Job Description P42628 Confidence 1.99% Date Thu Jan 5 12:01:58 GMT 2012 Rank 94 Aligned Residues 31 % Identity 23% Template c2r5iL_ PDB info PDB header:viral protein Chain: L: PDB Molecule:l1 protein; PDBTitle: pentamer structure of major capsid protein l1 of human2 papilloma virus type 18 Resolution 3.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	K	G	V	I	A	D	A	S	T	P	A	G	R	A	G	M	S	E	S	E	W	R	E	A	I	K	F	D	S	T	D	T
Query Conservation
Alig confidence																	.	.
Template Conservation																	.	.
Template Sequence		N	K	L	D	D	T	E	S	S	H	A	A	T	S	N	.	.	V	S	E	D	V	R	D	N	V	S	V	D	Y	K	Q	T
Template Known Secondary structure						B	T	T	T		S	S	S				.	.	T	T	S
Template Predicted Secondary structure																	.	.
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.			.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions