BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (132 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_Q46795 Putative uncharacterized protein ygeO (Fragment)... 168 7e-41 UniRef50_Q7NVC4 Probable oxygen-regulated invasion protein; cell... 128 6e-29 UniRef50_P58653 Oxygen-regulated invasion protein orgA n=34 Tax=... 125 4e-28 UniRef50_C4K5N1 Oxygen-regulated invasion protein n=1 Tax=Candid... 114 8e-25 UniRef50_C2LLV9 Type III secretion system protein (Oxygen-regula... 111 1e-23 UniRef50_Q6R8A2 OrgA n=2 Tax=Sodalis glossinidius RepID=Q6R8A2_S... 110 1e-23 UniRef50_C7E4S2 Oxygen-regulated invasion protein n=1 Tax=Pantoe... 99 4e-20 UniRef50_C4I6M4 Type III secretion apparatus protein OrgA/MxiK n... 93 3e-18 UniRef50_Q6R8E4 Orf5 n=2 Tax=Sodalis glossinidius RepID=Q6R8E4_S... 92 6e-18 UniRef50_C0AR78 Putative uncharacterized protein n=1 Tax=Proteus... 88 7e-17 UniRef50_B2VID4 Oxygen-regulated invasion protein n=1 Tax=Erwini... 64 1e-09 UniRef50_D0FT12 Oxygen-regulated invasion protein n=2 Tax=Erwini... 64 1e-09 UniRef50_D2UDE2 Probable oxygen-regulated invasion protein orga ... 54 1e-06 UniRef50_D2TZ25 Type III secretion apparatus protein OrgA,MxiK n... 53 2e-06 UniRef50_Q93RD2 EorA protein n=20 Tax=Escherichia coli RepID=Q93... 48 1e-04 UniRef50_D2TZU4 Type III secretion system protein (Oxygen-regula... 47 2e-04 UniRef50_B1FB91 Type III secretion apparatus protein OrgA/MxiK n... 38 0.094 >UniRef50_Q46795 Putative uncharacterized protein ygeO (Fragment) n=8 Tax=Escherichia RepID=YGEO_ECOLI Length = 132 Score = 168 bits (424), Expect = 7e-41, Method: Composition-based stats. Identities = 132/132 (100%), Positives = 132/132 (100%) Query: 1 INNWNLLPLICLLSGCHFYRERFAERGFFYKVPDVLRDYLSAIPLEINEKARYKPGIANY 60 INNWNLLPLICLLSGCHFYRERFAERGFFYKVPDVLRDYLSAIPLEINEKARYKPGIANY Sbjct: 1 INNWNLLPLICLLSGCHFYRERFAERGFFYKVPDVLRDYLSAIPLEINEKARYKPGIANY 60 Query: 61 HNIITCGFSTLLPYIRQQPLAMQQRFNLLFPDFVDHIQSPLPLASTLLERITFYAKKNRD 120 HNIITCGFSTLLPYIRQQPLAMQQRFNLLFPDFVDHIQSPLPLASTLLERITFYAKKNRD Sbjct: 61 HNIITCGFSTLLPYIRQQPLAMQQRFNLLFPDFVDHIQSPLPLASTLLERITFYAKKNRD 120 Query: 121 ELDKISCKWCCD 132 ELDKISCKWCCD Sbjct: 121 ELDKISCKWCCD 132 >UniRef50_Q7NVC4 Probable oxygen-regulated invasion protein; cell invasion protein n=1 Tax=Chromobacterium violaceum RepID=Q7NVC4_CHRVO Length = 192 Score = 128 bits (321), Expect = 6e-29, Method: Composition-based stats. Identities = 37/125 (29%), Positives = 55/125 (44%), Gaps = 2/125 (1%) Query: 1 INNWNLLPLICLLSGCHFYRERFAERGFFYKVPDVLRDYLSAIPLEINEKARYKPGIANY 60 + W+ LP L GC R R A RG ++P R + +A+ + A + Sbjct: 66 LAEWHRLPQAAYLMGCQLLRARLAARGGLLRLPGWARGF-AAMQIGAEWPAAPLDEAPGH 124 Query: 61 HNIITCGFSTLLPYIRQQPLAMQQRFNLLFPDFVDHIQSPLPLASTLLE-RITFYAKKNR 119 I+ GF LL + + P A+ QR LLFP +VD +P +TLL YAK++ Sbjct: 125 DAILLAGFGQLLSWRERMPEALAQRLPLLFPAWVDEASPCIPAQNTLLLTLALQYAKRHP 184 Query: 120 DELDK 124 Sbjct: 185 HFPPS 189 >UniRef50_P58653 Oxygen-regulated invasion protein orgA n=34 Tax=Salmonella enterica RepID=ORGA_SALTY Length = 199 Score = 125 bits (314), Expect = 4e-28, Method: Composition-based stats. Identities = 30/127 (23%), Positives = 55/127 (43%), Gaps = 3/127 (2%) Query: 1 INNWNLLPLICLLSGCHFYRERFAERGFFYKVPDVLRDYLSAIPLEINEKARYKPGIANY 60 + W LP + L GCH R A +G +PD + +L+ + N+ Sbjct: 76 LRQWRRLPQVAYLLGCHKLRADLARQGALLGLPDWAQAFLA---MHQGTSLSVCNKAPNH 