ++ YQPEAAGDY L
Sbjct: 126 LKVKKILYQPEAAGDYHL 143


>UniRef50_A0LL17 GreA/GreB family elongation factor n=3 Tax=Bacteria
           RepID=A0LL17_SYNFM
          Length = 141

 Score =  153 bits (387), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 50/140 (35%), Positives = 78/140 (55%), Gaps = 6/140 (4%)

Query: 2   SRPTIIINDLDAERIDILLE-----QPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTM 56
            R  I ++D D +R++ L+E     +           L  EL +A++ +   +P D VTM
Sbjct: 3   KRRKIYVSDYDMKRLEKLIELLSEDEWDDRDTKHLQVLEEELRKAEVVAARNIPRDTVTM 62

Query: 57  NSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVA 116
           NS+V+ ++L  G   +  LV+P +      ++SV+AP+G AL+G  VGD I W +P G  
Sbjct: 63  NSKVRVKDLDTGIETIYHLVFPGEADVKQNRISVLAPIGTALIGYAVGDVIQWNVPAGT- 121

Query: 117 THLEVLELEYQPEAAGDYLL 136
             L + E+ YQPEAAGD+ L
Sbjct: 122 KKLRIEEILYQPEAAGDFHL 141


>UniRef50_B8GS58 GreA/GreB family elongation factor n=22 Tax=Proteobacteria
           RepID=B8GS58_THISH
          Length = 137

 Score =  153 bits (387), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 59/133 (44%), Positives = 86/133 (64%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKF 62
           +P+I ++ LD +R++ LL+      L     L AEL+RA +  P ++P  +VTMNSRV+F
Sbjct: 4   QPSITLSSLDLDRLEHLLDSLPREALANHRQLLAELERANVVEPSQVPPTLVTMNSRVRF 63

Query: 63  RNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVL 122
           R   +G    RTLVYP+ M     ++SV+AP+G+ALLGL VGDSI W  P G   ++ ++
Sbjct: 64  RVEPEGREFQRTLVYPSGMDGDEEKISVLAPIGSALLGLSVGDSIAWPTPKGGEMNVRIM 123

Query: 123 ELEYQPEAAGDYL 135
           E+ YQPEAAG+  
Sbjct: 124 EILYQPEAAGEMH 136


>UniRef50_Q6MQZ8 Regulator of nucleoside diphosphate kinase n=1 Tax=Bdellovibrio
           bacteriovorus RepID=Q6MQZ8_BDEBA
          Length = 138

 Score =  153 bits (387), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 58/135 (42%), Positives = 84/135 (62%), Gaps = 3/135 (2%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
           + P I++ D D  R+  L+   +    P A+AL  EL RA + + +E+P +VVTMNSRV+
Sbjct: 7   TEPRILVTDQDFHRLSALV---SQVEGPFAEALEEELSRANVIAQKEIPKNVVTMNSRVQ 63

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           F +   G+    TLVYP        +LS++APVG ALLGL VG  I+W+LP G +  L+V
Sbjct: 64  FLDEVSGQESEMTLVYPQDAKLEEGRLSILAPVGIALLGLSVGQEINWKLPNGQSKKLKV 123

Query: 122 LELEYQPEAAGDYLL 136
             + YQPEA+G++ L
Sbjct: 124 QAVTYQPEASGNFDL 138


>UniRef50_Q1H3Z9 GreA/GreB family elongation factor n=1 Tax=Methylobacillus
           flagellatus KT RepID=Q1H3Z9_METFK
          Length = 138

 Score =  146 bits (370), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 57/139 (41%), Positives = 83/139 (59%), Gaps = 4/139 (2%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIAD---ALNAELDRAQMCSPEEMPHDVVTMN 57
           M +  I +   D +R+  ++EQ    G P  D    L  EL R++    E++  DVVTMN
Sbjct: 1   MLQGAIQVTSFDMDRLFSMIEQLRKNGFPETDNLARLEDELARSEEVPSEQVGADVVTMN 60

Query: 58  SRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVAT 117
           SRV  R+ ++G     TLV+P+    S  ++SV+AP+G A+LG RVGD I W +PGG   
Sbjct: 61  SRVLLRDEANGHEMSCTLVFPSDADASANRISVVAPLGTAILGYRVGDVIDWAMPGG-VR 119

Query: 118 HLEVLELEYQPEAAGDYLL 136
              +L+++YQPEAAGD+ L
Sbjct: 120 QYRILKIDYQPEAAGDFHL 138


>UniRef50_Q11P04 Transcription elongation factor n=1 Tax=Cytophaga hutchinsonii ATCC
           33406 RepID=Q11P04_CYTH3
          Length = 149

 Score =  145 bits (367), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 46/135 (34%), Positives = 73/135 (54%), Gaps = 4/135 (2%)

Query: 5   TIIINDLDAERIDILLEQPAYAGLP---IADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
             IIN LD  RI   + +           A++L  EL   ++  PEE+P++VVTM+S V 
Sbjct: 16  RTIINKLDYSRIQQCINEAKQFKSISVVEANSLMNELKLGKLVEPEEIPNNVVTMHSIVT 75

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
              +   +     LVYP K    N ++S+ +P+  AL+G ++GD I W +P G+   +++
Sbjct: 76  IVFMDSNKRVEFQLVYPDKADVKNNKISIFSPIATALIGYQIGDEIEWCVPAGMT-KIKI 134

Query: 122 LELEYQPEAAGDYLL 136
             + YQPEAAG + L
Sbjct: 135 ESIAYQPEAAGHFNL 149


>UniRef50_C6RP41 GreA/GreB family elongation factor n=4 Tax=Acinetobacter
           RepID=C6RP41_ACIRA
          Length = 134

 Score =  143 bits (361), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 50/134 (37%), Positives = 74/134 (55%), Gaps = 1/134 (0%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           M++P III+  D  R++ +LE  +       + L  EL RA++  P E+P +VV+MN+RV
Sbjct: 1   MAKPNIIISSQDLHRLETMLEHQS-HMTQTIEHLEDELARAEVVEPHEIPANVVSMNTRV 59

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
                   E     LVYP        Q++V+AP+GAA+LGL  G  I W  P G    ++
Sbjct: 60  LITIAPSTEPTEIQLVYPHDFRGDKGQVNVLAPIGAAILGLAEGQEIEWPQPDGHLMKVK 119

Query: 121 VLELEYQPEAAGDY 134
           + ++ YQPE  GDY
Sbjct: 120 IEKVLYQPEREGDY 133


>UniRef50_B0SEQ9 Transcription elongation factor n=2 Tax=Leptospira biflexa serovar
           Patoc RepID=B0SEQ9_LEPBA
          Length = 138

 Score =  141 bits (356), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 46/137 (33%), Positives = 76/137 (55%), Gaps = 3/137 (2%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAG--LPIADALNAELDRAQMCSPEEMPHDVVTMNSR 59
           ++  I I +LD  R+  ++ + +           L  E++RAQ    +++P +VVTMNS 
Sbjct: 3   TKKKISITNLDYIRLKKMILEYSKRNKTDANVQDLLGEIERAQKVDSKQIPSNVVTMNSV 62

Query: 60  VKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHL 119
           ++ +NL   E +   LVYP        Q+S++AP+  A +G + GD I W +P GV    
Sbjct: 63  IEIKNLEGIEFKEFRLVYPEDSNLDQNQISILAPIATASIGYKTGDVIFWNVPDGVYR-F 121

Query: 120 EVLELEYQPEAAGDYLL 136
           ++ E++YQPEA GD+ L
Sbjct: 122 QITEIKYQPEANGDFHL 138


>UniRef50_A4XNX9 GreA/GreB family elongation factor n=16 Tax=Bacteria
           RepID=A4XNX9_PSEMY
          Length = 135

 Score =  140 bits (354), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 64/132 (48%), Positives = 81/132 (61%), Gaps = 2/132 (1%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFR 63
           P I I  LD +R++ LL+     G P A AL AELDRA++   +E+P  +VTMNSRV  R
Sbjct: 5   PAITITRLDLQRLERLLDSLDEFG-PGAAALQAELDRAEVVGLDEVPAGLVTMNSRVHCR 63

Query: 64  NLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLE 123
             S G+    TLVYP         +S++APVG+ALLGL VG  I W  PGG    L +L 
Sbjct: 64  EESSGKDYHLTLVYPQDAG-GEGTVSILAPVGSALLGLSVGQHIDWPAPGGKQLKLTLLA 122

Query: 124 LEYQPEAAGDYL 135
           +EYQPEAAG+Y 
Sbjct: 123 VEYQPEAAGEYD 134


>UniRef50_Q7MD62 Transcription elongation factor n=10 Tax=Proteobacteria
           RepID=Q7MD62_VIBVY
          Length = 135

 Score =  140 bits (354), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 57/132 (43%), Positives = 87/132 (65%), Gaps = 2/132 (1%)

Query: 5   TIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRN 64
           +I ++ LD +RI  LLE+ A    P  + L  ELDRA + +P++MP ++VTMNS V+F  
Sbjct: 6   SICVSTLDMDRISALLEKMAN-LSPELEKLENELDRANVLAPQQMPDNIVTMNSTVRFTF 64

Query: 65  LSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
           +   +V  +TLVYP ++ + +  +S+ APVG+ALLGL VG  + W +PGG    +E+LE+
Sbjct: 65  VGSDKVMEKTLVYPDQVRNPDD-VSIFAPVGSALLGLSVGQQLTWPMPGGAERTIEILEV 123

Query: 125 EYQPEAAGDYLL 136
            YQPE  G++ L
Sbjct: 124 TYQPERMGEFHL 135


>UniRef50_B9MBQ3 GreA/GreB family elongation factor n=6 Tax=Betaproteobacteria
           RepID=B9MBQ3_DIAST
          Length = 135

 Score =  140 bits (353), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 62/134 (46%), Positives = 82/134 (61%), Gaps = 2/134 (1%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
            +P II++ LD ERI+ LLE+      P  +AL AELDRA +  P++MP +VVTMNS V+
Sbjct: 3   RKPHIILSSLDLERIEALLEKQTAP-FPGREALEAELDRADVFDPKDMPPNVVTMNSTVR 61

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           F  L  G+    TLVYP +M  S  ++SV APVG ALLGL VGD      P G    + V
Sbjct: 62  FTLLETGKTNTLTLVYPKEMDGSGDKVSVFAPVGIALLGLGVGDEFQMPSPTG-QVTVRV 120

Query: 122 LELEYQPEAAGDYL 135
             +++QPE AG+  
Sbjct: 121 DAIDFQPENAGELH 134


>UniRef50_B9NGJ6 Predicted protein n=12 Tax=cellular organisms RepID=B9NGJ6_POPTR
          Length = 145

 Score =  139 bits (352), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 55/136 (40%), Positives = 85/136 (62%), Gaps = 3/136 (2%)

Query: 2   SRP-TIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           SRP T+ + +LD  R++ +  +   A L   + L+A L+RA + SP+ +P DVVTMNSRV
Sbjct: 12  SRPATLYLTELDVTRLEGIASRAGTAELD--EMLDALLERAAIVSPDAIPKDVVTMNSRV 69

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
                 + + R  TLVYP     +  +LSV++P+G ALLG R GD++ + LP G A  + 
Sbjct: 70  VCALEGEAKPRDWTLVYPDDADLATGRLSVLSPIGQALLGARSGDTVDYRLPDGRAQRVT 129

Query: 121 VLELEYQPEAAGDYLL 136
           ++E+ +QPEA+G + L
Sbjct: 130 IVEIAFQPEASGQFTL 145


>UniRef50_A9GAI2 Regulator of nucleoside diphosphate kinase n=1 Tax=Sorangium
           cellulosum 'So ce 56' RepID=A9GAI2_SORC5
          Length = 140

 Score =  139 bits (351), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 48/135 (35%), Positives = 74/135 (54%), Gaps = 4/135 (2%)

Query: 5   TIIINDLDAERIDILLEQPAYA---GLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
            I++ + D +R+  LLE          P  +AL  E++RA +  P ++P +VVTMNSRV+
Sbjct: 7   PIVLTEFDRDRLARLLEALRARPGGDSPNLEALEIEIERADVVKPADIPPNVVTMNSRVE 66

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
             +L   E    T+V+P      + ++SV+AP+G ALLG R  D + W  P      L +
Sbjct: 67  LVDLDTEERLCVTVVFPGNADVKSGRISVLAPMGLALLGCREADEVEWPTPS-RTRRLRI 125

Query: 122 LELEYQPEAAGDYLL 136
             + YQPEA+G + L
Sbjct: 126 ERIAYQPEASGRFDL 140


>UniRef50_B5JTX6 Transcription elongation factor n=1 Tax=gamma proteobacterium
           HTCC5015 RepID=B5JTX6_9GAMM
          Length = 138

 Score =  138 bits (349), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 53/135 (39%), Positives = 80/135 (59%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
           + P I + +LD  RI+ LLE+           L  EL R ++ S +E+  DVVTMNSRVK
Sbjct: 4   THPPITLPELDVARIESLLEKLDLKAKNNHTELFEELYRCRIVSSQEVSPDVVTMNSRVK 63

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           +  L   +    TL YP +++ ++  +S++AP+G+A++GL VG  I W LP G    L +
Sbjct: 64  YTRLDTQQQSTLTLCYPDQISRADDAVSILAPIGSAIIGLSVGQIIDWPLPNGKNAPLRI 123

Query: 122 LELEYQPEAAGDYLL 136
            EL +QPE +G+Y L
Sbjct: 124 DELLFQPERSGNYTL 138


>UniRef50_Q13WN5 GreA/GreB family elongation factor n=50 Tax=Burkholderia
           RepID=Q13WN5_BURXL
          Length = 136

 Score =  137 bits (346), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 44/135 (32%), Positives = 72/135 (53%), Gaps = 1/135 (0%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
              T  + +LD  R++        A   + D L+  L+RA +    E+P +VVTMNS+  
Sbjct: 3   KTKTCYLTELDVARLEKHA-AAPGADARLQDMLDDVLERAVIVDSHEIPANVVTMNSQAT 61

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
             + + GE    T+VYP     ++ +L+V +P G ALLG + G+ I +  P G    L++
Sbjct: 62  LVDETSGEHMTWTVVYPPNADFAHGRLNVFSPAGLALLGAKRGERIRFTPPSGTEKVLKL 121

Query: 122 LELEYQPEAAGDYLL 136
            ++ +QPEAA D+ L
Sbjct: 122 EKILFQPEAADDFTL 136


>UniRef50_B8G0E1 GreA/GreB family elongation factor n=2 Tax=Desulfitobacterium
           hafniense RepID=B8G0E1_DESHD
          Length = 138

 Score =  137 bits (346), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 56/140 (40%), Positives = 79/140 (56%), Gaps = 6/140 (4%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAY----AGLPIADALNAELDRAQMCSPEEMPHDVVTM 56
           MSR  I I  +D ER+  L+ +               L  EL+ A +   E++P + +TM
Sbjct: 1   MSR-KISITAVDRERLLKLINKEREFGSAKNKDYLKDLEHELNGADVVPSEKIPGNAITM 59

Query: 57  NSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVA 116
           NSR+  ++L  GE  V TLVYP        ++S++APVG A+LG   GD I W++PGGV 
Sbjct: 60  NSRILLKDLETGEETVYTLVYPEDADLLEDKISILAPVGTAILGYLEGDIIDWKVPGGVV 119

Query: 117 THLEVLELEYQPEAAGDYLL 136
              +V ++ YQPEAAGDY L
Sbjct: 120 R-FKVEKILYQPEAAGDYHL 138


>UniRef50_Q3K4S3 Regulator of nucleoside diphosphate kinase n=2 Tax=Pseudomonas
           fluorescens RepID=Q3K4S3_PSEPF
          Length = 136

 Score =  134 bits (339), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 60/135 (44%), Positives = 81/135 (60%), Gaps = 2/135 (1%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRA-QMCSPEEMPHDVVTMNSR 59
           M+ P+I +  LD +R++ L++      LP   AL  ELDRA  +   +E+P DVVTMNSR
Sbjct: 1   MTAPSITLTRLDVQRLERLIDSLDDT-LPGVIALQTELDRADTLVGHDEVPADVVTMNSR 59

Query: 60  VKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHL 119
           V  R  S G+    TLVYP        ++S++APVG+ALLGL+VG  I W  PGG    L
Sbjct: 60  VHCREESSGKDYHLTLVYPKHANADEGKVSILAPVGSALLGLKVGQHIDWPAPGGKTLKL 119

Query: 120 EVLELEYQPEAAGDY 134
            +LE+E QP   GD+
Sbjct: 120 TLLEVESQPSNGGDF 134


>UniRef50_A9MBQ4 GreA/GreB family elongation factor n=36 Tax=Brucella
           RepID=A9MBQ4_BRUC2
          Length = 169

 Score =  134 bits (338), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 46/123 (37%), Positives = 73/123 (59%), Gaps = 1/123 (0%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
            +P I+++++D ER+  L    +     IA+ L AELDRA++ + + +P +VV M S V+
Sbjct: 7   KKPNIVVSEVDYERLMGLASNASERFEEIAEELMAELDRAKVVTAKRIPENVVQMGSTVE 66

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           FR  +DG  R  TLVYP +   +  ++S++ P+G AL+GL  G SI W    G    L V
Sbjct: 67  FR-ANDGHERRVTLVYPGEADIAKNRISILTPIGTALIGLAPGQSISWTARDGKQHELNV 125

Query: 122 LEL 124
           L++
Sbjct: 126 LKV 128


>UniRef50_C9P6Y2 Regulator of nucleoside diphosphate kinase n=1 Tax=Vibrio
           metschnikovii CIP 69.14 RepID=C9P6Y2_VIBME
          Length = 136

 Score =  133 bits (336), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 54/131 (41%), Positives = 81/131 (61%), Gaps = 2/131 (1%)

Query: 5   TIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRN 64
            II++ LD +RI  L+++         + L  ELDRA + +PEE+P DVVTMNS VKF+ 
Sbjct: 7   AIIVSTLDMDRISALMDKLP-KLSKELERLENELDRATVLNPEEIPADVVTMNSTVKFKF 65

Query: 65  LSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
               +V  +TLVYP  +  ++  +S+ APVG+ALLGL  G  + W +P GV   +E++++
Sbjct: 66  QGSDDVMQKTLVYPHDVKGNDD-ISIFAPVGSALLGLSKGQQLTWPMPNGVERTIEIIDI 124

Query: 125 EYQPEAAGDYL 135
             QPE  G+Y 
Sbjct: 125 IDQPERNGEYN 135


>UniRef50_Q3SMM4 GreA/GreB family elongation factor n=1 Tax=Thiobacillus
           denitrificans ATCC 25259 RepID=Q3SMM4_THIDA
          Length = 138

 Score =  133 bits (336), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 62/134 (46%), Positives = 81/134 (60%), Gaps = 1/134 (0%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
           +RP I +++ D ER++ +L       LP A+AL  ELDRA++  PE MP DVVTMNSR++
Sbjct: 5   TRPAITVSERDLERLEDMLAGLPD-DLPGAEALRDELDRAEILRPEAMPADVVTMNSRIR 63

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           F     G+    TLVYP   T S  QL V  P G A+LGL VG  I W+ P G      +
Sbjct: 64  FVVEPAGKEMEMTLVYPRDFTGSPDQLPVTTPAGIAVLGLAVGQEIEWQAPNGQKVGARI 123

Query: 122 LELEYQPEAAGDYL 135
           ++L YQPE AGDY+
Sbjct: 124 VDLAYQPERAGDYM 137


>UniRef50_B2SQJ5 Regulator of nucleoside diphosphate kinase n=8 Tax=Xanthomonadaceae
           RepID=B2SQJ5_XANOP
          Length = 215

 Score =  133 bits (336), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 47/130 (36%), Positives = 73/130 (56%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFR 63
           P+ +++  D  R + LL+ P++   P A AL+ EL RA++  P+++  DVVTM+SR++  
Sbjct: 83  PSTLVSSHDLARREALLDSPSFNKHPAATALSDELGRARVLPPDQIRGDVVTMHSRIECE 142

Query: 64  NLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLE 123
           +   G       V+P +    + ++ V+APVG+AL GL VG  I W  P G    L    
Sbjct: 143 DQLHGGRHTLPPVHPHEADVQHGRICVLAPVGSALGGLSVGQRIDWRTPDGRDLRLRATA 202

Query: 124 LEYQPEAAGD 133
           +  QP AAGD
Sbjct: 203 VHDQPTAAGD 212


>UniRef50_C6X5Q8 Transcription elongation factor n=1 Tax=Flavobacteriaceae bacterium
           3519-10 RepID=C6X5Q8_FLAB3
          Length = 170

 Score =  132 bits (334), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 48/136 (35%), Positives = 71/136 (52%), Gaps = 4/136 (2%)

Query: 4   PTIIINDLDAERIDILLEQPAYAG---LPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
             III   D+ RI   +             A+ L  EL  A++    ++P DVVTMNS V
Sbjct: 36  KQIIITKQDSTRIHKSIMDAKKNNSIKAEDAERLLRELHSAKIVESADIPADVVTMNSVV 95

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
           K    ++  V    +VYP +    + ++S+ +PV AAL+G  V D I W +P G+   + 
Sbjct: 96  KIHFENNKTVTEFKIVYPEQANIKDRKISIFSPVAAALIGYSVNDEIDWIVPSGMTKII- 154

Query: 121 VLELEYQPEAAGDYLL 136
           + E+ YQPEAAGD+ L
Sbjct: 155 IDEIIYQPEAAGDFDL 170


>UniRef50_Q4KB20 Acetyltransferase, GNAT family family n=9 Tax=Bacteria
           RepID=Q4KB20_PSEF5
          Length = 379

 Score =  132 bits (334), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 44/131 (33%), Positives = 71/131 (54%), Gaps = 6/131 (4%)

Query: 6   IIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNL 65
           I I ++D  R++ L+    +   P    L  EL+RA +  P+++  +V+TMNSR   +  
Sbjct: 255 IYITEIDKARLESLI---VFEQGPTIVELEHELERAIVVKPQQVARNVITMNSRALLQLD 311

Query: 66  SDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
              E     LVYP     +  + SV + +GAA+LG + GD+I W +       +E+ ++ 
Sbjct: 312 D--EEIEVALVYPEDADSTAGKHSVYSDIGAAILGYQEGDTIDWRISD-RTRRIEIRKVL 368

Query: 126 YQPEAAGDYLL 136
           YQPEAAGD+ L
Sbjct: 369 YQPEAAGDFHL 379


>UniRef50_A6C278 Nucleoside diphosphate kinase regulator protein, putative n=1
           Tax=Planctomyces maris DSM 8797 RepID=A6C278_9PLAN
          Length = 137

 Score =  132 bits (334), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 49/135 (36%), Positives = 71/135 (52%), Gaps = 4/135 (2%)

Query: 1   MSRPTIIINDLDAERIDILLEQ---PAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMN 57
           M +  I I   D +R+  LL      A    P    L+AEL  A +   EE+P D+VTMN
Sbjct: 1   MPQQKIFITKTDYQRLQNLLLSDFTQAIGNKPYLSGLHAELAVAHIVESEEIPADIVTMN 60

Query: 58  SRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVAT 117
           S V+ R+L   E+   TLVYP        +LS++ P+G A+LG R+GD +      G + 
Sbjct: 61  STVRLRDLETDELETYTLVYPQDANIKEGKLSILTPIGTAILGYRIGDQLRSRALAGGS- 119

Query: 118 HLEVLELEYQPEAAG 132
            + V E+ +QPE +G
Sbjct: 120 KIRVEEILFQPERSG 134


>UniRef50_Q74EX3 Nucleoside diphosphate kinase regulator protein, putative n=1
           Tax=Geobacter sulfurreducens RepID=Q74EX3_GEOSL
          Length = 135

 Score =  132 bits (333), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 72/134 (53%), Gaps = 1/134 (0%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           M    I + + D  R++ +L+   +        L  EL  A +  P+++P +VVTMNSRV
Sbjct: 1   MDTRAIYVTEDDLSRLEEILDTIPFRDRKDLQKLEDELASAMIVDPKDVPPNVVTMNSRV 60

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
           K R+L   +    +LV+P     +  ++S+++P+G A+LG   GD++   +    A  + 
Sbjct: 61  KLRDLRADKEMTISLVFPNDANIAEGKISILSPIGTAILGFGAGDTLDLAVRS-FAKKIR 119

Query: 121 VLELEYQPEAAGDY 134
           + E+ YQP AAG +
Sbjct: 120 IEEVLYQPGAAGSH 133


>UniRef50_A6X582 GreA/GreB family elongation factor n=3 Tax=Rhizobiales
           RepID=A6X582_OCHA4
          Length = 142

 Score =  132 bits (332), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 44/124 (35%), Positives = 72/124 (58%), Gaps = 1/124 (0%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
            +P I+++++D ER+  L    +     IA+ L  ELDRA++   + +P +V+ M S V+
Sbjct: 7   KKPNIVVSEIDYERLMGLATNVSERLEEIAEELMVELDRAKVVPAKRLPQNVIHMGSTVE 66

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           FR+ +DG+ R  TLVYP +   +  ++S++ P+G AL+GL  G SI W    G    L V
Sbjct: 67  FRS-NDGQERRVTLVYPGEADIAQGKISILTPIGTALIGLAPGQSISWTARDGKQHELNV 125

Query: 122 LELE 125
           L + 
Sbjct: 126 LSVS 129


>UniRef50_C0N448 Putative uncharacterized protein n=1 Tax=Methylophaga thiooxidans
           DMS010 RepID=C0N448_9GAMM
          Length = 137

 Score =  131 bits (331), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 41/135 (30%), Positives = 68/135 (50%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           + +P I +  LD  R++ L+        P+  +L  EL+RA++    ++P D+V+MNS V
Sbjct: 2   IHQPDIYVASLDLIRLEDLINTLWNKHSPVRLSLEDELERAKIIDSFQLPDDIVSMNSTV 61

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
           +            TLVYP  M    + LS+++P+G ALLG++ G+  +W    G      
Sbjct: 62  ELWVTKSDFPVYMTLVYPYGMKKDGSTLSILSPIGTALLGIKQGEEFYWPGRDGRNIKAR 121

Query: 121 VLELEYQPEAAGDYL 135
           +  + YQPE    Y 
Sbjct: 122 LENILYQPERERHYN 136


>UniRef50_C3X2V3 GreA/GreB family elongation factor n=2 Tax=Oxalobacter formigenes
           RepID=C3X2V3_OXAFO
          Length = 140

 Score =  131 bits (331), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 51/124 (41%), Positives = 73/124 (58%), Gaps = 1/124 (0%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
            RP I +   D ER++ +L    Y  +P    L  ELDRA +  PEE+P DV+T+NS  +
Sbjct: 13  ERPPITVTTHDYERLEQMLRNAKYRNIPGMADLQRELDRANVVEPEELPEDVITINSTAR 72

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           F +    +    TLVYP K    + ++SV+APVG+ALLGL  G SI W++PG     L V
Sbjct: 73  FIDDCTNDQYEITLVYPDKADGVS-KISVLAPVGSALLGLSAGQSIPWQVPGRQKLQLRV 131

Query: 122 LELE 125
           L+++
Sbjct: 132 LDVK 135


>UniRef50_A5F052 Regulator of nucleoside diphosphate kinase n=31 Tax=Vibrio
           RepID=A5F052_VIBC3
          Length = 135

 Score =  130 bits (328), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 60/131 (45%), Positives = 83/131 (63%), Gaps = 2/131 (1%)

Query: 5   TIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRN 64
           TI+++  D +RI  L++  A    P  + L  ELDRA +  P EMP DVVTMNS V+F+ 
Sbjct: 6   TIVVSTRDMDRISQLMDNLA-TLSPELEKLEEELDRATVLEPAEMPEDVVTMNSTVRFKF 64

Query: 65  LSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
           L   EV  +TLVYP  +  S   +S+ APVG+ALLGL VG  + W +PGG    LE++++
Sbjct: 65  LGSDEVMEKTLVYPNDVKSSAD-VSIFAPVGSALLGLAVGQQLAWPMPGGTLKTLEIIDI 123

Query: 125 EYQPEAAGDYL 135
            YQPE AG++ 
Sbjct: 124 VYQPERAGEFH 134


>UniRef50_D1SYS0 GreA/GreB family elongation factor n=1 Tax=Acidovorax avenae subsp.
           avenae ATCC 19860 RepID=D1SYS0_9BURK
          Length = 139

 Score =  129 bits (325), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 50/138 (36%), Positives = 69/138 (50%), Gaps = 9/138 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           +  P  ++ DLD  R+  L  +           L   L  A +     +  DVVTMNSRV
Sbjct: 5   LPHPERVLTDLDFARLSKLAARQLPPAS-----LADLLATADVTGSRAVDADVVTMNSRV 59

Query: 61  KFR----NLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVA 116
           +      + +DG  +V TL YP     +  ++SV++PVG +LLGLRVGD   W  P G  
Sbjct: 60  ELEGSGTDGADGARQVLTLCYPQDADAAAGRVSVLSPVGCSLLGLRVGDVAAWRTPQGED 119

Query: 117 THLEVLELEYQPEAAGDY 134
               V  + +QPEAAGDY
Sbjct: 120 CRATVAAILHQPEAAGDY 137


>UniRef50_A6GQE5 Nucleoside diphosphate kinase regulator n=1 Tax=Limnobacter sp.
           MED105 RepID=A6GQE5_9BURK
          Length = 122

 Score =  129 bits (324), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 48/128 (37%), Positives = 64/128 (50%), Gaps = 7/128 (5%)

Query: 8   INDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSD 67
           +N+LD  RI  L         P    LNA LD A+   P+++P DVVTMNS         
Sbjct: 1   MNELDLARISKL-------NAPFPPELNAALDNAEFIKPQDIPADVVTMNSLFTIVETES 53

Query: 68  GEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQ 127
           G      L YP+    +   +SV++PVGA+LLG + G    W  P G      V E+ +Q
Sbjct: 54  GSTNKLMLCYPSDAEPAKGYISVLSPVGASLLGRKAGTVAQWATPNGEQHFAVVKEILFQ 113

Query: 128 PEAAGDYL 135
           PEA+GDY 
Sbjct: 114 PEASGDYT 121


>UniRef50_B3PF63 Regulator of nucleoside diphosphate kinase n=1 Tax=Cellvibrio
           japonicus Ueda107 RepID=B3PF63_CELJU
          Length = 180

 Score =  128 bits (323), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 44/121 (36%), Positives = 77/121 (63%), Gaps = 3/121 (2%)

Query: 5   TIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRN 64
           +++I++ D +R+  L+E       P A+AL+ E+ RA + +  ++P DVV M+S V F +
Sbjct: 60  SLVISNSDYQRLVQLIE---DNDSPAAEALDIEIGRATLVADAQLPADVVAMDSEVTFED 116

Query: 65  LSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
           L  GE +   LV+PA+      ++S+++PVG+AL+GLR+G SI W +P G    L+V+ +
Sbjct: 117 LDSGEQKTIQLVFPAQANVDQLKISILSPVGSALIGLRIGSSIDWPVPQGKVRRLKVIAV 176

Query: 125 E 125
           +
Sbjct: 177 K 177


>UniRef50_A1TUC9 GreA/GreB family elongation factor n=4 Tax=Burkholderiales
           RepID=A1TUC9_ACIAC
          Length = 136

 Score =  127 bits (320), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 48/128 (37%), Positives = 70/128 (54%), Gaps = 5/128 (3%)

Query: 7   IINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLS 66
           ++ DLD  R+  L  Q      P   +L   L+ A + S   +  DVVTM SRV+  + +
Sbjct: 12  VLTDLDFARLSRLASQQ-----PAPPSLADLLENADVTSSRTVEADVVTMYSRVELVDTA 66

Query: 67  DGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
            G  +V T+ YP     +   +SV++PVG++LLGLRVG +  W  P G A    V  +++
Sbjct: 67  TGARQVLTICYPRDADLAAGFVSVLSPVGSSLLGLRVGQTARWCTPRGEACEATVAGIQH 126

Query: 127 QPEAAGDY 134
           QPEA GDY
Sbjct: 127 QPEAEGDY 134


>UniRef50_A5VGM9 GreA/GreB family elongation factor n=1 Tax=Sphingomonas wittichii
           RW1 RepID=A5VGM9_SPHWW
          Length = 137

 Score =  126 bits (316), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 42/130 (32%), Positives = 67/130 (51%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
            RP I + D +A+ +  L    A     ++  L  EL RA +   + +P D+VTM+S V+
Sbjct: 8   RRPPIHMIDSEADILADLATSAATRLPQVSQLLLEELGRATIHKADRIPGDIVTMHSVVQ 67

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           F + + G+     LVYP     +  ++S++ PVGA L+GLR G SI W    G    L +
Sbjct: 68  FTDAASGKEHRYQLVYPKDADIAEGRISILTPVGAGLIGLRAGQSILWPDRDGHERLLTI 127

Query: 122 LELEYQPEAA 131
            ++  +  AA
Sbjct: 128 AKVSRESLAA 137


>UniRef50_C6VSR5 GreA/GreB family elongation factor n=2 Tax=Sphingobacteriales
           RepID=C6VSR5_DYAFD
          Length = 134

 Score =  125 bits (314), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 31/125 (24%), Positives = 62/125 (49%), Gaps = 1/125 (0%)

Query: 5   TIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRN 64
            +I+   D + +    +           +L  EL+RA +    E+P   + +NS VK R 
Sbjct: 7   PVILGKDDFKLLKQFAQTFPDNNSSETMSLAYELNRAVVVEDNELPAGSIRLNSYVKVRE 66

Query: 65  LSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
            +  +    ++V P     +  ++S++ P+GAAL+GL  G+++ W++P G     ++L++
Sbjct: 67  TTTNKEMAFSIVMPKDADIAKQRISILTPMGAALIGLCKGETVEWKMPAG-IRRFKILDV 125

Query: 125 EYQPE 129
            Y  E
Sbjct: 126 WYDQE 130


>UniRef50_B8IFL5 GreA/GreB family elongation factor n=8 Tax=Methylobacterium
           RepID=B8IFL5_METNO
          Length = 141

 Score =  124 bits (312), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 44/123 (35%), Positives = 65/123 (52%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKF 62
           +P I +   D ER+  L          +A  L  ELDRAQ+ +        V M  +V+F
Sbjct: 14  KPRIKMTVEDHERLSALAAAAQDRMPDVASCLADELDRAQIVAGRGRLPPFVRMGCQVEF 73

Query: 63  RNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVL 122
           R+ + G V++ TLVYP +      ++SV+ P+GAAL+GL  G SI WE   G+   L VL
Sbjct: 74  RDDTTGRVQIVTLVYPGEANIEQGKISVLTPIGAALIGLSTGQSITWETRSGLTKSLTVL 133

Query: 123 ELE 125
           ++ 
Sbjct: 134 DVR 136


>UniRef50_B9KH08 Transcription elongation factor n=9 Tax=Rickettsiales
           RepID=B9KH08_ANAMF
          Length = 174

 Score =  124 bits (311), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 31/137 (22%), Positives = 54/137 (39%), Gaps = 12/137 (8%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIAD--------ALNAELDRAQMCSPEEMPHDV 53
            RP II +  DA  +  L E   Y                L ++  RA++    E+  D 
Sbjct: 37  ERPKIIKSISDARELGDLSENAEYHAARERQGLVESKIMELESKRSRAEVIDVSELSGDT 96

Query: 54  VTMNSRVKF----RNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHW 109
           V   + V             V    +V   +   S   +S+ +P+  +LLG R GDS+  
Sbjct: 97  VMFGATVTVSVYDEQTDSTGVMQYQIVGEYEADVSKNMISIKSPLVLSLLGRREGDSVEV 156

Query: 110 ELPGGVATHLEVLELEY 126
           + P G     +++++E+
Sbjct: 157 KTPRGDYKIYQIMKIEF 173


>UniRef50_Q3SU57 GreA/GreB family elongation factor n=9 Tax=Bradyrhizobiaceae
           RepID=Q3SU57_NITWN
          Length = 151

 Score =  123 bits (310), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 43/139 (30%), Positives = 66/139 (47%), Gaps = 11/139 (7%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPE----------EMPHDV 53
           P I I+  D +R+  L E         A+ L  E+DRA++   +              ++
Sbjct: 11  PAIAISAHDIDRLRHLAEAAIEKYPATAEFLAREIDRAEIIPADGSLLDDTRDQRWKVNL 70

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           VTM S V F +   G+ R  TLVYP        ++S+++P+GAAL+GL  G SI ++ P 
Sbjct: 71  VTMQSEVTFIDDVSGQKRRVTLVYPEDADVDAGKISILSPIGAALIGLSAGQSIEFQTPS 130

Query: 114 GVATHLEVLEL-EYQPEAA 131
           G    L V+ +  Y P   
Sbjct: 131 GGWRSLTVIAVWSYWPRPE 149


>UniRef50_A5V983 GreA/GreB family elongation factor n=1 Tax=Sphingomonas wittichii
           RW1 RepID=A5V983_SPHWW
          Length = 166

 Score =  123 bits (310), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 43/130 (33%), Positives = 66/130 (50%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
            RP I + D +AE +  +          +++ L  E+DRA +     +P DVVTM+S V+
Sbjct: 37  RRPAIHMIDSEAETLANMAVAAEERIPQVSELLLEEIDRATLYKAARIPADVVTMHSHVE 96

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           F + ++G  R   LVYP        ++S++  VGA L+GLR G SI W    G    L +
Sbjct: 97  FVDEANGTSRTVQLVYPKDADIDAGRVSILTLVGAGLIGLREGQSILWPGRDGHRRLLTI 156

Query: 122 LELEYQPEAA 131
             +  + EAA
Sbjct: 157 TRVSREAEAA 166


>UniRef50_Q5P744 Transcription elongation factor n=3 Tax=Proteobacteria
           RepID=Q5P744_AZOSE
          Length = 158

 Score =  122 bits (307), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 47/127 (37%), Positives = 69/127 (54%), Gaps = 9/127 (7%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           M+   +I+ D D  R+  +              L AEL+RA +  P+ +P  VVTM+SRV
Sbjct: 34  MNSEHLILTDNDFVRLMAM---------QPGPQLRAELERAVVVPPDFLPRHVVTMHSRV 84

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
           ++ + + GE R   +VYP +   +  ++SV APVGAALLGL V   I W+ P G    L 
Sbjct: 85  RYLDEASGEQREIQVVYPEEADVAAGKVSVFAPVGAALLGLSVDQVIEWDFPRGPRRRLR 144

Query: 121 VLELEYQ 127
           V E+ +Q
Sbjct: 145 VEEVLHQ 151


>UniRef50_P64276 Transcription elongation factor greA n=48 Tax=delta/epsilon
           subdivisions RepID=GREA_HELPJ
          Length = 164

 Score =  120 bits (302), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 32/136 (23%), Positives = 61/136 (44%), Gaps = 11/136 (8%)

Query: 1   MSRPTIIINDLDAER-IDILLEQPAYAGLPIADA--------LNAELDRAQMCSPEEMPH 51
           + RP I + ++D  R    L E   Y                L+  +  AQ+  P  + H
Sbjct: 24  VERPNI-VKEIDIARGHGDLKENAEYHAAKEKQRFIEARIVDLSEIVANAQVIDPSALAH 82

Query: 52  DVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWEL 111
           + V+  S +K  NL + +    T+V   +   +   +S  +P+  +L+G   GD++  +L
Sbjct: 83  NKVSFGSTIKILNLDNDKEFSYTIVGSVESDPAKGLISFGSPIAKSLIGKSKGDAVSIQL 142

Query: 112 PGGVATHLEVLELEYQ 127
           P G +   E+L++ Y+
Sbjct: 143 PNGES-DFEILDIYYK 157


>UniRef50_A8LN19 GreA/GreB family elongation factor n=8 Tax=Alphaproteobacteria
           RepID=A8LN19_DINSH
          Length = 148

 Score =  120 bits (302), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 47/132 (35%), Positives = 66/132 (50%), Gaps = 2/132 (1%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
            RP I+IN  D   I+ L E        +AD L  E+ RA++    +MP +V+ +     
Sbjct: 17  RRPRIVINADDLSHIEALAEGAMDRNPALADRLLEEIARARIVPAAKMPLNVIGIGKSAT 76

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           FR+ + G+ R  TLVYP     S  ++SVM P+G ALLGL  G   HW   G     L V
Sbjct: 77  FRDETTGQERTVTLVYPEDADISRARVSVMTPIGVALLGLAEGAVFHWNTRGEERRMLTV 136

Query: 122 LELEYQ--PEAA 131
           + +     PE+A
Sbjct: 137 IRVSDPAAPESA 148


>UniRef50_C6WYK0 GreA/GreB family elongation factor n=2 Tax=Methylophilaceae
           RepID=C6WYK0_METML
          Length = 125

 Score =  120 bits (301), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 42/125 (33%), Positives = 66/125 (52%), Gaps = 9/125 (7%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           M    +I++D D  R+ +L            + L  EL RA +   +++P DVV +NSRV
Sbjct: 2   MEIDKLILSDQDYARLSMLAND---------ELLGDELSRAIVVPADQVPADVVRINSRV 52

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
            + + S G  R   LV+P        ++SV++PVG+ALLGL+ G  I W  P G +  L+
Sbjct: 53  IYLDESSGLSREVELVFPEGADLKFGKISVLSPVGSALLGLKEGQVIDWPFPHGQSRRLK 112

Query: 121 VLELE 125
           V+ + 
Sbjct: 113 VVSVA 117


>UniRef50_A9EFF1 GreA/GreB family elongation factor n=1 Tax=Oceanibulbus indolifex
           HEL-45 RepID=A9EFF1_9RHOB
          Length = 146

 Score =  119 bits (300), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 44/125 (35%), Positives = 71/125 (56%), Gaps = 1/125 (0%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
             P +I+N  D   ++ L E   +    +AD    E+ RAQ+   ++MP DVV + S+V 
Sbjct: 14  RNPHLILNAADLVHLEELAEGMMHRHPTLADRFFEEIGRAQIVEDQQMPGDVVGIGSKVT 73

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATH-LE 120
           +R+ + G+ +  TLVYP     + +Q+SV+ P+G ALLGLR G S +W+       H L 
Sbjct: 74  YRDETTGQNKSVTLVYPEDADITRSQVSVITPIGVALLGLREGASFYWDTRRENQRHMLT 133

Query: 121 VLELE 125
           +L++E
Sbjct: 134 ILKVE 138


>UniRef50_A7IJH2 GreA/GreB family elongation factor n=4 Tax=Rhizobiales
           RepID=A7IJH2_XANP2
          Length = 143

 Score =  119 bits (300), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 45/126 (35%), Positives = 67/126 (53%), Gaps = 3/126 (2%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFR 63
           P ++++  D ER+  L          +A+ L AELDRA++     +P   V M S+V + 
Sbjct: 16  PALVLSHPDHERLAGLATAALDRIPDVAEELLAELDRARLVPIGRVPATAVQMGSKVTYE 75

Query: 64  NLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLE 123
             + G  R  TLVYP     +  ++SVM P+GAAL+GL  G SI W    G    L+V+E
Sbjct: 76  --AGGNARTVTLVYPEDADIAAARVSVMTPIGAALIGLSKGQSICWTARDGRRHELKVIE 133

Query: 124 LEYQPE 129
           ++  PE
Sbjct: 134 VQ-PPE 138


>UniRef50_B4RF21 Transcription elongation factor n=2 Tax=cellular organisms
           RepID=B4RF21_PHEZH
          Length = 214

 Score =  119 bits (300), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 42/126 (33%), Positives = 61/126 (48%), Gaps = 4/126 (3%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
             PT+ + + D +R+  L +       P A+ L  ELDRA +    E     V + S V+
Sbjct: 93  RTPTVRVAEADYDRLLNLAD----HDGPGAELLARELDRAIVVREGEKSRPFVRLGSTVE 148

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           +R+    +VR   LV P        +LSV++PVGAALLGL VGD+  W  P G    + V
Sbjct: 149 YRDRLTEKVRTVELVPPDAADIDANRLSVLSPVGAALLGLSVGDTFSWTAPDGRPRVVTV 208

Query: 122 LELEYQ 127
             +   
Sbjct: 209 EAVRRD 214


>UniRef50_A8HR94 Transcription elongation factor greA n=5 Tax=Proteobacteria
           RepID=GREA_AZOC5
          Length = 157

 Score =  119 bits (299), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 30/134 (22%), Positives = 55/134 (41%), Gaps = 9/134 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHD 52
           + RP II    +A     L E   Y                L  ++ RA++    ++  D
Sbjct: 24  VERPRIISAISEARAHGDLSENAEYHAAKELQSLNEGRIAELEDKISRAEVIDVSKLSGD 83

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
           +V   + V   +    E RV  +V  ++      ++S+ +PV  AL+G + G S+    P
Sbjct: 84  IVKFGATVTLVDEDTEEERVWQIVGDSEADAKAGRISISSPVARALIGKKKGSSVEVVTP 143

Query: 113 GGVATHLEVLELEY 126
            G     E++E+ +
Sbjct: 144 KGA-RSFEIVEVRW 156


>UniRef50_Q0A765 Transcription elongation factor greA n=23 Tax=Proteobacteria
           RepID=GREA_ALHEH
          Length = 158

 Score =  119 bits (298), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 30/135 (22%), Positives = 50/135 (37%), Gaps = 10/135 (7%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPH- 51
           + RP II    +A     L E   Y                +  +L  AQ+  P  +   
Sbjct: 24  VERPRIIQAIAEAREHGDLKENAEYHAAREQQSFVEGRIQEIEGKLSNAQVIDPAAVNAQ 83

Query: 52  DVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWEL 111
             V   + V   +   G+     +V   +       +SV +P+  AL+G   GD +  + 
Sbjct: 84  GKVIFGATVDLVDEDSGKEVTYQIVGEDEADIKQGLVSVNSPIARALIGKEEGDLVTVQA 143

Query: 112 PGGVATHLEVLELEY 126
           PGG     E++E+ Y
Sbjct: 144 PGGE-REYEIVEVRY 157


>UniRef50_B0T7C4 GreA/GreB family elongation factor n=1 Tax=Caulobacter sp. K31
           RepID=B0T7C4_CAUSK
          Length = 139

 Score =  118 bits (296), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 43/130 (33%), Positives = 70/130 (53%), Gaps = 1/130 (0%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           ++RP II+ + +A+R+  L  +   A    AD L  E++RA++ +  +MP  VV M S V
Sbjct: 8   VARPDIILAETEADRLSALATRLRDAAPQAADLLLEEIERAEIRADLDMPRTVVRMESVV 67

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
           +F + + G  R   LVYP     +  ++SV++ VGA L+GL    +I W    G    L 
Sbjct: 68  QFVDEAHGNPRTVLLVYPRDADIAAGKVSVLSFVGAGLIGLSPHQAIQWPDRNGRQRTLR 127

Query: 121 VLELEYQPEA 130
           +L++   PE 
Sbjct: 128 ILKVR-PPER 136


>UniRef50_Q98F06 Nucleoside diphosphate kinase regulator n=2 Tax=Mesorhizobium
           RepID=Q98F06_RHILO
          Length = 140

 Score =  117 bits (295), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 40/125 (32%), Positives = 60/125 (48%), Gaps = 3/125 (2%)

Query: 2   SRP--TIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSR 59
            RP   I+I+D D +R+  L           A+ L  E+DRA +     MP DVV M S 
Sbjct: 7   PRPSSRILISDTDHDRLTGLARALLDRAPETAEELLFEMDRAVVTDAAAMPADVVRMGSA 66

Query: 60  VKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHL 119
           V  R    G  +   LVYP +   +  ++SV+ P+G AL+G  +G ++ W   GG    +
Sbjct: 67  VTVR-GEGGATQRIMLVYPGEADIAENRISVLTPMGTALIGASIGQAVCWSSRGGRELSV 125

Query: 120 EVLEL 124
            V  +
Sbjct: 126 TVEAV 130


>UniRef50_A7HFE1 GreA/GreB family elongation factor n=1 Tax=Anaeromyxobacter sp.
           Fw109-5 RepID=A7HFE1_ANADF
          Length = 164

 Score =  117 bits (295), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 45/140 (32%), Positives = 71/140 (50%), Gaps = 8/140 (5%)

Query: 5   TIIINDLDAERIDILLEQPA--------YAGLPIADALNAELDRAQMCSPEEMPHDVVTM 56
            +++ + DA R+   L + +          G    + L   L  A +  P+ +P +VVTM
Sbjct: 25  RLLLTEQDAARLRATLARASLESMASADARGENAVELLATALRSAIVVPPDRIPAEVVTM 84

Query: 57  NSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVA 116
            SR+   +++ G  R   LVYP +       +SV++PVG ALLGL  G  + W LP G  
Sbjct: 85  RSRLVLEDVASGARREVVLVYPEEERTHEGHVSVLSPVGVALLGLSEGALVGWPLPSGRT 144

Query: 117 THLEVLELEYQPEAAGDYLL 136
             L+V  ++YQPEA  ++ L
Sbjct: 145 AVLQVESVQYQPEAVEEFHL 164


>UniRef50_B3E3H5 Transcription elongation factor greA n=19 Tax=Proteobacteria
           RepID=GREA_GEOLS
          Length = 158

 Score =  117 bits (294), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 30/134 (22%), Positives = 55/134 (41%), Gaps = 9/134 (6%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHDV 53
            RP +I +  +A     L E   Y                L  +L RA +     +  D 
Sbjct: 26  ERPKVIQDIAEARSHGDLSENAEYDAAKNRQGFIEGRIQELQGKLARAHVVDLTGLKPDK 85

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           V   + V   + +  E     +V   +      ++S  +PVG AL+G ++ DS+  ++P 
Sbjct: 86  VVFGATVTLYDTASEEEITYKIVGEDEADIKLGKISCTSPVGKALIGHKLDDSVKVKVPA 145

Query: 114 GVATHLEVLELEYQ 127
           G     E++E++Y+
Sbjct: 146 GT-KEYEIIEIKYE 158


>UniRef50_Q057J4 Transcription elongation factor greA n=20 Tax=Proteobacteria
           RepID=GREA_BUCCC
          Length = 159

 Score =  117 bits (293), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 30/135 (22%), Positives = 57/135 (42%), Gaps = 10/135 (7%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIAD--------ALNAELDRAQMCSPEEMP-H 51
           ++RP I+    +A ++  L E   Y                +  +L RAQ+    ++P  
Sbjct: 25  ITRPCIVKAIANARQLGDLKENAEYHSAREEQSFCENRICEIENKLLRAQIIDITKIPFK 84

Query: 52  DVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWEL 111
            +V   S V    +S   + V T+V   +       +S+ +P+  AL+G +  D I    
Sbjct: 85  GIVIFGSTVTVLQISTSNIFVYTIVGDDEANYKEFSISIHSPMSRALIGKKKNDIIKVNT 144

Query: 112 PGGVATHLEVLELEY 126
           P G   ++ + ++EY
Sbjct: 145 PTGYIKYI-IKKIEY 158


>UniRef50_Q1LSK1 Transcription elongation factor greA n=16 Tax=Proteobacteria
           RepID=GREA_BAUCH
          Length = 158

 Score =  117 bits (293), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 30/135 (22%), Positives = 56/135 (41%), Gaps = 10/135 (7%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEM-PH 51
           + RP II N  +A     L E   Y                + ++L  AQ+    ++ P 
Sbjct: 24  VRRPEIIRNIAEAREYGDLKENAEYHAAREQQGFCEGRIQEIESKLSHAQIIDVTKLFPS 83

Query: 52  DVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWEL 111
             V     V  +NL+  E +   +V   +    +  +S+ +P+   L+G + GD +  + 
Sbjct: 84  GKVVFGVTVSVQNLNINEEQTYRIVGDDEANFKHNLISISSPIARGLIGKKKGDIVLIKT 143

Query: 112 PGGVATHLEVLELEY 126
           P G     ++L++EY
Sbjct: 144 PRGE-VKYQILKIEY 157


>UniRef50_B2S6W5 Transcription elongation factor greA n=39 Tax=Bacteria
           RepID=GREA_BRUA1
          Length = 157

 Score =  116 bits (292), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 53/133 (39%), Gaps = 9/133 (6%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIAD--------ALNAELDRAQMCSPEEMPHDV 53
            RP II    +A     L E   Y     A          L   + RA++    ++  D 
Sbjct: 25  ERPRIIEAIAEARAHGDLSENAEYHAAKEAQSLNEGRINELEDLVARAEVIDVSKLTGDR 84

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           +   + V   +    E ++  +V   +      ++S+ +P+  AL+G   GD+I    PG
Sbjct: 85  IKFGATVTMIDEDTEEEKIYQIVGDQEADVKEGRISISSPIARALIGKGEGDTIEVNAPG 144

Query: 114 GVATHLEVLELEY 126
           G     E++ L++
Sbjct: 145 GS-RSYEIIALKF 156


>UniRef50_A1U1V6 GreA/GreB family elongation factor n=2 Tax=Marinobacter
           RepID=A1U1V6_MARAV
          Length = 128

 Score =  116 bits (291), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 53/125 (42%), Positives = 75/125 (60%), Gaps = 1/125 (0%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFR 63
           P I +++ D  R+  LLE+ A     +AD L  EL RA M    +MP  VVTMNSRV+F 
Sbjct: 5   PHITVSEEDYNRLSTLLERVAGQSD-VADGLEDELSRADMKPLADMPEGVVTMNSRVRFL 63

Query: 64  NLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLE 123
           N   GE     LVYP ++ D++ ++S++AP GAA+LGL +G SI W + G    HL+V+ 
Sbjct: 64  NEDTGEEHEVALVYPHEVGDADHKVSILAPAGAAMLGLSIGSSIEWPMKGRKPIHLKVIG 123

Query: 124 LEYQP 128
           +   P
Sbjct: 124 VTRNP 128


>UniRef50_B7L307 GreA/GreB family elongation factor n=1 Tax=Methylobacterium
           chloromethanicum CM4 RepID=B7L307_METC4
          Length = 147

 Score =  116 bits (291), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 47/131 (35%), Positives = 67/131 (51%), Gaps = 2/131 (1%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLP--IADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           RP +II   D   +  +      +     +   L  ELDRA +  P  +P  VVTM++RV
Sbjct: 10  RPPLIIPMSDFRFLREIAAGTGVSQARGSVVAWLAEELDRATVVPPGAVPPRVVTMHARV 69

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
           ++R+    +VR  TL YP +     + +SV+ PVGAAL+GL  G SI W  P G    L 
Sbjct: 70  EYRDDVTDQVRCVTLTYPGEEDAYASGISVLTPVGAALVGLSEGHSIRWRTPSGGLRGLT 129

Query: 121 VLELEYQPEAA 131
           VL + + P  A
Sbjct: 130 VLRVRFAPHHA 140


>UniRef50_Q4HT85 Transcription elongation factor n=1 Tax=Campylobacter upsaliensis
           RM3195 RepID=Q4HT85_CAMUP
          Length = 161

 Score =  116 bits (290), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 36/135 (26%), Positives = 56/135 (41%), Gaps = 11/135 (8%)

Query: 3   RPTIIINDLDAERI-DILLEQPAYAGLPIADALNA--------ELDRAQMCSPEEMPHDV 53
           RP +++ ++D  R    L E   Y       AL           L RAQ+  P    H+ 
Sbjct: 26  RPAVVV-EIDVARSHGDLKENAEYHAAREKQALIESRIAELGGILSRAQVIDPASYEHES 84

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           V   S V   +L   +    TLV   +       +S+ +P+  A+LG + GD     LP 
Sbjct: 85  VKFGSSVLIMDLESEKESKYTLVGTCESDLEKGYISIASPLARAMLGKKEGDEFKVRLPK 144

Query: 114 GVATHLEVLELEYQP 128
           G +   E+L + Y+P
Sbjct: 145 GES-EFEILSVTYEP 158


>UniRef50_Q7UVA0 Transcription elongation factor greA n=3 Tax=Planctomycetaceae
           RepID=GREA_RHOBA
          Length = 159

 Score =  116 bits (290), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 54/131 (41%), Gaps = 9/131 (6%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHDVVT 55
           P I+    +A     L E   Y              + L  ++ RA +     +P D V 
Sbjct: 28  PMIVQKIAEAREEGDLKENAEYHAQRENQGMLMAKINELRDKIARASIIDVSSLPKDEVV 87

