BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= batch____
         (136 letters)

Database: uniref50.fasta 
           3,077,464 sequences; 1,040,396,356 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q2LTP9 Transcription elongation factor n=2 Tax=Deltapro...   167   8e-41
UniRef50_C5S652 GreA/GreB family elongation factor n=2 Tax=Prote...   166   2e-40
UniRef50_P0AFW6 Regulator of nucleoside diphosphate kinase n=155...   160   1e-38
UniRef50_Q3BX42 Regulator of nucleoside diphosphate kinase n=9 T...   158   4e-38
UniRef50_A6VVR5 GreA/GreB family elongation factor n=15 Tax=Prot...   158   8e-38
UniRef50_B5EI69 GreA/GreB family elongation factor n=6 Tax=Desul...   154   5e-37
UniRef50_A0LL17 GreA/GreB family elongation factor n=3 Tax=Bacte...   153   2e-36
UniRef50_B8GS58 GreA/GreB family elongation factor n=22 Tax=Prot...   153   2e-36
UniRef50_Q6MQZ8 Regulator of nucleoside diphosphate kinase n=1 T...   153   2e-36
UniRef50_Q1H3Z9 GreA/GreB family elongation factor n=1 Tax=Methy...   146   2e-34
UniRef50_Q11P04 Transcription elongation factor n=1 Tax=Cytophag...   145   4e-34
UniRef50_C6RP41 GreA/GreB family elongation factor n=4 Tax=Acine...   143   2e-33
UniRef50_B0SEQ9 Transcription elongation factor n=2 Tax=Leptospi...   141   8e-33
UniRef50_A4XNX9 GreA/GreB family elongation factor n=16 Tax=Bact...   140   1e-32
UniRef50_Q7MD62 Transcription elongation factor n=10 Tax=Proteob...   140   1e-32
UniRef50_B9MBQ3 GreA/GreB family elongation factor n=6 Tax=Betap...   140   2e-32
UniRef50_B9NGJ6 Predicted protein n=12 Tax=cellular organisms Re...   139   2e-32
UniRef50_A9GAI2 Regulator of nucleoside diphosphate kinase n=1 T...   139   3e-32
UniRef50_B5JTX6 Transcription elongation factor n=1 Tax=gamma pr...   138   4e-32
UniRef50_Q13WN5 GreA/GreB family elongation factor n=50 Tax=Burk...   137   9e-32
UniRef50_B8G0E1 GreA/GreB family elongation factor n=2 Tax=Desul...   137   9e-32
UniRef50_Q3K4S3 Regulator of nucleoside diphosphate kinase n=2 T...   134   7e-31
UniRef50_A9MBQ4 GreA/GreB family elongation factor n=36 Tax=Bruc...   134   8e-31
UniRef50_C9P6Y2 Regulator of nucleoside diphosphate kinase n=1 T...   133   2e-30
UniRef50_Q3SMM4 GreA/GreB family elongation factor n=1 Tax=Thiob...   133   2e-30
UniRef50_B2SQJ5 Regulator of nucleoside diphosphate kinase n=8 T...   133   2e-30
UniRef50_C6X5Q8 Transcription elongation factor n=1 Tax=Flavobac...   132   3e-30
UniRef50_Q4KB20 Acetyltransferase, GNAT family family n=9 Tax=Ba...   132   3e-30
UniRef50_A6C278 Nucleoside diphosphate kinase regulator protein,...   132   3e-30
UniRef50_Q74EX3 Nucleoside diphosphate kinase regulator protein,...   132   3e-30
UniRef50_A6X582 GreA/GreB family elongation factor n=3 Tax=Rhizo...   132   4e-30
UniRef50_C0N448 Putative uncharacterized protein n=1 Tax=Methylo...   131   6e-30
UniRef50_C3X2V3 GreA/GreB family elongation factor n=2 Tax=Oxalo...   131   6e-30
UniRef50_A5F052 Regulator of nucleoside diphosphate kinase n=31 ...   130   1e-29
UniRef50_D1SYS0 GreA/GreB family elongation factor n=1 Tax=Acido...   129   3e-29
UniRef50_A6GQE5 Nucleoside diphosphate kinase regulator n=1 Tax=...   129   4e-29
UniRef50_B3PF63 Regulator of nucleoside diphosphate kinase n=1 T...   128   4e-29
UniRef50_A1TUC9 GreA/GreB family elongation factor n=4 Tax=Burkh...   127   1e-28
UniRef50_A5VGM9 GreA/GreB family elongation factor n=1 Tax=Sphin...   126   3e-28
UniRef50_C6VSR5 GreA/GreB family elongation factor n=2 Tax=Sphin...   125   4e-28
UniRef50_B8IFL5 GreA/GreB family elongation factor n=8 Tax=Methy...   124   1e-27
UniRef50_B9KH08 Transcription elongation factor n=9 Tax=Ricketts...   124   1e-27
UniRef50_Q3SU57 GreA/GreB family elongation factor n=9 Tax=Brady...   123   1e-27
UniRef50_A5V983 GreA/GreB family elongation factor n=1 Tax=Sphin...   123   2e-27
UniRef50_Q5P744 Transcription elongation factor n=3 Tax=Proteoba...   122   3e-27
UniRef50_P64276 Transcription elongation factor greA n=48 Tax=de...   120   1e-26
UniRef50_A8LN19 GreA/GreB family elongation factor n=8 Tax=Alpha...   120   1e-26
UniRef50_C6WYK0 GreA/GreB family elongation factor n=2 Tax=Methy...   120   1e-26
UniRef50_A9EFF1 GreA/GreB family elongation factor n=1 Tax=Ocean...   119   2e-26
UniRef50_A7IJH2 GreA/GreB family elongation factor n=4 Tax=Rhizo...   119   2e-26
UniRef50_B4RF21 Transcription elongation factor n=2 Tax=cellular...   119   2e-26
UniRef50_A8HR94 Transcription elongation factor greA n=5 Tax=Pro...   119   3e-26
UniRef50_Q0A765 Transcription elongation factor greA n=23 Tax=Pr...   119   4e-26
UniRef50_B0T7C4 GreA/GreB family elongation factor n=1 Tax=Caulo...   118   7e-26
UniRef50_Q98F06 Nucleoside diphosphate kinase regulator n=2 Tax=...   117   7e-26
UniRef50_A7HFE1 GreA/GreB family elongation factor n=1 Tax=Anaer...   117   9e-26
UniRef50_B3E3H5 Transcription elongation factor greA n=19 Tax=Pr...   117   1e-25
UniRef50_Q057J4 Transcription elongation factor greA n=20 Tax=Pr...   117   1e-25
UniRef50_Q1LSK1 Transcription elongation factor greA n=16 Tax=Pr...   117   1e-25
UniRef50_B2S6W5 Transcription elongation factor greA n=39 Tax=Ba...   116   2e-25
UniRef50_A1U1V6 GreA/GreB family elongation factor n=2 Tax=Marin...   116   2e-25
UniRef50_B7L307 GreA/GreB family elongation factor n=1 Tax=Methy...   116   2e-25
UniRef50_Q4HT85 Transcription elongation factor n=1 Tax=Campylob...   116   3e-25
UniRef50_Q7UVA0 Transcription elongation factor greA n=3 Tax=Pla...   116   3e-25
UniRef50_D2R891 Transcription elongation factor GreA n=1 Tax=Pir...   115   4e-25
UniRef50_Q1H282 GreA/GreB family elongation factor n=2 Tax=Prote...   115   5e-25
UniRef50_C6XWY5 Transcription elongation factor GreA/GreB domain...   114   1e-24
UniRef50_C0QKN0 Transcription elongation factor n=1 Tax=Desulfob...   114   1e-24
UniRef50_B0T793 GreA/GreB family elongation factor n=1 Tax=Caulo...   113   2e-24
UniRef50_Q7VM42 Transcription elongation factor greB n=27 Tax=Pr...   113   2e-24
UniRef50_A7HAZ2 GreA/GreB family elongation factor n=5 Tax=Myxoc...   113   2e-24
UniRef50_A6LPL4 Transcription elongation factor greA n=30 Tax=Cl...   113   2e-24
UniRef50_A4BB58 Nucleoside diphosphate kinase regulator n=1 Tax=...   112   2e-24
UniRef50_Q2GA51 GreA/GreB family elongation factor n=1 Tax=Novos...   112   3e-24
UniRef50_Q725M4 Transcription elongation factor greA n=4 Tax=Des...   112   4e-24
UniRef50_A8F083 Transcription elongation factor greA n=13 Tax=Ri...   111   5e-24
UniRef50_A3ESJ0 Transcription elongation factor n=4 Tax=Bacteria...   111   6e-24
UniRef50_Q04EK0 Transcription elongation factor greA n=4 Tax=Bac...   111   7e-24
UniRef50_C0A6F4 GreA/GreB family elongation factor n=1 Tax=Opitu...   111   8e-24
UniRef50_Q930S2 Putative uncharacterized protein n=1 Tax=Sinorhi...   111   8e-24
UniRef50_B1ZU20 GreA/GreB family elongation factor n=1 Tax=Opitu...   111   8e-24
UniRef50_Q0BZP7 Regulatory protein n=1 Tax=Hyphomonas neptunium ...   111   1e-23
UniRef50_Q8ZJH2 Transcription elongation factor greB n=165 Tax=P...   110   2e-23
UniRef50_D0J9T5 Transcription elongation factor n=55 Tax=Bacteri...   110   2e-23
UniRef50_B4UCU9 Transcription elongation factor greA n=588 Tax=B...   109   2e-23
UniRef50_Q97EB6 Transcription elongation factor greA n=6 Tax=Clo...   109   3e-23
UniRef50_Q15Z69 GreA/GreB family elongation factor n=1 Tax=Pseud...   109   3e-23
UniRef50_A5V3E1 Transcription elongation factor greA n=13 Tax=Pr...   109   3e-23
UniRef50_A4CMB9 Nucleoside diphosphate kinase regulator n=1 Tax=...   109   4e-23
UniRef50_D0LKY5 Transcription elongation factor n=1 Tax=Haliangi...   108   5e-23
UniRef50_UPI00016C498C transcription elongation factor greA n=1 ...   108   6e-23
UniRef50_C9RKD0 Transcription elongation factor n=1 Tax=Fibrobac...   108   6e-23
UniRef50_Q2GD99 Transcription elongation factor greA n=2 Tax=Neo...   108   7e-23
UniRef50_Q9HZY5 Transcription elongation factor greB n=13 Tax=Ga...   107   8e-23
UniRef50_A6EIL5 Nucleoside diphosphate kinase regulator protein,...   107   8e-23
UniRef50_C4XLU8 Transcription elongation factor greA n=11 Tax=De...   107   1e-22
UniRef50_A9WK05 Transcription elongation factor greA n=6 Tax=Chl...   107   1e-22
UniRef50_D1B0C0 Transcription elongation factor n=4 Tax=Campylob...   107   1e-22
UniRef50_Q5QX12 Transcription elongation factor family protein n...   107   1e-22
UniRef50_A5FRA2 Transcription elongation factor n=3 Tax=Dehaloco...   107   2e-22
UniRef50_Q88DU7 Transcription elongation factor greA n=83 Tax=Pr...   106   2e-22
UniRef50_B1MX52 Transcription elongation factor greA n=11 Tax=Fi...   106   2e-22
UniRef50_Q1H0G6 GreA/GreB family elongation factor n=3 Tax=Prote...   106   2e-22
UniRef50_D1B632 Transcription elongation factor n=4 Tax=Synergis...   106   2e-22
UniRef50_UPI0001C3129D transcription elongation factor GreA n=1 ...   106   2e-22
UniRef50_Q2LR03 Transcription elongation factor greA n=1 Tax=Syn...   106   2e-22
UniRef50_A7HDS3 Transcription elongation factor GreB n=3 Tax=Myx...   106   2e-22
UniRef50_A0AIU5 Transcription elongation factor greA n=99 Tax=Ba...   106   2e-22
UniRef50_A0LZA7 Transcription elongation factor n=1 Tax=Gramella...   105   4e-22
UniRef50_C7GYY1 Transcription elongation factor n=1 Tax=Eubacter...   105   4e-22
UniRef50_A5FHU8 GreA/GreB family elongation factor n=1 Tax=Flavo...   105   5e-22
UniRef50_C6WVB7 GreA/GreB family elongation factor n=2 Tax=Methy...   104   9e-22
UniRef50_A0LK20 Transcription elongation factor greA n=1 Tax=Syn...   104   1e-21
UniRef50_C9RNS9 GreA/GreB family elongation factor n=1 Tax=Fibro...   103   1e-21
UniRef50_A3PS97 GreA/GreB family elongation factor n=4 Tax=Rhodo...   103   2e-21
UniRef50_Q98F07 Nucleoside diphosphate kinase regulator; Rnk n=2...   103   2e-21
UniRef50_A7HXN2 GreA/GreB family elongation factor n=1 Tax=Parvi...   103   2e-21
UniRef50_Q096W9 Transcription elongation factor GreB n=1 Tax=Sti...   102   2e-21
UniRef50_B4W8F1 Putative uncharacterized protein n=1 Tax=Brevund...   102   3e-21
UniRef50_Q67JL1 Transcription elongation factor n=2 Tax=Clostrid...   102   3e-21
UniRef50_A8SDG2 Transcription elongation factor n=2 Tax=Clostrid...   102   5e-21
UniRef50_C9KJ19 Transcription elongation factor n=1 Tax=Mitsuoke...   102   5e-21
UniRef50_C7CFG6 Putative regulator n=1 Tax=Methylobacterium exto...   101   6e-21
UniRef50_C0QWD9 Transcription elongation factor n=2 Tax=Brachysp...   101   8e-21
UniRef50_Q817Z6 Transcription elongation factor greA n=141 Tax=c...   101   8e-21
UniRef50_Q1QUF3 GreA/GreB family elongation factor n=1 Tax=Chrom...   100   9e-21
UniRef50_Q2Z001 Transcription elongation factor n=1 Tax=uncultur...   100   1e-20
UniRef50_B4RBL2 Transcription elongation factor n=1 Tax=Phenylob...   100   1e-20
UniRef50_A6EMP4 Transcription elongation factor n=4 Tax=Bacteroi...   100   1e-20
UniRef50_B9XEY1 GreA/GreB family elongation factor n=1 Tax=bacte...   100   2e-20
UniRef50_A5CVW9 Transcription elongation factor greA n=4 Tax=Gam...   100   2e-20
UniRef50_C1XQ58 Transcription elongation factor n=2 Tax=Meiother...   100   2e-20
UniRef50_Q30T56 Transcription elongation factor n=3 Tax=Campylob...   100   2e-20
UniRef50_Q2Y7V5 GreA/GreB family elongation factor n=33 Tax=cell...   100   2e-20
UniRef50_Q0BR49 Transcription elongation factor greB n=4 Tax=cel...   100   2e-20
UniRef50_A6W1U9 Transcription elongation factor GreB n=17 Tax=Ga...   100   2e-20
UniRef50_Q03RN4 Transcription elongation factor n=1 Tax=Lactobac...   100   2e-20
UniRef50_B8IHN9 GreA/GreB family elongation factor n=1 Tax=Methy...   100   2e-20
UniRef50_Q3Z8E7 Transcription elongation factor greA n=2 Tax=Deh...    99   3e-20
UniRef50_Q3ATA7 Transcription elongation factor greA n=13 Tax=Ba...    99   3e-20
UniRef50_C1F9R4 Transcription elongation factor GreA n=1 Tax=Aci...    99   3e-20
UniRef50_C8S319 GreA/GreB family elongation factor n=1 Tax=Rhodo...    99   4e-20
UniRef50_A3HZU2 Transcription elongation factor GreB n=2 Tax=Bac...    99   5e-20
UniRef50_C4Z9L9 Transcription elongation factor n=3 Tax=Firmicut...    99   5e-20
UniRef50_Q98Q16 Transcription elongation factor greA n=3 Tax=Myc...    99   5e-20
UniRef50_C7PP41 Transcription elongation factor n=1 Tax=Chitinop...    98   6e-20
UniRef50_Q01RT9 GreA/GreB family elongation factor n=2 Tax=Acido...    98   6e-20
UniRef50_Q1AU03 Transcription elongation factor n=1 Tax=Rubrobac...    98   6e-20
UniRef50_D0J5N8 Kelongation factor GreB n=4 Tax=Proteobacteria R...    98   7e-20
UniRef50_Q1PYP5 Transcription elongation factor n=1 Tax=Candidat...    98   1e-19
UniRef50_C0JZV3 Transcription elongation factor GreA n=1 Tax=unc...    98   1e-19
UniRef50_D1PEW3 Transcription elongation factor n=1 Tax=Prevotel...    97   2e-19
UniRef50_UPI0001C37CEA transcription elongation factor GreA n=1 ...    97   2e-19
UniRef50_D2T9B8 Transcription elongation factor greB n=3 Tax=Erw...    96   3e-19
UniRef50_Q04HS9 Transcription elongation factor greA n=90 Tax=Ba...    96   3e-19
UniRef50_C6X3W9 Transcription elongation factor GreB n=1 Tax=Fla...    96   3e-19
UniRef50_C1ZBG3 Transcription elongation factor n=1 Tax=Planctom...    96   3e-19
UniRef50_Q8P7P8 Transcription elongation factor greB n=53 Tax=Pr...    96   4e-19
UniRef50_Q88KH5 Transcription elongation factor greB n=84 Tax=Ga...    96   4e-19
UniRef50_B2KBD2 GreA/GreB family elongation factor n=1 Tax=Elusi...    96   5e-19
UniRef50_Q1J0L4 Transcription elongation factor n=3 Tax=Deinococ...    95   5e-19
UniRef50_A5FHJ3 GreA/GreB family elongation factor n=3 Tax=Flavo...    95   5e-19
UniRef50_Q11G80 GreA/GreB family elongation factor n=1 Tax=Chela...    95   6e-19
UniRef50_A6H247 Transcription elongation factor greA n=33 Tax=Ba...    95   6e-19
UniRef50_Q1CX76 Transcription elongation factor, GreA/GreB famil...    95   7e-19
UniRef50_A6NPJ1 Putative uncharacterized protein n=1 Tax=Bactero...    95   7e-19
UniRef50_Q4A759 Transcription elongation factor greA n=4 Tax=Myc...    95   8e-19
UniRef50_Q5SKM1 Transcription elongation factor n=5 Tax=Thermus ...    95   8e-19
UniRef50_O51157 Transcription elongation factor greA n=23 Tax=Bo...    94   8e-19
UniRef50_B1ZD84 GreA/GreB family elongation factor n=4 Tax=Methy...    94   1e-18
UniRef50_Q12SN9 Transcription elongation factor GreB n=17 Tax=Ba...    94   1e-18
UniRef50_A5IYH4 Transcription elongation factor greA n=3 Tax=Myc...    94   1e-18
UniRef50_B1H062 Transcription elongation factor n=1 Tax=uncultur...    94   1e-18
UniRef50_D2RL35 GreA/GreB family elongation factor n=3 Tax=Veill...    94   1e-18
UniRef50_A0M1N1 GreA-like transcription elongation factor n=3 Ta...    94   2e-18
UniRef50_B9KZF4 Transcription elongation factor greA n=2 Tax=The...    93   2e-18
UniRef50_A5VME9 Transcription elongation factor GreA n=49 Tax=La...    93   2e-18
UniRef50_A2SJD8 Transcription elongation factor n=50 Tax=Proteob...    93   2e-18
UniRef50_C5BN87 Transcription elongation factor GreB n=5 Tax=Pro...    93   2e-18
UniRef50_Q2S2N3 Transcription elongation factor n=1 Tax=Saliniba...    93   3e-18
UniRef50_A2RGA4 Transcription elongation factor greA n=111 Tax=F...    93   3e-18
UniRef50_B1AIU2 Transcription elongation factor greA n=28 Tax=Ur...    93   3e-18
UniRef50_Q13CU9 Putative uncharacterized protein n=1 Tax=Rhodops...    93   3e-18
UniRef50_B5ZLJ0 Transcription elongation factor GreB n=5 Tax=Pro...    93   3e-18
UniRef50_Q9JVD0 Transcription elongation factor greB n=64 Tax=Ba...    93   4e-18
UniRef50_Q2N9J5 Transcription elongation factor n=2 Tax=Erythrob...    93   4e-18
UniRef50_C5BTE2 Transcription elongation factor GreA n=1 Tax=Ter...    93   4e-18
UniRef50_Q4K5S3 Transcription elongation factor GreB n=3 Tax=Pse...    92   6e-18
UniRef50_A9BFC0 Transcription elongation factor greA n=12 Tax=Th...    92   6e-18
UniRef50_B2S1W7 Transcription elongation factor greA n=6 Tax=Tre...    92   6e-18
UniRef50_B4UMG4 GreA/GreB family elongation factor n=4 Tax=Anaer...    91   7e-18
UniRef50_B4D5K0 GreA/GreB family elongation factor n=1 Tax=Chtho...    91   9e-18
UniRef50_B2V1C0 Transcription elongation factor n=28 Tax=Clostri...    91   9e-18
UniRef50_D2QK34 GreA/GreB family elongation factor n=1 Tax=Spiro...    91   9e-18
UniRef50_Q04UP0 Transcription elongation factor n=6 Tax=Leptospi...    91   1e-17
UniRef50_B5Y9H5 Transcription elongation factor n=1 Tax=Coprothe...    91   1e-17
UniRef50_C7T958 Transcription elongation factor n=4 Tax=Lactobac...    91   1e-17
UniRef50_A6NZ08 Transcription elongation factor n=1 Tax=Bacteroi...    91   1e-17
UniRef50_C8W826 Transcription elongation factor n=7 Tax=Coriobac...    91   1e-17
UniRef50_B7CAB2 Transcription elongation factor n=5 Tax=Erysipel...    91   1e-17
UniRef50_Q848L1 GreA n=1 Tax=uncultured bacterium RepID=Q848L1_9...    91   1e-17
UniRef50_B0VIH5 Putative transcription elongation factor n=1 Tax...    91   1e-17
UniRef50_A0LES5 GreA/GreB family elongation factor n=1 Tax=Syntr...    91   1e-17
UniRef50_Q0B0N4 Transcription elongation factor greA n=6 Tax=Clo...    91   1e-17
UniRef50_B0P8A6 Transcription elongation factor n=1 Tax=Anaerotr...    90   2e-17
UniRef50_B9L0L0 Transcription elongation factor greA n=1 Tax=The...    90   2e-17
UniRef50_B3DVF3 Transcription elongation factor GreA fused to un...    90   3e-17
UniRef50_D1C6T4 Transcription elongation factor n=1 Tax=Sphaerob...    89   3e-17
UniRef50_D1CDC6 Transcription elongation factor n=1 Tax=Thermoba...    89   3e-17
UniRef50_Q88ZS9 Transcription elongation factor greA 1 n=7 Tax=L...    89   3e-17
UniRef50_B1XUH7 Transcription elongation factor GreB n=2 Tax=Pol...    89   3e-17
UniRef50_D0WJ76 Transcription elongation factor n=1 Tax=Slackia ...    89   4e-17
UniRef50_B0N6V6 Transcription elongation factor n=4 Tax=Bacteria...    89   4e-17
UniRef50_A6STV7 Transcription elongation factor GreB n=2 Tax=Oxa...    89   4e-17
UniRef50_A7HXN3 GreA/GreB family elongation factor n=1 Tax=Parvi...    88   7e-17
UniRef50_C7N7T1 Transcription elongation factor n=1 Tax=Slackia ...    88   8e-17
UniRef50_B3PM73 Transcription elongation factor greA n=1 Tax=Myc...    88   9e-17
UniRef50_UPI0001746370 transcript cleavage factor/unknown domain...    88   9e-17
UniRef50_C4ZAT8 Transcription elongation factor GreA n=21 Tax=Fi...    88   9e-17
UniRef50_A7VBG3 Putative uncharacterized protein n=1 Tax=Clostri...    88   1e-16
UniRef50_A4E9C2 Transcription elongation factor n=1 Tax=Collinse...    88   1e-16
UniRef50_A6SZ83 Transcription elongation factor, greA family n=2...    88   1e-16
UniRef50_P47524 Transcription elongation factor greA n=4 Tax=Myc...    88   1e-16
UniRef50_Q2G8D8 GreA/GreB family elongation factor n=4 Tax=cellu...    88   1e-16
UniRef50_B1ZZX3 GreA/GreB family elongation factor n=3 Tax=Verru...    87   2e-16
UniRef50_C4L6P4 GreA/GreB family elongation factor n=1 Tax=Exigu...    87   2e-16
UniRef50_D1R523 Putative uncharacterized protein n=1 Tax=Parachl...    87   2e-16
UniRef50_C6B1R3 GreA/GreB family elongation factor n=16 Tax=cell...    87   2e-16
UniRef50_B1ZQE9 GreA/GreB family elongation factor n=1 Tax=Opitu...    87   2e-16
UniRef50_B1I1G7 GreA/GreB family elongation factor n=1 Tax=Candi...    86   2e-16
UniRef50_B9XT30 GreA/GreB family elongation factor n=1 Tax=bacte...    86   2e-16
UniRef50_UPI00017427C8 transcription elongation factor GreA n=1 ...    86   3e-16
UniRef50_B9KMW2 Transcription elongation factor n=3 Tax=Rhodobac...    86   3e-16
UniRef50_D0KZQ0 Transcription elongation factor GreB n=1 Tax=Hal...    86   3e-16
UniRef50_A6X2G5 GreA/GreB family elongation factor n=2 Tax=Ochro...    86   4e-16
UniRef50_B9J7D6 Transcription elongation factor protein n=52 Tax...    86   5e-16
UniRef50_Q5SJG6 Anti-cleavage anti-GreA transcription factor Gfh...    85   6e-16
UniRef50_Q2SSM5 Transcription elongation factor greA n=6 Tax=Mol...    85   6e-16
UniRef50_A5D4X0 Putative uncharacterized protein n=1 Tax=Pelotom...    84   1e-15
UniRef50_A9NGN4 Transcription elongation factor greA n=7 Tax=Ach...    84   1e-15
UniRef50_Q88Q22 Transcription elongation factor, putative n=11 T...    84   2e-15
UniRef50_Q6MF39 Putative uncharacterized protein n=1 Tax=Candida...    84   2e-15
UniRef50_B4D3Z7 GreA/GreB family elongation factor n=1 Tax=Chtho...    83   2e-15
UniRef50_Q9Z7G4 Transcription elongation factor greA n=13 Tax=Ch...    83   3e-15
UniRef50_B2UNZ9 GreA/GreB family elongation factor n=1 Tax=Akker...    83   4e-15
UniRef50_UPI0001C31C12 transcription elongation factor GreA n=1 ...    81   9e-15
UniRef50_C6XVH8 Transcription elongation factor n=1 Tax=Pedobact...    81   1e-14
UniRef50_UPI0001746B72 nucleoside diphosphate kinase regulator p...    81   1e-14
UniRef50_B4RDE4 Transcription elongation factor GreA/GreB, famil...    81   1e-14
UniRef50_B6BTF1 GreA/GreB family elongation factor n=2 Tax=Betap...    80   2e-14
UniRef50_B9E669 Transcription elongation factor n=5 Tax=Clostrid...    79   3e-14
UniRef50_UPI0000E87FB5 transcription elongation factor GreB n=1 ...    79   4e-14
UniRef50_A9KJU6 GreA/GreB family elongation factor n=8 Tax=Clost...    79   5e-14
UniRef50_Q1IZY0 GreA/GreB family elongation factor n=4 Tax=Deino...    78   6e-14
UniRef50_C1CW74 Putative transcription elongation factor n=1 Tax...    78   1e-13
UniRef50_B4RBL3 Transcription elongation factor GreA/GreB family...    77   1e-13
UniRef50_Q1IXC6 GreA/GreB family elongation factor n=1 Tax=Deino...    77   2e-13
UniRef50_D2PP26 Transcription elongation factor GreA n=3 Tax=Act...    75   6e-13
UniRef50_C0QME5 GreA2 n=1 Tax=Desulfobacterium autotrophicum HRM...    74   1e-12
UniRef50_Q9RRW0 Transcription elongation factor n=1 Tax=Deinococ...    74   2e-12
UniRef50_C1ABM5 Transcription elongation factor GreA n=1 Tax=Gem...    74   2e-12
UniRef50_C0ZE34 Putative uncharacterized protein n=1 Tax=Breviba...    73   3e-12
UniRef50_Q930S1 Putative uncharacterized protein n=1 Tax=Sinorhi...    73   3e-12
UniRef50_B8DTJ6 Transcription elongation factor GreA n=15 Tax=Bi...    72   4e-12
UniRef50_C7M0F0 GreA/GreB family elongation factor n=1 Tax=Acidi...    72   4e-12
UniRef50_A1TE43 Transcription elongation factor greA n=11 Tax=Co...    72   5e-12
UniRef50_A3DJU3 GreA/GreB family elongation factor n=3 Tax=Clost...    71   9e-12
UniRef50_A4F866 Transcription elongation factor greA n=44 Tax=Ac...    71   1e-11
UniRef50_B0T2S8 GreA/GreB family elongation factor n=15 Tax=Alph...    70   2e-11
UniRef50_Q1YFK5 Possible transcription elongation factor, GreA/G...    70   3e-11
UniRef50_A4CMC2 Putative uncharacterized protein n=1 Tax=Robigin...    70   3e-11
UniRef50_A1A150 Transcription elongation factor GreA n=6 Tax=Bif...    69   3e-11
UniRef50_D2KXD7 Transcription elongation factor n=1 Tax=Lactobac...    69   5e-11
UniRef50_A1TEF4 GreA/GreB family elongation factor n=5 Tax=Actin...    69   6e-11
UniRef50_C1A2Y4 Transcription elongation factor greA n=41 Tax=Co...    68   1e-10
UniRef50_A4T6M8 GreA/GreB family elongation factor n=3 Tax=Mycob...    66   4e-10
UniRef50_A8LPH9 Putative uncharacterized protein n=1 Tax=Dinoros...    66   5e-10
UniRef50_A6DK30 Putative uncharacterized protein n=1 Tax=Lentisp...    65   6e-10
UniRef50_C9Z2D0 Putative uncharacterized protein n=1 Tax=Strepto...    65   7e-10
UniRef50_A9EFE9 Putative uncharacterized protein n=1 Tax=Oceanib...    65   8e-10
UniRef50_A5VFW5 GreA/GreB family elongation factor n=3 Tax=Sphin...    65   9e-10
UniRef50_C4RPW8 Transcription elongation factor n=1 Tax=Micromon...    64   1e-09
UniRef50_UPI0001B58AC8 GreA/GreB family elongation factor n=1 Ta...    64   1e-09
UniRef50_B1ZU18 GreA/GreB family elongation factor n=1 Tax=Opitu...    64   2e-09
UniRef50_D1N5G0 GreA/GreB family elongation factor n=1 Tax=Victi...    62   4e-09
UniRef50_B9ZS32 GreA/GreB family elongation factor n=1 Tax=Thioa...    62   5e-09
UniRef50_A0JU41 GreA/GreB family elongation factor n=21 Tax=Acti...    62   7e-09
UniRef50_Q97HP4 Transcription elongation factor n=1 Tax=Clostrid...    61   1e-08
UniRef50_A1RN18 GreA/GreB family elongation factor n=11 Tax=Shew...    61   1e-08
UniRef50_B2GLP4 Transcription elongation factor n=3 Tax=Actinomy...    60   2e-08
UniRef50_Q0PQI1 Transcription elongation factor (Fragment) n=1 T...    60   2e-08
UniRef50_C4DV10 Putative uncharacterized protein n=1 Tax=Stackeb...    60   2e-08
UniRef50_Q67NL4 Putative transcription elongation factor n=1 Tax...    59   3e-08
UniRef50_Q2CH34 Putative uncharacterized protein n=2 Tax=Oceanic...    59   4e-08
UniRef50_Q5QX13 Transcription elongation factor greA/greB family...    59   5e-08
UniRef50_A6NYB0 Putative uncharacterized protein n=1 Tax=Bactero...    59   6e-08
UniRef50_Q0BS89 Transcription elongation factor greB n=1 Tax=Gra...    57   2e-07
UniRef50_D2NP88 Transcription elongation factor n=2 Tax=Rothia m...    57   2e-07
UniRef50_C4DVL0 Transcription elongation factor n=1 Tax=Stackebr...    57   2e-07
UniRef50_D0M4S6 Putative uncharacterized protein n=7 Tax=Vibrio ...    56   3e-07
UniRef50_Q1DFU3 GreA/GreB domain protein n=3 Tax=Myxococcales Re...    56   5e-07
UniRef50_D1CSU3 Transcription elongation factor (Fragment) n=1 T...    55   8e-07
UniRef50_Q83FN6 Transcription elongation factor n=3 Tax=Micrococ...    54   1e-06
UniRef50_UPI0001AF7313 transcription elongation factor GreA n=1 ...    53   3e-06
UniRef50_C6UNA6 Putative transcription elongation factor GreA n=...    52   5e-06
UniRef50_UPI0001AF7314 transcription elongation factor GreA n=1 ...    52   8e-06
UniRef50_C1YJ21 Transcription elongation factor n=3 Tax=Actinomy...    51   9e-06
UniRef50_A4FCQ0 Transcription elongation factor G n=1 Tax=Saccha...    49   5e-05
UniRef50_Q2SLP2 Transcription elongation factor n=1 Tax=Hahella ...    49   6e-05
UniRef50_D0J1H3 Putative uncharacterized protein n=1 Tax=Comamon...    48   7e-05
UniRef50_B2IF32 DNA helicase, putative n=2 Tax=Rhizobiales RepID...    48   7e-05
UniRef50_A0QE66 Transcription elongation factor GreA n=2 Tax=Myc...    48   1e-04
UniRef50_A3M8R9 Putative uncharacterized protein n=2 Tax=Acineto...    47   2e-04
UniRef50_Q0VMM9 Putative uncharacterized protein n=2 Tax=Alcaniv...    47   3e-04
UniRef50_C7MX98 Transcription elongation factor n=1 Tax=Saccharo...    46   3e-04
UniRef50_P65095 Uncharacterized protein Rv3788/MT3896 n=17 Tax=M...    45   8e-04
UniRef50_UPI0001AEE145 nucleoside diphosphate kinase regulator n...    44   0.001
UniRef50_A9EFU2 Nucleoside diphosphate kinase regulator n=1 Tax=...    44   0.001
UniRef50_Q39Z43 GreA/GreB family elongation factor n=18 Tax=Prot...    44   0.002
UniRef50_D0M044 Transcription elongation factor n=15 Tax=Vibrion...    44   0.002
UniRef50_C0BIS2 GreA/GreB family elongation factor n=1 Tax=Flavo...    43   0.002
UniRef50_A8H435 GreA/GreB family elongation factor n=2 Tax=Shewa...    43   0.003
UniRef50_Q0F3H5 GreA/GreB family elongation factor n=1 Tax=Marip...    42   0.004
UniRef50_B2A7T5 Putative uncharacterized protein n=1 Tax=Natrana...    42   0.005
UniRef50_A4VNK9 Transcription elongation factor n=1 Tax=Pseudomo...    42   0.006
UniRef50_B5FBA9 Transcription elongation factor n=2 Tax=Vibrio f...    42   0.007
UniRef50_Q1MZY3 Putative uncharacterized protein n=1 Tax=Bermane...    42   0.007
UniRef50_UPI0001B57B91 nucleoside diphosphate kinase regulator n...    41   0.008
UniRef50_A6VXC9 GreA/GreB family elongation factor n=2 Tax=Marin...    41   0.013
UniRef50_Q3A1F8 GreA/GreB family elongation factor n=4 Tax=Desul...    41   0.017
UniRef50_Q4K8S4 Putative uncharacterized protein n=1 Tax=Pseudom...    41   0.018
UniRef50_B6EH16 Putative uncharacterized protein n=1 Tax=Aliivib...    40   0.019
UniRef50_B8CMM7 Transcription elongation factor n=1 Tax=Shewanel...    40   0.022
UniRef50_B4D7C3 GreA/GreB family elongation factor n=1 Tax=Chtho...    40   0.022
UniRef50_C0A4E5 Putative uncharacterized protein n=1 Tax=Opituta...    40   0.027
UniRef50_A5W772 GreA/GreB family elongation factor n=5 Tax=Prote...    40   0.027
UniRef50_A5F491 Putative uncharacterized protein n=31 Tax=Vibrio...    40   0.029
UniRef50_D1QR39 Putative uncharacterized protein n=1 Tax=Prevote...    39   0.038
UniRef50_D1SQ94 Putative uncharacterized protein n=1 Tax=Acidovo...    39   0.041
UniRef50_A1AQR3 GreA/GreB family elongation factor n=4 Tax=Desul...    39   0.043
UniRef50_B1ZXU0 GreA/GreB family elongation factor n=1 Tax=Opitu...    39   0.044

>UniRef50_Q2LTP9 Transcription elongation factor n=2 Tax=Deltaproteobacteria
           RepID=Q2LTP9_SYNAS
          Length = 134

 Score =  167 bits (424), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 61/136 (44%), Positives = 85/136 (62%), Gaps = 2/136 (1%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           M++  I + + D ER++ LLE         A +L AEL  A +   EEMP DVVTMNS V
Sbjct: 1   MNKRRIYVTEQDMERLEDLLETS--KKSEYARSLEAELVNAVVVPSEEMPPDVVTMNSCV 58

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
            F +L+ G     TLVYP +   ++ ++SV+APVG+AL+GL VG +I W +P G    L 
Sbjct: 59  CFEDLTTGNRETITLVYPGQANMASGRVSVLAPVGSALIGLSVGQTIEWPMPNGRKRRLR 118

Query: 121 VLELEYQPEAAGDYLL 136
           ++E+ YQPEAAGD+ L
Sbjct: 119 IVEVLYQPEAAGDFHL 134


>UniRef50_C5S652 GreA/GreB family elongation factor n=2 Tax=Proteobacteria
           RepID=C5S652_CHRVI
          Length = 171

 Score =  166 bits (420), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 65/133 (48%), Positives = 86/133 (64%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
           S+P II++ LDAER++ L+E       P  D L AEL RA++  P EMP +VV+MNS V+
Sbjct: 37  SQPKIILSSLDAERLENLIESLPRNAFPGMDELEAELARAEVVDPREMPPNVVSMNSTVR 96

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           FR +S  E    TLVYP  M  S  ++S++APVG+ALLGL  GD I W  PGG    + +
Sbjct: 97  FRVMSTNEAFTLTLVYPKDMDASGGKISILAPVGSALLGLSSGDEIEWPKPGGGVLRVRI 156

Query: 122 LELEYQPEAAGDY 134
            E+ YQPE AG+Y
Sbjct: 157 EEVTYQPERAGEY 169


>UniRef50_P0AFW6 Regulator of nucleoside diphosphate kinase n=155
           Tax=Enterobacteriaceae RepID=RNK_ECO57
          Length = 136

 Score =  160 bits (405), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 136/136 (100%), Positives = 136/136 (100%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV
Sbjct: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
           KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE
Sbjct: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120

Query: 121 VLELEYQPEAAGDYLL 136
           VLELEYQPEAAGDYLL
Sbjct: 121 VLELEYQPEAAGDYLL 136


>UniRef50_Q3BX42 Regulator of nucleoside diphosphate kinase n=9
           Tax=Gammaproteobacteria RepID=Q3BX42_XANC5
          Length = 146

 Score =  158 bits (401), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 58/131 (44%), Positives = 84/131 (64%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFR 63
           P+I+++  D  R++ LL+ PA+   P A AL+ EL RA++  P+++P DVVTM+SR++  
Sbjct: 11  PSILVSSHDLARLEALLDSPAFNKHPAATALSDELGRARVLPPDQIPGDVVTMHSRIECE 70

Query: 64  NLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLE 123
           +   GE    TLVYP +    + ++SV+APVG+ALLGL VG SI W  P G    L V  
Sbjct: 71  DQLHGERHTLTLVYPHEADVQHGRISVLAPVGSALLGLSVGQSIDWRTPDGRDLRLRVTA 130

Query: 124 LEYQPEAAGDY 134
           +  QP AAGD+
Sbjct: 131 VHDQPAAAGDF 141


>UniRef50_A6VVR5 GreA/GreB family elongation factor n=15 Tax=Proteobacteria
           RepID=A6VVR5_MARMS
          Length = 137

 Score =  158 bits (399), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 58/136 (42%), Positives = 88/136 (64%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           M RP I I+ LDA R++ +L+  +Y+  P  D L  E++RA++  P +MP ++VTMNS V
Sbjct: 2   MQRPQITISSLDAVRLEKILDSLSYSQFPNKDDLQEEINRAEIVEPRDMPDNIVTMNSTV 61

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
            F+ LS  +   +TLVYP     +   +SV+APVG+ALLGL+ GD I W  P G    + 
Sbjct: 62  TFKVLSSEKEFSKTLVYPKDANGAEDTVSVLAPVGSALLGLKEGDQIDWPKPNGDVLSVV 121

Query: 121 VLELEYQPEAAGDYLL 136
           +++++YQPE AG++ L
Sbjct: 122 IMKVDYQPERAGEFQL 137


>UniRef50_B5EI69 GreA/GreB family elongation factor n=6 Tax=Desulfuromonadales
           RepID=B5EI69_GEOBB
          Length = 143

 Score =  154 bits (391), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 52/138 (37%), Positives = 86/138 (62%), Gaps = 4/138 (2%)

Query: 2   SRPTIIINDLDAERIDILLEQPAY---AGLPIADALNAELDRAQMCSPEEMPHDVVTMNS 58
           ++  +++ + D ER++ L+++              L  EL RA++  P  +P DV+TMNS
Sbjct: 7   AQRQVVVTEFDMERLEALIDKARSTQTRDSKNLKELGEELVRAEVVDPAGIPPDVITMNS 66

Query: 59  RVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATH 118
           +V  ++L   E  V TLV+P +   ++ ++S++APVG A++G R GD I W +PGG+  +
Sbjct: 67  KVCLQDLDSEEELVYTLVFPNEADLASGKISILAPVGTAMIGFRTGDRITWPVPGGM-KN 125

Query: 119 LEVLELEYQPEAAGDYLL 136
           L+V ++ YQPEAAGDY L
Sbjct: 126 LKVKKILYQPEAAGDYHL 143


>UniRef50_A0LL17 GreA/GreB family elongation factor n=3 Tax=Bacteria
           RepID=A0LL17_SYNFM
          Length = 141

 Score =  153 bits (387), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 50/140 (35%), Positives = 78/140 (55%), Gaps = 6/140 (4%)

Query: 2   SRPTIIINDLDAERIDILLE-----QPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTM 56
            R  I ++D D +R++ L+E     +           L  EL +A++ +   +P D VTM
Sbjct: 3   KRRKIYVSDYDMKRLEKLIELLSEDEWDDRDTKHLQVLEEELRKAEVVAARNIPRDTVTM 62

Query: 57  NSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVA 116
           NS+V+ ++L  G   +  LV+P +      ++SV+AP+G AL+G  VGD I W +P G  
Sbjct: 63  NSKVRVKDLDTGIETIYHLVFPGEADVKQNRISVLAPIGTALIGYAVGDVIQWNVPAGT- 121

Query: 117 THLEVLELEYQPEAAGDYLL 136
             L + E+ YQPEAAGD+ L
Sbjct: 122 KKLRIEEILYQPEAAGDFHL 141


>UniRef50_B8GS58 GreA/GreB family elongation factor n=22 Tax=Proteobacteria
           RepID=B8GS58_THISH
          Length = 137

 Score =  153 bits (387), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 59/133 (44%), Positives = 86/133 (64%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKF 62
           +P+I ++ LD +R++ LL+      L     L AEL+RA +  P ++P  +VTMNSRV+F
Sbjct: 4   QPSITLSSLDLDRLEHLLDSLPREALANHRQLLAELERANVVEPSQVPPTLVTMNSRVRF 63

Query: 63  RNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVL 122
           R   +G    RTLVYP+ M     ++SV+AP+G+ALLGL VGDSI W  P G   ++ ++
Sbjct: 64  RVEPEGREFQRTLVYPSGMDGDEEKISVLAPIGSALLGLSVGDSIAWPTPKGGEMNVRIM 123

Query: 123 ELEYQPEAAGDYL 135
           E+ YQPEAAG+  
Sbjct: 124 EILYQPEAAGEMH 136


>UniRef50_Q6MQZ8 Regulator of nucleoside diphosphate kinase n=1 Tax=Bdellovibrio
           bacteriovorus RepID=Q6MQZ8_BDEBA
          Length = 138

 Score =  153 bits (387), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 58/135 (42%), Positives = 84/135 (62%), Gaps = 3/135 (2%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
           + P I++ D D  R+  L+   +    P A+AL  EL RA + + +E+P +VVTMNSRV+
Sbjct: 7   TEPRILVTDQDFHRLSALV---SQVEGPFAEALEEELSRANVIAQKEIPKNVVTMNSRVQ 63

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           F +   G+    TLVYP        +LS++APVG ALLGL VG  I+W+LP G +  L+V
Sbjct: 64  FLDEVSGQESEMTLVYPQDAKLEEGRLSILAPVGIALLGLSVGQEINWKLPNGQSKKLKV 123

Query: 122 LELEYQPEAAGDYLL 136
             + YQPEA+G++ L
Sbjct: 124 QAVTYQPEASGNFDL 138


>UniRef50_Q1H3Z9 GreA/GreB family elongation factor n=1 Tax=Methylobacillus
           flagellatus KT RepID=Q1H3Z9_METFK
          Length = 138

 Score =  146 bits (370), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 57/139 (41%), Positives = 83/139 (59%), Gaps = 4/139 (2%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIAD---ALNAELDRAQMCSPEEMPHDVVTMN 57
           M +  I +   D +R+  ++EQ    G P  D    L  EL R++    E++  DVVTMN
Sbjct: 1   MLQGAIQVTSFDMDRLFSMIEQLRKNGFPETDNLARLEDELARSEEVPSEQVGADVVTMN 60

Query: 58  SRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVAT 117
           SRV  R+ ++G     TLV+P+    S  ++SV+AP+G A+LG RVGD I W +PGG   
Sbjct: 61  SRVLLRDEANGHEMSCTLVFPSDADASANRISVVAPLGTAILGYRVGDVIDWAMPGG-VR 119

Query: 118 HLEVLELEYQPEAAGDYLL 136
              +L+++YQPEAAGD+ L
Sbjct: 120 QYRILKIDYQPEAAGDFHL 138


>UniRef50_Q11P04 Transcription elongation factor n=1 Tax=Cytophaga hutchinsonii ATCC
           33406 RepID=Q11P04_CYTH3
          Length = 149

 Score =  145 bits (367), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 46/135 (34%), Positives = 73/135 (54%), Gaps = 4/135 (2%)

Query: 5   TIIINDLDAERIDILLEQPAYAGLP---IADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
             IIN LD  RI   + +           A++L  EL   ++  PEE+P++VVTM+S V 
Sbjct: 16  RTIINKLDYSRIQQCINEAKQFKSISVVEANSLMNELKLGKLVEPEEIPNNVVTMHSIVT 75

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
              +   +     LVYP K    N ++S+ +P+  AL+G ++GD I W +P G+   +++
Sbjct: 76  IVFMDSNKRVEFQLVYPDKADVKNNKISIFSPIATALIGYQIGDEIEWCVPAGMT-KIKI 134

Query: 122 LELEYQPEAAGDYLL 136
             + YQPEAAG + L
Sbjct: 135 ESIAYQPEAAGHFNL 149


>UniRef50_C6RP41 GreA/GreB family elongation factor n=4 Tax=Acinetobacter
           RepID=C6RP41_ACIRA
          Length = 134

 Score =  143 bits (361), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 50/134 (37%), Positives = 74/134 (55%), Gaps = 1/134 (0%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           M++P III+  D  R++ +LE  +       + L  EL RA++  P E+P +VV+MN+RV
Sbjct: 1   MAKPNIIISSQDLHRLETMLEHQS-HMTQTIEHLEDELARAEVVEPHEIPANVVSMNTRV 59

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
                   E     LVYP        Q++V+AP+GAA+LGL  G  I W  P G    ++
Sbjct: 60  LITIAPSTEPTEIQLVYPHDFRGDKGQVNVLAPIGAAILGLAEGQEIEWPQPDGHLMKVK 119

Query: 121 VLELEYQPEAAGDY 134
           + ++ YQPE  GDY
Sbjct: 120 IEKVLYQPEREGDY 133


>UniRef50_B0SEQ9 Transcription elongation factor n=2 Tax=Leptospira biflexa serovar
           Patoc RepID=B0SEQ9_LEPBA
          Length = 138

 Score =  141 bits (356), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 46/137 (33%), Positives = 76/137 (55%), Gaps = 3/137 (2%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAG--LPIADALNAELDRAQMCSPEEMPHDVVTMNSR 59
           ++  I I +LD  R+  ++ + +           L  E++RAQ    +++P +VVTMNS 
Sbjct: 3   TKKKISITNLDYIRLKKMILEYSKRNKTDANVQDLLGEIERAQKVDSKQIPSNVVTMNSV 62

Query: 60  VKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHL 119
           ++ +NL   E +   LVYP        Q+S++AP+  A +G + GD I W +P GV    
Sbjct: 63  IEIKNLEGIEFKEFRLVYPEDSNLDQNQISILAPIATASIGYKTGDVIFWNVPDGVYR-F 121

Query: 120 EVLELEYQPEAAGDYLL 136
           ++ E++YQPEA GD+ L
Sbjct: 122 QITEIKYQPEANGDFHL 138


>UniRef50_A4XNX9 GreA/GreB family elongation factor n=16 Tax=Bacteria
           RepID=A4XNX9_PSEMY
          Length = 135

 Score =  140 bits (354), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 64/132 (48%), Positives = 81/132 (61%), Gaps = 2/132 (1%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFR 63
           P I I  LD +R++ LL+     G P A AL AELDRA++   +E+P  +VTMNSRV  R
Sbjct: 5   PAITITRLDLQRLERLLDSLDEFG-PGAAALQAELDRAEVVGLDEVPAGLVTMNSRVHCR 63

Query: 64  NLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLE 123
             S G+    TLVYP         +S++APVG+ALLGL VG  I W  PGG    L +L 
Sbjct: 64  EESSGKDYHLTLVYPQDAG-GEGTVSILAPVGSALLGLSVGQHIDWPAPGGKQLKLTLLA 122

Query: 124 LEYQPEAAGDYL 135
           +EYQPEAAG+Y 
Sbjct: 123 VEYQPEAAGEYD 134


>UniRef50_Q7MD62 Transcription elongation factor n=10 Tax=Proteobacteria
           RepID=Q7MD62_VIBVY
          Length = 135

 Score =  140 bits (354), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 57/132 (43%), Positives = 87/132 (65%), Gaps = 2/132 (1%)

Query: 5   TIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRN 64
           +I ++ LD +RI  LLE+ A    P  + L  ELDRA + +P++MP ++VTMNS V+F  
Sbjct: 6   SICVSTLDMDRISALLEKMAN-LSPELEKLENELDRANVLAPQQMPDNIVTMNSTVRFTF 64

Query: 65  LSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
           +   +V  +TLVYP ++ + +  +S+ APVG+ALLGL VG  + W +PGG    +E+LE+
Sbjct: 65  VGSDKVMEKTLVYPDQVRNPDD-VSIFAPVGSALLGLSVGQQLTWPMPGGAERTIEILEV 123

Query: 125 EYQPEAAGDYLL 136
            YQPE  G++ L
Sbjct: 124 TYQPERMGEFHL 135


>UniRef50_B9MBQ3 GreA/GreB family elongation factor n=6 Tax=Betaproteobacteria
           RepID=B9MBQ3_DIAST
          Length = 135

 Score =  140 bits (353), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 62/134 (46%), Positives = 82/134 (61%), Gaps = 2/134 (1%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
            +P II++ LD ERI+ LLE+      P  +AL AELDRA +  P++MP +VVTMNS V+
Sbjct: 3   RKPHIILSSLDLERIEALLEKQTAP-FPGREALEAELDRADVFDPKDMPPNVVTMNSTVR 61

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           F  L  G+    TLVYP +M  S  ++SV APVG ALLGL VGD      P G    + V
Sbjct: 62  FTLLETGKTNTLTLVYPKEMDGSGDKVSVFAPVGIALLGLGVGDEFQMPSPTG-QVTVRV 120

Query: 122 LELEYQPEAAGDYL 135
             +++QPE AG+  
Sbjct: 121 DAIDFQPENAGELH 134


>UniRef50_B9NGJ6 Predicted protein n=12 Tax=cellular organisms RepID=B9NGJ6_POPTR
          Length = 145

 Score =  139 bits (352), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 55/136 (40%), Positives = 85/136 (62%), Gaps = 3/136 (2%)

Query: 2   SRP-TIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           SRP T+ + +LD  R++ +  +   A L   + L+A L+RA + SP+ +P DVVTMNSRV
Sbjct: 12  SRPATLYLTELDVTRLEGIASRAGTAELD--EMLDALLERAAIVSPDAIPKDVVTMNSRV 69

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
                 + + R  TLVYP     +  +LSV++P+G ALLG R GD++ + LP G A  + 
Sbjct: 70  VCALEGEAKPRDWTLVYPDDADLATGRLSVLSPIGQALLGARSGDTVDYRLPDGRAQRVT 129

Query: 121 VLELEYQPEAAGDYLL 136
           ++E+ +QPEA+G + L
Sbjct: 130 IVEIAFQPEASGQFTL 145


>UniRef50_A9GAI2 Regulator of nucleoside diphosphate kinase n=1 Tax=Sorangium
           cellulosum 'So ce 56' RepID=A9GAI2_SORC5
          Length = 140

 Score =  139 bits (351), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 48/135 (35%), Positives = 74/135 (54%), Gaps = 4/135 (2%)

Query: 5   TIIINDLDAERIDILLEQPAYA---GLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
            I++ + D +R+  LLE          P  +AL  E++RA +  P ++P +VVTMNSRV+
Sbjct: 7   PIVLTEFDRDRLARLLEALRARPGGDSPNLEALEIEIERADVVKPADIPPNVVTMNSRVE 66

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
             +L   E    T+V+P      + ++SV+AP+G ALLG R  D + W  P      L +
Sbjct: 67  LVDLDTEERLCVTVVFPGNADVKSGRISVLAPMGLALLGCREADEVEWPTPS-RTRRLRI 125

Query: 122 LELEYQPEAAGDYLL 136
             + YQPEA+G + L
Sbjct: 126 ERIAYQPEASGRFDL 140


>UniRef50_B5JTX6 Transcription elongation factor n=1 Tax=gamma proteobacterium
           HTCC5015 RepID=B5JTX6_9GAMM
          Length = 138

 Score =  138 bits (349), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 53/135 (39%), Positives = 80/135 (59%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
           + P I + +LD  RI+ LLE+           L  EL R ++ S +E+  DVVTMNSRVK
Sbjct: 4   THPPITLPELDVARIESLLEKLDLKAKNNHTELFEELYRCRIVSSQEVSPDVVTMNSRVK 63

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           +  L   +    TL YP +++ ++  +S++AP+G+A++GL VG  I W LP G    L +
Sbjct: 64  YTRLDTQQQSTLTLCYPDQISRADDAVSILAPIGSAIIGLSVGQIIDWPLPNGKNAPLRI 123

Query: 122 LELEYQPEAAGDYLL 136
            EL +QPE +G+Y L
Sbjct: 124 DELLFQPERSGNYTL 138


>UniRef50_Q13WN5 GreA/GreB family elongation factor n=50 Tax=Burkholderia
           RepID=Q13WN5_BURXL
          Length = 136

 Score =  137 bits (346), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 44/135 (32%), Positives = 72/135 (53%), Gaps = 1/135 (0%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
              T  + +LD  R++        A   + D L+  L+RA +    E+P +VVTMNS+  
Sbjct: 3   KTKTCYLTELDVARLEKHA-AAPGADARLQDMLDDVLERAVIVDSHEIPANVVTMNSQAT 61

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
             + + GE    T+VYP     ++ +L+V +P G ALLG + G+ I +  P G    L++
Sbjct: 62  LVDETSGEHMTWTVVYPPNADFAHGRLNVFSPAGLALLGAKRGERIRFTPPSGTEKVLKL 121

Query: 122 LELEYQPEAAGDYLL 136
            ++ +QPEAA D+ L
Sbjct: 122 EKILFQPEAADDFTL 136


>UniRef50_B8G0E1 GreA/GreB family elongation factor n=2 Tax=Desulfitobacterium
           hafniense RepID=B8G0E1_DESHD
          Length = 138

 Score =  137 bits (346), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 56/140 (40%), Positives = 79/140 (56%), Gaps = 6/140 (4%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAY----AGLPIADALNAELDRAQMCSPEEMPHDVVTM 56
           MSR  I I  +D ER+  L+ +               L  EL+ A +   E++P + +TM
Sbjct: 1   MSR-KISITAVDRERLLKLINKEREFGSAKNKDYLKDLEHELNGADVVPSEKIPGNAITM 59

Query: 57  NSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVA 116
           NSR+  ++L  GE  V TLVYP        ++S++APVG A+LG   GD I W++PGGV 
Sbjct: 60  NSRILLKDLETGEETVYTLVYPEDADLLEDKISILAPVGTAILGYLEGDIIDWKVPGGVV 119

Query: 117 THLEVLELEYQPEAAGDYLL 136
              +V ++ YQPEAAGDY L
Sbjct: 120 R-FKVEKILYQPEAAGDYHL 138


>UniRef50_Q3K4S3 Regulator of nucleoside diphosphate kinase n=2 Tax=Pseudomonas
           fluorescens RepID=Q3K4S3_PSEPF
          Length = 136

 Score =  134 bits (339), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 60/135 (44%), Positives = 81/135 (60%), Gaps = 2/135 (1%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRA-QMCSPEEMPHDVVTMNSR 59
           M+ P+I +  LD +R++ L++      LP   AL  ELDRA  +   +E+P DVVTMNSR
Sbjct: 1   MTAPSITLTRLDVQRLERLIDSLDDT-LPGVIALQTELDRADTLVGHDEVPADVVTMNSR 59

Query: 60  VKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHL 119
           V  R  S G+    TLVYP        ++S++APVG+ALLGL+VG  I W  PGG    L
Sbjct: 60  VHCREESSGKDYHLTLVYPKHANADEGKVSILAPVGSALLGLKVGQHIDWPAPGGKTLKL 119

Query: 120 EVLELEYQPEAAGDY 134
            +LE+E QP   GD+
Sbjct: 120 TLLEVESQPSNGGDF 134


>UniRef50_A9MBQ4 GreA/GreB family elongation factor n=36 Tax=Brucella
           RepID=A9MBQ4_BRUC2
          Length = 169

 Score =  134 bits (338), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 46/123 (37%), Positives = 73/123 (59%), Gaps = 1/123 (0%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
            +P I+++++D ER+  L    +     IA+ L AELDRA++ + + +P +VV M S V+
Sbjct: 7   KKPNIVVSEVDYERLMGLASNASERFEEIAEELMAELDRAKVVTAKRIPENVVQMGSTVE 66

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           FR  +DG  R  TLVYP +   +  ++S++ P+G AL+GL  G SI W    G    L V
Sbjct: 67  FR-ANDGHERRVTLVYPGEADIAKNRISILTPIGTALIGLAPGQSISWTARDGKQHELNV 125

Query: 122 LEL 124
           L++
Sbjct: 126 LKV 128


>UniRef50_C9P6Y2 Regulator of nucleoside diphosphate kinase n=1 Tax=Vibrio
           metschnikovii CIP 69.14 RepID=C9P6Y2_VIBME
          Length = 136

 Score =  133 bits (336), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 54/131 (41%), Positives = 81/131 (61%), Gaps = 2/131 (1%)

Query: 5   TIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRN 64
            II++ LD +RI  L+++         + L  ELDRA + +PEE+P DVVTMNS VKF+ 
Sbjct: 7   AIIVSTLDMDRISALMDKLP-KLSKELERLENELDRATVLNPEEIPADVVTMNSTVKFKF 65

Query: 65  LSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
               +V  +TLVYP  +  ++  +S+ APVG+ALLGL  G  + W +P GV   +E++++
Sbjct: 66  QGSDDVMQKTLVYPHDVKGNDD-ISIFAPVGSALLGLSKGQQLTWPMPNGVERTIEIIDI 124

Query: 125 EYQPEAAGDYL 135
             QPE  G+Y 
Sbjct: 125 IDQPERNGEYN 135


>UniRef50_Q3SMM4 GreA/GreB family elongation factor n=1 Tax=Thiobacillus
           denitrificans ATCC 25259 RepID=Q3SMM4_THIDA
          Length = 138

 Score =  133 bits (336), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 62/134 (46%), Positives = 81/134 (60%), Gaps = 1/134 (0%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
           +RP I +++ D ER++ +L       LP A+AL  ELDRA++  PE MP DVVTMNSR++
Sbjct: 5   TRPAITVSERDLERLEDMLAGLPD-DLPGAEALRDELDRAEILRPEAMPADVVTMNSRIR 63

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           F     G+    TLVYP   T S  QL V  P G A+LGL VG  I W+ P G      +
Sbjct: 64  FVVEPAGKEMEMTLVYPRDFTGSPDQLPVTTPAGIAVLGLAVGQEIEWQAPNGQKVGARI 123

Query: 122 LELEYQPEAAGDYL 135
           ++L YQPE AGDY+
Sbjct: 124 VDLAYQPERAGDYM 137


>UniRef50_B2SQJ5 Regulator of nucleoside diphosphate kinase n=8 Tax=Xanthomonadaceae
           RepID=B2SQJ5_XANOP
          Length = 215

 Score =  133 bits (336), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 47/130 (36%), Positives = 73/130 (56%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFR 63
           P+ +++  D  R + LL+ P++   P A AL+ EL RA++  P+++  DVVTM+SR++  
Sbjct: 83  PSTLVSSHDLARREALLDSPSFNKHPAATALSDELGRARVLPPDQIRGDVVTMHSRIECE 142

Query: 64  NLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLE 123
           +   G       V+P +    + ++ V+APVG+AL GL VG  I W  P G    L    
Sbjct: 143 DQLHGGRHTLPPVHPHEADVQHGRICVLAPVGSALGGLSVGQRIDWRTPDGRDLRLRATA 202

Query: 124 LEYQPEAAGD 133
           +  QP AAGD
Sbjct: 203 VHDQPTAAGD 212


>UniRef50_C6X5Q8 Transcription elongation factor n=1 Tax=Flavobacteriaceae bacterium
           3519-10 RepID=C6X5Q8_FLAB3
          Length = 170

 Score =  132 bits (334), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 48/136 (35%), Positives = 71/136 (52%), Gaps = 4/136 (2%)

Query: 4   PTIIINDLDAERIDILLEQPAYAG---LPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
             III   D+ RI   +             A+ L  EL  A++    ++P DVVTMNS V
Sbjct: 36  KQIIITKQDSTRIHKSIMDAKKNNSIKAEDAERLLRELHSAKIVESADIPADVVTMNSVV 95

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
           K    ++  V    +VYP +    + ++S+ +PV AAL+G  V D I W +P G+   + 
Sbjct: 96  KIHFENNKTVTEFKIVYPEQANIKDRKISIFSPVAAALIGYSVNDEIDWIVPSGMTKII- 154

Query: 121 VLELEYQPEAAGDYLL 136
           + E+ YQPEAAGD+ L
Sbjct: 155 IDEIIYQPEAAGDFDL 170


>UniRef50_Q4KB20 Acetyltransferase, GNAT family family n=9 Tax=Bacteria
           RepID=Q4KB20_PSEF5
          Length = 379

 Score =  132 bits (334), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 44/131 (33%), Positives = 71/131 (54%), Gaps = 6/131 (4%)

Query: 6   IIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNL 65
           I I ++D  R++ L+    +   P    L  EL+RA +  P+++  +V+TMNSR   +  
Sbjct: 255 IYITEIDKARLESLI---VFEQGPTIVELEHELERAIVVKPQQVARNVITMNSRALLQLD 311

Query: 66  SDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
              E     LVYP     +  + SV + +GAA+LG + GD+I W +       +E+ ++ 
Sbjct: 312 D--EEIEVALVYPEDADSTAGKHSVYSDIGAAILGYQEGDTIDWRISD-RTRRIEIRKVL 368

Query: 126 YQPEAAGDYLL 136
           YQPEAAGD+ L
Sbjct: 369 YQPEAAGDFHL 379


>UniRef50_A6C278 Nucleoside diphosphate kinase regulator protein, putative n=1
           Tax=Planctomyces maris DSM 8797 RepID=A6C278_9PLAN
          Length = 137

 Score =  132 bits (334), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 49/135 (36%), Positives = 71/135 (52%), Gaps = 4/135 (2%)

Query: 1   MSRPTIIINDLDAERIDILLEQ---PAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMN 57
           M +  I I   D +R+  LL      A    P    L+AEL  A +   EE+P D+VTMN
Sbjct: 1   MPQQKIFITKTDYQRLQNLLLSDFTQAIGNKPYLSGLHAELAVAHIVESEEIPADIVTMN 60

Query: 58  SRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVAT 117
           S V+ R+L   E+   TLVYP        +LS++ P+G A+LG R+GD +      G + 
Sbjct: 61  STVRLRDLETDELETYTLVYPQDANIKEGKLSILTPIGTAILGYRIGDQLRSRALAGGS- 119

Query: 118 HLEVLELEYQPEAAG 132
            + V E+ +QPE +G
Sbjct: 120 KIRVEEILFQPERSG 134


>UniRef50_Q74EX3 Nucleoside diphosphate kinase regulator protein, putative n=1
           Tax=Geobacter sulfurreducens RepID=Q74EX3_GEOSL
          Length = 135

 Score =  132 bits (333), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 72/134 (53%), Gaps = 1/134 (0%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           M    I + + D  R++ +L+   +        L  EL  A +  P+++P +VVTMNSRV
Sbjct: 1   MDTRAIYVTEDDLSRLEEILDTIPFRDRKDLQKLEDELASAMIVDPKDVPPNVVTMNSRV 60

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
           K R+L   +    +LV+P     +  ++S+++P+G A+LG   GD++   +    A  + 
Sbjct: 61  KLRDLRADKEMTISLVFPNDANIAEGKISILSPIGTAILGFGAGDTLDLAVRS-FAKKIR 119

Query: 121 VLELEYQPEAAGDY 134
           + E+ YQP AAG +
Sbjct: 120 IEEVLYQPGAAGSH 133


>UniRef50_A6X582 GreA/GreB family elongation factor n=3 Tax=Rhizobiales
           RepID=A6X582_OCHA4
          Length = 142

 Score =  132 bits (332), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 44/124 (35%), Positives = 72/124 (58%), Gaps = 1/124 (0%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
            +P I+++++D ER+  L    +     IA+ L  ELDRA++   + +P +V+ M S V+
Sbjct: 7   KKPNIVVSEIDYERLMGLATNVSERLEEIAEELMVELDRAKVVPAKRLPQNVIHMGSTVE 66

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           FR+ +DG+ R  TLVYP +   +  ++S++ P+G AL+GL  G SI W    G    L V
Sbjct: 67  FRS-NDGQERRVTLVYPGEADIAQGKISILTPIGTALIGLAPGQSISWTARDGKQHELNV 125

Query: 122 LELE 125
           L + 
Sbjct: 126 LSVS 129


>UniRef50_C0N448 Putative uncharacterized protein n=1 Tax=Methylophaga thiooxidans
           DMS010 RepID=C0N448_9GAMM
          Length = 137

 Score =  131 bits (331), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 41/135 (30%), Positives = 68/135 (50%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           + +P I +  LD  R++ L+        P+  +L  EL+RA++    ++P D+V+MNS V
Sbjct: 2   IHQPDIYVASLDLIRLEDLINTLWNKHSPVRLSLEDELERAKIIDSFQLPDDIVSMNSTV 61

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
           +            TLVYP  M    + LS+++P+G ALLG++ G+  +W    G      
Sbjct: 62  ELWVTKSDFPVYMTLVYPYGMKKDGSTLSILSPIGTALLGIKQGEEFYWPGRDGRNIKAR 121

Query: 121 VLELEYQPEAAGDYL 135
           +  + YQPE    Y 
Sbjct: 122 LENILYQPERERHYN 136


>UniRef50_C3X2V3 GreA/GreB family elongation factor n=2 Tax=Oxalobacter formigenes
           RepID=C3X2V3_OXAFO
          Length = 140

 Score =  131 bits (331), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 51/124 (41%), Positives = 73/124 (58%), Gaps = 1/124 (0%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
            RP I +   D ER++ +L    Y  +P    L  ELDRA +  PEE+P DV+T+NS  +
Sbjct: 13  ERPPITVTTHDYERLEQMLRNAKYRNIPGMADLQRELDRANVVEPEELPEDVITINSTAR 72

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           F +    +    TLVYP K    + ++SV+APVG+ALLGL  G SI W++PG     L V
Sbjct: 73  FIDDCTNDQYEITLVYPDKADGVS-KISVLAPVGSALLGLSAGQSIPWQVPGRQKLQLRV 131

Query: 122 LELE 125
           L+++
Sbjct: 132 LDVK 135


>UniRef50_A5F052 Regulator of nucleoside diphosphate kinase n=31 Tax=Vibrio
           RepID=A5F052_VIBC3
          Length = 135

 Score =  130 bits (328), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 60/131 (45%), Positives = 83/131 (63%), Gaps = 2/131 (1%)

Query: 5   TIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRN 64
           TI+++  D +RI  L++  A    P  + L  ELDRA +  P EMP DVVTMNS V+F+ 
Sbjct: 6   TIVVSTRDMDRISQLMDNLA-TLSPELEKLEEELDRATVLEPAEMPEDVVTMNSTVRFKF 64

Query: 65  LSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
           L   EV  +TLVYP  +  S   +S+ APVG+ALLGL VG  + W +PGG    LE++++
Sbjct: 65  LGSDEVMEKTLVYPNDVKSSAD-VSIFAPVGSALLGLAVGQQLAWPMPGGTLKTLEIIDI 123

Query: 125 EYQPEAAGDYL 135
            YQPE AG++ 
Sbjct: 124 VYQPERAGEFH 134


>UniRef50_D1SYS0 GreA/GreB family elongation factor n=1 Tax=Acidovorax avenae subsp.
           avenae ATCC 19860 RepID=D1SYS0_9BURK
          Length = 139

 Score =  129 bits (325), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 50/138 (36%), Positives = 69/138 (50%), Gaps = 9/138 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           +  P  ++ DLD  R+  L  +           L   L  A +     +  DVVTMNSRV
Sbjct: 5   LPHPERVLTDLDFARLSKLAARQLPPAS-----LADLLATADVTGSRAVDADVVTMNSRV 59

Query: 61  KFR----NLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVA 116
           +      + +DG  +V TL YP     +  ++SV++PVG +LLGLRVGD   W  P G  
Sbjct: 60  ELEGSGTDGADGARQVLTLCYPQDADAAAGRVSVLSPVGCSLLGLRVGDVAAWRTPQGED 119

Query: 117 THLEVLELEYQPEAAGDY 134
               V  + +QPEAAGDY
Sbjct: 120 CRATVAAILHQPEAAGDY 137


>UniRef50_A6GQE5 Nucleoside diphosphate kinase regulator n=1 Tax=Limnobacter sp.
           MED105 RepID=A6GQE5_9BURK
          Length = 122

 Score =  129 bits (324), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 48/128 (37%), Positives = 64/128 (50%), Gaps = 7/128 (5%)

Query: 8   INDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSD 67
           +N+LD  RI  L         P    LNA LD A+   P+++P DVVTMNS         
Sbjct: 1   MNELDLARISKL-------NAPFPPELNAALDNAEFIKPQDIPADVVTMNSLFTIVETES 53

Query: 68  GEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQ 127
           G      L YP+    +   +SV++PVGA+LLG + G    W  P G      V E+ +Q
Sbjct: 54  GSTNKLMLCYPSDAEPAKGYISVLSPVGASLLGRKAGTVAQWATPNGEQHFAVVKEILFQ 113

Query: 128 PEAAGDYL 135
           PEA+GDY 
Sbjct: 114 PEASGDYT 121


>UniRef50_B3PF63 Regulator of nucleoside diphosphate kinase n=1 Tax=Cellvibrio
           japonicus Ueda107 RepID=B3PF63_CELJU
          Length = 180

 Score =  128 bits (323), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 44/121 (36%), Positives = 77/121 (63%), Gaps = 3/121 (2%)

Query: 5   TIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRN 64
           +++I++ D +R+  L+E       P A+AL+ E+ RA + +  ++P DVV M+S V F +
Sbjct: 60  SLVISNSDYQRLVQLIE---DNDSPAAEALDIEIGRATLVADAQLPADVVAMDSEVTFED 116

Query: 65  LSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
           L  GE +   LV+PA+      ++S+++PVG+AL+GLR+G SI W +P G    L+V+ +
Sbjct: 117 LDSGEQKTIQLVFPAQANVDQLKISILSPVGSALIGLRIGSSIDWPVPQGKVRRLKVIAV 176

Query: 125 E 125
           +
Sbjct: 177 K 177


>UniRef50_A1TUC9 GreA/GreB family elongation factor n=4 Tax=Burkholderiales
           RepID=A1TUC9_ACIAC
          Length = 136

 Score =  127 bits (320), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 48/128 (37%), Positives = 70/128 (54%), Gaps = 5/128 (3%)

Query: 7   IINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLS 66
           ++ DLD  R+  L  Q      P   +L   L+ A + S   +  DVVTM SRV+  + +
Sbjct: 12  VLTDLDFARLSRLASQQ-----PAPPSLADLLENADVTSSRTVEADVVTMYSRVELVDTA 66

Query: 67  DGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
            G  +V T+ YP     +   +SV++PVG++LLGLRVG +  W  P G A    V  +++
Sbjct: 67  TGARQVLTICYPRDADLAAGFVSVLSPVGSSLLGLRVGQTARWCTPRGEACEATVAGIQH 126

Query: 127 QPEAAGDY 134
           QPEA GDY
Sbjct: 127 QPEAEGDY 134


>UniRef50_A5VGM9 GreA/GreB family elongation factor n=1 Tax=Sphingomonas wittichii
           RW1 RepID=A5VGM9_SPHWW
          Length = 137

 Score =  126 bits (316), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 42/130 (32%), Positives = 67/130 (51%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
            RP I + D +A+ +  L    A     ++  L  EL RA +   + +P D+VTM+S V+
Sbjct: 8   RRPPIHMIDSEADILADLATSAATRLPQVSQLLLEELGRATIHKADRIPGDIVTMHSVVQ 67

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           F + + G+     LVYP     +  ++S++ PVGA L+GLR G SI W    G    L +
Sbjct: 68  FTDAASGKEHRYQLVYPKDADIAEGRISILTPVGAGLIGLRAGQSILWPDRDGHERLLTI 127

Query: 122 LELEYQPEAA 131
            ++  +  AA
Sbjct: 128 AKVSRESLAA 137


>UniRef50_C6VSR5 GreA/GreB family elongation factor n=2 Tax=Sphingobacteriales
           RepID=C6VSR5_DYAFD
          Length = 134

 Score =  125 bits (314), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 31/125 (24%), Positives = 62/125 (49%), Gaps = 1/125 (0%)

Query: 5   TIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRN 64
            +I+   D + +    +           +L  EL+RA +    E+P   + +NS VK R 
Sbjct: 7   PVILGKDDFKLLKQFAQTFPDNNSSETMSLAYELNRAVVVEDNELPAGSIRLNSYVKVRE 66

Query: 65  LSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
            +  +    ++V P     +  ++S++ P+GAAL+GL  G+++ W++P G     ++L++
Sbjct: 67  TTTNKEMAFSIVMPKDADIAKQRISILTPMGAALIGLCKGETVEWKMPAG-IRRFKILDV 125

Query: 125 EYQPE 129
            Y  E
Sbjct: 126 WYDQE 130


>UniRef50_B8IFL5 GreA/GreB family elongation factor n=8 Tax=Methylobacterium
           RepID=B8IFL5_METNO
          Length = 141

 Score =  124 bits (312), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 44/123 (35%), Positives = 65/123 (52%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKF 62
           +P I +   D ER+  L          +A  L  ELDRAQ+ +        V M  +V+F
Sbjct: 14  KPRIKMTVEDHERLSALAAAAQDRMPDVASCLADELDRAQIVAGRGRLPPFVRMGCQVEF 73

Query: 63  RNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVL 122
           R+ + G V++ TLVYP +      ++SV+ P+GAAL+GL  G SI WE   G+   L VL
Sbjct: 74  RDDTTGRVQIVTLVYPGEANIEQGKISVLTPIGAALIGLSTGQSITWETRSGLTKSLTVL 133

Query: 123 ELE 125
           ++ 
Sbjct: 134 DVR 136


>UniRef50_B9KH08 Transcription elongation factor n=9 Tax=Rickettsiales
           RepID=B9KH08_ANAMF
          Length = 174

 Score =  124 bits (311), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 31/137 (22%), Positives = 54/137 (39%), Gaps = 12/137 (8%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIAD--------ALNAELDRAQMCSPEEMPHDV 53
            RP II +  DA  +  L E   Y                L ++  RA++    E+  D 
Sbjct: 37  ERPKIIKSISDARELGDLSENAEYHAARERQGLVESKIMELESKRSRAEVIDVSELSGDT 96

Query: 54  VTMNSRVKF----RNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHW 109
           V   + V             V    +V   +   S   +S+ +P+  +LLG R GDS+  
Sbjct: 97  VMFGATVTVSVYDEQTDSTGVMQYQIVGEYEADVSKNMISIKSPLVLSLLGRREGDSVEV 156

Query: 110 ELPGGVATHLEVLELEY 126
           + P G     +++++E+
Sbjct: 157 KTPRGDYKIYQIMKIEF 173


>UniRef50_Q3SU57 GreA/GreB family elongation factor n=9 Tax=Bradyrhizobiaceae
           RepID=Q3SU57_NITWN
          Length = 151

 Score =  123 bits (310), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 43/139 (30%), Positives = 66/139 (47%), Gaps = 11/139 (7%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPE----------EMPHDV 53
           P I I+  D +R+  L E         A+ L  E+DRA++   +              ++
Sbjct: 11  PAIAISAHDIDRLRHLAEAAIEKYPATAEFLAREIDRAEIIPADGSLLDDTRDQRWKVNL 70

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           VTM S V F +   G+ R  TLVYP        ++S+++P+GAAL+GL  G SI ++ P 
Sbjct: 71  VTMQSEVTFIDDVSGQKRRVTLVYPEDADVDAGKISILSPIGAALIGLSAGQSIEFQTPS 130

Query: 114 GVATHLEVLEL-EYQPEAA 131
           G    L V+ +  Y P   
Sbjct: 131 GGWRSLTVIAVWSYWPRPE 149


>UniRef50_A5V983 GreA/GreB family elongation factor n=1 Tax=Sphingomonas wittichii
           RW1 RepID=A5V983_SPHWW
          Length = 166

 Score =  123 bits (310), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 43/130 (33%), Positives = 66/130 (50%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
            RP I + D +AE +  +          +++ L  E+DRA +     +P DVVTM+S V+
Sbjct: 37  RRPAIHMIDSEAETLANMAVAAEERIPQVSELLLEEIDRATLYKAARIPADVVTMHSHVE 96

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           F + ++G  R   LVYP        ++S++  VGA L+GLR G SI W    G    L +
Sbjct: 97  FVDEANGTSRTVQLVYPKDADIDAGRVSILTLVGAGLIGLREGQSILWPGRDGHRRLLTI 156

Query: 122 LELEYQPEAA 131
             +  + EAA
Sbjct: 157 TRVSREAEAA 166


>UniRef50_Q5P744 Transcription elongation factor n=3 Tax=Proteobacteria
           RepID=Q5P744_AZOSE
          Length = 158

 Score =  122 bits (307), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 47/127 (37%), Positives = 69/127 (54%), Gaps = 9/127 (7%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           M+   +I+ D D  R+  +              L AEL+RA +  P+ +P  VVTM+SRV
Sbjct: 34  MNSEHLILTDNDFVRLMAM---------QPGPQLRAELERAVVVPPDFLPRHVVTMHSRV 84

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
           ++ + + GE R   +VYP +   +  ++SV APVGAALLGL V   I W+ P G    L 
Sbjct: 85  RYLDEASGEQREIQVVYPEEADVAAGKVSVFAPVGAALLGLSVDQVIEWDFPRGPRRRLR 144

Query: 121 VLELEYQ 127
           V E+ +Q
Sbjct: 145 VEEVLHQ 151


>UniRef50_P64276 Transcription elongation factor greA n=48 Tax=delta/epsilon
           subdivisions RepID=GREA_HELPJ
          Length = 164

 Score =  120 bits (302), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 32/136 (23%), Positives = 61/136 (44%), Gaps = 11/136 (8%)

Query: 1   MSRPTIIINDLDAER-IDILLEQPAYAGLPIADA--------LNAELDRAQMCSPEEMPH 51
           + RP I + ++D  R    L E   Y                L+  +  AQ+  P  + H
Sbjct: 24  VERPNI-VKEIDIARGHGDLKENAEYHAAKEKQRFIEARIVDLSEIVANAQVIDPSALAH 82

Query: 52  DVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWEL 111
           + V+  S +K  NL + +    T+V   +   +   +S  +P+  +L+G   GD++  +L
Sbjct: 83  NKVSFGSTIKILNLDNDKEFSYTIVGSVESDPAKGLISFGSPIAKSLIGKSKGDAVSIQL 142

Query: 112 PGGVATHLEVLELEYQ 127
           P G +   E+L++ Y+
Sbjct: 143 PNGES-DFEILDIYYK 157


>UniRef50_A8LN19 GreA/GreB family elongation factor n=8 Tax=Alphaproteobacteria
           RepID=A8LN19_DINSH
          Length = 148

 Score =  120 bits (302), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 47/132 (35%), Positives = 66/132 (50%), Gaps = 2/132 (1%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
            RP I+IN  D   I+ L E        +AD L  E+ RA++    +MP +V+ +     
Sbjct: 17  RRPRIVINADDLSHIEALAEGAMDRNPALADRLLEEIARARIVPAAKMPLNVIGIGKSAT 76

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           FR+ + G+ R  TLVYP     S  ++SVM P+G ALLGL  G   HW   G     L V
Sbjct: 77  FRDETTGQERTVTLVYPEDADISRARVSVMTPIGVALLGLAEGAVFHWNTRGEERRMLTV 136

Query: 122 LELEYQ--PEAA 131
           + +     PE+A
Sbjct: 137 IRVSDPAAPESA 148


>UniRef50_C6WYK0 GreA/GreB family elongation factor n=2 Tax=Methylophilaceae
           RepID=C6WYK0_METML
          Length = 125

 Score =  120 bits (301), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 42/125 (33%), Positives = 66/125 (52%), Gaps = 9/125 (7%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           M    +I++D D  R+ +L            + L  EL RA +   +++P DVV +NSRV
Sbjct: 2   MEIDKLILSDQDYARLSMLAND---------ELLGDELSRAIVVPADQVPADVVRINSRV 52

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
            + + S G  R   LV+P        ++SV++PVG+ALLGL+ G  I W  P G +  L+
Sbjct: 53  IYLDESSGLSREVELVFPEGADLKFGKISVLSPVGSALLGLKEGQVIDWPFPHGQSRRLK 112

Query: 121 VLELE 125
           V+ + 
Sbjct: 113 VVSVA 117


>UniRef50_A9EFF1 GreA/GreB family elongation factor n=1 Tax=Oceanibulbus indolifex
           HEL-45 RepID=A9EFF1_9RHOB
          Length = 146

 Score =  119 bits (300), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 44/125 (35%), Positives = 71/125 (56%), Gaps = 1/125 (0%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
             P +I+N  D   ++ L E   +    +AD    E+ RAQ+   ++MP DVV + S+V 
Sbjct: 14  RNPHLILNAADLVHLEELAEGMMHRHPTLADRFFEEIGRAQIVEDQQMPGDVVGIGSKVT 73

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATH-LE 120
           +R+ + G+ +  TLVYP     + +Q+SV+ P+G ALLGLR G S +W+       H L 
Sbjct: 74  YRDETTGQNKSVTLVYPEDADITRSQVSVITPIGVALLGLREGASFYWDTRRENQRHMLT 133

Query: 121 VLELE 125
           +L++E
Sbjct: 134 ILKVE 138


>UniRef50_A7IJH2 GreA/GreB family elongation factor n=4 Tax=Rhizobiales
           RepID=A7IJH2_XANP2
          Length = 143

 Score =  119 bits (300), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 45/126 (35%), Positives = 67/126 (53%), Gaps = 3/126 (2%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFR 63
           P ++++  D ER+  L          +A+ L AELDRA++     +P   V M S+V + 
Sbjct: 16  PALVLSHPDHERLAGLATAALDRIPDVAEELLAELDRARLVPIGRVPATAVQMGSKVTYE 75

Query: 64  NLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLE 123
             + G  R  TLVYP     +  ++SVM P+GAAL+GL  G SI W    G    L+V+E
Sbjct: 76  --AGGNARTVTLVYPEDADIAAARVSVMTPIGAALIGLSKGQSICWTARDGRRHELKVIE 133

Query: 124 LEYQPE 129
           ++  PE
Sbjct: 134 VQ-PPE 138


>UniRef50_B4RF21 Transcription elongation factor n=2 Tax=cellular organisms
           RepID=B4RF21_PHEZH
          Length = 214

 Score =  119 bits (300), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 42/126 (33%), Positives = 61/126 (48%), Gaps = 4/126 (3%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
             PT+ + + D +R+  L +       P A+ L  ELDRA +    E     V + S V+
Sbjct: 93  RTPTVRVAEADYDRLLNLAD----HDGPGAELLARELDRAIVVREGEKSRPFVRLGSTVE 148

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           +R+    +VR   LV P        +LSV++PVGAALLGL VGD+  W  P G    + V
Sbjct: 149 YRDRLTEKVRTVELVPPDAADIDANRLSVLSPVGAALLGLSVGDTFSWTAPDGRPRVVTV 208

Query: 122 LELEYQ 127
             +   
Sbjct: 209 EAVRRD 214


>UniRef50_A8HR94 Transcription elongation factor greA n=5 Tax=Proteobacteria
           RepID=GREA_AZOC5
          Length = 157

 Score =  119 bits (299), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 30/134 (22%), Positives = 55/134 (41%), Gaps = 9/134 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHD 52
           + RP II    +A     L E   Y                L  ++ RA++    ++  D
Sbjct: 24  VERPRIISAISEARAHGDLSENAEYHAAKELQSLNEGRIAELEDKISRAEVIDVSKLSGD 83

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
           +V   + V   +    E RV  +V  ++      ++S+ +PV  AL+G + G S+    P
Sbjct: 84  IVKFGATVTLVDEDTEEERVWQIVGDSEADAKAGRISISSPVARALIGKKKGSSVEVVTP 143

Query: 113 GGVATHLEVLELEY 126
            G     E++E+ +
Sbjct: 144 KGA-RSFEIVEVRW 156


>UniRef50_Q0A765 Transcription elongation factor greA n=23 Tax=Proteobacteria
           RepID=GREA_ALHEH
          Length = 158

 Score =  119 bits (298), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 30/135 (22%), Positives = 50/135 (37%), Gaps = 10/135 (7%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPH- 51
           + RP II    +A     L E   Y                +  +L  AQ+  P  +   
Sbjct: 24  VERPRIIQAIAEAREHGDLKENAEYHAAREQQSFVEGRIQEIEGKLSNAQVIDPAAVNAQ 83

Query: 52  DVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWEL 111
             V   + V   +   G+     +V   +       +SV +P+  AL+G   GD +  + 
Sbjct: 84  GKVIFGATVDLVDEDSGKEVTYQIVGEDEADIKQGLVSVNSPIARALIGKEEGDLVTVQA 143

Query: 112 PGGVATHLEVLELEY 126
           PGG     E++E+ Y
Sbjct: 144 PGGE-REYEIVEVRY 157


>UniRef50_B0T7C4 GreA/GreB family elongation factor n=1 Tax=Caulobacter sp. K31
           RepID=B0T7C4_CAUSK
          Length = 139

 Score =  118 bits (296), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 43/130 (33%), Positives = 70/130 (53%), Gaps = 1/130 (0%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           ++RP II+ + +A+R+  L  +   A    AD L  E++RA++ +  +MP  VV M S V
Sbjct: 8   VARPDIILAETEADRLSALATRLRDAAPQAADLLLEEIERAEIRADLDMPRTVVRMESVV 67

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
           +F + + G  R   LVYP     +  ++SV++ VGA L+GL    +I W    G    L 
Sbjct: 68  QFVDEAHGNPRTVLLVYPRDADIAAGKVSVLSFVGAGLIGLSPHQAIQWPDRNGRQRTLR 127

Query: 121 VLELEYQPEA 130
           +L++   PE 
Sbjct: 128 ILKVR-PPER 136


>UniRef50_Q98F06 Nucleoside diphosphate kinase regulator n=2 Tax=Mesorhizobium
           RepID=Q98F06_RHILO
          Length = 140

 Score =  117 bits (295), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 40/125 (32%), Positives = 60/125 (48%), Gaps = 3/125 (2%)

Query: 2   SRP--TIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSR 59
            RP   I+I+D D +R+  L           A+ L  E+DRA +     MP DVV M S 
Sbjct: 7   PRPSSRILISDTDHDRLTGLARALLDRAPETAEELLFEMDRAVVTDAAAMPADVVRMGSA 66

Query: 60  VKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHL 119
           V  R    G  +   LVYP +   +  ++SV+ P+G AL+G  +G ++ W   GG    +
Sbjct: 67  VTVR-GEGGATQRIMLVYPGEADIAENRISVLTPMGTALIGASIGQAVCWSSRGGRELSV 125

Query: 120 EVLEL 124
            V  +
Sbjct: 126 TVEAV 130


>UniRef50_A7HFE1 GreA/GreB family elongation factor n=1 Tax=Anaeromyxobacter sp.
           Fw109-5 RepID=A7HFE1_ANADF
          Length = 164

 Score =  117 bits (295), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 45/140 (32%), Positives = 71/140 (50%), Gaps = 8/140 (5%)

Query: 5   TIIINDLDAERIDILLEQPA--------YAGLPIADALNAELDRAQMCSPEEMPHDVVTM 56
            +++ + DA R+   L + +          G    + L   L  A +  P+ +P +VVTM
Sbjct: 25  RLLLTEQDAARLRATLARASLESMASADARGENAVELLATALRSAIVVPPDRIPAEVVTM 84

Query: 57  NSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVA 116
            SR+   +++ G  R   LVYP +       +SV++PVG ALLGL  G  + W LP G  
Sbjct: 85  RSRLVLEDVASGARREVVLVYPEEERTHEGHVSVLSPVGVALLGLSEGALVGWPLPSGRT 144

Query: 117 THLEVLELEYQPEAAGDYLL 136
             L+V  ++YQPEA  ++ L
Sbjct: 145 AVLQVESVQYQPEAVEEFHL 164


>UniRef50_B3E3H5 Transcription elongation factor greA n=19 Tax=Proteobacteria
           RepID=GREA_GEOLS
          Length = 158

 Score =  117 bits (294), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 30/134 (22%), Positives = 55/134 (41%), Gaps = 9/134 (6%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHDV 53
            RP +I +  +A     L E   Y                L  +L RA +     +  D 
Sbjct: 26  ERPKVIQDIAEARSHGDLSENAEYDAAKNRQGFIEGRIQELQGKLARAHVVDLTGLKPDK 85

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           V   + V   + +  E     +V   +      ++S  +PVG AL+G ++ DS+  ++P 
Sbjct: 86  VVFGATVTLYDTASEEEITYKIVGEDEADIKLGKISCTSPVGKALIGHKLDDSVKVKVPA 145

Query: 114 GVATHLEVLELEYQ 127
           G     E++E++Y+
Sbjct: 146 GT-KEYEIIEIKYE 158


>UniRef50_Q057J4 Transcription elongation factor greA n=20 Tax=Proteobacteria
           RepID=GREA_BUCCC
          Length = 159

 Score =  117 bits (293), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 30/135 (22%), Positives = 57/135 (42%), Gaps = 10/135 (7%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIAD--------ALNAELDRAQMCSPEEMP-H 51
           ++RP I+    +A ++  L E   Y                +  +L RAQ+    ++P  
Sbjct: 25  ITRPCIVKAIANARQLGDLKENAEYHSAREEQSFCENRICEIENKLLRAQIIDITKIPFK 84

Query: 52  DVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWEL 111
            +V   S V    +S   + V T+V   +       +S+ +P+  AL+G +  D I    
Sbjct: 85  GIVIFGSTVTVLQISTSNIFVYTIVGDDEANYKEFSISIHSPMSRALIGKKKNDIIKVNT 144

Query: 112 PGGVATHLEVLELEY 126
           P G   ++ + ++EY
Sbjct: 145 PTGYIKYI-IKKIEY 158


>UniRef50_Q1LSK1 Transcription elongation factor greA n=16 Tax=Proteobacteria
           RepID=GREA_BAUCH
          Length = 158

 Score =  117 bits (293), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 30/135 (22%), Positives = 56/135 (41%), Gaps = 10/135 (7%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEM-PH 51
           + RP II N  +A     L E   Y                + ++L  AQ+    ++ P 
Sbjct: 24  VRRPEIIRNIAEAREYGDLKENAEYHAAREQQGFCEGRIQEIESKLSHAQIIDVTKLFPS 83

Query: 52  DVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWEL 111
             V     V  +NL+  E +   +V   +    +  +S+ +P+   L+G + GD +  + 
Sbjct: 84  GKVVFGVTVSVQNLNINEEQTYRIVGDDEANFKHNLISISSPIARGLIGKKKGDIVLIKT 143

Query: 112 PGGVATHLEVLELEY 126
           P G     ++L++EY
Sbjct: 144 PRGE-VKYQILKIEY 157


>UniRef50_B2S6W5 Transcription elongation factor greA n=39 Tax=Bacteria
           RepID=GREA_BRUA1
          Length = 157

 Score =  116 bits (292), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 53/133 (39%), Gaps = 9/133 (6%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIAD--------ALNAELDRAQMCSPEEMPHDV 53
            RP II    +A     L E   Y     A          L   + RA++    ++  D 
Sbjct: 25  ERPRIIEAIAEARAHGDLSENAEYHAAKEAQSLNEGRINELEDLVARAEVIDVSKLTGDR 84

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           +   + V   +    E ++  +V   +      ++S+ +P+  AL+G   GD+I    PG
Sbjct: 85  IKFGATVTMIDEDTEEEKIYQIVGDQEADVKEGRISISSPIARALIGKGEGDTIEVNAPG 144

Query: 114 GVATHLEVLELEY 126
           G     E++ L++
Sbjct: 145 GS-RSYEIIALKF 156


>UniRef50_A1U1V6 GreA/GreB family elongation factor n=2 Tax=Marinobacter
           RepID=A1U1V6_MARAV
          Length = 128

 Score =  116 bits (291), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 53/125 (42%), Positives = 75/125 (60%), Gaps = 1/125 (0%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFR 63
           P I +++ D  R+  LLE+ A     +AD L  EL RA M    +MP  VVTMNSRV+F 
Sbjct: 5   PHITVSEEDYNRLSTLLERVAGQSD-VADGLEDELSRADMKPLADMPEGVVTMNSRVRFL 63

Query: 64  NLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLE 123
           N   GE     LVYP ++ D++ ++S++AP GAA+LGL +G SI W + G    HL+V+ 
Sbjct: 64  NEDTGEEHEVALVYPHEVGDADHKVSILAPAGAAMLGLSIGSSIEWPMKGRKPIHLKVIG 123

Query: 124 LEYQP 128
           +   P
Sbjct: 124 VTRNP 128


>UniRef50_B7L307 GreA/GreB family elongation factor n=1 Tax=Methylobacterium
           chloromethanicum CM4 RepID=B7L307_METC4
          Length = 147

 Score =  116 bits (291), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 47/131 (35%), Positives = 67/131 (51%), Gaps = 2/131 (1%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLP--IADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           RP +II   D   +  +      +     +   L  ELDRA +  P  +P  VVTM++RV
Sbjct: 10  RPPLIIPMSDFRFLREIAAGTGVSQARGSVVAWLAEELDRATVVPPGAVPPRVVTMHARV 69

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
           ++R+    +VR  TL YP +     + +SV+ PVGAAL+GL  G SI W  P G    L 
Sbjct: 70  EYRDDVTDQVRCVTLTYPGEEDAYASGISVLTPVGAALVGLSEGHSIRWRTPSGGLRGLT 129

Query: 121 VLELEYQPEAA 131
           VL + + P  A
Sbjct: 130 VLRVRFAPHHA 140


>UniRef50_Q4HT85 Transcription elongation factor n=1 Tax=Campylobacter upsaliensis
           RM3195 RepID=Q4HT85_CAMUP
          Length = 161

 Score =  116 bits (290), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 36/135 (26%), Positives = 56/135 (41%), Gaps = 11/135 (8%)

Query: 3   RPTIIINDLDAERI-DILLEQPAYAGLPIADALNA--------ELDRAQMCSPEEMPHDV 53
           RP +++ ++D  R    L E   Y       AL           L RAQ+  P    H+ 
Sbjct: 26  RPAVVV-EIDVARSHGDLKENAEYHAAREKQALIESRIAELGGILSRAQVIDPASYEHES 84

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           V   S V   +L   +    TLV   +       +S+ +P+  A+LG + GD     LP 
Sbjct: 85  VKFGSSVLIMDLESEKESKYTLVGTCESDLEKGYISIASPLARAMLGKKEGDEFKVRLPK 144

Query: 114 GVATHLEVLELEYQP 128
           G +   E+L + Y+P
Sbjct: 145 GES-EFEILSVTYEP 158


>UniRef50_Q7UVA0 Transcription elongation factor greA n=3 Tax=Planctomycetaceae
           RepID=GREA_RHOBA
          Length = 159

 Score =  116 bits (290), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 54/131 (41%), Gaps = 9/131 (6%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHDVVT 55
           P I+    +A     L E   Y              + L  ++ RA +     +P D V 
Sbjct: 28  PMIVQKIAEAREEGDLKENAEYHAQRENQGMLMAKINELRDKIARASIIDVSSLPKDEVV 87

Query: 56  MNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGV 115
               V   +++ G+    TLV        + ++ V +P G  L+G +VG++   ++P G 
Sbjct: 88  FGCTVTVEDVAYGDEEQFTLVGAGDEDYDSGKILVTSPFGQGLVGKKVGETAEVDVPAG- 146

Query: 116 ATHLEVLELEY 126
               ++L++E+
Sbjct: 147 KLKFKILKIEF 157


>UniRef50_D2R891 Transcription elongation factor GreA n=1 Tax=Pirellula staleyi DSM
           6068 RepID=D2R891_9PLAN
          Length = 164

 Score =  115 bits (289), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 34/132 (25%), Positives = 56/132 (42%), Gaps = 9/132 (6%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLPIADAL--------NAELDRAQMCSPEEMPHDVVT 55
           P I     DA     L E   Y     A  L          +L +A +  P  MP D V+
Sbjct: 28  PDITQKIADARAEGDLKENAEYHAQREAQGLLQAKINLIRNKLSKASIIDPSTMPRDQVS 87

Query: 56  MNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGV 115
             + V  +++   E    TLV   +   +  ++ + +P+G AL+G ++GD +    P G 
Sbjct: 88  FGTTVLVKDIDMDEEEEFTLVGAGEEDYNAGRILITSPLGQALVGKKIGDVVDVPAPKGS 147

Query: 116 ATHLEVLELEYQ 127
              LE+L L++ 
Sbjct: 148 YQ-LEILTLKFD 158


>UniRef50_Q1H282 GreA/GreB family elongation factor n=2 Tax=Proteobacteria
           RepID=Q1H282_METFK
          Length = 165

 Score =  115 bits (288), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 51/125 (40%), Gaps = 7/125 (5%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
            R  + +   D      L              L A L+ A +  P   P D V   + V+
Sbjct: 48  ERQPLTMRKDDPAVQQRLA-----MIDRDLRYLQARLESAIVVDPATQPTDTVLFGATVE 102

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
             +  +G      +V   +   +  ++S ++P+  AL+G ++GDS+ W  P G    LE+
Sbjct: 103 VED-ENGNSHTFMIVGEDEADIATNRVSWVSPLAKALIGQKIGDSVTWHRPAG-NLELEI 160

Query: 122 LELEY 126
           + + Y
Sbjct: 161 IAIHY 165


>UniRef50_C6XWY5 Transcription elongation factor GreA/GreB domain protein n=1
           Tax=Pedobacter heparinus DSM 2366 RepID=C6XWY5_PEDHD
          Length = 125

 Score =  114 bits (285), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 40/124 (32%), Positives = 65/124 (52%), Gaps = 2/124 (1%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           M   ++ ++  D + +   LE+   +     + L AEL  A + + EE+P DVV + S  
Sbjct: 1   METKSLSLSKSDFKLLKEHLEKSNMSAYNK-EKLQAELKAATIYTEEELPSDVVCLKSEA 59

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
           +  N+  G+     LV P +      ++SV AP+G AL G R GDSI+WE+P G     +
Sbjct: 60  RIANVKTGKEFTFKLVMPEEANIKAQKVSVFAPIGIALFGYRTGDSINWEMPDG-IQEFK 118

Query: 121 VLEL 124
           +LE+
Sbjct: 119 ILEV 122


>UniRef50_C0QKN0 Transcription elongation factor n=1 Tax=Desulfobacterium
           autotrophicum HRM2 RepID=C0QKN0_DESAH
          Length = 175

 Score =  114 bits (285), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 34/132 (25%), Positives = 54/132 (40%), Gaps = 9/132 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIAD--------ALNAELDRAQMCSPEEMPHD 52
           + RP  I     A     L E   +                L  ++  A++  P  +  D
Sbjct: 44  IERPQNIKAIEIARAHGDLSENAEFDAAKDRQSFIEGRIGELGYKIASAKIIDPATVSKD 103

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V   SRV   NL  GE     +V   +      ++SV +P+G ALLG + GD I  + P
Sbjct: 104 CVRFASRVVIENLDSGEEVEYMIVGQEESDIHKGKISVSSPLGMALLGKQPGDEIVIQAP 163

Query: 113 GGVATHLEVLEL 124
           GG   + E++++
Sbjct: 164 GG-KRNYEIVDI 174


>UniRef50_B0T793 GreA/GreB family elongation factor n=1 Tax=Caulobacter sp. K31
           RepID=B0T793_CAUSK
          Length = 141

 Score =  113 bits (284), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 38/123 (30%), Positives = 66/123 (53%), Gaps = 1/123 (0%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
           ++PTI + + D E +  L + PA         L  E+ RA +  P + P   V + SR+ 
Sbjct: 18  AQPTIYVTEQDFEILSNLADAPAGRAF-GGRVLAHEMARALIVEPGQAPLPFVRIGSRID 76

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           +R+LS+G+ R   L  P   +  + ++SV++PVGAAL+G+  G + HW    G    ++V
Sbjct: 77  YRDLSNGQTRSVRLSLPRDASIDDNRISVLSPVGAALVGMTAGQAFHWTDAEGRPRGVQV 136

Query: 122 LEL 124
           + +
Sbjct: 137 IAV 139


>UniRef50_Q7VM42 Transcription elongation factor greB n=27 Tax=Proteobacteria
           RepID=GREB_HAEDU
          Length = 162

 Score =  113 bits (284), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 50/134 (37%), Gaps = 10/134 (7%)

Query: 2   SRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMPHDV 53
            RP +  +  +A  +    E   Y                L+  L+  Q+          
Sbjct: 26  ERPKVTQSVSEAAALGDRSENAEYIYGKRRLREIDRRIRFLSKRLEALQIIDYHPQQAGK 85

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           V   + ++  N ++GE+    +V   +   +   +S+ +PV  AL+G  V D I  + P 
Sbjct: 86  VFFGAWIELEN-NEGEINQYRIVGCDEFDPTKNWISIDSPVARALIGKCVDDEIEVQTPT 144

Query: 114 GVATHLEVLELEYQ 127
           G A    + ++ Y 
Sbjct: 145 GKAVFY-INKIWYD 157


>UniRef50_A7HAZ2 GreA/GreB family elongation factor n=5 Tax=Myxococcaceae
           RepID=A7HAZ2_ANADF
          Length = 138

 Score =  113 bits (283), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 51/123 (41%), Positives = 70/123 (56%), Gaps = 3/123 (2%)

Query: 2   SRPTIIINDLDAERIDILLE-QPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           +R  I +   D +R+  L++   A      A+ L+AELDRA     E  P D+VTMN+RV
Sbjct: 3   ARKPIHVTHADLDRLRALVDQHLAGRDARAAEQLDAELDRA--VPIEVAPPDLVTMNARV 60

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
            F +L+ G  R   LVYP     +  ++SV+AP+GAALLGL VG+ I W LP G    L 
Sbjct: 61  AFVDLASGVRRELVLVYPRDADVAAGRVSVLAPIGAALLGLSVGEEIDWPLPDGRVARLR 120

Query: 121 VLE 123
           +L 
Sbjct: 121 ILS 123


>UniRef50_A6LPL4 Transcription elongation factor greA n=30 Tax=Clostridia
           RepID=GREA_CLOB8
          Length = 160

 Score =  113 bits (283), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 35/134 (26%), Positives = 56/134 (41%), Gaps = 9/134 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIAD--------ALNAELDRAQMCSPEEMPHD 52
           + R  I      A     L E   Y                L   L  A +    E+P D
Sbjct: 27  VKRKEITEKIKIALGYGDLSENSEYDEAKNDQAFTEGRIIQLENMLKNAVVVDESEIPSD 86

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
           +V++ S+VK ++    E    ++V  A+    N ++S  +PVG AL+G +VGD +   +P
Sbjct: 87  IVSVGSKVKVKDYEFDEEVEYSIVGSAEADPMNFKISNESPVGNALVGKKVGDVVEVTVP 146

Query: 113 GGVATHLEVLELEY 126
            GV    E+L +  
Sbjct: 147 DGVN-KFEILGISR 159


>UniRef50_A4BB58 Nucleoside diphosphate kinase regulator n=1 Tax=Reinekea blandensis
           MED297 RepID=A4BB58_9GAMM
          Length = 142

 Score =  112 bits (282), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 48/128 (37%), Positives = 74/128 (57%), Gaps = 3/128 (2%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
            +P + I++ D +R+  L+           D L +ELDRA +C P E+P D V + S V+
Sbjct: 4   PKPDVFISEHDWQRLQRLVAHYPDHEA--IDWLESELDRATVCLPNELPADAVQLGSVVR 61

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           F+  S G+V +R LV P +    +  +SV++PVG ALLGLRVGD I W    G +T + +
Sbjct: 62  FQLSSSGQVYLRELVLP-EQRQHDEHISVLSPVGMALLGLRVGDEIAWPSSPGQSTTVRI 120

Query: 122 LELEYQPE 129
           L+++   E
Sbjct: 121 LDVKQDRE 128


>UniRef50_Q2GA51 GreA/GreB family elongation factor n=1 Tax=Novosphingobium
           aromaticivorans DSM 12444 RepID=Q2GA51_NOVAD
          Length = 159

 Score =  112 bits (281), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 44/122 (36%), Positives = 69/122 (56%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKF 62
           RP II+ D +A+ +  L    +     I+  L  E+ RAQ+   +++P D V M S V+F
Sbjct: 30  RPQIILIDSEADALADLALAASDRLPEISRMLMEEIGRAQIVPAQDLPPDAVAMRSVVRF 89

Query: 63  RNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVL 122
           R+ + G VR  TLVYPA+   +  ++S++ PVGA L+GLR G SI W    G    + + 
Sbjct: 90  RDEATGAVRTVTLVYPAEADIAQDRVSILTPVGAGLIGLRAGQSIDWPNVRGKQRAITIE 149

Query: 123 EL 124
           ++
Sbjct: 150 QV 151


>UniRef50_Q725M4 Transcription elongation factor greA n=4 Tax=Desulfovibrionaceae
           RepID=GREA_DESVH
          Length = 163

 Score =  112 bits (281), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 33/133 (24%), Positives = 54/133 (40%), Gaps = 9/133 (6%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIAD-ALNAELDRAQ-------MCSPEEMPHDV 53
            RP +I    +A     L E   Y         L A +   +       +   + +  D 
Sbjct: 24  ERPGVIQAIKEAREEGDLSENAGYDAARERQGMLEARIKYIESRMAQFNVIDLDTISGDK 83

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           V   + VK  +L  GE +  TL+ P +   +   +SV +PV  A+LG   GD I  + P 
Sbjct: 84  VMFGATVKIEDLESGEEKEYTLLGPDEADYAKGSISVQSPVARAMLGKEEGDEIVVDAPR 143

Query: 114 GVATHLEVLELEY 126
           G   H E++ + +
Sbjct: 144 GKI-HYEIVSIRF 155


>UniRef50_A8F083 Transcription elongation factor greA n=13 Tax=Rickettsia
           RepID=GREA_RICCK
          Length = 162

 Score =  111 bits (279), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 51/135 (37%), Gaps = 9/135 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHD 52
           + R  I  +  +A     L E   Y                L     RA++    ++  D
Sbjct: 25  VERKKISEDIAEAREHGDLSENAEYEAAREKQAFIEGRIKELEDMAARAEIIDISKLSGD 84

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            +   + V   +    E     +V   +   +  ++S+ +P+  AL+G  VGD +    P
Sbjct: 85  NIKFGATVTLIDDDTEEKVTYIVVGEYEADITRKRVSIASPIAKALIGKSVGDFVEVTTP 144

Query: 113 GGVATHLEVLELEYQ 127
            G     EV+E+EY+
Sbjct: 145 KGS-KSYEVVEVEYK 158


>UniRef50_A3ESJ0 Transcription elongation factor n=4 Tax=Bacteria RepID=A3ESJ0_9BACT
          Length = 160

 Score =  111 bits (279), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 32/133 (24%), Positives = 53/133 (39%), Gaps = 9/133 (6%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHDVV 54
           RP  I +  +A     L E   Y                L A++  A + S     H  +
Sbjct: 26  RPKNIQDIAEARAHGDLSENAEYHAAKERQGFINSRIKELEAKIASAIVVSSAHQDHSRI 85

Query: 55  TMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGG 114
           T  + V+   L   E +  TLV   +      ++SV +PVG AL+G   G+++   +P G
Sbjct: 86  TFGATVRLVPLDSKEEKRYTLVGQEEADLKAGRISVHSPVGKALIGHSEGETVTIRVPAG 145

Query: 115 VATHLEVLELEYQ 127
                 + E+ Y+
Sbjct: 146 EVQ-YTIAEIFYE 157


>UniRef50_Q04EK0 Transcription elongation factor greA n=4 Tax=Bacilli
           RepID=GREA_OENOB
          Length = 162

 Score =  111 bits (278), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 31/132 (23%), Positives = 54/132 (40%), Gaps = 8/132 (6%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIAD--------ALNAELDRAQMCSPEEMPHDV 53
            RP I     +A     L E   Y                L   +  AQ+        +V
Sbjct: 28  KRPAITSRIQEARSFGDLSENSEYQSAKDEQAFVEGRVKQLQQMIQFAQVIDASSASKNV 87

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           VT+  ++ F+ + DG+    T+V  A+    + ++S  +P+G ALL  + GD +   LP 
Sbjct: 88  VTLGKKISFKEVPDGDEETYTIVGSAESDPLSGKISNDSPMGKALLDHKTGDKVEIPLPE 147

Query: 114 GVATHLEVLELE 125
             +  +E+L + 
Sbjct: 148 NHSVTVEILHVS 159


>UniRef50_C0A6F4 GreA/GreB family elongation factor n=1 Tax=Opitutaceae bacterium
           TAV2 RepID=C0A6F4_9BACT
          Length = 148

 Score =  111 bits (278), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 41/132 (31%), Positives = 64/132 (48%), Gaps = 8/132 (6%)

Query: 2   SRPTIIINDLDA----ERIDILLEQPAYAGLPIADALNAELDRAQMC-SPEEMPHDVVTM 56
            +  I I+  D      R++++ E            L AE DRA +      MP  VVT+
Sbjct: 3   EQQPIYISRADLLQIRARLNLIAEGR--HDRENLARLRAEFDRALIIEDDTAMPDGVVTL 60

Query: 57  NSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVA 116
           +  V+ ++L   E+   TL  P        ++S++AP+G ALLG +V + + WE+PGG  
Sbjct: 61  HCEVRLQDLDTNEIETYTLTLPEHADPEAHRISILAPIGTALLGYQVDNVVTWEMPGGA- 119

Query: 117 THLEVLELEYQP 128
             L +LE   QP
Sbjct: 120 RRLRILEARRQP 131


>UniRef50_Q930S2 Putative uncharacterized protein n=1 Tax=Sinorhizobium meliloti
           RepID=Q930S2_RHIME
          Length = 140

 Score =  111 bits (278), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 40/121 (33%), Positives = 58/121 (47%), Gaps = 1/121 (0%)

Query: 7   IINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLS 66
            I   D   +  L  Q       IA  L  +L+R  +   +++P DVV + S V    + 
Sbjct: 14  FIGATDYRLLSRLAYQALSRDFDIAAELIEKLERPCVLPDDQVPPDVVKIGSIVTCE-VE 72

Query: 67  DGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
           DG  R  +LVYP  +     ++SV+ PVG ALLGLR G ++ W    G   HL V+ +E 
Sbjct: 73  DGPCRTFSLVYPDDVDAEKGRISVLTPVGVALLGLRPGQAVEWFSRDGQRNHLIVVRVED 132

Query: 127 Q 127
            
Sbjct: 133 D 133


>UniRef50_B1ZU20 GreA/GreB family elongation factor n=1 Tax=Opitutus terrae PB90-1
           RepID=B1ZU20_OPITP
          Length = 143

 Score =  111 bits (278), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 35/131 (26%), Positives = 59/131 (45%), Gaps = 3/131 (2%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           M+   +  +  D  ++ +L    +  G P    L +EL R  +     +P   + + S V
Sbjct: 1   MNTSPLYFSIEDYTKLSLLATATSRPGTPS--QLRSELSRGVVVDATALPPTAIRLGSTV 58

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
           +  +L  GE+   TLV P +      +LSV+AP+G A++G   G  + W  PGG    L 
Sbjct: 59  EIEDLESGEIETYTLVLPEQANVDARKLSVLAPIGTAVIGCLQGAEVAWSTPGGT-RRLR 117

Query: 121 VLELEYQPEAA 131
           +  +    E A
Sbjct: 118 IGRVSPPAEPA 128


>UniRef50_Q0BZP7 Regulatory protein n=1 Tax=Hyphomonas neptunium ATCC 15444
           RepID=Q0BZP7_HYPNA
          Length = 128

 Score =  111 bits (277), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 45/126 (35%), Positives = 69/126 (54%), Gaps = 2/126 (1%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           ++RP I + D + ER+  L         P AD L  EL RA++ + E++P DVV M+ RV
Sbjct: 4   ITRPPIYVTDAELERLSDLA-HAVQGREPAADMLIEELSRARVTAVEDVPVDVVRMHDRV 62

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
            F           TLVYP +   ++ ++S++  VGA L+GL+VGD++ W    G    +E
Sbjct: 63  NFV-YDGARYEDFTLVYPYEANIADKRISILTQVGAMLIGLQVGDAMQWAGRDGRGHSME 121

Query: 121 VLELEY 126
           VLE+  
Sbjct: 122 VLEVSR 127


>UniRef50_Q8ZJH2 Transcription elongation factor greB n=165 Tax=Proteobacteria
           RepID=GREB_YERPE
          Length = 171

 Score =  110 bits (275), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 32/135 (23%), Positives = 56/135 (41%), Gaps = 10/135 (7%)

Query: 2   SRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMPHDV 53
            RP +     +A  +    E   Y                L   L+  ++  P+      
Sbjct: 26  ERPVVTQAVSEAAAMGDRSENAEYIYGKKRLREIDRRVRFLAKRLEVLKIVDPDPRQEGK 85

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           V   + V+  N  + E R+  LV P +   +   +S+ +PV  AL+G +V D +  + P 
Sbjct: 86  VFFGAWVRVENEQE-EQRIFRLVGPDEFDPAKKWISIDSPVARALIGKQVDDEVTVQTPN 144

Query: 114 GVATHLEVLELEYQP 128
           G AT+  +LE+ Y+P
Sbjct: 145 GEATYW-ILEIRYRP 158


>UniRef50_D0J9T5 Transcription elongation factor n=55 Tax=Bacteria
           RepID=D0J9T5_BLASP
          Length = 162

 Score =  110 bits (275), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 33/134 (24%), Positives = 61/134 (45%), Gaps = 8/134 (5%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADA--------LNAELDRAQMCSPEEMPHD 52
           + RP I +   +A     L E   Y  +  A          L  +L  A++    ++   
Sbjct: 27  IERPKISMQIAEARDKGDLSENAEYDAIKEAQEFLEMNIAKLKKKLSNARIIDGSQINRT 86

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V++ S V+ +NL+ G  ++ TLV   +    + ++S+  P+   LLG +VG   H +LP
Sbjct: 87  RVSILSTVRVKNLTYGGEQIYTLVPEGEADLKSGKISINTPISTGLLGKQVGQIAHIKLP 146

Query: 113 GGVATHLEVLELEY 126
             +    E+LE+ +
Sbjct: 147 NKMILDYEILEIAF 160


>UniRef50_B4UCU9 Transcription elongation factor greA n=588 Tax=Bacteria
           RepID=GREA_ANASK
          Length = 166

 Score =  109 bits (274), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 48/134 (35%), Gaps = 9/134 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHD 52
           + RP I+    +A     L E   Y                +   +  A++    +   D
Sbjct: 24  VERPKIVKEIAEARAHGDLSENAEYHAAKEKQSHIEGRIAQVEHWIASAEVIDVTKHAGD 83

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V   + V   +   G+     +V   +      ++SV +P+  AL+G   GD++    P
Sbjct: 84  RVVFGATVSLEDAESGDQVTYRIVGELEADLKQGKISVTSPIARALIGRSEGDTVVVRSP 143

Query: 113 GGVATHLEVLELEY 126
           GG     E+  + +
Sbjct: 144 GGE-KEYEIQSVAF 156


>UniRef50_Q97EB6 Transcription elongation factor greA n=6 Tax=Clostridiales
           RepID=GREA_CLOAB
          Length = 158

 Score =  109 bits (273), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 26/108 (24%), Positives = 50/108 (46%), Gaps = 1/108 (0%)

Query: 18  ILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVY 77
              +            +   L  A +    E+ +DVV++ S+V  ++    E    ++V 
Sbjct: 52  DEAKNDQAFVEGRIAQIENMLKNANVIDESELKNDVVSVGSKVMVKDYQFDEEIEFSIVG 111

Query: 78  PAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
            A+      ++S  +PVG+AL+G +VGD I   +P GV    ++L ++
Sbjct: 112 SAEADPIENKISNESPVGSALIGKKVGDEIEVNVPDGVD-KYKILAIK 158


>UniRef50_Q15Z69 GreA/GreB family elongation factor n=1 Tax=Pseudoalteromonas
           atlantica T6c RepID=Q15Z69_PSEA6
          Length = 128

 Score =  109 bits (273), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 38/124 (30%), Positives = 65/124 (52%), Gaps = 2/124 (1%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
            +P III+  D   ++  LE+          A+  ELDRA + + +++P +VV + S+V 
Sbjct: 3   KQPDIIISTADLAELEYQLERSKLPDDA-IRAIENELDRATIVACKDLPENVVAIGSQVT 61

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           F+ L   +V  + L  P         +SV AP+G+AL+GL  G  I W+   G    +E+
Sbjct: 62  FKILDSQKVFTKALCLPHDSVKFEDSISVFAPIGSALIGLSTGQCIKWQTQRG-QQSVEI 120

Query: 122 LELE 125
           +++E
Sbjct: 121 IKVE 124


>UniRef50_A5V3E1 Transcription elongation factor greA n=13 Tax=Proteobacteria
           RepID=GREA_SPHWW
          Length = 158

 Score =  109 bits (273), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 30/133 (22%), Positives = 52/133 (39%), Gaps = 10/133 (7%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHDV 53
            RP II    +A     L E   Y                +   L RAQ+  P  +  D 
Sbjct: 27  ERPLIIDAIEEARAHGDLSENAEYHAAKERQGQIEASIADIEDRLSRAQVIDPSMLSGDK 86

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           +   + V   +  D +     +V   +      ++S  +P+G AL+G +V D +   +P 
Sbjct: 87  IVFGATVTLLD-DDEKPVRYQIVGQTEADAKTGKISYNSPLGRALIGKKVDDEVEVTVPS 145

Query: 114 GVATHLEVLELEY 126
           G   +L V ++E+
Sbjct: 146 GDRFYL-VSKIEF 157


>UniRef50_A4CMB9 Nucleoside diphosphate kinase regulator n=1 Tax=Robiginitalea
           biformata HTCC2501 RepID=A4CMB9_9FLAO
          Length = 139

 Score =  109 bits (272), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 6/132 (4%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPI----ADALNAELDRAQMCSPEEMPHDVVTM 56
           M    ++I   +   +   +   A+            L  ELD A++    EM +DVV  
Sbjct: 1   MKYKQLLIEKKEYVLLKRYVNLSAHYHDATLWQSIQKLLTELDSAKIVDEAEMQNDVVRF 60

Query: 57  NSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVA 116
           +S +   +  +G  R   LV P +   S  ++S++ P+G AL G   GD++ WE P G  
Sbjct: 61  HSIITVTS-ENGWSRRVQLVLPPERDVSKDKISILTPMGIALFGYAEGDTVSWEFPSG-P 118

Query: 117 THLEVLELEYQP 128
             L + ++E +P
Sbjct: 119 KRLRIEKVEQEP 130


>UniRef50_D0LKY5 Transcription elongation factor n=1 Tax=Haliangium ochraceum DSM
           14365 RepID=D0LKY5_HALO1
          Length = 169

 Score =  108 bits (271), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 52/120 (43%), Gaps = 7/120 (5%)

Query: 9   NDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDG 68
            D DA + +                  A+L  +++  P ++  + V   + V   ++  G
Sbjct: 47  ADYDAAKEEQ------GMIEARIREYEAKLALSEVIDPTKLSGERVKFGATVTVEDIDTG 100

Query: 69  EVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQP 128
           +    T+V   +    N ++SV APV  AL+G  +GD    + P G     E++++++ P
Sbjct: 101 DEATYTIVGEHEADIKNKRISVTAPVARALIGKAIGDETQVQTPKGT-RAFEIVDVKWLP 159


>UniRef50_UPI00016C498C transcription elongation factor greA n=1 Tax=Gemmata obscuriglobus
           UQM 2246 RepID=UPI00016C498C
          Length = 161

 Score =  108 bits (270), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 29/121 (23%), Positives = 51/121 (42%), Gaps = 9/121 (7%)

Query: 13  AERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRN 64
           A  +  L E   Y              DAL+  L RA +     +P D V   S+V+  +
Sbjct: 38  ARDLGDLSENAEYHAAREDQGILQARIDALSDRLSRAVIVDTSNLPKDTVAFGSKVRVLD 97

Query: 65  LSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
           +   E     LV P +      ++   +P+G  L+G + GD++  ++P G     ++LE+
Sbjct: 98  VDVDEEETFELVSPGQENPDKGRILTGSPIGQGLIGRKKGDTVEIQVPSGTI-KFKILEI 156

Query: 125 E 125
            
Sbjct: 157 S 157


>UniRef50_C9RKD0 Transcription elongation factor n=1 Tax=Fibrobacter succinogenes
           subsp. succinogenes S85 RepID=C9RKD0_FIBSS
          Length = 151

 Score =  108 bits (270), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 32/132 (24%), Positives = 55/132 (41%), Gaps = 11/132 (8%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIA---------DALNAELDRAQMCSPEEMPH 51
           + RP ++   +DA     L E   Y                 L  +L RAQ+    +   
Sbjct: 20  VERPRVLQELVDARAQGDLSENAEYHAAKERLASIDNIEMPKLQDQLARAQVI-AFDANS 78

Query: 52  DVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWEL 111
           D +   + +  +NL      V  LV P +    N ++S  +P+GAAL+G + GD++    
Sbjct: 79  DTIKFGATITAKNLKTKREIVYQLVSPEEADALNGKISFKSPIGAALMGKKRGDTVEVVT 138

Query: 112 PGGVATHLEVLE 123
           P G     E+++
Sbjct: 139 PKGKNQ-FEIID 149


>UniRef50_Q2GD99 Transcription elongation factor greA n=2 Tax=Neorickettsia
           RepID=GREA_NEOSM
          Length = 159

 Score =  108 bits (270), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 52/132 (39%), Gaps = 9/132 (6%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHDVV 54
           +P+++     A  +  L E   Y                L   L  A++    +   + V
Sbjct: 26  KPSVVAAVAQARELGDLSENAEYHEARKEQSFVEGKIRELQLCLSEAEVIDVSQFTGERV 85

Query: 55  TMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGG 114
              + V   N+    V +  +V   +      ++SV +P+G A++   VG+ +  +LP G
Sbjct: 86  KFGASVTLENMESKSVLIYQIVGNLESDIKEGKISVSSPIGKAVMNKEVGEIVEIDLPSG 145

Query: 115 VATHLEVLELEY 126
                ++L +E+
Sbjct: 146 -KKTYKILGVEF 156


>UniRef50_Q9HZY5 Transcription elongation factor greB n=13 Tax=Gammaproteobacteria
           RepID=GREB_PSEAE
          Length = 168

 Score =  107 bits (269), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 49/136 (36%), Gaps = 10/136 (7%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMPHD 52
           + RP +     +A  +    E   Y                L   L+  ++        +
Sbjct: 33  VRRPQVTQAVSEAAALGDRSENAEYIYGKKMLREIDSRVRFLRKRLENLKVVGERPADPN 92

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V   + V   +   GE     +V P ++   N Q+S+ +P+  AL+G  +   +    P
Sbjct: 93  RVYFGAWVTLEDED-GEQARYRIVGPDELDLRNNQISIDSPLARALVGKELDAEVLVRTP 151

Query: 113 GGVATHLEVLELEYQP 128
            G      V+E+EY P
Sbjct: 152 AGEKLWF-VVEIEYPP 166


>UniRef50_A6EIL5 Nucleoside diphosphate kinase regulator protein, putative n=1
           Tax=Pedobacter sp. BAL39 RepID=A6EIL5_9SPHI
          Length = 129

 Score =  107 bits (269), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 35/121 (28%), Positives = 63/121 (52%), Gaps = 3/121 (2%)

Query: 5   TIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRN 64
            ++I   D + +     +       +  +L+AEL RA + S EE P D + +NS V+ ++
Sbjct: 8   QVVITADDYQLLKPYFTKTNPHAGEM--SLSAELSRAVILSNEEFPSDAIRLNSTVRIQD 65

Query: 65  LSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
            S GE+    +V P        ++SV+ P+ AAL+G R GD++ W++P G   +  + E+
Sbjct: 66  ESTGEIMELIIVLPQHANIKEKKISVLTPIAAALIGFRQGDAVQWKVPAG-LKNFRITEV 124

Query: 125 E 125
            
Sbjct: 125 A 125


>UniRef50_C4XLU8 Transcription elongation factor greA n=11 Tax=Desulfovibrionales
           RepID=GREA_DESMR
          Length = 164

 Score =  107 bits (268), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 34/139 (24%), Positives = 62/139 (44%), Gaps = 10/139 (7%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHDVVT 55
           P +I+   +A     L E   Y              + + + + R  +     +  + V 
Sbjct: 26  PGVILAIKEAREEGDLRENAGYEAARERQGMLEARINYIESRMSRFNVIDLATLGGEQVI 85

Query: 56  MNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGV 115
             + V+  ++  G+V+  TL+ P +   S   +S+++PVG ALLG  VGD I  + P G 
Sbjct: 86  FGATVEIEDVDTGDVKKYTLLGPDEAEPSKGSISLLSPVGLALLGKFVGDEIVVDAPRGK 145

Query: 116 ATHLEVLELEYQ-PEAAGD 133
             + E++ + +  P AA D
Sbjct: 146 I-NYEIVSIAFHGPIAAAD 163


>UniRef50_A9WK05 Transcription elongation factor greA n=6 Tax=Chloroflexi (class)
           RepID=GREA_CHLAA
          Length = 157

 Score =  107 bits (268), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 31/133 (23%), Positives = 52/133 (39%), Gaps = 9/133 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHD 52
           + R  I      A+ +  + E   Y                L   L RA++   ++  + 
Sbjct: 26  VERKQIAERIAAAKELGDISESGEYEDAKKAQALLEGRIRELKHLLSRAEVIDEDQASNG 85

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V + S V  R   DG     T+V  A+      ++S  +P+GAALLG R  + +    P
Sbjct: 86  EVRVGSSVTVRFEDDGTEETWTIVGSAEANPRQGRISNESPLGAALLGKRARNKVTVHTP 145

Query: 113 GGVATHLEVLELE 125
            G    L +L++ 
Sbjct: 146 SG-VMKLTILKVR 157


>UniRef50_D1B0C0 Transcription elongation factor n=4 Tax=Campylobacteraceae
           RepID=D1B0C0_SULD5
          Length = 167

 Score =  107 bits (267), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 48/134 (35%), Gaps = 10/134 (7%)

Query: 2   SRPTIIINDLDAERI-DILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHD 52
            +    + +LD  R    L E   Y                L+  + R+Q+  P    HD
Sbjct: 25  RQRPETVIELDIARSHGDLKENAEYHAAKEKLAFIDSRIAELSDLVSRSQVIDPSTYEHD 84

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V   S +   NL   E    ++V   +       +S  +P+   L+G  V + +  +LP
Sbjct: 85  KVRFGSTITLENLETNEEVTYSIVGSTESNPDLGLISYHSPLSKQLMGRCVDEEVMIKLP 144

Query: 113 GGVATHLEVLELEY 126
            G      +L + Y
Sbjct: 145 VGT-QEYAILNITY 157


>UniRef50_Q5QX12 Transcription elongation factor family protein n=1 Tax=Idiomarina
           loihiensis RepID=Q5QX12_IDILO
          Length = 129

 Score =  107 bits (267), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 44/124 (35%), Positives = 69/124 (55%), Gaps = 2/124 (1%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
           +RP I+I+ +D   I+  L++         D L  EL RA++  P  MP +V  +N +V 
Sbjct: 7   TRPNIVISCVDMAVIEHHLDETRLPRE-FLDELEVELARAKIVEPNVMPANVACLNRQVT 65

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           F+ L  G+V  +TL  P ++   +  LSV AP+GAAL+GL VG SI W+   G    +E+
Sbjct: 66  FKVLETGKVFTKTLTAPDQVDKYDDSLSVFAPLGAALIGLSVGQSIQWKTNRG-LQSVEI 124

Query: 122 LELE 125
           + + 
Sbjct: 125 VHVA 128


>UniRef50_A5FRA2 Transcription elongation factor n=3 Tax=Dehalococcoides
           RepID=A5FRA2_DEHSB
          Length = 266

 Score =  107 bits (267), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 28/119 (23%), Positives = 52/119 (43%), Gaps = 9/119 (7%)

Query: 17  DILLEQPAYAGLPIAD--------ALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDG 68
             + E   Y                +  EL  A++    +     V M + VK R+L +G
Sbjct: 149 KDMRENAPYHAAKEQRGQIEGRIKEIEHELKHAEVSEYTDNNTSKVNMGNTVKLRDLKNG 208

Query: 69  EVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQ 127
           E  + TLV P ++     ++S  +P+G AL     GD+I  E+P G   ++ + ++ ++
Sbjct: 209 EQCIYTLVSPKEIEPLKGRISASSPIGKALFNRSKGDNIEIEVPSGTLQYV-IEDISFK 266


>UniRef50_Q88DU7 Transcription elongation factor greA n=83 Tax=Proteobacteria
           RepID=GREA_PSEPK
          Length = 160

 Score =  106 bits (266), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 47/134 (35%), Gaps = 10/134 (7%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMP-HD 52
            RP +     +A  +  L E   Y                +   L  + +     +P   
Sbjct: 27  ERPRLSQAIGEARELGDLKENAEYHAAREEQGMVEARIRDIEGRLQNSVVIDVTTIPHTG 86

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V   + V   N    E     +V   +      +LS  AP+  A++G   GD++  + P
Sbjct: 87  KVIFGTTVVLANTETDEEVTYQIVGEDEADVKQGKLSSGAPIARAIIGKEEGDTVVVKTP 146

Query: 113 GGVATHLEVLELEY 126
            G     E++E+++
Sbjct: 147 SGT-VEYEIVEVKH 159


>UniRef50_B1MX52 Transcription elongation factor greA n=11 Tax=Firmicutes
           RepID=GREA_LEUCK
          Length = 160

 Score =  106 bits (266), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 33/131 (25%), Positives = 53/131 (40%), Gaps = 8/131 (6%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLPIADA--------LNAELDRAQMCSPEEMPHDVV 54
           RP I      A     L E   Y       A        L   ++ A++  P     DVV
Sbjct: 29  RPEITNRIQIARSYGDLSENSEYQSAKDEQAFVEGRILTLKKMIENAEIIDPNATAADVV 88

Query: 55  TMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGG 114
           ++   V F+ L D E     +V   +      ++S  + +  ALL  +VGD +   LP G
Sbjct: 89  SLGKTVTFKELPDEEPETYAIVGSTESDPLAGKISNESAMAVALLDKKVGDKVSVPLPSG 148

Query: 115 VATHLEVLELE 125
            +  +E+L++E
Sbjct: 149 ESIDVEILKVE 159


>UniRef50_Q1H0G6 GreA/GreB family elongation factor n=3 Tax=Proteobacteria
           RepID=Q1H0G6_METFK
          Length = 165

 Score =  106 bits (266), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 44/112 (39%), Gaps = 2/112 (1%)

Query: 22  QPAYAGLPIADALNAELDRAQMCSPEEMPH-DVVTMNSRVKFRNLSDGEVRVRTLVYPAK 80
           +           L   +D A +  P +    + +   + V+  ++         +V   +
Sbjct: 55  KRLRQIDSRLRFLMKRMDIAVVVDPAQQQDLEKIYFGAWVELYSIDKDSEHHYRIVGQDE 114

Query: 81  MTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQPEAAG 132
           +      +S ++P+  ALLG + GD I  E P G     E++++ Y P   G
Sbjct: 115 LDPGKGYISWISPLARALLGKQPGDVIRVETPAGEER-FEIVDVSYHPPGQG 165


>UniRef50_D1B632 Transcription elongation factor n=4 Tax=Synergistaceae
           RepID=D1B632_THEAS
          Length = 164

 Score =  106 bits (266), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 25/122 (20%), Positives = 48/122 (39%), Gaps = 9/122 (7%)

Query: 12  DAERIDILLEQPAYAGLPIADA--------LNAELDRAQMCSPEEMPHDVVTMNSRVKFR 63
           +A     L E   Y                L  +L +A++    ++    V++ + V+ R
Sbjct: 42  EARAFGDLSENAEYHAAKEEQEKLESRIMWLEYQLSKAKVVESSDIDTSTVSLGATVQLR 101

Query: 64  NLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLE 123
           +L  G      LV   +      ++S  +PVG A++G   G+ +   +P G   HL +  
Sbjct: 102 DLDTGNTYTYVLVGSEEADPKANRISAQSPVGKAIIGRAEGEEVIVRVPKGT-RHLRIER 160