132 Query: 61 HNIITCGFSTLLPYIRQQPLAMQQRFNLLFPDFVDHIQSPLPLASTLLERITFYAKKNRD 120 +++ G++ L P ++ QRF LLFP F++ + ++L YA+K + Sbjct: 133 RFLLSVGYAQLNALNEFLPESLAQRFPLLFPPFIEEALKQDAVEMSILLLALQYAQKYPN 192 Query: 121 ELDKISC 127 + +C Sbjct: 193 TVPAFAC 199 >UniRef50_C4K5N1 Oxygen-regulated invasion protein n=1 Tax=Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum) RepID=C4K5N1_HAMD5 Length = 192 Score = 114 bits (285), Expect = 8e-25, Method: Composition-based stats. Identities = 24/125 (19%), Positives = 52/125 (41%), Gaps = 5/125 (4%) Query: 1 INNWNLLPLICLLSGCHFYRERFAERGFFYKVPDVLRDYLSAIPLEINEKARYKPGIANY 60 + +W LP I + C +R ++G ++P ++ + + + + ++ + N+ Sbjct: 65 LTHWFYLPQIAFIMACQRHRTILLKKGMLLRLPLWVQQF-AKLEMVEALPYQFNQKM-NF 122 Query: 61 HNIITCGFSTLLPYIRQQPLAMQQRFNLLFPDFVDHIQSPLPLASTLLE---RITFYAKK 117 ++ G L + ++ P A+ QR LFP ++ + S L + KK Sbjct: 123 LQLLAYGAKELSLWEKELPGAISQRMPFLFPFSMNAVLDFDRKISPNLLFINLAIQHVKK 182 Query: 118 NRDEL 122 N L Sbjct: 183 NPQSL 187 >UniRef50_C2LLV9 Type III secretion system protein (Oxygen-regulated invasion protein) n=2 Tax=Proteus mirabilis RepID=C2LLV9_PROMI Length = 190 Score = 111 bits (276), Expect = 1e-23, Method: Composition-based stats. Identities = 27/118 (22%), Positives = 44/118 (37%), Gaps = 5/118 (4%) Query: 2 NNWNLLPLICLLSGCHFYRERFAERGFFYKVPDVLRDYLSAIPLEINEKARYKPGIANYH 61 +W+ LP L G + R + +++ P L+ +L+ P+ Sbjct: 70 THWHTLPRCALFLGYFYSRHTLLAQNYYHLEPA-LKAFLALYPMLNRTVDSKILLSLKDI 128 Query: 62 NIITCGFSTLLPYIRQQPLAMQQRFNLLFPD----FVDHIQSPLPLASTLLERITFYA 115 I G+ L +I+ A+ QRF LLF L L+ TL + YA Sbjct: 129 APIDIGYQLLFNFIKLISNALAQRFKLLFSPKSLSINIEFPKSLVLSPTLFLLVLNYA 186 >UniRef50_Q6R8A2 OrgA n=2 Tax=Sodalis glossinidius RepID=Q6R8A2_SODGL Length = 199 Score = 110 bits (275), Expect = 1e-23, Method: Composition-based stats. Identities = 34/128 (26%), Positives = 56/128 (43%), Gaps = 6/128 (4%) Query: 1 INNWNLLPLICLLSGCHFYRERFAERGFFYKVPDVLRDYLSAIPLEINEKARYKPGIANY 60 + W+LLP I LL C +R A+ G+ +PD LR + + ++ ++ I Sbjct: 64 VEAWHLLPQIALLMACQRHRASLAKGGYGASLPDWLRQFAALS--LVSSRSSPGETIPPP 121 Query: 61 HNIITCGFSTLLPYIRQQPLAMQQRFNLLFPDFV---DHIQSPLPLASTLLE-RITFYAK 116 ++ G LL + P ++QR +LLFP D + LP LL +AK Sbjct: 122 AQLLAWGKYELLAFAGSLPRGLRQRLDLLFPPEEGRDDLSRLSLPPPCRLLLKLAFQHAK 181 Query: 117 KNRDELDK 124 ++ D Sbjct: 182 RHPATPDT 189 >UniRef50_C7E4S2 Oxygen-regulated invasion protein n=1 Tax=Pantoea stewartii subsp. stewartii DC283 RepID=C7E4S2_ERWST Length = 185 Score = 99.1 bits (245), Expect = 4e-20, Method: Composition-based stats. Identities = 32/123 (26%), Positives = 47/123 (38%), Gaps = 10/123 (8%) Query: 1 INNWNLLPLICLLSGCHFYRERFAERGFFYKVPDVLRDYLSAIPLEINEKARYKPGIANY 60 ++ W+L+P L G + R +R L + I L + + PG N Sbjct: 67 LSCWHLIPETAHLIGGYLMRSHLLKRAALLMSDPRLLAF---ISLPMPHRIALDPGDQNS 123 Query: 61 HNIITCGFSTLLPYIRQQPLAMQQRFNLLFPDFVDHIQSPLPLAST-----LLERITFYA 115 +CG + +L P A++QR L FP + PLP T LL YA Sbjct: 124 MATTSCGLAFILSQFPGLPQALRQRLLLSFPAGM--SIEPLPAGKTLNHINLLRMALTYA 181 Query: 116 KKN 118 K Sbjct: 182 KHY 184 >UniRef50_C4I6M4 Type III secretion apparatus protein OrgA/MxiK n=29 Tax=pseudomallei group RepID=C4I6M4_BURPS Length = 200 Score = 92.9 bits (229), Expect = 3e-18, Method: Composition-based stats. Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 2/91 (2%) Query: 1 INNWNLLPLICLLSGCHFYRERFAERGFFYKVPDVLRDYLSAIPLEINEKARYKPGIANY 60 +++W LP I L G R ERG + ++ + +L +PL KA G+ + Sbjct: 70 VDHWARLPRIAYLIGVQRLRAALVERGQYVRLDASSQRFLC-MPLAAVPKAACA-GMPDD 127 Query: 61 HNIITCGFSTLLPYIRQQPLAMQQRFNLLFP 91 I+ G + L + P A++QR LLFP Sbjct: 128 DAIVAAGTACLTAALHDAPRALRQRLPLLFP 158 >UniRef50_Q6R8E4 Orf5 n=2 Tax=Sodalis glossinidius RepID=Q6R8E4_SODGL Length = 195 Score = 91.8 bits (226), Expect = 6e-18, Method: Composition-based stats. Identities = 28/128 (21%), Positives = 46/128 (35%), Gaps = 15/128 (11%) Query: 1 INNWNLLPLICLLSGCHFYRERFAERGFFYKVPDVLRDYLSAIPL---------EINEKA 51 ++NW L LL G H R R G F + ++ +L+ E E A Sbjct: 67 LDNWQRLGDAALLIGAHLLRNRLLSEGRFILLSAPVQSFLALPLPPLTPGALPQEQEEPA 126 Query: 52 RYKPGIANYHNIITCGFSTLLPYIRQQPLAMQQRFNLLFP---DFVDHIQSPLPLASTLL 108 + G LL +++ A+ +R LLFP S P + L+ Sbjct: 127 TTLLQDPDPA---AWGAYCLLSMLKRLSPAVYRRACLLFPVEQPLPQQATSLSPSSINLI 183 Query: 109 ERITFYAK 116 + +A+ Sbjct: 184 KMALHHAQ 191 >UniRef50_C0AR78 Putative uncharacterized protein n=1 Tax=Proteus penneri ATCC 35198 RepID=C0AR78_9ENTR Length = 188 Score = 88.3 bits (217), Expect = 7e-17, Method: Composition-based stats. Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 2/90 (2%) Query: 2 NNWNLLPLICLLSGCHFYRERFAERGFFYKVPDVLRDYLSAIPLEINEKARYKPGIANYH 61 W+LLP L G + + G +Y++P L+ +LS P+ + + Sbjct: 71 TQWSLLPQCALFLGYFYSPQYILHSGDYYQLPSSLQAFLSLRPVILINEENKNDNN--EI 128 Query: 62 NIITCGFSTLLPYIRQQPLAMQQRFNLLFP 91 IT G+ L +I +A+ QRF L FP Sbjct: 129 APITIGYQLLFTFIHSISVALAQRFKLCFP 158 >UniRef50_B2VID4 Oxygen-regulated invasion protein n=1 Tax=Erwinia tasmaniensis RepID=B2VID4_ERWT9 Length = 178 Score = 64.4 bits (155), Expect = 1e-09, Method: Composition-based stats. Identities = 26/123 (21%), Positives = 45/123 (36%), Gaps = 7/123 (5%) Query: 1 INNWNLLPLICLLSGCHFYRERFAERGFFYKVPDVLRDYLSAIPLEINEKARYKPGIANY 60 ++ W L+ L G + R R ++ + L ++S + Sbjct: 60 LDKWELINDAACLIGGYLLRSRILKQCTEIILNPRLSSFISLPIPHHVSLTTTGE----H 115 Query: 61 HNIITCGFSTLLPYIRQQPLAMQQRFNLLFPD---FVDHIQSPLPLASTLLERITFYAKK 117 N ++ G + +L I PLA+++R L P D + P LL YAK Sbjct: 116 SNTLSLGLAFILSQIPHFPLALKERVLLFLPAEIDLPDTFIARNPNHLNLLTMALNYAKN 175 Query: 118 NRD 120 R+ Sbjct: 176 YRE 178 >UniRef50_D0FT12 Oxygen-regulated invasion protein n=2 Tax=Erwinia pyrifoliae RepID=D0FT12_ERWPY Length = 184 Score = 64.0 bits (154), Expect = 1e-09, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 39/121 (32%), Gaps = 7/121 (5%) Query: 1 INNWNLLPLICLLSGCHFYRERFAERGFFYKVPDVLRDYLSAIPLEINEKARYKPGIANY 60 + W +P+ L G + R R + L ++S + + Sbjct: 67 LTQWEHMPVTAHLVGGYLLRARLLSQCAVLMSDSRLLAFISLPLI----PHISSLTLPRS 122 Query: 61 HNIITCGFSTLLPYIRQQPLAMQQRFNLLFPD---FVDHIQSPLPLASTLLERITFYAKK 117 + I G + +L IR PLA+ +R + FP LL+ YA Sbjct: 123 VDTIALGVAFILSQIRPLPLALMRRLLMSFPTDIKLPQLHIERTLGHHNLLKMAINYAIH 182 Query: 118 N 118 Sbjct: 183 F 183 >UniRef50_D2UDE2 Probable oxygen-regulated invasion protein orga n=1 Tax=Xanthomonas albilineans RepID=D2UDE2_XANAL Length = 198 Score = 54.0 bits (128), Expect = 1e-06, Method: Composition-based stats. Identities = 22/130 (16%), Positives = 44/130 (33%), Gaps = 17/130 (13%) Query: 1 INNWNLLPLICLLSGCHFYRERFAERGFFYKVPDVLRDYLSAIPLEINEKARYKPGIANY 60 + W ++P +C L G R + + ++ + ++ + A + Sbjct: 66 LRKWYVIPDLCFLLGLFSQRGEWLSSNRYRQLDGRCKRFIELPLPHLAVPACVLDENVDP 125 Query: 61 