Query: 56  MNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGV 115
               V   +++ G+    TLV        + ++ V +P G  L+G +VG++   ++P G 
Sbjct: 88  FGCTVTVEDVAYGDEEQFTLVGAGDEDYDSGKILVTSPFGQGLVGKKVGETAEVDVPAG- 146

Query: 116 ATHLEVLELEY 126
               ++L++E+
Sbjct: 147 KLKFKILKIEF 157


>UniRef50_D2R891 Transcription elongation factor GreA n=1 Tax=Pirellula staleyi DSM
           6068 RepID=D2R891_9PLAN
          Length = 164

 Score =  115 bits (289), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 34/132 (25%), Positives = 56/132 (42%), Gaps = 9/132 (6%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLPIADAL--------NAELDRAQMCSPEEMPHDVVT 55
           P I     DA     L E   Y     A  L          +L +A +  P  MP D V+
Sbjct: 28  PDITQKIADARAEGDLKENAEYHAQREAQGLLQAKINLIRNKLSKASIIDPSTMPRDQVS 87

Query: 56  MNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGV 115
             + V  +++   E    TLV   +   +  ++ + +P+G AL+G ++GD +    P G 
Sbjct: 88  FGTTVLVKDIDMDEEEEFTLVGAGEEDYNAGRILITSPLGQALVGKKIGDVVDVPAPKGS 147

Query: 116 ATHLEVLELEYQ 127
              LE+L L++ 
Sbjct: 148 YQ-LEILTLKFD 158


>UniRef50_Q1H282 GreA/GreB family elongation factor n=2 Tax=Proteobacteria
           RepID=Q1H282_METFK
          Length = 165

 Score =  115 bits (288), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 51/125 (40%), Gaps = 7/125 (5%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
            R  + +   D      L              L A L+ A +  P   P D V   + V+
Sbjct: 48  ERQPLTMRKDDPAVQQRLA-----MIDRDLRYLQARLESAIVVDPATQPTDTVLFGATVE 102

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
             +  +G      +V   +   +  ++S ++P+  AL+G ++GDS+ W  P G    LE+
Sbjct: 103 VED-ENGNSHTFMIVGEDEADIATNRVSWVSPLAKALIGQKIGDSVTWHRPAG-NLELEI 160

Query: 122 LELEY 126
           + + Y
Sbjct: 161 IAIHY 165


>UniRef50_C6XWY5 Transcription elongation factor GreA/GreB domain protein n=1
           Tax=Pedobacter heparinus DSM 2366 RepID=C6XWY5_PEDHD
          Length = 125

 Score =  114 bits (285), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 40/124 (32%), Positives = 65/124 (52%), Gaps = 2/124 (1%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           M   ++ ++  D + +   LE+   +     + L AEL  A + + EE+P DVV + S  
Sbjct: 1   METKSLSLSKSDFKLLKEHLEKSNMSAYNK-EKLQAELKAATIYTEEELPSDVVCLKSEA 59

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
           +  N+  G+     LV P +      ++SV AP+G AL G R GDSI+WE+P G     +
Sbjct: 60  RIANVKTGKEFTFKLVMPEEANIKAQKVSVFAPIGIALFGYRTGDSINWEMPDG-IQEFK 118

Query: 121 VLEL 124
           +LE+
Sbjct: 119 ILEV 122


>UniRef50_C0QKN0 Transcription elongation factor n=1 Tax=Desulfobacterium
           autotrophicum HRM2 RepID=C0QKN0_DESAH
          Length = 175

 Score =  114 bits (285), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 34/132 (25%), Positives = 54/132 (40%), Gaps = 9/132 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIAD--------ALNAELDRAQMCSPEEMPHD 52
           + RP  I     A     L E   +                L  ++  A++  P  +  D
Sbjct: 44  IERPQNIKAIEIARAHGDLSENAEFDAAKDRQSFIEGRIGELGYKIASAKIIDPATVSKD 103

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V   SRV   NL  GE     +V   +      ++SV +P+G ALLG + GD I  + P
Sbjct: 104 CVRFASRVVIENLDSGEEVEYMIVGQEESDIHKGKISVSSPLGMALLGKQPGDEIVIQAP 163

Query: 113 GGVATHLEVLEL 124
           GG   + E++++
Sbjct: 164 GG-KRNYEIVDI 174


>UniRef50_B0T793 GreA/GreB family elongation factor n=1 Tax=Caulobacter sp. K31
           RepID=B0T793_CAUSK
          Length = 141

 Score =  113 bits (284), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 38/123 (30%), Positives = 66/123 (53%), Gaps = 1/123 (0%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
           ++PTI + + D E +  L + PA         L  E+ RA +  P + P   V + SR+ 
Sbjct: 18  AQPTIYVTEQDFEILSNLADAPAGRAF-GGRVLAHEMARALIVEPGQAPLPFVRIGSRID 76

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           +R+LS+G+ R   L  P   +  + ++SV++PVGAAL+G+  G + HW    G    ++V
Sbjct: 77  YRDLSNGQTRSVRLSLPRDASIDDNRISVLSPVGAALVGMTAGQAFHWTDAEGRPRGVQV 136

Query: 122 LEL 124
           + +
Sbjct: 137 IAV 139


>UniRef50_Q7VM42 Transcription elongation factor greB n=27 Tax=Proteobacteria
           RepID=GREB_HAEDU
          Length = 162

 Score =  113 bits (284), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 50/134 (37%), Gaps = 10/134 (7%)

Query: 2   SRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMPHDV 53
            RP +  +  +A  +    E   Y                L+  L+  Q+          
Sbjct: 26  ERPKVTQSVSEAAALGDRSENAEYIYGKRRLREIDRRIRFLSKRLEALQIIDYHPQQAGK 85

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           V   + ++  N ++GE+    +V   +   +   +S+ +PV  AL+G  V D I  + P 
Sbjct: 86  VFFGAWIELEN-NEGEINQYRIVGCDEFDPTKNWISIDSPVARALIGKCVDDEIEVQTPT 144

Query: 114 GVATHLEVLELEYQ 127
           G A    + ++ Y 
Sbjct: 145 GKAVFY-INKIWYD 157


>UniRef50_A7HAZ2 GreA/GreB family elongation factor n=5 Tax=Myxococcaceae
           RepID=A7HAZ2_ANADF
          Length = 138

 Score =  113 bits (283), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 51/123 (41%), Positives = 70/123 (56%), Gaps = 3/123 (2%)

Query: 2   SRPTIIINDLDAERIDILLE-QPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           +R  I +   D +R+  L++   A      A+ L+AELDRA     E  P D+VTMN+RV
Sbjct: 3   ARKPIHVTHADLDRLRALVDQHLAGRDARAAEQLDAELDRA--VPIEVAPPDLVTMNARV 60

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
            F +L+ G  R   LVYP     +  ++SV+AP+GAALLGL VG+ I W LP G    L 
Sbjct: 61  AFVDLASGVRRELVLVYPRDADVAAGRVSVLAPIGAALLGLSVGEEIDWPLPDGRVARLR 120

Query: 121 VLE 123
           +L 
Sbjct: 121 ILS 123


>UniRef50_A6LPL4 Transcription elongation factor greA n=30 Tax=Clostridia
           RepID=GREA_CLOB8
          Length = 160

 Score =  113 bits (283), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 35/134 (26%), Positives = 56/134 (41%), Gaps = 9/134 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIAD--------ALNAELDRAQMCSPEEMPHD 52
           + R  I      A     L E   Y                L   L  A +    E+P D
Sbjct: 27  VKRKEITEKIKIALGYGDLSENSEYDEAKNDQAFTEGRIIQLENMLKNAVVVDESEIPSD 86

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
           +V++ S+VK ++    E    ++V  A+    N ++S  +PVG AL+G +VGD +   +P
Sbjct: 87  IVSVGSKVKVKDYEFDEEVEYSIVGSAEADPMNFKISNESPVGNALVGKKVGDVVEVTVP 146

Query: 113 GGVATHLEVLELEY 126
            GV    E+L +  
Sbjct: 147 DGVN-KFEILGISR 159


>UniRef50_A4BB58 Nucleoside diphosphate kinase regulator n=1 Tax=Reinekea blandensis
           MED297 RepID=A4BB58_9GAMM
          Length = 142

 Score =  112 bits (282), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 48/128 (37%), Positives = 74/128 (57%), Gaps = 3/128 (2%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
            +P + I++ D +R+  L+           D L +ELDRA +C P E+P D V + S V+
Sbjct: 4   PKPDVFISEHDWQRLQRLVAHYPDHEA--IDWLESELDRATVCLPNELPADAVQLGSVVR 61

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           F+  S G+V +R LV P +    +  +SV++PVG ALLGLRVGD I W    G +T + +
Sbjct: 62  FQLSSSGQVYLRELVLP-EQRQHDEHISVLSPVGMALLGLRVGDEIAWPSSPGQSTTVRI 120

Query: 122 LELEYQPE 129
           L+++   E
Sbjct: 121 LDVKQDRE 128


>UniRef50_Q2GA51 GreA/GreB family elongation factor n=1 Tax=Novosphingobium
           aromaticivorans DSM 12444 RepID=Q2GA51_NOVAD
          Length = 159

 Score =  112 bits (281), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 44/122 (36%), Positives = 69/122 (56%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKF 62
           RP II+ D +A+ +  L    +     I+  L  E+ RAQ+   +++P D V M S V+F
Sbjct: 30  RPQIILIDSEADALADLALAASDRLPEISRMLMEEIGRAQIVPAQDLPPDAVAMRSVVRF 89

Query: 63  RNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVL 122
           R+ + G VR  TLVYPA+   +  ++S++ PVGA L+GLR G SI W    G    + + 
Sbjct: 90  RDEATGAVRTVTLVYPAEADIAQDRVSILTPVGAGLIGLRAGQSIDWPNVRGKQRAITIE 149

Query: 123 EL 124
           ++
Sbjct: 150 QV 151


>UniRef50_Q725M4 Transcription elongation factor greA n=4 Tax=Desulfovibrionaceae
           RepID=GREA_DESVH
          Length = 163

 Score =  112 bits (281), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 33/133 (24%), Positives = 54/133 (40%), Gaps = 9/133 (6%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIAD-ALNAELDRAQ-------MCSPEEMPHDV 53
            RP +I    +A     L E   Y         L A +   +       +   + +  D 
Sbjct: 24  ERPGVIQAIKEAREEGDLSENAGYDAARERQGMLEARIKYIESRMAQFNVIDLDTISGDK 83

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           V   + VK  +L  GE +  TL+ P +   +   +SV +PV  A+LG   GD I  + P 
Sbjct: 84  VMFGATVKIEDLESGEEKEYTLLGPDEADYAKGSISVQSPVARAMLGKEEGDEIVVDAPR 143

Query: 114 GVATHLEVLELEY 126
           G   H E++ + +
Sbjct: 144 GKI-HYEIVSIRF 155


>UniRef50_A8F083 Transcription elongation factor greA n=13 Tax=Rickettsia
           RepID=GREA_RICCK
          Length = 162

 Score =  111 bits (279), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 51/135 (37%), Gaps = 9/135 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHD 52
           + R  I  +  +A     L E   Y                L     RA++    ++  D
Sbjct: 25  VERKKISEDIAEAREHGDLSENAEYEAAREKQAFIEGRIKELEDMAARAEIIDISKLSGD 84

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            +   + V   +    E     +V   +   +  ++S+ +P+  AL+G  VGD +    P
Sbjct: 85  NIKFGATVTLIDDDTEEKVTYIVVGEYEADITRKRVSIASPIAKALIGKSVGDFVEVTTP 144

Query: 113 GGVATHLEVLELEYQ 127
            G     EV+E+EY+
Sbjct: 145 KGS-KSYEVVEVEYK 158


>UniRef50_A3ESJ0 Transcription elongation factor n=4 Tax=Bacteria RepID=A3ESJ0_9BACT
          Length = 160

 Score =  111 bits (279), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 32/133 (24%), Positives = 53/133 (39%), Gaps = 9/133 (6%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHDVV 54
           RP  I +  +A     L E   Y                L A++  A + S     H  +
Sbjct: 26  RPKNIQDIAEARAHGDLSENAEYHAAKERQGFINSRIKELEAKIASAIVVSSAHQDHSRI 85

Query: 55  TMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGG 114
           T  + V+   L   E +  TLV   +      ++SV +PVG AL+G   G+++   +P G
Sbjct: 86  TFGATVRLVPLDSKEEKRYTLVGQEEADLKAGRISVHSPVGKALIGHSEGETVTIRVPAG 145

Query: 115 VATHLEVLELEYQ 127
                 + E+ Y+
Sbjct: 146 EVQ-YTIAEIFYE 157


>UniRef50_Q04EK0 Transcription elongation factor greA n=4 Tax=Bacilli
           RepID=GREA_OENOB
          Length = 162

 Score =  111 bits (278), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 31/132 (23%), Positives = 54/132 (40%), Gaps = 8/132 (6%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIAD--------ALNAELDRAQMCSPEEMPHDV 53
            RP I     +A     L E   Y                L   +  AQ+        +V
Sbjct: 28  KRPAITSRIQEARSFGDLSENSEYQSAKDEQAFVEGRVKQLQQMIQFAQVIDASSASKNV 87

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           VT+  ++ F+ + DG+    T+V  A+    + ++S  +P+G ALL  + GD +   LP 
Sbjct: 88  VTLGKKISFKEVPDGDEETYTIVGSAESDPLSGKISNDSPMGKALLDHKTGDKVEIPLPE 147

Query: 114 GVATHLEVLELE 125
             +  +E+L + 
Sbjct: 148 NHSVTVEILHVS 159


>UniRef50_C0A6F4 GreA/GreB family elongation factor n=1 Tax=Opitutaceae bacterium
           TAV2 RepID=C0A6F4_9BACT
          Length = 148

 Score =  111 bits (278), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 41/132 (31%), Positives = 64/132 (48%), Gaps = 8/132 (6%)

Query: 2   SRPTIIINDLDA----ERIDILLEQPAYAGLPIADALNAELDRAQMC-SPEEMPHDVVTM 56
            +  I I+  D      R++++ E            L AE DRA +      MP  VVT+
Sbjct: 3   EQQPIYISRADLLQIRARLNLIAEGR--HDRENLARLRAEFDRALIIEDDTAMPDGVVTL 60

Query: 57  NSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVA 116
           +  V+ ++L   E+   TL  P        ++S++AP+G ALLG +V + + WE+PGG  
Sbjct: 61  HCEVRLQDLDTNEIETYTLTLPEHADPEAHRISILAPIGTALLGYQVDNVVTWEMPGGA- 119

Query: 117 THLEVLELEYQP 128
             L +LE   QP
Sbjct: 120 RRLRILEARRQP 131


>UniRef50_Q930S2 Putative uncharacterized protein n=1 Tax=Sinorhizobium meliloti
           RepID=Q930S2_RHIME
          Length = 140

 Score =  111 bits (278), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 40/121 (33%), Positives = 58/121 (47%), Gaps = 1/121 (0%)

Query: 7   IINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLS 66
            I   D   +  L  Q       IA  L  +L+R  +   +++P DVV + S V    + 
Sbjct: 14  FIGATDYRLLSRLAYQALSRDFDIAAELIEKLERPCVLPDDQVPPDVVKIGSIVTCE-VE 72

Query: 67  DGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
           DG  R  +LVYP  +     ++SV+ PVG ALLGLR G ++ W    G   HL V+ +E 
Sbjct: 73  DGPCRTFSLVYPDDVDAEKGRISVLTPVGVALLGLRPGQAVEWFSRDGQRNHLIVVRVED 132

Query: 127 Q 127
            
Sbjct: 133 D 133


>UniRef50_B1ZU20 GreA/GreB family elongation factor n=1 Tax=Opitutus terrae PB90-1
           RepID=B1ZU20_OPITP
          Length = 143

 Score =  111 bits (278), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 35/131 (26%), Positives = 59/131 (45%), Gaps = 3/131 (2%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           M+   +  +  D  ++ +L    +  G P    L +EL R  +     +P   + + S V
Sbjct: 1   MNTSPLYFSIEDYTKLSLLATATSRPGTPS--QLRSELSRGVVVDATALPPTAIRLGSTV 58

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
           +  +L  GE+   TLV P +      +LSV+AP+G A++G   G  + W  PGG    L 
Sbjct: 59  EIEDLESGEIETYTLVLPEQANVDARKLSVLAPIGTAVIGCLQGAEVAWSTPGGT-RRLR 117

Query: 121 VLELEYQPEAA 131
           +  +    E A
Sbjct: 118 IGRVSPPAEPA 128


>UniRef50_Q0BZP7 Regulatory protein n=1 Tax=Hyphomonas neptunium ATCC 15444
           RepID=Q0BZP7_HYPNA
          Length = 128

 Score =  111 bits (277), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 45/126 (35%), Positives = 69/126 (54%), Gaps = 2/126 (1%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           ++RP I + D + ER+  L         P AD L  EL RA++ + E++P DVV M+ RV
Sbjct: 4   ITRPPIYVTDAELERLSDLA-HAVQGREPAADMLIEELSRARVTAVEDVPVDVVRMHDRV 62

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
            F           TLVYP +   ++ ++S++  VGA L+GL+VGD++ W    G    +E
Sbjct: 63  NFV-YDGARYEDFTLVYPYEANIADKRISILTQVGAMLIGLQVGDAMQWAGRDGRGHSME 121

Query: 121 VLELEY 126
           VLE+  
Sbjct: 122 VLEVSR 127


>UniRef50_Q8ZJH2 Transcription elongation factor greB n=165 Tax=Proteobacteria
           RepID=GREB_YERPE
          Length = 171

 Score =  110 bits (275), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 32/135 (23%), Positives = 56/135 (41%), Gaps = 10/135 (7%)

Query: 2   SRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMPHDV 53
            RP +     +A  +    E   Y                L   L+  ++  P+      
Sbjct: 26  ERPVVTQAVSEAAAMGDRSENAEYIYGKKRLREIDRRVRFLAKRLEVLKIVDPDPRQEGK 85

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           V   + V+  N  + E R+  LV P +   +   +S+ +PV  AL+G +V D +  + P 
Sbjct: 86  VFFGAWVRVENEQE-EQRIFRLVGPDEFDPAKKWISIDSPVARALIGKQVDDEVTVQTPN 144

Query: 114 GVATHLEVLELEYQP 128
           G AT+  +LE+ Y+P
Sbjct: 145 GEATYW-ILEIRYRP 158


>UniRef50_D0J9T5 Transcription elongation factor n=55 Tax=Bacteria
           RepID=D0J9T5_BLASP
          Length = 162

 Score =  110 bits (275), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 33/134 (24%), Positives = 61/134 (45%), Gaps = 8/134 (5%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADA--------LNAELDRAQMCSPEEMPHD 52
           + RP I +   +A     L E   Y  +  A          L  +L  A++    ++   
Sbjct: 27  IERPKISMQIAEARDKGDLSENAEYDAIKEAQEFLEMNIAKLKKKLSNARIIDGSQINRT 86

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V++ S V+ +NL+ G  ++ TLV   +    + ++S+  P+   LLG +VG   H +LP
Sbjct: 87  RVSILSTVRVKNLTYGGEQIYTLVPEGEADLKSGKISINTPISTGLLGKQVGQIAHIKLP 146

Query: 113 GGVATHLEVLELEY 126
             +    E+LE+ +
Sbjct: 147 NKMILDYEILEIAF 160


>UniRef50_B4UCU9 Transcription elongation factor greA n=588 Tax=Bacteria
           RepID=GREA_ANASK
          Length = 166

 Score =  109 bits (274), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 48/134 (35%), Gaps = 9/134 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHD 52
           + RP I+    +A     L E   Y                +   +  A++    +   D
Sbjct: 24  VERPKIVKEIAEARAHGDLSENAEYHAAKEKQSHIEGRIAQVEHWIASAEVIDVTKHAGD 83

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V   + V   +   G+     +V   +      ++SV +P+  AL+G   GD++    P
Sbjct: 84  RVVFGATVSLEDAESGDQVTYRIVGELEADLKQGKISVTSPIARALIGRSEGDTVVVRSP 143

Query: 113 GGVATHLEVLELEY 126
           GG     E+  + +
Sbjct: 144 GGE-KEYEIQSVAF 156


>UniRef50_Q97EB6 Transcription elongation factor greA n=6 Tax=Clostridiales
           RepID=GREA_CLOAB
          Length = 158

 Score =  109 bits (273), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 26/108 (24%), Positives = 50/108 (46%), Gaps = 1/108 (0%)

Query: 18  ILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVY 77
              +            +   L  A +    E+ +DVV++ S+V  ++    E    ++V 
Sbjct: 52  DEAKNDQAFVEGRIAQIENMLKNANVIDESELKNDVVSVGSKVMVKDYQFDEEIEFSIVG 111

Query: 78  PAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
            A+      ++S  +PVG+AL+G +VGD I   +P GV    ++L ++
Sbjct: 112 SAEADPIENKISNESPVGSALIGKKVGDEIEVNVPDGVD-KYKILAIK 158


>UniRef50_Q15Z69 GreA/GreB family elongation factor n=1 Tax=Pseudoalteromonas
           atlantica T6c RepID=Q15Z69_PSEA6
          Length = 128

 Score =  109 bits (273), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 38/124 (30%), Positives = 65/124 (52%), Gaps = 2/124 (1%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
            +P III+  D   ++  LE+          A+  ELDRA + + +++P +VV + S+V 
Sbjct: 3   KQPDIIISTADLAELEYQLERSKLPDDA-IRAIENELDRATIVACKDLPENVVAIGSQVT 61

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           F+ L   +V  + L  P         +SV AP+G+AL+GL  G  I W+   G    +E+
Sbjct: 62  FKILDSQKVFTKALCLPHDSVKFEDSISVFAPIGSALIGLSTGQCIKWQTQRG-QQSVEI 120

Query: 122 LELE 125
           +++E
Sbjct: 121 IKVE 124


>UniRef50_A5V3E1 Transcription elongation factor greA n=13 Tax=Proteobacteria
           RepID=GREA_SPHWW
          Length = 158

 Score =  109 bits (273), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 30/133 (22%), Positives = 52/133 (39%), Gaps = 10/133 (7%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHDV 53
            RP II    +A     L E   Y                +   L RAQ+  P  +  D 
Sbjct: 27  ERPLIIDAIEEARAHGDLSENAEYHAAKERQGQIEASIADIEDRLSRAQVIDPSMLSGDK 86

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           +   + V   +  D +     +V   +      ++S  +P+G AL+G +V D +   +P 
Sbjct: 87  IVFGATVTLLD-DDEKPVRYQIVGQTEADAKTGKISYNSPLGRALIGKKVDDEVEVTVPS 145

Query: 114 GVATHLEVLELEY 126
           G   +L V ++E+
Sbjct: 146 GDRFYL-VSKIEF 157


>UniRef50_A4CMB9 Nucleoside diphosphate kinase regulator n=1 Tax=Robiginitalea
           biformata HTCC2501 RepID=A4CMB9_9FLAO
          Length = 139

 Score =  109 bits (272), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 6/132 (4%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPI----ADALNAELDRAQMCSPEEMPHDVVTM 56
           M    ++I   +   +   +   A+            L  ELD A++    EM +DVV  
Sbjct: 1   MKYKQLLIEKKEYVLLKRYVNLSAHYHDATLWQSIQKLLTELDSAKIVDEAEMQNDVVRF 60

Query: 57  NSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVA 116
           +S +   +  +G  R   LV P +   S  ++S++ P+G AL G   GD++ WE P G  
Sbjct: 61  HSIITVTS-ENGWSRRVQLVLPPERDVSKDKISILTPMGIALFGYAEGDTVSWEFPSG-P 118

Query: 117 THLEVLELEYQP 128
             L + ++E +P
Sbjct: 119 KRLRIEKVEQEP 130


>UniRef50_D0LKY5 Transcription elongation factor n=1 Tax=Haliangium ochraceum DSM
           14365 RepID=D0LKY5_HALO1
          Length = 169

 Score =  108 bits (271), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 52/120 (43%), Gaps = 7/120 (5%)

Query: 9   NDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDG 68
            D DA + +                  A+L  +++  P ++  + V   + V   ++  G
Sbjct: 47  ADYDAAKEEQ------GMIEARIREYEAKLALSEVIDPTKLSGERVKFGATVTVEDIDTG 100

Query: 69  EVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQP 128
           +    T+V   +    N ++SV APV  AL+G  +GD    + P G     E++++++ P
Sbjct: 101 DEATYTIVGEHEADIKNKRISVTAPVARALIGKAIGDETQVQTPKGT-RAFEIVDVKWLP 159


>UniRef50_UPI00016C498C transcription elongation factor greA n=1 Tax=Gemmata obscuriglobus
           UQM 2246 RepID=UPI00016C498C
          Length = 161

 Score =  108 bits (270), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 29/121 (23%), Positives = 51/121 (42%), Gaps = 9/121 (7%)

Query: 13  AERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRN 64
           A  +  L E   Y              DAL+  L RA +     +P D V   S+V+  +
Sbjct: 38  ARDLGDLSENAEYHAAREDQGILQARIDALSDRLSRAVIVDTSNLPKDTVAFGSKVRVLD 97

Query: 65  LSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
           +   E     LV P +      ++   +P+G  L+G + GD++  ++P G     ++LE+
Sbjct: 98  VDVDEEETFELVSPGQENPDKGRILTGSPIGQGLIGRKKGDTVEIQVPSGTI-KFKILEI 156

Query: 125 E 125
            
Sbjct: 157 S 157


>UniRef50_C9RKD0 Transcription elongation factor n=1 Tax=Fibrobacter succinogenes
           subsp. succinogenes S85 RepID=C9RKD0_FIBSS
          Length = 151

 Score =  108 bits (270), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 32/132 (24%), Positives = 55/132 (41%), Gaps = 11/132 (8%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIA---------DALNAELDRAQMCSPEEMPH 51
           + RP ++   +DA     L E   Y                 L  +L RAQ+    +   
Sbjct: 20  VERPRVLQELVDARAQGDLSENAEYHAAKERLASIDNIEMPKLQDQLARAQVI-AFDANS 78

Query: 52  DVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWEL 111
           D +   + +  +NL      V  LV P +    N ++S  +P+GAAL+G + GD++    
Sbjct: 79  DTIKFGATITAKNLKTKREIVYQLVSPEEADALNGKISFKSPIGAALMGKKRGDTVEVVT 138

Query: 112 PGGVATHLEVLE 123
           P G     E+++
Sbjct: 139 PKGKNQ-FEIID 149


>UniRef50_Q2GD99 Transcription elongation factor greA n=2 Tax=Neorickettsia
           RepID=GREA_NEOSM
          Length = 159

 Score =  108 bits (270), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 52/132 (39%), Gaps = 9/132 (6%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHDVV 54
           +P+++     A  +  L E   Y                L   L  A++    +   + V
Sbjct: 26  KPSVVAAVAQARELGDLSENAEYHEARKEQSFVEGKIRELQLCLSEAEVIDVSQFTGERV 85

Query: 55  TMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGG 114
              + V   N+    V +  +V   +      ++SV +P+G A++   VG+ +  +LP G
Sbjct: 86  KFGASVTLENMESKSVLIYQIVGNLESDIKEGKISVSSPIGKAVMNKEVGEIVEIDLPSG 145

Query: 115 VATHLEVLELEY 126
                ++L +E+
Sbjct: 146 -KKTYKILGVEF 156


>UniRef50_Q9HZY5 Transcription elongation factor greB n=13 Tax=Gammaproteobacteria
           RepID=GREB_PSEAE
          Length = 168

 Score =  107 bits (269), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 49/136 (36%), Gaps = 10/136 (7%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMPHD 52
           + RP +     +A  +    E   Y                L   L+  ++        +
Sbjct: 33  VRRPQVTQAVSEAAALGDRSENAEYIYGKKMLREIDSRVRFLRKRLENLKVVGERPADPN 92

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V   + V   +   GE     +V P ++   N Q+S+ +P+  AL+G  +   +    P
Sbjct: 93  RVYFGAWVTLEDED-GEQARYRIVGPDELDLRNNQISIDSPLARALVGKELDAEVLVRTP 151

