Phyre 2 alignment of P21345 with c2ihnA_

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Job Description | P21345
Confidence | 2.71% | Date | Thu Jan 5 11:38:04 GMT 2012
Rank | 85 | Aligned Residues | 28
% Identity | 18% | Template | c2ihnA_
PDB info | PDB header:hydrolase/dna | Chain: A: PDB Molecule:ribonuclease h; | PDBTitle: co-crystal of bacteriophage t4 rnase h with a fork dna2 substrate
Resolution | 3.00 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 331 | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | Y | G | I | D | L | S | I | W | Q | E | I | I | L | V | L | T | L | M | V | T | S | K | G | I | A | G | V | P | G | V | S
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | S | G | . | . | . | S | A | E | I | D | C | M | T | K | I | L | K | G | D | K | K | D | N | V | A | S | V | K | V | R | S
Template Known Secondary structure |  | S | S | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  | B | G | G | G | T | B |  |  | T | T | S |  | T
Template Predicted Secondary structure |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 182 | . |  |  |  | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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