HNIITCGFSTLLPYIRQQPLAMQQRFNLLFPDFVDHIQSPLPL--------------AST 106 + CG + L I P + +R LLF ++ + L L + T Sbjct: 126 ---VVCGLAALRFLIPAMPPVIDERLRLLFSSRIEAETAALSLQVGRASPEDCGRWISIT 182 Query: 107 LLERITFYAK 116 L YA+ Sbjct: 183 LFSMAAHYAQ 192 >UniRef50_D2TZ25 Type III secretion apparatus protein OrgA,MxiK n=1 Tax=Arsenophonus nasoniae RepID=D2TZ25_9ENTR Length = 182 Score = 53.2 bits (126), Expect = 2e-06, Method: Composition-based stats. Identities = 20/120 (16%), Positives = 42/120 (35%), Gaps = 4/120 (3%) Query: 1 INNWNLLPLICLLSGCHFYRERFAERGFFYKVPDVLRDYLSAIPLEINEKARYKPGIANY 60 I NWN++ + + C YR G K+ + +R++ ++ Sbjct: 64 IKNWNVILEVSFMLACLRYRSLLFRSGKIVKLDESIRNFCELNIIDDFVFVAKNNFSDID 123 Query: 61 HNIITCGFSTLLPYIRQQPLAMQQRFNLLFPDFVDHIQSP--LPLASTLLERITFYAKKN 118 ++ + Y + +R +LFP + + + LL+ YAK+ Sbjct: 124 LWLLA--RKEIYIYQDYLSDTVMKRLAILFPRIDNDDYNFAKINPQFNLLKLAVQYAKRY 181 >UniRef50_Q93RD2 EorA protein n=20 Tax=Escherichia coli RepID=Q93RD2_ECOLX Length = 96 Score = 47.8 bits (112), Expect = 1e-04, Method: Composition-based stats. Identities = 25/32 (78%), Positives = 26/32 (81%) Query: 1 INNWNLLPLICLLSGCHFYRERFAERGFFYKV 32 INNWNL PL CL SG HFYRERFAERGFF + Sbjct: 62 INNWNLFPLFCLFSGYHFYRERFAERGFFIRF 93 >UniRef50_D2TZU4 Type III secretion system protein (Oxygen-regulated invasion protein) n=1 Tax=Arsenophonus nasoniae RepID=D2TZU4_9ENTR Length = 185 Score = 47.5 bits (111), Expect = 2e-04, Method: Composition-based stats. Identities = 32/121 (26%), Positives = 52/121 (42%), Gaps = 6/121 (4%) Query: 1 INNWNLLPLICLLSGCHFYRERFAERGFFYKVPDVLRDYLS-AIPLEINEKARYKPGIAN 59 IN W+ LP+ L G + + ++P+ +LS A L +K + P IA Sbjct: 61 INYWSRLPIAALYLGGLYQSPQLMIANQLTQLPEQFSQFLSWARLLLPPQKKQIVPLIAT 120 Query: 60 Y---HNIITCGFSTLLPYIRQQPLAMQQRFNLLFPDFVD--HIQSPLPLASTLLERITFY 114 + CG ++P I + LA+ RF+LLF + LP+ +LL+ Y Sbjct: 121 SYSQDELTKCGMWAIIPLIEKCSLALTARFSLLFNKNYPQCQANTVLPVNYSLLKATLNY 180 Query: 115 A 115 Sbjct: 181 V 181 >UniRef50_B1FB91 Type III secretion apparatus protein OrgA/MxiK n=1 Tax=Burkholderia ambifaria IOP40-10 RepID=B1FB91_9BURK Length = 192 Score = 37.8 bits (86), Expect = 0.094, Method: Composition-based stats. Identities = 23/89 (25%), Positives = 34/89 (38%), Gaps = 2/89 (2%) Query: 4 WNLLPLICLLSGCHFYRERFAERGFFYKVPDVLRDYLSAIPLEINEKARYKPGIANYHNI 63 W L IC L G R E+ ++ K+ + R +L A P +I Sbjct: 67 WAHLRRICYLIGVLRLRSPIIEQAWYPKLDALARQFLQVPAP--ALPAAESPLRLEQADI 124 Query: 64 ITCGFSTLLPYIRQQPLAMQQRFNLLFPD 92 G + R+ P A++ R LLFP Sbjct: 125 YAAGSAGFAAVFRRMPAALRLRLPLLFPA 153 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q46795 Putative uncharacterized protein ygeO (Fragment)... 149 3e-35 UniRef50_P58653 Oxygen-regulated invasion protein orgA n=34 Tax=... 122 2e-27 UniRef50_Q7NVC4 Probable oxygen-regulated invasion protein; cell... 121 8e-27 UniRef50_D2TZ25 Type III secretion apparatus protein OrgA,MxiK n... 108 5e-23 UniRef50_Q6R8A2 OrgA n=2 Tax=Sodalis glossinidius RepID=Q6R8A2_S... 105 3e-22 UniRef50_B2VID4 Oxygen-regulated invasion protein n=1 Tax=Erwini... 105 5e-22 UniRef50_C7E4S2 Oxygen-regulated invasion protein n=1 Tax=Pantoe... 102 5e-21 UniRef50_C4K5N1 Oxygen-regulated invasion protein n=1 Tax=Candid... 101 6e-21 UniRef50_D0FT12 Oxygen-regulated invasion protein n=2 Tax=Erwini... 100 3e-20 UniRef50_C2LLV9 Type III secretion system protein (Oxygen-regula... 