Phyre 2 alignment of P21345 with d1a77a1

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Job Description | P21345
Confidence | 48.33% | Date | Thu Jan 5 11:38:04 GMT 2012
Rank | 2 | Aligned Residues | 38
% Identity | 21% | Template | d1a77a1
SCOP info | SAM domain-like | 5' to 3' exonuclease, C-terminal subdomain | 5' to 3' exonuclease, C-terminal subdomain
Resolution | 2.00

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 335 | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | L | S | I | W | Q | E | I | I | L | V | L | T | L | M | V | T | S | K | G | I | A | G | V | P | G | V | S | F | V | V | L | L | A | T | L | G | S | V | G
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | I | S | L | D | D | L | I | D | I | A | I | F | M | G | . | T | D | Y | N | P | G | G | V | K | G | I | G | F | K | R | A | Y | E | L | V | R | S | G | V
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  | T | T | S | T | T |  | S | T | T |  |  |  |  |  |  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 209 | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . |  | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | .

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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