Query: 124 LE 125
           + 
Sbjct: 161 IS 162


>UniRef50_UPI0001C3129D transcription elongation factor GreA n=1 Tax=Conexibacter woesei
           DSM 14684 RepID=UPI0001C3129D
          Length = 161

 Score =  106 bits (265), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 51/131 (38%), Gaps = 8/131 (6%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHDV 53
            R  +     +A     + E   Y                L  +L  A +     +  DV
Sbjct: 26  KRREVAARIKEAREFGDISENAEYDDAKNEQAMLESKIAQLEEKLRAATVIDSRSVGTDV 85

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           V + S V+  +   G+     +V  A+   +  +LS  +PVG AL+G + G++   +LP 
Sbjct: 86  VGIGSSVQVADSQSGKSDTYVIVGSAEANPAERKLSNESPVGKALIGRKAGETATVQLPN 145

Query: 114 GVATHLEVLEL 124
           G    L + ++
Sbjct: 146 GKQRELRITKI 156


>UniRef50_Q2LR03 Transcription elongation factor greA n=1 Tax=Syntrophus
           aciditrophicus SB RepID=GREA_SYNAS
          Length = 161

 Score =  106 bits (265), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 31/130 (23%), Positives = 52/130 (40%), Gaps = 10/130 (7%)

Query: 8   INDLDAERI-DILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHDVVTMNS 58
           I D++  R    L E   Y                L   L  + +   + +  D +   +
Sbjct: 30  IKDIEIARAHGDLSENAEYTAAKEKQSFLHGKLQELENNLALSNVIDLKMLSDDRIVFGA 89

Query: 59  RVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATH 118
            V     S G+     LV P +   S  ++SV +P+G AL+G  +GD +    PGG   +
Sbjct: 90  TVIIEEASTGKQTNYQLVGPFESNISENKISVTSPIGKALIGKSIGDEVKVHTPGG-IRN 148

Query: 119 LEVLELEYQP 128
            EV+++   P
Sbjct: 149 FEVVDIYINP 158


>UniRef50_A7HDS3 Transcription elongation factor GreB n=3 Tax=Myxococcales
           RepID=A7HDS3_ANADF
          Length = 169

 Score =  106 bits (265), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 34/136 (25%), Positives = 55/136 (40%), Gaps = 10/136 (7%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMPHD 52
           + RP I+     A  +    E   Y                L+  +D   +  P   PH 
Sbjct: 32  VDRPKIVAEVEAAAALGDRSENAEYVYGKKKLRELDRRLRFLSERMDALTVVDPRPHPHG 91

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
                + V   +  +GE R   LV P +   +   +SV AP+G ALLG + GD++ +  P
Sbjct: 92  RAFFGAWVTIED-DEGEARTFRLVGPDEFDVAAGLISVEAPLGRALLGKQEGDTVLFLRP 150

Query: 113 GGVATHLEVLELEYQP 128
            G A  L ++ + + P
Sbjct: 151 AGEA-ELTIMAVRWSP 165


>UniRef50_A0AIU5 Transcription elongation factor greA n=99 Tax=Bacteria
           RepID=GREA_LISW6
          Length = 160

 Score =  106 bits (265), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 54/132 (40%), Gaps = 9/132 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADA--------LNAELDRAQMCSPEEMPHD 52
           + R  ++     A     L E   Y       A        +   +  AQ+    E  + 
Sbjct: 27  VKRKEVVERIKIARSFGDLSENSEYDSAKDEQAFVEGRITTIENMIRNAQIIDAAEAHNG 86

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
           +VT+ + V F  L DGE    T+V  A+      ++S  +P+   LLG + G+ +  + P
Sbjct: 87  LVTLGNTVTFIELPDGEEETYTIVGSAEADPFEGKISNDSPIAKGLLGHKEGEEVTIQTP 146

Query: 113 GGVATHLEVLEL 124
            G   ++++ ++
Sbjct: 147 AG-DMNVKIEKI 157


>UniRef50_A0LZA7 Transcription elongation factor n=1 Tax=Gramella forsetii KT0803
           RepID=A0LZA7_GRAFK
          Length = 146

 Score =  105 bits (263), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 36/129 (27%), Positives = 60/129 (46%), Gaps = 6/129 (4%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGL----PIADALNAELDRAQMCSPEEMPHDVVTM 56
           M    +II   + + +  ++    Y            LN EL  A++ +  EMP DV+ +
Sbjct: 1   MRYGELIIEKKEYDFLKQIMSLAKYHKDTSYKASIYKLNEELKDARILTNSEMPLDVIRL 60

Query: 57  NSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVA 116
           NS V          R   +V P K      ++SV+AP+G AL G   GD+I W  P G +
Sbjct: 61  NSLVTIE-TPYAVERTYQIVTPEKGDIRKNKISVLAPMGLALFGYAQGDNITWTFPLGES 119

Query: 117 THLEVLELE 125
            ++++ E++
Sbjct: 120 -YIKIKEVK 127


>UniRef50_C7GYY1 Transcription elongation factor n=1 Tax=Eubacterium saphenum ATCC
           49989 RepID=C7GYY1_9FIRM
          Length = 158

 Score =  105 bits (263), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 49/117 (41%), Gaps = 6/117 (5%)

Query: 9   NDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDG 68
           ++ DA + +                L   L+  ++        DVV +   V  +N++  
Sbjct: 47  SEYDAAKNEQ------AELEERISVLEDMLNNYEIIDSNAAKGDVVDLGLNVHLKNITKK 100

Query: 69  EVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
           +     +V  A+    N  +S  +P+G  LL  +VG+++  ++P G     ++L++ 
Sbjct: 101 KEETYRIVGSAEADPFNNLISNESPIGKGLLKHKVGETVSIDIPSGKTVKYKILKIS 157


>UniRef50_A5FHU8 GreA/GreB family elongation factor n=1 Tax=Flavobacterium
           johnsoniae UW101 RepID=A5FHU8_FLAJ1
          Length = 132

 Score =  105 bits (262), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 31/123 (25%), Positives = 61/123 (49%), Gaps = 2/123 (1%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
             PT   +D    R +++L+         A+ L+ ELDRA +    E+   V+ +NS V 
Sbjct: 3   PTPTFCKSDYQFLR-ELILKSKNSTNTKEANQLSQELDRAVISKESELDSSVIRINSLVT 61

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
             ++   +     +V P+      +++S++AP+  A++G +  D + WELP G    L++
Sbjct: 62  IEDVKANKQMKIQIVLPSYADVKQSKISILAPLSVAIIGFKENDEVDWELPAG-IKTLKI 120

Query: 122 LEL 124
           + +
Sbjct: 121 VAV 123


>UniRef50_C6WVB7 GreA/GreB family elongation factor n=2 Tax=Methylophilaceae
           RepID=C6WVB7_METML
          Length = 168

 Score =  104 bits (260), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 55/122 (45%), Gaps = 7/122 (5%)

Query: 11  LDAERIDILLEQPAYAG-----LPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNL 65
            +  R+ +  +                 + A LD A +  P +  H+ V   + ++  + 
Sbjct: 48  AELNRLKLTADDTFAKDKVAEIERDLRYVRARLDSAILVDPTKQSHETVLFGATIEVED- 106

Query: 66  SDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
             G      +V   +   S  ++S ++P+  +LLG +VGD++ W+ P G   +LE+L++ 
Sbjct: 107 GAGAQHTFHIVGEDEADASINKVSWVSPLAKSLLGQKVGDTVTWQRPAG-NINLEILDIH 165

Query: 126 YQ 127
           YQ
Sbjct: 166 YQ 167


>UniRef50_A0LK20 Transcription elongation factor greA n=1 Tax=Syntrophobacter
           fumaroxidans MPOB RepID=GREA_SYNFM
          Length = 156

 Score =  104 bits (259), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 31/132 (23%), Positives = 53/132 (40%), Gaps = 9/132 (6%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHDV 53
            RP +I    +A     + E   Y                L  ++   ++  P +  +  
Sbjct: 25  ERPMVIRAIEEARSHGDISENAEYEAAKEKQAMIEGRIQDLCQKMGECEIVEPSDNDNGR 84

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
               S V   +   GEV    LV P +    +  +SV++P+G AL+G   G+ I  + P 
Sbjct: 85  AIFGSTVVVEDTETGEVTSYRLVGPYEADVQSGTISVVSPLGKALIGKEEGEEIRVQTPK 144

Query: 114 GVATHLEVLELE 125
           G   ++EVLE+ 
Sbjct: 145 G-VRNIEVLEIR 155


>UniRef50_C9RNS9 GreA/GreB family elongation factor n=1 Tax=Fibrobacter succinogenes
           subsp. succinogenes S85 RepID=C9RNS9_FIBSS
          Length = 169

 Score =  103 bits (258), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 29/134 (21%), Positives = 53/134 (39%), Gaps = 9/134 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMPHD 52
           + RP +I     A       E  AY                L+  LD AQ+         
Sbjct: 37  VERPAMINQVQAAAAEGDRSENAAYTYGRMRVREIDRRLRELDRILDGAQIVENAATKDG 96

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            +   + VK  +      ++ ++V   ++     ++S+ +P+G AL G + GD++  + P
Sbjct: 97  SIRFGATVKMIDKKTKREKIYSIVGDKEIDPLQGRISMKSPIGEALQGKKAGDTVEVQAP 156

Query: 113 GGVATHLEVLELEY 126
            G     E+LE+ Y
Sbjct: 157 RGKIV-YEILEVNY 169


>UniRef50_A3PS97 GreA/GreB family elongation factor n=4 Tax=Rhodobacter sphaeroides
           RepID=A3PS97_RHOS1
          Length = 137

 Score =  103 bits (258), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 40/127 (31%), Positives = 61/127 (48%), Gaps = 2/127 (1%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
           SRP I +  ++  R+D L          +A  L  +L  A++ +P  +  DVVT+ S V 
Sbjct: 8   SRPAIDMTLIE--RLDTLAGAAIARLPDVAYPLITKLTSARLLAPARLSSDVVTIGSEVL 65

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           + +      R  TL +P     S   +S++ PVG ALLGL  GD   W+   G    L V
Sbjct: 66  YHDDQGARDRRVTLSWPEDADISRRSVSILTPVGVALLGLSAGDRFQWQTRAGERRSLTV 125

Query: 122 LELEYQP 128
           L++  +P
Sbjct: 126 LQVGSEP 132


>UniRef50_Q98F07 Nucleoside diphosphate kinase regulator; Rnk n=2 Tax=Mesorhizobium
           RepID=Q98F07_RHILO
          Length = 180

 Score =  103 bits (257), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 38/132 (28%), Positives = 60/132 (45%), Gaps = 1/132 (0%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           M      +   D   ++++LE+      PI   L  +L  A +   + +  D+VT+NSRV
Sbjct: 1   MKSTNCCLTTKDRAVLEVMLERRRAFADPIVHVLEHKLSSADVVPIDTVGPDIVTLNSRV 60

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
            F ++  G  + RTLV         + LSV    G  +LG+  G +   E   G    + 
Sbjct: 61  VF-SIDAGHAQTRTLVQNEVRGPVGSSLSVATRRGLCMLGMAQGQTASIEHADGRRESIL 119

Query: 121 VLELEYQPEAAG 132
           +  + YQPEAAG
Sbjct: 120 IKAVLYQPEAAG 131


>UniRef50_A7HXN2 GreA/GreB family elongation factor n=1 Tax=Parvibaculum
           lavamentivorans DS-1 RepID=A7HXN2_PARL1
          Length = 133

 Score =  103 bits (257), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 42/122 (34%), Positives = 66/122 (54%), Gaps = 1/122 (0%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFR 63
           P I++ +   + +  + E        +A  L+ EL+RA++     +P DVV +NS V+F 
Sbjct: 10  PQIVVAEEQFDALSDIAEGLTGVLPHVAGFLDRELNRARLLPLAHVPSDVVKVNSTVEFT 69

Query: 64  NLSDGE-VRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVL 122
             + GE V    L +PA+ T  +  +S+ +PVG ALLGLR G SI W    G    L+VL
Sbjct: 70  LDTRGERVERLKLAFPAESTAGDGYVSIASPVGVALLGLREGQSIEWTSRYGERRSLKVL 129

Query: 123 EL 124
           ++
Sbjct: 130 KV 131


>UniRef50_Q096W9 Transcription elongation factor GreB n=1 Tax=Stigmatella aurantiaca
           DW4/3-1 RepID=Q096W9_STIAU
          Length = 144

 Score =  102 bits (256), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 30/135 (22%), Positives = 47/135 (34%), Gaps = 11/135 (8%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEE-MPH 51
           + RP +      A       E   Y                L   LD A + +P E    
Sbjct: 11  VERPKVTAEVSAAAAQGDRSENAEYIYGKKRLREIDRRIRFLQKRLDTATIVTPAEQTDQ 70

Query: 52  DVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWEL 111
             V   + V   +   G      +V   ++     ++SV +P+G ALL   VGDS+    
Sbjct: 71  GRVYFGATVTLEDED-GVQTTYQIVGSDEIDTQGGRISVESPIGKALLRKAVGDSVEVMR 129

Query: 112 PGGVATHLEVLELEY 126
           P G    L ++ + Y
Sbjct: 130 PRGEI-ELTIVAIAY 143


>UniRef50_B4W8F1 Putative uncharacterized protein n=1 Tax=Brevundimonas sp. BAL3
           RepID=B4W8F1_9CAUL
          Length = 141

 Score =  102 bits (256), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 37/131 (28%), Positives = 62/131 (47%), Gaps = 3/131 (2%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
           SRP I ++  D + +  L+      G  +A  L  EL+RA +C P + P     ++  + 
Sbjct: 12  SRPDIFLSARDHQTLSRLVGDMPAEG--VAGLLQEELERAVICEPGDRPRGAAPLHRWLH 69

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           + +    + R   +V P +      ++SV++ VGA L+GL  G +I W  P G    L  
Sbjct: 70  YVDGRSPQPRRIQIVLPNEADIDAGKVSVLSYVGAGLIGLVEGHTIAWTDPSGADRRLTP 129

Query: 122 LELEYQPEAAG 132
           + +E  PE  G
Sbjct: 130 VMIE-DPETPG 139


>UniRef50_Q67JL1 Transcription elongation factor n=2 Tax=Clostridiales
           RepID=Q67JL1_SYMTH
          Length = 157

 Score =  102 bits (255), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 29/121 (23%), Positives = 51/121 (42%), Gaps = 9/121 (7%)

Query: 13  AERIDILLEQPAYAGLPIADA--------LNAELDRAQMCSPEEMPHDVVTMNSRVKFRN 64
           A     + E   Y       A        L   L  A++        +VV + S V  R+
Sbjct: 38  AREYGDISENSEYEDAKNEQAFIEGRILVLEKMLRNARVIDEPVGQQEVVVLGSTVVLRD 97

Query: 65  LSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
           L  G+    T+V   +   ++ ++S  +PVG A++G RVG  +  + P GV    E++ +
Sbjct: 98  LEYGDEHTYTIVGTTEADPAHNRISNESPVGRAIMGQRVGTVVAVDAPDGVF-KYEIVAI 156

Query: 125 E 125
           +
Sbjct: 157 K 157


>UniRef50_A8SDG2 Transcription elongation factor n=2 Tax=Clostridiales
           RepID=A8SDG2_9FIRM
          Length = 161

 Score =  102 bits (254), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 41/109 (37%)

Query: 18  ILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVY 77
              +            L   +  A +    E+  D V++ + V  R   + E     +V 
Sbjct: 50  DEAKNTQGLVENRITELEQTIKNAVIIDESELSVDNVSVGTHVTIRETGEDEAEEYDIVG 109

Query: 78  PAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
             +    N ++S  +PVG AL+G  VGD     LP G      VL + +
Sbjct: 110 RTEADAFNGKISDESPVGHALMGKAVGDKAEVLLPTGQTVVYTVLAITH 158


>UniRef50_C9KJ19 Transcription elongation factor n=1 Tax=Mitsuokella multacida DSM
           20544 RepID=C9KJ19_9FIRM
          Length = 156

 Score =  102 bits (254), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 47/118 (39%), Gaps = 11/118 (9%)

Query: 16  IDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSD 67
           +  L E   Y                L A++  + +        DVV M S+V  +++  
Sbjct: 41  LGDLSENSEYDDAKNEQAFLEGEIQDLTAKIRNSHIIKAGA--GDVVQMGSKVTVKDIEF 98

Query: 68  GEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
           G+     LV   +      ++S  +P+G ALLG + G  I    P G     E+L+++
Sbjct: 99  GDEETFMLVGSTEADPDEGKISNESPLGQALLGQKSGSVIDVHAPAG-IIKYEILDIK 155


>UniRef50_C7CFG6 Putative regulator n=1 Tax=Methylobacterium extorquens DM4
           RepID=C7CFG6_METED
          Length = 149

 Score =  101 bits (253), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 42/122 (34%), Positives = 62/122 (50%), Gaps = 1/122 (0%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFR 63
           P I +   D +R+          G   AD L  EL RA +C P  +P +VV++N RV +R
Sbjct: 8   PPITVTTRDFDRLVAFSLDAHLRGDSHADFLLWELKRATLCPPCALPSEVVSVNCRVLYR 67

Query: 64  NLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHW-ELPGGVATHLEVL 122
              +  VRV  L +P  + +    LSV +P+G ALLGLRVGD + + +   G    + V 
Sbjct: 68  LDDEPGVRVHLLAHPDDLINLADGLSVASPLGTALLGLRVGDRMPFCDNRLGTQHVVTVE 127

Query: 123 EL 124
            +
Sbjct: 128 GI 129


>UniRef50_C0QWD9 Transcription elongation factor n=2 Tax=Brachyspira
           RepID=C0QWD9_BRAHW
          Length = 154

 Score =  101 bits (252), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 32/130 (24%), Positives = 55/130 (42%), Gaps = 12/130 (9%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHDVVT 55
           P II    +A     L E   Y                L ++L   ++  P  +  D VT
Sbjct: 28  PAII---AEAREKGDLKENAEYHAAKEKQGLLNAQISKLESDLAGCEIIDPANLDKDTVT 84

Query: 56  MNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGV 115
              RVK ++ S   V    +V   +   S  +++++ P+   LLG ++GD +  ++P G 
Sbjct: 85  FGKRVKVKDKSRNAVFEYRIVGELEADMSKNEITIVTPIAKGLLGKKIGDVVTIKVPAG- 143

Query: 116 ATHLEVLELE 125
              LE+LE+ 
Sbjct: 144 DKVLEILEIS 153


>UniRef50_Q817Z6 Transcription elongation factor greA n=141 Tax=cellular organisms
           RepID=GREA_BACCR
          Length = 158

 Score =  101 bits (252), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 52/117 (44%), Gaps = 7/117 (5%)

Query: 9   NDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDG 68
           ++ DA + +    +           L   +  A +         VVT+   V F+ L +G
Sbjct: 49  SEYDAAKDEQAFVEGR------ITQLENMIRNAVIIKDTGEVSTVVTLGKTVTFKELPNG 102

Query: 69  EVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
           +    T+V  A+      ++S  +P+  +LLG ++G+ +  + PGG    +E++ ++
Sbjct: 103 DEEAYTIVGSAEADPFEGRISNDSPIAKSLLGKQIGEKVTIQTPGGE-MQVEIVSVK 158


>UniRef50_Q1QUF3 GreA/GreB family elongation factor n=1 Tax=Chromohalobacter
           salexigens DSM 3043 RepID=Q1QUF3_CHRSD
          Length = 178

 Score =  100 bits (251), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 30/138 (21%), Positives = 51/138 (36%), Gaps = 10/138 (7%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMPHD 52
           + RP +     +A  +    E   Y          +     L   LD  Q+         
Sbjct: 43  VKRPALSTKVGEAAALGDRSENADYTYNKKELNRVIARIRYLGKRLDELQVVDRLPADTS 102

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V   + V   +  DGE     +V   +       +SV AP+  A+LG  + + +    P
Sbjct: 103 RVYFGAYVTLED-DDGEEMTIRIVGHDETDTDKRWISVDAPLAQAMLGKGLDEDVTVNAP 161

Query: 113 GGVATHLEVLELEYQPEA 130
           GG  T++ + ++ Y PEA
Sbjct: 162 GGDTTYI-ITDIAYDPEA 178


>UniRef50_Q2Z001 Transcription elongation factor n=1 Tax=uncultured candidate
           division OP8 bacterium RepID=Q2Z001_9BACT
          Length = 156

 Score =  100 bits (251), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 27/134 (20%), Positives = 51/134 (38%), Gaps = 9/134 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHD 52
           + RP  +    +A     L E   +                L   +  A +  P ++  +
Sbjct: 24  VDRPANVKAIEEARGHGDLRENADFKCAKDEQAMIVGRIAYLQGRISHAAVIDPSKLSGN 83

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V   +RV  +NL  GE  V  LV   +       +S+ +P+   L+   VG+     +P
Sbjct: 84  RVVFGARVFLKNLDTGEPIVYRLVGEDEADIEQGSISITSPLARGLIRREVGEQAKIAVP 143

Query: 113 GGVATHLEVLELEY 126
            G     E++++E+
Sbjct: 144 SG-IKSFEIVKIEF 156


>UniRef50_B4RBL2 Transcription elongation factor n=1 Tax=Phenylobacterium zucineum
           HLK1 RepID=B4RBL2_PHEZH
          Length = 143

 Score =  100 bits (250), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 39/126 (30%), Positives = 56/126 (44%), Gaps = 2/126 (1%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
           S P + + D +   +  ++        P    L  EL RA +      P DVV + S V+
Sbjct: 9   SNPRVTVLDEEYAPLADIVCGSP-RATPGLALLWNELSRATLVQAGRAPADVVRLGSAVE 67

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           + +L+  E R   LV P +      +  V   +GAALLGLR GD  HW  P G    L+V
Sbjct: 68  YTDLTRRESRRIRLVLPREARPPALE-PVSGTIGAALLGLRPGDVFHWRAPSGELRSLQV 126

Query: 122 LELEYQ 127
             +E  
Sbjct: 127 DAVEPP 132


>UniRef50_A6EMP4 Transcription elongation factor n=4 Tax=Bacteroidetes
           RepID=A6EMP4_9BACT
          Length = 139

 Score =  100 bits (250), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 36/129 (27%), Positives = 59/129 (45%), Gaps = 6/129 (4%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIAD----ALNAELDRAQMCSPEEMPHDVVTM 56
           M   ++II   +   +  +L    YA           LN EL  A +   EEMP DV+  
Sbjct: 1   MKYGSVIIEKKEYVFLKRILNISGYAADFEIQKSFKRLNEELKTAIIVDEEEMPTDVIRF 60

Query: 57  NSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVA 116
           NS+V   +  +G  +   +V PA       ++S++  +GAAL G   GD++ WE P G  
Sbjct: 61  NSQV-LISTKNGWKKEFQIVSPALKDVKADKISILTVMGAALFGYAQGDTVEWEFPTGKN 119

Query: 117 THLEVLELE 125
             + + ++ 
Sbjct: 120 L-ITIEKVA 127


>UniRef50_B9XEY1 GreA/GreB family elongation factor n=1 Tax=bacterium Ellin514
           RepID=B9XEY1_9BACT
          Length = 170

 Score =  100 bits (249), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 22/95 (23%), Positives = 42/95 (44%), Gaps = 2/95 (2%)

Query: 33  ALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMA 92
            L   L  A++  P   P + V   + V  R+   G      +V   +       +S ++
Sbjct: 78  QLEQSLATAEIVPPPPQPWEQVRFGATVTVRD-ESGNETRYRIVGVDETDIDRDWVSWLS 136

Query: 93  PVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQ 127
           P+  AL+  R+G+ +H+  P G    LE++ + Y+
Sbjct: 137 PIARALINARIGERVHFRFPAGEKQ-LEIVSITYE 170


>UniRef50_A5CVW9 Transcription elongation factor greA n=4 Tax=Gammaproteobacteria
           RepID=GREA_VESOH
          Length = 159

 Score =  100 bits (249), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 51/135 (37%), Gaps = 10/135 (7%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHD 52
           +SRP II +   A     L E   Y                +  +L R Q+    ++  D
Sbjct: 24  VSRPRIIEDIRIARAHGDLKENAEYHAAKEEQSFVEGRIKEIELKLSRMQIIDVTKLSQD 83

Query: 53  -VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWEL 111
                 + +   N  D       +V   +   S  ++S  +P+ +AL+G   GD +  + 
Sbjct: 84  GRCVFGTTITLMNSVDNSEITYQIVGEDEADISLDKISCHSPIASALMGNEEGDKVIVKA 143

Query: 112 PGGVATHLEVLELEY 126
           P G     ++L +EY
Sbjct: 144 PKGDIV-YKILSVEY 157


>UniRef50_C1XQ58 Transcription elongation factor n=2 Tax=Meiothermus
           RepID=C1XQ58_9DEIN
          Length = 159

 Score =  100 bits (249), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 42/108 (38%), Gaps = 2/108 (1%)

Query: 20  LEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPA 79
             +  +        L + L RA +          V +   V+      G     T+V   
Sbjct: 54  ARRAQWDNDRRISELESILARAVVVEAGNGTPLEVGLGVSVELE-TDTGARMSLTIVGSH 112

Query: 80  KMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQ 127
           +    N ++S  +P+G  L+G +VGD + +  P G      ++EL Y+
Sbjct: 113 EADVFNGKISNESPMGQRLMGKKVGDRVEYPSPKG-VQSYTIVELSYK 159


>UniRef50_Q30T56 Transcription elongation factor n=3 Tax=Campylobacterales
           RepID=Q30T56_SULDN
          Length = 174

 Score =  100 bits (249), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 31/135 (22%), Positives = 54/135 (40%), Gaps = 9/135 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADA--------LNAELDRAQMCSPEEMPHD 52
           + +P      L A  +    E   Y                LNA + +A +  P  + H 
Sbjct: 23  VEKPKTAQEKLVAAALGDRSENADYQAAKEKLRHIDKRLFYLNAMIQKAHIIDPSTLLHT 82

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V+  S V+  +L   +  V T+    +    N  +S+ +P+   +LG RV D    +LP
Sbjct: 83  KVSFGSSVRILDLESDKEEVYTICGVLESEPENGLISIHSPLAQVMLGKRVSDEFKIQLP 142

Query: 113 GGVATHLEVLELEYQ 127
             +    E+LE+ Y+
Sbjct: 143 L-MKKEYEILEIYYK 156


>UniRef50_Q2Y7V5 GreA/GreB family elongation factor n=33 Tax=cellular organisms
           RepID=Q2Y7V5_NITMU
          Length = 213

 Score =  100 bits (249), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 32/136 (23%), Positives = 52/136 (38%), Gaps = 12/136 (8%)

Query: 2   SRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMPHDV 53
            RP +      A       E   Y                L   LD A++  P     D 
Sbjct: 53  ERPQVTATVSWAAANGDRSENADYIYGKKRLREIDRRIRFLTRRLDMAEIIDPSMPREDE 112

Query: 54  --VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWEL 111
             +   + V + N   GE ++ ++V   ++  +   +S ++P+   LL  R GD +    
Sbjct: 113 SRIFFGATVTYINEK-GEEKIVSIVGVNEIDTTRGYISWVSPLARTLLKAREGDVVTLHA 171

Query: 112 PGGVATHLEVLELEYQ 127
           PGG    LE+LE+ YQ
Sbjct: 172 PGGTE-ELEILEVRYQ 186


>UniRef50_Q0BR49 Transcription elongation factor greB n=4 Tax=cellular organisms
           RepID=Q0BR49_GRABC
          Length = 169

 Score =  100 bits (249), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 33/138 (23%), Positives = 55/138 (39%), Gaps = 11/138 (7%)

Query: 2   SRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMP-HD 52
            RP I+     A       E   Y                L   L+ A +  P   P  D
Sbjct: 34  ERPKIVEIVSWAAGNGDRSENGDYLYGKKRLREIDRRVRFLTKRLENAVVIDPATQPHKD 93

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            +   + V + N +D E    T+V   +   +  ++S+++PV  ALLG   GD +    P
Sbjct: 94  RIYFGATVTYINAAD-ETVQVTIVGADEADMALGRISLLSPVAKALLGASKGDEVTVITP 152

Query: 113 GGVATHLEVLELEYQPEA 130
                 L++L+++Y+P A
Sbjct: 153 V-KTEILDILDVDYRPLA 169


>UniRef50_A6W1U9 Transcription elongation factor GreB n=17 Tax=Gammaproteobacteria
           RepID=A6W1U9_MARMS
          Length = 196

 Score = 99.8 bits (248), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 49/133 (36%), Gaps = 10/133 (7%)

Query: 2   SRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMPHDV 53
            RP +     +A       E   Y                L   L+   +        + 
Sbjct: 61  KRPAVTETVREAAAQGDRSENAEYIYGKKQLREIDRRVRYLEKRLEVCTVVDRFPSDQER 120

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           V   + V   +   G ++   +V P ++   ++ +S+ +PV  ALL  + GD +   L G
Sbjct: 121 VFFGAWVTLED-EAGNLKEYRIVGPDELDHHSSYISIDSPVARALLKKQEGDEVVIRLAG 179

Query: 114 GVATHLEVLELEY 126
           G  T++ +  +EY
Sbjct: 180 GEKTYI-IDAVEY 191


>UniRef50_Q03RN4 Transcription elongation factor n=1 Tax=Lactobacillus brevis ATCC
           367 RepID=Q03RN4_LACBA
          Length = 132

 Score = 99.8 bits (248), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 31/132 (23%), Positives = 57/132 (43%), Gaps = 10/132 (7%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADA--------LNAELDRAQMCSPEEMPHD 52
           + RP +I     A     L E   Y       +        +   L  AQ+   ++   D
Sbjct: 2   VQRPKVIDRIKIARSYGDLSENSEYESAKDEQSMLETRISTVERMLQYAQIIDNDDTDKD 61

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            +T+  +V F+   D E    T+V  A+    + ++S  +P+   LLG RVG+++ +  P
Sbjct: 62  EITVGKKVTFQ-EDDDEPEEYTIVGAAEADPMSGKISNDSPIAKGLLGHRVGETVTFPTP 120

Query: 113 GGVATHLEVLEL 124
           GG    ++V+ +
Sbjct: 121 GG-DMTVKVIAV 131


>UniRef50_B8IHN9 GreA/GreB family elongation factor n=1 Tax=Methylobacterium
           nodulans ORS 2060 RepID=B8IHN9_METNO
          Length = 147

 Score = 99.8 bits (248), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 37/122 (30%), Positives = 63/122 (51%), Gaps = 1/122 (0%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFR 63
           P I I++ D +R+ +        G      L +EL+RA +C   E+P  VV+ N RV +R
Sbjct: 8   PPITISNYDFDRLVVYGLTAYMHGDRNVVFLFSELERATVCPAMELPDQVVSANCRVIYR 67

Query: 64  NLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHW-ELPGGVATHLEVL 122
              +  +R   LV+P  +   + ++S  +P+G ALLGL+VGD + + +   G    + V 
Sbjct: 68  IDDEPCLRAHMLVHPCDLISPDDEISAGSPLGIALLGLKVGDRMPFCDTQTGGRHVVAVE 127

Query: 123 EL 124
            +
Sbjct: 128 GV 129


>UniRef50_Q3Z8E7 Transcription elongation factor greA n=2 Tax=Dehalococcoides
           RepID=GREA_DEHE1
          Length = 156

 Score = 99.5 bits (247), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 47/118 (39%), Gaps = 9/118 (7%)

Query: 17  DILLEQPAYAGLPIAD--------ALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDG 68
             + E   Y                +  EL  A +    +     V M S VK R+  +G
Sbjct: 40  KDMRENAPYHAAKEQRGQIEGRIKEIEHELKYADVSEYTDTNTSKVNMGSTVKLRDPKNG 99

Query: 69  EVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
           E    TLV P ++     ++S  +P+G A+     G+ I  E+P G   ++ + ++ +
Sbjct: 100 ECCTYTLVSPKEIEPLKGKISASSPIGKAVFNRNKGEQIEIEVPSGTLQYI-IEDISF 156


>UniRef50_Q3ATA7 Transcription elongation factor greA n=13 Tax=Bacteria
           RepID=GREA_CHLCH
          Length = 160

 Score = 99.1 bits (246), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 36/136 (26%), Positives = 62/136 (45%), Gaps = 10/136 (7%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADA--------LNAELDRAQMCSPEEMPHDV 53
           +R  ++    +A     L E   Y       +        L ++L  A +  P+++  D 
Sbjct: 26  TRKEVLEKIAEARAHGDLSENAEYDAAREEQSQIEARIGDLESKLSAATILDPKQIKTDK 85

Query: 54  VTMNSRVKFRNLSD-GEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
           V + + VK RNL +  E+   TLV   +      ++SV +PVG +L+G  VG  +   +P
Sbjct: 86  VYILTSVKLRNLDNPDEIIEYTLVSSEEADTDAGKISVRSPVGRSLIGKTVGAKVTIVVP 145

Query: 113 GGVATHLEVLELEYQP 128
            G   H E+LE+  +P
Sbjct: 146 KGE-LHYEILEIFVKP 160


>UniRef50_C1F9R4 Transcription elongation factor GreA n=1 Tax=Acidobacterium
           capsulatum ATCC 51196 RepID=C1F9R4_ACIC5
          Length = 165

 Score = 99.1 bits (246), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 31/119 (26%), Positives = 46/119 (38%), Gaps = 9/119 (7%)

Query: 13  AERIDILLEQPAYAGLPIADA--------LNAELDRAQMCSPEEMPHDVVTMNSRVKFRN 64
           A  +  L E   Y                L   +    + +   +PHD V   S V+  +
Sbjct: 31  AAALGDLSENAEYHMAKQRQEFVNARLGQLKKRMAELSLVNLANIPHDRVAFGSTVEVFD 90

Query: 65  LSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLE 123
            S  E     LV   +   S   +S  +P+G AL+G +VGD+     P G    LEVL+
Sbjct: 91  TSKDEKIEYKLVTSEESDVSKGLISTTSPIGRALIGKQVGDTATVVTPSG-NRELEVLK 148


>UniRef50_C8S319 GreA/GreB family elongation factor n=1 Tax=Rhodobacter sp. SW2
           RepID=C8S319_9RHOB
          Length = 167

 Score = 99.1 bits (246), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 36/118 (30%), Positives = 52/118 (44%), Gaps = 6/118 (5%)

Query: 14  ERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVR 73
           ER+D L E            L A L  A    P   P   V   +RV+   L+DG  +V 
Sbjct: 55  ERLDKLPEAA---AERDIRYLEARLRSAIPVDPSSQPAGEVAFGARVEVA-LADGSRQVW 110

Query: 74  TLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEY-QPEA 130
            +    +   +  +++  +P+  ALLG  VGD + W  P G    LEVL + Y  P+A
Sbjct: 111 QITGEDEADATQNRIAPQSPLARALLGAEVGDLVIWRKPSG-PVELEVLAIAYADPQA 167


>UniRef50_A3HZU2 Transcription elongation factor GreB n=2 Tax=Bacteroidetes
           RepID=A3HZU2_9SPHI
          Length = 166

 Score = 98.7 bits (245), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 20/104 (19%), Positives = 43/104 (41%), Gaps = 1/104 (0%)

Query: 23  PAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMT 82
            +         L+  +  A++    E P + +   ++V  +     +     LV   +  
Sbjct: 64  ASNFISAKIKLLDERIATAKIVDLSEQPKNEIRFGAKVTLKIGKSPKAMTYQLVGVDEAD 123

Query: 83  DSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
            S  ++S ++P+   L+G +VG+     L  G     EV+E++Y
Sbjct: 124 ISKNKISFISPIAMILIGKKVGEKATLSLTKG-DRVFEVMEIKY 166


>UniRef50_C4Z9L9 Transcription elongation factor n=3 Tax=Firmicutes
           RepID=C4Z9L9_EUBR3
          Length = 185

 Score = 98.7 bits (245), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 29/137 (21%), Positives = 55/137 (40%), Gaps = 9/137 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAG--------LPIADALNAELDRAQMCSPEEMPHD 52
           + R  +     +A     L E   Y              + +   L  A++   EE+  D
Sbjct: 49  VKRKEVSQKIKEAREQGDLSENAEYDAAKDEQRDIEARIEEIEKILKNAEVVVEEEVDLD 108

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            +++  +++  +    E     +V   +      ++S  +PVG ALLG +VGD++  E  
Sbjct: 109 KISIGCKIRILDCEFDEELEYKIVGSTEANSLKGKISNESPVGKALLGKKVGDTVTVETQ 168

Query: 113 GGVATHLEVLELEYQPE 129
            G     +VLE++   E
Sbjct: 169 VGE-LTYKVLEIQRAEE 184


>UniRef50_Q98Q16 Transcription elongation factor greA n=3 Tax=Mycoplasma
           RepID=GREA_MYCPU
          Length = 157

 Score = 98.7 bits (245), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 48/132 (36%), Gaps = 12/132 (9%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHD 52
           + RP +I+   +A +   L E   Y                L   L  A          D
Sbjct: 27  VERPAVILEIKEARQQGDLSENAEYDAAREKQGQIEDRITELENILSNAISIQESH--SD 84

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            + + S V+  N S G+ R   +V       +  ++S  +P+  +++G   GD +  + P
Sbjct: 85  KIGLGSVVRILNQSTGKERTFKIVGSFDTDPTQNKISYESPLAKSIIGFSKGDVVEIDAP 144

Query: 113 GGVATHLEVLEL 124
                  ++L +
Sbjct: 145 D--KYTTKILSV 154


>UniRef50_C7PP41 Transcription elongation factor n=1 Tax=Chitinophaga pinensis DSM
           2588 RepID=C7PP41_CHIPD
          Length = 157

 Score = 98.3 bits (244), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 45/116 (38%), Gaps = 7/116 (6%)

Query: 9   NDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDG 68
            + DA +      +           L + +  A++   + +    V++  +V   N+++ 
Sbjct: 47  AEYDAAK------EAQGMHEAKVAILESAIATARIVEADSIDTSKVSILCKVTITNMANK 100

Query: 69  EVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
           +     LV   +      ++SV +P+G  LLG  VG+      P G     ++  +
Sbjct: 101 KTVTYQLVSEKEADLKLNKISVTSPIGKGLLGKAVGEIADVHAPNGS-LKFKIENI 155


>UniRef50_Q01RT9 GreA/GreB family elongation factor n=2 Tax=Acidobacteria
           RepID=Q01RT9_SOLUE
          Length = 164

 Score = 98.3 bits (244), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 47/119 (39%), Gaps = 10/119 (8%)

Query: 14  ERI-DILLEQPAYAGLPIAD--------ALNAELDRAQMCSPEEMPHDVVTMNSRVKFRN 64
            R+   L E   Y                L + L +  M    ++P D   + S V   +
Sbjct: 30  ARLHGDLKENAEYHAAKDRQGFVSARLGQLKSRLGQLAMIDFTKIPRDKAGLGSTVVVLD 89

Query: 65  LSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLE 123
           +   +     LV   +    N ++S  +P+G ALLG  VGD +    PGG    LE+L+
Sbjct: 90  VKSDQEITYHLVTSEEADAPNGKVSTTSPIGRALLGKTVGDEVKVMSPGG-VKELEILK 147


>UniRef50_Q1AU03 Transcription elongation factor n=1 Tax=Rubrobacter xylanophilus
           DSM 9941 RepID=Q1AU03_RUBXD
          Length = 154

 Score = 98.3 bits (244), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 27/107 (25%), Positives = 44/107 (41%), Gaps = 2/107 (1%)

Query: 20  LEQPAYAGLPIADALNAELDRAQMCSP-EEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYP 78
            +            L   L  A++  P        V + +RV  R + DG  R   +V  
Sbjct: 46  AKNEQGLLERRISELQRRLRNAKIVDPASSAEEGAVDLGTRVTLRVVGDGRERTFQIVGA 105

Query: 79  AKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
            +   ++ +LS  +PVG ALL  RVG+ +    P G     E++ +E
Sbjct: 106 NEADPASGKLSHASPVGKALLRRRVGEKVRVSTPRGAT-EYEIVSVE 151


>UniRef50_D0J5N8 Kelongation factor GreB n=4 Tax=Proteobacteria RepID=D0J5N8_COMTE
          Length = 231

 Score = 98.3 bits (244), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 34/135 (25%), Positives = 52/135 (38%), Gaps = 11/135 (8%)

Query: 2   SRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPE-EMPHD 52
            RP I+     A       E   Y                L   L+ A++  P      D
Sbjct: 93  ERPKIVEIVHWAASNGDRSENGDYLYGKKRLREIDRRIRFLTKRLEIAEVVDPAVHAGSD 152

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V   + V + +  +G  R  T++   +   +  Q+S +APV  ALL  RVGD +    P
Sbjct: 153 QVFFGATVSYVD-DEGVERTITIMGIDEADSAQNQVSWIAPVSRALLKARVGDEVALPTP 211

Query: 113 GGVATHLEVLELEYQ 127
            G    LE+L++ Y 
Sbjct: 212 AG-VRMLEILDVSYP 225


>UniRef50_Q1PYP5 Transcription elongation factor n=1 Tax=Candidatus Kuenenia
           stuttgartiensis RepID=Q1PYP5_9BACT
          Length = 741

 Score = 97.5 bits (242), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 50/120 (41%), Gaps = 3/120 (2%)

Query: 8   INDLDAERID--ILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNL 65
           I+  D           +     +  A+ L A+L +     P  +  ++V+  ++V  +N 
Sbjct: 620 ISRGDLRENAEYQAAREKQAQLIEKAERLKADLQKIVFIEPYTVKTNIVSPGTKVTIKNK 679

Query: 66  SDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
                   TL+ P         +S ++P+G  LL  + G+++  +LP       +++++E
Sbjct: 680 DKETTETYTLLGPWDADIDKNIISYLSPIGKGLLNKKTGETVTIQLPENEIVC-DIIKIE 738


>UniRef50_C0JZV3 Transcription elongation factor GreA n=1 Tax=uncultured bacterium
           URE4 RepID=C0JZV3_9BACT
          Length = 112

 Score = 97.5 bits (242), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 20/95 (21%), Positives = 43/95 (45%), Gaps = 1/95 (1%)

Query: 31  ADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSV 90
              L  ++  A++    ++  D V + S+V   N++        +V  ++   S   LS 
Sbjct: 18  IARLKEKVANARVIDESKLSADTVQLLSKVTVENMNAKMKMQFQIVGESEADFSKGLLSA 77

Query: 91  MAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
             P+G AL+G   G+ +  ++P G     ++L++ 
Sbjct: 78  STPIGKALMGHGKGEVVEAKVPSG-IMKFKILDIS 111


>UniRef50_D1PEW3 Transcription elongation factor n=1 Tax=Prevotella copri DSM 18205
           RepID=D1PEW3_9BACT
          Length = 154

 Score = 96.8 bits (240), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 55/133 (41%), Gaps = 9/133 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGL-PIADALNAE-------LDRAQMCSPEEMPHD 52
           +  P +     +A     L E   Y         L +        L+ A++     +  D
Sbjct: 22  VELPAVRDAIAEARDKGDLSENFEYHAAKREQGKLLSRISFKQKVLENARVIDKSRLKSD 81

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V + S++K  NL++      T+V P +    + ++S+ +P+  ALLG + G+ +  ++P
Sbjct: 82  TVGLLSKIKITNLANKCSMNYTIVNPHEADLHSGKISIKSPIAKALLGKKAGEEVMVKVP 141

Query: 113 GGVATHLEVLELE 125
            G      +  +E
Sbjct: 142 AG-LLKFRLDSVE 153


>UniRef50_UPI0001C37CEA transcription elongation factor GreA n=1 Tax=Ruminococcus
           flavefaciens FD-1 RepID=UPI0001C37CEA
          Length = 156

 Score = 96.8 bits (240), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 49/117 (41%), Gaps = 7/117 (5%)

Query: 9   NDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDG 68
            + D  + +  + +           L   +D A++     +  D + M+S++  + L  G
Sbjct: 46  AEYDEAKNEQAILEA------HIAELQYTIDNAEIVDDSNISVDEIGMSSKITIKRLDTG 99

Query: 69  EVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
           ++   T+V          ++S  +P+G A +  RVGD    + P G     EV+E+ 
Sbjct: 100 KIETFTIVSTNHANVREGKISDASPIGKAAMKKRVGDVFIVDAPAGE-LKFEVVEIS 155


>UniRef50_D2T9B8 Transcription elongation factor greB n=3 Tax=Erwinia
           RepID=D2T9B8_ERWPY
          Length = 187

 Score = 96.4 bits (239), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 48/133 (36%), Gaps = 10/133 (7%)

Query: 2   SRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMPHDV 53
            RP +      A  +    E   Y                L   L++ ++          
Sbjct: 53  ERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYLTKCLEQLRIVDYSPQQDGK 112

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           V   + V+  N  DG+++   +V   ++   N  +S+ +P+  ALL   VGD+     P 
Sbjct: 113 VFFGAWVEVEN-DDGDIKRFRIVGYDEIFGRNDYISIDSPMARALLKKEVGDAATVFTPA 171

Query: 114 GVATHLEVLELEY 126
           G A    + ++ Y
Sbjct: 172 GEALWY-INDISY 183


>UniRef50_Q04HS9 Transcription elongation factor greA n=90 Tax=Bacilli
           RepID=GREA_STRP2
          Length = 160

 Score = 96.0 bits (238), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 56/133 (42%), Gaps = 9/133 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADA--------LNAELDRAQMCSPEEMPHD 52
           + RP ++     A     L E   Y       A        L  ++  A++ + + +  D
Sbjct: 26  VRRPEVVERIKIARSYGDLSENSEYEAAKDEQAFVEGQISSLETKIRYAEIVNSDAVAQD 85

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V +   V  + + + E  V  +V  A       ++S  +P+G AL+G + GD+   E P
Sbjct: 86  EVAIGKTVTIQEIGEDEEEVYIIVGSAGADAFAGKVSNESPIGQALIGKKTGDTATIETP 145

Query: 113 GGVATHLEVLELE 125
            G    +++L++E
Sbjct: 146 VGS-YDVKILKVE 157


>UniRef50_C6X3W9 Transcription elongation factor GreB n=1 Tax=Flavobacteriaceae
           bacterium 3519-10 RepID=C6X3W9_FLAB3
          Length = 183

 Score = 96.0 bits (238), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 41/104 (39%), Gaps = 1/104 (0%)

Query: 23  PAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMT 82
                      LN  +  A++     +    V   + V F+NL++   +   LV   +  
Sbjct: 81  AFNHLNARLQLLNGRMASAKIIDTARLSQGEVHFGATVTFKNLNNNLRQTFQLVGVDEAN 140

Query: 83  DSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
            S  +L+   P+  AL+  +VG+ +  +L        E+L + Y
Sbjct: 141 ISKGKLAFTTPLAKALINSKVGEKVTLQLGDKTNI-FEILSIGY 183


>UniRef50_C1ZBG3 Transcription elongation factor n=1 Tax=Planctomyces limnophilus
           DSM 3776 RepID=C1ZBG3_PLALI
          Length = 160

 Score = 96.0 bits (238), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 28/119 (23%), Positives = 52/119 (43%), Gaps = 11/119 (9%)

Query: 17  DILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDG 68
             L E   Y G            ++L ++L    +     +P  VV   +RV  +N  DG
Sbjct: 40  GDLKENAEYHGQREEQGRLQARINSLKSKLASCYIVDKSTLPKGVVAFGTRVTVKNTDDG 99

Query: 69  EVRVRTLVYPAKMTDSNT--QLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
           ++     V P +    +   ++   +P+ +ALLG +V D +  ++P G   + E+ E+E
Sbjct: 100 DIEKYEFVGPGEEDYMSDVMKILTTSPLASALLGKKVNDKVSIQVPRGTI-NYEITEIE 157


>UniRef50_Q8P7P8 Transcription elongation factor greB n=53 Tax=Proteobacteria
           RepID=GREB_XANCP
          Length = 168

 Score = 95.6 bits (237), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 27/134 (20%), Positives = 48/134 (35%), Gaps = 9/134 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMPHD 52
           + RP ++     A       E   Y                L+  L+  ++         
Sbjct: 33  LRRPEVVRALAAAAAEGDRSENAEYTYRKKQLGEIDRRVRYLSKRLEALRVVDTAPTDPQ 92

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V   ++V+  +   GE+    +V P +       +S+ +P+  ALL  RV D    +LP
Sbjct: 93  AVFFGAQVELEDADSGELLRYRIVGPDETDAGRGWISIDSPLARALLKKRVDDEFEAQLP 152

Query: 113 GGVATHLEVLELEY 126
            G      V+ +EY
Sbjct: 153 SG-KHTFVVVVVEY 165


>UniRef50_Q88KH5 Transcription elongation factor greB n=84 Tax=Gammaproteobacteria
           RepID=GREB_PSEPK
          Length = 162

 Score = 95.6 bits (237), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 45/132 (34%), Gaps = 10/132 (7%)

Query: 3   RPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMPHDVV 54
           RP I      A  +    E   Y                L   L+  ++ +        V
Sbjct: 26  RPEITQKVAWAASLGDRSENADYQYNKKLLREIDRRVRYLRKRLEDVKVVAYSPEQEGKV 85

Query: 55  TMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGG 114
              + V+  N  +GE     +V   ++   N  +S+ +P+  ALL    GD +    P G
Sbjct: 86  FFGAWVEIEN-DEGETMKFRIVGYDEIYGRNDYISIDSPMARALLKKEEGDEVVVHTPTG 144

Query: 115 VATHLEVLELEY 126
            AT   V  + Y
Sbjct: 145 EATWY-VSSIRY 155


>UniRef50_B2KBD2 GreA/GreB family elongation factor n=1 Tax=Elusimicrobium minutum
           Pei191 RepID=B2KBD2_ELUMP
          Length = 156

 Score = 95.6 bits (237), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 51/131 (38%), Gaps = 9/131 (6%)

Query: 5   TIIINDLDAERIDILLEQPAYAGLPIADA--------LNAELDRAQMCSPEEMPHDVVTM 56
            + +   +A +   L E   YA               L  +L  AQ+    ++      +
Sbjct: 27  KLSLEIGEAAQQGDLRENAEYAAAKSRQEETLVKIQDLEQKLRNAQITDDIQVDKSEARI 86

Query: 57  NSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVA 116
            + V   ++S       TLV   +       LSV +P+  ++LG + G+     LP G  
Sbjct: 87  GATVTVHDISADIDFTYTLVGSMESNPEKGLLSVQSPLAVSILGKKEGEEFEAVLPKGKK 146

Query: 117 THLEVLELEYQ 127
              ++++LEY+
Sbjct: 147 M-YKLVKLEYK 156


>UniRef50_Q1J0L4 Transcription elongation factor n=3 Tax=Deinococcus
           RepID=Q1J0L4_DEIGD
          Length = 156

 Score = 95.2 bits (236), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 34/122 (27%), Positives = 51/122 (41%), Gaps = 6/122 (4%)

Query: 8   INDLDAERIDILLEQPAYAGLPIAD--ALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNL 65
           I D D        E         A    L  +L+RAQ+   +        + ++VK R+ 
Sbjct: 39  IADGDLRESAAYDEARMQQSENEARILELEDQLERAQIIEEDA--SGGAGLGAKVKVRDE 96

Query: 66  SDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
             G  R   LV   ++     ++S  +P+G AL G R G  +  +LP G A   EVLE+ 
Sbjct: 97  K-GNERQFELVGTYEVDVLKGKISDASPIGQALSGKRPGQIVTVQLPKGSA-KFEVLEVT 154

Query: 126 YQ 127
           Y 
Sbjct: 155 YD 156


>UniRef50_A5FHJ3 GreA/GreB family elongation factor n=3 Tax=Flavobacteriaceae
           RepID=A5FHJ3_FLAJ1
          Length = 143

 Score = 95.2 bits (236), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 35/125 (28%), Positives = 64/125 (51%), Gaps = 2/125 (1%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           MS+  II+     + I   + +         + L +EL  A     + +P DVV++N +V
Sbjct: 18  MSQNNIILTTGTYDLIKDHVRRKKVT-PQEEELLLSELKHATQVLRKNLPEDVVSVNRKV 76

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
            +++ +  + +   LV P K+  S  ++SV++  G A++G +VGD I W    G    LE
Sbjct: 77  TYKDHNTNQEKTILLVGPEKVKVSKNKISVLSDEGIAMVGYKVGDLIEWPAKKGH-LKLE 135

Query: 121 VLELE 125
           +L++E
Sbjct: 136 ILKVE 140


>UniRef50_Q11G80 GreA/GreB family elongation factor n=1 Tax=Chelativorans sp. BNC1
           RepID=Q11G80_MESSB
          Length = 176

 Score = 95.2 bits (236), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 35/129 (27%), Positives = 54/129 (41%), Gaps = 1/129 (0%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKF 62
           +    +   D E +  + E+       +   L  +L+ A++  PE  P DVVT+NSR+ F
Sbjct: 4   KRGCTLTTRDFETLQQMFEEHRDRNEAMTMLLRHKLETARVTRPEVTPDDVVTLNSRISF 63

Query: 63  RNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVL 122
           R + +G    R +            L +    G ALLGL  G          +   L+V 
Sbjct: 64  R-VGNGMPETRIICRDRSRGPLGYFLPITTIRGLALLGLTEGQMTPVSRGRSLVEILQVT 122

Query: 123 ELEYQPEAA 131
            + YQPE A
Sbjct: 123 AIHYQPERA 131


>UniRef50_A6H247 Transcription elongation factor greA n=33 Tax=Bacteroidetes
           RepID=GREA_FLAPJ
          Length = 158

 Score = 95.2 bits (236), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 32/135 (23%), Positives = 51/135 (37%), Gaps = 9/135 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADAL--------NAELDRAQMCSPEEMPHD 52
           + RP    +  +A     L E   Y     A  L              A++    ++   
Sbjct: 25  IERPKASADIAEARDKGDLSENAEYDAAKEAQGLLELKIKKMEEVYSNARLIDESQLDVS 84

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
              + S VK +N S+G      LV  ++      ++SV +P+G  LLG  VG+     +P
Sbjct: 85  KALVLSHVKIKNQSNGMEMSYHLVAESEADLKTGKISVTSPIGKGLLGKSVGEIAEITVP 144

Query: 113 GGVATHLEVLELEYQ 127
            G     EVLE+   
Sbjct: 145 NG-ILKFEVLEITRD 158


>UniRef50_Q1CX76 Transcription elongation factor, GreA/GreB family n=2
           Tax=Cystobacterineae RepID=Q1CX76_MYXXD
          Length = 167

 Score = 94.8 bits (235), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 24/95 (25%), Positives = 41/95 (43%), Gaps = 2/95 (2%)

Query: 32  DALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVM 91
             L A L+  ++  P+      V   + V+  +   G      +V P +      +LSV 
Sbjct: 72  QELAAVLEDVRVVEPDASQAGRVFFGAWVELEDEDGG-PVRYRIVGPDESDVKAGRLSVE 130

Query: 92  APVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
           +P+  ALLG  VG+S+  + P G      V  ++Y
Sbjct: 131 SPLARALLGKEVGESVVVDRPRG-PVEYTVTAVDY 164


>UniRef50_A6NPJ1 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus
           ATCC 29799 RepID=A6NPJ1_9BACE
          Length = 197

 Score = 94.8 bits (235), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 30/131 (22%), Positives = 52/131 (39%), Gaps = 9/131 (6%)

Query: 3   RPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMPHDVV 54
           RP ++    +A     L E   Y                L   +  A + S +  P D V
Sbjct: 55  RPQLLEAVKEARGFGDLSENFEYKAAKQEKNRNESRIRFLENMIRTAVVISDQAAP-DTV 113

Query: 55  TMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGG 114
            +  +V      D E     +V   +    + ++S  +PVG+ALLG RVGD I+ ++   
Sbjct: 114 GLYDKVTVYLEEDDETETYQVVTTMRQDALHGRISKESPVGSALLGKRVGDRIYIQVNDN 173

Query: 115 VATHLEVLELE 125
              ++ +  +E
Sbjct: 174 YGYYVVIKAIE 184


>UniRef50_Q4A759 Transcription elongation factor greA n=4 Tax=Mycoplasma
           RepID=GREA_MYCH7
          Length = 160

 Score = 94.8 bits (235), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 26/132 (19%), Positives = 52/132 (39%), Gaps = 11/132 (8%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHD 52
           + R  +I    DA     L E   Y                L   + +A++    ++   
Sbjct: 29  VERVNVIQEIKDARSQGDLSENAEYDVAREKQGIIESRIRELETIISKAKIIK-ADLGSS 87

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V++ S+V   N+  GE++   +V         +++S  +P+  ALLG   GD +  ++ 
Sbjct: 88  RVSIGSKVSLENVESGEIQTFQIVSSIDADPFKSKISNFSPIAQALLGQHQGDEVEVDV- 146

Query: 113 GGVATHLEVLEL 124
                 + +LE+
Sbjct: 147 -NEKYSVRILEV 157


>UniRef50_Q5SKM1 Transcription elongation factor n=5 Tax=Thermus RepID=Q5SKM1_THET8
          Length = 155

 Score = 94.8 bits (235), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 41/106 (38%), Gaps = 4/106 (3%)

Query: 20  LEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPA 79
             +  +        L   L RA +        D V +  +V+      GE     +V   
Sbjct: 52  ARRAMWQNEARIAQLEDLLSRAVIVENGSF--DQVALGCQVELE-TETGERLSLAIVGSH 108

Query: 80  KMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
           +    + ++S  +P+G ALLG +VGD +      G      +LE++
Sbjct: 109 EADIFSGKISDESPLGQALLGKKVGDVVEIRGKKGAQV-YTILEIK 153


>UniRef50_O51157 Transcription elongation factor greA n=23 Tax=Borrelia
           RepID=GREA_BORBU
          Length = 901

 Score = 94.4 bits (234), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 48/124 (38%), Gaps = 10/124 (8%)

Query: 13  AERIDILLEQPAYAGLPIADA--------LNAELDRAQMCSPEEMPHDVVTMNSRVKFRN 64
           A  +  L E   Y                L  E++ A++   +++   VV   ++V   N
Sbjct: 777 ARELGDLKENAEYHSAKEKQQFLTKRLNSLMLEIENAKVIDTKDLQSSVVGFGTKVVILN 836

Query: 65  LSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHL--EVL 122
              G+     ++ P +       +S  +P G  LL  R GDS+++ +      +   ++ 
Sbjct: 837 EVTGKDESYLILGPWESNPDEGIISYKSPFGENLLDSREGDSLNFVINNTNFKYFVKKIE 896

Query: 123 ELEY 126
            +++
Sbjct: 897 PIKF 900


>UniRef50_B1ZD84 GreA/GreB family elongation factor n=4 Tax=Methylobacterium
           RepID=B1ZD84_METPB
          Length = 149

 Score = 94.4 bits (234), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 39/124 (31%), Positives = 61/124 (49%), Gaps = 1/124 (0%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
            RP I +   D +R+          G P AD L ++L+RA   +    P DVV +  RV+
Sbjct: 6   KRPPITLPTYDFDRLVASGLAAYQRGDPYADLLLSKLERAASFAASPPPRDVVAVTCRVR 65

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWE-LPGGVATHLE 120
           +R   +  VR   LVYP  +  S  ++S  + +G A+LGLR GD I +     G    +E
Sbjct: 66  YRLDDEPTVRAHRLVYPGHVIASEEEISAASALGVAMLGLRRGDRIPFRDNATGSEHVVE 125

Query: 121 VLEL 124
           + ++
Sbjct: 126 IADV 129


>UniRef50_Q12SN9 Transcription elongation factor GreB n=17 Tax=Bacteria
           RepID=Q12SN9_SHEDO
          Length = 166

 Score = 94.1 bits (233), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 45/134 (33%), Gaps = 11/134 (8%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHDVV 54
           RP I      A  +    E   Y                L   ++  ++          V
Sbjct: 32  RPEITKKVAWAASLGDRSENADYKENKRLLRQIDGRVRFLRKRIEALKVVPYAAEQEGKV 91

Query: 55  TMNSRVKFRNLSDGEVRVRTLVYPAKM-TDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
              + V+  N  +G  +   +V P ++  D+   +S+ +P+  ALL   V D      P 
Sbjct: 92  FFGAWVEIEN-DEGVKKRFRIVGPDEIYGDAKGYISIDSPMARALLKKEVDDDASVLTPT 150

Query: 114 GVATHLEVLELEYQ 127
           G      + ++ YQ
Sbjct: 151 GEQFWY-INKIFYQ 163


>UniRef50_A5IYH4 Transcription elongation factor greA n=3 Tax=Mycoplasma
           RepID=GREA_MYCAP
          Length = 163

 Score = 94.1 bits (233), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 55/135 (40%), Gaps = 11/135 (8%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIAD--------ALNAELDRAQMCSPEEMPHD 52
           + RP +  +  +A     L E   Y                L   L+ A++   +    +
Sbjct: 29  VERPAVQASLKEARAQGDLSENAEYDAARDRQSEVERRILELERILENAEIIDTKSAVQN 88

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLR-VGDSIHWEL 111
              + + V++ N+   +  V T++ P        ++S  +PV  A++    +GD +  E+
Sbjct: 89  KAGIGATVRYLNMKTNKELVVTIMGPHDSNPIENKISNESPVAQAIMEANGIGDVVEVEV 148

Query: 112 PGGVATHLEVLELEY 126
           P     +++VL++ Y
Sbjct: 149 P--QKYNIKVLDISY 161


>UniRef50_B1H062 Transcription elongation factor n=1 Tax=uncultured Termite group 1
           bacterium phylotype Rs-D17 RepID=B1H062_UNCTG
          Length = 158

 Score = 93.7 bits (232), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 47/109 (43%), Gaps = 3/109 (2%)

Query: 20  LEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPA 79
            ++     +     L +++  A++   + +  D V +   V  ++   G      +V   
Sbjct: 50  AKETLANLIRRIMELTSKIACAKIIEEQNIDSDKVFIGVTVTIKD-EYGADYQYAIVDLE 108

Query: 80  KMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL-EYQ 127
           +      ++S+ +P+   LLG   G+++  ELP G     ++L++  YQ
Sbjct: 109 EADPVANRISIQSPLAQGLLGHTAGETVAVELPAGKT-KFKILKISRYQ 156


>UniRef50_D2RL35 GreA/GreB family elongation factor n=3 Tax=Veillonellaceae
           RepID=D2RL35_ACIFE
          Length = 172

 Score = 93.7 bits (232), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 23/130 (17%), Positives = 49/130 (37%), Gaps = 5/130 (3%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADAL--NAELDRAQMCSPEEMPHDVVTMNSR 59
            R  + I+  D        +            L     +  AQ+    ++  +VV++  +
Sbjct: 32  ERLKVAISYGDISENSEYDDAKNEQAFVEGRILTLENMIRNAQIIKDTDITKNVVSLGCK 91

Query: 60  VKFRNLSDGEVRVRTLVYPAKMTDSNT--QLSVMAPVGAALLGLRVGDSIHWELPGGVAT 117
           VK  ++   +    T+V   +        ++S  +PVG A+LG +VG  +    P G   
Sbjct: 92  VKIEDMETHDQEEYTVVGTTEADPMAEPPRISNESPVGKAILGQKVGAVVKVTTPIGE-L 150

Query: 118 HLEVLELEYQ 127
             +++ +   
Sbjct: 151 DYKIVAVSRP 160


>UniRef50_A0M1N1 GreA-like transcription elongation factor n=3 Tax=Flavobacteriaceae
           RepID=A0M1N1_GRAFK
          Length = 166

 Score = 93.7 bits (232), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 58/125 (46%), Gaps = 7/125 (5%)

Query: 8   INDLDAERIDILLEQPAYAGLPI------ADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
           + DL+ ER  +  E                + L+  L  A++   ++ P D +   +RVK
Sbjct: 43  LKDLEYERAHVEAENDTEKRRAQSLIDGKINLLSERLQTARLLDSKDQPKDEIRFGARVK 102

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
             N + G+++   +V   +      +++ +AP+  A+ G +VG+ I ++L G     L+V
Sbjct: 103 LTNETSGQLQEFQIVGVDEADIKKKKIAFVAPIAKAVTGRKVGEEIDFKL-GNEIRKLKV 161

Query: 122 LELEY 126
           L + Y
Sbjct: 162 LGITY 166


>UniRef50_B9KZF4 Transcription elongation factor greA n=2 Tax=Thermomicrobia (class)
           RepID=B9KZF4_THERP
          Length = 156

 Score = 93.3 bits (231), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 3/98 (3%)

Query: 28  LPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQ 87
                 +   L RAQM      P D V + SRV   +   G V    +V P +   +  +
Sbjct: 62  EARIREIEHILRRAQMI-TRAGPQDEVRLGSRVTVIDEE-GSVETWVIVSPEEANAAQGR 119

Query: 88  LSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
           +S+ +PVGAALLG RVG ++    PGG      +  +E
Sbjct: 120 ISIESPVGAALLGKRVGTTVTVRAPGGE-MRFTIQRIE 156


>UniRef50_A5VME9 Transcription elongation factor GreA n=49 Tax=Lactobacillaceae
           RepID=A5VME9_LACRD
          Length = 165

 Score = 93.3 bits (231), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 51/131 (38%), Gaps = 11/131 (8%)

Query: 3   RPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMPHDVV 54
           RP  I     A  +  L E   Y                LN +L  A++ +P+      +
Sbjct: 37  RPAKIEQLKAARALGDLSENTEYSTAKRELRHLESRLRYLNKQLQYAEIVTPKN--DHTI 94

Query: 55  TMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGG 114
            + + V      D E     +V   +   +  ++S  +P+G A+L    G ++  E P  
Sbjct: 95  DLGTTVTIEFEDDHEQETYHIVGKQEADLAKQKISFDSPLGQAILHQTAGTTVTVEAPQ- 153

Query: 115 VATHLEVLELE 125
            +  ++++++E
Sbjct: 154 SSYKVKIVKVE 164


>UniRef50_A2SJD8 Transcription elongation factor n=50 Tax=Proteobacteria
           RepID=A2SJD8_METPP
          Length = 213

 Score = 93.3 bits (231), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 34/139 (24%), Positives = 53/139 (38%), Gaps = 11/139 (7%)

Query: 2   SRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMPH-D 52
            RP ++     A +     E   Y                L   L+ A++  P      D
Sbjct: 77  ERPKVVETVSWAAKNGDRSENGDYLYGKKRLREIDRRIRFLTKRLEIAEVADPSVHRGSD 136

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V   + V +    DG  R  T+    +  +   ++S ++PV  ALL  RVGD +    P
Sbjct: 137 QVFFGATVTYA-APDGVERTITIKGIDEADNLQAEVSWISPVARALLKARVGDEVTLLTP 195

Query: 113 GGVATHLEVLELEYQPEAA 131
            G    +EV+E+ Y P  A
Sbjct: 196 QG-PQTIEVIEVRYPPRPA 213


>UniRef50_C5BN87 Transcription elongation factor GreB n=5 Tax=Proteobacteria
           RepID=C5BN87_TERTT
          Length = 172

 Score = 93.3 bits (231), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 46/133 (34%), Gaps = 10/133 (7%)

Query: 2   SRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMPHDV 53
            RP +      A  +    E   Y                L   +D  ++    +     
Sbjct: 41  ERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYLRKRIDSLKVVRYAKEQEGS 100

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           V   S VK  N   GE +   +V   ++      +S+ +P+  ALL  +VGD    +   
Sbjct: 101 VYFGSWVKIEN-EAGENKELRIVGYDEIFGEKNYISIDSPMAKALLRKKVGDEAIVKTEV 159

Query: 114 GVATHLEVLELEY 126
           G     E++E+ Y
Sbjct: 160 GEFC-WEIMEISY 171


>UniRef50_Q2S2N3 Transcription elongation factor n=1 Tax=Salinibacter ruber DSM
           13855 RepID=Q2S2N3_SALRD
          Length = 164

 Score = 92.9 bits (230), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 49/133 (36%), Gaps = 9/133 (6%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHDV 53
            R  I     +A     L E   Y                +   + RA++     +    
Sbjct: 33  ERSRIADEIAEARAKGDLSENAEYDAAKEEQGKLEARIKQIEDTIARARIVDESTVDDSK 92

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
             + S V   NL  G+ +  TLV   +   S  ++SV +P+G  LL    GD +  ++P 
Sbjct: 93  AYILSDVTVENLDTGDEQTFTLVSEEEANISENKISVDSPIGEGLLAQEEGDEVSIDVPA 152

Query: 114 GVATHLEVLELEY 126
           G   H ++ ++  
Sbjct: 153 GT-VHFKIKDISR 164


>UniRef50_A2RGA4 Transcription elongation factor greA n=111 Tax=Firmicutes
           RepID=GREA_STRPG
          Length = 160

 Score = 92.9 bits (230), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 51/133 (38%), Gaps = 9/133 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADA--------LNAELDRAQMCSPEEMPHD 52
           + RP I+     A     L E   Y       A        L  ++  A++   + +  D
Sbjct: 26  VRRPEIVERIKIARSYGDLSENSEYDAAKDEQAFVEGQISTLETKIRYAEIIDSDAVAKD 85

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V +   V  + +   +     +V  A     + ++S  +P+  AL+G + GD +  E P
Sbjct: 86  EVAIGKTVIVQEVGTTDKDTYHIVGAAGADIFSGKISNESPIAQALIGKKTGDKVRIESP 145

Query: 113 GGVATHLEVLELE 125
                 +E++ +E
Sbjct: 146 A-ATYDVEIISVE 157


>UniRef50_B1AIU2 Transcription elongation factor greA n=28 Tax=Ureaplasma
           RepID=GREA_UREP2
          Length = 156

 Score = 92.9 bits (230), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 23/132 (17%), Positives = 45/132 (34%), Gaps = 9/132 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIA--------DALNAELDRAQMCSPEEMPHD 52
           +  P I     DA     L E   Y              D +   L+  ++        D
Sbjct: 24  VKWPAITKQLQDAREQGDLSENADYDAAKNEQAALKKRKDEIEEILENYELIEDVLRSTD 83

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V++ S ++  N       V TLV          ++S+  P+G AL+  + G  +     
Sbjct: 84  EVSIGSTIEIYNYQKDCEEVITLVGSMDSDPFANKISIDTPLGKALVKQKKGTEVTVHTL 143

Query: 113 GGVATHLEVLEL 124
                 ++++++
Sbjct: 144 A-SPYKVKIIKI 154


>UniRef50_Q13CU9 Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris
           BisB5 RepID=Q13CU9_RHOPS
          Length = 156

 Score = 92.5 bits (229), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 42/127 (33%), Positives = 60/127 (47%), Gaps = 2/127 (1%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKF 62
            P + I   D  R+  +  Q   +  P+   L +EL+RA +      P   V ++  V F
Sbjct: 2   NPPVSIASRDFGRLRQIAVQALASRDPVGRFLFSELERAVVID-SPAPPLTVRLDDWVTF 60

Query: 63  RNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVL 122
           R   D  +  R LV P     +   LSV++PVGAAL+GLR G  +H++   GV     V 
Sbjct: 61  RADDDQPLESRILVLPGHYRRNALHLSVLSPVGAALVGLRPGARMHYQGVDGVQHVATVE 120

Query: 123 ELEYQPE 129
            LE  PE
Sbjct: 121 SLE-PPE 126


>UniRef50_B5ZLJ0 Transcription elongation factor GreB n=5 Tax=Proteobacteria
           RepID=B5ZLJ0_GLUDA
          Length = 180

 Score = 92.5 bits (229), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 27/111 (24%), Positives = 45/111 (40%), Gaps = 3/111 (2%)

Query: 22  QPAYAGLPIADALNAELDRAQMCSPE-EMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAK 80
           +           L   +++A +  P  +   D V   + V +    D   R   +V   +
Sbjct: 70  KRLREIDRRVRFLTRRIEKAIVVDPAAQTRRDRVFFGATVTYVTEDD-TERTVVIVGVDE 128

Query: 81  MTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQPEAA 131
              +  Q+S+ +PV  ALLG RVGD +    P G    +E+L + Y   A 
Sbjct: 129 SDLAAGQVSLASPVARALLGGRVGDEVRLLTPAGAEM-IEILRIAYPAPAE 178


>UniRef50_Q9JVD0 Transcription elongation factor greB n=64 Tax=Bacteria
           RepID=GREB_NEIMA
          Length = 163

 Score = 92.5 bits (229), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 29/134 (21%), Positives = 48/134 (35%), Gaps = 11/134 (8%)

Query: 2   SRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPE-EMPHD 52
            RP I+     A       E   Y                L   L+ A +  PE     D
Sbjct: 28  ERPEIVQIVNWAAGNGDRSENGDYLYGKRRMREIDRRIRFLTKRLEAAVVVDPELREATD 87

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V   + V      DG  +   +V   ++  +  ++S ++P+   L+  R GD +    P
Sbjct: 88  QVFFGATVGLL-RGDGREQTVKIVGIDEIDTAQNKISWISPLARCLIKAREGDEVVLNTP 146

Query: 113 GGVATHLEVLELEY 126
            G    +E+L +EY
Sbjct: 147 EGRE-EIEILSVEY 159


>UniRef50_Q2N9J5 Transcription elongation factor n=2 Tax=Erythrobacter
           RepID=Q2N9J5_ERYLH
          Length = 159

 Score = 92.5 bits (229), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 40/107 (37%), Gaps = 3/107 (2%)

Query: 21  EQPAYAGLPIADALNAELDRAQMCSPEEMPH-DVVTMNSRVKFRNLSDGEVRVRTLVYPA 79
            +           L   +  A++  P E P  D     + +   +  D   +  TLV   
Sbjct: 54  RKRMREIDRELAHLARRMKHARVIEPSEQPDKDRAFFGATLTLADEDD-ARKTVTLVGDD 112

Query: 80  KMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
           +   S  ++   +P+  AL G RVGD     LP G     EV+ + Y
Sbjct: 113 EQDASAGKIGWSSPLARALRGARVGDLRTVHLPSGE-REWEVMAIAY 158


>UniRef50_C5BTE2 Transcription elongation factor GreA n=1 Tax=Teredinibacter
           turnerae T7901 RepID=C5BTE2_TERTT
          Length = 126

 Score = 92.5 bits (229), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 37/108 (34%)

Query: 17  DILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLV 76
             L    +      A  L   L  A +   +++    V   S V   ++ + E +   +V
Sbjct: 15  RELEANLSSLPDTDAAELRTRLASATVVDNDDIMGGRVQFGSLVTVFSIDEEEEQSFQIV 74

Query: 77  YPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
              +       L   +P+  AL G R G+ +   L  G     EV  +
Sbjct: 75  SSDESLSGRGLLDQRSPLAQALFGAREGEVVRVLLQNGSNCDYEVTHI 122


>UniRef50_Q4K5S3 Transcription elongation factor GreB n=3 Tax=Pseudomonas
           RepID=Q4K5S3_PSEF5
          Length = 197

 Score = 91.7 bits (227), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 46/109 (42%), Gaps = 3/109 (2%)

Query: 17  DILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLV 76
           D   +Q               L  AQ+ +      D V + SRV F +  D   +   LV
Sbjct: 90  DDADKQRMAELERDLRYFTQRLHSAQVVTTAN-STDKVQIGSRVTFADEQD-RQQSVQLV 147

Query: 77  YPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
              +   +   ++  +P+G ALLG + GD + W+ P G    +E++ +E
Sbjct: 148 GEDQADAAKGLINWASPLGRALLGAQPGDEVLWQRPAGNQL-IEIIRIE 195


>UniRef50_A9BFC0 Transcription elongation factor greA n=12 Tax=Thermotogaceae
           RepID=GREA_PETMO
          Length = 159

 Score = 91.7 bits (227), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 52/123 (42%), Gaps = 9/123 (7%)

Query: 12  DAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPE-EMPHDVVTMNSRVKF 62
           +A  +  L E   Y                ++  LD A++        +  V++  +VK 
Sbjct: 37  EARELGDLSENSEYEEAKNEQGMIDSRIKEIDYILDNAEIIENGGNHDNSTVSLGKKVKI 96

Query: 63  RNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVL 122
           ++      +   LV P +      ++S+ +P+G +LLG + G+ I+ +   G +  +E+ 
Sbjct: 97  KDYRLNREQEFVLVTPQEANIEENKISIESPIGRSLLGRKKGEVINIKTARGSSKKIEIK 156

Query: 123 ELE 125
           E+ 
Sbjct: 157 EIS 159


>UniRef50_B2S1W7 Transcription elongation factor greA n=6 Tax=Treponema
           RepID=GREA_TREPS
          Length = 162

 Score = 91.7 bits (227), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 25/119 (21%), Positives = 49/119 (41%), Gaps = 9/119 (7%)

Query: 15  RIDILLEQPAYAGLPIAD--------ALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLS 66
            +  L E   Y                L  E++RAQ+  P  +    V+  + +  +N +
Sbjct: 41  ELGDLRENAEYKAAREEQTRLNNMVTRLQEEIERAQVFDPTTVVAGRVSFGTVISLKNHT 100

Query: 67  DGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
            GE    T++ P +       +S M+P+G+ LL  + G+ + + + G      E+L + 
Sbjct: 101 SGEDETYTILGPWESAPERGIISYMSPLGSNLLNRKTGEQLAFTV-GEHEKVYEILSIS 158


>UniRef50_B4UMG4 GreA/GreB family elongation factor n=4 Tax=Anaeromyxobacter
           RepID=B4UMG4_ANASK
          Length = 169

 Score = 91.4 bits (226), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 33/116 (28%), Positives = 43/116 (37%), Gaps = 3/116 (2%)

Query: 12  DAERIDILLEQPAYAG-LPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEV 70
           DA R+                 AL+A L    +  PE  P   V   + V      DG  
Sbjct: 52  DAARLPDAERPARLGELDARIAALDATLGALTVLGPEATPEGQVGFGTWVTVE-EEDGRR 110

Query: 71  RVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
               LV P +       +S  +PV  ALLG R GD +    PGG A  L V+ +  
Sbjct: 111 VTWRLVGPDEADARRGLISAGSPVARALLGRRAGDVVEVNRPGGEA-ELTVVAVRR 165


>UniRef50_B4D5K0 GreA/GreB family elongation factor n=1 Tax=Chthoniobacter flavus
           Ellin428 RepID=B4D5K0_9BACT
          Length = 169

 Score = 91.4 bits (226), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 44/111 (39%), Gaps = 2/111 (1%)

Query: 17  DILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLV 76
             +             AL+  L  A++ +  E   D V     V  R+ + G      +V
Sbjct: 60  GEISRDELRRVTSRMQALSQRLADAEVIAISESRGDEVRFGMFVTIRD-AGGVEDEYRIV 118

Query: 77  YPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQ 127
              ++      +S ++P+  A++G ++GD + ++ P G    L ++ +   
Sbjct: 119 GVDEVDLEAGWISWLSPLAQAIVGRKIGDVVQFQAPAGE-KKLHIVAVRPP 168


>UniRef50_B2V1C0 Transcription elongation factor n=28 Tax=Clostridium
           RepID=B2V1C0_CLOBA
          Length = 155

 Score = 91.4 bits (226), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 29/134 (21%), Positives = 54/134 (40%), Gaps = 9/134 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAG--------LPIADALNAELDRAQMCSPEEMPHD 52
           + R  I    L A       E   Y                L   +  A +    E+   
Sbjct: 23  VKRAEIAKEKLVAAAHGDRSENAEYKEACANYRENDNRIQYLMTMISTATVIDDTEIDKS 82

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            + +NS+ + + + D +  V TLV    +   N  +S+ + +G AL+G + G+++  E P
Sbjct: 83  SLGINSKARIKFVEDDDEDVITLVTTMDLDPENMLISIESDLGKALMGKKAGETVEVEAP 142

Query: 113 GGVATHLEVLELEY 126
            G    +++LE+ Y
Sbjct: 143 -GAKYTVKILEILY 155


>UniRef50_D2QK34 GreA/GreB family elongation factor n=1 Tax=Spirosoma linguale DSM
           74 RepID=D2QK34_9SPHI
          Length = 171

 Score = 91.0 bits (225), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 26/98 (26%), Positives = 46/98 (46%), Gaps = 2/98 (2%)

Query: 30  IADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGE-VRVRTLVYPAKMTDSNTQL 88
              ALN  +  A++ + ++ P D V   + V   + S G+  +  T+V   +    + ++
Sbjct: 73  QIAALNQRIATAKVVNMQDHPLDEVRFGATVTLSSQSTGKADQQLTIVGVDEADAIHGRI 132

Query: 89  SVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
           +  AP+   LLG +VGD I    P G    LE+  + Y
Sbjct: 133 AFPAPIARLLLGKKVGDFITLRTPRGENA-LEITSIYY 169


>UniRef50_Q04UP0 Transcription elongation factor n=6 Tax=Leptospira
           RepID=Q04UP0_LEPBJ
          Length = 927

 Score = 91.0 bits (225), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 29/121 (23%), Positives = 47/121 (38%), Gaps = 9/121 (7%)

Query: 12  DAERIDILLEQPAYAGL--------PIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFR 63
           +A+    L E   Y                L AE+  A +     +  D + +    K +
Sbjct: 798 EAQERGDLRENAEYKAAMERQVQLQAAIKRLEAEIKSAIILDLTNVKTDKINIGVTAKLK 857

Query: 64  NLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLE 123
           N S GEV   +++           +S  +P+  +LLG +VGD+    L  G  T   VLE
Sbjct: 858 NESTGEVVAYSILGAWDADTEKHIISYQSPLAKSLLGKKVGDAAVLNL-TGAETRYTVLE 916

Query: 124 L 124
           +
Sbjct: 917 I 917


>UniRef50_B5Y9H5 Transcription elongation factor n=1 Tax=Coprothermobacter
           proteolyticus DSM 5265 RepID=B5Y9H5_COPPD
          Length = 163

 Score = 91.0 bits (225), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 56/133 (42%), Gaps = 9/133 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIAD-ALNAELDR-------AQMCSPEEMPHD 52
           + R  +     +A  +  L E   +         L   + R       A++   E++  D
Sbjct: 28  VKRKEVAEKIQEARALGDLSENSEFEAAKEEQALLEERIARLETLVYNARVVKAEDLALD 87

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVY-PAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWEL 111
            V++ ++V   + S G      +V    ++   + ++S  +P+G+ LLG + GD +  +L
Sbjct: 88  QVSVGTKVLVLDESAGREESFIIVGNSEEVDPFSGKISSKSPLGSRLLGRKRGDRVEIKL 147

Query: 112 PGGVATHLEVLEL 124
             G     E+L++
Sbjct: 148 RNGSKAVYEILDI 160


>UniRef50_C7T958 Transcription elongation factor n=4 Tax=Lactobacillus rhamnosus
           RepID=C7T958_LACRG
          Length = 165

 Score = 91.0 bits (225), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 31/138 (22%), Positives = 54/138 (39%), Gaps = 13/138 (9%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGL-PIADALNAELDR-------AQMCSPEEMPHDVV 54
           RP  I N  +A  +    E   Y+        L   L         A++ +P     ++ 
Sbjct: 26  RPAKIKNLAEAAALGDRSENAEYSAAKRELRQLEGRLRYLDKLIRYAKVTTPAA--ANLA 83

Query: 55  TMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGG 114
            + + V      D +     LV PA+      +L++ +P+GAA+    VGD++    P G
Sbjct: 84  DIGNWVTLEFDDDQDEDTYELVGPAEAGMGAAKLAINSPLGAAVRRHHVGDTVTVTAPSG 143

Query: 115 VATHLEVLELEYQPEAAG 132
               + V+ +   P A G
Sbjct: 144 TYQ-VTVMAIS--PHAPG 158


>UniRef50_A6NZ08 Transcription elongation factor n=1 Tax=Bacteroides capillosus ATCC
           29799 RepID=A6NZ08_9BACE
          Length = 157

 Score = 91.0 bits (225), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 41/106 (38%), Gaps = 1/106 (0%)

Query: 20  LEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPA 79
            +            +   L+   +   E      V + S++K  ++   E     +V   
Sbjct: 52  AKNEQGKLYSRIAEVENILENCVVIEEEIHDGKTVRLGSKLKVLDVEFNEELDYEVVGSQ 111

Query: 80  KMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
           +    N ++S  +P G ALLG  VG+ +  E P G   H +VL + 
Sbjct: 112 EADPMNGRISEDSPFGRALLGKSVGEDVVVEAPAGA-LHYKVLSIS 156


>UniRef50_C8W826 Transcription elongation factor n=7 Tax=Coriobacteriaceae
           RepID=C8W826_ATOPD
          Length = 159

 Score = 91.0 bits (225), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 18/118 (15%), Positives = 43/118 (36%), Gaps = 7/118 (5%)

Query: 9   NDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDG 68
           ++ DA + +              + +   L  A++          V + + V+  +   G
Sbjct: 49  SEYDAAKEEQ------SHNESRINEIRQILSVAKVVEGGSKRKVTVAIGTTVELADAK-G 101

Query: 69  EVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
           +     +V   +      ++S  +P G AL+G + GD + +  P G      ++ +  
Sbjct: 102 KTTKYVIVGTTETNSLEHKISNESPAGEALIGHKKGDEVEFTTPNGKVKKYTIISITR 159


>UniRef50_B7CAB2 Transcription elongation factor n=5 Tax=Erysipelotrichaceae
           RepID=B7CAB2_9FIRM
          Length = 162

 Score = 91.0 bits (225), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 52/136 (38%), Gaps = 14/136 (10%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPE-----EM 49
           R  +I+   +A     L E   Y                L A +  A++ +       + 
Sbjct: 28  RQEVIVELQEARAQGDLSENADYDAAREHQAQVEGRIRELEAMIKNAEIITESADVEDKK 87

Query: 50  PHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHW 109
             +VV + S VK  +LSD +     +V   +    N +LS   P+   ++  +VGD    
Sbjct: 88  KKNVVKLGSTVKILDLSDNQEVTFNIVGTIEADPFNGKLSNTTPLAEVIMDHKVGDVCTV 147

Query: 110 ELPGGVATHLEVLELE 125
           +        +++LE++
Sbjct: 148 K-RVEEPYDVKILEIK 162


>UniRef50_Q848L1 GreA n=1 Tax=uncultured bacterium RepID=Q848L1_9BACT
          Length = 597

 Score = 90.6 bits (224), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 29/123 (23%), Positives = 46/123 (37%), Gaps = 11/123 (8%)

Query: 14  ERIDILLEQPAYAGLPIADA--LNAELDR-------AQMCSPEEMPHDVVTMNSRVKFRN 64
           +R D LL  P       ++   L  EL +       A +      P D V   + V   +
Sbjct: 477 QRRDELLASPDDDLPERSELATLERELAQVSAVLQGAIVIRLASPPRDEVRFGAEVVVED 536

Query: 65  LSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
              G      LV   +       ++  +P+G AL G R+G  + W  P G   ++ V E+
Sbjct: 537 -DRGSRSRFQLVGENEAAPERGLVNWFSPLGRALAGARLGQRVEWTTPAGRGAYV-VREI 594

Query: 125 EYQ 127
            Y 
Sbjct: 595 SYP 597


>UniRef50_B0VIH5 Putative transcription elongation factor n=1 Tax=Candidatus
           Cloacamonas acidaminovorans RepID=B0VIH5_9BACT
          Length = 159

 Score = 90.6 bits (224), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 29/136 (21%), Positives = 53/136 (38%), Gaps = 13/136 (9%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHDV 53
            RP +I     A     L E   Y              D L       ++    E P D+
Sbjct: 25  ERPEVIKAVAIAREFGDLSENAEYKAARERQRAIDNEIDYLRRRSANLKVIDTSEFPKDM 84

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSN----TQLSVMAPVGAALLGLRVGDSIHW 109
           V   +     +++  E     LV P ++   N     ++S+++P+G ALL  ++G+    
Sbjct: 85  VRFGTYCVAEDINTKECICYHLVGPEELNYYNEEGIQEVSIVSPIGKALLSKKIGEIAIV 144

Query: 110 ELPGGVATHLEVLELE 125
           + P G    L++ E++
Sbjct: 145 KAPIGE-RKLKIREIK 159


>UniRef50_A0LES5 GreA/GreB family elongation factor n=1 Tax=Syntrophobacter
           fumaroxidans MPOB RepID=A0LES5_SYNFM
          Length = 155

 Score = 90.6 bits (224), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 41/106 (38%), Gaps = 1/106 (0%)

Query: 19  LLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYP 78
           L  +           L  +L   ++    +         + V  +N+  GE +   LV P
Sbjct: 49  LARERHMVLQKKIQDLERKLASCEIVVGRKFFFKQAEFGTIVVIQNIETGETQRYQLVGP 108

Query: 79  AKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
            +    + +LS+ +PVG  L+G R G+ +    P G      V+ +
Sbjct: 109 YESNVVDGKLSIDSPVGRHLVGRREGEEVLVYTPAG-VRMYRVVSI 153


>UniRef50_Q0B0N4 Transcription elongation factor greA n=6 Tax=Clostridia
           RepID=GREA_SYNWW
          Length = 159

 Score = 90.6 bits (224), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 51/106 (48%), Gaps = 1/106 (0%)

Query: 20  LEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPA 79
            +           +L   L +A++   E++  DVV++ SR+  + +  G     TLV   
Sbjct: 54  AKNEQAFIEGRIISLEKTLKKARLMEDEDIRTDVVSLGSRITLKEMKSGREVTVTLVSSV 113

Query: 80  KMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
           +    + ++S  +PVG A++G +V  ++  E P G     +++++E
Sbjct: 114 ESKLKDGKISDESPVGKAIMGKKVKSTVSVEAPAGTI-KYKIIKVE 158


>UniRef50_B0P8A6 Transcription elongation factor n=1 Tax=Anaerotruncus colihominis
           DSM 17241 RepID=B0P8A6_9FIRM
          Length = 151

 Score = 90.2 bits (223), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 53/116 (45%), Gaps = 7/116 (6%)

Query: 9   NDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDG 68
           ++ D  + +  + +           L  +L   ++   +++  DVV++ SRVK  ++   
Sbjct: 41  SEYDEAKNEQAVVEAR------IKKLEDQLKHVKIIERDQISTDVVSVGSRVKILDMDYD 94

Query: 69  EVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
           E  V T+    +  +    +S  +PVG  L+G +VGD +    P      L++LE+
Sbjct: 95  EEMVYTIASSVESHNDLESISDESPVGKGLIGHKVGDVVEIHAPA-AVLKLKILEI 149


>UniRef50_B9L0L0 Transcription elongation factor greA n=1 Tax=Thermomicrobium roseum
           DSM 5159 RepID=GREA_THERP
          Length = 156

 Score = 90.2 bits (223), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 34/133 (25%), Positives = 53/133 (39%), Gaps = 12/133 (9%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCS-PEEMPHD 52
            RP I     +A     + E  AY                +   L R ++   P +    
Sbjct: 27  RRPEIARVIQEAREHGDIRENAAYDAAKHDQAFIEGRIREIEELLKRVELIEQPTDGDRS 86

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
           VV + S V      DGE+   T+V   +   S  ++S  +PVG ALLG R G+ +  E P
Sbjct: 87  VVRVGSTVTIEI--DGEIETYTIVGAIEAKPSAGRISNESPVGRALLGHRAGEIVPIETP 144

Query: 113 GGVATHLEVLELE 125
            G      ++E++
Sbjct: 145 NGTLM-ARIIEVQ 156


>UniRef50_B3DVF3 Transcription elongation factor GreA fused to uncharacterized
           associated domain n=1 Tax=Methylacidiphilum infernorum
           V4 RepID=B3DVF3_METI4
          Length = 614

 Score = 89.8 bits (222), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 45/135 (33%), Gaps = 11/135 (8%)

Query: 3   RPTIIINDLDAERID---ILLEQPAYAGLPIAD--------ALNAELDRAQMCSPEEMPH 51
           R  I  N  D         L E   Y                L + + RA+      +  
Sbjct: 472 RKKIPENSKDIAHARSYGDLRENHEYKAAKEMQVVLMRRKAELESMISRARATDFSNVDT 531

Query: 52  DVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWEL 111
             V + + V + +L         ++       S   +S +A  G +LLG + GD +   L
Sbjct: 532 TTVNIGTVVSYTDLKTNRTNSVAILGAWDSNPSKGIISYLAAFGQSLLGHKTGDVLQVSL 591

Query: 112 PGGVATHLEVLELEY 126
             G+ T + + ++  
Sbjct: 592 EDGITTEIRIDKISR 606


>UniRef50_D1C6T4 Transcription elongation factor n=1 Tax=Sphaerobacter thermophilus
           DSM 20745 RepID=D1C6T4_SPHTD
          Length = 157

 Score = 89.4 bits (221), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 40/109 (36%), Gaps = 4/109 (3%)

Query: 18  ILLEQPAYAGLPIADALNAELDRAQMCSPEEM-PHDVVTMNSRVKFRNLSDGEVRVRTLV 76
              +            +   L RA++          VV + S V      DG     T+V
Sbjct: 51  DAAKHDQAFIEGRIREIEDILRRAEVIDEAPNGDARVVRLGSTVTIEI--DGAQETYTIV 108

Query: 77  YPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
              +   +  ++S  +P G ALLG R G+ +  + P     H  ++ +E
Sbjct: 109 GAVEAKPAAGRISNESPFGRALLGHREGEEVEIQTPA-AVLHARIVNVE 156


>UniRef50_D1CDC6 Transcription elongation factor n=1 Tax=Thermobaculum terrenum ATCC
           BAA-798 RepID=D1CDC6_THET1
          Length = 159

 Score = 89.4 bits (221), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 28/109 (25%), Positives = 45/109 (41%), Gaps = 6/109 (5%)

Query: 20  LEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPA 79
            +            L   L  A++      P   V + S+V      +G     T+V  A
Sbjct: 54  AKHSQAFLEGRIKELEKLLANAEVIDRSAQPAGTVGLGSKVTVE--ENGRTYTYTIVDGA 111

Query: 80  KMTDSNT---QLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
           +         ++S  + VG+ALLG RVGDS+  E+P G     ++L +E
Sbjct: 112 EAGRGRDGEVRISSKSAVGSALLGRRVGDSVEVEVPAG-KLTFKILSVE 159


>UniRef50_Q88ZS9 Transcription elongation factor greA 1 n=7 Tax=Lactobacillus
           RepID=GREA1_LACPL
          Length = 156

 Score = 89.4 bits (221), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 45/118 (38%), Gaps = 14/118 (11%)

Query: 9   NDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDG 68
              D  R++  L             LN +L  AQ+  P +  +D + +   V    L D 
Sbjct: 52  AKRDLGRLESRL-----------RYLNKQLQYAQIVQPAD--NDQLDIGKFVTIEFLDDH 98

Query: 69  EVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
           +     LV   +      ++S  +P+G AL    V D +    P G    ++V+ ++ 
Sbjct: 99  DQITYQLVGKQEANLEQQKISFTSPIGQALANHTVDDVVTVNAPNGAYQ-VKVIAVKR 155


>UniRef50_B1XUH7 Transcription elongation factor GreB n=2 Tax=Polynucleobacter
           necessarius RepID=B1XUH7_POLNS
          Length = 168

 Score = 89.4 bits (221), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 47/113 (41%), Gaps = 9/113 (7%)

Query: 22  QPAYAGLPIADALNAELDRAQMCSPE-----EMPHDVVTMNSRVKF---RNLSDGEVRVR 73
           +           LN  L+ A +         E   D V   + V +        G+    
Sbjct: 54  KRLREIDRRIRFLNKRLEFAIVVDNSARKSGENDADQVFFGASVTYSALEGPEAGKRTSI 113

Query: 74  TLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
           T+V   ++    + +S ++P+  AL+  R+GD +  + P G  T +E+L+++Y
Sbjct: 114 TIVGVDEVDLDKSHVSWVSPIAKALIKSRIGDCVFIQTPTG-PTEIEILDVQY 165


>UniRef50_D0WJ76 Transcription elongation factor n=1 Tax=Slackia exigua ATCC 700122
           RepID=D0WJ76_9ACTN
          Length = 161

 Score = 89.1 bits (220), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 3/107 (2%)

Query: 20  LEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPA 79
            +            +N  L  A +    +   + V + S V       G  RV T+V  A
Sbjct: 58  AKNEQGLMEARIAQINDILSNAVLVEAPK-RSNRVNIGSTVTV--DMGGRERVFTIVGAA 114

Query: 80  KMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
           +   S+ ++S  +PVGAALLG + GD    E P G    ++++++E+
Sbjct: 115 EADVSSGKISNESPVGAALLGGKKGDHFTAEGPTGRVIEMDIVKIEH 161


>UniRef50_B0N6V6 Transcription elongation factor n=4 Tax=Bacteria RepID=B0N6V6_9FIRM
          Length = 161

 Score = 89.1 bits (220), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 27/138 (19%), Positives = 54/138 (39%), Gaps = 14/138 (10%)

Query: 1   MSRPTIIINDLDAERID-ILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPH 51
           + RP + I +L   R    L E   Y                ++  L  A++ S E+M  
Sbjct: 26  VERPKV-IEELQLARSQGDLSENADYDAAREKQAHLESRIKEIDYMLQNAEVISEEQMDL 84

Query: 52  DVVTMNSRVKFRN--LSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHW 109
            VV   + V   +    D E     +V   +    N ++S  +P+  A+LG  V + +  
Sbjct: 85  KVVKPGTTVTILDLSEKDAEPESYQIVGYTETDPLNGKISNESPLAKAVLGHGVNEIVTV 144

Query: 110 ELPGGVATHLEVLELEYQ 127
            +       ++++ +E++
Sbjct: 145 GVAD--PYDVKIVNIEFK 160


>UniRef50_A6STV7 Transcription elongation factor GreB n=2 Tax=Oxalobacteraceae
           RepID=A6STV7_JANMA
          Length = 175

 Score = 89.1 bits (220), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 45/108 (41%), Gaps = 3/108 (2%)

Query: 21  EQPAYAGLPIADALNAELDRAQMCSPE-EMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPA 79
           E            L   ++ A++         D +   + V + N + GE    T+V   
Sbjct: 67  EASLREIEQRIHYLQTRVESAEVVDASVHADGDRIFFGASVDYEN-TAGETHTATIVGLD 125

Query: 80  KMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQ 127
           ++  +  ++S ++P+  +LLG   GD++  + P G    L VL + Y 
Sbjct: 126 ELDPAQGRISWLSPLAQSLLGAEEGDTVLLQTPAG-PEELHVLTVRYP 172


>UniRef50_A7HXN3 GreA/GreB family elongation factor n=1 Tax=Parvibaculum
           lavamentivorans DS-1 RepID=A7HXN3_PARL1
          Length = 171

 Score = 88.3 bits (218), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 35/125 (28%), Positives = 61/125 (48%), Gaps = 1/125 (0%)

Query: 7   IINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLS 66
           ++   D  R+++   +      P+   + A+L+ A++ S  E+   V T+ S V++R + 
Sbjct: 26  LLTRHDFARLELACFEQLDLLNPMQPFVRAKLEEARIVSGNEIAETVATLGSIVRYR-IE 84

Query: 67  DGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
           D  +  R L    +   +   LSV+ P+G ALLG   GD    EL  G    + +  +E+
Sbjct: 85  DRMLERRLLQLDNRHAPNGQYLSVLTPIGLALLGRSTGDLCEAELFNGAKLTIRIALIEH 144

Query: 127 QPEAA 131
           QPEA 
Sbjct: 145 QPEAE 149


>UniRef50_C7N7T1 Transcription elongation factor n=1 Tax=Slackia heliotrinireducens
           DSM 20476 RepID=C7N7T1_SLAHD
          Length = 155

 Score = 87.9 bits (217), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 28/107 (26%), Positives = 46/107 (42%), Gaps = 3/107 (2%)

Query: 20  LEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPA 79
            +            +N  L  A +    +   + VT+ S V       G  RV T+V  A
Sbjct: 52  AKNEQGMLEVRIAQINDILANATVVEAPK-RSNRVTVGSTVTV--DMGGRERVFTIVGGA 108

Query: 80  KMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
           +   +  ++S  +PVG+ LLG + GD +  E P G    + VL +E+
Sbjct: 109 EANAAEGKISNDSPVGSVLLGSKKGDQLTTEGPTGRKIEITVLNIEH 155


>UniRef50_B3PM73 Transcription elongation factor greA n=1 Tax=Mycoplasma arthritidis
           158L3-1 RepID=GREA_MYCA5
          Length = 159

 Score = 87.9 bits (217), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 48/131 (36%), Gaps = 11/131 (8%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPH-DV 53
           RP +I    +A     L E   Y                +   LD  ++   +      V
Sbjct: 30  RPQVIEEIKEARNQGDLSENAEYDAARDKQATIENEITEIQHILDNYEIIKTQTNRQVSV 89

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           V + S V   +L D  V    +V        N ++S  +P+  A++G + G+ +  E P 
Sbjct: 90  VRIGSNVSVVSLKDDTVINFQIVGALDTDPFNGKISNTSPLAKAVIGRKAGEVVEVEAPN 149

Query: 114 GVATHLEVLEL 124
                ++++ +
Sbjct: 150 --KYQVKIVHV 158


>UniRef50_UPI0001746370 transcript cleavage factor/unknown domain fusion protein n=1
           Tax=Verrucomicrobium spinosum DSM 4136
           RepID=UPI0001746370
          Length = 627

 Score = 87.9 bits (217), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 21/100 (21%), Positives = 43/100 (43%), Gaps = 3/100 (3%)

Query: 35  NAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPV 94
             EL RA+      +  + V + + V  +++  G+   +T++         + LS ++ +
Sbjct: 524 ERELRRARGTDFVGVSTETVGIGTIVDLQDVGTGKTETQTILGAWDGDPDQSILSYLSEM 583

Query: 95  GAALLGLRVGDSIHWELPGGVATHLEVLELEY---QPEAA 131
             AL+G RVGD             ++++ +     Q EAA
Sbjct: 584 AKALIGKRVGDEAELPTDTHGTRKVKIVSIRPYRTQAEAA 623


>UniRef50_C4ZAT8 Transcription elongation factor GreA n=21 Tax=Firmicutes
           RepID=C4ZAT8_EUBR3
          Length = 167

 Score = 87.9 bits (217), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 42/106 (39%), Gaps = 1/106 (0%)

Query: 20  LEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPA 79
            +Q           L   +  A +   +E   D V M + V      D E     +V   
Sbjct: 50  AKQFKNQNESRIRYLEKMIKTAVVI-SDESKDDEVGMFNTVDVYFEDDDETETYKIVTTV 108

Query: 80  KMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
           +       +S  +P+GAA+ G +VGD    ++    +  +++++++
Sbjct: 109 RGNSLKNLISKESPLGAAIFGHKVGDRCEVKVNDDYSYFVKIMKIQ 154


>UniRef50_A7VBG3 Putative uncharacterized protein n=1 Tax=Clostridium sp. L2-50
           RepID=A7VBG3_9CLOT
          Length = 195

 Score = 87.5 bits (216), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 25/105 (23%), Positives = 45/105 (42%), Gaps = 1/105 (0%)

Query: 20  LEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPA 79
            ++   A       L+  +  A++   E    D V +N+ V+     D E     +V   
Sbjct: 80  AKKDKNANEKRIRYLDRMVRTAEIIKDESAD-DEVGLNNTVRVYFEEDEEEDTYRIVTTV 138

Query: 80  KMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
           +    N  +S ++P+G ALLG +VGD +      G   H+ + E+
Sbjct: 139 REDVLNGIISNISPMGKALLGHKVGDRVEVVPGKGDPFHIVIREI 183


>UniRef50_A4E9C2 Transcription elongation factor n=1 Tax=Collinsella aerofaciens
           ATCC 25986 RepID=A4E9C2_9ACTN
          Length = 156

 Score = 87.5 bits (216), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 45/118 (38%), Gaps = 9/118 (7%)

Query: 9   NDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDG 68
           ++ DA +                  + A L  AQ+          V++ S V   +  +G
Sbjct: 48  SEYDAAK------DKQAQNAARIAEIQAILANAQV--AATTGDLTVSIGSTVSLID-PNG 98

Query: 69  EVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
           EV   TLV   +      ++S  +PVG A++G   GDS+    P G      + ++  
Sbjct: 99  EVMEVTLVGTTETNSLEHKISNESPVGHAIIGHGEGDSVEVVTPSGKTRVYTIAKIAR 156


>UniRef50_A6SZ83 Transcription elongation factor, greA family n=2
           Tax=Oxalobacteraceae RepID=A6SZ83_JANMA
          Length = 139

 Score = 87.5 bits (216), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 48/121 (39%), Gaps = 3/121 (2%)

Query: 7   IINDLDAERIDILLEQPAYAGL---PIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFR 63
            +   DA  +  + E     G       + L   +  + +   +      VT+ S V + 
Sbjct: 6   YLTQNDAATLSRIAEHLLRMGEVEINAGEQLIDIISTSIILPVDVQRKGYVTLYSTVSYS 65

Query: 64  NLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLE 123
            +   EVR  T+V P         +S + P+G AL+G +   ++   LP      L++L+
Sbjct: 66  PVDTEEVRKLTIVCPQDANPQLALISALTPIGLALIGRKALTTVEVALPSKRVEKLKILD 125

Query: 124 L 124
           +
Sbjct: 126 V 126


>UniRef50_P47524 Transcription elongation factor greA n=4 Tax=Mycoplasma
           RepID=GREA_MYCGE
          Length = 161

 Score = 87.5 bits (216), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 50/135 (37%), Gaps = 11/135 (8%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHD 52
           + RP II    +A     L E   Y                +   L  A++ S  +    
Sbjct: 26  VKRPEIIRLLQEARDQGDLSENADYDAAKAQQGEIETRIAEIQDILANAKLISDHQAKTK 85

Query: 53  V--VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWE 110
           V  V++ S V+  + S       T+V   +      ++S  +P+  A+ G  +GD     
Sbjct: 86  VTKVSLGSTVEIYDYSSKSNEKYTIVGTLEANPEEHKISNESPLALAIYGRLIGDECDV- 144

Query: 111 LPGGVATHLEVLELE 125
           +   V   +++L++ 
Sbjct: 145 VGIEVPYRVKILKIS 159


>UniRef50_Q2G8D8 GreA/GreB family elongation factor n=4 Tax=cellular organisms
           RepID=Q2G8D8_NOVAD
          Length = 182

 Score = 87.5 bits (216), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 33/138 (23%), Positives = 48/138 (34%), Gaps = 12/138 (8%)

Query: 2   SRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEM-PHD 52
            RP I+     A       E   Y                L   +  +++  P       
Sbjct: 48  ERPAIVEIVSWAAGNGDRSENGDYLYGRKRMREIDRELAFLARRMKASRVVDPARQEDRS 107

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V   + V+  +  D   +V TLV   +   S   +   AP+  AL G RVGD     LP
Sbjct: 108 RVLFGATVEIADEDDNR-KVLTLVGDDEQDASKGLIGWSAPIAKALRGSRVGDLRIVRLP 166

Query: 113 GGVATHLEVLELEYQPEA 130
            G     E++ + Y PEA
Sbjct: 167 SG-QKEWEIMAISY-PEA 182


>UniRef50_B1ZZX3 GreA/GreB family elongation factor n=3 Tax=Verrucomicrobia
           RepID=B1ZZX3_OPITP
          Length = 616

 Score = 87.1 bits (215), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 45/109 (41%), Gaps = 1/109 (0%)

Query: 18  ILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVY 77
            + +Q     +     L  +L RA++   ++   D V++ + V+  ++ DG     T++ 
Sbjct: 503 KMAKQEQQVLMAHKTNLERDLGRARISDFKDASIDQVSVGTVVEVASVKDGHHTTYTVLG 562

Query: 78  PAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
                     +S   P GAALLG + GD I+ +          ++ +  
Sbjct: 563 AWDGDPEKHFISYKTPFGAALLGKKTGDVINVKT-DASDEDYAIVSIAR 610


>UniRef50_C4L6P4 GreA/GreB family elongation factor n=1 Tax=Exiguobacterium sp. AT1b
           RepID=C4L6P4_EXISA
          Length = 152

 Score = 86.7 bits (214), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 30/106 (28%), Positives = 46/106 (43%), Gaps = 3/106 (2%)

Query: 20  LEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPA 79
             +           LN  LD A +     +  +VVT  +RV  R +   E     +V  A
Sbjct: 49  AVRQYERIEADILELNHLLDDATIVES--VQSEVVTFGNRVVIREVQQEETERYRIVSEA 106

Query: 80  KMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
           +       +SV +P+G  L+G  +G +I  E PGG    +EVL +E
Sbjct: 107 EADLERGSISVTSPLGRRLMGATMGQTIQVETPGGTIQ-VEVLHIE 151


>UniRef50_D1R523 Putative uncharacterized protein n=1 Tax=Parachlamydia
           acanthamoebae str. Hall's coccus RepID=D1R523_9CHLA
          Length = 731

 Score = 86.7 bits (214), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 49/120 (40%), Gaps = 10/120 (8%)

Query: 10  DLDAER-IDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           +++A R +  L E   Y                L+ +L+RA++ + +++  + V++ S V
Sbjct: 608 EIEAARSLGDLRENSEYKFALEKRSRLQGELKRLSEQLNRARIITKDDIYLNQVSVGSIV 667

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
           +  +     V   T++ P         LS  +    A+LG +VG+   +         ++
Sbjct: 668 ELEDPEKN-VVTYTILGPWDADADTNILSFQSKFAEAMLGRKVGEEFEFRNQNFTIRTIK 726


>UniRef50_C6B1R3 GreA/GreB family elongation factor n=16 Tax=cellular organisms
           RepID=C6B1R3_RHILS
          Length = 160

 Score = 86.7 bits (214), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 32/119 (26%), Positives = 47/119 (39%), Gaps = 10/119 (8%)

Query: 10  DLDAER-IDILLEQPAYAGLP--IADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLS 66
             DA   I+ + E+   A  P      L A L  AQ+  P     D V   S V FR   
Sbjct: 49  AYDAASPIEDVNERRRQAASPLRDLRYLTARLRTAQLM-PSPTSIDTVAFGSTVTFR-RD 106

Query: 67  DGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
           DG V+   +V   +       +S ++PV   L+G  VGD +           LE++ + 
Sbjct: 107 DGRVQTYRIVGEDEADPKAGSISYVSPVARLLMGKAVGDMVE-----TGGQELEIIAIA 160


>UniRef50_B1ZQE9 GreA/GreB family elongation factor n=1 Tax=Opitutus terrae PB90-1
           RepID=B1ZQE9_OPITP
          Length = 166

 Score = 86.7 bits (214), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 25/98 (25%), Positives = 40/98 (40%), Gaps = 2/98 (2%)

Query: 28  LPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQ 87
              A  L   L  A++ S       +V   ++V  +   DG      +V   +       
Sbjct: 71  DERARELQQILATAEIISSPAPDRSIVRFGAKVTVK-EEDGTTSTYRIVGIDETEFYTGG 129

Query: 88  LSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
           +S  +P+  ALLG  VGD I ++ P G    LE+  +E
Sbjct: 130 ISFQSPLAQALLGASVGDRIQFQSPAG-PRQLEIQLIE 166


>UniRef50_B1I1G7 GreA/GreB family elongation factor n=1 Tax=Candidatus Desulforudis
           audaxviator MP104C RepID=B1I1G7_DESAP
          Length = 154

 Score = 86.4 bits (213), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 20/100 (20%), Positives = 42/100 (42%), Gaps = 1/100 (1%)

Query: 28  LPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQ 87
               + +   L RA++   +  P  +  +   ++  +L  G   +  +V P ++  +   
Sbjct: 54  DDYLNRVRELLARARVVEGQCPPLPLTLIGCDIRVEDLDRGHSEMFRVVSPYEINPAAGH 113

Query: 88  LSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQ 127
           +S ++PVG  LL    G  +  + PGG      V+ + Y 
Sbjct: 114 VSFLSPVGRGLLLKEPGQVLAVQAPGGTFR-YRVVSVTYP 152


>UniRef50_B9XT30 GreA/GreB family elongation factor n=1 Tax=bacterium Ellin514
           RepID=B9XT30_9BACT
          Length = 606

 Score = 86.4 bits (213), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 43/105 (40%), Gaps = 1/105 (0%)

Query: 20  LEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPA 79
            ++     +     L +EL RA+         D V++ + VK  +L+   +    ++   
Sbjct: 497 AKEMQKILMRRKAELESELVRARGTDYLNPKTDAVSIGTIVKVTDLNSSHIEHFNILGAW 556

Query: 80  KMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
                   +S +AP+  +LL  + G+ + +E+  G      + E+
Sbjct: 557 DSDPEKNVISYLAPLAQSLLNRKPGEEVDYEM-DGQKRRFRIDEI 600


>UniRef50_UPI00017427C8 transcription elongation factor GreA n=1 Tax=candidate division TM7
           single-cell isolate TM7a RepID=UPI00017427C8
          Length = 151

 Score = 86.4 bits (213), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 26/132 (19%), Positives = 49/132 (37%), Gaps = 13/132 (9%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHDV 53
            R  I     +A     L E   Y                +   L  A + +        
Sbjct: 25  RRGEIAEKIAEARDYGDLSENAEYDAAREEQGIVETRIAEIENILQNAAIITGGV--SGQ 82

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           V + S V+   ++  +  V T+V P +      ++S  +P+GAAL+G +V D +    P 
Sbjct: 83  VGLGSVVEL--MTGSKTAVYTVVGPVEADPLEGKVSNESPIGAALMGKKVDDIVEINTPK 140

Query: 114 GVATHLEVLELE 125
           G     +++ ++
Sbjct: 141 G-KLEYKIISIK 151


>UniRef50_B9KMW2 Transcription elongation factor n=3 Tax=Rhodobacter sphaeroides
           RepID=B9KMW2_RHOSK
          Length = 164

 Score = 86.0 bits (212), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 27/114 (23%), Positives = 43/114 (37%), Gaps = 2/114 (1%)

Query: 14  ERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVR 73
            R D L   P  A       L A +  A +  P   P D V     V   +   G   V 
Sbjct: 52  AREDRLDRLPEAAAERDIRYLEARIASAILVDPAAQPLDEVAFGLAVTVED-EAGRRTVW 110

Query: 74  TLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQ 127
            +    +   +  +++  AP+  AL+G R+G+ + W  P G    L V  + + 
Sbjct: 111 EITGEDEAQATARRIAPQAPLARALMGARLGEKVVWTRPAGE-VTLTVTGIAHP 163


>UniRef50_D0KZQ0 Transcription elongation factor GreB n=1 Tax=Halothiobacillus
           neapolitanus c2 RepID=D0KZQ0_HALNC
          Length = 175

 Score = 86.0 bits (212), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 25/141 (17%), Positives = 49/141 (34%), Gaps = 13/141 (9%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMPHD 52
           + R  ++    +A  +    E   Y                L   L   ++        +
Sbjct: 24  VERRLVVQAVSEAAALGDRSENAEYIYGKRRLREIDRRIRYLQKRLGDIKVVRQPPTDMN 83

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V   +R+      D   +   LV P ++  +N  +S+ +P+  A+LG  +   +   LP
Sbjct: 84  KVYFGARITLLYADD-REQTVCLVGPDEIDPANQLISIDSPLAKAVLGKALDAEVVLFLP 142

Query: 113 GG----VATHLEVLELEYQPE 129
                    H E++ +EY  E
Sbjct: 143 SETSTPRRVHAEIIAIEYPSE 163


>UniRef50_A6X2G5 GreA/GreB family elongation factor n=2 Tax=Ochrobactrum
           RepID=A6X2G5_OCHA4
          Length = 156

 Score = 86.0 bits (212), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 52/125 (41%), Gaps = 9/125 (7%)

Query: 6   IIINDLDAERIDI-LLEQPAYAGLPIADALNAEL-------DRAQMCSPEEMPHDVVTMN 57
           + + + +  R+   L +            ++ +L       + A++  P     DVV   
Sbjct: 33  LTMIEDEIARLQRELADANVAGERSAIARISRDLRYWTTRRENAELSVP-VPDSDVVRFG 91

Query: 58  SRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVAT 117
             V+  NL DG+VR  T+V   +   SN ++S +APV   L G  VGD +          
Sbjct: 92  MTVELENLDDGKVRRWTIVGEDEADPSNGKISHVAPVAILLFGKPVGDVVKINNVEWEIV 151

Query: 118 HLEVL 122
            L+++
Sbjct: 152 SLKIV 156


>UniRef50_B9J7D6 Transcription elongation factor protein n=52
           Tax=Alphaproteobacteria RepID=B9J7D6_AGRRK
          Length = 160

 Score = 85.6 bits (211), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 25/105 (23%), Positives = 39/105 (37%), Gaps = 7/105 (6%)

Query: 21  EQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAK 80
            + A   L     L   +  AQ   P     D+V   S V F +  DG V+   +V   +
Sbjct: 63  RRQAAGPLRDLRYLAERIRTAQPI-PAPASIDIVAFGSTVTF-SRDDGRVQTYRIVGEDE 120

Query: 81  MTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
                  +S ++PV   L+G  VGD             LE++ + 
Sbjct: 121 ADPKTGSISFVSPVAKLLMGKSVGDVASV-----GDQELEIIAIA 160


>UniRef50_Q5SJG6 Anti-cleavage anti-GreA transcription factor Gfh1 n=6
           Tax=Thermaceae RepID=Q5SJG6_THET8
          Length = 156

 Score = 85.2 bits (210), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 31/118 (26%), Positives = 52/118 (44%), Gaps = 6/118 (5%)

Query: 10  DLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGE 69
           D D   ++   +Q         D+L   L RA +        +V+ + S V+  +   GE
Sbjct: 42  DYDDSGLEA-AKQEKARIEARIDSLEDILSRAVILEEG--SGEVIGLGSVVELEDPLSGE 98

Query: 70  VRVRTLVYPAKMTDSNT--QLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
                +V PA+    +T  ++S  +P+G ALLG RVGD +  + P G      V+ + 
Sbjct: 99  RLSVQVVSPAEANVLDTPMKISDASPMGKALLGHRVGDVLSLDTPKGR-REFRVVAIH 155


>UniRef50_Q2SSM5 Transcription elongation factor greA n=6 Tax=Mollicutes
           RepID=GREA_MYCCT
          Length = 157

 Score = 85.2 bits (210), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 22/134 (16%), Positives = 54/134 (40%), Gaps = 10/134 (7%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEM-PH 51
           ++RP +I   ++A     L E   Y                +   ++RA++    +    
Sbjct: 25  VTRPKVIEELVEARNQGDLSENADYDAARNRQAEVEARIKEVETLINRAKVIDNSKTHST 84

Query: 52  DVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWEL 111
             V + S V+F +  D + +   +V   +    +  +S  +P+  A+LG ++GD++  + 
Sbjct: 85  GEVKIGSTVEFLSSLDHKTKEIKIVGAIEADPFSRLISNESPIAKAILGKKIGDTVEIKD 144

Query: 112 PGGVATHLEVLELE 125
                  + +  ++
Sbjct: 145 IL-KPYKITIKSIK 157


>UniRef50_A5D4X0 Putative uncharacterized protein n=1 Tax=Pelotomaculum
           thermopropionicum SI RepID=A5D4X0_PELTS
          Length = 150

 Score = 84.4 bits (208), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 26/98 (26%), Positives = 44/98 (44%), Gaps = 1/98 (1%)

Query: 28  LPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQ 87
                 L+  +  A      +     VT+ S V+ +NLS+ EV    +V P         
Sbjct: 48  ENYIQRLDRLIRNASKSKIADNKVPFVTIGSEVEIQNLSEQEVYKYFIVNPFYSEVREGH 107

Query: 88  LSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
           +S ++PVG +LL  +VGD +  + PGGV    ++  + 
Sbjct: 108 ISFLSPVGKSLLLKKVGDEVEVKAPGGVFR-YKIKSIR 144


>UniRef50_A9NGN4 Transcription elongation factor greA n=7 Tax=Acholeplasmataceae
           RepID=GREA_ACHLI
          Length = 158

 Score = 84.0 bits (207), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 18/117 (15%), Positives = 43/117 (36%), Gaps = 7/117 (5%)

Query: 9   NDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDG 68
            D DA R +                + + L   ++    +     V +  +V    +   
Sbjct: 49  ADYDAARNEQ------ARIEARILEIESILKNVKIIRTND-DSTTVNIGKKVLLHFVEKN 101

Query: 69  EVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
           +     +V   +    N ++S+ +P+G A+ G  VGD +  +      +++E+  + 
Sbjct: 102 KDVEYHVVGTIEADPKNFKISIESPLGRAIKGKEVGDLVQIKSATNKQSNVEIKAIS 158


>UniRef50_Q88Q22 Transcription elongation factor, putative n=11 Tax=Pseudomonas
           RepID=Q88Q22_PSEPK
          Length = 165

 Score = 83.7 bits (206), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 3/103 (2%)

Query: 22  QPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKM 81
           Q            +A +  AQ+  P    H  V + SRV+F +  D + +V  LV   + 
Sbjct: 62  QRLADTERDLRYFSARVQSAQVV-PAATSHSKVQIGSRVRFVDAQD-QEQVVQLVGEDEA 119

Query: 82  TDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
              +  ++  +P+G ALLG   GD + W  P G    +EV+E+
Sbjct: 120 DAGHGLINWGSPLGRALLGAGPGDEVVWRRPVGEQV-IEVVEI 161


>UniRef50_Q6MF39 Putative uncharacterized protein n=1 Tax=Candidatus Protochlamydia
           amoebophila UWE25 RepID=Q6MF39_PARUW
          Length = 723

 Score = 83.7 bits (206), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 24/125 (19%), Positives = 52/125 (41%), Gaps = 15/125 (12%)

Query: 10  DLDAER-IDILLEQPAYAGLPIAD-ALNAELD-------RAQMCSPEEMPHDVVTMNSRV 60
           +++A R +  L E   +         L +EL        RA++ +P+++  D V + S +
Sbjct: 600 EIEAARALGDLRENSEFKFAQERRARLQSELKTLSEQFGRARIITPDDILTDEVGIGSVI 659

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
              +   G+    +++ P         LS+ +    A++G ++GD   ++         +
Sbjct: 660 DLIDSQ-GQKIRYSILGPWDADPEKNILSLNSKFAQAMIGKKIGDQFQFK-----DETFK 713

Query: 121 VLELE 125
           VL L 
Sbjct: 714 VLSLH 718


>UniRef50_B4D3Z7 GreA/GreB family elongation factor n=1 Tax=Chthoniobacter flavus
           Ellin428 RepID=B4D3Z7_9BACT
          Length = 609

 Score = 83.3 bits (205), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 15/106 (14%), Positives = 37/106 (34%), Gaps = 1/106 (0%)

Query: 20  LEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPA 79
            ++              +L +A+           V++ + V  +   DG   V T++   
Sbjct: 501 AKEMQRVLSRRRAETERDLAQARGTDFANPDTAQVSVGTIVTLKETGDGRTDVYTILGAW 560

Query: 80  KMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
                   +S  + +  AL+G + G+ ++     G      + ++E
Sbjct: 561 DGDPDKGIVSYQSALAQALIGHKPGEQVNVPTEHG-DRTARIEKIE 605


>UniRef50_Q9Z7G4 Transcription elongation factor greA n=13 Tax=Chlamydiaceae
           RepID=GREA_CHLPN
          Length = 722

 Score = 82.9 bits (204), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 22/122 (18%), Positives = 49/122 (40%), Gaps = 14/122 (11%)

Query: 12  DAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFR 63
           DA  +  L E   Y                L+ E++RA++ + + +  D V +  +V  +
Sbjct: 599 DARSLGDLRENSEYKFALEKRARLQEEIRVLSEEINRARILTKDLVFTDKVGVGCKVTLK 658

Query: 64  NLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLE 123
               GEV   T++ P      +  LS+ + +   +LG ++ D +  +         ++  
Sbjct: 659 -GDAGEVVEYTILGPWDADPDSCILSLQSKLAQNMLGKKLNDVVILQG-----KEYKISR 712

Query: 124 LE 125
           ++
Sbjct: 713 IQ 714


>UniRef50_B2UNZ9 GreA/GreB family elongation factor n=1 Tax=Akkermansia muciniphila
           ATCC BAA-835 RepID=B2UNZ9_AKKM8
          Length = 615

 Score = 82.5 bits (203), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 39/128 (30%), Gaps = 3/128 (2%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAG--LPIADALNAELDRAQMCSPEEMPHDVVTMNS 58
           +    I   + D        +              L   L  A+             M +
Sbjct: 485 LHNKKISRAEGDLRENGGYQDAKEVEKVLNRRRAELEHALALARGTDFAVTDTSRAAMGT 544

Query: 59  RVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATH 118
           +V  + L+ GE  V T++           +S ++ VG  L G  VGD +      G    
Sbjct: 545 KVTLQPLNGGEPVVYTILGAWDTNPEKHIVSYLSQVGKELTGKSVGDQVKIVPMDGDKKK 604

Query: 119 -LEVLELE 125
              + ++E
Sbjct: 605 VYTITKIE 612


>UniRef50_UPI0001C31C12 transcription elongation factor GreA n=1 Tax=Conexibacter woesei
           DSM 14684 RepID=UPI0001C31C12
          Length = 154

 Score = 81.3 bits (200), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 49/132 (37%), Gaps = 12/132 (9%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIAD--------ALNAELDRAQMCSPEEMPHD 52
           ++R  I      A     L E   Y                L      A +        D
Sbjct: 25  VARREIAARIRTAREWGDLKENAEYHAAKEDQAHLETRILKLRERERNATVTEASS-DVD 83

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
           +V   S V+    + G+    TLV  A+ +  + +LS+ +PV  AL+G R G+ +  + P
Sbjct: 84  IVAFGSTVEVE--TGGKNARYTLVGAAEASARDGKLSIESPVARALIGARAGEDVQVQTP 141

Query: 113 GGVATHLEVLEL 124
            G    L V+ +
Sbjct: 142 SGA-RILRVVRV 152


>UniRef50_C6XVH8 Transcription elongation factor n=1 Tax=Pedobacter heparinus DSM
           2366 RepID=C6XVH8_PEDHD
          Length = 125

 Score = 81.0 bits (199), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 34/122 (27%), Positives = 63/122 (51%), Gaps = 2/122 (1%)

Query: 5   TIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRN 64
           +II++    + +   + +   +     + L  EL  A+    +++P DVVT+N+RV+ + 
Sbjct: 4   SIILSTGIFDLLKDHIRRRKLSKYN-QEKLEQELRNARQILSKDIPADVVTVNTRVRVKE 62

Query: 65  LSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
           L  G     TLV PAK  + +  LS+++P+G A++G   G  + WE+P G      + E+
Sbjct: 63  LETGAEFNYTLVPPAKARNKHNTLSILSPIGVAMVGYSQGSELKWEMPEG-IKAYRIEEV 121

Query: 125 EY 126
             
Sbjct: 122 TR 123


>UniRef50_UPI0001746B72 nucleoside diphosphate kinase regulator protein, putative n=1
           Tax=Verrucomicrobium spinosum DSM 4136
           RepID=UPI0001746B72
          Length = 137

 Score = 80.6 bits (198), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 51/126 (40%), Gaps = 7/126 (5%)

Query: 8   INDLDAERIDILLEQPAYAGLPIADA---LNAELDRAQMC-SPEEMPHDVVTMNSRVKFR 63
           I+  D   +   L+         A     L   L  A++     +    V  + + V+  
Sbjct: 9   ISQSDLHTLRTFLDHDDAFNPLDARERSLLIERLQDAKVFEDESDDEPSVAGLQTLVRVE 68

Query: 64  NLSD--GEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           +LS    +    TLV P +    + Q+S+++P+GAA+ G   G  +  + P G    L V
Sbjct: 69  DLSTSPPDQFDFTLVLPHEANFEDDQISILSPLGAAVFGRSAGTQVVMDSPTGTRRLL-V 127

Query: 122 LELEYQ 127
           L +  +
Sbjct: 128 LAVFRK 133


>UniRef50_B4RDE4 Transcription elongation factor GreA/GreB, family n=1
           Tax=Phenylobacterium zucineum HLK1 RepID=B4RDE4_PHEZH
          Length = 161

 Score = 80.6 bits (198), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/118 (24%), Positives = 44/118 (37%), Gaps = 3/118 (2%)

Query: 8   INDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSD 67
           + DLD        E              A    AQ+        D V   +RV FR    
Sbjct: 41  LADLDQRIAGCEDEAQMAWLRRDQRYWAARRANAQVVE-SPADPDEVAFGTRVTFR-KDG 98

Query: 68  GEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
           G      LV   +   +  +LS +AP+  A++G   G+++  E     A  LE+L +E
Sbjct: 99  GAPETVELVGEDEAEPAQGRLSWVAPLARAMIGAMPGETVELETRT-PAIRLEILAVE 155


>UniRef50_B6BTF1 GreA/GreB family elongation factor n=2 Tax=Betaproteobacteria
           RepID=B6BTF1_9PROT
          Length = 164

 Score = 79.8 bits (196), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 46/129 (35%), Gaps = 8/129 (6%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAG-----LPIADALNAELDRAQMCSPEEMPHDVVTMN 57
           + TI + + + + I  L + P                    + A +    E  ++ V   
Sbjct: 39  KETIHLIETEIKSIKELEDSPENKQNKMKLERDLRYYLKRFETAILIDKHE-ENNKVLFG 97

Query: 58  SRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVAT 117
           + V   +  + E     +V   +      +LS ++P+   L+G  +GD + W+   G   
Sbjct: 98  AHVILID-ENDEAYKFQIVGEDEADIKQNKLSYVSPLAKELIGSLIGDEVVWKRADGNRV 156

Query: 118 HLEVLELEY 126
              +  + Y
Sbjct: 157 VF-IDSINY 164


>UniRef50_B9E669 Transcription elongation factor n=5 Tax=Clostridium
           RepID=B9E669_CLOK1
          Length = 157

 Score = 79.4 bits (195), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 32/126 (25%), Positives = 47/126 (37%), Gaps = 11/126 (8%)

Query: 7   IINDLDAERID-ILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHDVVTMN 57
           I   L A R    L E   Y+               L  +L  A +     +  DV  +N
Sbjct: 32  IKAALKAARAQGDLSENADYSAAKEDQSMTETRIQELEYQLKNAVIIESS-LETDVFDIN 90

Query: 58  SRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVAT 117
                +     EV   TLV   +    N ++S+ +P+G AL  L+VGD      P G   
Sbjct: 91  RTALVKFYDVDEVEEVTLVSSVESDVKNMRISIESPLGKALFRLKVGDKATVISPDG-NY 149

Query: 118 HLEVLE 123
            +EV +
Sbjct: 150 DVEVEK 155


>UniRef50_UPI0000E87FB5 transcription elongation factor GreB n=1 Tax=Methylophilales
           bacterium HTCC2181 RepID=UPI0000E87FB5
          Length = 144

 Score = 79.0 bits (194), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 18/100 (18%), Positives = 41/100 (41%), Gaps = 2/100 (2%)

Query: 28  LPIADALNAELDRAQMCSPEE-MPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNT 86
                 L   ++ A +  P   +    V   + VK  +          +V   ++  +  
Sbjct: 46  DSRIKFLLTAIEDADIVHPSTSIDKKKVYFGANVKLLDEQSKSTLDIRIVGAHEINHNIG 105

Query: 87  QLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
            +S ++P+  AL+G    D I  + P  + T++ +L+++Y
Sbjct: 106 NISWLSPLAKALIGRTSSDLIEVQTPMNIKTYI-ILKVDY 144


>UniRef50_A9KJU6 GreA/GreB family elongation factor n=8 Tax=Clostridiales
           RepID=A9KJU6_CLOPH
          Length = 167

 Score = 78.7 bits (193), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 16/105 (15%), Positives = 41/105 (39%), Gaps = 1/105 (0%)

Query: 20  LEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPA 79
            ++           L   +  A++        D + +N+ V      D E+    L+   
Sbjct: 50  AKKDKNKNEGRIRYLERMIKTAEVIEDHS-SEDEIGINNTVSIYFEEDNEIEKYKLITTV 108

Query: 80  KMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
           +       +S+ +P+G A+LG +V D ++ ++      ++ +  +
Sbjct: 109 RENSLQGLISIESPLGKAILGHKVEDRVYVKVRDDYGYYVIIKAI 153


>UniRef50_Q1IZY0 GreA/GreB family elongation factor n=4 Tax=Deinococci
           RepID=Q1IZY0_DEIGD
          Length = 162

 Score = 78.3 bits (192), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 40/110 (36%), Gaps = 4/110 (3%)

Query: 20  LEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPA 79
            ++         + L   L RA +    E     V + + V   N +  +     +V   
Sbjct: 54  AKREKLNIEARIEELEDTLARATLIEDHEN-AGRVELGAVVTLNNETTKQTMRVQVVSAP 112

Query: 80  KMTDSNT---QLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
           + T       ++S  +PVG  L+G +  ++    L  G      V ++EY
Sbjct: 113 EATVLGGSLPRISEESPVGRQLMGRKKDETFVVNLENGKQVKYRVQDIEY 162


>UniRef50_C1CW74 Putative transcription elongation factor n=1 Tax=Deinococcus
           deserti VCD115 RepID=C1CW74_DEIDV
          Length = 162

 Score = 77.9 bits (191), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/119 (24%), Positives = 45/119 (37%), Gaps = 9/119 (7%)

Query: 9   NDLDAERIDILLEQPAYAGLPIAD------ALNAELDRAQMCSPEEMPHDVVTMNSRVKF 62
              DA  ++      A  G            L   L RA +   E++P   V + S V  
Sbjct: 36  TVDDAMDLENRSLNAAQIGQERIAIEARILELEDVLARAVIVEEEDLPRGQVAVGSVVML 95

Query: 63  RNLSDGEVRVRTLVYPAKMTDSNT---QLSVMAPVGAALLGLRVGDSIHWELPGGVATH 118
            +   G      LV   +++       Q+S  +PVG AL+G R G++   EL  G   +
Sbjct: 96  EDDKHGRQLQVQLVSAVEISAMTEGVTQVSDDSPVGKALMGRREGETFDVELEAGRVQY 154


>UniRef50_B4RBL3 Transcription elongation factor GreA/GreB family n=1
           Tax=Phenylobacterium zucineum HLK1 RepID=B4RBL3_PHEZH
          Length = 131

 Score = 77.5 bits (190), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/115 (25%), Positives = 56/115 (48%), Gaps = 4/115 (3%)

Query: 12  DAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVR 71
           D +R+  +       GL   + L  E++R  + + +++    V +NS V +++L     R
Sbjct: 19  DLKRLRAISLSRQAPGL-GQELLRREVERMAIRAYDDLR--FVRLNSTVTYKDLRTRRRR 75

Query: 72  VRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP-GGVATHLEVLELE 125
           +  +V P        ++S+++P+GAAL+GL  G    W     G    ++VL +E
Sbjct: 76  IVQVVQPEHAHQDENRVSILSPIGAALIGLPEGSVFRWAERIDGATRAVKVLAVE 130