Query: 113 GGVATHLEVLELEYQP 128
            G      V+E+EY P
Sbjct: 152 AGEKLWF-VVEIEYPP 166


>UniRef50_A6EIL5 Nucleoside diphosphate kinase regulator protein, putative n=1
           Tax=Pedobacter sp. BAL39 RepID=A6EIL5_9SPHI
          Length = 129

 Score =  107 bits (269), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 35/121 (28%), Positives = 63/121 (52%), Gaps = 3/121 (2%)

Query: 5   TIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRN 64
            ++I   D + +     +       +  +L+AEL RA + S EE P D + +NS V+ ++
Sbjct: 8   QVVITADDYQLLKPYFTKTNPHAGEM--SLSAELSRAVILSNEEFPSDAIRLNSTVRIQD 65

Query: 65  LSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
            S GE+    +V P        ++SV+ P+ AAL+G R GD++ W++P G   +  + E+
Sbjct: 66  ESTGEIMELIIVLPQHANIKEKKISVLTPIAAALIGFRQGDAVQWKVPAG-LKNFRITEV 124

Query: 125 E 125
            
Sbjct: 125 A 125


>UniRef50_C4XLU8 Transcription elongation factor greA n=11 Tax=Desulfovibrionales
           RepID=GREA_DESMR
          Length = 164

 Score =  107 bits (268), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 34/139 (24%), Positives = 62/139 (44%), Gaps = 10/139 (7%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHDVVT 55
           P +I+   +A     L E   Y              + + + + R  +     +  + V 
Sbjct: 26  PGVILAIKEAREEGDLRENAGYEAARERQGMLEARINYIESRMSRFNVIDLATLGGEQVI 85

Query: 56  MNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGV 115
             + V+  ++  G+V+  TL+ P +   S   +S+++PVG ALLG  VGD I  + P G 
Sbjct: 86  FGATVEIEDVDTGDVKKYTLLGPDEAEPSKGSISLLSPVGLALLGKFVGDEIVVDAPRGK 145

Query: 116 ATHLEVLELEYQ-PEAAGD 133
             + E++ + +  P AA D
Sbjct: 146 I-NYEIVSIAFHGPIAAAD 163


>UniRef50_A9WK05 Transcription elongation factor greA n=6 Tax=Chloroflexi (class)
           RepID=GREA_CHLAA
          Length = 157

 Score =  107 bits (268), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 31/133 (23%), Positives = 52/133 (39%), Gaps = 9/133 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHD 52
           + R  I      A+ +  + E   Y                L   L RA++   ++  + 
Sbjct: 26  VERKQIAERIAAAKELGDISESGEYEDAKKAQALLEGRIRELKHLLSRAEVIDEDQASNG 85

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V + S V  R   DG     T+V  A+      ++S  +P+GAALLG R  + +    P
Sbjct: 86  EVRVGSSVTVRFEDDGTEETWTIVGSAEANPRQGRISNESPLGAALLGKRARNKVTVHTP 145

Query: 113 GGVATHLEVLELE 125
            G    L +L++ 
Sbjct: 146 SG-VMKLTILKVR 157


>UniRef50_D1B0C0 Transcription elongation factor n=4 Tax=Campylobacteraceae
           RepID=D1B0C0_SULD5
          Length = 167

 Score =  107 bits (267), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 48/134 (35%), Gaps = 10/134 (7%)

Query: 2   SRPTIIINDLDAERI-DILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHD 52
            +    + +LD  R    L E   Y                L+  + R+Q+  P    HD
Sbjct: 25  RQRPETVIELDIARSHGDLKENAEYHAAKEKLAFIDSRIAELSDLVSRSQVIDPSTYEHD 84

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V   S +   NL   E    ++V   +       +S  +P+   L+G  V + +  +LP
Sbjct: 85  KVRFGSTITLENLETNEEVTYSIVGSTESNPDLGLISYHSPLSKQLMGRCVDEEVMIKLP 144

Query: 113 GGVATHLEVLELEY 126
            G      +L + Y
Sbjct: 145 VGT-QEYAILNITY 157


>UniRef50_Q5QX12 Transcription elongation factor family protein n=1 Tax=Idiomarina
           loihiensis RepID=Q5QX12_IDILO
          Length = 129

 Score =  107 bits (267), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 44/124 (35%), Positives = 69/124 (55%), Gaps = 2/124 (1%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
           +RP I+I+ +D   I+  L++         D L  EL RA++  P  MP +V  +N +V 
Sbjct: 7   TRPNIVISCVDMAVIEHHLDETRLPRE-FLDELEVELARAKIVEPNVMPANVACLNRQVT 65

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           F+ L  G+V  +TL  P ++   +  LSV AP+GAAL+GL VG SI W+   G    +E+
Sbjct: 66  FKVLETGKVFTKTLTAPDQVDKYDDSLSVFAPLGAALIGLSVGQSIQWKTNRG-LQSVEI 124

Query: 122 LELE 125
           + + 
Sbjct: 125 VHVA 128


>UniRef50_A5FRA2 Transcription elongation factor n=3 Tax=Dehalococcoides
           RepID=A5FRA2_DEHSB
          Length = 266

 Score =  107 bits (267), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 28/119 (23%), Positives = 52/119 (43%), Gaps = 9/119 (7%)

Query: 17  DILLEQPAYAGLPIAD--------ALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDG 68
             + E   Y                +  EL  A++    +     V M + VK R+L +G
Sbjct: 149 KDMRENAPYHAAKEQRGQIEGRIKEIEHELKHAEVSEYTDNNTSKVNMGNTVKLRDLKNG 208

Query: 69  EVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQ 127
           E  + TLV P ++     ++S  +P+G AL     GD+I  E+P G   ++ + ++ ++
Sbjct: 209 EQCIYTLVSPKEIEPLKGRISASSPIGKALFNRSKGDNIEIEVPSGTLQYV-IEDISFK 266


>UniRef50_Q88DU7 Transcription elongation factor greA n=83 Tax=Proteobacteria
           RepID=GREA_PSEPK
          Length = 160

 Score =  106 bits (266), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 47/134 (35%), Gaps = 10/134 (7%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMP-HD 52
            RP +     +A  +  L E   Y                +   L  + +     +P   
Sbjct: 27  ERPRLSQAIGEARELGDLKENAEYHAAREEQGMVEARIRDIEGRLQNSVVIDVTTIPHTG 86

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V   + V   N    E     +V   +      +LS  AP+  A++G   GD++  + P
Sbjct: 87  KVIFGTTVVLANTETDEEVTYQIVGEDEADVKQGKLSSGAPIARAIIGKEEGDTVVVKTP 146

Query: 113 GGVATHLEVLELEY 126
            G     E++E+++
Sbjct: 147 SGT-VEYEIVEVKH 159


>UniRef50_B1MX52 Transcription elongation factor greA n=11 Tax=Firmicutes
           RepID=GREA_LEUCK
          Length = 160

 Score =  106 bits (266), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 33/131 (25%), Positives = 53/131 (40%), Gaps = 8/131 (6%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLPIADA--------LNAELDRAQMCSPEEMPHDVV 54
           RP I      A     L E   Y       A        L   ++ A++  P     DVV
Sbjct: 29  RPEITNRIQIARSYGDLSENSEYQSAKDEQAFVEGRILTLKKMIENAEIIDPNATAADVV 88

Query: 55  TMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGG 114
           ++   V F+ L D E     +V   +      ++S  + +  ALL  +VGD +   LP G
Sbjct: 89  SLGKTVTFKELPDEEPETYAIVGSTESDPLAGKISNESAMAVALLDKKVGDKVSVPLPSG 148

Query: 115 VATHLEVLELE 125
            +  +E+L++E
Sbjct: 149 ESIDVEILKVE 159


>UniRef50_Q1H0G6 GreA/GreB family elongation factor n=3 Tax=Proteobacteria
           RepID=Q1H0G6_METFK
          Length = 165

 Score =  106 bits (266), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 44/112 (39%), Gaps = 2/112 (1%)

Query: 22  QPAYAGLPIADALNAELDRAQMCSPEEMPH-DVVTMNSRVKFRNLSDGEVRVRTLVYPAK 80
           +           L   +D A +  P +    + +   + V+  ++         +V   +
Sbjct: 55  KRLRQIDSRLRFLMKRMDIAVVVDPAQQQDLEKIYFGAWVELYSIDKDSEHHYRIVGQDE 114

Query: 81  MTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQPEAAG 132
           +      +S ++P+  ALLG + GD I  E P G     E++++ Y P   G
Sbjct: 115 LDPGKGYISWISPLARALLGKQPGDVIRVETPAGEER-FEIVDVSYHPPGQG 165


>UniRef50_D1B632 Transcription elongation factor n=4 Tax=Synergistaceae
           RepID=D1B632_THEAS
          Length = 164

 Score =  106 bits (266), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 25/122 (20%), Positives = 48/122 (39%), Gaps = 9/122 (7%)

Query: 12  DAERIDILLEQPAYAGLPIADA--------LNAELDRAQMCSPEEMPHDVVTMNSRVKFR 63
           +A     L E   Y                L  +L +A++    ++    V++ + V+ R
Sbjct: 42  EARAFGDLSENAEYHAAKEEQEKLESRIMWLEYQLSKAKVVESSDIDTSTVSLGATVQLR 101

Query: 64  NLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLE 123
           +L  G      LV   +      ++S  +PVG A++G   G+ +   +P G   HL +  
Sbjct: 102 DLDTGNTYTYVLVGSEEADPKANRISAQSPVGKAIIGRAEGEEVIVRVPKGT-RHLRIER 160

Query: 124 LE 125
           + 
Sbjct: 161 IS 162


>UniRef50_UPI0001C3129D transcription elongation factor GreA n=1 Tax=Conexibacter woesei
           DSM 14684 RepID=UPI0001C3129D
          Length = 161

 Score =  106 bits (265), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 51/131 (38%), Gaps = 8/131 (6%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHDV 53
            R  +     +A     + E   Y                L  +L  A +     +  DV
Sbjct: 26  KRREVAARIKEAREFGDISENAEYDDAKNEQAMLESKIAQLEEKLRAATVIDSRSVGTDV 85

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           V + S V+  +   G+     +V  A+   +  +LS  +PVG AL+G + G++   +LP 
Sbjct: 86  VGIGSSVQVADSQSGKSDTYVIVGSAEANPAERKLSNESPVGKALIGRKAGETATVQLPN 145

Query: 114 GVATHLEVLEL 124
           G    L + ++
Sbjct: 146 GKQRELRITKI 156


>UniRef50_Q2LR03 Transcription elongation factor greA n=1 Tax=Syntrophus
           aciditrophicus SB RepID=GREA_SYNAS
          Length = 161

 Score =  106 bits (265), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 31/130 (23%), Positives = 52/130 (40%), Gaps = 10/130 (7%)

Query: 8   INDLDAERI-DILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHDVVTMNS 58
           I D++  R    L E   Y                L   L  + +   + +  D +   +
Sbjct: 30  IKDIEIARAHGDLSENAEYTAAKEKQSFLHGKLQELENNLALSNVIDLKMLSDDRIVFGA 89

Query: 59  RVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATH 118
            V     S G+     LV P +   S  ++SV +P+G AL+G  +GD +    PGG   +
Sbjct: 90  TVIIEEASTGKQTNYQLVGPFESNISENKISVTSPIGKALIGKSIGDEVKVHTPGG-IRN 148

Query: 119 LEVLELEYQP 128
            EV+++   P
Sbjct: 149 FEVVDIYINP 158


>UniRef50_A7HDS3 Transcription elongation factor GreB n=3 Tax=Myxococcales
           RepID=A7HDS3_ANADF
          Length = 169

 Score =  106 bits (265), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 34/136 (25%), Positives = 55/136 (40%), Gaps = 10/136 (7%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMPHD 52
           + RP I+     A  +    E   Y                L+  +D   +  P   PH 
Sbjct: 32  VDRPKIVAEVEAAAALGDRSENAEYVYGKKKLRELDRRLRFLSERMDALTVVDPRPHPHG 91

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
                + V   +  +GE R   LV P +   +   +SV AP+G ALLG + GD++ +  P
Sbjct: 92  RAFFGAWVTIED-DEGEARTFRLVGPDEFDVAAGLISVEAPLGRALLGKQEGDTVLFLRP 150

Query: 113 GGVATHLEVLELEYQP 128
            G A  L ++ + + P
Sbjct: 151 AGEA-ELTIMAVRWSP 165


>UniRef50_A0AIU5 Transcription elongation factor greA n=99 Tax=Bacteria
           RepID=GREA_LISW6
          Length = 160

 Score =  106 bits (265), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 54/132 (40%), Gaps = 9/132 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADA--------LNAELDRAQMCSPEEMPHD 52
           + R  ++     A     L E   Y       A        +   +  AQ+    E  + 
Sbjct: 27  VKRKEVVERIKIARSFGDLSENSEYDSAKDEQAFVEGRITTIENMIRNAQIIDAAEAHNG 86

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
           +VT+ + V F  L DGE    T+V  A+      ++S  +P+   LLG + G+ +  + P
Sbjct: 87  LVTLGNTVTFIELPDGEEETYTIVGSAEADPFEGKISNDSPIAKGLLGHKEGEEVTIQTP 146

Query: 113 GGVATHLEVLEL 124
            G   ++++ ++
Sbjct: 147 AG-DMNVKIEKI 157


>UniRef50_A0LZA7 Transcription elongation factor n=1 Tax=Gramella forsetii KT0803
           RepID=A0LZA7_GRAFK
          Length = 146

 Score =  105 bits (263), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 36/129 (27%), Positives = 60/129 (46%), Gaps = 6/129 (4%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGL----PIADALNAELDRAQMCSPEEMPHDVVTM 56
           M    +II   + + +  ++    Y            LN EL  A++ +  EMP DV+ +
Sbjct: 1   MRYGELIIEKKEYDFLKQIMSLAKYHKDTSYKASIYKLNEELKDARILTNSEMPLDVIRL 60

Query: 57  NSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVA 116
           NS V          R   +V P K      ++SV+AP+G AL G   GD+I W  P G +
Sbjct: 61  NSLVTIE-TPYAVERTYQIVTPEKGDIRKNKISVLAPMGLALFGYAQGDNITWTFPLGES 119

Query: 117 THLEVLELE 125
            ++++ E++
Sbjct: 120 -YIKIKEVK 127


>UniRef50_C7GYY1 Transcription elongation factor n=1 Tax=Eubacterium saphenum ATCC
           49989 RepID=C7GYY1_9FIRM
          Length = 158

 Score =  105 bits (263), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 49/117 (41%), Gaps = 6/117 (5%)

Query: 9   NDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDG 68
           ++ DA + +                L   L+  ++        DVV +   V  +N++  
Sbjct: 47  SEYDAAKNEQ------AELEERISVLEDMLNNYEIIDSNAAKGDVVDLGLNVHLKNITKK 100

Query: 69  EVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
           +     +V  A+    N  +S  +P+G  LL  +VG+++  ++P G     ++L++ 
Sbjct: 101 KEETYRIVGSAEADPFNNLISNESPIGKGLLKHKVGETVSIDIPSGKTVKYKILKIS 157


>UniRef50_A5FHU8 GreA/GreB family elongation factor n=1 Tax=Flavobacterium
           johnsoniae UW101 RepID=A5FHU8_FLAJ1
          Length = 132

 Score =  105 bits (262), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 31/123 (25%), Positives = 61/123 (49%), Gaps = 2/123 (1%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
             PT   +D    R +++L+         A+ L+ ELDRA +    E+   V+ +NS V 
Sbjct: 3   PTPTFCKSDYQFLR-ELILKSKNSTNTKEANQLSQELDRAVISKESELDSSVIRINSLVT 61

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
             ++   +     +V P+      +++S++AP+  A++G +  D + WELP G    L++
Sbjct: 62  IEDVKANKQMKIQIVLPSYADVKQSKISILAPLSVAIIGFKENDEVDWELPAG-IKTLKI 120

Query: 122 LEL 124
           + +
Sbjct: 121 VAV 123


>UniRef50_C6WVB7 GreA/GreB family elongation factor n=2 Tax=Methylophilaceae
           RepID=C6WVB7_METML
          Length = 168

 Score =  104 bits (260), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 55/122 (45%), Gaps = 7/122 (5%)

Query: 11  LDAERIDILLEQPAYAG-----LPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNL 65
            +  R+ +  +                 + A LD A +  P +  H+ V   + ++  + 
Sbjct: 48  AELNRLKLTADDTFAKDKVAEIERDLRYVRARLDSAILVDPTKQSHETVLFGATIEVED- 106

Query: 66  SDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
             G      +V   +   S  ++S ++P+  +LLG +VGD++ W+ P G   +LE+L++ 
Sbjct: 107 GAGAQHTFHIVGEDEADASINKVSWVSPLAKSLLGQKVGDTVTWQRPAG-NINLEILDIH 165

Query: 126 YQ 127
           YQ
Sbjct: 166 YQ 167


>UniRef50_A0LK20 Transcription elongation factor greA n=1 Tax=Syntrophobacter
           fumaroxidans MPOB RepID=GREA_SYNFM
          Length = 156

 Score =  104 bits (259), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 31/132 (23%), Positives = 53/132 (40%), Gaps = 9/132 (6%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHDV 53
            RP +I    +A     + E   Y                L  ++   ++  P +  +  
Sbjct: 25  ERPMVIRAIEEARSHGDISENAEYEAAKEKQAMIEGRIQDLCQKMGECEIVEPSDNDNGR 84

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
               S V   +   GEV    LV P +    +  +SV++P+G AL+G   G+ I  + P 
Sbjct: 85  AIFGSTVVVEDTETGEVTSYRLVGPYEADVQSGTISVVSPLGKALIGKEEGEEIRVQTPK 144

Query: 114 GVATHLEVLELE 125
           G   ++EVLE+ 
Sbjct: 145 G-VRNIEVLEIR 155


>UniRef50_C9RNS9 GreA/GreB family elongation factor n=1 Tax=Fibrobacter succinogenes
           subsp. succinogenes S85 RepID=C9RNS9_FIBSS
          Length = 169

 Score =  103 bits (258), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 29/134 (21%), Positives = 53/134 (39%), Gaps = 9/134 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMPHD 52
           + RP +I     A       E  AY                L+  LD AQ+         
Sbjct: 37  VERPAMINQVQAAAAEGDRSENAAYTYGRMRVREIDRRLRELDRILDGAQIVENAATKDG 96

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            +   + VK  +      ++ ++V   ++     ++S+ +P+G AL G + GD++  + P
Sbjct: 97  SIRFGATVKMIDKKTKREKIYSIVGDKEIDPLQGRISMKSPIGEALQGKKAGDTVEVQAP 156

Query: 113 GGVATHLEVLELEY 126
            G     E+LE+ Y
Sbjct: 157 RGKIV-YEILEVNY 169


>UniRef50_A3PS97 GreA/GreB family elongation factor n=4 Tax=Rhodobacter sphaeroides
           RepID=A3PS97_RHOS1
          Length = 137

 Score =  103 bits (258), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 40/127 (31%), Positives = 61/127 (48%), Gaps = 2/127 (1%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
           SRP I +  ++  R+D L          +A  L  +L  A++ +P  +  DVVT+ S V 
Sbjct: 8   SRPAIDMTLIE--RLDTLAGAAIARLPDVAYPLITKLTSARLLAPARLSSDVVTIGSEVL 65

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           + +      R  TL +P     S   +S++ PVG ALLGL  GD   W+   G    L V
Sbjct: 66  YHDDQGARDRRVTLSWPEDADISRRSVSILTPVGVALLGLSAGDRFQWQTRAGERRSLTV 125

Query: 122 LELEYQP 128
           L++  +P
Sbjct: 126 LQVGSEP 132


>UniRef50_Q98F07 Nucleoside diphosphate kinase regulator; Rnk n=2 Tax=Mesorhizobium
           RepID=Q98F07_RHILO
          Length = 180

 Score =  103 bits (257), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 38/132 (28%), Positives = 60/132 (45%), Gaps = 1/132 (0%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           M      +   D   ++++LE+      PI   L  +L  A +   + +  D+VT+NSRV
Sbjct: 1   MKSTNCCLTTKDRAVLEVMLERRRAFADPIVHVLEHKLSSADVVPIDTVGPDIVTLNSRV 60

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
            F ++  G  + RTLV         + LSV    G  +LG+  G +   E   G    + 
Sbjct: 61  VF-SIDAGHAQTRTLVQNEVRGPVGSSLSVATRRGLCMLGMAQGQTASIEHADGRRESIL 119

Query: 121 VLELEYQPEAAG 132
           +  + YQPEAAG
Sbjct: 120 IKAVLYQPEAAG 131


>UniRef50_A7HXN2 GreA/GreB family elongation factor n=1 Tax=Parvibaculum
           lavamentivorans DS-1 RepID=A7HXN2_PARL1
          Length = 133

 Score =  103 bits (257), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 42/122 (34%), Positives = 66/122 (54%), Gaps = 1/122 (0%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFR 63
           P I++ +   + +  + E        +A  L+ EL+RA++     +P DVV +NS V+F 
Sbjct: 10  PQIVVAEEQFDALSDIAEGLTGVLPHVAGFLDRELNRARLLPLAHVPSDVVKVNSTVEFT 69

Query: 64  NLSDGE-VRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVL 122
             + GE V    L +PA+ T  +  +S+ +PVG ALLGLR G SI W    G    L+VL
Sbjct: 70  LDTRGERVERLKLAFPAESTAGDGYVSIASPVGVALLGLREGQSIEWTSRYGERRSLKVL 129

Query: 123 EL 124
           ++
Sbjct: 130 KV 131


>UniRef50_Q096W9 Transcription elongation factor GreB n=1 Tax=Stigmatella aurantiaca
           DW4/3-1 RepID=Q096W9_STIAU
          Length = 144

 Score =  102 bits (256), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 30/135 (22%), Positives = 47/135 (34%), Gaps = 11/135 (8%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEE-MPH 51
           + RP +      A       E   Y                L   LD A + +P E    
Sbjct: 11  VERPKVTAEVSAAAAQGDRSENAEYIYGKKRLREIDRRIRFLQKRLDTATIVTPAEQTDQ 70

Query: 52  DVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWEL 111
             V   + V   +   G      +V   ++     ++SV +P+G ALL   VGDS+    
Sbjct: 71  GRVYFGATVTLEDED-GVQTTYQIVGSDEIDTQGGRISVESPIGKALLRKAVGDSVEVMR 129

Query: 112 PGGVATHLEVLELEY 126
           P G    L ++ + Y
Sbjct: 130 PRGEI-ELTIVAIAY 143


>UniRef50_B4W8F1 Putative uncharacterized protein n=1 Tax=Brevundimonas sp. BAL3
           RepID=B4W8F1_9CAUL
          Length = 141

 Score =  102 bits (256), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 37/131 (28%), Positives = 62/131 (47%), Gaps = 3/131 (2%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
           SRP I ++  D + +  L+      G  +A  L  EL+RA +C P + P     ++  + 
Sbjct: 12  SRPDIFLSARDHQTLSRLVGDMPAEG--VAGLLQEELERAVICEPGDRPRGAAPLHRWLH 69

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           + +    + R   +V P +      ++SV++ VGA L+GL  G +I W  P G    L  
Sbjct: 70  YVDGRSPQPRRIQIVLPNEADIDAGKVSVLSYVGAGLIGLVEGHTIAWTDPSGADRRLTP 129

Query: 122 LELEYQPEAAG 132
           + +E  PE  G
Sbjct: 130 VMIE-DPETPG 139


>UniRef50_Q67JL1 Transcription elongation factor n=2 Tax=Clostridiales
           RepID=Q67JL1_SYMTH
          Length = 157

 Score =  102 bits (255), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 29/121 (23%), Positives = 51/121 (42%), Gaps = 9/121 (7%)

Query: 13  AERIDILLEQPAYAGLPIADA--------LNAELDRAQMCSPEEMPHDVVTMNSRVKFRN 64
           A     + E   Y       A        L   L  A++        +VV + S V  R+
Sbjct: 38  AREYGDISENSEYEDAKNEQAFIEGRILVLEKMLRNARVIDEPVGQQEVVVLGSTVVLRD 97

Query: 65  LSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
           L  G+    T+V   +   ++ ++S  +PVG A++G RVG  +  + P GV    E++ +
Sbjct: 98  LEYGDEHTYTIVGTTEADPAHNRISNESPVGRAIMGQRVGTVVAVDAPDGVF-KYEIVAI 156

Query: 125 E 125
           +
Sbjct: 157 K 157


>UniRef50_A8SDG2 Transcription elongation factor n=2 Tax=Clostridiales
           RepID=A8SDG2_9FIRM
          Length = 161

 Score =  102 bits (254), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 41/109 (37%)

Query: 18  ILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVY 77
              +            L   +  A +    E+  D V++ + V  R   + E     +V 
Sbjct: 50  DEAKNTQGLVENRITELEQTIKNAVIIDESELSVDNVSVGTHVTIRETGEDEAEEYDIVG 109

Query: 78  PAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
             +    N ++S  +PVG AL+G  VGD     LP G      VL + +
Sbjct: 110 RTEADAFNGKISDESPVGHALMGKAVGDKAEVLLPTGQTVVYTVLAITH 158


>UniRef50_C9KJ19 Transcription elongation factor n=1 Tax=Mitsuokella multacida DSM
           20544 RepID=C9KJ19_9FIRM
          Length = 156

 Score =  102 bits (254), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 47/118 (39%), Gaps = 11/118 (9%)

Query: 16  IDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSD 67
           +  L E   Y                L A++  + +        DVV M S+V  +++  
Sbjct: 41  LGDLSENSEYDDAKNEQAFLEGEIQDLTAKIRNSHIIKAGA--GDVVQMGSKVTVKDIEF 98

Query: 68  GEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
           G+     LV   +      ++S  +P+G ALLG + G  I    P G     E+L+++
Sbjct: 99  GDEETFMLVGSTEADPDEGKISNESPLGQALLGQKSGSVIDVHAPAG-IIKYEILDIK 155


>UniRef50_C7CFG6 Putative regulator n=1 Tax=Methylobacterium extorquens DM4
           RepID=C7CFG6_METED
          Length = 149

 Score =  101 bits (253), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 42/122 (34%), Positives = 62/122 (50%), Gaps = 1/122 (0%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFR 63
           P I +   D +R+          G   AD L  EL RA +C P  +P +VV++N RV +R
Sbjct: 8   PPITVTTRDFDRLVAFSLDAHLRGDSHADFLLWELKRATLCPPCALPSEVVSVNCRVLYR 67

Query: 64  NLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHW-ELPGGVATHLEVL 122
              +  VRV  L +P  + +    LSV +P+G ALLGLRVGD + + +   G    + V 
Sbjct: 68  LDDEPGVRVHLLAHPDDLINLADGLSVASPLGTALLGLRVGDRMPFCDNRLGTQHVVTVE 127

Query: 123 EL 124
            +
Sbjct: 128 GI 129


>UniRef50_C0QWD9 Transcription elongation factor n=2 Tax=Brachyspira
           RepID=C0QWD9_BRAHW
          Length = 154

 Score =  101 bits (252), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 32/130 (24%), Positives = 55/130 (42%), Gaps = 12/130 (9%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHDVVT 55
           P II    +A     L E   Y                L ++L   ++  P  +  D VT
Sbjct: 28  PAII---AEAREKGDLKENAEYHAAKEKQGLLNAQISKLESDLAGCEIIDPANLDKDTVT 84

Query: 56  MNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGV 115
              RVK ++ S   V    +V   +   S  +++++ P+   LLG ++GD +  ++P G 
Sbjct: 85  FGKRVKVKDKSRNAVFEYRIVGELEADMSKNEITIVTPIAKGLLGKKIGDVVTIKVPAG- 143

Query: 116 ATHLEVLELE 125
              LE+LE+ 
Sbjct: 144 DKVLEILEIS 153


>UniRef50_Q817Z6 Transcription elongation factor greA n=141 Tax=cellular organisms
           RepID=GREA_BACCR
          Length = 158

 Score =  101 bits (252), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 52/117 (44%), Gaps = 7/117 (5%)