98 7e-20 UniRef50_D2UDE2 Probable oxygen-regulated invasion protein orga ... 96 4e-19 UniRef50_C4I6M4 Type III secretion apparatus protein OrgA/MxiK n... 90 2e-17 UniRef50_D2TZU4 Type III secretion system protein (Oxygen-regula... 89 6e-17 UniRef50_Q6R8E4 Orf5 n=2 Tax=Sodalis glossinidius RepID=Q6R8E4_S... 88 9e-17 UniRef50_C0AR78 Putative uncharacterized protein n=1 Tax=Proteus... 82 4e-15 Sequences not found previously or not previously below threshold: UniRef50_P0A227 Protein mxiK n=7 Tax=Shigella RepID=MXIK_SHIFL 47 2e-04 UniRef50_Q93RD2 EorA protein n=20 Tax=Escherichia coli RepID=Q93... 41 0.010 UniRef50_B1FB91 Type III secretion apparatus protein OrgA/MxiK n... 40 0.023 >UniRef50_Q46795 Putative uncharacterized protein ygeO (Fragment) n=8 Tax=Escherichia RepID=YGEO_ECOLI Length = 132 Score = 149 bits (376), Expect = 3e-35, Method: Composition-based stats. Identities = 132/132 (100%), Positives = 132/132 (100%) Query: 1 INNWNLLPLICLLSGCHFYRERFAERGFFYKVPDVLRDYLSAIPLEINEKARYKPGIANY 60 INNWNLLPLICLLSGCHFYRERFAERGFFYKVPDVLRDYLSAIPLEINEKARYKPGIANY Sbjct: 1 INNWNLLPLICLLSGCHFYRERFAERGFFYKVPDVLRDYLSAIPLEINEKARYKPGIANY 60 Query: 61 HNIITCGFSTLLPYIRQQPLAMQQRFNLLFPDFVDHIQSPLPLASTLLERITFYAKKNRD 120 HNIITCGFSTLLPYIRQQPLAMQQRFNLLFPDFVDHIQSPLPLASTLLERITFYAKKNRD Sbjct: 61 HNIITCGFSTLLPYIRQQPLAMQQRFNLLFPDFVDHIQSPLPLASTLLERITFYAKKNRD 120 Query: 121 ELDKISCKWCCD 132 ELDKISCKWCCD Sbjct: 121 ELDKISCKWCCD 132 >UniRef50_P58653 Oxygen-regulated invasion protein orgA n=34 Tax=Salmonella enterica RepID=ORGA_SALTY Length = 199 Score = 122 bits (307), Expect = 2e-27, Method: Composition-based stats. Identities = 30/127 (23%), Positives = 55/127 (43%), Gaps = 3/127 (2%) Query: 1 INNWNLLPLICLLSGCHFYRERFAERGFFYKVPDVLRDYLSAIPLEINEKARYKPGIANY 60 + W LP + L GCH R A +G +PD + +L+ + N+ Sbjct: 76 LRQWRRLPQVAYLLGCHKLRADLARQGALLGLPDWAQAFLA---MHQGTSLSVCNKAPNH 132 Query: 61 HNIITCGFSTLLPYIRQQPLAMQQRFNLLFPDFVDHIQSPLPLASTLLERITFYAKKNRD 120 +++ G++ L P ++ QRF LLFP F++ + ++L YA+K + Sbjct: 133 RFLLSVGYAQLNALNEFLPESLAQRFPLLFPPFIEEALKQDAVEMSILLLALQYAQKYPN 192 Query: 121 ELDKISC 127 + +C Sbjct: 193 TVPAFAC 199 >UniRef50_Q7NVC4 Probable oxygen-regulated invasion protein; cell invasion protein n=1 Tax=Chromobacterium violaceum RepID=Q7NVC4_CHRVO Length = 192 Score = 121 bits (303), Expect = 8e-27, Method: Composition-based stats. Identities = 37/125 (29%), Positives = 55/125 (44%), Gaps = 2/125 (1%) Query: 1 INNWNLLPLICLLSGCHFYRERFAERGFFYKVPDVLRDYLSAIPLEINEKARYKPGIANY 60 + W+ LP L GC R R A RG ++P R + +A+ + A + Sbjct: 66 LAEWHRLPQAAYLMGCQLLRARLAARGGLLRLPGWARGF-AAMQIGAEWPAAPLDEAPGH 124 Query: 61 HNIITCGFSTLLPYIRQQPLAMQQRFNLLFPDFVDHIQSPLPLASTLLE-RITFYAKKNR 119 I+ GF LL + + P A+ QR LLFP +VD +P +TLL YAK++ Sbjct: 125 DAILLAGFGQLLSWRERMPEALAQRLPLLFPAWVDEASPCIPAQNTLLLTLALQYAKRHP 184 Query: 120 DELDK 124 Sbjct: 185 HFPPS 189 >UniRef50_D2TZ25 Type III secretion apparatus protein OrgA,MxiK n=1 Tax=Arsenophonus nasoniae RepID=D2TZ25_9ENTR Length = 182 Score = 108 bits (270), Expect = 5e-23, Method: Composition-based stats. Identities = 20/120 (16%), Positives = 42/120 (35%), Gaps = 4/120 (3%) Query: 1 INNWNLLPLICLLSGCHFYRERFAERGFFYKVPDVLRDYLSAIPLEINEKARYKPGIANY 60 I NWN++ + + C YR G K+ + +R++ ++ Sbjct: 64 IKNWNVILEVSFMLACLRYRSLLFRSGKIVKLDESIRNFCELNIIDDFVFVAKNNFSDID 123 Query: 61 