>UniRef50_Q1IXC6 GreA/GreB family elongation factor n=1 Tax=Deinococcus geothermalis
           DSM 11300 RepID=Q1IXC6_DEIGD
          Length = 158

 Score = 76.7 bits (188), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/123 (25%), Positives = 45/123 (36%), Gaps = 8/123 (6%)

Query: 9   NDLDAERIDILLEQPAYAGLPIAD----ALNAELDRAQMCSPEEMPHDVVTMNSRVKFRN 64
              DA  ++    Q A   LP  +     L   L RA +    +     V + S V  R+
Sbjct: 36  TLDDAMDLEDRSFQAAQYDLPTMEARILELEDVLARAVIVEEPQARDGGVALGSVVVLRD 95

Query: 65  LSDGEVRVRTLVYPAKMTDSNT---QLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
                     LV   ++        Q+S  +PVG ALLG R G+S   +L    A    V
Sbjct: 96  EQHDRELRVQLVSAVEVDALAEGATQVSEDSPVGKALLGRRAGESFEVDLGSSRAR-YTV 154

Query: 122 LEL 124
             +
Sbjct: 155 KSI 157


>UniRef50_D2PP26 Transcription elongation factor GreA n=3 Tax=Actinomycetales
           RepID=D2PP26_9ACTO
          Length = 169

 Score = 75.2 bits (184), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 29/136 (21%), Positives = 46/136 (33%), Gaps = 13/136 (9%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAG--------LPIADALNAELDRAQMCSPEEMPHDV 53
           +R  I     +A     L E   Y                L   L RA++         V
Sbjct: 31  ARAEITQRISEARDEGDLKENGGYHAAKDEQGKIEARIRQLEDMLRRARV-GETPKDDGV 89

Query: 54  VTMNSRVKFRNLSDGEVRVRTL----VYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHW 109
           V    +V      D +V    L    +     +      S  +P+GAA++G + GD   +
Sbjct: 90  VEPGMKVSITFAGDDDVETFLLGSRELLALDTSVDIDVYSPQSPLGAAIMGKKKGDKATY 149

Query: 110 ELPGGVATHLEVLELE 125
           E P G    +E++  E
Sbjct: 150 EAPNGKDVTVEIVAAE 165


>UniRef50_C0QME5 GreA2 n=1 Tax=Desulfobacterium autotrophicum HRM2
           RepID=C0QME5_DESAH
          Length = 95

 Score = 74.0 bits (181), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 26/49 (53%), Positives = 35/49 (71%)

Query: 88  LSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQPEAAGDYLL 136
           +S++APVG+ALLGL +GD I W  PGG    + + E+ YQPE +GDY L
Sbjct: 47  ISILAPVGSALLGLSIGDKIEWPKPGGGNLKVRITEIIYQPERSGDYQL 95


>UniRef50_Q9RRW0 Transcription elongation factor n=1 Tax=Deinococcus radiodurans
           RepID=Q9RRW0_DEIRA
          Length = 183

 Score = 73.6 bits (180), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 28/111 (25%), Positives = 42/111 (37%), Gaps = 6/111 (5%)

Query: 20  LEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPA 79
            ++   A     + L  +L RA + +P         + SRV   N+  G      LV  A
Sbjct: 73  AQETLGAVEARIEELEDQLARAVVLAPGAGNDGRAAVGSRVTLLNIGLGRELPLHLVSAA 132

Query: 80  KMTDSNT-----QLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
           +            +S  +PVG ALLG R G+    +L         VL +E
Sbjct: 133 EAAAGPGTSGVALVSTESPVGRALLGRRAGEEFTVDLGR-TQAQYRVLMVE 182


>UniRef50_C1ABM5 Transcription elongation factor GreA n=1 Tax=Gemmatimonas
           aurantiaca T-27 RepID=C1ABM5_GEMAT
          Length = 161

 Score = 73.6 bits (180), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 47/121 (38%), Gaps = 9/121 (7%)

Query: 13  AERIDILLEQPAYAGL-PIADALNAELDRAQM-------CSPEEMPHDVVTMNSRVKFRN 64
           A  +  L E   Y         + A L +              ++P D V + S+V   +
Sbjct: 31  AVELGDLKENSEYKAALERQQFVQARLGQLTQRVTKLANIDITQIPGDRVGLGSKVIVED 90

Query: 65  LSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
           L         LV+       +  +++ +P+G AL G  VG+    +LP      L+++EL
Sbjct: 91  LQSKARETYELVFGDAGELHDGHVTMGSPIGRALQGKSVGEEAILKLPT-RIRKLQIVEL 149

Query: 125 E 125
           +
Sbjct: 150 Q 150


>UniRef50_C0ZE34 Putative uncharacterized protein n=1 Tax=Brevibacillus brevis NBRC
           100599 RepID=C0ZE34_BREBN
          Length = 164

 Score = 72.9 bits (178), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 56  MNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGV 115
           + S VK     D      T+VYP  +   N ++S ++P+G  LL     DS+  E P G 
Sbjct: 86  LGSSVKVLFEEDQFEESFTVVYPTDIDPDNNRISFLSPIGRQLLLAAPHDSVVLESPVGR 145

Query: 116 ATHLEVLELEY 126
              ++V E+ +
Sbjct: 146 QQ-VQVREISF 155


>UniRef50_Q930S1 Putative uncharacterized protein n=1 Tax=Sinorhizobium meliloti
           RepID=Q930S1_RHIME
          Length = 183

 Score = 72.9 bits (178), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 36/134 (26%), Positives = 59/134 (44%), Gaps = 7/134 (5%)

Query: 1   MSRPTII-INDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSR 59
           MSR     +   D   +  +L++           L  +L+ A +   E++P +VVT++++
Sbjct: 11  MSREAFCQLTAGDLNILMSMLDETG-HTESFTILLREKLNYASVFFREDIPENVVTLDTQ 69

Query: 60  VKFRNLSDGEVRV--RTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVAT 117
           V +       VR     LV  A    +N+ +SV    G ALLGL VG+        G   
Sbjct: 70  VGYTV---NGVRTGPHLLVRNAAGRPANSAISVRTMRGLALLGLAVGERTEILGEDGWPE 126

Query: 118 HLEVLELEYQPEAA 131
            L V  + +QPE+ 
Sbjct: 127 TLAVERIVFQPESE 140


>UniRef50_B8DTJ6 Transcription elongation factor GreA n=15 Tax=Bifidobacteriaceae
           RepID=B8DTJ6_BIFA0
          Length = 160

 Score = 72.5 bits (177), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 39/108 (36%), Gaps = 7/108 (6%)

Query: 18  ILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVY 77
               +         + L  +L  A++    +     V   S V       G      +  
Sbjct: 53  QAAREEQSKNEGRINELIVKLRNAKIIEAPK--AGEVGNGSLVTIEL--GGNEMQYVI-G 107

Query: 78  PAKMTDSNTQ--LSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLE 123
              +T +     +S  +P+G A++G +VGD + ++ P G    + + E
Sbjct: 108 SRDITVATDYDVISPESPIGGAIIGHKVGDVVTYKAPNGREISVTIKE 155


>UniRef50_C7M0F0 GreA/GreB family elongation factor n=1 Tax=Acidimicrobium
           ferrooxidans DSM 10331 RepID=C7M0F0_ACIFD
          Length = 160

 Score = 72.5 bits (177), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 30/133 (22%), Positives = 52/133 (39%), Gaps = 12/133 (9%)

Query: 2   SRPTIIINDL-DAER-IDILLEQPAYAG--------LPIADALNAELDRAQMCSPEEMPH 51
           ++  I I    +A R +  L E   Y                +   L  A++    ++P 
Sbjct: 23  TQGRIEIAKAIEAARALGDLSENGDYHAAKDAQGKMEARIRQIQQILQSARVV-SADLPT 81

Query: 52  DVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWEL 111
           D V     V  R   + +V    +    +       +S  +P+G ALLG RVG  + +E 
Sbjct: 82  DEVRPGVVVGLRYEGEDDVEHYLVGSIEERHPGLEVVSPTSPLGEALLGARVGAWVEYEA 141

Query: 112 PGGVATHLEVLEL 124
           P G    ++V+E+
Sbjct: 142 PRGT-LKVQVVEI 153


>UniRef50_A1TE43 Transcription elongation factor greA n=11 Tax=Corynebacterineae
           RepID=GREA_MYCVP
          Length = 164

 Score = 72.1 bits (176), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 49/135 (36%), Gaps = 12/135 (8%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHDV 53
           +RP I     D      L E   Y                L   L+ A++    +    +
Sbjct: 27  NRPVIAAEINDRREEGDLRENGGYHAAREQQGQEEARIRQLQELLNNAKVGEAPKQS-GI 85

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQL---SVMAPVGAALLGLRVGDSIHWE 110
               S VK     D +     L+   +   S+ +L   S  +P+G AL+  +VG+S  + 
Sbjct: 86  ALPGSVVKVYYDDDEKDTETFLIGTREQGVSDGKLEVYSPNSPLGGALIDAKVGESRSYT 145

Query: 111 LPGGVATHLEVLELE 125
           +P G    + ++  E
Sbjct: 146 VPSGNTVKVTLVSAE 160


>UniRef50_A3DJU3 GreA/GreB family elongation factor n=3 Tax=Clostridium thermocellum
           RepID=A3DJU3_CLOTH
          Length = 160

 Score = 71.3 bits (174), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 57/135 (42%), Gaps = 13/135 (9%)

Query: 7   IINDLDAERIDILLEQPAYAGLPIA----------DALNAELDRAQMCSPEEMPHDVVTM 56
            +++++ ER  +L E  A                 D +N+ L+  ++          V +
Sbjct: 17  HVSEIEKERDMLLNEHYAEETKESINFQEFFKNYLDRINSYLNTVRVDKNGSEACPFVII 76

Query: 57  NSRVKFRNLSDGEVRVRTLVYP--AKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGG 114
           NS V+  +  + E     +V P   +   S    S ++P+G ALL   V D++  ++P G
Sbjct: 77  NSIVEVFDCEEEEKCKYRIVLPFSKEYDTSIDCASCLSPLGRALLFKNVNDNVSVQIPTG 136

Query: 115 VATHLEVLELEYQPE 129
           +  H  +L++    E
Sbjct: 137 M-LHYTILDITLPDE 150


>UniRef50_A4F866 Transcription elongation factor greA n=44 Tax=Actinobacteria
           (class) RepID=GREA_SACEN
          Length = 162

 Score = 70.9 bits (173), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 44/133 (33%), Gaps = 10/133 (7%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHDV 53
           +RP I     +A     L E   Y                L   L  A++         V
Sbjct: 27  NRPVIAAKINEAREEGDLKENGGYHAAREEQGHLESRIRQLQELLRTAKVGDV-PTEAGV 85

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAK-MTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
               S +  R   + E     L    +         S  +P+G ALL  + G++  +ELP
Sbjct: 86  AKPGSVLTVRYDDEDETEKFLLATREEGAHGDLEVYSPSSPLGQALLDAKEGETREYELP 145

Query: 113 GGVATHLEVLELE 125
            G    + +++ E
Sbjct: 146 NGGTMKVTLVKAE 158


>UniRef50_B0T2S8 GreA/GreB family elongation factor n=15 Tax=Alphaproteobacteria
           RepID=B0T2S8_CAUSK
          Length = 161

 Score = 69.8 bits (170), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 38/104 (36%), Gaps = 7/104 (6%)

Query: 21  EQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAK 80
                         +A    AQ+   +    DV+     V F +  DG  +   +V   +
Sbjct: 62  RTAMARATRDLRYWSARRASAQLRELDPA-LDVLQFGGSVTF-DREDGRRQTFRIVGEDE 119

Query: 81  MTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
              +   +S ++PV  ALLG  VGD+            +E++ +
Sbjct: 120 ADPTQGSVSYVSPVARALLGKAVGDTAIVAGG-----EVEIIAI 158


>UniRef50_Q1YFK5 Possible transcription elongation factor, GreA/GreB family n=2
           Tax=Aurantimonadaceae RepID=Q1YFK5_MOBAS
          Length = 158

 Score = 69.8 bits (170), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 46/133 (34%), Gaps = 15/133 (11%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIA-----DALN---AELDRAQMCSPEEMPHD 52
           ++   + + D +   ++   E    A   IA       L    A    A++  P +    
Sbjct: 29  VTPRGLSLIDAEIAALNERKEAARQADDKIAIANINRDLRYWNARRATAELIRPRDT-GG 87

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
                S V       G  +  T+V   +   S   +S ++P+  +L+G  VGD +     
Sbjct: 88  TAQFGSVVSIERED-GRTQQFTIVGIDEADPSAGLISYLSPLARSLIGRTVGDIVRAGTA 146

Query: 113 GGVATHLEVLELE 125
                  E++ + 
Sbjct: 147 D-----AEIIAIS 154


>UniRef50_A4CMC2 Putative uncharacterized protein n=1 Tax=Robiginitalea biformata
           HTCC2501 RepID=A4CMC2_9FLAO
          Length = 149

 Score = 69.8 bits (170), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 51/129 (39%), Gaps = 6/129 (4%)

Query: 1   MSRPTIIINDLDAERIDILLEQPA----YAGLPIADALNAELDRAQMCSPEEMPHDVVTM 56
           M    ++    + + + + LE       YA    A  L   +  A +    E P DVV  
Sbjct: 2   MKYGKLVFERQEYDALLMSLEANRVYDDYAHQHAARLLKRNMASALILDQGECPDDVVRP 61

Query: 57  NSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVA 116
           +  V  + +     R   L    K   +   +SV++ +GA+++G   GD I +  P G  
Sbjct: 62  DVWVTLKGVPS-YRRTVRLASSGKPITTPGDISVISALGASIIGRSEGDVILFGQP-GNT 119

Query: 117 THLEVLELE 125
             L + ++ 
Sbjct: 120 MSLTIAKIS 128


>UniRef50_A1A150 Transcription elongation factor GreA n=6 Tax=Bifidobacterium
           RepID=A1A150_BIFAA
          Length = 159

 Score = 69.4 bits (169), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 50/133 (37%), Gaps = 16/133 (12%)

Query: 2   SRPTIIINDLDAERID-ILLEQPAYAGLPIA--------DALNAELDRAQMCSPEEMPHD 52
                I++ + A R +  L E   Y     A        D L  +L  A++ +  +    
Sbjct: 27  EYRDEILSKVSAARAEGDLSENGGYQAAREAQRVNQGRIDELTVKLRNAKILTAPK--AG 84

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQ--LSVMAPVGAALLGLRVGDSIHWE 110
            V   S V      +G   V  L     ++ +     +S  +P+GAA+ G   GD++ + 
Sbjct: 85  EVGDGSLVTLEV--NGREMVYVL-GTRDLSIATDYSIISPESPIGAAINGAHAGDTVTYT 141

Query: 111 LPGGVATHLEVLE 123
            P G    + + E
Sbjct: 142 APNGREISVTIKE 154


>UniRef50_D2KXD7 Transcription elongation factor n=1 Tax=Lactobacillus fermentum
           RepID=D2KXD7_LACFE
          Length = 303

 Score = 68.6 bits (167), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 39/111 (35%), Gaps = 14/111 (12%)

Query: 3   RPTIIINDLDAER-IDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMPHDV 53
           +   +I  L A R +  L E   Y                L+ +L  A++    +     
Sbjct: 38  KRPTLIARLKAARVLGDLSENTEYSTAKRELRHLESCLRYLDKQLTYAKVIDVSD--DGK 95

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVY---PAKMTDSNTQLSVMAPVGAALLGL 101
           V +   V  R L D E     +V      + + +   L+  +P+G AL G 
Sbjct: 96  VALGKVVTIRFLDDQEEATYQIVGRYQAEQASLTEEVLAFDSPLGLALKGK 146


>UniRef50_A1TEF4 GreA/GreB family elongation factor n=5 Tax=Actinomycetales
           RepID=A1TEF4_MYCVP
          Length = 159

 Score = 68.6 bits (167), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 39/114 (34%), Gaps = 2/114 (1%)

Query: 10  DLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGE 69
             + ER D +++            ++  L RA   S       +      +  R    G+
Sbjct: 33  TDETERTDQVVDAWLARKER-IRQIHELLSRAD-HSTSPADDGIAEPGMVLTVRFDDTGD 90

Query: 70  VRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLE 123
                L             +V +P+G+ALLG   G+   + LP G    + VL 
Sbjct: 91  TETFLLGTRGTADPELEVYTVASPLGSALLGAVPGEQRSFRLPNGSIQQVTVLA 144


>UniRef50_C1A2Y4 Transcription elongation factor greA n=41 Tax=Corynebacterineae
           RepID=GREA_RHOE4
          Length = 164

 Score = 67.9 bits (165), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/135 (20%), Positives = 45/135 (33%), Gaps = 12/135 (8%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHDV 53
           +RP I     +      L E   Y                L   L+ A++         V
Sbjct: 27  NRPVIAAEINERREEGDLKENGGYHAAREEQGQQEARIRQLQELLNSAKV-GEAPTQSGV 85

Query: 54  VTMNSRVK-FRNLSDGEVRVRTLVYPAKM--TDSNTQLSVMAPVGAALLGLRVGDSIHWE 110
               S VK + +  + +     +    +          S  +P+G ALL  +VGD+  + 
Sbjct: 86  ALPGSVVKVYYDGDESDTETFLIATREEGARDAKLEVYSPNSPLGGALLEAKVGDTREYN 145

Query: 111 LPGGVATHLEVLELE 125
           LP G    + +L  E
Sbjct: 146 LPNGSTMKVTLLSAE 160


>UniRef50_A4T6M8 GreA/GreB family elongation factor n=3 Tax=Mycobacterium
           RepID=A4T6M8_MYCGI
          Length = 157

 Score = 65.9 bits (160), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 21/101 (20%), Positives = 35/101 (34%), Gaps = 4/101 (3%)

Query: 23  PAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMT 82
                +     L  + + A    P +    V      +  R    G+     L   A + 
Sbjct: 42  ARKERIRQIHELLTKAEHA--VDPAD--DGVAEPGMVLTVRFDDAGDTETFLLGTRATVD 97

Query: 83  DSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLE 123
                 SV +P+G+ALLG   G    ++LP G    + +L 
Sbjct: 98  SELDVYSVNSPMGSALLGATPGQQRSYQLPNGGTQQVTLLS 138


>UniRef50_A8LPH9 Putative uncharacterized protein n=1 Tax=Dinoroseobacter shibae DFL
           12 RepID=A8LPH9_DINSH
          Length = 147

 Score = 65.6 bits (159), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 51/122 (41%), Gaps = 4/122 (3%)

Query: 8   INDLDAERIDILLEQPAYAGLPIADALNAELDRAQM-CSPEEM--PHDVVTMNSRVKFRN 64
           +   D  ++   LE    A  P ++ L   L    M   P E     D+V   SRV +  
Sbjct: 25  LPAADYRQLQEHLESCVCAIPPASELLVYVLANKVMNTRPSENLHQGDLVVGGSRVTYA- 83

Query: 65  LSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
           +  G+     LV+  +   ++  + V + +GA L+G++VG         G    L V+ +
Sbjct: 84  IDGGDPLRGQLVHRVRKGPTSALIPVASLLGATLIGMQVGQRAPLLFGNGRIGRLAVIAV 143

Query: 125 EY 126
           ++
Sbjct: 144 DH 145


>UniRef50_A6DK30 Putative uncharacterized protein n=1 Tax=Lentisphaera araneosa
           HTCC2155 RepID=A6DK30_9BACT
          Length = 693

 Score = 65.2 bits (158), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 44/122 (36%), Gaps = 15/122 (12%)

Query: 13  AERIDILLEQPAYAGLPIAD--------ALNAELDRAQMCSPEEMP-HDVVTMNSRVKFR 63
           A     L E   +                L+A L++       E    + V   ++V  +
Sbjct: 566 AREHGDLRENFEFRAAKDRQKYLQLRVGELDAMLNKIGPTDFSEFKVKNRVIPAAKVTIK 625

Query: 64  NLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLE 123
           +         ++V           LS   P+  ++LG +VGDSI   LPGG     E+L 
Sbjct: 626 SPEA--ETTYSIVGMLDGDPDKNWLSFETPLAKSMLGHQVGDSIE--LPGGD--EAEILA 679

Query: 124 LE 125
           +E
Sbjct: 680 VE 681


>UniRef50_C9Z2D0 Putative uncharacterized protein n=1 Tax=Streptomyces scabiei 87.22
            RepID=C9Z2D0_STRSW
          Length = 1845

 Score = 65.2 bits (158), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 39/116 (33%), Gaps = 12/116 (10%)

Query: 11   LDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDV-VTMNSRVKFRNLSDGE 69
             D +R    L++           L A LD  Q+     +     V     V   +  +  
Sbjct: 1740 ADHDRRRQALQERRSH-------LRAVLD--QVVPDSSLTGGAMVVPGCLVGVEDPDEPG 1790

Query: 70   VRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
            +    +       D   +LS   P G AL+   VGD + W+   G    + V  ++
Sbjct: 1791 IMTYEI--AMLAGDEAERLSPDTPQGKALMWREVGDEVSWQTERGTRMRVIVRYIQ 1844


>UniRef50_A9EFE9 Putative uncharacterized protein n=1 Tax=Oceanibulbus indolifex
           HEL-45 RepID=A9EFE9_9RHOB
          Length = 165

 Score = 64.8 bits (157), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 49/127 (38%), Gaps = 5/127 (3%)

Query: 5   TIIINDLDAERIDILLEQPAYAGLPIADALNAELDR--AQMCSPEEMP-HDVVTMNSRVK 61
             ++   D  ++   LE       P +  L   L      +    ++P  D+V   + V 
Sbjct: 25  PTVLPQSDYHKLQEHLEDCDNVTRPGSTLLAYVLANKLLNVRPVADLPYLDLVLGGTEVT 84

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           +  +         LV+ A+       ++V + +GA L+G+RVG+        G    L V
Sbjct: 85  YV-IDGAAPSTGLLVHTARPGAPGGVIAVASLLGATLIGMRVGERAPLLNQDGSIVTLSV 143

Query: 122 LELEYQP 128
           + +  QP
Sbjct: 144 ISVV-QP 149


>UniRef50_A5VFW5 GreA/GreB family elongation factor n=3 Tax=Sphingomonadaceae
           RepID=A5VFW5_SPHWW
          Length = 157

 Score = 64.8 bits (157), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 42/105 (40%), Gaps = 7/105 (6%)

Query: 21  EQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAK 80
           E+   +               ++  P +   D     +RV++R   +G+ +   +V   +
Sbjct: 58  EEQLKSLKRDLRYWTTRHATMEIQPPAD--GDEAAFGTRVRYRL--NGQEKAVAIVGDDE 113

Query: 81  MTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
              +   +S  +P+  AL+G   GD   +    G A  +EVL +E
Sbjct: 114 ADPAAGLVSFSSPLARALIGAGEGDFADF---AGKADAIEVLGVE 155


>UniRef50_C4RPW8 Transcription elongation factor n=1 Tax=Micromonospora sp. ATCC
           39149 RepID=C4RPW8_9ACTO
          Length = 166

 Score = 64.4 bits (156), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/138 (20%), Positives = 52/138 (37%), Gaps = 16/138 (11%)

Query: 2   SRPTIIINDLDAERID-ILLEQPAYAGLPIAD--------ALNAELDRAQMCSPEEMPHD 52
           +RP I   +++A R +  L E   Y                L   L  AQ+   E    D
Sbjct: 31  NRPAIA-AEINARREEGDLRENGGYHAAREEQGKQEGRILYLKELLRTAQV--GEAPSAD 87

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQ--LSVMAPVGAALLGLRVGDSIHWE 110
            V+    V      D +     L+   +++ +      S  + +G ++LG R G ++ + 
Sbjct: 88  TVSPGMVVTIYFDDDTDDTETFLLGSREISSTTELTVYSPESALGKSILGTRPGQTVTYT 147

Query: 111 LPGGVATHLEVLELEYQP 128
            P G    + V  + ++P
Sbjct: 148 APSGADIKVTV--VRFEP 163


>UniRef50_UPI0001B58AC8 GreA/GreB family elongation factor n=1 Tax=Streptomyces sp. AA4
           RepID=UPI0001B58AC8
          Length = 148

 Score = 64.4 bits (156), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 19/102 (18%), Positives = 35/102 (34%), Gaps = 2/102 (1%)

Query: 22  QPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKM 81
           +           L   L  A +   +     +      +  R   DG V    L    ++
Sbjct: 38  ERRQHRQARIRQLQDLLQNA-VVGEDPPDDGIAEPGMVLTVR-YDDGGVETFLLAARDEV 95

Query: 82  TDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLE 123
                  S  +P+G AL G + G+   +E+P G    + ++E
Sbjct: 96  GGGLEVYSPDSPLGRALHGAKPGEQREYEVPSGALVRVTLVE 137


>UniRef50_B1ZU18 GreA/GreB family elongation factor n=1 Tax=Opitutus terrae PB90-1
           RepID=B1ZU18_OPITP
          Length = 162

 Score = 63.6 bits (154), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 51/129 (39%), Gaps = 5/129 (3%)

Query: 5   TIIINDLDAERIDILLEQPAYAGLPIADALNAE--LDRAQMCSPEEMPHDVVTMNSRVKF 62
           TI I   D  R+ +LL    Y      +       LDRA +        + + +    ++
Sbjct: 3   TIYITTEDNARLRLLLLLSPYTDTRQRERELLRRGLDRAAILPLSADWPEAIRLGVAFEY 62

Query: 63  RNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHL--E 120
            +L +G +    L  P +   +   + V++  GAA++G  VG+ + W         L   
Sbjct: 63  EDLDNGVIHTGCLCLPDEEATTAHGIPVLSRFGAAVIGCCVGNEVWWAEMDRSRRILVRR 122

Query: 121 V-LELEYQP 128
           V   + ++P
Sbjct: 123 VGTAVAHEP 131


>UniRef50_D1N5G0 GreA/GreB family elongation factor n=1 Tax=Victivallis vadensis
           ATCC BAA-548 RepID=D1N5G0_9BACT
          Length = 698

 Score = 62.5 bits (151), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 38/109 (34%), Gaps = 7/109 (6%)

Query: 18  ILLEQPAYAGLPIADALNAELDRAQMCSPEEMP-HDVVTMNSRVKFRNLSDGEVRVRTLV 76
              ++           L  EL R Q  S + +   D   + S ++ ++  +GE  V  L+
Sbjct: 584 DAAKERRNFLSRRRGELERELTRIQPISLKSVRVEDSAVIGSEIELQD-ENGEKEVYQLL 642

Query: 77  YPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
                      LS    +G A+L  +VG         G     +++ + 
Sbjct: 643 GAWDGDPERRFLSYRTRLGKAVLNRKVGSEFS----DGS-RQYKLIAVR 686


>UniRef50_B9ZS32 GreA/GreB family elongation factor n=1 Tax=Thioalkalivibrio sp.
           K90mix RepID=B9ZS32_9GAMM
          Length = 137

 Score = 62.5 bits (151), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 33/79 (41%), Gaps = 2/79 (2%)

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
           V+     V+  +L   E  +  L  P        ++S+++P+G+ LLGLR        L 
Sbjct: 58  VIQTGCCVRLLDLQTEETYLVELCEPEHAQPERGKISILSPLGSRLLGLRKNSLAEITLL 117

Query: 113 GGVATHL--EVLELEYQPE 129
                 L  E+L   + P+
Sbjct: 118 RSRLRFLVIEILAPGHDPD 136


>UniRef50_A0JU41 GreA/GreB family elongation factor n=21 Tax=Actinomycetales
           RepID=A0JU41_ARTS2
          Length = 164

 Score = 61.7 bits (149), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 45/128 (35%), Gaps = 15/128 (11%)

Query: 7   IINDLDAERID-ILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHDVVTMN 57
           I+  ++A R +  L E   Y                L   L  A +         +V   
Sbjct: 35  IVQKIEAARQEGDLKENGGYHAAKEEQGKIEARIRQLTVLLRDAHV-GESPADDGIVEPG 93

Query: 58  SRVKFRNLSDGEVRVRTLVYPAKM--TDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGV 115
             V  R    G+     L+   ++         S  +P+G+A++G + GD + +  P G 
Sbjct: 94  MIVVARI--AGDEETF-LLGSREIAGDSDLDVFSEKSPLGSAIVGHKEGDKLSYTAPNGK 150

Query: 116 ATHLEVLE 123
              +E+L 
Sbjct: 151 DITVEILS 158


>UniRef50_Q97HP4 Transcription elongation factor n=1 Tax=Clostridium acetobutylicum
           RepID=Q97HP4_CLOAB
          Length = 158

 Score = 60.5 bits (146), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 41/128 (32%), Gaps = 17/128 (13%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMPHD 52
           + R  I    ++A       E   Y                ++  L  A +   +++  D
Sbjct: 23  VKRHEIAKKKMEAAAFGDRSENAEYKAAKEEYYHNNRRLGQISRLLKNAIIVEEDKID-D 81

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYP-----AKMTDSNTQLSVMAPVGAALLGLRVGDSI 107
            V + S +  + +   E     LV                +SV +P G AL    VGDSI
Sbjct: 82  EVNIGSEMLLK-IGADETFKAKLVTTLNISVEDEDIE--YISVDSPFGKALYKKHVGDSI 138

Query: 108 HWELPGGV 115
              LP   
Sbjct: 139 DVNLPDNR 146


>UniRef50_A1RN18 GreA/GreB family elongation factor n=11 Tax=Shewanella
           RepID=A1RN18_SHESW
          Length = 135

 Score = 60.5 bits (146), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 36/79 (45%), Gaps = 1/79 (1%)

Query: 47  EEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDS 106
            +   + +T+  ++   NL D +     LVYP K   S  + SV++ +G++LLG   G+ 
Sbjct: 47  NDTSSNKITVGRQICLINLQDQQEYQVELVYPQKHKPSAGRFSVISDLGSSLLGRTKGEL 106

Query: 107 IHWELPGGVATHLEVLELE 125
               +  G      + ++ 
Sbjct: 107 AQVNI-LGKPVLFMIKDVS 124


>UniRef50_B2GLP4 Transcription elongation factor n=3 Tax=Actinomycetales
           RepID=B2GLP4_KOCRD
          Length = 165

 Score = 60.2 bits (145), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 48/135 (35%), Gaps = 18/135 (13%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLPIAD--------ALNAELDRAQMCSPEEMPHDVV 54
           R  I+     A     L E   Y                L   L+ AQ+         V+
Sbjct: 29  RQEIVDRIEQARSEGDLKENGGYHAAREEQGKNEGRIVQLTQLLENAQV-GEAPADDGVI 87

Query: 55  TMNSRVKFRNLSDGEVRVRTLVYPAKM--TDSNTQ----LSVMAPVGAALLGLRVGDSIH 108
                V       G+     L+   ++    +  +     S  +P+GAA+ G +VG+++ 
Sbjct: 88  EAGMVVTAEI--AGDEMTF-LMGSREVAEDLTGGEDLEVFSERSPMGAAINGHKVGETVS 144

Query: 109 WELPGGVATHLEVLE 123
           ++ P G    +++L+
Sbjct: 145 YQAPNGKDITVKILK 159


>UniRef50_Q0PQI1 Transcription elongation factor (Fragment) n=1 Tax=Endoriftia
           persephone 'Hot96_1+Hot96_2' RepID=Q0PQI1_9GAMM
          Length = 166

 Score = 60.2 bits (145), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 14/104 (13%), Positives = 28/104 (26%), Gaps = 9/104 (8%)

Query: 2   SRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMPHDV 53
            R  ++     A       E   Y                L   +   ++          
Sbjct: 57  RRREVVKALSAAAAEGDRSENAEYIYRKKELREIDRRIRYLQKRIPELKVVEQPPSNRQQ 116

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAA 97
           V   + V   +   G      +V P ++      +S+ +P+GA 
Sbjct: 117 VFFAAWVTLEDEQ-GVTHRYRIVGPDEIDHQADYISMDSPLGAG 159


>UniRef50_C4DV10 Putative uncharacterized protein n=1 Tax=Stackebrandtia nassauensis
            DSM 44728 RepID=C4DV10_9ACTO
          Length = 1498

 Score = 59.8 bits (144), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 41/112 (36%), Gaps = 12/112 (10%)

Query: 20   LEQPAYAGLPIADALNAELDRAQMCS-----PEEMPHDVVTMNSRVKFRNLSDG-EVRVR 73
             +        +A+ L  EL  A +          +  D V + SR++ R L    EV   
Sbjct: 1390 ADNATTFKDAVAEELAPEL--APLMPTTTNLANRVDADQVAIGSRIRLRFLDGNREVHEG 1447

Query: 74   TLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
            T+            +   +P+G A++G  VGD +   +        EV+ + 
Sbjct: 1448 TI--AEDGDGPT-HIPANSPLGVAIIGAEVGDVVPLLV-DSRIRRFEVVAVW 1495


>UniRef50_Q67NL4 Putative transcription elongation factor n=1 Tax=Symbiobacterium
           thermophilum RepID=Q67NL4_SYMTH
          Length = 154

 Score = 59.4 bits (143), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 26/108 (24%), Positives = 45/108 (41%), Gaps = 2/108 (1%)

Query: 17  DILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLV 76
           + L            +     L+R      + +  DVV M+  V   + +DG   V T+V
Sbjct: 42  EGLAYSVRPHLRRYVEVAGQLLERMGGPDGDPVD-DVVFMDVPVTLVDETDGTEEVYTVV 100

Query: 77  YPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
            P +   +   +S ++P+G ALL  RV D +  + PGG      +  +
Sbjct: 101 LPEEGDPAKGHISCLSPLGLALLLKRVNDRVVIDAPGGRF-TYRIAAV 147


>UniRef50_Q2CH34 Putative uncharacterized protein n=2 Tax=Oceanicola
           RepID=Q2CH34_9RHOB
          Length = 155

 Score = 59.4 bits (143), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 31/126 (24%), Positives = 47/126 (37%), Gaps = 6/126 (4%)

Query: 7   IINDLDAERIDILLEQPAYAGLPIADALNAELD---RAQMCSPEEMPHDVVTMNSRVKFR 63
           ++   D   ++ +L        P    LN  L    R    +PE +P  +V     V + 
Sbjct: 29  LLTANDRSGVERMLRHRGTKHAPNPALLNGLLRHKLRISQPAPEPVPPTLVVAGCHVTYM 88

Query: 64  NLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLE 123
              +G  R  TLV          +L V   +GA LLG+R    +      G    L VL+
Sbjct: 89  ISGEGA-RSGTLVMS--SVPVPGRLLVATLLGATLLGMRKMQKVPLLRDTGEIDTLVVLD 145

Query: 124 LEYQPE 129
           +   PE
Sbjct: 146 VAPPPE 151


>UniRef50_Q5QX13 Transcription elongation factor greA/greB family n=1 Tax=Idiomarina
           loihiensis RepID=Q5QX13_IDILO
          Length = 151

 Score = 59.0 bits (142), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 2/93 (2%)

Query: 33  ALNAELDRAQMCSPEE-MPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVM 91
            L+  L+R +    +E +    + + +    RN+   E     LV P      N  +S +
Sbjct: 50  ELSILLNRLEFSESKEALIEKRIRVGASAVLRNVKTMEQVKVRLVPPELADTDNYLVSFI 109

Query: 92  APVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
           +P+G+ LLGLRVGD     +   ++   EVL +
Sbjct: 110 SPLGSTLLGLRVGDIATVIVKD-ISIKWEVLTV 141


>UniRef50_A6NYB0 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus
           ATCC 29799 RepID=A6NYB0_9BACE
          Length = 163

 Score = 58.6 bits (141), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 24/127 (18%), Positives = 44/127 (34%), Gaps = 13/127 (10%)

Query: 10  DLDAE-RIDILLEQPAYAGLPIAD-----------ALNAELDRAQMCSPEEMPHDVVTMN 57
           + DA  R   + ++   A   IA+           +L   LD  +  S    P   V + 
Sbjct: 37  EQDAAQRASAMGDRSENAEWQIANDNIARYTVSIMSLVNTLDTYKKFSASYTPTGKVMVG 96

Query: 58  SRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVAT 117
           S +K  +          +            +S   P+G+A+LG   G  +  + P G   
Sbjct: 97  STLKVVDRRHNSTLYIKIYPAGLGNAKIGAISTATPLGSAVLGKTAGTEVIVKAPLGDIP 156

Query: 118 HLEVLEL 124
           +  + E+
Sbjct: 157 YY-IEEV 162


>UniRef50_Q0BS89 Transcription elongation factor greB n=1 Tax=Granulibacter
           bethesdensis CGDNIH1 RepID=Q0BS89_GRABC
          Length = 164

 Score = 56.7 bits (136), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 16/98 (16%), Positives = 29/98 (29%), Gaps = 12/98 (12%)

Query: 6   IIINDLDAERID-ILLEQPA------YAGLPIADALNAELDR---AQMCSPEEMPHDVVT 55
           +   + +  R+   L E+             +A  L   L R   AQ+        + V 
Sbjct: 35  LTAIEAEIARLQTALAEEKQSTVEESERRAVLARDLRYWLARRASAQLVPTAPENAEEVA 94

Query: 56  MNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAP 93
               VK +    G      +V   +       +S  +P
Sbjct: 95  FGDTVKLKL--GGRTVTYRIVGEDEADPKQGLISYASP 130


>UniRef50_D2NP88 Transcription elongation factor n=2 Tax=Rothia mucilaginosa
           RepID=D2NP88_9MICC
          Length = 189

 Score = 56.7 bits (136), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 17/110 (15%), Positives = 33/110 (30%), Gaps = 10/110 (9%)

Query: 20  LEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPA 79
                         L   L+ A +         VV     ++      G      L+   
Sbjct: 78  ARDEQAKNEARIKQLKHLLETAHIGD-TPADDGVVEHGMVIEAEV--AGRTLKF-LLGSR 133

Query: 80  K------MTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLE 123
           +              S  +P+GAA++G + GD + +  P G     +++ 
Sbjct: 134 EIEDTLPAGSDLKVFSEKSPLGAAIMGAKQGDEVTYTAPNGKELSAKIIS 183


>UniRef50_C4DVL0 Transcription elongation factor n=1 Tax=Stackebrandtia nassauensis
           DSM 44728 RepID=C4DVL0_9ACTO
          Length = 152

 Score = 56.7 bits (136), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 6/93 (6%)

Query: 28  LPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQ 87
               + L A LD +   +  +   D+V + S V  R   D      TL         +  
Sbjct: 60  DARVEKLTARLDASA--TATQGRTDLVDVGSTVTIRFSDD---TTETLHIGEIADVDDQL 114

Query: 88  -LSVMAPVGAALLGLRVGDSIHWELPGGVATHL 119
            ++  +P+G ALLG R GD++ +  P G AT +
Sbjct: 115 LVTAGSPLGRALLGHRAGDTVSYNTPSGHATAV 147


>UniRef50_D0M4S6 Putative uncharacterized protein n=7 Tax=Vibrio RepID=D0M4S6_VIBSE
          Length = 138

 Score = 56.3 bits (135), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 32/84 (38%), Gaps = 1/84 (1%)

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            + +   V+  ++        TLV   K       L+V + +G+ LLG    D+   E+ 
Sbjct: 49  RIAVGDTVRLVDVERAYQYRMTLVNSHKSQPMTGMLAVDSYLGSRLLGRAKNDAFEIEIF 108

Query: 113 GGVATHLEVLELEYQPEAAGDYLL 136
                   + E+ +Q +     +L
Sbjct: 109 N-QRRCFVITEIVHQSQPPAQKML 131


>UniRef50_Q1DFU3 GreA/GreB domain protein n=3 Tax=Myxococcales RepID=Q1DFU3_MYXXD
          Length = 171

 Score = 55.5 bits (133), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 44/122 (36%), Gaps = 17/122 (13%)

Query: 17  DILLEQPAYAGLPIADALNA--ELDRAQMCSPEEMPHDVVTMNSRVKF--RNLSDGEVRV 72
             L    A     + + L A  +  +A++  P       V + + V     +      R 
Sbjct: 54  GSLATGQAQRARRVQEELQALTKFGQAEV--PRFPRQGPVALGAIVDVSTEDEEGFSERT 111

Query: 73  RTLVYPAKMTDS------NTQLSV---MAPVGAALLGLRVGDSIHWELPGGVATHLEVLE 123
              V PA           +  LSV    +PVG AL+G + GD++   L  G      VLE
Sbjct: 112 FF-VLPAGAGTELTGPGGDGFLSVITPASPVGRALMGRKAGDTVEVML-AGEVREWTVLE 169

Query: 124 LE 125
           + 
Sbjct: 170 VA 171


>UniRef50_D1CSU3 Transcription elongation factor (Fragment) n=1 Tax=Sinorhizobium
           fredii RepID=D1CSU3_RHIFR
          Length = 109

 Score = 54.8 bits (131), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 36/93 (38%), Positives = 51/93 (54%), Gaps = 1/93 (1%)

Query: 38  LDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAA 97
           L RA++CSP ++P DVVT+NSRV F  +  G  R   LV        N  +SV + +G  
Sbjct: 1   LVRAEICSPRKVPDDVVTINSRVTFC-VDGGVPRTANLVRNESQDFPNYTVSVESLLGLG 59

Query: 98  LLGLRVGDSIHWELPGGVATHLEVLELEYQPEA 130
           LLGLR G +I  E   G    + V+ +++Q  A
Sbjct: 60  LLGLRAGRAIAVETEAGGLQKVNVIRIDFQALA 92


>UniRef50_Q83FN6 Transcription elongation factor n=3 Tax=Micrococcineae
           RepID=Q83FN6_TROWT
          Length = 172

 Score = 54.4 bits (130), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 41/108 (37%), Gaps = 6/108 (5%)

Query: 20  LEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPA 79
            ++           L   L  A++         VV     V  R    G    R L+   
Sbjct: 64  AKEEQARIEGRIQQLQDLLRHARV-GQAPKARGVVEPGVVVTARI---GGSERRFLLGNR 119

Query: 80  KMTDSNTQ--LSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
           ++  +++    S  + +G A+LGL+ G  I  + P G    + +L++E
Sbjct: 120 EIAHTSSLATYSESSAIGQAILGLKEGSEIECKSPTGALIKVAILKVE 167


>UniRef50_UPI0001AF7313 transcription elongation factor GreA n=1 Tax=Mycobacterium kansasii
           ATCC 12478 RepID=UPI0001AF7313
          Length = 159

 Score = 52.8 bits (126), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 18/148 (12%), Positives = 39/148 (26%), Gaps = 24/148 (16%)

Query: 2   SRPTIIINDLDAERI--------DILLEQPAYA--------------GLPIADALNAELD 39
           +   I +   D  R+             +                         +   L 
Sbjct: 3   TTERIRMTQQDHSRLLSELIALRSQHAVEAPDDFLDYHANVIARYCARKARIREIEQLLS 62

Query: 40  RAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALL 99
            A +   +     +      V     + G+     L             S ++P+G A+ 
Sbjct: 63  SA-IVGVDTGGDVIAQPGMVVTISYEATGQTETFLLGRRGAQNADIPVYSTLSPLGRAIT 121

Query: 100 GLRVGDSIHWELPGGVATHLE-VLELEY 126
           G R+G+   + +P G    +  +  + Y
Sbjct: 122 GARLGEQRVYSIPQGADLVVTLIEAVPY 149


>UniRef50_C6UNA6 Putative transcription elongation factor GreA n=1 Tax=Candidatus
           Hodgkinia cicadicola Dsem RepID=C6UNA6_HODCD
          Length = 155

 Score = 52.1 bits (124), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 22/116 (18%), Positives = 40/116 (34%), Gaps = 10/116 (8%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNA--------ELDRAQMCSPEEMPHDV 53
            +P +      A  +  L E   Y      D LN          L RA+  +P     + 
Sbjct: 25  KKPALKAQLKAARSLGDLSENADYQAARREDKLNEARINEILQTLARAK-LAPARSAANR 83

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHW 109
            + NS V  +    G++    +V   +   +   + + + V    L  +VGD +  
Sbjct: 84  PSYNSTVVLKRAD-GKLLAFNIVGDDEAIATEANVGLSSDVARQCLNKKVGDVVVV 138


>UniRef50_UPI0001AF7314 transcription elongation factor GreA n=1 Tax=Mycobacterium kansasii
           ATCC 12478 RepID=UPI0001AF7314
          Length = 160

 Score = 51.7 bits (123), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 39/138 (28%), Gaps = 25/138 (18%)

Query: 8   INDLDAERIDILLEQPAYAGLPI--------------------ADALNAELDRAQMCSPE 47
           I+    ER+   L                                 ++  L RA +   +
Sbjct: 14  ISSQAYERLQRKLADLRQRSAREPADSDFDNSAPDVQRAWQTRIRRIHDLLVRADV-GED 72

Query: 48  EMPHDVVTMNSRVKFRNLSDGEVRVRTLV--YPAKMTDSNTQLSVMAPVGAALLGLRVGD 105
                +      +  R    G+     L               S  +P+GAA++G   G+
Sbjct: 73  PPDDGIAEPGMVLTVRYHDTGDTETFLLGARGAEHCDVE--VYSPRSPLGAAVIGAIPGE 130

Query: 106 SIHWELPGGVATHLEVLE 123
              + LPGG    + ++ 
Sbjct: 131 QRSFTLPGGANLTVTLVS 148


>UniRef50_C1YJ21 Transcription elongation factor n=3 Tax=Actinomycetales
           RepID=C1YJ21_NOCDA
          Length = 162

 Score = 51.3 bits (122), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 18/106 (16%), Positives = 33/106 (31%), Gaps = 4/106 (3%)

Query: 22  QPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKM 81
                       +   L  A +         +      +  R     E     L+     
Sbjct: 51  HDPAVRQARVHTIERLLSEA-VVDEAAPDDGIAAPGKVLTIR-YDGEEEDEVFLLGVRDA 108

Query: 82  TDSNTQ--LSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
           + ++     S  +P+GAAL+G R G+   +  P G    + +L  E
Sbjct: 109 SVADRMTVYSPESPLGAALVGARQGERRTFTAPRGAVIGVTLLRAE 154


>UniRef50_A4FCQ0 Transcription elongation factor G n=1 Tax=Saccharopolyspora
           erythraea NRRL 2338 RepID=A4FCQ0_SACEN
          Length = 120

 Score = 48.6 bits (115), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 34/112 (30%), Gaps = 6/112 (5%)

Query: 24  AYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTD 83
                     +   L  A +         V      +  R   DGE     L        
Sbjct: 3   DGHRRARIREIQELLHDA-VVGEAPPDDGVAEPGMVLTVRF-DDGETETFLLGARVGADL 60

Query: 84  SNTQL-SVMAPVGAALLGLRVGDSIHWELP---GGVATHLEVLELEYQPEAA 131
           +   + S  +P+GAA  G R G+   + LP   GG         +  Q EA+
Sbjct: 61  NGLAVYSPESPLGAAQPGARQGEQRAYSLPKKNGGTVLIFVCGAVIRQAEAS 112


>UniRef50_Q2SLP2 Transcription elongation factor n=1 Tax=Hahella chejuensis KCTC
           2396 RepID=Q2SLP2_HAHCH
          Length = 160

 Score = 48.6 bits (115), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 40/126 (31%), Gaps = 11/126 (8%)

Query: 8   INDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEE-MPHDVVTMNSRVKFRNLS 66
           + +   +   +     A           A L   Q   P+     D V + + V      
Sbjct: 38  VAENKYDTFGLEASYLAEGQSRRVREFEAALASYQNTPPKHFTDQDEVAVFALVTLEAED 97

Query: 67  DGEVRVRTLVYPAKMTDSNTQ-------LSVMAPVGAALLGLRVGDSIHWELPGGVATHL 119
             E R+   V P                ++  +P+G  L+G  VGD +      G     
Sbjct: 98  GSERRLF--VGPEAAGFKFLLDEQEVLVITRRSPIGMKLMGKMVGDVVALVAGNGE-KEF 154

Query: 120 EVLELE 125
           E++E+E
Sbjct: 155 EIVEIE 160


>UniRef50_D0J1H3 Putative uncharacterized protein n=1 Tax=Comamonas testosteroni
           CNB-2 RepID=D0J1H3_COMTE
          Length = 160

 Score = 48.2 bits (114), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 45/125 (36%), Gaps = 11/125 (8%)

Query: 8   INDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDV-VTMNSRVKFRNLS 66
           I +   + + +     A      A+A+   +   +   P+       + + + +   +  
Sbjct: 38  IAENKYDTLGLEASYLAAGQARRAEAIRQAMANWRQFRPQPYNASKGIQLGALICLVDSD 97

Query: 67  DGEVRVRTLVYPAKMTDSN-------TQLSVMAPVGAALLGLRVGDSIHWELPGGVATHL 119
           D + ++   + P                +S  AP+G A+LG   GD +  ++   V    
Sbjct: 98  DKQQQIF--LGPDGGNMKLFNGAELIQVISSKAPLGRAMLGKCEGDEVSIQV-APVRQQF 154

Query: 120 EVLEL 124
           EVL +
Sbjct: 155 EVLWV 159


>UniRef50_B2IF32 DNA helicase, putative n=2 Tax=Rhizobiales RepID=B2IF32_BEII9
          Length = 1649

 Score = 48.2 bits (114), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 2/69 (2%)

Query: 54   VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
            + +  RV  + L D +    T+    +   +N  LSV +P+G+ LLG    + I +E   
Sbjct: 1577 IRIGDRVIIQYLDDHKTMSFTITKDKE-DYANGFLSVGSPLGSQLLGAVEDEEIAFE-ES 1634

Query: 114  GVATHLEVL 122
            G A  + ++
Sbjct: 1635 GRARPVLIV 1643


>UniRef50_A0QE66 Transcription elongation factor GreA n=2 Tax=Mycobacterium avium
           complex (MAC) RepID=A0QE66_MYCA1
          Length = 177

 Score = 47.8 bits (113), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/112 (18%), Positives = 36/112 (32%), Gaps = 3/112 (2%)

Query: 22  QPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKM 81
                       L   L  A   S +     V      +  R  + GE     L      
Sbjct: 45  ARPSVRRNRIRVLEELLA-AGPGSGDRAAQAVAAPGMVLTIRYDATGETETFLLGRRNGG 103

Query: 82  TDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQPEAAGD 133
                  S+ +P+G ++ G R G+   + +P      + +L++   P A GD
Sbjct: 104 GGRVKVYSMASPLGRSVAGARPGEQRIYAIPNDTGRVVTLLKVV--PYAGGD 153


>UniRef50_A3M8R9 Putative uncharacterized protein n=2 Tax=Acinetobacter baumannii
           ATCC 17978 RepID=A3M8R9_ACIBT
          Length = 1250

 Score = 47.1 bits (111), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/91 (15%), Positives = 34/91 (37%), Gaps = 17/91 (18%)

Query: 35  NAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQ-LSVMAP 93
             EL  AQ+              + + ++  +  E +   ++   +    + + +S  + 
Sbjct: 741 EEELTNAQI-------------GTAITYKLKNMTETK---IIDFDESLPRDNEFISYESE 784

Query: 94  VGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
           +   L+G +VGD    +   G     E+ E+
Sbjct: 785 LAKNLIGKKVGDKFTIQGTFGFENEYEITEI 815


>UniRef50_Q0VMM9 Putative uncharacterized protein n=2 Tax=Alcanivorax
           RepID=Q0VMM9_ALCBS
          Length = 144

 Score = 46.7 bits (110), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/93 (25%), Positives = 40/93 (43%), Gaps = 1/93 (1%)

Query: 33  ALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMA 92
            L   +++ +M    E       +  RV   +L D E     L    K    N  LSV++
Sbjct: 32  RLMEVMEKIEMLRGVESDLAAAAVGDRVFLFSLEDEEQMSFILAEAGKRPLDNKDLSVLS 91

Query: 93  PVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
           P+GAALLG   G  ++ +   G      +L+++
Sbjct: 92  PLGAALLGSLPGAVVNVDF-LGHRHRYLLLKVK 123


>UniRef50_C7MX98 Transcription elongation factor n=1 Tax=Saccharomonospora viridis
           DSM 43017 RepID=C7MX98_SACVD
          Length = 154

 Score = 46.3 bits (109), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 4/69 (5%)

Query: 57  NSRVKFRNLSDGEVRVRTLVY-PAKMT-DSNTQLSVMAPVGAALLGLRVGDSIHWELPGG 114
            ++V  R   DG V    +V   A+   D  + L+  +P+G AL G + GD++ +  P G
Sbjct: 83  GTKVTLRF-DDGSVEDMVVVGVAAEADEDDTSTLTADSPLGQALAGHQEGDTVTYRTPKG 141

Query: 115 VATHLEVLE 123
                E+++
Sbjct: 142 E-VTAEIVK 149


>UniRef50_P65095 Uncharacterized protein Rv3788/MT3896 n=17 Tax=Mycobacterium
           RepID=Y3788_MYCTU
          Length = 161

 Score = 44.8 bits (105), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 44/118 (37%), Gaps = 11/118 (9%)

Query: 12  DAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMN-SRVKFRNLSDGEV 70
           DA       ++ A  G    + L+  L       P            + V  R    GEV
Sbjct: 48  DAAEAIQRADELAILGDR-INELDRRLRT----GPTPWSGSETLPGGTEVTLRFPD-GEV 101

Query: 71  RVRTLVYPAKMTD---SNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
               ++   + T        L+  +P+G AL G + GD++ +  P G    +++L ++
Sbjct: 102 VTMHVISVVEETPVGREAETLTARSPLGQALAGHQPGDTVTYSTPQGPNQ-VQLLAVK 158


>UniRef50_UPI0001AEE145 nucleoside diphosphate kinase regulator n=1 Tax=Streptomyces albus
           J1074 RepID=UPI0001AEE145
          Length = 160

 Score = 44.4 bits (104), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 2/67 (2%)

Query: 66  SDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
            DG  +  ++          + ++  +P+G AL+G R GD++ +  P G A  + V+ L 
Sbjct: 96  DDGAEQTVSI-GEVTQGYDASLVTADSPLGKALMGCRPGDAVRYRTPDGEAGAV-VVSLG 153

Query: 126 YQPEAAG 132
             P A G
Sbjct: 154 GAPPAQG 160


>UniRef50_A9EFU2 Nucleoside diphosphate kinase regulator n=1 Tax=Oceanibulbus
           indolifex HEL-45 RepID=A9EFU2_9RHOB
          Length = 149

 Score = 44.4 bits (104), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 45/127 (35%), Gaps = 10/127 (7%)

Query: 3   RPTIIINDLD---AERIDILLEQPAYAGLPIAD-ALNAELDRAQMCSPEEMPHDVVTMNS 58
           R    +   D    ER+  L          + +  L+ +L  A+  +PE  P ++V    
Sbjct: 25  RSRFQLTRADRIGVERLLSLGLTAECPNPALIEGFLHHKLRLAR-PAPEPTPANLVVAGR 83

Query: 59  RVKFRNLSDGEVR-VRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVAT 117
            V F          V T V      +    + V + +GA +LG++           G   
Sbjct: 84  LVSFMTHGGRARSGVLTFV----PDNDAGCIPVTSFLGATMLGMQKLQRAPLLREDGWID 139

Query: 118 HLEVLEL 124
            L VL++
Sbjct: 140 TLIVLDV 146


>UniRef50_Q39Z43 GreA/GreB family elongation factor n=18 Tax=Proteobacteria
           RepID=Q39Z43_GEOMG
          Length = 160

 Score = 43.6 bits (102), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 45/126 (35%), Gaps = 11/126 (8%)

Query: 7   IINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDV-VTMNSRVKFRNL 65
            I D   +   +     A      A  +   L+  ++ +  E   +  + + + V   + 
Sbjct: 37  CIPDNKYDTTALEASYVAQGQANRAQEIRMALESYRVLALREFDDETPIRLTALVILEDE 96

Query: 66  SDGEVRVRTLVYPAKMT--DSNTQ-----LSVMAPVGAALLGLRVGDSIHWELPGGVATH 118
                RV   + P       ++ +     ++  +P+G  LLG  VGD +     GG    
Sbjct: 97  DGEARRVF--LGPEAGGLKIADGEGEIVVITPQSPLGRVLLGKVVGDQLQ-AGMGGTRKT 153

Query: 119 LEVLEL 124
             V+E+
Sbjct: 154 FTVVEV 159


>UniRef50_D0M044 Transcription elongation factor n=15 Tax=Vibrionales
           RepID=D0M044_VIBSE
          Length = 159

 Score = 43.6 bits (102), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/125 (16%), Positives = 42/125 (33%), Gaps = 10/125 (8%)

Query: 7   IINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLS 66
            + +   + + +     A+           EL + +     +     V + + V   + +
Sbjct: 37  TVPEHKYDTLALEAAYLAHGQAMRIQESEDELRQYRALVTRDFKGAPVGVGAYVVLADEN 96

Query: 67  DGEVRVRTLVYPAKMTDSNTQ-------LSVMAPVGAALLGLRVGDSIHWELPGGVATHL 119
             E      V P     +          L+  +P+G AL G   GD I  ++ G   T  
Sbjct: 97  LLEKHFF--VGPCSGGLTVKYQAQEVFVLTAKSPLGRALFGKEEGDEIDVKI-GEKTTCY 153

Query: 120 EVLEL 124
           EV+ +
Sbjct: 154 EVVTV 158


>UniRef50_C0BIS2 GreA/GreB family elongation factor n=1 Tax=Flavobacteria bacterium
           MS024-2A RepID=C0BIS2_9BACT
          Length = 148

 Score = 43.2 bits (101), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 31/74 (41%), Gaps = 11/74 (14%)

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYP-AKMTDSNTQ-LSVMAPVGAALLGLRVGDSIHWEL 111
           V++ S V    L+D E    ++     ++       +S  +P+G  L+G +V D I +  
Sbjct: 84  VSLGSVV----LTDKENYYISIATNFCEIDAKKYYCISAQSPIGKLLIGKKVNDKIEFN- 138

Query: 112 PGGVATHLEVLELE 125
                    +LE+ 
Sbjct: 139 ----KRLSTILEIR 148


>UniRef50_A8H435 GreA/GreB family elongation factor n=2 Tax=Shewanella
           RepID=A8H435_SHEPA
          Length = 170

 Score = 43.2 bits (101), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/108 (13%), Positives = 35/108 (32%), Gaps = 10/108 (9%)

Query: 25  YAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDS 84
            A +   +A+   L+   +   +      V +   V   + +         V P      
Sbjct: 66  QADIRAFEAMFTRLNSNSIIESKGTKEPKVELGRLVLLMDENGKNQ--YLFVGPGAGGLK 123

Query: 85  NTQ-------LSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
                     +++ +P+G  +   R GD     +  G     E++E++
Sbjct: 124 IAYEHDSIMVVTLESPLGITMANKRQGDDFSLNV-AGNKREYEIIEVK 170


>UniRef50_Q0F3H5 GreA/GreB family elongation factor n=1 Tax=Mariprofundus
           ferrooxydans PV-1 RepID=Q0F3H5_9PROT
          Length = 161

 Score = 42.4 bits (99), Expect = 0.004,   Method: Composition-based stats.
 Identities = 15/81 (18%), Positives = 29/81 (35%), Gaps = 6/81 (7%)

Query: 48  EMPHDVVTMNSRVKFRNLSDGEVRVRTLVYP-----AKMTDSNTQLSVMAPVGAALLGLR 102
             P  V+ ++S V   +    +  +                  T ++V +P+G+AL+G  
Sbjct: 80  PAPSPVIGLSSLVVLADEHHEQRYLWLAADAGGLKIDYADTPITIITVKSPLGSALVGKA 139

Query: 103 VGDSIHWELPGGVATHLEVLE 123
            GD     +  G      V+ 
Sbjct: 140 AGDEFEICI-AGKTRAYTVVS 159


>UniRef50_B2A7T5 Putative uncharacterized protein n=1 Tax=Natranaerobius
           thermophilus JW/NM-WN-LF RepID=B2A7T5_NATTJ
          Length = 303

 Score = 42.1 bits (98), Expect = 0.005,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 30/73 (41%), Gaps = 4/73 (5%)

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           +T+  +V  ++L D  +    L            +S  +PVG  L+G   G+ I  E+  
Sbjct: 95  ITIEDQVTIKDLLDDNIFQFKL-TENNKDTEIKTISPKSPVGQKLIGKTYGEIIEVEVST 153

Query: 114 -GVAT--HLEVLE 123
            G       +VL+
Sbjct: 154 IGKKELNKYKVLD 166


>UniRef50_A4VNK9 Transcription elongation factor n=1 Tax=Pseudomonas stutzeri A1501
           RepID=A4VNK9_PSEU5
          Length = 158

 Score = 42.1 bits (98), Expect = 0.006,   Method: Composition-based stats.
 Identities = 17/124 (13%), Positives = 33/124 (26%), Gaps = 13/124 (10%)

Query: 9   NDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDG 68
           N  D   ++      A         +   L   +           V + +      L   
Sbjct: 41  NKYDTRGLE--AAYLADGQRRRLHEIETALAAYRNLQAGVSSDGRVRVGA---LLCLDHD 95

Query: 69  EVRVRTLVYPAKMTDSNTQ-------LSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
                  + P                ++  +P+G  LLG  + D +   +  G     EV
Sbjct: 96  GAERWFFLGPDAAGLKLQHDGREILVITARSPLGQGLLGRELRDEVELRV-HGQLQRYEV 154

Query: 122 LELE 125
           L++ 
Sbjct: 155 LQIA 158


>UniRef50_B5FBA9 Transcription elongation factor n=2 Tax=Vibrio fischeri
           RepID=B5FBA9_VIBFM
          Length = 161

 Score = 41.7 bits (97), Expect = 0.007,   Method: Composition-based stats.
 Identities = 15/74 (20%), Positives = 30/74 (40%), Gaps = 8/74 (10%)

Query: 58  SRVKFRNLSDGEVRVRTL------VYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWEL 111
           + V   N  D       +      V  A      + ++  AP+G A++G ++GD     L
Sbjct: 90  ALVTLVNQDD-VESTFFIGPSAGGVKVAHQDLVFSLITPSAPLGKAIIGQQLGDEFELNL 148

Query: 112 PGGVATHLEVLELE 125
             G     E+++++
Sbjct: 149 -AGKKQQYEIIDVQ 161


>UniRef50_Q1MZY3 Putative uncharacterized protein n=1 Tax=Bermanella marisrubri
           RepID=Q1MZY3_9GAMM
          Length = 155

 Score = 41.7 bits (97), Expect = 0.007,   Method: Composition-based stats.
 Identities = 15/121 (12%), Positives = 38/121 (31%), Gaps = 8/121 (6%)

Query: 9   NDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMP-HDVVTMNSRVKFRNLSD 67
            +   + + +     A+      D L  ++ R            D + + + V+  N   
Sbjct: 39  AETQYDTLGLEQAYLAHGQSERIDNLQQQIARLNHFDLRTFDEDDEIHLGAFVQLINSQT 98

Query: 68  GEVRVRTLV---YPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
            +     ++       +  S   L+   P+  A++GL + D        G      + ++
Sbjct: 99  NKNLDVFILPCAGGYTLEKSIHTLTPDTPIAKAIMGLGIDDEFKL----GNGQRYRITKV 154

Query: 125 E 125
            
Sbjct: 155 S 155


>UniRef50_UPI0001B57B91 nucleoside diphosphate kinase regulator n=1 Tax=Streptomyces sp.
           AA4 RepID=UPI0001B57B91
          Length = 152

 Score = 41.3 bits (96), Expect = 0.008,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 37/108 (34%), Gaps = 11/108 (10%)

Query: 10  DLDAERIDILLEQPAY--AGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSD 67
             DA     ++++             + A+L+         +P       +RV  R    
Sbjct: 41  TGDAADQADVIDRAEAAARLDRQIADVTAKLEHGA-YDSSLLPD-----GTRVSLRFSD- 93

Query: 68  GEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGV 115
           G+    T+V           ++  +P+G AL   + G+ I +  P G 
Sbjct: 94  GDEEEFTVVTLPGEDADA--ITSDSPLGLALATAKAGEEISYRTPRGQ 139


>UniRef50_A6VXC9 GreA/GreB family elongation factor n=2 Tax=Marinomonas
           RepID=A6VXC9_MARMS
          Length = 163

 Score = 40.9 bits (95), Expect = 0.013,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 27/83 (32%), Gaps = 9/83 (10%)

Query: 51  HDVVTMNSRVKFRNLSDG-EVRVRTLVYPAKMTDSNTQL-------SVMAPVGAALLGLR 102
             V+ +   V    L           + P     +   +       +  +PVG  LLG  
Sbjct: 82  EGVIDLWCLVTLTELESSCGTEKYFFISPCAGGLTIEIIEKKVCLVTPFSPVGKKLLGKV 141

Query: 103 VGDSIHWELPGGVATHLEVLELE 125
           VGD +   L  G     E+  +E
Sbjct: 142 VGDEVEL-LQNGKQMAYEITTIE 163


>UniRef50_Q3A1F8 GreA/GreB family elongation factor n=4 Tax=Desulfuromonadales
           RepID=Q3A1F8_PELCD
          Length = 185

 Score = 40.5 bits (94), Expect = 0.017,   Method: Composition-based stats.
 Identities = 19/126 (15%), Positives = 41/126 (32%), Gaps = 12/126 (9%)

Query: 8   INDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDV-VTMNSRVKFRNLS 66
           I D     + +     A      A  +   L   +  + +    +  +   + V+  +  
Sbjct: 64  IPDNKYATLGLEASYLAQGYANRAQEIRHALQAFRQLTLQRFSENSPIRQTALVQLEDEE 123

Query: 67  DGEVRVRTLVYPAKMTDSNTQ-------LSVMAPVGAALLGLRVGDSIHWELPGGVATHL 119
               R    + PA      +        ++  +P+G ALLG + GD +      G     
Sbjct: 124 G--QRRWLFLGPAAGGLRLSFGKREVMVITPASPLGKALLGKQCGDLVEIAGDVG--REY 179

Query: 120 EVLELE 125
           E++ + 
Sbjct: 180 EIVSIA 185


>UniRef50_Q4K8S4 Putative uncharacterized protein n=1 Tax=Pseudomonas fluorescens
           Pf-5 RepID=Q4K8S4_PSEF5
          Length = 139

 Score = 40.5 bits (94), Expect = 0.018,   Method: Composition-based stats.
 Identities = 14/128 (10%), Positives = 37/128 (28%), Gaps = 15/128 (11%)

Query: 8   INDLDAERIDILLEQPAYAGLPIADALNAEL---DRAQMCSPEEMPHDVVTMNSRVKFRN 64
           I +   + + +     A       + +   L       +   +      + + + +   +
Sbjct: 17  IAENKYDTLGLEASYLAAGQARRVEEIRQALGLWQNLSLRPYDPQKG--IQIGALLGLED 74

Query: 65  LSDGEVRVRTLVYPAKMTDSNTQ-------LSVMAPVGAALLGLRVGDSIHWELPGGVAT 117
            +  E      + P                ++  +P+G +LLG    D +   +  G   
Sbjct: 75  ENGHEQ--WLFLGPDGAGLKVYVVGQLVTVITPRSPLGKSLLGKFEDDEVEIVV-AGARQ 131

Query: 118 HLEVLELE 125
              V E+ 
Sbjct: 132 QFTVTEVR 139


>UniRef50_B6EH16 Putative uncharacterized protein n=1 Tax=Aliivibrio salmonicida
           LFI1238 RepID=B6EH16_ALISL
          Length = 173

 Score = 40.1 bits (93), Expect = 0.019,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 31/75 (41%), Gaps = 9/75 (12%)

Query: 58  SRVKFRNLSDGEVRVRTL-------VYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWE 110
           + V   N  D E +   +       V       +   ++  AP+G A++G ++GD    +
Sbjct: 101 ALVTLVNQDDIESQ-FFIGPSAGGGVKVTHEDMTFLLITPSAPLGKAMIGKQLGDEFELD 159

Query: 111 LPGGVATHLEVLELE 125
           L  G     E++ ++
Sbjct: 160 L-SGRKQQYEIIGVQ 173


>UniRef50_B8CMM7 Transcription elongation factor n=1 Tax=Shewanella piezotolerans
           WP3 RepID=B8CMM7_SHEPW
          Length = 190

 Score = 40.1 bits (93), Expect = 0.022,   Method: Composition-based stats.
 Identities = 18/101 (17%), Positives = 38/101 (37%), Gaps = 12/101 (11%)

Query: 32  DALNAELD-RAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNT---- 86
           + L + L  RA   S  ++P   + +   V+  +  D  +     + P            
Sbjct: 93  EQLFSLLKHRALNESDSDIPL-QIALGHLVELVDEQD--IVSLLFMGPNAGGLKIDFAKC 149

Query: 87  ---QLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
               ++  +P+G  L+   VGD +   +  G   H E++ +
Sbjct: 150 NFMLITPQSPIGEKLMSREVGDEVSINV-AGKRHHYEIVGI 189


>UniRef50_B4D7C3 GreA/GreB family elongation factor n=1 Tax=Chthoniobacter flavus
           Ellin428 RepID=B4D7C3_9BACT
          Length = 159

 Score = 40.1 bits (93), Expect = 0.022,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 46/119 (38%), Gaps = 19/119 (15%)

Query: 20  LEQPAYAGLPIADALNAELDRAQM----CSPEEMPHDV-VTMNSRVKFRNLSDGEVRVRT 74
             + +Y     +  L  EL++A+         + P    V + + +  +N    +V    
Sbjct: 47  ALEASYLARGQSRQLI-ELEKAKQEFESLDSADWPPKTPVEIGALLTLKNGPAEDVY--- 102

Query: 75  LVYPAKMTDSN-------TQLSVMAPVGAALLGLRVGDSIHWELPGGV-ATHLEVLELE 125
           L+ P              T ++  +P+G  L+G   GDSI   LP G      ++L ++
Sbjct: 103 LLGPRAGGIEVVCEGTPVTVITPQSPIGQLLIGKVAGDSIA--LPQGREQRRFKILRVQ 159


>UniRef50_C0A4E5 Putative uncharacterized protein n=1 Tax=Opitutaceae bacterium TAV2
           RepID=C0A4E5_9BACT
          Length = 193

 Score = 39.7 bits (92), Expect = 0.027,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 36/123 (29%), Gaps = 16/123 (13%)

Query: 18  ILLEQPAYAGLPIADALNAELDRAQMCSPE---EMPHDVVTMNSRVKFRNLSDGEVRVRT 74
            +  Q A         L  E+ RA               V   S V+  + +        
Sbjct: 72  DMHSQEAAYLAEGQARLAGEIARAIESYRALSLATSATHVETGSLVRLEDTATRRPIHYF 131

Query: 75  LVYPAKMT------DSNTQ------LSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVL 122
           +  P +          + +      L+  AP+G  LLG  +GD I      G      + 
Sbjct: 132 I-GPQRGGLTLTVAARDGRSVEITVLTPAAPLGRQLLGHTLGDEISLPGRRGKTAPARIT 190

Query: 123 ELE 125
           ++ 
Sbjct: 191 QIS 193


>UniRef50_A5W772 GreA/GreB family elongation factor n=5 Tax=Proteobacteria
           RepID=A5W772_PSEP1
          Length = 258

 Score = 39.7 bits (92), Expect = 0.027,   Method: Composition-based stats.
 Identities = 17/108 (15%), Positives = 36/108 (33%), Gaps = 10/108 (9%)

Query: 8   INDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDV-VTMNSRVKFRNLS 66
           I +   + + +     A      +  +   L   Q     +      V +++ V   N  
Sbjct: 140 IAENKYDTLGLEASYLATGQARRSAEIRQALVIYQQLLLRDYDPARGVQVSNLVTLENED 199

Query: 67  DGEVRVRTLVYPAKMTDSNTQ-------LSVMAPVGAALLGLRVGDSI 107
             + R+   + P        +       ++  +P+G  LLG RV D +
Sbjct: 200 GAQRRLF--LGPEAAGLKIGEGDGLVTVITPRSPLGQQLLGKRVDDEV 245


>UniRef50_A5F491 Putative uncharacterized protein n=31 Tax=Vibrio RepID=A5F491_VIBC3
          Length = 163

 Score = 39.7 bits (92), Expect = 0.029,   Method: Composition-based stats.
 Identities = 13/81 (16%), Positives = 27/81 (33%), Gaps = 1/81 (1%)

Query: 46  PEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGD 105
           P E     + +   V   +         TL       +    ++  + +GAALLG R  +
Sbjct: 67  PIERAPQRIKLGDTVSLVDAHRQLSFQVTLTTSENQHEVQGGVTCDSLLGAALLGRRQHE 126

Query: 106 SIHWELPGGVATHLEVLELEY 126
                +  G      +  +++
Sbjct: 127 VFTLSI-WGQPHCFAITHVQH 146


>UniRef50_D1QR39 Putative uncharacterized protein n=1 Tax=Prevotella oris F0302
           RepID=D1QR39_9BACT
          Length = 1194

 Score = 39.4 bits (91), Expect = 0.038,   Method: Composition-based stats.
 Identities = 11/73 (15%), Positives = 26/73 (35%), Gaps = 3/73 (4%)

Query: 55  TMNSRVKFRNLSDGEVRVRTLVYPAKMTDSN--TQLSVMAPVGAALLGLRVGDSIHWELP 112
           TM       N    +  +   V            +++  +P+G A++G +  D +   L 
Sbjct: 728 TMGPIHDIVNKQYEKAEIGQYVLIEYANGDRKVYRITSDSPLGIAVIGKKANDIVEVNLD 787

Query: 113 -GGVATHLEVLEL 124
                  ++V+ +
Sbjct: 788 YSRRKRKVKVIGI 800


>UniRef50_D1SQ94 Putative uncharacterized protein n=1 Tax=Acidovorax avenae subsp.
           avenae ATCC 19860 RepID=D1SQ94_9BURK
          Length = 1383

 Score = 39.4 bits (91), Expect = 0.041,   Method: Composition-based stats.
 Identities = 21/112 (18%), Positives = 36/112 (32%), Gaps = 3/112 (2%)

Query: 15  RIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRT 74
           R+  +  +        +  L A +   Q     E     V   + V  +N   GE    +
Sbjct: 754 RLYGMFRRNFDDVDVASAYLIAIIAGPQELPFMEEELTEVQPGTAVTLKNEL-GETVTLS 812

Query: 75  L--VYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
           L     + +      L+    V  +LLG+ VG  +    P G      V  +
Sbjct: 813 LDPAGLSGLPVREGMLAPSDDVARSLLGVAVGQQVSLPGPFGTELRFVVEGV 864


>UniRef50_A1AQR3 GreA/GreB family elongation factor n=4 Tax=Desulfuromonadales
           RepID=A1AQR3_PELPD
          Length = 172

 Score = 39.0 bits (90), Expect = 0.043,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 32/78 (41%), Gaps = 9/78 (11%)

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTD---SNTQ----LSVMAPVGAALLGLRVGDS 106
           + + + V  R   DG  +   +  P +         +    ++  +P+G +L+G + GD 
Sbjct: 96  IRLTALVTLRAGDDGTAKNVFI-GPREGGLKVMDQGEEVMVITPASPLGRSLIGRQQGDC 154

Query: 107 IHWELPGGVATHLEVLEL 124
           I      G     E++++
Sbjct: 155 IETGSGAG-IREYEIVQV 171


>UniRef50_B1ZXU0 GreA/GreB family elongation factor n=1 Tax=Opitutus terrae PB90-1
           RepID=B1ZXU0_OPITP
          Length = 204

 Score = 39.0 bits (90), Expect = 0.044,   Method: Composition-based stats.
 Identities = 20/104 (19%), Positives = 38/104 (36%), Gaps = 12/104 (11%)

Query: 44  CSPE---EMPHDVVTMN--SRVKFRNLSDGEVRVRT-LV---YPAKMTDSNTQ--LSVMA 92
             P        D + +   + ++ ++++       T LV           +    L   +
Sbjct: 91  VDPAAWLTKSTDTLQLGHVTTIEKQDVTTKRTHSFTFLVTTYGETASDPDSGLECLPHTS 150

Query: 93  PVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQPEAAGDYLL 136
           P+  A+LGL  G      LP G +  L ++ +    +A  D LL
Sbjct: 151 PLATAVLGLAAGAQTKVMLPAGESL-LTLISIRNPTQAELDRLL 193


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

UniRef50_Q2LTP9 Transcription elongation factor n=2 Tax=Deltapro...   159   2e-38
UniRef50_C5S652 GreA/GreB family elongation factor n=2 Tax=Prote...   157   1e-37
UniRef50_A6VVR5 GreA/GreB family elongation factor n=15 Tax=Prot...   153   2e-36
UniRef50_Q3BX42 Regulator of nucleoside diphosphate kinase n=9 T...   149   2e-35
UniRef50_P0AFW6 Regulator of nucleoside diphosphate kinase n=155...   149   3e-35
UniRef50_B5EI69 GreA/GreB family elongation factor n=6 Tax=Desul...   146   2e-34
UniRef50_A0LL17 GreA/GreB family elongation factor n=3 Tax=Bacte...   145   5e-34
UniRef50_B8GS58 GreA/GreB family elongation factor n=22 Tax=Prot...   144   9e-34
UniRef50_Q6MQZ8 Regulator of nucleoside diphosphate kinase n=1 T...   142   3e-33
UniRef50_Q1H3Z9 GreA/GreB family elongation factor n=1 Tax=Methy...   137   1e-31
UniRef50_C6RP41 GreA/GreB family elongation factor n=4 Tax=Acine...   137   1e-31
UniRef50_P64276 Transcription elongation factor greA n=48 Tax=de...   136   2e-31
UniRef50_Q7MD62 Transcription elongation factor n=10 Tax=Proteob...   136   2e-31
UniRef50_Q11P04 Transcription elongation factor n=1 Tax=Cytophag...   136   2e-31
UniRef50_Q1LSK1 Transcription elongation factor greA n=16 Tax=Pr...   136   3e-31
UniRef50_B9KH08 Transcription elongation factor n=9 Tax=Ricketts...   135   4e-31
UniRef50_A8HR94 Transcription elongation factor greA n=5 Tax=Pro...   135   4e-31
UniRef50_B3E3H5 Transcription elongation factor greA n=19 Tax=Pr...   135   5e-31
UniRef50_Q0A765 Transcription elongation factor greA n=23 Tax=Pr...   134   7e-31
UniRef50_B0SEQ9 Transcription elongation factor n=2 Tax=Leptospi...   133   1e-30
UniRef50_A4XNX9 GreA/GreB family elongation factor n=16 Tax=Bact...   132   3e-30
UniRef50_B9MBQ3 GreA/GreB family elongation factor n=6 Tax=Betap...   132   3e-30
UniRef50_B9NGJ6 Predicted protein n=12 Tax=cellular organisms Re...   132   4e-30
UniRef50_B2S6W5 Transcription elongation factor greA n=39 Tax=Ba...   132   4e-30
UniRef50_B5JTX6 Transcription elongation factor n=1 Tax=gamma pr...   130   1e-29
UniRef50_Q4HT85 Transcription elongation factor n=1 Tax=Campylob...   130   1e-29
UniRef50_Q13WN5 GreA/GreB family elongation factor n=50 Tax=Burk...   130   1e-29
UniRef50_C0QKN0 Transcription elongation factor n=1 Tax=Desulfob...   130   2e-29
UniRef50_B8G0E1 GreA/GreB family elongation factor n=2 Tax=Desul...   129   2e-29
UniRef50_Q7VM42 Transcription elongation factor greB n=27 Tax=Pr...   129   2e-29
UniRef50_C9P6Y2 Regulator of nucleoside diphosphate kinase n=1 T...   129   2e-29
UniRef50_Q7UVA0 Transcription elongation factor greA n=3 Tax=Pla...   129   2e-29
UniRef50_A3ESJ0 Transcription elongation factor n=4 Tax=Bacteria...   129   3e-29
UniRef50_A8F083 Transcription elongation factor greA n=13 Tax=Ri...   129   3e-29
UniRef50_A9GAI2 Regulator of nucleoside diphosphate kinase n=1 T...   129   3e-29
UniRef50_Q4KB20 Acetyltransferase, GNAT family family n=9 Tax=Ba...   129   3e-29
UniRef50_Q3K4S3 Regulator of nucleoside diphosphate kinase n=2 T...   129   4e-29
UniRef50_A6LPL4 Transcription elongation factor greA n=30 Tax=Cl...   129   4e-29
UniRef50_Q725M4 Transcription elongation factor greA n=4 Tax=Des...   128   6e-29
UniRef50_D2R891 Transcription elongation factor GreA n=1 Tax=Pir...   128   6e-29
UniRef50_B4UCU9 Transcription elongation factor greA n=588 Tax=B...   127   8e-29
UniRef50_A9MBQ4 GreA/GreB family elongation factor n=36 Tax=Bruc...   127   1e-28
UniRef50_C3X2V3 GreA/GreB family elongation factor n=2 Tax=Oxalo...   127   1e-28
UniRef50_Q057J4 Transcription elongation factor greA n=20 Tax=Pr...   127   1e-28
UniRef50_Q3SMM4 GreA/GreB family elongation factor n=1 Tax=Thiob...   127   1e-28
UniRef50_C6X5Q8 Transcription elongation factor n=1 Tax=Flavobac...   127   1e-28
UniRef50_D0LKY5 Transcription elongation factor n=1 Tax=Haliangi...   126   2e-28
UniRef50_A6X582 GreA/GreB family elongation factor n=3 Tax=Rhizo...   126   2e-28
UniRef50_Q04EK0 Transcription elongation factor greA n=4 Tax=Bac...   126   2e-28
UniRef50_A5V3E1 Transcription elongation factor greA n=13 Tax=Pr...   125   3e-28
UniRef50_Q1H0G6 GreA/GreB family elongation factor n=3 Tax=Prote...   125   4e-28
UniRef50_B2SQJ5 Regulator of nucleoside diphosphate kinase n=8 T...   125   4e-28
UniRef50_A0AIU5 Transcription elongation factor greA n=99 Tax=Ba...   125   5e-28
UniRef50_Q97EB6 Transcription elongation factor greA n=6 Tax=Clo...   125   5e-28
UniRef50_A5F052 Regulator of nucleoside diphosphate kinase n=31 ...   124   1e-27
UniRef50_Q74EX3 Nucleoside diphosphate kinase regulator protein,...   124   1e-27
UniRef50_D1B0C0 Transcription elongation factor n=4 Tax=Campylob...   123   1e-27
UniRef50_A5VGM9 GreA/GreB family elongation factor n=1 Tax=Sphin...   123   1e-27
UniRef50_Q8ZJH2 Transcription elongation factor greB n=165 Tax=P...   123   2e-27
UniRef50_C9RKD0 Transcription elongation factor n=1 Tax=Fibrobac...   123   2e-27
UniRef50_Q9HZY5 Transcription elongation factor greB n=13 Tax=Ga...   122   2e-27
UniRef50_C0N448 Putative uncharacterized protein n=1 Tax=Methylo...   122   3e-27
UniRef50_D1SYS0 GreA/GreB family elongation factor n=1 Tax=Acido...   122   3e-27
UniRef50_UPI00016C498C transcription elongation factor greA n=1 ...   122   3e-27
UniRef50_A6GQE5 Nucleoside diphosphate kinase regulator n=1 Tax=...   122   3e-27
UniRef50_D0J9T5 Transcription elongation factor n=55 Tax=Bacteri...   122   4e-27
UniRef50_C7GYY1 Transcription elongation factor n=1 Tax=Eubacter...   122   4e-27
UniRef50_A5CVW9 Transcription elongation factor greA n=4 Tax=Gam...   122   5e-27
UniRef50_Q2LR03 Transcription elongation factor greA n=1 Tax=Syn...   121   5e-27
UniRef50_A9WK05 Transcription elongation factor greA n=6 Tax=Chl...   121   5e-27
UniRef50_A6C278 Nucleoside diphosphate kinase regulator protein,...   121   6e-27
UniRef50_D1B632 Transcription elongation factor n=4 Tax=Synergis...   121   6e-27
UniRef50_Q096W9 Transcription elongation factor GreB n=1 Tax=Sti...   121   7e-27
UniRef50_C4XLU8 Transcription elongation factor greA n=11 Tax=De...   121   7e-27
UniRef50_Q88DU7 Transcription elongation factor greA n=83 Tax=Pr...   121   8e-27
UniRef50_C9RNS9 GreA/GreB family elongation factor n=1 Tax=Fibro...   120   1e-26
UniRef50_Q817Z6 Transcription elongation factor greA n=141 Tax=c...   120   1e-26
UniRef50_A0LK20 Transcription elongation factor greA n=1 Tax=Syn...   120   1e-26
UniRef50_A8SDG2 Transcription elongation factor n=2 Tax=Clostrid...   120   1e-26
UniRef50_Q2Y7V5 GreA/GreB family elongation factor n=33 Tax=cell...   120   1e-26
UniRef50_B1MX52 Transcription elongation factor greA n=11 Tax=Fi...   120   1e-26
UniRef50_B3PF63 Regulator of nucleoside diphosphate kinase n=1 T...   120   2e-26
UniRef50_A7HDS3 Transcription elongation factor GreB n=3 Tax=Myx...   120   2e-26
UniRef50_D0J5N8 Kelongation factor GreB n=4 Tax=Proteobacteria R...   119   2e-26
UniRef50_UPI0001C3129D transcription elongation factor GreA n=1 ...   119   2e-26
UniRef50_A5V983 GreA/GreB family elongation factor n=1 Tax=Sphin...   119   3e-26
UniRef50_A1TUC9 GreA/GreB family elongation factor n=4 Tax=Burkh...   119   3e-26
UniRef50_Q0BR49 Transcription elongation factor greB n=4 Tax=cel...   119   3e-26
UniRef50_D2T9B8 Transcription elongation factor greB n=3 Tax=Erw...   119   4e-26
UniRef50_A5FRA2 Transcription elongation factor n=3 Tax=Dehaloco...   119   4e-26
UniRef50_Q2GD99 Transcription elongation factor greA n=2 Tax=Neo...   119   4e-26
UniRef50_Q3SU57 GreA/GreB family elongation factor n=9 Tax=Brady...   118   7e-26
UniRef50_B8IFL5 GreA/GreB family elongation factor n=8 Tax=Methy...   118   7e-26
UniRef50_Q1H282 GreA/GreB family elongation factor n=2 Tax=Prote...   117   9e-26
UniRef50_A6W1U9 Transcription elongation factor GreB n=17 Tax=Ga...   117   1e-25
UniRef50_Q03RN4 Transcription elongation factor n=1 Tax=Lactobac...   117   1e-25
UniRef50_C6VSR5 GreA/GreB family elongation factor n=2 Tax=Sphin...   117   1e-25
UniRef50_C9KJ19 Transcription elongation factor n=1 Tax=Mitsuoke...   117   1e-25
UniRef50_Q67JL1 Transcription elongation factor n=2 Tax=Clostrid...   117   1e-25
UniRef50_Q1QUF3 GreA/GreB family elongation factor n=1 Tax=Chrom...   117   1e-25
UniRef50_Q88KH5 Transcription elongation factor greB n=84 Tax=Ga...   116   2e-25
UniRef50_C4Z9L9 Transcription elongation factor n=3 Tax=Firmicut...   116   2e-25
UniRef50_Q3ATA7 Transcription elongation factor greA n=13 Tax=Ba...   115   3e-25
UniRef50_C6WYK0 GreA/GreB family elongation factor n=2 Tax=Methy...   115   4e-25
UniRef50_Q30T56 Transcription elongation factor n=3 Tax=Campylob...   115   4e-25
UniRef50_Q2Z001 Transcription elongation factor n=1 Tax=uncultur...   115   4e-25
UniRef50_Q98Q16 Transcription elongation factor greA n=3 Tax=Myc...   115   5e-25
UniRef50_A8LN19 GreA/GreB family elongation factor n=8 Tax=Alpha...   115   5e-25
UniRef50_B4RF21 Transcription elongation factor n=2 Tax=cellular...   115   6e-25
UniRef50_Q1AU03 Transcription elongation factor n=1 Tax=Rubrobac...   114   1e-24
UniRef50_A2SJD8 Transcription elongation factor n=50 Tax=Proteob...   113   2e-24
UniRef50_C5BN87 Transcription elongation factor GreB n=5 Tax=Pro...   113   2e-24
UniRef50_Q04HS9 Transcription elongation factor greA n=90 Tax=Ba...   113   2e-24
UniRef50_A7IJH2 GreA/GreB family elongation factor n=4 Tax=Rhizo...   112   3e-24
UniRef50_Q5P744 Transcription elongation factor n=3 Tax=Proteoba...   112   3e-24
UniRef50_B0T7C4 GreA/GreB family elongation factor n=1 Tax=Caulo...   112   3e-24
UniRef50_D1PEW3 Transcription elongation factor n=1 Tax=Prevotel...   112   4e-24
UniRef50_A9EFF1 GreA/GreB family elongation factor n=1 Tax=Ocean...   112   4e-24
UniRef50_C0QWD9 Transcription elongation factor n=2 Tax=Brachysp...   111   5e-24
UniRef50_Q4A759 Transcription elongation factor greA n=4 Tax=Myc...   111   8e-24
UniRef50_B7L307 GreA/GreB family elongation factor n=1 Tax=Methy...   110   9e-24
UniRef50_C1XQ58 Transcription elongation factor n=2 Tax=Meiother...   110   9e-24
UniRef50_A6H247 Transcription elongation factor greA n=33 Tax=Ba...   110   1e-23
UniRef50_Q01RT9 GreA/GreB family elongation factor n=2 Tax=Acido...   110   1e-23
UniRef50_Q2S2N3 Transcription elongation factor n=1 Tax=Saliniba...   110   1e-23
UniRef50_C1F9R4 Transcription elongation factor GreA n=1 Tax=Aci...   110   1e-23
UniRef50_Q2N9J5 Transcription elongation factor n=2 Tax=Erythrob...   110   1e-23
UniRef50_Q9JVD0 Transcription elongation factor greB n=64 Tax=Ba...   110   1e-23
UniRef50_A2RGA4 Transcription elongation factor greA n=111 Tax=F...   110   2e-23
UniRef50_Q3Z8E7 Transcription elongation factor greA n=2 Tax=Deh...   109   2e-23
UniRef50_A7HFE1 GreA/GreB family elongation factor n=1 Tax=Anaer...   109   2e-23
UniRef50_A6NPJ1 Putative uncharacterized protein n=1 Tax=Bactero...   109   3e-23
UniRef50_Q98F06 Nucleoside diphosphate kinase regulator n=2 Tax=...   109   3e-23
UniRef50_B5ZLJ0 Transcription elongation factor GreB n=5 Tax=Pro...   109   3e-23
UniRef50_Q12SN9 Transcription elongation factor GreB n=17 Tax=Ba...   109   3e-23
UniRef50_Q8P7P8 Transcription elongation factor greB n=53 Tax=Pr...   109   3e-23
UniRef50_B2V1C0 Transcription elongation factor n=28 Tax=Clostri...   109   3e-23
UniRef50_B1H062 Transcription elongation factor n=1 Tax=uncultur...   109   3e-23
UniRef50_O51157 Transcription elongation factor greA n=23 Tax=Bo...   109   3e-23
UniRef50_A5VME9 Transcription elongation factor GreA n=49 Tax=La...   109   3e-23
UniRef50_A5IYH4 Transcription elongation factor greA n=3 Tax=Myc...   108   5e-23
UniRef50_UPI0001C37CEA transcription elongation factor GreA n=1 ...   108   6e-23
UniRef50_A4BB58 Nucleoside diphosphate kinase regulator n=1 Tax=...   108   6e-23
UniRef50_A4CMB9 Nucleoside diphosphate kinase regulator n=1 Tax=...   108   6e-23
UniRef50_Q1PYP5 Transcription elongation factor n=1 Tax=Candidat...   108   7e-23
UniRef50_B2KBD2 GreA/GreB family elongation factor n=1 Tax=Elusi...   108   7e-23
UniRef50_A1U1V6 GreA/GreB family elongation factor n=2 Tax=Marin...   108   7e-23
UniRef50_A6NZ08 Transcription elongation factor n=1 Tax=Bacteroi...   107   8e-23
UniRef50_C6XWY5 Transcription elongation factor GreA/GreB domain...   107   1e-22
UniRef50_B1ZU20 GreA/GreB family elongation factor n=1 Tax=Opitu...   107   1e-22
UniRef50_B1AIU2 Transcription elongation factor greA n=28 Tax=Ur...   107   1e-22
UniRef50_B5Y9H5 Transcription elongation factor n=1 Tax=Coprothe...   106   2e-22
UniRef50_Q2GA51 GreA/GreB family elongation factor n=1 Tax=Novos...   106   3e-22
UniRef50_Q2G8D8 GreA/GreB family elongation factor n=4 Tax=cellu...   105   3e-22
UniRef50_B0N6V6 Transcription elongation factor n=4 Tax=Bacteria...   105   3e-22
UniRef50_Q15Z69 GreA/GreB family elongation factor n=1 Tax=Pseud...   105   3e-22
UniRef50_A0LZA7 Transcription elongation factor n=1 Tax=Gramella...   105   4e-22
UniRef50_C7T958 Transcription elongation factor n=4 Tax=Lactobac...   105   4e-22
UniRef50_B3DVF3 Transcription elongation factor GreA fused to un...   105   4e-22
UniRef50_B3PM73 Transcription elongation factor greA n=1 Tax=Myc...   105   4e-22
UniRef50_A9BFC0 Transcription elongation factor greA n=12 Tax=Th...   105   4e-22
UniRef50_C7PP41 Transcription elongation factor n=1 Tax=Chitinop...   105   4e-22
UniRef50_B0T793 GreA/GreB family elongation factor n=1 Tax=Caulo...   105   4e-22
UniRef50_B7CAB2 Transcription elongation factor n=5 Tax=Erysipel...   105   4e-22
UniRef50_C0A6F4 GreA/GreB family elongation factor n=1 Tax=Opitu...   105   4e-22
UniRef50_D0KZQ0 Transcription elongation factor GreB n=1 Tax=Hal...   105   5e-22
UniRef50_B0P8A6 Transcription elongation factor n=1 Tax=Anaerotr...   105   5e-22
UniRef50_C8W826 Transcription elongation factor n=7 Tax=Coriobac...   105   5e-22
UniRef50_Q930S2 Putative uncharacterized protein n=1 Tax=Sinorhi...   105   5e-22
UniRef50_B0VIH5 Putative transcription elongation factor n=1 Tax...   105   5e-22
UniRef50_Q0BZP7 Regulatory protein n=1 Tax=Hyphomonas neptunium ...   105   5e-22
UniRef50_Q04UP0 Transcription elongation factor n=6 Tax=Leptospi...   104   7e-22
UniRef50_C1ZBG3 Transcription elongation factor n=1 Tax=Planctom...   104   7e-22
UniRef50_A7HAZ2 GreA/GreB family elongation factor n=5 Tax=Myxoc...   104   7e-22
UniRef50_UPI00017427C8 transcription elongation factor GreA n=1 ...   104   8e-22
UniRef50_Q5SKM1 Transcription elongation factor n=5 Tax=Thermus ...   104   8e-22
UniRef50_B9L0L0 Transcription elongation factor greA n=1 Tax=The...   104   9e-22
UniRef50_C6WVB7 GreA/GreB family elongation factor n=2 Tax=Methy...   104   9e-22
UniRef50_D2RL35 GreA/GreB family elongation factor n=3 Tax=Veill...   104   1e-21
UniRef50_A4E9C2 Transcription elongation factor n=1 Tax=Collinse...   104   1e-21
UniRef50_P47524 Transcription elongation factor greA n=4 Tax=Myc...   104   1e-21
UniRef50_B2S1W7 Transcription elongation factor greA n=6 Tax=Tre...   104   1e-21
UniRef50_C7N7T1 Transcription elongation factor n=1 Tax=Slackia ...   103   2e-21
UniRef50_B1ZZX3 GreA/GreB family elongation factor n=3 Tax=Verru...   103   2e-21
UniRef50_A6EMP4 Transcription elongation factor n=4 Tax=Bacteroi...   103   2e-21
UniRef50_B4RBL2 Transcription elongation factor n=1 Tax=Phenylob...   102   3e-21
UniRef50_A7VBG3 Putative uncharacterized protein n=1 Tax=Clostri...   102   3e-21
UniRef50_Q2SSM5 Transcription elongation factor greA n=6 Tax=Mol...   102   3e-21
UniRef50_B1XUH7 Transcription elongation factor GreB n=2 Tax=Pol...   102   4e-21
UniRef50_D0WJ76 Transcription elongation factor n=1 Tax=Slackia ...   102   4e-21
UniRef50_D1CDC6 Transcription elongation factor n=1 Tax=Thermoba...   102   5e-21
UniRef50_Q0B0N4 Transcription elongation factor greA n=6 Tax=Clo...   102   5e-21
UniRef50_A6EIL5 Nucleoside diphosphate kinase regulator protein,...   102   5e-21
UniRef50_D1C6T4 Transcription elongation factor n=1 Tax=Sphaerob...   102   5e-21
UniRef50_C4ZAT8 Transcription elongation factor GreA n=21 Tax=Fi...   101   6e-21
UniRef50_Q5QX12 Transcription elongation factor family protein n...   101   6e-21
UniRef50_A0LES5 GreA/GreB family elongation factor n=1 Tax=Syntr...   101   7e-21
UniRef50_A7HXN2 GreA/GreB family elongation factor n=1 Tax=Parvi...   101   7e-21
UniRef50_B9XT30 GreA/GreB family elongation factor n=1 Tax=bacte...   101   8e-21
UniRef50_UPI0001746370 transcript cleavage factor/unknown domain...   100   1e-20
UniRef50_D2PP26 Transcription elongation factor GreA n=3 Tax=Act...   100   2e-20
UniRef50_A5FHU8 GreA/GreB family elongation factor n=1 Tax=Flavo...   100   2e-20
UniRef50_B9XEY1 GreA/GreB family elongation factor n=1 Tax=bacte...    99   3e-20
UniRef50_C8S319 GreA/GreB family elongation factor n=1 Tax=Rhodo...    99   3e-20
UniRef50_Q88ZS9 Transcription elongation factor greA 1 n=7 Tax=L...    99   5e-20
UniRef50_B9KZF4 Transcription elongation factor greA n=2 Tax=The...    99   5e-20
UniRef50_B4W8F1 Putative uncharacterized protein n=1 Tax=Brevund...    99   6e-20
UniRef50_C6X3W9 Transcription elongation factor GreB n=1 Tax=Fla...    99   6e-20
UniRef50_A3HZU2 Transcription elongation factor GreB n=2 Tax=Bac...    99   6e-20
UniRef50_C0JZV3 Transcription elongation factor GreA n=1 Tax=unc...    98   8e-20
UniRef50_A3PS97 GreA/GreB family elongation factor n=4 Tax=Rhodo...    98   9e-20
UniRef50_UPI0000E87FB5 transcription elongation factor GreB n=1 ...    97   1e-19
UniRef50_A9NGN4 Transcription elongation factor greA n=7 Tax=Ach...    97   1e-19
UniRef50_Q9Z7G4 Transcription elongation factor greA n=13 Tax=Ch...    97   2e-19
UniRef50_B4D3Z7 GreA/GreB family elongation factor n=1 Tax=Chtho...    97   2e-19
UniRef50_D1R523 Putative uncharacterized protein n=1 Tax=Parachl...    96   3e-19
UniRef50_A4F866 Transcription elongation factor greA n=44 Tax=Ac...    96   3e-19
UniRef50_B9E669 Transcription elongation factor n=5 Tax=Clostrid...    96   3e-19
UniRef50_Q98F07 Nucleoside diphosphate kinase regulator; Rnk n=2...    96   4e-19
UniRef50_B8IHN9 GreA/GreB family elongation factor n=1 Tax=Methy...    95   6e-19
UniRef50_A9KJU6 GreA/GreB family elongation factor n=8 Tax=Clost...    95   6e-19
UniRef50_C7CFG6 Putative regulator n=1 Tax=Methylobacterium exto...    95   6e-19
UniRef50_Q1J0L4 Transcription elongation factor n=3 Tax=Deinococ...    95   7e-19
UniRef50_Q1CX76 Transcription elongation factor, GreA/GreB famil...    95   8e-19
UniRef50_Q4K5S3 Transcription elongation factor GreB n=3 Tax=Pse...    94   9e-19
UniRef50_C5BTE2 Transcription elongation factor GreA n=1 Tax=Ter...    94   1e-18
UniRef50_B4UMG4 GreA/GreB family elongation factor n=4 Tax=Anaer...    94   2e-18
UniRef50_UPI0001C31C12 transcription elongation factor GreA n=1 ...    94   2e-18
UniRef50_B4D5K0 GreA/GreB family elongation factor n=1 Tax=Chtho...    93   3e-18
UniRef50_A6STV7 Transcription elongation factor GreB n=2 Tax=Oxa...    93   3e-18
UniRef50_A0M1N1 GreA-like transcription elongation factor n=3 Ta...    92   3e-18
UniRef50_Q6MF39 Putative uncharacterized protein n=1 Tax=Candida...    92   5e-18
UniRef50_C1A2Y4 Transcription elongation factor greA n=41 Tax=Co...    92   5e-18
UniRef50_B2UNZ9 GreA/GreB family elongation factor n=1 Tax=Akker...    92   7e-18
UniRef50_Q11G80 GreA/GreB family elongation factor n=1 Tax=Chela...    91   8e-18
UniRef50_A1TE43 Transcription elongation factor greA n=11 Tax=Co...    91   8e-18
UniRef50_C7M0F0 GreA/GreB family elongation factor n=1 Tax=Acidi...    91   1e-17
UniRef50_Q848L1 GreA n=1 Tax=uncultured bacterium RepID=Q848L1_9...    91   1e-17
UniRef50_D2QK34 GreA/GreB family elongation factor n=1 Tax=Spiro...    91   1e-17
UniRef50_Q13CU9 Putative uncharacterized protein n=1 Tax=Rhodops...    88   6e-17
UniRef50_A6X2G5 GreA/GreB family elongation factor n=2 Tax=Ochro...    88   7e-17
UniRef50_C6B1R3 GreA/GreB family elongation factor n=16 Tax=cell...    88   8e-17
UniRef50_B9KMW2 Transcription elongation factor n=3 Tax=Rhodobac...    88   9e-17
UniRef50_B1ZQE9 GreA/GreB family elongation factor n=1 Tax=Opitu...    88   9e-17
UniRef50_B1ZD84 GreA/GreB family elongation factor n=4 Tax=Methy...    88   1e-16
UniRef50_A5FHJ3 GreA/GreB family elongation factor n=3 Tax=Flavo...    87   1e-16
UniRef50_A6SZ83 Transcription elongation factor, greA family n=2...    87   1e-16
UniRef50_B9J7D6 Transcription elongation factor protein n=52 Tax...    86   3e-16
UniRef50_D2KXD7 Transcription elongation factor n=1 Tax=Lactobac...    86   3e-16
UniRef50_B1I1G7 GreA/GreB family elongation factor n=1 Tax=Candi...    86   3e-16
UniRef50_C4L6P4 GreA/GreB family elongation factor n=1 Tax=Exigu...    85   5e-16
UniRef50_B4RDE4 Transcription elongation factor GreA/GreB, famil...    85   6e-16
UniRef50_B8DTJ6 Transcription elongation factor GreA n=15 Tax=Bi...    85   7e-16
UniRef50_A5D4X0 Putative uncharacterized protein n=1 Tax=Pelotom...    85   8e-16
UniRef50_Q5SJG6 Anti-cleavage anti-GreA transcription factor Gfh...    84   9e-16
UniRef50_C1ABM5 Transcription elongation factor GreA n=1 Tax=Gem...    84   1e-15
UniRef50_Q88Q22 Transcription elongation factor, putative n=11 T...    84   1e-15
UniRef50_C4RPW8 Transcription elongation factor n=1 Tax=Micromon...    84   1e-15
UniRef50_A0JU41 GreA/GreB family elongation factor n=21 Tax=Acti...    84   1e-15
UniRef50_B2GLP4 Transcription elongation factor n=3 Tax=Actinomy...    83   3e-15
UniRef50_Q0PQI1 Transcription elongation factor (Fragment) n=1 T...    82   6e-15
UniRef50_D2NP88 Transcription elongation factor n=2 Tax=Rothia m...    82   7e-15
UniRef50_A7HXN3 GreA/GreB family elongation factor n=1 Tax=Parvi...    81   8e-15
UniRef50_A6DK30 Putative uncharacterized protein n=1 Tax=Lentisp...    81   1e-14
UniRef50_C1CW74 Putative transcription elongation factor n=1 Tax...    81   1e-14
UniRef50_Q1IZY0 GreA/GreB family elongation factor n=4 Tax=Deino...    80   3e-14
UniRef50_B6BTF1 GreA/GreB family elongation factor n=2 Tax=Betap...    79   3e-14
UniRef50_A1A150 Transcription elongation factor GreA n=6 Tax=Bif...    79   5e-14
UniRef50_Q97HP4 Transcription elongation factor n=1 Tax=Clostrid...    79   6e-14
UniRef50_Q1IXC6 GreA/GreB family elongation factor n=1 Tax=Deino...    78   7e-14
UniRef50_Q9RRW0 Transcription elongation factor n=1 Tax=Deinococ...    78   8e-14
UniRef50_Q83FN6 Transcription elongation factor n=3 Tax=Micrococ...    78   9e-14
UniRef50_A3DJU3 GreA/GreB family elongation factor n=3 Tax=Clost...    77   1e-13
UniRef50_A1TEF4 GreA/GreB family elongation factor n=5 Tax=Actin...    77   1e-13
UniRef50_UPI0001746B72 nucleoside diphosphate kinase regulator p...    76   3e-13
UniRef50_C6XVH8 Transcription elongation factor n=1 Tax=Pedobact...    76   3e-13
UniRef50_UPI0001B58AC8 GreA/GreB family elongation factor n=1 Ta...    76   3e-13
UniRef50_Q1YFK5 Possible transcription elongation factor, GreA/G...    76   4e-13
UniRef50_B0T2S8 GreA/GreB family elongation factor n=15 Tax=Alph...    76   5e-13
UniRef50_A4T6M8 GreA/GreB family elongation factor n=3 Tax=Mycob...    75   9e-13
UniRef50_A4CMC2 Putative uncharacterized protein n=1 Tax=Robigin...    74   1e-12
UniRef50_C6UNA6 Putative transcription elongation factor GreA n=...    74   2e-12
UniRef50_D1N5G0 GreA/GreB family elongation factor n=1 Tax=Victi...    73   3e-12
UniRef50_C0QME5 GreA2 n=1 Tax=Desulfobacterium autotrophicum HRM...    72   4e-12
UniRef50_C0ZE34 Putative uncharacterized protein n=1 Tax=Breviba...    72   4e-12
UniRef50_B4RBL3 Transcription elongation factor GreA/GreB family...    72   5e-12
UniRef50_Q930S1 Putative uncharacterized protein n=1 Tax=Sinorhi...    69   5e-11
UniRef50_A5VFW5 GreA/GreB family elongation factor n=3 Tax=Sphin...    69   6e-11
UniRef50_A6NYB0 Putative uncharacterized protein n=1 Tax=Bactero...    68   7e-11
UniRef50_A4FCQ0 Transcription elongation factor G n=1 Tax=Saccha...    66   3e-10
UniRef50_UPI0001AF7314 transcription elongation factor GreA n=1 ...    66   4e-10
UniRef50_UPI0001AF7313 transcription elongation factor GreA n=1 ...    66   5e-10
UniRef50_Q2SLP2 Transcription elongation factor n=1 Tax=Hahella ...    64   1e-09
UniRef50_A8LPH9 Putative uncharacterized protein n=1 Tax=Dinoros...    64   1e-09
UniRef50_A9EFE9 Putative uncharacterized protein n=1 Tax=Oceanib...    63   3e-09
UniRef50_D0M4S6 Putative uncharacterized protein n=7 Tax=Vibrio ...    62   4e-09
UniRef50_D0J1H3 Putative uncharacterized protein n=1 Tax=Comamon...    62   7e-09
UniRef50_B1ZU18 GreA/GreB family elongation factor n=1 Tax=Opitu...    62   8e-09
UniRef50_C9Z2D0 Putative uncharacterized protein n=1 Tax=Strepto...    61   8e-09
UniRef50_A1RN18 GreA/GreB family elongation factor n=11 Tax=Shew...    61   9e-09
UniRef50_Q5QX13 Transcription elongation factor greA/greB family...    61   1e-08
UniRef50_Q2CH34 Putative uncharacterized protein n=2 Tax=Oceanic...    60   2e-08
UniRef50_Q67NL4 Putative transcription elongation factor n=1 Tax...    60   2e-08
UniRef50_C4DVL0 Transcription elongation factor n=1 Tax=Stackebr...    60   2e-08
UniRef50_C4DV10 Putative uncharacterized protein n=1 Tax=Stackeb...    60   3e-08
UniRef50_A0QE66 Transcription elongation factor GreA n=2 Tax=Myc...    60   3e-08
UniRef50_B9ZS32 GreA/GreB family elongation factor n=1 Tax=Thioa...    59   4e-08
UniRef50_Q0BS89 Transcription elongation factor greB n=1 Tax=Gra...    59   4e-08
UniRef50_D0M044 Transcription elongation factor n=15 Tax=Vibrion...    59   5e-08
UniRef50_Q1DFU3 GreA/GreB domain protein n=3 Tax=Myxococcales Re...    57   1e-07
UniRef50_D1CSU3 Transcription elongation factor (Fragment) n=1 T...    56   4e-07
UniRef50_C1YJ21 Transcription elongation factor n=3 Tax=Actinomy...    56   5e-07
UniRef50_A9EFU2 Nucleoside diphosphate kinase regulator n=1 Tax=...    55   9e-07
UniRef50_Q0VMM9 Putative uncharacterized protein n=2 Tax=Alcaniv...    53   3e-06
UniRef50_Q39Z43 GreA/GreB family elongation factor n=18 Tax=Prot...    53   3e-06
UniRef50_A3M8R9 Putative uncharacterized protein n=2 Tax=Acineto...    52   4e-06
UniRef50_B2IF32 DNA helicase, putative n=2 Tax=Rhizobiales RepID...    52   5e-06
UniRef50_C7MX98 Transcription elongation factor n=1 Tax=Saccharo...    51   1e-05
UniRef50_P65095 Uncharacterized protein Rv3788/MT3896 n=17 Tax=M...    51   1e-05
UniRef50_UPI0001AEE145 nucleoside diphosphate kinase regulator n...    49   3e-05

Sequences not found previously or not previously below threshold:

UniRef50_B1ZXU0 GreA/GreB family elongation factor n=1 Tax=Opitu...    55   8e-07
UniRef50_Q4K8S4 Putative uncharacterized protein n=1 Tax=Pseudom...    54   2e-06
UniRef50_Q3A1F8 GreA/GreB family elongation factor n=4 Tax=Desul...    51   1e-05
UniRef50_A4VNK9 Transcription elongation factor n=1 Tax=Pseudomo...    51   1e-05
UniRef50_A5W772 GreA/GreB family elongation factor n=5 Tax=Prote...    51   1e-05
UniRef50_A2VH02 Transcription elongation factor greA (Transcript...    50   2e-05
UniRef50_A1AQR3 GreA/GreB family elongation factor n=4 Tax=Desul...    50   2e-05
UniRef50_Q0F3H5 GreA/GreB family elongation factor n=1 Tax=Marip...    47   1e-04
UniRef50_Q1MZY3 Putative uncharacterized protein n=1 Tax=Bermane...    47   3e-04
UniRef50_A8H435 GreA/GreB family elongation factor n=2 Tax=Shewa...    46   3e-04
UniRef50_UPI0001B57B91 nucleoside diphosphate kinase regulator n...    46   3e-04
UniRef50_B6EH16 Putative uncharacterized protein n=1 Tax=Aliivib...    46   3e-04
UniRef50_A6VXC9 GreA/GreB family elongation factor n=2 Tax=Marin...    45   9e-04
UniRef50_C0A4E5 Putative uncharacterized protein n=1 Tax=Opituta...    44   0.001
UniRef50_B5FBA9 Transcription elongation factor n=2 Tax=Vibrio f...    44   0.001
UniRef50_A6D862 Putative uncharacterized protein n=1 Tax=Vibrio ...    44   0.002
UniRef50_B8CMM7 Transcription elongation factor n=1 Tax=Shewanel...    43   0.003
UniRef50_B2A7T5 Putative uncharacterized protein n=1 Tax=Natrana...    42   0.004
UniRef50_Q1K1G0 GreA/GreB family elongation factor n=1 Tax=Desul...    42   0.005
UniRef50_C0BIS2 GreA/GreB family elongation factor n=1 Tax=Flavo...    42   0.005
UniRef50_B4D7C3 GreA/GreB family elongation factor n=1 Tax=Chtho...    42   0.006
UniRef50_A8FVY8 Putative uncharacterized protein n=1 Tax=Shewane...    42   0.008
UniRef50_D1SQ94 Putative uncharacterized protein n=1 Tax=Acidovo...    41   0.009
UniRef50_A1SXZ5 GreA/GreB family elongation factor n=5 Tax=Gamma...    41   0.011
UniRef50_A5F491 Putative uncharacterized protein n=31 Tax=Vibrio...    41   0.012
UniRef50_A4CAX2 Putative uncharacterized protein n=1 Tax=Pseudoa...    40   0.029
UniRef50_C6X1H7 Putative uncharacterized protein n=2 Tax=Flavoba...    40   0.032
UniRef50_B9X9L2 Putative uncharacterized protein n=1 Tax=bacteri...    39   0.033
UniRef50_A2TUB1 Putative uncharacterized protein n=1 Tax=Dokdoni...    39   0.033
UniRef50_A0M6P4 Transcription elongation factor n=1 Tax=Gramella...    39   0.036
UniRef50_A9G528 Putative uncharacterized protein n=1 Tax=Sorangi...    39   0.041
UniRef50_B1ZZ43 Putative uncharacterized protein n=1 Tax=Opitutu...    39   0.063
UniRef50_UPI0000E0F7E8 hypothetical protein GHTCC_05724 n=1 Tax=...    39   0.068
UniRef50_D1QR39 Putative uncharacterized protein n=1 Tax=Prevote...    38   0.074

>UniRef50_Q2LTP9 Transcription elongation factor n=2 Tax=Deltaproteobacteria
           RepID=Q2LTP9_SYNAS
          Length = 134

 Score =  159 bits (404), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 61/136 (44%), Positives = 85/136 (62%), Gaps = 2/136 (1%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           M++  I + + D ER++ LLE         A +L AEL  A +   EEMP DVVTMNS V
Sbjct: 1   MNKRRIYVTEQDMERLEDLLETS--KKSEYARSLEAELVNAVVVPSEEMPPDVVTMNSCV 58

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
            F +L+ G     TLVYP +   ++ ++SV+APVG+AL+GL VG +I W +P G    L 
Sbjct: 59  CFEDLTTGNRETITLVYPGQANMASGRVSVLAPVGSALIGLSVGQTIEWPMPNGRKRRLR 118

Query: 121 VLELEYQPEAAGDYLL 136
           ++E+ YQPEAAGD+ L
Sbjct: 119 IVEVLYQPEAAGDFHL 134


>UniRef50_C5S652 GreA/GreB family elongation factor n=2 Tax=Proteobacteria
           RepID=C5S652_CHRVI
          Length = 171

 Score =  157 bits (398), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 65/133 (48%), Positives = 86/133 (64%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
           S+P II++ LDAER++ L+E       P  D L AEL RA++  P EMP +VV+MNS V+
Sbjct: 37  SQPKIILSSLDAERLENLIESLPRNAFPGMDELEAELARAEVVDPREMPPNVVSMNSTVR 96

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           FR +S  E    TLVYP  M  S  ++S++APVG+ALLGL  GD I W  PGG    + +
Sbjct: 97  FRVMSTNEAFTLTLVYPKDMDASGGKISILAPVGSALLGLSSGDEIEWPKPGGGVLRVRI 156

Query: 122 LELEYQPEAAGDY 134
            E+ YQPE AG+Y
Sbjct: 157 EEVTYQPERAGEY 169


>UniRef50_A6VVR5 GreA/GreB family elongation factor n=15 Tax=Proteobacteria
           RepID=A6VVR5_MARMS
          Length = 137

 Score =  153 bits (387), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 58/136 (42%), Positives = 88/136 (64%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           M RP I I+ LDA R++ +L+  +Y+  P  D L  E++RA++  P +MP ++VTMNS V
Sbjct: 2   MQRPQITISSLDAVRLEKILDSLSYSQFPNKDDLQEEINRAEIVEPRDMPDNIVTMNSTV 61

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
            F+ LS  +   +TLVYP     +   +SV+APVG+ALLGL+ GD I W  P G    + 
Sbjct: 62  TFKVLSSEKEFSKTLVYPKDANGAEDTVSVLAPVGSALLGLKEGDQIDWPKPNGDVLSVV 121

Query: 121 VLELEYQPEAAGDYLL 136
           +++++YQPE AG++ L
Sbjct: 122 IMKVDYQPERAGEFQL 137


>UniRef50_Q3BX42 Regulator of nucleoside diphosphate kinase n=9
           Tax=Gammaproteobacteria RepID=Q3BX42_XANC5
          Length = 146

 Score =  149 bits (378), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 58/131 (44%), Positives = 84/131 (64%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFR 63
           P+I+++  D  R++ LL+ PA+   P A AL+ EL RA++  P+++P DVVTM+SR++  
Sbjct: 11  PSILVSSHDLARLEALLDSPAFNKHPAATALSDELGRARVLPPDQIPGDVVTMHSRIECE 70

Query: 64  NLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLE 123
           +   GE    TLVYP +    + ++SV+APVG+ALLGL VG SI W  P G    L V  
Sbjct: 71  DQLHGERHTLTLVYPHEADVQHGRISVLAPVGSALLGLSVGQSIDWRTPDGRDLRLRVTA 130

Query: 124 LEYQPEAAGDY 134
           +  QP AAGD+
Sbjct: 131 VHDQPAAAGDF 141


>UniRef50_P0AFW6 Regulator of nucleoside diphosphate kinase n=155
           Tax=Enterobacteriaceae RepID=RNK_ECO57
          Length = 136

 Score =  149 bits (376), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 136/136 (100%), Positives = 136/136 (100%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV
Sbjct: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
           KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE
Sbjct: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120

Query: 121 VLELEYQPEAAGDYLL 136
           VLELEYQPEAAGDYLL
Sbjct: 121 VLELEYQPEAAGDYLL 136


>UniRef50_B5EI69 GreA/GreB family elongation factor n=6 Tax=Desulfuromonadales
           RepID=B5EI69_GEOBB
          Length = 143

 Score =  146 bits (369), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 52/137 (37%), Positives = 85/137 (62%), Gaps = 4/137 (2%)

Query: 3   RPTIIINDLDAERIDILLEQPAY---AGLPIADALNAELDRAQMCSPEEMPHDVVTMNSR 59
           +  +++ + D ER++ L+++              L  EL RA++  P  +P DV+TMNS+
Sbjct: 8   QRQVVVTEFDMERLEALIDKARSTQTRDSKNLKELGEELVRAEVVDPAGIPPDVITMNSK 67

Query: 60  VKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHL 119
           V  ++L   E  V TLV+P +   ++ ++S++APVG A++G R GD I W +PGG+  +L
Sbjct: 68  VCLQDLDSEEELVYTLVFPNEADLASGKISILAPVGTAMIGFRTGDRITWPVPGGM-KNL 126

Query: 120 EVLELEYQPEAAGDYLL 136
           +V ++ YQPEAAGDY L
Sbjct: 127 KVKKILYQPEAAGDYHL 143


>UniRef50_A0LL17 GreA/GreB family elongation factor n=3 Tax=Bacteria
           RepID=A0LL17_SYNFM
          Length = 141

 Score =  145 bits (366), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 50/140 (35%), Positives = 78/140 (55%), Gaps = 6/140 (4%)

Query: 2   SRPTIIINDLDAERIDILLE-----QPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTM 56
            R  I ++D D +R++ L+E     +           L  EL +A++ +   +P D VTM
Sbjct: 3   KRRKIYVSDYDMKRLEKLIELLSEDEWDDRDTKHLQVLEEELRKAEVVAARNIPRDTVTM 62

Query: 57  NSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVA 116
           NS+V+ ++L  G   +  LV+P +      ++SV+AP+G AL+G  VGD I W +P G  
Sbjct: 63  NSKVRVKDLDTGIETIYHLVFPGEADVKQNRISVLAPIGTALIGYAVGDVIQWNVPAGT- 121

Query: 117 THLEVLELEYQPEAAGDYLL 136
             L + E+ YQPEAAGD+ L
Sbjct: 122 KKLRIEEILYQPEAAGDFHL 141


>UniRef50_B8GS58 GreA/GreB family elongation factor n=22 Tax=Proteobacteria
           RepID=B8GS58_THISH
          Length = 137

 Score =  144 bits (363), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 59/133 (44%), Positives = 86/133 (64%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKF 62
           +P+I ++ LD +R++ LL+      L     L AEL+RA +  P ++P  +VTMNSRV+F
Sbjct: 4   QPSITLSSLDLDRLEHLLDSLPREALANHRQLLAELERANVVEPSQVPPTLVTMNSRVRF 63

Query: 63  RNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVL 122
           R   +G    RTLVYP+ M     ++SV+AP+G+ALLGL VGDSI W  P G   ++ ++
Sbjct: 64  RVEPEGREFQRTLVYPSGMDGDEEKISVLAPIGSALLGLSVGDSIAWPTPKGGEMNVRIM 123

Query: 123 ELEYQPEAAGDYL 135
           E+ YQPEAAG+  
Sbjct: 124 EILYQPEAAGEMH 136


>UniRef50_Q6MQZ8 Regulator of nucleoside diphosphate kinase n=1 Tax=Bdellovibrio
           bacteriovorus RepID=Q6MQZ8_BDEBA
          Length = 138

 Score =  142 bits (360), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 59/133 (44%), Positives = 83/133 (62%), Gaps = 3/133 (2%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFR 63
           P I++ D D  R+  L+ Q      P A+AL  EL RA + + +E+P +VVTMNSRV+F 
Sbjct: 9   PRILVTDQDFHRLSALVSQVEG---PFAEALEEELSRANVIAQKEIPKNVVTMNSRVQFL 65

Query: 64  NLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLE 123
           +   G+    TLVYP        +LS++APVG ALLGL VG  I+W+LP G +  L+V  
Sbjct: 66  DEVSGQESEMTLVYPQDAKLEEGRLSILAPVGIALLGLSVGQEINWKLPNGQSKKLKVQA 125

Query: 124 LEYQPEAAGDYLL 136
           + YQPEA+G++ L
Sbjct: 126 VTYQPEASGNFDL 138


>UniRef50_Q1H3Z9 GreA/GreB family elongation factor n=1 Tax=Methylobacillus
           flagellatus KT RepID=Q1H3Z9_METFK
          Length = 138

 Score =  137 bits (346), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 56/139 (40%), Positives = 82/139 (58%), Gaps = 4/139 (2%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPI---ADALNAELDRAQMCSPEEMPHDVVTMN 57
           M +  I +   D +R+  ++EQ    G P       L  EL R++    E++  DVVTMN
Sbjct: 1   MLQGAIQVTSFDMDRLFSMIEQLRKNGFPETDNLARLEDELARSEEVPSEQVGADVVTMN 60

Query: 58  SRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVAT 117
           SRV  R+ ++G     TLV+P+    S  ++SV+AP+G A+LG RVGD I W +PGG   
Sbjct: 61  SRVLLRDEANGHEMSCTLVFPSDADASANRISVVAPLGTAILGYRVGDVIDWAMPGG-VR 119

Query: 118 HLEVLELEYQPEAAGDYLL 136
              +L+++YQPEAAGD+ L
Sbjct: 120 QYRILKIDYQPEAAGDFHL 138


>UniRef50_C6RP41 GreA/GreB family elongation factor n=4 Tax=Acinetobacter
           RepID=C6RP41_ACIRA
          Length = 134

 Score =  137 bits (345), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 50/134 (37%), Positives = 73/134 (54%), Gaps = 1/134 (0%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           M++P III+  D  R++ +LE          + L  EL RA++  P E+P +VV+MN+RV
Sbjct: 1   MAKPNIIISSQDLHRLETMLEH-QSHMTQTIEHLEDELARAEVVEPHEIPANVVSMNTRV 59

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
                   E     LVYP        Q++V+AP+GAA+LGL  G  I W  P G    ++
Sbjct: 60  LITIAPSTEPTEIQLVYPHDFRGDKGQVNVLAPIGAAILGLAEGQEIEWPQPDGHLMKVK 119

Query: 121 VLELEYQPEAAGDY 134
           + ++ YQPE  GDY
Sbjct: 120 IEKVLYQPEREGDY 133


>UniRef50_P64276 Transcription elongation factor greA n=48 Tax=delta/epsilon
           subdivisions RepID=GREA_HELPJ
          Length = 164

 Score =  136 bits (344), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 31/135 (22%), Positives = 58/135 (42%), Gaps = 9/135 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADA--------LNAELDRAQMCSPEEMPHD 52
           + RP I+     A     L E   Y                L+  +  AQ+  P  + H+
Sbjct: 24  VERPNIVKEIDIARGHGDLKENAEYHAAKEKQRFIEARIVDLSEIVANAQVIDPSALAHN 83

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V+  S +K  NL + +    T+V   +   +   +S  +P+  +L+G   GD++  +LP
Sbjct: 84  KVSFGSTIKILNLDNDKEFSYTIVGSVESDPAKGLISFGSPIAKSLIGKSKGDAVSIQLP 143

Query: 113 GGVATHLEVLELEYQ 127
            G +   E+L++ Y+
Sbjct: 144 NGES-DFEILDIYYK 157


>UniRef50_Q7MD62 Transcription elongation factor n=10 Tax=Proteobacteria
           RepID=Q7MD62_VIBVY
          Length = 135

 Score =  136 bits (344), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 56/132 (42%), Positives = 86/132 (65%), Gaps = 2/132 (1%)

Query: 5   TIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRN 64
           +I ++ LD +RI  LLE+      P  + L  ELDRA + +P++MP ++VTMNS V+F  
Sbjct: 6   SICVSTLDMDRISALLEK-MANLSPELEKLENELDRANVLAPQQMPDNIVTMNSTVRFTF 64

Query: 65  LSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
           +   +V  +TLVYP ++ + +  +S+ APVG+ALLGL VG  + W +PGG    +E+LE+
Sbjct: 65  VGSDKVMEKTLVYPDQVRNPDD-VSIFAPVGSALLGLSVGQQLTWPMPGGAERTIEILEV 123

Query: 125 EYQPEAAGDYLL 136
            YQPE  G++ L
Sbjct: 124 TYQPERMGEFHL 135


>UniRef50_Q11P04 Transcription elongation factor n=1 Tax=Cytophaga hutchinsonii ATCC
           33406 RepID=Q11P04_CYTH3
          Length = 149

 Score =  136 bits (343), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 46/135 (34%), Positives = 73/135 (54%), Gaps = 4/135 (2%)

Query: 5   TIIINDLDAERIDILLEQPAYAGL---PIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
             IIN LD  RI   + +           A++L  EL   ++  PEE+P++VVTM+S V 
Sbjct: 16  RTIINKLDYSRIQQCINEAKQFKSISVVEANSLMNELKLGKLVEPEEIPNNVVTMHSIVT 75

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
              +   +     LVYP K    N ++S+ +P+  AL+G ++GD I W +P G+   +++
Sbjct: 76  IVFMDSNKRVEFQLVYPDKADVKNNKISIFSPIATALIGYQIGDEIEWCVPAGMT-KIKI 134

Query: 122 LELEYQPEAAGDYLL 136
             + YQPEAAG + L
Sbjct: 135 ESIAYQPEAAGHFNL 149


>UniRef50_Q1LSK1 Transcription elongation factor greA n=16 Tax=Proteobacteria
           RepID=GREA_BAUCH
          Length = 158

 Score =  136 bits (342), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 30/135 (22%), Positives = 56/135 (41%), Gaps = 10/135 (7%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEM-PH 51
           + RP II N  +A     L E   Y                + ++L  AQ+    ++ P 
Sbjct: 24  VRRPEIIRNIAEAREYGDLKENAEYHAAREQQGFCEGRIQEIESKLSHAQIIDVTKLFPS 83

Query: 52  DVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWEL 111
             V     V  +NL+  E +   +V   +    +  +S+ +P+   L+G + GD +  + 
Sbjct: 84  GKVVFGVTVSVQNLNINEEQTYRIVGDDEANFKHNLISISSPIARGLIGKKKGDIVLIKT 143

Query: 112 PGGVATHLEVLELEY 126
           P G     ++L++EY
Sbjct: 144 PRGE-VKYQILKIEY 157


>UniRef50_B9KH08 Transcription elongation factor n=9 Tax=Rickettsiales
           RepID=B9KH08_ANAMF
          Length = 174

 Score =  135 bits (341), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 31/137 (22%), Positives = 54/137 (39%), Gaps = 12/137 (8%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHDV 53
            RP II +  DA  +  L E   Y                L ++  RA++    E+  D 
Sbjct: 37  ERPKIIKSISDARELGDLSENAEYHAARERQGLVESKIMELESKRSRAEVIDVSELSGDT 96

Query: 54  VTMNSRVKF----RNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHW 109
           V   + V             V    +V   +   S   +S+ +P+  +LLG R GDS+  
Sbjct: 97  VMFGATVTVSVYDEQTDSTGVMQYQIVGEYEADVSKNMISIKSPLVLSLLGRREGDSVEV 156

Query: 110 ELPGGVATHLEVLELEY 126
           + P G     +++++E+
Sbjct: 157 KTPRGDYKIYQIMKIEF 173


>UniRef50_A8HR94 Transcription elongation factor greA n=5 Tax=Proteobacteria
           RepID=GREA_AZOC5
          Length = 157

 Score =  135 bits (341), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 30/134 (22%), Positives = 55/134 (41%), Gaps = 9/134 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHD 52
           + RP II    +A     L E   Y                L  ++ RA++    ++  D
Sbjct: 24  VERPRIISAISEARAHGDLSENAEYHAAKELQSLNEGRIAELEDKISRAEVIDVSKLSGD 83

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
           +V   + V   +    E RV  +V  ++      ++S+ +PV  AL+G + G S+    P
Sbjct: 84  IVKFGATVTLVDEDTEEERVWQIVGDSEADAKAGRISISSPVARALIGKKKGSSVEVVTP 143

Query: 113 GGVATHLEVLELEY 126
            G     E++E+ +
Sbjct: 144 KGA-RSFEIVEVRW 156


>UniRef50_B3E3H5 Transcription elongation factor greA n=19 Tax=Proteobacteria
           RepID=GREA_GEOLS
          Length = 158

 Score =  135 bits (340), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 30/134 (22%), Positives = 55/134 (41%), Gaps = 9/134 (6%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHDV 53
            RP +I +  +A     L E   Y                L  +L RA +     +  D 
Sbjct: 26  ERPKVIQDIAEARSHGDLSENAEYDAAKNRQGFIEGRIQELQGKLARAHVVDLTGLKPDK 85

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           V   + V   + +  E     +V   +      ++S  +PVG AL+G ++ DS+  ++P 
Sbjct: 86  VVFGATVTLYDTASEEEITYKIVGEDEADIKLGKISCTSPVGKALIGHKLDDSVKVKVPA 145

Query: 114 GVATHLEVLELEYQ 127
           G     E++E++Y+
Sbjct: 146 GT-KEYEIIEIKYE 158


>UniRef50_Q0A765 Transcription elongation factor greA n=23 Tax=Proteobacteria
           RepID=GREA_ALHEH
          Length = 158

 Score =  134 bits (339), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 30/135 (22%), Positives = 50/135 (37%), Gaps = 10/135 (7%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPH- 51
           + RP II    +A     L E   Y                +  +L  AQ+  P  +   
Sbjct: 24  VERPRIIQAIAEAREHGDLKENAEYHAAREQQSFVEGRIQEIEGKLSNAQVIDPAAVNAQ 83

Query: 52  DVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWEL 111
             V   + V   +   G+     +V   +       +SV +P+  AL+G   GD +  + 
Sbjct: 84  GKVIFGATVDLVDEDSGKEVTYQIVGEDEADIKQGLVSVNSPIARALIGKEEGDLVTVQA 143

Query: 112 PGGVATHLEVLELEY 126
           PGG     E++E+ Y
Sbjct: 144 PGGE-REYEIVEVRY 157


>UniRef50_B0SEQ9 Transcription elongation factor n=2 Tax=Leptospira biflexa serovar
           Patoc RepID=B0SEQ9_LEPBA
          Length = 138

 Score =  133 bits (336), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 45/137 (32%), Positives = 75/137 (54%), Gaps = 3/137 (2%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAG--LPIADALNAELDRAQMCSPEEMPHDVVTMNSR 59
           ++  I I +LD  R+  ++ + +           L  E++RAQ    +++P +VVTMNS 
Sbjct: 3   TKKKISITNLDYIRLKKMILEYSKRNKTDANVQDLLGEIERAQKVDSKQIPSNVVTMNSV 62

Query: 60  VKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHL 119
           ++ +NL   E +   LVYP        Q+S++AP+  A +G + GD I W +P G     
Sbjct: 63  IEIKNLEGIEFKEFRLVYPEDSNLDQNQISILAPIATASIGYKTGDVIFWNVPDG-VYRF 121

Query: 120 EVLELEYQPEAAGDYLL 136
           ++ E++YQPEA GD+ L
Sbjct: 122 QITEIKYQPEANGDFHL 138


>UniRef50_A4XNX9 GreA/GreB family elongation factor n=16 Tax=Bacteria
           RepID=A4XNX9_PSEMY
          Length = 135

 Score =  132 bits (334), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 64/132 (48%), Positives = 81/132 (61%), Gaps = 2/132 (1%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFR 63
           P I I  LD +R++ LL+     G P A AL AELDRA++   +E+P  +VTMNSRV  R
Sbjct: 5   PAITITRLDLQRLERLLDSLDEFG-PGAAALQAELDRAEVVGLDEVPAGLVTMNSRVHCR 63

Query: 64  NLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLE 123
             S G+    TLVYP         +S++APVG+ALLGL VG  I W  PGG    L +L 
Sbjct: 64  EESSGKDYHLTLVYPQDAGGE-GTVSILAPVGSALLGLSVGQHIDWPAPGGKQLKLTLLA 122

Query: 124 LEYQPEAAGDYL 135
           +EYQPEAAG+Y 
Sbjct: 123 VEYQPEAAGEYD 134


>UniRef50_B9MBQ3 GreA/GreB family elongation factor n=6 Tax=Betaproteobacteria
           RepID=B9MBQ3_DIAST
          Length = 135

 Score =  132 bits (333), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 61/134 (45%), Positives = 81/134 (60%), Gaps = 2/134 (1%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
            +P II++ LD ERI+ LLE+         +AL AELDRA +  P++MP +VVTMNS V+
Sbjct: 3   RKPHIILSSLDLERIEALLEKQTAPFPGR-EALEAELDRADVFDPKDMPPNVVTMNSTVR 61

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           F  L  G+    TLVYP +M  S  ++SV APVG ALLGL VGD      P G    + V
Sbjct: 62  FTLLETGKTNTLTLVYPKEMDGSGDKVSVFAPVGIALLGLGVGDEFQMPSPTG-QVTVRV 120