Query: 9   NDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDG 68
           ++ DA + +    +           L   +  A +         VVT+   V F+ L +G
Sbjct: 49  SEYDAAKDEQAFVEGR------ITQLENMIRNAVIIKDTGEVSTVVTLGKTVTFKELPNG 102

Query: 69  EVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
           +    T+V  A+      ++S  +P+  +LLG ++G+ +  + PGG    +E++ ++
Sbjct: 103 DEEAYTIVGSAEADPFEGRISNDSPIAKSLLGKQIGEKVTIQTPGGE-MQVEIVSVK 158


>UniRef50_Q1QUF3 GreA/GreB family elongation factor n=1 Tax=Chromohalobacter
           salexigens DSM 3043 RepID=Q1QUF3_CHRSD
          Length = 178

 Score =  100 bits (251), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 30/138 (21%), Positives = 51/138 (36%), Gaps = 10/138 (7%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMPHD 52
           + RP +     +A  +    E   Y          +     L   LD  Q+         
Sbjct: 43  VKRPALSTKVGEAAALGDRSENADYTYNKKELNRVIARIRYLGKRLDELQVVDRLPADTS 102

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V   + V   +  DGE     +V   +       +SV AP+  A+LG  + + +    P
Sbjct: 103 RVYFGAYVTLED-DDGEEMTIRIVGHDETDTDKRWISVDAPLAQAMLGKGLDEDVTVNAP 161

Query: 113 GGVATHLEVLELEYQPEA 130
           GG  T++ + ++ Y PEA
Sbjct: 162 GGDTTYI-ITDIAYDPEA 178


>UniRef50_Q2Z001 Transcription elongation factor n=1 Tax=uncultured candidate
           division OP8 bacterium RepID=Q2Z001_9BACT
          Length = 156

 Score =  100 bits (251), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 27/134 (20%), Positives = 51/134 (38%), Gaps = 9/134 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHD 52
           + RP  +    +A     L E   +                L   +  A +  P ++  +
Sbjct: 24  VDRPANVKAIEEARGHGDLRENADFKCAKDEQAMIVGRIAYLQGRISHAAVIDPSKLSGN 83

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V   +RV  +NL  GE  V  LV   +       +S+ +P+   L+   VG+     +P
Sbjct: 84  RVVFGARVFLKNLDTGEPIVYRLVGEDEADIEQGSISITSPLARGLIRREVGEQAKIAVP 143

Query: 113 GGVATHLEVLELEY 126
            G     E++++E+
Sbjct: 144 SG-IKSFEIVKIEF 156


>UniRef50_B4RBL2 Transcription elongation factor n=1 Tax=Phenylobacterium zucineum
           HLK1 RepID=B4RBL2_PHEZH
          Length = 143

 Score =  100 bits (250), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 39/126 (30%), Positives = 56/126 (44%), Gaps = 2/126 (1%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
           S P + + D +   +  ++        P    L  EL RA +      P DVV + S V+
Sbjct: 9   SNPRVTVLDEEYAPLADIVCGSP-RATPGLALLWNELSRATLVQAGRAPADVVRLGSAVE 67

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           + +L+  E R   LV P +      +  V   +GAALLGLR GD  HW  P G    L+V
Sbjct: 68  YTDLTRRESRRIRLVLPREARPPALE-PVSGTIGAALLGLRPGDVFHWRAPSGELRSLQV 126

Query: 122 LELEYQ 127
             +E  
Sbjct: 127 DAVEPP 132


>UniRef50_A6EMP4 Transcription elongation factor n=4 Tax=Bacteroidetes
           RepID=A6EMP4_9BACT
          Length = 139

 Score =  100 bits (250), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 36/129 (27%), Positives = 59/129 (45%), Gaps = 6/129 (4%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIAD----ALNAELDRAQMCSPEEMPHDVVTM 56
           M   ++II   +   +  +L    YA           LN EL  A +   EEMP DV+  
Sbjct: 1   MKYGSVIIEKKEYVFLKRILNISGYAADFEIQKSFKRLNEELKTAIIVDEEEMPTDVIRF 60

Query: 57  NSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVA 116
           NS+V   +  +G  +   +V PA       ++S++  +GAAL G   GD++ WE P G  
Sbjct: 61  NSQV-LISTKNGWKKEFQIVSPALKDVKADKISILTVMGAALFGYAQGDTVEWEFPTGKN 119

Query: 117 THLEVLELE 125
             + + ++ 
Sbjct: 120 L-ITIEKVA 127


>UniRef50_B9XEY1 GreA/GreB family elongation factor n=1 Tax=bacterium Ellin514
           RepID=B9XEY1_9BACT
          Length = 170

 Score =  100 bits (249), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 22/95 (23%), Positives = 42/95 (44%), Gaps = 2/95 (2%)

Query: 33  ALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMA 92
            L   L  A++  P   P + V   + V  R+   G      +V   +       +S ++
Sbjct: 78  QLEQSLATAEIVPPPPQPWEQVRFGATVTVRD-ESGNETRYRIVGVDETDIDRDWVSWLS 136

Query: 93  PVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQ 127
           P+  AL+  R+G+ +H+  P G    LE++ + Y+
Sbjct: 137 PIARALINARIGERVHFRFPAGEKQ-LEIVSITYE 170


>UniRef50_A5CVW9 Transcription elongation factor greA n=4 Tax=Gammaproteobacteria
           RepID=GREA_VESOH
          Length = 159

 Score =  100 bits (249), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 51/135 (37%), Gaps = 10/135 (7%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHD 52
           +SRP II +   A     L E   Y                +  +L R Q+    ++  D
Sbjct: 24  VSRPRIIEDIRIARAHGDLKENAEYHAAKEEQSFVEGRIKEIELKLSRMQIIDVTKLSQD 83

Query: 53  -VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWEL 111
                 + +   N  D       +V   +   S  ++S  +P+ +AL+G   GD +  + 
Sbjct: 84  GRCVFGTTITLMNSVDNSEITYQIVGEDEADISLDKISCHSPIASALMGNEEGDKVIVKA 143

Query: 112 PGGVATHLEVLELEY 126
           P G     ++L +EY
Sbjct: 144 PKGDIV-YKILSVEY 157


>UniRef50_C1XQ58 Transcription elongation factor n=2 Tax=Meiothermus
           RepID=C1XQ58_9DEIN
          Length = 159

 Score =  100 bits (249), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 42/108 (38%), Gaps = 2/108 (1%)

Query: 20  LEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPA 79
             +  +        L + L RA +          V +   V+      G     T+V   
Sbjct: 54  ARRAQWDNDRRISELESILARAVVVEAGNGTPLEVGLGVSVELE-TDTGARMSLTIVGSH 112

Query: 80  KMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQ 127
           +    N ++S  +P+G  L+G +VGD + +  P G      ++EL Y+
Sbjct: 113 EADVFNGKISNESPMGQRLMGKKVGDRVEYPSPKG-VQSYTIVELSYK 159


>UniRef50_Q30T56 Transcription elongation factor n=3 Tax=Campylobacterales
           RepID=Q30T56_SULDN
          Length = 174

 Score =  100 bits (249), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 31/135 (22%), Positives = 54/135 (40%), Gaps = 9/135 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADA--------LNAELDRAQMCSPEEMPHD 52
           + +P      L A  +    E   Y                LNA + +A +  P  + H 
Sbjct: 23  VEKPKTAQEKLVAAALGDRSENADYQAAKEKLRHIDKRLFYLNAMIQKAHIIDPSTLLHT 82

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V+  S V+  +L   +  V T+    +    N  +S+ +P+   +LG RV D    +LP
Sbjct: 83  KVSFGSSVRILDLESDKEEVYTICGVLESEPENGLISIHSPLAQVMLGKRVSDEFKIQLP 142

Query: 113 GGVATHLEVLELEYQ 127
             +    E+LE+ Y+
Sbjct: 143 L-MKKEYEILEIYYK 156


>UniRef50_Q2Y7V5 GreA/GreB family elongation factor n=33 Tax=cellular organisms
           RepID=Q2Y7V5_NITMU
          Length = 213

 Score =  100 bits (249), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 32/136 (23%), Positives = 52/136 (38%), Gaps = 12/136 (8%)

Query: 2   SRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMPHDV 53
            RP +      A       E   Y                L   LD A++  P     D 
Sbjct: 53  ERPQVTATVSWAAANGDRSENADYIYGKKRLREIDRRIRFLTRRLDMAEIIDPSMPREDE 112

Query: 54  --VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWEL 111
             +   + V + N   GE ++ ++V   ++  +   +S ++P+   LL  R GD +    
Sbjct: 113 SRIFFGATVTYINEK-GEEKIVSIVGVNEIDTTRGYISWVSPLARTLLKAREGDVVTLHA 171

Query: 112 PGGVATHLEVLELEYQ 127
           PGG    LE+LE+ YQ
Sbjct: 172 PGGTE-ELEILEVRYQ 186


>UniRef50_Q0BR49 Transcription elongation factor greB n=4 Tax=cellular organisms
           RepID=Q0BR49_GRABC
          Length = 169

 Score =  100 bits (249), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 33/138 (23%), Positives = 55/138 (39%), Gaps = 11/138 (7%)

Query: 2   SRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMP-HD 52
            RP I+     A       E   Y                L   L+ A +  P   P  D
Sbjct: 34  ERPKIVEIVSWAAGNGDRSENGDYLYGKKRLREIDRRVRFLTKRLENAVVIDPATQPHKD 93

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            +   + V + N +D E    T+V   +   +  ++S+++PV  ALLG   GD +    P
Sbjct: 94  RIYFGATVTYINAAD-ETVQVTIVGADEADMALGRISLLSPVAKALLGASKGDEVTVITP 152

Query: 113 GGVATHLEVLELEYQPEA 130
                 L++L+++Y+P A
Sbjct: 153 V-KTEILDILDVDYRPLA 169


>UniRef50_A6W1U9 Transcription elongation factor GreB n=17 Tax=Gammaproteobacteria
           RepID=A6W1U9_MARMS
          Length = 196

 Score = 99.8 bits (248), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 49/133 (36%), Gaps = 10/133 (7%)

Query: 2   SRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMPHDV 53
            RP +     +A       E   Y                L   L+   +        + 
Sbjct: 61  KRPAVTETVREAAAQGDRSENAEYIYGKKQLREIDRRVRYLEKRLEVCTVVDRFPSDQER 120

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           V   + V   +   G ++   +V P ++   ++ +S+ +PV  ALL  + GD +   L G
Sbjct: 121 VFFGAWVTLED-EAGNLKEYRIVGPDELDHHSSYISIDSPVARALLKKQEGDEVVIRLAG 179

Query: 114 GVATHLEVLELEY 126
           G  T++ +  +EY
Sbjct: 180 GEKTYI-IDAVEY 191


>UniRef50_Q03RN4 Transcription elongation factor n=1 Tax=Lactobacillus brevis ATCC
           367 RepID=Q03RN4_LACBA
          Length = 132

 Score = 99.8 bits (248), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 31/132 (23%), Positives = 57/132 (43%), Gaps = 10/132 (7%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADA--------LNAELDRAQMCSPEEMPHD 52
           + RP +I     A     L E   Y       +        +   L  AQ+   ++   D
Sbjct: 2   VQRPKVIDRIKIARSYGDLSENSEYESAKDEQSMLETRISTVERMLQYAQIIDNDDTDKD 61

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            +T+  +V F+   D E    T+V  A+    + ++S  +P+   LLG RVG+++ +  P
Sbjct: 62  EITVGKKVTFQ-EDDDEPEEYTIVGAAEADPMSGKISNDSPIAKGLLGHRVGETVTFPTP 120

Query: 113 GGVATHLEVLEL 124
           GG    ++V+ +
Sbjct: 121 GG-DMTVKVIAV 131


>UniRef50_B8IHN9 GreA/GreB family elongation factor n=1 Tax=Methylobacterium
           nodulans ORS 2060 RepID=B8IHN9_METNO
          Length = 147

 Score = 99.8 bits (248), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 37/122 (30%), Positives = 63/122 (51%), Gaps = 1/122 (0%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFR 63
           P I I++ D +R+ +        G      L +EL+RA +C   E+P  VV+ N RV +R
Sbjct: 8   PPITISNYDFDRLVVYGLTAYMHGDRNVVFLFSELERATVCPAMELPDQVVSANCRVIYR 67

Query: 64  NLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHW-ELPGGVATHLEVL 122
              +  +R   LV+P  +   + ++S  +P+G ALLGL+VGD + + +   G    + V 
Sbjct: 68  IDDEPCLRAHMLVHPCDLISPDDEISAGSPLGIALLGLKVGDRMPFCDTQTGGRHVVAVE 127

Query: 123 EL 124
            +
Sbjct: 128 GV 129


>UniRef50_Q3Z8E7 Transcription elongation factor greA n=2 Tax=Dehalococcoides
           RepID=GREA_DEHE1
          Length = 156

 Score = 99.5 bits (247), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 47/118 (39%), Gaps = 9/118 (7%)

Query: 17  DILLEQPAYAGLPIAD--------ALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDG 68
             + E   Y                +  EL  A +    +     V M S VK R+  +G
Sbjct: 40  KDMRENAPYHAAKEQRGQIEGRIKEIEHELKYADVSEYTDTNTSKVNMGSTVKLRDPKNG 99

Query: 69  EVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
           E    TLV P ++     ++S  +P+G A+     G+ I  E+P G   ++ + ++ +
Sbjct: 100 ECCTYTLVSPKEIEPLKGKISASSPIGKAVFNRNKGEQIEIEVPSGTLQYI-IEDISF 156


>UniRef50_Q3ATA7 Transcription elongation factor greA n=13 Tax=Bacteria
           RepID=GREA_CHLCH
          Length = 160

 Score = 99.1 bits (246), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 36/136 (26%), Positives = 62/136 (45%), Gaps = 10/136 (7%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADA--------LNAELDRAQMCSPEEMPHDV 53
           +R  ++    +A     L E   Y       +        L ++L  A +  P+++  D 
Sbjct: 26  TRKEVLEKIAEARAHGDLSENAEYDAAREEQSQIEARIGDLESKLSAATILDPKQIKTDK 85

Query: 54  VTMNSRVKFRNLSD-GEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
           V + + VK RNL +  E+   TLV   +      ++SV +PVG +L+G  VG  +   +P
Sbjct: 86  VYILTSVKLRNLDNPDEIIEYTLVSSEEADTDAGKISVRSPVGRSLIGKTVGAKVTIVVP 145

Query: 113 GGVATHLEVLELEYQP 128
            G   H E+LE+  +P
Sbjct: 146 KGE-LHYEILEIFVKP 160


>UniRef50_C1F9R4 Transcription elongation factor GreA n=1 Tax=Acidobacterium
           capsulatum ATCC 51196 RepID=C1F9R4_ACIC5
          Length = 165

 Score = 99.1 bits (246), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 31/119 (26%), Positives = 46/119 (38%), Gaps = 9/119 (7%)

Query: 13  AERIDILLEQPAYAGLPIADA--------LNAELDRAQMCSPEEMPHDVVTMNSRVKFRN 64
           A  +  L E   Y                L   +    + +   +PHD V   S V+  +
Sbjct: 31  AAALGDLSENAEYHMAKQRQEFVNARLGQLKKRMAELSLVNLANIPHDRVAFGSTVEVFD 90

Query: 65  LSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLE 123
            S  E     LV   +   S   +S  +P+G AL+G +VGD+     P G    LEVL+
Sbjct: 91  TSKDEKIEYKLVTSEESDVSKGLISTTSPIGRALIGKQVGDTATVVTPSG-NRELEVLK 148


>UniRef50_C8S319 GreA/GreB family elongation factor n=1 Tax=Rhodobacter sp. SW2
           RepID=C8S319_9RHOB
          Length = 167

 Score = 99.1 bits (246), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 36/118 (30%), Positives = 52/118 (44%), Gaps = 6/118 (5%)

Query: 14  ERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVR 73
           ER+D L E            L A L  A    P   P   V   +RV+   L+DG  +V 
Sbjct: 55  ERLDKLPEAA---AERDIRYLEARLRSAIPVDPSSQPAGEVAFGARVEVA-LADGSRQVW 110

Query: 74  TLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEY-QPEA 130
            +    +   +  +++  +P+  ALLG  VGD + W  P G    LEVL + Y  P+A
Sbjct: 111 QITGEDEADATQNRIAPQSPLARALLGAEVGDLVIWRKPSG-PVELEVLAIAYADPQA 167


>UniRef50_A3HZU2 Transcription elongation factor GreB n=2 Tax=Bacteroidetes
           RepID=A3HZU2_9SPHI
          Length = 166

 Score = 98.7 bits (245), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 20/104 (19%), Positives = 43/104 (41%), Gaps = 1/104 (0%)

Query: 23  PAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMT 82
            +         L+  +  A++    E P + +   ++V  +     +     LV   +  
Sbjct: 64  ASNFISAKIKLLDERIATAKIVDLSEQPKNEIRFGAKVTLKIGKSPKAMTYQLVGVDEAD 123

Query: 83  DSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
            S  ++S ++P+   L+G +VG+     L  G     EV+E++Y
Sbjct: 124 ISKNKISFISPIAMILIGKKVGEKATLSLTKG-DRVFEVMEIKY 166


>UniRef50_C4Z9L9 Transcription elongation factor n=3 Tax=Firmicutes
           RepID=C4Z9L9_EUBR3
          Length = 185

 Score = 98.7 bits (245), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 29/137 (21%), Positives = 55/137 (40%), Gaps = 9/137 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAG--------LPIADALNAELDRAQMCSPEEMPHD 52
           + R  +     +A     L E   Y              + +   L  A++   EE+  D
Sbjct: 49  VKRKEVSQKIKEAREQGDLSENAEYDAAKDEQRDIEARIEEIEKILKNAEVVVEEEVDLD 108

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            +++  +++  +    E     +V   +      ++S  +PVG ALLG +VGD++  E  
Sbjct: 109 KISIGCKIRILDCEFDEELEYKIVGSTEANSLKGKISNESPVGKALLGKKVGDTVTVETQ 168

Query: 113 GGVATHLEVLELEYQPE 129
            G     +VLE++   E
Sbjct: 169 VGE-LTYKVLEIQRAEE 184


>UniRef50_Q98Q16 Transcription elongation factor greA n=3 Tax=Mycoplasma
           RepID=GREA_MYCPU
          Length = 157

 Score = 98.7 bits (245), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 48/132 (36%), Gaps = 12/132 (9%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHD 52
           + RP +I+   +A +   L E   Y                L   L  A          D
Sbjct: 27  VERPAVILEIKEARQQGDLSENAEYDAAREKQGQIEDRITELENILSNAISIQESH--SD 84

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            + + S V+  N S G+ R   +V       +  ++S  +P+  +++G   GD +  + P
Sbjct: 85  KIGLGSVVRILNQSTGKERTFKIVGSFDTDPTQNKISYESPLAKSIIGFSKGDVVEIDAP 144

Query: 113 GGVATHLEVLEL 124
                  ++L +
Sbjct: 145 D--KYTTKILSV 154


>UniRef50_C7PP41 Transcription elongation factor n=1 Tax=Chitinophaga pinensis DSM
           2588 RepID=C7PP41_CHIPD
          Length = 157

 Score = 98.3 bits (244), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 45/116 (38%), Gaps = 7/116 (6%)

Query: 9   NDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDG 68
            + DA +      +           L + +  A++   + +    V++  +V   N+++ 
Sbjct: 47  AEYDAAK------EAQGMHEAKVAILESAIATARIVEADSIDTSKVSILCKVTITNMANK 100

Query: 69  EVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
           +     LV   +      ++SV +P+G  LLG  VG+      P G     ++  +
Sbjct: 101 KTVTYQLVSEKEADLKLNKISVTSPIGKGLLGKAVGEIADVHAPNGS-LKFKIENI 155


>UniRef50_Q01RT9 GreA/GreB family elongation factor n=2 Tax=Acidobacteria
           RepID=Q01RT9_SOLUE
          Length = 164

 Score = 98.3 bits (244), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 47/119 (39%), Gaps = 10/119 (8%)

Query: 14  ERI-DILLEQPAYAGLPIAD--------ALNAELDRAQMCSPEEMPHDVVTMNSRVKFRN 64
            R+   L E   Y                L + L +  M    ++P D   + S V   +
Sbjct: 30  ARLHGDLKENAEYHAAKDRQGFVSARLGQLKSRLGQLAMIDFTKIPRDKAGLGSTVVVLD 89

Query: 65  LSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLE 123
           +   +     LV   +    N ++S  +P+G ALLG  VGD +    PGG    LE+L+
Sbjct: 90  VKSDQEITYHLVTSEEADAPNGKVSTTSPIGRALLGKTVGDEVKVMSPGG-VKELEILK 147


>UniRef50_Q1AU03 Transcription elongation factor n=1 Tax=Rubrobacter xylanophilus
           DSM 9941 RepID=Q1AU03_RUBXD
          Length = 154

 Score = 98.3 bits (244), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 27/107 (25%), Positives = 44/107 (41%), Gaps = 2/107 (1%)

Query: 20  LEQPAYAGLPIADALNAELDRAQMCSP-EEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYP 78
            +            L   L  A++  P        V + +RV  R + DG  R   +V  
Sbjct: 46  AKNEQGLLERRISELQRRLRNAKIVDPASSAEEGAVDLGTRVTLRVVGDGRERTFQIVGA 105

Query: 79  AKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
            +   ++ +LS  +PVG ALL  RVG+ +    P G     E++ +E
Sbjct: 106 NEADPASGKLSHASPVGKALLRRRVGEKVRVSTPRGAT-EYEIVSVE 151


>UniRef50_D0J5N8 Kelongation factor GreB n=4 Tax=Proteobacteria RepID=D0J5N8_COMTE
          Length = 231

 Score = 98.3 bits (244), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 34/135 (25%), Positives = 52/135 (38%), Gaps = 11/135 (8%)

Query: 2   SRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPE-EMPHD 52
            RP I+     A       E   Y                L   L+ A++  P      D
Sbjct: 93  ERPKIVEIVHWAASNGDRSENGDYLYGKKRLREIDRRIRFLTKRLEIAEVVDPAVHAGSD 152

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V   + V + +  +G  R  T++   +   +  Q+S +APV  ALL  RVGD +    P
Sbjct: 153 QVFFGATVSYVD-DEGVERTITIMGIDEADSAQNQVSWIAPVSRALLKARVGDEVALPTP 211

Query: 113 GGVATHLEVLELEYQ 127
            G    LE+L++ Y 
Sbjct: 212 AG-VRMLEILDVSYP 225


>UniRef50_Q1PYP5 Transcription elongation factor n=1 Tax=Candidatus Kuenenia
           stuttgartiensis RepID=Q1PYP5_9BACT
          Length = 741

 Score = 97.5 bits (242), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 50/120 (41%), Gaps = 3/120 (2%)

Query: 8   INDLDAERID--ILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNL 65
           I+  D           +     +  A+ L A+L +     P  +  ++V+  ++V  +N 
Sbjct: 620 ISRGDLRENAEYQAAREKQAQLIEKAERLKADLQKIVFIEPYTVKTNIVSPGTKVTIKNK 679

Query: 66  SDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
                   TL+ P         +S ++P+G  LL  + G+++  +LP       +++++E
Sbjct: 680 DKETTETYTLLGPWDADIDKNIISYLSPIGKGLLNKKTGETVTIQLPENEIVC-DIIKIE 738


>UniRef50_C0JZV3 Transcription elongation factor GreA n=1 Tax=uncultured bacterium
           URE4 RepID=C0JZV3_9BACT
          Length = 112

 Score = 97.5 bits (242), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 20/95 (21%), Positives = 43/95 (45%), Gaps = 1/95 (1%)

Query: 31  ADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSV 90
              L  ++  A++    ++  D V + S+V   N++        +V  ++   S   LS 
Sbjct: 18  IARLKEKVANARVIDESKLSADTVQLLSKVTVENMNAKMKMQFQIVGESEADFSKGLLSA 77

Query: 91  MAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
             P+G AL+G   G+ +  ++P G     ++L++ 
Sbjct: 78  STPIGKALMGHGKGEVVEAKVPSG-IMKFKILDIS 111


>UniRef50_D1PEW3 Transcription elongation factor n=1 Tax=Prevotella copri DSM 18205
           RepID=D1PEW3_9BACT
          Length = 154

 Score = 96.8 bits (240), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 55/133 (41%), Gaps = 9/133 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGL-PIADALNAE-------LDRAQMCSPEEMPHD 52
           +  P +     +A     L E   Y         L +        L+ A++     +  D
Sbjct: 22  VELPAVRDAIAEARDKGDLSENFEYHAAKREQGKLLSRISFKQKVLENARVIDKSRLKSD 81

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V + S++K  NL++      T+V P +    + ++S+ +P+  ALLG + G+ +  ++P
Sbjct: 82  TVGLLSKIKITNLANKCSMNYTIVNPHEADLHSGKISIKSPIAKALLGKKAGEEVMVKVP 141

Query: 113 GGVATHLEVLELE 125
            G      +  +E
Sbjct: 142 AG-LLKFRLDSVE 153


>UniRef50_UPI0001C37CEA transcription elongation factor GreA n=1 Tax=Ruminococcus
           flavefaciens FD-1 RepID=UPI0001C37CEA
          Length = 156

 Score = 96.8 bits (240), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 49/117 (41%), Gaps = 7/117 (5%)

Query: 9   NDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDG 68
            + D  + +  + +           L   +D A++     +  D + M+S++  + L  G
Sbjct: 46  AEYDEAKNEQAILEA------HIAELQYTIDNAEIVDDSNISVDEIGMSSKITIKRLDTG 99

Query: 69  EVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
           ++   T+V          ++S  +P+G A +  RVGD    + P G     EV+E+ 
Sbjct: 100 KIETFTIVSTNHANVREGKISDASPIGKAAMKKRVGDVFIVDAPAGE-LKFEVVEIS 155


>UniRef50_D2T9B8 Transcription elongation factor greB n=3 Tax=Erwinia
           RepID=D2T9B8_ERWPY
          Length = 187

 Score = 96.4 bits (239), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 48/133 (36%), Gaps = 10/133 (7%)

Query: 2   SRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMPHDV 53
            RP +      A  +    E   Y                L   L++ ++          
Sbjct: 53  ERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYLTKCLEQLRIVDYSPQQDGK 112

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           V   + V+  N  DG+++   +V   ++   N  +S+ +P+  ALL   VGD+     P 
Sbjct: 113 VFFGAWVEVEN-DDGDIKRFRIVGYDEIFGRNDYISIDSPMARALLKKEVGDAATVFTPA 171

Query: 114 GVATHLEVLELEY 126
           G A    + ++ Y
Sbjct: 172 GEALWY-INDISY 183


>UniRef50_Q04HS9 Transcription elongation factor greA n=90 Tax=Bacilli
           RepID=GREA_STRP2
          Length = 160

 Score = 96.0 bits (238), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 56/133 (42%), Gaps = 9/133 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADA--------LNAELDRAQMCSPEEMPHD 52
           + RP ++     A     L E   Y       A        L  ++  A++ + + +  D
Sbjct: 26  VRRPEVVERIKIARSYGDLSENSEYEAAKDEQAFVEGQISSLETKIRYAEIVNSDAVAQD 85

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V +   V  + + + E  V  +V  A       ++S  +P+G AL+G + GD+   E P
Sbjct: 86  EVAIGKTVTIQEIGEDEEEVYIIVGSAGADAFAGKVSNESPIGQALIGKKTGDTATIETP 145

Query: 113 GGVATHLEVLELE 125
            G    +++L++E
Sbjct: 146 VGS-YDVKILKVE 157


>UniRef50_C6X3W9 Transcription elongation factor GreB n=1 Tax=Flavobacteriaceae
           bacterium 3519-10 RepID=C6X3W9_FLAB3
          Length = 183

 Score = 96.0 bits (238), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 41/104 (39%), Gaps = 1/104 (0%)

Query: 23  PAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMT 82
                      LN  +  A++     +    V   + V F+NL++   +   LV   +  
Sbjct: 81  AFNHLNARLQLLNGRMASAKIIDTARLSQGEVHFGATVTFKNLNNNLRQTFQLVGVDEAN 140

