Phyre 2 alignment of P0AFW4 with d2d7na1

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Job Description | P0AFW4
Confidence | 30.51% | Date | Thu Jan 5 11:27:26 GMT 2012
Rank | 44 | Aligned Residues | 31
% Identity | 16% | Template | d2d7na1
SCOP info | Immunoglobulin-like beta-sandwich | E set domains | Filamin repeat (rod domain)
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 106 | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | S | I | H | W | E | L | P | G | G | V | A | T | H | L | E | V | . | . | . | . | . | . | . | L | E | L | E | Y | Q | P | E | A | A | G | D | Y | L | L
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | T | G | E | V | R | M | P | S | G | K | T | A | R | P | N | I | T | D | N | K | D | G | T | I | T | V | R | Y | A | P | T | E | K | G | L | H | Q | M
Template Known Secondary structure |  |  |  |  |  |  |  | T | T | S |  |  |  |  |  |  |  |  |  |  | S | S | S |  |  |  |  |  |  |  |  | S | S |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 25 | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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