Query: 122 LELEYQPEAAGDYL 135
             +++QPE AG+  
Sbjct: 121 DAIDFQPENAGELH 134


>UniRef50_B9NGJ6 Predicted protein n=12 Tax=cellular organisms RepID=B9NGJ6_POPTR
          Length = 145

 Score =  132 bits (332), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 52/136 (38%), Positives = 83/136 (61%), Gaps = 3/136 (2%)

Query: 2   SRPT-IIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           SRP  + + +LD  R++ +  +       + + L+A L+RA + SP+ +P DVVTMNSRV
Sbjct: 12  SRPATLYLTELDVTRLEGIASRAG--TAELDEMLDALLERAAIVSPDAIPKDVVTMNSRV 69

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
                 + + R  TLVYP     +  +LSV++P+G ALLG R GD++ + LP G A  + 
Sbjct: 70  VCALEGEAKPRDWTLVYPDDADLATGRLSVLSPIGQALLGARSGDTVDYRLPDGRAQRVT 129

Query: 121 VLELEYQPEAAGDYLL 136
           ++E+ +QPEA+G + L
Sbjct: 130 IVEIAFQPEASGQFTL 145


>UniRef50_B2S6W5 Transcription elongation factor greA n=39 Tax=Bacteria
           RepID=GREA_BRUA1
          Length = 157

 Score =  132 bits (332), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 53/133 (39%), Gaps = 9/133 (6%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHDV 53
            RP II    +A     L E   Y              + L   + RA++    ++  D 
Sbjct: 25  ERPRIIEAIAEARAHGDLSENAEYHAAKEAQSLNEGRINELEDLVARAEVIDVSKLTGDR 84

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           +   + V   +    E ++  +V   +      ++S+ +P+  AL+G   GD+I    PG
Sbjct: 85  IKFGATVTMIDEDTEEEKIYQIVGDQEADVKEGRISISSPIARALIGKGEGDTIEVNAPG 144

Query: 114 GVATHLEVLELEY 126
           G     E++ L++
Sbjct: 145 GS-RSYEIIALKF 156


>UniRef50_B5JTX6 Transcription elongation factor n=1 Tax=gamma proteobacterium
           HTCC5015 RepID=B5JTX6_9GAMM
          Length = 138

 Score =  130 bits (328), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 53/135 (39%), Positives = 80/135 (59%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
           + P I + +LD  RI+ LLE+           L  EL R ++ S +E+  DVVTMNSRVK
Sbjct: 4   THPPITLPELDVARIESLLEKLDLKAKNNHTELFEELYRCRIVSSQEVSPDVVTMNSRVK 63

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           +  L   +    TL YP +++ ++  +S++AP+G+A++GL VG  I W LP G    L +
Sbjct: 64  YTRLDTQQQSTLTLCYPDQISRADDAVSILAPIGSAIIGLSVGQIIDWPLPNGKNAPLRI 123

Query: 122 LELEYQPEAAGDYLL 136
            EL +QPE +G+Y L
Sbjct: 124 DELLFQPERSGNYTL 138


>UniRef50_Q4HT85 Transcription elongation factor n=1 Tax=Campylobacter upsaliensis
           RM3195 RepID=Q4HT85_CAMUP
          Length = 161

 Score =  130 bits (328), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 34/134 (25%), Positives = 52/134 (38%), Gaps = 9/134 (6%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHDVV 54
           RP +++    A     L E   Y                L   L RAQ+  P    H+ V
Sbjct: 26  RPAVVVEIDVARSHGDLKENAEYHAAREKQALIESRIAELGGILSRAQVIDPASYEHESV 85

Query: 55  TMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGG 114
              S V   +L   +    TLV   +       +S+ +P+  A+LG + GD     LP G
Sbjct: 86  KFGSSVLIMDLESEKESKYTLVGTCESDLEKGYISIASPLARAMLGKKEGDEFKVRLPKG 145

Query: 115 VATHLEVLELEYQP 128
            +   E+L + Y+P
Sbjct: 146 ES-EFEILSVTYEP 158


>UniRef50_Q13WN5 GreA/GreB family elongation factor n=50 Tax=Burkholderia
           RepID=Q13WN5_BURXL
          Length = 136

 Score =  130 bits (328), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 44/135 (32%), Positives = 72/135 (53%), Gaps = 1/135 (0%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
              T  + +LD  R++        A   + D L+  L+RA +    E+P +VVTMNS+  
Sbjct: 3   KTKTCYLTELDVARLEKHA-AAPGADARLQDMLDDVLERAVIVDSHEIPANVVTMNSQAT 61

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
             + + GE    T+VYP     ++ +L+V +P G ALLG + G+ I +  P G    L++
Sbjct: 62  LVDETSGEHMTWTVVYPPNADFAHGRLNVFSPAGLALLGAKRGERIRFTPPSGTEKVLKL 121

Query: 122 LELEYQPEAAGDYLL 136
            ++ +QPEAA D+ L
Sbjct: 122 EKILFQPEAADDFTL 136


>UniRef50_C0QKN0 Transcription elongation factor n=1 Tax=Desulfobacterium
           autotrophicum HRM2 RepID=C0QKN0_DESAH
          Length = 175

 Score =  130 bits (327), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 34/132 (25%), Positives = 54/132 (40%), Gaps = 9/132 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHD 52
           + RP  I     A     L E   +                L  ++  A++  P  +  D
Sbjct: 44  IERPQNIKAIEIARAHGDLSENAEFDAAKDRQSFIEGRIGELGYKIASAKIIDPATVSKD 103

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V   SRV   NL  GE     +V   +      ++SV +P+G ALLG + GD I  + P
Sbjct: 104 CVRFASRVVIENLDSGEEVEYMIVGQEESDIHKGKISVSSPLGMALLGKQPGDEIVIQAP 163

Query: 113 GGVATHLEVLEL 124
           GG   + E++++
Sbjct: 164 GGK-RNYEIVDI 174


>UniRef50_B8G0E1 GreA/GreB family elongation factor n=2 Tax=Desulfitobacterium
           hafniense RepID=B8G0E1_DESHD
          Length = 138

 Score =  129 bits (326), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 57/140 (40%), Positives = 82/140 (58%), Gaps = 6/140 (4%)

Query: 1   MSRPTIIINDLDAERIDILL-EQPAYAGLPIADAL---NAELDRAQMCSPEEMPHDVVTM 56
           MSR  I I  +D ER+  L+ ++  +      D L     EL+ A +   E++P + +TM
Sbjct: 1   MSR-KISITAVDRERLLKLINKEREFGSAKNKDYLKDLEHELNGADVVPSEKIPGNAITM 59

Query: 57  NSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVA 116
           NSR+  ++L  GE  V TLVYP        ++S++APVG A+LG   GD I W++PGGV 
Sbjct: 60  NSRILLKDLETGEETVYTLVYPEDADLLEDKISILAPVGTAILGYLEGDIIDWKVPGGVV 119

Query: 117 THLEVLELEYQPEAAGDYLL 136
              +V ++ YQPEAAGDY L
Sbjct: 120 R-FKVEKILYQPEAAGDYHL 138


>UniRef50_Q7VM42 Transcription elongation factor greB n=27 Tax=Proteobacteria
           RepID=GREB_HAEDU
          Length = 162

 Score =  129 bits (326), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 50/134 (37%), Gaps = 10/134 (7%)

Query: 2   SRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMPHDV 53
            RP +  +  +A  +    E   Y                L+  L+  Q+          
Sbjct: 26  ERPKVTQSVSEAAALGDRSENAEYIYGKRRLREIDRRIRFLSKRLEALQIIDYHPQQAGK 85

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           V   + ++  N ++GE+    +V   +   +   +S+ +PV  AL+G  V D I  + P 
Sbjct: 86  VFFGAWIELEN-NEGEINQYRIVGCDEFDPTKNWISIDSPVARALIGKCVDDEIEVQTPT 144

Query: 114 GVATHLEVLELEYQ 127
           G A    + ++ Y 
Sbjct: 145 GKAVFY-INKIWYD 157


>UniRef50_C9P6Y2 Regulator of nucleoside diphosphate kinase n=1 Tax=Vibrio
           metschnikovii CIP 69.14 RepID=C9P6Y2_VIBME
          Length = 136

 Score =  129 bits (326), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 54/131 (41%), Positives = 81/131 (61%), Gaps = 2/131 (1%)

Query: 5   TIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRN 64
            II++ LD +RI  L+++         + L  ELDRA + +PEE+P DVVTMNS VKF+ 
Sbjct: 7   AIIVSTLDMDRISALMDKLP-KLSKELERLENELDRATVLNPEEIPADVVTMNSTVKFKF 65

Query: 65  LSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
               +V  +TLVYP  +  ++  +S+ APVG+ALLGL  G  + W +P GV   +E++++
Sbjct: 66  QGSDDVMQKTLVYPHDVKGNDD-ISIFAPVGSALLGLSKGQQLTWPMPNGVERTIEIIDI 124

Query: 125 EYQPEAAGDYL 135
             QPE  G+Y 
Sbjct: 125 IDQPERNGEYN 135


>UniRef50_Q7UVA0 Transcription elongation factor greA n=3 Tax=Planctomycetaceae
           RepID=GREA_RHOBA
          Length = 159

 Score =  129 bits (326), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 54/131 (41%), Gaps = 9/131 (6%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHDVVT 55
           P I+    +A     L E   Y              + L  ++ RA +     +P D V 
Sbjct: 28  PMIVQKIAEAREEGDLKENAEYHAQRENQGMLMAKINELRDKIARASIIDVSSLPKDEVV 87

Query: 56  MNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGV 115
               V   +++ G+    TLV        + ++ V +P G  L+G +VG++   ++P G 
Sbjct: 88  FGCTVTVEDVAYGDEEQFTLVGAGDEDYDSGKILVTSPFGQGLVGKKVGETAEVDVPAGK 147

Query: 116 ATHLEVLELEY 126
               ++L++E+
Sbjct: 148 -LKFKILKIEF 157


>UniRef50_A3ESJ0 Transcription elongation factor n=4 Tax=Bacteria RepID=A3ESJ0_9BACT
          Length = 160

 Score =  129 bits (325), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 32/133 (24%), Positives = 53/133 (39%), Gaps = 9/133 (6%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHDVV 54
           RP  I +  +A     L E   Y                L A++  A + S     H  +
Sbjct: 26  RPKNIQDIAEARAHGDLSENAEYHAAKERQGFINSRIKELEAKIASAIVVSSAHQDHSRI 85

Query: 55  TMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGG 114
           T  + V+   L   E +  TLV   +      ++SV +PVG AL+G   G+++   +P G
Sbjct: 86  TFGATVRLVPLDSKEEKRYTLVGQEEADLKAGRISVHSPVGKALIGHSEGETVTIRVPAG 145

Query: 115 VATHLEVLELEYQ 127
                 + E+ Y+
Sbjct: 146 EVQ-YTIAEIFYE 157


>UniRef50_A8F083 Transcription elongation factor greA n=13 Tax=Rickettsia
           RepID=GREA_RICCK
          Length = 162

 Score =  129 bits (325), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 28/136 (20%), Positives = 51/136 (37%), Gaps = 9/136 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHD 52
           + R  I  +  +A     L E   Y                L     RA++    ++  D
Sbjct: 25  VERKKISEDIAEAREHGDLSENAEYEAAREKQAFIEGRIKELEDMAARAEIIDISKLSGD 84

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            +   + V   +    E     +V   +   +  ++S+ +P+  AL+G  VGD +    P
Sbjct: 85  NIKFGATVTLIDDDTEEKVTYIVVGEYEADITRKRVSIASPIAKALIGKSVGDFVEVTTP 144

Query: 113 GGVATHLEVLELEYQP 128
            G     EV+E+EY+ 
Sbjct: 145 KGS-KSYEVVEVEYKA 159


>UniRef50_A9GAI2 Regulator of nucleoside diphosphate kinase n=1 Tax=Sorangium
           cellulosum 'So ce 56' RepID=A9GAI2_SORC5
          Length = 140

 Score =  129 bits (325), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 48/135 (35%), Positives = 74/135 (54%), Gaps = 4/135 (2%)

Query: 5   TIIINDLDAERIDILLEQPAYA---GLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
            I++ + D +R+  LLE          P  +AL  E++RA +  P ++P +VVTMNSRV+
Sbjct: 7   PIVLTEFDRDRLARLLEALRARPGGDSPNLEALEIEIERADVVKPADIPPNVVTMNSRVE 66

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
             +L   E    T+V+P      + ++SV+AP+G ALLG R  D + W  P      L +
Sbjct: 67  LVDLDTEERLCVTVVFPGNADVKSGRISVLAPMGLALLGCREADEVEWPTPS-RTRRLRI 125

Query: 122 LELEYQPEAAGDYLL 136
             + YQPEA+G + L
Sbjct: 126 ERIAYQPEASGRFDL 140


>UniRef50_Q4KB20 Acetyltransferase, GNAT family family n=9 Tax=Bacteria
           RepID=Q4KB20_PSEF5
          Length = 379

 Score =  129 bits (325), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 44/132 (33%), Positives = 71/132 (53%), Gaps = 6/132 (4%)

Query: 5   TIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRN 64
            I I ++D  R++ L+    +   P    L  EL+RA +  P+++  +V+TMNSR   + 
Sbjct: 254 EIYITEIDKARLESLI---VFEQGPTIVELEHELERAIVVKPQQVARNVITMNSRALLQL 310

Query: 65  LSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
               E     LVYP     +  + SV + +GAA+LG + GD+I W +       +E+ ++
Sbjct: 311 DD--EEIEVALVYPEDADSTAGKHSVYSDIGAAILGYQEGDTIDWRISD-RTRRIEIRKV 367

Query: 125 EYQPEAAGDYLL 136
            YQPEAAGD+ L
Sbjct: 368 LYQPEAAGDFHL 379


>UniRef50_Q3K4S3 Regulator of nucleoside diphosphate kinase n=2 Tax=Pseudomonas
           fluorescens RepID=Q3K4S3_PSEPF
          Length = 136

 Score =  129 bits (324), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 57/135 (42%), Positives = 79/135 (58%), Gaps = 2/135 (1%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRA-QMCSPEEMPHDVVTMNSR 59
           M+ P+I +  LD +R++ L++        +   L  ELDRA  +   +E+P DVVTMNSR
Sbjct: 1   MTAPSITLTRLDVQRLERLIDSLDDTLPGVIA-LQTELDRADTLVGHDEVPADVVTMNSR 59

Query: 60  VKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHL 119
           V  R  S G+    TLVYP        ++S++APVG+ALLGL+VG  I W  PGG    L
Sbjct: 60  VHCREESSGKDYHLTLVYPKHANADEGKVSILAPVGSALLGLKVGQHIDWPAPGGKTLKL 119

Query: 120 EVLELEYQPEAAGDY 134
            +LE+E QP   GD+
Sbjct: 120 TLLEVESQPSNGGDF 134


>UniRef50_A6LPL4 Transcription elongation factor greA n=30 Tax=Clostridia
           RepID=GREA_CLOB8
          Length = 160

 Score =  129 bits (324), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 35/134 (26%), Positives = 56/134 (41%), Gaps = 9/134 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHD 52
           + R  I      A     L E   Y                L   L  A +    E+P D
Sbjct: 27  VKRKEITEKIKIALGYGDLSENSEYDEAKNDQAFTEGRIIQLENMLKNAVVVDESEIPSD 86

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
           +V++ S+VK ++    E    ++V  A+    N ++S  +PVG AL+G +VGD +   +P
Sbjct: 87  IVSVGSKVKVKDYEFDEEVEYSIVGSAEADPMNFKISNESPVGNALVGKKVGDVVEVTVP 146

Query: 113 GGVATHLEVLELEY 126
            GV    E+L +  
Sbjct: 147 DGVN-KFEILGISR 159


>UniRef50_Q725M4 Transcription elongation factor greA n=4 Tax=Desulfovibrionaceae
           RepID=GREA_DESVH
          Length = 163

 Score =  128 bits (322), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 31/133 (23%), Positives = 54/133 (40%), Gaps = 9/133 (6%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHDV 53
            RP +I    +A     L E   Y                + + + +  +   + +  D 
Sbjct: 24  ERPGVIQAIKEAREEGDLSENAGYDAARERQGMLEARIKYIESRMAQFNVIDLDTISGDK 83

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           V   + VK  +L  GE +  TL+ P +   +   +SV +PV  A+LG   GD I  + P 
Sbjct: 84  VMFGATVKIEDLESGEEKEYTLLGPDEADYAKGSISVQSPVARAMLGKEEGDEIVVDAPR 143

Query: 114 GVATHLEVLELEY 126
           G   H E++ + +
Sbjct: 144 GKI-HYEIVSIRF 155


>UniRef50_D2R891 Transcription elongation factor GreA n=1 Tax=Pirellula staleyi DSM
           6068 RepID=D2R891_9PLAN
          Length = 164

 Score =  128 bits (322), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 34/132 (25%), Positives = 56/132 (42%), Gaps = 9/132 (6%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLPIADAL--------NAELDRAQMCSPEEMPHDVVT 55
           P I     DA     L E   Y     A  L          +L +A +  P  MP D V+
Sbjct: 28  PDITQKIADARAEGDLKENAEYHAQREAQGLLQAKINLIRNKLSKASIIDPSTMPRDQVS 87

Query: 56  MNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGV 115
             + V  +++   E    TLV   +   +  ++ + +P+G AL+G ++GD +    P G 
Sbjct: 88  FGTTVLVKDIDMDEEEEFTLVGAGEEDYNAGRILITSPLGQALVGKKIGDVVDVPAPKGS 147

Query: 116 ATHLEVLELEYQ 127
              LE+L L++ 
Sbjct: 148 -YQLEILTLKFD 158


>UniRef50_B4UCU9 Transcription elongation factor greA n=588 Tax=Bacteria
           RepID=GREA_ANASK
          Length = 166

 Score =  127 bits (321), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 48/134 (35%), Gaps = 9/134 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHD 52
           + RP I+    +A     L E   Y                +   +  A++    +   D
Sbjct: 24  VERPKIVKEIAEARAHGDLSENAEYHAAKEKQSHIEGRIAQVEHWIASAEVIDVTKHAGD 83

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V   + V   +   G+     +V   +      ++SV +P+  AL+G   GD++    P
Sbjct: 84  RVVFGATVSLEDAESGDQVTYRIVGELEADLKQGKISVTSPIARALIGRSEGDTVVVRSP 143

Query: 113 GGVATHLEVLELEY 126
           GG     E+  + +
Sbjct: 144 GGE-KEYEIQSVAF 156


>UniRef50_A9MBQ4 GreA/GreB family elongation factor n=36 Tax=Brucella
           RepID=A9MBQ4_BRUC2
          Length = 169

 Score =  127 bits (320), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 46/123 (37%), Positives = 73/123 (59%), Gaps = 1/123 (0%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
            +P I+++++D ER+  L    +     IA+ L AELDRA++ + + +P +VV M S V+
Sbjct: 7   KKPNIVVSEVDYERLMGLASNASERFEEIAEELMAELDRAKVVTAKRIPENVVQMGSTVE 66

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           FR  +DG  R  TLVYP +   +  ++S++ P+G AL+GL  G SI W    G    L V
Sbjct: 67  FR-ANDGHERRVTLVYPGEADIAKNRISILTPIGTALIGLAPGQSISWTARDGKQHELNV 125

Query: 122 LEL 124
           L++
Sbjct: 126 LKV 128


>UniRef50_C3X2V3 GreA/GreB family elongation factor n=2 Tax=Oxalobacter formigenes
           RepID=C3X2V3_OXAFO
          Length = 140

 Score =  127 bits (320), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 51/124 (41%), Positives = 73/124 (58%), Gaps = 1/124 (0%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
            RP I +   D ER++ +L    Y  +P    L  ELDRA +  PEE+P DV+T+NS  +
Sbjct: 13  ERPPITVTTHDYERLEQMLRNAKYRNIPGMADLQRELDRANVVEPEELPEDVITINSTAR 72

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           F +    +    TLVYP K    + ++SV+APVG+ALLGL  G SI W++PG     L V
Sbjct: 73  FIDDCTNDQYEITLVYPDKADGVS-KISVLAPVGSALLGLSAGQSIPWQVPGRQKLQLRV 131

Query: 122 LELE 125
           L+++
Sbjct: 132 LDVK 135


>UniRef50_Q057J4 Transcription elongation factor greA n=20 Tax=Proteobacteria
           RepID=GREA_BUCCC
          Length = 159

 Score =  127 bits (320), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 30/135 (22%), Positives = 55/135 (40%), Gaps = 10/135 (7%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIAD--------ALNAELDRAQMCSPEEMP-H 51
           ++RP I+    +A ++  L E   Y                +  +L RAQ+    ++P  
Sbjct: 25  ITRPCIVKAIANARQLGDLKENAEYHSAREEQSFCENRICEIENKLLRAQIIDITKIPFK 84

Query: 52  DVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWEL 111
            +V   S V    +S   + V T+V   +       +S+ +P+  AL+G +  D I    
Sbjct: 85  GIVIFGSTVTVLQISTSNIFVYTIVGDDEANYKEFSISIHSPMSRALIGKKKNDIIKVNT 144

Query: 112 PGGVATHLEVLELEY 126
           P G      + ++EY
Sbjct: 145 PTGYI-KYIIKKIEY 158


>UniRef50_Q3SMM4 GreA/GreB family elongation factor n=1 Tax=Thiobacillus
           denitrificans ATCC 25259 RepID=Q3SMM4_THIDA
          Length = 138

 Score =  127 bits (319), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 61/134 (45%), Positives = 80/134 (59%), Gaps = 1/134 (0%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
           +RP I +++ D ER++ +L        P A+AL  ELDRA++  PE MP DVVTMNSR++
Sbjct: 5   TRPAITVSERDLERLEDMLAGLPDDL-PGAEALRDELDRAEILRPEAMPADVVTMNSRIR 63

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           F     G+    TLVYP   T S  QL V  P G A+LGL VG  I W+ P G      +
Sbjct: 64  FVVEPAGKEMEMTLVYPRDFTGSPDQLPVTTPAGIAVLGLAVGQEIEWQAPNGQKVGARI 123

Query: 122 LELEYQPEAAGDYL 135
           ++L YQPE AGDY+
Sbjct: 124 VDLAYQPERAGDYM 137


>UniRef50_C6X5Q8 Transcription elongation factor n=1 Tax=Flavobacteriaceae bacterium
           3519-10 RepID=C6X5Q8_FLAB3
          Length = 170

 Score =  127 bits (319), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 48/137 (35%), Positives = 72/137 (52%), Gaps = 6/137 (4%)

Query: 4   PTIIINDLDAERI----DILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSR 59
             III   D+ RI        +  +      A+ L  EL  A++    ++P DVVTMNS 
Sbjct: 36  KQIIITKQDSTRIHKSIMDAKKNNSIKAE-DAERLLRELHSAKIVESADIPADVVTMNSV 94

Query: 60  VKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHL 119
           VK    ++  V    +VYP +    + ++S+ +PV AAL+G  V D I W +P G+   +
Sbjct: 95  VKIHFENNKTVTEFKIVYPEQANIKDRKISIFSPVAAALIGYSVNDEIDWIVPSGMTKII 154

Query: 120 EVLELEYQPEAAGDYLL 136
            + E+ YQPEAAGD+ L
Sbjct: 155 -IDEIIYQPEAAGDFDL 170


>UniRef50_D0LKY5 Transcription elongation factor n=1 Tax=Haliangium ochraceum DSM
           14365 RepID=D0LKY5_HALO1
          Length = 169

 Score =  126 bits (317), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 29/136 (21%), Positives = 54/136 (39%), Gaps = 9/136 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHD 52
           + RP        A     L E   Y                  A+L  +++  P ++  +
Sbjct: 25  VDRPANAKAIEVARGHGDLSENADYDAAKEEQGMIEARIREYEAKLALSEVIDPTKLSGE 84

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V   + V   ++  G+    T+V   +    N ++SV APV  AL+G  +GD    + P
Sbjct: 85  RVKFGATVTVEDIDTGDEATYTIVGEHEADIKNKRISVTAPVARALIGKAIGDETQVQTP 144

Query: 113 GGVATHLEVLELEYQP 128
            G     E++++++ P
Sbjct: 145 KGT-RAFEIVDVKWLP 159


>UniRef50_A6X582 GreA/GreB family elongation factor n=3 Tax=Rhizobiales
           RepID=A6X582_OCHA4
          Length = 142

 Score =  126 bits (317), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 44/124 (35%), Positives = 72/124 (58%), Gaps = 1/124 (0%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
            +P I+++++D ER+  L    +     IA+ L  ELDRA++   + +P +V+ M S V+
Sbjct: 7   KKPNIVVSEIDYERLMGLATNVSERLEEIAEELMVELDRAKVVPAKRLPQNVIHMGSTVE 66

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           FR+ +DG+ R  TLVYP +   +  ++S++ P+G AL+GL  G SI W    G    L V
Sbjct: 67  FRS-NDGQERRVTLVYPGEADIAQGKISILTPIGTALIGLAPGQSISWTARDGKQHELNV 125

Query: 122 LELE 125
           L + 
Sbjct: 126 LSVS 129


>UniRef50_Q04EK0 Transcription elongation factor greA n=4 Tax=Bacilli
           RepID=GREA_OENOB
          Length = 162

 Score =  126 bits (317), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 31/132 (23%), Positives = 54/132 (40%), Gaps = 8/132 (6%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHDV 53
            RP I     +A     L E   Y                L   +  AQ+        +V
Sbjct: 28  KRPAITSRIQEARSFGDLSENSEYQSAKDEQAFVEGRVKQLQQMIQFAQVIDASSASKNV 87

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           VT+  ++ F+ + DG+    T+V  A+    + ++S  +P+G ALL  + GD +   LP 
Sbjct: 88  VTLGKKISFKEVPDGDEETYTIVGSAESDPLSGKISNDSPMGKALLDHKTGDKVEIPLPE 147

Query: 114 GVATHLEVLELE 125
             +  +E+L + 
Sbjct: 148 NHSVTVEILHVS 159


>UniRef50_A5V3E1 Transcription elongation factor greA n=13 Tax=Proteobacteria
           RepID=GREA_SPHWW
          Length = 158

 Score =  125 bits (316), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 50/133 (37%), Gaps = 10/133 (7%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHDV 53
            RP II    +A     L E   Y                +   L RAQ+  P  +  D 
Sbjct: 27  ERPLIIDAIEEARAHGDLSENAEYHAAKERQGQIEASIADIEDRLSRAQVIDPSMLSGDK 86

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           +   + V   +  D +     +V   +      ++S  +P+G AL+G +V D +   +P 
Sbjct: 87  IVFGATVTLLD-DDEKPVRYQIVGQTEADAKTGKISYNSPLGRALIGKKVDDEVEVTVPS 145

Query: 114 GVATHLEVLELEY 126
           G      V ++E+
Sbjct: 146 G-DRFYLVSKIEF 157


>UniRef50_Q1H0G6 GreA/GreB family elongation factor n=3 Tax=Proteobacteria
           RepID=Q1H0G6_METFK
          Length = 165

 Score =  125 bits (315), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 52/141 (36%), Gaps = 10/141 (7%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMPH- 51
           + RP ++ +   A       E   Y                L   +D A +  P +    
Sbjct: 26  VERPKVVSDVAWAASNGDRSENGDYIYGKKRLRQIDSRLRFLMKRMDIAVVVDPAQQQDL 85

Query: 52  DVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWEL 111
           + +   + V+  ++         +V   ++      +S ++P+  ALLG + GD I  E 
Sbjct: 86  EKIYFGAWVELYSIDKDSEHHYRIVGQDELDPGKGYISWISPLARALLGKQPGDVIRVET 145

Query: 112 PGGVATHLEVLELEYQPEAAG 132
           P G     E++++ Y P   G
Sbjct: 146 PAGEER-FEIVDVSYHPPGQG 165


>UniRef50_B2SQJ5 Regulator of nucleoside diphosphate kinase n=8 Tax=Xanthomonadaceae
           RepID=B2SQJ5_XANOP
          Length = 215

 Score =  125 bits (315), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 47/130 (36%), Positives = 73/130 (56%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFR 63
           P+ +++  D  R + LL+ P++   P A AL+ EL RA++  P+++  DVVTM+SR++  
Sbjct: 83  PSTLVSSHDLARREALLDSPSFNKHPAATALSDELGRARVLPPDQIRGDVVTMHSRIECE 142

Query: 64  NLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLE 123
           +   G       V+P +    + ++ V+APVG+AL GL VG  I W  P G    L    
Sbjct: 143 DQLHGGRHTLPPVHPHEADVQHGRICVLAPVGSALGGLSVGQRIDWRTPDGRDLRLRATA 202

Query: 124 LEYQPEAAGD 133
           +  QP AAGD
Sbjct: 203 VHDQPTAAGD 212


>UniRef50_A0AIU5 Transcription elongation factor greA n=99 Tax=Bacteria
           RepID=GREA_LISW6
          Length = 160

 Score =  125 bits (314), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 53/132 (40%), Gaps = 9/132 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHD 52
           + R  ++     A     L E   Y                +   +  AQ+    E  + 
Sbjct: 27  VKRKEVVERIKIARSFGDLSENSEYDSAKDEQAFVEGRITTIENMIRNAQIIDAAEAHNG 86

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
           +VT+ + V F  L DGE    T+V  A+      ++S  +P+   LLG + G+ +  + P
Sbjct: 87  LVTLGNTVTFIELPDGEEETYTIVGSAEADPFEGKISNDSPIAKGLLGHKEGEEVTIQTP 146

Query: 113 GGVATHLEVLEL 124
            G   ++++ ++
Sbjct: 147 AG-DMNVKIEKI 157


>UniRef50_Q97EB6 Transcription elongation factor greA n=6 Tax=Clostridiales
           RepID=GREA_CLOAB
          Length = 158

 Score =  125 bits (314), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 32/132 (24%), Positives = 55/132 (41%), Gaps = 9/132 (6%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHDV 53
            R  I      A     L E   Y                +   L  A +    E+ +DV
Sbjct: 28  KRKEITEKIKVALSFGDLSENSEYDEAKNDQAFVEGRIAQIENMLKNANVIDESELKNDV 87

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           V++ S+V  ++    E    ++V  A+      ++S  +PVG+AL+G +VGD I   +P 
Sbjct: 88  VSVGSKVMVKDYQFDEEIEFSIVGSAEADPIENKISNESPVGSALIGKKVGDEIEVNVPD 147

Query: 114 GVATHLEVLELE 125
           GV    ++L ++
Sbjct: 148 GVD-KYKILAIK 158


>UniRef50_A5F052 Regulator of nucleoside diphosphate kinase n=31 Tax=Vibrio
           RepID=A5F052_VIBC3
          Length = 135

 Score =  124 bits (311), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 59/131 (45%), Positives = 82/131 (62%), Gaps = 2/131 (1%)

Query: 5   TIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRN 64
           TI+++  D +RI  L++       P  + L  ELDRA +  P EMP DVVTMNS V+F+ 
Sbjct: 6   TIVVSTRDMDRISQLMDNL-ATLSPELEKLEEELDRATVLEPAEMPEDVVTMNSTVRFKF 64

Query: 65  LSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
           L   EV  +TLVYP  +  S   +S+ APVG+ALLGL VG  + W +PGG    LE++++
Sbjct: 65  LGSDEVMEKTLVYPNDVKSSAD-VSIFAPVGSALLGLAVGQQLAWPMPGGTLKTLEIIDI 123

Query: 125 EYQPEAAGDYL 135
            YQPE AG++ 
Sbjct: 124 VYQPERAGEFH 134


>UniRef50_Q74EX3 Nucleoside diphosphate kinase regulator protein, putative n=1
           Tax=Geobacter sulfurreducens RepID=Q74EX3_GEOSL
          Length = 135

 Score =  124 bits (311), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 72/134 (53%), Gaps = 1/134 (0%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           M    I + + D  R++ +L+   +        L  EL  A +  P+++P +VVTMNSRV
Sbjct: 1   MDTRAIYVTEDDLSRLEEILDTIPFRDRKDLQKLEDELASAMIVDPKDVPPNVVTMNSRV 60

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
           K R+L   +    +LV+P     +  ++S+++P+G A+LG   GD++   +    A  + 
Sbjct: 61  KLRDLRADKEMTISLVFPNDANIAEGKISILSPIGTAILGFGAGDTLDLAVRS-FAKKIR 119

Query: 121 VLELEYQPEAAGDY 134
           + E+ YQP AAG +
Sbjct: 120 IEEVLYQPGAAGSH 133


>UniRef50_D1B0C0 Transcription elongation factor n=4 Tax=Campylobacteraceae
           RepID=D1B0C0_SULD5
          Length = 167

 Score =  123 bits (310), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 47/132 (35%), Gaps = 9/132 (6%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHDVV 54
           RP  +I    A     L E   Y                L+  + R+Q+  P    HD V
Sbjct: 27  RPETVIELDIARSHGDLKENAEYHAAKEKLAFIDSRIAELSDLVSRSQVIDPSTYEHDKV 86

Query: 55  TMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGG 114
              S +   NL   E    ++V   +       +S  +P+   L+G  V + +  +LP G
Sbjct: 87  RFGSTITLENLETNEEVTYSIVGSTESNPDLGLISYHSPLSKQLMGRCVDEEVMIKLPVG 146

Query: 115 VATHLEVLELEY 126
                 +L + Y
Sbjct: 147 T-QEYAILNITY 157


>UniRef50_A5VGM9 GreA/GreB family elongation factor n=1 Tax=Sphingomonas wittichii
           RW1 RepID=A5VGM9_SPHWW
          Length = 137

 Score =  123 bits (310), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 42/130 (32%), Positives = 67/130 (51%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
            RP I + D +A+ +  L    A     ++  L  EL RA +   + +P D+VTM+S V+
Sbjct: 8   RRPPIHMIDSEADILADLATSAATRLPQVSQLLLEELGRATIHKADRIPGDIVTMHSVVQ 67

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           F + + G+     LVYP     +  ++S++ PVGA L+GLR G SI W    G    L +
Sbjct: 68  FTDAASGKEHRYQLVYPKDADIAEGRISILTPVGAGLIGLRAGQSILWPDRDGHERLLTI 127

Query: 122 LELEYQPEAA 131
            ++  +  AA
Sbjct: 128 AKVSRESLAA 137


>UniRef50_Q8ZJH2 Transcription elongation factor greB n=165 Tax=Proteobacteria
           RepID=GREB_YERPE
          Length = 171

 Score =  123 bits (310), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 32/135 (23%), Positives = 56/135 (41%), Gaps = 10/135 (7%)

Query: 2   SRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMPHDV 53
            RP +     +A  +    E   Y                L   L+  ++  P+      
Sbjct: 26  ERPVVTQAVSEAAAMGDRSENAEYIYGKKRLREIDRRVRFLAKRLEVLKIVDPDPRQEGK 85

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           V   + V+  N  + E R+  LV P +   +   +S+ +PV  AL+G +V D +  + P 
Sbjct: 86  VFFGAWVRVENEQE-EQRIFRLVGPDEFDPAKKWISIDSPVARALIGKQVDDEVTVQTPN 144

Query: 114 GVATHLEVLELEYQP 128
           G AT+  +LE+ Y+P
Sbjct: 145 GEATYW-ILEIRYRP 158


>UniRef50_C9RKD0 Transcription elongation factor n=1 Tax=Fibrobacter succinogenes
           subsp. succinogenes S85 RepID=C9RKD0_FIBSS
          Length = 151

 Score =  123 bits (309), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 32/132 (24%), Positives = 56/132 (42%), Gaps = 11/132 (8%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIA---------DALNAELDRAQMCSPEEMPH 51
           + RP ++   +DA     L E   Y                 L  +L RAQ+ +  +   
Sbjct: 20  VERPRVLQELVDARAQGDLSENAEYHAAKERLASIDNIEMPKLQDQLARAQVIAF-DANS 78

Query: 52  DVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWEL 111
           D +   + +  +NL      V  LV P +    N ++S  +P+GAAL+G + GD++    
Sbjct: 79  DTIKFGATITAKNLKTKREIVYQLVSPEEADALNGKISFKSPIGAALMGKKRGDTVEVVT 138

Query: 112 PGGVATHLEVLE 123
           P G     E+++
Sbjct: 139 PKGKNQ-FEIID 149


>UniRef50_Q9HZY5 Transcription elongation factor greB n=13 Tax=Gammaproteobacteria
           RepID=GREB_PSEAE
          Length = 168

 Score =  122 bits (308), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 49/136 (36%), Gaps = 10/136 (7%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMPHD 52
           + RP +     +A  +    E   Y                L   L+  ++        +
Sbjct: 33  VRRPQVTQAVSEAAALGDRSENAEYIYGKKMLREIDSRVRFLRKRLENLKVVGERPADPN 92

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V   + V   +   GE     +V P ++   N Q+S+ +P+  AL+G  +   +    P
Sbjct: 93  RVYFGAWVTLEDED-GEQARYRIVGPDELDLRNNQISIDSPLARALVGKELDAEVLVRTP 151

Query: 113 GGVATHLEVLELEYQP 128
            G      V+E+EY P
Sbjct: 152 AGEKLWF-VVEIEYPP 166


>UniRef50_C0N448 Putative uncharacterized protein n=1 Tax=Methylophaga thiooxidans
           DMS010 RepID=C0N448_9GAMM
          Length = 137

 Score =  122 bits (308), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 41/135 (30%), Positives = 68/135 (50%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           + +P I +  LD  R++ L+        P+  +L  EL+RA++    ++P D+V+MNS V
Sbjct: 2   IHQPDIYVASLDLIRLEDLINTLWNKHSPVRLSLEDELERAKIIDSFQLPDDIVSMNSTV 61

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
           +            TLVYP  M    + LS+++P+G ALLG++ G+  +W    G      
Sbjct: 62  ELWVTKSDFPVYMTLVYPYGMKKDGSTLSILSPIGTALLGIKQGEEFYWPGRDGRNIKAR 121

Query: 121 VLELEYQPEAAGDYL 135
           +  + YQPE    Y 
Sbjct: 122 LENILYQPERERHYN 136


>UniRef50_D1SYS0 GreA/GreB family elongation factor n=1 Tax=Acidovorax avenae subsp.
           avenae ATCC 19860 RepID=D1SYS0_9BURK
          Length = 139

 Score =  122 bits (308), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 50/138 (36%), Positives = 69/138 (50%), Gaps = 9/138 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           +  P  ++ DLD  R+  L  +           L   L  A +     +  DVVTMNSRV
Sbjct: 5   LPHPERVLTDLDFARLSKLAARQLPPAS-----LADLLATADVTGSRAVDADVVTMNSRV 59

Query: 61  KFR----NLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVA 116
           +      + +DG  +V TL YP     +  ++SV++PVG +LLGLRVGD   W  P G  
Sbjct: 60  ELEGSGTDGADGARQVLTLCYPQDADAAAGRVSVLSPVGCSLLGLRVGDVAAWRTPQGED 119

Query: 117 THLEVLELEYQPEAAGDY 134
               V  + +QPEAAGDY
Sbjct: 120 CRATVAAILHQPEAAGDY 137


>UniRef50_UPI00016C498C transcription elongation factor greA n=1 Tax=Gemmata obscuriglobus
           UQM 2246 RepID=UPI00016C498C
          Length = 161

 Score =  122 bits (307), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 30/129 (23%), Positives = 52/129 (40%), Gaps = 9/129 (6%)

Query: 5   TIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHDVVTM 56
            I      A  +  L E   Y              DAL+  L RA +     +P D V  
Sbjct: 30  EITKRVAAARDLGDLSENAEYHAAREDQGILQARIDALSDRLSRAVIVDTSNLPKDTVAF 89

Query: 57  NSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVA 116
            S+V+  ++   E     LV P +      ++   +P+G  L+G + GD++  ++P G  
Sbjct: 90  GSKVRVLDVDVDEEETFELVSPGQENPDKGRILTGSPIGQGLIGRKKGDTVEIQVPSGTI 149

Query: 117 THLEVLELE 125
              ++LE+ 
Sbjct: 150 -KFKILEIS 157


>UniRef50_A6GQE5 Nucleoside diphosphate kinase regulator n=1 Tax=Limnobacter sp.
           MED105 RepID=A6GQE5_9BURK
          Length = 122

 Score =  122 bits (307), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 48/128 (37%), Positives = 64/128 (50%), Gaps = 7/128 (5%)

Query: 8   INDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSD 67
           +N+LD  RI  L         P    LNA LD A+   P+++P DVVTMNS         
Sbjct: 1   MNELDLARISKL-------NAPFPPELNAALDNAEFIKPQDIPADVVTMNSLFTIVETES 53

Query: 68  GEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQ 127
           G      L YP+    +   +SV++PVGA+LLG + G    W  P G      V E+ +Q
Sbjct: 54  GSTNKLMLCYPSDAEPAKGYISVLSPVGASLLGRKAGTVAQWATPNGEQHFAVVKEILFQ 113

Query: 128 PEAAGDYL 135
           PEA+GDY 
Sbjct: 114 PEASGDYT 121


>UniRef50_D0J9T5 Transcription elongation factor n=55 Tax=Bacteria
           RepID=D0J9T5_BLASP
          Length = 162

 Score =  122 bits (307), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 33/134 (24%), Positives = 61/134 (45%), Gaps = 8/134 (5%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADA--------LNAELDRAQMCSPEEMPHD 52
           + RP I +   +A     L E   Y  +  A          L  +L  A++    ++   
Sbjct: 27  IERPKISMQIAEARDKGDLSENAEYDAIKEAQEFLEMNIAKLKKKLSNARIIDGSQINRT 86

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V++ S V+ +NL+ G  ++ TLV   +    + ++S+  P+   LLG +VG   H +LP
Sbjct: 87  RVSILSTVRVKNLTYGGEQIYTLVPEGEADLKSGKISINTPISTGLLGKQVGQIAHIKLP 146

Query: 113 GGVATHLEVLELEY 126
             +    E+LE+ +
Sbjct: 147 NKMILDYEILEIAF 160


>UniRef50_C7GYY1 Transcription elongation factor n=1 Tax=Eubacterium saphenum ATCC
           49989 RepID=C7GYY1_9FIRM
          Length = 158

 Score =  122 bits (306), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 51/133 (38%), Gaps = 8/133 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHD 52
           + R  +     +A     L E   Y                L   L+  ++        D
Sbjct: 25  VRRKEVADRIKEATAYGDLSENSEYDAAKNEQAELEERISVLEDMLNNYEIIDSNAAKGD 84

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
           VV +   V  +N++  +     +V  A+    N  +S  +P+G  LL  +VG+++  ++P
Sbjct: 85  VVDLGLNVHLKNITKKKEETYRIVGSAEADPFNNLISNESPIGKGLLKHKVGETVSIDIP 144

Query: 113 GGVATHLEVLELE 125
            G     ++L++ 
Sbjct: 145 SGKTVKYKILKIS 157


>UniRef50_A5CVW9 Transcription elongation factor greA n=4 Tax=Gammaproteobacteria
           RepID=GREA_VESOH
          Length = 159

 Score =  122 bits (306), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 51/135 (37%), Gaps = 10/135 (7%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHD 52
           +SRP II +   A     L E   Y                +  +L R Q+    ++  D
Sbjct: 24  VSRPRIIEDIRIARAHGDLKENAEYHAAKEEQSFVEGRIKEIELKLSRMQIIDVTKLSQD 83

Query: 53  -VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWEL 111
                 + +   N  D       +V   +   S  ++S  +P+ +AL+G   GD +  + 
Sbjct: 84  GRCVFGTTITLMNSVDNSEITYQIVGEDEADISLDKISCHSPIASALMGNEEGDKVIVKA 143

Query: 112 PGGVATHLEVLELEY 126
           P G     ++L +EY
Sbjct: 144 PKGDIV-YKILSVEY 157


>UniRef50_Q2LR03 Transcription elongation factor greA n=1 Tax=Syntrophus
           aciditrophicus SB RepID=GREA_SYNAS
          Length = 161

 Score =  121 bits (305), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 31/133 (23%), Positives = 51/133 (38%), Gaps = 9/133 (6%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHDVVT 55
           P  I +   A     L E   Y                L   L  + +   + +  D + 
Sbjct: 27  PANIKDIEIARAHGDLSENAEYTAAKEKQSFLHGKLQELENNLALSNVIDLKMLSDDRIV 86

Query: 56  MNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGV 115
             + V     S G+     LV P +   S  ++SV +P+G AL+G  +GD +    PGG 
Sbjct: 87  FGATVIIEEASTGKQTNYQLVGPFESNISENKISVTSPIGKALIGKSIGDEVKVHTPGG- 145

Query: 116 ATHLEVLELEYQP 128
             + EV+++   P
Sbjct: 146 IRNFEVVDIYINP 158


>UniRef50_A9WK05 Transcription elongation factor greA n=6 Tax=Chloroflexi (class)
           RepID=GREA_CHLAA
          Length = 157

 Score =  121 bits (305), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 31/133 (23%), Positives = 52/133 (39%), Gaps = 9/133 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHD 52
           + R  I      A+ +  + E   Y                L   L RA++   ++  + 
Sbjct: 26  VERKQIAERIAAAKELGDISESGEYEDAKKAQALLEGRIRELKHLLSRAEVIDEDQASNG 85

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V + S V  R   DG     T+V  A+      ++S  +P+GAALLG R  + +    P
Sbjct: 86  EVRVGSSVTVRFEDDGTEETWTIVGSAEANPRQGRISNESPLGAALLGKRARNKVTVHTP 145

Query: 113 GGVATHLEVLELE 125
            G    L +L++ 
Sbjct: 146 SG-VMKLTILKVR 157


>UniRef50_A6C278 Nucleoside diphosphate kinase regulator protein, putative n=1
           Tax=Planctomyces maris DSM 8797 RepID=A6C278_9PLAN
          Length = 137

 Score =  121 bits (305), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 49/135 (36%), Positives = 71/135 (52%), Gaps = 4/135 (2%)

Query: 1   MSRPTIIINDLDAERIDILLEQ---PAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMN 57
           M +  I I   D +R+  LL      A    P    L+AEL  A +   EE+P D+VTMN
Sbjct: 1   MPQQKIFITKTDYQRLQNLLLSDFTQAIGNKPYLSGLHAELAVAHIVESEEIPADIVTMN 60

Query: 58  SRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVAT 117
           S V+ R+L   E+   TLVYP        +LS++ P+G A+LG R+GD +      G + 
Sbjct: 61  STVRLRDLETDELETYTLVYPQDANIKEGKLSILTPIGTAILGYRIGDQLRSRALAGGS- 119

Query: 118 HLEVLELEYQPEAAG 132
            + V E+ +QPE +G
Sbjct: 120 KIRVEEILFQPERSG 134


>UniRef50_D1B632 Transcription elongation factor n=4 Tax=Synergistaceae
           RepID=D1B632_THEAS
          Length = 164

 Score =  121 bits (305), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 50/131 (38%), Gaps = 9/131 (6%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLPIADA--------LNAELDRAQMCSPEEMPHDVV 54
           R  I     +A     L E   Y                L  +L +A++    ++    V
Sbjct: 33  RSEIASKLEEARAFGDLSENAEYHAAKEEQEKLESRIMWLEYQLSKAKVVESSDIDTSTV 92

Query: 55  TMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGG 114
           ++ + V+ R+L  G      LV   +      ++S  +PVG A++G   G+ +   +P G
Sbjct: 93  SLGATVQLRDLDTGNTYTYVLVGSEEADPKANRISAQSPVGKAIIGRAEGEEVIVRVPKG 152

Query: 115 VATHLEVLELE 125
              HL +  + 
Sbjct: 153 T-RHLRIERIS 162


>UniRef50_Q096W9 Transcription elongation factor GreB n=1 Tax=Stigmatella aurantiaca
           DW4/3-1 RepID=Q096W9_STIAU
          Length = 144

 Score =  121 bits (304), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 30/135 (22%), Positives = 47/135 (34%), Gaps = 11/135 (8%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEE-MPH 51
           + RP +      A       E   Y                L   LD A + +P E    
Sbjct: 11  VERPKVTAEVSAAAAQGDRSENAEYIYGKKRLREIDRRIRFLQKRLDTATIVTPAEQTDQ 70

Query: 52  DVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWEL 111
             V   + V   +   G      +V   ++     ++SV +P+G ALL   VGDS+    
Sbjct: 71  GRVYFGATVTLEDED-GVQTTYQIVGSDEIDTQGGRISVESPIGKALLRKAVGDSVEVMR 129

Query: 112 PGGVATHLEVLELEY 126
           P G    L ++ + Y
Sbjct: 130 PRGEI-ELTIVAIAY 143


>UniRef50_C4XLU8 Transcription elongation factor greA n=11 Tax=Desulfovibrionales
           RepID=GREA_DESMR
          Length = 164

 Score =  121 bits (304), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 34/139 (24%), Positives = 62/139 (44%), Gaps = 10/139 (7%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHDVVT 55
           P +I+   +A     L E   Y              + + + + R  +     +  + V 
Sbjct: 26  PGVILAIKEAREEGDLRENAGYEAARERQGMLEARINYIESRMSRFNVIDLATLGGEQVI 85

Query: 56  MNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGV 115
             + V+  ++  G+V+  TL+ P +   S   +S+++PVG ALLG  VGD I  + P G 
Sbjct: 86  FGATVEIEDVDTGDVKKYTLLGPDEAEPSKGSISLLSPVGLALLGKFVGDEIVVDAPRGK 145

Query: 116 ATHLEVLELEYQ-PEAAGD 133
             + E++ + +  P AA D
Sbjct: 146 I-NYEIVSIAFHGPIAAAD 163


>UniRef50_Q88DU7 Transcription elongation factor greA n=83 Tax=Proteobacteria
           RepID=GREA_PSEPK
          Length = 160

 Score =  121 bits (304), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 47/134 (35%), Gaps = 10/134 (7%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMP-HD 52
            RP +     +A  +  L E   Y                +   L  + +     +P   
Sbjct: 27  ERPRLSQAIGEARELGDLKENAEYHAAREEQGMVEARIRDIEGRLQNSVVIDVTTIPHTG 86

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V   + V   N    E     +V   +      +LS  AP+  A++G   GD++  + P
Sbjct: 87  KVIFGTTVVLANTETDEEVTYQIVGEDEADVKQGKLSSGAPIARAIIGKEEGDTVVVKTP 146

Query: 113 GGVATHLEVLELEY 126
            G     E++E+++
Sbjct: 147 SGT-VEYEIVEVKH 159


>UniRef50_C9RNS9 GreA/GreB family elongation factor n=1 Tax=Fibrobacter succinogenes
           subsp. succinogenes S85 RepID=C9RNS9_FIBSS
          Length = 169

 Score =  120 bits (303), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 29/134 (21%), Positives = 53/134 (39%), Gaps = 9/134 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMPHD 52
           + RP +I     A       E  AY                L+  LD AQ+         
Sbjct: 37  VERPAMINQVQAAAAEGDRSENAAYTYGRMRVREIDRRLRELDRILDGAQIVENAATKDG 96

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            +   + VK  +      ++ ++V   ++     ++S+ +P+G AL G + GD++  + P
Sbjct: 97  SIRFGATVKMIDKKTKREKIYSIVGDKEIDPLQGRISMKSPIGEALQGKKAGDTVEVQAP 156

Query: 113 GGVATHLEVLELEY 126
            G     E+LE+ Y
Sbjct: 157 RGKIV-YEILEVNY 169


>UniRef50_Q817Z6 Transcription elongation factor greA n=141 Tax=cellular organisms
           RepID=GREA_BACCR
          Length = 158

 Score =  120 bits (302), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 53/133 (39%), Gaps = 9/133 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHD 52
           + R  ++     A     L E   Y                L   +  A +         
Sbjct: 27  VRRKEVVERIKIARSFGDLSENSEYDAAKDEQAFVEGRITQLENMIRNAVIIKDTGEVST 86

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
           VVT+   V F+ L +G+    T+V  A+      ++S  +P+  +LLG ++G+ +  + P
Sbjct: 87  VVTLGKTVTFKELPNGDEEAYTIVGSAEADPFEGRISNDSPIAKSLLGKQIGEKVTIQTP 146

Query: 113 GGVATHLEVLELE 125
           GG    +E++ ++
Sbjct: 147 GGE-MQVEIVSVK 158


>UniRef50_A0LK20 Transcription elongation factor greA n=1 Tax=Syntrophobacter
           fumaroxidans MPOB RepID=GREA_SYNFM
          Length = 156

 Score =  120 bits (302), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 31/132 (23%), Positives = 53/132 (40%), Gaps = 9/132 (6%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHDV 53
            RP +I    +A     + E   Y                L  ++   ++  P +  +  
Sbjct: 25  ERPMVIRAIEEARSHGDISENAEYEAAKEKQAMIEGRIQDLCQKMGECEIVEPSDNDNGR 84

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
               S V   +   GEV    LV P +    +  +SV++P+G AL+G   G+ I  + P 
Sbjct: 85  AIFGSTVVVEDTETGEVTSYRLVGPYEADVQSGTISVVSPLGKALIGKEEGEEIRVQTPK 144

Query: 114 GVATHLEVLELE 125
           G   ++EVLE+ 
Sbjct: 145 G-VRNIEVLEIR 155


>UniRef50_A8SDG2 Transcription elongation factor n=2 Tax=Clostridiales
           RepID=A8SDG2_9FIRM
          Length = 161

 Score =  120 bits (302), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 30/134 (22%), Positives = 48/134 (35%), Gaps = 8/134 (5%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHD 52
           + R  +     +A     L E   Y                L   +  A +    E+  D
Sbjct: 25  VRRKELAEEIKEARSHGDLSENSEYDEAKNTQGLVENRITELEQTIKNAVIIDESELSVD 84

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V++ + V  R   + E     +V   +    N ++S  +PVG AL+G  VGD     LP
Sbjct: 85  NVSVGTHVTIRETGEDEAEEYDIVGRTEADAFNGKISDESPVGHALMGKAVGDKAEVLLP 144

Query: 113 GGVATHLEVLELEY 126
            G      VL + +
Sbjct: 145 TGQTVVYTVLAITH 158


>UniRef50_Q2Y7V5 GreA/GreB family elongation factor n=33 Tax=cellular organisms
           RepID=Q2Y7V5_NITMU
          Length = 213

 Score =  120 bits (302), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 32/137 (23%), Positives = 52/137 (37%), Gaps = 12/137 (8%)

Query: 2   SRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMPHD- 52
            RP +      A       E   Y                L   LD A++  P     D 
Sbjct: 53  ERPQVTATVSWAAANGDRSENADYIYGKKRLREIDRRIRFLTRRLDMAEIIDPSMPREDE 112

Query: 53  -VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWEL 111
             +   + V + N   GE ++ ++V   ++  +   +S ++P+   LL  R GD +    
Sbjct: 113 SRIFFGATVTYINEK-GEEKIVSIVGVNEIDTTRGYISWVSPLARTLLKAREGDVVTLHA 171

Query: 112 PGGVATHLEVLELEYQP 128
           PGG    LE+LE+ YQ 
Sbjct: 172 PGGTE-ELEILEVRYQA 187


>UniRef50_B1MX52 Transcription elongation factor greA n=11 Tax=Firmicutes
           RepID=GREA_LEUCK
          Length = 160

 Score =  120 bits (302), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 33/131 (25%), Positives = 53/131 (40%), Gaps = 8/131 (6%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLPIADA--------LNAELDRAQMCSPEEMPHDVV 54
           RP I      A     L E   Y       A        L   ++ A++  P     DVV
Sbjct: 29  RPEITNRIQIARSYGDLSENSEYQSAKDEQAFVEGRILTLKKMIENAEIIDPNATAADVV 88

Query: 55  TMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGG 114
           ++   V F+ L D E     +V   +      ++S  + +  ALL  +VGD +   LP G
Sbjct: 89  SLGKTVTFKELPDEEPETYAIVGSTESDPLAGKISNESAMAVALLDKKVGDKVSVPLPSG 148

Query: 115 VATHLEVLELE 125
            +  +E+L++E
Sbjct: 149 ESIDVEILKVE 159


>UniRef50_B3PF63 Regulator of nucleoside diphosphate kinase n=1 Tax=Cellvibrio
           japonicus Ueda107 RepID=B3PF63_CELJU
          Length = 180

 Score =  120 bits (301), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 44/121 (36%), Positives = 77/121 (63%), Gaps = 3/121 (2%)

Query: 5   TIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRN 64
           +++I++ D +R+  L+E       P A+AL+ E+ RA + +  ++P DVV M+S V F +
Sbjct: 60  SLVISNSDYQRLVQLIE---DNDSPAAEALDIEIGRATLVADAQLPADVVAMDSEVTFED 116

Query: 65  LSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
           L  GE +   LV+PA+      ++S+++PVG+AL+GLR+G SI W +P G    L+V+ +
Sbjct: 117 LDSGEQKTIQLVFPAQANVDQLKISILSPVGSALIGLRIGSSIDWPVPQGKVRRLKVIAV 176

Query: 125 E 125
           +
Sbjct: 177 K 177


>UniRef50_A7HDS3 Transcription elongation factor GreB n=3 Tax=Myxococcales
           RepID=A7HDS3_ANADF
          Length = 169

 Score =  120 bits (301), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 34/137 (24%), Positives = 55/137 (40%), Gaps = 10/137 (7%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMPHD 52
           + RP I+     A  +    E   Y                L+  +D   +  P   PH 
Sbjct: 32  VDRPKIVAEVEAAAALGDRSENAEYVYGKKKLRELDRRLRFLSERMDALTVVDPRPHPHG 91

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
                + V   +  +GE R   LV P +   +   +SV AP+G ALLG + GD++ +  P
Sbjct: 92  RAFFGAWVTIED-DEGEARTFRLVGPDEFDVAAGLISVEAPLGRALLGKQEGDTVLFLRP 150

Query: 113 GGVATHLEVLELEYQPE 129
            G A  L ++ + + P 
Sbjct: 151 AGEA-ELTIMAVRWSPP 166


>UniRef50_D0J5N8 Kelongation factor GreB n=4 Tax=Proteobacteria RepID=D0J5N8_COMTE
          Length = 231

 Score =  119 bits (300), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 34/135 (25%), Positives = 52/135 (38%), Gaps = 11/135 (8%)

Query: 2   SRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPE-EMPHD 52
            RP I+     A       E   Y                L   L+ A++  P      D
Sbjct: 93  ERPKIVEIVHWAASNGDRSENGDYLYGKKRLREIDRRIRFLTKRLEIAEVVDPAVHAGSD 152

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V   + V + +  +G  R  T++   +   +  Q+S +APV  ALL  RVGD +    P
Sbjct: 153 QVFFGATVSYVD-DEGVERTITIMGIDEADSAQNQVSWIAPVSRALLKARVGDEVALPTP 211

Query: 113 GGVATHLEVLELEYQ 127
            G    LE+L++ Y 
Sbjct: 212 AG-VRMLEILDVSYP 225


>UniRef50_UPI0001C3129D transcription elongation factor GreA n=1 Tax=Conexibacter woesei
           DSM 14684 RepID=UPI0001C3129D
          Length = 161

 Score =  119 bits (300), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 51/131 (38%), Gaps = 8/131 (6%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHDV 53
            R  +     +A     + E   Y                L  +L  A +     +  DV
Sbjct: 26  KRREVAARIKEAREFGDISENAEYDDAKNEQAMLESKIAQLEEKLRAATVIDSRSVGTDV 85

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           V + S V+  +   G+     +V  A+   +  +LS  +PVG AL+G + G++   +LP 
Sbjct: 86  VGIGSSVQVADSQSGKSDTYVIVGSAEANPAERKLSNESPVGKALIGRKAGETATVQLPN 145

Query: 114 GVATHLEVLEL 124
           G    L + ++
Sbjct: 146 GKQRELRITKI 156


>UniRef50_A5V983 GreA/GreB family elongation factor n=1 Tax=Sphingomonas wittichii
           RW1 RepID=A5V983_SPHWW
          Length = 166

 Score =  119 bits (299), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 43/130 (33%), Positives = 66/130 (50%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
            RP I + D +AE +  +          +++ L  E+DRA +     +P DVVTM+S V+
Sbjct: 37  RRPAIHMIDSEAETLANMAVAAEERIPQVSELLLEEIDRATLYKAARIPADVVTMHSHVE 96

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           F + ++G  R   LVYP        ++S++  VGA L+GLR G SI W    G    L +
Sbjct: 97  FVDEANGTSRTVQLVYPKDADIDAGRVSILTLVGAGLIGLREGQSILWPGRDGHRRLLTI 156

Query: 122 LELEYQPEAA 131
             +  + EAA
Sbjct: 157 TRVSREAEAA 166


>UniRef50_A1TUC9 GreA/GreB family elongation factor n=4 Tax=Burkholderiales
           RepID=A1TUC9_ACIAC
          Length = 136

 Score =  119 bits (299), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 47/128 (36%), Positives = 68/128 (53%), Gaps = 5/128 (3%)

Query: 7   IINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLS 66
           ++ DLD  R+  L  Q           L   L+ A + S   +  DVVTM SRV+  + +
Sbjct: 12  VLTDLDFARLSRLASQQPAPPS-----LADLLENADVTSSRTVEADVVTMYSRVELVDTA 66

Query: 67  DGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
            G  +V T+ YP     +   +SV++PVG++LLGLRVG +  W  P G A    V  +++
Sbjct: 67  TGARQVLTICYPRDADLAAGFVSVLSPVGSSLLGLRVGQTARWCTPRGEACEATVAGIQH 126

Query: 127 QPEAAGDY 134
           QPEA GDY
Sbjct: 127 QPEAEGDY 134


>UniRef50_Q0BR49 Transcription elongation factor greB n=4 Tax=cellular organisms
           RepID=Q0BR49_GRABC
          Length = 169

 Score =  119 bits (298), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 33/138 (23%), Positives = 55/138 (39%), Gaps = 11/138 (7%)

Query: 2   SRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMP-HD 52
            RP I+     A       E   Y                L   L+ A +  P   P  D
Sbjct: 34  ERPKIVEIVSWAAGNGDRSENGDYLYGKKRLREIDRRVRFLTKRLENAVVIDPATQPHKD 93

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            +   + V + N +D E    T+V   +   +  ++S+++PV  ALLG   GD +    P
Sbjct: 94  RIYFGATVTYINAAD-ETVQVTIVGADEADMALGRISLLSPVAKALLGASKGDEVTVITP 152

Query: 113 GGVATHLEVLELEYQPEA 130
                 L++L+++Y+P A
Sbjct: 153 V-KTEILDILDVDYRPLA 169


>UniRef50_D2T9B8 Transcription elongation factor greB n=3 Tax=Erwinia
           RepID=D2T9B8_ERWPY
          Length = 187

 Score =  119 bits (298), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 48/133 (36%), Gaps = 10/133 (7%)

Query: 2   SRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMPHDV 53
            RP +      A  +    E   Y                L   L++ ++          
Sbjct: 53  ERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYLTKCLEQLRIVDYSPQQDGK 112

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           V   + V+  N  DG+++   +V   ++   N  +S+ +P+  ALL   VGD+     P 
Sbjct: 113 VFFGAWVEVEN-DDGDIKRFRIVGYDEIFGRNDYISIDSPMARALLKKEVGDAATVFTPA 171

Query: 114 GVATHLEVLELEY 126
           G A    + ++ Y
Sbjct: 172 GEALWY-INDISY 183


>UniRef50_A5FRA2 Transcription elongation factor n=3 Tax=Dehalococcoides
           RepID=A5FRA2_DEHSB
          Length = 266

 Score =  119 bits (298), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 31/135 (22%), Positives = 57/135 (42%), Gaps = 9/135 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHD 52
           + R  +I     A     + E   Y                +  EL  A++    +    
Sbjct: 133 VKRIAVIEEMRLAALDKDMRENAPYHAAKEQRGQIEGRIKEIEHELKHAEVSEYTDNNTS 192

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V M + VK R+L +GE  + TLV P ++     ++S  +P+G AL     GD+I  E+P
Sbjct: 193 KVNMGNTVKLRDLKNGEQCIYTLVSPKEIEPLKGRISASSPIGKALFNRSKGDNIEIEVP 252

Query: 113 GGVATHLEVLELEYQ 127
            G   ++ + ++ ++
Sbjct: 253 SGTLQYV-IEDISFK 266


>UniRef50_Q2GD99 Transcription elongation factor greA n=2 Tax=Neorickettsia
           RepID=GREA_NEOSM
          Length = 159

 Score =  119 bits (298), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 53/134 (39%), Gaps = 9/134 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHD 52
           + +P+++     A  +  L E   Y                L   L  A++    +   +
Sbjct: 24  VVKPSVVAAVAQARELGDLSENAEYHEARKEQSFVEGKIRELQLCLSEAEVIDVSQFTGE 83

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V   + V   N+    V +  +V   +      ++SV +P+G A++   VG+ +  +LP
Sbjct: 84  RVKFGASVTLENMESKSVLIYQIVGNLESDIKEGKISVSSPIGKAVMNKEVGEIVEIDLP 143

Query: 113 GGVATHLEVLELEY 126
            G     ++L +E+
Sbjct: 144 SGK-KTYKILGVEF 156


>UniRef50_Q3SU57 GreA/GreB family elongation factor n=9 Tax=Bradyrhizobiaceae
           RepID=Q3SU57_NITWN
          Length = 151

 Score =  118 bits (296), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 43/139 (30%), Positives = 66/139 (47%), Gaps = 11/139 (7%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPE----------EMPHDV 53
           P I I+  D +R+  L E         A+ L  E+DRA++   +              ++
Sbjct: 11  PAIAISAHDIDRLRHLAEAAIEKYPATAEFLAREIDRAEIIPADGSLLDDTRDQRWKVNL 70

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           VTM S V F +   G+ R  TLVYP        ++S+++P+GAAL+GL  G SI ++ P 
Sbjct: 71  VTMQSEVTFIDDVSGQKRRVTLVYPEDADVDAGKISILSPIGAALIGLSAGQSIEFQTPS 130

Query: 114 GVATHLEVLEL-EYQPEAA 131
           G    L V+ +  Y P   
Sbjct: 131 GGWRSLTVIAVWSYWPRPE 149


>UniRef50_B8IFL5 GreA/GreB family elongation factor n=8 Tax=Methylobacterium
           RepID=B8IFL5_METNO
          Length = 141

 Score =  118 bits (296), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 44/123 (35%), Positives = 65/123 (52%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKF 62
           +P I +   D ER+  L          +A  L  ELDRAQ+ +        V M  +V+F
Sbjct: 14  KPRIKMTVEDHERLSALAAAAQDRMPDVASCLADELDRAQIVAGRGRLPPFVRMGCQVEF 73

Query: 63  RNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVL 122
           R+ + G V++ TLVYP +      ++SV+ P+GAAL+GL  G SI WE   G+   L VL
Sbjct: 74  RDDTTGRVQIVTLVYPGEANIEQGKISVLTPIGAALIGLSTGQSITWETRSGLTKSLTVL 133

Query: 123 ELE 125
           ++ 
Sbjct: 134 DVR 136


>UniRef50_Q1H282 GreA/GreB family elongation factor n=2 Tax=Proteobacteria
           RepID=Q1H282_METFK
          Length = 165

 Score =  117 bits (294), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 51/125 (40%), Gaps = 7/125 (5%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
            R  + +   D      L              L A L+ A +  P   P D V   + V+
Sbjct: 48  ERQPLTMRKDDPAVQQRLA-----MIDRDLRYLQARLESAIVVDPATQPTDTVLFGATVE 102

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
             +  +G      +V   +   +  ++S ++P+  AL+G ++GDS+ W  P G    LE+
Sbjct: 103 VED-ENGNSHTFMIVGEDEADIATNRVSWVSPLAKALIGQKIGDSVTWHRPAG-NLELEI 160

Query: 122 LELEY 126
           + + Y
Sbjct: 161 IAIHY 165


>UniRef50_A6W1U9 Transcription elongation factor GreB n=17 Tax=Gammaproteobacteria
           RepID=A6W1U9_MARMS
          Length = 196

 Score =  117 bits (294), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 46/133 (34%), Gaps = 10/133 (7%)

Query: 2   SRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMPHDV 53
            RP +     +A       E   Y                L   L+   +        + 
Sbjct: 61  KRPAVTETVREAAAQGDRSENAEYIYGKKQLREIDRRVRYLEKRLEVCTVVDRFPSDQER 120

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           V   + V   +   G ++   +V P ++   ++ +S+ +PV  ALL  + GD +   L G
Sbjct: 121 VFFGAWVTLED-EAGNLKEYRIVGPDELDHHSSYISIDSPVARALLKKQEGDEVVIRLAG 179

Query: 114 GVATHLEVLELEY 126
           G      +  +EY
Sbjct: 180 GE-KTYIIDAVEY 191


>UniRef50_Q03RN4 Transcription elongation factor n=1 Tax=Lactobacillus brevis ATCC
           367 RepID=Q03RN4_LACBA
          Length = 132

 Score =  117 bits (294), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 31/132 (23%), Positives = 56/132 (42%), Gaps = 10/132 (7%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHD 52
           + RP +I     A     L E   Y                +   L  AQ+   ++   D
Sbjct: 2   VQRPKVIDRIKIARSYGDLSENSEYESAKDEQSMLETRISTVERMLQYAQIIDNDDTDKD 61

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            +T+  +V F+   D E    T+V  A+    + ++S  +P+   LLG RVG+++ +  P
Sbjct: 62  EITVGKKVTFQ-EDDDEPEEYTIVGAAEADPMSGKISNDSPIAKGLLGHRVGETVTFPTP 120

Query: 113 GGVATHLEVLEL 124
           GG    ++V+ +
Sbjct: 121 GG-DMTVKVIAV 131


>UniRef50_C6VSR5 GreA/GreB family elongation factor n=2 Tax=Sphingobacteriales
           RepID=C6VSR5_DYAFD
          Length = 134

 Score =  117 bits (294), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 31/125 (24%), Positives = 62/125 (49%), Gaps = 1/125 (0%)

Query: 5   TIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRN 64
            +I+   D + +    +           +L  EL+RA +    E+P   + +NS VK R 
Sbjct: 7   PVILGKDDFKLLKQFAQTFPDNNSSETMSLAYELNRAVVVEDNELPAGSIRLNSYVKVRE 66

Query: 65  LSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
            +  +    ++V P     +  ++S++ P+GAAL+GL  G+++ W++P G     ++L++
Sbjct: 67  TTTNKEMAFSIVMPKDADIAKQRISILTPMGAALIGLCKGETVEWKMPAG-IRRFKILDV 125

Query: 125 EYQPE 129
            Y  E
Sbjct: 126 WYDQE 130


>UniRef50_C9KJ19 Transcription elongation factor n=1 Tax=Mitsuokella multacida DSM
           20544 RepID=C9KJ19_9FIRM
          Length = 156

 Score =  117 bits (293), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 30/133 (22%), Positives = 51/133 (38%), Gaps = 11/133 (8%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHD 52
           + R  I      A  +  L E   Y                L A++  + +        D
Sbjct: 26  VKRIEIAQRLKAAIALGDLSENSEYDDAKNEQAFLEGEIQDLTAKIRNSHIIKAGA--GD 83

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
           VV M S+V  +++  G+     LV   +      ++S  +P+G ALLG + G  I    P
Sbjct: 84  VVQMGSKVTVKDIEFGDEETFMLVGSTEADPDEGKISNESPLGQALLGQKSGSVIDVHAP 143

Query: 113 GGVATHLEVLELE 125
            G     E+L+++
Sbjct: 144 AG-IIKYEILDIK 155


>UniRef50_Q67JL1 Transcription elongation factor n=2 Tax=Clostridiales
           RepID=Q67JL1_SYMTH
          Length = 157

 Score =  117 bits (293), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 52/133 (39%), Gaps = 9/133 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHD 52
           + R  +      A     + E   Y                L   L  A++        +
Sbjct: 26  VKRMEVAERIKQAREYGDISENSEYEDAKNEQAFIEGRILVLEKMLRNARVIDEPVGQQE 85

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
           VV + S V  R+L  G+    T+V   +   ++ ++S  +PVG A++G RVG  +  + P
Sbjct: 86  VVVLGSTVVLRDLEYGDEHTYTIVGTTEADPAHNRISNESPVGRAIMGQRVGTVVAVDAP 145

Query: 113 GGVATHLEVLELE 125
            G     E++ ++
Sbjct: 146 DG-VFKYEIVAIK 157


>UniRef50_Q1QUF3 GreA/GreB family elongation factor n=1 Tax=Chromohalobacter
           salexigens DSM 3043 RepID=Q1QUF3_CHRSD
          Length = 178

 Score =  117 bits (293), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 29/138 (21%), Positives = 48/138 (34%), Gaps = 10/138 (7%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMPHD 52
           + RP +     +A  +    E   Y          +     L   LD  Q+         
Sbjct: 43  VKRPALSTKVGEAAALGDRSENADYTYNKKELNRVIARIRYLGKRLDELQVVDRLPADTS 102

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V   + V   +  DGE     +V   +       +SV AP+  A+LG  + + +    P
Sbjct: 103 RVYFGAYVTLED-DDGEEMTIRIVGHDETDTDKRWISVDAPLAQAMLGKGLDEDVTVNAP 161

Query: 113 GGVATHLEVLELEYQPEA 130
           GG      + ++ Y PEA
Sbjct: 162 GGDT-TYIITDIAYDPEA 178


>UniRef50_Q88KH5 Transcription elongation factor greB n=84 Tax=Gammaproteobacteria
           RepID=GREB_PSEPK
          Length = 162

 Score =  116 bits (292), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 46/134 (34%), Gaps = 10/134 (7%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMPHD 52
           + RP I      A  +    E   Y                L   L+  ++ +       
Sbjct: 24  VYRPEITQKVAWAASLGDRSENADYQYNKKLLREIDRRVRYLRKRLEDVKVVAYSPEQEG 83

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V   + V+  N  +GE     +V   ++   N  +S+ +P+  ALL    GD +    P
Sbjct: 84  KVFFGAWVEIEN-DEGETMKFRIVGYDEIYGRNDYISIDSPMARALLKKEEGDEVVVHTP 142

Query: 113 GGVATHLEVLELEY 126
            G AT   V  + Y
Sbjct: 143 TGEATWY-VSSIRY 155


>UniRef50_C4Z9L9 Transcription elongation factor n=3 Tax=Firmicutes
           RepID=C4Z9L9_EUBR3
          Length = 185

 Score =  116 bits (292), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 29/137 (21%), Positives = 55/137 (40%), Gaps = 9/137 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHD 52
           + R  +     +A     L E   Y              + +   L  A++   EE+  D
Sbjct: 49  VKRKEVSQKIKEAREQGDLSENAEYDAAKDEQRDIEARIEEIEKILKNAEVVVEEEVDLD 108

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            +++  +++  +    E     +V   +      ++S  +PVG ALLG +VGD++  E  
Sbjct: 109 KISIGCKIRILDCEFDEELEYKIVGSTEANSLKGKISNESPVGKALLGKKVGDTVTVETQ 168

Query: 113 GGVATHLEVLELEYQPE 129
            G     +VLE++   E
Sbjct: 169 VGE-LTYKVLEIQRAEE 184


>UniRef50_Q3ATA7 Transcription elongation factor greA n=13 Tax=Bacteria
           RepID=GREA_CHLCH
          Length = 160

 Score =  115 bits (290), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 10/136 (7%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHDV 53
           +R  ++    +A     L E   Y                L ++L  A +  P+++  D 
Sbjct: 26  TRKEVLEKIAEARAHGDLSENAEYDAAREEQSQIEARIGDLESKLSAATILDPKQIKTDK 85

Query: 54  VTMNSRVKFRNLSD-GEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
           V + + VK RNL +  E+   TLV   +      ++SV +PVG +L+G  VG  +   +P
Sbjct: 86  VYILTSVKLRNLDNPDEIIEYTLVSSEEADTDAGKISVRSPVGRSLIGKTVGAKVTIVVP 145

Query: 113 GGVATHLEVLELEYQP 128
            G   H E+LE+  +P
Sbjct: 146 KGE-LHYEILEIFVKP 160


>UniRef50_C6WYK0 GreA/GreB family elongation factor n=2 Tax=Methylophilaceae
           RepID=C6WYK0_METML
          Length = 125

 Score =  115 bits (290), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 42/125 (33%), Positives = 66/125 (52%), Gaps = 9/125 (7%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           M    +I++D D  R+ +L            + L  EL RA +   +++P DVV +NSRV
Sbjct: 2   MEIDKLILSDQDYARLSMLAND---------ELLGDELSRAIVVPADQVPADVVRINSRV 52

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
            + + S G  R   LV+P        ++SV++PVG+ALLGL+ G  I W  P G +  L+
Sbjct: 53  IYLDESSGLSREVELVFPEGADLKFGKISVLSPVGSALLGLKEGQVIDWPFPHGQSRRLK 112

Query: 121 VLELE 125
           V+ + 
Sbjct: 113 VVSVA 117


>UniRef50_Q30T56 Transcription elongation factor n=3 Tax=Campylobacterales
           RepID=Q30T56_SULDN
          Length = 174

 Score =  115 bits (290), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 31/135 (22%), Positives = 54/135 (40%), Gaps = 9/135 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMPHD 52
           + +P      L A  +    E   Y                LNA + +A +  P  + H 
Sbjct: 23  VEKPKTAQEKLVAAALGDRSENADYQAAKEKLRHIDKRLFYLNAMIQKAHIIDPSTLLHT 82

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V+  S V+  +L   +  V T+    +    N  +S+ +P+   +LG RV D    +LP
Sbjct: 83  KVSFGSSVRILDLESDKEEVYTICGVLESEPENGLISIHSPLAQVMLGKRVSDEFKIQLP 142

Query: 113 GGVATHLEVLELEYQ 127
             +    E+LE+ Y+
Sbjct: 143 L-MKKEYEILEIYYK 156


>UniRef50_Q2Z001 Transcription elongation factor n=1 Tax=uncultured candidate
           division OP8 bacterium RepID=Q2Z001_9BACT
          Length = 156

 Score =  115 bits (289), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 27/134 (20%), Positives = 51/134 (38%), Gaps = 9/134 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHD 52
           + RP  +    +A     L E   +                L   +  A +  P ++  +
Sbjct: 24  VDRPANVKAIEEARGHGDLRENADFKCAKDEQAMIVGRIAYLQGRISHAAVIDPSKLSGN 83

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V   +RV  +NL  GE  V  LV   +       +S+ +P+   L+   VG+     +P
Sbjct: 84  RVVFGARVFLKNLDTGEPIVYRLVGEDEADIEQGSISITSPLARGLIRREVGEQAKIAVP 143

Query: 113 GGVATHLEVLELEY 126
            G     E++++E+
Sbjct: 144 SG-IKSFEIVKIEF 156


>UniRef50_Q98Q16 Transcription elongation factor greA n=3 Tax=Mycoplasma
           RepID=GREA_MYCPU
          Length = 157

 Score =  115 bits (288), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 48/132 (36%), Gaps = 12/132 (9%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHD 52
           + RP +I+   +A +   L E   Y                L   L  A          D
Sbjct: 27  VERPAVILEIKEARQQGDLSENAEYDAAREKQGQIEDRITELENILSNAISIQESH--SD 84

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            + + S V+  N S G+ R   +V       +  ++S  +P+  +++G   GD +  + P
Sbjct: 85  KIGLGSVVRILNQSTGKERTFKIVGSFDTDPTQNKISYESPLAKSIIGFSKGDVVEIDAP 144

Query: 113 GGVATHLEVLEL 124
                  ++L +
Sbjct: 145 D--KYTTKILSV 154


>UniRef50_A8LN19 GreA/GreB family elongation factor n=8 Tax=Alphaproteobacteria
           RepID=A8LN19_DINSH
          Length = 148

 Score =  115 bits (288), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 47/132 (35%), Positives = 66/132 (50%), Gaps = 2/132 (1%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
            RP I+IN  D   I+ L E        +AD L  E+ RA++    +MP +V+ +     
Sbjct: 17  RRPRIVINADDLSHIEALAEGAMDRNPALADRLLEEIARARIVPAAKMPLNVIGIGKSAT 76

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           FR+ + G+ R  TLVYP     S  ++SVM P+G ALLGL  G   HW   G     L V
Sbjct: 77  FRDETTGQERTVTLVYPEDADISRARVSVMTPIGVALLGLAEGAVFHWNTRGEERRMLTV 136

Query: 122 LELEYQ--PEAA 131
           + +     PE+A
Sbjct: 137 IRVSDPAAPESA 148


>UniRef50_B4RF21 Transcription elongation factor n=2 Tax=cellular organisms
           RepID=B4RF21_PHEZH
          Length = 214

 Score =  115 bits (288), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 42/126 (33%), Positives = 61/126 (48%), Gaps = 4/126 (3%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
             PT+ + + D +R+  L +       P A+ L  ELDRA +    E     V + S V+
Sbjct: 93  RTPTVRVAEADYDRLLNLAD----HDGPGAELLARELDRAIVVREGEKSRPFVRLGSTVE 148

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           +R+    +VR   LV P        +LSV++PVGAALLGL VGD+  W  P G    + V
Sbjct: 149 YRDRLTEKVRTVELVPPDAADIDANRLSVLSPVGAALLGLSVGDTFSWTAPDGRPRVVTV 208

Query: 122 LELEYQ 127
             +   
Sbjct: 209 EAVRRD 214


>UniRef50_Q1AU03 Transcription elongation factor n=1 Tax=Rubrobacter xylanophilus
           DSM 9941 RepID=Q1AU03_RUBXD
          Length = 154

 Score =  114 bits (285), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 31/134 (23%), Positives = 50/134 (37%), Gaps = 10/134 (7%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGL--------PIADALNAELDRAQMCSP-EEMPH 51
           + R  +      A     + E   Y                L   L  A++  P      
Sbjct: 19  VRRKEVAERIRQAREFGDISENSEYDDAKNEQGLLERRISELQRRLRNAKIVDPASSAEE 78

Query: 52  DVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWEL 111
             V + +RV  R + DG  R   +V   +   ++ +LS  +PVG ALL  RVG+ +    
Sbjct: 79  GAVDLGTRVTLRVVGDGRERTFQIVGANEADPASGKLSHASPVGKALLRRRVGEKVRVST 138

Query: 112 PGGVATHLEVLELE 125
           P G     E++ +E
Sbjct: 139 PRGAT-EYEIVSVE 151


>UniRef50_A2SJD8 Transcription elongation factor n=50 Tax=Proteobacteria
           RepID=A2SJD8_METPP
          Length = 213

 Score =  113 bits (284), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 34/139 (24%), Positives = 53/139 (38%), Gaps = 11/139 (7%)

Query: 2   SRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMPH-D 52
            RP ++     A +     E   Y                L   L+ A++  P      D
Sbjct: 77  ERPKVVETVSWAAKNGDRSENGDYLYGKKRLREIDRRIRFLTKRLEIAEVADPSVHRGSD 136

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V   + V +    DG  R  T+    +  +   ++S ++PV  ALL  RVGD +    P
Sbjct: 137 QVFFGATVTYA-APDGVERTITIKGIDEADNLQAEVSWISPVARALLKARVGDEVTLLTP 195

Query: 113 GGVATHLEVLELEYQPEAA 131
            G    +EV+E+ Y P  A
Sbjct: 196 QG-PQTIEVIEVRYPPRPA 213


>UniRef50_C5BN87 Transcription elongation factor GreB n=5 Tax=Proteobacteria
           RepID=C5BN87_TERTT
          Length = 172

 Score =  113 bits (283), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 46/133 (34%), Gaps = 10/133 (7%)

Query: 2   SRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMPHDV 53
            RP +      A  +    E   Y                L   +D  ++    +     
Sbjct: 41  ERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYLRKRIDSLKVVRYAKEQEGS 100

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           V   S VK  N   GE +   +V   ++      +S+ +P+  ALL  +VGD    +   
Sbjct: 101 VYFGSWVKIEN-EAGENKELRIVGYDEIFGEKNYISIDSPMAKALLRKKVGDEAIVKTEV 159

Query: 114 GVATHLEVLELEY 126
           G     E++E+ Y
Sbjct: 160 GEFC-WEIMEISY 171


>UniRef50_Q04HS9 Transcription elongation factor greA n=90 Tax=Bacilli
           RepID=GREA_STRP2
          Length = 160

 Score =  113 bits (283), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 56/133 (42%), Gaps = 9/133 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADA--------LNAELDRAQMCSPEEMPHD 52
           + RP ++     A     L E   Y       A        L  ++  A++ + + +  D
Sbjct: 26  VRRPEVVERIKIARSYGDLSENSEYEAAKDEQAFVEGQISSLETKIRYAEIVNSDAVAQD 85

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V +   V  + + + E  V  +V  A       ++S  +P+G AL+G + GD+   E P
Sbjct: 86  EVAIGKTVTIQEIGEDEEEVYIIVGSAGADAFAGKVSNESPIGQALIGKKTGDTATIETP 145

Query: 113 GGVATHLEVLELE 125
            G    +++L++E
Sbjct: 146 VGS-YDVKILKVE 157


>UniRef50_A7IJH2 GreA/GreB family elongation factor n=4 Tax=Rhizobiales
           RepID=A7IJH2_XANP2
          Length = 143

 Score =  112 bits (281), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 45/126 (35%), Positives = 67/126 (53%), Gaps = 3/126 (2%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFR 63
           P ++++  D ER+  L          +A+ L AELDRA++     +P   V M S+V + 
Sbjct: 16  PALVLSHPDHERLAGLATAALDRIPDVAEELLAELDRARLVPIGRVPATAVQMGSKVTYE 75

Query: 64  NLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLE 123
             + G  R  TLVYP     +  ++SVM P+GAAL+GL  G SI W    G    L+V+E
Sbjct: 76  --AGGNARTVTLVYPEDADIAAARVSVMTPIGAALIGLSKGQSICWTARDGRRHELKVIE 133

Query: 124 LEYQPE 129
           ++  PE
Sbjct: 134 VQ-PPE 138


>UniRef50_Q5P744 Transcription elongation factor n=3 Tax=Proteobacteria
           RepID=Q5P744_AZOSE
          Length = 158

 Score =  112 bits (281), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 47/127 (37%), Positives = 69/127 (54%), Gaps = 9/127 (7%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           M+   +I+ D D  R+  +              L AEL+RA +  P+ +P  VVTM+SRV
Sbjct: 34  MNSEHLILTDNDFVRLMAM---------QPGPQLRAELERAVVVPPDFLPRHVVTMHSRV 84

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
           ++ + + GE R   +VYP +   +  ++SV APVGAALLGL V   I W+ P G    L 
Sbjct: 85  RYLDEASGEQREIQVVYPEEADVAAGKVSVFAPVGAALLGLSVDQVIEWDFPRGPRRRLR 144

Query: 121 VLELEYQ 127
           V E+ +Q
Sbjct: 145 VEEVLHQ 151


>UniRef50_B0T7C4 GreA/GreB family elongation factor n=1 Tax=Caulobacter sp. K31
           RepID=B0T7C4_CAUSK
          Length = 139

 Score =  112 bits (281), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 43/130 (33%), Positives = 70/130 (53%), Gaps = 1/130 (0%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           ++RP II+ + +A+R+  L  +   A    AD L  E++RA++ +  +MP  VV M S V
Sbjct: 8   VARPDIILAETEADRLSALATRLRDAAPQAADLLLEEIERAEIRADLDMPRTVVRMESVV 67

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
           +F + + G  R   LVYP     +  ++SV++ VGA L+GL    +I W    G    L 
Sbjct: 68  QFVDEAHGNPRTVLLVYPRDADIAAGKVSVLSFVGAGLIGLSPHQAIQWPDRNGRQRTLR 127

Query: 121 VLELEYQPEA 130
           +L++   PE 
Sbjct: 128 ILKV-RPPER 136


>UniRef50_D1PEW3 Transcription elongation factor n=1 Tax=Prevotella copri DSM 18205
           RepID=D1PEW3_9BACT
          Length = 154

 Score =  112 bits (281), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 55/133 (41%), Gaps = 9/133 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIAD-ALNAE-------LDRAQMCSPEEMPHD 52
           +  P +     +A     L E   Y         L +        L+ A++     +  D
Sbjct: 22  VELPAVRDAIAEARDKGDLSENFEYHAAKREQGKLLSRISFKQKVLENARVIDKSRLKSD 81

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V + S++K  NL++      T+V P +    + ++S+ +P+  ALLG + G+ +  ++P
Sbjct: 82  TVGLLSKIKITNLANKCSMNYTIVNPHEADLHSGKISIKSPIAKALLGKKAGEEVMVKVP 141

Query: 113 GGVATHLEVLELE 125
            G      +  +E
Sbjct: 142 AG-LLKFRLDSVE 153


>UniRef50_A9EFF1 GreA/GreB family elongation factor n=1 Tax=Oceanibulbus indolifex
           HEL-45 RepID=A9EFF1_9RHOB
          Length = 146

 Score =  112 bits (281), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 44/125 (35%), Positives = 71/125 (56%), Gaps = 1/125 (0%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
             P +I+N  D   ++ L E   +    +AD    E+ RAQ+   ++MP DVV + S+V 
Sbjct: 14  RNPHLILNAADLVHLEELAEGMMHRHPTLADRFFEEIGRAQIVEDQQMPGDVVGIGSKVT 73

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATH-LE 120
           +R+ + G+ +  TLVYP     + +Q+SV+ P+G ALLGLR G S +W+       H L 
Sbjct: 74  YRDETTGQNKSVTLVYPEDADITRSQVSVITPIGVALLGLREGASFYWDTRRENQRHMLT 133

Query: 121 VLELE 125
           +L++E
Sbjct: 134 ILKVE 138


>UniRef50_C0QWD9 Transcription elongation factor n=2 Tax=Brachyspira
           RepID=C0QWD9_BRAHW
          Length = 154

 Score =  111 bits (279), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 32/130 (24%), Positives = 55/130 (42%), Gaps = 12/130 (9%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHDVVT 55
           P II    +A     L E   Y                L ++L   ++  P  +  D VT
Sbjct: 28  PAII---AEAREKGDLKENAEYHAAKEKQGLLNAQISKLESDLAGCEIIDPANLDKDTVT 84

Query: 56  MNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGV 115
              RVK ++ S   V    +V   +   S  +++++ P+   LLG ++GD +  ++P G 
Sbjct: 85  FGKRVKVKDKSRNAVFEYRIVGELEADMSKNEITIVTPIAKGLLGKKIGDVVTIKVPAG- 143

Query: 116 ATHLEVLELE 125
              LE+LE+ 
Sbjct: 144 DKVLEILEIS 153


>UniRef50_Q4A759 Transcription elongation factor greA n=4 Tax=Mycoplasma
           RepID=GREA_MYCH7
          Length = 160

 Score =  111 bits (278), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 26/132 (19%), Positives = 52/132 (39%), Gaps = 11/132 (8%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHD 52
           + R  +I    DA     L E   Y                L   + +A++    ++   
Sbjct: 29  VERVNVIQEIKDARSQGDLSENAEYDVAREKQGIIESRIRELETIISKAKIIK-ADLGSS 87

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V++ S+V   N+  GE++   +V         +++S  +P+  ALLG   GD +  ++ 
Sbjct: 88  RVSIGSKVSLENVESGEIQTFQIVSSIDADPFKSKISNFSPIAQALLGQHQGDEVEVDV- 146

Query: 113 GGVATHLEVLEL 124
                 + +LE+
Sbjct: 147 -NEKYSVRILEV 157


>UniRef50_B7L307 GreA/GreB family elongation factor n=1 Tax=Methylobacterium
           chloromethanicum CM4 RepID=B7L307_METC4
          Length = 147

 Score =  110 bits (277), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 47/131 (35%), Positives = 67/131 (51%), Gaps = 2/131 (1%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLP--IADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           RP +II   D   +  +      +     +   L  ELDRA +  P  +P  VVTM++RV
Sbjct: 10  RPPLIIPMSDFRFLREIAAGTGVSQARGSVVAWLAEELDRATVVPPGAVPPRVVTMHARV 69

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
           ++R+    +VR  TL YP +     + +SV+ PVGAAL+GL  G SI W  P G    L 
Sbjct: 70  EYRDDVTDQVRCVTLTYPGEEDAYASGISVLTPVGAALVGLSEGHSIRWRTPSGGLRGLT 129

Query: 121 VLELEYQPEAA 131
           VL + + P  A
Sbjct: 130 VLRVRFAPHHA 140


>UniRef50_C1XQ58 Transcription elongation factor n=2 Tax=Meiothermus
           RepID=C1XQ58_9DEIN
          Length = 159

 Score =  110 bits (277), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 30/135 (22%), Positives = 48/135 (35%), Gaps = 10/135 (7%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIAD--------ALNAELDRAQMCSPEEMPHD 52
           + R  I      A     L E   Y     A          L + L RA +         
Sbjct: 27  VKRQEIAAAFEQAIEEGDLRENAGYDEARRAQWDNDRRISELESILARAVVVEAGNGTPL 86

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V +   V+      G     T+V   +    N ++S  +P+G  L+G +VGD + +  P
Sbjct: 87  EVGLGVSVELE-TDTGARMSLTIVGSHEADVFNGKISNESPMGQRLMGKKVGDRVEYPSP 145

Query: 113 GGVATHLEVLELEYQ 127
            G      ++EL Y+
Sbjct: 146 KG-VQSYTIVELSYK 159


>UniRef50_A6H247 Transcription elongation factor greA n=33 Tax=Bacteroidetes
           RepID=GREA_FLAPJ
          Length = 158

 Score =  110 bits (277), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 32/135 (23%), Positives = 51/135 (37%), Gaps = 9/135 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADAL--------NAELDRAQMCSPEEMPHD 52
           + RP    +  +A     L E   Y     A  L              A++    ++   
Sbjct: 25  IERPKASADIAEARDKGDLSENAEYDAAKEAQGLLELKIKKMEEVYSNARLIDESQLDVS 84

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
              + S VK +N S+G      LV  ++      ++SV +P+G  LLG  VG+     +P
Sbjct: 85  KALVLSHVKIKNQSNGMEMSYHLVAESEADLKTGKISVTSPIGKGLLGKSVGEIAEITVP 144

Query: 113 GGVATHLEVLELEYQ 127
            G     EVLE+   
Sbjct: 145 NG-ILKFEVLEITRD 158


>UniRef50_Q01RT9 GreA/GreB family elongation factor n=2 Tax=Acidobacteria
           RepID=Q01RT9_SOLUE
          Length = 164

 Score =  110 bits (277), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 31/124 (25%), Positives = 47/124 (37%), Gaps = 9/124 (7%)

Query: 8   INDLDAERIDILLEQPAYAGLPIAD--------ALNAELDRAQMCSPEEMPHDVVTMNSR 59
              L A     L E   Y                L + L +  M    ++P D   + S 
Sbjct: 25  KEILKARLHGDLKENAEYHAAKDRQGFVSARLGQLKSRLGQLAMIDFTKIPRDKAGLGST 84

Query: 60  VKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHL 119
           V   ++   +     LV   +    N ++S  +P+G ALLG  VGD +    PGG    L
Sbjct: 85  VVVLDVKSDQEITYHLVTSEEADAPNGKVSTTSPIGRALLGKTVGDEVKVMSPGG-VKEL 143

Query: 120 EVLE 123
           E+L+
Sbjct: 144 EILK 147


>UniRef50_Q2S2N3 Transcription elongation factor n=1 Tax=Salinibacter ruber DSM
           13855 RepID=Q2S2N3_SALRD
          Length = 164

 Score =  110 bits (277), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 49/133 (36%), Gaps = 9/133 (6%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHDV 53
            R  I     +A     L E   Y                +   + RA++     +    
Sbjct: 33  ERSRIADEIAEARAKGDLSENAEYDAAKEEQGKLEARIKQIEDTIARARIVDESTVDDSK 92

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
             + S V   NL  G+ +  TLV   +   S  ++SV +P+G  LL    GD +  ++P 
Sbjct: 93  AYILSDVTVENLDTGDEQTFTLVSEEEANISENKISVDSPIGEGLLAQEEGDEVSIDVPA 152

Query: 114 GVATHLEVLELEY 126
           G   H ++ ++  
Sbjct: 153 GT-VHFKIKDISR 164


>UniRef50_C1F9R4 Transcription elongation factor GreA n=1 Tax=Acidobacterium
           capsulatum ATCC 51196 RepID=C1F9R4_ACIC5
          Length = 165

 Score =  110 bits (276), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 31/123 (25%), Positives = 46/123 (37%), Gaps = 9/123 (7%)

Query: 9   NDLDAERIDILLEQPAYAGLPIADA--------LNAELDRAQMCSPEEMPHDVVTMNSRV 60
               A  +  L E   Y                L   +    + +   +PHD V   S V
Sbjct: 27  EIKKAAALGDLSENAEYHMAKQRQEFVNARLGQLKKRMAELSLVNLANIPHDRVAFGSTV 86

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
           +  + S  E     LV   +   S   +S  +P+G AL+G +VGD+     P G    LE
Sbjct: 87  EVFDTSKDEKIEYKLVTSEESDVSKGLISTTSPIGRALIGKQVGDTATVVTPSG-NRELE 145

Query: 121 VLE 123
           VL+
Sbjct: 146 VLK 148


>UniRef50_Q2N9J5 Transcription elongation factor n=2 Tax=Erythrobacter
           RepID=Q2N9J5_ERYLH
          Length = 159

 Score =  110 bits (276), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 31/134 (23%), Positives = 46/134 (34%), Gaps = 11/134 (8%)

Query: 2   SRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMPH-D 52
            RP I+     A       E   Y                L   +  A++  P E P  D
Sbjct: 27  ERPEIVEIVSWAAGNGDRSENGDYIYGRKRMREIDRELAHLARRMKHARVIEPSEQPDKD 86

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
                + +   +  D   +  TLV   +   S  ++   +P+  AL G RVGD     LP
Sbjct: 87  RAFFGATLTLADEDD-ARKTVTLVGDDEQDASAGKIGWSSPLARALRGARVGDLRTVHLP 145

Query: 113 GGVATHLEVLELEY 126
            G     EV+ + Y
Sbjct: 146 SGE-REWEVMAIAY 158


>UniRef50_Q9JVD0 Transcription elongation factor greB n=64 Tax=Bacteria
           RepID=GREB_NEIMA
          Length = 163

 Score =  110 bits (276), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 29/134 (21%), Positives = 48/134 (35%), Gaps = 11/134 (8%)

Query: 2   SRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPE-EMPHD 52
            RP I+     A       E   Y                L   L+ A +  PE     D
Sbjct: 28  ERPEIVQIVNWAAGNGDRSENGDYLYGKRRMREIDRRIRFLTKRLEAAVVVDPELREATD 87

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V   + V      DG  +   +V   ++  +  ++S ++P+   L+  R GD +    P
Sbjct: 88  QVFFGATVGLL-RGDGREQTVKIVGIDEIDTAQNKISWISPLARCLIKAREGDEVVLNTP 146

Query: 113 GGVATHLEVLELEY 126
            G    +E+L +EY
Sbjct: 147 EGRE-EIEILSVEY 159


>UniRef50_A2RGA4 Transcription elongation factor greA n=111 Tax=Firmicutes
           RepID=GREA_STRPG
          Length = 160

 Score =  110 bits (275), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 51/133 (38%), Gaps = 9/133 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADA--------LNAELDRAQMCSPEEMPHD 52
           + RP I+     A     L E   Y       A        L  ++  A++   + +  D
Sbjct: 26  VRRPEIVERIKIARSYGDLSENSEYDAAKDEQAFVEGQISTLETKIRYAEIIDSDAVAKD 85

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V +   V  + +   +     +V  A     + ++S  +P+  AL+G + GD +  E P
Sbjct: 86  EVAIGKTVIVQEVGTTDKDTYHIVGAAGADIFSGKISNESPIAQALIGKKTGDKVRIESP 145

Query: 113 GGVATHLEVLELE 125
                 +E++ +E
Sbjct: 146 A-ATYDVEIISVE 157


>UniRef50_Q3Z8E7 Transcription elongation factor greA n=2 Tax=Dehalococcoides
           RepID=GREA_DEHE1
          Length = 156

 Score =  109 bits (274), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 29/134 (21%), Positives = 50/134 (37%), Gaps = 9/134 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHD 52
           + R  +I     A     + E   Y                +  EL  A +    +    
Sbjct: 24  VKRIDVIEEMRLAAMDKDMRENAPYHAAKEQRGQIEGRIKEIEHELKYADVSEYTDTNTS 83

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V M S VK R+  +GE    TLV P ++     ++S  +P+G A+     G+ I  E+P
Sbjct: 84  KVNMGSTVKLRDPKNGECCTYTLVSPKEIEPLKGKISASSPIGKAVFNRNKGEQIEIEVP 143

Query: 113 GGVATHLEVLELEY 126
            G      + ++ +
Sbjct: 144 SGTLQ-YIIEDISF 156


>UniRef50_A7HFE1 GreA/GreB family elongation factor n=1 Tax=Anaeromyxobacter sp.
           Fw109-5 RepID=A7HFE1_ANADF
          Length = 164

 Score =  109 bits (274), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 45/140 (32%), Positives = 70/140 (50%), Gaps = 8/140 (5%)

Query: 5   TIIINDLDAERIDILLEQP--------AYAGLPIADALNAELDRAQMCSPEEMPHDVVTM 56
            +++ + DA R+   L +            G    + L   L  A +  P+ +P +VVTM
Sbjct: 25  RLLLTEQDAARLRATLARASLESMASADARGENAVELLATALRSAIVVPPDRIPAEVVTM 84

Query: 57  NSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVA 116
            SR+   +++ G  R   LVYP +       +SV++PVG ALLGL  G  + W LP G  
Sbjct: 85  RSRLVLEDVASGARREVVLVYPEEERTHEGHVSVLSPVGVALLGLSEGALVGWPLPSGRT 144

Query: 117 THLEVLELEYQPEAAGDYLL 136
             L+V  ++YQPEA  ++ L
Sbjct: 145 AVLQVESVQYQPEAVEEFHL 164


>UniRef50_A6NPJ1 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus
           ATCC 29799 RepID=A6NPJ1_9BACE
          Length = 197

 Score =  109 bits (273), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 30/131 (22%), Positives = 52/131 (39%), Gaps = 9/131 (6%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHDVV 54
           RP ++    +A     L E   Y                L   +  A + S +  P D V
Sbjct: 55  RPQLLEAVKEARGFGDLSENFEYKAAKQEKNRNESRIRFLENMIRTAVVISDQAAP-DTV 113

Query: 55  TMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGG 114
            +  +V      D E     +V   +    + ++S  +PVG+ALLG RVGD I+ ++   
Sbjct: 114 GLYDKVTVYLEEDDETETYQVVTTMRQDALHGRISKESPVGSALLGKRVGDRIYIQVNDN 173

Query: 115 VATHLEVLELE 125
              ++ +  +E
Sbjct: 174 YGYYVVIKAIE 184


>UniRef50_Q98F06 Nucleoside diphosphate kinase regulator n=2 Tax=Mesorhizobium
           RepID=Q98F06_RHILO
          Length = 140

 Score =  109 bits (273), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 40/125 (32%), Positives = 60/125 (48%), Gaps = 3/125 (2%)

Query: 2   SRP--TIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSR 59
            RP   I+I+D D +R+  L           A+ L  E+DRA +     MP DVV M S 
Sbjct: 7   PRPSSRILISDTDHDRLTGLARALLDRAPETAEELLFEMDRAVVTDAAAMPADVVRMGSA 66

Query: 60  VKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHL 119
           V  R    G  +   LVYP +   +  ++SV+ P+G AL+G  +G ++ W   GG    +
Sbjct: 67  VTVR-GEGGATQRIMLVYPGEADIAENRISVLTPMGTALIGASIGQAVCWSSRGGRELSV 125

Query: 120 EVLEL 124
            V  +
Sbjct: 126 TVEAV 130


>UniRef50_B5ZLJ0 Transcription elongation factor GreB n=5 Tax=Proteobacteria
           RepID=B5ZLJ0_GLUDA
          Length = 180

 Score =  109 bits (273), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 34/139 (24%), Positives = 52/139 (37%), Gaps = 11/139 (7%)

Query: 2   SRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPE-EMPHD 52
            RP I+     A       E   Y                L   +++A +  P  +   D
Sbjct: 42  ERPRIVDIVSWAAGNGDRSENGDYLYGKKRLREIDRRVRFLTRRIEKAIVVDPAAQTRRD 101

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V   + V +    D E R   +V   +   +  Q+S+ +PV  ALLG RVGD +    P
Sbjct: 102 RVFFGATVTYVTEDDTE-RTVVIVGVDESDLAAGQVSLASPVARALLGGRVGDEVRLLTP 160

Query: 113 GGVATHLEVLELEYQPEAA 131
            G    +E+L + Y   A 
Sbjct: 161 AGAEM-IEILRIAYPAPAE 178


>UniRef50_Q12SN9 Transcription elongation factor GreB n=17 Tax=Bacteria
           RepID=Q12SN9_SHEDO
          Length = 166

 Score =  109 bits (273), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 45/134 (33%), Gaps = 11/134 (8%)

Query: 3   RPTIIINDLDAERIDILLEQPAYA--------GLPIADALNAELDRAQMCSPEEMPHDVV 54
           RP I      A  +    E   Y                L   ++  ++          V
Sbjct: 32  RPEITKKVAWAASLGDRSENADYKENKRLLRQIDGRVRFLRKRIEALKVVPYAAEQEGKV 91

Query: 55  TMNSRVKFRNLSDGEVRVRTLVYPAKM-TDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
              + V+  N  +G  +   +V P ++  D+   +S+ +P+  ALL   V D      P 
Sbjct: 92  FFGAWVEIEN-DEGVKKRFRIVGPDEIYGDAKGYISIDSPMARALLKKEVDDDASVLTPT 150

Query: 114 GVATHLEVLELEYQ 127
           G      + ++ YQ
Sbjct: 151 GEQFWY-INKIFYQ 163


>UniRef50_Q8P7P8 Transcription elongation factor greB n=53 Tax=Proteobacteria
           RepID=GREB_XANCP
          Length = 168

 Score =  109 bits (273), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 27/134 (20%), Positives = 48/134 (35%), Gaps = 9/134 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMPHD 52
           + RP ++     A       E   Y                L+  L+  ++         
Sbjct: 33  LRRPEVVRALAAAAAEGDRSENAEYTYRKKQLGEIDRRVRYLSKRLEALRVVDTAPTDPQ 92

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V   ++V+  +   GE+    +V P +       +S+ +P+  ALL  RV D    +LP
Sbjct: 93  AVFFGAQVELEDADSGELLRYRIVGPDETDAGRGWISIDSPLARALLKKRVDDEFEAQLP 152

Query: 113 GGVATHLEVLELEY 126
            G      V+ +EY
Sbjct: 153 SGK-HTFVVVVVEY 165


>UniRef50_B2V1C0 Transcription elongation factor n=28 Tax=Clostridium
           RepID=B2V1C0_CLOBA
          Length = 155

 Score =  109 bits (273), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 29/134 (21%), Positives = 54/134 (40%), Gaps = 9/134 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMPHD 52
           + R  I    L A       E   Y                L   +  A +    E+   
Sbjct: 23  VKRAEIAKEKLVAAAHGDRSENAEYKEACANYRENDNRIQYLMTMISTATVIDDTEIDKS 82

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            + +NS+ + + + D +  V TLV    +   N  +S+ + +G AL+G + G+++  E P
Sbjct: 83  SLGINSKARIKFVEDDDEDVITLVTTMDLDPENMLISIESDLGKALMGKKAGETVEVEAP 142

Query: 113 GGVATHLEVLELEY 126
            G    +++LE+ Y
Sbjct: 143 -GAKYTVKILEILY 155


>UniRef50_B1H062 Transcription elongation factor n=1 Tax=uncultured Termite group 1
           bacterium phylotype Rs-D17 RepID=B1H062_UNCTG
          Length = 158

 Score =  109 bits (272), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 49/133 (36%), Gaps = 10/133 (7%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGL--------PIADALNAELDRAQMCSPEEMPHDV 53
            +P I      A     L E   Y                L +++  A++   + +  D 
Sbjct: 24  RKPLIQDEIASAREHGDLRENAEYCAAKETLANLIRRIMELTSKIACAKIIEEQNIDSDK 83

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           V +   V  ++   G      +V   +      ++S+ +P+   LLG   G+++  ELP 
Sbjct: 84  VFIGVTVTIKD-EYGADYQYAIVDLEEADPVANRISIQSPLAQGLLGHTAGETVAVELPA 142

Query: 114 GVATHLEVLELEY 126
           G     ++L++  
Sbjct: 143 GKT-KFKILKISR 154


>UniRef50_O51157 Transcription elongation factor greA n=23 Tax=Borrelia
           RepID=GREA_BORBU
          Length = 901

 Score =  109 bits (272), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 48/133 (36%), Gaps = 9/133 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADA--------LNAELDRAQMCSPEEMPHD 52
           +  P        A  +  L E   Y                L  E++ A++   +++   
Sbjct: 765 VEIPENSKEIGKARELGDLKENAEYHSAKEKQQFLTKRLNSLMLEIENAKVIDTKDLQSS 824

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
           VV   ++V   N   G+     ++ P +       +S  +P G  LL  R GDS+++ + 
Sbjct: 825 VVGFGTKVVILNEVTGKDESYLILGPWESNPDEGIISYKSPFGENLLDSREGDSLNFVI- 883

Query: 113 GGVATHLEVLELE 125
                   V ++E
Sbjct: 884 NNTNFKYFVKKIE 896


>UniRef50_A5VME9 Transcription elongation factor GreA n=49 Tax=Lactobacillaceae
           RepID=A5VME9_LACRD
          Length = 165

 Score =  109 bits (272), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 51/131 (38%), Gaps = 11/131 (8%)

Query: 3   RPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMPHDVV 54
           RP  I     A  +  L E   Y                LN +L  A++ +P+      +
Sbjct: 37  RPAKIEQLKAARALGDLSENTEYSTAKRELRHLESRLRYLNKQLQYAEIVTPKN--DHTI 94

Query: 55  TMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGG 114
            + + V      D E     +V   +   +  ++S  +P+G A+L    G ++  E P  
Sbjct: 95  DLGTTVTIEFEDDHEQETYHIVGKQEADLAKQKISFDSPLGQAILHQTAGTTVTVEAPQ- 153

Query: 115 VATHLEVLELE 125
            +  ++++++E
Sbjct: 154 SSYKVKIVKVE 164


>UniRef50_A5IYH4 Transcription elongation factor greA n=3 Tax=Mycoplasma
           RepID=GREA_MYCAP
          Length = 163

 Score =  108 bits (271), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 55/135 (40%), Gaps = 11/135 (8%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHD 52
           + RP +  +  +A     L E   Y                L   L+ A++   +    +
Sbjct: 29  VERPAVQASLKEARAQGDLSENAEYDAARDRQSEVERRILELERILENAEIIDTKSAVQN 88

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLR-VGDSIHWEL 111
              + + V++ N+   +  V T++ P        ++S  +PV  A++    +GD +  E+
Sbjct: 89  KAGIGATVRYLNMKTNKELVVTIMGPHDSNPIENKISNESPVAQAIMEANGIGDVVEVEV 148

Query: 112 PGGVATHLEVLELEY 126
           P     +++VL++ Y
Sbjct: 149 P--QKYNIKVLDISY 161


>UniRef50_UPI0001C37CEA transcription elongation factor GreA n=1 Tax=Ruminococcus
           flavefaciens FD-1 RepID=UPI0001C37CEA
          Length = 156

 Score =  108 bits (270), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 49/132 (37%), Gaps = 9/132 (6%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHDV 53
            R  +      A     L E   Y                L   +D A++     +  D 
Sbjct: 25  KRKEVAERLKVARSYGDLSENAEYDEAKNEQAILEAHIAELQYTIDNAEIVDDSNISVDE 84

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           + M+S++  + L  G++   T+V          ++S  +P+G A +  RVGD    + P 
Sbjct: 85  IGMSSKITIKRLDTGKIETFTIVSTNHANVREGKISDASPIGKAAMKKRVGDVFIVDAPA 144

Query: 114 GVATHLEVLELE 125
           G     EV+E+ 
Sbjct: 145 GE-LKFEVVEIS 155


>UniRef50_A4BB58 Nucleoside diphosphate kinase regulator n=1 Tax=Reinekea blandensis
           MED297 RepID=A4BB58_9GAMM
          Length = 142

 Score =  108 bits (270), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 48/128 (37%), Positives = 74/128 (57%), Gaps = 3/128 (2%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
            +P + I++ D +R+  L+           D L +ELDRA +C P E+P D V + S V+
Sbjct: 4   PKPDVFISEHDWQRLQRLVAHYPDHEA--IDWLESELDRATVCLPNELPADAVQLGSVVR 61

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           F+  S G+V +R LV P +    +  +SV++PVG ALLGLRVGD I W    G +T + +
Sbjct: 62  FQLSSSGQVYLRELVLP-EQRQHDEHISVLSPVGMALLGLRVGDEIAWPSSPGQSTTVRI 120

Query: 122 LELEYQPE 129
           L+++   E
Sbjct: 121 LDVKQDRE 128


>UniRef50_A4CMB9 Nucleoside diphosphate kinase regulator n=1 Tax=Robiginitalea
           biformata HTCC2501 RepID=A4CMB9_9FLAO
          Length = 139

 Score =  108 bits (270), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 35/132 (26%), Positives = 59/132 (44%), Gaps = 6/132 (4%)

Query: 1   MSRPTIIINDLDAERIDILLE-QPAYAGL---PIADALNAELDRAQMCSPEEMPHDVVTM 56
           M    ++I   +   +   +     Y           L  ELD A++    EM +DVV  
Sbjct: 1   MKYKQLLIEKKEYVLLKRYVNLSAHYHDATLWQSIQKLLTELDSAKIVDEAEMQNDVVRF 60

Query: 57  NSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVA 116
           +S +   +  +G  R   LV P +   S  ++S++ P+G AL G   GD++ WE P G  
Sbjct: 61  HSIITVTS-ENGWSRRVQLVLPPERDVSKDKISILTPMGIALFGYAEGDTVSWEFPSG-P 118

Query: 117 THLEVLELEYQP 128
             L + ++E +P
Sbjct: 119 KRLRIEKVEQEP 130


>UniRef50_Q1PYP5 Transcription elongation factor n=1 Tax=Candidatus Kuenenia
           stuttgartiensis RepID=Q1PYP5_9BACT
          Length = 741

 Score =  108 bits (270), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 24/122 (19%), Positives = 50/122 (40%), Gaps = 9/122 (7%)

Query: 12  DAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHDVVTMNSRVKFR 63
           +A     L E   Y             A+ L A+L +     P  +  ++V+  ++V  +
Sbjct: 618 EAISRGDLRENAEYQAAREKQAQLIEKAERLKADLQKIVFIEPYTVKTNIVSPGTKVTIK 677

Query: 64  NLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLE 123
           N         TL+ P         +S ++P+G  LL  + G+++  +LP       ++++
Sbjct: 678 NKDKETTETYTLLGPWDADIDKNIISYLSPIGKGLLNKKTGETVTIQLPENEIVC-DIIK 736

Query: 124 LE 125
           +E
Sbjct: 737 IE 738


>UniRef50_B2KBD2 GreA/GreB family elongation factor n=1 Tax=Elusimicrobium minutum
           Pei191 RepID=B2KBD2_ELUMP
          Length = 156

 Score =  108 bits (270), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 51/131 (38%), Gaps = 9/131 (6%)

Query: 5   TIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHDVVTM 56
            + +   +A +   L E   YA               L  +L  AQ+    ++      +
Sbjct: 27  KLSLEIGEAAQQGDLRENAEYAAAKSRQEETLVKIQDLEQKLRNAQITDDIQVDKSEARI 86

Query: 57  NSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVA 116
            + V   ++S       TLV   +       LSV +P+  ++LG + G+     LP G  
Sbjct: 87  GATVTVHDISADIDFTYTLVGSMESNPEKGLLSVQSPLAVSILGKKEGEEFEAVLPKGKK 146

Query: 117 THLEVLELEYQ 127
              ++++LEY+
Sbjct: 147 M-YKLVKLEYK 156


>UniRef50_A1U1V6 GreA/GreB family elongation factor n=2 Tax=Marinobacter
           RepID=A1U1V6_MARAV
          Length = 128

 Score =  108 bits (270), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 53/125 (42%), Positives = 75/125 (60%), Gaps = 1/125 (0%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFR 63
           P I +++ D  R+  LLE+ A     +AD L  EL RA M    +MP  VVTMNSRV+F 
Sbjct: 5   PHITVSEEDYNRLSTLLERVAGQSD-VADGLEDELSRADMKPLADMPEGVVTMNSRVRFL 63

Query: 64  NLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLE 123
           N   GE     LVYP ++ D++ ++S++AP GAA+LGL +G SI W + G    HL+V+ 
Sbjct: 64  NEDTGEEHEVALVYPHEVGDADHKVSILAPAGAAMLGLSIGSSIEWPMKGRKPIHLKVIG 123

Query: 124 LEYQP 128
           +   P
Sbjct: 124 VTRNP 128


>UniRef50_A6NZ08 Transcription elongation factor n=1 Tax=Bacteroides capillosus ATCC
           29799 RepID=A6NZ08_9BACE
          Length = 157

 Score =  107 bits (269), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 47/133 (35%), Gaps = 9/133 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHD 52
           +    +     +A     L E   Y                +   L+   +   E     
Sbjct: 25  VREKEVADQIKEARSFGDLSENSEYDEAKNEQGKLYSRIAEVENILENCVVIEEEIHDGK 84

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V + S++K  ++   E     +V   +    N ++S  +P G ALLG  VG+ +  E P
Sbjct: 85  TVRLGSKLKVLDVEFNEELDYEVVGSQEADPMNGRISEDSPFGRALLGKSVGEDVVVEAP 144

Query: 113 GGVATHLEVLELE 125
            G   H +VL + 
Sbjct: 145 AGA-LHYKVLSIS 156


>UniRef50_C6XWY5 Transcription elongation factor GreA/GreB domain protein n=1
           Tax=Pedobacter heparinus DSM 2366 RepID=C6XWY5_PEDHD
          Length = 125

 Score =  107 bits (269), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 40/126 (31%), Positives = 65/126 (51%), Gaps = 2/126 (1%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           M   ++ ++  D + +   LE+   +     + L AEL  A + + EE+P DVV + S  
Sbjct: 1   METKSLSLSKSDFKLLKEHLEKSNMSAYNK-EKLQAELKAATIYTEEELPSDVVCLKSEA 59

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
           +  N+  G+     LV P +      ++SV AP+G AL G R GDSI+WE+P G     +
Sbjct: 60  RIANVKTGKEFTFKLVMPEEANIKAQKVSVFAPIGIALFGYRTGDSINWEMPDG-IQEFK 118

Query: 121 VLELEY 126
           +LE+  
Sbjct: 119 ILEVNR 124


>UniRef50_B1ZU20 GreA/GreB family elongation factor n=1 Tax=Opitutus terrae PB90-1
           RepID=B1ZU20_OPITP
          Length = 143

 Score =  107 bits (268), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 35/131 (26%), Positives = 59/131 (45%), Gaps = 3/131 (2%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           M+   +  +  D  ++ +L    +  G P    L +EL R  +     +P   + + S V
Sbjct: 1   MNTSPLYFSIEDYTKLSLLATATSRPGTPS--QLRSELSRGVVVDATALPPTAIRLGSTV 58

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
           +  +L  GE+   TLV P +      +LSV+AP+G A++G   G  + W  PGG    L 
Sbjct: 59  EIEDLESGEIETYTLVLPEQANVDARKLSVLAPIGTAVIGCLQGAEVAWSTPGGT-RRLR 117

Query: 121 VLELEYQPEAA 131
           +  +    E A
Sbjct: 118 IGRVSPPAEPA 128


>UniRef50_B1AIU2 Transcription elongation factor greA n=28 Tax=Ureaplasma
           RepID=GREA_UREP2
          Length = 156

 Score =  107 bits (267), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 23/132 (17%), Positives = 45/132 (34%), Gaps = 9/132 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHD 52
           +  P I     DA     L E   Y              D +   L+  ++        D
Sbjct: 24  VKWPAITKQLQDAREQGDLSENADYDAAKNEQAALKKRKDEIEEILENYELIEDVLRSTD 83

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V++ S ++  N       V TLV          ++S+  P+G AL+  + G  +     
Sbjct: 84  EVSIGSTIEIYNYQKDCEEVITLVGSMDSDPFANKISIDTPLGKALVKQKKGTEVTVHTL 143

Query: 113 GGVATHLEVLEL 124
                 ++++++
Sbjct: 144 A-SPYKVKIIKI 154


>UniRef50_B5Y9H5 Transcription elongation factor n=1 Tax=Coprothermobacter
           proteolyticus DSM 5265 RepID=B5Y9H5_COPPD
          Length = 163

 Score =  106 bits (266), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 55/133 (41%), Gaps = 9/133 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHD 52
           + R  +     +A  +  L E   +                L   +  A++   E++  D
Sbjct: 28  VKRKEVAEKIQEARALGDLSENSEFEAAKEEQALLEERIARLETLVYNARVVKAEDLALD 87

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVY-PAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWEL 111
            V++ ++V   + S G      +V    ++   + ++S  +P+G+ LLG + GD +  +L
Sbjct: 88  QVSVGTKVLVLDESAGREESFIIVGNSEEVDPFSGKISSKSPLGSRLLGRKRGDRVEIKL 147

Query: 112 PGGVATHLEVLEL 124
             G     E+L++
Sbjct: 148 RNGSKAVYEILDI 160


>UniRef50_Q2GA51 GreA/GreB family elongation factor n=1 Tax=Novosphingobium
           aromaticivorans DSM 12444 RepID=Q2GA51_NOVAD
          Length = 159

 Score =  106 bits (265), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 44/122 (36%), Positives = 69/122 (56%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKF 62
           RP II+ D +A+ +  L    +     I+  L  E+ RAQ+   +++P D V M S V+F
Sbjct: 30  RPQIILIDSEADALADLALAASDRLPEISRMLMEEIGRAQIVPAQDLPPDAVAMRSVVRF 89

Query: 63  RNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVL 122
           R+ + G VR  TLVYPA+   +  ++S++ PVGA L+GLR G SI W    G    + + 
Sbjct: 90  RDEATGAVRTVTLVYPAEADIAQDRVSILTPVGAGLIGLRAGQSIDWPNVRGKQRAITIE 149

Query: 123 EL 124
           ++
Sbjct: 150 QV 151


>UniRef50_Q2G8D8 GreA/GreB family elongation factor n=4 Tax=cellular organisms
           RepID=Q2G8D8_NOVAD
          Length = 182

 Score =  105 bits (264), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 33/138 (23%), Positives = 48/138 (34%), Gaps = 12/138 (8%)

Query: 2   SRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEM-PHD 52
            RP I+     A       E   Y                L   +  +++  P       
Sbjct: 48  ERPAIVEIVSWAAGNGDRSENGDYLYGRKRMREIDRELAFLARRMKASRVVDPARQEDRS 107

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V   + V+  +  D   +V TLV   +   S   +   AP+  AL G RVGD     LP
Sbjct: 108 RVLFGATVEIADEDDN-RKVLTLVGDDEQDASKGLIGWSAPIAKALRGSRVGDLRIVRLP 166

Query: 113 GGVATHLEVLELEYQPEA 130
            G     E++ + Y PEA
Sbjct: 167 SG-QKEWEIMAISY-PEA 182


>UniRef50_B0N6V6 Transcription elongation factor n=4 Tax=Bacteria RepID=B0N6V6_9FIRM
          Length = 161

 Score =  105 bits (264), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 52/137 (37%), Gaps = 12/137 (8%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHD 52
           + RP +I     A     L E   Y                ++  L  A++ S E+M   
Sbjct: 26  VERPKVIEELQLARSQGDLSENADYDAAREKQAHLESRIKEIDYMLQNAEVISEEQMDLK 85

Query: 53  VVTMNSRVKFRN--LSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWE 110
           VV   + V   +    D E     +V   +    N ++S  +P+  A+LG  V + +   
Sbjct: 86  VVKPGTTVTILDLSEKDAEPESYQIVGYTETDPLNGKISNESPLAKAVLGHGVNEIVTVG 145

Query: 111 LPGGVATHLEVLELEYQ 127
           +       ++++ +E++
Sbjct: 146 VAD--PYDVKIVNIEFK 160


>UniRef50_Q15Z69 GreA/GreB family elongation factor n=1 Tax=Pseudoalteromonas
           atlantica T6c RepID=Q15Z69_PSEA6
          Length = 128

 Score =  105 bits (264), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 38/124 (30%), Positives = 65/124 (52%), Gaps = 2/124 (1%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
            +P III+  D   ++  LE+          A+  ELDRA + + +++P +VV + S+V 
Sbjct: 3   KQPDIIISTADLAELEYQLERSKLPDDA-IRAIENELDRATIVACKDLPENVVAIGSQVT 61

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           F+ L   +V  + L  P         +SV AP+G+AL+GL  G  I W+   G    +E+
Sbjct: 62  FKILDSQKVFTKALCLPHDSVKFEDSISVFAPIGSALIGLSTGQCIKWQTQRG-QQSVEI 120

Query: 122 LELE 125
           +++E
Sbjct: 121 IKVE 124


>UniRef50_A0LZA7 Transcription elongation factor n=1 Tax=Gramella forsetii KT0803
           RepID=A0LZA7_GRAFK
          Length = 146

 Score =  105 bits (264), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 36/129 (27%), Positives = 59/129 (45%), Gaps = 6/129 (4%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGL----PIADALNAELDRAQMCSPEEMPHDVVTM 56
           M    +II   + + +  ++    Y            LN EL  A++ +  EMP DV+ +
Sbjct: 1   MRYGELIIEKKEYDFLKQIMSLAKYHKDTSYKASIYKLNEELKDARILTNSEMPLDVIRL 60

Query: 57  NSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVA 116
           NS V          R   +V P K      ++SV+AP+G AL G   GD+I W  P G +
Sbjct: 61  NSLVTIE-TPYAVERTYQIVTPEKGDIRKNKISVLAPMGLALFGYAQGDNITWTFPLGES 119

Query: 117 THLEVLELE 125
             +++ E++
Sbjct: 120 Y-IKIKEVK 127


>UniRef50_C7T958 Transcription elongation factor n=4 Tax=Lactobacillus rhamnosus
           RepID=C7T958_LACRG
          Length = 165

 Score =  105 bits (263), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 30/138 (21%), Positives = 55/138 (39%), Gaps = 13/138 (9%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHDVV 54
           RP  I N  +A  +    E   Y+               L+  +  A++ +P     ++ 
Sbjct: 26  RPAKIKNLAEAAALGDRSENAEYSAAKRELRQLEGRLRYLDKLIRYAKVTTPAA--ANLA 83

Query: 55  TMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGG 114
            + + V      D +     LV PA+      +L++ +P+GAA+    VGD++    P G
Sbjct: 84  DIGNWVTLEFDDDQDEDTYELVGPAEAGMGAAKLAINSPLGAAVRRHHVGDTVTVTAPSG 143

Query: 115 VATHLEVLELEYQPEAAG 132
               + V+ +   P A G
Sbjct: 144 T-YQVTVMAIS--PHAPG 158


>UniRef50_B3DVF3 Transcription elongation factor GreA fused to uncharacterized
           associated domain n=1 Tax=Methylacidiphilum infernorum
           V4 RepID=B3DVF3_METI4
          Length = 614

 Score =  105 bits (263), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 46/135 (34%), Gaps = 11/135 (8%)

Query: 3   RPTIIINDLD---AERIDILLEQPAYAGLPIAD--------ALNAELDRAQMCSPEEMPH 51
           R  I  N  D   A     L E   Y                L + + RA+      +  
Sbjct: 472 RKKIPENSKDIAHARSYGDLRENHEYKAAKEMQVVLMRRKAELESMISRARATDFSNVDT 531

Query: 52  DVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWEL 111
             V + + V + +L         ++       S   +S +A  G +LLG + GD +   L
Sbjct: 532 TTVNIGTVVSYTDLKTNRTNSVAILGAWDSNPSKGIISYLAAFGQSLLGHKTGDVLQVSL 591

Query: 112 PGGVATHLEVLELEY 126
             G+ T + + ++  
Sbjct: 592 EDGITTEIRIDKISR 606


>UniRef50_B3PM73 Transcription elongation factor greA n=1 Tax=Mycoplasma arthritidis
           158L3-1 RepID=GREA_MYCA5
          Length = 159

 Score =  105 bits (263), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 49/133 (36%), Gaps = 11/133 (8%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPH- 51
           + RP +I    +A     L E   Y                +   LD  ++   +     
Sbjct: 28  VLRPQVIEEIKEARNQGDLSENAEYDAARDKQATIENEITEIQHILDNYEIIKTQTNRQV 87

Query: 52  DVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWEL 111
            VV + S V   +L D  V    +V        N ++S  +P+  A++G + G+ +  E 
Sbjct: 88  SVVRIGSNVSVVSLKDDTVINFQIVGALDTDPFNGKISNTSPLAKAVIGRKAGEVVEVEA 147

Query: 112 PGGVATHLEVLEL 124
           P      ++++ +
Sbjct: 148 PN--KYQVKIVHV 158


>UniRef50_A9BFC0 Transcription elongation factor greA n=12 Tax=Thermotogaceae
           RepID=GREA_PETMO
          Length = 159

 Score =  105 bits (263), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 53/130 (40%), Gaps = 9/130 (6%)

Query: 5   TIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPE-EMPHDVVT 55
            +     +A  +  L E   Y                ++  LD A++        +  V+
Sbjct: 30  EVAERIKEARELGDLSENSEYEEAKNEQGMIDSRIKEIDYILDNAEIIENGGNHDNSTVS 89

Query: 56  MNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGV 115
           +  +VK ++      +   LV P +      ++S+ +P+G +LLG + G+ I+ +   G 
Sbjct: 90  LGKKVKIKDYRLNREQEFVLVTPQEANIEENKISIESPIGRSLLGRKKGEVINIKTARGS 149

Query: 116 ATHLEVLELE 125
           +  +E+ E+ 
Sbjct: 150 SKKIEIKEIS 159


>UniRef50_C7PP41 Transcription elongation factor n=1 Tax=Chitinophaga pinensis DSM
           2588 RepID=C7PP41_CHIPD
          Length = 157

 Score =  105 bits (263), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 22/116 (18%), Positives = 44/116 (37%), Gaps = 9/116 (7%)

Query: 17  DILLEQPAYAGLPIADA--------LNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDG 68
             L E   Y     A          L + +  A++   + +    V++  +V   N+++ 
Sbjct: 41  GDLKENAEYDAAKEAQGMHEAKVAILESAIATARIVEADSIDTSKVSILCKVTITNMANK 100

Query: 69  EVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
           +     LV   +      ++SV +P+G  LLG  VG+      P G     ++  +
Sbjct: 101 KTVTYQLVSEKEADLKLNKISVTSPIGKGLLGKAVGEIADVHAPNGS-LKFKIENI 155


>UniRef50_B0T793 GreA/GreB family elongation factor n=1 Tax=Caulobacter sp. K31
           RepID=B0T793_CAUSK
          Length = 141

 Score =  105 bits (263), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 36/122 (29%), Positives = 63/122 (51%), Gaps = 1/122 (0%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKF 62
           +PTI + + D E +  L +            L  E+ RA +  P + P   V + SR+ +
Sbjct: 19  QPTIYVTEQDFEILSNLAD-APAGRAFGGRVLAHEMARALIVEPGQAPLPFVRIGSRIDY 77

Query: 63  RNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVL 122
           R+LS+G+ R   L  P   +  + ++SV++PVGAAL+G+  G + HW    G    ++V+
Sbjct: 78  RDLSNGQTRSVRLSLPRDASIDDNRISVLSPVGAALVGMTAGQAFHWTDAEGRPRGVQVI 137

Query: 123 EL 124
            +
Sbjct: 138 AV 139


>UniRef50_B7CAB2 Transcription elongation factor n=5 Tax=Erysipelotrichaceae
           RepID=B7CAB2_9FIRM
          Length = 162

 Score =  105 bits (263), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 52/136 (38%), Gaps = 14/136 (10%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPE-----EM 49
           R  +I+   +A     L E   Y                L A +  A++ +       + 
Sbjct: 28  RQEVIVELQEARAQGDLSENADYDAAREHQAQVEGRIRELEAMIKNAEIITESADVEDKK 87

Query: 50  PHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHW 109
             +VV + S VK  +LSD +     +V   +    N +LS   P+   ++  +VGD    
Sbjct: 88  KKNVVKLGSTVKILDLSDNQEVTFNIVGTIEADPFNGKLSNTTPLAEVIMDHKVGDVCTV 147

Query: 110 ELPGGVATHLEVLELE 125
           +        +++LE++
Sbjct: 148 K-RVEEPYDVKILEIK 162


>UniRef50_C0A6F4 GreA/GreB family elongation factor n=1 Tax=Opitutaceae bacterium
           TAV2 RepID=C0A6F4_9BACT
          Length = 148

 Score =  105 bits (263), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 64/134 (47%), Gaps = 8/134 (5%)

Query: 2   SRPTIIINDLDA----ERIDILLEQPAYAGLPIADALNAELDRAQMC-SPEEMPHDVVTM 56
            +  I I+  D      R++++ E            L AE DRA +      MP  VVT+
Sbjct: 3   EQQPIYISRADLLQIRARLNLIAEGR--HDRENLARLRAEFDRALIIEDDTAMPDGVVTL 60

Query: 57  NSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVA 116
           +  V+ ++L   E+   TL  P        ++S++AP+G ALLG +V + + WE+PGG  
Sbjct: 61  HCEVRLQDLDTNEIETYTLTLPEHADPEAHRISILAPIGTALLGYQVDNVVTWEMPGGA- 119

Query: 117 THLEVLELEYQPEA 130
             L +LE   QP  
Sbjct: 120 RRLRILEARRQPRP 133


>UniRef50_D0KZQ0 Transcription elongation factor GreB n=1 Tax=Halothiobacillus
           neapolitanus c2 RepID=D0KZQ0_HALNC
          Length = 175

 Score =  105 bits (263), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 25/141 (17%), Positives = 49/141 (34%), Gaps = 13/141 (9%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMPHD 52
           + R  ++    +A  +    E   Y                L   L   ++        +
Sbjct: 24  VERRLVVQAVSEAAALGDRSENAEYIYGKRRLREIDRRIRYLQKRLGDIKVVRQPPTDMN 83

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V   +R+      D   +   LV P ++  +N  +S+ +P+  A+LG  +   +   LP
Sbjct: 84  KVYFGARITLLYADD-REQTVCLVGPDEIDPANQLISIDSPLAKAVLGKALDAEVVLFLP 142

Query: 113 GG----VATHLEVLELEYQPE 129
                    H E++ +EY  E
Sbjct: 143 SETSTPRRVHAEIIAIEYPSE 163


>UniRef50_B0P8A6 Transcription elongation factor n=1 Tax=Anaerotruncus colihominis
           DSM 17241 RepID=B0P8A6_9FIRM
          Length = 151