Query: 83  DSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
            S  +L+   P+  AL+  +VG+ +  +L        E+L + Y
Sbjct: 141 ISKGKLAFTTPLAKALINSKVGEKVTLQLGDKTNI-FEILSIGY 183


>UniRef50_C1ZBG3 Transcription elongation factor n=1 Tax=Planctomyces limnophilus
           DSM 3776 RepID=C1ZBG3_PLALI
          Length = 160

 Score = 96.0 bits (238), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 28/119 (23%), Positives = 52/119 (43%), Gaps = 11/119 (9%)

Query: 17  DILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDG 68
             L E   Y G            ++L ++L    +     +P  VV   +RV  +N  DG
Sbjct: 40  GDLKENAEYHGQREEQGRLQARINSLKSKLASCYIVDKSTLPKGVVAFGTRVTVKNTDDG 99

Query: 69  EVRVRTLVYPAKMTDSNT--QLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
           ++     V P +    +   ++   +P+ +ALLG +V D +  ++P G   + E+ E+E
Sbjct: 100 DIEKYEFVGPGEEDYMSDVMKILTTSPLASALLGKKVNDKVSIQVPRGTI-NYEITEIE 157


>UniRef50_Q8P7P8 Transcription elongation factor greB n=53 Tax=Proteobacteria
           RepID=GREB_XANCP
          Length = 168

 Score = 95.6 bits (237), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 27/134 (20%), Positives = 48/134 (35%), Gaps = 9/134 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMPHD 52
           + RP ++     A       E   Y                L+  L+  ++         
Sbjct: 33  LRRPEVVRALAAAAAEGDRSENAEYTYRKKQLGEIDRRVRYLSKRLEALRVVDTAPTDPQ 92

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V   ++V+  +   GE+    +V P +       +S+ +P+  ALL  RV D    +LP
Sbjct: 93  AVFFGAQVELEDADSGELLRYRIVGPDETDAGRGWISIDSPLARALLKKRVDDEFEAQLP 152

Query: 113 GGVATHLEVLELEY 126
            G      V+ +EY
Sbjct: 153 SG-KHTFVVVVVEY 165


>UniRef50_Q88KH5 Transcription elongation factor greB n=84 Tax=Gammaproteobacteria
           RepID=GREB_PSEPK
          Length = 162

 Score = 95.6 bits (237), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 45/132 (34%), Gaps = 10/132 (7%)

Query: 3   RPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMPHDVV 54
           RP I      A  +    E   Y                L   L+  ++ +        V
Sbjct: 26  RPEITQKVAWAASLGDRSENADYQYNKKLLREIDRRVRYLRKRLEDVKVVAYSPEQEGKV 85

Query: 55  TMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGG 114
              + V+  N  +GE     +V   ++   N  +S+ +P+  ALL    GD +    P G
Sbjct: 86  FFGAWVEIEN-DEGETMKFRIVGYDEIYGRNDYISIDSPMARALLKKEEGDEVVVHTPTG 144

Query: 115 VATHLEVLELEY 126
            AT   V  + Y
Sbjct: 145 EATWY-VSSIRY 155


>UniRef50_B2KBD2 GreA/GreB family elongation factor n=1 Tax=Elusimicrobium minutum
           Pei191 RepID=B2KBD2_ELUMP
          Length = 156

 Score = 95.6 bits (237), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 51/131 (38%), Gaps = 9/131 (6%)

Query: 5   TIIINDLDAERIDILLEQPAYAGLPIADA--------LNAELDRAQMCSPEEMPHDVVTM 56
            + +   +A +   L E   YA               L  +L  AQ+    ++      +
Sbjct: 27  KLSLEIGEAAQQGDLRENAEYAAAKSRQEETLVKIQDLEQKLRNAQITDDIQVDKSEARI 86

Query: 57  NSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVA 116
            + V   ++S       TLV   +       LSV +P+  ++LG + G+     LP G  
Sbjct: 87  GATVTVHDISADIDFTYTLVGSMESNPEKGLLSVQSPLAVSILGKKEGEEFEAVLPKGKK 146

Query: 117 THLEVLELEYQ 127
              ++++LEY+
Sbjct: 147 M-YKLVKLEYK 156


>UniRef50_Q1J0L4 Transcription elongation factor n=3 Tax=Deinococcus
           RepID=Q1J0L4_DEIGD
          Length = 156

 Score = 95.2 bits (236), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 34/122 (27%), Positives = 51/122 (41%), Gaps = 6/122 (4%)

Query: 8   INDLDAERIDILLEQPAYAGLPIAD--ALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNL 65
           I D D        E         A    L  +L+RAQ+   +        + ++VK R+ 
Sbjct: 39  IADGDLRESAAYDEARMQQSENEARILELEDQLERAQIIEEDA--SGGAGLGAKVKVRDE 96

Query: 66  SDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
             G  R   LV   ++     ++S  +P+G AL G R G  +  +LP G A   EVLE+ 
Sbjct: 97  K-GNERQFELVGTYEVDVLKGKISDASPIGQALSGKRPGQIVTVQLPKGSA-KFEVLEVT 154

Query: 126 YQ 127
           Y 
Sbjct: 155 YD 156


>UniRef50_A5FHJ3 GreA/GreB family elongation factor n=3 Tax=Flavobacteriaceae
           RepID=A5FHJ3_FLAJ1
          Length = 143

 Score = 95.2 bits (236), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 35/125 (28%), Positives = 64/125 (51%), Gaps = 2/125 (1%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           MS+  II+     + I   + +         + L +EL  A     + +P DVV++N +V
Sbjct: 18  MSQNNIILTTGTYDLIKDHVRRKKVT-PQEEELLLSELKHATQVLRKNLPEDVVSVNRKV 76

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
            +++ +  + +   LV P K+  S  ++SV++  G A++G +VGD I W    G    LE
Sbjct: 77  TYKDHNTNQEKTILLVGPEKVKVSKNKISVLSDEGIAMVGYKVGDLIEWPAKKGH-LKLE 135

Query: 121 VLELE 125
           +L++E
Sbjct: 136 ILKVE 140


>UniRef50_Q11G80 GreA/GreB family elongation factor n=1 Tax=Chelativorans sp. BNC1
           RepID=Q11G80_MESSB
          Length = 176

 Score = 95.2 bits (236), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 35/129 (27%), Positives = 54/129 (41%), Gaps = 1/129 (0%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKF 62
           +    +   D E +  + E+       +   L  +L+ A++  PE  P DVVT+NSR+ F
Sbjct: 4   KRGCTLTTRDFETLQQMFEEHRDRNEAMTMLLRHKLETARVTRPEVTPDDVVTLNSRISF 63

Query: 63  RNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVL 122
           R + +G    R +            L +    G ALLGL  G          +   L+V 
Sbjct: 64  R-VGNGMPETRIICRDRSRGPLGYFLPITTIRGLALLGLTEGQMTPVSRGRSLVEILQVT 122

Query: 123 ELEYQPEAA 131
            + YQPE A
Sbjct: 123 AIHYQPERA 131


>UniRef50_A6H247 Transcription elongation factor greA n=33 Tax=Bacteroidetes
           RepID=GREA_FLAPJ
          Length = 158

 Score = 95.2 bits (236), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 32/135 (23%), Positives = 51/135 (37%), Gaps = 9/135 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADAL--------NAELDRAQMCSPEEMPHD 52
           + RP    +  +A     L E   Y     A  L              A++    ++   
Sbjct: 25  IERPKASADIAEARDKGDLSENAEYDAAKEAQGLLELKIKKMEEVYSNARLIDESQLDVS 84

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
              + S VK +N S+G      LV  ++      ++SV +P+G  LLG  VG+     +P
Sbjct: 85  KALVLSHVKIKNQSNGMEMSYHLVAESEADLKTGKISVTSPIGKGLLGKSVGEIAEITVP 144

Query: 113 GGVATHLEVLELEYQ 127
            G     EVLE+   
Sbjct: 145 NG-ILKFEVLEITRD 158


>UniRef50_Q1CX76 Transcription elongation factor, GreA/GreB family n=2
           Tax=Cystobacterineae RepID=Q1CX76_MYXXD
          Length = 167

 Score = 94.8 bits (235), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 24/95 (25%), Positives = 41/95 (43%), Gaps = 2/95 (2%)

Query: 32  DALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVM 91
             L A L+  ++  P+      V   + V+  +   G      +V P +      +LSV 
Sbjct: 72  QELAAVLEDVRVVEPDASQAGRVFFGAWVELEDEDGG-PVRYRIVGPDESDVKAGRLSVE 130

Query: 92  APVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
           +P+  ALLG  VG+S+  + P G      V  ++Y
Sbjct: 131 SPLARALLGKEVGESVVVDRPRG-PVEYTVTAVDY 164


>UniRef50_A6NPJ1 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus
           ATCC 29799 RepID=A6NPJ1_9BACE
          Length = 197

 Score = 94.8 bits (235), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 30/131 (22%), Positives = 52/131 (39%), Gaps = 9/131 (6%)

Query: 3   RPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMPHDVV 54
           RP ++    +A     L E   Y                L   +  A + S +  P D V
Sbjct: 55  RPQLLEAVKEARGFGDLSENFEYKAAKQEKNRNESRIRFLENMIRTAVVISDQAAP-DTV 113

Query: 55  TMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGG 114
            +  +V      D E     +V   +    + ++S  +PVG+ALLG RVGD I+ ++   
Sbjct: 114 GLYDKVTVYLEEDDETETYQVVTTMRQDALHGRISKESPVGSALLGKRVGDRIYIQVNDN 173

Query: 115 VATHLEVLELE 125
              ++ +  +E
Sbjct: 174 YGYYVVIKAIE 184


>UniRef50_Q4A759 Transcription elongation factor greA n=4 Tax=Mycoplasma
           RepID=GREA_MYCH7
          Length = 160

 Score = 94.8 bits (235), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 26/132 (19%), Positives = 52/132 (39%), Gaps = 11/132 (8%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHD 52
           + R  +I    DA     L E   Y                L   + +A++    ++   
Sbjct: 29  VERVNVIQEIKDARSQGDLSENAEYDVAREKQGIIESRIRELETIISKAKIIK-ADLGSS 87

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V++ S+V   N+  GE++   +V         +++S  +P+  ALLG   GD +  ++ 
Sbjct: 88  RVSIGSKVSLENVESGEIQTFQIVSSIDADPFKSKISNFSPIAQALLGQHQGDEVEVDV- 146

Query: 113 GGVATHLEVLEL 124
                 + +LE+
Sbjct: 147 -NEKYSVRILEV 157


>UniRef50_Q5SKM1 Transcription elongation factor n=5 Tax=Thermus RepID=Q5SKM1_THET8
          Length = 155

 Score = 94.8 bits (235), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 41/106 (38%), Gaps = 4/106 (3%)

Query: 20  LEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPA 79
             +  +        L   L RA +        D V +  +V+      GE     +V   
Sbjct: 52  ARRAMWQNEARIAQLEDLLSRAVIVENGSF--DQVALGCQVELE-TETGERLSLAIVGSH 108

Query: 80  KMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
           +    + ++S  +P+G ALLG +VGD +      G      +LE++
Sbjct: 109 EADIFSGKISDESPLGQALLGKKVGDVVEIRGKKGAQV-YTILEIK 153


>UniRef50_O51157 Transcription elongation factor greA n=23 Tax=Borrelia
           RepID=GREA_BORBU
          Length = 901

 Score = 94.4 bits (234), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 48/124 (38%), Gaps = 10/124 (8%)

Query: 13  AERIDILLEQPAYAGLPIADA--------LNAELDRAQMCSPEEMPHDVVTMNSRVKFRN 64
           A  +  L E   Y                L  E++ A++   +++   VV   ++V   N
Sbjct: 777 ARELGDLKENAEYHSAKEKQQFLTKRLNSLMLEIENAKVIDTKDLQSSVVGFGTKVVILN 836

Query: 65  LSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHL--EVL 122
              G+     ++ P +       +S  +P G  LL  R GDS+++ +      +   ++ 
Sbjct: 837 EVTGKDESYLILGPWESNPDEGIISYKSPFGENLLDSREGDSLNFVINNTNFKYFVKKIE 896

Query: 123 ELEY 126
            +++
Sbjct: 897 PIKF 900


>UniRef50_B1ZD84 GreA/GreB family elongation factor n=4 Tax=Methylobacterium
           RepID=B1ZD84_METPB
          Length = 149

 Score = 94.4 bits (234), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 39/124 (31%), Positives = 61/124 (49%), Gaps = 1/124 (0%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
            RP I +   D +R+          G P AD L ++L+RA   +    P DVV +  RV+
Sbjct: 6   KRPPITLPTYDFDRLVASGLAAYQRGDPYADLLLSKLERAASFAASPPPRDVVAVTCRVR 65

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWE-LPGGVATHLE 120
           +R   +  VR   LVYP  +  S  ++S  + +G A+LGLR GD I +     G    +E
Sbjct: 66  YRLDDEPTVRAHRLVYPGHVIASEEEISAASALGVAMLGLRRGDRIPFRDNATGSEHVVE 125

Query: 121 VLEL 124
           + ++
Sbjct: 126 IADV 129


>UniRef50_Q12SN9 Transcription elongation factor GreB n=17 Tax=Bacteria
           RepID=Q12SN9_SHEDO
          Length = 166

 Score = 94.1 bits (233), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 45/134 (33%), Gaps = 11/134 (8%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHDVV 54
           RP I      A  +    E   Y                L   ++  ++          V
Sbjct: 32  RPEITKKVAWAASLGDRSENADYKENKRLLRQIDGRVRFLRKRIEALKVVPYAAEQEGKV 91

Query: 55  TMNSRVKFRNLSDGEVRVRTLVYPAKM-TDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
              + V+  N  +G  +   +V P ++  D+   +S+ +P+  ALL   V D      P 
Sbjct: 92  FFGAWVEIEN-DEGVKKRFRIVGPDEIYGDAKGYISIDSPMARALLKKEVDDDASVLTPT 150

Query: 114 GVATHLEVLELEYQ 127
           G      + ++ YQ
Sbjct: 151 GEQFWY-INKIFYQ 163


>UniRef50_A5IYH4 Transcription elongation factor greA n=3 Tax=Mycoplasma
           RepID=GREA_MYCAP
          Length = 163

 Score = 94.1 bits (233), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 55/135 (40%), Gaps = 11/135 (8%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIAD--------ALNAELDRAQMCSPEEMPHD 52
           + RP +  +  +A     L E   Y                L   L+ A++   +    +
Sbjct: 29  VERPAVQASLKEARAQGDLSENAEYDAARDRQSEVERRILELERILENAEIIDTKSAVQN 88

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLR-VGDSIHWEL 111
              + + V++ N+   +  V T++ P        ++S  +PV  A++    +GD +  E+
Sbjct: 89  KAGIGATVRYLNMKTNKELVVTIMGPHDSNPIENKISNESPVAQAIMEANGIGDVVEVEV 148

Query: 112 PGGVATHLEVLELEY 126
           P     +++VL++ Y
Sbjct: 149 P--QKYNIKVLDISY 161


>UniRef50_B1H062 Transcription elongation factor n=1 Tax=uncultured Termite group 1
           bacterium phylotype Rs-D17 RepID=B1H062_UNCTG
          Length = 158

 Score = 93.7 bits (232), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 47/109 (43%), Gaps = 3/109 (2%)

Query: 20  LEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPA 79
            ++     +     L +++  A++   + +  D V +   V  ++   G      +V   
Sbjct: 50  AKETLANLIRRIMELTSKIACAKIIEEQNIDSDKVFIGVTVTIKD-EYGADYQYAIVDLE 108

Query: 80  KMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL-EYQ 127
           +      ++S+ +P+   LLG   G+++  ELP G     ++L++  YQ
Sbjct: 109 EADPVANRISIQSPLAQGLLGHTAGETVAVELPAGKT-KFKILKISRYQ 156


>UniRef50_D2RL35 GreA/GreB family elongation factor n=3 Tax=Veillonellaceae
           RepID=D2RL35_ACIFE
          Length = 172

 Score = 93.7 bits (232), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 23/130 (17%), Positives = 49/130 (37%), Gaps = 5/130 (3%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADAL--NAELDRAQMCSPEEMPHDVVTMNSR 59
            R  + I+  D        +            L     +  AQ+    ++  +VV++  +
Sbjct: 32  ERLKVAISYGDISENSEYDDAKNEQAFVEGRILTLENMIRNAQIIKDTDITKNVVSLGCK 91

Query: 60  VKFRNLSDGEVRVRTLVYPAKMTDSNT--QLSVMAPVGAALLGLRVGDSIHWELPGGVAT 117
           VK  ++   +    T+V   +        ++S  +PVG A+LG +VG  +    P G   
Sbjct: 92  VKIEDMETHDQEEYTVVGTTEADPMAEPPRISNESPVGKAILGQKVGAVVKVTTPIGE-L 150

Query: 118 HLEVLELEYQ 127
             +++ +   
Sbjct: 151 DYKIVAVSRP 160


>UniRef50_A0M1N1 GreA-like transcription elongation factor n=3 Tax=Flavobacteriaceae
           RepID=A0M1N1_GRAFK
          Length = 166

 Score = 93.7 bits (232), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 58/125 (46%), Gaps = 7/125 (5%)

Query: 8   INDLDAERIDILLEQPAYAGLPI------ADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
           + DL+ ER  +  E                + L+  L  A++   ++ P D +   +RVK
Sbjct: 43  LKDLEYERAHVEAENDTEKRRAQSLIDGKINLLSERLQTARLLDSKDQPKDEIRFGARVK 102

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
             N + G+++   +V   +      +++ +AP+  A+ G +VG+ I ++L G     L+V
Sbjct: 103 LTNETSGQLQEFQIVGVDEADIKKKKIAFVAPIAKAVTGRKVGEEIDFKL-GNEIRKLKV 161

Query: 122 LELEY 126
           L + Y
Sbjct: 162 LGITY 166


>UniRef50_B9KZF4 Transcription elongation factor greA n=2 Tax=Thermomicrobia (class)
           RepID=B9KZF4_THERP
          Length = 156

 Score = 93.3 bits (231), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 3/98 (3%)

Query: 28  LPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQ 87
                 +   L RAQM      P D V + SRV   +   G V    +V P +   +  +
Sbjct: 62  EARIREIEHILRRAQMI-TRAGPQDEVRLGSRVTVIDEE-GSVETWVIVSPEEANAAQGR 119

Query: 88  LSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
           +S+ +PVGAALLG RVG ++    PGG      +  +E
Sbjct: 120 ISIESPVGAALLGKRVGTTVTVRAPGGE-MRFTIQRIE 156


>UniRef50_A5VME9 Transcription elongation factor GreA n=49 Tax=Lactobacillaceae
           RepID=A5VME9_LACRD
          Length = 165

 Score = 93.3 bits (231), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 51/131 (38%), Gaps = 11/131 (8%)

Query: 3   RPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMPHDVV 54
           RP  I     A  +  L E   Y                LN +L  A++ +P+      +
Sbjct: 37  RPAKIEQLKAARALGDLSENTEYSTAKRELRHLESRLRYLNKQLQYAEIVTPKN--DHTI 94

Query: 55  TMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGG 114
            + + V      D E     +V   +   +  ++S  +P+G A+L    G ++  E P  
Sbjct: 95  DLGTTVTIEFEDDHEQETYHIVGKQEADLAKQKISFDSPLGQAILHQTAGTTVTVEAPQ- 153

Query: 115 VATHLEVLELE 125
            +  ++++++E
Sbjct: 154 SSYKVKIVKVE 164


>UniRef50_A2SJD8 Transcription elongation factor n=50 Tax=Proteobacteria
           RepID=A2SJD8_METPP
          Length = 213

 Score = 93.3 bits (231), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 34/139 (24%), Positives = 53/139 (38%), Gaps = 11/139 (7%)

Query: 2   SRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMPH-D 52
            RP ++     A +     E   Y                L   L+ A++  P      D
Sbjct: 77  ERPKVVETVSWAAKNGDRSENGDYLYGKKRLREIDRRIRFLTKRLEIAEVADPSVHRGSD 136

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V   + V +    DG  R  T+    +  +   ++S ++PV  ALL  RVGD +    P
Sbjct: 137 QVFFGATVTYA-APDGVERTITIKGIDEADNLQAEVSWISPVARALLKARVGDEVTLLTP 195

Query: 113 GGVATHLEVLELEYQPEAA 131
            G    +EV+E+ Y P  A
Sbjct: 196 QG-PQTIEVIEVRYPPRPA 213


>UniRef50_C5BN87 Transcription elongation factor GreB n=5 Tax=Proteobacteria
           RepID=C5BN87_TERTT
          Length = 172

 Score = 93.3 bits (231), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 46/133 (34%), Gaps = 10/133 (7%)

Query: 2   SRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMPHDV 53
            RP +      A  +    E   Y                L   +D  ++    +     
Sbjct: 41  ERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYLRKRIDSLKVVRYAKEQEGS 100

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           V   S VK  N   GE +   +V   ++      +S+ +P+  ALL  +VGD    +   
Sbjct: 101 VYFGSWVKIEN-EAGENKELRIVGYDEIFGEKNYISIDSPMAKALLRKKVGDEAIVKTEV 159

Query: 114 GVATHLEVLELEY 126
           G     E++E+ Y
Sbjct: 160 GEFC-WEIMEISY 171


>UniRef50_Q2S2N3 Transcription elongation factor n=1 Tax=Salinibacter ruber DSM
           13855 RepID=Q2S2N3_SALRD
          Length = 164

 Score = 92.9 bits (230), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 49/133 (36%), Gaps = 9/133 (6%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHDV 53
            R  I     +A     L E   Y                +   + RA++     +    
Sbjct: 33  ERSRIADEIAEARAKGDLSENAEYDAAKEEQGKLEARIKQIEDTIARARIVDESTVDDSK 92

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
             + S V   NL  G+ +  TLV   +   S  ++SV +P+G  LL    GD +  ++P 
Sbjct: 93  AYILSDVTVENLDTGDEQTFTLVSEEEANISENKISVDSPIGEGLLAQEEGDEVSIDVPA 152

Query: 114 GVATHLEVLELEY 126
           G   H ++ ++  
Sbjct: 153 GT-VHFKIKDISR 164


>UniRef50_A2RGA4 Transcription elongation factor greA n=111 Tax=Firmicutes
           RepID=GREA_STRPG
          Length = 160

 Score = 92.9 bits (230), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 51/133 (38%), Gaps = 9/133 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADA--------LNAELDRAQMCSPEEMPHD 52
           + RP I+     A     L E   Y       A        L  ++  A++   + +  D
Sbjct: 26  VRRPEIVERIKIARSYGDLSENSEYDAAKDEQAFVEGQISTLETKIRYAEIIDSDAVAKD 85

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V +   V  + +   +     +V  A     + ++S  +P+  AL+G + GD +  E P
Sbjct: 86  EVAIGKTVIVQEVGTTDKDTYHIVGAAGADIFSGKISNESPIAQALIGKKTGDKVRIESP 145

Query: 113 GGVATHLEVLELE 125
                 +E++ +E
Sbjct: 146 A-ATYDVEIISVE 157


>UniRef50_B1AIU2 Transcription elongation factor greA n=28 Tax=Ureaplasma
           RepID=GREA_UREP2
          Length = 156

 Score = 92.9 bits (230), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 23/132 (17%), Positives = 45/132 (34%), Gaps = 9/132 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIA--------DALNAELDRAQMCSPEEMPHD 52
           +  P I     DA     L E   Y              D +   L+  ++        D
Sbjct: 24  VKWPAITKQLQDAREQGDLSENADYDAAKNEQAALKKRKDEIEEILENYELIEDVLRSTD 83

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V++ S ++  N       V TLV          ++S+  P+G AL+  + G  +     
Sbjct: 84  EVSIGSTIEIYNYQKDCEEVITLVGSMDSDPFANKISIDTPLGKALVKQKKGTEVTVHTL 143

Query: 113 GGVATHLEVLEL 124
                 ++++++
Sbjct: 144 A-SPYKVKIIKI 154


>UniRef50_Q13CU9 Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris
           BisB5 RepID=Q13CU9_RHOPS
          Length = 156

 Score = 92.5 bits (229), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 42/127 (33%), Positives = 60/127 (47%), Gaps = 2/127 (1%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKF 62
            P + I   D  R+  +  Q   +  P+   L +EL+RA +      P   V ++  V F
Sbjct: 2   NPPVSIASRDFGRLRQIAVQALASRDPVGRFLFSELERAVVID-SPAPPLTVRLDDWVTF 60

Query: 63  RNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVL 122
           R   D  +  R LV P     +   LSV++PVGAAL+GLR G  +H++   GV     V 
Sbjct: 61  RADDDQPLESRILVLPGHYRRNALHLSVLSPVGAALVGLRPGARMHYQGVDGVQHVATVE 120

Query: 123 ELEYQPE 129
            LE  PE
Sbjct: 121 SLE-PPE 126


>UniRef50_B5ZLJ0 Transcription elongation factor GreB n=5 Tax=Proteobacteria
           RepID=B5ZLJ0_GLUDA
          Length = 180

 Score = 92.5 bits (229), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 27/111 (24%), Positives = 45/111 (40%), Gaps = 3/111 (2%)

Query: 22  QPAYAGLPIADALNAELDRAQMCSPE-EMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAK 80
           +           L   +++A +  P  +   D V   + V +    D   R   +V   +
Sbjct: 70  KRLREIDRRVRFLTRRIEKAIVVDPAAQTRRDRVFFGATVTYVTEDD-TERTVVIVGVDE 128

Query: 81  MTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQPEAA 131
              +  Q+S+ +PV  ALLG RVGD +    P G    +E+L + Y   A 
Sbjct: 129 SDLAAGQVSLASPVARALLGGRVGDEVRLLTPAGAEM-IEILRIAYPAPAE 178


>UniRef50_Q9JVD0 Transcription elongation factor greB n=64 Tax=Bacteria
           RepID=GREB_NEIMA
          Length = 163

 Score = 92.5 bits (229), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 29/134 (21%), Positives = 48/134 (35%), Gaps = 11/134 (8%)

Query: 2   SRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPE-EMPHD 52
            RP I+     A       E   Y                L   L+ A +  PE     D
Sbjct: 28  ERPEIVQIVNWAAGNGDRSENGDYLYGKRRMREIDRRIRFLTKRLEAAVVVDPELREATD 87

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V   + V      DG  +   +V   ++  +  ++S ++P+   L+  R GD +    P
Sbjct: 88  QVFFGATVGLL-RGDGREQTVKIVGIDEIDTAQNKISWISPLARCLIKAREGDEVVLNTP 146

Query: 113 GGVATHLEVLELEY 126
            G    +E+L +EY
Sbjct: 147 EGRE-EIEILSVEY 159


>UniRef50_Q2N9J5 Transcription elongation factor n=2 Tax=Erythrobacter
           RepID=Q2N9J5_ERYLH
          Length = 159

 Score = 92.5 bits (229), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 40/107 (37%), Gaps = 3/107 (2%)

Query: 21  EQPAYAGLPIADALNAELDRAQMCSPEEMPH-DVVTMNSRVKFRNLSDGEVRVRTLVYPA 79
            +           L   +  A++  P E P  D     + +   +  D   +  TLV   
Sbjct: 54  RKRMREIDRELAHLARRMKHARVIEPSEQPDKDRAFFGATLTLADEDD-ARKTVTLVGDD 112

Query: 80  KMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
           +   S  ++   +P+  AL G RVGD     LP G     EV+ + Y
Sbjct: 113 EQDASAGKIGWSSPLARALRGARVGDLRTVHLPSGE-REWEVMAIAY 158


>UniRef50_C5BTE2 Transcription elongation factor GreA n=1 Tax=Teredinibacter
           turnerae T7901 RepID=C5BTE2_TERTT
          Length = 126

 Score = 92.5 bits (229), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 37/108 (34%)

Query: 17  DILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLV 76
             L    +      A  L   L  A +   +++    V   S V   ++ + E +   +V
Sbjct: 15  RELEANLSSLPDTDAAELRTRLASATVVDNDDIMGGRVQFGSLVTVFSIDEEEEQSFQIV 74

Query: 77  YPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
              +       L   +P+  AL G R G+ +   L  G     EV  +
Sbjct: 75  SSDESLSGRGLLDQRSPLAQALFGAREGEVVRVLLQNGSNCDYEVTHI 122


>UniRef50_Q4K5S3 Transcription elongation factor GreB n=3 Tax=Pseudomonas
           RepID=Q4K5S3_PSEF5
          Length = 197

 Score = 91.7 bits (227), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 46/109 (42%), Gaps = 3/109 (2%)

Query: 17  DILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLV 76
           D   +Q               L  AQ+ +      D V + SRV F +  D   +   LV
Sbjct: 90  DDADKQRMAELERDLRYFTQRLHSAQVVTTAN-STDKVQIGSRVTFADEQD-RQQSVQLV 147

Query: 77  YPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
              +   +   ++  +P+G ALLG + GD + W+ P G    +E++ +E
Sbjct: 148 GEDQADAAKGLINWASPLGRALLGAQPGDEVLWQRPAGNQL-IEIIRIE 195


>UniRef50_A9BFC0 Transcription elongation factor greA n=12 Tax=Thermotogaceae
           RepID=GREA_PETMO
          Length = 159

 Score = 91.7 bits (227), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 52/123 (42%), Gaps = 9/123 (7%)

Query: 12  DAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPE-EMPHDVVTMNSRVKF 62
           +A  +  L E   Y                ++  LD A++        +  V++  +VK 
Sbjct: 37  EARELGDLSENSEYEEAKNEQGMIDSRIKEIDYILDNAEIIENGGNHDNSTVSLGKKVKI 96

Query: 63  RNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVL 122
           ++      +   LV P +      ++S+ +P+G +LLG + G+ I+ +   G +  +E+ 
Sbjct: 97  KDYRLNREQEFVLVTPQEANIEENKISIESPIGRSLLGRKKGEVINIKTARGSSKKIEIK 156

Query: 123 ELE 125
           E+ 
Sbjct: 157 EIS 159


>UniRef50_B2S1W7 Transcription elongation factor greA n=6 Tax=Treponema
           RepID=GREA_TREPS
          Length = 162

 Score = 91.7 bits (227), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 25/119 (21%), Positives = 49/119 (41%), Gaps = 9/119 (7%)

Query: 15  RIDILLEQPAYAGLPIAD--------ALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLS 66
            +  L E   Y                L  E++RAQ+  P  +    V+  + +  +N +
Sbjct: 41  ELGDLRENAEYKAAREEQTRLNNMVTRLQEEIERAQVFDPTTVVAGRVSFGTVISLKNHT 100

Query: 67  DGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
            GE    T++ P +       +S M+P+G+ LL  + G+ + + + G      E+L + 
Sbjct: 101 SGEDETYTILGPWESAPERGIISYMSPLGSNLLNRKTGEQLAFTV-GEHEKVYEILSIS 158


>UniRef50_B4UMG4 GreA/GreB family elongation factor n=4 Tax=Anaeromyxobacter
           RepID=B4UMG4_ANASK
          Length = 169

 Score = 91.4 bits (226), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 33/116 (28%), Positives = 43/116 (37%), Gaps = 3/116 (2%)

Query: 12  DAERIDILLEQPAYAG-LPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEV 70
           DA R+                 AL+A L    +  PE  P   V   + V      DG  
Sbjct: 52  DAARLPDAERPARLGELDARIAALDATLGALTVLGPEATPEGQVGFGTWVTVE-EEDGRR 110

Query: 71  RVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
               LV P +       +S  +PV  ALLG R GD +    PGG A  L V+ +  
Sbjct: 111 VTWRLVGPDEADARRGLISAGSPVARALLGRRAGDVVEVNRPGGEA-ELTVVAVRR 165


>UniRef50_B4D5K0 GreA/GreB family elongation factor n=1 Tax=Chthoniobacter flavus
           Ellin428 RepID=B4D5K0_9BACT
          Length = 169

 Score = 91.4 bits (226), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 44/111 (39%), Gaps = 2/111 (1%)

Query: 17  DILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLV 76
             +             AL+  L  A++ +  E   D V     V  R+ + G      +V
Sbjct: 60  GEISRDELRRVTSRMQALSQRLADAEVIAISESRGDEVRFGMFVTIRD-AGGVEDEYRIV 118

Query: 77  YPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQ 127
              ++      +S ++P+  A++G ++GD + ++ P G    L ++ +   
Sbjct: 119 GVDEVDLEAGWISWLSPLAQAIVGRKIGDVVQFQAPAGE-KKLHIVAVRPP 168


>UniRef50_B2V1C0 Transcription elongation factor n=28 Tax=Clostridium
           RepID=B2V1C0_CLOBA
          Length = 155

 Score = 91.4 bits (226), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 29/134 (21%), Positives = 54/134 (40%), Gaps = 9/134 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAG--------LPIADALNAELDRAQMCSPEEMPHD 52
           + R  I    L A       E   Y                L   +  A +    E+   
Sbjct: 23  VKRAEIAKEKLVAAAHGDRSENAEYKEACANYRENDNRIQYLMTMISTATVIDDTEIDKS 82

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            + +NS+ + + + D +  V TLV    +   N  +S+ + +G AL+G + G+++  E P
Sbjct: 83  SLGINSKARIKFVEDDDEDVITLVTTMDLDPENMLISIESDLGKALMGKKAGETVEVEAP 142

Query: 113 GGVATHLEVLELEY 126
            G    +++LE+ Y
Sbjct: 143 -GAKYTVKILEILY 155


>UniRef50_D2QK34 GreA/GreB family elongation factor n=1 Tax=Spirosoma linguale DSM
           74 RepID=D2QK34_9SPHI
          Length = 171

 Score = 91.0 bits (225), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 26/98 (26%), Positives = 46/98 (46%), Gaps = 2/98 (2%)

Query: 30  IADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGE-VRVRTLVYPAKMTDSNTQL 88
              ALN  +  A++ + ++ P D V   + V   + S G+  +  T+V   +    + ++
Sbjct: 73  QIAALNQRIATAKVVNMQDHPLDEVRFGATVTLSSQSTGKADQQLTIVGVDEADAIHGRI 132

Query: 89  SVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
           +  AP+   LLG +VGD I    P G    LE+  + Y
Sbjct: 133 AFPAPIARLLLGKKVGDFITLRTPRGENA-LEITSIYY 169


>UniRef50_Q04UP0 Transcription elongation factor n=6 Tax=Leptospira
           RepID=Q04UP0_LEPBJ
          Length = 927

 Score = 91.0 bits (225), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 29/121 (23%), Positives = 47/121 (38%), Gaps = 9/121 (7%)

Query: 12  DAERIDILLEQPAYAGL--------PIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFR 63
           +A+    L E   Y                L AE+  A +     +  D + +    K +
Sbjct: 798 EAQERGDLRENAEYKAAMERQVQLQAAIKRLEAEIKSAIILDLTNVKTDKINIGVTAKLK 857

Query: 64  NLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLE 123
           N S GEV   +++           +S  +P+  +LLG +VGD+    L  G  T   VLE
Sbjct: 858 NESTGEVVAYSILGAWDADTEKHIISYQSPLAKSLLGKKVGDAAVLNL-TGAETRYTVLE 916

Query: 124 L 124
           +
Sbjct: 917 I 917


>UniRef50_B5Y9H5 Transcription elongation factor n=1 Tax=Coprothermobacter
           proteolyticus DSM 5265 RepID=B5Y9H5_COPPD
          Length = 163

 Score = 91.0 bits (225), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 56/133 (42%), Gaps = 9/133 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIAD-ALNAELDR-------AQMCSPEEMPHD 52
           + R  +     +A  +  L E   +         L   + R       A++   E++  D
Sbjct: 28  VKRKEVAEKIQEARALGDLSENSEFEAAKEEQALLEERIARLETLVYNARVVKAEDLALD 87

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVY-PAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWEL 111
            V++ ++V   + S G      +V    ++   + ++S  +P+G+ LLG + GD +  +L
Sbjct: 88  QVSVGTKVLVLDESAGREESFIIVGNSEEVDPFSGKISSKSPLGSRLLGRKRGDRVEIKL 147

Query: 112 PGGVATHLEVLEL 124
             G     E+L++
Sbjct: 148 RNGSKAVYEILDI 160


>UniRef50_C7T958 Transcription elongation factor n=4 Tax=Lactobacillus rhamnosus
           RepID=C7T958_LACRG
          Length = 165

 Score = 91.0 bits (225), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 31/138 (22%), Positives = 54/138 (39%), Gaps = 13/138 (9%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGL-PIADALNAELDR-------AQMCSPEEMPHDVV 54
           RP  I N  +A  +    E   Y+        L   L         A++ +P     ++ 
Sbjct: 26  RPAKIKNLAEAAALGDRSENAEYSAAKRELRQLEGRLRYLDKLIRYAKVTTPAA--ANLA 83

Query: 55  TMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGG 114
            + + V      D +     LV PA+      +L++ +P+GAA+    VGD++    P G
Sbjct: 84  DIGNWVTLEFDDDQDEDTYELVGPAEAGMGAAKLAINSPLGAAVRRHHVGDTVTVTAPSG 143

Query: 115 VATHLEVLELEYQPEAAG 132
               + V+ +   P A G
Sbjct: 144 TYQ-VTVMAIS--PHAPG 158


>UniRef50_A6NZ08 Transcription elongation factor n=1 Tax=Bacteroides capillosus ATCC
           29799 RepID=A6NZ08_9BACE
          Length = 157

 Score = 91.0 bits (225), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 41/106 (38%), Gaps = 1/106 (0%)

Query: 20  LEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPA 79
            +            +   L+   +   E      V + S++K  ++   E     +V   
Sbjct: 52  AKNEQGKLYSRIAEVENILENCVVIEEEIHDGKTVRLGSKLKVLDVEFNEELDYEVVGSQ 111

Query: 80  KMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
           +    N ++S  +P G ALLG  VG+ +  E P G   H +VL + 
Sbjct: 112 EADPMNGRISEDSPFGRALLGKSVGEDVVVEAPAGA-LHYKVLSIS 156


>UniRef50_C8W826 Transcription elongation factor n=7 Tax=Coriobacteriaceae
           RepID=C8W826_ATOPD
          Length = 159

 Score = 91.0 bits (225), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 18/118 (15%), Positives = 43/118 (36%), Gaps = 7/118 (5%)

Query: 9   NDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDG 68
           ++ DA + +              + +   L  A++          V + + V+  +   G
Sbjct: 49  SEYDAAKEEQ------SHNESRINEIRQILSVAKVVEGGSKRKVTVAIGTTVELADAK-G 101

Query: 69  EVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
           +     +V   +      ++S  +P G AL+G + GD + +  P G      ++ +  
Sbjct: 102 KTTKYVIVGTTETNSLEHKISNESPAGEALIGHKKGDEVEFTTPNGKVKKYTIISITR 159


>UniRef50_B7CAB2 Transcription elongation factor n=5 Tax=Erysipelotrichaceae
           RepID=B7CAB2_9FIRM
          Length = 162

 Score = 91.0 bits (225), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 52/136 (38%), Gaps = 14/136 (10%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPE-----EM 49
           R  +I+   +A     L E   Y                L A +  A++ +       + 
Sbjct: 28  RQEVIVELQEARAQGDLSENADYDAAREHQAQVEGRIRELEAMIKNAEIITESADVEDKK 87

Query: 50  PHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHW 109
             +VV + S VK  +LSD +     +V   +    N +LS   P+   ++  +VGD    
Sbjct: 88  KKNVVKLGSTVKILDLSDNQEVTFNIVGTIEADPFNGKLSNTTPLAEVIMDHKVGDVCTV 147

Query: 110 ELPGGVATHLEVLELE 125
           +        +++LE++
Sbjct: 148 K-RVEEPYDVKILEIK 162


>UniRef50_Q848L1 GreA n=1 Tax=uncultured bacterium RepID=Q848L1_9BACT
          Length = 597

 Score = 90.6 bits (224), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 29/123 (23%), Positives = 46/123 (37%), Gaps = 11/123 (8%)

Query: 14  ERIDILLEQPAYAGLPIADA--LNAELDR-------AQMCSPEEMPHDVVTMNSRVKFRN 64
           +R D LL  P       ++   L  EL +       A +      P D V   + V   +
Sbjct: 477 QRRDELLASPDDDLPERSELATLERELAQVSAVLQGAIVIRLASPPRDEVRFGAEVVVED 536

Query: 65  LSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
              G      LV   +       ++  +P+G AL G R+G  + W  P G   ++ V E+
Sbjct: 537 -DRGSRSRFQLVGENEAAPERGLVNWFSPLGRALAGARLGQRVEWTTPAGRGAYV-VREI 594

Query: 125 EYQ 127
            Y 
Sbjct: 595 SYP 597


>UniRef50_B0VIH5 Putative transcription elongation factor n=1 Tax=Candidatus
           Cloacamonas acidaminovorans RepID=B0VIH5_9BACT
          Length = 159

 Score = 90.6 bits (224), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 29/136 (21%), Positives = 53/136 (38%), Gaps = 13/136 (9%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHDV 53
            RP +I     A     L E   Y              D L       ++    E P D+
Sbjct: 25  ERPEVIKAVAIAREFGDLSENAEYKAARERQRAIDNEIDYLRRRSANLKVIDTSEFPKDM 84

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSN----TQLSVMAPVGAALLGLRVGDSIHW 109
           V   +     +++  E     LV P ++   N     ++S+++P+G ALL  ++G+    
Sbjct: 85  VRFGTYCVAEDINTKECICYHLVGPEELNYYNEEGIQEVSIVSPIGKALLSKKIGEIAIV 144

Query: 110 ELPGGVATHLEVLELE 125
           + P G    L++ E++
Sbjct: 145 KAPIGE-RKLKIREIK 159


>UniRef50_A0LES5 GreA/GreB family elongation factor n=1 Tax=Syntrophobacter
           fumaroxidans MPOB RepID=A0LES5_SYNFM
          Length = 155

 Score = 90.6 bits (224), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 41/106 (38%), Gaps = 1/106 (0%)

Query: 19  LLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYP 78
           L  +           L  +L   ++    +         + V  +N+  GE +   LV P
Sbjct: 49  LARERHMVLQKKIQDLERKLASCEIVVGRKFFFKQAEFGTIVVIQNIETGETQRYQLVGP 108

Query: 79  AKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
            +    + +LS+ +PVG  L+G R G+ +    P G      V+ +
Sbjct: 109 YESNVVDGKLSIDSPVGRHLVGRREGEEVLVYTPAG-VRMYRVVSI 153


>UniRef50_Q0B0N4 Transcription elongation factor greA n=6 Tax=Clostridia
           RepID=GREA_SYNWW
          Length = 159

 Score = 90.6 bits (224), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 51/106 (48%), Gaps = 1/106 (0%)

Query: 20  LEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPA 79
            +           +L   L +A++   E++  DVV++ SR+  + +  G     TLV   
Sbjct: 54  AKNEQAFIEGRIISLEKTLKKARLMEDEDIRTDVVSLGSRITLKEMKSGREVTVTLVSSV 113

Query: 80  KMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
           +    + ++S  +PVG A++G +V  ++  E P G     +++++E
Sbjct: 114 ESKLKDGKISDESPVGKAIMGKKVKSTVSVEAPAGTI-KYKIIKVE 158


>UniRef50_B0P8A6 Transcription elongation factor n=1 Tax=Anaerotruncus colihominis
           DSM 17241 RepID=B0P8A6_9FIRM
          Length = 151

 Score = 90.2 bits (223), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 53/116 (45%), Gaps = 7/116 (6%)

Query: 9   NDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDG 68
           ++ D  + +  + +           L  +L   ++   +++  DVV++ SRVK  ++   
Sbjct: 41  SEYDEAKNEQAVVEAR------IKKLEDQLKHVKIIERDQISTDVVSVGSRVKILDMDYD 94

Query: 69  EVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
           E  V T+    +  +    +S  +PVG  L+G +VGD +    P      L++LE+
Sbjct: 95  EEMVYTIASSVESHNDLESISDESPVGKGLIGHKVGDVVEIHAPA-AVLKLKILEI 149


>UniRef50_B9L0L0 Transcription elongation factor greA n=1 Tax=Thermomicrobium roseum
           DSM 5159 RepID=GREA_THERP
          Length = 156

 Score = 90.2 bits (223), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 34/133 (25%), Positives = 53/133 (39%), Gaps = 12/133 (9%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCS-PEEMPHD 52
            RP I     +A     + E  AY                +   L R ++   P +    
Sbjct: 27  RRPEIARVIQEAREHGDIRENAAYDAAKHDQAFIEGRIREIEELLKRVELIEQPTDGDRS 86

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
           VV + S V      DGE+   T+V   +   S  ++S  +PVG ALLG R G+ +  E P
Sbjct: 87  VVRVGSTVTIEI--DGEIETYTIVGAIEAKPSAGRISNESPVGRALLGHRAGEIVPIETP 144

Query: 113 GGVATHLEVLELE 125
            G      ++E++
Sbjct: 145 NGTLM-ARIIEVQ 156


>UniRef50_B3DVF3 Transcription elongation factor GreA fused to uncharacterized
           associated domain n=1 Tax=Methylacidiphilum infernorum
           V4 RepID=B3DVF3_METI4
          Length = 614

 Score = 89.8 bits (222), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 45/135 (33%), Gaps = 11/135 (8%)

Query: 3   RPTIIINDLDAERID---ILLEQPAYAGLPIAD--------ALNAELDRAQMCSPEEMPH 51
           R  I  N  D         L E   Y                L + + RA+      +  
Sbjct: 472 RKKIPENSKDIAHARSYGDLRENHEYKAAKEMQVVLMRRKAELESMISRARATDFSNVDT 531

Query: 52  DVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWEL 111
             V + + V + +L         ++       S   +S +A  G +LLG + GD +   L
Sbjct: 532 TTVNIGTVVSYTDLKTNRTNSVAILGAWDSNPSKGIISYLAAFGQSLLGHKTGDVLQVSL 591

Query: 112 PGGVATHLEVLELEY 126
             G+ T + + ++  
Sbjct: 592 EDGITTEIRIDKISR 606


>UniRef50_D1C6T4 Transcription elongation factor n=1 Tax=Sphaerobacter thermophilus
           DSM 20745 RepID=D1C6T4_SPHTD
          Length = 157

 Score = 89.4 bits (221), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 40/109 (36%), Gaps = 4/109 (3%)

Query: 18  ILLEQPAYAGLPIADALNAELDRAQMCSPEEM-PHDVVTMNSRVKFRNLSDGEVRVRTLV 76
              +            +   L RA++          VV + S V      DG     T+V
Sbjct: 51  DAAKHDQAFIEGRIREIEDILRRAEVIDEAPNGDARVVRLGSTVTIEI--DGAQETYTIV 108

Query: 77  YPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
              +   +  ++S  +P G ALLG R G+ +  + P     H  ++ +E
Sbjct: 109 GAVEAKPAAGRISNESPFGRALLGHREGEEVEIQTPA-AVLHARIVNVE 156


>UniRef50_D1CDC6 Transcription elongation factor n=1 Tax=Thermobaculum terrenum ATCC
           BAA-798 RepID=D1CDC6_THET1
          Length = 159

 Score = 89.4 bits (221), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 28/109 (25%), Positives = 45/109 (41%), Gaps = 6/109 (5%)

Query: 20  LEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPA 79
            +            L   L  A++      P   V + S+V      +G     T+V  A
Sbjct: 54  AKHSQAFLEGRIKELEKLLANAEVIDRSAQPAGTVGLGSKVTVE--ENGRTYTYTIVDGA 111

Query: 80  KMTDSNT---QLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
           +         ++S  + VG+ALLG RVGDS+  E+P G     ++L +E
Sbjct: 112 EAGRGRDGEVRISSKSAVGSALLGRRVGDSVEVEVPAG-KLTFKILSVE 159


>UniRef50_Q88ZS9 Transcription elongation factor greA 1 n=7 Tax=Lactobacillus
           RepID=GREA1_LACPL
          Length = 156

 Score = 89.4 bits (221), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 45/118 (38%), Gaps = 14/118 (11%)

Query: 9   NDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDG 68
              D  R++  L             LN +L  AQ+  P +  +D + +   V    L D 
Sbjct: 52  AKRDLGRLESRL-----------RYLNKQLQYAQIVQPAD--NDQLDIGKFVTIEFLDDH 98

Query: 69  EVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
           +     LV   +      ++S  +P+G AL    V D +    P G    ++V+ ++ 
Sbjct: 99  DQITYQLVGKQEANLEQQKISFTSPIGQALANHTVDDVVTVNAPNGAYQ-VKVIAVKR 155


>UniRef50_B1XUH7 Transcription elongation factor GreB n=2 Tax=Polynucleobacter
           necessarius RepID=B1XUH7_POLNS
          Length = 168

 Score = 89.4 bits (221), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 47/113 (41%), Gaps = 9/113 (7%)

Query: 22  QPAYAGLPIADALNAELDRAQMCSPE-----EMPHDVVTMNSRVKF---RNLSDGEVRVR 73
           +           LN  L+ A +         E   D V   + V +        G+    
Sbjct: 54  KRLREIDRRIRFLNKRLEFAIVVDNSARKSGENDADQVFFGASVTYSALEGPEAGKRTSI 113

Query: 74  TLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
           T+V   ++    + +S ++P+  AL+  R+GD +  + P G  T +E+L+++Y
Sbjct: 114 TIVGVDEVDLDKSHVSWVSPIAKALIKSRIGDCVFIQTPTG-PTEIEILDVQY 165


>UniRef50_D0WJ76 Transcription elongation factor n=1 Tax=Slackia exigua ATCC 700122
           RepID=D0WJ76_9ACTN
          Length = 161

 Score = 89.1 bits (220), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 3/107 (2%)

Query: 20  LEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPA 79
            +            +N  L  A +    +   + V + S V       G  RV T+V  A
Sbjct: 58  AKNEQGLMEARIAQINDILSNAVLVEAPK-RSNRVNIGSTVTV--DMGGRERVFTIVGAA 114

Query: 80  KMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
           +   S+ ++S  +PVGAALLG + GD    E P G    ++++++E+
Sbjct: 115 EADVSSGKISNESPVGAALLGGKKGDHFTAEGPTGRVIEMDIVKIEH 161


>UniRef50_B0N6V6 Transcription elongation factor n=4 Tax=Bacteria RepID=B0N6V6_9FIRM
          Length = 161

 Score = 89.1 bits (220), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 27/138 (19%), Positives = 54/138 (39%), Gaps = 14/138 (10%)

Query: 1   MSRPTIIINDLDAERID-ILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPH 51
           + RP + I +L   R    L E   Y                ++  L  A++ S E+M  
Sbjct: 26  VERPKV-IEELQLARSQGDLSENADYDAAREKQAHLESRIKEIDYMLQNAEVISEEQMDL 84

Query: 52  DVVTMNSRVKFRN--LSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHW 109
            VV   + V   +    D E     +V   +    N ++S  +P+  A+LG  V + +  
Sbjct: 85  KVVKPGTTVTILDLSEKDAEPESYQIVGYTETDPLNGKISNESPLAKAVLGHGVNEIVTV 144

Query: 110 ELPGGVATHLEVLELEYQ 127
            +       ++++ +E++
Sbjct: 145 GVAD--PYDVKIVNIEFK 160


>UniRef50_A6STV7 Transcription elongation factor GreB n=2 Tax=Oxalobacteraceae
           RepID=A6STV7_JANMA
          Length = 175

 Score = 89.1 bits (220), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 45/108 (41%), Gaps = 3/108 (2%)

Query: 21  EQPAYAGLPIADALNAELDRAQMCSPE-EMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPA 79
           E            L   ++ A++         D +   + V + N + GE    T+V   
Sbjct: 67  EASLREIEQRIHYLQTRVESAEVVDASVHADGDRIFFGASVDYEN-TAGETHTATIVGLD 125

Query: 80  KMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQ 127
           ++  +  ++S ++P+  +LLG   GD++  + P G    L VL + Y 
Sbjct: 126 ELDPAQGRISWLSPLAQSLLGAEEGDTVLLQTPAG-PEELHVLTVRYP 172


>UniRef50_A7HXN3 GreA/GreB family elongation factor n=1 Tax=Parvibaculum
           lavamentivorans DS-1 RepID=A7HXN3_PARL1
          Length = 171

 Score = 88.3 bits (218), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 35/125 (28%), Positives = 61/125 (48%), Gaps = 1/125 (0%)

Query: 7   IINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLS 66
           ++   D  R+++   +      P+   + A+L+ A++ S  E+   V T+ S V++R + 
Sbjct: 26  LLTRHDFARLELACFEQLDLLNPMQPFVRAKLEEARIVSGNEIAETVATLGSIVRYR-IE 84

Query: 67  DGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
           D  +  R L    +   +   LSV+ P+G ALLG   GD    EL  G    + +  +E+
Sbjct: 85  DRMLERRLLQLDNRHAPNGQYLSVLTPIGLALLGRSTGDLCEAELFNGAKLTIRIALIEH 144

Query: 127 QPEAA 131
           QPEA 
Sbjct: 145 QPEAE 149


>UniRef50_C7N7T1 Transcription elongation factor n=1 Tax=Slackia heliotrinireducens
           DSM 20476 RepID=C7N7T1_SLAHD
          Length = 155

 Score = 87.9 bits (217), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 28/107 (26%), Positives = 46/107 (42%), Gaps = 3/107 (2%)

Query: 20  LEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPA 79
            +            +N  L  A +    +   + VT+ S V       G  RV T+V  A
Sbjct: 52  AKNEQGMLEVRIAQINDILANATVVEAPK-RSNRVTVGSTVTV--DMGGRERVFTIVGGA 108

Query: 80  KMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
           +   +  ++S  +PVG+ LLG + GD +  E P G    + VL +E+
Sbjct: 109 EANAAEGKISNDSPVGSVLLGSKKGDQLTTEGPTGRKIEITVLNIEH 155


>UniRef50_B3PM73 Transcription elongation factor greA n=1 Tax=Mycoplasma arthritidis
           158L3-1 RepID=GREA_MYCA5
          Length = 159

 Score = 87.9 bits (217), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 48/131 (36%), Gaps = 11/131 (8%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPH-DV 53
           RP +I    +A     L E   Y                +   LD  ++   +      V
Sbjct: 30  RPQVIEEIKEARNQGDLSENAEYDAARDKQATIENEITEIQHILDNYEIIKTQTNRQVSV 89

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           V + S V   +L D  V    +V        N ++S  +P+  A++G + G+ +  E P 
Sbjct: 90  VRIGSNVSVVSLKDDTVINFQIVGALDTDPFNGKISNTSPLAKAVIGRKAGEVVEVEAPN 149

Query: 114 GVATHLEVLEL 124
                ++++ +
Sbjct: 150 --KYQVKIVHV 158


>UniRef50_UPI0001746370 transcript cleavage factor/unknown domain fusion protein n=1
           Tax=Verrucomicrobium spinosum DSM 4136
           RepID=UPI0001746370
          Length = 627

 Score = 87.9 bits (217), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 21/100 (21%), Positives = 43/100 (43%), Gaps = 3/100 (3%)

Query: 35  NAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPV 94
             EL RA+      +  + V + + V  +++  G+   +T++         + LS ++ +
Sbjct: 524 ERELRRARGTDFVGVSTETVGIGTIVDLQDVGTGKTETQTILGAWDGDPDQSILSYLSEM 583

Query: 95  GAALLGLRVGDSIHWELPGGVATHLEVLELEY---QPEAA 131
             AL+G RVGD             ++++ +     Q EAA
Sbjct: 584 AKALIGKRVGDEAELPTDTHGTRKVKIVSIRPYRTQAEAA 623


>UniRef50_C4ZAT8 Transcription elongation factor GreA n=21 Tax=Firmicutes
           RepID=C4ZAT8_EUBR3
          Length = 167

 Score = 87.9 bits (217), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 42/106 (39%), Gaps = 1/106 (0%)

Query: 20  LEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPA 79
            +Q           L   +  A +   +E   D V M + V      D E     +V   
Sbjct: 50  AKQFKNQNESRIRYLEKMIKTAVVI-SDESKDDEVGMFNTVDVYFEDDDETETYKIVTTV 108

Query: 80  KMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
           +       +S  +P+GAA+ G +VGD    ++    +  +++++++
Sbjct: 109 RGNSLKNLISKESPLGAAIFGHKVGDRCEVKVNDDYSYFVKIMKIQ 154


>UniRef50_A7VBG3 Putative uncharacterized protein n=1 Tax=Clostridium sp. L2-50
           RepID=A7VBG3_9CLOT
          Length = 195

 Score = 87.5 bits (216), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 25/105 (23%), Positives = 45/105 (42%), Gaps = 1/105 (0%)

Query: 20  LEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPA 79
            ++   A       L+  +  A++   E    D V +N+ V+     D E     +V   
Sbjct: 80  AKKDKNANEKRIRYLDRMVRTAEIIKDESAD-DEVGLNNTVRVYFEEDEEEDTYRIVTTV 138

Query: 80  KMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
           +    N  +S ++P+G ALLG +VGD +      G   H+ + E+
Sbjct: 139 REDVLNGIISNISPMGKALLGHKVGDRVEVVPGKGDPFHIVIREI 183


>UniRef50_A4E9C2 Transcription elongation factor n=1 Tax=Collinsella aerofaciens
           ATCC 25986 RepID=A4E9C2_9ACTN
          Length = 156

 Score = 87.5 bits (216), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 45/118 (38%), Gaps = 9/118 (7%)

Query: 9   NDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDG 68
           ++ DA +                  + A L  AQ+          V++ S V   +  +G
Sbjct: 48  SEYDAAK------DKQAQNAARIAEIQAILANAQV--AATTGDLTVSIGSTVSLID-PNG 98

Query: 69  EVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
           EV   TLV   +      ++S  +PVG A++G   GDS+    P G      + ++  
Sbjct: 99  EVMEVTLVGTTETNSLEHKISNESPVGHAIIGHGEGDSVEVVTPSGKTRVYTIAKIAR 156


>UniRef50_A6SZ83 Transcription elongation factor, greA family n=2
           Tax=Oxalobacteraceae RepID=A6SZ83_JANMA
          Length = 139

 Score = 87.5 bits (216), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 48/121 (39%), Gaps = 3/121 (2%)

Query: 7   IINDLDAERIDILLEQPAYAGL---PIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFR 63
            +   DA  +  + E     G       + L   +  + +   +      VT+ S V + 
Sbjct: 6   YLTQNDAATLSRIAEHLLRMGEVEINAGEQLIDIISTSIILPVDVQRKGYVTLYSTVSYS 65

Query: 64  NLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLE 123
            +   EVR  T+V P         +S + P+G AL+G +   ++   LP      L++L+
Sbjct: 66  PVDTEEVRKLTIVCPQDANPQLALISALTPIGLALIGRKALTTVEVALPSKRVEKLKILD 125

Query: 124 L 124
           +
Sbjct: 126 V 126


>UniRef50_P47524 Transcription elongation factor greA n=4 Tax=Mycoplasma
           RepID=GREA_MYCGE
          Length = 161

 Score = 87.5 bits (216), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 50/135 (37%), Gaps = 11/135 (8%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHD 52
           + RP II    +A     L E   Y                +   L  A++ S  +    
Sbjct: 26  VKRPEIIRLLQEARDQGDLSENADYDAAKAQQGEIETRIAEIQDILANAKLISDHQAKTK 85

Query: 53  V--VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWE 110
           V  V++ S V+  + S       T+V   +      ++S  +P+  A+ G  +GD     
Sbjct: 86  VTKVSLGSTVEIYDYSSKSNEKYTIVGTLEANPEEHKISNESPLALAIYGRLIGDECDV- 144

Query: 111 LPGGVATHLEVLELE 125
           +   V   +++L++ 
Sbjct: 145 VGIEVPYRVKILKIS 159


>UniRef50_Q2G8D8 GreA/GreB family elongation factor n=4 Tax=cellular organisms
           RepID=Q2G8D8_NOVAD
          Length = 182

 Score = 87.5 bits (216), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 33/138 (23%), Positives = 48/138 (34%), Gaps = 12/138 (8%)

Query: 2   SRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEM-PHD 52
            RP I+     A       E   Y                L   +  +++  P       
Sbjct: 48  ERPAIVEIVSWAAGNGDRSENGDYLYGRKRMREIDRELAFLARRMKASRVVDPARQEDRS 107

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V   + V+  +  D   +V TLV   +   S   +   AP+  AL G RVGD     LP
Sbjct: 108 RVLFGATVEIADEDDNR-KVLTLVGDDEQDASKGLIGWSAPIAKALRGSRVGDLRIVRLP 166

Query: 113 GGVATHLEVLELEYQPEA 130
            G     E++ + Y PEA
Sbjct: 167 SG-QKEWEIMAISY-PEA 182


>UniRef50_B1ZZX3 GreA/GreB family elongation factor n=3 Tax=Verrucomicrobia
           RepID=B1ZZX3_OPITP
          Length = 616

 Score = 87.1 bits (215), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 45/109 (41%), Gaps = 1/109 (0%)

Query: 18  ILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVY 77
            + +Q     +     L  +L RA++   ++   D V++ + V+  ++ DG     T++ 
Sbjct: 503 KMAKQEQQVLMAHKTNLERDLGRARISDFKDASIDQVSVGTVVEVASVKDGHHTTYTVLG 562

Query: 78  PAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
                     +S   P GAALLG + GD I+ +          ++ +  
Sbjct: 563 AWDGDPEKHFISYKTPFGAALLGKKTGDVINVKT-DASDEDYAIVSIAR 610


>UniRef50_C4L6P4 GreA/GreB family elongation factor n=1 Tax=Exiguobacterium sp. AT1b
           RepID=C4L6P4_EXISA
          Length = 152

 Score = 86.7 bits (214), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 30/106 (28%), Positives = 46/106 (43%), Gaps = 3/106 (2%)

Query: 20  LEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPA 79
             +           LN  LD A +     +  +VVT  +RV  R +   E     +V  A
Sbjct: 49  AVRQYERIEADILELNHLLDDATIVES--VQSEVVTFGNRVVIREVQQEETERYRIVSEA 106

Query: 80  KMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
           +       +SV +P+G  L+G  +G +I  E PGG    +EVL +E
Sbjct: 107 EADLERGSISVTSPLGRRLMGATMGQTIQVETPGGTIQ-VEVLHIE 151


>UniRef50_D1R523 Putative uncharacterized protein n=1 Tax=Parachlamydia
           acanthamoebae str. Hall's coccus RepID=D1R523_9CHLA
          Length = 731

 Score = 86.7 bits (214), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 49/120 (40%), Gaps = 10/120 (8%)

Query: 10  DLDAER-IDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           +++A R +  L E   Y                L+ +L+RA++ + +++  + V++ S V
Sbjct: 608 EIEAARSLGDLRENSEYKFALEKRSRLQGELKRLSEQLNRARIITKDDIYLNQVSVGSIV 667

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
           +  +     V   T++ P         LS  +    A+LG +VG+   +         ++
Sbjct: 668 ELEDPEKN-VVTYTILGPWDADADTNILSFQSKFAEAMLGRKVGEEFEFRNQNFTIRTIK 726


>UniRef50_C6B1R3 GreA/GreB family elongation factor n=16 Tax=cellular organisms
           RepID=C6B1R3_RHILS
          Length = 160

 Score = 86.7 bits (214), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 32/119 (26%), Positives = 47/119 (39%), Gaps = 10/119 (8%)

Query: 10  DLDAER-IDILLEQPAYAGLP--IADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLS 66
             DA   I+ + E+   A  P      L A L  AQ+  P     D V   S V FR   
Sbjct: 49  AYDAASPIEDVNERRRQAASPLRDLRYLTARLRTAQLM-PSPTSIDTVAFGSTVTFR-RD 106

Query: 67  DGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
           DG V+   +V   +       +S ++PV   L+G  VGD +           LE++ + 
Sbjct: 107 DGRVQTYRIVGEDEADPKAGSISYVSPVARLLMGKAVGDMVE-----TGGQELEIIAIA 160


>UniRef50_B1ZQE9 GreA/GreB family elongation factor n=1 Tax=Opitutus terrae PB90-1
           RepID=B1ZQE9_OPITP
          Length = 166

 Score = 86.7 bits (214), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 25/98 (25%), Positives = 40/98 (40%), Gaps = 2/98 (2%)

Query: 28  LPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQ 87
              A  L   L  A++ S       +V   ++V  +   DG      +V   +       
Sbjct: 71  DERARELQQILATAEIISSPAPDRSIVRFGAKVTVK-EEDGTTSTYRIVGIDETEFYTGG 129

Query: 88  LSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
           +S  +P+  ALLG  VGD I ++ P G    LE+  +E
Sbjct: 130 ISFQSPLAQALLGASVGDRIQFQSPAG-PRQLEIQLIE 166


>UniRef50_B1I1G7 GreA/GreB family elongation factor n=1 Tax=Candidatus Desulforudis
           audaxviator MP104C RepID=B1I1G7_DESAP
          Length = 154

 Score = 86.4 bits (213), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 20/100 (20%), Positives = 42/100 (42%), Gaps = 1/100 (1%)

Query: 28  LPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQ 87
               + +   L RA++   +  P  +  +   ++  +L  G   +  +V P ++  +   
Sbjct: 54  DDYLNRVRELLARARVVEGQCPPLPLTLIGCDIRVEDLDRGHSEMFRVVSPYEINPAAGH 113

Query: 88  LSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQ 127
           +S ++PVG  LL    G  +  + PGG      V+ + Y 
Sbjct: 114 VSFLSPVGRGLLLKEPGQVLAVQAPGGTFR-YRVVSVTYP 152


>UniRef50_B9XT30 GreA/GreB family elongation factor n=1 Tax=bacterium Ellin514
           RepID=B9XT30_9BACT
          Length = 606

 Score = 86.4 bits (213), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 43/105 (40%), Gaps = 1/105 (0%)

Query: 20  LEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPA 79
            ++     +     L +EL RA+         D V++ + VK  +L+   +    ++   
Sbjct: 497 AKEMQKILMRRKAELESELVRARGTDYLNPKTDAVSIGTIVKVTDLNSSHIEHFNILGAW 556

Query: 80  KMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
                   +S +AP+  +LL  + G+ + +E+  G      + E+
Sbjct: 557 DSDPEKNVISYLAPLAQSLLNRKPGEEVDYEM-DGQKRRFRIDEI 600


>UniRef50_UPI00017427C8 transcription elongation factor GreA n=1 Tax=candidate division TM7
           single-cell isolate TM7a RepID=UPI00017427C8
          Length = 151

 Score = 86.4 bits (213), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 26/132 (19%), Positives = 49/132 (37%), Gaps = 13/132 (9%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHDV 53
            R  I     +A     L E   Y                +   L  A + +        
Sbjct: 25  RRGEIAEKIAEARDYGDLSENAEYDAAREEQGIVETRIAEIENILQNAAIITGGV--SGQ 82

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           V + S V+   ++  +  V T+V P +      ++S  +P+GAAL+G +V D +    P 
Sbjct: 83  VGLGSVVEL--MTGSKTAVYTVVGPVEADPLEGKVSNESPIGAALMGKKVDDIVEINTPK 140

Query: 114 GVATHLEVLELE 125
           G     +++ ++
Sbjct: 141 G-KLEYKIISIK 151


>UniRef50_B9KMW2 Transcription elongation factor n=3 Tax=Rhodobacter sphaeroides
           RepID=B9KMW2_RHOSK
          Length = 164

 Score = 86.0 bits (212), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 27/114 (23%), Positives = 43/114 (37%), Gaps = 2/114 (1%)

Query: 14  ERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVR 73
            R D L   P  A       L A +  A +  P   P D V     V   +   G   V 
Sbjct: 52  AREDRLDRLPEAAAERDIRYLEARIASAILVDPAAQPLDEVAFGLAVTVED-EAGRRTVW 110

Query: 74  TLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQ 127
            +    +   +  +++  AP+  AL+G R+G+ + W  P G    L V  + + 
Sbjct: 111 EITGEDEAQATARRIAPQAPLARALMGARLGEKVVWTRPAGE-VTLTVTGIAHP 163


>UniRef50_D0KZQ0 Transcription elongation factor GreB n=1 Tax=Halothiobacillus
           neapolitanus c2 RepID=D0KZQ0_HALNC
          Length = 175

 Score = 86.0 bits (212), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 25/141 (17%), Positives = 49/141 (34%), Gaps = 13/141 (9%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMPHD 52
           + R  ++    +A  +    E   Y                L   L   ++        +
Sbjct: 24  VERRLVVQAVSEAAALGDRSENAEYIYGKRRLREIDRRIRYLQKRLGDIKVVRQPPTDMN 83

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V   +R+      D   +   LV P ++  +N  +S+ +P+  A+LG  +   +   LP
Sbjct: 84  KVYFGARITLLYADD-REQTVCLVGPDEIDPANQLISIDSPLAKAVLGKALDAEVVLFLP 142

Query: 113 GG----VATHLEVLELEYQPE 129
                    H E++ +EY  E
Sbjct: 143 SETSTPRRVHAEIIAIEYPSE 163


>UniRef50_A6X2G5 GreA/GreB family elongation factor n=2 Tax=Ochrobactrum
           RepID=A6X2G5_OCHA4
          Length = 156

 Score = 86.0 bits (212), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 52/125 (41%), Gaps = 9/125 (7%)

Query: 6   IIINDLDAERIDI-LLEQPAYAGLPIADALNAEL-------DRAQMCSPEEMPHDVVTMN 57
           + + + +  R+   L +            ++ +L       + A++  P     DVV   
Sbjct: 33  LTMIEDEIARLQRELADANVAGERSAIARISRDLRYWTTRRENAELSVP-VPDSDVVRFG 91

Query: 58  SRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVAT 117
             V+  NL DG+VR  T+V   +   SN ++S +APV   L G  VGD +          
Sbjct: 92  MTVELENLDDGKVRRWTIVGEDEADPSNGKISHVAPVAILLFGKPVGDVVKINNVEWEIV 151

Query: 118 HLEVL 122
            L+++
Sbjct: 152 SLKIV 156


>UniRef50_B9J7D6 Transcription elongation factor protein n=52
           Tax=Alphaproteobacteria RepID=B9J7D6_AGRRK
          Length = 160

 Score = 85.6 bits (211), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 25/105 (23%), Positives = 39/105 (37%), Gaps = 7/105 (6%)

Query: 21  EQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAK 80
            + A   L     L   +  AQ   P     D+V   S V F +  DG V+   +V   +
Sbjct: 63  RRQAAGPLRDLRYLAERIRTAQPI-PAPASIDIVAFGSTVTF-SRDDGRVQTYRIVGEDE 120

Query: 81  MTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
                  +S ++PV   L+G  VGD             LE++ + 
Sbjct: 121 ADPKTGSISFVSPVAKLLMGKSVGDVASV-----GDQELEIIAIA 160


>UniRef50_Q5SJG6 Anti-cleavage anti-GreA transcription factor Gfh1 n=6
           Tax=Thermaceae RepID=Q5SJG6_THET8
          Length = 156

 Score = 85.2 bits (210), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 31/118 (26%), Positives = 52/118 (44%), Gaps = 6/118 (5%)

Query: 10  DLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGE 69
           D D   ++   +Q         D+L   L RA +        +V+ + S V+  +   GE
Sbjct: 42  DYDDSGLEA-AKQEKARIEARIDSLEDILSRAVILEEG--SGEVIGLGSVVELEDPLSGE 98

Query: 70  VRVRTLVYPAKMTDSNT--QLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
                +V PA+    +T  ++S  +P+G ALLG RVGD +  + P G      V+ + 
Sbjct: 99  RLSVQVVSPAEANVLDTPMKISDASPMGKALLGHRVGDVLSLDTPKGR-REFRVVAIH 155


>UniRef50_Q2SSM5 Transcription elongation factor greA n=6 Tax=Mollicutes
           RepID=GREA_MYCCT
          Length = 157

 Score = 85.2 bits (210), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 22/134 (16%), Positives = 54/134 (40%), Gaps = 10/134 (7%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEM-PH 51
           ++RP +I   ++A     L E   Y                +   ++RA++    +    
Sbjct: 25  VTRPKVIEELVEARNQGDLSENADYDAARNRQAEVEARIKEVETLINRAKVIDNSKTHST 84

Query: 52  DVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWEL 111
             V + S V+F +  D + +   +V   +    +  +S  +P+  A+LG ++GD++  + 
Sbjct: 85  GEVKIGSTVEFLSSLDHKTKEIKIVGAIEADPFSRLISNESPIAKAILGKKIGDTVEIKD 144

Query: 112 PGGVATHLEVLELE 125
                  + +  ++
Sbjct: 145 IL-KPYKITIKSIK 157


>UniRef50_A5D4X0 Putative uncharacterized protein n=1 Tax=Pelotomaculum
           thermopropionicum SI RepID=A5D4X0_PELTS
          Length = 150

 Score = 84.4 bits (208), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 26/98 (26%), Positives = 44/98 (44%), Gaps = 1/98 (1%)

Query: 28  LPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQ 87
                 L+  +  A      +     VT+ S V+ +NLS+ EV    +V P         
Sbjct: 48  ENYIQRLDRLIRNASKSKIADNKVPFVTIGSEVEIQNLSEQEVYKYFIVNPFYSEVREGH 107

Query: 88  LSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
           +S ++PVG +LL  +VGD +  + PGGV    ++  + 
Sbjct: 108 ISFLSPVGKSLLLKKVGDEVEVKAPGGVFR-YKIKSIR 144


>UniRef50_A9NGN4 Transcription elongation factor greA n=7 Tax=Acholeplasmataceae
           RepID=GREA_ACHLI
          Length = 158

 Score = 84.0 bits (207), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 18/117 (15%), Positives = 43/117 (36%), Gaps = 7/117 (5%)

Query: 9   NDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDG 68
            D DA R +                + + L   ++    +     V +  +V    +   
Sbjct: 49  ADYDAARNEQ------ARIEARILEIESILKNVKIIRTND-DSTTVNIGKKVLLHFVEKN 101

Query: 69  EVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
           +     +V   +    N ++S+ +P+G A+ G  VGD +  +      +++E+  + 
Sbjct: 102 KDVEYHVVGTIEADPKNFKISIESPLGRAIKGKEVGDLVQIKSATNKQSNVEIKAIS 158


>UniRef50_Q88Q22 Transcription elongation factor, putative n=11 Tax=Pseudomonas
           RepID=Q88Q22_PSEPK
          Length = 165

 Score = 83.7 bits (206), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 3/103 (2%)

Query: 22  QPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKM 81
           Q            +A +  AQ+  P    H  V + SRV+F +  D + +V  LV   + 
Sbjct: 62  QRLADTERDLRYFSARVQSAQVV-PAATSHSKVQIGSRVRFVDAQD-QEQVVQLVGEDEA 119

Query: 82  TDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
              +  ++  +P+G ALLG   GD + W  P G    +EV+E+
Sbjct: 120 DAGHGLINWGSPLGRALLGAGPGDEVVWRRPVGEQV-IEVVEI 161


>UniRef50_Q6MF39 Putative uncharacterized protein n=1 Tax=Candidatus Protochlamydia
           amoebophila UWE25 RepID=Q6MF39_PARUW
          Length = 723

 Score = 83.7 bits (206), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 24/125 (19%), Positives = 52/125 (41%), Gaps = 15/125 (12%)

Query: 10  DLDAER-IDILLEQPAYAGLPIAD-ALNAELD-------RAQMCSPEEMPHDVVTMNSRV 60
           +++A R +  L E   +         L +EL        RA++ +P+++  D V + S +
Sbjct: 600 EIEAARALGDLRENSEFKFAQERRARLQSELKTLSEQFGRARIITPDDILTDEVGIGSVI 659

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
              +   G+    +++ P         LS+ +    A++G ++GD   ++         +
Sbjct: 660 DLIDSQ-GQKIRYSILGPWDADPEKNILSLNSKFAQAMIGKKIGDQFQFK-----DETFK 713

Query: 121 VLELE 125
           VL L 
Sbjct: 714 VLSLH 718


>UniRef50_B4D3Z7 GreA/GreB family elongation factor n=1 Tax=Chthoniobacter flavus
           Ellin428 RepID=B4D3Z7_9BACT
          Length = 609

 Score = 83.3 bits (205), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 15/106 (14%), Positives = 37/106 (34%), Gaps = 1/106 (0%)

Query: 20  LEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPA 79
            ++              +L +A+           V++ + V  +   DG   V T++   
Sbjct: 501 AKEMQRVLSRRRAETERDLAQARGTDFANPDTAQVSVGTIVTLKETGDGRTDVYTILGAW 560

Query: 80  KMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
                   +S  + +  AL+G + G+ ++     G      + ++E
Sbjct: 561 DGDPDKGIVSYQSALAQALIGHKPGEQVNVPTEHG-DRTARIEKIE 605


>UniRef50_Q9Z7G4 Transcription elongation factor greA n=13 Tax=Chlamydiaceae
           RepID=GREA_CHLPN
          Length = 722

 Score = 82.9 bits (204), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 22/122 (18%), Positives = 49/122 (40%), Gaps = 14/122 (11%)

Query: 12  DAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFR 63
           DA  +  L E   Y                L+ E++RA++ + + +  D V +  +V  +
Sbjct: 599 DARSLGDLRENSEYKFALEKRARLQEEIRVLSEEINRARILTKDLVFTDKVGVGCKVTLK 658

Query: 64  NLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLE 123
               GEV   T++ P      +  LS+ + +   +LG ++ D +  +         ++  
Sbjct: 659 -GDAGEVVEYTILGPWDADPDSCILSLQSKLAQNMLGKKLNDVVILQG-----KEYKISR 712

Query: 124 LE 125
           ++
Sbjct: 713 IQ 714


>UniRef50_B2UNZ9 GreA/GreB family elongation factor n=1 Tax=Akkermansia muciniphila
           ATCC BAA-835 RepID=B2UNZ9_AKKM8
          Length = 615

 Score = 82.5 bits (203), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 39/128 (30%), Gaps = 3/128 (2%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAG--LPIADALNAELDRAQMCSPEEMPHDVVTMNS 58
           +    I   + D        +              L   L  A+             M +
Sbjct: 485 LHNKKISRAEGDLRENGGYQDAKEVEKVLNRRRAELEHALALARGTDFAVTDTSRAAMGT 544

Query: 59  RVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATH 118
           +V  + L+ GE  V T++           +S ++ VG  L G  VGD +      G    
Sbjct: 545 KVTLQPLNGGEPVVYTILGAWDTNPEKHIVSYLSQVGKELTGKSVGDQVKIVPMDGDKKK 604

Query: 119 -LEVLELE 125
              + ++E
Sbjct: 605 VYTITKIE 612


>UniRef50_UPI0001C31C12 transcription elongation factor GreA n=1 Tax=Conexibacter woesei
           DSM 14684 RepID=UPI0001C31C12
          Length = 154

 Score = 81.3 bits (200), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 49/132 (37%), Gaps = 12/132 (9%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIAD--------ALNAELDRAQMCSPEEMPHD 52
           ++R  I      A     L E   Y                L      A +        D
Sbjct: 25  VARREIAARIRTAREWGDLKENAEYHAAKEDQAHLETRILKLRERERNATVTEASS-DVD 83

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
           +V   S V+    + G+    TLV  A+ +  + +LS+ +PV  AL+G R G+ +  + P
Sbjct: 84  IVAFGSTVEVE--TGGKNARYTLVGAAEASARDGKLSIESPVARALIGARAGEDVQVQTP 141

Query: 113 GGVATHLEVLEL 124
            G    L V+ +
Sbjct: 142 SGA-RILRVVRV 152


>UniRef50_C6XVH8 Transcription elongation factor n=1 Tax=Pedobacter heparinus DSM
           2366 RepID=C6XVH8_PEDHD
          Length = 125

 Score = 81.0 bits (199), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 34/122 (27%), Positives = 63/122 (51%), Gaps = 2/122 (1%)

Query: 5   TIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRN 64
           +II++    + +   + +   +     + L  EL  A+    +++P DVVT+N+RV+ + 
Sbjct: 4   SIILSTGIFDLLKDHIRRRKLSKYN-QEKLEQELRNARQILSKDIPADVVTVNTRVRVKE 62

Query: 65  LSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
           L  G     TLV PAK  + +  LS+++P+G A++G   G  + WE+P G      + E+
Sbjct: 63  LETGAEFNYTLVPPAKARNKHNTLSILSPIGVAMVGYSQGSELKWEMPEG-IKAYRIEEV 121

Query: 125 EY 126
             
Sbjct: 122 TR 123


>UniRef50_UPI0001746B72 nucleoside diphosphate kinase regulator protein, putative n=1
           Tax=Verrucomicrobium spinosum DSM 4136
           RepID=UPI0001746B72
          Length = 137

 Score = 80.6 bits (198), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 51/126 (40%), Gaps = 7/126 (5%)

Query: 8   INDLDAERIDILLEQPAYAGLPIADA---LNAELDRAQMC-SPEEMPHDVVTMNSRVKFR 63
           I+  D   +   L+         A     L   L  A++     +    V  + + V+  
Sbjct: 9   ISQSDLHTLRTFLDHDDAFNPLDARERSLLIERLQDAKVFEDESDDEPSVAGLQTLVRVE 68

Query: 64  NLSD--GEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           +LS    +    TLV P +    + Q+S+++P+GAA+ G   G  +  + P G    L V
Sbjct: 69  DLSTSPPDQFDFTLVLPHEANFEDDQISILSPLGAAVFGRSAGTQVVMDSPTGTRRLL-V 127

Query: 122 LELEYQ 127
           L +  +
Sbjct: 128 LAVFRK 133


>UniRef50_B4RDE4 Transcription elongation factor GreA/GreB, family n=1
           Tax=Phenylobacterium zucineum HLK1 RepID=B4RDE4_PHEZH
          Length = 161

 Score = 80.6 bits (198), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/118 (24%), Positives = 44/118 (37%), Gaps = 3/118 (2%)

Query: 8   INDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSD 67
           + DLD        E              A    AQ+        D V   +RV FR    
Sbjct: 41  LADLDQRIAGCEDEAQMAWLRRDQRYWAARRANAQVVE-SPADPDEVAFGTRVTFR-KDG 98

Query: 68  GEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
           G      LV   +   +  +LS +AP+  A++G   G+++  E     A  LE+L +E
Sbjct: 99  GAPETVELVGEDEAEPAQGRLSWVAPLARAMIGAMPGETVELETRT-PAIRLEILAVE 155


>UniRef50_B6BTF1 GreA/GreB family elongation factor n=2 Tax=Betaproteobacteria
           RepID=B6BTF1_9PROT
          Length = 164

 Score = 79.8 bits (196), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 46/129 (35%), Gaps = 8/129 (6%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAG-----LPIADALNAELDRAQMCSPEEMPHDVVTMN 57
           + TI + + + + I  L + P                    + A +    E  ++ V   
Sbjct: 39  KETIHLIETEIKSIKELEDSPENKQNKMKLERDLRYYLKRFETAILIDKHE-ENNKVLFG 97

Query: 58  SRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVAT 117
           + V   +  + E     +V   +      +LS ++P+   L+G  +GD + W+   G   
Sbjct: 98  AHVILID-ENDEAYKFQIVGEDEADIKQNKLSYVSPLAKELIGSLIGDEVVWKRADGNRV 156

Query: 118 HLEVLELEY 126
              +  + Y
Sbjct: 157 VF-IDSINY 164


  Database: uniref50.fasta
    Posted date:  Mar 8, 2010 10:38 AM
  Number of letters in database: 1,040,396,356
  Number of sequences in database:  3,077,464
  
Lambda     K      H
   0.314    0.165    0.482 

Lambda     K      H
   0.267   0.0504    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,021,793,927
Number of Sequences: 3077464
Number of extensions: 47186169
Number of successful extensions: 139803
Number of sequences better than 1.0e-01: 250
Number of HSP's better than  0.1 without gapping: 708
Number of HSP's successfully gapped in prelim test: 102
Number of HSP's that attempted gapping in prelim test: 138649
Number of HSP's gapped (non-prelim): 829
length of query: 136
length of database: 1,040,396,356
effective HSP length: 101
effective length of query: 35
effective length of database: 729,572,492
effective search space: 25535037220
effective search space used: 25535037220
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.2 bits)
S2: 88 (38.2 bits)