HNIITCGFSTLLPYIRQQPLAMQQRFNLLFPDFVDHIQSP--LPLASTLLERITFYAKKN 118 ++ + Y + +R +LFP + + + LL+ YAK+ Sbjct: 124 LWLLA--RKEIYIYQDYLSDTVMKRLAILFPRIDNDDYNFAKINPQFNLLKLAVQYAKRY 181 >UniRef50_Q6R8A2 OrgA n=2 Tax=Sodalis glossinidius RepID=Q6R8A2_SODGL Length = 199 Score = 105 bits (263), Expect = 3e-22, Method: Composition-based stats. Identities = 34/128 (26%), Positives = 57/128 (44%), Gaps = 6/128 (4%) Query: 1 INNWNLLPLICLLSGCHFYRERFAERGFFYKVPDVLRDYLSAIPLEINEKARYKPGIANY 60 + W+LLP I LL C +R A+ G+ +PD LR + + + + ++ I Sbjct: 64 VEAWHLLPQIALLMACQRHRASLAKGGYGASLPDWLRQFAALSLV--SSRSSPGETIPPP 121 Query: 61 HNIITCGFSTLLPYIRQQPLAMQQRFNLLFPD---FVDHIQSPLPLAST-LLERITFYAK 116 ++ G LL + P ++QR +LLFP D + LP LL+ +AK Sbjct: 122 AQLLAWGKYELLAFAGSLPRGLRQRLDLLFPPEEGRDDLSRLSLPPPCRLLLKLAFQHAK 181 Query: 117 KNRDELDK 124 ++ D Sbjct: 182 RHPATPDT 189 >UniRef50_B2VID4 Oxygen-regulated invasion protein n=1 Tax=Erwinia tasmaniensis RepID=B2VID4_ERWT9 Length = 178 Score = 105 bits (262), Expect = 5e-22, Method: Composition-based stats. Identities = 26/123 (21%), Positives = 45/123 (36%), Gaps = 7/123 (5%) Query: 1 INNWNLLPLICLLSGCHFYRERFAERGFFYKVPDVLRDYLSAIPLEINEKARYKPGIANY 60 ++ W L+ L G + R R ++ + L ++S + Sbjct: 60 LDKWELINDAACLIGGYLLRSRILKQCTEIILNPRLSSFISLPIPHHVSLTTTGE----H 115 Query: 61 HNIITCGFSTLLPYIRQQPLAMQQRFNLLFPD---FVDHIQSPLPLASTLLERITFYAKK 117 N ++ G + +L I PLA+++R L P D + P LL YAK Sbjct: 116 SNTLSLGLAFILSQIPHFPLALKERVLLFLPAEIDLPDTFIARNPNHLNLLTMALNYAKN 175 Query: 118 NRD 120 R+ Sbjct: 176 YRE 178 >UniRef50_C7E4S2 Oxygen-regulated invasion protein n=1 Tax=Pantoea stewartii subsp. stewartii DC283 RepID=C7E4S2_ERWST Length = 185 Score = 102 bits (253), Expect = 5e-21, Method: Composition-based stats. Identities = 28/121 (23%), Positives = 43/121 (35%), Gaps = 6/121 (4%) Query: 1 INNWNLLPLICLLSGCHFYRERFAERGFFYKVPDVLRDYLSAIPLEINEKARYKPGIANY 60 ++ W+L+P L G + R +R L ++S + PG N Sbjct: 67 LSCWHLIPETAHLIGGYLMRSHLLKRAALLMSDPRLLAFISLPMPH---RIALDPGDQNS 123 Query: 61 HNIITCGFSTLLPYIRQQPLAMQQRFNLLFPDFVDHIQSP---LPLASTLLERITFYAKK 117 +CG + +L P A++QR L FP + P LL YAK Sbjct: 124 MATTSCGLAFILSQFPGLPQALRQRLLLSFPAGMSIEPLPAGKTLNHINLLRMALTYAKH 183 Query: 118 N 118 Sbjct: 184 Y 184 >UniRef50_C4K5N1 Oxygen-regulated invasion protein n=1 Tax=Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum) RepID=C4K5N1_HAMD5 Length = 192 Score = 101 bits (252), Expect = 6e-21, Method: Composition-based stats. Identities = 24/125 (19%), Positives = 52/125 (41%), Gaps = 5/125 (4%) Query: 1 INNWNLLPLICLLSGCHFYRERFAERGFFYKVPDVLRDYLSAIPLEINEKARYKPGIANY 60 + +W LP I + C +R ++G ++P ++ + + + + ++ + N+ Sbjct: 65 LTHWFYLPQIAFIMACQRHRTILLKKGMLLRLPLWVQQF-AKLEMVEALPYQFNQKM-NF 122 Query: 61 HNIITCGFSTLLPYIRQQPLAMQQRFNLLFPDFVDHIQSPLPLASTLLE---RITFYAKK 117 ++ G L + ++ P A+ QR LFP ++ + S L + KK Sbjct: 123 LQLLAYGAKELSLWEKELPGAISQRMPFLFPFSMNAVLDFDRKISPNLLFINLAIQHVKK 182 Query: 118 NRDEL 122 N L Sbjct: 183 NPQSL 187 >UniRef50_D0FT12 Oxygen-regulated invasion protein n=2 Tax=Erwinia pyrifoliae RepID=D0FT12_ERWPY Length = 184 Score = 99.8 bits (247), Expect = 3e-20, Method: Composition-based stats. Identities = 23/122 (18%), Positives = 40/122 (32%), Gaps = 7/122 (5%) Query: 1 INNWNLLPLICLLSGCHFYRERFAERGFFYKVPDVLRDYLSAIPLEINEKARYKPGIANY 60 + W +P+ L G + R R + L ++S + + Sbjct: 67 LTQWEHMPVTAHLVGGYLLRARLLSQCAVLMSDSRLLAFISLPLI----PHISSLTLPRS 