 Score =  105 bits (263), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 31/132 (23%), Positives = 54/132 (40%), Gaps = 9/132 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHD 52
           ++R  I      A     L E   Y                L  +L   ++   +++  D
Sbjct: 19  VTRGEISEKIRVARGFGDLSENSEYDEAKNEQAVVEARIKKLEDQLKHVKIIERDQISTD 78

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
           VV++ SRVK  ++   E  V T+    +  +    +S  +PVG  L+G +VGD +    P
Sbjct: 79  VVSVGSRVKILDMDYDEEMVYTIASSVESHNDLESISDESPVGKGLIGHKVGDVVEIHAP 138

Query: 113 GGVATHLEVLEL 124
                 L++LE+
Sbjct: 139 A-AVLKLKILEI 149


>UniRef50_C8W826 Transcription elongation factor n=7 Tax=Coriobacteriaceae
           RepID=C8W826_ATOPD
          Length = 159

 Score =  105 bits (262), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 21/130 (16%), Positives = 44/130 (33%), Gaps = 9/130 (6%)

Query: 5   TIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHDVVTM 56
            I+    +A     L E   Y              + +   L  A++          V +
Sbjct: 31  EIVERIKEARGFGDLSENSEYDAAKEEQSHNESRINEIRQILSVAKVVEGGSKRKVTVAI 90

Query: 57  NSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVA 116
            + V+  +   G+     +V   +      ++S  +P G AL+G + GD + +  P G  
Sbjct: 91  GTTVELADAK-GKTTKYVIVGTTETNSLEHKISNESPAGEALIGHKKGDEVEFTTPNGKV 149

Query: 117 THLEVLELEY 126
               ++ +  
Sbjct: 150 KKYTIISITR 159


>UniRef50_Q930S2 Putative uncharacterized protein n=1 Tax=Sinorhizobium meliloti
           RepID=Q930S2_RHIME
          Length = 140

 Score =  105 bits (262), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 39/116 (33%), Positives = 57/116 (49%), Gaps = 1/116 (0%)

Query: 12  DAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVR 71
           D   +  L  Q       IA  L  +L+R  +   +++P DVV + S V    + DG  R
Sbjct: 19  DYRLLSRLAYQALSRDFDIAAELIEKLERPCVLPDDQVPPDVVKIGSIVTCE-VEDGPCR 77

Query: 72  VRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQ 127
             +LVYP  +     ++SV+ PVG ALLGLR G ++ W    G   HL V+ +E  
Sbjct: 78  TFSLVYPDDVDAEKGRISVLTPVGVALLGLRPGQAVEWFSRDGQRNHLIVVRVEDD 133


>UniRef50_B0VIH5 Putative transcription elongation factor n=1 Tax=Candidatus
           Cloacamonas acidaminovorans RepID=B0VIH5_9BACT
          Length = 159

 Score =  105 bits (262), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 29/136 (21%), Positives = 53/136 (38%), Gaps = 13/136 (9%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHDV 53
            RP +I     A     L E   Y              D L       ++    E P D+
Sbjct: 25  ERPEVIKAVAIAREFGDLSENAEYKAARERQRAIDNEIDYLRRRSANLKVIDTSEFPKDM 84

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSN----TQLSVMAPVGAALLGLRVGDSIHW 109
           V   +     +++  E     LV P ++   N     ++S+++P+G ALL  ++G+    
Sbjct: 85  VRFGTYCVAEDINTKECICYHLVGPEELNYYNEEGIQEVSIVSPIGKALLSKKIGEIAIV 144

Query: 110 ELPGGVATHLEVLELE 125
           + P G    L++ E++
Sbjct: 145 KAPIGE-RKLKIREIK 159


>UniRef50_Q0BZP7 Regulatory protein n=1 Tax=Hyphomonas neptunium ATCC 15444
           RepID=Q0BZP7_HYPNA
          Length = 128

 Score =  105 bits (262), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 45/126 (35%), Positives = 69/126 (54%), Gaps = 2/126 (1%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           ++RP I + D + ER+  L         P AD L  EL RA++ + E++P DVV M+ RV
Sbjct: 4   ITRPPIYVTDAELERLSDLA-HAVQGREPAADMLIEELSRARVTAVEDVPVDVVRMHDRV 62

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
            F           TLVYP +   ++ ++S++  VGA L+GL+VGD++ W    G    +E
Sbjct: 63  NFVY-DGARYEDFTLVYPYEANIADKRISILTQVGAMLIGLQVGDAMQWAGRDGRGHSME 121

Query: 121 VLELEY 126
           VLE+  
Sbjct: 122 VLEVSR 127


>UniRef50_Q04UP0 Transcription elongation factor n=6 Tax=Leptospira
           RepID=Q04UP0_LEPBJ
          Length = 927

 Score =  104 bits (261), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 30/134 (22%), Positives = 50/134 (37%), Gaps = 9/134 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHD 52
           +  P    +  +A+    L E   Y                L AE+  A +     +  D
Sbjct: 787 VEMPENSKDIGEAQERGDLRENAEYKAAMERQVQLQAAIKRLEAEIKSAIILDLTNVKTD 846

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            + +    K +N S GEV   +++           +S  +P+  +LLG +VGD+    L 
Sbjct: 847 KINIGVTAKLKNESTGEVVAYSILGAWDADTEKHIISYQSPLAKSLLGKKVGDAAVLNL- 905

Query: 113 GGVATHLEVLELEY 126
            G  T   VLE+  
Sbjct: 906 TGAETRYTVLEIGR 919


>UniRef50_C1ZBG3 Transcription elongation factor n=1 Tax=Planctomyces limnophilus
           DSM 3776 RepID=C1ZBG3_PLALI
          Length = 160

 Score =  104 bits (261), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 28/119 (23%), Positives = 52/119 (43%), Gaps = 11/119 (9%)

Query: 17  DILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDG 68
             L E   Y G            ++L ++L    +     +P  VV   +RV  +N  DG
Sbjct: 40  GDLKENAEYHGQREEQGRLQARINSLKSKLASCYIVDKSTLPKGVVAFGTRVTVKNTDDG 99

Query: 69  EVRVRTLVYPAKMTDSNT--QLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
           ++     V P +    +   ++   +P+ +ALLG +V D +  ++P G   + E+ E+E
Sbjct: 100 DIEKYEFVGPGEEDYMSDVMKILTTSPLASALLGKKVNDKVSIQVPRGTI-NYEITEIE 157


>UniRef50_A7HAZ2 GreA/GreB family elongation factor n=5 Tax=Myxococcaceae
           RepID=A7HAZ2_ANADF
          Length = 138

 Score =  104 bits (261), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 50/122 (40%), Positives = 68/122 (55%), Gaps = 3/122 (2%)

Query: 3   RPTIIINDLDAERIDILLE-QPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
           R  I +   D +R+  L++   A      A+ L+AELDRA        P D+VTMN+RV 
Sbjct: 4   RKPIHVTHADLDRLRALVDQHLAGRDARAAEQLDAELDRAVPIEVA--PPDLVTMNARVA 61

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           F +L+ G  R   LVYP     +  ++SV+AP+GAALLGL VG+ I W LP G    L +
Sbjct: 62  FVDLASGVRRELVLVYPRDADVAAGRVSVLAPIGAALLGLSVGEEIDWPLPDGRVARLRI 121

Query: 122 LE 123
           L 
Sbjct: 122 LS 123


>UniRef50_UPI00017427C8 transcription elongation factor GreA n=1 Tax=candidate division TM7
           single-cell isolate TM7a RepID=UPI00017427C8
          Length = 151

 Score =  104 bits (261), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 26/132 (19%), Positives = 49/132 (37%), Gaps = 13/132 (9%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHDV 53
            R  I     +A     L E   Y                +   L  A + +        
Sbjct: 25  RRGEIAEKIAEARDYGDLSENAEYDAAREEQGIVETRIAEIENILQNAAIITGGV--SGQ 82

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           V + S V+   ++  +  V T+V P +      ++S  +P+GAAL+G +V D +    P 
Sbjct: 83  VGLGSVVEL--MTGSKTAVYTVVGPVEADPLEGKVSNESPIGAALMGKKVDDIVEINTPK 140

Query: 114 GVATHLEVLELE 125
           G     +++ ++
Sbjct: 141 GK-LEYKIISIK 151


>UniRef50_Q5SKM1 Transcription elongation factor n=5 Tax=Thermus RepID=Q5SKM1_THET8
          Length = 155

 Score =  104 bits (261), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 47/133 (35%), Gaps = 12/133 (9%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHD 52
           + R  I  +   A     L E   Y                L   L RA +        D
Sbjct: 25  VKRQEISADFEQALEEGDLRENAGYDEARRAMWQNEARIAQLEDLLSRAVIVENGSF--D 82

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V +  +V+      GE     +V   +    + ++S  +P+G ALLG +VGD +     
Sbjct: 83  QVALGCQVELE-TETGERLSLAIVGSHEADIFSGKISDESPLGQALLGKKVGDVVEIRGK 141

Query: 113 GGVATHLEVLELE 125
            G      +LE++
Sbjct: 142 KGAQV-YTILEIK 153


>UniRef50_B9L0L0 Transcription elongation factor greA n=1 Tax=Thermomicrobium roseum
           DSM 5159 RepID=GREA_THERP
          Length = 156

 Score =  104 bits (260), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 34/133 (25%), Positives = 53/133 (39%), Gaps = 12/133 (9%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCS-PEEMPHD 52
            RP I     +A     + E  AY                +   L R ++   P +    
Sbjct: 27  RRPEIARVIQEAREHGDIRENAAYDAAKHDQAFIEGRIREIEELLKRVELIEQPTDGDRS 86

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
           VV + S V      DGE+   T+V   +   S  ++S  +PVG ALLG R G+ +  E P
Sbjct: 87  VVRVGSTVTIEI--DGEIETYTIVGAIEAKPSAGRISNESPVGRALLGHRAGEIVPIETP 144

Query: 113 GGVATHLEVLELE 125
            G      ++E++
Sbjct: 145 NGTLMA-RIIEVQ 156


>UniRef50_C6WVB7 GreA/GreB family elongation factor n=2 Tax=Methylophilaceae
           RepID=C6WVB7_METML
          Length = 168

 Score =  104 bits (260), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 26/108 (24%), Positives = 51/108 (47%), Gaps = 2/108 (1%)

Query: 20  LEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPA 79
            +            + A LD A +  P +  H+ V   + ++  +   G      +V   
Sbjct: 62  AKDKVAEIERDLRYVRARLDSAILVDPTKQSHETVLFGATIEVED-GAGAQHTFHIVGED 120

Query: 80  KMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQ 127
           +   S  ++S ++P+  +LLG +VGD++ W+ P G   +LE+L++ YQ
Sbjct: 121 EADASINKVSWVSPLAKSLLGQKVGDTVTWQRPAG-NINLEILDIHYQ 167


>UniRef50_D2RL35 GreA/GreB family elongation factor n=3 Tax=Veillonellaceae
           RepID=D2RL35_ACIFE
          Length = 172

 Score =  104 bits (259), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 50/136 (36%), Gaps = 11/136 (8%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADA--------LNAELDRAQMCSPEEMPHDV 53
            R  +      A     + E   Y       A        L   +  AQ+    ++  +V
Sbjct: 26  KRQQVAERLKVAISYGDISENSEYDDAKNEQAFVEGRILTLENMIRNAQIIKDTDITKNV 85

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNT--QLSVMAPVGAALLGLRVGDSIHWEL 111
           V++  +VK  ++   +    T+V   +        ++S  +PVG A+LG +VG  +    
Sbjct: 86  VSLGCKVKIEDMETHDQEEYTVVGTTEADPMAEPPRISNESPVGKAILGQKVGAVVKVTT 145

Query: 112 PGGVATHLEVLELEYQ 127
           P G     +++ +   
Sbjct: 146 PIGE-LDYKIVAVSRP 160


>UniRef50_A4E9C2 Transcription elongation factor n=1 Tax=Collinsella aerofaciens
           ATCC 25986 RepID=A4E9C2_9ACTN
          Length = 156

 Score =  104 bits (259), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 29/131 (22%), Positives = 48/131 (36%), Gaps = 11/131 (8%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHDVVT 55
             I+ +  +A     L E   Y                + A L  AQ+          V+
Sbjct: 29  KEIVEDIKEARAFGDLSENSEYDAAKDKQAQNAARIAEIQAILANAQV--AATTGDLTVS 86

Query: 56  MNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGV 115
           + S V   +  +GEV   TLV   +      ++S  +PVG A++G   GDS+    P G 
Sbjct: 87  IGSTVSLID-PNGEVMEVTLVGTTETNSLEHKISNESPVGHAIIGHGEGDSVEVVTPSGK 145

Query: 116 ATHLEVLELEY 126
                + ++  
Sbjct: 146 TRVYTIAKIAR 156


>UniRef50_P47524 Transcription elongation factor greA n=4 Tax=Mycoplasma
           RepID=GREA_MYCGE
          Length = 161

 Score =  104 bits (259), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 50/135 (37%), Gaps = 11/135 (8%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHD 52
           + RP II    +A     L E   Y                +   L  A++ S  +    
Sbjct: 26  VKRPEIIRLLQEARDQGDLSENADYDAAKAQQGEIETRIAEIQDILANAKLISDHQAKTK 85

Query: 53  V--VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWE 110
           V  V++ S V+  + S       T+V   +      ++S  +P+  A+ G  +GD     
Sbjct: 86  VTKVSLGSTVEIYDYSSKSNEKYTIVGTLEANPEEHKISNESPLALAIYGRLIGDECDV- 144

Query: 111 LPGGVATHLEVLELE 125
           +   V   +++L++ 
Sbjct: 145 VGIEVPYRVKILKIS 159


>UniRef50_B2S1W7 Transcription elongation factor greA n=6 Tax=Treponema
           RepID=GREA_TREPS
          Length = 162

 Score =  104 bits (259), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 52/133 (39%), Gaps = 9/133 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIAD--------ALNAELDRAQMCSPEEMPHD 52
           +  P        A  +  L E   Y                L  E++RAQ+  P  +   
Sbjct: 27  VRIPENSREIGRALELGDLRENAEYKAAREEQTRLNNMVTRLQEEIERAQVFDPTTVVAG 86

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V+  + +  +N + GE    T++ P +       +S M+P+G+ LL  + G+ + + + 
Sbjct: 87  RVSFGTVISLKNHTSGEDETYTILGPWESAPERGIISYMSPLGSNLLNRKTGEQLAFTV- 145

Query: 113 GGVATHLEVLELE 125
           G      E+L + 
Sbjct: 146 GEHEKVYEILSIS 158


>UniRef50_C7N7T1 Transcription elongation factor n=1 Tax=Slackia heliotrinireducens
           DSM 20476 RepID=C7N7T1_SLAHD
          Length = 155

 Score =  103 bits (258), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 32/133 (24%), Positives = 50/133 (37%), Gaps = 11/133 (8%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHDV 53
            R  +      A     + E   Y                +N  L  A +        + 
Sbjct: 26  KRAEVGERIKIAREFGDISENSEYDDAKNEQGMLEVRIAQINDILANATVVE-APKRSNR 84

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           VT+ S V       G  RV T+V  A+   +  ++S  +PVG+ LLG + GD +  E P 
Sbjct: 85  VTVGSTVTV--DMGGRERVFTIVGGAEANAAEGKISNDSPVGSVLLGSKKGDQLTTEGPT 142

Query: 114 GVATHLEVLELEY 126
           G    + VL +E+
Sbjct: 143 GRKIEITVLNIEH 155


>UniRef50_B1ZZX3 GreA/GreB family elongation factor n=3 Tax=Verrucomicrobia
           RepID=B1ZZX3_OPITP
          Length = 616

 Score =  103 bits (258), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 26/131 (19%), Positives = 46/131 (35%), Gaps = 9/131 (6%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLPIADA--------LNAELDRAQMCSPEEMPHDVVT 55
           P        A     L E   Y                L  +L RA++   ++   D V+
Sbjct: 481 PENSKAIAAAREHGDLRENSEYKMAKQEQQVLMAHKTNLERDLGRARISDFKDASIDQVS 540

Query: 56  MNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGV 115
           + + V+  ++ DG     T++           +S   P GAALLG + GD I+ +     
Sbjct: 541 VGTVVEVASVKDGHHTTYTVLGAWDGDPEKHFISYKTPFGAALLGKKTGDVINVKT-DAS 599

Query: 116 ATHLEVLELEY 126
                ++ +  
Sbjct: 600 DEDYAIVSIAR 610


>UniRef50_A6EMP4 Transcription elongation factor n=4 Tax=Bacteroidetes
           RepID=A6EMP4_9BACT
          Length = 139

 Score =  103 bits (257), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 36/129 (27%), Positives = 59/129 (45%), Gaps = 6/129 (4%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIAD----ALNAELDRAQMCSPEEMPHDVVTM 56
           M   ++II   +   +  +L    YA           LN EL  A +   EEMP DV+  
Sbjct: 1   MKYGSVIIEKKEYVFLKRILNISGYAADFEIQKSFKRLNEELKTAIIVDEEEMPTDVIRF 60

Query: 57  NSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVA 116
           NS+V   +  +G  +   +V PA       ++S++  +GAAL G   GD++ WE P G  
Sbjct: 61  NSQV-LISTKNGWKKEFQIVSPALKDVKADKISILTVMGAALFGYAQGDTVEWEFPTGKN 119

Query: 117 THLEVLELE 125
             + + ++ 
Sbjct: 120 L-ITIEKVA 127


>UniRef50_B4RBL2 Transcription elongation factor n=1 Tax=Phenylobacterium zucineum
           HLK1 RepID=B4RBL2_PHEZH
          Length = 143

 Score =  102 bits (256), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 39/126 (30%), Positives = 56/126 (44%), Gaps = 2/126 (1%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
           S P + + D +   +  ++        P    L  EL RA +      P DVV + S V+
Sbjct: 9   SNPRVTVLDEEYAPLADIVCGSP-RATPGLALLWNELSRATLVQAGRAPADVVRLGSAVE 67

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           + +L+  E R   LV P +      +  V   +GAALLGLR GD  HW  P G    L+V
Sbjct: 68  YTDLTRRESRRIRLVLPREARPPALE-PVSGTIGAALLGLRPGDVFHWRAPSGELRSLQV 126

Query: 122 LELEYQ 127
             +E  
Sbjct: 127 DAVEPP 132


>UniRef50_A7VBG3 Putative uncharacterized protein n=1 Tax=Clostridium sp. L2-50
           RepID=A7VBG3_9CLOT
          Length = 195

 Score =  102 bits (255), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 51/132 (38%), Gaps = 9/132 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHD 52
           + R   +    +A     L E   Y                L+  +  A++   +E   D
Sbjct: 53  VVRKEKLEAVKEARAQGDLSENFEYYAAKKDKNANEKRIRYLDRMVRTAEIIK-DESADD 111

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V +N+ V+     D E     +V   +    N  +S ++P+G ALLG +VGD +     
Sbjct: 112 EVGLNNTVRVYFEEDEEEDTYRIVTTVREDVLNGIISNISPMGKALLGHKVGDRVEVVPG 171

Query: 113 GGVATHLEVLEL 124
            G   H+ + E+
Sbjct: 172 KGDPFHIVIREI 183


>UniRef50_Q2SSM5 Transcription elongation factor greA n=6 Tax=Mollicutes
           RepID=GREA_MYCCT
          Length = 157

 Score =  102 bits (255), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 22/134 (16%), Positives = 54/134 (40%), Gaps = 10/134 (7%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEM-PH 51
           ++RP +I   ++A     L E   Y                +   ++RA++    +    
Sbjct: 25  VTRPKVIEELVEARNQGDLSENADYDAARNRQAEVEARIKEVETLINRAKVIDNSKTHST 84

Query: 52  DVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWEL 111
             V + S V+F +  D + +   +V   +    +  +S  +P+  A+LG ++GD++  + 
Sbjct: 85  GEVKIGSTVEFLSSLDHKTKEIKIVGAIEADPFSRLISNESPIAKAILGKKIGDTVEIKD 144

Query: 112 PGGVATHLEVLELE 125
                  + +  ++
Sbjct: 145 IL-KPYKITIKSIK 157


>UniRef50_B1XUH7 Transcription elongation factor GreB n=2 Tax=Polynucleobacter
           necessarius RepID=B1XUH7_POLNS
          Length = 168

 Score =  102 bits (254), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 27/138 (19%), Positives = 51/138 (36%), Gaps = 17/138 (12%)

Query: 5   TIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPE-----EMPH 51
            ++     A       E   Y                LN  L+ A +         E   
Sbjct: 29  EVVKVVHWAASNGDRSENGDYIYGKKRLREIDRRIRFLNKRLEFAIVVDNSARKSGENDA 88

Query: 52  DVVTMNSRVKF---RNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIH 108
           D V   + V +        G+    T+V   ++    + +S ++P+  AL+  R+GD + 
Sbjct: 89  DQVFFGASVTYSALEGPEAGKRTSITIVGVDEVDLDKSHVSWVSPIAKALIKSRIGDCVF 148

Query: 109 WELPGGVATHLEVLELEY 126
            + P G  T +E+L+++Y
Sbjct: 149 IQTPTG-PTEIEILDVQY 165


>UniRef50_D0WJ76 Transcription elongation factor n=1 Tax=Slackia exigua ATCC 700122
           RepID=D0WJ76_9ACTN
          Length = 161

 Score =  102 bits (254), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 32/133 (24%), Positives = 52/133 (39%), Gaps = 11/133 (8%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHDV 53
            R  +      A     + E   Y                +N  L  A +        + 
Sbjct: 32  KRAEVGERIRVAREFGDISENSEYDDAKNEQGLMEARIAQINDILSNAVLVE-APKRSNR 90

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           V + S V       G  RV T+V  A+   S+ ++S  +PVGAALLG + GD    E P 
Sbjct: 91  VNIGSTVTV--DMGGRERVFTIVGAAEADVSSGKISNESPVGAALLGGKKGDHFTAEGPT 148

Query: 114 GVATHLEVLELEY 126
           G    ++++++E+
Sbjct: 149 GRVIEMDIVKIEH 161


>UniRef50_D1CDC6 Transcription elongation factor n=1 Tax=Thermobaculum terrenum ATCC
           BAA-798 RepID=D1CDC6_THET1
          Length = 159

 Score =  102 bits (254), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 33/136 (24%), Positives = 53/136 (38%), Gaps = 14/136 (10%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHD 52
           + R  I     +A+    + E   Y                L   L  A++      P  
Sbjct: 27  VERAKISARIREAKEGGDISESGEYEDAKHSQAFLEGRIKELEKLLANAEVIDRSAQPAG 86

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNT---QLSVMAPVGAALLGLRVGDSIHW 109
            V + S+V      +G     T+V  A+         ++S  + VG+ALLG RVGDS+  
Sbjct: 87  TVGLGSKVTVE--ENGRTYTYTIVDGAEAGRGRDGEVRISSKSAVGSALLGRRVGDSVEV 144

Query: 110 ELPGGVATHLEVLELE 125
           E+P G     ++L +E
Sbjct: 145 EVPAGK-LTFKILSVE 159


>UniRef50_Q0B0N4 Transcription elongation factor greA n=6 Tax=Clostridia
           RepID=GREA_SYNWW
          Length = 159

 Score =  102 bits (254), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 57/133 (42%), Gaps = 9/133 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHD 52
           + R  +      A     + E   Y               +L   L +A++   E++  D
Sbjct: 27  VKREEVAERIKQAIAFGDITENSEYEDAKNEQAFIEGRIISLEKTLKKARLMEDEDIRTD 86

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
           VV++ SR+  + +  G     TLV   +    + ++S  +PVG A++G +V  ++  E P
Sbjct: 87  VVSLGSRITLKEMKSGREVTVTLVSSVESKLKDGKISDESPVGKAIMGKKVKSTVSVEAP 146

Query: 113 GGVATHLEVLELE 125
            G     +++++E
Sbjct: 147 AGTI-KYKIIKVE 158


>UniRef50_A6EIL5 Nucleoside diphosphate kinase regulator protein, putative n=1
           Tax=Pedobacter sp. BAL39 RepID=A6EIL5_9SPHI
          Length = 129

 Score =  102 bits (254), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 35/121 (28%), Positives = 62/121 (51%), Gaps = 3/121 (2%)

Query: 5   TIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRN 64
            ++I   D + +     +          +L+AEL RA + S EE P D + +NS V+ ++
Sbjct: 8   QVVITADDYQLLKPYFTKTNPHA--GEMSLSAELSRAVILSNEEFPSDAIRLNSTVRIQD 65

Query: 65  LSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
            S GE+    +V P        ++SV+ P+ AAL+G R GD++ W++P G   +  + E+
Sbjct: 66  ESTGEIMELIIVLPQHANIKEKKISVLTPIAAALIGFRQGDAVQWKVPAG-LKNFRITEV 124

Query: 125 E 125
            
Sbjct: 125 A 125


>UniRef50_D1C6T4 Transcription elongation factor n=1 Tax=Sphaerobacter thermophilus
           DSM 20745 RepID=D1C6T4_SPHTD
          Length = 157

 Score =  102 bits (254), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 45/133 (33%), Gaps = 12/133 (9%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEM-PHD 52
            R  I      A     L E   Y                +   L RA++          
Sbjct: 27  RRVEIAQALQAAREEGDLRENAGYDAAKHDQAFIEGRIREIEDILRRAEVIDEAPNGDAR 86

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
           VV + S V      DG     T+V   +   +  ++S  +P G ALLG R G+ +  + P
Sbjct: 87  VVRLGSTVTIEI--DGAQETYTIVGAVEAKPAAGRISNESPFGRALLGHREGEEVEIQTP 144

Query: 113 GGVATHLEVLELE 125
                H  ++ +E
Sbjct: 145 A-AVLHARIVNVE 156


>UniRef50_C4ZAT8 Transcription elongation factor GreA n=21 Tax=Firmicutes
           RepID=C4ZAT8_EUBR3
          Length = 167

 Score =  101 bits (253), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 48/133 (36%), Gaps = 9/133 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHD 52
           + R   + +   A     L E   Y                L   +  A +   +E   D
Sbjct: 23  VVRKKALDDVKVARAQGDLSENFEYKAAKQFKNQNESRIRYLEKMIKTAVVI-SDESKDD 81

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V M + V      D E     +V   +       +S  +P+GAA+ G +VGD    ++ 
Sbjct: 82  EVGMFNTVDVYFEDDDETETYKIVTTVRGNSLKNLISKESPLGAAIFGHKVGDRCEVKVN 141

Query: 113 GGVATHLEVLELE 125
              +  +++++++
Sbjct: 142 DDYSYFVKIMKIQ 154


>UniRef50_Q5QX12 Transcription elongation factor family protein n=1 Tax=Idiomarina
           loihiensis RepID=Q5QX12_IDILO
          Length = 129

 Score =  101 bits (253), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 44/125 (35%), Positives = 68/125 (54%), Gaps = 4/125 (3%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPI-ADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           +RP I+I+ +D   I+  L+           D L  EL RA++  P  MP +V  +N +V
Sbjct: 7   TRPNIVISCVDMAVIEHHLD--ETRLPREFLDELEVELARAKIVEPNVMPANVACLNRQV 64

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
            F+ L  G+V  +TL  P ++   +  LSV AP+GAAL+GL VG SI W+   G    +E
Sbjct: 65  TFKVLETGKVFTKTLTAPDQVDKYDDSLSVFAPLGAALIGLSVGQSIQWKTNRG-LQSVE 123

Query: 121 VLELE 125
           ++ + 
Sbjct: 124 IVHVA 128


>UniRef50_A0LES5 GreA/GreB family elongation factor n=1 Tax=Syntrophobacter
           fumaroxidans MPOB RepID=A0LES5_SYNFM
          Length = 155

 Score =  101 bits (252), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 50/132 (37%), Gaps = 9/132 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHD 52
           + RP +I    +A    I +E   Y                L  +L   ++    +    
Sbjct: 23  VVRPEVIEELQEARTGGIKIENQQYMLARERHMVLQKKIQDLERKLASCEIVVGRKFFFK 82

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
                + V  +N+  GE +   LV P +    + +LS+ +PVG  L+G R G+ +    P
Sbjct: 83  QAEFGTIVVIQNIETGETQRYQLVGPYESNVVDGKLSIDSPVGRHLVGRREGEEVLVYTP 142

Query: 113 GGVATHLEVLEL 124
            G      V+ +
Sbjct: 143 AG-VRMYRVVSI 153


>UniRef50_A7HXN2 GreA/GreB family elongation factor n=1 Tax=Parvibaculum
           lavamentivorans DS-1 RepID=A7HXN2_PARL1
          Length = 133

 Score =  101 bits (252), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 41/122 (33%), Positives = 65/122 (53%), Gaps = 1/122 (0%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFR 63
           P I++ +   + +  + E        +A  L+ EL+RA++     +P DVV +NS V+F 
Sbjct: 10  PQIVVAEEQFDALSDIAEGLTGVLPHVAGFLDRELNRARLLPLAHVPSDVVKVNSTVEFT 69

Query: 64  NLSDGEV-RVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVL 122
             + GE      L +PA+ T  +  +S+ +PVG ALLGLR G SI W    G    L+VL
Sbjct: 70  LDTRGERVERLKLAFPAESTAGDGYVSIASPVGVALLGLREGQSIEWTSRYGERRSLKVL 129

Query: 123 EL 124
           ++
Sbjct: 130 KV 131


>UniRef50_B9XT30 GreA/GreB family elongation factor n=1 Tax=bacterium Ellin514
           RepID=B9XT30_9BACT
          Length = 606

 Score =  101 bits (252), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 45/129 (34%), Gaps = 9/129 (6%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLPIAD--------ALNAELDRAQMCSPEEMPHDVVT 55
           P        A     L E   Y                L +EL RA+         D V+
Sbjct: 473 PANSKEIAIARSYGDLRENHEYKAAKEMQKILMRRKAELESELVRARGTDYLNPKTDAVS 532

Query: 56  MNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGV 115
           + + VK  +L+   +    ++           +S +AP+  +LL  + G+ + +E+  G 
Sbjct: 533 IGTIVKVTDLNSSHIEHFNILGAWDSDPEKNVISYLAPLAQSLLNRKPGEEVDYEM-DGQ 591

Query: 116 ATHLEVLEL 124
                + E+
Sbjct: 592 KRRFRIDEI 600


>UniRef50_UPI0001746370 transcript cleavage factor/unknown domain fusion protein n=1
           Tax=Verrucomicrobium spinosum DSM 4136
           RepID=UPI0001746370
          Length = 627

 Score =  100 bits (251), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 52/142 (36%), Gaps = 11/142 (7%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADAL--------NAELDRAQMCSPEEMPHD 52
           +  P    +   A     L E   Y       A+          EL RA+      +  +
Sbjct: 482 VKIPQNKKDIQIAREYGDLRENFEYKSARQHQAVLLRMQSTYERELRRARGTDFVGVSTE 541

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V + + V  +++  G+   +T++         + LS ++ +  AL+G RVGD       
Sbjct: 542 TVGIGTIVDLQDVGTGKTETQTILGAWDGDPDQSILSYLSEMAKALIGKRVGDEAELPTD 601

Query: 113 GGVATHLEVLELEY---QPEAA 131
                 ++++ +     Q EAA
Sbjct: 602 THGTRKVKIVSIRPYRTQAEAA 623


>UniRef50_D2PP26 Transcription elongation factor GreA n=3 Tax=Actinomycetales
           RepID=D2PP26_9ACTO
          Length = 169

 Score =  100 bits (250), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 44/135 (32%), Gaps = 13/135 (9%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHDVV 54
           R  I     +A     L E   Y                L   L RA++         VV
Sbjct: 32  RAEITQRISEARDEGDLKENGGYHAAKDEQGKIEARIRQLEDMLRRARV-GETPKDDGVV 90

Query: 55  TMNSRVKFRNLSDGEVRVRTLVYPA----KMTDSNTQLSVMAPVGAALLGLRVGDSIHWE 110
               +V      D +V    L          +      S  +P+GAA++G + GD   +E
Sbjct: 91  EPGMKVSITFAGDDDVETFLLGSRELLALDTSVDIDVYSPQSPLGAAIMGKKKGDKATYE 150

Query: 111 LPGGVATHLEVLELE 125
            P G    +E++  E
Sbjct: 151 APNGKDVTVEIVAAE 165


>UniRef50_A5FHU8 GreA/GreB family elongation factor n=1 Tax=Flavobacterium
           johnsoniae UW101 RepID=A5FHU8_FLAJ1
          Length = 132

 Score =  100 bits (249), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 30/123 (24%), Positives = 61/123 (49%), Gaps = 2/123 (1%)

Query: 3   RPTIIINDLDAERIDILLEQPAYA-GLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
           +PT      D + +  L+ +   +     A+ L+ ELDRA +    E+   V+ +NS V 
Sbjct: 2   KPTPTFCKSDYQFLRELILKSKNSTNTKEANQLSQELDRAVISKESELDSSVIRINSLVT 61

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
             ++   +     +V P+      +++S++AP+  A++G +  D + WELP G    L++
Sbjct: 62  IEDVKANKQMKIQIVLPSYADVKQSKISILAPLSVAIIGFKENDEVDWELPAG-IKTLKI 120

Query: 122 LEL 124
           + +
Sbjct: 121 VAV 123


>UniRef50_B9XEY1 GreA/GreB family elongation factor n=1 Tax=bacterium Ellin514
           RepID=B9XEY1_9BACT
          Length = 170

 Score = 99.4 bits (247), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 24/97 (24%), Positives = 44/97 (45%), Gaps = 2/97 (2%)

Query: 31  ADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSV 90
              L   L  A++  P   P + V   + V  R+ S  E R   +V   +       +S 
Sbjct: 76  ILQLEQSLATAEIVPPPPQPWEQVRFGATVTVRDESGNETR-YRIVGVDETDIDRDWVSW 134

Query: 91  MAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQ 127
           ++P+  AL+  R+G+ +H+  P G    LE++ + Y+
Sbjct: 135 LSPIARALINARIGERVHFRFPAGEKQ-LEIVSITYE 170


>UniRef50_C8S319 GreA/GreB family elongation factor n=1 Tax=Rhodobacter sp. SW2
           RepID=C8S319_9RHOB
          Length = 167

 Score = 99.4 bits (247), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 34/115 (29%), Positives = 51/115 (44%), Gaps = 3/115 (2%)

Query: 17  DILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLV 76
           + L + P  A       L A L  A    P   P   V   +RV+   L+DG  +V  + 
Sbjct: 55  ERLDKLPEAAAERDIRYLEARLRSAIPVDPSSQPAGEVAFGARVEVA-LADGSRQVWQIT 113

Query: 77  YPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEY-QPEA 130
              +   +  +++  +P+  ALLG  VGD + W  P G    LEVL + Y  P+A
Sbjct: 114 GEDEADATQNRIAPQSPLARALLGAEVGDLVIWRKPSG-PVELEVLAIAYADPQA 167


>UniRef50_Q88ZS9 Transcription elongation factor greA 1 n=7 Tax=Lactobacillus
           RepID=GREA1_LACPL
          Length = 156

 Score = 98.6 bits (245), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 46/132 (34%), Gaps = 11/132 (8%)

Query: 3   RPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMPHDVV 54
           RP  I     A  +    E   Y                LN +L  AQ+  P    +D +
Sbjct: 27  RPERIRILAAAAALGDRSENAEYSSAKRDLGRLESRLRYLNKQLQYAQIVQPA--DNDQL 84

Query: 55  TMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGG 114
            +   V    L D +     LV   +      ++S  +P+G AL    V D +    P G
Sbjct: 85  DIGKFVTIEFLDDHDQITYQLVGKQEANLEQQKISFTSPIGQALANHTVDDVVTVNAPNG 144

Query: 115 VATHLEVLELEY 126
               ++V+ ++ 
Sbjct: 145 A-YQVKVIAVKR 155


>UniRef50_B9KZF4 Transcription elongation factor greA n=2 Tax=Thermomicrobia (class)
           RepID=B9KZF4_THERP
          Length = 156

 Score = 98.6 bits (245), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 33/130 (25%), Positives = 51/130 (39%), Gaps = 11/130 (8%)

Query: 4   PTIIINDLDAERIDILLEQPAYAG--------LPIADALNAELDRAQMCSPEEMPHDVVT 55
           P ++           + +   Y                +   L RAQM      P D V 
Sbjct: 30  PLLLERLQQLSNEGDISDNSEYEDTKEELVLTEARIREIEHILRRAQMI-TRAGPQDEVR 88

Query: 56  MNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGV 115
           + SRV   +   G V    +V P +   +  ++S+ +PVGAALLG RVG ++    PGG 
Sbjct: 89  LGSRVTVIDEE-GSVETWVIVSPEEANAAQGRISIESPVGAALLGKRVGTTVTVRAPGGE 147

Query: 116 ATHLEVLELE 125
                +  +E
Sbjct: 148 -MRFTIQRIE 156


>UniRef50_B4W8F1 Putative uncharacterized protein n=1 Tax=Brevundimonas sp. BAL3
           RepID=B4W8F1_9CAUL
          Length = 141

 Score = 98.6 bits (245), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 2/132 (1%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
           SRP I ++  D + +  L+         +A  L  EL+RA +C P + P     ++  + 
Sbjct: 12  SRPDIFLSARDHQTLSRLV--GDMPAEGVAGLLQEELERAVICEPGDRPRGAAPLHRWLH 69

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           + +    + R   +V P +      ++SV++ VGA L+GL  G +I W  P G    L  
Sbjct: 70  YVDGRSPQPRRIQIVLPNEADIDAGKVSVLSYVGAGLIGLVEGHTIAWTDPSGADRRLTP 129

Query: 122 LELEYQPEAAGD 133
           + +E      GD
Sbjct: 130 VMIEDPETPGGD 141


>UniRef50_C6X3W9 Transcription elongation factor GreB n=1 Tax=Flavobacteriaceae
           bacterium 3519-10 RepID=C6X3W9_FLAB3
          Length = 183

 Score = 98.6 bits (245), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 41/104 (39%), Gaps = 1/104 (0%)

Query: 23  PAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMT 82
                      LN  +  A++     +    V   + V F+NL++   +   LV   +  
Sbjct: 81  AFNHLNARLQLLNGRMASAKIIDTARLSQGEVHFGATVTFKNLNNNLRQTFQLVGVDEAN 140

Query: 83  DSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
            S  +L+   P+  AL+  +VG+ +  +L        E+L + Y
Sbjct: 141 ISKGKLAFTTPLAKALINSKVGEKVTLQLGD-KTNIFEILSIGY 183


>UniRef50_A3HZU2 Transcription elongation factor GreB n=2 Tax=Bacteroidetes
           RepID=A3HZU2_9SPHI
          Length = 166

 Score = 98.6 bits (245), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 44/113 (38%), Gaps = 1/113 (0%)

Query: 14  ERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVR 73
              +      +         L+  +  A++    E P + +   ++V  +     +    
Sbjct: 55  AATEQEKRIASNFISAKIKLLDERIATAKIVDLSEQPKNEIRFGAKVTLKIGKSPKAMTY 114

Query: 74  TLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
            LV   +   S  ++S ++P+   L+G +VG+     L  G     EV+E++Y
Sbjct: 115 QLVGVDEADISKNKISFISPIAMILIGKKVGEKATLSLTKG-DRVFEVMEIKY 166


>UniRef50_C0JZV3 Transcription elongation factor GreA n=1 Tax=uncultured bacterium
           URE4 RepID=C0JZV3_9BACT
          Length = 112

 Score = 98.3 bits (244), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 20/95 (21%), Positives = 43/95 (45%), Gaps = 1/95 (1%)

Query: 31  ADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSV 90
              L  ++  A++    ++  D V + S+V   N++        +V  ++   S   LS 
Sbjct: 18  IARLKEKVANARVIDESKLSADTVQLLSKVTVENMNAKMKMQFQIVGESEADFSKGLLSA 77

Query: 91  MAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
             P+G AL+G   G+ +  ++P G     ++L++ 
Sbjct: 78  STPIGKALMGHGKGEVVEAKVPSG-IMKFKILDIS 111


>UniRef50_A3PS97 GreA/GreB family elongation factor n=4 Tax=Rhodobacter sphaeroides
           RepID=A3PS97_RHOS1
          Length = 137

 Score = 97.9 bits (243), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 40/129 (31%), Positives = 61/129 (47%), Gaps = 2/129 (1%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
           SRP I +  ++  R+D L          +A  L  +L  A++ +P  +  DVVT+ S V 
Sbjct: 8   SRPAIDMTLIE--RLDTLAGAAIARLPDVAYPLITKLTSARLLAPARLSSDVVTIGSEVL 65

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           + +      R  TL +P     S   +S++ PVG ALLGL  GD   W+   G    L V
Sbjct: 66  YHDDQGARDRRVTLSWPEDADISRRSVSILTPVGVALLGLSAGDRFQWQTRAGERRSLTV 125

Query: 122 LELEYQPEA 130
           L++  +P  
Sbjct: 126 LQVGSEPRP 134


>UniRef50_UPI0000E87FB5 transcription elongation factor GreB n=1 Tax=Methylophilales
           bacterium HTCC2181 RepID=UPI0000E87FB5
          Length = 144

 Score = 97.1 bits (241), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 22/133 (16%), Positives = 43/133 (32%), Gaps = 10/133 (7%)

Query: 3   RPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEE-MPHDV 53
           RP  +     A       E   Y                L   ++ A +  P   +    
Sbjct: 13  RPETVKVISWAAGNGDRSENGDYIYGKKKLRQIDSRIKFLLTAIEDADIVHPSTSIDKKK 72

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           V   + VK  +          +V   ++  +   +S ++P+  AL+G    D I  + P 
Sbjct: 73  VYFGANVKLLDEQSKSTLDIRIVGAHEINHNIGNISWLSPLAKALIGRTSSDLIEVQTPM 132

Query: 114 GVATHLEVLELEY 126
                  +L+++Y
Sbjct: 133 -NIKTYIILKVDY 144


>UniRef50_A9NGN4 Transcription elongation factor greA n=7 Tax=Acholeplasmataceae
           RepID=GREA_ACHLI
          Length = 158

 Score = 97.1 bits (241), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 19/133 (14%), Positives = 46/133 (34%), Gaps = 9/133 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHD 52
           + R   +    +A     L E   Y                + + L   ++    +    
Sbjct: 27  VKRVENLEALKEAREQGDLSENADYDAARNEQARIEARILEIESILKNVKIIRTND-DST 85

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V +  +V    +   +     +V   +    N ++S+ +P+G A+ G  VGD +  +  
Sbjct: 86  TVNIGKKVLLHFVEKNKDVEYHVVGTIEADPKNFKISIESPLGRAIKGKEVGDLVQIKSA 145

Query: 113 GGVATHLEVLELE 125
               +++E+  + 
Sbjct: 146 TNKQSNVEIKAIS 158


>UniRef50_Q9Z7G4 Transcription elongation factor greA n=13 Tax=Chlamydiaceae
           RepID=GREA_CHLPN
          Length = 722

 Score = 97.1 bits (241), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 22/127 (17%), Positives = 49/127 (38%), Gaps = 14/127 (11%)

Query: 7   IINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMPHDVVTMNS 58
                DA  +  L E   Y                L+ E++RA++ + + +  D V +  
Sbjct: 594 AKEIEDARSLGDLRENSEYKFALEKRARLQEEIRVLSEEINRARILTKDLVFTDKVGVGC 653

Query: 59  RVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATH 118
           +V  +    GEV   T++ P      +  LS+ + +   +LG ++ D +  +        
Sbjct: 654 KVTLK-GDAGEVVEYTILGPWDADPDSCILSLQSKLAQNMLGKKLNDVVILQG-----KE 707

Query: 119 LEVLELE 125
            ++  ++
Sbjct: 708 YKISRIQ 714


>UniRef50_B4D3Z7 GreA/GreB family elongation factor n=1 Tax=Chthoniobacter flavus
           Ellin428 RepID=B4D3Z7_9BACT
          Length = 609

 Score = 97.1 bits (241), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 19/130 (14%), Positives = 41/130 (31%), Gaps = 9/130 (6%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGL--------PIADALNAELDRAQMCSPEEMPHDVVT 55
           P  +     A     L E   +                   +L +A+           V+
Sbjct: 477 PENVKEIQVARSYGDLRENFEFKAAKEMQRVLSRRRAETERDLAQARGTDFANPDTAQVS 536

Query: 56  MNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGV 115
           + + V  +   DG   V T++           +S  + +  AL+G + G+ ++     G 
Sbjct: 537 VGTIVTLKETGDGRTDVYTILGAWDGDPDKGIVSYQSALAQALIGHKPGEQVNVPTEHG- 595

Query: 116 ATHLEVLELE 125
                + ++E
Sbjct: 596 DRTARIEKIE 605


>UniRef50_D1R523 Putative uncharacterized protein n=1 Tax=Parachlamydia
           acanthamoebae str. Hall's coccus RepID=D1R523_9CHLA
          Length = 731

 Score = 96.3 bits (239), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 45/120 (37%), Gaps = 9/120 (7%)

Query: 9   NDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
               A  +  L E   Y                L+ +L+RA++ + +++  + V++ S V
Sbjct: 608 EIEAARSLGDLRENSEYKFALEKRSRLQGELKRLSEQLNRARIITKDDIYLNQVSVGSIV 667

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
           +  +     V   T++ P         LS  +    A+LG +VG+   +         ++
Sbjct: 668 ELEDPEKN-VVTYTILGPWDADADTNILSFQSKFAEAMLGRKVGEEFEFRNQNFTIRTIK 726


>UniRef50_A4F866 Transcription elongation factor greA n=44 Tax=Actinobacteria
           (class) RepID=GREA_SACEN
          Length = 162

 Score = 95.9 bits (238), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 44/133 (33%), Gaps = 10/133 (7%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHDV 53
           +RP I     +A     L E   Y                L   L  A++         V
Sbjct: 27  NRPVIAAKINEAREEGDLKENGGYHAAREEQGHLESRIRQLQELLRTAKVGDV-PTEAGV 85

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAK-MTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
               S +  R   + E     L    +         S  +P+G ALL  + G++  +ELP
Sbjct: 86  AKPGSVLTVRYDDEDETEKFLLATREEGAHGDLEVYSPSSPLGQALLDAKEGETREYELP 145

Query: 113 GGVATHLEVLELE 125
            G    + +++ E
Sbjct: 146 NGGTMKVTLVKAE 158


>UniRef50_B9E669 Transcription elongation factor n=5 Tax=Clostridium
           RepID=B9E669_CLOK1
          Length = 157

 Score = 95.9 bits (238), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 31/131 (23%), Positives = 47/131 (35%), Gaps = 10/131 (7%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHD 52
           + R  I      A     L E   Y+               L  +L  A +     +  D
Sbjct: 27  VKRVEIKAALKAARAQGDLSENADYSAAKEDQSMTETRIQELEYQLKNAVIIESS-LETD 85

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
           V  +N     +     EV   TLV   +    N ++S+ +P+G AL  L+VGD      P
Sbjct: 86  VFDINRTALVKFYDVDEVEEVTLVSSVESDVKNMRISIESPLGKALFRLKVGDKATVISP 145

Query: 113 GGVATHLEVLE 123
            G    +EV +
Sbjct: 146 DG-NYDVEVEK 155


>UniRef50_Q98F07 Nucleoside diphosphate kinase regulator; Rnk n=2 Tax=Mesorhizobium
           RepID=Q98F07_RHILO
          Length = 180

 Score = 95.6 bits (237), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 38/132 (28%), Positives = 60/132 (45%), Gaps = 1/132 (0%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           M      +   D   ++++LE+      PI   L  +L  A +   + +  D+VT+NSRV
Sbjct: 1   MKSTNCCLTTKDRAVLEVMLERRRAFADPIVHVLEHKLSSADVVPIDTVGPDIVTLNSRV 60

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
            F ++  G  + RTLV         + LSV    G  +LG+  G +   E   G    + 
Sbjct: 61  VF-SIDAGHAQTRTLVQNEVRGPVGSSLSVATRRGLCMLGMAQGQTASIEHADGRRESIL 119

Query: 121 VLELEYQPEAAG 132
           +  + YQPEAAG
Sbjct: 120 IKAVLYQPEAAG 131


>UniRef50_B8IHN9 GreA/GreB family elongation factor n=1 Tax=Methylobacterium
           nodulans ORS 2060 RepID=B8IHN9_METNO
          Length = 147

 Score = 95.2 bits (236), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 37/122 (30%), Positives = 63/122 (51%), Gaps = 1/122 (0%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFR 63
           P I I++ D +R+ +        G      L +EL+RA +C   E+P  VV+ N RV +R
Sbjct: 8   PPITISNYDFDRLVVYGLTAYMHGDRNVVFLFSELERATVCPAMELPDQVVSANCRVIYR 67

Query: 64  NLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHW-ELPGGVATHLEVL 122
              +  +R   LV+P  +   + ++S  +P+G ALLGL+VGD + + +   G    + V 
Sbjct: 68  IDDEPCLRAHMLVHPCDLISPDDEISAGSPLGIALLGLKVGDRMPFCDTQTGGRHVVAVE 127

Query: 123 EL 124
            +
Sbjct: 128 GV 129


>UniRef50_A9KJU6 GreA/GreB family elongation factor n=8 Tax=Clostridiales
           RepID=A9KJU6_CLOPH
          Length = 167

 Score = 95.2 bits (236), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 47/130 (36%), Gaps = 9/130 (6%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHDVV 54
           R   I    +A     L E   Y                L   +  A++   +    D +
Sbjct: 25  RKEAIDAVKEARAHGDLSENFEYYAAKKDKNKNEGRIRYLERMIKTAEVIE-DHSSEDEI 83

Query: 55  TMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGG 114
            +N+ V      D E+    L+   +       +S+ +P+G A+LG +V D ++ ++   
Sbjct: 84  GINNTVSIYFEEDNEIEKYKLITTVRENSLQGLISIESPLGKAILGHKVEDRVYVKVRDD 143

Query: 115 VATHLEVLEL 124
              ++ +  +
Sbjct: 144 YGYYVIIKAI 153


>UniRef50_C7CFG6 Putative regulator n=1 Tax=Methylobacterium extorquens DM4
           RepID=C7CFG6_METED
          Length = 149

 Score = 95.2 bits (236), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 42/122 (34%), Positives = 62/122 (50%), Gaps = 1/122 (0%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFR 63
           P I +   D +R+          G   AD L  EL RA +C P  +P +VV++N RV +R
Sbjct: 8   PPITVTTRDFDRLVAFSLDAHLRGDSHADFLLWELKRATLCPPCALPSEVVSVNCRVLYR 67

Query: 64  NLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHW-ELPGGVATHLEVL 122
              +  VRV  L +P  + +    LSV +P+G ALLGLRVGD + + +   G    + V 
Sbjct: 68  LDDEPGVRVHLLAHPDDLINLADGLSVASPLGTALLGLRVGDRMPFCDNRLGTQHVVTVE 127

Query: 123 EL 124
            +
Sbjct: 128 GI 129


>UniRef50_Q1J0L4 Transcription elongation factor n=3 Tax=Deinococcus
           RepID=Q1J0L4_DEIGD
          Length = 156

 Score = 94.8 bits (235), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 36/134 (26%), Positives = 53/134 (39%), Gaps = 12/134 (8%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHDV 53
            R  I      A     L E  AY                L  +L+RAQ+   +      
Sbjct: 27  RREQISEYMGSAIADGDLRESAAYDEARMQQSENEARILELEDQLERAQIIEEDA--SGG 84

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
             + ++VK R+   G  R   LV   ++     ++S  +P+G AL G R G  +  +LP 
Sbjct: 85  AGLGAKVKVRDEK-GNERQFELVGTYEVDVLKGKISDASPIGQALSGKRPGQIVTVQLPK 143

Query: 114 GVATHLEVLELEYQ 127
           G A   EVLE+ Y 
Sbjct: 144 GSA-KFEVLEVTYD 156


>UniRef50_Q1CX76 Transcription elongation factor, GreA/GreB family n=2
           Tax=Cystobacterineae RepID=Q1CX76_MYXXD
          Length = 167

 Score = 94.8 bits (235), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 24/95 (25%), Positives = 41/95 (43%), Gaps = 2/95 (2%)

Query: 32  DALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVM 91
             L A L+  ++  P+      V   + V+  +   G      +V P +      +LSV 
Sbjct: 72  QELAAVLEDVRVVEPDASQAGRVFFGAWVELEDEDGG-PVRYRIVGPDESDVKAGRLSVE 130

Query: 92  APVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
           +P+  ALLG  VG+S+  + P G      V  ++Y
Sbjct: 131 SPLARALLGKEVGESVVVDRPRG-PVEYTVTAVDY 164


>UniRef50_Q4K5S3 Transcription elongation factor GreB n=3 Tax=Pseudomonas
           RepID=Q4K5S3_PSEF5
          Length = 197

 Score = 94.4 bits (234), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 26/108 (24%), Positives = 45/108 (41%), Gaps = 3/108 (2%)

Query: 18  ILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVY 77
              +Q               L  AQ+ +      D V + SRV F +  D   +   LV 
Sbjct: 91  DADKQRMAELERDLRYFTQRLHSAQVVTTAN-STDKVQIGSRVTFADEQD-RQQSVQLVG 148

Query: 78  PAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
             +   +   ++  +P+G ALLG + GD + W+ P G    +E++ +E
Sbjct: 149 EDQADAAKGLINWASPLGRALLGAQPGDEVLWQRPAGNQL-IEIIRIE 195


>UniRef50_C5BTE2 Transcription elongation factor GreA n=1 Tax=Teredinibacter
           turnerae T7901 RepID=C5BTE2_TERTT
          Length = 126

 Score = 94.0 bits (233), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 20/117 (17%), Positives = 39/117 (33%), Gaps = 3/117 (2%)

Query: 8   INDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSD 67
           +       ++      +      A  L   L  A +   +++    V   S V   ++ +
Sbjct: 9   MTARWRRELEA---NLSSLPDTDAAELRTRLASATVVDNDDIMGGRVQFGSLVTVFSIDE 65

Query: 68  GEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
            E +   +V   +       L   +P+  AL G R G+ +   L  G     EV  +
Sbjct: 66  EEEQSFQIVSSDESLSGRGLLDQRSPLAQALFGAREGEVVRVLLQNGSNCDYEVTHI 122


>UniRef50_B4UMG4 GreA/GreB family elongation factor n=4 Tax=Anaeromyxobacter
           RepID=B4UMG4_ANASK
          Length = 169

 Score = 93.6 bits (232), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 33/116 (28%), Positives = 43/116 (37%), Gaps = 3/116 (2%)

Query: 12  DAERIDILLEQPA-YAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEV 70
           DA R+                 AL+A L    +  PE  P   V   + V      DG  
Sbjct: 52  DAARLPDAERPARLGELDARIAALDATLGALTVLGPEATPEGQVGFGTWVTVE-EEDGRR 110

Query: 71  RVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
               LV P +       +S  +PV  ALLG R GD +    PGG A  L V+ +  
Sbjct: 111 VTWRLVGPDEADARRGLISAGSPVARALLGRRAGDVVEVNRPGGEA-ELTVVAVRR 165


>UniRef50_UPI0001C31C12 transcription elongation factor GreA n=1 Tax=Conexibacter woesei
           DSM 14684 RepID=UPI0001C31C12
          Length = 154

 Score = 93.6 bits (232), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 49/132 (37%), Gaps = 12/132 (9%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHD 52
           ++R  I      A     L E   Y                L      A +        D
Sbjct: 25  VARREIAARIRTAREWGDLKENAEYHAAKEDQAHLETRILKLRERERNATVTEASS-DVD 83

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
           +V   S V+    + G+    TLV  A+ +  + +LS+ +PV  AL+G R G+ +  + P
Sbjct: 84  IVAFGSTVEVE--TGGKNARYTLVGAAEASARDGKLSIESPVARALIGARAGEDVQVQTP 141

Query: 113 GGVATHLEVLEL 124
            G    L V+ +
Sbjct: 142 SGA-RILRVVRV 152


>UniRef50_B4D5K0 GreA/GreB family elongation factor n=1 Tax=Chthoniobacter flavus
           Ellin428 RepID=B4D5K0_9BACT
          Length = 169

 Score = 92.9 bits (230), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 44/111 (39%), Gaps = 2/111 (1%)

Query: 17  DILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLV 76
             +             AL+  L  A++ +  E   D V     V  R+ + G      +V
Sbjct: 60  GEISRDELRRVTSRMQALSQRLADAEVIAISESRGDEVRFGMFVTIRD-AGGVEDEYRIV 118

Query: 77  YPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQ 127
              ++      +S ++P+  A++G ++GD + ++ P G    L ++ +   
Sbjct: 119 GVDEVDLEAGWISWLSPLAQAIVGRKIGDVVQFQAPAGE-KKLHIVAVRPP 168


>UniRef50_A6STV7 Transcription elongation factor GreB n=2 Tax=Oxalobacteraceae
           RepID=A6STV7_JANMA
          Length = 175

 Score = 92.9 bits (230), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 52/129 (40%), Gaps = 3/129 (2%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPE-EMPHDVVTMNSR 59
           ++RP  +  D     +    E            L   ++ A++         D +   + 
Sbjct: 47  VARPAAMQMDAADTAMASAQEASLREIEQRIHYLQTRVESAEVVDASVHADGDRIFFGAS 106

Query: 60  VKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHL 119
           V + N + GE    T+V   ++  +  ++S ++P+  +LLG   GD++  + P G    L
Sbjct: 107 VDYEN-TAGETHTATIVGLDELDPAQGRISWLSPLAQSLLGAEEGDTVLLQTPAG-PEEL 164

Query: 120 EVLELEYQP 128
            VL + Y  
Sbjct: 165 HVLTVRYPA 173


>UniRef50_A0M1N1 GreA-like transcription elongation factor n=3 Tax=Flavobacteriaceae
           RepID=A0M1N1_GRAFK
          Length = 166

 Score = 92.5 bits (229), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 57/125 (45%), Gaps = 7/125 (5%)

Query: 8   INDLDAERIDILLEQ------PAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
           + DL+ ER  +  E                + L+  L  A++   ++ P D +   +RVK
Sbjct: 43  LKDLEYERAHVEAENDTEKRRAQSLIDGKINLLSERLQTARLLDSKDQPKDEIRFGARVK 102

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
             N + G+++   +V   +      +++ +AP+  A+ G +VG+ I ++L       L+V
Sbjct: 103 LTNETSGQLQEFQIVGVDEADIKKKKIAFVAPIAKAVTGRKVGEEIDFKLGN-EIRKLKV 161

Query: 122 LELEY 126
           L + Y
Sbjct: 162 LGITY 166


>UniRef50_Q6MF39 Putative uncharacterized protein n=1 Tax=Candidatus Protochlamydia
           amoebophila UWE25 RepID=Q6MF39_PARUW
          Length = 723

 Score = 92.1 bits (228), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 23/125 (18%), Positives = 48/125 (38%), Gaps = 14/125 (11%)

Query: 9   NDLDAERIDILLEQPAYA-GLPIADALNAELD-------RAQMCSPEEMPHDVVTMNSRV 60
               A  +  L E   +         L +EL        RA++ +P+++  D V + S +
Sbjct: 600 EIEAARALGDLRENSEFKFAQERRARLQSELKTLSEQFGRARIITPDDILTDEVGIGSVI 659

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
              +   G+    +++ P         LS+ +    A++G ++GD   ++         +
Sbjct: 660 DLIDSQ-GQKIRYSILGPWDADPEKNILSLNSKFAQAMIGKKIGDQFQFK-----DETFK 713

Query: 121 VLELE 125
           VL L 
Sbjct: 714 VLSLH 718


>UniRef50_C1A2Y4 Transcription elongation factor greA n=41 Tax=Corynebacterineae
           RepID=GREA_RHOE4
          Length = 164

 Score = 92.1 bits (228), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 27/135 (20%), Positives = 45/135 (33%), Gaps = 12/135 (8%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHDV 53
           +RP I     +      L E   Y                L   L+ A++         V
Sbjct: 27  NRPVIAAEINERREEGDLKENGGYHAAREEQGQQEARIRQLQELLNSAKV-GEAPTQSGV 85

Query: 54  VTMNSRVK-FRNLSDGEVRVRTLVYPAKM--TDSNTQLSVMAPVGAALLGLRVGDSIHWE 110
               S VK + +  + +     +    +          S  +P+G ALL  +VGD+  + 
Sbjct: 86  ALPGSVVKVYYDGDESDTETFLIATREEGARDAKLEVYSPNSPLGGALLEAKVGDTREYN 145

Query: 111 LPGGVATHLEVLELE 125
           LP G    + +L  E
Sbjct: 146 LPNGSTMKVTLLSAE 160


>UniRef50_B2UNZ9 GreA/GreB family elongation factor n=1 Tax=Akkermansia muciniphila
           ATCC BAA-835 RepID=B2UNZ9_AKKM8
          Length = 615

 Score = 91.7 bits (227), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 42/134 (31%), Gaps = 9/134 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGL--------PIADALNAELDRAQMCSPEEMPHD 52
           +  P  + N   +     L E   Y                L   L  A+          
Sbjct: 479 VKIPENLHNKKISRAEGDLRENGGYQDAKEVEKVLNRRRAELEHALALARGTDFAVTDTS 538

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
              M ++V  + L+ GE  V T++           +S ++ VG  L G  VGD +     
Sbjct: 539 RAAMGTKVTLQPLNGGEPVVYTILGAWDTNPEKHIVSYLSQVGKELTGKSVGDQVKIVPM 598

Query: 113 GGVATH-LEVLELE 125
            G       + ++E
Sbjct: 599 DGDKKKVYTITKIE 612


>UniRef50_Q11G80 GreA/GreB family elongation factor n=1 Tax=Chelativorans sp. BNC1
           RepID=Q11G80_MESSB
          Length = 176

 Score = 91.3 bits (226), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 35/130 (26%), Positives = 54/130 (41%), Gaps = 1/130 (0%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKF 62
           +    +   D E +  + E+       +   L  +L+ A++  PE  P DVVT+NSR+ F
Sbjct: 4   KRGCTLTTRDFETLQQMFEEHRDRNEAMTMLLRHKLETARVTRPEVTPDDVVTLNSRISF 63

Query: 63  RNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVL 122
           R + +G    R +            L +    G ALLGL  G          +   L+V 
Sbjct: 64  R-VGNGMPETRIICRDRSRGPLGYFLPITTIRGLALLGLTEGQMTPVSRGRSLVEILQVT 122

Query: 123 ELEYQPEAAG 132
            + YQPE A 
Sbjct: 123 AIHYQPERAA 132


>UniRef50_A1TE43 Transcription elongation factor greA n=11 Tax=Corynebacterineae
           RepID=GREA_MYCVP
          Length = 164

 Score = 91.3 bits (226), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 48/135 (35%), Gaps = 12/135 (8%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHDV 53
           +RP I     D      L E   Y                L   L+ A++         +
Sbjct: 27  NRPVIAAEINDRREEGDLRENGGYHAAREQQGQEEARIRQLQELLNNAKV-GEAPKQSGI 85

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQL---SVMAPVGAALLGLRVGDSIHWE 110
               S VK     D +     L+   +   S+ +L   S  +P+G AL+  +VG+S  + 
Sbjct: 86  ALPGSVVKVYYDDDEKDTETFLIGTREQGVSDGKLEVYSPNSPLGGALIDAKVGESRSYT 145

Query: 111 LPGGVATHLEVLELE 125
           +P G    + ++  E
Sbjct: 146 VPSGNTVKVTLVSAE 160


>UniRef50_C7M0F0 GreA/GreB family elongation factor n=1 Tax=Acidimicrobium
           ferrooxidans DSM 10331 RepID=C7M0F0_ACIFD
          Length = 160

 Score = 90.9 bits (225), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 48/130 (36%), Gaps = 10/130 (7%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHDVV 54
           R  I      A  +  L E   Y                +   L  A++    ++P D V
Sbjct: 26  RIEIAKAIEAARALGDLSENGDYHAAKDAQGKMEARIRQIQQILQSARVV-SADLPTDEV 84

Query: 55  TMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGG 114
                V  R   + +V    +    +       +S  +P+G ALLG RVG  + +E P G
Sbjct: 85  RPGVVVGLRYEGEDDVEHYLVGSIEERHPGLEVVSPTSPLGEALLGARVGAWVEYEAPRG 144

Query: 115 VATHLEVLEL 124
               ++V+E+
Sbjct: 145 T-LKVQVVEI 153


>UniRef50_Q848L1 GreA n=1 Tax=uncultured bacterium RepID=Q848L1_9BACT
          Length = 597

 Score = 90.9 bits (225), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 41/111 (36%), Gaps = 3/111 (2%)

Query: 18  ILLEQPA-YAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLV 76
            L E+            ++A L  A +      P D V   + V   +   G      LV
Sbjct: 489 DLPERSELATLERELAQVSAVLQGAIVIRLASPPRDEVRFGAEVVVED-DRGSRSRFQLV 547

Query: 77  YPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQ 127
              +       ++  +P+G AL G R+G  + W  P G   ++ V E+ Y 
Sbjct: 548 GENEAAPERGLVNWFSPLGRALAGARLGQRVEWTTPAGRGAYV-VREISYP 597


>UniRef50_D2QK34 GreA/GreB family elongation factor n=1 Tax=Spirosoma linguale DSM
           74 RepID=D2QK34_9SPHI
          Length = 171

 Score = 90.6 bits (224), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 2/97 (2%)

Query: 31  ADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGE-VRVRTLVYPAKMTDSNTQLS 89
             ALN  +  A++ + ++ P D V   + V   + S G+  +  T+V   +    + +++
Sbjct: 74  IAALNQRIATAKVVNMQDHPLDEVRFGATVTLSSQSTGKADQQLTIVGVDEADAIHGRIA 133

Query: 90  VMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
             AP+   LLG +VGD I    P G    LE+  + Y
Sbjct: 134 FPAPIARLLLGKKVGDFITLRTPRGEN-ALEITSIYY 169


>UniRef50_Q13CU9 Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris
           BisB5 RepID=Q13CU9_RHOPS
          Length = 156

 Score = 88.2 bits (218), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 42/127 (33%), Positives = 60/127 (47%), Gaps = 2/127 (1%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKF 62
            P + I   D  R+  +  Q   +  P+   L +EL+RA +      P   V ++  V F
Sbjct: 2   NPPVSIASRDFGRLRQIAVQALASRDPVGRFLFSELERAVVID-SPAPPLTVRLDDWVTF 60

Query: 63  RNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVL 122
           R   D  +  R LV P     +   LSV++PVGAAL+GLR G  +H++   GV     V 
Sbjct: 61  RADDDQPLESRILVLPGHYRRNALHLSVLSPVGAALVGLRPGARMHYQGVDGVQHVATVE 120

Query: 123 ELEYQPE 129
            LE  PE
Sbjct: 121 SLE-PPE 126


>UniRef50_A6X2G5 GreA/GreB family elongation factor n=2 Tax=Ochrobactrum
           RepID=A6X2G5_OCHA4
          Length = 156

 Score = 88.2 bits (218), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 47/125 (37%), Gaps = 9/125 (7%)

Query: 6   IIINDLDAERIDILL--------EQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMN 57
           + + + +  R+   L                          + A++  P     DVV   
Sbjct: 33  LTMIEDEIARLQRELADANVAGERSAIARISRDLRYWTTRRENAELSVPVP-DSDVVRFG 91

Query: 58  SRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVAT 117
             V+  NL DG+VR  T+V   +   SN ++S +APV   L G  VGD +          
Sbjct: 92  MTVELENLDDGKVRRWTIVGEDEADPSNGKISHVAPVAILLFGKPVGDVVKINNVEWEIV 151

Query: 118 HLEVL 122
            L+++
Sbjct: 152 SLKIV 156


>UniRef50_C6B1R3 GreA/GreB family elongation factor n=16 Tax=cellular organisms
           RepID=C6B1R3_RHILS
          Length = 160

 Score = 87.9 bits (217), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 31/120 (25%), Positives = 46/120 (38%), Gaps = 10/120 (8%)

Query: 9   NDLDAER-IDILLEQPAYAGL--PIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNL 65
              DA   I+ + E+   A         L A L  AQ+  P     D V   S V FR  
Sbjct: 48  EAYDAASPIEDVNERRRQAASPLRDLRYLTARLRTAQLM-PSPTSIDTVAFGSTVTFR-R 105

Query: 66  SDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
            DG V+   +V   +       +S ++PV   L+G  VGD +           LE++ + 
Sbjct: 106 DDGRVQTYRIVGEDEADPKAGSISYVSPVARLLMGKAVGDMVE-----TGGQELEIIAIA 160


>UniRef50_B9KMW2 Transcription elongation factor n=3 Tax=Rhodobacter sphaeroides
           RepID=B9KMW2_RHOSK
          Length = 164

 Score = 87.9 bits (217), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 27/114 (23%), Positives = 43/114 (37%), Gaps = 2/114 (1%)

Query: 14  ERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVR 73
            R D L   P  A       L A +  A +  P   P D V     V   +   G   V 
Sbjct: 52  AREDRLDRLPEAAAERDIRYLEARIASAILVDPAAQPLDEVAFGLAVTVED-EAGRRTVW 110

Query: 74  TLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQ 127
            +    +   +  +++  AP+  AL+G R+G+ + W  P G    L V  + + 
Sbjct: 111 EITGEDEAQATARRIAPQAPLARALMGARLGEKVVWTRPAGE-VTLTVTGIAHP 163


>UniRef50_B1ZQE9 GreA/GreB family elongation factor n=1 Tax=Opitutus terrae PB90-1
           RepID=B1ZQE9_OPITP
          Length = 166

 Score = 87.9 bits (217), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 25/100 (25%), Positives = 40/100 (40%), Gaps = 2/100 (2%)

Query: 26  AGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSN 85
                A  L   L  A++ S       +V   ++V  +   DG      +V   +     
Sbjct: 69  KLDERARELQQILATAEIISSPAPDRSIVRFGAKVTVK-EEDGTTSTYRIVGIDETEFYT 127

Query: 86  TQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
             +S  +P+  ALLG  VGD I ++ P G    LE+  +E
Sbjct: 128 GGISFQSPLAQALLGASVGDRIQFQSPAG-PRQLEIQLIE 166


>UniRef50_B1ZD84 GreA/GreB family elongation factor n=4 Tax=Methylobacterium
           RepID=B1ZD84_METPB
          Length = 149

 Score = 87.9 bits (217), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 39/127 (30%), Positives = 61/127 (48%), Gaps = 1/127 (0%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
            RP I +   D +R+          G P AD L ++L+RA   +    P DVV +  RV+
Sbjct: 6   KRPPITLPTYDFDRLVASGLAAYQRGDPYADLLLSKLERAASFAASPPPRDVVAVTCRVR 65

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWE-LPGGVATHLE 120
           +R   +  VR   LVYP  +  S  ++S  + +G A+LGLR GD I +     G    +E
Sbjct: 66  YRLDDEPTVRAHRLVYPGHVIASEEEISAASALGVAMLGLRRGDRIPFRDNATGSEHVVE 125

Query: 121 VLELEYQ 127
           + ++   
Sbjct: 126 IADVGPP 132


>UniRef50_A5FHJ3 GreA/GreB family elongation factor n=3 Tax=Flavobacteriaceae
           RepID=A5FHJ3_FLAJ1
          Length = 143

 Score = 87.5 bits (216), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 35/125 (28%), Positives = 64/125 (51%), Gaps = 2/125 (1%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           MS+  II+     + I   + +         + L +EL  A     + +P DVV++N +V
Sbjct: 18  MSQNNIILTTGTYDLIKDHVRRKK-VTPQEEELLLSELKHATQVLRKNLPEDVVSVNRKV 76

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
            +++ +  + +   LV P K+  S  ++SV++  G A++G +VGD I W    G    LE
Sbjct: 77  TYKDHNTNQEKTILLVGPEKVKVSKNKISVLSDEGIAMVGYKVGDLIEWPAKKGH-LKLE 135

Query: 121 VLELE 125
           +L++E
Sbjct: 136 ILKVE 140


>UniRef50_A6SZ83 Transcription elongation factor, greA family n=2
           Tax=Oxalobacteraceae RepID=A6SZ83_JANMA
          Length = 139

 Score = 87.5 bits (216), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 51/133 (38%), Gaps = 3/133 (2%)

Query: 7   IINDLDAERIDILLEQPAYAGLPIA---DALNAELDRAQMCSPEEMPHDVVTMNSRVKFR 63
            +   DA  +  + E     G       + L   +  + +   +      VT+ S V + 
Sbjct: 6   YLTQNDAATLSRIAEHLLRMGEVEINAGEQLIDIISTSIILPVDVQRKGYVTLYSTVSYS 65

Query: 64  NLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLE 123
            +   EVR  T+V P         +S + P+G AL+G +   ++   LP      L++L+
Sbjct: 66  PVDTEEVRKLTIVCPQDANPQLALISALTPIGLALIGRKALTTVEVALPSKRVEKLKILD 125

Query: 124 LEYQPEAAGDYLL 136
           +       G+  L
Sbjct: 126 VTPLDSTMGELAL 138


>UniRef50_B9J7D6 Transcription elongation factor protein n=52
           Tax=Alphaproteobacteria RepID=B9J7D6_AGRRK
          Length = 160

 Score = 86.3 bits (213), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 23/97 (23%), Positives = 36/97 (37%), Gaps = 7/97 (7%)

Query: 29  PIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQL 88
                L   +  AQ   P     D+V   S V F +  DG V+   +V   +       +
Sbjct: 71  RDLRYLAERIRTAQPI-PAPASIDIVAFGSTVTF-SRDDGRVQTYRIVGEDEADPKTGSI 128

Query: 89  SVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
           S ++PV   L+G  VGD             LE++ + 
Sbjct: 129 SFVSPVAKLLMGKSVGDVASV-----GDQELEIIAIA 160


>UniRef50_D2KXD7 Transcription elongation factor n=1 Tax=Lactobacillus fermentum
           RepID=D2KXD7_LACFE
          Length = 303

 Score = 85.9 bits (212), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 39/111 (35%), Gaps = 13/111 (11%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHDV 53
            RPT+I     A  +  L E   Y+               L+ +L  A++          
Sbjct: 38  KRPTLIARLKAARVLGDLSENTEYSTAKRELRHLESCLRYLDKQLTYAKVIDVS--DDGK 95

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVY---PAKMTDSNTQLSVMAPVGAALLGL 101
           V +   V  R L D E     +V      + + +   L+  +P+G AL G 
Sbjct: 96  VALGKVVTIRFLDDQEEATYQIVGRYQAEQASLTEEVLAFDSPLGLALKGK 146


>UniRef50_B1I1G7 GreA/GreB family elongation factor n=1 Tax=Candidatus Desulforudis
           audaxviator MP104C RepID=B1I1G7_DESAP
          Length = 154

 Score = 85.9 bits (212), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 20/102 (19%), Positives = 42/102 (41%), Gaps = 1/102 (0%)

Query: 27  GLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNT 86
                + +   L RA++   +  P  +  +   ++  +L  G   +  +V P ++  +  
Sbjct: 53  LDDYLNRVRELLARARVVEGQCPPLPLTLIGCDIRVEDLDRGHSEMFRVVSPYEINPAAG 112

Query: 87  QLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQP 128
            +S ++PVG  LL    G  +  + PGG      V+ + Y  
Sbjct: 113 HVSFLSPVGRGLLLKEPGQVLAVQAPGGTFR-YRVVSVTYPA 153


>UniRef50_C4L6P4 GreA/GreB family elongation factor n=1 Tax=Exiguobacterium sp. AT1b
           RepID=C4L6P4_EXISA
          Length = 152

 Score = 85.2 bits (210), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 30/100 (30%), Positives = 45/100 (45%), Gaps = 3/100 (3%)

Query: 26  AGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSN 85
                   LN  LD A +     +  +VVT  +RV  R +   E     +V  A+     
Sbjct: 55  RIEADILELNHLLDDATIVES--VQSEVVTFGNRVVIREVQQEETERYRIVSEAEADLER 112

Query: 86  TQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
             +SV +P+G  L+G  +G +I  E PGG    +EVL +E
Sbjct: 113 GSISVTSPLGRRLMGATMGQTIQVETPGGTIQ-VEVLHIE 151


>UniRef50_B4RDE4 Transcription elongation factor GreA/GreB, family n=1
           Tax=Phenylobacterium zucineum HLK1 RepID=B4RDE4_PHEZH
          Length = 161

 Score = 85.2 bits (210), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 28/119 (23%), Positives = 43/119 (36%), Gaps = 3/119 (2%)

Query: 7   IINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLS 66
            + DLD        E              A    AQ+        D V   +RV FR   
Sbjct: 40  ALADLDQRIAGCEDEAQMAWLRRDQRYWAARRANAQVVE-SPADPDEVAFGTRVTFR-KD 97

Query: 67  DGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
            G      LV   +   +  +LS +AP+  A++G   G+++  E        LE+L +E
Sbjct: 98  GGAPETVELVGEDEAEPAQGRLSWVAPLARAMIGAMPGETVELETRTPAIR-LEILAVE 155


>UniRef50_B8DTJ6 Transcription elongation factor GreA n=15 Tax=Bifidobacteriaceae
           RepID=B8DTJ6_BIFA0
          Length = 160

 Score = 84.8 bits (209), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 44/131 (33%), Gaps = 15/131 (11%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHDVV 54
           R  I      A     L E   Y              + L  +L  A++    +     V
Sbjct: 30  RDEITERIAAARAEGDLSENGGYQAAREEQSKNEGRINELIVKLRNAKIIEAPK--AGEV 87

Query: 55  TMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQ--LSVMAPVGAALLGLRVGDSIHWELP 112
              S V       G      +     +T +     +S  +P+G A++G +VGD + ++ P
Sbjct: 88  GNGSLVTIEL--GGNEMQYVI-GSRDITVATDYDVISPESPIGGAIIGHKVGDVVTYKAP 144

Query: 113 GGVATHLEVLE 123
            G    + + E
Sbjct: 145 NGREISVTIKE 155


>UniRef50_A5D4X0 Putative uncharacterized protein n=1 Tax=Pelotomaculum
           thermopropionicum SI RepID=A5D4X0_PELTS
          Length = 150

 Score = 84.8 bits (209), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 26/102 (25%), Positives = 44/102 (43%), Gaps = 1/102 (0%)

Query: 24  AYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTD 83
                     L+  +  A      +     VT+ S V+ +NLS+ EV    +V P     
Sbjct: 44  ENLIENYIQRLDRLIRNASKSKIADNKVPFVTIGSEVEIQNLSEQEVYKYFIVNPFYSEV 103

Query: 84  SNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
               +S ++PVG +LL  +VGD +  + PGGV    ++  + 
Sbjct: 104 REGHISFLSPVGKSLLLKKVGDEVEVKAPGGVFR-YKIKSIR 144


>UniRef50_Q5SJG6 Anti-cleavage anti-GreA transcription factor Gfh1 n=6
           Tax=Thermaceae RepID=Q5SJG6_THET8
          Length = 156

 Score = 84.4 bits (208), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 52/124 (41%), Gaps = 6/124 (4%)

Query: 5   TIIINDLDAERIDILLEQPA-YAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFR 63
            ++ +  D +   +   +          D+L   L RA +        +V+ + S V+  
Sbjct: 35  ELMESSDDYDDSGLEAAKQEKARIEARIDSLEDILSRAVILEEG--SGEVIGLGSVVELE 92

Query: 64  NLSDGEVRVRTLVYPAKMTDSN--TQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           +   GE     +V PA+    +   ++S  +P+G ALLG RVGD +  + P G      V
Sbjct: 93  DPLSGERLSVQVVSPAEANVLDTPMKISDASPMGKALLGHRVGDVLSLDTPKGR-REFRV 151

Query: 122 LELE 125
           + + 
Sbjct: 152 VAIH 155


>UniRef50_C1ABM5 Transcription elongation factor GreA n=1 Tax=Gemmatimonas
           aurantiaca T-27 RepID=C1ABM5_GEMAT
          Length = 161

 Score = 84.4 bits (208), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 44/123 (35%), Gaps = 9/123 (7%)

Query: 9   NDLDAERIDILLEQPAYAGL--------PIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
               A  +  L E   Y                L   + +       ++P D V + S+V
Sbjct: 27  EIRKAVELGDLKENSEYKAALERQQFVQARLGQLTQRVTKLANIDITQIPGDRVGLGSKV 86

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
              +L         LV+       +  +++ +P+G AL G  VG+    +LP      L+
Sbjct: 87  IVEDLQSKARETYELVFGDAGELHDGHVTMGSPIGRALQGKSVGEEAILKLPT-RIRKLQ 145

Query: 121 VLE 123
           ++E
Sbjct: 146 IVE 148


>UniRef50_Q88Q22 Transcription elongation factor, putative n=11 Tax=Pseudomonas
           RepID=Q88Q22_PSEPK
          Length = 165

 Score = 84.4 bits (208), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 3/104 (2%)

Query: 21  EQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAK 80
           +Q            +A +  AQ+  P    H  V + SRV+F +  D + +V  LV   +
Sbjct: 61  KQRLADTERDLRYFSARVQSAQVV-PAATSHSKVQIGSRVRFVDAQD-QEQVVQLVGEDE 118

Query: 81  MTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
               +  ++  +P+G ALLG   GD + W  P G    +EV+E+
Sbjct: 119 ADAGHGLINWGSPLGRALLGAGPGDEVVWRRPVGEQV-IEVVEI 161


>UniRef50_C4RPW8 Transcription elongation factor n=1 Tax=Micromonospora sp. ATCC
           39149 RepID=C4RPW8_9ACTO
          Length = 166

 Score = 84.4 bits (208), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 46/137 (33%), Gaps = 14/137 (10%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIAD--------ALNAELDRAQMCSPEEMPHDV 53
           +RP I            L E   Y                L   L  AQ+   E    D 
Sbjct: 31  NRPAIAAEINARREEGDLRENGGYHAAREEQGKQEGRILYLKELLRTAQV--GEAPSADT 88

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQ--LSVMAPVGAALLGLRVGDSIHWEL 111
           V+    V      D +     L+   +++ +      S  + +G ++LG R G ++ +  
Sbjct: 89  VSPGMVVTIYFDDDTDDTETFLLGSREISSTTELTVYSPESALGKSILGTRPGQTVTYTA 148

Query: 112 PGGVATHLEVLELEYQP 128
           P G    + V  + ++P
Sbjct: 149 PSGADIKVTV--VRFEP 163


>UniRef50_A0JU41 GreA/GreB family elongation factor n=21 Tax=Actinomycetales
           RepID=A0JU41_ARTS2
          Length = 164

 Score = 84.0 bits (207), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 40/130 (30%), Gaps = 12/130 (9%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHDVV 54
           R  I+     A +   L E   Y                L   L  A +         +V
Sbjct: 32  RAEIVQKIEAARQEGDLKENGGYHAAKEEQGKIEARIRQLTVLLRDAHV-GESPADDGIV 90

Query: 55  TMNSRVKFRNLSDGEVRVRTLVYPAKM-TDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
                V  R    G+     L              S  +P+G+A++G + GD + +  P 
Sbjct: 91  EPGMIVVARI--AGDEETFLLGSREIAGDSDLDVFSEKSPLGSAIVGHKEGDKLSYTAPN 148

Query: 114 GVATHLEVLE 123
           G    +E+L 
Sbjct: 149 GKDITVEILS 158


>UniRef50_B2GLP4 Transcription elongation factor n=3 Tax=Actinomycetales
           RepID=B2GLP4_KOCRD
          Length = 165

 Score = 82.9 bits (204), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 48/135 (35%), Gaps = 18/135 (13%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHDVV 54
           R  I+     A     L E   Y                L   L+ AQ+         V+
Sbjct: 29  RQEIVDRIEQARSEGDLKENGGYHAAREEQGKNEGRIVQLTQLLENAQV-GEAPADDGVI 87

Query: 55  TMNSRVKFRNLSDGEVRVRTLVYPAKM--TDSNTQ----LSVMAPVGAALLGLRVGDSIH 108
                V       G+     L+   ++    +  +     S  +P+GAA+ G +VG+++ 
Sbjct: 88  EAGMVVTAEI--AGDEMTF-LMGSREVAEDLTGGEDLEVFSERSPMGAAINGHKVGETVS 144

Query: 109 WELPGGVATHLEVLE 123
           ++ P G    +++L+
Sbjct: 145 YQAPNGKDITVKILK 159


>UniRef50_Q0PQI1 Transcription elongation factor (Fragment) n=1 Tax=Endoriftia
           persephone 'Hot96_1+Hot96_2' RepID=Q0PQI1_9GAMM
          Length = 166

 Score = 81.7 bits (201), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 14/103 (13%), Positives = 28/103 (27%), Gaps = 9/103 (8%)

Query: 2   SRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMPHDV 53
            R  ++     A       E   Y                L   +   ++          
Sbjct: 57  RRREVVKALSAAAAEGDRSENAEYIYRKKELREIDRRIRYLQKRIPELKVVEQPPSNRQQ 116

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGA 96
           V   + V   +   G      +V P ++      +S+ +P+GA
Sbjct: 117 VFFAAWVTLEDEQ-GVTHRYRIVGPDEIDHQADYISMDSPLGA 158


>UniRef50_D2NP88 Transcription elongation factor n=2 Tax=Rothia mucilaginosa
           RepID=D2NP88_9MICC
          Length = 189

 Score = 81.7 bits (201), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 23/135 (17%), Positives = 40/135 (29%), Gaps = 18/135 (13%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHDVV 54
           R  I+     A     L E   Y                L   L+ A +         VV
Sbjct: 53  RQEIVDRIAQARDEGDLRENGGYHAARDEQAKNEARIKQLKHLLETAHIGD-TPADDGVV 111

Query: 55  TMNSRVKFRNLSDGEVRVRTLVYPAK------MTDSNTQLSVMAPVGAALLGLRVGDSIH 108
                ++      G      L+   +              S  +P+GAA++G + GD + 
Sbjct: 112 EHGMVIEAEV--AGRTLKF-LLGSREIEDTLPAGSDLKVFSEKSPLGAAIMGAKQGDEVT 168

Query: 109 WELPGGVATHLEVLE 123
           +  P G     +++ 
Sbjct: 169 YTAPNGKELSAKIIS 183


>UniRef50_A7HXN3 GreA/GreB family elongation factor n=1 Tax=Parvibaculum
           lavamentivorans DS-1 RepID=A7HXN3_PARL1
          Length = 171

 Score = 81.3 bits (200), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 3/129 (2%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKF 62
           RP  ++   D  R+++   +      P+   + A+L+ A++ S  E+   V T+ S V++
Sbjct: 24  RP--LLTRHDFARLELACFEQLDLLNPMQPFVRAKLEEARIVSGNEIAETVATLGSIVRY 81

Query: 63  RNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVL 122
           R       R    +       +   LSV+ P+G ALLG   GD    EL  G    + + 
Sbjct: 82  RIEDRMLERRLLQLDNRHA-PNGQYLSVLTPIGLALLGRSTGDLCEAELFNGAKLTIRIA 140

Query: 123 ELEYQPEAA 131
            +E+QPEA 
Sbjct: 141 LIEHQPEAE 149


>UniRef50_A6DK30 Putative uncharacterized protein n=1 Tax=Lentisphaera araneosa
           HTCC2155 RepID=A6DK30_9BACT
          Length = 693

 Score = 80.9 bits (199), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 45/131 (34%), Gaps = 15/131 (11%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLPIAD--------ALNAELDRAQMCSPEEMP-HDVV 54
           P        A     L E   +                L+A L++       E    + V
Sbjct: 557 PDNSKAIAAAREHGDLRENFEFRAAKDRQKYLQLRVGELDAMLNKIGPTDFSEFKVKNRV 616

Query: 55  TMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGG 114
              ++V  ++         ++V           LS   P+  ++LG +VGDSI   LPGG
Sbjct: 617 IPAAKVTIKSPEA--ETTYSIVGMLDGDPDKNWLSFETPLAKSMLGHQVGDSIE--LPGG 672

Query: 115 VATHLEVLELE 125
                E+L +E
Sbjct: 673 D--EAEILAVE 681


>UniRef50_C1CW74 Putative transcription elongation factor n=1 Tax=Deinococcus
           deserti VCD115 RepID=C1CW74_DEIDV
          Length = 162

 Score = 80.9 bits (199), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 30/125 (24%), Positives = 46/125 (36%), Gaps = 10/125 (8%)

Query: 9   NDLDAERIDILLEQPAY------AGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKF 62
              DA  ++      A       A       L   L RA +   E++P   V + S V  
Sbjct: 36  TVDDAMDLENRSLNAAQIGQERIAIEARILELEDVLARAVIVEEEDLPRGQVAVGSVVML 95

Query: 63  RNLSDGEVRVRTLVYPAKMTDSNT---QLSVMAPVGAALLGLRVGDSIHWELPGGVATHL 119
            +   G      LV   +++       Q+S  +PVG AL+G R G++   EL  G     
Sbjct: 96  EDDKHGRQLQVQLVSAVEISAMTEGVTQVSDDSPVGKALMGRREGETFDVELEAGRVQ-Y 154

Query: 120 EVLEL 124
            V  +
Sbjct: 155 TVRSV 159


>UniRef50_Q1IZY0 GreA/GreB family elongation factor n=4 Tax=Deinococci
           RepID=Q1IZY0_DEIGD
          Length = 162

 Score = 79.8 bits (196), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 40/110 (36%), Gaps = 4/110 (3%)

Query: 20  LEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPA 79
            ++         + L   L RA +    E     V + + V   N +  +     +V   
Sbjct: 54  AKREKLNIEARIEELEDTLARATLIEDHE-NAGRVELGAVVTLNNETTKQTMRVQVVSAP 112

Query: 80  KMTDSNT---QLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
           + T       ++S  +PVG  L+G +  ++    L  G      V ++EY
Sbjct: 113 EATVLGGSLPRISEESPVGRQLMGRKKDETFVVNLENGKQVKYRVQDIEY 162


>UniRef50_B6BTF1 GreA/GreB family elongation factor n=2 Tax=Betaproteobacteria
           RepID=B6BTF1_9PROT
          Length = 164

 Score = 79.4 bits (195), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 18/114 (15%), Positives = 39/114 (34%), Gaps = 5/114 (4%)

Query: 15  RIDILLEQPAYA--GLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRV 72
            ++   E                   + A +    E  ++ V   + V   + +D E   
Sbjct: 54  ELEDSPENKQNKMKLERDLRYYLKRFETAILIDKHE-ENNKVLFGAHVILIDEND-EAYK 111

Query: 73  RTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
             +V   +      +LS ++P+   L+G  +GD + W+   G      +  + Y
Sbjct: 112 FQIVGEDEADIKQNKLSYVSPLAKELIGSLIGDEVVWKRADGNRVVF-IDSINY 164


>UniRef50_A1A150 Transcription elongation factor GreA n=6 Tax=Bifidobacterium
           RepID=A1A150_BIFAA
          Length = 159

 Score = 78.6 bits (193), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 44/130 (33%), Gaps = 13/130 (10%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHDVV 54
           R  I+     A     L E   Y              D L  +L  A++          V
Sbjct: 29  RDEILSKVSAARAEGDLSENGGYQAAREAQRVNQGRIDELTVKLRNAKIL--TAPKAGEV 86

Query: 55  TMNSRVKFRNLSDGEVRVRTLVYPAKMTDSN-TQLSVMAPVGAALLGLRVGDSIHWELPG 113
              S V      +G   V  L        ++ + +S  +P+GAA+ G   GD++ +  P 
Sbjct: 87  GDGSLVTLEV--NGREMVYVLGTRDLSIATDYSIISPESPIGAAINGAHAGDTVTYTAPN 144

Query: 114 GVATHLEVLE 123
           G    + + E
Sbjct: 145 GREISVTIKE 154


>UniRef50_Q97HP4 Transcription elongation factor n=1 Tax=Clostridium acetobutylicum
           RepID=Q97HP4_CLOAB
          Length = 158

 Score = 78.6 bits (193), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 43/126 (34%), Gaps = 13/126 (10%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGL--------PIADALNAELDRAQMCSPEEMPHD 52
           + R  I    ++A       E   Y                ++  L  A +   +++  D
Sbjct: 23  VKRHEIAKKKMEAAAFGDRSENAEYKAAKEEYYHNNRRLGQISRLLKNAIIVEEDKID-D 81

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKM---TDSNTQLSVMAPVGAALLGLRVGDSIHW 109
            V + S +  + +   E     LV    +    +    +SV +P G AL    VGDSI  
Sbjct: 82  EVNIGSEMLLK-IGADETFKAKLVTTLNISVEDEDIEYISVDSPFGKALYKKHVGDSIDV 140

Query: 110 ELPGGV 115
            LP   
Sbjct: 141 NLPDNR 146


>UniRef50_Q1IXC6 GreA/GreB family elongation factor n=1 Tax=Deinococcus geothermalis
           DSM 11300 RepID=Q1IXC6_DEIGD
          Length = 158

 Score = 78.2 bits (192), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 29/123 (23%), Positives = 42/123 (34%), Gaps = 8/123 (6%)

Query: 9   NDLDAERIDILLEQPAYAG----LPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRN 64
              DA  ++    Q A             L   L RA +    +     V + S V  R+
Sbjct: 36  TLDDAMDLEDRSFQAAQYDLPTMEARILELEDVLARAVIVEEPQARDGGVALGSVVVLRD 95

Query: 65  LSDGEVRVRTLVYPAKMTDSNT---QLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
                     LV   ++        Q+S  +PVG ALLG R G+S   +L    A    V
Sbjct: 96  EQHDRELRVQLVSAVEVDALAEGATQVSEDSPVGKALLGRRAGESFEVDLGSSRAR-YTV 154

Query: 122 LEL 124
             +
Sbjct: 155 KSI 157


>UniRef50_Q9RRW0 Transcription elongation factor n=1 Tax=Deinococcus radiodurans
           RepID=Q9RRW0_DEIRA
          Length = 183

 Score = 78.2 bits (192), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 30/133 (22%), Positives = 47/133 (35%), Gaps = 10/133 (7%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAG----LPIADALNAELDRAQMCSPEEMPHDVVTMN 57
               ++   ++A   + L    A           + L  +L RA + +P         + 
Sbjct: 51  EARRVVQEQMEANENESLDLAAAQETLGAVEARIEELEDQLARAVVLAPGAGNDGRAAVG 110

Query: 58  SRVKFRNLSDGEVRVRTLVYPAKMTDSNT-----QLSVMAPVGAALLGLRVGDSIHWELP 112
           SRV   N+  G      LV  A+            +S  +PVG ALLG R G+    +L 
Sbjct: 111 SRVTLLNIGLGRELPLHLVSAAEAAAGPGTSGVALVSTESPVGRALLGRRAGEEFTVDLG 170

Query: 113 GGVATHLEVLELE 125
                   VL +E
Sbjct: 171 R-TQAQYRVLMVE 182


>UniRef50_Q83FN6 Transcription elongation factor n=3 Tax=Micrococcineae
           RepID=Q83FN6_TROWT
          Length = 172

 Score = 77.8 bits (191), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 42/132 (31%), Gaps = 12/132 (9%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHDVV 54
           R  I      A     L E   Y+               L   L  A++         VV
Sbjct: 39  RKEIAKRIEQARSEGDLRENGGYSAAKEEQARIEGRIQQLQDLLRHARV-GQAPKARGVV 97

Query: 55  TMNSRVKFRNLSDGEVRVRTLVYPAKMTDSN-TQLSVMAPVGAALLGLRVGDSIHWELPG 113
                V  R    G  R   L        S+    S  + +G A+LGL+ G  I  + P 
Sbjct: 98  EPGVVVTARI--GGSERRFLLGNREIAHTSSLATYSESSAIGQAILGLKEGSEIECKSPT 155

Query: 114 GVATHLEVLELE 125
           G    + +L++E
Sbjct: 156 GALIKVAILKVE 167


>UniRef50_A3DJU3 GreA/GreB family elongation factor n=3 Tax=Clostridium thermocellum
           RepID=A3DJU3_CLOTH
          Length = 160

 Score = 77.5 bits (190), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 57/135 (42%), Gaps = 13/135 (9%)

Query: 7   IINDLDAERIDILLEQPAYAGLPIA----------DALNAELDRAQMCSPEEMPHDVVTM 56
            +++++ ER  +L E  A                 D +N+ L+  ++          V +
Sbjct: 17  HVSEIEKERDMLLNEHYAEETKESINFQEFFKNYLDRINSYLNTVRVDKNGSEACPFVII 76

Query: 57  NSRVKFRNLSDGEVRVRTLVYP--AKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGG 114
           NS V+  +  + E     +V P   +   S    S ++P+G ALL   V D++  ++P G
Sbjct: 77  NSIVEVFDCEEEEKCKYRIVLPFSKEYDTSIDCASCLSPLGRALLFKNVNDNVSVQIPTG 136

Query: 115 VATHLEVLELEYQPE 129
           +  H  +L++    E
Sbjct: 137 M-LHYTILDITLPDE 150


>UniRef50_A1TEF4 GreA/GreB family elongation factor n=5 Tax=Actinomycetales
           RepID=A1TEF4_MYCVP
          Length = 159

 Score = 77.5 bits (190), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 20/94 (21%), Positives = 32/94 (34%), Gaps = 1/94 (1%)

Query: 30  IADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLS 89
               ++  L RA   S       +      +  R    G+     L             +
Sbjct: 52  RIRQIHELLSRAD-HSTSPADDGIAEPGMVLTVRFDDTGDTETFLLGTRGTADPELEVYT 110

Query: 90  VMAPVGAALLGLRVGDSIHWELPGGVATHLEVLE 123
           V +P+G+ALLG   G+   + LP G    + VL 
Sbjct: 111 VASPLGSALLGAVPGEQRSFRLPNGSIQQVTVLA 144


>UniRef50_UPI0001746B72 nucleoside diphosphate kinase regulator protein, putative n=1
           Tax=Verrucomicrobium spinosum DSM 4136
           RepID=UPI0001746B72
          Length = 137

 Score = 76.3 bits (187), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 50/128 (39%), Gaps = 7/128 (5%)

Query: 7   IINDLDAERIDILLEQPAYAG---LPIADALNAELDRAQMC-SPEEMPHDVVTMNSRVKF 62
            I+  D   +   L+               L   L  A++     +    V  + + V+ 
Sbjct: 8   AISQSDLHTLRTFLDHDDAFNPLDARERSLLIERLQDAKVFEDESDDEPSVAGLQTLVRV 67

Query: 63  RNLSD--GEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
            +LS    +    TLV P +    + Q+S+++P+GAA+ G   G  +  + P G    L 
Sbjct: 68  EDLSTSPPDQFDFTLVLPHEANFEDDQISILSPLGAAVFGRSAGTQVVMDSPTGTRRLL- 126

Query: 121 VLELEYQP 128
           VL +  + 
Sbjct: 127 VLAVFRKA 134


>UniRef50_C6XVH8 Transcription elongation factor n=1 Tax=Pedobacter heparinus DSM
           2366 RepID=C6XVH8_PEDHD
          Length = 125

 Score = 76.3 bits (187), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 34/122 (27%), Positives = 63/122 (51%), Gaps = 2/122 (1%)

Query: 5   TIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRN 64
           +II++    + +   + +   +     + L  EL  A+    +++P DVVT+N+RV+ + 
Sbjct: 4   SIILSTGIFDLLKDHIRRRKLSKY-NQEKLEQELRNARQILSKDIPADVVTVNTRVRVKE 62

Query: 65  LSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
           L  G     TLV PAK  + +  LS+++P+G A++G   G  + WE+P G      + E+
Sbjct: 63  LETGAEFNYTLVPPAKARNKHNTLSILSPIGVAMVGYSQGSELKWEMPEG-IKAYRIEEV 121

Query: 125 EY 126
             
Sbjct: 122 TR 123


>UniRef50_UPI0001B58AC8 GreA/GreB family elongation factor n=1 Tax=Streptomyces sp. AA4
           RepID=UPI0001B58AC8
          Length = 148

 Score = 75.9 bits (186), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 19/102 (18%), Positives = 35/102 (34%), Gaps = 2/102 (1%)

Query: 22  QPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKM 81
           +           L   L  A +   +     +      +  R   DG V    L    ++
Sbjct: 38  ERRQHRQARIRQLQDLLQNA-VVGEDPPDDGIAEPGMVLTVRY-DDGGVETFLLAARDEV 95

Query: 82  TDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLE 123
                  S  +P+G AL G + G+   +E+P G    + ++E
Sbjct: 96  GGGLEVYSPDSPLGRALHGAKPGEQREYEVPSGALVRVTLVE 137


>UniRef50_Q1YFK5 Possible transcription elongation factor, GreA/GreB family n=2
           Tax=Aurantimonadaceae RepID=Q1YFK5_MOBAS
          Length = 158

 Score = 75.5 bits (185), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 21/133 (15%), Positives = 44/133 (33%), Gaps = 15/133 (11%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGL--------PIADALNAELDRAQMCSPEEMPHD 52
           ++   + + D +   ++   E    A                NA    A++  P +    
Sbjct: 29  VTPRGLSLIDAEIAALNERKEAARQADDKIAIANINRDLRYWNARRATAELIRPRDT-GG 87

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
                S V       G  +  T+V   +   S   +S ++P+  +L+G  VGD +     
Sbjct: 88  TAQFGSVVSIERED-GRTQQFTIVGIDEADPSAGLISYLSPLARSLIGRTVGDIVRAGTA 146

Query: 113 GGVATHLEVLELE 125
                  E++ + 
Sbjct: 147 D-----AEIIAIS 154


>UniRef50_B0T2S8 GreA/GreB family elongation factor n=15 Tax=Alphaproteobacteria
           RepID=B0T2S8_CAUSK
          Length = 161

 Score = 75.5 bits (185), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 21/102 (20%), Positives = 38/102 (37%), Gaps = 7/102 (6%)

Query: 23  PAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMT 82
                       +A    AQ+   +    DV+     V F +  DG  +   +V   +  
Sbjct: 64  AMARATRDLRYWSARRASAQLRELDPA-LDVLQFGGSVTF-DREDGRRQTFRIVGEDEAD 121

Query: 83  DSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
            +   +S ++PV  ALLG  VGD+            +E++ +
Sbjct: 122 PTQGSVSYVSPVARALLGKAVGDTAIVAGG-----EVEIIAI 158


>UniRef50_A4T6M8 GreA/GreB family elongation factor n=3 Tax=Mycobacterium
           RepID=A4T6M8_MYCGI
          Length = 157

 Score = 74.8 bits (183), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 21/107 (19%), Positives = 38/107 (35%), Gaps = 1/107 (0%)

Query: 17  DILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLV 76
              +     A       ++  L +A+  + +     V      +  R    G+     L 
Sbjct: 33  SDEVVDAWLARKERIRQIHELLTKAE-HAVDPADDGVAEPGMVLTVRFDDAGDTETFLLG 91

Query: 77  YPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLE 123
             A +       SV +P+G+ALLG   G    ++LP G    + +L 
Sbjct: 92  TRATVDSELDVYSVNSPMGSALLGATPGQQRSYQLPNGGTQQVTLLS 138


>UniRef50_A4CMC2 Putative uncharacterized protein n=1 Tax=Robiginitalea biformata
           HTCC2501 RepID=A4CMC2_9FLAO
          Length = 149

 Score = 74.4 bits (182), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 51/129 (39%), Gaps = 6/129 (4%)

Query: 1   MSRPTIIINDLDAERIDILLEQ----PAYAGLPIADALNAELDRAQMCSPEEMPHDVVTM 56
           M    ++    + + + + LE       YA    A  L   +  A +    E P DVV  
Sbjct: 2   MKYGKLVFERQEYDALLMSLEANRVYDDYAHQHAARLLKRNMASALILDQGECPDDVVRP 61

Query: 57  NSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVA 116
           +  V  + +     R   L    K   +   +SV++ +GA+++G   GD I +  P G  
Sbjct: 62  DVWVTLKGVPS-YRRTVRLASSGKPITTPGDISVISALGASIIGRSEGDVILFGQP-GNT 119

Query: 117 THLEVLELE 125
             L + ++ 
Sbjct: 120 MSLTIAKIS 128


>UniRef50_C6UNA6 Putative transcription elongation factor GreA n=1 Tax=Candidatus
           Hodgkinia cicadicola Dsem RepID=C6UNA6_HODCD
          Length = 155

 Score = 73.6 bits (180), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 19/116 (16%), Positives = 39/116 (33%), Gaps = 10/116 (8%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHDV 53
            +P +      A  +  L E   Y              + +   L RA+  +P     + 
Sbjct: 25  KKPALKAQLKAARSLGDLSENADYQAARREDKLNEARINEILQTLARAK-LAPARSAANR 83

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHW 109
            + NS V  +    G++    +V   +   +   + + + V    L  +VGD +  
Sbjct: 84  PSYNSTVVLKRAD-GKLLAFNIVGDDEAIATEANVGLSSDVARQCLNKKVGDVVVV 138


>UniRef50_D1N5G0 GreA/GreB family elongation factor n=1 Tax=Victivallis vadensis
           ATCC BAA-548 RepID=D1N5G0_9BACT
          Length = 698

 Score = 72.8 bits (178), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 23/131 (17%), Positives = 40/131 (30%), Gaps = 15/131 (11%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLPIAD--------ALNAELDRAQMCSPEEMP-HDVV 54
           P        A       E   +                L  EL R Q  S + +   D  
Sbjct: 562 PENREALKVARAHGDFRENSEFDAAKERRNFLSRRRGELERELTRIQPISLKSVRVEDSA 621

Query: 55  TMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGG 114
            + S ++ ++  +GE  V  L+           LS    +G A+L  +VG         G
Sbjct: 622 VIGSEIELQD-ENGEKEVYQLLGAWDGDPERRFLSYRTRLGKAVLNRKVGSEFS----DG 676

Query: 115 VATHLEVLELE 125
                +++ + 
Sbjct: 677 S-RQYKLIAVR 686


>UniRef50_C0QME5 GreA2 n=1 Tax=Desulfobacterium autotrophicum HRM2
           RepID=C0QME5_DESAH
          Length = 95

 Score = 72.5 bits (177), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 26/49 (53%), Positives = 35/49 (71%)

Query: 88  LSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQPEAAGDYLL 136
           +S++APVG+ALLGL +GD I W  PGG    + + E+ YQPE +GDY L
Sbjct: 47  ISILAPVGSALLGLSIGDKIEWPKPGGGNLKVRITEIIYQPERSGDYQL 95


>UniRef50_C0ZE34 Putative uncharacterized protein n=1 Tax=Brevibacillus brevis NBRC
           100599 RepID=C0ZE34_BREBN
          Length = 164

 Score = 72.5 bits (177), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 56  MNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGV 115
           + S VK     D      T+VYP  +   N ++S ++P+G  LL     DS+  E P G 
Sbjct: 86  LGSSVKVLFEEDQFEESFTVVYPTDIDPDNNRISFLSPIGRQLLLAAPHDSVVLESPVGR 145

Query: 116 ATHLEVLELEY 126
              ++V E+ +
Sbjct: 146 QQ-VQVREISF 155


>UniRef50_B4RBL3 Transcription elongation factor GreA/GreB family n=1
           Tax=Phenylobacterium zucineum HLK1 RepID=B4RBL3_PHEZH
          Length = 131

 Score = 72.1 bits (176), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 29/115 (25%), Positives = 56/115 (48%), Gaps = 4/115 (3%)

Query: 12  DAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVR 71
           D +R+  +       GL   + L  E++R  + + +++    V +NS V +++L     R
Sbjct: 19  DLKRLRAISLSRQAPGL-GQELLRREVERMAIRAYDDLR--FVRLNSTVTYKDLRTRRRR 75

Query: 72  VRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP-GGVATHLEVLELE 125
           +  +V P        ++S+++P+GAAL+GL  G    W     G    ++VL +E
Sbjct: 76  IVQVVQPEHAHQDENRVSILSPIGAALIGLPEGSVFRWAERIDGATRAVKVLAVE 130


>UniRef50_Q930S1 Putative uncharacterized protein n=1 Tax=Sinorhizobium meliloti
           RepID=Q930S1_RHIME
          Length = 183

 Score = 68.6 bits (167), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 34/133 (25%), Positives = 59/133 (44%), Gaps = 3/133 (2%)

Query: 1   MSRPTII-INDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSR 59
           MSR     +   D   +  +L++           L  +L+ A +   E++P +VVT++++
Sbjct: 11  MSREAFCQLTAGDLNILMSMLDETG-HTESFTILLREKLNYASVFFREDIPENVVTLDTQ 69

Query: 60  VKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHL 119
           V +  ++        LV  A    +N+ +SV    G ALLGL VG+        G    L
Sbjct: 70  VGYT-VNGVRTGPHLLVRNAAGRPANSAISVRTMRGLALLGLAVGERTEILGEDGWPETL 128

Query: 120 EVLELEYQPEAAG 132
            V  + +QPE+  
Sbjct: 129 AVERIVFQPESEA 141


>UniRef50_A5VFW5 GreA/GreB family elongation factor n=3 Tax=Sphingomonadaceae
           RepID=A5VFW5_SPHWW
          Length = 157

 Score = 68.6 bits (167), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 41/105 (39%), Gaps = 7/105 (6%)

Query: 21  EQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAK 80
           E+   +               ++  P     D     +RV++R   +G+ +   +V   +
Sbjct: 58  EEQLKSLKRDLRYWTTRHATMEIQPPA--DGDEAAFGTRVRYRL--NGQEKAVAIVGDDE 113

Query: 81  MTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
              +   +S  +P+  AL+G   GD   +    G A  +EVL +E
Sbjct: 114 ADPAAGLVSFSSPLARALIGAGEGDFADF---AGKADAIEVLGVE 155


>UniRef50_A6NYB0 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus
           ATCC 29799 RepID=A6NYB0_9BACE
          Length = 163

 Score = 68.2 bits (166), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 39/129 (30%), Gaps = 13/129 (10%)

Query: 8   INDLDAE----RIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHDVVT 55
             + DA      +    E   +               +L   LD  +  S    P   V 
Sbjct: 35  KEEQDAAQRASAMGDRSENAEWQIANDNIARYTVSIMSLVNTLDTYKKFSASYTPTGKVM 94

Query: 56  MNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGV 115
           + S +K  +          +            +S   P+G+A+LG   G  +  + P G 
Sbjct: 95  VGSTLKVVDRRHNSTLYIKIYPAGLGNAKIGAISTATPLGSAVLGKTAGTEVIVKAPLGD 154

Query: 116 ATHLEVLEL 124
             +  + E+
Sbjct: 155 IPYY-IEEV 162


>UniRef50_A4FCQ0 Transcription elongation factor G n=1 Tax=Saccharopolyspora
           erythraea NRRL 2338 RepID=A4FCQ0_SACEN
          Length = 120

 Score = 65.9 bits (160), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 23/113 (20%), Positives = 33/113 (29%), Gaps = 6/113 (5%)

Query: 24  AYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTD 83
                     +   L  A +         V      +  R   DGE     L        
Sbjct: 3   DGHRRARIREIQELLHDA-VVGEAPPDDGVAEPGMVLTVRF-DDGETETFLLGARVGADL 60

Query: 84  SN-TQLSVMAPVGAALLGLRVGDSIHWELP---GGVATHLEVLELEYQPEAAG 132
           +     S  +P+GAA  G R G+   + LP   GG         +  Q EA+ 
Sbjct: 61  NGLAVYSPESPLGAAQPGARQGEQRAYSLPKKNGGTVLIFVCGAVIRQAEASA 113


>UniRef50_UPI0001AF7314 transcription elongation factor GreA n=1 Tax=Mycobacterium kansasii
           ATCC 12478 RepID=UPI0001AF7314
          Length = 160

 Score = 65.9 bits (160), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 17/94 (18%), Positives = 33/94 (35%), Gaps = 1/94 (1%)

Query: 30  IADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLS 89
               ++  L RA +   +     +      +  R    G+     L             S
Sbjct: 56  RIRRIHDLLVRADV-GEDPPDDGIAEPGMVLTVRYHDTGDTETFLLGARGAEHCDVEVYS 114

Query: 90  VMAPVGAALLGLRVGDSIHWELPGGVATHLEVLE 123
             +P+GAA++G   G+   + LPGG    + ++ 
Sbjct: 115 PRSPLGAAVIGAIPGEQRSFTLPGGANLTVTLVS 148


>UniRef50_UPI0001AF7313 transcription elongation factor GreA n=1 Tax=Mycobacterium kansasii
           ATCC 12478 RepID=UPI0001AF7313
          Length = 159

 Score = 65.5 bits (159), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 16/104 (15%), Positives = 34/104 (32%), Gaps = 2/104 (1%)

Query: 29  PIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQL 88
                +   L  A +   +     +      V     + G+     L             
Sbjct: 52  ARIREIEQLLSSA-IVGVDTGGDVIAQPGMVVTISYEATGQTETFLLGRRGAQNADIPVY 110

Query: 89  SVMAPVGAALLGLRVGDSIHWELPGGVATHLE-VLELEYQPEAA 131
           S ++P+G A+ G R+G+   + +P G    +  +  + Y+   A
Sbjct: 111 STLSPLGRAITGARLGEQRVYSIPQGADLVVTLIEAVPYRDGRA 154


>UniRef50_Q2SLP2 Transcription elongation factor n=1 Tax=Hahella chejuensis KCTC
           2396 RepID=Q2SLP2_HAHCH
          Length = 160

 Score = 64.4 bits (156), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 40/126 (31%), Gaps = 11/126 (8%)

Query: 8   INDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEE-MPHDVVTMNSRVKFRNLS 66
           + +   +   +     A           A L   Q   P+     D V + + V      
Sbjct: 38  VAENKYDTFGLEASYLAEGQSRRVREFEAALASYQNTPPKHFTDQDEVAVFALVTLEAED 97

Query: 67  DGEVRVRTLVYPAKMTDSNTQ-------LSVMAPVGAALLGLRVGDSIHWELPGGVATHL 119
             E R+   V P                ++  +P+G  L+G  VGD +      G     
Sbjct: 98  GSERRLF--VGPEAAGFKFLLDEQEVLVITRRSPIGMKLMGKMVGDVVALVAGNGE-KEF 154

Query: 120 EVLELE 125
           E++E+E
Sbjct: 155 EIVEIE 160


>UniRef50_A8LPH9 Putative uncharacterized protein n=1 Tax=Dinoroseobacter shibae DFL
           12 RepID=A8LPH9_DINSH
          Length = 147

 Score = 64.4 bits (156), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 51/122 (41%), Gaps = 4/122 (3%)

Query: 8   INDLDAERIDILLEQPAYAGLPIADALNAELDRAQM-CSPEE--MPHDVVTMNSRVKFRN 64
           +   D  ++   LE    A  P ++ L   L    M   P E     D+V   SRV +  
Sbjct: 25  LPAADYRQLQEHLESCVCAIPPASELLVYVLANKVMNTRPSENLHQGDLVVGGSRVTYA- 83

Query: 65  LSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
           +  G+     LV+  +   ++  + V + +GA L+G++VG         G    L V+ +
Sbjct: 84  IDGGDPLRGQLVHRVRKGPTSALIPVASLLGATLIGMQVGQRAPLLFGNGRIGRLAVIAV 143

Query: 125 EY 126
           ++
Sbjct: 144 DH 145


>UniRef50_A9EFE9 Putative uncharacterized protein n=1 Tax=Oceanibulbus indolifex
           HEL-45 RepID=A9EFE9_9RHOB
          Length = 165

 Score = 62.8 bits (152), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 49/127 (38%), Gaps = 5/127 (3%)

Query: 5   TIIINDLDAERIDILLEQPAYAGLPIADALNAELDR--AQMCSPEEMP-HDVVTMNSRVK 61
             ++   D  ++   LE       P +  L   L      +    ++P  D+V   + V 
Sbjct: 25  PTVLPQSDYHKLQEHLEDCDNVTRPGSTLLAYVLANKLLNVRPVADLPYLDLVLGGTEVT 84

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           +  +         LV+ A+       ++V + +GA L+G+RVG+        G    L V
Sbjct: 85  YV-IDGAAPSTGLLVHTARPGAPGGVIAVASLLGATLIGMRVGERAPLLNQDGSIVTLSV 143

Query: 122 LELEYQP 128
           + +  QP
Sbjct: 144 ISVV-QP 149


>UniRef50_D0M4S6 Putative uncharacterized protein n=7 Tax=Vibrio RepID=D0M4S6_VIBSE
          Length = 138

 Score = 62.4 bits (151), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 32/84 (38%), Gaps = 1/84 (1%)

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            + +   V+  ++        TLV   K       L+V + +G+ LLG    D+   E+ 
Sbjct: 49  RIAVGDTVRLVDVERAYQYRMTLVNSHKSQPMTGMLAVDSYLGSRLLGRAKNDAFEIEIF 108

Query: 113 GGVATHLEVLELEYQPEAAGDYLL 136
                   + E+ +Q +     +L
Sbjct: 109 N-QRRCFVITEIVHQSQPPAQKML 131


>UniRef50_D0J1H3 Putative uncharacterized protein n=1 Tax=Comamonas testosteroni
           CNB-2 RepID=D0J1H3_COMTE
          Length = 160

 Score = 61.7 bits (149), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 45/125 (36%), Gaps = 11/125 (8%)

Query: 8   INDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDV-VTMNSRVKFRNLS 66
           I +   + + +     A      A+A+   +   +   P+       + + + +   +  
Sbjct: 38  IAENKYDTLGLEASYLAAGQARRAEAIRQAMANWRQFRPQPYNASKGIQLGALICLVDSD 97

Query: 67  DGEVRVRTLVYPAKMTDS-------NTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHL 119
           D + ++   + P                +S  AP+G A+LG   GD +  ++   V    
Sbjct: 98  DKQQQIF--LGPDGGNMKLFNGAELIQVISSKAPLGRAMLGKCEGDEVSIQV-APVRQQF 154

Query: 120 EVLEL 124
           EVL +
Sbjct: 155 EVLWV 159


>UniRef50_B1ZU18 GreA/GreB family elongation factor n=1 Tax=Opitutus terrae PB90-1
           RepID=B1ZU18_OPITP
          Length = 162

 Score = 61.7 bits (149), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 40/94 (42%), Gaps = 3/94 (3%)

Query: 38  LDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAA 97
           LDRA +        + + +    ++ +L +G +    L  P +   +   + V++  GAA
Sbjct: 38  LDRAAILPLSADWPEAIRLGVAFEYEDLDNGVIHTGCLCLPDEEATTAHGIPVLSRFGAA 97

Query: 98  LLGLRVGDSIHWELPGGVATHL--EV-LELEYQP 128
           ++G  VG+ + W         L   V   + ++P
Sbjct: 98  VIGCCVGNEVWWAEMDRSRRILVRRVGTAVAHEP 131


>UniRef50_C9Z2D0 Putative uncharacterized protein n=1 Tax=Streptomyces scabiei 87.22
            RepID=C9Z2D0_STRSW
          Length = 1845

 Score = 61.3 bits (148), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 37/113 (32%), Gaps = 6/113 (5%)

Query: 14   ERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDV-VTMNSRVKFRNLSDGEVRV 72
             ++     +        +  L A LD  Q+     +     V     V   +  +  +  
Sbjct: 1737 AQLADHDRRRQALQERRSH-LRAVLD--QVVPDSSLTGGAMVVPGCLVGVEDPDEPGIMT 1793

Query: 73   RTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
              +       D   +LS   P G AL+   VGD + W+   G    + V  ++
Sbjct: 1794 YEI--AMLAGDEAERLSPDTPQGKALMWREVGDEVSWQTERGTRMRVIVRYIQ 1844


>UniRef50_A1RN18 GreA/GreB family elongation factor n=11 Tax=Shewanella
           RepID=A1RN18_SHESW
          Length = 135

 Score = 61.3 bits (148), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 36/78 (46%), Gaps = 1/78 (1%)

Query: 48  EMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSI 107
           +   + +T+  ++   NL D +     LVYP K   S  + SV++ +G++LLG   G+  
Sbjct: 48  DTSSNKITVGRQICLINLQDQQEYQVELVYPQKHKPSAGRFSVISDLGSSLLGRTKGELA 107

Query: 108 HWELPGGVATHLEVLELE 125
              +  G      + ++ 
Sbjct: 108 QVNI-LGKPVLFMIKDVS 124


>UniRef50_Q5QX13 Transcription elongation factor greA/greB family n=1 Tax=Idiomarina
           loihiensis RepID=Q5QX13_IDILO
          Length = 151

 Score = 60.9 bits (147), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 2/93 (2%)

Query: 33  ALNAELDRAQMCSPEE-MPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVM 91
            L+  L+R +    +E +    + + +    RN+   E     LV P      N  +S +
Sbjct: 50  ELSILLNRLEFSESKEALIEKRIRVGASAVLRNVKTMEQVKVRLVPPELADTDNYLVSFI 109

Query: 92  APVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
           +P+G+ LLGLRVGD     +   ++   EVL +
Sbjct: 110 SPLGSTLLGLRVGDIATVIVKD-ISIKWEVLTV 141


>UniRef50_Q2CH34 Putative uncharacterized protein n=2 Tax=Oceanicola
           RepID=Q2CH34_9RHOB
          Length = 155

 Score = 60.1 bits (145), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/125 (24%), Positives = 46/125 (36%), Gaps = 6/125 (4%)

Query: 8   INDLDAERIDILLEQPAYAGLPIADALNAELD---RAQMCSPEEMPHDVVTMNSRVKFRN 64
           +   D   ++ +L        P    LN  L    R    +PE +P  +V     V +  
Sbjct: 30  LTANDRSGVERMLRHRGTKHAPNPALLNGLLRHKLRISQPAPEPVPPTLVVAGCHVTYMI 89

Query: 65  LSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
             +G  R  TLV          +L V   +GA LLG+R    +      G    L VL++
Sbjct: 90  SGEGA-RSGTLVMS--SVPVPGRLLVATLLGATLLGMRKMQKVPLLRDTGEIDTLVVLDV 146

Query: 125 EYQPE 129
              PE
Sbjct: 147 APPPE 151


>UniRef50_Q67NL4 Putative transcription elongation factor n=1 Tax=Symbiobacterium
           thermophilum RepID=Q67NL4_SYMTH
          Length = 154

 Score = 59.7 bits (144), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/108 (24%), Positives = 45/108 (41%), Gaps = 2/108 (1%)

Query: 17  DILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLV 76
           + L            +     L+R      + +  DVV M+  V   + +DG   V T+V
Sbjct: 42  EGLAYSVRPHLRRYVEVAGQLLERMGGPDGDPVD-DVVFMDVPVTLVDETDGTEEVYTVV 100

Query: 77  YPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
            P +   +   +S ++P+G ALL  RV D +  + PGG      +  +
Sbjct: 101 LPEEGDPAKGHISCLSPLGLALLLKRVNDRVVIDAPGGRF-TYRIAAV 147


>UniRef50_C4DVL0 Transcription elongation factor n=1 Tax=Stackebrandtia nassauensis
           DSM 44728 RepID=C4DVL0_9ACTO
          Length = 152

 Score = 59.7 bits (144), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/93 (25%), Positives = 40/93 (43%), Gaps = 4/93 (4%)

Query: 27  GLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNT 86
                + L A LD +   +  +   D+V + S V  R   D       +   A +     
Sbjct: 59  LDARVEKLTARLDASA--TATQGRTDLVDVGSTVTIRFSDDT-TETLHIGEIADVD-DQL 114

Query: 87  QLSVMAPVGAALLGLRVGDSIHWELPGGVATHL 119
            ++  +P+G ALLG R GD++ +  P G AT +
Sbjct: 115 LVTAGSPLGRALLGHRAGDTVSYNTPSGHATAV 147


>UniRef50_C4DV10 Putative uncharacterized protein n=1 Tax=Stackebrandtia nassauensis
            DSM 44728 RepID=C4DV10_9ACTO
          Length = 1498

 Score = 59.7 bits (144), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 40/109 (36%), Gaps = 8/109 (7%)

Query: 20   LEQPAYAGLPIADALNAELDRAQMCS---PEEMPHDVVTMNSRVKFRNLSDG-EVRVRTL 75
             +        +A+ L  EL      +      +  D V + SR++ R L    EV   T+
Sbjct: 1390 ADNATTFKDAVAEELAPELAPLMPTTTNLANRVDADQVAIGSRIRLRFLDGNREVHEGTI 1449

Query: 76   VYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
                        +   +P+G A++G  VGD +   +        EV+ +
Sbjct: 1450 --AEDGDGPT-HIPANSPLGVAIIGAEVGDVVPLLV-DSRIRRFEVVAV 1494


>UniRef50_A0QE66 Transcription elongation factor GreA n=2 Tax=Mycobacterium avium
           complex (MAC) RepID=A0QE66_MYCA1
          Length = 177

 Score = 59.7 bits (144), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 36/105 (34%), Gaps = 3/105 (2%)

Query: 29  PIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQL 88
                L   L  A   S +     V      +  R  + GE     L             
Sbjct: 52  NRIRVLEELLA-AGPGSGDRAAQAVAAPGMVLTIRYDATGETETFLLGRRNGGGGRVKVY 110

Query: 89  SVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQPEAAGD 133
           S+ +P+G ++ G R G+   + +P      + +L++   P A GD
Sbjct: 111 SMASPLGRSVAGARPGEQRIYAIPNDTGRVVTLLKVV--PYAGGD 153


>UniRef50_B9ZS32 GreA/GreB family elongation factor n=1 Tax=Thioalkalivibrio sp.
           K90mix RepID=B9ZS32_9GAMM
          Length = 137

 Score = 59.4 bits (143), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 32/78 (41%), Gaps = 2/78 (2%)

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
           V+     V+  +L   E  +  L  P        ++S+++P+G+ LLGLR        L 
Sbjct: 58  VIQTGCCVRLLDLQTEETYLVELCEPEHAQPERGKISILSPLGSRLLGLRKNSLAEITLL 117

Query: 113 GGVAT--HLEVLELEYQP 128
                   +E+L   + P
Sbjct: 118 RSRLRFLVIEILAPGHDP 135


>UniRef50_Q0BS89 Transcription elongation factor greB n=1 Tax=Granulibacter
           bethesdensis CGDNIH1 RepID=Q0BS89_GRABC
          Length = 164

 Score = 59.0 bits (142), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 13/98 (13%), Positives = 25/98 (25%), Gaps = 12/98 (12%)

Query: 6   IIINDLDAERID-ILLEQ---------PAYAGLPIADALNAELDRAQMCSPEEMPHDVVT 55
           +   + +  R+   L E+                      A    AQ+        + V 
Sbjct: 35  LTAIEAEIARLQTALAEEKQSTVEESERRAVLARDLRYWLARRASAQLVPTAPENAEEVA 94

Query: 56  MNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAP 93
               VK +    G      +V   +       +S  +P
Sbjct: 95  FGDTVKLKL--GGRTVTYRIVGEDEADPKQGLISYASP 130


>UniRef50_D0M044 Transcription elongation factor n=15 Tax=Vibrionales
           RepID=D0M044_VIBSE
          Length = 159

 Score = 59.0 bits (142), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 21/125 (16%), Positives = 42/125 (33%), Gaps = 10/125 (8%)

Query: 7   IINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLS 66
            + +   + + +     A+           EL + +     +     V + + V   + +
Sbjct: 37  TVPEHKYDTLALEAAYLAHGQAMRIQESEDELRQYRALVTRDFKGAPVGVGAYVVLADEN 96

Query: 67  DGEVRVRTLVYPAKMTDSNTQ-------LSVMAPVGAALLGLRVGDSIHWELPGGVATHL 119
             E      V P     +          L+  +P+G AL G   GD I  ++ G   T  
Sbjct: 97  LLEKHFF--VGPCSGGLTVKYQAQEVFVLTAKSPLGRALFGKEEGDEIDVKI-GEKTTCY 153

Query: 120 EVLEL 124
           EV+ +
Sbjct: 154 EVVTV 158


>UniRef50_Q1DFU3 GreA/GreB domain protein n=3 Tax=Myxococcales RepID=Q1DFU3_MYXXD
          Length = 171

 Score = 57.4 bits (138), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 44/126 (34%), Gaps = 17/126 (13%)

Query: 13  AERIDILLEQPAYAGLPIADALNA--ELDRAQMCSPEEMPHDVVTMNSRVKF--RNLSDG 68
           A     L    A     + + L A  +  +A++  P       V + + V     +    
Sbjct: 50  ALEFGSLATGQAQRARRVQEELQALTKFGQAEV--PRFPRQGPVALGAIVDVSTEDEEGF 107

Query: 69  EVRVRTLVYPAKM---------TDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHL 119
             R    V PA               + ++  +PVG AL+G + GD++   L  G     
Sbjct: 108 SERTFF-VLPAGAGTELTGPGGDGFLSVITPASPVGRALMGRKAGDTVEVML-AGEVREW 165

Query: 120 EVLELE 125
            VLE+ 
Sbjct: 166 TVLEVA 171


>UniRef50_D1CSU3 Transcription elongation factor (Fragment) n=1 Tax=Sinorhizobium
           fredii RepID=D1CSU3_RHIFR
          Length = 109

 Score = 55.9 bits (134), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 36/93 (38%), Positives = 51/93 (54%), Gaps = 1/93 (1%)

Query: 38  LDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAA 97
           L RA++CSP ++P DVVT+NSRV F  +  G  R   LV        N  +SV + +G  
Sbjct: 1   LVRAEICSPRKVPDDVVTINSRVTFC-VDGGVPRTANLVRNESQDFPNYTVSVESLLGLG 59

Query: 98  LLGLRVGDSIHWELPGGVATHLEVLELEYQPEA 130
           LLGLR G +I  E   G    + V+ +++Q  A
Sbjct: 60  LLGLRAGRAIAVETEAGGLQKVNVIRIDFQALA 92


>UniRef50_C1YJ21 Transcription elongation factor n=3 Tax=Actinomycetales
           RepID=C1YJ21_NOCDA
          Length = 162

 Score = 55.5 bits (133), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 19/106 (17%), Positives = 35/106 (33%), Gaps = 4/106 (3%)

Query: 22  QPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKM 81
                       +   L  A +         +      +  R   + E  V  L+     
Sbjct: 51  HDPAVRQARVHTIERLLSEA-VVDEAAPDDGIAAPGKVLTIRYDGEEEDEVF-LLGVRDA 108

Query: 82  TDSNT--QLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
           + ++     S  +P+GAAL+G R G+   +  P G    + +L  E
Sbjct: 109 SVADRMTVYSPESPLGAALVGARQGERRTFTAPRGAVIGVTLLRAE 154


>UniRef50_B1ZXU0 GreA/GreB family elongation factor n=1 Tax=Opitutus terrae PB90-1
           RepID=B1ZXU0_OPITP
          Length = 204

 Score = 54.7 bits (131), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 25/157 (15%), Positives = 57/157 (36%), Gaps = 22/157 (14%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPI-ADALNAEL---------DRAQMCSPEEM- 49
           + R  ++++ ++A     L E   +        A++ ++         +  +   P    
Sbjct: 38  VKRAALVLDKIEAHSQGDLRENFGFKAAKEAIRAVDRKMMALDRFVARNTFKEVDPAAWL 97

Query: 50  --PHDVVTMN--SRVKFRNLSDGEVRVRT-LV---YPAKMTDSNTQ--LSVMAPVGAALL 99
               D + +   + ++ ++++       T LV           +    L   +P+  A+L
Sbjct: 98  TKSTDTLQLGHVTTIEKQDVTTKRTHSFTFLVTTYGETASDPDSGLECLPHTSPLATAVL 157

Query: 100 GLRVGDSIHWELPGGVATHLEVLELEYQPEAAGDYLL 136
           GL  G      LP G +  L ++ +    +A  D LL
Sbjct: 158 GLAAGAQTKVMLPAGESL-LTLISIRNPTQAELDRLL 193


>UniRef50_A9EFU2 Nucleoside diphosphate kinase regulator n=1 Tax=Oceanibulbus
           indolifex HEL-45 RepID=A9EFU2_9RHOB
          Length = 149

 Score = 54.7 bits (131), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 45/127 (35%), Gaps = 10/127 (7%)

Query: 3   RPTIIINDLD---AERIDILLEQPAYAGLPIAD-ALNAELDRAQMCSPEEMPHDVVTMNS 58
           R    +   D    ER+  L          + +  L+ +L  A+  +PE  P ++V    
Sbjct: 25  RSRFQLTRADRIGVERLLSLGLTAECPNPALIEGFLHHKLRLAR-PAPEPTPANLVVAGR 83

Query: 59  RVKFRNLSDGEVR-VRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVAT 117
            V F          V T V      +    + V + +GA +LG++           G   
Sbjct: 84  LVSFMTHGGRARSGVLTFV----PDNDAGCIPVTSFLGATMLGMQKLQRAPLLREDGWID 139

Query: 118 HLEVLEL 124
            L VL++
Sbjct: 140 TLIVLDV 146


>UniRef50_Q4K8S4 Putative uncharacterized protein n=1 Tax=Pseudomonas fluorescens
           Pf-5 RepID=Q4K8S4_PSEF5
          Length = 139

 Score = 53.6 bits (128), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 16/126 (12%), Positives = 37/126 (29%), Gaps = 11/126 (8%)

Query: 8   INDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDV-VTMNSRVKFRNLS 66
           I +   + + +     A       + +   L   Q  S         + + + +   + +
Sbjct: 17  IAENKYDTLGLEASYLAAGQARRVEEIRQALGLWQNLSLRPYDPQKGIQIGALLGLEDEN 76

Query: 67  DGEVRVRTLVYPAKMTDSNTQ-------LSVMAPVGAALLGLRVGDSIHWELPGGVATHL 119
             E      + P                ++  +P+G +LLG    D +   +  G     
Sbjct: 77  GHEQ--WLFLGPDGAGLKVYVVGQLVTVITPRSPLGKSLLGKFEDDEVEIVV-AGARQQF 133

Query: 120 EVLELE 125
            V E+ 
Sbjct: 134 TVTEVR 139


>UniRef50_Q0VMM9 Putative uncharacterized protein n=2 Tax=Alcanivorax
           RepID=Q0VMM9_ALCBS
          Length = 144

 Score = 52.8 bits (126), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/96 (25%), Positives = 40/96 (41%), Gaps = 1/96 (1%)

Query: 33  ALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMA 92
            L   +++ +M    E       +  RV   +L D E     L    K    N  LSV++
Sbjct: 32  RLMEVMEKIEMLRGVESDLAAAAVGDRVFLFSLEDEEQMSFILAEAGKRPLDNKDLSVLS 91

Query: 93  PVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQP 128
           P+GAALLG   G  ++ +   G      +L+++   
Sbjct: 92  PLGAALLGSLPGAVVNVDF-LGHRHRYLLLKVKKPA 126


>UniRef50_Q39Z43 GreA/GreB family elongation factor n=18 Tax=Proteobacteria
           RepID=Q39Z43_GEOMG
          Length = 160

 Score = 52.8 bits (126), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 42/126 (33%), Gaps = 11/126 (8%)

Query: 7   IINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDV-VTMNSRVKFRNL 65
            I D   +   +     A      A  +   L+  ++ +  E   +  + + + V   + 
Sbjct: 37  CIPDNKYDTTALEASYVAQGQANRAQEIRMALESYRVLALREFDDETPIRLTALVILEDE 96

Query: 66  SDGEVRVRTLVYPAKMTDSNT-------QLSVMAPVGAALLGLRVGDSIHWELPGGVATH 118
                RV   + P                ++  +P+G  LLG  VGD +     GG    
Sbjct: 97  DGEARRVF--LGPEAGGLKIADGEGEIVVITPQSPLGRVLLGKVVGDQLQ-AGMGGTRKT 153

Query: 119 LEVLEL 124
             V+E+
Sbjct: 154 FTVVEV 159


>UniRef50_A3M8R9 Putative uncharacterized protein n=2 Tax=Acinetobacter baumannii
           ATCC 17978 RepID=A3M8R9_ACIBT
          Length = 1250

 Score = 52.4 bits (125), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 14/93 (15%), Positives = 34/93 (36%), Gaps = 17/93 (18%)

Query: 33  ALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQ-LSVM 91
               EL  AQ+              + + ++  +  E +   ++   +    + + +S  
Sbjct: 739 FFEEELTNAQI-------------GTAITYKLKNMTETK---IIDFDESLPRDNEFISYE 782

Query: 92  APVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
           + +   L+G +VGD    +   G     E+ E+
Sbjct: 783 SELAKNLIGKKVGDKFTIQGTFGFENEYEITEI 815


>UniRef50_B2IF32 DNA helicase, putative n=2 Tax=Rhizobiales RepID=B2IF32_BEII9
          Length = 1649

 Score = 52.0 bits (124), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 35/78 (44%), Gaps = 2/78 (2%)

Query: 45   SPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVG 104
              +    + + +  RV  + L D +    T+    +   +N  LSV +P+G+ LLG    
Sbjct: 1568 EGKPPSPEGIRIGDRVIIQYLDDHKTMSFTITKDKE-DYANGFLSVGSPLGSQLLGAVED 1626

Query: 105  DSIHWELPGGVATHLEVL 122
            + I +E   G A  + ++
Sbjct: 1627 EEIAFE-ESGRARPVLIV 1643


>UniRef50_C7MX98 Transcription elongation factor n=1 Tax=Saccharomonospora viridis
           DSM 43017 RepID=C7MX98_SACVD
          Length = 154

 Score = 51.3 bits (122), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 49/120 (40%), Gaps = 10/120 (8%)

Query: 12  DAERIDILLEQPA--YAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGE 69
           D+     L+E+           + +   L   Q+ +  E         ++V  R   DG 
Sbjct: 40  DSADQADLVERSEVVSRLDRRINEVVDLL-HGQISTESEGGLPS---GTKVTLRF-DDGS 94

Query: 70  VRVRTLVY-PAKMTDSN-TQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQ 127
           V    +V   A+  + + + L+  +P+G AL G + GD++ +  P G     E+++L   
Sbjct: 95  VEDMVVVGVAAEADEDDTSTLTADSPLGQALAGHQEGDTVTYRTPKGE-VTAEIVKLTPP 153


>UniRef50_Q3A1F8 GreA/GreB family elongation factor n=4 Tax=Desulfuromonadales
           RepID=Q3A1F8_PELCD
          Length = 185

 Score = 51.3 bits (122), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/126 (15%), Positives = 41/126 (32%), Gaps = 12/126 (9%)

Query: 8   INDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDV-VTMNSRVKFRNLS 66
           I D     + +     A      A  +   L   +  + +    +  +   + V+  +  
Sbjct: 64  IPDNKYATLGLEASYLAQGYANRAQEIRHALQAFRQLTLQRFSENSPIRQTALVQLEDEE 123

Query: 67  DGEVRVRTLVYPAKMTDSNT-------QLSVMAPVGAALLGLRVGDSIHWELPGGVATHL 119
               R    + PA      +        ++  +P+G ALLG + GD +      G     
Sbjct: 124 G--QRRWLFLGPAAGGLRLSFGKREVMVITPASPLGKALLGKQCGDLVEIAGDVG--REY 179

Query: 120 EVLELE 125
           E++ + 
Sbjct: 180 EIVSIA 185


>UniRef50_A4VNK9 Transcription elongation factor n=1 Tax=Pseudomonas stutzeri A1501
           RepID=A4VNK9_PSEU5
          Length = 158

 Score = 50.9 bits (121), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 14/125 (11%), Positives = 32/125 (25%), Gaps = 11/125 (8%)

Query: 8   INDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSD 67
             +   +   +     A         +   L   +           V + + +       
Sbjct: 38  KAENKYDTRGLEAAYLADGQRRRLHEIETALAAYRNLQAGVSSDGRVRVGALLCL---DH 94

Query: 68  GEVRVRTLVYPAKMTDSNTQ-------LSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
                   + P                ++  +P+G  LLG  + D +   +  G     E
Sbjct: 95  DGAERWFFLGPDAAGLKLQHDGREILVITARSPLGQGLLGRELRDEVELRV-HGQLQRYE 153

Query: 121 VLELE 125
           VL++ 
Sbjct: 154 VLQIA 158


>UniRef50_P65095 Uncharacterized protein Rv3788/MT3896 n=17 Tax=Mycobacterium
           RepID=Y3788_MYCTU
          Length = 161

 Score = 50.9 bits (121), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 44/120 (36%), Gaps = 11/120 (9%)

Query: 12  DAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMN-SRVKFRNLSDGEV 70
           DA       ++ A  G    + L+  L       P            + V  R    GEV
Sbjct: 48  DAAEAIQRADELAILGDR-INELDRRLRT----GPTPWSGSETLPGGTEVTLRFPD-GEV 101

Query: 71  RVRTLVYPAKMTD---SNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQ 127
               ++   + T        L+  +P+G AL G + GD++ +  P G    +++L ++  
Sbjct: 102 VTMHVISVVEETPVGREAETLTARSPLGQALAGHQPGDTVTYSTPQGPNQ-VQLLAVKLP 160


>UniRef50_A5W772 GreA/GreB family elongation factor n=5 Tax=Proteobacteria
           RepID=A5W772_PSEP1
          Length = 258

 Score = 50.9 bits (121), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/108 (15%), Positives = 36/108 (33%), Gaps = 10/108 (9%)

Query: 8   INDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDV-VTMNSRVKFRNLS 66
           I +   + + +     A      +  +   L   Q     +      V +++ V   N  
Sbjct: 140 IAENKYDTLGLEASYLATGQARRSAEIRQALVIYQQLLLRDYDPARGVQVSNLVTLENED 199

Query: 67  DGEVRVRTLVYPAKMTDSNTQ-------LSVMAPVGAALLGLRVGDSI 107
             + R+   + P        +       ++  +P+G  LLG RV D +
Sbjct: 200 GAQRRLF--LGPEAAGLKIGEGDGLVTVITPRSPLGQQLLGKRVDDEV 245


>UniRef50_A2VH02 Transcription elongation factor greA (Transcript cleavage factor
          greA ) (Fragment) n=1 Tax=Mycobacterium tuberculosis C
          RepID=A2VH02_MYCTU
          Length = 110

 Score = 50.1 bits (119), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 17/71 (23%), Gaps = 9/71 (12%)

Query: 2  SRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHDV 53
          +RP I     D      L E   Y                L   L  A++         V
Sbjct: 27 NRPVIAAEINDRREEGDLRENGGYHAAREEQGQQEARIRQLQDLLSNAKV-GEAPKQSGV 85

Query: 54 VTMNSRVKFRN 64
              S VK   
Sbjct: 86 ALPGSVVKVYY 96


>UniRef50_A1AQR3 GreA/GreB family elongation factor n=4 Tax=Desulfuromonadales
           RepID=A1AQR3_PELPD
          Length = 172

 Score = 50.1 bits (119), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 16/125 (12%), Positives = 43/125 (34%), Gaps = 10/125 (8%)

Query: 8   INDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDV-VTMNSRVKFRNLS 66
           + +   + + +     A         +   +   +  +      D  + + + V  R   
Sbjct: 49  VPENKYDTMGLEASYVAQGQANRGQEIRQAVQEYRFLTLHPFDDDSPIRLTALVTLRAGD 108

Query: 67  DGEVRVRTLVYPAKMTD---SNTQ----LSVMAPVGAALLGLRVGDSIHWELPGGVATHL 119
           DG  +   +  P +         +    ++  +P+G +L+G + GD I      G     
Sbjct: 109 DGTAKNVFI-GPREGGLKVMDQGEEVMVITPASPLGRSLIGRQQGDCIETGSGAG-IREY 166

Query: 120 EVLEL 124
           E++++
Sbjct: 167 EIVQV 171


>UniRef50_UPI0001AEE145 nucleoside diphosphate kinase regulator n=1 Tax=Streptomyces albus
           J1074 RepID=UPI0001AEE145
          Length = 160

 Score = 49.3 bits (117), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/140 (22%), Positives = 51/140 (36%), Gaps = 14/140 (10%)

Query: 2   SRPTIIINDLD----AERIDILLEQPA-----YAGLPIADALNAELDRAQMCSPEEMPHD 52
            R T+     D    A       +Q              + +   L +A        P  
Sbjct: 26  ERETVAATLQDPDIVAGDRGDAADQLQRSGDLARLDARIEDITTRLRQAD--DAGPPPAG 83

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
           VV + S V  R   DG  +  ++          + ++  +P+G AL+G R GD++ +  P
Sbjct: 84  VVGVGSTVTVRF-DDGAEQTVSI-GEVTQGYDASLVTADSPLGKALMGCRPGDAVRYRTP 141

Query: 113 GGVATHLEVLELEYQPEAAG 132
            G A  + V+ L   P A G
Sbjct: 142 DGEAGAV-VVSLGGAPPAQG 160


>UniRef50_Q0F3H5 GreA/GreB family elongation factor n=1 Tax=Mariprofundus
           ferrooxydans PV-1 RepID=Q0F3H5_9PROT
          Length = 161

 Score = 47.4 bits (112), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/122 (15%), Positives = 38/122 (31%), Gaps = 7/122 (5%)

Query: 7   IINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLS 66
            +     E + +     A         +   L   +  S    P  V+ ++S V   +  
Sbjct: 40  CLGSSKYETMGLEASYLAQGQGKRLLEVERALAYFEQLSL-PAPSPVIGLSSLVVLADEH 98

Query: 67  DGEVRVRTLVYP-----AKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
             +  +                  T ++V +P+G+AL+G   GD     +  G      V
Sbjct: 99  HEQRYLWLAADAGGLKIDYADTPITIITVKSPLGSALVGKAAGDEFEICI-AGKTRAYTV 157

Query: 122 LE 123
           + 
Sbjct: 158 VS 159


>UniRef50_Q1MZY3 Putative uncharacterized protein n=1 Tax=Bermanella marisrubri
           RepID=Q1MZY3_9GAMM
          Length = 155

 Score = 46.6 bits (110), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 15/123 (12%), Positives = 39/123 (31%), Gaps = 10/123 (8%)

Query: 8   INDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMP-HDVVTMNSRVKFRNLS 66
             +   + + +     A+      D L  ++ R            D + + + V+  N  
Sbjct: 38  KAETQYDTLGLEQAYLAHGQSERIDNLQQQIARLNHFDLRTFDEDDEIHLGAFVQLINSQ 97

Query: 67  DGEVRVRTLVYPAKMTDSNTQ----LSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVL 122
             +     ++ P     +  +    L+   P+  A++GL + D        G      + 
Sbjct: 98  TNKNLDVFIL-PCAGGYTLEKSIHTLTPDTPIAKAIMGLGIDDEFKL----GNGQRYRIT 152

Query: 123 ELE 125
           ++ 
Sbjct: 153 KVS 155


>UniRef50_A8H435 GreA/GreB family elongation factor n=2 Tax=Shewanella
           RepID=A8H435_SHEPA
          Length = 170

 Score = 46.3 bits (109), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 15/108 (13%), Positives = 32/108 (29%), Gaps = 13/108 (12%)

Query: 28  LPIADALNA---ELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDS 84
                A  A    L+   +   +      V +   V   + +         V P      
Sbjct: 66  QADIRAFEAMFTRLNSNSIIESKGTKEPKVELGRLVLLMDENGKNQ--YLFVGPGAGGLK 123

Query: 85  NTQ-------LSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
                     +++ +P+G  +   R GD     +  G     E++E++
Sbjct: 124 IAYEHDSIMVVTLESPLGITMANKRQGDDFSLNV-AGNKREYEIIEVK 170


>UniRef50_UPI0001B57B91 nucleoside diphosphate kinase regulator n=1 Tax=Streptomyces sp.
           AA4 RepID=UPI0001B57B91
          Length = 152

 Score = 46.3 bits (109), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 46/130 (35%), Gaps = 14/130 (10%)

Query: 2   SRPTIIINDLDAERIDILLEQPAY--AGLPIADALNAELDRAQMCSPEEMPHDVVTMNSR 59
            +P       DA     ++++             + A+L+         +P       +R
Sbjct: 33  PQPGEQERTGDAADQADVIDRAEAAARLDRQIADVTAKLEHGA-YDSSLLPD-----GTR 86

Query: 60  VKFRNLSDGEVRVRTLV-YPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATH 118
           V  R    G+    T+V  P +       ++  +P+G AL   + G+ I +  P G A  
Sbjct: 87  VSLRFSD-GDEEEFTVVTLPGE---DADAITSDSPLGLALATAKAGEEISYRTPRGQA-T 141

Query: 119 LEVLELEYQP 128
             VL+L    
Sbjct: 142 ATVLKLTPPA 151


>UniRef50_B6EH16 Putative uncharacterized protein n=1 Tax=Aliivibrio salmonicida
           LFI1238 RepID=B6EH16_ALISL
          Length = 173

 Score = 46.3 bits (109), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 46/128 (35%), Gaps = 12/128 (9%)

Query: 7   IINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMN--SRVKFRN 64
            I     E   +     A+         +A++   +     E   D V +N  + V   N
Sbjct: 49  AIARSKYETFGLEASYLAHGQARRVSECDADILAYRKLPRLEYGEDSV-INQCALVTLVN 107

Query: 65  LSDGEVRVRTL-------VYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVAT 117
             D E +   +       V       +   ++  AP+G A++G ++GD    +L  G   
Sbjct: 108 QDDIESQ-FFIGPSAGGGVKVTHEDMTFLLITPSAPLGKAMIGKQLGDEFELDL-SGRKQ 165

Query: 118 HLEVLELE 125
             E++ ++
Sbjct: 166 QYEIIGVQ 173


>UniRef50_A6VXC9 GreA/GreB family elongation factor n=2 Tax=Marinomonas
           RepID=A6VXC9_MARMS
          Length = 163

 Score = 44.7 bits (105), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 27/83 (32%), Gaps = 9/83 (10%)

Query: 51  HDVVTMNSRVKFRNLSDG-EVRVRTLVYPAKMTDSNTQL-------SVMAPVGAALLGLR 102
             V+ +   V    L           + P     +   +       +  +PVG  LLG  
Sbjct: 82  EGVIDLWCLVTLTELESSCGTEKYFFISPCAGGLTIEIIEKKVCLVTPFSPVGKKLLGKV 141

Query: 103 VGDSIHWELPGGVATHLEVLELE 125
           VGD +   L  G     E+  +E
Sbjct: 142 VGDEVEL-LQNGKQMAYEITTIE 163


>UniRef50_C0A4E5 Putative uncharacterized protein n=1 Tax=Opitutaceae bacterium TAV2
           RepID=C0A4E5_9BACT
          Length = 193

 Score = 43.9 bits (103), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/129 (14%), Positives = 36/129 (27%), Gaps = 12/129 (9%)

Query: 8   INDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSD 67
             +   +         A     +A  +   ++  +  S        V   S V+  + + 
Sbjct: 66  KPENKYDMHSQEAAYLAEGQARLAGEIARAIESYRALSLA-TSATHVETGSLVRLEDTAT 124

Query: 68  GEVRVRTL----------VYPAKMT-DSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVA 116
                  +          V          T L+  AP+G  LLG  +GD I      G  
Sbjct: 125 RRPIHYFIGPQRGGLTLTVAARDGRSVEITVLTPAAPLGRQLLGHTLGDEISLPGRRGKT 184

Query: 117 THLEVLELE 125
               + ++ 
Sbjct: 185 APARITQIS 193


>UniRef50_B5FBA9 Transcription elongation factor n=2 Tax=Vibrio fischeri
           RepID=B5FBA9_VIBFM
          Length = 161

 Score = 43.9 bits (103), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/74 (20%), Positives = 30/74 (40%), Gaps = 8/74 (10%)

Query: 58  SRVKFRNLSDGEVRVRTL------VYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWEL 111
           + V   N  D       +      V  A      + ++  AP+G A++G ++GD     L
Sbjct: 90  ALVTLVNQDD-VESTFFIGPSAGGVKVAHQDLVFSLITPSAPLGKAIIGQQLGDEFELNL 148

Query: 112 PGGVATHLEVLELE 125
             G     E+++++
Sbjct: 149 -AGKKQQYEIIDVQ 161


>UniRef50_A6D862 Putative uncharacterized protein n=1 Tax=Vibrio shilonii AK1
           RepID=A6D862_9VIBR
          Length = 158

 Score = 43.6 bits (102), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/109 (13%), Positives = 39/109 (35%), Gaps = 8/109 (7%)

Query: 7   IINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPH-DVVTMNSRVKFRNL 65
            + +   + + +     A+      + + +++   +          D V + + V+  + 
Sbjct: 37  TVPEHKYDTLALEASYLAHGQAVRLEQVKSDIALLRKMVLNPFSSLDNVRLATVVEIEDE 96

Query: 66  SDGEVRVRTLVYPAKMT-----DSNTQLSVMAPVGAALLGLRVGDSIHW 109
              EV  R  V P          +   ++  +P+G AL+G  + D +  
Sbjct: 97  D--EVVSRFFVLPCAGGLTIEEPTIKVVTPHSPLGRALIGKSIDDEVVV 143


>UniRef50_B8CMM7 Transcription elongation factor n=1 Tax=Shewanella piezotolerans
           WP3 RepID=B8CMM7_SHEPW
          Length = 190

 Score = 43.2 bits (101), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/101 (17%), Positives = 38/101 (37%), Gaps = 12/101 (11%)

Query: 32  DALNAELD-RAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNT---- 86
           + L + L  RA   S  ++P   + +   V+  +  D  +     + P            
Sbjct: 93  EQLFSLLKHRALNESDSDIPL-QIALGHLVELVDEQD--IVSLLFMGPNAGGLKIDFAKC 149

Query: 87  ---QLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
               ++  +P+G  L+   VGD +   +  G   H E++ +
Sbjct: 150 NFMLITPQSPIGEKLMSREVGDEVSINV-AGKRHHYEIVGI 189


>UniRef50_B2A7T5 Putative uncharacterized protein n=1 Tax=Natranaerobius
           thermophilus JW/NM-WN-LF RepID=B2A7T5_NATTJ
          Length = 303

 Score = 42.4 bits (99), Expect = 0.004,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 29/73 (39%), Gaps = 4/73 (5%)

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWEL-- 111
           +T+  +V  ++L D  +    L            +S  +PVG  L+G   G+ I  E+  
Sbjct: 95  ITIEDQVTIKDLLDDNIFQFKL-TENNKDTEIKTISPKSPVGQKLIGKTYGEIIEVEVST 153

Query: 112 -PGGVATHLEVLE 123
                    +VL+
Sbjct: 154 IGKKELNKYKVLD 166


>UniRef50_Q1K1G0 GreA/GreB family elongation factor n=1 Tax=Desulfuromonas
           acetoxidans DSM 684 RepID=Q1K1G0_DESAC
          Length = 159

 Score = 42.4 bits (99), Expect = 0.005,   Method: Composition-based stats.
 Identities = 18/126 (14%), Positives = 40/126 (31%), Gaps = 12/126 (9%)

Query: 7   IINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEE-MPHDVVTMNSRVKFRNL 65
              D   + + +     A      A  L   LD  +    +   P++   + + V     
Sbjct: 37  TQPDNKYDTLALESSYIAQGHANRAQQLKKALDVYKKLEIQSFAPYEPFYLTALVGIEYE 96

Query: 66  SDGEVRVRTLVYPAKMTDSNTQ-------LSVMAPVGAALLGLRVGDSIHWELPGGVATH 118
                ++   + P                ++  +P+ +ALLG +VGD +           
Sbjct: 97  DGRLRQLF--LGPEAGGLKVDCDGENVVVITPGSPLCSALLGKQVGDVVS--SGRATDKE 152

Query: 119 LEVLEL 124
            E++ +
Sbjct: 153 FEIISV 158


>UniRef50_C0BIS2 GreA/GreB family elongation factor n=1 Tax=Flavobacteria bacterium
           MS024-2A RepID=C0BIS2_9BACT
          Length = 148

 Score = 42.4 bits (99), Expect = 0.005,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 31/74 (41%), Gaps = 11/74 (14%)

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYP-AKMTDSNTQ-LSVMAPVGAALLGLRVGDSIHWEL 111
           V++ S V    L+D E    ++     ++       +S  +P+G  L+G +V D I +  
Sbjct: 84  VSLGSVV----LTDKENYYISIATNFCEIDAKKYYCISAQSPIGKLLIGKKVNDKIEFN- 138

Query: 112 PGGVATHLEVLELE 125
                    +LE+ 
Sbjct: 139 ----KRLSTILEIR 148


>UniRef50_B4D7C3 GreA/GreB family elongation factor n=1 Tax=Chthoniobacter flavus
           Ellin428 RepID=B4D7C3_9BACT
          Length = 159

 Score = 42.0 bits (98), Expect = 0.006,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 46/120 (38%), Gaps = 19/120 (15%)

Query: 19  LLEQPAYAGLPIADALNAELDRAQM----CSPEEMPHDV-VTMNSRVKFRNLSDGEVRVR 73
              + +Y     +  L  EL++A+         + P    V + + +  +N    +V   
Sbjct: 46  RALEASYLARGQSRQLI-ELEKAKQEFESLDSADWPPKTPVEIGALLTLKNGPAEDVY-- 102

Query: 74  TLVYPAKMTDSN-------TQLSVMAPVGAALLGLRVGDSIHWELPGGV-ATHLEVLELE 125
            L+ P              T ++  +P+G  L+G   GDSI   LP G      ++L ++
Sbjct: 103 -LLGPRAGGIEVVCEGTPVTVITPQSPIGQLLIGKVAGDSIA--LPQGREQRRFKILRVQ 159


>UniRef50_A8FVY8 Putative uncharacterized protein n=1 Tax=Shewanella sediminis
           HAW-EB3 RepID=A8FVY8_SHESH
          Length = 168

 Score = 41.6 bits (97), Expect = 0.008,   Method: Composition-based stats.
 Identities = 11/86 (12%), Positives = 29/86 (33%), Gaps = 18/86 (20%)

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKM---------------TDSNTQLSVMAPVGAAL 98
           + + + V   +  D E  +   + P                        ++  +P+G AL
Sbjct: 85  IGLGALVVIMDEKDDEQSLF--IGPGAGGVKFSMKVDNQALAEDVEVMVITPSSPLGNAL 142

Query: 99  LGLRVGDSIHWELPGGVATHLEVLEL 124
           +G  + D++   +        E++ +
Sbjct: 143 MGRMLDDTVVINIGDNR-KEYEIIAV 167


>UniRef50_D1SQ94 Putative uncharacterized protein n=1 Tax=Acidovorax avenae subsp.
           avenae ATCC 19860 RepID=D1SQ94_9BURK
          Length = 1383

 Score = 41.2 bits (96), Expect = 0.009,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 31/91 (34%), Gaps = 8/91 (8%)

Query: 41  AQMCSPEEMP-----HDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMT--DSNTQLSVMAP 93
           A +  P+E+P        V   + V  +N   GE    +L              L+    
Sbjct: 775 AIIAGPQELPFMEEELTEVQPGTAVTLKN-ELGETVTLSLDPAGLSGLPVREGMLAPSDD 833

Query: 94  VGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
           V  +LLG+ VG  +    P G      V  +
Sbjct: 834 VARSLLGVAVGQQVSLPGPFGTELRFVVEGV 864


>UniRef50_A1SXZ5 GreA/GreB family elongation factor n=5 Tax=Gammaproteobacteria
           RepID=A1SXZ5_PSYIN
          Length = 160

 Score = 40.9 bits (95), Expect = 0.011,   Method: Composition-based stats.
 Identities = 21/125 (16%), Positives = 41/125 (32%), Gaps = 11/125 (8%)

Query: 8   INDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDV-VTMNSRVKFRNLS 66
           + +   + + +     A            +L   Q  +       + V + + V   +L 
Sbjct: 38  VAENKYDTLALEASYLAQGQAQRVAECAQDLIAFQQLNISAASLKLSVCLGALVLLHDLD 97

Query: 67  DGEVRVR-------TLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHL 119
           D E  V          V  A+       ++  +P+GAA+    VGD I   +        
Sbjct: 98  DNEKYVFYGPSAGGLKVQFAEKDIV--VVTPGSPLGAAIKDRSVGDEISLFIGN-KVIEY 154

Query: 120 EVLEL 124
           E+ E+
Sbjct: 155 EIAEI 159


>UniRef50_A5F491 Putative uncharacterized protein n=31 Tax=Vibrio RepID=A5F491_VIBC3
          Length = 163

 Score = 40.9 bits (95), Expect = 0.012,   Method: Composition-based stats.
 Identities = 13/81 (16%), Positives = 27/81 (33%), Gaps = 1/81 (1%)

Query: 46  PEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGD 105
           P E     + +   V   +         TL       +    ++  + +GAALLG R  +
Sbjct: 67  PIERAPQRIKLGDTVSLVDAHRQLSFQVTLTTSENQHEVQGGVTCDSLLGAALLGRRQHE 126

Query: 106 SIHWELPGGVATHLEVLELEY 126
                +  G      +  +++
Sbjct: 127 VFTLSI-WGQPHCFAITHVQH 146


>UniRef50_A4CAX2 Putative uncharacterized protein n=1 Tax=Pseudoalteromonas tunicata
           D2 RepID=A4CAX2_9GAMM
          Length = 161

 Score = 39.7 bits (92), Expect = 0.029,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 46/125 (36%), Gaps = 11/125 (8%)

Query: 8   INDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEM-PHDVVTMNSRVKFRNLS 66
           + +   + + +     A          + E++  +     E  P D + + + V+  N +
Sbjct: 39  VAETQYDTLGLESAYLAEGLGRRVVMYHQEMNAYKQLVLREFGPDDAIKVGALVQLGN-N 97

Query: 67  DGEVRVRTLVYPAK-------MTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHL 119
           +G V+      P              T ++  AP+GAAL+G  + D +   +  G     
Sbjct: 98  EGVVQTLFF-GPCSGGLIITLAGQKVTVITPSAPLGAALVGKYLDDEVTIMV-AGKKQTW 155

Query: 120 EVLEL 124
            + ++
Sbjct: 156 SIDKV 160


>UniRef50_C6X1H7 Putative uncharacterized protein n=2 Tax=Flavobacteriaceae
           RepID=C6X1H7_FLAB3
          Length = 149

 Score = 39.7 bits (92), Expect = 0.032,   Method: Composition-based stats.
 Identities = 18/107 (16%), Positives = 32/107 (29%), Gaps = 10/107 (9%)

Query: 7   IINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLS 66
           I      + I   +++  Y       ALN              P + V + S V      
Sbjct: 40  IKKTPKYDSIREEIQEEIYRMQRQLGALNDMQRNMTKVLNS--PTERVQIGSVVF----- 92

Query: 67  DGEVRVRTLVYPAKMTDSNTQ---LSVMAPVGAALLGLRVGDSIHWE 110
             + R    V   +      +   +S  +P+   + G + GDS    
Sbjct: 93  TNKARFYISVSLGEFFFEGDRFYAISEESPMAKTMFGKQAGDSFVLN 139


>UniRef50_B9X9L2 Putative uncharacterized protein n=1 Tax=bacterium Ellin514
           RepID=B9X9L2_9BACT
          Length = 159

 Score = 39.3 bits (91), Expect = 0.033,   Method: Composition-based stats.
 Identities = 14/126 (11%), Positives = 41/126 (32%), Gaps = 14/126 (11%)

Query: 8   INDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDV-VTMNSRVKFRNLS 66
             +   +   +     A         +   +   +  +P     +  + + + V+    +
Sbjct: 38  KAENKYDTRGLEAAYLAGGQARQVKEIMESIKIYEAMAPRNFGAEEPIDLAALVELE--A 95

Query: 67  DGEVRVRTLVYPAKMTDSNTQ-------LSVMAPVGAALLGLRVGDSIHWELP-GGVATH 118
           DG   +  +  P                ++  +P+G+ L+G + G    W+   GG   +
Sbjct: 96  DGSRNIYFI-GPRSGGLEVNYARKEIIVITPQSPLGSNLIGKKKGQR--WKTQVGGNTIN 152

Query: 119 LEVLEL 124
             ++ +
Sbjct: 153 YHIVSV 158


>UniRef50_A2TUB1 Putative uncharacterized protein n=1 Tax=Dokdonia donghaensis
           MED134 RepID=A2TUB1_9FLAO
          Length = 152

 Score = 39.3 bits (91), Expect = 0.033,   Method: Composition-based stats.
 Identities = 15/97 (15%), Positives = 35/97 (36%), Gaps = 11/97 (11%)

Query: 16  IDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTL 75
           + +  E          + L     R ++    ++    V + S V    ++       ++
Sbjct: 55  LQLERENAGKQLAA-IEKLEQIFLRIKL----DLSEGPVHLGSVV----VTSQACYFISI 105

Query: 76  -VYPAKMTDSNTQ-LSVMAPVGAALLGLRVGDSIHWE 110
            V   K+       + + +P+G  L+G R GD + + 
Sbjct: 106 PVGAIKVDGLTFYAIGIGSPIGQLLMGKREGDEVRFR 142


>UniRef50_A0M6P4 Transcription elongation factor n=1 Tax=Gramella forsetii KT0803
           RepID=A0M6P4_GRAFK
          Length = 151

 Score = 39.3 bits (91), Expect = 0.036,   Method: Composition-based stats.
 Identities = 18/96 (18%), Positives = 33/96 (34%), Gaps = 17/96 (17%)

Query: 32  DALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQ---L 88
           + L+  L R +    +  P D V + S V               +   ++  +N +   +
Sbjct: 69  ERLSQILKRIE----DHKPTDKVVLGSVVM-----TNAANYFISIPAGEIKAANQKCYAV 119

Query: 89  SVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
            V AP+   LLG   GD               +L++
Sbjct: 120 GVKAPISQQLLGKEEGDQFTING-----KDFRILDI 150


>UniRef50_A9G528 Putative uncharacterized protein n=1 Tax=Sorangium cellulosum 'So
           ce 56' RepID=A9G528_SORC5
          Length = 167

 Score = 39.3 bits (91), Expect = 0.041,   Method: Composition-based stats.
 Identities = 22/125 (17%), Positives = 36/125 (28%), Gaps = 13/125 (10%)

Query: 7   IINDLDAERIDI---LLEQPAYAG---LPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
            +   +            + +Y           +   L R    +  +       + S  
Sbjct: 39  AVTHEENRAEGDKDMRATEASYVARGHSERVLQIEQALARLGAVTVRDFGPG-AGIESSA 97

Query: 61  KFRNLSDGEVRVRTLVYPAKM------TDSNTQLSVMAPVGAALLGLRVGDSIHWELPGG 114
                S     +  L+  A              L+  +P+GA+LLGL  GD      P G
Sbjct: 98  LVELESGKRRALYFLLPAAGGERIQFQGVELQTLATTSPLGASLLGLSEGDEAEVATPQG 157

Query: 115 VATHL 119
             THL
Sbjct: 158 TRTHL 162


>UniRef50_B1ZZ43 Putative uncharacterized protein n=1 Tax=Opitutus terrae PB90-1
           RepID=B1ZZ43_OPITP
          Length = 159

 Score = 38.6 bits (89), Expect = 0.063,   Method: Composition-based stats.
 Identities = 16/123 (13%), Positives = 37/123 (30%), Gaps = 12/123 (9%)

Query: 9   NDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPH-DVVTMNSRVKFRNLSD 67
            +   +         A     +A  +   +   +  +  ++P    V + + V      D
Sbjct: 39  PENQYDTHSQEAAYLAEGQARLAAEIAESITLYESLNLPDLPAASPVALGALVAL---DD 95

Query: 68  GEVRVRTLVYPAKMTDSNTQ-------LSVMAPVGAALLGLRVGDSIHWELP-GGVATHL 119
              +    + P                L+  +P+G  L+G RV D +       G    +
Sbjct: 96  RGRQSWFFIGPRGGGLELQVEGRNVLVLTPQSPLGRELMGKRVDDLVRLPNRVNGAPQRI 155

Query: 120 EVL 122
            ++
Sbjct: 156 TLV 158


>UniRef50_UPI0000E0F7E8 hypothetical protein GHTCC_05724 n=1 Tax=Glaciecola sp. HTCC2999
           RepID=UPI0000E0F7E8
          Length = 84

 Score = 38.6 bits (89), Expect = 0.068,   Method: Composition-based stats.
 Identities = 15/81 (18%), Positives = 30/81 (37%), Gaps = 10/81 (12%)

Query: 50  PHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNT-------QLSVMAPVGAALLGLR 102
             D++T+ + V+  +    E  +   + P                +S  +P+G  LLG  
Sbjct: 5   DIDIITIGALVEIIDQ--NETSLWVFLAPVSGGIKFEFKQRKIMVISTHSPLGKQLLGKE 62

Query: 103 VGDSIHWELPGGVATHLEVLE 123
            GD +   L    +T   + +
Sbjct: 63  TGDELSIGLGA-RSTQYRITD 82


>UniRef50_D1QR39 Putative uncharacterized protein n=1 Tax=Prevotella oris F0302
           RepID=D1QR39_9BACT
          Length = 1194

 Score = 38.2 bits (88), Expect = 0.074,   Method: Composition-based stats.
 Identities = 9/54 (16%), Positives = 23/54 (42%), Gaps = 1/54 (1%)

Query: 72  VRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP-GGVATHLEVLEL 124
              L+  A       +++  +P+G A++G +  D +   L        ++V+ +
Sbjct: 747 QYVLIEYANGDRKVYRITSDSPLGIAVIGKKANDIVEVNLDYSRRKRKVKVIGI 800


Searching..................................................done


Results from round 3


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

UniRef50_Q2LTP9 Transcription elongation factor n=2 Tax=Deltapro...   155   5e-37
UniRef50_C5S652 GreA/GreB family elongation factor n=2 Tax=Prote...   151   8e-36
UniRef50_A6VVR5 GreA/GreB family elongation factor n=15 Tax=Prot...   147   8e-35
UniRef50_B5EI69 GreA/GreB family elongation factor n=6 Tax=Desul...   142   3e-33
UniRef50_P64276 Transcription elongation factor greA n=48 Tax=de...   142   4e-33
UniRef50_Q1LSK1 Transcription elongation factor greA n=16 Tax=Pr...   142   4e-33
UniRef50_B3E3H5 Transcription elongation factor greA n=19 Tax=Pr...   141   5e-33
UniRef50_A8HR94 Transcription elongation factor greA n=5 Tax=Pro...   140   1e-32
UniRef50_Q3BX42 Regulator of nucleoside diphosphate kinase n=9 T...   140   1e-32
UniRef50_P0AFW6 Regulator of nucleoside diphosphate kinase n=155...   140   1e-32
UniRef50_B9KH08 Transcription elongation factor n=9 Tax=Ricketts...   138   4e-32
UniRef50_C0QKN0 Transcription elongation factor n=1 Tax=Desulfob...   138   4e-32
UniRef50_Q0A765 Transcription elongation factor greA n=23 Tax=Pr...   138   4e-32
UniRef50_Q4HT85 Transcription elongation factor n=1 Tax=Campylob...   138   5e-32
UniRef50_B2S6W5 Transcription elongation factor greA n=39 Tax=Ba...   138   6e-32
UniRef50_Q6MQZ8 Regulator of nucleoside diphosphate kinase n=1 T...   137   7e-32
UniRef50_A3ESJ0 Transcription elongation factor n=4 Tax=Bacteria...   137   1e-31
UniRef50_A0LL17 GreA/GreB family elongation factor n=3 Tax=Bacte...   137   1e-31
UniRef50_B8GS58 GreA/GreB family elongation factor n=22 Tax=Prot...   137   1e-31
UniRef50_A8F083 Transcription elongation factor greA n=13 Tax=Ri...   136   2e-31
UniRef50_D0LKY5 Transcription elongation factor n=1 Tax=Haliangi...   135   3e-31
UniRef50_A6LPL4 Transcription elongation factor greA n=30 Tax=Cl...   135   4e-31
UniRef50_A0AIU5 Transcription elongation factor greA n=99 Tax=Ba...   135   5e-31
UniRef50_Q725M4 Transcription elongation factor greA n=4 Tax=Des...   134   6e-31
UniRef50_B4UCU9 Transcription elongation factor greA n=588 Tax=B...   134   7e-31
UniRef50_C7GYY1 Transcription elongation factor n=1 Tax=Eubacter...   134   9e-31
UniRef50_Q04EK0 Transcription elongation factor greA n=4 Tax=Bac...   134   1e-30
UniRef50_Q97EB6 Transcription elongation factor greA n=6 Tax=Clo...   133   2e-30
UniRef50_Q7UVA0 Transcription elongation factor greA n=3 Tax=Pla...   132   3e-30
UniRef50_D1B0C0 Transcription elongation factor n=4 Tax=Campylob...   131   6e-30
UniRef50_Q057J4 Transcription elongation factor greA n=20 Tax=Pr...   131   7e-30
UniRef50_Q817Z6 Transcription elongation factor greA n=141 Tax=c...   130   1e-29
UniRef50_Q7VM42 Transcription elongation factor greB n=27 Tax=Pr...   130   1e-29
UniRef50_A8SDG2 Transcription elongation factor n=2 Tax=Clostrid...   130   1e-29
UniRef50_A5CVW9 Transcription elongation factor greA n=4 Tax=Gam...   130   1e-29
UniRef50_Q1H3Z9 GreA/GreB family elongation factor n=1 Tax=Methy...   130   2e-29
UniRef50_D2R891 Transcription elongation factor GreA n=1 Tax=Pir...   130   2e-29
UniRef50_C6RP41 GreA/GreB family elongation factor n=4 Tax=Acine...   130   2e-29
UniRef50_Q2LR03 Transcription elongation factor greA n=1 Tax=Syn...   130   2e-29
UniRef50_A5V3E1 Transcription elongation factor greA n=13 Tax=Pr...   129   2e-29
UniRef50_Q7MD62 Transcription elongation factor n=10 Tax=Proteob...   129   3e-29
UniRef50_B9NGJ6 Predicted protein n=12 Tax=cellular organisms Re...   128   5e-29
UniRef50_C4XLU8 Transcription elongation factor greA n=11 Tax=De...   128   6e-29
UniRef50_Q11P04 Transcription elongation factor n=1 Tax=Cytophag...   128   7e-29
UniRef50_C9RKD0 Transcription elongation factor n=1 Tax=Fibrobac...   127   7e-29
UniRef50_Q1H0G6 GreA/GreB family elongation factor n=3 Tax=Prote...   127   8e-29
UniRef50_A9WK05 Transcription elongation factor greA n=6 Tax=Chl...   127   1e-28
UniRef50_B1MX52 Transcription elongation factor greA n=11 Tax=Fi...   127   1e-28
UniRef50_C9RNS9 GreA/GreB family elongation factor n=1 Tax=Fibro...   127   1e-28
UniRef50_B0SEQ9 Transcription elongation factor n=2 Tax=Leptospi...   127   1e-28
UniRef50_B9MBQ3 GreA/GreB family elongation factor n=6 Tax=Betap...   127   2e-28
UniRef50_UPI00016C498C transcription elongation factor greA n=1 ...   126   2e-28
UniRef50_A4XNX9 GreA/GreB family elongation factor n=16 Tax=Bact...   126   2e-28
UniRef50_D1B632 Transcription elongation factor n=4 Tax=Synergis...   126   3e-28
UniRef50_Q03RN4 Transcription elongation factor n=1 Tax=Lactobac...   126   3e-28
UniRef50_Q88DU7 Transcription elongation factor greA n=83 Tax=Pr...   126   3e-28
UniRef50_A5FRA2 Transcription elongation factor n=3 Tax=Dehaloco...   126   3e-28
UniRef50_Q9HZY5 Transcription elongation factor greB n=13 Tax=Ga...   125   4e-28
UniRef50_UPI0001C3129D transcription elongation factor GreA n=1 ...   125   4e-28
UniRef50_Q8ZJH2 Transcription elongation factor greB n=165 Tax=P...   125   4e-28
UniRef50_A0LK20 Transcription elongation factor greA n=1 Tax=Syn...   125   5e-28
UniRef50_Q096W9 Transcription elongation factor GreB n=1 Tax=Sti...   125   5e-28
UniRef50_Q67JL1 Transcription elongation factor n=2 Tax=Clostrid...   125   5e-28
UniRef50_Q3K4S3 Regulator of nucleoside diphosphate kinase n=2 T...   125   6e-28
UniRef50_C9KJ19 Transcription elongation factor n=1 Tax=Mitsuoke...   124   7e-28
UniRef50_B5JTX6 Transcription elongation factor n=1 Tax=gamma pr...   124   7e-28
UniRef50_Q2GD99 Transcription elongation factor greA n=2 Tax=Neo...   124   8e-28
UniRef50_B8G0E1 GreA/GreB family elongation factor n=2 Tax=Desul...   124   8e-28
UniRef50_C4Z9L9 Transcription elongation factor n=3 Tax=Firmicut...   124   9e-28
UniRef50_Q2Y7V5 GreA/GreB family elongation factor n=33 Tax=cell...   124   1e-27
UniRef50_D0J9T5 Transcription elongation factor n=55 Tax=Bacteri...   124   1e-27
UniRef50_A9GAI2 Regulator of nucleoside diphosphate kinase n=1 T...   124   1e-27
UniRef50_Q4KB20 Acetyltransferase, GNAT family family n=9 Tax=Ba...   124   1e-27
UniRef50_Q13WN5 GreA/GreB family elongation factor n=50 Tax=Burk...   123   2e-27
UniRef50_A9MBQ4 GreA/GreB family elongation factor n=36 Tax=Bruc...   122   2e-27
UniRef50_D0J5N8 Kelongation factor GreB n=4 Tax=Proteobacteria R...   122   2e-27
UniRef50_Q2Z001 Transcription elongation factor n=1 Tax=uncultur...   122   3e-27
UniRef50_A6X582 GreA/GreB family elongation factor n=3 Tax=Rhizo...   122   3e-27
UniRef50_C9P6Y2 Regulator of nucleoside diphosphate kinase n=1 T...   122   3e-27
UniRef50_Q1AU03 Transcription elongation factor n=1 Tax=Rubrobac...   122   4e-27
UniRef50_Q3ATA7 Transcription elongation factor greA n=13 Tax=Ba...   121   5e-27
UniRef50_A7HDS3 Transcription elongation factor GreB n=3 Tax=Myx...   121   5e-27
UniRef50_Q0BR49 Transcription elongation factor greB n=4 Tax=cel...   121   6e-27
UniRef50_C6X5Q8 Transcription elongation factor n=1 Tax=Flavobac...   121   6e-27
UniRef50_D2T9B8 Transcription elongation factor greB n=3 Tax=Erw...   121   7e-27
UniRef50_Q98Q16 Transcription elongation factor greA n=3 Tax=Myc...   121   9e-27
UniRef50_Q04HS9 Transcription elongation factor greA n=90 Tax=Ba...   121   9e-27
UniRef50_Q30T56 Transcription elongation factor n=3 Tax=Campylob...   121   1e-26
UniRef50_C3X2V3 GreA/GreB family elongation factor n=2 Tax=Oxalo...   121   1e-26
UniRef50_A6W1U9 Transcription elongation factor GreB n=17 Tax=Ga...   120   1e-26
UniRef50_A5VGM9 GreA/GreB family elongation factor n=1 Tax=Sphin...   119   2e-26
UniRef50_Q3SMM4 GreA/GreB family elongation factor n=1 Tax=Thiob...   119   2e-26
UniRef50_Q1QUF3 GreA/GreB family elongation factor n=1 Tax=Chrom...   119   2e-26
UniRef50_Q88KH5 Transcription elongation factor greB n=84 Tax=Ga...   119   3e-26
UniRef50_A2RGA4 Transcription elongation factor greA n=111 Tax=F...   118   4e-26
UniRef50_D1SYS0 GreA/GreB family elongation factor n=1 Tax=Acido...   118   6e-26
UniRef50_A6GQE5 Nucleoside diphosphate kinase regulator n=1 Tax=...   118   6e-26
UniRef50_O51157 Transcription elongation factor greA n=23 Tax=Bo...   118   6e-26
UniRef50_C1XQ58 Transcription elongation factor n=2 Tax=Meiother...   118   6e-26
UniRef50_A5F052 Regulator of nucleoside diphosphate kinase n=31 ...   118   6e-26
UniRef50_D1PEW3 Transcription elongation factor n=1 Tax=Prevotel...   117   8e-26
UniRef50_Q4A759 Transcription elongation factor greA n=4 Tax=Myc...   117   8e-26
UniRef50_C0N448 Putative uncharacterized protein n=1 Tax=Methylo...   117   1e-25
UniRef50_Q01RT9 GreA/GreB family elongation factor n=2 Tax=Acido...   117   1e-25
UniRef50_UPI0001C37CEA transcription elongation factor GreA n=1 ...   117   2e-25
UniRef50_Q2S2N3 Transcription elongation factor n=1 Tax=Saliniba...   116   2e-25
UniRef50_Q3Z8E7 Transcription elongation factor greA n=2 Tax=Deh...   116   2e-25
UniRef50_B1H062 Transcription elongation factor n=1 Tax=uncultur...   116   2e-25
UniRef50_Q74EX3 Nucleoside diphosphate kinase regulator protein,...   116   2e-25
UniRef50_B3PF63 Regulator of nucleoside diphosphate kinase n=1 T...   116   2e-25
UniRef50_A6NZ08 Transcription elongation factor n=1 Tax=Bacteroi...   116   3e-25
UniRef50_C5BN87 Transcription elongation factor GreB n=5 Tax=Pro...   115   3e-25
UniRef50_Q1H282 GreA/GreB family elongation factor n=2 Tax=Prote...   115   3e-25
UniRef50_A5V983 GreA/GreB family elongation factor n=1 Tax=Sphin...   115   3e-25
UniRef50_A6C278 Nucleoside diphosphate kinase regulator protein,...   115   4e-25
UniRef50_C1F9R4 Transcription elongation factor GreA n=1 Tax=Aci...   115   4e-25
UniRef50_A1TUC9 GreA/GreB family elongation factor n=4 Tax=Burkh...   115   4e-25
UniRef50_B2SQJ5 Regulator of nucleoside diphosphate kinase n=8 T...   115   5e-25
UniRef50_B2V1C0 Transcription elongation factor n=28 Tax=Clostri...   115   5e-25
UniRef50_A2SJD8 Transcription elongation factor n=50 Tax=Proteob...   115   5e-25
UniRef50_C8W826 Transcription elongation factor n=7 Tax=Coriobac...   115   6e-25
UniRef50_A6H247 Transcription elongation factor greA n=33 Tax=Ba...   114   6e-25
UniRef50_Q3SU57 GreA/GreB family elongation factor n=9 Tax=Brady...   114   6e-25
UniRef50_B8IFL5 GreA/GreB family elongation factor n=8 Tax=Methy...   114   7e-25
UniRef50_A5VME9 Transcription elongation factor GreA n=49 Tax=La...   114   7e-25
UniRef50_C0QWD9 Transcription elongation factor n=2 Tax=Brachysp...   114   7e-25
UniRef50_A6NPJ1 Putative uncharacterized protein n=1 Tax=Bactero...   114   8e-25
UniRef50_B0VIH5 Putative transcription elongation factor n=1 Tax...   114   1e-24
UniRef50_Q04UP0 Transcription elongation factor n=6 Tax=Leptospi...   113   1e-24
UniRef50_A5IYH4 Transcription elongation factor greA n=3 Tax=Myc...   113   2e-24
UniRef50_B3DVF3 Transcription elongation factor GreA fused to un...   113   2e-24
UniRef50_D2RL35 GreA/GreB family elongation factor n=3 Tax=Veill...   113   2e-24
UniRef50_B0N6V6 Transcription elongation factor n=4 Tax=Bacteria...   113   2e-24
UniRef50_Q8P7P8 Transcription elongation factor greB n=53 Tax=Pr...   113   2e-24
UniRef50_Q9JVD0 Transcription elongation factor greB n=64 Tax=Ba...   112   2e-24
UniRef50_B3PM73 Transcription elongation factor greA n=1 Tax=Myc...   112   3e-24
UniRef50_A4E9C2 Transcription elongation factor n=1 Tax=Collinse...   112   4e-24
UniRef50_UPI00017427C8 transcription elongation factor GreA n=1 ...   112   4e-24
UniRef50_B5Y9H5 Transcription elongation factor n=1 Tax=Coprothe...   112   4e-24
UniRef50_Q2N9J5 Transcription elongation factor n=2 Tax=Erythrob...   112   4e-24
UniRef50_B7CAB2 Transcription elongation factor n=5 Tax=Erysipel...   112   4e-24
UniRef50_B1AIU2 Transcription elongation factor greA n=28 Tax=Ur...   112   5e-24
UniRef50_Q1PYP5 Transcription elongation factor n=1 Tax=Candidat...   112   5e-24
UniRef50_Q5SKM1 Transcription elongation factor n=5 Tax=Thermus ...   112   5e-24
UniRef50_C4ZAT8 Transcription elongation factor GreA n=21 Tax=Fi...   112   5e-24
UniRef50_B0P8A6 Transcription elongation factor n=1 Tax=Anaerotr...   112   5e-24
UniRef50_Q12SN9 Transcription elongation factor GreB n=17 Tax=Ba...   111   5e-24
UniRef50_B2KBD2 GreA/GreB family elongation factor n=1 Tax=Elusi...   111   6e-24
UniRef50_A8LN19 GreA/GreB family elongation factor n=8 Tax=Alpha...   111   6e-24
UniRef50_A9BFC0 Transcription elongation factor greA n=12 Tax=Th...   111   6e-24
UniRef50_C6VSR5 GreA/GreB family elongation factor n=2 Tax=Sphin...   111   6e-24
UniRef50_B5ZLJ0 Transcription elongation factor GreB n=5 Tax=Pro...   111   6e-24
UniRef50_UPI0001746370 transcript cleavage factor/unknown domain...   111   7e-24
UniRef50_C6WYK0 GreA/GreB family elongation factor n=2 Tax=Methy...   111   8e-24
UniRef50_A7VBG3 Putative uncharacterized protein n=1 Tax=Clostri...   110   1e-23
UniRef50_D0WJ76 Transcription elongation factor n=1 Tax=Slackia ...   110   1e-23
UniRef50_C7N7T1 Transcription elongation factor n=1 Tax=Slackia ...   110   1e-23
UniRef50_B4RF21 Transcription elongation factor n=2 Tax=cellular...   110   1e-23
UniRef50_B1ZZX3 GreA/GreB family elongation factor n=3 Tax=Verru...   110   2e-23
UniRef50_B2S1W7 Transcription elongation factor greA n=6 Tax=Tre...   110   2e-23
UniRef50_C7T958 Transcription elongation factor n=4 Tax=Lactobac...   109   2e-23
UniRef50_P47524 Transcription elongation factor greA n=4 Tax=Myc...   109   2e-23
UniRef50_Q0B0N4 Transcription elongation factor greA n=6 Tax=Clo...   109   3e-23
UniRef50_B9L0L0 Transcription elongation factor greA n=1 Tax=The...   109   3e-23
UniRef50_B0T7C4 GreA/GreB family elongation factor n=1 Tax=Caulo...   109   3e-23
UniRef50_Q2SSM5 Transcription elongation factor greA n=6 Tax=Mol...   109   3e-23
UniRef50_B9XT30 GreA/GreB family elongation factor n=1 Tax=bacte...   109   4e-23
UniRef50_C7PP41 Transcription elongation factor n=1 Tax=Chitinop...   108   6e-23
UniRef50_B4D3Z7 GreA/GreB family elongation factor n=1 Tax=Chtho...   108   6e-23
UniRef50_D0KZQ0 Transcription elongation factor GreB n=1 Tax=Hal...   108   6e-23
UniRef50_A0LES5 GreA/GreB family elongation factor n=1 Tax=Syntr...   108   7e-23
UniRef50_B7L307 GreA/GreB family elongation factor n=1 Tax=Methy...   107   8e-23
UniRef50_D1C6T4 Transcription elongation factor n=1 Tax=Sphaerob...   107   9e-23
UniRef50_A7IJH2 GreA/GreB family elongation factor n=4 Tax=Rhizo...   107   9e-23
UniRef50_A9EFF1 GreA/GreB family elongation factor n=1 Tax=Ocean...   107   1e-22
UniRef50_A9NGN4 Transcription elongation factor greA n=7 Tax=Ach...   107   1e-22
UniRef50_D2PP26 Transcription elongation factor GreA n=3 Tax=Act...   107   1e-22
UniRef50_Q5P744 Transcription elongation factor n=3 Tax=Proteoba...   107   1e-22
UniRef50_D1CDC6 Transcription elongation factor n=1 Tax=Thermoba...   107   2e-22
UniRef50_C1ZBG3 Transcription elongation factor n=1 Tax=Planctom...   106   2e-22
UniRef50_Q2G8D8 GreA/GreB family elongation factor n=4 Tax=cellu...   106   2e-22
UniRef50_A4CMB9 Nucleoside diphosphate kinase regulator n=1 Tax=...   105   3e-22
UniRef50_C6XWY5 Transcription elongation factor GreA/GreB domain...   105   4e-22
UniRef50_B1XUH7 Transcription elongation factor GreB n=2 Tax=Pol...   105   5e-22
UniRef50_Q88ZS9 Transcription elongation factor greA 1 n=7 Tax=L...   105   6e-22
UniRef50_B1ZU20 GreA/GreB family elongation factor n=1 Tax=Opitu...   104   7e-22
UniRef50_A7HFE1 GreA/GreB family elongation factor n=1 Tax=Anaer...   104   9e-22
UniRef50_B9E669 Transcription elongation factor n=5 Tax=Clostrid...   104   1e-21
UniRef50_A0LZA7 Transcription elongation factor n=1 Tax=Gramella...   104   1e-21
UniRef50_A1U1V6 GreA/GreB family elongation factor n=2 Tax=Marin...   103   1e-21
UniRef50_Q98F06 Nucleoside diphosphate kinase regulator n=2 Tax=...   103   1e-21
UniRef50_C6WVB7 GreA/GreB family elongation factor n=2 Tax=Methy...   103   1e-21
UniRef50_UPI0000E87FB5 transcription elongation factor GreB n=1 ...   103   2e-21
UniRef50_Q930S2 Putative uncharacterized protein n=1 Tax=Sinorhi...   103   2e-21
UniRef50_A9KJU6 GreA/GreB family elongation factor n=8 Tax=Clost...   102   3e-21
UniRef50_A4F866 Transcription elongation factor greA n=44 Tax=Ac...   102   3e-21
UniRef50_A4BB58 Nucleoside diphosphate kinase regulator n=1 Tax=...   102   4e-21
UniRef50_B9KZF4 Transcription elongation factor greA n=2 Tax=The...   102   4e-21
UniRef50_Q9Z7G4 Transcription elongation factor greA n=13 Tax=Ch...   101   5e-21
UniRef50_Q2GA51 GreA/GreB family elongation factor n=1 Tax=Novos...   101   6e-21
UniRef50_A6EMP4 Transcription elongation factor n=4 Tax=Bacteroi...   101   7e-21
UniRef50_A7HAZ2 GreA/GreB family elongation factor n=5 Tax=Myxoc...   101   7e-21
UniRef50_C0A6F4 GreA/GreB family elongation factor n=1 Tax=Opitu...   101   7e-21
UniRef50_B2UNZ9 GreA/GreB family elongation factor n=1 Tax=Akker...   101   9e-21
UniRef50_Q15Z69 GreA/GreB family elongation factor n=1 Tax=Pseud...   101   9e-21
UniRef50_Q1J0L4 Transcription elongation factor n=3 Tax=Deinococ...   100   1e-20
UniRef50_D1R523 Putative uncharacterized protein n=1 Tax=Parachl...   100   1e-20
UniRef50_C7M0F0 GreA/GreB family elongation factor n=1 Tax=Acidi...   100   1e-20
UniRef50_Q0BZP7 Regulatory protein n=1 Tax=Hyphomonas neptunium ...   100   1e-20
UniRef50_B0T793 GreA/GreB family elongation factor n=1 Tax=Caulo...   100   2e-20
UniRef50_A7HXN2 GreA/GreB family elongation factor n=1 Tax=Parvi...   100   2e-20
UniRef50_A6EIL5 Nucleoside diphosphate kinase regulator protein,...   100   2e-20
UniRef50_B9XEY1 GreA/GreB family elongation factor n=1 Tax=bacte...    99   3e-20
UniRef50_C6X3W9 Transcription elongation factor GreB n=1 Tax=Fla...    99   5e-20
UniRef50_A5FHU8 GreA/GreB family elongation factor n=1 Tax=Flavo...    99   6e-20
UniRef50_C1A2Y4 Transcription elongation factor greA n=41 Tax=Co...    98   6e-20
UniRef50_Q5QX12 Transcription elongation factor family protein n...    98   7e-20
UniRef50_Q6MF39 Putative uncharacterized protein n=1 Tax=Candida...    98   8e-20
UniRef50_B4W8F1 Putative uncharacterized protein n=1 Tax=Brevund...    98   9e-20
UniRef50_C0JZV3 Transcription elongation factor GreA n=1 Tax=unc...    98   9e-20
UniRef50_C8S319 GreA/GreB family elongation factor n=1 Tax=Rhodo...    97   1e-19
UniRef50_UPI0001C31C12 transcription elongation factor GreA n=1 ...    97   2e-19
UniRef50_A1TE43 Transcription elongation factor greA n=11 Tax=Co...    97   2e-19
UniRef50_A3HZU2 Transcription elongation factor GreB n=2 Tax=Bac...    96   4e-19
UniRef50_B4RBL2 Transcription elongation factor n=1 Tax=Phenylob...    96   5e-19
UniRef50_A6STV7 Transcription elongation factor GreB n=2 Tax=Oxa...    95   6e-19
UniRef50_A3PS97 GreA/GreB family elongation factor n=4 Tax=Rhodo...    95   7e-19
UniRef50_Q4K5S3 Transcription elongation factor GreB n=3 Tax=Pse...    94   2e-18
UniRef50_Q1CX76 Transcription elongation factor, GreA/GreB famil...    93   2e-18
UniRef50_D2KXD7 Transcription elongation factor n=1 Tax=Lactobac...    92   3e-18
UniRef50_C5BTE2 Transcription elongation factor GreA n=1 Tax=Ter...    92   4e-18
UniRef50_B8DTJ6 Transcription elongation factor GreA n=15 Tax=Bi...    92   4e-18
UniRef50_Q848L1 GreA n=1 Tax=uncultured bacterium RepID=Q848L1_9...    92   4e-18
UniRef50_B2GLP4 Transcription elongation factor n=3 Tax=Actinomy...    92   7e-18
UniRef50_A0JU41 GreA/GreB family elongation factor n=21 Tax=Acti...    91   8e-18
UniRef50_D2NP88 Transcription elongation factor n=2 Tax=Rothia m...    91   1e-17
UniRef50_B4UMG4 GreA/GreB family elongation factor n=4 Tax=Anaer...    91   1e-17
UniRef50_A6DK30 Putative uncharacterized protein n=1 Tax=Lentisp...    91   1e-17
UniRef50_D2QK34 GreA/GreB family elongation factor n=1 Tax=Spiro...    91   1e-17
UniRef50_C4RPW8 Transcription elongation factor n=1 Tax=Micromon...    91   2e-17
UniRef50_B4D5K0 GreA/GreB family elongation factor n=1 Tax=Chtho...    90   2e-17
UniRef50_A0M1N1 GreA-like transcription elongation factor n=3 Ta...    90   2e-17
UniRef50_C1ABM5 Transcription elongation factor GreA n=1 Tax=Gem...    90   3e-17
UniRef50_A6SZ83 Transcription elongation factor, greA family n=2...    89   3e-17
UniRef50_C7CFG6 Putative regulator n=1 Tax=Methylobacterium exto...    89   5e-17
UniRef50_A6X2G5 GreA/GreB family elongation factor n=2 Tax=Ochro...    89   6e-17
UniRef50_B1ZQE9 GreA/GreB family elongation factor n=1 Tax=Opitu...    88   9e-17
UniRef50_Q98F07 Nucleoside diphosphate kinase regulator; Rnk n=2...    88   9e-17
UniRef50_Q97HP4 Transcription elongation factor n=1 Tax=Clostrid...    88   1e-16
UniRef50_Q83FN6 Transcription elongation factor n=3 Tax=Micrococ...    87   1e-16
UniRef50_B9KMW2 Transcription elongation factor n=3 Tax=Rhodobac...    87   1e-16
UniRef50_B1I1G7 GreA/GreB family elongation factor n=1 Tax=Candi...    87   1e-16
UniRef50_Q0PQI1 Transcription elongation factor (Fragment) n=1 T...    87   1e-16
UniRef50_B8IHN9 GreA/GreB family elongation factor n=1 Tax=Methy...    87   2e-16
UniRef50_C6B1R3 GreA/GreB family elongation factor n=16 Tax=cell...    86   3e-16
UniRef50_A1A150 Transcription elongation factor GreA n=6 Tax=Bif...    86   3e-16
UniRef50_B9J7D6 Transcription elongation factor protein n=52 Tax...    86   3e-16
UniRef50_A5FHJ3 GreA/GreB family elongation factor n=3 Tax=Flavo...    86   4e-16
UniRef50_A5D4X0 Putative uncharacterized protein n=1 Tax=Pelotom...    86   4e-16
UniRef50_B4RDE4 Transcription elongation factor GreA/GreB, famil...    86   5e-16
UniRef50_Q5SJG6 Anti-cleavage anti-GreA transcription factor Gfh...    85   6e-16
UniRef50_C4L6P4 GreA/GreB family elongation factor n=1 Tax=Exigu...    85   6e-16
UniRef50_Q88Q22 Transcription elongation factor, putative n=11 T...    84   2e-15
UniRef50_Q13CU9 Putative uncharacterized protein n=1 Tax=Rhodops...    83   3e-15
UniRef50_B1ZD84 GreA/GreB family elongation factor n=4 Tax=Methy...    83   3e-15
UniRef50_Q11G80 GreA/GreB family elongation factor n=1 Tax=Chela...    82   6e-15
UniRef50_D1N5G0 GreA/GreB family elongation factor n=1 Tax=Victi...    81   8e-15
UniRef50_C1CW74 Putative transcription elongation factor n=1 Tax...    81   1e-14
UniRef50_B6BTF1 GreA/GreB family elongation factor n=2 Tax=Betap...    80   2e-14
UniRef50_C6UNA6 Putative transcription elongation factor GreA n=...    80   2e-14
UniRef50_Q1IZY0 GreA/GreB family elongation factor n=4 Tax=Deino...    80   3e-14
UniRef50_A1TEF4 GreA/GreB family elongation factor n=5 Tax=Actin...    79   4e-14
UniRef50_B0T2S8 GreA/GreB family elongation factor n=15 Tax=Alph...    79   5e-14
UniRef50_Q1IXC6 GreA/GreB family elongation factor n=1 Tax=Deino...    79   6e-14
UniRef50_C6XVH8 Transcription elongation factor n=1 Tax=Pedobact...    78   1e-13
UniRef50_A7HXN3 GreA/GreB family elongation factor n=1 Tax=Parvi...    77   2e-13
UniRef50_A4T6M8 GreA/GreB family elongation factor n=3 Tax=Mycob...    76   3e-13
UniRef50_UPI0001B58AC8 GreA/GreB family elongation factor n=1 Ta...    76   3e-13
UniRef50_Q9RRW0 Transcription elongation factor n=1 Tax=Deinococ...    76   4e-13
UniRef50_UPI0001746B72 nucleoside diphosphate kinase regulator p...    75   6e-13
UniRef50_A3DJU3 GreA/GreB family elongation factor n=3 Tax=Clost...    75   7e-13
UniRef50_Q1YFK5 Possible transcription elongation factor, GreA/G...    74   1e-12
UniRef50_A4CMC2 Putative uncharacterized protein n=1 Tax=Robigin...    74   1e-12
UniRef50_B1ZXU0 GreA/GreB family elongation factor n=1 Tax=Opitu...    73   2e-12
UniRef50_Q2SLP2 Transcription elongation factor n=1 Tax=Hahella ...    73   3e-12
UniRef50_C0QME5 GreA2 n=1 Tax=Desulfobacterium autotrophicum HRM...    72   5e-12
UniRef50_D0J1H3 Putative uncharacterized protein n=1 Tax=Comamon...    72   5e-12
UniRef50_A6NYB0 Putative uncharacterized protein n=1 Tax=Bactero...    72   5e-12
UniRef50_C0ZE34 Putative uncharacterized protein n=1 Tax=Breviba...    72   7e-12
UniRef50_UPI0001AF7313 transcription elongation factor GreA n=1 ...    70   2e-11
UniRef50_UPI0001AF7314 transcription elongation factor GreA n=1 ...    70   3e-11
UniRef50_B4RBL3 Transcription elongation factor GreA/GreB family...    69   5e-11
UniRef50_Q3A1F8 GreA/GreB family elongation factor n=4 Tax=Desul...    68   9e-11
UniRef50_Q4K8S4 Putative uncharacterized protein n=1 Tax=Pseudom...    68   1e-10
UniRef50_A5VFW5 GreA/GreB family elongation factor n=3 Tax=Sphin...    67   1e-10
UniRef50_A4FCQ0 Transcription elongation factor G n=1 Tax=Saccha...    67   1e-10
UniRef50_Q930S1 Putative uncharacterized protein n=1 Tax=Sinorhi...    67   2e-10
UniRef50_D0M044 Transcription elongation factor n=15 Tax=Vibrion...    66   4e-10
UniRef50_Q0F3H5 GreA/GreB family elongation factor n=1 Tax=Marip...    66   5e-10
UniRef50_A1AQR3 GreA/GreB family elongation factor n=4 Tax=Desul...    64   1e-09
UniRef50_A5W772 GreA/GreB family elongation factor n=5 Tax=Prote...    64   1e-09
UniRef50_Q39Z43 GreA/GreB family elongation factor n=18 Tax=Prot...    63   2e-09
UniRef50_A4VNK9 Transcription elongation factor n=1 Tax=Pseudomo...    62   4e-09
UniRef50_Q5QX13 Transcription elongation factor greA/greB family...    62   4e-09
UniRef50_B1ZU18 GreA/GreB family elongation factor n=1 Tax=Opitu...    62   5e-09
UniRef50_D0M4S6 Putative uncharacterized protein n=7 Tax=Vibrio ...    62   8e-09
UniRef50_C9Z2D0 Putative uncharacterized protein n=1 Tax=Strepto...    62   8e-09
UniRef50_Q1MZY3 Putative uncharacterized protein n=1 Tax=Bermane...    61   9e-09
UniRef50_Q67NL4 Putative transcription elongation factor n=1 Tax...    61   1e-08
UniRef50_A1RN18 GreA/GreB family elongation factor n=11 Tax=Shew...    61   1e-08
UniRef50_A8LPH9 Putative uncharacterized protein n=1 Tax=Dinoros...    61   1e-08
UniRef50_B6EH16 Putative uncharacterized protein n=1 Tax=Aliivib...    61   1e-08
UniRef50_B9ZS32 GreA/GreB family elongation factor n=1 Tax=Thioa...    60   2e-08
UniRef50_A0QE66 Transcription elongation factor GreA n=2 Tax=Myc...    60   2e-08
UniRef50_A9EFE9 Putative uncharacterized protein n=1 Tax=Oceanib...    60   3e-08
UniRef50_Q0BS89 Transcription elongation factor greB n=1 Tax=Gra...    60   3e-08
UniRef50_A8H435 GreA/GreB family elongation factor n=2 Tax=Shewa...    59   3e-08
UniRef50_Q1DFU3 GreA/GreB domain protein n=3 Tax=Myxococcales Re...    59   4e-08
UniRef50_C4DVL0 Transcription elongation factor n=1 Tax=Stackebr...    59   6e-08
UniRef50_C7MX98 Transcription elongation factor n=1 Tax=Saccharo...    58   8e-08
UniRef50_C4DV10 Putative uncharacterized protein n=1 Tax=Stackeb...    57   1e-07
UniRef50_A6VXC9 GreA/GreB family elongation factor n=2 Tax=Marin...    57   2e-07
UniRef50_B5FBA9 Transcription elongation factor n=2 Tax=Vibrio f...    57   2e-07
UniRef50_Q2CH34 Putative uncharacterized protein n=2 Tax=Oceanic...    56   3e-07
UniRef50_C1YJ21 Transcription elongation factor n=3 Tax=Actinomy...    56   4e-07
UniRef50_C0A4E5 Putative uncharacterized protein n=1 Tax=Opituta...    56   5e-07
UniRef50_A6D862 Putative uncharacterized protein n=1 Tax=Vibrio ...    55   7e-07
UniRef50_D1CSU3 Transcription elongation factor (Fragment) n=1 T...    55   8e-07
UniRef50_A2VH02 Transcription elongation factor greA (Transcript...    55   9e-07
UniRef50_Q0VMM9 Putative uncharacterized protein n=2 Tax=Alcaniv...    54   1e-06
UniRef50_B2IF32 DNA helicase, putative n=2 Tax=Rhizobiales RepID...    53   3e-06
UniRef50_UPI0001B57B91 nucleoside diphosphate kinase regulator n...    53   3e-06
UniRef50_A3M8R9 Putative uncharacterized protein n=2 Tax=Acineto...    52   5e-06
UniRef50_P65095 Uncharacterized protein Rv3788/MT3896 n=17 Tax=M...    52   7e-06
UniRef50_A9EFU2 Nucleoside diphosphate kinase regulator n=1 Tax=...    51   1e-05
UniRef50_UPI0001AEE145 nucleoside diphosphate kinase regulator n...    51   2e-05

Sequences not found previously or not previously below threshold:

UniRef50_A8FVY8 Putative uncharacterized protein n=1 Tax=Shewane...    54   1e-06
UniRef50_A1SXZ5 GreA/GreB family elongation factor n=5 Tax=Gamma...    54   2e-06
UniRef50_Q1K1G0 GreA/GreB family elongation factor n=1 Tax=Desul...    54   2e-06
UniRef50_B8CMM7 Transcription elongation factor n=1 Tax=Shewanel...    53   3e-06
UniRef50_B4D7C3 GreA/GreB family elongation factor n=1 Tax=Chtho...    51   1e-05
UniRef50_A4CAX2 Putative uncharacterized protein n=1 Tax=Pseudoa...    51   2e-05
UniRef50_Q487U2 Putative uncharacterized protein n=1 Tax=Colwell...    49   3e-05
UniRef50_B9X9L2 Putative uncharacterized protein n=1 Tax=bacteri...    48   8e-05
UniRef50_Q6MHB9 Putative uncharacterized protein n=1 Tax=Bdellov...    47   2e-04
UniRef50_A6DU10 Putative uncharacterized protein n=1 Tax=Lentisp...    46   3e-04
UniRef50_B1ZZ43 Putative uncharacterized protein n=1 Tax=Opitutu...    46   4e-04
UniRef50_A0YBQ5 Putative uncharacterized protein n=1 Tax=marine ...    46   4e-04
UniRef50_B2A7T5 Putative uncharacterized protein n=1 Tax=Natrana...    44   0.001
UniRef50_A9G528 Putative uncharacterized protein n=1 Tax=Sorangi...    44   0.002
UniRef50_A5F491 Putative uncharacterized protein n=31 Tax=Vibrio...    44   0.002
UniRef50_C0BIS2 GreA/GreB family elongation factor n=1 Tax=Flavo...    43   0.004
UniRef50_A9EK60 Transcription elongation factor n=1 Tax=Shewanel...    42   0.005
UniRef50_UPI0000E0F7E8 hypothetical protein GHTCC_05724 n=1 Tax=...    42   0.006
UniRef50_D1SQ94 Putative uncharacterized protein n=1 Tax=Acidovo...    42   0.008
UniRef50_A2TUB1 Putative uncharacterized protein n=1 Tax=Dokdoni...    42   0.008
UniRef50_D1QR39 Putative uncharacterized protein n=1 Tax=Prevote...    40   0.021
UniRef50_UPI00017450EA transcription elongation factor n=1 Tax=V...    40   0.029
UniRef50_Q0HPS7 GreA/GreB family elongation factor n=4 Tax=Gamma...    39   0.042
UniRef50_C6X1H7 Putative uncharacterized protein n=2 Tax=Flavoba...    39   0.046
UniRef50_A0M6P4 Transcription elongation factor n=1 Tax=Gramella...    39   0.071

>UniRef50_Q2LTP9 Transcription elongation factor n=2 Tax=Deltaproteobacteria
           RepID=Q2LTP9_SYNAS
          Length = 134

 Score =  155 bits (392), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 61/136 (44%), Positives = 85/136 (62%), Gaps = 2/136 (1%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           M++  I + + D ER++ LLE         A +L AEL  A +   EEMP DVVTMNS V
Sbjct: 1   MNKRRIYVTEQDMERLEDLLETS--KKSEYARSLEAELVNAVVVPSEEMPPDVVTMNSCV 58

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
            F +L+ G     TLVYP +   ++ ++SV+APVG+AL+GL VG +I W +P G    L 
Sbjct: 59  CFEDLTTGNRETITLVYPGQANMASGRVSVLAPVGSALIGLSVGQTIEWPMPNGRKRRLR 118

Query: 121 VLELEYQPEAAGDYLL 136
           ++E+ YQPEAAGD+ L
Sbjct: 119 IVEVLYQPEAAGDFHL 134


>UniRef50_C5S652 GreA/GreB family elongation factor n=2 Tax=Proteobacteria
           RepID=C5S652_CHRVI
          Length = 171

 Score =  151 bits (381), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 65/133 (48%), Positives = 86/133 (64%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
           S+P II++ LDAER++ L+E       P  D L AEL RA++  P EMP +VV+MNS V+
Sbjct: 37  SQPKIILSSLDAERLENLIESLPRNAFPGMDELEAELARAEVVDPREMPPNVVSMNSTVR 96

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           FR +S  E    TLVYP  M  S  ++S++APVG+ALLGL  GD I W  PGG    + +
Sbjct: 97  FRVMSTNEAFTLTLVYPKDMDASGGKISILAPVGSALLGLSSGDEIEWPKPGGGVLRVRI 156

Query: 122 LELEYQPEAAGDY 134
            E+ YQPE AG+Y
Sbjct: 157 EEVTYQPERAGEY 169


>UniRef50_A6VVR5 GreA/GreB family elongation factor n=15 Tax=Proteobacteria
           RepID=A6VVR5_MARMS
          Length = 137

 Score =  147 bits (373), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 58/136 (42%), Positives = 88/136 (64%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           M RP I I+ LDA R++ +L+  +Y+  P  D L  E++RA++  P +MP ++VTMNS V
Sbjct: 2   MQRPQITISSLDAVRLEKILDSLSYSQFPNKDDLQEEINRAEIVEPRDMPDNIVTMNSTV 61

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
            F+ LS  +   +TLVYP     +   +SV+APVG+ALLGL+ GD I W  P G    + 
Sbjct: 62  TFKVLSSEKEFSKTLVYPKDANGAEDTVSVLAPVGSALLGLKEGDQIDWPKPNGDVLSVV 121

Query: 121 VLELEYQPEAAGDYLL 136
           +++++YQPE AG++ L
Sbjct: 122 IMKVDYQPERAGEFQL 137


>UniRef50_B5EI69 GreA/GreB family elongation factor n=6 Tax=Desulfuromonadales
           RepID=B5EI69_GEOBB
          Length = 143

 Score =  142 bits (359), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 52/137 (37%), Positives = 85/137 (62%), Gaps = 4/137 (2%)

Query: 3   RPTIIINDLDAERIDILLEQP---AYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSR 59
           +  +++ + D ER++ L+++              L  EL RA++  P  +P DV+TMNS+
Sbjct: 8   QRQVVVTEFDMERLEALIDKARSTQTRDSKNLKELGEELVRAEVVDPAGIPPDVITMNSK 67

Query: 60  VKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHL 119
           V  ++L   E  V TLV+P +   ++ ++S++APVG A++G R GD I W +PGG+  +L
Sbjct: 68  VCLQDLDSEEELVYTLVFPNEADLASGKISILAPVGTAMIGFRTGDRITWPVPGGM-KNL 126

Query: 120 EVLELEYQPEAAGDYLL 136
           +V ++ YQPEAAGDY L
Sbjct: 127 KVKKILYQPEAAGDYHL 143


>UniRef50_P64276 Transcription elongation factor greA n=48 Tax=delta/epsilon
           subdivisions RepID=GREA_HELPJ
          Length = 164

 Score =  142 bits (358), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 31/135 (22%), Positives = 58/135 (42%), Gaps = 9/135 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHD 52
           + RP I+     A     L E   Y                L+  +  AQ+  P  + H+
Sbjct: 24  VERPNIVKEIDIARGHGDLKENAEYHAAKEKQRFIEARIVDLSEIVANAQVIDPSALAHN 83

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V+  S +K  NL + +    T+V   +   +   +S  +P+  +L+G   GD++  +LP
Sbjct: 84  KVSFGSTIKILNLDNDKEFSYTIVGSVESDPAKGLISFGSPIAKSLIGKSKGDAVSIQLP 143

Query: 113 GGVATHLEVLELEYQ 127
            G +   E+L++ Y+
Sbjct: 144 NGES-DFEILDIYYK 157


>UniRef50_Q1LSK1 Transcription elongation factor greA n=16 Tax=Proteobacteria
           RepID=GREA_BAUCH
          Length = 158

 Score =  142 bits (358), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 30/135 (22%), Positives = 56/135 (41%), Gaps = 10/135 (7%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEM-PH 51
           + RP II N  +A     L E   Y                + ++L  AQ+    ++ P 
Sbjct: 24  VRRPEIIRNIAEAREYGDLKENAEYHAAREQQGFCEGRIQEIESKLSHAQIIDVTKLFPS 83

Query: 52  DVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWEL 111
             V     V  +NL+  E +   +V   +    +  +S+ +P+   L+G + GD +  + 
Sbjct: 84  GKVVFGVTVSVQNLNINEEQTYRIVGDDEANFKHNLISISSPIARGLIGKKKGDIVLIKT 143

Query: 112 PGGVATHLEVLELEY 126
           P G     ++L++EY
Sbjct: 144 PRGEV-KYQILKIEY 157


>UniRef50_B3E3H5 Transcription elongation factor greA n=19 Tax=Proteobacteria
           RepID=GREA_GEOLS
          Length = 158

 Score =  141 bits (357), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 30/134 (22%), Positives = 55/134 (41%), Gaps = 9/134 (6%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHDV 53
            RP +I +  +A     L E   Y                L  +L RA +     +  D 
Sbjct: 26  ERPKVIQDIAEARSHGDLSENAEYDAAKNRQGFIEGRIQELQGKLARAHVVDLTGLKPDK 85

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           V   + V   + +  E     +V   +      ++S  +PVG AL+G ++ DS+  ++P 
Sbjct: 86  VVFGATVTLYDTASEEEITYKIVGEDEADIKLGKISCTSPVGKALIGHKLDDSVKVKVPA 145

Query: 114 GVATHLEVLELEYQ 127
           G     E++E++Y+
Sbjct: 146 GT-KEYEIIEIKYE 158


>UniRef50_A8HR94 Transcription elongation factor greA n=5 Tax=Proteobacteria
           RepID=GREA_AZOC5
          Length = 157

 Score =  140 bits (354), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 30/134 (22%), Positives = 55/134 (41%), Gaps = 9/134 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHD 52
           + RP II    +A     L E   Y                L  ++ RA++    ++  D
Sbjct: 24  VERPRIISAISEARAHGDLSENAEYHAAKELQSLNEGRIAELEDKISRAEVIDVSKLSGD 83

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
           +V   + V   +    E RV  +V  ++      ++S+ +PV  AL+G + G S+    P
Sbjct: 84  IVKFGATVTLVDEDTEEERVWQIVGDSEADAKAGRISISSPVARALIGKKKGSSVEVVTP 143

Query: 113 GGVATHLEVLELEY 126
            G     E++E+ +
Sbjct: 144 KGA-RSFEIVEVRW 156


>UniRef50_Q3BX42 Regulator of nucleoside diphosphate kinase n=9
           Tax=Gammaproteobacteria RepID=Q3BX42_XANC5
          Length = 146

 Score =  140 bits (353), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 58/131 (44%), Positives = 84/131 (64%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFR 63
           P+I+++  D  R++ LL+ PA+   P A AL+ EL RA++  P+++P DVVTM+SR++  
Sbjct: 11  PSILVSSHDLARLEALLDSPAFNKHPAATALSDELGRARVLPPDQIPGDVVTMHSRIECE 70

Query: 64  NLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLE 123
           +   GE    TLVYP +    + ++SV+APVG+ALLGL VG SI W  P G    L V  
Sbjct: 71  DQLHGERHTLTLVYPHEADVQHGRISVLAPVGSALLGLSVGQSIDWRTPDGRDLRLRVTA 130

Query: 124 LEYQPEAAGDY 134
           +  QP AAGD+
Sbjct: 131 VHDQPAAAGDF 141


>UniRef50_P0AFW6 Regulator of nucleoside diphosphate kinase n=155
           Tax=Enterobacteriaceae RepID=RNK_ECO57
          Length = 136

 Score =  140 bits (353), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 136/136 (100%), Positives = 136/136 (100%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV
Sbjct: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
           KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE
Sbjct: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120

Query: 121 VLELEYQPEAAGDYLL 136
           VLELEYQPEAAGDYLL
Sbjct: 121 VLELEYQPEAAGDYLL 136


>UniRef50_B9KH08 Transcription elongation factor n=9 Tax=Rickettsiales
           RepID=B9KH08_ANAMF
          Length = 174

 Score =  138 bits (349), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 31/137 (22%), Positives = 54/137 (39%), Gaps = 12/137 (8%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHDV 53
            RP II +  DA  +  L E   Y                L ++  RA++    E+  D 
Sbjct: 37  ERPKIIKSISDARELGDLSENAEYHAARERQGLVESKIMELESKRSRAEVIDVSELSGDT 96

Query: 54  VTMNSRVKF----RNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHW 109
           V   + V             V    +V   +   S   +S+ +P+  +LLG R GDS+  
Sbjct: 97  VMFGATVTVSVYDEQTDSTGVMQYQIVGEYEADVSKNMISIKSPLVLSLLGRREGDSVEV 156

Query: 110 ELPGGVATHLEVLELEY 126
           + P G     +++++E+
Sbjct: 157 KTPRGDYKIYQIMKIEF 173


>UniRef50_C0QKN0 Transcription elongation factor n=1 Tax=Desulfobacterium
           autotrophicum HRM2 RepID=C0QKN0_DESAH
          Length = 175

 Score =  138 bits (349), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 34/132 (25%), Positives = 54/132 (40%), Gaps = 9/132 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHD 52
           + RP  I     A     L E   +                L  ++  A++  P  +  D
Sbjct: 44  IERPQNIKAIEIARAHGDLSENAEFDAAKDRQSFIEGRIGELGYKIASAKIIDPATVSKD 103

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V   SRV   NL  GE     +V   +      ++SV +P+G ALLG + GD I  + P
Sbjct: 104 CVRFASRVVIENLDSGEEVEYMIVGQEESDIHKGKISVSSPLGMALLGKQPGDEIVIQAP 163

Query: 113 GGVATHLEVLEL 124
           GG   + E++++
Sbjct: 164 GGK-RNYEIVDI 174


>UniRef50_Q0A765 Transcription elongation factor greA n=23 Tax=Proteobacteria
           RepID=GREA_ALHEH
          Length = 158

 Score =  138 bits (349), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 30/135 (22%), Positives = 50/135 (37%), Gaps = 10/135 (7%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPH- 51
           + RP II    +A     L E   Y                +  +L  AQ+  P  +   
Sbjct: 24  VERPRIIQAIAEAREHGDLKENAEYHAAREQQSFVEGRIQEIEGKLSNAQVIDPAAVNAQ 83

Query: 52  DVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWEL 111
             V   + V   +   G+     +V   +       +SV +P+  AL+G   GD +  + 
Sbjct: 84  GKVIFGATVDLVDEDSGKEVTYQIVGEDEADIKQGLVSVNSPIARALIGKEEGDLVTVQA 143

Query: 112 PGGVATHLEVLELEY 126
           PGG     E++E+ Y
Sbjct: 144 PGGE-REYEIVEVRY 157


>UniRef50_Q4HT85 Transcription elongation factor n=1 Tax=Campylobacter upsaliensis
           RM3195 RepID=Q4HT85_CAMUP
          Length = 161

 Score =  138 bits (348), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 34/134 (25%), Positives = 52/134 (38%), Gaps = 9/134 (6%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHDVV 54
           RP +++    A     L E   Y                L   L RAQ+  P    H+ V
Sbjct: 26  RPAVVVEIDVARSHGDLKENAEYHAAREKQALIESRIAELGGILSRAQVIDPASYEHESV 85

Query: 55  TMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGG 114
              S V   +L   +    TLV   +       +S+ +P+  A+LG + GD     LP G
Sbjct: 86  KFGSSVLIMDLESEKESKYTLVGTCESDLEKGYISIASPLARAMLGKKEGDEFKVRLPKG 145

Query: 115 VATHLEVLELEYQP 128
            +   E+L + Y+P
Sbjct: 146 ES-EFEILSVTYEP 158


>UniRef50_B2S6W5 Transcription elongation factor greA n=39 Tax=Bacteria
           RepID=GREA_BRUA1
          Length = 157

 Score =  138 bits (348), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 53/133 (39%), Gaps = 9/133 (6%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHDV 53
            RP II    +A     L E   Y              + L   + RA++    ++  D 
Sbjct: 25  ERPRIIEAIAEARAHGDLSENAEYHAAKEAQSLNEGRINELEDLVARAEVIDVSKLTGDR 84

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           +   + V   +    E ++  +V   +      ++S+ +P+  AL+G   GD+I    PG
Sbjct: 85  IKFGATVTMIDEDTEEEKIYQIVGDQEADVKEGRISISSPIARALIGKGEGDTIEVNAPG 144

Query: 114 GVATHLEVLELEY 126
           G     E++ L++
Sbjct: 145 GS-RSYEIIALKF 156


>UniRef50_Q6MQZ8 Regulator of nucleoside diphosphate kinase n=1 Tax=Bdellovibrio
           bacteriovorus RepID=Q6MQZ8_BDEBA
          Length = 138

 Score =  137 bits (347), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 59/133 (44%), Positives = 83/133 (62%), Gaps = 3/133 (2%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFR 63
           P I++ D D  R+  L+ Q      P A+AL  EL RA + + +E+P +VVTMNSRV+F 
Sbjct: 9   PRILVTDQDFHRLSALVSQVEG---PFAEALEEELSRANVIAQKEIPKNVVTMNSRVQFL 65

Query: 64  NLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLE 123
           +   G+    TLVYP        +LS++APVG ALLGL VG  I+W+LP G +  L+V  
Sbjct: 66  DEVSGQESEMTLVYPQDAKLEEGRLSILAPVGIALLGLSVGQEINWKLPNGQSKKLKVQA 125

Query: 124 LEYQPEAAGDYLL 136
           + YQPEA+G++ L
Sbjct: 126 VTYQPEASGNFDL 138


>UniRef50_A3ESJ0 Transcription elongation factor n=4 Tax=Bacteria RepID=A3ESJ0_9BACT
          Length = 160

 Score =  137 bits (346), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 32/133 (24%), Positives = 53/133 (39%), Gaps = 9/133 (6%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHDVV 54
           RP  I +  +A     L E   Y                L A++  A + S     H  +
Sbjct: 26  RPKNIQDIAEARAHGDLSENAEYHAAKERQGFINSRIKELEAKIASAIVVSSAHQDHSRI 85

Query: 55  TMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGG 114
           T  + V+   L   E +  TLV   +      ++SV +PVG AL+G   G+++   +P G
Sbjct: 86  TFGATVRLVPLDSKEEKRYTLVGQEEADLKAGRISVHSPVGKALIGHSEGETVTIRVPAG 145

Query: 115 VATHLEVLELEYQ 127
                 + E+ Y+
Sbjct: 146 EVQ-YTIAEIFYE 157


>UniRef50_A0LL17 GreA/GreB family elongation factor n=3 Tax=Bacteria
           RepID=A0LL17_SYNFM
          Length = 141

 Score =  137 bits (346), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 50/140 (35%), Positives = 78/140 (55%), Gaps = 6/140 (4%)

Query: 2   SRPTIIINDLDAERIDILLE-----QPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTM 56
            R  I ++D D +R++ L+E     +           L  EL +A++ +   +P D VTM
Sbjct: 3   KRRKIYVSDYDMKRLEKLIELLSEDEWDDRDTKHLQVLEEELRKAEVVAARNIPRDTVTM 62

Query: 57  NSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVA 116
           NS+V+ ++L  G   +  LV+P +      ++SV+AP+G AL+G  VGD I W +P G  
Sbjct: 63  NSKVRVKDLDTGIETIYHLVFPGEADVKQNRISVLAPIGTALIGYAVGDVIQWNVPAGT- 121

Query: 117 THLEVLELEYQPEAAGDYLL 136
             L + E+ YQPEAAGD+ L
Sbjct: 122 KKLRIEEILYQPEAAGDFHL 141


>UniRef50_B8GS58 GreA/GreB family elongation factor n=22 Tax=Proteobacteria
           RepID=B8GS58_THISH
          Length = 137

 Score =  137 bits (345), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 59/133 (44%), Positives = 86/133 (64%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKF 62
           +P+I ++ LD +R++ LL+      L     L AEL+RA +  P ++P  +VTMNSRV+F
Sbjct: 4   QPSITLSSLDLDRLEHLLDSLPREALANHRQLLAELERANVVEPSQVPPTLVTMNSRVRF 63

Query: 63  RNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVL 122
           R   +G    RTLVYP+ M     ++SV+AP+G+ALLGL VGDSI W  P G   ++ ++
Sbjct: 64  RVEPEGREFQRTLVYPSGMDGDEEKISVLAPIGSALLGLSVGDSIAWPTPKGGEMNVRIM 123

Query: 123 ELEYQPEAAGDYL 135
           E+ YQPEAAG+  
Sbjct: 124 EILYQPEAAGEMH 136


>UniRef50_A8F083 Transcription elongation factor greA n=13 Tax=Rickettsia
           RepID=GREA_RICCK
          Length = 162

 Score =  136 bits (344), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 28/136 (20%), Positives = 51/136 (37%), Gaps = 9/136 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHD 52
           + R  I  +  +A     L E   Y                L     RA++    ++  D
Sbjct: 25  VERKKISEDIAEAREHGDLSENAEYEAAREKQAFIEGRIKELEDMAARAEIIDISKLSGD 84

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            +   + V   +    E     +V   +   +  ++S+ +P+  AL+G  VGD +    P
Sbjct: 85  NIKFGATVTLIDDDTEEKVTYIVVGEYEADITRKRVSIASPIAKALIGKSVGDFVEVTTP 144

Query: 113 GGVATHLEVLELEYQP 128
            G     EV+E+EY+ 
Sbjct: 145 KGS-KSYEVVEVEYKA 159


>UniRef50_D0LKY5 Transcription elongation factor n=1 Tax=Haliangium ochraceum DSM
           14365 RepID=D0LKY5_HALO1
          Length = 169

 Score =  135 bits (341), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 29/136 (21%), Positives = 54/136 (39%), Gaps = 9/136 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHD 52
           + RP        A     L E   Y                  A+L  +++  P ++  +
Sbjct: 25  VDRPANAKAIEVARGHGDLSENADYDAAKEEQGMIEARIREYEAKLALSEVIDPTKLSGE 84

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V   + V   ++  G+    T+V   +    N ++SV APV  AL+G  +GD    + P
Sbjct: 85  RVKFGATVTVEDIDTGDEATYTIVGEHEADIKNKRISVTAPVARALIGKAIGDETQVQTP 144

Query: 113 GGVATHLEVLELEYQP 128
            G     E++++++ P
Sbjct: 145 KGT-RAFEIVDVKWLP 159


>UniRef50_A6LPL4 Transcription elongation factor greA n=30 Tax=Clostridia
           RepID=GREA_CLOB8
          Length = 160

 Score =  135 bits (340), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 35/134 (26%), Positives = 56/134 (41%), Gaps = 9/134 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHD 52
           + R  I      A     L E   Y                L   L  A +    E+P D
Sbjct: 27  VKRKEITEKIKIALGYGDLSENSEYDEAKNDQAFTEGRIIQLENMLKNAVVVDESEIPSD 86

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
           +V++ S+VK ++    E    ++V  A+    N ++S  +PVG AL+G +VGD +   +P
Sbjct: 87  IVSVGSKVKVKDYEFDEEVEYSIVGSAEADPMNFKISNESPVGNALVGKKVGDVVEVTVP 146

Query: 113 GGVATHLEVLELEY 126
            GV    E+L +  
Sbjct: 147 DGVN-KFEILGISR 159


>UniRef50_A0AIU5 Transcription elongation factor greA n=99 Tax=Bacteria
           RepID=GREA_LISW6
          Length = 160

 Score =  135 bits (340), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 53/133 (39%), Gaps = 9/133 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHD 52
           + R  ++     A     L E   Y                +   +  AQ+    E  + 
Sbjct: 27  VKRKEVVERIKIARSFGDLSENSEYDSAKDEQAFVEGRITTIENMIRNAQIIDAAEAHNG 86

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
           +VT+ + V F  L DGE    T+V  A+      ++S  +P+   LLG + G+ +  + P
Sbjct: 87  LVTLGNTVTFIELPDGEEETYTIVGSAEADPFEGKISNDSPIAKGLLGHKEGEEVTIQTP 146

Query: 113 GGVATHLEVLELE 125
            G   ++++ ++ 
Sbjct: 147 AG-DMNVKIEKIT 158


>UniRef50_Q725M4 Transcription elongation factor greA n=4 Tax=Desulfovibrionaceae
           RepID=GREA_DESVH
          Length = 163

 Score =  134 bits (339), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 31/133 (23%), Positives = 54/133 (40%), Gaps = 9/133 (6%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHDV 53
            RP +I    +A     L E   Y                + + + +  +   + +  D 
Sbjct: 24  ERPGVIQAIKEAREEGDLSENAGYDAARERQGMLEARIKYIESRMAQFNVIDLDTISGDK 83

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           V   + VK  +L  GE +  TL+ P +   +   +SV +PV  A+LG   GD I  + P 
Sbjct: 84  VMFGATVKIEDLESGEEKEYTLLGPDEADYAKGSISVQSPVARAMLGKEEGDEIVVDAPR 143

Query: 114 GVATHLEVLELEY 126
           G   H E++ + +
Sbjct: 144 GKI-HYEIVSIRF 155


>UniRef50_B4UCU9 Transcription elongation factor greA n=588 Tax=Bacteria
           RepID=GREA_ANASK
          Length = 166

 Score =  134 bits (339), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 48/134 (35%), Gaps = 9/134 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHD 52
           + RP I+    +A     L E   Y                +   +  A++    +   D
Sbjct: 24  VERPKIVKEIAEARAHGDLSENAEYHAAKEKQSHIEGRIAQVEHWIASAEVIDVTKHAGD 83

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V   + V   +   G+     +V   +      ++SV +P+  AL+G   GD++    P
Sbjct: 84  RVVFGATVSLEDAESGDQVTYRIVGELEADLKQGKISVTSPIARALIGRSEGDTVVVRSP 143

Query: 113 GGVATHLEVLELEY 126
           GG     E+  + +
Sbjct: 144 GGE-KEYEIQSVAF 156


>UniRef50_C7GYY1 Transcription elongation factor n=1 Tax=Eubacterium saphenum ATCC
           49989 RepID=C7GYY1_9FIRM
          Length = 158

 Score =  134 bits (338), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 51/133 (38%), Gaps = 8/133 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHD 52
           + R  +     +A     L E   Y                L   L+  ++        D
Sbjct: 25  VRRKEVADRIKEATAYGDLSENSEYDAAKNEQAELEERISVLEDMLNNYEIIDSNAAKGD 84

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
           VV +   V  +N++  +     +V  A+    N  +S  +P+G  LL  +VG+++  ++P
Sbjct: 85  VVDLGLNVHLKNITKKKEETYRIVGSAEADPFNNLISNESPIGKGLLKHKVGETVSIDIP 144

Query: 113 GGVATHLEVLELE 125
            G     ++L++ 
Sbjct: 145 SGKTVKYKILKIS 157


>UniRef50_Q04EK0 Transcription elongation factor greA n=4 Tax=Bacilli
           RepID=GREA_OENOB
          Length = 162

 Score =  134 bits (337), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 31/132 (23%), Positives = 54/132 (40%), Gaps = 8/132 (6%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHDV 53
            RP I     +A     L E   Y                L   +  AQ+        +V
Sbjct: 28  KRPAITSRIQEARSFGDLSENSEYQSAKDEQAFVEGRVKQLQQMIQFAQVIDASSASKNV 87

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           VT+  ++ F+ + DG+    T+V  A+    + ++S  +P+G ALL  + GD +   LP 
Sbjct: 88  VTLGKKISFKEVPDGDEETYTIVGSAESDPLSGKISNDSPMGKALLDHKTGDKVEIPLPE 147

Query: 114 GVATHLEVLELE 125
             +  +E+L + 
Sbjct: 148 NHSVTVEILHVS 159


>UniRef50_Q97EB6 Transcription elongation factor greA n=6 Tax=Clostridiales
           RepID=GREA_CLOAB
          Length = 158

 Score =  133 bits (335), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 32/132 (24%), Positives = 55/132 (41%), Gaps = 9/132 (6%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHDV 53
            R  I      A     L E   Y                +   L  A +    E+ +DV
Sbjct: 28  KRKEITEKIKVALSFGDLSENSEYDEAKNDQAFVEGRIAQIENMLKNANVIDESELKNDV 87

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           V++ S+V  ++    E    ++V  A+      ++S  +PVG+AL+G +VGD I   +P 
Sbjct: 88  VSVGSKVMVKDYQFDEEIEFSIVGSAEADPIENKISNESPVGSALIGKKVGDEIEVNVPD 147

Query: 114 GVATHLEVLELE 125
           GV    ++L ++
Sbjct: 148 GVD-KYKILAIK 158


>UniRef50_Q7UVA0 Transcription elongation factor greA n=3 Tax=Planctomycetaceae
           RepID=GREA_RHOBA
          Length = 159

 Score =  132 bits (333), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 54/133 (40%), Gaps = 9/133 (6%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHDV 53
             P I+    +A     L E   Y              + L  ++ RA +     +P D 
Sbjct: 26  EMPMIVQKIAEAREEGDLKENAEYHAQRENQGMLMAKINELRDKIARASIIDVSSLPKDE 85

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           V     V   +++ G+    TLV        + ++ V +P G  L+G +VG++   ++P 
Sbjct: 86  VVFGCTVTVEDVAYGDEEQFTLVGAGDEDYDSGKILVTSPFGQGLVGKKVGETAEVDVPA 145

Query: 114 GVATHLEVLELEY 126
           G     ++L++E+
Sbjct: 146 GK-LKFKILKIEF 157


>UniRef50_D1B0C0 Transcription elongation factor n=4 Tax=Campylobacteraceae
           RepID=D1B0C0_SULD5
          Length = 167

 Score =  131 bits (331), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 47/132 (35%), Gaps = 9/132 (6%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHDVV 54
           RP  +I    A     L E   Y                L+  + R+Q+  P    HD V
Sbjct: 27  RPETVIELDIARSHGDLKENAEYHAAKEKLAFIDSRIAELSDLVSRSQVIDPSTYEHDKV 86

Query: 55  TMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGG 114
              S +   NL   E    ++V   +       +S  +P+   L+G  V + +  +LP G
Sbjct: 87  RFGSTITLENLETNEEVTYSIVGSTESNPDLGLISYHSPLSKQLMGRCVDEEVMIKLPVG 146

Query: 115 VATHLEVLELEY 126
                 +L + Y
Sbjct: 147 T-QEYAILNITY 157


>UniRef50_Q057J4 Transcription elongation factor greA n=20 Tax=Proteobacteria
           RepID=GREA_BUCCC
          Length = 159

 Score =  131 bits (330), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 30/135 (22%), Positives = 55/135 (40%), Gaps = 10/135 (7%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMP-H 51
           ++RP I+    +A ++  L E   Y                +  +L RAQ+    ++P  
Sbjct: 25  ITRPCIVKAIANARQLGDLKENAEYHSAREEQSFCENRICEIENKLLRAQIIDITKIPFK 84

Query: 52  DVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWEL 111
            +V   S V    +S   + V T+V   +       +S+ +P+  AL+G +  D I    
Sbjct: 85  GIVIFGSTVTVLQISTSNIFVYTIVGDDEANYKEFSISIHSPMSRALIGKKKNDIIKVNT 144

Query: 112 PGGVATHLEVLELEY 126
           P G      + ++EY
Sbjct: 145 PTGYI-KYIIKKIEY 158


>UniRef50_Q817Z6 Transcription elongation factor greA n=141 Tax=cellular organisms
           RepID=GREA_BACCR
          Length = 158

 Score =  130 bits (328), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 53/133 (39%), Gaps = 9/133 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHD 52
           + R  ++     A     L E   Y                L   +  A +         
Sbjct: 27  VRRKEVVERIKIARSFGDLSENSEYDAAKDEQAFVEGRITQLENMIRNAVIIKDTGEVST 86

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
           VVT+   V F+ L +G+    T+V  A+      ++S  +P+  +LLG ++G+ +  + P
Sbjct: 87  VVTLGKTVTFKELPNGDEEAYTIVGSAEADPFEGRISNDSPIAKSLLGKQIGEKVTIQTP 146

Query: 113 GGVATHLEVLELE 125
           GG    +E++ ++
Sbjct: 147 GGE-MQVEIVSVK 158


>UniRef50_Q7VM42 Transcription elongation factor greB n=27 Tax=Proteobacteria
           RepID=GREB_HAEDU
          Length = 162

 Score =  130 bits (328), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 50/134 (37%), Gaps = 10/134 (7%)

Query: 2   SRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMPHDV 53
            RP +  +  +A  +    E   Y                L+  L+  Q+          
Sbjct: 26  ERPKVTQSVSEAAALGDRSENAEYIYGKRRLREIDRRIRFLSKRLEALQIIDYHPQQAGK 85

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           V   + ++  N ++GE+    +V   +   +   +S+ +PV  AL+G  V D I  + P 
Sbjct: 86  VFFGAWIELEN-NEGEINQYRIVGCDEFDPTKNWISIDSPVARALIGKCVDDEIEVQTPT 144

Query: 114 GVATHLEVLELEYQ 127
           G A    + ++ Y 
Sbjct: 145 GKAVFY-INKIWYD 157


>UniRef50_A8SDG2 Transcription elongation factor n=2 Tax=Clostridiales
           RepID=A8SDG2_9FIRM
          Length = 161

 Score =  130 bits (328), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 30/134 (22%), Positives = 48/134 (35%), Gaps = 8/134 (5%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHD 52
           + R  +     +A     L E   Y                L   +  A +    E+  D
Sbjct: 25  VRRKELAEEIKEARSHGDLSENSEYDEAKNTQGLVENRITELEQTIKNAVIIDESELSVD 84

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V++ + V  R   + E     +V   +    N ++S  +PVG AL+G  VGD     LP
Sbjct: 85  NVSVGTHVTIRETGEDEAEEYDIVGRTEADAFNGKISDESPVGHALMGKAVGDKAEVLLP 144

Query: 113 GGVATHLEVLELEY 126
            G      VL + +
Sbjct: 145 TGQTVVYTVLAITH 158


>UniRef50_A5CVW9 Transcription elongation factor greA n=4 Tax=Gammaproteobacteria
           RepID=GREA_VESOH
          Length = 159

 Score =  130 bits (328), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 51/135 (37%), Gaps = 10/135 (7%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHD 52
           +SRP II +   A     L E   Y                +  +L R Q+    ++  D
Sbjct: 24  VSRPRIIEDIRIARAHGDLKENAEYHAAKEEQSFVEGRIKEIELKLSRMQIIDVTKLSQD 83

Query: 53  -VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWEL 111
                 + +   N  D       +V   +   S  ++S  +P+ +AL+G   GD +  + 
Sbjct: 84  GRCVFGTTITLMNSVDNSEITYQIVGEDEADISLDKISCHSPIASALMGNEEGDKVIVKA 143

Query: 112 PGGVATHLEVLELEY 126
           P G     ++L +EY
Sbjct: 144 PKGDIV-YKILSVEY 157


>UniRef50_Q1H3Z9 GreA/GreB family elongation factor n=1 Tax=Methylobacillus
           flagellatus KT RepID=Q1H3Z9_METFK
          Length = 138

 Score =  130 bits (327), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 56/139 (40%), Positives = 82/139 (58%), Gaps = 4/139 (2%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPI---ADALNAELDRAQMCSPEEMPHDVVTMN 57
           M +  I +   D +R+  ++EQ    G P       L  EL R++    E++  DVVTMN
Sbjct: 1   MLQGAIQVTSFDMDRLFSMIEQLRKNGFPETDNLARLEDELARSEEVPSEQVGADVVTMN 60

Query: 58  SRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVAT 117
           SRV  R+ ++G     TLV+P+    S  ++SV+AP+G A+LG RVGD I W +PGG   
Sbjct: 61  SRVLLRDEANGHEMSCTLVFPSDADASANRISVVAPLGTAILGYRVGDVIDWAMPGG-VR 119

Query: 118 HLEVLELEYQPEAAGDYLL 136
              +L+++YQPEAAGD+ L
Sbjct: 120 QYRILKIDYQPEAAGDFHL 138


>UniRef50_D2R891 Transcription elongation factor GreA n=1 Tax=Pirellula staleyi DSM
           6068 RepID=D2R891_9PLAN
          Length = 164

 Score =  130 bits (327), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 32/135 (23%), Positives = 57/135 (42%), Gaps = 9/135 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHD 52
           +  P I     DA     L E   Y              + +  +L +A +  P  MP D
Sbjct: 25  VDMPDITQKIADARAEGDLKENAEYHAQREAQGLLQAKINLIRNKLSKASIIDPSTMPRD 84

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V+  + V  +++   E    TLV   +   +  ++ + +P+G AL+G ++GD +    P
Sbjct: 85  QVSFGTTVLVKDIDMDEEEEFTLVGAGEEDYNAGRILITSPLGQALVGKKIGDVVDVPAP 144

Query: 113 GGVATHLEVLELEYQ 127
            G    LE+L L++ 
Sbjct: 145 KGS-YQLEILTLKFD 158


>UniRef50_C6RP41 GreA/GreB family elongation factor n=4 Tax=Acinetobacter
           RepID=C6RP41_ACIRA
          Length = 134

 Score =  130 bits (327), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 50/134 (37%), Positives = 74/134 (55%), Gaps = 1/134 (0%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           M++P III+  D  R++ +LE  +       + L  EL RA++  P E+P +VV+MN+RV
Sbjct: 1   MAKPNIIISSQDLHRLETMLEHQS-HMTQTIEHLEDELARAEVVEPHEIPANVVSMNTRV 59

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
                   E     LVYP        Q++V+AP+GAA+LGL  G  I W  P G    ++
Sbjct: 60  LITIAPSTEPTEIQLVYPHDFRGDKGQVNVLAPIGAAILGLAEGQEIEWPQPDGHLMKVK 119

Query: 121 VLELEYQPEAAGDY 134
           + ++ YQPE  GDY
Sbjct: 120 IEKVLYQPEREGDY 133


>UniRef50_Q2LR03 Transcription elongation factor greA n=1 Tax=Syntrophus
           aciditrophicus SB RepID=GREA_SYNAS
          Length = 161

 Score =  130 bits (327), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 31/136 (22%), Positives = 52/136 (38%), Gaps = 9/136 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHD 52
           +  P  I +   A     L E   Y                L   L  + +   + +  D
Sbjct: 24  VLIPANIKDIEIARAHGDLSENAEYTAAKEKQSFLHGKLQELENNLALSNVIDLKMLSDD 83

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            +   + V     S G+     LV P +   S  ++SV +P+G AL+G  +GD +    P
Sbjct: 84  RIVFGATVIIEEASTGKQTNYQLVGPFESNISENKISVTSPIGKALIGKSIGDEVKVHTP 143

Query: 113 GGVATHLEVLELEYQP 128
           GG   + EV+++   P
Sbjct: 144 GG-IRNFEVVDIYINP 158


>UniRef50_A5V3E1 Transcription elongation factor greA n=13 Tax=Proteobacteria
           RepID=GREA_SPHWW
          Length = 158

 Score =  129 bits (326), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 50/133 (37%), Gaps = 10/133 (7%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHDV 53
            RP II    +A     L E   Y                +   L RAQ+  P  +  D 
Sbjct: 27  ERPLIIDAIEEARAHGDLSENAEYHAAKERQGQIEASIADIEDRLSRAQVIDPSMLSGDK 86

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           +   + V   +  D +     +V   +      ++S  +P+G AL+G +V D +   +P 
Sbjct: 87  IVFGATVTLLD-DDEKPVRYQIVGQTEADAKTGKISYNSPLGRALIGKKVDDEVEVTVPS 145

Query: 114 GVATHLEVLELEY 126
           G      V ++E+
Sbjct: 146 G-DRFYLVSKIEF 157


>UniRef50_Q7MD62 Transcription elongation factor n=10 Tax=Proteobacteria
           RepID=Q7MD62_VIBVY
          Length = 135

 Score =  129 bits (325), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 56/131 (42%), Positives = 85/131 (64%), Gaps = 2/131 (1%)

Query: 6   IIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNL 65
           I ++ LD +RI  LLE+      P  + L  ELDRA + +P++MP ++VTMNS V+F  +
Sbjct: 7   ICVSTLDMDRISALLEK-MANLSPELEKLENELDRANVLAPQQMPDNIVTMNSTVRFTFV 65

Query: 66  SDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
              +V  +TLVYP ++ + +  +S+ APVG+ALLGL VG  + W +PGG    +E+LE+ 
Sbjct: 66  GSDKVMEKTLVYPDQVRNPDD-VSIFAPVGSALLGLSVGQQLTWPMPGGAERTIEILEVT 124

Query: 126 YQPEAAGDYLL 136
           YQPE  G++ L
Sbjct: 125 YQPERMGEFHL 135


>UniRef50_B9NGJ6 Predicted protein n=12 Tax=cellular organisms RepID=B9NGJ6_POPTR
          Length = 145

 Score =  128 bits (323), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 52/136 (38%), Positives = 83/136 (61%), Gaps = 3/136 (2%)

Query: 2   SRPT-IIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           SRP  + + +LD  R++ +  +       + + L+A L+RA + SP+ +P DVVTMNSRV
Sbjct: 12  SRPATLYLTELDVTRLEGIASRA--GTAELDEMLDALLERAAIVSPDAIPKDVVTMNSRV 69

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
                 + + R  TLVYP     +  +LSV++P+G ALLG R GD++ + LP G A  + 
Sbjct: 70  VCALEGEAKPRDWTLVYPDDADLATGRLSVLSPIGQALLGARSGDTVDYRLPDGRAQRVT 129

Query: 121 VLELEYQPEAAGDYLL 136
           ++E+ +QPEA+G + L
Sbjct: 130 IVEIAFQPEASGQFTL 145


>UniRef50_C4XLU8 Transcription elongation factor greA n=11 Tax=Desulfovibrionales
           RepID=GREA_DESMR
          Length = 164

 Score =  128 bits (322), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 34/139 (24%), Positives = 62/139 (44%), Gaps = 10/139 (7%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHDVVT 55
           P +I+   +A     L E   Y              + + + + R  +     +  + V 
Sbjct: 26  PGVILAIKEAREEGDLRENAGYEAARERQGMLEARINYIESRMSRFNVIDLATLGGEQVI 85

Query: 56  MNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGV 115
             + V+  ++  G+V+  TL+ P +   S   +S+++PVG ALLG  VGD I  + P G 
Sbjct: 86  FGATVEIEDVDTGDVKKYTLLGPDEAEPSKGSISLLSPVGLALLGKFVGDEIVVDAPRGK 145

Query: 116 ATHLEVLELEYQ-PEAAGD 133
             + E++ + +  P AA D
Sbjct: 146 I-NYEIVSIAFHGPIAAAD 163


>UniRef50_Q11P04 Transcription elongation factor n=1 Tax=Cytophaga hutchinsonii ATCC
           33406 RepID=Q11P04_CYTH3
          Length = 149

 Score =  128 bits (322), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 39/107 (36%), Positives = 64/107 (59%), Gaps = 1/107 (0%)

Query: 30  IADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLS 89
            A++L  EL   ++  PEE+P++VVTM+S V    +   +     LVYP K    N ++S
Sbjct: 44  EANSLMNELKLGKLVEPEEIPNNVVTMHSIVTIVFMDSNKRVEFQLVYPDKADVKNNKIS 103

Query: 90  VMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQPEAAGDYLL 136
           + +P+  AL+G ++GD I W +P G+   +++  + YQPEAAG + L
Sbjct: 104 IFSPIATALIGYQIGDEIEWCVPAGMT-KIKIESIAYQPEAAGHFNL 149


>UniRef50_C9RKD0 Transcription elongation factor n=1 Tax=Fibrobacter succinogenes
           subsp. succinogenes S85 RepID=C9RKD0_FIBSS
          Length = 151

 Score =  127 bits (321), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 32/132 (24%), Positives = 56/132 (42%), Gaps = 11/132 (8%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPI---------ADALNAELDRAQMCSPEEMPH 51
           + RP ++   +DA     L E   Y                 L  +L RAQ+ + +    
Sbjct: 20  VERPRVLQELVDARAQGDLSENAEYHAAKERLASIDNIEMPKLQDQLARAQVIAFDANS- 78

Query: 52  DVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWEL 111
           D +   + +  +NL      V  LV P +    N ++S  +P+GAAL+G + GD++    
Sbjct: 79  DTIKFGATITAKNLKTKREIVYQLVSPEEADALNGKISFKSPIGAALMGKKRGDTVEVVT 138

Query: 112 PGGVATHLEVLE 123
           P G     E+++
Sbjct: 139 PKGKNQ-FEIID 149


>UniRef50_Q1H0G6 GreA/GreB family elongation factor n=3 Tax=Proteobacteria
           RepID=Q1H0G6_METFK
          Length = 165

 Score =  127 bits (321), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 52/141 (36%), Gaps = 10/141 (7%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEM-PH 51
           + RP ++ +   A       E   Y                L   +D A +  P +    
Sbjct: 26  VERPKVVSDVAWAASNGDRSENGDYIYGKKRLRQIDSRLRFLMKRMDIAVVVDPAQQQDL 85

Query: 52  DVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWEL 111
           + +   + V+  ++         +V   ++      +S ++P+  ALLG + GD I  E 
Sbjct: 86  EKIYFGAWVELYSIDKDSEHHYRIVGQDELDPGKGYISWISPLARALLGKQPGDVIRVET 145

Query: 112 PGGVATHLEVLELEYQPEAAG 132
           P G     E++++ Y P   G
Sbjct: 146 PAGEER-FEIVDVSYHPPGQG 165


>UniRef50_A9WK05 Transcription elongation factor greA n=6 Tax=Chloroflexi (class)
           RepID=GREA_CHLAA
          Length = 157

 Score =  127 bits (320), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 31/133 (23%), Positives = 52/133 (39%), Gaps = 9/133 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHD 52
           + R  I      A+ +  + E   Y                L   L RA++   ++  + 
Sbjct: 26  VERKQIAERIAAAKELGDISESGEYEDAKKAQALLEGRIRELKHLLSRAEVIDEDQASNG 85

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V + S V  R   DG     T+V  A+      ++S  +P+GAALLG R  + +    P
Sbjct: 86  EVRVGSSVTVRFEDDGTEETWTIVGSAEANPRQGRISNESPLGAALLGKRARNKVTVHTP 145

Query: 113 GGVATHLEVLELE 125
            G    L +L++ 
Sbjct: 146 SG-VMKLTILKVR 157


>UniRef50_B1MX52 Transcription elongation factor greA n=11 Tax=Firmicutes
           RepID=GREA_LEUCK
          Length = 160

 Score =  127 bits (320), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 8/131 (6%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHDVV 54
           RP I      A     L E   Y                L   ++ A++  P     DVV
Sbjct: 29  RPEITNRIQIARSYGDLSENSEYQSAKDEQAFVEGRILTLKKMIENAEIIDPNATAADVV 88

Query: 55  TMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGG 114
           ++   V F+ L D E     +V   +      ++S  + +  ALL  +VGD +   LP G
Sbjct: 89  SLGKTVTFKELPDEEPETYAIVGSTESDPLAGKISNESAMAVALLDKKVGDKVSVPLPSG 148

Query: 115 VATHLEVLELE 125
            +  +E+L++E
Sbjct: 149 ESIDVEILKVE 159


>UniRef50_C9RNS9 GreA/GreB family elongation factor n=1 Tax=Fibrobacter succinogenes
           subsp. succinogenes S85 RepID=C9RNS9_FIBSS
          Length = 169

 Score =  127 bits (319), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 29/134 (21%), Positives = 53/134 (39%), Gaps = 9/134 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMPHD 52
           + RP +I     A       E  AY                L+  LD AQ+         
Sbjct: 37  VERPAMINQVQAAAAEGDRSENAAYTYGRMRVREIDRRLRELDRILDGAQIVENAATKDG 96

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            +   + VK  +      ++ ++V   ++     ++S+ +P+G AL G + GD++  + P
Sbjct: 97  SIRFGATVKMIDKKTKREKIYSIVGDKEIDPLQGRISMKSPIGEALQGKKAGDTVEVQAP 156

Query: 113 GGVATHLEVLELEY 126
            G     E+LE+ Y
Sbjct: 157 RGKIV-YEILEVNY 169


>UniRef50_B0SEQ9 Transcription elongation factor n=2 Tax=Leptospira biflexa serovar
           Patoc RepID=B0SEQ9_LEPBA
          Length = 138

 Score =  127 bits (319), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 46/139 (33%), Positives = 74/139 (53%), Gaps = 7/139 (5%)

Query: 2   SRPTIIINDLDAERIDILLEQPAY----AGLPIADALNAELDRAQMCSPEEMPHDVVTMN 57
           ++  I I +LD  R+  ++    Y            L  E++RAQ    +++P +VVTMN
Sbjct: 3   TKKKISITNLDYIRLKKMI--LEYSKRNKTDANVQDLLGEIERAQKVDSKQIPSNVVTMN 60

Query: 58  SRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVAT 117
           S ++ +NL   E +   LVYP        Q+S++AP+  A +G + GD I W +P G   
Sbjct: 61  SVIEIKNLEGIEFKEFRLVYPEDSNLDQNQISILAPIATASIGYKTGDVIFWNVPDG-VY 119

Query: 118 HLEVLELEYQPEAAGDYLL 136
             ++ E++YQPEA GD+ L
Sbjct: 120 RFQITEIKYQPEANGDFHL 138


>UniRef50_B9MBQ3 GreA/GreB family elongation factor n=6 Tax=Betaproteobacteria
           RepID=B9MBQ3_DIAST
          Length = 135

 Score =  127 bits (319), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 61/134 (45%), Positives = 81/134 (60%), Gaps = 2/134 (1%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
            +P II++ LD ERI+ LLE+         +AL AELDRA +  P++MP +VVTMNS V+
Sbjct: 3   RKPHIILSSLDLERIEALLEKQTAPFPGR-EALEAELDRADVFDPKDMPPNVVTMNSTVR 61

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           F  L  G+    TLVYP +M  S  ++SV APVG ALLGL VGD      P G    + V
Sbjct: 62  FTLLETGKTNTLTLVYPKEMDGSGDKVSVFAPVGIALLGLGVGDEFQMPSPTG-QVTVRV 120

Query: 122 LELEYQPEAAGDYL 135
             +++QPE AG+  
Sbjct: 121 DAIDFQPENAGELH 134


>UniRef50_UPI00016C498C transcription elongation factor greA n=1 Tax=Gemmata obscuriglobus
           UQM 2246 RepID=UPI00016C498C
          Length = 161

 Score =  126 bits (318), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 30/129 (23%), Positives = 52/129 (40%), Gaps = 9/129 (6%)

Query: 5   TIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHDVVTM 56
            I      A  +  L E   Y              DAL+  L RA +     +P D V  
Sbjct: 30  EITKRVAAARDLGDLSENAEYHAAREDQGILQARIDALSDRLSRAVIVDTSNLPKDTVAF 89

Query: 57  NSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVA 116
            S+V+  ++   E     LV P +      ++   +P+G  L+G + GD++  ++P G  
Sbjct: 90  GSKVRVLDVDVDEEETFELVSPGQENPDKGRILTGSPIGQGLIGRKKGDTVEIQVPSGTI 149

Query: 117 THLEVLELE 125
              ++LE+ 
Sbjct: 150 -KFKILEIS 157


>UniRef50_A4XNX9 GreA/GreB family elongation factor n=16 Tax=Bacteria
           RepID=A4XNX9_PSEMY
          Length = 135

 Score =  126 bits (317), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 64/132 (48%), Positives = 81/132 (61%), Gaps = 2/132 (1%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFR 63
           P I I  LD +R++ LL+     G P A AL AELDRA++   +E+P  +VTMNSRV  R
Sbjct: 5   PAITITRLDLQRLERLLDSLDEFG-PGAAALQAELDRAEVVGLDEVPAGLVTMNSRVHCR 63

Query: 64  NLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLE 123
             S G+    TLVYP         +S++APVG+ALLGL VG  I W  PGG    L +L 
Sbjct: 64  EESSGKDYHLTLVYPQDAGGE-GTVSILAPVGSALLGLSVGQHIDWPAPGGKQLKLTLLA 122

Query: 124 LEYQPEAAGDYL 135
           +EYQPEAAG+Y 
Sbjct: 123 VEYQPEAAGEYD 134


>UniRef50_D1B632 Transcription elongation factor n=4 Tax=Synergistaceae
           RepID=D1B632_THEAS
          Length = 164

 Score =  126 bits (316), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 50/131 (38%), Gaps = 9/131 (6%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHDVV 54
           R  I     +A     L E   Y                L  +L +A++    ++    V
Sbjct: 33  RSEIASKLEEARAFGDLSENAEYHAAKEEQEKLESRIMWLEYQLSKAKVVESSDIDTSTV 92

Query: 55  TMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGG 114
           ++ + V+ R+L  G      LV   +      ++S  +PVG A++G   G+ +   +P G
Sbjct: 93  SLGATVQLRDLDTGNTYTYVLVGSEEADPKANRISAQSPVGKAIIGRAEGEEVIVRVPKG 152

Query: 115 VATHLEVLELE 125
              HL +  + 
Sbjct: 153 T-RHLRIERIS 162


>UniRef50_Q03RN4 Transcription elongation factor n=1 Tax=Lactobacillus brevis ATCC
           367 RepID=Q03RN4_LACBA
          Length = 132

 Score =  126 bits (316), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 31/132 (23%), Positives = 56/132 (42%), Gaps = 10/132 (7%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHD 52
           + RP +I     A     L E   Y                +   L  AQ+   ++   D
Sbjct: 2   VQRPKVIDRIKIARSYGDLSENSEYESAKDEQSMLETRISTVERMLQYAQIIDNDDTDKD 61

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            +T+  +V F+   D E    T+V  A+    + ++S  +P+   LLG RVG+++ +  P
Sbjct: 62  EITVGKKVTFQ-EDDDEPEEYTIVGAAEADPMSGKISNDSPIAKGLLGHRVGETVTFPTP 120

Query: 113 GGVATHLEVLEL 124
           GG    ++V+ +
Sbjct: 121 GG-DMTVKVIAV 131


>UniRef50_Q88DU7 Transcription elongation factor greA n=83 Tax=Proteobacteria
           RepID=GREA_PSEPK
          Length = 160

 Score =  126 bits (316), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 47/134 (35%), Gaps = 10/134 (7%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMP-HD 52
            RP +     +A  +  L E   Y                +   L  + +     +P   
Sbjct: 27  ERPRLSQAIGEARELGDLKENAEYHAAREEQGMVEARIRDIEGRLQNSVVIDVTTIPHTG 86

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V   + V   N    E     +V   +      +LS  AP+  A++G   GD++  + P
Sbjct: 87  KVIFGTTVVLANTETDEEVTYQIVGEDEADVKQGKLSSGAPIARAIIGKEEGDTVVVKTP 146

Query: 113 GGVATHLEVLELEY 126
            G     E++E+++
Sbjct: 147 SGTV-EYEIVEVKH 159


>UniRef50_A5FRA2 Transcription elongation factor n=3 Tax=Dehalococcoides
           RepID=A5FRA2_DEHSB
          Length = 266

 Score =  126 bits (316), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 31/135 (22%), Positives = 55/135 (40%), Gaps = 9/135 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHD 52
           + R  +I     A     + E   Y                +  EL  A++    +    
Sbjct: 133 VKRIAVIEEMRLAALDKDMRENAPYHAAKEQRGQIEGRIKEIEHELKHAEVSEYTDNNTS 192

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V M + VK R+L +GE  + TLV P ++     ++S  +P+G AL     GD+I  E+P
Sbjct: 193 KVNMGNTVKLRDLKNGEQCIYTLVSPKEIEPLKGRISASSPIGKALFNRSKGDNIEIEVP 252

Query: 113 GGVATHLEVLELEYQ 127
            G      + ++ ++
Sbjct: 253 SGTLQ-YVIEDISFK 266


>UniRef50_Q9HZY5 Transcription elongation factor greB n=13 Tax=Gammaproteobacteria
           RepID=GREB_PSEAE
          Length = 168

 Score =  125 bits (315), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 27/138 (19%), Positives = 49/138 (35%), Gaps = 10/138 (7%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMPHD 52
           + RP +     +A  +    E   Y                L   L+  ++        +
Sbjct: 33  VRRPQVTQAVSEAAALGDRSENAEYIYGKKMLREIDSRVRFLRKRLENLKVVGERPADPN 92

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V   + V   +   GE     +V P ++   N Q+S+ +P+  AL+G  +   +    P
Sbjct: 93  RVYFGAWVTLEDED-GEQARYRIVGPDELDLRNNQISIDSPLARALVGKELDAEVLVRTP 151

Query: 113 GGVATHLEVLELEYQPEA 130
            G      V+E+EY P  
Sbjct: 152 AGEKLWF-VVEIEYPPAP 168


>UniRef50_UPI0001C3129D transcription elongation factor GreA n=1 Tax=Conexibacter woesei
           DSM 14684 RepID=UPI0001C3129D
          Length = 161

 Score =  125 bits (315), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 51/131 (38%), Gaps = 8/131 (6%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHDV 53
            R  +     +A     + E   Y                L  +L  A +     +  DV
Sbjct: 26  KRREVAARIKEAREFGDISENAEYDDAKNEQAMLESKIAQLEEKLRAATVIDSRSVGTDV 85

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           V + S V+  +   G+     +V  A+   +  +LS  +PVG AL+G + G++   +LP 
Sbjct: 86  VGIGSSVQVADSQSGKSDTYVIVGSAEANPAERKLSNESPVGKALIGRKAGETATVQLPN 145

Query: 114 GVATHLEVLEL 124
           G    L + ++
Sbjct: 146 GKQRELRITKI 156


>UniRef50_Q8ZJH2 Transcription elongation factor greB n=165 Tax=Proteobacteria
           RepID=GREB_YERPE
          Length = 171

 Score =  125 bits (315), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 31/135 (22%), Positives = 54/135 (40%), Gaps = 10/135 (7%)

Query: 2   SRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMPHDV 53
            RP +     +A  +    E   Y                L   L+  ++  P+      
Sbjct: 26  ERPVVTQAVSEAAAMGDRSENAEYIYGKKRLREIDRRVRFLAKRLEVLKIVDPDPRQEGK 85

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           V   + V+  N  + E R+  LV P +   +   +S+ +PV  AL+G +V D +  + P 
Sbjct: 86  VFFGAWVRVENEQE-EQRIFRLVGPDEFDPAKKWISIDSPVARALIGKQVDDEVTVQTPN 144

Query: 114 GVATHLEVLELEYQP 128
           G A    +LE+ Y+P
Sbjct: 145 GEA-TYWILEIRYRP 158


>UniRef50_A0LK20 Transcription elongation factor greA n=1 Tax=Syntrophobacter
           fumaroxidans MPOB RepID=GREA_SYNFM
          Length = 156

 Score =  125 bits (314), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 31/132 (23%), Positives = 53/132 (40%), Gaps = 9/132 (6%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHDV 53
            RP +I    +A     + E   Y                L  ++   ++  P +  +  
Sbjct: 25  ERPMVIRAIEEARSHGDISENAEYEAAKEKQAMIEGRIQDLCQKMGECEIVEPSDNDNGR 84

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
               S V   +   GEV    LV P +    +  +SV++P+G AL+G   G+ I  + P 
Sbjct: 85  AIFGSTVVVEDTETGEVTSYRLVGPYEADVQSGTISVVSPLGKALIGKEEGEEIRVQTPK 144

Query: 114 GVATHLEVLELE 125
           G   ++EVLE+ 
Sbjct: 145 G-VRNIEVLEIR 155


>UniRef50_Q096W9 Transcription elongation factor GreB n=1 Tax=Stigmatella aurantiaca
           DW4/3-1 RepID=Q096W9_STIAU
          Length = 144

 Score =  125 bits (314), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 30/135 (22%), Positives = 47/135 (34%), Gaps = 11/135 (8%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEE-MPH 51
           + RP +      A       E   Y                L   LD A + +P E    
Sbjct: 11  VERPKVTAEVSAAAAQGDRSENAEYIYGKKRLREIDRRIRFLQKRLDTATIVTPAEQTDQ 70

Query: 52  DVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWEL 111
             V   + V   +   G      +V   ++     ++SV +P+G ALL   VGDS+    
Sbjct: 71  GRVYFGATVTLEDED-GVQTTYQIVGSDEIDTQGGRISVESPIGKALLRKAVGDSVEVMR 129

Query: 112 PGGVATHLEVLELEY 126
           P G    L ++ + Y
Sbjct: 130 PRGEI-ELTIVAIAY 143


>UniRef50_Q67JL1 Transcription elongation factor n=2 Tax=Clostridiales
           RepID=Q67JL1_SYMTH
          Length = 157

 Score =  125 bits (314), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 52/133 (39%), Gaps = 9/133 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHD 52
           + R  +      A     + E   Y                L   L  A++        +
Sbjct: 26  VKRMEVAERIKQAREYGDISENSEYEDAKNEQAFIEGRILVLEKMLRNARVIDEPVGQQE 85

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
           VV + S V  R+L  G+    T+V   +   ++ ++S  +PVG A++G RVG  +  + P
Sbjct: 86  VVVLGSTVVLRDLEYGDEHTYTIVGTTEADPAHNRISNESPVGRAIMGQRVGTVVAVDAP 145

Query: 113 GGVATHLEVLELE 125
            G     E++ ++
Sbjct: 146 DG-VFKYEIVAIK 157


>UniRef50_Q3K4S3 Regulator of nucleoside diphosphate kinase n=2 Tax=Pseudomonas
           fluorescens RepID=Q3K4S3_PSEPF
          Length = 136

 Score =  125 bits (314), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 57/135 (42%), Positives = 79/135 (58%), Gaps = 2/135 (1%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRA-QMCSPEEMPHDVVTMNSR 59
           M+ P+I +  LD +R++ L++        +   L  ELDRA  +   +E+P DVVTMNSR
Sbjct: 1   MTAPSITLTRLDVQRLERLIDSLDDTLPGVIA-LQTELDRADTLVGHDEVPADVVTMNSR 59

Query: 60  VKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHL 119
           V  R  S G+    TLVYP        ++S++APVG+ALLGL+VG  I W  PGG    L
Sbjct: 60  VHCREESSGKDYHLTLVYPKHANADEGKVSILAPVGSALLGLKVGQHIDWPAPGGKTLKL 119

Query: 120 EVLELEYQPEAAGDY 134
            +LE+E QP   GD+
Sbjct: 120 TLLEVESQPSNGGDF 134


>UniRef50_C9KJ19 Transcription elongation factor n=1 Tax=Mitsuokella multacida DSM
           20544 RepID=C9KJ19_9FIRM
          Length = 156

 Score =  124 bits (313), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 30/133 (22%), Positives = 51/133 (38%), Gaps = 11/133 (8%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHD 52
           + R  I      A  +  L E   Y                L A++  + +        D
Sbjct: 26  VKRIEIAQRLKAAIALGDLSENSEYDDAKNEQAFLEGEIQDLTAKIRNSHIIKAGA--GD 83

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
           VV M S+V  +++  G+     LV   +      ++S  +P+G ALLG + G  I    P
Sbjct: 84  VVQMGSKVTVKDIEFGDEETFMLVGSTEADPDEGKISNESPLGQALLGQKSGSVIDVHAP 143

Query: 113 GGVATHLEVLELE 125
            G     E+L+++
Sbjct: 144 AG-IIKYEILDIK 155


>UniRef50_B5JTX6 Transcription elongation factor n=1 Tax=gamma proteobacterium
           HTCC5015 RepID=B5JTX6_9GAMM
          Length = 138

 Score =  124 bits (313), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 53/133 (39%), Positives = 79/133 (59%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFR 63
           P I + +LD  RI+ LLE+           L  EL R ++ S +E+  DVVTMNSRVK+ 
Sbjct: 6   PPITLPELDVARIESLLEKLDLKAKNNHTELFEELYRCRIVSSQEVSPDVVTMNSRVKYT 65

Query: 64  NLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLE 123
            L   +    TL YP +++ ++  +S++AP+G+A++GL VG  I W LP G    L + E
Sbjct: 66  RLDTQQQSTLTLCYPDQISRADDAVSILAPIGSAIIGLSVGQIIDWPLPNGKNAPLRIDE 125

Query: 124 LEYQPEAAGDYLL 136
           L +QPE +G+Y L
Sbjct: 126 LLFQPERSGNYTL 138


>UniRef50_Q2GD99 Transcription elongation factor greA n=2 Tax=Neorickettsia
           RepID=GREA_NEOSM
          Length = 159

 Score =  124 bits (313), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 53/134 (39%), Gaps = 9/134 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHD 52
           + +P+++     A  +  L E   Y                L   L  A++    +   +
Sbjct: 24  VVKPSVVAAVAQARELGDLSENAEYHEARKEQSFVEGKIRELQLCLSEAEVIDVSQFTGE 83

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V   + V   N+    V +  +V   +      ++SV +P+G A++   VG+ +  +LP
Sbjct: 84  RVKFGASVTLENMESKSVLIYQIVGNLESDIKEGKISVSSPIGKAVMNKEVGEIVEIDLP 143

Query: 113 GGVATHLEVLELEY 126
            G     ++L +E+
Sbjct: 144 SGK-KTYKILGVEF 156


>UniRef50_B8G0E1 GreA/GreB family elongation factor n=2 Tax=Desulfitobacterium
           hafniense RepID=B8G0E1_DESHD
          Length = 138

 Score =  124 bits (312), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 57/140 (40%), Positives = 79/140 (56%), Gaps = 6/140 (4%)

Query: 1   MSRPTIIINDLDAERIDIL----LEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTM 56
           MSR  I I  +D ER+  L     E  +         L  EL+ A +   E++P + +TM
Sbjct: 1   MSR-KISITAVDRERLLKLINKEREFGSAKNKDYLKDLEHELNGADVVPSEKIPGNAITM 59

Query: 57  NSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVA 116
           NSR+  ++L  GE  V TLVYP        ++S++APVG A+LG   GD I W++PGGV 
Sbjct: 60  NSRILLKDLETGEETVYTLVYPEDADLLEDKISILAPVGTAILGYLEGDIIDWKVPGGVV 119

Query: 117 THLEVLELEYQPEAAGDYLL 136
              +V ++ YQPEAAGDY L
Sbjct: 120 R-FKVEKILYQPEAAGDYHL 138


>UniRef50_C4Z9L9 Transcription elongation factor n=3 Tax=Firmicutes
           RepID=C4Z9L9_EUBR3
          Length = 185

 Score =  124 bits (312), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 29/137 (21%), Positives = 55/137 (40%), Gaps = 9/137 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHD 52
           + R  +     +A     L E   Y              + +   L  A++   EE+  D
Sbjct: 49  VKRKEVSQKIKEAREQGDLSENAEYDAAKDEQRDIEARIEEIEKILKNAEVVVEEEVDLD 108

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            +++  +++  +    E     +V   +      ++S  +PVG ALLG +VGD++  E  
Sbjct: 109 KISIGCKIRILDCEFDEELEYKIVGSTEANSLKGKISNESPVGKALLGKKVGDTVTVETQ 168

Query: 113 GGVATHLEVLELEYQPE 129
            G     +VLE++   E
Sbjct: 169 VGE-LTYKVLEIQRAEE 184


>UniRef50_Q2Y7V5 GreA/GreB family elongation factor n=33 Tax=cellular organisms
           RepID=Q2Y7V5_NITMU
          Length = 213

 Score =  124 bits (311), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 32/143 (22%), Positives = 53/143 (37%), Gaps = 12/143 (8%)

Query: 2   SRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMPHD- 52
            RP +      A       E   Y                L   LD A++  P     D 
Sbjct: 53  ERPQVTATVSWAAANGDRSENADYIYGKKRLREIDRRIRFLTRRLDMAEIIDPSMPREDE 112

Query: 53  -VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWEL 111
             +   + V + N   GE ++ ++V   ++  +   +S ++P+   LL  R GD +    
Sbjct: 113 SRIFFGATVTYINEK-GEEKIVSIVGVNEIDTTRGYISWVSPLARTLLKAREGDVVTLHA 171

Query: 112 PGGVATHLEVLELEYQPEAAGDY 134
           PGG    LE+LE+ YQ      +
Sbjct: 172 PGGTE-ELEILEVRYQAIPMEPF 193


>UniRef50_D0J9T5 Transcription elongation factor n=55 Tax=Bacteria
           RepID=D0J9T5_BLASP
          Length = 162

 Score =  124 bits (311), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 33/134 (24%), Positives = 61/134 (45%), Gaps = 8/134 (5%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADA--------LNAELDRAQMCSPEEMPHD 52
           + RP I +   +A     L E   Y  +  A          L  +L  A++    ++   
Sbjct: 27  IERPKISMQIAEARDKGDLSENAEYDAIKEAQEFLEMNIAKLKKKLSNARIIDGSQINRT 86

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V++ S V+ +NL+ G  ++ TLV   +    + ++S+  P+   LLG +VG   H +LP
Sbjct: 87  RVSILSTVRVKNLTYGGEQIYTLVPEGEADLKSGKISINTPISTGLLGKQVGQIAHIKLP 146

Query: 113 GGVATHLEVLELEY 126
             +    E+LE+ +
Sbjct: 147 NKMILDYEILEIAF 160


>UniRef50_A9GAI2 Regulator of nucleoside diphosphate kinase n=1 Tax=Sorangium
           cellulosum 'So ce 56' RepID=A9GAI2_SORC5
          Length = 140

 Score =  124 bits (311), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 48/135 (35%), Positives = 74/135 (54%), Gaps = 4/135 (2%)

Query: 5   TIIINDLDAERIDILLEQPAYA---GLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
            I++ + D +R+  LLE          P  +AL  E++RA +  P ++P +VVTMNSRV+
Sbjct: 7   PIVLTEFDRDRLARLLEALRARPGGDSPNLEALEIEIERADVVKPADIPPNVVTMNSRVE 66

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
             +L   E    T+V+P      + ++SV+AP+G ALLG R  D + W  P      L +
Sbjct: 67  LVDLDTEERLCVTVVFPGNADVKSGRISVLAPMGLALLGCREADEVEWPTPS-RTRRLRI 125

Query: 122 LELEYQPEAAGDYLL 136
             + YQPEA+G + L
Sbjct: 126 ERIAYQPEASGRFDL 140


>UniRef50_Q4KB20 Acetyltransferase, GNAT family family n=9 Tax=Bacteria
           RepID=Q4KB20_PSEF5
          Length = 379

 Score =  124 bits (311), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 44/132 (33%), Positives = 71/132 (53%), Gaps = 6/132 (4%)

Query: 5   TIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRN 64
            I I ++D  R++ L+    +   P    L  EL+RA +  P+++  +V+TMNSR   + 
Sbjct: 254 EIYITEIDKARLESLI---VFEQGPTIVELEHELERAIVVKPQQVARNVITMNSRALLQL 310

Query: 65  LSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
               E     LVYP     +  + SV + +GAA+LG + GD+I W +       +E+ ++
Sbjct: 311 DD--EEIEVALVYPEDADSTAGKHSVYSDIGAAILGYQEGDTIDWRISD-RTRRIEIRKV 367

Query: 125 EYQPEAAGDYLL 136
            YQPEAAGD+ L
Sbjct: 368 LYQPEAAGDFHL 379


>UniRef50_Q13WN5 GreA/GreB family elongation factor n=50 Tax=Burkholderia
           RepID=Q13WN5_BURXL
          Length = 136

 Score =  123 bits (310), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 43/136 (31%), Positives = 70/136 (51%), Gaps = 3/136 (2%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADA-LNAELDRAQMCSPEEMPHDVVTMNSRV 60
              T  + +LD  R++      A          L+  L+RA +    E+P +VVTMNS+ 
Sbjct: 3   KTKTCYLTELDVARLEKHA--AAPGADARLQDMLDDVLERAVIVDSHEIPANVVTMNSQA 60

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
              + + GE    T+VYP     ++ +L+V +P G ALLG + G+ I +  P G    L+
Sbjct: 61  TLVDETSGEHMTWTVVYPPNADFAHGRLNVFSPAGLALLGAKRGERIRFTPPSGTEKVLK 120

Query: 121 VLELEYQPEAAGDYLL 136
           + ++ +QPEAA D+ L
Sbjct: 121 LEKILFQPEAADDFTL 136


>UniRef50_A9MBQ4 GreA/GreB family elongation factor n=36 Tax=Brucella
           RepID=A9MBQ4_BRUC2
          Length = 169

 Score =  122 bits (308), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 46/123 (37%), Positives = 73/123 (59%), Gaps = 1/123 (0%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
            +P I+++++D ER+  L    +     IA+ L AELDRA++ + + +P +VV M S V+
Sbjct: 7   KKPNIVVSEVDYERLMGLASNASERFEEIAEELMAELDRAKVVTAKRIPENVVQMGSTVE 66

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           FR  +DG  R  TLVYP +   +  ++S++ P+G AL+GL  G SI W    G    L V
Sbjct: 67  FR-ANDGHERRVTLVYPGEADIAKNRISILTPIGTALIGLAPGQSISWTARDGKQHELNV 125

Query: 122 LEL 124
           L++
Sbjct: 126 LKV 128


>UniRef50_D0J5N8 Kelongation factor GreB n=4 Tax=Proteobacteria RepID=D0J5N8_COMTE
          Length = 231

 Score =  122 bits (308), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 34/135 (25%), Positives = 52/135 (38%), Gaps = 11/135 (8%)

Query: 2   SRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPE-EMPHD 52
            RP I+     A       E   Y                L   L+ A++  P      D
Sbjct: 93  ERPKIVEIVHWAASNGDRSENGDYLYGKKRLREIDRRIRFLTKRLEIAEVVDPAVHAGSD 152

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V   + V + +  +G  R  T++   +   +  Q+S +APV  ALL  RVGD +    P
Sbjct: 153 QVFFGATVSYVD-DEGVERTITIMGIDEADSAQNQVSWIAPVSRALLKARVGDEVALPTP 211

Query: 113 GGVATHLEVLELEYQ 127
            G    LE+L++ Y 
Sbjct: 212 AG-VRMLEILDVSYP 225


>UniRef50_Q2Z001 Transcription elongation factor n=1 Tax=uncultured candidate
           division OP8 bacterium RepID=Q2Z001_9BACT
          Length = 156

 Score =  122 bits (308), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 27/134 (20%), Positives = 51/134 (38%), Gaps = 9/134 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHD 52
           + RP  +    +A     L E   +                L   +  A +  P ++  +
Sbjct: 24  VDRPANVKAIEEARGHGDLRENADFKCAKDEQAMIVGRIAYLQGRISHAAVIDPSKLSGN 83

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V   +RV  +NL  GE  V  LV   +       +S+ +P+   L+   VG+     +P
Sbjct: 84  RVVFGARVFLKNLDTGEPIVYRLVGEDEADIEQGSISITSPLARGLIRREVGEQAKIAVP 143

Query: 113 GGVATHLEVLELEY 126
            G     E++++E+
Sbjct: 144 SG-IKSFEIVKIEF 156


>UniRef50_A6X582 GreA/GreB family elongation factor n=3 Tax=Rhizobiales
           RepID=A6X582_OCHA4
          Length = 142

 Score =  122 bits (308), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 44/131 (33%), Positives = 75/131 (57%), Gaps = 1/131 (0%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
            +P I+++++D ER+  L    +     IA+ L  ELDRA++   + +P +V+ M S V+
Sbjct: 7   KKPNIVVSEIDYERLMGLATNVSERLEEIAEELMVELDRAKVVPAKRLPQNVIHMGSTVE 66

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           FR+ +DG+ R  TLVYP +   +  ++S++ P+G AL+GL  G SI W    G    L V
Sbjct: 67  FRS-NDGQERRVTLVYPGEADIAQGKISILTPIGTALIGLAPGQSISWTARDGKQHELNV 125

Query: 122 LELEYQPEAAG 132
           L +  + + + 
Sbjct: 126 LSVSNEAQVSA 136


>UniRef50_C9P6Y2 Regulator of nucleoside diphosphate kinase n=1 Tax=Vibrio
           metschnikovii CIP 69.14 RepID=C9P6Y2_VIBME
          Length = 136

 Score =  122 bits (308), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 54/131 (41%), Positives = 81/131 (61%), Gaps = 2/131 (1%)

Query: 5   TIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRN 64
            II++ LD +RI  L+++         + L  ELDRA + +PEE+P DVVTMNS VKF+ 
Sbjct: 7   AIIVSTLDMDRISALMDKLP-KLSKELERLENELDRATVLNPEEIPADVVTMNSTVKFKF 65

Query: 65  LSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
               +V  +TLVYP  +  ++  +S+ APVG+ALLGL  G  + W +P GV   +E++++
Sbjct: 66  QGSDDVMQKTLVYPHDVKGNDD-ISIFAPVGSALLGLSKGQQLTWPMPNGVERTIEIIDI 124

Query: 125 EYQPEAAGDYL 135
             QPE  G+Y 
Sbjct: 125 IDQPERNGEYN 135


>UniRef50_Q1AU03 Transcription elongation factor n=1 Tax=Rubrobacter xylanophilus
           DSM 9941 RepID=Q1AU03_RUBXD
          Length = 154

 Score =  122 bits (306), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 31/134 (23%), Positives = 50/134 (37%), Gaps = 10/134 (7%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGL--------PIADALNAELDRAQMCSP-EEMPH 51
           + R  +      A     + E   Y                L   L  A++  P      
Sbjct: 19  VRRKEVAERIRQAREFGDISENSEYDDAKNEQGLLERRISELQRRLRNAKIVDPASSAEE 78

Query: 52  DVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWEL 111
             V + +RV  R + DG  R   +V   +   ++ +LS  +PVG ALL  RVG+ +    
Sbjct: 79  GAVDLGTRVTLRVVGDGRERTFQIVGANEADPASGKLSHASPVGKALLRRRVGEKVRVST 138

Query: 112 PGGVATHLEVLELE 125
           P G     E++ +E
Sbjct: 139 PRGAT-EYEIVSVE 151


>UniRef50_Q3ATA7 Transcription elongation factor greA n=13 Tax=Bacteria
           RepID=GREA_CHLCH
          Length = 160

 Score =  121 bits (305), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 10/136 (7%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHDV 53
           +R  ++    +A     L E   Y                L ++L  A +  P+++  D 
Sbjct: 26  TRKEVLEKIAEARAHGDLSENAEYDAAREEQSQIEARIGDLESKLSAATILDPKQIKTDK 85

Query: 54  VTMNSRVKFRNLSD-GEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
           V + + VK RNL +  E+   TLV   +      ++SV +PVG +L+G  VG  +   +P
Sbjct: 86  VYILTSVKLRNLDNPDEIIEYTLVSSEEADTDAGKISVRSPVGRSLIGKTVGAKVTIVVP 145

Query: 113 GGVATHLEVLELEYQP 128
            G   H E+LE+  +P
Sbjct: 146 KGE-LHYEILEIFVKP 160


>UniRef50_A7HDS3 Transcription elongation factor GreB n=3 Tax=Myxococcales
           RepID=A7HDS3_ANADF
          Length = 169

 Score =  121 bits (305), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 34/137 (24%), Positives = 55/137 (40%), Gaps = 10/137 (7%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMPHD 52
           + RP I+     A  +    E   Y                L+  +D   +  P   PH 
Sbjct: 32  VDRPKIVAEVEAAAALGDRSENAEYVYGKKKLRELDRRLRFLSERMDALTVVDPRPHPHG 91

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
                + V   +  +GE R   LV P +   +   +SV AP+G ALLG + GD++ +  P
Sbjct: 92  RAFFGAWVTIED-DEGEARTFRLVGPDEFDVAAGLISVEAPLGRALLGKQEGDTVLFLRP 150

Query: 113 GGVATHLEVLELEYQPE 129
            G A  L ++ + + P 
Sbjct: 151 AGEA-ELTIMAVRWSPP 166


>UniRef50_Q0BR49 Transcription elongation factor greB n=4 Tax=cellular organisms
           RepID=Q0BR49_GRABC
          Length = 169

 Score =  121 bits (305), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 33/138 (23%), Positives = 55/138 (39%), Gaps = 11/138 (7%)

Query: 2   SRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMP-HD 52
            RP I+     A       E   Y                L   L+ A +  P   P  D
Sbjct: 34  ERPKIVEIVSWAAGNGDRSENGDYLYGKKRLREIDRRVRFLTKRLENAVVIDPATQPHKD 93

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            +   + V + N +D E    T+V   +   +  ++S+++PV  ALLG   GD +    P
Sbjct: 94  RIYFGATVTYINAAD-ETVQVTIVGADEADMALGRISLLSPVAKALLGASKGDEVTVITP 152

Query: 113 GGVATHLEVLELEYQPEA 130
                 L++L+++Y+P A
Sbjct: 153 V-KTEILDILDVDYRPLA 169


>UniRef50_C6X5Q8 Transcription elongation factor n=1 Tax=Flavobacteriaceae bacterium
           3519-10 RepID=C6X5Q8_FLAB3
          Length = 170

 Score =  121 bits (305), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 48/137 (35%), Positives = 72/137 (52%), Gaps = 6/137 (4%)

Query: 4   PTIIINDLDAERI----DILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSR 59
             III   D+ RI        +  +      A+ L  EL  A++    ++P DVVTMNS 
Sbjct: 36  KQIIITKQDSTRIHKSIMDAKKNNSIK-AEDAERLLRELHSAKIVESADIPADVVTMNSV 94

Query: 60  VKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHL 119
           VK    ++  V    +VYP +    + ++S+ +PV AAL+G  V D I W +P G+   +
Sbjct: 95  VKIHFENNKTVTEFKIVYPEQANIKDRKISIFSPVAAALIGYSVNDEIDWIVPSGMT-KI 153

Query: 120 EVLELEYQPEAAGDYLL 136
            + E+ YQPEAAGD+ L
Sbjct: 154 IIDEIIYQPEAAGDFDL 170


>UniRef50_D2T9B8 Transcription elongation factor greB n=3 Tax=Erwinia
           RepID=D2T9B8_ERWPY
          Length = 187

 Score =  121 bits (304), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 48/133 (36%), Gaps = 10/133 (7%)

Query: 2   SRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMPHDV 53
            RP +      A  +    E   Y                L   L++ ++          
Sbjct: 53  ERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYLTKCLEQLRIVDYSPQQDGK 112

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           V   + V+  N  DG+++   +V   ++   N  +S+ +P+  ALL   VGD+     P 
Sbjct: 113 VFFGAWVEVEN-DDGDIKRFRIVGYDEIFGRNDYISIDSPMARALLKKEVGDAATVFTPA 171

Query: 114 GVATHLEVLELEY 126
           G A    + ++ Y
Sbjct: 172 GEALWY-INDISY 183


>UniRef50_Q98Q16 Transcription elongation factor greA n=3 Tax=Mycoplasma
           RepID=GREA_MYCPU
          Length = 157

 Score =  121 bits (303), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 48/132 (36%), Gaps = 12/132 (9%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHD 52
           + RP +I+   +A +   L E   Y                L   L  A          D
Sbjct: 27  VERPAVILEIKEARQQGDLSENAEYDAAREKQGQIEDRITELENILSNAISIQESH--SD 84

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            + + S V+  N S G+ R   +V       +  ++S  +P+  +++G   GD +  + P
Sbjct: 85  KIGLGSVVRILNQSTGKERTFKIVGSFDTDPTQNKISYESPLAKSIIGFSKGDVVEIDAP 144

Query: 113 GGVATHLEVLEL 124
                  ++L +
Sbjct: 145 D--KYTTKILSV 154


>UniRef50_Q04HS9 Transcription elongation factor greA n=90 Tax=Bacilli
           RepID=GREA_STRP2
          Length = 160

 Score =  121 bits (303), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 56/133 (42%), Gaps = 9/133 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHD 52
           + RP ++     A     L E   Y               +L  ++  A++ + + +  D
Sbjct: 26  VRRPEVVERIKIARSYGDLSENSEYEAAKDEQAFVEGQISSLETKIRYAEIVNSDAVAQD 85

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V +   V  + + + E  V  +V  A       ++S  +P+G AL+G + GD+   E P
Sbjct: 86  EVAIGKTVTIQEIGEDEEEVYIIVGSAGADAFAGKVSNESPIGQALIGKKTGDTATIETP 145

Query: 113 GGVATHLEVLELE 125
            G    +++L++E
Sbjct: 146 VGS-YDVKILKVE 157


>UniRef50_Q30T56 Transcription elongation factor n=3 Tax=Campylobacterales
           RepID=Q30T56_SULDN
          Length = 174

 Score =  121 bits (303), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 31/135 (22%), Positives = 54/135 (40%), Gaps = 9/135 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMPHD 52
           + +P      L A  +    E   Y                LNA + +A +  P  + H 
Sbjct: 23  VEKPKTAQEKLVAAALGDRSENADYQAAKEKLRHIDKRLFYLNAMIQKAHIIDPSTLLHT 82

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V+  S V+  +L   +  V T+    +    N  +S+ +P+   +LG RV D    +LP
Sbjct: 83  KVSFGSSVRILDLESDKEEVYTICGVLESEPENGLISIHSPLAQVMLGKRVSDEFKIQLP 142

Query: 113 GGVATHLEVLELEYQ 127
             +    E+LE+ Y+
Sbjct: 143 L-MKKEYEILEIYYK 156


>UniRef50_C3X2V3 GreA/GreB family elongation factor n=2 Tax=Oxalobacter formigenes
           RepID=C3X2V3_OXAFO
          Length = 140

 Score =  121 bits (303), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 51/126 (40%), Positives = 73/126 (57%), Gaps = 1/126 (0%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
            RP I +   D ER++ +L    Y  +P    L  ELDRA +  PEE+P DV+T+NS  +
Sbjct: 13  ERPPITVTTHDYERLEQMLRNAKYRNIPGMADLQRELDRANVVEPEELPEDVITINSTAR 72

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           F +    +    TLVYP K    + ++SV+APVG+ALLGL  G SI W++PG     L V
Sbjct: 73  FIDDCTNDQYEITLVYPDKADGVS-KISVLAPVGSALLGLSAGQSIPWQVPGRQKLQLRV 131

Query: 122 LELEYQ 127
           L+++  
Sbjct: 132 LDVKAP 137


>UniRef50_A6W1U9 Transcription elongation factor GreB n=17 Tax=Gammaproteobacteria
           RepID=A6W1U9_MARMS
          Length = 196

 Score =  120 bits (302), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 46/133 (34%), Gaps = 10/133 (7%)

Query: 2   SRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMPHDV 53
            RP +     +A       E   Y                L   L+   +        + 
Sbjct: 61  KRPAVTETVREAAAQGDRSENAEYIYGKKQLREIDRRVRYLEKRLEVCTVVDRFPSDQER 120

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           V   + V   +   G ++   +V P ++   ++ +S+ +PV  ALL  + GD +   L G
Sbjct: 121 VFFGAWVTLEDE-AGNLKEYRIVGPDELDHHSSYISIDSPVARALLKKQEGDEVVIRLAG 179

Query: 114 GVATHLEVLELEY 126
           G      +  +EY
Sbjct: 180 GE-KTYIIDAVEY 191


>UniRef50_A5VGM9 GreA/GreB family elongation factor n=1 Tax=Sphingomonas wittichii
           RW1 RepID=A5VGM9_SPHWW
          Length = 137

 Score =  119 bits (300), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 42/130 (32%), Positives = 67/130 (51%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
            RP I + D +A+ +  L    A     ++  L  EL RA +   + +P D+VTM+S V+
Sbjct: 8   RRPPIHMIDSEADILADLATSAATRLPQVSQLLLEELGRATIHKADRIPGDIVTMHSVVQ 67

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           F + + G+     LVYP     +  ++S++ PVGA L+GLR G SI W    G    L +
Sbjct: 68  FTDAASGKEHRYQLVYPKDADIAEGRISILTPVGAGLIGLRAGQSILWPDRDGHERLLTI 127

Query: 122 LELEYQPEAA 131
            ++  +  AA
Sbjct: 128 AKVSRESLAA 137


>UniRef50_Q3SMM4 GreA/GreB family elongation factor n=1 Tax=Thiobacillus
           denitrificans ATCC 25259 RepID=Q3SMM4_THIDA
          Length = 138

 Score =  119 bits (300), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 61/134 (45%), Positives = 80/134 (59%), Gaps = 1/134 (0%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
           +RP I +++ D ER++ +L        P A+AL  ELDRA++  PE MP DVVTMNSR++
Sbjct: 5   TRPAITVSERDLERLEDMLAGLPDDL-PGAEALRDELDRAEILRPEAMPADVVTMNSRIR 63

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           F     G+    TLVYP   T S  QL V  P G A+LGL VG  I W+ P G      +
Sbjct: 64  FVVEPAGKEMEMTLVYPRDFTGSPDQLPVTTPAGIAVLGLAVGQEIEWQAPNGQKVGARI 123

Query: 122 LELEYQPEAAGDYL 135
           ++L YQPE AGDY+
Sbjct: 124 VDLAYQPERAGDYM 137


>UniRef50_Q1QUF3 GreA/GreB family elongation factor n=1 Tax=Chromohalobacter
           salexigens DSM 3043 RepID=Q1QUF3_CHRSD
          Length = 178

 Score =  119 bits (300), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 29/138 (21%), Positives = 48/138 (34%), Gaps = 10/138 (7%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMPHD 52
           + RP +     +A  +    E   Y          +     L   LD  Q+         
Sbjct: 43  VKRPALSTKVGEAAALGDRSENADYTYNKKELNRVIARIRYLGKRLDELQVVDRLPADTS 102

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V   + V   +  DGE     +V   +       +SV AP+  A+LG  + + +    P
Sbjct: 103 RVYFGAYVTLED-DDGEEMTIRIVGHDETDTDKRWISVDAPLAQAMLGKGLDEDVTVNAP 161

Query: 113 GGVATHLEVLELEYQPEA 130
           GG      + ++ Y PEA
Sbjct: 162 GGDT-TYIITDIAYDPEA 178


>UniRef50_Q88KH5 Transcription elongation factor greB n=84 Tax=Gammaproteobacteria
           RepID=GREB_PSEPK
          Length = 162

 Score =  119 bits (298), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 46/134 (34%), Gaps = 10/134 (7%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMPHD 52
           + RP I      A  +    E   Y                L   L+  ++ +       
Sbjct: 24  VYRPEITQKVAWAASLGDRSENADYQYNKKLLREIDRRVRYLRKRLEDVKVVAYSPEQEG 83

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V   + V+  N  +GE     +V   ++   N  +S+ +P+  ALL    GD +    P
Sbjct: 84  KVFFGAWVEIEN-DEGETMKFRIVGYDEIYGRNDYISIDSPMARALLKKEEGDEVVVHTP 142

Query: 113 GGVATHLEVLELEY 126
            G AT   V  + Y
Sbjct: 143 TGEATWY-VSSIRY 155


>UniRef50_A2RGA4 Transcription elongation factor greA n=111 Tax=Firmicutes
           RepID=GREA_STRPG
          Length = 160

 Score =  118 bits (297), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 50/133 (37%), Gaps = 9/133 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHD 52
           + RP I+     A     L E   Y                L  ++  A++   + +  D
Sbjct: 26  VRRPEIVERIKIARSYGDLSENSEYDAAKDEQAFVEGQISTLETKIRYAEIIDSDAVAKD 85

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V +   V  + +   +     +V  A     + ++S  +P+  AL+G + GD +  E P
Sbjct: 86  EVAIGKTVIVQEVGTTDKDTYHIVGAAGADIFSGKISNESPIAQALIGKKTGDKVRIESP 145

Query: 113 GGVATHLEVLELE 125
                 +E++ +E
Sbjct: 146 A-ATYDVEIISVE 157


>UniRef50_D1SYS0 GreA/GreB family elongation factor n=1 Tax=Acidovorax avenae subsp.
           avenae ATCC 19860 RepID=D1SYS0_9BURK
          Length = 139

 Score =  118 bits (296), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 50/135 (37%), Positives = 68/135 (50%), Gaps = 9/135 (6%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFR 63
           P  ++ DLD  R+  L  +           L   L  A +     +  DVVTMNSRV+  
Sbjct: 8   PERVLTDLDFARLSKLAARQLPPAS-----LADLLATADVTGSRAVDADVVTMNSRVELE 62

Query: 64  ----NLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHL 119
               + +DG  +V TL YP     +  ++SV++PVG +LLGLRVGD   W  P G     
Sbjct: 63  GSGTDGADGARQVLTLCYPQDADAAAGRVSVLSPVGCSLLGLRVGDVAAWRTPQGEDCRA 122

Query: 120 EVLELEYQPEAAGDY 134
            V  + +QPEAAGDY
Sbjct: 123 TVAAILHQPEAAGDY 137


>UniRef50_A6GQE5 Nucleoside diphosphate kinase regulator n=1 Tax=Limnobacter sp.
           MED105 RepID=A6GQE5_9BURK
          Length = 122

 Score =  118 bits (296), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 48/128 (37%), Positives = 64/128 (50%), Gaps = 7/128 (5%)

Query: 8   INDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSD 67
           +N+LD  RI  L         P    LNA LD A+   P+++P DVVTMNS         
Sbjct: 1   MNELDLARISKL-------NAPFPPELNAALDNAEFIKPQDIPADVVTMNSLFTIVETES 53

Query: 68  GEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQ 127
           G      L YP+    +   +SV++PVGA+LLG + G    W  P G      V E+ +Q
Sbjct: 54  GSTNKLMLCYPSDAEPAKGYISVLSPVGASLLGRKAGTVAQWATPNGEQHFAVVKEILFQ 113

Query: 128 PEAAGDYL 135
           PEA+GDY 
Sbjct: 114 PEASGDYT 121


>UniRef50_O51157 Transcription elongation factor greA n=23 Tax=Borrelia
           RepID=GREA_BORBU
          Length = 901

 Score =  118 bits (296), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 50/134 (37%), Gaps = 9/134 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHD 52
           +  P        A  +  L E   Y              ++L  E++ A++   +++   
Sbjct: 765 VEIPENSKEIGKARELGDLKENAEYHSAKEKQQFLTKRLNSLMLEIENAKVIDTKDLQSS 824

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
           VV   ++V   N   G+     ++ P +       +S  +P G  LL  R GDS+++ + 
Sbjct: 825 VVGFGTKVVILNEVTGKDESYLILGPWESNPDEGIISYKSPFGENLLDSREGDSLNFVI- 883

Query: 113 GGVATHLEVLELEY 126
                   V ++E 
Sbjct: 884 NNTNFKYFVKKIEP 897


>UniRef50_C1XQ58 Transcription elongation factor n=2 Tax=Meiothermus
           RepID=C1XQ58_9DEIN
          Length = 159

 Score =  118 bits (296), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 47/135 (34%), Gaps = 10/135 (7%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHD 52
           + R  I      A     L E   Y                L + L RA +         
Sbjct: 27  VKRQEIAAAFEQAIEEGDLRENAGYDEARRAQWDNDRRISELESILARAVVVEAGNGTPL 86

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V +   V+      G     T+V   +    N ++S  +P+G  L+G +VGD + +  P
Sbjct: 87  EVGLGVSVELE-TDTGARMSLTIVGSHEADVFNGKISNESPMGQRLMGKKVGDRVEYPSP 145

Query: 113 GGVATHLEVLELEYQ 127
            G      ++EL Y+
Sbjct: 146 KG-VQSYTIVELSYK 159


>UniRef50_A5F052 Regulator of nucleoside diphosphate kinase n=31 Tax=Vibrio
           RepID=A5F052_VIBC3
          Length = 135

 Score =  118 bits (296), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 59/130 (45%), Positives = 82/130 (63%), Gaps = 2/130 (1%)

Query: 6   IIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNL 65
           I+++  D +RI  L++  A    P  + L  ELDRA +  P EMP DVVTMNS V+F+ L
Sbjct: 7   IVVSTRDMDRISQLMDNLAT-LSPELEKLEEELDRATVLEPAEMPEDVVTMNSTVRFKFL 65

Query: 66  SDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
              EV  +TLVYP  +  S   +S+ APVG+ALLGL VG  + W +PGG    LE++++ 
Sbjct: 66  GSDEVMEKTLVYPNDVKSSAD-VSIFAPVGSALLGLAVGQQLAWPMPGGTLKTLEIIDIV 124

Query: 126 YQPEAAGDYL 135
           YQPE AG++ 
Sbjct: 125 YQPERAGEFH 134


>UniRef50_D1PEW3 Transcription elongation factor n=1 Tax=Prevotella copri DSM 18205
           RepID=D1PEW3_9BACT
          Length = 154

 Score =  117 bits (295), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 53/133 (39%), Gaps = 9/133 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHD 52
           +  P +     +A     L E   Y                    L+ A++     +  D
Sbjct: 22  VELPAVRDAIAEARDKGDLSENFEYHAAKREQGKLLSRISFKQKVLENARVIDKSRLKSD 81

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V + S++K  NL++      T+V P +    + ++S+ +P+  ALLG + G+ +  ++P
Sbjct: 82  TVGLLSKIKITNLANKCSMNYTIVNPHEADLHSGKISIKSPIAKALLGKKAGEEVMVKVP 141

Query: 113 GGVATHLEVLELE 125
            G      +  +E
Sbjct: 142 AG-LLKFRLDSVE 153


>UniRef50_Q4A759 Transcription elongation factor greA n=4 Tax=Mycoplasma
           RepID=GREA_MYCH7
          Length = 160

 Score =  117 bits (295), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 26/132 (19%), Positives = 52/132 (39%), Gaps = 11/132 (8%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHD 52
           + R  +I    DA     L E   Y                L   + +A++    ++   
Sbjct: 29  VERVNVIQEIKDARSQGDLSENAEYDVAREKQGIIESRIRELETIISKAKIIK-ADLGSS 87

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V++ S+V   N+  GE++   +V         +++S  +P+  ALLG   GD +  ++ 
Sbjct: 88  RVSIGSKVSLENVESGEIQTFQIVSSIDADPFKSKISNFSPIAQALLGQHQGDEVEVDV- 146

Query: 113 GGVATHLEVLEL 124
                 + +LE+
Sbjct: 147 -NEKYSVRILEV 157


>UniRef50_C0N448 Putative uncharacterized protein n=1 Tax=Methylophaga thiooxidans
           DMS010 RepID=C0N448_9GAMM
          Length = 137

 Score =  117 bits (294), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 41/135 (30%), Positives = 68/135 (50%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           + +P I +  LD  R++ L+        P+  +L  EL+RA++    ++P D+V+MNS V
Sbjct: 2   IHQPDIYVASLDLIRLEDLINTLWNKHSPVRLSLEDELERAKIIDSFQLPDDIVSMNSTV 61

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
           +            TLVYP  M    + LS+++P+G ALLG++ G+  +W    G      
Sbjct: 62  ELWVTKSDFPVYMTLVYPYGMKKDGSTLSILSPIGTALLGIKQGEEFYWPGRDGRNIKAR 121

Query: 121 VLELEYQPEAAGDYL 135
           +  + YQPE    Y 
Sbjct: 122 LENILYQPERERHYN 136


>UniRef50_Q01RT9 GreA/GreB family elongation factor n=2 Tax=Acidobacteria
           RepID=Q01RT9_SOLUE
          Length = 164

 Score =  117 bits (293), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 31/124 (25%), Positives = 47/124 (37%), Gaps = 9/124 (7%)

Query: 8   INDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHDVVTMNSR 59
              L A     L E   Y                L + L +  M    ++P D   + S 
Sbjct: 25  KEILKARLHGDLKENAEYHAAKDRQGFVSARLGQLKSRLGQLAMIDFTKIPRDKAGLGST 84

Query: 60  VKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHL 119
           V   ++   +     LV   +    N ++S  +P+G ALLG  VGD +    PGG    L
Sbjct: 85  VVVLDVKSDQEITYHLVTSEEADAPNGKVSTTSPIGRALLGKTVGDEVKVMSPGG-VKEL 143

Query: 120 EVLE 123
           E+L+
Sbjct: 144 EILK 147


>UniRef50_UPI0001C37CEA transcription elongation factor GreA n=1 Tax=Ruminococcus
           flavefaciens FD-1 RepID=UPI0001C37CEA
          Length = 156

 Score =  117 bits (293), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 49/132 (37%), Gaps = 9/132 (6%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHDV 53
            R  +      A     L E   Y                L   +D A++     +  D 
Sbjct: 25  KRKEVAERLKVARSYGDLSENAEYDEAKNEQAILEAHIAELQYTIDNAEIVDDSNISVDE 84

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           + M+S++  + L  G++   T+V          ++S  +P+G A +  RVGD    + P 
Sbjct: 85  IGMSSKITIKRLDTGKIETFTIVSTNHANVREGKISDASPIGKAAMKKRVGDVFIVDAPA 144

Query: 114 GVATHLEVLELE 125
           G     EV+E+ 
Sbjct: 145 GE-LKFEVVEIS 155


>UniRef50_Q2S2N3 Transcription elongation factor n=1 Tax=Salinibacter ruber DSM
           13855 RepID=Q2S2N3_SALRD
          Length = 164

 Score =  116 bits (292), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 49/133 (36%), Gaps = 9/133 (6%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHDV 53
            R  I     +A     L E   Y                +   + RA++     +    
Sbjct: 33  ERSRIADEIAEARAKGDLSENAEYDAAKEEQGKLEARIKQIEDTIARARIVDESTVDDSK 92

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
             + S V   NL  G+ +  TLV   +   S  ++SV +P+G  LL    GD +  ++P 
Sbjct: 93  AYILSDVTVENLDTGDEQTFTLVSEEEANISENKISVDSPIGEGLLAQEEGDEVSIDVPA 152

Query: 114 GVATHLEVLELEY 126
           G   H ++ ++  
Sbjct: 153 GTV-HFKIKDISR 164


>UniRef50_Q3Z8E7 Transcription elongation factor greA n=2 Tax=Dehalococcoides
           RepID=GREA_DEHE1
          Length = 156

 Score =  116 bits (292), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 29/134 (21%), Positives = 50/134 (37%), Gaps = 9/134 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHD 52
           + R  +I     A     + E   Y                +  EL  A +    +    
Sbjct: 24  VKRIDVIEEMRLAAMDKDMRENAPYHAAKEQRGQIEGRIKEIEHELKYADVSEYTDTNTS 83

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V M S VK R+  +GE    TLV P ++     ++S  +P+G A+     G+ I  E+P
Sbjct: 84  KVNMGSTVKLRDPKNGECCTYTLVSPKEIEPLKGKISASSPIGKAVFNRNKGEQIEIEVP 143

Query: 113 GGVATHLEVLELEY 126
            G      + ++ +
Sbjct: 144 SGTLQ-YIIEDISF 156


>UniRef50_B1H062 Transcription elongation factor n=1 Tax=uncultured Termite group 1
           bacterium phylotype Rs-D17 RepID=B1H062_UNCTG
          Length = 158

 Score =  116 bits (291), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 49/133 (36%), Gaps = 10/133 (7%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGL--------PIADALNAELDRAQMCSPEEMPHDV 53
            +P I      A     L E   Y                L +++  A++   + +  D 
Sbjct: 24  RKPLIQDEIASAREHGDLRENAEYCAAKETLANLIRRIMELTSKIACAKIIEEQNIDSDK 83

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           V +   V  ++   G      +V   +      ++S+ +P+   LLG   G+++  ELP 
Sbjct: 84  VFIGVTVTIKDE-YGADYQYAIVDLEEADPVANRISIQSPLAQGLLGHTAGETVAVELPA 142

Query: 114 GVATHLEVLELEY 126
           G     ++L++  
Sbjct: 143 GKT-KFKILKISR 154


>UniRef50_Q74EX3 Nucleoside diphosphate kinase regulator protein, putative n=1
           Tax=Geobacter sulfurreducens RepID=Q74EX3_GEOSL
          Length = 135

 Score =  116 bits (291), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 72/134 (53%), Gaps = 1/134 (0%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           M    I + + D  R++ +L+   +        L  EL  A +  P+++P +VVTMNSRV
Sbjct: 1   MDTRAIYVTEDDLSRLEEILDTIPFRDRKDLQKLEDELASAMIVDPKDVPPNVVTMNSRV 60

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
           K R+L   +    +LV+P     +  ++S+++P+G A+LG   GD++   +    A  + 
Sbjct: 61  KLRDLRADKEMTISLVFPNDANIAEGKISILSPIGTAILGFGAGDTLDLAVRS-FAKKIR 119

Query: 121 VLELEYQPEAAGDY 134
           + E+ YQP AAG +
Sbjct: 120 IEEVLYQPGAAGSH 133


>UniRef50_B3PF63 Regulator of nucleoside diphosphate kinase n=1 Tax=Cellvibrio
           japonicus Ueda107 RepID=B3PF63_CELJU
          Length = 180

 Score =  116 bits (291), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 42/120 (35%), Positives = 74/120 (61%), Gaps = 3/120 (2%)

Query: 6   IIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNL 65
           ++I++ D +R+  L+E          +AL+ E+ RA + +  ++P DVV M+S V F +L
Sbjct: 61  LVISNSDYQRLVQLIEDNDSPAA---EALDIEIGRATLVADAQLPADVVAMDSEVTFEDL 117

Query: 66  SDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
             GE +   LV+PA+      ++S+++PVG+AL+GLR+G SI W +P G    L+V+ ++
Sbjct: 118 DSGEQKTIQLVFPAQANVDQLKISILSPVGSALIGLRIGSSIDWPVPQGKVRRLKVIAVK 177


>UniRef50_A6NZ08 Transcription elongation factor n=1 Tax=Bacteroides capillosus ATCC
           29799 RepID=A6NZ08_9BACE
          Length = 157

 Score =  116 bits (291), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 47/133 (35%), Gaps = 9/133 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHD 52
           +    +     +A     L E   Y                +   L+   +   E     
Sbjct: 25  VREKEVADQIKEARSFGDLSENSEYDEAKNEQGKLYSRIAEVENILENCVVIEEEIHDGK 84

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V + S++K  ++   E     +V   +    N ++S  +P G ALLG  VG+ +  E P
Sbjct: 85  TVRLGSKLKVLDVEFNEELDYEVVGSQEADPMNGRISEDSPFGRALLGKSVGEDVVVEAP 144

Query: 113 GGVATHLEVLELE 125
            G   H +VL + 
Sbjct: 145 AGA-LHYKVLSIS 156


>UniRef50_C5BN87 Transcription elongation factor GreB n=5 Tax=Proteobacteria
           RepID=C5BN87_TERTT
          Length = 172

 Score =  115 bits (290), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 46/133 (34%), Gaps = 10/133 (7%)

Query: 2   SRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMPHDV 53
            RP +      A  +    E   Y                L   +D  ++    +     
Sbjct: 41  ERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYLRKRIDSLKVVRYAKEQEGS 100

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           V   S VK  N   GE +   +V   ++      +S+ +P+  ALL  +VGD    +   
Sbjct: 101 VYFGSWVKIENE-AGENKELRIVGYDEIFGEKNYISIDSPMAKALLRKKVGDEAIVKTEV 159

Query: 114 GVATHLEVLELEY 126
           G     E++E+ Y
Sbjct: 160 GEFC-WEIMEISY 171


>UniRef50_Q1H282 GreA/GreB family elongation factor n=2 Tax=Proteobacteria
           RepID=Q1H282_METFK
          Length = 165

 Score =  115 bits (290), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 51/125 (40%), Gaps = 7/125 (5%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
            R  + +   D      L              L A L+ A +  P   P D V   + V+
Sbjct: 48  ERQPLTMRKDDPAVQQRLA-----MIDRDLRYLQARLESAIVVDPATQPTDTVLFGATVE 102

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
             + + G      +V   +   +  ++S ++P+  AL+G ++GDS+ W  P G    LE+
Sbjct: 103 VEDEN-GNSHTFMIVGEDEADIATNRVSWVSPLAKALIGQKIGDSVTWHRPAG-NLELEI 160

Query: 122 LELEY 126
           + + Y
Sbjct: 161 IAIHY 165


>UniRef50_A5V983 GreA/GreB family elongation factor n=1 Tax=Sphingomonas wittichii
           RW1 RepID=A5V983_SPHWW
          Length = 166

 Score =  115 bits (290), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 43/130 (33%), Positives = 66/130 (50%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
            RP I + D +AE +  +          +++ L  E+DRA +     +P DVVTM+S V+
Sbjct: 37  RRPAIHMIDSEAETLANMAVAAEERIPQVSELLLEEIDRATLYKAARIPADVVTMHSHVE 96

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           F + ++G  R   LVYP        ++S++  VGA L+GLR G SI W    G    L +
Sbjct: 97  FVDEANGTSRTVQLVYPKDADIDAGRVSILTLVGAGLIGLREGQSILWPGRDGHRRLLTI 156

Query: 122 LELEYQPEAA 131
             +  + EAA
Sbjct: 157 TRVSREAEAA 166


>UniRef50_A6C278 Nucleoside diphosphate kinase regulator protein, putative n=1
           Tax=Planctomyces maris DSM 8797 RepID=A6C278_9PLAN
          Length = 137

 Score =  115 bits (289), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 49/135 (36%), Positives = 71/135 (52%), Gaps = 4/135 (2%)

Query: 1   MSRPTIIINDLDAERIDILLEQ---PAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMN 57
           M +  I I   D +R+  LL      A    P    L+AEL  A +   EE+P D+VTMN
Sbjct: 1   MPQQKIFITKTDYQRLQNLLLSDFTQAIGNKPYLSGLHAELAVAHIVESEEIPADIVTMN 60

Query: 58  SRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVAT 117
           S V+ R+L   E+   TLVYP        +LS++ P+G A+LG R+GD +      G + 
Sbjct: 61  STVRLRDLETDELETYTLVYPQDANIKEGKLSILTPIGTAILGYRIGDQLRSRALAGGS- 119

Query: 118 HLEVLELEYQPEAAG 132
            + V E+ +QPE +G
Sbjct: 120 KIRVEEILFQPERSG 134


>UniRef50_C1F9R4 Transcription elongation factor GreA n=1 Tax=Acidobacterium
           capsulatum ATCC 51196 RepID=C1F9R4_ACIC5
          Length = 165

 Score =  115 bits (289), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 31/127 (24%), Positives = 47/127 (37%), Gaps = 9/127 (7%)

Query: 5   TIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHDVVTM 56
            +      A  +  L E   Y                L   +    + +   +PHD V  
Sbjct: 23  ELPAEIKKAAALGDLSENAEYHMAKQRQEFVNARLGQLKKRMAELSLVNLANIPHDRVAF 82

Query: 57  NSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVA 116
            S V+  + S  E     LV   +   S   +S  +P+G AL+G +VGD+     P G  
Sbjct: 83  GSTVEVFDTSKDEKIEYKLVTSEESDVSKGLISTTSPIGRALIGKQVGDTATVVTPSG-N 141

Query: 117 THLEVLE 123
             LEVL+
Sbjct: 142 RELEVLK 148


>UniRef50_A1TUC9 GreA/GreB family elongation factor n=4 Tax=Burkholderiales
           RepID=A1TUC9_ACIAC
          Length = 136

 Score =  115 bits (289), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 47/130 (36%), Positives = 68/130 (52%), Gaps = 5/130 (3%)

Query: 5   TIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRN 64
             ++ DLD  R+  L  Q           L   L+ A + S   +  DVVTM SRV+  +
Sbjct: 10  ERVLTDLDFARLSRLASQQPAPPS-----LADLLENADVTSSRTVEADVVTMYSRVELVD 64

Query: 65  LSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
            + G  +V T+ YP     +   +SV++PVG++LLGLRVG +  W  P G A    V  +
Sbjct: 65  TATGARQVLTICYPRDADLAAGFVSVLSPVGSSLLGLRVGQTARWCTPRGEACEATVAGI 124

Query: 125 EYQPEAAGDY 134
           ++QPEA GDY
Sbjct: 125 QHQPEAEGDY 134


>UniRef50_B2SQJ5 Regulator of nucleoside diphosphate kinase n=8 Tax=Xanthomonadaceae
           RepID=B2SQJ5_XANOP
          Length = 215

 Score =  115 bits (289), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 47/130 (36%), Positives = 73/130 (56%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFR 63
           P+ +++  D  R + LL+ P++   P A AL+ EL RA++  P+++  DVVTM+SR++  
Sbjct: 83  PSTLVSSHDLARREALLDSPSFNKHPAATALSDELGRARVLPPDQIRGDVVTMHSRIECE 142

Query: 64  NLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLE 123
           +   G       V+P +    + ++ V+APVG+AL GL VG  I W  P G    L    
Sbjct: 143 DQLHGGRHTLPPVHPHEADVQHGRICVLAPVGSALGGLSVGQRIDWRTPDGRDLRLRATA 202

Query: 124 LEYQPEAAGD 133
           +  QP AAGD
Sbjct: 203 VHDQPTAAGD 212


>UniRef50_B2V1C0 Transcription elongation factor n=28 Tax=Clostridium
           RepID=B2V1C0_CLOBA
          Length = 155

 Score =  115 bits (288), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 29/134 (21%), Positives = 54/134 (40%), Gaps = 9/134 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGL--------PIADALNAELDRAQMCSPEEMPHD 52
           + R  I    L A       E   Y                L   +  A +    E+   
Sbjct: 23  VKRAEIAKEKLVAAAHGDRSENAEYKEACANYRENDNRIQYLMTMISTATVIDDTEIDKS 82

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            + +NS+ + + + D +  V TLV    +   N  +S+ + +G AL+G + G+++  E P
Sbjct: 83  SLGINSKARIKFVEDDDEDVITLVTTMDLDPENMLISIESDLGKALMGKKAGETVEVEAP 142

Query: 113 GGVATHLEVLELEY 126
            G    +++LE+ Y
Sbjct: 143 -GAKYTVKILEILY 155


>UniRef50_A2SJD8 Transcription elongation factor n=50 Tax=Proteobacteria
           RepID=A2SJD8_METPP
          Length = 213

 Score =  115 bits (288), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 33/139 (23%), Positives = 52/139 (37%), Gaps = 11/139 (7%)

Query: 2   SRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMPH-D 52
            RP ++     A +     E   Y                L   L+ A++  P      D
Sbjct: 77  ERPKVVETVSWAAKNGDRSENGDYLYGKKRLREIDRRIRFLTKRLEIAEVADPSVHRGSD 136

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V   + V +     G  R  T+    +  +   ++S ++PV  ALL  RVGD +    P
Sbjct: 137 QVFFGATVTYAAPD-GVERTITIKGIDEADNLQAEVSWISPVARALLKARVGDEVTLLTP 195

Query: 113 GGVATHLEVLELEYQPEAA 131
            G    +EV+E+ Y P  A
Sbjct: 196 QG-PQTIEVIEVRYPPRPA 213


>UniRef50_C8W826 Transcription elongation factor n=7 Tax=Coriobacteriaceae
           RepID=C8W826_ATOPD
          Length = 159

 Score =  115 bits (288), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 21/133 (15%), Positives = 44/133 (33%), Gaps = 9/133 (6%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHDV 53
               I+    +A     L E   Y              + +   L  A++          
Sbjct: 28  KHDEIVERIKEARGFGDLSENSEYDAAKEEQSHNESRINEIRQILSVAKVVEGGSKRKVT 87

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           V + + V+  +   G+     +V   +      ++S  +P G AL+G + GD + +  P 
Sbjct: 88  VAIGTTVELADAK-GKTTKYVIVGTTETNSLEHKISNESPAGEALIGHKKGDEVEFTTPN 146

Query: 114 GVATHLEVLELEY 126
           G      ++ +  
Sbjct: 147 GKVKKYTIISITR 159


>UniRef50_A6H247 Transcription elongation factor greA n=33 Tax=Bacteroidetes
           RepID=GREA_FLAPJ
          Length = 158

 Score =  114 bits (287), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 32/135 (23%), Positives = 51/135 (37%), Gaps = 9/135 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADAL--------NAELDRAQMCSPEEMPHD 52
           + RP    +  +A     L E   Y     A  L              A++    ++   
Sbjct: 25  IERPKASADIAEARDKGDLSENAEYDAAKEAQGLLELKIKKMEEVYSNARLIDESQLDVS 84

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
              + S VK +N S+G      LV  ++      ++SV +P+G  LLG  VG+     +P
Sbjct: 85  KALVLSHVKIKNQSNGMEMSYHLVAESEADLKTGKISVTSPIGKGLLGKSVGEIAEITVP 144

Query: 113 GGVATHLEVLELEYQ 127
            G     EVLE+   
Sbjct: 145 NG-ILKFEVLEITRD 158


>UniRef50_Q3SU57 GreA/GreB family elongation factor n=9 Tax=Bradyrhizobiaceae
           RepID=Q3SU57_NITWN
          Length = 151

 Score =  114 bits (287), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 43/139 (30%), Positives = 66/139 (47%), Gaps = 11/139 (7%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPE----------EMPHDV 53
           P I I+  D +R+  L E         A+ L  E+DRA++   +              ++
Sbjct: 11  PAIAISAHDIDRLRHLAEAAIEKYPATAEFLAREIDRAEIIPADGSLLDDTRDQRWKVNL 70

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           VTM S V F +   G+ R  TLVYP        ++S+++P+GAAL+GL  G SI ++ P 
Sbjct: 71  VTMQSEVTFIDDVSGQKRRVTLVYPEDADVDAGKISILSPIGAALIGLSAGQSIEFQTPS 130

Query: 114 GVATHLEVLEL-EYQPEAA 131
           G    L V+ +  Y P   
Sbjct: 131 GGWRSLTVIAVWSYWPRPE 149


>UniRef50_B8IFL5 GreA/GreB family elongation factor n=8 Tax=Methylobacterium
           RepID=B8IFL5_METNO
          Length = 141

 Score =  114 bits (287), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 44/123 (35%), Positives = 65/123 (52%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKF 62
           +P I +   D ER+  L          +A  L  ELDRAQ+ +        V M  +V+F
Sbjct: 14  KPRIKMTVEDHERLSALAAAAQDRMPDVASCLADELDRAQIVAGRGRLPPFVRMGCQVEF 73

Query: 63  RNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVL 122
           R+ + G V++ TLVYP +      ++SV+ P+GAAL+GL  G SI WE   G+   L VL
Sbjct: 74  RDDTTGRVQIVTLVYPGEANIEQGKISVLTPIGAALIGLSTGQSITWETRSGLTKSLTVL 133

Query: 123 ELE 125
           ++ 
Sbjct: 134 DVR 136


>UniRef50_A5VME9 Transcription elongation factor GreA n=49 Tax=Lactobacillaceae
           RepID=A5VME9_LACRD
          Length = 165

 Score =  114 bits (287), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 52/131 (39%), Gaps = 11/131 (8%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHDVV 54
           RP  I     A  +  L E   Y+               LN +L  A++ +P+      +
Sbjct: 37  RPAKIEQLKAARALGDLSENTEYSTAKRELRHLESRLRYLNKQLQYAEIVTPKN--DHTI 94

Query: 55  TMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGG 114
            + + V      D E     +V   +   +  ++S  +P+G A+L    G ++  E P  
Sbjct: 95  DLGTTVTIEFEDDHEQETYHIVGKQEADLAKQKISFDSPLGQAILHQTAGTTVTVEAPQ- 153

Query: 115 VATHLEVLELE 125
            +  ++++++E
Sbjct: 154 SSYKVKIVKVE 164


>UniRef50_C0QWD9 Transcription elongation factor n=2 Tax=Brachyspira
           RepID=C0QWD9_BRAHW
          Length = 154

 Score =  114 bits (287), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 29/124 (23%), Positives = 52/124 (41%), Gaps = 9/124 (7%)

Query: 10  DLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
             +A     L E   Y                L ++L   ++  P  +  D VT   RVK
Sbjct: 31  IAEAREKGDLKENAEYHAAKEKQGLLNAQISKLESDLAGCEIIDPANLDKDTVTFGKRVK 90

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
            ++ S   V    +V   +   S  +++++ P+   LLG ++GD +  ++P G    LE+
Sbjct: 91  VKDKSRNAVFEYRIVGELEADMSKNEITIVTPIAKGLLGKKIGDVVTIKVPAG-DKVLEI 149

Query: 122 LELE 125
           LE+ 
Sbjct: 150 LEIS 153


>UniRef50_A6NPJ1 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus
           ATCC 29799 RepID=A6NPJ1_9BACE
          Length = 197

 Score =  114 bits (287), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 30/131 (22%), Positives = 52/131 (39%), Gaps = 9/131 (6%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHDVV 54
           RP ++    +A     L E   Y                L   +  A + S +  P D V
Sbjct: 55  RPQLLEAVKEARGFGDLSENFEYKAAKQEKNRNESRIRFLENMIRTAVVISDQAAP-DTV 113

Query: 55  TMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGG 114
            +  +V      D E     +V   +    + ++S  +PVG+ALLG RVGD I+ ++   
Sbjct: 114 GLYDKVTVYLEEDDETETYQVVTTMRQDALHGRISKESPVGSALLGKRVGDRIYIQVNDN 173

Query: 115 VATHLEVLELE 125
              ++ +  +E
Sbjct: 174 YGYYVVIKAIE 184


>UniRef50_B0VIH5 Putative transcription elongation factor n=1 Tax=Candidatus
           Cloacamonas acidaminovorans RepID=B0VIH5_9BACT
          Length = 159

 Score =  114 bits (286), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 29/136 (21%), Positives = 53/136 (38%), Gaps = 13/136 (9%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHDV 53
            RP +I     A     L E   Y              D L       ++    E P D+
Sbjct: 25  ERPEVIKAVAIAREFGDLSENAEYKAARERQRAIDNEIDYLRRRSANLKVIDTSEFPKDM 84

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNT----QLSVMAPVGAALLGLRVGDSIHW 109
           V   +     +++  E     LV P ++   N     ++S+++P+G ALL  ++G+    
Sbjct: 85  VRFGTYCVAEDINTKECICYHLVGPEELNYYNEEGIQEVSIVSPIGKALLSKKIGEIAIV 144

Query: 110 ELPGGVATHLEVLELE 125
           + P G    L++ E++
Sbjct: 145 KAPIGE-RKLKIREIK 159


>UniRef50_Q04UP0 Transcription elongation factor n=6 Tax=Leptospira
           RepID=Q04UP0_LEPBJ
          Length = 927

 Score =  113 bits (284), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 30/134 (22%), Positives = 50/134 (37%), Gaps = 9/134 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHD 52
           +  P    +  +A+    L E   Y                L AE+  A +     +  D
Sbjct: 787 VEMPENSKDIGEAQERGDLRENAEYKAAMERQVQLQAAIKRLEAEIKSAIILDLTNVKTD 846

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            + +    K +N S GEV   +++           +S  +P+  +LLG +VGD+    L 
Sbjct: 847 KINIGVTAKLKNESTGEVVAYSILGAWDADTEKHIISYQSPLAKSLLGKKVGDAAVLNL- 905

Query: 113 GGVATHLEVLELEY 126
            G  T   VLE+  
Sbjct: 906 TGAETRYTVLEIGR 919


>UniRef50_A5IYH4 Transcription elongation factor greA n=3 Tax=Mycoplasma
           RepID=GREA_MYCAP
          Length = 163

 Score =  113 bits (284), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 55/135 (40%), Gaps = 11/135 (8%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHD 52
           + RP +  +  +A     L E   Y                L   L+ A++   +    +
Sbjct: 29  VERPAVQASLKEARAQGDLSENAEYDAARDRQSEVERRILELERILENAEIIDTKSAVQN 88

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLR-VGDSIHWEL 111
              + + V++ N+   +  V T++ P        ++S  +PV  A++    +GD +  E+
Sbjct: 89  KAGIGATVRYLNMKTNKELVVTIMGPHDSNPIENKISNESPVAQAIMEANGIGDVVEVEV 148

Query: 112 PGGVATHLEVLELEY 126
           P     +++VL++ Y
Sbjct: 149 P--QKYNIKVLDISY 161


>UniRef50_B3DVF3 Transcription elongation factor GreA fused to uncharacterized
           associated domain n=1 Tax=Methylacidiphilum infernorum
           V4 RepID=B3DVF3_METI4
          Length = 614

 Score =  113 bits (284), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 44/133 (33%), Gaps = 8/133 (6%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGL--------PIADALNAELDRAQMCSPEEMPHDV 53
             P    +   A     L E   Y                L + + RA+      +    
Sbjct: 474 KIPENSKDIAHARSYGDLRENHEYKAAKEMQVVLMRRKAELESMISRARATDFSNVDTTT 533

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           V + + V + +L         ++       S   +S +A  G +LLG + GD +   L  
Sbjct: 534 VNIGTVVSYTDLKTNRTNSVAILGAWDSNPSKGIISYLAAFGQSLLGHKTGDVLQVSLED 593

Query: 114 GVATHLEVLELEY 126
           G+ T + + ++  
Sbjct: 594 GITTEIRIDKISR 606


>UniRef50_D2RL35 GreA/GreB family elongation factor n=3 Tax=Veillonellaceae
           RepID=D2RL35_ACIFE
          Length = 172

 Score =  113 bits (284), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 24/136 (17%), Positives = 49/136 (36%), Gaps = 11/136 (8%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHDV 53
            R  +      A     + E   Y                L   +  AQ+    ++  +V
Sbjct: 26  KRQQVAERLKVAISYGDISENSEYDDAKNEQAFVEGRILTLENMIRNAQIIKDTDITKNV 85

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNT--QLSVMAPVGAALLGLRVGDSIHWEL 111
           V++  +VK  ++   +    T+V   +        ++S  +PVG A+LG +VG  +    
Sbjct: 86  VSLGCKVKIEDMETHDQEEYTVVGTTEADPMAEPPRISNESPVGKAILGQKVGAVVKVTT 145

Query: 112 PGGVATHLEVLELEYQ 127
           P G     +++ +   
Sbjct: 146 PIGE-LDYKIVAVSRP 160


>UniRef50_B0N6V6 Transcription elongation factor n=4 Tax=Bacteria RepID=B0N6V6_9FIRM
          Length = 161

 Score =  113 bits (283), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 52/137 (37%), Gaps = 12/137 (8%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHD 52
           + RP +I     A     L E   Y                ++  L  A++ S E+M   
Sbjct: 26  VERPKVIEELQLARSQGDLSENADYDAAREKQAHLESRIKEIDYMLQNAEVISEEQMDLK 85

Query: 53  VVTMNSRVKFRN--LSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWE 110
           VV   + V   +    D E     +V   +    N ++S  +P+  A+LG  V + +   
Sbjct: 86  VVKPGTTVTILDLSEKDAEPESYQIVGYTETDPLNGKISNESPLAKAVLGHGVNEIVTVG 145

Query: 111 LPGGVATHLEVLELEYQ 127
           +       ++++ +E++
Sbjct: 146 VAD--PYDVKIVNIEFK 160


>UniRef50_Q8P7P8 Transcription elongation factor greB n=53 Tax=Proteobacteria
           RepID=GREB_XANCP
          Length = 168

 Score =  113 bits (283), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 47/133 (35%), Gaps = 9/133 (6%)

Query: 2   SRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMPHDV 53
            RP ++     A       E   Y                L+  L+  ++          
Sbjct: 34  RRPEVVRALAAAAAEGDRSENAEYTYRKKQLGEIDRRVRYLSKRLEALRVVDTAPTDPQA 93

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           V   ++V+  +   GE+    +V P +       +S+ +P+  ALL  RV D    +LP 
Sbjct: 94  VFFGAQVELEDADSGELLRYRIVGPDETDAGRGWISIDSPLARALLKKRVDDEFEAQLPS 153

Query: 114 GVATHLEVLELEY 126
           G      V+ +EY
Sbjct: 154 GK-HTFVVVVVEY 165


>UniRef50_Q9JVD0 Transcription elongation factor greB n=64 Tax=Bacteria
           RepID=GREB_NEIMA
          Length = 163

 Score =  112 bits (282), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 29/134 (21%), Positives = 48/134 (35%), Gaps = 11/134 (8%)

Query: 2   SRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPE-EMPHD 52
            RP I+     A       E   Y                L   L+ A +  PE     D
Sbjct: 28  ERPEIVQIVNWAAGNGDRSENGDYLYGKRRMREIDRRIRFLTKRLEAAVVVDPELREATD 87

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V   + V      DG  +   +V   ++  +  ++S ++P+   L+  R GD +    P
Sbjct: 88  QVFFGATVGLL-RGDGREQTVKIVGIDEIDTAQNKISWISPLARCLIKAREGDEVVLNTP 146

Query: 113 GGVATHLEVLELEY 126
            G    +E+L +EY
Sbjct: 147 EGRE-EIEILSVEY 159


>UniRef50_B3PM73 Transcription elongation factor greA n=1 Tax=Mycoplasma arthritidis
           158L3-1 RepID=GREA_MYCA5
          Length = 159

 Score =  112 bits (282), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 49/133 (36%), Gaps = 11/133 (8%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPH- 51
           + RP +I    +A     L E   Y                +   LD  ++   +     
Sbjct: 28  VLRPQVIEEIKEARNQGDLSENAEYDAARDKQATIENEITEIQHILDNYEIIKTQTNRQV 87

Query: 52  DVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWEL 111
            VV + S V   +L D  V    +V        N ++S  +P+  A++G + G+ +  E 
Sbjct: 88  SVVRIGSNVSVVSLKDDTVINFQIVGALDTDPFNGKISNTSPLAKAVIGRKAGEVVEVEA 147

Query: 112 PGGVATHLEVLEL 124
           P      ++++ +
Sbjct: 148 PN--KYQVKIVHV 158


>UniRef50_A4E9C2 Transcription elongation factor n=1 Tax=Collinsella aerofaciens
           ATCC 25986 RepID=A4E9C2_9ACTN
          Length = 156

 Score =  112 bits (281), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 29/131 (22%), Positives = 48/131 (36%), Gaps = 11/131 (8%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHDVVT 55
             I+ +  +A     L E   Y                + A L  AQ+          V+
Sbjct: 29  KEIVEDIKEARAFGDLSENSEYDAAKDKQAQNAARIAEIQAILANAQV--AATTGDLTVS 86

Query: 56  MNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGV 115
           + S V   + + GEV   TLV   +      ++S  +PVG A++G   GDS+    P G 
Sbjct: 87  IGSTVSLIDPN-GEVMEVTLVGTTETNSLEHKISNESPVGHAIIGHGEGDSVEVVTPSGK 145

Query: 116 ATHLEVLELEY 126
                + ++  
Sbjct: 146 TRVYTIAKIAR 156


>UniRef50_UPI00017427C8 transcription elongation factor GreA n=1 Tax=candidate division TM7
           single-cell isolate TM7a RepID=UPI00017427C8
          Length = 151

 Score =  112 bits (281), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 26/132 (19%), Positives = 49/132 (37%), Gaps = 13/132 (9%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHDV 53
            R  I     +A     L E   Y                +   L  A + +        
Sbjct: 25  RRGEIAEKIAEARDYGDLSENAEYDAAREEQGIVETRIAEIENILQNAAIITGGV--SGQ 82

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           V + S V+   ++  +  V T+V P +      ++S  +P+GAAL+G +V D +    P 
Sbjct: 83  VGLGSVVEL--MTGSKTAVYTVVGPVEADPLEGKVSNESPIGAALMGKKVDDIVEINTPK 140

Query: 114 GVATHLEVLELE 125
           G     +++ ++
Sbjct: 141 GK-LEYKIISIK 151


>UniRef50_B5Y9H5 Transcription elongation factor n=1 Tax=Coprothermobacter
           proteolyticus DSM 5265 RepID=B5Y9H5_COPPD
          Length = 163

 Score =  112 bits (281), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 55/133 (41%), Gaps = 9/133 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHD 52
           + R  +     +A  +  L E   +                L   +  A++   E++  D
Sbjct: 28  VKRKEVAEKIQEARALGDLSENSEFEAAKEEQALLEERIARLETLVYNARVVKAEDLALD 87

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVY-PAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWEL 111
            V++ ++V   + S G      +V    ++   + ++S  +P+G+ LLG + GD +  +L
Sbjct: 88  QVSVGTKVLVLDESAGREESFIIVGNSEEVDPFSGKISSKSPLGSRLLGRKRGDRVEIKL 147

Query: 112 PGGVATHLEVLEL 124
             G     E+L++
Sbjct: 148 RNGSKAVYEILDI 160


>UniRef50_Q2N9J5 Transcription elongation factor n=2 Tax=Erythrobacter
           RepID=Q2N9J5_ERYLH
          Length = 159

 Score =  112 bits (280), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 31/134 (23%), Positives = 46/134 (34%), Gaps = 11/134 (8%)

Query: 2   SRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMPH-D 52
            RP I+     A       E   Y                L   +  A++  P E P  D
Sbjct: 27  ERPEIVEIVSWAAGNGDRSENGDYIYGRKRMREIDRELAHLARRMKHARVIEPSEQPDKD 86

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
                + +   +  D   +  TLV   +   S  ++   +P+  AL G RVGD     LP
Sbjct: 87  RAFFGATLTLADEDD-ARKTVTLVGDDEQDASAGKIGWSSPLARALRGARVGDLRTVHLP 145

Query: 113 GGVATHLEVLELEY 126
            G     EV+ + Y
Sbjct: 146 SGE-REWEVMAIAY 158


>UniRef50_B7CAB2 Transcription elongation factor n=5 Tax=Erysipelotrichaceae
           RepID=B7CAB2_9FIRM
          Length = 162

 Score =  112 bits (280), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 52/136 (38%), Gaps = 14/136 (10%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPE-----EM 49
           R  +I+   +A     L E   Y                L A +  A++ +       + 
Sbjct: 28  RQEVIVELQEARAQGDLSENADYDAAREHQAQVEGRIRELEAMIKNAEIITESADVEDKK 87

Query: 50  PHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHW 109
             +VV + S VK  +LSD +     +V   +    N +LS   P+   ++  +VGD    
Sbjct: 88  KKNVVKLGSTVKILDLSDNQEVTFNIVGTIEADPFNGKLSNTTPLAEVIMDHKVGDVCTV 147

Query: 110 ELPGGVATHLEVLELE 125
           +        +++LE++
Sbjct: 148 K-RVEEPYDVKILEIK 162


>UniRef50_B1AIU2 Transcription elongation factor greA n=28 Tax=Ureaplasma
           RepID=GREA_UREP2
          Length = 156

 Score =  112 bits (280), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 23/132 (17%), Positives = 45/132 (34%), Gaps = 9/132 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHD 52
           +  P I     DA     L E   Y              D +   L+  ++        D
Sbjct: 24  VKWPAITKQLQDAREQGDLSENADYDAAKNEQAALKKRKDEIEEILENYELIEDVLRSTD 83

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V++ S ++  N       V TLV          ++S+  P+G AL+  + G  +     
Sbjct: 84  EVSIGSTIEIYNYQKDCEEVITLVGSMDSDPFANKISIDTPLGKALVKQKKGTEVTVHTL 143

Query: 113 GGVATHLEVLEL 124
                 ++++++
Sbjct: 144 A-SPYKVKIIKI 154


>UniRef50_Q1PYP5 Transcription elongation factor n=1 Tax=Candidatus Kuenenia
           stuttgartiensis RepID=Q1PYP5_9BACT
          Length = 741

 Score =  112 bits (280), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 51/129 (39%), Gaps = 9/129 (6%)

Query: 5   TIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHDVVTM 56
               +  +A     L E   Y             A+ L A+L +     P  +  ++V+ 
Sbjct: 611 ENARDLGEAISRGDLRENAEYQAAREKQAQLIEKAERLKADLQKIVFIEPYTVKTNIVSP 670

Query: 57  NSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVA 116
            ++V  +N         TL+ P         +S ++P+G  LL  + G+++  +LP    
Sbjct: 671 GTKVTIKNKDKETTETYTLLGPWDADIDKNIISYLSPIGKGLLNKKTGETVTIQLPENEI 730

Query: 117 THLEVLELE 125
              +++++E
Sbjct: 731 VC-DIIKIE 738


>UniRef50_Q5SKM1 Transcription elongation factor n=5 Tax=Thermus RepID=Q5SKM1_THET8
          Length = 155

 Score =  112 bits (280), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 29/134 (21%), Positives = 47/134 (35%), Gaps = 12/134 (8%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHD 52
           + R  I  +   A     L E   Y                L   L RA +        D
Sbjct: 25  VKRQEISADFEQALEEGDLRENAGYDEARRAMWQNEARIAQLEDLLSRAVIVENGSF--D 82

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V +  +V+      GE     +V   +    + ++S  +P+G ALLG +VGD +     
Sbjct: 83  QVALGCQVELE-TETGERLSLAIVGSHEADIFSGKISDESPLGQALLGKKVGDVVEIRGK 141

Query: 113 GGVATHLEVLELEY 126
            G      +LE++ 
Sbjct: 142 KGAQV-YTILEIKP 154


>UniRef50_C4ZAT8 Transcription elongation factor GreA n=21 Tax=Firmicutes
           RepID=C4ZAT8_EUBR3
          Length = 167

 Score =  112 bits (280), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 48/133 (36%), Gaps = 9/133 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHD 52
           + R   + +   A     L E   Y                L   +  A +   +E   D
Sbjct: 23  VVRKKALDDVKVARAQGDLSENFEYKAAKQFKNQNESRIRYLEKMIKTAVVI-SDESKDD 81

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V M + V      D E     +V   +       +S  +P+GAA+ G +VGD    ++ 
Sbjct: 82  EVGMFNTVDVYFEDDDETETYKIVTTVRGNSLKNLISKESPLGAAIFGHKVGDRCEVKVN 141

Query: 113 GGVATHLEVLELE 125
              +  +++++++
Sbjct: 142 DDYSYFVKIMKIQ 154


>UniRef50_B0P8A6 Transcription elongation factor n=1 Tax=Anaerotruncus colihominis
           DSM 17241 RepID=B0P8A6_9FIRM
          Length = 151

 Score =  112 bits (280), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 31/132 (23%), Positives = 54/132 (40%), Gaps = 9/132 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHD 52
           ++R  I      A     L E   Y                L  +L   ++   +++  D
Sbjct: 19  VTRGEISEKIRVARGFGDLSENSEYDEAKNEQAVVEARIKKLEDQLKHVKIIERDQISTD 78

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
           VV++ SRVK  ++   E  V T+    +  +    +S  +PVG  L+G +VGD +    P
Sbjct: 79  VVSVGSRVKILDMDYDEEMVYTIASSVESHNDLESISDESPVGKGLIGHKVGDVVEIHAP 138

Query: 113 GGVATHLEVLEL 124
                 L++LE+
Sbjct: 139 A-AVLKLKILEI 149


>UniRef50_Q12SN9 Transcription elongation factor GreB n=17 Tax=Bacteria
           RepID=Q12SN9_SHEDO
          Length = 166

 Score =  111 bits (279), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 45/134 (33%), Gaps = 11/134 (8%)

Query: 3   RPTIIINDLDAERIDILLEQPAYA--------GLPIADALNAELDRAQMCSPEEMPHDVV 54
           RP I      A  +    E   Y                L   ++  ++          V
Sbjct: 32  RPEITKKVAWAASLGDRSENADYKENKRLLRQIDGRVRFLRKRIEALKVVPYAAEQEGKV 91

Query: 55  TMNSRVKFRNLSDGEVRVRTLVYPAKM-TDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
              + V+  N  +G  +   +V P ++  D+   +S+ +P+  ALL   V D      P 
Sbjct: 92  FFGAWVEIEN-DEGVKKRFRIVGPDEIYGDAKGYISIDSPMARALLKKEVDDDASVLTPT 150

Query: 114 GVATHLEVLELEYQ 127
           G      + ++ YQ
Sbjct: 151 GEQFWY-INKIFYQ 163


>UniRef50_B2KBD2 GreA/GreB family elongation factor n=1 Tax=Elusimicrobium minutum
           Pei191 RepID=B2KBD2_ELUMP
          Length = 156

 Score =  111 bits (279), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 51/131 (38%), Gaps = 9/131 (6%)

Query: 5   TIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHDVVTM 56
            + +   +A +   L E   YA               L  +L  AQ+    ++      +
Sbjct: 27  KLSLEIGEAAQQGDLRENAEYAAAKSRQEETLVKIQDLEQKLRNAQITDDIQVDKSEARI 86

Query: 57  NSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVA 116
            + V   ++S       TLV   +       LSV +P+  ++LG + G+     LP G  
Sbjct: 87  GATVTVHDISADIDFTYTLVGSMESNPEKGLLSVQSPLAVSILGKKEGEEFEAVLPKGKK 146

Query: 117 THLEVLELEYQ 127
              ++++LEY+
Sbjct: 147 M-YKLVKLEYK 156


>UniRef50_A8LN19 GreA/GreB family elongation factor n=8 Tax=Alphaproteobacteria
           RepID=A8LN19_DINSH
          Length = 148

 Score =  111 bits (279), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 44/130 (33%), Positives = 62/130 (47%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
            RP I+IN  D   I+ L E        +AD L  E+ RA++    +MP +V+ +     
Sbjct: 17  RRPRIVINADDLSHIEALAEGAMDRNPALADRLLEEIARARIVPAAKMPLNVIGIGKSAT 76

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           FR+ + G+ R  TLVYP     S  ++SVM P+G ALLGL  G   HW   G     L V
Sbjct: 77  FRDETTGQERTVTLVYPEDADISRARVSVMTPIGVALLGLAEGAVFHWNTRGEERRMLTV 136

Query: 122 LELEYQPEAA 131
           + +       
Sbjct: 137 IRVSDPAAPE 146


>UniRef50_A9BFC0 Transcription elongation factor greA n=12 Tax=Thermotogaceae
           RepID=GREA_PETMO
          Length = 159

 Score =  111 bits (279), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 53/130 (40%), Gaps = 9/130 (6%)

Query: 5   TIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPE-EMPHDVVT 55
            +     +A  +  L E   Y                ++  LD A++        +  V+
Sbjct: 30  EVAERIKEARELGDLSENSEYEEAKNEQGMIDSRIKEIDYILDNAEIIENGGNHDNSTVS 89

Query: 56  MNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGV 115
           +  +VK ++      +   LV P +      ++S+ +P+G +LLG + G+ I+ +   G 
Sbjct: 90  LGKKVKIKDYRLNREQEFVLVTPQEANIEENKISIESPIGRSLLGRKKGEVINIKTARGS 149

Query: 116 ATHLEVLELE 125
           +  +E+ E+ 
Sbjct: 150 SKKIEIKEIS 159


>UniRef50_C6VSR5 GreA/GreB family elongation factor n=2 Tax=Sphingobacteriales
           RepID=C6VSR5_DYAFD
          Length = 134

 Score =  111 bits (279), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 31/125 (24%), Positives = 62/125 (49%), Gaps = 1/125 (0%)

Query: 5   TIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRN 64
            +I+   D + +    +           +L  EL+RA +    E+P   + +NS VK R 
Sbjct: 7   PVILGKDDFKLLKQFAQTFPDNNSSETMSLAYELNRAVVVEDNELPAGSIRLNSYVKVRE 66

Query: 65  LSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
            +  +    ++V P     +  ++S++ P+GAAL+GL  G+++ W++P G     ++L++
Sbjct: 67  TTTNKEMAFSIVMPKDADIAKQRISILTPMGAALIGLCKGETVEWKMPAG-IRRFKILDV 125

Query: 125 EYQPE 129
            Y  E
Sbjct: 126 WYDQE 130


>UniRef50_B5ZLJ0 Transcription elongation factor GreB n=5 Tax=Proteobacteria
           RepID=B5ZLJ0_GLUDA
          Length = 180

 Score =  111 bits (279), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 34/139 (24%), Positives = 52/139 (37%), Gaps = 11/139 (7%)

Query: 2   SRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPE-EMPHD 52
            RP I+     A       E   Y                L   +++A +  P  +   D
Sbjct: 42  ERPRIVDIVSWAAGNGDRSENGDYLYGKKRLREIDRRVRFLTRRIEKAIVVDPAAQTRRD 101

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V   + V +    D E R   +V   +   +  Q+S+ +PV  ALLG RVGD +    P
Sbjct: 102 RVFFGATVTYVTEDDTE-RTVVIVGVDESDLAAGQVSLASPVARALLGGRVGDEVRLLTP 160

Query: 113 GGVATHLEVLELEYQPEAA 131
            G    +E+L + Y   A 
Sbjct: 161 AGAEM-IEILRIAYPAPAE 178


>UniRef50_UPI0001746370 transcript cleavage factor/unknown domain fusion protein n=1
           Tax=Verrucomicrobium spinosum DSM 4136
           RepID=UPI0001746370
          Length = 627

 Score =  111 bits (278), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 52/142 (36%), Gaps = 11/142 (7%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADAL--------NAELDRAQMCSPEEMPHD 52
           +  P    +   A     L E   Y       A+          EL RA+      +  +
Sbjct: 482 VKIPQNKKDIQIAREYGDLRENFEYKSARQHQAVLLRMQSTYERELRRARGTDFVGVSTE 541

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V + + V  +++  G+   +T++         + LS ++ +  AL+G RVGD       
Sbjct: 542 TVGIGTIVDLQDVGTGKTETQTILGAWDGDPDQSILSYLSEMAKALIGKRVGDEAELPTD 601

Query: 113 GGVATHLEVLELEY---QPEAA 131
                 ++++ +     Q EAA
Sbjct: 602 THGTRKVKIVSIRPYRTQAEAA 623


>UniRef50_C6WYK0 GreA/GreB family elongation factor n=2 Tax=Methylophilaceae
           RepID=C6WYK0_METML
          Length = 125

 Score =  111 bits (278), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 42/125 (33%), Positives = 66/125 (52%), Gaps = 9/125 (7%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           M    +I++D D  R+ +L            + L  EL RA +   +++P DVV +NSRV
Sbjct: 2   MEIDKLILSDQDYARLSMLAND---------ELLGDELSRAIVVPADQVPADVVRINSRV 52

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
            + + S G  R   LV+P        ++SV++PVG+ALLGL+ G  I W  P G +  L+
Sbjct: 53  IYLDESSGLSREVELVFPEGADLKFGKISVLSPVGSALLGLKEGQVIDWPFPHGQSRRLK 112

Query: 121 VLELE 125
           V+ + 
Sbjct: 113 VVSVA 117


>UniRef50_A7VBG3 Putative uncharacterized protein n=1 Tax=Clostridium sp. L2-50
           RepID=A7VBG3_9CLOT
          Length = 195

 Score =  110 bits (277), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 51/132 (38%), Gaps = 9/132 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHD 52
           + R   +    +A     L E   Y                L+  +  A++   +E   D
Sbjct: 53  VVRKEKLEAVKEARAQGDLSENFEYYAAKKDKNANEKRIRYLDRMVRTAEIIK-DESADD 111

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V +N+ V+     D E     +V   +    N  +S ++P+G ALLG +VGD +     
Sbjct: 112 EVGLNNTVRVYFEEDEEEDTYRIVTTVREDVLNGIISNISPMGKALLGHKVGDRVEVVPG 171

Query: 113 GGVATHLEVLEL 124
            G   H+ + E+
Sbjct: 172 KGDPFHIVIREI 183


>UniRef50_D0WJ76 Transcription elongation factor n=1 Tax=Slackia exigua ATCC 700122
           RepID=D0WJ76_9ACTN
          Length = 161

 Score =  110 bits (277), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 32/133 (24%), Positives = 52/133 (39%), Gaps = 11/133 (8%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHDV 53
            R  +      A     + E   Y                +N  L  A +        + 
Sbjct: 32  KRAEVGERIRVAREFGDISENSEYDDAKNEQGLMEARIAQINDILSNAVLVE-APKRSNR 90

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           V + S V       G  RV T+V  A+   S+ ++S  +PVGAALLG + GD    E P 
Sbjct: 91  VNIGSTVTV--DMGGRERVFTIVGAAEADVSSGKISNESPVGAALLGGKKGDHFTAEGPT 148

Query: 114 GVATHLEVLELEY 126
           G    ++++++E+
Sbjct: 149 GRVIEMDIVKIEH 161


>UniRef50_C7N7T1 Transcription elongation factor n=1 Tax=Slackia heliotrinireducens
           DSM 20476 RepID=C7N7T1_SLAHD
          Length = 155

 Score =  110 bits (276), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 32/133 (24%), Positives = 50/133 (37%), Gaps = 11/133 (8%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHDV 53
            R  +      A     + E   Y                +N  L  A +        + 
Sbjct: 26  KRAEVGERIKIAREFGDISENSEYDDAKNEQGMLEVRIAQINDILANATVVE-APKRSNR 84

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           VT+ S V       G  RV T+V  A+   +  ++S  +PVG+ LLG + GD +  E P 
Sbjct: 85  VTVGSTVTV--DMGGRERVFTIVGGAEANAAEGKISNDSPVGSVLLGSKKGDQLTTEGPT 142

Query: 114 GVATHLEVLELEY 126
           G    + VL +E+
Sbjct: 143 GRKIEITVLNIEH 155


>UniRef50_B4RF21 Transcription elongation factor n=2 Tax=cellular organisms
           RepID=B4RF21_PHEZH
          Length = 214

 Score =  110 bits (276), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 42/126 (33%), Positives = 60/126 (47%), Gaps = 4/126 (3%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
             PT+ + + D +R+       A    P A+ L  ELDRA +    E     V + S V+
Sbjct: 93  RTPTVRVAEADYDRL----LNLADHDGPGAELLARELDRAIVVREGEKSRPFVRLGSTVE 148

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           +R+    +VR   LV P        +LSV++PVGAALLGL VGD+  W  P G    + V
Sbjct: 149 YRDRLTEKVRTVELVPPDAADIDANRLSVLSPVGAALLGLSVGDTFSWTAPDGRPRVVTV 208

Query: 122 LELEYQ 127
             +   
Sbjct: 209 EAVRRD 214


>UniRef50_B1ZZX3 GreA/GreB family elongation factor n=3 Tax=Verrucomicrobia
           RepID=B1ZZX3_OPITP
          Length = 616

 Score =  110 bits (275), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 46/133 (34%), Gaps = 9/133 (6%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADA--------LNAELDRAQMCSPEEMPHDV 53
             P        A     L E   Y                L  +L RA++   ++   D 
Sbjct: 479 KIPENSKAIAAAREHGDLRENSEYKMAKQEQQVLMAHKTNLERDLGRARISDFKDASIDQ 538

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           V++ + V+  ++ DG     T++           +S   P GAALLG + GD I+ +   
Sbjct: 539 VSVGTVVEVASVKDGHHTTYTVLGAWDGDPEKHFISYKTPFGAALLGKKTGDVINVKT-D 597

Query: 114 GVATHLEVLELEY 126
                  ++ +  
Sbjct: 598 ASDEDYAIVSIAR 610


>UniRef50_B2S1W7 Transcription elongation factor greA n=6 Tax=Treponema
           RepID=GREA_TREPS
          Length = 162

 Score =  110 bits (275), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 52/133 (39%), Gaps = 9/133 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIAD--------ALNAELDRAQMCSPEEMPHD 52
           +  P        A  +  L E   Y                L  E++RAQ+  P  +   
Sbjct: 27  VRIPENSREIGRALELGDLRENAEYKAAREEQTRLNNMVTRLQEEIERAQVFDPTTVVAG 86

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V+  + +  +N + GE    T++ P +       +S M+P+G+ LL  + G+ + + + 
Sbjct: 87  RVSFGTVISLKNHTSGEDETYTILGPWESAPERGIISYMSPLGSNLLNRKTGEQLAFTV- 145

Query: 113 GGVATHLEVLELE 125
           G      E+L + 
Sbjct: 146 GEHEKVYEILSIS 158


>UniRef50_C7T958 Transcription elongation factor n=4 Tax=Lactobacillus rhamnosus
           RepID=C7T958_LACRG
          Length = 165

 Score =  109 bits (274), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 30/138 (21%), Positives = 55/138 (39%), Gaps = 13/138 (9%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHDVV 54
           RP  I N  +A  +    E   Y+               L+  +  A++ +P     ++ 
Sbjct: 26  RPAKIKNLAEAAALGDRSENAEYSAAKRELRQLEGRLRYLDKLIRYAKVTTPAA--ANLA 83

Query: 55  TMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGG 114
            + + V      D +     LV PA+      +L++ +P+GAA+    VGD++    P G
Sbjct: 84  DIGNWVTLEFDDDQDEDTYELVGPAEAGMGAAKLAINSPLGAAVRRHHVGDTVTVTAPSG 143

Query: 115 VATHLEVLELEYQPEAAG 132
               + V+ +   P A G
Sbjct: 144 T-YQVTVMAIS--PHAPG 158


>UniRef50_P47524 Transcription elongation factor greA n=4 Tax=Mycoplasma
           RepID=GREA_MYCGE
          Length = 161

 Score =  109 bits (274), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 50/135 (37%), Gaps = 11/135 (8%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHD 52
           + RP II    +A     L E   Y                +   L  A++ S  +    
Sbjct: 26  VKRPEIIRLLQEARDQGDLSENADYDAAKAQQGEIETRIAEIQDILANAKLISDHQAKTK 85

Query: 53  V--VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWE 110
           V  V++ S V+  + S       T+V   +      ++S  +P+  A+ G  +GD     
Sbjct: 86  VTKVSLGSTVEIYDYSSKSNEKYTIVGTLEANPEEHKISNESPLALAIYGRLIGDECDV- 144

Query: 111 LPGGVATHLEVLELE 125
           +   V   +++L++ 
Sbjct: 145 VGIEVPYRVKILKIS 159


>UniRef50_Q0B0N4 Transcription elongation factor greA n=6 Tax=Clostridia
           RepID=GREA_SYNWW
          Length = 159

 Score =  109 bits (273), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 57/133 (42%), Gaps = 9/133 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHD 52
           + R  +      A     + E   Y               +L   L +A++   E++  D
Sbjct: 27  VKREEVAERIKQAIAFGDITENSEYEDAKNEQAFIEGRIISLEKTLKKARLMEDEDIRTD 86

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
           VV++ SR+  + +  G     TLV   +    + ++S  +PVG A++G +V  ++  E P
Sbjct: 87  VVSLGSRITLKEMKSGREVTVTLVSSVESKLKDGKISDESPVGKAIMGKKVKSTVSVEAP 146

Query: 113 GGVATHLEVLELE 125
            G     +++++E
Sbjct: 147 AGTI-KYKIIKVE 158


>UniRef50_B9L0L0 Transcription elongation factor greA n=1 Tax=Thermomicrobium roseum
           DSM 5159 RepID=GREA_THERP
          Length = 156

 Score =  109 bits (273), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 34/133 (25%), Positives = 53/133 (39%), Gaps = 12/133 (9%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCS-PEEMPHD 52
            RP I     +A     + E  AY                +   L R ++   P +    
Sbjct: 27  RRPEIARVIQEAREHGDIRENAAYDAAKHDQAFIEGRIREIEELLKRVELIEQPTDGDRS 86

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
           VV + S V      DGE+   T+V   +   S  ++S  +PVG ALLG R G+ +  E P
Sbjct: 87  VVRVGSTVTIEI--DGEIETYTIVGAIEAKPSAGRISNESPVGRALLGHRAGEIVPIETP 144

Query: 113 GGVATHLEVLELE 125
            G      ++E++
Sbjct: 145 NGTLMA-RIIEVQ 156


>UniRef50_B0T7C4 GreA/GreB family elongation factor n=1 Tax=Caulobacter sp. K31
           RepID=B0T7C4_CAUSK
          Length = 139

 Score =  109 bits (273), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 43/130 (33%), Positives = 70/130 (53%), Gaps = 1/130 (0%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           ++RP II+ + +A+R+  L  +   A    AD L  E++RA++ +  +MP  VV M S V
Sbjct: 8   VARPDIILAETEADRLSALATRLRDAAPQAADLLLEEIERAEIRADLDMPRTVVRMESVV 67

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
           +F + + G  R   LVYP     +  ++SV++ VGA L+GL    +I W    G    L 
Sbjct: 68  QFVDEAHGNPRTVLLVYPRDADIAAGKVSVLSFVGAGLIGLSPHQAIQWPDRNGRQRTLR 127

Query: 121 VLELEYQPEA 130
           +L++   PE 
Sbjct: 128 ILKV-RPPER 136


>UniRef50_Q2SSM5 Transcription elongation factor greA n=6 Tax=Mollicutes
           RepID=GREA_MYCCT
          Length = 157

 Score =  109 bits (273), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 22/134 (16%), Positives = 54/134 (40%), Gaps = 10/134 (7%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEM-PH 51
           ++RP +I   ++A     L E   Y                +   ++RA++    +    
Sbjct: 25  VTRPKVIEELVEARNQGDLSENADYDAARNRQAEVEARIKEVETLINRAKVIDNSKTHST 84

Query: 52  DVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWEL 111
             V + S V+F +  D + +   +V   +    +  +S  +P+  A+LG ++GD++  + 
Sbjct: 85  GEVKIGSTVEFLSSLDHKTKEIKIVGAIEADPFSRLISNESPIAKAILGKKIGDTVEIKD 144

Query: 112 PGGVATHLEVLELE 125
                  + +  ++
Sbjct: 145 IL-KPYKITIKSIK 157


>UniRef50_B9XT30 GreA/GreB family elongation factor n=1 Tax=bacterium Ellin514
           RepID=B9XT30_9BACT
          Length = 606

 Score =  109 bits (272), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 45/133 (33%), Gaps = 9/133 (6%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGL--------PIADALNAELDRAQMCSPEEMPHDV 53
             P        A     L E   Y                L +EL RA+         D 
Sbjct: 471 KIPANSKEIAIARSYGDLRENHEYKAAKEMQKILMRRKAELESELVRARGTDYLNPKTDA 530

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           V++ + VK  +L+   +    ++           +S +AP+  +LL  + G+ + +E+  
Sbjct: 531 VSIGTIVKVTDLNSSHIEHFNILGAWDSDPEKNVISYLAPLAQSLLNRKPGEEVDYEM-D 589

Query: 114 GVATHLEVLELEY 126
           G      + E+  
Sbjct: 590 GQKRRFRIDEITP 602


>UniRef50_C7PP41 Transcription elongation factor n=1 Tax=Chitinophaga pinensis DSM
           2588 RepID=C7PP41_CHIPD
          Length = 157

 Score =  108 bits (270), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 44/117 (37%), Gaps = 9/117 (7%)

Query: 17  DILLEQPAYAGLPIADA--------LNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDG 68
             L E   Y     A          L + +  A++   + +    V++  +V   N+++ 
Sbjct: 41  GDLKENAEYDAAKEAQGMHEAKVAILESAIATARIVEADSIDTSKVSILCKVTITNMANK 100

Query: 69  EVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
           +     LV   +      ++SV +P+G  LLG  VG+      P G     ++  + 
Sbjct: 101 KTVTYQLVSEKEADLKLNKISVTSPIGKGLLGKAVGEIADVHAPNGS-LKFKIENIT 156


>UniRef50_B4D3Z7 GreA/GreB family elongation factor n=1 Tax=Chthoniobacter flavus
           Ellin428 RepID=B4D3Z7_9BACT
          Length = 609

 Score =  108 bits (270), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 19/132 (14%), Positives = 41/132 (31%), Gaps = 9/132 (6%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGL--------PIADALNAELDRAQMCSPEEMPHDV 53
             P  +     A     L E   +                   +L +A+           
Sbjct: 475 KIPENVKEIQVARSYGDLRENFEFKAAKEMQRVLSRRRAETERDLAQARGTDFANPDTAQ 534

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           V++ + V  +   DG   V T++           +S  + +  AL+G + G+ ++     
Sbjct: 535 VSVGTIVTLKETGDGRTDVYTILGAWDGDPDKGIVSYQSALAQALIGHKPGEQVNVPTEH 594

Query: 114 GVATHLEVLELE 125
           G      + ++E
Sbjct: 595 G-DRTARIEKIE 605


>UniRef50_D0KZQ0 Transcription elongation factor GreB n=1 Tax=Halothiobacillus
           neapolitanus c2 RepID=D0KZQ0_HALNC
          Length = 175

 Score =  108 bits (270), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 25/141 (17%), Positives = 49/141 (34%), Gaps = 13/141 (9%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMPHD 52
           + R  ++    +A  +    E   Y                L   L   ++        +
Sbjct: 24  VERRLVVQAVSEAAALGDRSENAEYIYGKRRLREIDRRIRYLQKRLGDIKVVRQPPTDMN 83

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V   +R+      D   +   LV P ++  +N  +S+ +P+  A+LG  +   +   LP
Sbjct: 84  KVYFGARITLLYADD-REQTVCLVGPDEIDPANQLISIDSPLAKAVLGKALDAEVVLFLP 142

Query: 113 GG----VATHLEVLELEYQPE 129
                    H E++ +EY  E
Sbjct: 143 SETSTPRRVHAEIIAIEYPSE 163


>UniRef50_A0LES5 GreA/GreB family elongation factor n=1 Tax=Syntrophobacter
           fumaroxidans MPOB RepID=A0LES5_SYNFM
          Length = 155

 Score =  108 bits (270), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 50/133 (37%), Gaps = 9/133 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHD 52
           + RP +I    +A    I +E   Y                L  +L   ++    +    
Sbjct: 23  VVRPEVIEELQEARTGGIKIENQQYMLARERHMVLQKKIQDLERKLASCEIVVGRKFFFK 82

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
                + V  +N+  GE +   LV P +    + +LS+ +PVG  L+G R G+ +    P
Sbjct: 83  QAEFGTIVVIQNIETGETQRYQLVGPYESNVVDGKLSIDSPVGRHLVGRREGEEVLVYTP 142

Query: 113 GGVATHLEVLELE 125
            G      V+ + 
Sbjct: 143 AG-VRMYRVVSIT 154


>UniRef50_B7L307 GreA/GreB family elongation factor n=1 Tax=Methylobacterium
           chloromethanicum CM4 RepID=B7L307_METC4
          Length = 147

 Score =  107 bits (269), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 47/131 (35%), Positives = 67/131 (51%), Gaps = 2/131 (1%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLP--IADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           RP +II   D   +  +      +     +   L  ELDRA +  P  +P  VVTM++RV
Sbjct: 10  RPPLIIPMSDFRFLREIAAGTGVSQARGSVVAWLAEELDRATVVPPGAVPPRVVTMHARV 69

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
           ++R+    +VR  TL YP +     + +SV+ PVGAAL+GL  G SI W  P G    L 
Sbjct: 70  EYRDDVTDQVRCVTLTYPGEEDAYASGISVLTPVGAALVGLSEGHSIRWRTPSGGLRGLT 129

Query: 121 VLELEYQPEAA 131
           VL + + P  A
Sbjct: 130 VLRVRFAPHHA 140


>UniRef50_D1C6T4 Transcription elongation factor n=1 Tax=Sphaerobacter thermophilus
           DSM 20745 RepID=D1C6T4_SPHTD
          Length = 157

 Score =  107 bits (269), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 45/133 (33%), Gaps = 12/133 (9%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEM-PHD 52
            R  I      A     L E   Y                +   L RA++          
Sbjct: 27  RRVEIAQALQAAREEGDLRENAGYDAAKHDQAFIEGRIREIEDILRRAEVIDEAPNGDAR 86

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
           VV + S V      DG     T+V   +   +  ++S  +P G ALLG R G+ +  + P
Sbjct: 87  VVRLGSTVTIEI--DGAQETYTIVGAVEAKPAAGRISNESPFGRALLGHREGEEVEIQTP 144

Query: 113 GGVATHLEVLELE 125
                H  ++ +E
Sbjct: 145 A-AVLHARIVNVE 156


>UniRef50_A7IJH2 GreA/GreB family elongation factor n=4 Tax=Rhizobiales
           RepID=A7IJH2_XANP2
          Length = 143

 Score =  107 bits (269), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 43/124 (34%), Positives = 65/124 (52%), Gaps = 2/124 (1%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFR 63
           P ++++  D ER+  L          +A+ L AELDRA++     +P   V M S+V + 
Sbjct: 16  PALVLSHPDHERLAGLATAALDRIPDVAEELLAELDRARLVPIGRVPATAVQMGSKVTYE 75

Query: 64  NLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLE 123
             + G  R  TLVYP     +  ++SVM P+GAAL+GL  G SI W    G    L+V+E
Sbjct: 76  --AGGNARTVTLVYPEDADIAAARVSVMTPIGAALIGLSKGQSICWTARDGRRHELKVIE 133

Query: 124 LEYQ 127
           ++  
Sbjct: 134 VQPP 137


>UniRef50_A9EFF1 GreA/GreB family elongation factor n=1 Tax=Oceanibulbus indolifex
           HEL-45 RepID=A9EFF1_9RHOB
          Length = 146

 Score =  107 bits (269), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 44/125 (35%), Positives = 71/125 (56%), Gaps = 1/125 (0%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
             P +I+N  D   ++ L E   +    +AD    E+ RAQ+   ++MP DVV + S+V 
Sbjct: 14  RNPHLILNAADLVHLEELAEGMMHRHPTLADRFFEEIGRAQIVEDQQMPGDVVGIGSKVT 73

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATH-LE 120
           +R+ + G+ +  TLVYP     + +Q+SV+ P+G ALLGLR G S +W+       H L 
Sbjct: 74  YRDETTGQNKSVTLVYPEDADITRSQVSVITPIGVALLGLREGASFYWDTRRENQRHMLT 133

Query: 121 VLELE 125
           +L++E
Sbjct: 134 ILKVE 138


>UniRef50_A9NGN4 Transcription elongation factor greA n=7 Tax=Acholeplasmataceae
           RepID=GREA_ACHLI
          Length = 158

 Score =  107 bits (268), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 19/133 (14%), Positives = 46/133 (34%), Gaps = 9/133 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHD 52
           + R   +    +A     L E   Y                + + L   ++    +    
Sbjct: 27  VKRVENLEALKEAREQGDLSENADYDAARNEQARIEARILEIESILKNVKIIRTND-DST 85

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V +  +V    +   +     +V   +    N ++S+ +P+G A+ G  VGD +  +  
Sbjct: 86  TVNIGKKVLLHFVEKNKDVEYHVVGTIEADPKNFKISIESPLGRAIKGKEVGDLVQIKSA 145

Query: 113 GGVATHLEVLELE 125
               +++E+  + 
Sbjct: 146 TNKQSNVEIKAIS 158


>UniRef50_D2PP26 Transcription elongation factor GreA n=3 Tax=Actinomycetales
           RepID=D2PP26_9ACTO
          Length = 169

 Score =  107 bits (268), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 29/136 (21%), Positives = 44/136 (32%), Gaps = 13/136 (9%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHDVV 54
           R  I     +A     L E   Y                L   L RA++         VV
Sbjct: 32  RAEITQRISEARDEGDLKENGGYHAAKDEQGKIEARIRQLEDMLRRARV-GETPKDDGVV 90

Query: 55  TMNSRVKFRNLSDGEVRVRTLVYPA----KMTDSNTQLSVMAPVGAALLGLRVGDSIHWE 110
               +V      D +V    L          +      S  +P+GAA++G + GD   +E
Sbjct: 91  EPGMKVSITFAGDDDVETFLLGSRELLALDTSVDIDVYSPQSPLGAAIMGKKKGDKATYE 150

Query: 111 LPGGVATHLEVLELEY 126
            P G    +E++  E 
Sbjct: 151 APNGKDVTVEIVAAEP 166


>UniRef50_Q5P744 Transcription elongation factor n=3 Tax=Proteobacteria
           RepID=Q5P744_AZOSE
          Length = 158

 Score =  107 bits (267), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 47/127 (37%), Positives = 69/127 (54%), Gaps = 9/127 (7%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           M+   +I+ D D  R+  +              L AEL+RA +  P+ +P  VVTM+SRV
Sbjct: 34  MNSEHLILTDNDFVRLMAM---------QPGPQLRAELERAVVVPPDFLPRHVVTMHSRV 84

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
           ++ + + GE R   +VYP +   +  ++SV APVGAALLGL V   I W+ P G    L 
Sbjct: 85  RYLDEASGEQREIQVVYPEEADVAAGKVSVFAPVGAALLGLSVDQVIEWDFPRGPRRRLR 144

Query: 121 VLELEYQ 127
           V E+ +Q
Sbjct: 145 VEEVLHQ 151


>UniRef50_D1CDC6 Transcription elongation factor n=1 Tax=Thermobaculum terrenum ATCC
           BAA-798 RepID=D1CDC6_THET1
          Length = 159

 Score =  107 bits (267), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 33/136 (24%), Positives = 53/136 (38%), Gaps = 14/136 (10%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHD 52
           + R  I     +A+    + E   Y                L   L  A++      P  
Sbjct: 27  VERAKISARIREAKEGGDISESGEYEDAKHSQAFLEGRIKELEKLLANAEVIDRSAQPAG 86

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNT---QLSVMAPVGAALLGLRVGDSIHW 109
            V + S+V      +G     T+V  A+         ++S  + VG+ALLG RVGDS+  
Sbjct: 87  TVGLGSKVTVE--ENGRTYTYTIVDGAEAGRGRDGEVRISSKSAVGSALLGRRVGDSVEV 144

Query: 110 ELPGGVATHLEVLELE 125
           E+P G     ++L +E
Sbjct: 145 EVPAGK-LTFKILSVE 159


>UniRef50_C1ZBG3 Transcription elongation factor n=1 Tax=Planctomyces limnophilus
           DSM 3776 RepID=C1ZBG3_PLALI
          Length = 160

 Score =  106 bits (266), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 28/119 (23%), Positives = 52/119 (43%), Gaps = 11/119 (9%)

Query: 17  DILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDG 68
             L E   Y G            ++L ++L    +     +P  VV   +RV  +N  DG
Sbjct: 40  GDLKENAEYHGQREEQGRLQARINSLKSKLASCYIVDKSTLPKGVVAFGTRVTVKNTDDG 99

Query: 69  EVRVRTLVYPAKMTDSNT--QLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
           ++     V P +    +   ++   +P+ +ALLG +V D +  ++P G   + E+ E+E
Sbjct: 100 DIEKYEFVGPGEEDYMSDVMKILTTSPLASALLGKKVNDKVSIQVPRGTI-NYEITEIE 157


>UniRef50_Q2G8D8 GreA/GreB family elongation factor n=4 Tax=cellular organisms
           RepID=Q2G8D8_NOVAD
          Length = 182

 Score =  106 bits (266), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 33/138 (23%), Positives = 48/138 (34%), Gaps = 12/138 (8%)

Query: 2   SRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEM-PHD 52
            RP I+     A       E   Y                L   +  +++  P       
Sbjct: 48  ERPAIVEIVSWAAGNGDRSENGDYLYGRKRMREIDRELAFLARRMKASRVVDPARQEDRS 107

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V   + V+  +  D   +V TLV   +   S   +   AP+  AL G RVGD     LP
Sbjct: 108 RVLFGATVEIADEDDNR-KVLTLVGDDEQDASKGLIGWSAPIAKALRGSRVGDLRIVRLP 166

Query: 113 GGVATHLEVLELEYQPEA 130
            G     E++ + Y PEA
Sbjct: 167 SG-QKEWEIMAISY-PEA 182


>UniRef50_A4CMB9 Nucleoside diphosphate kinase regulator n=1 Tax=Robiginitalea
           biformata HTCC2501 RepID=A4CMB9_9FLAO
          Length = 139

 Score =  105 bits (264), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 35/132 (26%), Positives = 59/132 (44%), Gaps = 6/132 (4%)

Query: 1   MSRPTIIINDLDAERIDILLE-QPAYAGL---PIADALNAELDRAQMCSPEEMPHDVVTM 56
           M    ++I   +   +   +     Y           L  ELD A++    EM +DVV  
Sbjct: 1   MKYKQLLIEKKEYVLLKRYVNLSAHYHDATLWQSIQKLLTELDSAKIVDEAEMQNDVVRF 60

Query: 57  NSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVA 116
           +S +   + + G  R   LV P +   S  ++S++ P+G AL G   GD++ WE P G  
Sbjct: 61  HSIITVTSEN-GWSRRVQLVLPPERDVSKDKISILTPMGIALFGYAEGDTVSWEFPSG-P 118

Query: 117 THLEVLELEYQP 128
             L + ++E +P
Sbjct: 119 KRLRIEKVEQEP 130


>UniRef50_C6XWY5 Transcription elongation factor GreA/GreB domain protein n=1
           Tax=Pedobacter heparinus DSM 2366 RepID=C6XWY5_PEDHD
          Length = 125

 Score =  105 bits (263), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 40/126 (31%), Positives = 65/126 (51%), Gaps = 2/126 (1%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           M   ++ ++  D + +   LE+   +     + L AEL  A + + EE+P DVV + S  
Sbjct: 1   METKSLSLSKSDFKLLKEHLEKSNMSAYNK-EKLQAELKAATIYTEEELPSDVVCLKSEA 59

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
           +  N+  G+     LV P +      ++SV AP+G AL G R GDSI+WE+P G     +
Sbjct: 60  RIANVKTGKEFTFKLVMPEEANIKAQKVSVFAPIGIALFGYRTGDSINWEMPDG-IQEFK 118

Query: 121 VLELEY 126
           +LE+  
Sbjct: 119 ILEVNR 124


>UniRef50_B1XUH7 Transcription elongation factor GreB n=2 Tax=Polynucleobacter
           necessarius RepID=B1XUH7_POLNS
          Length = 168

 Score =  105 bits (263), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 27/138 (19%), Positives = 50/138 (36%), Gaps = 17/138 (12%)

Query: 5   TIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPE-----EMPH 51
            ++     A       E   Y                LN  L+ A +         E   
Sbjct: 29  EVVKVVHWAASNGDRSENGDYIYGKKRLREIDRRIRFLNKRLEFAIVVDNSARKSGENDA 88

Query: 52  DVVTMNSRVK---FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIH 108
           D V   + V          G+    T+V   ++    + +S ++P+  AL+  R+GD + 
Sbjct: 89  DQVFFGASVTYSALEGPEAGKRTSITIVGVDEVDLDKSHVSWVSPIAKALIKSRIGDCVF 148

Query: 109 WELPGGVATHLEVLELEY 126
            + P G  T +E+L+++Y
Sbjct: 149 IQTPTG-PTEIEILDVQY 165


>UniRef50_Q88ZS9 Transcription elongation factor greA 1 n=7 Tax=Lactobacillus
           RepID=GREA1_LACPL
          Length = 156

 Score =  105 bits (262), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 47/132 (35%), Gaps = 11/132 (8%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHDVV 54
           RP  I     A  +    E   Y+               LN +L  AQ+  P    +D +
Sbjct: 27  RPERIRILAAAAALGDRSENAEYSSAKRDLGRLESRLRYLNKQLQYAQIVQPA--DNDQL 84

Query: 55  TMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGG 114
            +   V    L D +     LV   +      ++S  +P+G AL    V D +    P G
Sbjct: 85  DIGKFVTIEFLDDHDQITYQLVGKQEANLEQQKISFTSPIGQALANHTVDDVVTVNAPNG 144

Query: 115 VATHLEVLELEY 126
               ++V+ ++ 
Sbjct: 145 A-YQVKVIAVKR 155


>UniRef50_B1ZU20 GreA/GreB family elongation factor n=1 Tax=Opitutus terrae PB90-1
           RepID=B1ZU20_OPITP
          Length = 143

 Score =  104 bits (261), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 35/131 (26%), Positives = 59/131 (45%), Gaps = 3/131 (2%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           M+   +  +  D  ++ +L    +  G P    L +EL R  +     +P   + + S V
Sbjct: 1   MNTSPLYFSIEDYTKLSLLATATSRPGTP--SQLRSELSRGVVVDATALPPTAIRLGSTV 58

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
           +  +L  GE+   TLV P +      +LSV+AP+G A++G   G  + W  PGG    L 
Sbjct: 59  EIEDLESGEIETYTLVLPEQANVDARKLSVLAPIGTAVIGCLQGAEVAWSTPGGT-RRLR 117

Query: 121 VLELEYQPEAA 131
           +  +    E A
Sbjct: 118 IGRVSPPAEPA 128


>UniRef50_A7HFE1 GreA/GreB family elongation factor n=1 Tax=Anaeromyxobacter sp.
           Fw109-5 RepID=A7HFE1_ANADF
          Length = 164

 Score =  104 bits (260), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 45/140 (32%), Positives = 70/140 (50%), Gaps = 8/140 (5%)

Query: 5   TIIINDLDAERIDILLEQP--------AYAGLPIADALNAELDRAQMCSPEEMPHDVVTM 56
            +++ + DA R+   L +            G    + L   L  A +  P+ +P +VVTM
Sbjct: 25  RLLLTEQDAARLRATLARASLESMASADARGENAVELLATALRSAIVVPPDRIPAEVVTM 84

Query: 57  NSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVA 116
            SR+   +++ G  R   LVYP +       +SV++PVG ALLGL  G  + W LP G  
Sbjct: 85  RSRLVLEDVASGARREVVLVYPEEERTHEGHVSVLSPVGVALLGLSEGALVGWPLPSGRT 144

Query: 117 THLEVLELEYQPEAAGDYLL 136
             L+V  ++YQPEA  ++ L
Sbjct: 145 AVLQVESVQYQPEAVEEFHL 164


>UniRef50_B9E669 Transcription elongation factor n=5 Tax=Clostridium
           RepID=B9E669_CLOK1
          Length = 157

 Score =  104 bits (259), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 31/131 (23%), Positives = 47/131 (35%), Gaps = 10/131 (7%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHD 52
           + R  I      A     L E   Y+               L  +L  A +     +  D
Sbjct: 27  VKRVEIKAALKAARAQGDLSENADYSAAKEDQSMTETRIQELEYQLKNAVIIESS-LETD 85

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
           V  +N     +     EV   TLV   +    N ++S+ +P+G AL  L+VGD      P
Sbjct: 86  VFDINRTALVKFYDVDEVEEVTLVSSVESDVKNMRISIESPLGKALFRLKVGDKATVISP 145

Query: 113 GGVATHLEVLE 123
            G    +EV +
Sbjct: 146 DG-NYDVEVEK 155


>UniRef50_A0LZA7 Transcription elongation factor n=1 Tax=Gramella forsetii KT0803
           RepID=A0LZA7_GRAFK
          Length = 146

 Score =  104 bits (259), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 36/129 (27%), Positives = 59/129 (45%), Gaps = 6/129 (4%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGL----PIADALNAELDRAQMCSPEEMPHDVVTM 56
           M    +II   + + +  ++    Y            LN EL  A++ +  EMP DV+ +
Sbjct: 1   MRYGELIIEKKEYDFLKQIMSLAKYHKDTSYKASIYKLNEELKDARILTNSEMPLDVIRL 60

Query: 57  NSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVA 116
           NS V          R   +V P K      ++SV+AP+G AL G   GD+I W  P G +
Sbjct: 61  NSLVTIE-TPYAVERTYQIVTPEKGDIRKNKISVLAPMGLALFGYAQGDNITWTFPLGES 119

Query: 117 THLEVLELE 125
             +++ E++
Sbjct: 120 Y-IKIKEVK 127


>UniRef50_A1U1V6 GreA/GreB family elongation factor n=2 Tax=Marinobacter
           RepID=A1U1V6_MARAV
          Length = 128

 Score =  103 bits (258), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 53/125 (42%), Positives = 75/125 (60%), Gaps = 1/125 (0%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFR 63
           P I +++ D  R+  LLE+ A     +AD L  EL RA M    +MP  VVTMNSRV+F 
Sbjct: 5   PHITVSEEDYNRLSTLLERVA-GQSDVADGLEDELSRADMKPLADMPEGVVTMNSRVRFL 63

Query: 64  NLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLE 123
           N   GE     LVYP ++ D++ ++S++AP GAA+LGL +G SI W + G    HL+V+ 
Sbjct: 64  NEDTGEEHEVALVYPHEVGDADHKVSILAPAGAAMLGLSIGSSIEWPMKGRKPIHLKVIG 123

Query: 124 LEYQP 128
           +   P
Sbjct: 124 VTRNP 128


>UniRef50_Q98F06 Nucleoside diphosphate kinase regulator n=2 Tax=Mesorhizobium
           RepID=Q98F06_RHILO
          Length = 140

 Score =  103 bits (258), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 40/128 (31%), Positives = 61/128 (47%), Gaps = 3/128 (2%)

Query: 2   SRP--TIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSR 59
            RP   I+I+D D +R+  L           A+ L  E+DRA +     MP DVV M S 
Sbjct: 7   PRPSSRILISDTDHDRLTGLARALLDRAPETAEELLFEMDRAVVTDAAAMPADVVRMGSA 66

Query: 60  VKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHL 119
           V  R    G  +   LVYP +   +  ++SV+ P+G AL+G  +G ++ W   GG    +
Sbjct: 67  VTVR-GEGGATQRIMLVYPGEADIAENRISVLTPMGTALIGASIGQAVCWSSRGGRELSV 125

Query: 120 EVLELEYQ 127
            V  ++  
Sbjct: 126 TVEAVDTP 133


>UniRef50_C6WVB7 GreA/GreB family elongation factor n=2 Tax=Methylophilaceae
           RepID=C6WVB7_METML
          Length = 168

 Score =  103 bits (258), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 26/103 (25%), Positives = 50/103 (48%), Gaps = 2/103 (1%)

Query: 25  YAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDS 84
                    + A LD A +  P +  H+ V   + ++  +   G      +V   +   S
Sbjct: 67  AEIERDLRYVRARLDSAILVDPTKQSHETVLFGATIEVED-GAGAQHTFHIVGEDEADAS 125

Query: 85  NTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQ 127
             ++S ++P+  +LLG +VGD++ W+ P G   +LE+L++ YQ
Sbjct: 126 INKVSWVSPLAKSLLGQKVGDTVTWQRPAGNI-NLEILDIHYQ 167


>UniRef50_UPI0000E87FB5 transcription elongation factor GreB n=1 Tax=Methylophilales
           bacterium HTCC2181 RepID=UPI0000E87FB5
          Length = 144

 Score =  103 bits (258), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 22/133 (16%), Positives = 43/133 (32%), Gaps = 10/133 (7%)

Query: 3   RPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEE-MPHDV 53
           RP  +     A       E   Y                L   ++ A +  P   +    
Sbjct: 13  RPETVKVISWAAGNGDRSENGDYIYGKKKLRQIDSRIKFLLTAIEDADIVHPSTSIDKKK 72

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           V   + VK  +          +V   ++  +   +S ++P+  AL+G    D I  + P 
Sbjct: 73  VYFGANVKLLDEQSKSTLDIRIVGAHEINHNIGNISWLSPLAKALIGRTSSDLIEVQTPM 132

Query: 114 GVATHLEVLELEY 126
                  +L+++Y
Sbjct: 133 -NIKTYIILKVDY 144


>UniRef50_Q930S2 Putative uncharacterized protein n=1 Tax=Sinorhizobium meliloti
           RepID=Q930S2_RHIME
          Length = 140

 Score =  103 bits (257), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 39/116 (33%), Positives = 57/116 (49%), Gaps = 1/116 (0%)

Query: 12  DAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVR 71
           D   +  L  Q       IA  L  +L+R  +   +++P DVV + S V    + DG  R
Sbjct: 19  DYRLLSRLAYQALSRDFDIAAELIEKLERPCVLPDDQVPPDVVKIGSIVTCE-VEDGPCR 77

Query: 72  VRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQ 127
             +LVYP  +     ++SV+ PVG ALLGLR G ++ W    G   HL V+ +E  
Sbjct: 78  TFSLVYPDDVDAEKGRISVLTPVGVALLGLRPGQAVEWFSRDGQRNHLIVVRVEDD 133


>UniRef50_A9KJU6 GreA/GreB family elongation factor n=8 Tax=Clostridiales
           RepID=A9KJU6_CLOPH
          Length = 167

 Score =  102 bits (256), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 47/130 (36%), Gaps = 9/130 (6%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHDVV 54
           R   I    +A     L E   Y                L   +  A++   +    D +
Sbjct: 25  RKEAIDAVKEARAHGDLSENFEYYAAKKDKNKNEGRIRYLERMIKTAEVIE-DHSSEDEI 83

Query: 55  TMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGG 114
            +N+ V      D E+    L+   +       +S+ +P+G A+LG +V D ++ ++   
Sbjct: 84  GINNTVSIYFEEDNEIEKYKLITTVRENSLQGLISIESPLGKAILGHKVEDRVYVKVRDD 143

Query: 115 VATHLEVLEL 124
              ++ +  +
Sbjct: 144 YGYYVIIKAI 153


>UniRef50_A4F866 Transcription elongation factor greA n=44 Tax=Actinobacteria
           (class) RepID=GREA_SACEN
          Length = 162

 Score =  102 bits (255), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 27/134 (20%), Positives = 44/134 (32%), Gaps = 10/134 (7%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHDV 53
           +RP I     +A     L E   Y                L   L  A++         V
Sbjct: 27  NRPVIAAKINEAREEGDLKENGGYHAAREEQGHLESRIRQLQELLRTAKVGDV-PTEAGV 85

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAK-MTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
               S +  R   + E     L    +         S  +P+G ALL  + G++  +ELP
Sbjct: 86  AKPGSVLTVRYDDEDETEKFLLATREEGAHGDLEVYSPSSPLGQALLDAKEGETREYELP 145

Query: 113 GGVATHLEVLELEY 126
            G    + +++ E 
Sbjct: 146 NGGTMKVTLVKAEP 159


>UniRef50_A4BB58 Nucleoside diphosphate kinase regulator n=1 Tax=Reinekea blandensis
           MED297 RepID=A4BB58_9GAMM
          Length = 142

 Score =  102 bits (254), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 48/128 (37%), Positives = 74/128 (57%), Gaps = 3/128 (2%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
            +P + I++ D +R+  L+           D L +ELDRA +C P E+P D V + S V+
Sbjct: 4   PKPDVFISEHDWQRLQRLVAHYPDHEA--IDWLESELDRATVCLPNELPADAVQLGSVVR 61

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           F+  S G+V +R LV P +    +  +SV++PVG ALLGLRVGD I W    G +T + +
Sbjct: 62  FQLSSSGQVYLRELVLP-EQRQHDEHISVLSPVGMALLGLRVGDEIAWPSSPGQSTTVRI 120

Query: 122 LELEYQPE 129
           L+++   E
Sbjct: 121 LDVKQDRE 128


>UniRef50_B9KZF4 Transcription elongation factor greA n=2 Tax=Thermomicrobia (class)
           RepID=B9KZF4_THERP
          Length = 156

 Score =  102 bits (254), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 33/130 (25%), Positives = 52/130 (40%), Gaps = 11/130 (8%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHDVVT 55
           P ++           + +   Y                +   L RAQM +    P D V 
Sbjct: 30  PLLLERLQQLSNEGDISDNSEYEDTKEELVLTEARIREIEHILRRAQMIT-RAGPQDEVR 88

Query: 56  MNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGV 115
           + SRV   +   G V    +V P +   +  ++S+ +PVGAALLG RVG ++    PGG 
Sbjct: 89  LGSRVTVIDEE-GSVETWVIVSPEEANAAQGRISIESPVGAALLGKRVGTTVTVRAPGGE 147

Query: 116 ATHLEVLELE 125
                +  +E
Sbjct: 148 -MRFTIQRIE 156


>UniRef50_Q9Z7G4 Transcription elongation factor greA n=13 Tax=Chlamydiaceae
           RepID=GREA_CHLPN
          Length = 722

 Score =  101 bits (253), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 22/129 (17%), Positives = 49/129 (37%), Gaps = 14/129 (10%)

Query: 5   TIIINDLDAERIDILLEQPAYAGL--------PIADALNAELDRAQMCSPEEMPHDVVTM 56
                  DA  +  L E   Y                L+ E++RA++ + + +  D V +
Sbjct: 592 DNAKEIEDARSLGDLRENSEYKFALEKRARLQEEIRVLSEEINRARILTKDLVFTDKVGV 651

Query: 57  NSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVA 116
             +V  +    GEV   T++ P      +  LS+ + +   +LG ++ D +  +      
Sbjct: 652 GCKVTLK-GDAGEVVEYTILGPWDADPDSCILSLQSKLAQNMLGKKLNDVVILQG----- 705

Query: 117 THLEVLELE 125
              ++  ++
Sbjct: 706 KEYKISRIQ 714


>UniRef50_Q2GA51 GreA/GreB family elongation factor n=1 Tax=Novosphingobium
           aromaticivorans DSM 12444 RepID=Q2GA51_NOVAD
          Length = 159

 Score =  101 bits (253), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 44/125 (35%), Positives = 69/125 (55%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKF 62
           RP II+ D +A+ +  L    +     I+  L  E+ RAQ+   +++P D V M S V+F
Sbjct: 30  RPQIILIDSEADALADLALAASDRLPEISRMLMEEIGRAQIVPAQDLPPDAVAMRSVVRF 89

Query: 63  RNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVL 122
           R+ + G VR  TLVYPA+   +  ++S++ PVGA L+GLR G SI W    G    + + 
Sbjct: 90  RDEATGAVRTVTLVYPAEADIAQDRVSILTPVGAGLIGLRAGQSIDWPNVRGKQRAITIE 149

Query: 123 ELEYQ 127
           ++   
Sbjct: 150 QVIKP 154


>UniRef50_A6EMP4 Transcription elongation factor n=4 Tax=Bacteroidetes
           RepID=A6EMP4_9BACT
          Length = 139

 Score =  101 bits (253), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 36/129 (27%), Positives = 59/129 (45%), Gaps = 6/129 (4%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIAD----ALNAELDRAQMCSPEEMPHDVVTM 56
           M   ++II   +   +  +L    YA           LN EL  A +   EEMP DV+  
Sbjct: 1   MKYGSVIIEKKEYVFLKRILNISGYAADFEIQKSFKRLNEELKTAIIVDEEEMPTDVIRF 60

Query: 57  NSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVA 116
           NS+V   +  +G  +   +V PA       ++S++  +GAAL G   GD++ WE P G  
Sbjct: 61  NSQV-LISTKNGWKKEFQIVSPALKDVKADKISILTVMGAALFGYAQGDTVEWEFPTGKN 119

Query: 117 THLEVLELE 125
             + + ++ 
Sbjct: 120 L-ITIEKVA 127


>UniRef50_A7HAZ2 GreA/GreB family elongation factor n=5 Tax=Myxococcaceae
           RepID=A7HAZ2_ANADF
          Length = 138

 Score =  101 bits (253), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 50/122 (40%), Positives = 68/122 (55%), Gaps = 3/122 (2%)

Query: 3   RPTIIINDLDAERIDILLE-QPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
           R  I +   D +R+  L++   A      A+ L+AELDRA        P D+VTMN+RV 
Sbjct: 4   RKPIHVTHADLDRLRALVDQHLAGRDARAAEQLDAELDRAVPIEVA--PPDLVTMNARVA 61

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           F +L+ G  R   LVYP     +  ++SV+AP+GAALLGL VG+ I W LP G    L +
Sbjct: 62  FVDLASGVRRELVLVYPRDADVAAGRVSVLAPIGAALLGLSVGEEIDWPLPDGRVARLRI 121

Query: 122 LE 123
           L 
Sbjct: 122 LS 123


>UniRef50_C0A6F4 GreA/GreB family elongation factor n=1 Tax=Opitutaceae bacterium
           TAV2 RepID=C0A6F4_9BACT
          Length = 148

 Score =  101 bits (252), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 64/134 (47%), Gaps = 8/134 (5%)

Query: 2   SRPTIIINDLDA----ERIDILLEQPAYAGLPIADALNAELDRAQMC-SPEEMPHDVVTM 56
            +  I I+  D      R++++ E            L AE DRA +      MP  VVT+
Sbjct: 3   EQQPIYISRADLLQIRARLNLIAE--GRHDRENLARLRAEFDRALIIEDDTAMPDGVVTL 60

Query: 57  NSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVA 116
           +  V+ ++L   E+   TL  P        ++S++AP+G ALLG +V + + WE+PGG  
Sbjct: 61  HCEVRLQDLDTNEIETYTLTLPEHADPEAHRISILAPIGTALLGYQVDNVVTWEMPGGA- 119

Query: 117 THLEVLELEYQPEA 130
             L +LE   QP  
Sbjct: 120 RRLRILEARRQPRP 133


>UniRef50_B2UNZ9 GreA/GreB family elongation factor n=1 Tax=Akkermansia muciniphila
           ATCC BAA-835 RepID=B2UNZ9_AKKM8
          Length = 615

 Score =  101 bits (252), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 42/134 (31%), Gaps = 9/134 (6%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGL--------PIADALNAELDRAQMCSPEEMPHD 52
           +  P  + N   +     L E   Y                L   L  A+          
Sbjct: 479 VKIPENLHNKKISRAEGDLRENGGYQDAKEVEKVLNRRRAELEHALALARGTDFAVTDTS 538

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
              M ++V  + L+ GE  V T++           +S ++ VG  L G  VGD +     
Sbjct: 539 RAAMGTKVTLQPLNGGEPVVYTILGAWDTNPEKHIVSYLSQVGKELTGKSVGDQVKIVPM 598

Query: 113 GGVATH-LEVLELE 125
            G       + ++E
Sbjct: 599 DGDKKKVYTITKIE 612


>UniRef50_Q15Z69 GreA/GreB family elongation factor n=1 Tax=Pseudoalteromonas
           atlantica T6c RepID=Q15Z69_PSEA6
          Length = 128

 Score =  101 bits (252), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 38/124 (30%), Positives = 65/124 (52%), Gaps = 2/124 (1%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
            +P III+  D   ++  LE+          A+  ELDRA + + +++P +VV + S+V 
Sbjct: 3   KQPDIIISTADLAELEYQLERSKLPDDA-IRAIENELDRATIVACKDLPENVVAIGSQVT 61

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           F+ L   +V  + L  P         +SV AP+G+AL+GL  G  I W+   G    +E+
Sbjct: 62  FKILDSQKVFTKALCLPHDSVKFEDSISVFAPIGSALIGLSTGQCIKWQTQRG-QQSVEI 120

Query: 122 LELE 125
           +++E
Sbjct: 121 IKVE 124


>UniRef50_Q1J0L4 Transcription elongation factor n=3 Tax=Deinococcus
           RepID=Q1J0L4_DEIGD
          Length = 156

 Score =  100 bits (251), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 36/134 (26%), Positives = 53/134 (39%), Gaps = 12/134 (8%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHDV 53
            R  I      A     L E  AY                L  +L+RAQ+   +      
Sbjct: 27  RREQISEYMGSAIADGDLRESAAYDEARMQQSENEARILELEDQLERAQIIEEDA--SGG 84

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
             + ++VK R+   G  R   LV   ++     ++S  +P+G AL G R G  +  +LP 
Sbjct: 85  AGLGAKVKVRDEK-GNERQFELVGTYEVDVLKGKISDASPIGQALSGKRPGQIVTVQLPK 143

Query: 114 GVATHLEVLELEYQ 127
           G A   EVLE+ Y 
Sbjct: 144 GSA-KFEVLEVTYD 156


>UniRef50_D1R523 Putative uncharacterized protein n=1 Tax=Parachlamydia
           acanthamoebae str. Hall's coccus RepID=D1R523_9CHLA
          Length = 731

 Score =  100 bits (250), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 45/124 (36%), Gaps = 9/124 (7%)

Query: 5   TIIINDLDAERIDILLEQPAYAGL--------PIADALNAELDRAQMCSPEEMPHDVVTM 56
                   A  +  L E   Y                L+ +L+RA++ + +++  + V++
Sbjct: 604 ENAREIEAARSLGDLRENSEYKFALEKRSRLQGELKRLSEQLNRARIITKDDIYLNQVSV 663

Query: 57  NSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVA 116
            S V+  +     V   T++ P         LS  +    A+LG +VG+   +       
Sbjct: 664 GSIVELEDPEKN-VVTYTILGPWDADADTNILSFQSKFAEAMLGRKVGEEFEFRNQNFTI 722

Query: 117 THLE 120
             ++
Sbjct: 723 RTIK 726


>UniRef50_C7M0F0 GreA/GreB family elongation factor n=1 Tax=Acidimicrobium
           ferrooxidans DSM 10331 RepID=C7M0F0_ACIFD
          Length = 160

 Score =  100 bits (250), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 48/130 (36%), Gaps = 10/130 (7%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHDVV 54
           R  I      A  +  L E   Y                +   L  A++    ++P D V
Sbjct: 26  RIEIAKAIEAARALGDLSENGDYHAAKDAQGKMEARIRQIQQILQSARVV-SADLPTDEV 84

Query: 55  TMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGG 114
                V  R   + +V    +    +       +S  +P+G ALLG RVG  + +E P G
Sbjct: 85  RPGVVVGLRYEGEDDVEHYLVGSIEERHPGLEVVSPTSPLGEALLGARVGAWVEYEAPRG 144

Query: 115 VATHLEVLEL 124
               ++V+E+
Sbjct: 145 T-LKVQVVEI 153


>UniRef50_Q0BZP7 Regulatory protein n=1 Tax=Hyphomonas neptunium ATCC 15444
           RepID=Q0BZP7_HYPNA
          Length = 128

 Score =  100 bits (250), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 45/126 (35%), Positives = 69/126 (54%), Gaps = 2/126 (1%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           ++RP I + D + ER+  L         P AD L  EL RA++ + E++P DVV M+ RV
Sbjct: 4   ITRPPIYVTDAELERLSDLA-HAVQGREPAADMLIEELSRARVTAVEDVPVDVVRMHDRV 62

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
            F           TLVYP +   ++ ++S++  VGA L+GL+VGD++ W    G    +E
Sbjct: 63  NFVY-DGARYEDFTLVYPYEANIADKRISILTQVGAMLIGLQVGDAMQWAGRDGRGHSME 121

Query: 121 VLELEY 126
           VLE+  
Sbjct: 122 VLEVSR 127


>UniRef50_B0T793 GreA/GreB family elongation factor n=1 Tax=Caulobacter sp. K31
           RepID=B0T793_CAUSK
          Length = 141

 Score =  100 bits (249), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 36/122 (29%), Positives = 63/122 (51%), Gaps = 1/122 (0%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKF 62
           +PTI + + D E +  L +            L  E+ RA +  P + P   V + SR+ +
Sbjct: 19  QPTIYVTEQDFEILSNLAD-APAGRAFGGRVLAHEMARALIVEPGQAPLPFVRIGSRIDY 77

Query: 63  RNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVL 122
           R+LS+G+ R   L  P   +  + ++SV++PVGAAL+G+  G + HW    G    ++V+
Sbjct: 78  RDLSNGQTRSVRLSLPRDASIDDNRISVLSPVGAALVGMTAGQAFHWTDAEGRPRGVQVI 137

Query: 123 EL 124
            +
Sbjct: 138 AV 139


>UniRef50_A7HXN2 GreA/GreB family elongation factor n=1 Tax=Parvibaculum
           lavamentivorans DS-1 RepID=A7HXN2_PARL1
          Length = 133

 Score = 99.8 bits (248), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 41/123 (33%), Positives = 65/123 (52%), Gaps = 1/123 (0%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFR 63
           P I++ +   + +  + E        +A  L+ EL+RA++     +P DVV +NS V+F 
Sbjct: 10  PQIVVAEEQFDALSDIAEGLTGVLPHVAGFLDRELNRARLLPLAHVPSDVVKVNSTVEFT 69

Query: 64  NLSDGEV-RVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVL 122
             + GE      L +PA+ T  +  +S+ +PVG ALLGLR G SI W    G    L+VL
Sbjct: 70  LDTRGERVERLKLAFPAESTAGDGYVSIASPVGVALLGLREGQSIEWTSRYGERRSLKVL 129

Query: 123 ELE 125
           ++ 
Sbjct: 130 KVT 132


>UniRef50_A6EIL5 Nucleoside diphosphate kinase regulator protein, putative n=1
           Tax=Pedobacter sp. BAL39 RepID=A6EIL5_9SPHI
          Length = 129

 Score = 99.8 bits (248), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 33/94 (35%), Positives = 54/94 (57%), Gaps = 1/94 (1%)

Query: 34  LNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAP 93
           L+AEL RA + S EE P D + +NS V+ ++ S GE+    +V P        ++SV+ P
Sbjct: 35  LSAELSRAVILSNEEFPSDAIRLNSTVRIQDESTGEIMELIIVLPQHANIKEKKISVLTP 94

Query: 94  VGAALLGLRVGDSIHWELPGGVATHLEVLELEYQ 127
           + AAL+G R GD++ W++P G   +  + E+   
Sbjct: 95  IAAALIGFRQGDAVQWKVPAG-LKNFRITEVAAP 127


>UniRef50_B9XEY1 GreA/GreB family elongation factor n=1 Tax=bacterium Ellin514
           RepID=B9XEY1_9BACT
          Length = 170

 Score = 99.4 bits (247), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 24/97 (24%), Positives = 44/97 (45%), Gaps = 2/97 (2%)

Query: 31  ADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSV 90
              L   L  A++  P   P + V   + V  R+ S  E R   +V   +       +S 
Sbjct: 76  ILQLEQSLATAEIVPPPPQPWEQVRFGATVTVRDESGNETR-YRIVGVDETDIDRDWVSW 134

Query: 91  MAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQ 127
           ++P+  AL+  R+G+ +H+  P G    LE++ + Y+
Sbjct: 135 LSPIARALINARIGERVHFRFPAGE-KQLEIVSITYE 170


>UniRef50_C6X3W9 Transcription elongation factor GreB n=1 Tax=Flavobacteriaceae
           bacterium 3519-10 RepID=C6X3W9_FLAB3
          Length = 183

 Score = 98.7 bits (245), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 42/108 (38%), Gaps = 6/108 (5%)

Query: 24  AYAGL-----PIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYP 78
            Y             LN  +  A++     +    V   + V F+NL++   +   LV  
Sbjct: 77  EYRIAFNHLNARLQLLNGRMASAKIIDTARLSQGEVHFGATVTFKNLNNNLRQTFQLVGV 136

Query: 79  AKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
            +   S  +L+   P+  AL+  +VG+ +  +L        E+L + Y
Sbjct: 137 DEANISKGKLAFTTPLAKALINSKVGEKVTLQLGD-KTNIFEILSIGY 183


>UniRef50_A5FHU8 GreA/GreB family elongation factor n=1 Tax=Flavobacterium
           johnsoniae UW101 RepID=A5FHU8_FLAJ1
          Length = 132

 Score = 98.7 bits (245), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 30/123 (24%), Positives = 61/123 (49%), Gaps = 2/123 (1%)

Query: 3   RPTIIINDLDAERIDILLEQPAYA-GLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
           +PT      D + +  L+ +   +     A+ L+ ELDRA +    E+   V+ +NS V 
Sbjct: 2   KPTPTFCKSDYQFLRELILKSKNSTNTKEANQLSQELDRAVISKESELDSSVIRINSLVT 61

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
             ++   +     +V P+      +++S++AP+  A++G +  D + WELP G    L++
Sbjct: 62  IEDVKANKQMKIQIVLPSYADVKQSKISILAPLSVAIIGFKENDEVDWELPAG-IKTLKI 120

Query: 122 LEL 124
           + +
Sbjct: 121 VAV 123


>UniRef50_C1A2Y4 Transcription elongation factor greA n=41 Tax=Corynebacterineae
           RepID=GREA_RHOE4
          Length = 164

 Score = 98.3 bits (244), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 45/136 (33%), Gaps = 12/136 (8%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHDV 53
           +RP I     +      L E   Y                L   L+ A++         V
Sbjct: 27  NRPVIAAEINERREEGDLKENGGYHAAREEQGQQEARIRQLQELLNSAKV-GEAPTQSGV 85

Query: 54  VTMNSRVK-FRNLSDGEVRVRTLVYPAKM--TDSNTQLSVMAPVGAALLGLRVGDSIHWE 110
               S VK + +  + +     +    +          S  +P+G ALL  +VGD+  + 
Sbjct: 86  ALPGSVVKVYYDGDESDTETFLIATREEGARDAKLEVYSPNSPLGGALLEAKVGDTREYN 145

Query: 111 LPGGVATHLEVLELEY 126
           LP G    + +L  E 
Sbjct: 146 LPNGSTMKVTLLSAEP 161


>UniRef50_Q5QX12 Transcription elongation factor family protein n=1 Tax=Idiomarina
           loihiensis RepID=Q5QX12_IDILO
          Length = 129

 Score = 98.3 bits (244), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 44/125 (35%), Positives = 68/125 (54%), Gaps = 4/125 (3%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPI-ADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           +RP I+I+ +D   I+  L+           D L  EL RA++  P  MP +V  +N +V
Sbjct: 7   TRPNIVISCVDMAVIEHHLD--ETRLPREFLDELEVELARAKIVEPNVMPANVACLNRQV 64

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
            F+ L  G+V  +TL  P ++   +  LSV AP+GAAL+GL VG SI W+   G    +E
Sbjct: 65  TFKVLETGKVFTKTLTAPDQVDKYDDSLSVFAPLGAALIGLSVGQSIQWKTNRG-LQSVE 123

Query: 121 VLELE 125
           ++ + 
Sbjct: 124 IVHVA 128


>UniRef50_Q6MF39 Putative uncharacterized protein n=1 Tax=Candidatus Protochlamydia
           amoebophila UWE25 RepID=Q6MF39_PARUW
          Length = 723

 Score = 97.9 bits (243), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 49/133 (36%), Gaps = 14/133 (10%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYA-GLPIADALNAELD-------RAQMCSPEEMPHD 52
           +           A  +  L E   +         L +EL        RA++ +P+++  D
Sbjct: 592 VEVVENAREIEAARALGDLRENSEFKFAQERRARLQSELKTLSEQFGRARIITPDDILTD 651

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V + S +   +   G+    +++ P         LS+ +    A++G ++GD   ++  
Sbjct: 652 EVGIGSVIDLIDSQ-GQKIRYSILGPWDADPEKNILSLNSKFAQAMIGKKIGDQFQFK-- 708

Query: 113 GGVATHLEVLELE 125
                  +VL L 
Sbjct: 709 ---DETFKVLSLH 718


>UniRef50_B4W8F1 Putative uncharacterized protein n=1 Tax=Brevundimonas sp. BAL3
           RepID=B4W8F1_9CAUL
          Length = 141

 Score = 97.9 bits (243), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 2/132 (1%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
           SRP I ++  D + +  L+         +A  L  EL+RA +C P + P     ++  + 
Sbjct: 12  SRPDIFLSARDHQTLSRLV--GDMPAEGVAGLLQEELERAVICEPGDRPRGAAPLHRWLH 69

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           + +    + R   +V P +      ++SV++ VGA L+GL  G +I W  P G    L  
Sbjct: 70  YVDGRSPQPRRIQIVLPNEADIDAGKVSVLSYVGAGLIGLVEGHTIAWTDPSGADRRLTP 129

Query: 122 LELEYQPEAAGD 133
           + +E      GD
Sbjct: 130 VMIEDPETPGGD 141


>UniRef50_C0JZV3 Transcription elongation factor GreA n=1 Tax=uncultured bacterium
           URE4 RepID=C0JZV3_9BACT
          Length = 112

 Score = 97.9 bits (243), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 20/95 (21%), Positives = 43/95 (45%), Gaps = 1/95 (1%)

Query: 31  ADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSV 90
              L  ++  A++    ++  D V + S+V   N++        +V  ++   S   LS 
Sbjct: 18  IARLKEKVANARVIDESKLSADTVQLLSKVTVENMNAKMKMQFQIVGESEADFSKGLLSA 77

Query: 91  MAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
             P+G AL+G   G+ +  ++P G     ++L++ 
Sbjct: 78  STPIGKALMGHGKGEVVEAKVPSG-IMKFKILDIS 111


>UniRef50_C8S319 GreA/GreB family elongation factor n=1 Tax=Rhodobacter sp. SW2
           RepID=C8S319_9RHOB
          Length = 167

 Score = 97.1 bits (241), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 32/108 (29%), Positives = 47/108 (43%), Gaps = 3/108 (2%)

Query: 24  AYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTD 83
             A       L A L  A    P   P   V   +RV+   L+DG  +V  +    +   
Sbjct: 62  EAAAERDIRYLEARLRSAIPVDPSSQPAGEVAFGARVEVA-LADGSRQVWQITGEDEADA 120

Query: 84  SNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEY-QPEA 130
           +  +++  +P+  ALLG  VGD + W  P G    LEVL + Y  P+A
Sbjct: 121 TQNRIAPQSPLARALLGAEVGDLVIWRKPSG-PVELEVLAIAYADPQA 167


>UniRef50_UPI0001C31C12 transcription elongation factor GreA n=1 Tax=Conexibacter woesei
           DSM 14684 RepID=UPI0001C31C12
          Length = 154

 Score = 97.1 bits (241), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 49/132 (37%), Gaps = 12/132 (9%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHD 52
           ++R  I      A     L E   Y                L      A +        D
Sbjct: 25  VARREIAARIRTAREWGDLKENAEYHAAKEDQAHLETRILKLRERERNATVTEASS-DVD 83

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
           +V   S V+    + G+    TLV  A+ +  + +LS+ +PV  AL+G R G+ +  + P
Sbjct: 84  IVAFGSTVEVE--TGGKNARYTLVGAAEASARDGKLSIESPVARALIGARAGEDVQVQTP 141

Query: 113 GGVATHLEVLEL 124
            G    L V+ +
Sbjct: 142 SGA-RILRVVRV 152


>UniRef50_A1TE43 Transcription elongation factor greA n=11 Tax=Corynebacterineae
           RepID=GREA_MYCVP
          Length = 164

 Score = 97.1 bits (241), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 28/136 (20%), Positives = 48/136 (35%), Gaps = 12/136 (8%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHDV 53
           +RP I     D      L E   Y                L   L+ A++         +
Sbjct: 27  NRPVIAAEINDRREEGDLRENGGYHAAREQQGQEEARIRQLQELLNNAKV-GEAPKQSGI 85

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQL---SVMAPVGAALLGLRVGDSIHWE 110
               S VK     D +     L+   +   S+ +L   S  +P+G AL+  +VG+S  + 
Sbjct: 86  ALPGSVVKVYYDDDEKDTETFLIGTREQGVSDGKLEVYSPNSPLGGALIDAKVGESRSYT 145

Query: 111 LPGGVATHLEVLELEY 126
           +P G    + ++  E 
Sbjct: 146 VPSGNTVKVTLVSAEP 161


>UniRef50_A3HZU2 Transcription elongation factor GreB n=2 Tax=Bacteroidetes
           RepID=A3HZU2_9SPHI
          Length = 166

 Score = 96.0 bits (238), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 44/113 (38%), Gaps = 1/113 (0%)

Query: 14  ERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVR 73
              +      +         L+  +  A++    E P + +   ++V  +     +    
Sbjct: 55  AATEQEKRIASNFISAKIKLLDERIATAKIVDLSEQPKNEIRFGAKVTLKIGKSPKAMTY 114

Query: 74  TLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
            LV   +   S  ++S ++P+   L+G +VG+     L  G     EV+E++Y
Sbjct: 115 QLVGVDEADISKNKISFISPIAMILIGKKVGEKATLSLTKG-DRVFEVMEIKY 166


>UniRef50_B4RBL2 Transcription elongation factor n=1 Tax=Phenylobacterium zucineum
           HLK1 RepID=B4RBL2_PHEZH
          Length = 143

 Score = 95.6 bits (237), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 38/124 (30%), Positives = 55/124 (44%), Gaps = 2/124 (1%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFR 63
           P + + D +   +  ++        P    L  EL RA +      P DVV + S V++ 
Sbjct: 11  PRVTVLDEEYAPLADIVCGSP-RATPGLALLWNELSRATLVQAGRAPADVVRLGSAVEYT 69

Query: 64  NLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLE 123
           +L+  E R   LV P +      +  V   +GAALLGLR GD  HW  P G    L+V  
Sbjct: 70  DLTRRESRRIRLVLPREARPPALE-PVSGTIGAALLGLRPGDVFHWRAPSGELRSLQVDA 128

Query: 124 LEYQ 127
           +E  
Sbjct: 129 VEPP 132


>UniRef50_A6STV7 Transcription elongation factor GreB n=2 Tax=Oxalobacteraceae
           RepID=A6STV7_JANMA
          Length = 175

 Score = 95.2 bits (236), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 52/129 (40%), Gaps = 3/129 (2%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPE-EMPHDVVTMNSR 59
           ++RP  +  D     +    E            L   ++ A++         D +   + 
Sbjct: 47  VARPAAMQMDAADTAMASAQEASLREIEQRIHYLQTRVESAEVVDASVHADGDRIFFGAS 106

Query: 60  VKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHL 119
           V + N + GE    T+V   ++  +  ++S ++P+  +LLG   GD++  + P G    L
Sbjct: 107 VDYEN-TAGETHTATIVGLDELDPAQGRISWLSPLAQSLLGAEEGDTVLLQTPAG-PEEL 164

Query: 120 EVLELEYQP 128
            VL + Y  
Sbjct: 165 HVLTVRYPA 173


>UniRef50_A3PS97 GreA/GreB family elongation factor n=4 Tax=Rhodobacter sphaeroides
           RepID=A3PS97_RHOS1
          Length = 137

 Score = 94.8 bits (235), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 40/130 (30%), Positives = 61/130 (46%), Gaps = 2/130 (1%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
           SRP I +  ++  R+D L          +A  L  +L  A++ +P  +  DVVT+ S V 
Sbjct: 8   SRPAIDMTLIE--RLDTLAGAAIARLPDVAYPLITKLTSARLLAPARLSSDVVTIGSEVL 65

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           + +      R  TL +P     S   +S++ PVG ALLGL  GD   W+   G    L V
Sbjct: 66  YHDDQGARDRRVTLSWPEDADISRRSVSILTPVGVALLGLSAGDRFQWQTRAGERRSLTV 125

Query: 122 LELEYQPEAA 131
           L++  +P   
Sbjct: 126 LQVGSEPRPG 135


>UniRef50_Q4K5S3 Transcription elongation factor GreB n=3 Tax=Pseudomonas
           RepID=Q4K5S3_PSEF5
          Length = 197

 Score = 93.7 bits (232), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 46/112 (41%), Gaps = 4/112 (3%)

Query: 16  IDILLE-QPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRT 74
           +    + Q               L  AQ+ +      D V + SRV F +  D   +   
Sbjct: 88  LGDDADKQRMAELERDLRYFTQRLHSAQVVTTAN-STDKVQIGSRVTFADEQD-RQQSVQ 145

Query: 75  LVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
           LV   +   +   ++  +P+G ALLG + GD + W+ P G    +E++ +E 
Sbjct: 146 LVGEDQADAAKGLINWASPLGRALLGAQPGDEVLWQRPAGNQL-IEIIRIEP 196


>UniRef50_Q1CX76 Transcription elongation factor, GreA/GreB family n=2
           Tax=Cystobacterineae RepID=Q1CX76_MYXXD
          Length = 167

 Score = 93.3 bits (231), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 24/95 (25%), Positives = 41/95 (43%), Gaps = 2/95 (2%)

Query: 32  DALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVM 91
             L A L+  ++  P+      V   + V+  +   G      +V P +      +LSV 
Sbjct: 72  QELAAVLEDVRVVEPDASQAGRVFFGAWVELEDEDGG-PVRYRIVGPDESDVKAGRLSVE 130

Query: 92  APVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
           +P+  ALLG  VG+S+  + P G      V  ++Y
Sbjct: 131 SPLARALLGKEVGESVVVDRPRG-PVEYTVTAVDY 164


>UniRef50_D2KXD7 Transcription elongation factor n=1 Tax=Lactobacillus fermentum
           RepID=D2KXD7_LACFE
          Length = 303

 Score = 92.5 bits (229), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 39/111 (35%), Gaps = 13/111 (11%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHDV 53
            RPT+I     A  +  L E   Y+               L+ +L  A++          
Sbjct: 38  KRPTLIARLKAARVLGDLSENTEYSTAKRELRHLESCLRYLDKQLTYAKVIDVS--DDGK 95

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVY---PAKMTDSNTQLSVMAPVGAALLGL 101
           V +   V  R L D E     +V      + + +   L+  +P+G AL G 
Sbjct: 96  VALGKVVTIRFLDDQEEATYQIVGRYQAEQASLTEEVLAFDSPLGLALKGK 146


>UniRef50_C5BTE2 Transcription elongation factor GreA n=1 Tax=Teredinibacter
           turnerae T7901 RepID=C5BTE2_TERTT
          Length = 126

 Score = 92.5 bits (229), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 20/117 (17%), Positives = 39/117 (33%), Gaps = 3/117 (2%)

Query: 8   INDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSD 67
           +       ++      +      A  L   L  A +   +++    V   S V   ++ +
Sbjct: 9   MTARWRRELEA---NLSSLPDTDAAELRTRLASATVVDNDDIMGGRVQFGSLVTVFSIDE 65

Query: 68  GEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
            E +   +V   +       L   +P+  AL G R G+ +   L  G     EV  +
Sbjct: 66  EEEQSFQIVSSDESLSGRGLLDQRSPLAQALFGAREGEVVRVLLQNGSNCDYEVTHI 122


>UniRef50_B8DTJ6 Transcription elongation factor GreA n=15 Tax=Bifidobacteriaceae
           RepID=B8DTJ6_BIFA0
          Length = 160

 Score = 92.1 bits (228), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 42/130 (32%), Gaps = 13/130 (10%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHDVV 54
           R  I      A     L E   Y              + L  +L  A++          V
Sbjct: 30  RDEITERIAAARAEGDLSENGGYQAAREEQSKNEGRINELIVKLRNAKIIE--APKAGEV 87

Query: 55  TMNSRVKFRNLSDGEVRVRTLVYPAKMTDSN-TQLSVMAPVGAALLGLRVGDSIHWELPG 113
              S V       G      +        ++   +S  +P+G A++G +VGD + ++ P 
Sbjct: 88  GNGSLVTIEL--GGNEMQYVIGSRDITVATDYDVISPESPIGGAIIGHKVGDVVTYKAPN 145

Query: 114 GVATHLEVLE 123
           G    + + E
Sbjct: 146 GREISVTIKE 155


>UniRef50_Q848L1 GreA n=1 Tax=uncultured bacterium RepID=Q848L1_9BACT
          Length = 597

 Score = 92.1 bits (228), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 39/111 (35%), Gaps = 3/111 (2%)

Query: 18  ILLEQPA-YAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLV 76
            L E+            ++A L  A +      P D V   + V   +   G      LV
Sbjct: 489 DLPERSELATLERELAQVSAVLQGAIVIRLASPPRDEVRFGAEVVVED-DRGSRSRFQLV 547

Query: 77  YPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQ 127
              +       ++  +P+G AL G R+G  + W  P G      V E+ Y 
Sbjct: 548 GENEAAPERGLVNWFSPLGRALAGARLGQRVEWTTPAGRG-AYVVREISYP 597


>UniRef50_B2GLP4 Transcription elongation factor n=3 Tax=Actinomycetales
           RepID=B2GLP4_KOCRD
          Length = 165

 Score = 91.7 bits (227), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 46/135 (34%), Gaps = 18/135 (13%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHDVV 54
           R  I+     A     L E   Y                L   L+ AQ+         V+
Sbjct: 29  RQEIVDRIEQARSEGDLKENGGYHAAREEQGKNEGRIVQLTQLLENAQV-GEAPADDGVI 87

Query: 55  TMNSRVKFRNLSDGEVRVRTLVYPAK------MTDSNTQLSVMAPVGAALLGLRVGDSIH 108
                V       G+     L+   +        +     S  +P+GAA+ G +VG+++ 
Sbjct: 88  EAGMVVTAEI--AGDEMTF-LMGSREVAEDLTGGEDLEVFSERSPMGAAINGHKVGETVS 144

Query: 109 WELPGGVATHLEVLE 123
           ++ P G    +++L+
Sbjct: 145 YQAPNGKDITVKILK 159


>UniRef50_A0JU41 GreA/GreB family elongation factor n=21 Tax=Actinomycetales
           RepID=A0JU41_ARTS2
          Length = 164

 Score = 91.3 bits (226), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 40/130 (30%), Gaps = 12/130 (9%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHDVV 54
           R  I+     A +   L E   Y                L   L  A +         +V
Sbjct: 32  RAEIVQKIEAARQEGDLKENGGYHAAKEEQGKIEARIRQLTVLLRDAHV-GESPADDGIV 90

Query: 55  TMNSRVKFRNLSDGEVRVRTLVYPAKM-TDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
                V  R    G+     L              S  +P+G+A++G + GD + +  P 
Sbjct: 91  EPGMIVVARI--AGDEETFLLGSREIAGDSDLDVFSEKSPLGSAIVGHKEGDKLSYTAPN 148

Query: 114 GVATHLEVLE 123
           G    +E+L 
Sbjct: 149 GKDITVEILS 158


>UniRef50_D2NP88 Transcription elongation factor n=2 Tax=Rothia mucilaginosa
           RepID=D2NP88_9MICC
          Length = 189

 Score = 91.0 bits (225), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 23/135 (17%), Positives = 40/135 (29%), Gaps = 18/135 (13%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHDVV 54
           R  I+     A     L E   Y                L   L+ A +         VV
Sbjct: 53  RQEIVDRIAQARDEGDLRENGGYHAARDEQAKNEARIKQLKHLLETAHIGD-TPADDGVV 111

Query: 55  TMNSRVKFRNLSDGEVRVRTLVYPAK------MTDSNTQLSVMAPVGAALLGLRVGDSIH 108
                ++      G      L+   +              S  +P+GAA++G + GD + 
Sbjct: 112 EHGMVIEAEV--AGRTLKF-LLGSREIEDTLPAGSDLKVFSEKSPLGAAIMGAKQGDEVT 168

Query: 109 WELPGGVATHLEVLE 123
           +  P G     +++ 
Sbjct: 169 YTAPNGKELSAKIIS 183


>UniRef50_B4UMG4 GreA/GreB family elongation factor n=4 Tax=Anaeromyxobacter
           RepID=B4UMG4_ANASK
          Length = 169

 Score = 91.0 bits (225), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 33/120 (27%), Positives = 43/120 (35%), Gaps = 3/120 (2%)

Query: 12  DAERIDI-LLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEV 70
           DA R+                 AL+A L    +  PE  P   V   + V      DG  
Sbjct: 52  DAARLPDAERPARLGELDARIAALDATLGALTVLGPEATPEGQVGFGTWVTVE-EEDGRR 110

Query: 71  RVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQPEA 130
               LV P +       +S  +PV  ALLG R GD +    PGG A  L V+ +      
Sbjct: 111 VTWRLVGPDEADARRGLISAGSPVARALLGRRAGDVVEVNRPGGEA-ELTVVAVRRTAPP 169


>UniRef50_A6DK30 Putative uncharacterized protein n=1 Tax=Lentisphaera araneosa
           HTCC2155 RepID=A6DK30_9BACT
          Length = 693

 Score = 91.0 bits (225), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 45/134 (33%), Gaps = 15/134 (11%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMP-HD 52
             P        A     L E   +                L+A L++       E    +
Sbjct: 555 EIPDNSKAIAAAREHGDLRENFEFRAAKDRQKYLQLRVGELDAMLNKIGPTDFSEFKVKN 614

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            V   ++V  ++         ++V           LS   P+  ++LG +VGDSI   LP
Sbjct: 615 RVIPAAKVTIKSPEA--ETTYSIVGMLDGDPDKNWLSFETPLAKSMLGHQVGDSIE--LP 670

Query: 113 GGVATHLEVLELEY 126
           GG     E+L +E 
Sbjct: 671 GGD--EAEILAVEP 682


>UniRef50_D2QK34 GreA/GreB family elongation factor n=1 Tax=Spirosoma linguale DSM
           74 RepID=D2QK34_9SPHI
          Length = 171

 Score = 90.6 bits (224), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 2/97 (2%)

Query: 31  ADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGE-VRVRTLVYPAKMTDSNTQLS 89
             ALN  +  A++ + ++ P D V   + V   + S G+  +  T+V   +    + +++
Sbjct: 74  IAALNQRIATAKVVNMQDHPLDEVRFGATVTLSSQSTGKADQQLTIVGVDEADAIHGRIA 133

Query: 90  VMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
             AP+   LLG +VGD I    P G    LE+  + Y
Sbjct: 134 FPAPIARLLLGKKVGDFITLRTPRGEN-ALEITSIYY 169


>UniRef50_C4RPW8 Transcription elongation factor n=1 Tax=Micromonospora sp. ATCC
           39149 RepID=C4RPW8_9ACTO
          Length = 166

 Score = 90.6 bits (224), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 46/137 (33%), Gaps = 14/137 (10%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHDV 53
           +RP I            L E   Y                L   L  AQ+   E    D 
Sbjct: 31  NRPAIAAEINARREEGDLRENGGYHAAREEQGKQEGRILYLKELLRTAQV--GEAPSADT 88

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNT--QLSVMAPVGAALLGLRVGDSIHWEL 111
           V+    V      D +     L+   +++ +      S  + +G ++LG R G ++ +  
Sbjct: 89  VSPGMVVTIYFDDDTDDTETFLLGSREISSTTELTVYSPESALGKSILGTRPGQTVTYTA 148

Query: 112 PGGVATHLEVLELEYQP 128
           P G    + V  + ++P
Sbjct: 149 PSGADIKVTV--VRFEP 163


>UniRef50_B4D5K0 GreA/GreB family elongation factor n=1 Tax=Chthoniobacter flavus
           Ellin428 RepID=B4D5K0_9BACT
          Length = 169

 Score = 90.2 bits (223), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 44/111 (39%), Gaps = 2/111 (1%)

Query: 17  DILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLV 76
             +             AL+  L  A++ +  E   D V     V  R+ + G      +V
Sbjct: 60  GEISRDELRRVTSRMQALSQRLADAEVIAISESRGDEVRFGMFVTIRD-AGGVEDEYRIV 118

Query: 77  YPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQ 127
              ++      +S ++P+  A++G ++GD + ++ P G    L ++ +   
Sbjct: 119 GVDEVDLEAGWISWLSPLAQAIVGRKIGDVVQFQAPAGE-KKLHIVAVRPP 168


>UniRef50_A0M1N1 GreA-like transcription elongation factor n=3 Tax=Flavobacteriaceae
           RepID=A0M1N1_GRAFK
          Length = 166

 Score = 90.2 bits (223), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 57/125 (45%), Gaps = 7/125 (5%)

Query: 8   INDLDAERIDILLEQ------PAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
           + DL+ ER  +  E                + L+  L  A++   ++ P D +   +RVK
Sbjct: 43  LKDLEYERAHVEAENDTEKRRAQSLIDGKINLLSERLQTARLLDSKDQPKDEIRFGARVK 102

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
             N + G+++   +V   +      +++ +AP+  A+ G +VG+ I ++L       L+V
Sbjct: 103 LTNETSGQLQEFQIVGVDEADIKKKKIAFVAPIAKAVTGRKVGEEIDFKLGN-EIRKLKV 161

Query: 122 LELEY 126
           L + Y
Sbjct: 162 LGITY 166


>UniRef50_C1ABM5 Transcription elongation factor GreA n=1 Tax=Gemmatimonas
           aurantiaca T-27 RepID=C1ABM5_GEMAT
          Length = 161

 Score = 89.8 bits (222), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 44/123 (35%), Gaps = 9/123 (7%)

Query: 9   NDLDAERIDILLEQPAYAGL--------PIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
               A  +  L E   Y                L   + +       ++P D V + S+V
Sbjct: 27  EIRKAVELGDLKENSEYKAALERQQFVQARLGQLTQRVTKLANIDITQIPGDRVGLGSKV 86

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
              +L         LV+       +  +++ +P+G AL G  VG+    +LP      L+
Sbjct: 87  IVEDLQSKARETYELVFGDAGELHDGHVTMGSPIGRALQGKSVGEEAILKLPT-RIRKLQ 145

Query: 121 VLE 123
           ++E
Sbjct: 146 IVE 148


>UniRef50_A6SZ83 Transcription elongation factor, greA family n=2
           Tax=Oxalobacteraceae RepID=A6SZ83_JANMA
          Length = 139

 Score = 89.4 bits (221), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 27/135 (20%), Positives = 51/135 (37%), Gaps = 3/135 (2%)

Query: 5   TIIINDLDAERIDILLEQPAYAGLPIA---DALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
              +   DA  +  + E     G       + L   +  + +   +      VT+ S V 
Sbjct: 4   ERYLTQNDAATLSRIAEHLLRMGEVEINAGEQLIDIISTSIILPVDVQRKGYVTLYSTVS 63

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           +  +   EVR  T+V P         +S + P+G AL+G +   ++   LP      L++
Sbjct: 64  YSPVDTEEVRKLTIVCPQDANPQLALISALTPIGLALIGRKALTTVEVALPSKRVEKLKI 123

Query: 122 LELEYQPEAAGDYLL 136
           L++       G+  L
Sbjct: 124 LDVTPLDSTMGELAL 138


>UniRef50_C7CFG6 Putative regulator n=1 Tax=Methylobacterium extorquens DM4
           RepID=C7CFG6_METED
          Length = 149

 Score = 89.0 bits (220), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 42/122 (34%), Positives = 62/122 (50%), Gaps = 1/122 (0%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFR 63
           P I +   D +R+          G   AD L  EL RA +C P  +P +VV++N RV +R
Sbjct: 8   PPITVTTRDFDRLVAFSLDAHLRGDSHADFLLWELKRATLCPPCALPSEVVSVNCRVLYR 67

Query: 64  NLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHW-ELPGGVATHLEVL 122
              +  VRV  L +P  + +    LSV +P+G ALLGLRVGD + + +   G    + V 
Sbjct: 68  LDDEPGVRVHLLAHPDDLINLADGLSVASPLGTALLGLRVGDRMPFCDNRLGTQHVVTVE 127

Query: 123 EL 124
            +
Sbjct: 128 GI 129


>UniRef50_A6X2G5 GreA/GreB family elongation factor n=2 Tax=Ochrobactrum
           RepID=A6X2G5_OCHA4
          Length = 156

 Score = 88.6 bits (219), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 28/118 (23%), Positives = 43/118 (36%), Gaps = 3/118 (2%)

Query: 5   TIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRN 64
            +     DA                         + A++  P     DVV     V+  N
Sbjct: 42  RLQRELADANVAGERS--AIARISRDLRYWTTRRENAELSVPVP-DSDVVRFGMTVELEN 98

Query: 65  LSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVL 122
           L DG+VR  T+V   +   SN ++S +APV   L G  VGD +           L+++
Sbjct: 99  LDDGKVRRWTIVGEDEADPSNGKISHVAPVAILLFGKPVGDVVKINNVEWEIVSLKIV 156


>UniRef50_B1ZQE9 GreA/GreB family elongation factor n=1 Tax=Opitutus terrae PB90-1
           RepID=B1ZQE9_OPITP
          Length = 166

 Score = 87.9 bits (217), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 25/100 (25%), Positives = 40/100 (40%), Gaps = 2/100 (2%)

Query: 26  AGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSN 85
                A  L   L  A++ S       +V   ++V  +   DG      +V   +     
Sbjct: 69  KLDERARELQQILATAEIISSPAPDRSIVRFGAKVTVK-EEDGTTSTYRIVGIDETEFYT 127

Query: 86  TQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
             +S  +P+  ALLG  VGD I ++ P G    LE+  +E
Sbjct: 128 GGISFQSPLAQALLGASVGDRIQFQSPAG-PRQLEIQLIE 166


>UniRef50_Q98F07 Nucleoside diphosphate kinase regulator; Rnk n=2 Tax=Mesorhizobium
           RepID=Q98F07_RHILO
          Length = 180

 Score = 87.9 bits (217), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 38/132 (28%), Positives = 60/132 (45%), Gaps = 1/132 (0%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV 60
           M      +   D   ++++LE+      PI   L  +L  A +   + +  D+VT+NSRV
Sbjct: 1   MKSTNCCLTTKDRAVLEVMLERRRAFADPIVHVLEHKLSSADVVPIDTVGPDIVTLNSRV 60

Query: 61  KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
            F ++  G  + RTLV         + LSV    G  +LG+  G +   E   G    + 
Sbjct: 61  VF-SIDAGHAQTRTLVQNEVRGPVGSSLSVATRRGLCMLGMAQGQTASIEHADGRRESIL 119

Query: 121 VLELEYQPEAAG 132
           +  + YQPEAAG
Sbjct: 120 IKAVLYQPEAAG 131


>UniRef50_Q97HP4 Transcription elongation factor n=1 Tax=Clostridium acetobutylicum
           RepID=Q97HP4_CLOAB
          Length = 158

 Score = 87.9 bits (217), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 43/126 (34%), Gaps = 13/126 (10%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGL--------PIADALNAELDRAQMCSPEEMPHD 52
           + R  I    ++A       E   Y                ++  L  A +   +++  D
Sbjct: 23  VKRHEIAKKKMEAAAFGDRSENAEYKAAKEEYYHNNRRLGQISRLLKNAIIVEEDKID-D 81

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKM---TDSNTQLSVMAPVGAALLGLRVGDSIHW 109
            V + S +  + +   E     LV    +    +    +SV +P G AL    VGDSI  
Sbjct: 82  EVNIGSEMLLK-IGADETFKAKLVTTLNISVEDEDIEYISVDSPFGKALYKKHVGDSIDV 140

Query: 110 ELPGGV 115
            LP   
Sbjct: 141 NLPDNR 146


>UniRef50_Q83FN6 Transcription elongation factor n=3 Tax=Micrococcineae
           RepID=Q83FN6_TROWT
          Length = 172

 Score = 87.5 bits (216), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 42/132 (31%), Gaps = 12/132 (9%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHDVV 54
           R  I      A     L E   Y+               L   L  A++         VV
Sbjct: 39  RKEIAKRIEQARSEGDLRENGGYSAAKEEQARIEGRIQQLQDLLRHARV-GQAPKARGVV 97

Query: 55  TMNSRVKFRNLSDGEVRVRTLVYPAKMTDSN-TQLSVMAPVGAALLGLRVGDSIHWELPG 113
                V  R    G  R   L        S+    S  + +G A+LGL+ G  I  + P 
Sbjct: 98  EPGVVVTARI--GGSERRFLLGNREIAHTSSLATYSESSAIGQAILGLKEGSEIECKSPT 155

Query: 114 GVATHLEVLELE 125
           G    + +L++E
Sbjct: 156 GALIKVAILKVE 167


>UniRef50_B9KMW2 Transcription elongation factor n=3 Tax=Rhodobacter sphaeroides
           RepID=B9KMW2_RHOSK
          Length = 164

 Score = 87.5 bits (216), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 43/120 (35%), Gaps = 3/120 (2%)

Query: 9   NDLDAERIDILLEQP-AYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSD 67
                   +  L++    A       L A +  A +  P   P D V     V   +   
Sbjct: 46  RLRALRAREDRLDRLPEAAAERDIRYLEARIASAILVDPAAQPLDEVAFGLAVTVEDE-A 104

Query: 68  GEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQ 127
           G   V  +    +   +  +++  AP+  AL+G R+G+ + W  P G    L V  + + 
Sbjct: 105 GRRTVWEITGEDEAQATARRIAPQAPLARALMGARLGEKVVWTRPAGEV-TLTVTGIAHP 163


>UniRef50_B1I1G7 GreA/GreB family elongation factor n=1 Tax=Candidatus Desulforudis
           audaxviator MP104C RepID=B1I1G7_DESAP
          Length = 154

 Score = 87.5 bits (216), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 20/102 (19%), Positives = 42/102 (41%), Gaps = 1/102 (0%)

Query: 27  GLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNT 86
                + +   L RA++   +  P  +  +   ++  +L  G   +  +V P ++  +  
Sbjct: 53  LDDYLNRVRELLARARVVEGQCPPLPLTLIGCDIRVEDLDRGHSEMFRVVSPYEINPAAG 112

Query: 87  QLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQP 128
            +S ++PVG  LL    G  +  + PGG      V+ + Y  
Sbjct: 113 HVSFLSPVGRGLLLKEPGQVLAVQAPGGTFR-YRVVSVTYPA 153


>UniRef50_Q0PQI1 Transcription elongation factor (Fragment) n=1 Tax=Endoriftia
           persephone 'Hot96_1+Hot96_2' RepID=Q0PQI1_9GAMM
          Length = 166

 Score = 87.1 bits (215), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 14/103 (13%), Positives = 28/103 (27%), Gaps = 9/103 (8%)

Query: 2   SRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMPHDV 53
            R  ++     A       E   Y                L   +   ++          
Sbjct: 57  RRREVVKALSAAAAEGDRSENAEYIYRKKELREIDRRIRYLQKRIPELKVVEQPPSNRQQ 116

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGA 96
           V   + V   +   G      +V P ++      +S+ +P+GA
Sbjct: 117 VFFAAWVTLEDEQ-GVTHRYRIVGPDEIDHQADYISMDSPLGA 158


>UniRef50_B8IHN9 GreA/GreB family elongation factor n=1 Tax=Methylobacterium
           nodulans ORS 2060 RepID=B8IHN9_METNO
          Length = 147

 Score = 87.1 bits (215), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/122 (30%), Positives = 63/122 (51%), Gaps = 1/122 (0%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFR 63
           P I I++ D +R+ +        G      L +EL+RA +C   E+P  VV+ N RV +R
Sbjct: 8   PPITISNYDFDRLVVYGLTAYMHGDRNVVFLFSELERATVCPAMELPDQVVSANCRVIYR 67

Query: 64  NLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHW-ELPGGVATHLEVL 122
              +  +R   LV+P  +   + ++S  +P+G ALLGL+VGD + + +   G    + V 
Sbjct: 68  IDDEPCLRAHMLVHPCDLISPDDEISAGSPLGIALLGLKVGDRMPFCDTQTGGRHVVAVE 127

Query: 123 EL 124
            +
Sbjct: 128 GV 129


>UniRef50_C6B1R3 GreA/GreB family elongation factor n=16 Tax=cellular organisms
           RepID=C6B1R3_RHILS
          Length = 160

 Score = 86.3 bits (213), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 31/120 (25%), Positives = 46/120 (38%), Gaps = 10/120 (8%)

Query: 9   NDLDAER-IDILLEQPAYAGL--PIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNL 65
              DA   I+ + E+   A         L A L  AQ+  P     D V   S V FR  
Sbjct: 48  EAYDAASPIEDVNERRRQAASPLRDLRYLTARLRTAQLM-PSPTSIDTVAFGSTVTFR-R 105

Query: 66  SDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
            DG V+   +V   +       +S ++PV   L+G  VGD +           LE++ + 
Sbjct: 106 DDGRVQTYRIVGEDEADPKAGSISYVSPVARLLMGKAVGDMVET-----GGQELEIIAIA 160


>UniRef50_A1A150 Transcription elongation factor GreA n=6 Tax=Bifidobacterium
           RepID=A1A150_BIFAA
          Length = 159

 Score = 86.3 bits (213), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 44/130 (33%), Gaps = 13/130 (10%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHDVV 54
           R  I+     A     L E   Y              D L  +L  A++          V
Sbjct: 29  RDEILSKVSAARAEGDLSENGGYQAAREAQRVNQGRIDELTVKLRNAKIL--TAPKAGEV 86

Query: 55  TMNSRVKFRNLSDGEVRVRTLVYPAKMTDSN-TQLSVMAPVGAALLGLRVGDSIHWELPG 113
              S V      +G   V  L        ++ + +S  +P+GAA+ G   GD++ +  P 
Sbjct: 87  GDGSLVTLEV--NGREMVYVLGTRDLSIATDYSIISPESPIGAAINGAHAGDTVTYTAPN 144

Query: 114 GVATHLEVLE 123
           G    + + E
Sbjct: 145 GREISVTIKE 154


>UniRef50_B9J7D6 Transcription elongation factor protein n=52
           Tax=Alphaproteobacteria RepID=B9J7D6_AGRRK
          Length = 160

 Score = 86.0 bits (212), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 23/97 (23%), Positives = 36/97 (37%), Gaps = 7/97 (7%)

Query: 29  PIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQL 88
                L   +  AQ   P     D+V   S V F +  DG V+   +V   +       +
Sbjct: 71  RDLRYLAERIRTAQPI-PAPASIDIVAFGSTVTF-SRDDGRVQTYRIVGEDEADPKTGSI 128

Query: 89  SVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
           S ++PV   L+G  VGD             LE++ + 
Sbjct: 129 SFVSPVAKLLMGKSVGDVASV-----GDQELEIIAIA 160


>UniRef50_A5FHJ3 GreA/GreB family elongation factor n=3 Tax=Flavobacteriaceae
           RepID=A5FHJ3_FLAJ1
          Length = 143

 Score = 85.6 bits (211), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 27/87 (31%), Positives = 49/87 (56%), Gaps = 1/87 (1%)

Query: 39  DRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAAL 98
             A     + +P DVV++N +V +++ +  + +   LV P K+  S  ++SV++  G A+
Sbjct: 55  KHATQVLRKNLPEDVVSVNRKVTYKDHNTNQEKTILLVGPEKVKVSKNKISVLSDEGIAM 114

Query: 99  LGLRVGDSIHWELPGGVATHLEVLELE 125
           +G +VGD I W    G    LE+L++E
Sbjct: 115 VGYKVGDLIEWPAKKGH-LKLEILKVE 140


>UniRef50_A5D4X0 Putative uncharacterized protein n=1 Tax=Pelotomaculum
           thermopropionicum SI RepID=A5D4X0_PELTS
          Length = 150

 Score = 85.6 bits (211), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 28/118 (23%), Positives = 49/118 (41%), Gaps = 8/118 (6%)

Query: 8   INDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSD 67
               +    + L+E            L+  +  A      +     VT+ S V+ +NLS+
Sbjct: 35  KPSKERNEFENLIEN-------YIQRLDRLIRNASKSKIADNKVPFVTIGSEVEIQNLSE 87

Query: 68  GEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
            EV    +V P         +S ++PVG +LL  +VGD +  + PGGV    ++  + 
Sbjct: 88  QEVYKYFIVNPFYSEVREGHISFLSPVGKSLLLKKVGDEVEVKAPGGVFR-YKIKSIR 144


>UniRef50_B4RDE4 Transcription elongation factor GreA/GreB, family n=1
           Tax=Phenylobacterium zucineum HLK1 RepID=B4RDE4_PHEZH
          Length = 161

 Score = 85.6 bits (211), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 43/122 (35%), Gaps = 3/122 (2%)

Query: 5   TIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRN 64
              + DLD        E              A    AQ+        D V   +RV FR 
Sbjct: 38  ERALADLDQRIAGCEDEAQMAWLRRDQRYWAARRANAQVVE-SPADPDEVAFGTRVTFR- 95

Query: 65  LSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
              G      LV   +   +  +LS +AP+  A++G   G+++  E        LE+L +
Sbjct: 96  KDGGAPETVELVGEDEAEPAQGRLSWVAPLARAMIGAMPGETVELETRTPAIR-LEILAV 154

Query: 125 EY 126
           E 
Sbjct: 155 EP 156


>UniRef50_Q5SJG6 Anti-cleavage anti-GreA transcription factor Gfh1 n=6
           Tax=Thermaceae RepID=Q5SJG6_THET8
          Length = 156

 Score = 85.2 bits (210), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 29/124 (23%), Positives = 53/124 (42%), Gaps = 6/124 (4%)

Query: 5   TIIINDLDAERIDILLEQPA-YAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFR 63
            ++ +  D +   +   +          D+L   L RA +        +V+ + S V+  
Sbjct: 35  ELMESSDDYDDSGLEAAKQEKARIEARIDSLEDILSRAVILEEG--SGEVIGLGSVVELE 92

Query: 64  NLSDGEVRVRTLVYPAKMTDSNT--QLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           +   GE     +V PA+    +T  ++S  +P+G ALLG RVGD +  + P G      V
Sbjct: 93  DPLSGERLSVQVVSPAEANVLDTPMKISDASPMGKALLGHRVGDVLSLDTPKGR-REFRV 151

Query: 122 LELE 125
           + + 
Sbjct: 152 VAIH 155


>UniRef50_C4L6P4 GreA/GreB family elongation factor n=1 Tax=Exiguobacterium sp. AT1b
           RepID=C4L6P4_EXISA
          Length = 152

 Score = 85.2 bits (210), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 34/133 (25%), Positives = 50/133 (37%), Gaps = 11/133 (8%)

Query: 2   SRPTIIINDLDAERIDILLEQPAY--------AGLPIADALNAELDRAQMCSPEEMPHDV 53
            R         A +     E   Y                LN  LD A +     +  +V
Sbjct: 23  ERTDARERLRTARKFCDFREDVTYTEAVRQYERIEADILELNHLLDDATIVES--VQSEV 80

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
           VT  +RV  R +   E     +V  A+       +SV +P+G  L+G  +G +I  E PG
Sbjct: 81  VTFGNRVVIREVQQEETERYRIVSEAEADLERGSISVTSPLGRRLMGATMGQTIQVETPG 140

Query: 114 GVATHLEVLELEY 126
           G    +EVL +E 
Sbjct: 141 GTIQ-VEVLHIEP 152


>UniRef50_Q88Q22 Transcription elongation factor, putative n=11 Tax=Pseudomonas
           RepID=Q88Q22_PSEPK
          Length = 165

 Score = 83.6 bits (206), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 3/100 (3%)

Query: 25  YAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDS 84
                     +A +  AQ+  P    H  V + SRV+F +  D + +V  LV   +    
Sbjct: 65  ADTERDLRYFSARVQSAQVV-PAATSHSKVQIGSRVRFVDAQD-QEQVVQLVGEDEADAG 122

Query: 85  NTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
           +  ++  +P+G ALLG   GD + W  P G    +EV+E+
Sbjct: 123 HGLINWGSPLGRALLGAGPGDEVVWRRPVGEQV-IEVVEI 161


>UniRef50_Q13CU9 Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris
           BisB5 RepID=Q13CU9_RHOPS
          Length = 156

 Score = 82.9 bits (204), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 40/124 (32%), Positives = 58/124 (46%), Gaps = 1/124 (0%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFR 63
           P + I   D  R+  +  Q   +  P+   L +EL+RA +      P   V ++  V FR
Sbjct: 3   PPVSIASRDFGRLRQIAVQALASRDPVGRFLFSELERAVVID-SPAPPLTVRLDDWVTFR 61

Query: 64  NLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLE 123
              D  +  R LV P     +   LSV++PVGAAL+GLR G  +H++   GV     V  
Sbjct: 62  ADDDQPLESRILVLPGHYRRNALHLSVLSPVGAALVGLRPGARMHYQGVDGVQHVATVES 121

Query: 124 LEYQ 127
           LE  
Sbjct: 122 LEPP 125


>UniRef50_B1ZD84 GreA/GreB family elongation factor n=4 Tax=Methylobacterium
           RepID=B1ZD84_METPB
          Length = 149

 Score = 82.9 bits (204), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 39/127 (30%), Positives = 61/127 (48%), Gaps = 1/127 (0%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVK 61
            RP I +   D +R+          G P AD L ++L+RA   +    P DVV +  RV+
Sbjct: 6   KRPPITLPTYDFDRLVASGLAAYQRGDPYADLLLSKLERAASFAASPPPRDVVAVTCRVR 65

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWE-LPGGVATHLE 120
           +R   +  VR   LVYP  +  S  ++S  + +G A+LGLR GD I +     G    +E
Sbjct: 66  YRLDDEPTVRAHRLVYPGHVIASEEEISAASALGVAMLGLRRGDRIPFRDNATGSEHVVE 125

Query: 121 VLELEYQ 127
           + ++   
Sbjct: 126 IADVGPP 132


>UniRef50_Q11G80 GreA/GreB family elongation factor n=1 Tax=Chelativorans sp. BNC1
           RepID=Q11G80_MESSB
          Length = 176

 Score = 81.7 bits (201), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 35/126 (27%), Positives = 53/126 (42%), Gaps = 1/126 (0%)

Query: 7   IINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLS 66
            +   D E +  + E+       +   L  +L+ A++  PE  P DVVT+NSR+ FR + 
Sbjct: 8   TLTTRDFETLQQMFEEHRDRNEAMTMLLRHKLETARVTRPEVTPDDVVTLNSRISFR-VG 66

Query: 67  DGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
           +G    R +            L +    G ALLGL  G          +   L+V  + Y
Sbjct: 67  NGMPETRIICRDRSRGPLGYFLPITTIRGLALLGLTEGQMTPVSRGRSLVEILQVTAIHY 126

Query: 127 QPEAAG 132
           QPE A 
Sbjct: 127 QPERAA 132


>UniRef50_D1N5G0 GreA/GreB family elongation factor n=1 Tax=Victivallis vadensis
           ATCC BAA-548 RepID=D1N5G0_9BACT
          Length = 698

 Score = 81.3 bits (200), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 23/132 (17%), Positives = 40/132 (30%), Gaps = 15/132 (11%)

Query: 4   PTIIINDLDAERIDILLEQPAYAGLPIAD--------ALNAELDRAQMCSPEEMP-HDVV 54
           P        A       E   +                L  EL R Q  S + +   D  
Sbjct: 562 PENREALKVARAHGDFRENSEFDAAKERRNFLSRRRGELERELTRIQPISLKSVRVEDSA 621

Query: 55  TMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGG 114
            + S ++ ++ + GE  V  L+           LS    +G A+L  +VG         G
Sbjct: 622 VIGSEIELQDEN-GEKEVYQLLGAWDGDPERRFLSYRTRLGKAVLNRKVGSEFS----DG 676

Query: 115 VATHLEVLELEY 126
                +++ +  
Sbjct: 677 S-RQYKLIAVRP 687


>UniRef50_C1CW74 Putative transcription elongation factor n=1 Tax=Deinococcus
           deserti VCD115 RepID=C1CW74_DEIDV
          Length = 162

 Score = 80.6 bits (198), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 30/128 (23%), Positives = 46/128 (35%), Gaps = 10/128 (7%)

Query: 9   NDLDAERIDILLEQPAY------AGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKF 62
              DA  ++      A       A       L   L RA +   E++P   V + S V  
Sbjct: 36  TVDDAMDLENRSLNAAQIGQERIAIEARILELEDVLARAVIVEEEDLPRGQVAVGSVVML 95

Query: 63  RNLSDGEVRVRTLVYPAKMTDSNT---QLSVMAPVGAALLGLRVGDSIHWELPGGVATHL 119
            +   G      LV   +++       Q+S  +PVG AL+G R G++   EL  G     
Sbjct: 96  EDDKHGRQLQVQLVSAVEISAMTEGVTQVSDDSPVGKALMGRREGETFDVELEAGRVQ-Y 154

Query: 120 EVLELEYQ 127
            V  +   
Sbjct: 155 TVRSVTAP 162


>UniRef50_B6BTF1 GreA/GreB family elongation factor n=2 Tax=Betaproteobacteria
           RepID=B6BTF1_9PROT
          Length = 164

 Score = 80.2 bits (197), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 18/120 (15%), Positives = 40/120 (33%), Gaps = 5/120 (4%)

Query: 9   NDLDAERIDILLEQPA--YAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLS 66
                + ++   E                   + A +    E  ++ V   + V   + +
Sbjct: 48  EIKSIKELEDSPENKQNKMKLERDLRYYLKRFETAILIDKHE-ENNKVLFGAHVILIDEN 106

Query: 67  DGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
           D E     +V   +      +LS ++P+   L+G  +GD + W+   G      +  + Y
Sbjct: 107 D-EAYKFQIVGEDEADIKQNKLSYVSPLAKELIGSLIGDEVVWKRADGNRVVF-IDSINY 164


>UniRef50_C6UNA6 Putative transcription elongation factor GreA n=1 Tax=Candidatus
           Hodgkinia cicadicola Dsem RepID=C6UNA6_HODCD
          Length = 155

 Score = 79.8 bits (196), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 19/116 (16%), Positives = 39/116 (33%), Gaps = 10/116 (8%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHDV 53
            +P +      A  +  L E   Y              + +   L RA+  +P     + 
Sbjct: 25  KKPALKAQLKAARSLGDLSENADYQAARREDKLNEARINEILQTLARAK-LAPARSAANR 83

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHW 109
            + NS V  +    G++    +V   +   +   + + + V    L  +VGD +  
Sbjct: 84  PSYNSTVVLKRAD-GKLLAFNIVGDDEAIATEANVGLSSDVARQCLNKKVGDVVVV 138


>UniRef50_Q1IZY0 GreA/GreB family elongation factor n=4 Tax=Deinococci
           RepID=Q1IZY0_DEIGD
          Length = 162

 Score = 79.8 bits (196), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 21/103 (20%), Positives = 38/103 (36%), Gaps = 4/103 (3%)

Query: 27  GLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNT 86
                + L   L RA +    E     V + + V   N +  +     +V   + T    
Sbjct: 61  IEARIEELEDTLARATLIEDHE-NAGRVELGAVVTLNNETTKQTMRVQVVSAPEATVLGG 119

Query: 87  ---QLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
              ++S  +PVG  L+G +  ++    L  G      V ++EY
Sbjct: 120 SLPRISEESPVGRQLMGRKKDETFVVNLENGKQVKYRVQDIEY 162


>UniRef50_A1TEF4 GreA/GreB family elongation factor n=5 Tax=Actinomycetales
           RepID=A1TEF4_MYCVP
          Length = 159

 Score = 79.4 bits (195), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 20/94 (21%), Positives = 32/94 (34%), Gaps = 1/94 (1%)

Query: 30  IADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLS 89
               ++  L RA   S       +      +  R    G+     L             +
Sbjct: 52  RIRQIHELLSRAD-HSTSPADDGIAEPGMVLTVRFDDTGDTETFLLGTRGTADPELEVYT 110

Query: 90  VMAPVGAALLGLRVGDSIHWELPGGVATHLEVLE 123
           V +P+G+ALLG   G+   + LP G    + VL 
Sbjct: 111 VASPLGSALLGAVPGEQRSFRLPNGSIQQVTVLA 144


>UniRef50_B0T2S8 GreA/GreB family elongation factor n=15 Tax=Alphaproteobacteria
           RepID=B0T2S8_CAUSK
          Length = 161

 Score = 78.6 bits (193), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 21/102 (20%), Positives = 38/102 (37%), Gaps = 7/102 (6%)

Query: 23  PAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMT 82
                       +A    AQ+   +    DV+     V F +  DG  +   +V   +  
Sbjct: 64  AMARATRDLRYWSARRASAQLRELDPA-LDVLQFGGSVTF-DREDGRRQTFRIVGEDEAD 121

Query: 83  DSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
            +   +S ++PV  ALLG  VGD+            +E++ +
Sbjct: 122 PTQGSVSYVSPVARALLGKAVGDTAIVAGG-----EVEIIAI 158


>UniRef50_Q1IXC6 GreA/GreB family elongation factor n=1 Tax=Deinococcus geothermalis
           DSM 11300 RepID=Q1IXC6_DEIGD
          Length = 158

 Score = 78.6 bits (193), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 42/125 (33%), Gaps = 8/125 (6%)

Query: 7   IINDLDAERIDILLEQPAYAG----LPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKF 62
                DA  ++    Q A             L   L RA +    +     V + S V  
Sbjct: 34  AATLDDAMDLEDRSFQAAQYDLPTMEARILELEDVLARAVIVEEPQARDGGVALGSVVVL 93

Query: 63  RNLSDGEVRVRTLVYPAKMTDSNT---QLSVMAPVGAALLGLRVGDSIHWELPGGVATHL 119
           R+          LV   ++        Q+S  +PVG ALLG R G+S   +L    A   
Sbjct: 94  RDEQHDRELRVQLVSAVEVDALAEGATQVSEDSPVGKALLGRRAGESFEVDLGSSRAR-Y 152

Query: 120 EVLEL 124
            V  +
Sbjct: 153 TVKSI 157


>UniRef50_C6XVH8 Transcription elongation factor n=1 Tax=Pedobacter heparinus DSM
           2366 RepID=C6XVH8_PEDHD
          Length = 125

 Score = 77.9 bits (191), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 35/124 (28%), Positives = 61/124 (49%), Gaps = 8/124 (6%)

Query: 6   IIINDLDAERIDILLEQ---PAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKF 62
           II++    + +   + +     Y        L  EL  A+    +++P DVVT+N+RV+ 
Sbjct: 5   IILSTGIFDLLKDHIRRRKLSKYNQEK----LEQELRNARQILSKDIPADVVTVNTRVRV 60

Query: 63  RNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVL 122
           + L  G     TLV PAK  + +  LS+++P+G A++G   G  + WE+P G      + 
Sbjct: 61  KELETGAEFNYTLVPPAKARNKHNTLSILSPIGVAMVGYSQGSELKWEMPEG-IKAYRIE 119

Query: 123 ELEY 126
           E+  
Sbjct: 120 EVTR 123


>UniRef50_A7HXN3 GreA/GreB family elongation factor n=1 Tax=Parvibaculum
           lavamentivorans DS-1 RepID=A7HXN3_PARL1
          Length = 171

 Score = 76.7 bits (188), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 3/129 (2%)

Query: 3   RPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKF 62
           RP  ++   D  R+++   +      P+   + A+L+ A++ S  E+   V T+ S V++
Sbjct: 24  RP--LLTRHDFARLELACFEQLDLLNPMQPFVRAKLEEARIVSGNEIAETVATLGSIVRY 81

Query: 63  RNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVL 122
           R       R    +       +   LSV+ P+G ALLG   GD    EL  G    + + 
Sbjct: 82  RIEDRMLERRLLQLDNRHA-PNGQYLSVLTPIGLALLGRSTGDLCEAELFNGAKLTIRIA 140

Query: 123 ELEYQPEAA 131
            +E+QPEA 
Sbjct: 141 LIEHQPEAE 149


>UniRef50_A4T6M8 GreA/GreB family elongation factor n=3 Tax=Mycobacterium
           RepID=A4T6M8_MYCGI
          Length = 157

 Score = 75.9 bits (186), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 21/107 (19%), Positives = 38/107 (35%), Gaps = 1/107 (0%)

Query: 17  DILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLV 76
              +     A       ++  L +A+  + +     V      +  R    G+     L 
Sbjct: 33  SDEVVDAWLARKERIRQIHELLTKAE-HAVDPADDGVAEPGMVLTVRFDDAGDTETFLLG 91

Query: 77  YPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLE 123
             A +       SV +P+G+ALLG   G    ++LP G    + +L 
Sbjct: 92  TRATVDSELDVYSVNSPMGSALLGATPGQQRSYQLPNGGTQQVTLLS 138


>UniRef50_UPI0001B58AC8 GreA/GreB family elongation factor n=1 Tax=Streptomyces sp. AA4
           RepID=UPI0001B58AC8
          Length = 148

 Score = 75.9 bits (186), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 18/99 (18%), Positives = 33/99 (33%), Gaps = 2/99 (2%)

Query: 25  YAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDS 84
                    L   L  A +   +     +      +  R    G V    L    ++   
Sbjct: 41  QHRQARIRQLQDLLQNA-VVGEDPPDDGIAEPGMVLTVRYDDGG-VETFLLAARDEVGGG 98

Query: 85  NTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLE 123
               S  +P+G AL G + G+   +E+P G    + ++E
Sbjct: 99  LEVYSPDSPLGRALHGAKPGEQREYEVPSGALVRVTLVE 137


>UniRef50_Q9RRW0 Transcription elongation factor n=1 Tax=Deinococcus radiodurans
           RepID=Q9RRW0_DEIRA
          Length = 183

 Score = 75.9 bits (186), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 30/133 (22%), Positives = 47/133 (35%), Gaps = 10/133 (7%)

Query: 2   SRPTIIINDLDAERIDILLEQPAYAG----LPIADALNAELDRAQMCSPEEMPHDVVTMN 57
               ++   ++A   + L    A           + L  +L RA + +P         + 
Sbjct: 51  EARRVVQEQMEANENESLDLAAAQETLGAVEARIEELEDQLARAVVLAPGAGNDGRAAVG 110

Query: 58  SRVKFRNLSDGEVRVRTLVYPAKMTDSNT-----QLSVMAPVGAALLGLRVGDSIHWELP 112
           SRV   N+  G      LV  A+            +S  +PVG ALLG R G+    +L 
Sbjct: 111 SRVTLLNIGLGRELPLHLVSAAEAAAGPGTSGVALVSTESPVGRALLGRRAGEEFTVDLG 170

Query: 113 GGVATHLEVLELE 125
                   VL +E
Sbjct: 171 R-TQAQYRVLMVE 182


>UniRef50_UPI0001746B72 nucleoside diphosphate kinase regulator protein, putative n=1
           Tax=Verrucomicrobium spinosum DSM 4136
           RepID=UPI0001746B72
          Length = 137

 Score = 75.2 bits (184), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 45/118 (38%), Gaps = 4/118 (3%)

Query: 14  ERIDILLEQPAYAGLPIADALNAELDRAQMC-SPEEMPHDVVTMNSRVKFRNLSD--GEV 70
                  +            L   L  A++     +    V  + + V+  +LS    + 
Sbjct: 18  RTFLDHDDAFNPLDARERSLLIERLQDAKVFEDESDDEPSVAGLQTLVRVEDLSTSPPDQ 77

Query: 71  RVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQP 128
              TLV P +    + Q+S+++P+GAA+ G   G  +  + P G    L VL +  + 
Sbjct: 78  FDFTLVLPHEANFEDDQISILSPLGAAVFGRSAGTQVVMDSPTGT-RRLLVLAVFRKA 134


>UniRef50_A3DJU3 GreA/GreB family elongation factor n=3 Tax=Clostridium thermocellum
           RepID=A3DJU3_CLOTH
          Length = 160

 Score = 75.2 bits (184), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 46/119 (38%), Gaps = 3/119 (2%)

Query: 13  AERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRV 72
                              D +N+ L+  ++          V +NS V+  +  + E   
Sbjct: 33  YAEETKESINFQEFFKNYLDRINSYLNTVRVDKNGSEACPFVIINSIVEVFDCEEEEKCK 92

Query: 73  RTLVYP--AKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQPE 129
             +V P   +   S    S ++P+G ALL   V D++  ++P G+  H  +L++    E
Sbjct: 93  YRIVLPFSKEYDTSIDCASCLSPLGRALLFKNVNDNVSVQIPTGM-LHYTILDITLPDE 150


>UniRef50_Q1YFK5 Possible transcription elongation factor, GreA/GreB family n=2
           Tax=Aurantimonadaceae RepID=Q1YFK5_MOBAS
          Length = 158

 Score = 74.4 bits (182), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 21/133 (15%), Positives = 44/133 (33%), Gaps = 15/133 (11%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGL--------PIADALNAELDRAQMCSPEEMPHD 52
           ++   + + D +   ++   E    A                NA    A++  P +    
Sbjct: 29  VTPRGLSLIDAEIAALNERKEAARQADDKIAIANINRDLRYWNARRATAELIRPRDT-GG 87

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
                S V       G  +  T+V   +   S   +S ++P+  +L+G  VGD +     
Sbjct: 88  TAQFGSVVSIERED-GRTQQFTIVGIDEADPSAGLISYLSPLARSLIGRTVGDIVRAGTA 146

Query: 113 GGVATHLEVLELE 125
                  E++ + 
Sbjct: 147 D-----AEIIAIS 154


>UniRef50_A4CMC2 Putative uncharacterized protein n=1 Tax=Robiginitalea biformata
           HTCC2501 RepID=A4CMC2_9FLAO
          Length = 149

 Score = 74.0 bits (181), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 51/129 (39%), Gaps = 6/129 (4%)

Query: 1   MSRPTIIINDLDAERIDILLE----QPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTM 56
           M    ++    + + + + LE       YA    A  L   +  A +    E P DVV  
Sbjct: 2   MKYGKLVFERQEYDALLMSLEANRVYDDYAHQHAARLLKRNMASALILDQGECPDDVVRP 61

Query: 57  NSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVA 116
           +  V  + +     R   L    K   +   +SV++ +GA+++G   GD I +  P G  
Sbjct: 62  DVWVTLKGVPS-YRRTVRLASSGKPITTPGDISVISALGASIIGRSEGDVILFGQP-GNT 119

Query: 117 THLEVLELE 125
             L + ++ 
Sbjct: 120 MSLTIAKIS 128


>UniRef50_B1ZXU0 GreA/GreB family elongation factor n=1 Tax=Opitutus terrae PB90-1
           RepID=B1ZXU0_OPITP
          Length = 204

 Score = 73.2 bits (179), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 25/157 (15%), Positives = 57/157 (36%), Gaps = 22/157 (14%)

Query: 1   MSRPTIIINDLDAERIDILLEQPAYAGLPI-ADALNAEL---------DRAQMCSPEEM- 49
           + R  ++++ ++A     L E   +        A++ ++         +  +   P    
Sbjct: 38  VKRAALVLDKIEAHSQGDLRENFGFKAAKEAIRAVDRKMMALDRFVARNTFKEVDPAAWL 97

Query: 50  --PHDVVTMN--SRVKFRNLSDGEVRVRT-LV---YPAKMTDSNTQ--LSVMAPVGAALL 99
               D + +   + ++ ++++       T LV           +    L   +P+  A+L
Sbjct: 98  TKSTDTLQLGHVTTIEKQDVTTKRTHSFTFLVTTYGETASDPDSGLECLPHTSPLATAVL 157

Query: 100 GLRVGDSIHWELPGGVATHLEVLELEYQPEAAGDYLL 136
           GL  G      LP G +  L ++ +    +A  D LL
Sbjct: 158 GLAAGAQTKVMLPAGESL-LTLISIRNPTQAELDRLL 193


>UniRef50_Q2SLP2 Transcription elongation factor n=1 Tax=Hahella chejuensis KCTC
           2396 RepID=Q2SLP2_HAHCH
          Length = 160

 Score = 72.9 bits (178), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 40/129 (31%), Gaps = 11/129 (8%)

Query: 5   TIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEM-PHDVVTMNSRVKFR 63
              + +   +   +     A           A L   Q   P+     D V + + V   
Sbjct: 35  EESVAENKYDTFGLEASYLAEGQSRRVREFEAALASYQNTPPKHFTDQDEVAVFALVTLE 94

Query: 64  NLSDGEVRVRTLVYPAKMTDS-------NTQLSVMAPVGAALLGLRVGDSIHWELPGGVA 116
                E R+   V P                ++  +P+G  L+G  VGD +      G  
Sbjct: 95  AEDGSERRLF--VGPEAAGFKFLLDEQEVLVITRRSPIGMKLMGKMVGDVVALVAGNGE- 151

Query: 117 THLEVLELE 125
              E++E+E
Sbjct: 152 KEFEIVEIE 160


>UniRef50_C0QME5 GreA2 n=1 Tax=Desulfobacterium autotrophicum HRM2
           RepID=C0QME5_DESAH
          Length = 95

 Score = 72.1 bits (176), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 26/49 (53%), Positives = 35/49 (71%)

Query: 88  LSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQPEAAGDYLL 136
           +S++APVG+ALLGL +GD I W  PGG    + + E+ YQPE +GDY L
Sbjct: 47  ISILAPVGSALLGLSIGDKIEWPKPGGGNLKVRITEIIYQPERSGDYQL 95


>UniRef50_D0J1H3 Putative uncharacterized protein n=1 Tax=Comamonas testosteroni
           CNB-2 RepID=D0J1H3_COMTE
          Length = 160

 Score = 72.1 bits (176), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 45/125 (36%), Gaps = 11/125 (8%)

Query: 8   INDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDV-VTMNSRVKFRNLS 66
           I +   + + +     A      A+A+   +   +   P+       + + + +   +  
Sbjct: 38  IAENKYDTLGLEASYLAAGQARRAEAIRQAMANWRQFRPQPYNASKGIQLGALICLVDSD 97

Query: 67  DGEVRVRTLVYPAKMTDS-------NTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHL 119
           D + ++   + P                +S  AP+G A+LG   GD +  ++   V    
Sbjct: 98  DKQQQIF--LGPDGGNMKLFNGAELIQVISSKAPLGRAMLGKCEGDEVSIQV-APVRQQF 154

Query: 120 EVLEL 124
           EVL +
Sbjct: 155 EVLWV 159


>UniRef50_A6NYB0 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus
           ATCC 29799 RepID=A6NYB0_9BACE
          Length = 163

 Score = 72.1 bits (176), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 39/129 (30%), Gaps = 13/129 (10%)

Query: 8   INDLDAE----RIDILLEQPAYAGLPI--------ADALNAELDRAQMCSPEEMPHDVVT 55
             + DA      +    E   +               +L   LD  +  S    P   V 
Sbjct: 35  KEEQDAAQRASAMGDRSENAEWQIANDNIARYTVSIMSLVNTLDTYKKFSASYTPTGKVM 94

Query: 56  MNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGV 115
           + S +K  +          +            +S   P+G+A+LG   G  +  + P G 
Sbjct: 95  VGSTLKVVDRRHNSTLYIKIYPAGLGNAKIGAISTATPLGSAVLGKTAGTEVIVKAPLGD 154

Query: 116 ATHLEVLEL 124
             +  + E+
Sbjct: 155 IPYY-IEEV 162


>UniRef50_C0ZE34 Putative uncharacterized protein n=1 Tax=Brevibacillus brevis NBRC
           100599 RepID=C0ZE34_BREBN
          Length = 164

 Score = 71.7 bits (175), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 56  MNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGV 115
           + S VK     D      T+VYP  +   N ++S ++P+G  LL     DS+  E P G 
Sbjct: 86  LGSSVKVLFEEDQFEESFTVVYPTDIDPDNNRISFLSPIGRQLLLAAPHDSVVLESPVGR 145

Query: 116 ATHLEVLELEY 126
              ++V E+ +
Sbjct: 146 QQ-VQVREISF 155


>UniRef50_UPI0001AF7313 transcription elongation factor GreA n=1 Tax=Mycobacterium kansasii
           ATCC 12478 RepID=UPI0001AF7313
          Length = 159

 Score = 69.8 bits (170), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 17/111 (15%), Positives = 35/111 (31%), Gaps = 3/111 (2%)

Query: 23  PAYAGLP-IADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKM 81
             Y         +   L  A +   +     +      V     + G+     L      
Sbjct: 45  ARYCARKARIREIEQLLSSA-IVGVDTGGDVIAQPGMVVTISYEATGQTETFLLGRRGAQ 103

Query: 82  TDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE-VLELEYQPEAA 131
                  S ++P+G A+ G R+G+   + +P G    +  +  + Y+   A
Sbjct: 104 NADIPVYSTLSPLGRAITGARLGEQRVYSIPQGADLVVTLIEAVPYRDGRA 154


>UniRef50_UPI0001AF7314 transcription elongation factor GreA n=1 Tax=Mycobacterium kansasii
           ATCC 12478 RepID=UPI0001AF7314
          Length = 160

 Score = 69.8 bits (170), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 17/94 (18%), Positives = 33/94 (35%), Gaps = 1/94 (1%)

Query: 30  IADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLS 89
               ++  L RA +   +     +      +  R    G+     L             S
Sbjct: 56  RIRRIHDLLVRADV-GEDPPDDGIAEPGMVLTVRYHDTGDTETFLLGARGAEHCDVEVYS 114

Query: 90  VMAPVGAALLGLRVGDSIHWELPGGVATHLEVLE 123
             +P+GAA++G   G+   + LPGG    + ++ 
Sbjct: 115 PRSPLGAAVIGAIPGEQRSFTLPGGANLTVTLVS 148


>UniRef50_B4RBL3 Transcription elongation factor GreA/GreB family n=1
           Tax=Phenylobacterium zucineum HLK1 RepID=B4RBL3_PHEZH
          Length = 131

 Score = 68.6 bits (167), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 25/95 (26%), Positives = 49/95 (51%), Gaps = 3/95 (3%)

Query: 32  DALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVM 91
           + L  E++R  + + +++    V +NS V +++L     R+  +V P        ++S++
Sbjct: 38  ELLRREVERMAIRAYDDLR--FVRLNSTVTYKDLRTRRRRIVQVVQPEHAHQDENRVSIL 95

Query: 92  APVGAALLGLRVGDSIHWELP-GGVATHLEVLELE 125
           +P+GAAL+GL  G    W     G    ++VL +E
Sbjct: 96  SPIGAALIGLPEGSVFRWAERIDGATRAVKVLAVE 130


>UniRef50_Q3A1F8 GreA/GreB family elongation factor n=4 Tax=Desulfuromonadales
           RepID=Q3A1F8_PELCD
          Length = 185

 Score = 67.8 bits (165), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 19/126 (15%), Positives = 41/126 (32%), Gaps = 12/126 (9%)

Query: 8   INDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDV-VTMNSRVKFRNLS 66
           I D     + +     A      A  +   L   +  + +    +  +   + V+  +  
Sbjct: 64  IPDNKYATLGLEASYLAQGYANRAQEIRHALQAFRQLTLQRFSENSPIRQTALVQLEDEE 123

Query: 67  DGEVRVRTLVYPAKMTDSNT-------QLSVMAPVGAALLGLRVGDSIHWELPGGVATHL 119
               R    + PA      +        ++  +P+G ALLG + GD +      G     
Sbjct: 124 G--QRRWLFLGPAAGGLRLSFGKREVMVITPASPLGKALLGKQCGDLVEIAGDVG--REY 179

Query: 120 EVLELE 125
           E++ + 
Sbjct: 180 EIVSIA 185


>UniRef50_Q4K8S4 Putative uncharacterized protein n=1 Tax=Pseudomonas fluorescens
           Pf-5 RepID=Q4K8S4_PSEF5
          Length = 139

 Score = 67.8 bits (165), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 16/126 (12%), Positives = 37/126 (29%), Gaps = 11/126 (8%)

Query: 8   INDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDV-VTMNSRVKFRNLS 66
           I +   + + +     A       + +   L   Q  S         + + + +   + +
Sbjct: 17  IAENKYDTLGLEASYLAAGQARRVEEIRQALGLWQNLSLRPYDPQKGIQIGALLGLEDEN 76

Query: 67  DGEVRVRTLVYPAKMTDSNTQ-------LSVMAPVGAALLGLRVGDSIHWELPGGVATHL 119
             E      + P                ++  +P+G +LLG    D +   +  G     
Sbjct: 77  GHEQ--WLFLGPDGAGLKVYVVGQLVTVITPRSPLGKSLLGKFEDDEVEIVV-AGARQQF 133

Query: 120 EVLELE 125
            V E+ 
Sbjct: 134 TVTEVR 139


>UniRef50_A5VFW5 GreA/GreB family elongation factor n=3 Tax=Sphingomonadaceae
           RepID=A5VFW5_SPHWW
          Length = 157

 Score = 67.5 bits (164), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 41/105 (39%), Gaps = 7/105 (6%)

Query: 21  EQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAK 80
           E+   +               ++  P     D     +RV++R   +G+ +   +V   +
Sbjct: 58  EEQLKSLKRDLRYWTTRHATMEIQPPA--DGDEAAFGTRVRYRL--NGQEKAVAIVGDDE 113

Query: 81  MTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
              +   +S  +P+  AL+G   GD   +    G A  +EVL +E
Sbjct: 114 ADPAAGLVSFSSPLARALIGAGEGDFADF---AGKADAIEVLGVE 155


>UniRef50_A4FCQ0 Transcription elongation factor G n=1 Tax=Saccharopolyspora
           erythraea NRRL 2338 RepID=A4FCQ0_SACEN
          Length = 120

 Score = 67.5 bits (164), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 33/111 (29%), Gaps = 6/111 (5%)

Query: 26  AGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSN 85
                   +   L  A +         V      +  R   DGE     L        + 
Sbjct: 5   HRRARIREIQELLHDA-VVGEAPPDDGVAEPGMVLTVRF-DDGETETFLLGARVGADLNG 62

Query: 86  -TQLSVMAPVGAALLGLRVGDSIHWELP---GGVATHLEVLELEYQPEAAG 132
               S  +P+GAA  G R G+   + LP   GG         +  Q EA+ 
Sbjct: 63  LAVYSPESPLGAAQPGARQGEQRAYSLPKKNGGTVLIFVCGAVIRQAEASA 113


>UniRef50_Q930S1 Putative uncharacterized protein n=1 Tax=Sinorhizobium meliloti
           RepID=Q930S1_RHIME
          Length = 183

 Score = 67.1 bits (163), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 1/99 (1%)

Query: 34  LNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAP 93
           L  +L+ A +   E++P +VVT++++V +  ++        LV  A    +N+ +SV   
Sbjct: 44  LREKLNYASVFFREDIPENVVTLDTQVGYT-VNGVRTGPHLLVRNAAGRPANSAISVRTM 102

Query: 94  VGAALLGLRVGDSIHWELPGGVATHLEVLELEYQPEAAG 132
            G ALLGL VG+        G    L V  + +QPE+  
Sbjct: 103 RGLALLGLAVGERTEILGEDGWPETLAVERIVFQPESEA 141


>UniRef50_D0M044 Transcription elongation factor n=15 Tax=Vibrionales
           RepID=D0M044_VIBSE
          Length = 159

 Score = 65.9 bits (160), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 21/127 (16%), Positives = 42/127 (33%), Gaps = 10/127 (7%)

Query: 5   TIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRN 64
              + +   + + +     A+           EL + +     +     V + + V   +
Sbjct: 35  EETVPEHKYDTLALEAAYLAHGQAMRIQESEDELRQYRALVTRDFKGAPVGVGAYVVLAD 94

Query: 65  LSDGEVRVRTLVYPAKMTDSNTQ-------LSVMAPVGAALLGLRVGDSIHWELPGGVAT 117
            +  E      V P     +          L+  +P+G AL G   GD I  ++ G   T
Sbjct: 95  ENLLEKHFF--VGPCSGGLTVKYQAQEVFVLTAKSPLGRALFGKEEGDEIDVKI-GEKTT 151

Query: 118 HLEVLEL 124
             EV+ +
Sbjct: 152 CYEVVTV 158


>UniRef50_Q0F3H5 GreA/GreB family elongation factor n=1 Tax=Mariprofundus
           ferrooxydans PV-1 RepID=Q0F3H5_9PROT
          Length = 161

 Score = 65.5 bits (159), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 19/118 (16%), Positives = 37/118 (31%), Gaps = 7/118 (5%)

Query: 11  LDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEV 70
              E + +     A         +   L   +  S    P  V+ ++S V   +    + 
Sbjct: 44  SKYETMGLEASYLAQGQGKRLLEVERALAYFEQLSL-PAPSPVIGLSSLVVLADEHHEQR 102

Query: 71  RVRTLVYP-----AKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLE 123
            +                  T ++V +P+G+AL+G   GD     +  G      V+ 
Sbjct: 103 YLWLAADAGGLKIDYADTPITIITVKSPLGSALVGKAAGDEFEICI-AGKTRAYTVVS 159


>UniRef50_A1AQR3 GreA/GreB family elongation factor n=4 Tax=Desulfuromonadales
           RepID=A1AQR3_PELPD
          Length = 172

 Score = 64.4 bits (156), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 16/125 (12%), Positives = 42/125 (33%), Gaps = 10/125 (8%)

Query: 8   INDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDV-VTMNSRVKFRNLS 66
           + +   + + +     A         +   +   +  +      D  + + + V  R   
Sbjct: 49  VPENKYDTMGLEASYVAQGQANRGQEIRQAVQEYRFLTLHPFDDDSPIRLTALVTLRAGD 108

Query: 67  DGEVRVRTLVYPAKMTDSNT-------QLSVMAPVGAALLGLRVGDSIHWELPGGVATHL 119
           DG  +   +  P +              ++  +P+G +L+G + GD I      G     
Sbjct: 109 DGTAKNVFI-GPREGGLKVMDQGEEVMVITPASPLGRSLIGRQQGDCIETGSGAG-IREY 166

Query: 120 EVLEL 124
           E++++
Sbjct: 167 EIVQV 171


>UniRef50_A5W772 GreA/GreB family elongation factor n=5 Tax=Proteobacteria
           RepID=A5W772_PSEP1
          Length = 258

 Score = 64.0 bits (155), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 19/125 (15%), Positives = 39/125 (31%), Gaps = 14/125 (11%)

Query: 8   INDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDV-VTMNSRVKFRNLS 66
           I +   + + +     A      +  +   L   Q     +      V +++ V   N  
Sbjct: 140 IAENKYDTLGLEASYLATGQARRSAEIRQALVIYQQLLLRDYDPARGVQVSNLVTLENED 199

Query: 67  DGEVRVRTLVYPAKMTDSNT-------QLSVMAPVGAALLGLRVGDSIHWELPGGVATHL 119
             + R+   + P                ++  +P+G  LLG RV D ++     G     
Sbjct: 200 GAQRRLF--LGPEAAGLKIGEGDGLVTVITPRSPLGQQLLGKRVDDEVNL----GAQVSF 253

Query: 120 EVLEL 124
            V  +
Sbjct: 254 IVDVV 258


>UniRef50_Q39Z43 GreA/GreB family elongation factor n=18 Tax=Proteobacteria
           RepID=Q39Z43_GEOMG
          Length = 160

 Score = 63.2 bits (153), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 42/128 (32%), Gaps = 11/128 (8%)

Query: 5   TIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDV-VTMNSRVKFR 63
              I D   +   +     A      A  +   L+  ++ +  E   +  + + + V   
Sbjct: 35  EECIPDNKYDTTALEASYVAQGQANRAQEIRMALESYRVLALREFDDETPIRLTALVILE 94

Query: 64  NLSDGEVRVRTLVYPAKMTDSNT-------QLSVMAPVGAALLGLRVGDSIHWELPGGVA 116
           +      RV   + P                ++  +P+G  LLG  VGD +     GG  
Sbjct: 95  DEDGEARRVF--LGPEAGGLKIADGEGEIVVITPQSPLGRVLLGKVVGDQLQ-AGMGGTR 151

Query: 117 THLEVLEL 124
               V+E+
Sbjct: 152 KTFTVVEV 159


>UniRef50_A4VNK9 Transcription elongation factor n=1 Tax=Pseudomonas stutzeri A1501
           RepID=A4VNK9_PSEU5
          Length = 158

 Score = 62.5 bits (151), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 14/126 (11%), Positives = 32/126 (25%), Gaps = 11/126 (8%)

Query: 7   IINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLS 66
              +   +   +     A         +   L   +           V + + +      
Sbjct: 37  SKAENKYDTRGLEAAYLADGQRRRLHEIETALAAYRNLQAGVSSDGRVRVGALLCL---D 93

Query: 67  DGEVRVRTLVYPAKMTDSNTQ-------LSVMAPVGAALLGLRVGDSIHWELPGGVATHL 119
                    + P                ++  +P+G  LLG  + D +   +  G     
Sbjct: 94  HDGAERWFFLGPDAAGLKLQHDGREILVITARSPLGQGLLGRELRDEVELRV-HGQLQRY 152

Query: 120 EVLELE 125
           EVL++ 
Sbjct: 153 EVLQIA 158


>UniRef50_Q5QX13 Transcription elongation factor greA/greB family n=1 Tax=Idiomarina
           loihiensis RepID=Q5QX13_IDILO
          Length = 151

 Score = 62.5 bits (151), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 2/93 (2%)

Query: 33  ALNAELDRAQMCSPEE-MPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVM 91
            L+  L+R +    +E +    + + +    RN+   E     LV P      N  +S +
Sbjct: 50  ELSILLNRLEFSESKEALIEKRIRVGASAVLRNVKTMEQVKVRLVPPELADTDNYLVSFI 109

Query: 92  APVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
           +P+G+ LLGLRVGD     +   ++   EVL +
Sbjct: 110 SPLGSTLLGLRVGDIATVIVKD-ISIKWEVLTV 141


>UniRef50_B1ZU18 GreA/GreB family elongation factor n=1 Tax=Opitutus terrae PB90-1
           RepID=B1ZU18_OPITP
          Length = 162

 Score = 62.1 bits (150), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 40/94 (42%), Gaps = 3/94 (3%)

Query: 38  LDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAA 97
           LDRA +        + + +    ++ +L +G +    L  P +   +   + V++  GAA
Sbjct: 38  LDRAAILPLSADWPEAIRLGVAFEYEDLDNGVIHTGCLCLPDEEATTAHGIPVLSRFGAA 97

Query: 98  LLGLRVGDSIHWELPGGVATHL--EV-LELEYQP 128
           ++G  VG+ + W         L   V   + ++P
Sbjct: 98  VIGCCVGNEVWWAEMDRSRRILVRRVGTAVAHEP 131


>UniRef50_D0M4S6 Putative uncharacterized protein n=7 Tax=Vibrio RepID=D0M4S6_VIBSE
          Length = 138

 Score = 61.7 bits (149), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 32/84 (38%), Gaps = 1/84 (1%)

Query: 53  VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP 112
            + +   V+  ++        TLV   K       L+V + +G+ LLG    D+   E+ 
Sbjct: 49  RIAVGDTVRLVDVERAYQYRMTLVNSHKSQPMTGMLAVDSYLGSRLLGRAKNDAFEIEIF 108

Query: 113 GGVATHLEVLELEYQPEAAGDYLL 136
                   + E+ +Q +     +L
Sbjct: 109 N-QRRCFVITEIVHQSQPPAQKML 131


>UniRef50_C9Z2D0 Putative uncharacterized protein n=1 Tax=Streptomyces scabiei 87.22
            RepID=C9Z2D0_STRSW
          Length = 1845

 Score = 61.7 bits (149), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 18/107 (16%), Positives = 33/107 (30%), Gaps = 8/107 (7%)

Query: 25   YAGLPIADALNAELDRAQMCSPEEMPHD------VVTMNSRVKFRNLSDGEVRVRTLVYP 78
                    AL       +    + +P        +V     V   +  +  +    +   
Sbjct: 1740 ADHDRRRQALQERRSHLRAVLDQVVPDSSLTGGAMVVPGCLVGVEDPDEPGIMTYEI--A 1797

Query: 79   AKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
                D   +LS   P G AL+   VGD + W+   G    + V  ++
Sbjct: 1798 MLAGDEAERLSPDTPQGKALMWREVGDEVSWQTERGTRMRVIVRYIQ 1844


>UniRef50_Q1MZY3 Putative uncharacterized protein n=1 Tax=Bermanella marisrubri
           RepID=Q1MZY3_9GAMM
          Length = 155

 Score = 61.3 bits (148), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 15/124 (12%), Positives = 39/124 (31%), Gaps = 10/124 (8%)

Query: 7   IINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMP-HDVVTMNSRVKFRNL 65
              +   + + +     A+      D L  ++ R            D + + + V+  N 
Sbjct: 37  SKAETQYDTLGLEQAYLAHGQSERIDNLQQQIARLNHFDLRTFDEDDEIHLGAFVQLINS 96

Query: 66  SDGEVRVRTLVYPAKMTDSNTQ----LSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
              +     ++ P     +  +    L+   P+  A++GL + D        G      +
Sbjct: 97  QTNKNLDVFIL-PCAGGYTLEKSIHTLTPDTPIAKAIMGLGIDDEFKL----GNGQRYRI 151

Query: 122 LELE 125
            ++ 
Sbjct: 152 TKVS 155


>UniRef50_Q67NL4 Putative transcription elongation factor n=1 Tax=Symbiobacterium
           thermophilum RepID=Q67NL4_SYMTH
          Length = 154

 Score = 61.3 bits (148), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 44/106 (41%), Gaps = 2/106 (1%)

Query: 19  LLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYP 78
           L            +     L+R      + +  DVV M+  V   + +DG   V T+V P
Sbjct: 44  LAYSVRPHLRRYVEVAGQLLERMGGPDGDPVD-DVVFMDVPVTLVDETDGTEEVYTVVLP 102

Query: 79  AKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
            +   +   +S ++P+G ALL  RV D +  + PGG      +  +
Sbjct: 103 EEGDPAKGHISCLSPLGLALLLKRVNDRVVIDAPGGR-FTYRIAAV 147


>UniRef50_A1RN18 GreA/GreB family elongation factor n=11 Tax=Shewanella
           RepID=A1RN18_SHESW
          Length = 135

 Score = 60.9 bits (147), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 36/78 (46%), Gaps = 1/78 (1%)

Query: 48  EMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSI 107
           +   + +T+  ++   NL D +     LVYP K   S  + SV++ +G++LLG   G+  
Sbjct: 48  DTSSNKITVGRQICLINLQDQQEYQVELVYPQKHKPSAGRFSVISDLGSSLLGRTKGELA 107

Query: 108 HWELPGGVATHLEVLELE 125
              +  G      + ++ 
Sbjct: 108 QVNI-LGKPVLFMIKDVS 124


>UniRef50_A8LPH9 Putative uncharacterized protein n=1 Tax=Dinoroseobacter shibae DFL
           12 RepID=A8LPH9_DINSH
          Length = 147

 Score = 60.9 bits (147), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 51/123 (41%), Gaps = 6/123 (4%)

Query: 8   INDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEE----MPHDVVTMNSRVKFR 63
           +   D  ++   LE    A  P ++ L   L   ++ +          D+V   SRV + 
Sbjct: 25  LPAADYRQLQEHLESCVCAIPPASELLVYVLAN-KVMNTRPSENLHQGDLVVGGSRVTYA 83

Query: 64  NLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLE 123
            +  G+     LV+  +   ++  + V + +GA L+G++VG         G    L V+ 
Sbjct: 84  -IDGGDPLRGQLVHRVRKGPTSALIPVASLLGATLIGMQVGQRAPLLFGNGRIGRLAVIA 142

Query: 124 LEY 126
           +++
Sbjct: 143 VDH 145


>UniRef50_B6EH16 Putative uncharacterized protein n=1 Tax=Aliivibrio salmonicida
           LFI1238 RepID=B6EH16_ALISL
          Length = 173

 Score = 60.5 bits (146), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 22/127 (17%), Positives = 43/127 (33%), Gaps = 10/127 (7%)

Query: 7   IINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNS-RVKFRNL 65
            I     E   +     A+         +A++   +     E   D V      V   N 
Sbjct: 49  AIARSKYETFGLEASYLAHGQARRVSECDADILAYRKLPRLEYGEDSVINQCALVTLVNQ 108

Query: 66  SDGEVRVRTL-------VYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATH 118
            D E +   +       V       +   ++  AP+G A++G ++GD    +L  G    
Sbjct: 109 DDIESQ-FFIGPSAGGGVKVTHEDMTFLLITPSAPLGKAMIGKQLGDEFELDL-SGRKQQ 166

Query: 119 LEVLELE 125
            E++ ++
Sbjct: 167 YEIIGVQ 173


>UniRef50_B9ZS32 GreA/GreB family elongation factor n=1 Tax=Thioalkalivibrio sp.
           K90mix RepID=B9ZS32_9GAMM
          Length = 137

 Score = 60.1 bits (145), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 18/86 (20%), Positives = 32/86 (37%), Gaps = 2/86 (2%)

Query: 45  SPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVG 104
                   V+     V+  +L   E  +  L  P        ++S+++P+G+ LLGLR  
Sbjct: 50  DTTPRCGQVIQTGCCVRLLDLQTEETYLVELCEPEHAQPERGKISILSPLGSRLLGLRKN 109

Query: 105 DSIHWELPGGVAT--HLEVLELEYQP 128
                 L         +E+L   + P
Sbjct: 110 SLAEITLLRSRLRFLVIEILAPGHDP 135


>UniRef50_A0QE66 Transcription elongation factor GreA n=2 Tax=Mycobacterium avium
           complex (MAC) RepID=A0QE66_MYCA1
          Length = 177

 Score = 60.1 bits (145), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 21/122 (17%), Positives = 38/122 (31%), Gaps = 9/122 (7%)

Query: 18  ILLEQPAYAGLP------IADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVR 71
             ++                  L   L  A   S +     V      +  R  + GE  
Sbjct: 35  DFMDYRPGRAARPSVRRNRIRVLEELLA-AGPGSGDRAAQAVAAPGMVLTIRYDATGETE 93

Query: 72  VRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQPEAA 131
              L             S+ +P+G ++ G R G+   + +P      + +L++   P A 
Sbjct: 94  TFLLGRRNGGGGRVKVYSMASPLGRSVAGARPGEQRIYAIPNDTGRVVTLLKVV--PYAG 151

Query: 132 GD 133
           GD
Sbjct: 152 GD 153


>UniRef50_A9EFE9 Putative uncharacterized protein n=1 Tax=Oceanibulbus indolifex
           HEL-45 RepID=A9EFE9_9RHOB
          Length = 165

 Score = 59.8 bits (144), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 47/126 (37%), Gaps = 4/126 (3%)

Query: 5   TIIINDLDAERIDILLEQPAYAGLPIADALNAELDR--AQMCSPEEMP-HDVVTMNSRVK 61
             ++   D  ++   LE       P +  L   L      +    ++P  D+V   + V 
Sbjct: 25  PTVLPQSDYHKLQEHLEDCDNVTRPGSTLLAYVLANKLLNVRPVADLPYLDLVLGGTEVT 84

Query: 62  FRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEV 121
           +  +         LV+ A+       ++V + +GA L+G+RVG+        G    L V
Sbjct: 85  YV-IDGAAPSTGLLVHTARPGAPGGVIAVASLLGATLIGMRVGERAPLLNQDGSIVTLSV 143

Query: 122 LELEYQ 127
           + +   
Sbjct: 144 ISVVQP 149


>UniRef50_Q0BS89 Transcription elongation factor greB n=1 Tax=Granulibacter
           bethesdensis CGDNIH1 RepID=Q0BS89_GRABC
          Length = 164

 Score = 59.8 bits (144), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 11/75 (14%), Positives = 19/75 (25%), Gaps = 4/75 (5%)

Query: 21  EQPAYAG--LPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYP 78
           E+               A    AQ+        + V     VK +    G      +V  
Sbjct: 58  EESERRAVLARDLRYWLARRASAQLVPTAPENAEEVAFGDTVKLKL--GGRTVTYRIVGE 115

Query: 79  AKMTDSNTQLSVMAP 93
            +       +S  +P
Sbjct: 116 DEADPKQGLISYASP 130


>UniRef50_A8H435 GreA/GreB family elongation factor n=2 Tax=Shewanella
           RepID=A8H435_SHEPA
          Length = 170

 Score = 59.4 bits (143), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 17/136 (12%), Positives = 36/136 (26%), Gaps = 20/136 (14%)

Query: 7   IINDLDAERIDILLEQPAYAGLPIADALNA----------ELDRAQMCSPEEMPHDVVTM 56
            I     E   +     A+          A           L+   +   +      V +
Sbjct: 38  SIAKSKYETFGLEASYLAHGQSVRVAQCQADIRAFEAMFTRLNSNSIIESKGTKEPKVEL 97

Query: 57  NSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQ-------LSVMAPVGAALLGLRVGDSIHW 109
              V   + +         V P                +++ +P+G  +   R GD    
Sbjct: 98  GRLVLLMDENGKNQ--YLFVGPGAGGLKIAYEHDSIMVVTLESPLGITMANKRQGDDFSL 155

Query: 110 ELPGGVATHLEVLELE 125
            +  G     E++E++
Sbjct: 156 NV-AGNKREYEIIEVK 170


>UniRef50_Q1DFU3 GreA/GreB domain protein n=3 Tax=Myxococcales RepID=Q1DFU3_MYXXD
          Length = 171

 Score = 59.4 bits (143), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 44/128 (34%), Gaps = 17/128 (13%)

Query: 11  LDAERIDILLEQPAYAGLPIADALNA--ELDRAQMCSPEEMPHDVVTMNSRVKF--RNLS 66
             A     L    A     + + L A  +  +A++  P       V + + V     +  
Sbjct: 48  RAALEFGSLATGQAQRARRVQEELQALTKFGQAEV--PRFPRQGPVALGAIVDVSTEDEE 105

Query: 67  DGEVRVRTLVYPAKM---------TDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVAT 117
               R    V PA               + ++  +PVG AL+G + GD++   L  G   
Sbjct: 106 GFSERTFF-VLPAGAGTELTGPGGDGFLSVITPASPVGRALMGRKAGDTVEVML-AGEVR 163

Query: 118 HLEVLELE 125
              VLE+ 
Sbjct: 164 EWTVLEVA 171


>UniRef50_C4DVL0 Transcription elongation factor n=1 Tax=Stackebrandtia nassauensis
           DSM 44728 RepID=C4DVL0_9ACTO
          Length = 152

 Score = 58.6 bits (141), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 24/93 (25%), Positives = 40/93 (43%), Gaps = 4/93 (4%)

Query: 27  GLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNT 86
                + L A LD +   +  +   D+V + S V  R   D       +   A +     
Sbjct: 59  LDARVEKLTARLDASA--TATQGRTDLVDVGSTVTIRFSDDT-TETLHIGEIADVD-DQL 114

Query: 87  QLSVMAPVGAALLGLRVGDSIHWELPGGVATHL 119
            ++  +P+G ALLG R GD++ +  P G AT +
Sbjct: 115 LVTAGSPLGRALLGHRAGDTVSYNTPSGHATAV 147


>UniRef50_C7MX98 Transcription elongation factor n=1 Tax=Saccharomonospora viridis
           DSM 43017 RepID=C7MX98_SACVD
          Length = 154

 Score = 58.2 bits (140), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 49/123 (39%), Gaps = 10/123 (8%)

Query: 9   NDLDAERIDILLEQPA--YAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLS 66
              D+     L+E+           + +   L   Q+ +  E         ++V  R   
Sbjct: 37  PLGDSADQADLVERSEVVSRLDRRINEVVDLL-HGQISTESEGGLPS---GTKVTLRF-D 91

Query: 67  DGEVRVRTLVY-PAKMTDSN-TQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
           DG V    +V   A+  + + + L+  +P+G AL G + GD++ +  P G     E+++L
Sbjct: 92  DGSVEDMVVVGVAAEADEDDTSTLTADSPLGQALAGHQEGDTVTYRTPKGEV-TAEIVKL 150

Query: 125 EYQ 127
              
Sbjct: 151 TPP 153


>UniRef50_C4DV10 Putative uncharacterized protein n=1 Tax=Stackebrandtia nassauensis
            DSM 44728 RepID=C4DV10_9ACTO
          Length = 1498

 Score = 57.4 bits (138), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 38/109 (34%), Gaps = 8/109 (7%)

Query: 20   LEQPAYAGLPIADALNAELDRAQMCS---PEEMPHDVVTMNSRVKFRNLSDGEV-RVRTL 75
             +        +A+ L  EL      +      +  D V + SR++ R L         T+
Sbjct: 1390 ADNATTFKDAVAEELAPELAPLMPTTTNLANRVDADQVAIGSRIRLRFLDGNREVHEGTI 1449

Query: 76   VYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
                        +   +P+G A++G  VGD +   +        EV+ +
Sbjct: 1450 --AEDGDGPT-HIPANSPLGVAIIGAEVGDVVPLLV-DSRIRRFEVVAV 1494


>UniRef50_A6VXC9 GreA/GreB family elongation factor n=2 Tax=Marinomonas
           RepID=A6VXC9_MARMS
          Length = 163

 Score = 57.1 bits (137), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 19/130 (14%), Positives = 37/130 (28%), Gaps = 10/130 (7%)

Query: 5   TIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPH-DVVTMNSRVKFR 63
              + +   +   +     A+           +    +   P  +    V+ +   V   
Sbjct: 35  EESVAENKYDTFGLEASYLAHGQSQRVLDCEKDWLLFEKKQPALIKEEGVIDLWCLVTLT 94

Query: 64  NLSDG-EVRVRTLVYPAKMTDSNTQL-------SVMAPVGAALLGLRVGDSIHWELPGGV 115
            L           + P     +   +       +  +PVG  LLG  VGD +   L  G 
Sbjct: 95  ELESSCGTEKYFFISPCAGGLTIEIIEKKVCLVTPFSPVGKKLLGKVVGDEVEL-LQNGK 153

Query: 116 ATHLEVLELE 125
               E+  +E
Sbjct: 154 QMAYEITTIE 163


>UniRef50_B5FBA9 Transcription elongation factor n=2 Tax=Vibrio fischeri
           RepID=B5FBA9_VIBFM
          Length = 161

 Score = 56.7 bits (136), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 41/126 (32%), Gaps = 9/126 (7%)

Query: 7   IINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDV-VTMNSRVKFRNL 65
            I     E   +     A+          A++   +         D  +   + V   N 
Sbjct: 38  AIARSKYETFGLEASYLAHGQAVRVSECEADILAYRKLPRLVYTEDSSINQCALVTLVNQ 97

Query: 66  SDGEVRVRTL------VYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHL 119
            D       +      V  A      + ++  AP+G A++G ++GD     L  G     
Sbjct: 98  DD-VESTFFIGPSAGGVKVAHQDLVFSLITPSAPLGKAIIGQQLGDEFELNL-AGKKQQY 155

Query: 120 EVLELE 125
           E+++++
Sbjct: 156 EIIDVQ 161


>UniRef50_Q2CH34 Putative uncharacterized protein n=2 Tax=Oceanicola
           RepID=Q2CH34_9RHOB
          Length = 155

 Score = 56.3 bits (135), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/125 (24%), Positives = 46/125 (36%), Gaps = 6/125 (4%)

Query: 8   INDLDAERIDILLEQPAYAGLPIADALNAELD---RAQMCSPEEMPHDVVTMNSRVKFRN 64
           +   D   ++ +L        P    LN  L    R    +PE +P  +V     V +  
Sbjct: 30  LTANDRSGVERMLRHRGTKHAPNPALLNGLLRHKLRISQPAPEPVPPTLVVAGCHVTYMI 89

Query: 65  LSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
             +G  R  TLV          +L V   +GA LLG+R    +      G    L VL++
Sbjct: 90  SGEGA-RSGTLVMS--SVPVPGRLLVATLLGATLLGMRKMQKVPLLRDTGEIDTLVVLDV 146

Query: 125 EYQPE 129
              PE
Sbjct: 147 APPPE 151


>UniRef50_C1YJ21 Transcription elongation factor n=3 Tax=Actinomycetales
           RepID=C1YJ21_NOCDA
          Length = 162

 Score = 55.9 bits (134), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 18/100 (18%), Positives = 33/100 (33%), Gaps = 4/100 (4%)

Query: 29  PIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNT-- 86
                +   L  A +         +      +  R     E     L+     + ++   
Sbjct: 58  ARVHTIERLLSEA-VVDEAAPDDGIAAPGKVLTIRY-DGEEEDEVFLLGVRDASVADRMT 115

Query: 87  QLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
             S  +P+GAAL+G R G+   +  P G    + +L  E 
Sbjct: 116 VYSPESPLGAALVGARQGERRTFTAPRGAVIGVTLLRAEP 155


>UniRef50_C0A4E5 Putative uncharacterized protein n=1 Tax=Opitutaceae bacterium TAV2
           RepID=C0A4E5_9BACT
          Length = 193

 Score = 55.5 bits (133), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 19/132 (14%), Positives = 36/132 (27%), Gaps = 12/132 (9%)

Query: 5   TIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRN 64
                +   +         A     +A  +   ++  +  S        V   S V+  +
Sbjct: 63  EESKPENKYDMHSQEAAYLAEGQARLAGEIARAIESYRALSLA-TSATHVETGSLVRLED 121

Query: 65  LSDGEVRVRTL----------VYPAKMT-DSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113
            +        +          V          T L+  AP+G  LLG  +GD I      
Sbjct: 122 TATRRPIHYFIGPQRGGLTLTVAARDGRSVEITVLTPAAPLGRQLLGHTLGDEISLPGRR 181

Query: 114 GVATHLEVLELE 125
           G      + ++ 
Sbjct: 182 GKTAPARITQIS 193


>UniRef50_A6D862 Putative uncharacterized protein n=1 Tax=Vibrio shilonii AK1
           RepID=A6D862_9VIBR
          Length = 158

 Score = 55.1 bits (132), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 15/111 (13%), Positives = 39/111 (35%), Gaps = 8/111 (7%)

Query: 5   TIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPH-DVVTMNSRVKFR 63
              + +   + + +     A+      + + +++   +          D V + + V+  
Sbjct: 35  EETVPEHKYDTLALEASYLAHGQAVRLEQVKSDIALLRKMVLNPFSSLDNVRLATVVEIE 94

Query: 64  NLSDGEVRVRTLVYPAKMT-----DSNTQLSVMAPVGAALLGLRVGDSIHW 109
           +    EV  R  V P          +   ++  +P+G AL+G  + D +  
Sbjct: 95  DED--EVVSRFFVLPCAGGLTIEEPTIKVVTPHSPLGRALIGKSIDDEVVV 143


>UniRef50_D1CSU3 Transcription elongation factor (Fragment) n=1 Tax=Sinorhizobium
           fredii RepID=D1CSU3_RHIFR
          Length = 109

 Score = 54.8 bits (131), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 36/93 (38%), Positives = 51/93 (54%), Gaps = 1/93 (1%)

Query: 38  LDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAA 97
           L RA++CSP ++P DVVT+NSRV F  +  G  R   LV        N  +SV + +G  
Sbjct: 1   LVRAEICSPRKVPDDVVTINSRVTFC-VDGGVPRTANLVRNESQDFPNYTVSVESLLGLG 59

Query: 98  LLGLRVGDSIHWELPGGVATHLEVLELEYQPEA 130
           LLGLR G +I  E   G    + V+ +++Q  A
Sbjct: 60  LLGLRAGRAIAVETEAGGLQKVNVIRIDFQALA 92


>UniRef50_A2VH02 Transcription elongation factor greA (Transcript cleavage factor
          greA ) (Fragment) n=1 Tax=Mycobacterium tuberculosis C
          RepID=A2VH02_MYCTU
          Length = 110

 Score = 54.8 bits (131), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 17/71 (23%), Gaps = 9/71 (12%)

Query: 2  SRPTIIINDLDAERIDILLEQPAYAGLP--------IADALNAELDRAQMCSPEEMPHDV 53
          +RP I     D      L E   Y                L   L  A++         V
Sbjct: 27 NRPVIAAEINDRREEGDLRENGGYHAAREEQGQQEARIRQLQDLLSNAKV-GEAPKQSGV 85

Query: 54 VTMNSRVKFRN 64
              S VK   
Sbjct: 86 ALPGSVVKVYY 96


>UniRef50_A8FVY8 Putative uncharacterized protein n=1 Tax=Shewanella sediminis
           HAW-EB3 RepID=A8FVY8_SHESH
          Length = 168

 Score = 54.4 bits (130), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 14/134 (10%), Positives = 39/134 (29%), Gaps = 19/134 (14%)

Query: 7   IINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDV-VTMNSRVKFRNL 65
            +     E   +     A+         + +L      +      +  + + + V   + 
Sbjct: 37  TVARSKYETFGLEASYLAHGQAQRVAQCSMDLKAFTELNLCAFNDETPIGLGALVVIMDE 96

Query: 66  SDGEVRVRTLVYPAKM---------------TDSNTQLSVMAPVGAALLGLRVGDSIHWE 110
            D E  +   + P                        ++  +P+G AL+G  + D++   
Sbjct: 97  KDDEQSLF--IGPGAGGVKFSMKVDNQALAEDVEVMVITPSSPLGNALMGRMLDDTVVIN 154

Query: 111 LPGGVATHLEVLEL 124
           +        E++ +
Sbjct: 155 IGDNR-KEYEIIAV 167


>UniRef50_Q0VMM9 Putative uncharacterized protein n=2 Tax=Alcanivorax
           RepID=Q0VMM9_ALCBS
          Length = 144

 Score = 54.0 bits (129), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/96 (25%), Positives = 40/96 (41%), Gaps = 1/96 (1%)

Query: 33  ALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMA 92
            L   +++ +M    E       +  RV   +L D E     L    K    N  LSV++
Sbjct: 32  RLMEVMEKIEMLRGVESDLAAAAVGDRVFLFSLEDEEQMSFILAEAGKRPLDNKDLSVLS 91

Query: 93  PVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQP 128
           P+GAALLG   G  ++ +   G      +L+++   
Sbjct: 92  PLGAALLGSLPGAVVNVDF-LGHRHRYLLLKVKKPA 126


>UniRef50_A1SXZ5 GreA/GreB family elongation factor n=5 Tax=Gammaproteobacteria
           RepID=A1SXZ5_PSYIN
          Length = 160

 Score = 53.6 bits (128), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 40/125 (32%), Gaps = 11/125 (8%)

Query: 8   INDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDV-VTMNSRVKFRNLS 66
           + +   + + +     A            +L   Q  +       + V + + V   +L 
Sbjct: 38  VAENKYDTLALEASYLAQGQAQRVAECAQDLIAFQQLNISAASLKLSVCLGALVLLHDLD 97

Query: 67  DGEVRVRTLVYPAKMTDSNT-------QLSVMAPVGAALLGLRVGDSIHWELPGGVATHL 119
           D E  V     P+               ++  +P+GAA+    VGD I   +        
Sbjct: 98  DNEKYVF--YGPSAGGLKVQFAEKDIVVVTPGSPLGAAIKDRSVGDEISLFIGN-KVIEY 154

Query: 120 EVLEL 124
           E+ E+
Sbjct: 155 EIAEI 159


>UniRef50_Q1K1G0 GreA/GreB family elongation factor n=1 Tax=Desulfuromonas
           acetoxidans DSM 684 RepID=Q1K1G0_DESAC
          Length = 159

 Score = 53.6 bits (128), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/128 (14%), Positives = 40/128 (31%), Gaps = 12/128 (9%)

Query: 5   TIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEM-PHDVVTMNSRVKFR 63
                D   + + +     A      A  L   LD  +    +   P++   + + V   
Sbjct: 35  EETQPDNKYDTLALESSYIAQGHANRAQQLKKALDVYKKLEIQSFAPYEPFYLTALVGIE 94

Query: 64  NLSDGEVRVRTLVYPAKMTDSNT-------QLSVMAPVGAALLGLRVGDSIHWELPGGVA 116
                  ++   + P                ++  +P+ +ALLG +VGD +         
Sbjct: 95  YEDGRLRQLF--LGPEAGGLKVDCDGENVVVITPGSPLCSALLGKQVGDVVS--SGRATD 150

Query: 117 THLEVLEL 124
              E++ +
Sbjct: 151 KEFEIISV 158


>UniRef50_B2IF32 DNA helicase, putative n=2 Tax=Rhizobiales RepID=B2IF32_BEII9
          Length = 1649

 Score = 52.8 bits (126), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 35/78 (44%), Gaps = 2/78 (2%)

Query: 45   SPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVG 104
              +    + + +  RV  + L D +    T+    +   +N  LSV +P+G+ LLG    
Sbjct: 1568 EGKPPSPEGIRIGDRVIIQYLDDHKTMSFTITKDKE-DYANGFLSVGSPLGSQLLGAVED 1626

Query: 105  DSIHWELPGGVATHLEVL 122
            + I +E   G A  + ++
Sbjct: 1627 EEIAFE-ESGRARPVLIV 1643


>UniRef50_B8CMM7 Transcription elongation factor n=1 Tax=Shewanella piezotolerans
           WP3 RepID=B8CMM7_SHEPW
          Length = 190

 Score = 52.8 bits (126), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 15/135 (11%), Positives = 41/135 (30%), Gaps = 20/135 (14%)

Query: 7   IINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMC-------SPEEMPHDV---VTM 56
            + +   +   +     A+           ++   +         +  E   D+   + +
Sbjct: 58  SVAENKYDTFGLEASYLAHGQSVRVAQCQTDITAFEQLFSLLKHRALNESDSDIPLQIAL 117

Query: 57  NSRVKFRNLSDGEVRVRTLVYPAKMTDSNT-------QLSVMAPVGAALLGLRVGDSIHW 109
              V+  +  D  +     + P                ++  +P+G  L+   VGD +  
Sbjct: 118 GHLVELVDEQD--IVSLLFMGPNAGGLKIDFAKCNFMLITPQSPIGEKLMSREVGDEVSI 175

Query: 110 ELPGGVATHLEVLEL 124
            +  G   H E++ +
Sbjct: 176 NV-AGKRHHYEIVGI 189


>UniRef50_UPI0001B57B91 nucleoside diphosphate kinase regulator n=1 Tax=Streptomyces sp.
           AA4 RepID=UPI0001B57B91
          Length = 152

 Score = 52.8 bits (126), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 44/129 (34%), Gaps = 12/129 (9%)

Query: 2   SRPTIIINDLDAERIDILLEQPAY--AGLPIADALNAELDRAQMCSPEEMPHDVVTMNSR 59
            +P       DA     ++++             + A+L+             ++   +R
Sbjct: 33  PQPGEQERTGDAADQADVIDRAEAAARLDRQIADVTAKLEH------GAYDSSLLPDGTR 86

Query: 60  VKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHL 119
           V  R    G+    T+V           ++  +P+G AL   + G+ I +  P G A   
Sbjct: 87  VSLRFSD-GDEEEFTVVTLPGEDADA--ITSDSPLGLALATAKAGEEISYRTPRGQA-TA 142

Query: 120 EVLELEYQP 128
            VL+L    
Sbjct: 143 TVLKLTPPA 151


>UniRef50_A3M8R9 Putative uncharacterized protein n=2 Tax=Acinetobacter baumannii
           ATCC 17978 RepID=A3M8R9_ACIBT
          Length = 1250

 Score = 52.1 bits (124), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 15/95 (15%), Positives = 33/95 (34%), Gaps = 17/95 (17%)

Query: 33  ALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTD-SNTQLSVM 91
               EL  AQ+              + + ++  +  E +   ++   +     N  +S  
Sbjct: 739 FFEEELTNAQI-------------GTAITYKLKNMTETK---IIDFDESLPRDNEFISYE 782

Query: 92  APVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126
           + +   L+G +VGD    +   G     E+ E+  
Sbjct: 783 SELAKNLIGKKVGDKFTIQGTFGFENEYEITEITP 817


>UniRef50_P65095 Uncharacterized protein Rv3788/MT3896 n=17 Tax=Mycobacterium
           RepID=Y3788_MYCTU
          Length = 161

 Score = 51.7 bits (123), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 21/127 (16%), Positives = 41/127 (32%), Gaps = 21/127 (16%)

Query: 5   TIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMN-SRVKFR 63
             I    +   +               + L+  L       P            + V  R
Sbjct: 51  EAIQRADELAILGD-----------RINELDRRLRT----GPTPWSGSETLPGGTEVTLR 95

Query: 64  NLSDGEVRVRTLVYPAKMTD---SNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
               GEV    ++   + T        L+  +P+G AL G + GD++ +  P G    ++
Sbjct: 96  FPD-GEVVTMHVISVVEETPVGREAETLTARSPLGQALAGHQPGDTVTYSTPQGPNQ-VQ 153

Query: 121 VLELEYQ 127
           +L ++  
Sbjct: 154 LLAVKLP 160


>UniRef50_B4D7C3 GreA/GreB family elongation factor n=1 Tax=Chthoniobacter flavus
           Ellin428 RepID=B4D7C3_9BACT
          Length = 159

 Score = 50.5 bits (120), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/127 (16%), Positives = 41/127 (32%), Gaps = 14/127 (11%)

Query: 8   INDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDV-VTMNSRVKFRNLS 66
             +   +   +     A         L       +     + P    V + + +  +N  
Sbjct: 38  KPENKYDTRALEASYLARGQSRQLIELEKAKQEFESLDSADWPPKTPVEIGALLTLKNGP 97

Query: 67  DGEVRVRTLVYPAKMTDSN-------TQLSVMAPVGAALLGLRVGDSIHWELPGGV-ATH 118
             +V    L+ P              T ++  +P+G  L+G   GDSI   LP G     
Sbjct: 98  AEDVY---LLGPRAGGIEVVCEGTPVTVITPQSPIGQLLIGKVAGDSIA--LPQGREQRR 152

Query: 119 LEVLELE 125
            ++L ++
Sbjct: 153 FKILRVQ 159


>UniRef50_A9EFU2 Nucleoside diphosphate kinase regulator n=1 Tax=Oceanibulbus
           indolifex HEL-45 RepID=A9EFU2_9RHOB
          Length = 149

 Score = 50.5 bits (120), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 45/127 (35%), Gaps = 10/127 (7%)

Query: 3   RPTIIINDLDA---ERIDILLEQPAYAGLPIAD-ALNAELDRAQMCSPEEMPHDVVTMNS 58
           R    +   D    ER+  L          + +  L+ +L  A+  +PE  P ++V    
Sbjct: 25  RSRFQLTRADRIGVERLLSLGLTAECPNPALIEGFLHHKLRLARP-APEPTPANLVVAGR 83

Query: 59  RVKFRNLSDGEVR-VRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVAT 117
            V F          V T V      +    + V + +GA +LG++           G   
Sbjct: 84  LVSFMTHGGRARSGVLTFV----PDNDAGCIPVTSFLGATMLGMQKLQRAPLLREDGWID 139

Query: 118 HLEVLEL 124
            L VL++
Sbjct: 140 TLIVLDV 146


>UniRef50_A4CAX2 Putative uncharacterized protein n=1 Tax=Pseudoalteromonas tunicata
           D2 RepID=A4CAX2_9GAMM
          Length = 161

 Score = 50.5 bits (120), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 46/126 (36%), Gaps = 11/126 (8%)

Query: 7   IINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEM-PHDVVTMNSRVKFRNL 65
            + +   + + +     A          + E++  +     E  P D + + + V+  N 
Sbjct: 38  SVAETQYDTLGLESAYLAEGLGRRVVMYHQEMNAYKQLVLREFGPDDAIKVGALVQLGN- 96

Query: 66  SDGEVRVRTLVYPAK-------MTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATH 118
           ++G V+      P              T ++  AP+GAAL+G  + D +   +  G    
Sbjct: 97  NEGVVQTLFF-GPCSGGLIITLAGQKVTVITPSAPLGAALVGKYLDDEVTIMV-AGKKQT 154

Query: 119 LEVLEL 124
             + ++
Sbjct: 155 WSIDKV 160


>UniRef50_UPI0001AEE145 nucleoside diphosphate kinase regulator n=1 Tax=Streptomyces albus
           J1074 RepID=UPI0001AEE145
          Length = 160

 Score = 50.5 bits (120), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 42/124 (33%), Gaps = 10/124 (8%)

Query: 9   NDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDG 68
                +R   L            + +   L +A        P   V            DG
Sbjct: 47  AADQLQRSGDLA-----RLDARIEDITTRLRQA---DDAGPPPAGVVGVGSTVTVRFDDG 98

Query: 69  EVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQP 128
             +  ++          + ++  +P+G AL+G R GD++ +  P G A  + V+ L   P
Sbjct: 99  AEQTVSI-GEVTQGYDASLVTADSPLGKALMGCRPGDAVRYRTPDGEAGAV-VVSLGGAP 156

Query: 129 EAAG 132
            A G
Sbjct: 157 PAQG 160


>UniRef50_Q487U2 Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea
           34H RepID=Q487U2_COLP3
          Length = 161

 Score = 49.4 bits (117), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 18/124 (14%), Positives = 38/124 (30%), Gaps = 10/124 (8%)

Query: 7   IINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEM-PHDVVTMNSRVKFRNL 65
            + +   + + I     A             +D  +     E      + + + V+    
Sbjct: 38  SVAETQYDTLAIEASYLAEGQSKRVIEFQHAIDAYKALELIEFNSESYIALGALVQL--S 95

Query: 66  SDGEVRVRTLVYPAKMTDS-------NTQLSVMAPVGAALLGLRVGDSIHWELPGGVATH 118
           +D +      + PA             T ++  +P+G AL+G ++ D I   L       
Sbjct: 96  TDSDTNHWFFIGPAAGGFRCQLAQQNITVITPQSPMGIALIGKQLDDDIEVMLGSNKLED 155

Query: 119 LEVL 122
             V 
Sbjct: 156 YIVT 159


>UniRef50_B9X9L2 Putative uncharacterized protein n=1 Tax=bacterium Ellin514
           RepID=B9X9L2_9BACT
          Length = 159

 Score = 48.2 bits (114), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 14/127 (11%), Positives = 41/127 (32%), Gaps = 14/127 (11%)

Query: 7   IINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDV-VTMNSRVKFRNL 65
              +   +   +     A         +   +   +  +P     +  + + + V+    
Sbjct: 37  SKAENKYDTRGLEAAYLAGGQARQVKEIMESIKIYEAMAPRNFGAEEPIDLAALVELE-- 94

Query: 66  SDGEVRVRTLVYPAKMTDSNTQ-------LSVMAPVGAALLGLRVGDSIHWELP-GGVAT 117
           +DG   +  +  P                ++  +P+G+ L+G + G    W+   GG   
Sbjct: 95  ADGSRNIYFI-GPRSGGLEVNYARKEIIVITPQSPLGSNLIGKKKGQR--WKTQVGGNTI 151

Query: 118 HLEVLEL 124
           +  ++ +
Sbjct: 152 NYHIVSV 158


>UniRef50_Q6MHB9 Putative uncharacterized protein n=1 Tax=Bdellovibrio bacteriovorus
           RepID=Q6MHB9_BDEBA
          Length = 159

 Score = 47.0 bits (111), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/126 (11%), Positives = 38/126 (30%), Gaps = 8/126 (6%)

Query: 5   TIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRN 64
                + + +   +     A         +   L   +  S  +   +   ++S      
Sbjct: 35  EESKAENEYDTRGLEASYLARGQAKRIADIEEVLLLLKHLSVRDFGPND-GISSSAVIEV 93

Query: 65  LSDGEVRVRTL------VYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATH 118
             +G+     +      V       +   ++  +P+G ALL  +VG     E  G     
Sbjct: 94  EHNGKTSFFFILAKGGGVSVQFEGKTIQVVTPNSPLGEALLDQKVGGVAVVEN-GPQVRE 152

Query: 119 LEVLEL 124
            +++ +
Sbjct: 153 YDIINI 158


>UniRef50_A6DU10 Putative uncharacterized protein n=1 Tax=Lentisphaera araneosa
           HTCC2155 RepID=A6DU10_9BACT
          Length = 156

 Score = 46.3 bits (109), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 38/120 (31%), Gaps = 7/120 (5%)

Query: 8   INDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEM-PHDVVTMNSRVKFRNLS 66
           I     +   I         +     L AE+   Q              +++ +K  + S
Sbjct: 38  IAKSKYDTKSIEAAYLVEGQIKRNGELEAEIAAYQAMRIRSFGKKSRALLSALIKLEDES 97

Query: 67  DGEVRVRTLVYPAKMTDSNT---QLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLE 123
              + +     P            ++  +P+G ALLG   GD +  EL  G      VL+
Sbjct: 98  GQTIDLFM--GPQAGGMIIEGVQVITPPSPLGQALLGKYCGDEVSLELE-GKIQKYRVLD 154


>UniRef50_B1ZZ43 Putative uncharacterized protein n=1 Tax=Opitutus terrae PB90-1
           RepID=B1ZZ43_OPITP
          Length = 159

 Score = 45.9 bits (108), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/123 (13%), Positives = 37/123 (30%), Gaps = 12/123 (9%)

Query: 9   NDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPH-DVVTMNSRVKFRNLSD 67
            +   +         A     +A  +   +   +  +  ++P    V + + V      D
Sbjct: 39  PENQYDTHSQEAAYLAEGQARLAAEIAESITLYESLNLPDLPAASPVALGALVAL---DD 95

Query: 68  GEVRVRTLVYPAKMTDSNTQ-------LSVMAPVGAALLGLRVGDSIHWELP-GGVATHL 119
              +    + P                L+  +P+G  L+G RV D +       G    +
Sbjct: 96  RGRQSWFFIGPRGGGLELQVEGRNVLVLTPQSPLGRELMGKRVDDLVRLPNRVNGAPQRI 155

Query: 120 EVL 122
            ++
Sbjct: 156 TLV 158


>UniRef50_A0YBQ5 Putative uncharacterized protein n=1 Tax=marine gamma
           proteobacterium HTCC2143 RepID=A0YBQ5_9GAMM
          Length = 158

 Score = 45.9 bits (108), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/126 (14%), Positives = 39/126 (30%), Gaps = 11/126 (8%)

Query: 8   INDLDAERIDILLEQPAYAGLPIADALNAELDRAQMC-SPEEMPHDVVTMNSRVKFRNLS 66
           I D   + + +     A+        L   +   Q    P       + + + V   N  
Sbjct: 36  IADNKYDTLAVEAAYLAHGQSMRIAQLQQFISLYQHYQRPIFNNQSAIQVGALVCVENEQ 95

Query: 67  DGEVRVRTLVYPAKMTDSNT-------QLSVMAPVGAALLGLRVGDSIHWELPGGVATHL 119
             + R+   + PA    S +        ++   P+   L+   V D +  E+        
Sbjct: 96  KQQSRLF--IGPAAGGLSISSQWGLVQVITPTTPLARLLISKYVDDEVDSEI-NQRKVCF 152

Query: 120 EVLELE 125
            ++ +E
Sbjct: 153 RIVSIE 158


>UniRef50_B2A7T5 Putative uncharacterized protein n=1 Tax=Natranaerobius
           thermophilus JW/NM-WN-LF RepID=B2A7T5_NATTJ
          Length = 303

 Score = 44.0 bits (103), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 29/73 (39%), Gaps = 4/73 (5%)

Query: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWEL-- 111
           +T+  +V  ++L D  +    L            +S  +PVG  L+G   G+ I  E+  
Sbjct: 95  ITIEDQVTIKDLLDDNIFQFKL-TENNKDTEIKTISPKSPVGQKLIGKTYGEIIEVEVST 153

Query: 112 -PGGVATHLEVLE 123
                    +VL+
Sbjct: 154 IGKKELNKYKVLD 166


>UniRef50_A9G528 Putative uncharacterized protein n=1 Tax=Sorangium cellulosum 'So
           ce 56' RepID=A9G528_SORC5
          Length = 167

 Score = 43.6 bits (102), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/117 (19%), Positives = 35/117 (29%), Gaps = 7/117 (5%)

Query: 9   NDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDG 68
            + D +         A         +   L R    +  +       + S       S  
Sbjct: 47  AEGDKDMRATEASYVARGHSERVLQIEQALARLGAVTVRDFGPG-AGIESSALVELESGK 105

Query: 69  EVRVRTLVYPAKM------TDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHL 119
              +  L+  A              L+  +P+GA+LLGL  GD      P G  THL
Sbjct: 106 RRALYFLLPAAGGERIQFQGVELQTLATTSPLGASLLGLSEGDEAEVATPQGTRTHL 162


>UniRef50_A5F491 Putative uncharacterized protein n=31 Tax=Vibrio RepID=A5F491_VIBC3
          Length = 163

 Score = 43.6 bits (102), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/81 (16%), Positives = 27/81 (33%), Gaps = 1/81 (1%)

Query: 46  PEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGD 105
           P E     + +   V   +         TL       +    ++  + +GAALLG R  +
Sbjct: 67  PIERAPQRIKLGDTVSLVDAHRQLSFQVTLTTSENQHEVQGGVTCDSLLGAALLGRRQHE 126

Query: 106 SIHWELPGGVATHLEVLELEY 126
                +  G      +  +++
Sbjct: 127 VFTLSI-WGQPHCFAITHVQH 146


>UniRef50_C0BIS2 GreA/GreB family elongation factor n=1 Tax=Flavobacteria bacterium
           MS024-2A RepID=C0BIS2_9BACT
          Length = 148

 Score = 42.8 bits (100), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/100 (18%), Positives = 36/100 (36%), Gaps = 18/100 (18%)

Query: 31  ADALNA---ELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYP-AKMTDSNT 86
              L     +L+  +           V++ S V    L+D E    ++     ++     
Sbjct: 62  IAELEQNQQKLNTLK----NHKTTTSVSLGSVV----LTDKENYYISIATNFCEIDAKKY 113

Query: 87  Q-LSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
             +S  +P+G  L+G +V D I +           +LE+ 
Sbjct: 114 YCISAQSPIGKLLIGKKVNDKIEFN-----KRLSTILEIR 148


>UniRef50_A9EK60 Transcription elongation factor n=1 Tax=Shewanella benthica KT99
           RepID=A9EK60_9GAMM
          Length = 194

 Score = 42.0 bits (98), Expect = 0.005,   Method: Composition-based stats.
 Identities = 16/155 (10%), Positives = 40/155 (25%), Gaps = 39/155 (25%)

Query: 7   IINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEE-MPHDVVTMNSRVKFRNL 65
            +     E   +     A+           EL   +  +    +    + +++ V   + 
Sbjct: 43  TVAKSKYETFGLEASYLAHGQAQRVAECEVELSGYRSLNLACFLDDSAIDLSALVSLEDE 102

Query: 66  SDGEVRVRTLVYPAK------------MTDSNTQ-----------------------LSV 90
             G      +  P              +     +                       ++ 
Sbjct: 103 L-GIENTYFI-GPGAPGMKISLEIDKNIDLETDKNTDIDLAAVCHKNSNKEQLMITVITP 160

Query: 91  MAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
            +P+G  L+G  + DS+   + G      E+  +E
Sbjct: 161 SSPLGQLLMGKYLDDSVRLNI-GEQPKVYEITGVE 194


>UniRef50_UPI0000E0F7E8 hypothetical protein GHTCC_05724 n=1 Tax=Glaciecola sp. HTCC2999
           RepID=UPI0000E0F7E8
          Length = 84

 Score = 42.0 bits (98), Expect = 0.006,   Method: Composition-based stats.
 Identities = 15/81 (18%), Positives = 31/81 (38%), Gaps = 10/81 (12%)

Query: 50  PHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNT-------QLSVMAPVGAALLGLR 102
             D++T+ + V+  + +  E  +   + P                +S  +P+G  LLG  
Sbjct: 5   DIDIITIGALVEIIDQN--ETSLWVFLAPVSGGIKFEFKQRKIMVISTHSPLGKQLLGKE 62

Query: 103 VGDSIHWELPGGVATHLEVLE 123
            GD +   L    +T   + +
Sbjct: 63  TGDELSIGLGA-RSTQYRITD 82


>UniRef50_D1SQ94 Putative uncharacterized protein n=1 Tax=Acidovorax avenae subsp.
           avenae ATCC 19860 RepID=D1SQ94_9BURK
          Length = 1383

 Score = 41.7 bits (97), Expect = 0.008,   Method: Composition-based stats.
 Identities = 20/96 (20%), Positives = 29/96 (30%), Gaps = 3/96 (3%)

Query: 32  DALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDS--NTQLS 89
             L A +   Q     E     V   + V  +N   GE    +L              L+
Sbjct: 771 AYLIAIIAGPQELPFMEEELTEVQPGTAVTLKNEL-GETVTLSLDPAGLSGLPVREGMLA 829

Query: 90  VMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELE 125
               V  +LLG+ VG  +    P G      V  + 
Sbjct: 830 PSDDVARSLLGVAVGQQVSLPGPFGTELRFVVEGVT 865


>UniRef50_A2TUB1 Putative uncharacterized protein n=1 Tax=Dokdonia donghaensis
           MED134 RepID=A2TUB1_9FLAO
          Length = 152

 Score = 41.7 bits (97), Expect = 0.008,   Method: Composition-based stats.
 Identities = 15/99 (15%), Positives = 36/99 (36%), Gaps = 11/99 (11%)

Query: 14  ERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVR 73
             + +  E          + L     R ++    ++    V + S V    ++       
Sbjct: 53  AMLQLERENAGKQLAA-IEKLEQIFLRIKL----DLSEGPVHLGSVV----VTSQACYFI 103

Query: 74  TL-VYPAKMT-DSNTQLSVMAPVGAALLGLRVGDSIHWE 110
           ++ V   K+   +   + + +P+G  L+G R GD + + 
Sbjct: 104 SIPVGAIKVDGLTFYAIGIGSPIGQLLMGKREGDEVRFR 142


>UniRef50_D1QR39 Putative uncharacterized protein n=1 Tax=Prevotella oris F0302
           RepID=D1QR39_9BACT
          Length = 1194

 Score = 40.1 bits (93), Expect = 0.021,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 25/57 (43%), Gaps = 1/57 (1%)

Query: 69  EVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELP-GGVATHLEVLEL 124
           E+    L+  A       +++  +P+G A++G +  D +   L        ++V+ +
Sbjct: 744 EIGQYVLIEYANGDRKVYRITSDSPLGIAVIGKKANDIVEVNLDYSRRKRKVKVIGI 800


>UniRef50_UPI00017450EA transcription elongation factor n=1 Tax=Verrucomicrobium spinosum
           DSM 4136 RepID=UPI00017450EA
          Length = 159

 Score = 39.7 bits (92), Expect = 0.029,   Method: Composition-based stats.
 Identities = 13/124 (10%), Positives = 31/124 (25%), Gaps = 12/124 (9%)

Query: 9   NDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDV-VTMNSRVKFRNLSD 67
            +   +   +     A             L   +      +       + + V+      
Sbjct: 39  AENKYDTRSLEASYLARGQAMRVAETEEALVAYRALRCRPLEAGEPAALGALVQLTGPEG 98

Query: 68  GEVRVRTLVYPAKMTDSNTQ-------LSVMAPVGAALLGLRVGDSIHWELPGGVATHLE 120
             V    L  P                ++  +P+G  L+G +VG  +            +
Sbjct: 99  --VSCYFL-GPTAGGTEVQHEGREILVITPSSPLGQLLVGAKVGSQVVLPGGRSGQRS-Q 154

Query: 121 VLEL 124
           V+ +
Sbjct: 155 VVAV 158


>UniRef50_Q0HPS7 GreA/GreB family elongation factor n=4 Tax=Gammaproteobacteria
          RepID=Q0HPS7_SHESR
          Length = 56

 Score = 39.3 bits (91), Expect = 0.042,   Method: Composition-based stats.
 Identities = 7/27 (25%), Positives = 9/27 (33%)

Query: 3  RPTIIINDLDAERIDILLEQPAYAGLP 29
          RP I +   +A       E   Y   P
Sbjct: 26 RPQITLKVQEAAAQGDRSENADYRKDP 52


>UniRef50_C6X1H7 Putative uncharacterized protein n=2 Tax=Flavobacteriaceae
           RepID=C6X1H7_FLAB3
          Length = 149

 Score = 39.0 bits (90), Expect = 0.046,   Method: Composition-based stats.
 Identities = 18/107 (16%), Positives = 32/107 (29%), Gaps = 10/107 (9%)

Query: 7   IINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLS 66
           I      + I   +++  Y       ALN              P + V + S V      
Sbjct: 40  IKKTPKYDSIREEIQEEIYRMQRQLGALNDMQRNMTKVLNS--PTERVQIGSVVF----- 92

Query: 67  DGEVRVRTLVYPAKMTDSNTQ---LSVMAPVGAALLGLRVGDSIHWE 110
             + R    V   +      +   +S  +P+   + G + GDS    
Sbjct: 93  TNKARFYISVSLGEFFFEGDRFYAISEESPMAKTMFGKQAGDSFVLN 139


>UniRef50_A0M6P4 Transcription elongation factor n=1 Tax=Gramella forsetii KT0803
           RepID=A0M6P4_GRAFK
          Length = 151

 Score = 38.6 bits (89), Expect = 0.071,   Method: Composition-based stats.
 Identities = 20/99 (20%), Positives = 34/99 (34%), Gaps = 23/99 (23%)

Query: 32  DALNAELDRAQMCSPEEMPHDVVTMNSRVK------FRNLSDGEVRVRTLVYPAKMTDSN 85
           + L+  L R +    +  P D V + S V       F ++  GE++              
Sbjct: 69  ERLSQILKRIE----DHKPTDKVVLGSVVMTNAANYFISIPAGEIK--------AANQKC 116

Query: 86  TQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLEL 124
             + V AP+   LLG   GD               +L++
Sbjct: 117 YAVGVKAPISQQLLGKEEGDQFTING-----KDFRILDI 150


  Database: uniref50.fasta
    Posted date:  Mar 8, 2010 10:38 AM
  Number of letters in database: 1,040,396,356
  Number of sequences in database:  3,077,464
  
Lambda     K      H
   0.313    0.167    0.468 

Lambda     K      H
   0.267   0.0507    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,168,912,934
Number of Sequences: 3077464
Number of extensions: 62831091
Number of successful extensions: 222384
Number of sequences better than 1.0e-01: 368
Number of HSP's better than  0.1 without gapping: 944
Number of HSP's successfully gapped in prelim test: 140
Number of HSP's that attempted gapping in prelim test: 220341
Number of HSP's gapped (non-prelim): 1118
length of query: 136
length of database: 1,040,396,356
effective HSP length: 101
effective length of query: 35
effective length of database: 729,572,492
effective search space: 25535037220
effective search space used: 25535037220
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.1 bits)
S2: 88 (38.2 bits)