122 Query: 61 HNIITCGFSTLLPYIRQQPLAMQQRFNLLFP---DFVDHIQSPLPLASTLLERITFYAKK 117 + I G + +L IR PLA+ +R + FP LL+ YA Sbjct: 123 VDTIALGVAFILSQIRPLPLALMRRLLMSFPTDIKLPQLHIERTLGHHNLLKMAINYAIH 182 Query: 118 NR 119 + Sbjct: 183 FK 184 >UniRef50_C2LLV9 Type III secretion system protein (Oxygen-regulated invasion protein) n=2 Tax=Proteus mirabilis RepID=C2LLV9_PROMI Length = 190 Score = 98.3 bits (243), Expect = 7e-20, Method: Composition-based stats. Identities = 27/118 (22%), Positives = 44/118 (37%), Gaps = 5/118 (4%) Query: 2 NNWNLLPLICLLSGCHFYRERFAERGFFYKVPDVLRDYLSAIPLEINEKARYKPGIANYH 61 +W+ LP L G + R + +++ P L+ +L+ P+ Sbjct: 70 THWHTLPRCALFLGYFYSRHTLLAQNYYHLEPA-LKAFLALYPMLNRTVDSKILLSLKDI 128 Query: 62 NIITCGFSTLLPYIRQQPLAMQQRFNLLFPD----FVDHIQSPLPLASTLLERITFYA 115 I G+ L +I+ A+ QRF LLF L L+ TL + YA Sbjct: 129 APIDIGYQLLFNFIKLISNALAQRFKLLFSPKSLSINIEFPKSLVLSPTLFLLVLNYA 186 >UniRef50_D2UDE2 Probable oxygen-regulated invasion protein orga n=1 Tax=Xanthomonas albilineans RepID=D2UDE2_XANAL Length = 198 Score = 95.9 bits (237), Expect = 4e-19, Method: Composition-based stats. Identities = 22/131 (16%), Positives = 43/131 (32%), Gaps = 17/131 (12%) Query: 1 INNWNLLPLICLLSGCHFYRERFAERGFFYKVPDVLRDYLSAIPLEINEKARYKPGIANY 60 + W ++P +C L G R + + ++ + ++ + A + Sbjct: 66 LRKWYVIPDLCFLLGLFSQRGEWLSSNRYRQLDGRCKRFIELPLPHLAVPACVLDENVDP 125 Query: 61 HNIITCGFSTLLPYIRQQPLAMQQRFNLLFPDFVDHIQSPLPLA--------------ST 106 + CG + L I P + +R LLF ++ + L L T Sbjct: 126 ---VVCGLAALRFLIPAMPPVIDERLRLLFSSRIEAETAALSLQVGRASPEDCGRWISIT 182 Query: 107 LLERITFYAKK 117 L YA+ Sbjct: 183 LFSMAAHYAQN 193 >UniRef50_C4I6M4 Type III secretion apparatus protein OrgA/MxiK n=29 Tax=pseudomallei group RepID=C4I6M4_BURPS Length = 200 Score = 90.2 bits (222), Expect = 2e-17, Method: Composition-based stats. Identities = 27/125 (21%), Positives = 46/125 (36%), Gaps = 12/125 (9%) Query: 1 INNWNLLPLICLLSGCHFYRERFAERGFFYKVPDVLRDYLSAIPLEINEKARYKPGIANY 60 +++W LP I L G R ERG + ++ + +L G+ + Sbjct: 70 VDHWARLPRIAYLIGVQRLRAALVERGQYVRLDASSQRFLCMPL--AAVPKAACAGMPDD 127 Query: 61 HNIITCGFSTLLPYIRQQPLAMQQRFNLLFPDFV----------DHIQSPLPLASTLLER 110 I+ G + L + P A++QR LLFP H + +S+L Sbjct: 128 DAIVAAGTACLTAALHDAPRALRQRLPLLFPRAHAARLASGLDGAHDDARAAWSSSLFSF 187 Query: 111 ITFYA 115 +A Sbjct: 188 AVNHA 192 >UniRef50_D2TZU4 Type III secretion system protein (Oxygen-regulated invasion protein) n=1 Tax=Arsenophonus nasoniae RepID=D2TZU4_9ENTR Length = 185 Score = 88.6 bits (218), Expect = 6e-17, Method: Composition-based stats. Identities = 32/121 (26%), Positives = 52/121 (42%), Gaps = 6/121 (4%) Query: 1 INNWNLLPLICLLSGCHFYRERFAERGFFYKVPDVLRDYLS-AIPLEINEKARYKPGIAN 59 IN W+ LP+ L G + + ++P+ +LS A L +K + P IA Sbjct: 61 INYWSRLPIAALYLGGLYQSPQLMIANQLTQLPEQFSQFLSWARLLLPPQKKQIVPLIAT 120 Query: 60 Y---HNIITCGFSTLLPYIRQQPLAMQQRFNLLFPDFVD--HIQSPLPLASTLLERITFY 114 + CG ++P I + LA+ RF+LLF + LP+ +LL+ Y Sbjct: 121 SYSQDELTKCGMWAIIPLIEKCSLALTARFSLLFNKNYPQCQANTVLPVNYSLLKATLNY 180 Query: 115 A 115 Sbjct: 181 V 181 >UniRef50_Q6R8E4 Orf5 n=2 Tax=Sodalis glossinidius RepID=Q6R8E4_SODGL Length = 195 Score = 87.9 bits (216), Expect = 9e-17, Method: Composition-based stats. Identities = 28/130 (21%), Positives = 46/130 (35%), Gaps = 15/130 (11%) Query: 1 INNWNLLPLICLLSGCHFYRERFAERGFFYKVPDVLRDYLSAIPL---------EINEKA 51 ++NW L LL G H R R G F + ++ +L+ E E A Sbjct: 67 LDNWQRLGDAALLIGAHLLRNRLLSEGRFILLSAPVQSFLALPLPPLTPGALPQEQEEPA 126 Query: 52 RYKPGIANYHNIITCGFSTLLPYIRQQPLAMQQRFNLLFP---DFVDHIQSPLPLASTLL 108 + G LL +++ A+ +R LLFP S P + L+ Sbjct: 127 TTLLQDPDPA---AWGAYCLLSMLKRLSPAVYRRACLLFPVEQPLPQQATSLSPSSINLI 183 Query: 109 ERITFYAKKN 118 + +A+ Sbjct: 184 KMALHHAQYF 193 >UniRef50_C0AR78 Putative uncharacterized protein n=1 Tax=Proteus penneri ATCC 35198 RepID=C0AR78_9ENTR Length = 188 Score = 82.5 bits (202), Expect = 4e-15, Method: Composition-based stats. Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 2/90 (2%) Query: 2 NNWNLLPLICLLSGCHFYRERFAERGFFYKVPDVLRDYLSAIPLEINEKARYKPGIANYH 61 W+LLP L G + + G +Y++P L+ +LS P+ + + Sbjct: 71 TQWSLLPQCALFLGYFYSPQYILHSGDYYQLPSSLQAFLSLRPVILINEENKNDNNE--I 128 Query: 62 NIITCGFSTLLPYIRQQPLAMQQRFNLLFP 91 IT G+ L +I +A+ QRF L FP Sbjct: 129 APITIGYQLLFTFIHSISVALAQRFKLCFP 158 >UniRef50_P0A227 Protein mxiK n=7 Tax=Shigella RepID=MXIK_SHIFL Length = 175 Score = 46.6 bits (109), Expect = 2e-04, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 39/120 (32%), Gaps = 23/120 (19%) Query: 1 INNWNLLPLICLLSGCHFYRERFAERGFFYKVPDVLRDYLSAIPLEINEKARYKPGIANY 60 + NWNLLP + G R +++ Y + E Sbjct: 68 VANWNLLPAVAYFIGSQESR--------LINHSEMVISYYGGKISKQGE----------- 108 Query: 61 HNIITCGFSTLLPYIRQQPLAMQQRFNLLFPDFVDHIQSPLPLASTLLER--ITFYAKKN 118 I GF L+ + + + +R NLLF + P+ L YAK++ Sbjct: 109 -AAIRSGFWHLIAWKENISVGIYERINLLFNPIALEG-NYTPVERNLSRLNEGMQYAKRH 166 >UniRef50_Q93RD2 EorA protein n=20 Tax=Escherichia coli RepID=Q93RD2_ECOLX Length = 96 Score = 41.2 bits (95), Expect = 0.010, Method: Composition-based stats. Identities = 25/32 (78%), Positives = 26/32 (81%) Query: 1 INNWNLLPLICLLSGCHFYRERFAERGFFYKV 32 INNWNL PL CL SG HFYRERFAERGFF + Sbjct: 62 INNWNLFPLFCLFSGYHFYRERFAERGFFIRF 93 >UniRef50_B1FB91 Type III secretion apparatus protein OrgA/MxiK n=1 Tax=Burkholderia ambifaria IOP40-10 RepID=B1FB91_9BURK Length = 192 Score = 40.1 bits (92), Expect = 0.023, Method: Composition-based stats. Identities = 23/89 (25%), Positives = 34/89 (38%), Gaps = 2/89 (2%) Query: 4 WNLLPLICLLSGCHFYRERFAERGFFYKVPDVLRDYLSAIPLEINEKARYKPGIANYHNI 63 W L IC L G R E+ ++ K+ + R +L A P +I Sbjct: 67 WAHLRRICYLIGVLRLRSPIIEQAWYPKLDALARQFLQVPAP--ALPAAESPLRLEQADI 124 Query: 64 ITCGFSTLLPYIRQQPLAMQQRFNLLFPD 92 G + R+ P A++ R LLFP Sbjct: 125 YAAGSAGFAAVFRRMPAALRLRLPLLFPA 153 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q46795 Putative uncharacterized protein ygeO (Fragment)... 141 6e-33 UniRef50_P58653 Oxygen-regulated invasion protein orgA n=34 Tax=... 122 3e-27 UniRef50_Q7NVC4 Probable oxygen-regulated invasion protein; cell... 119 3e-26 UniRef50_D2TZ25 Type III secretion apparatus protein OrgA,MxiK n... 108 7e-23 UniRef50_Q6R8A2 OrgA n=2 Tax=Sodalis glossinidius RepID=Q6R8A2_S... 105 5e-22 UniRef50_B2VID4 Oxygen-regulated invasion protein n=1 Tax=Erwini... 103 2e-21 UniRef50_C7E4S2 Oxygen-regulated invasion protein n=1 Tax=Pantoe... 102 4e-21 UniRef50_C4I6M4 Type III secretion apparatus protein OrgA/MxiK n... 100 2e-20 UniRef50_C4K5N1 Oxygen-regulated invasion protein n=1 Tax=Candid... 99 4e-20 UniRef50_D0FT12 Oxygen-regulated invasion protein n=2 Tax=Erwini... 98 8e-20 UniRef50_C2LLV9 Type III secretion system protein (Oxygen-regula... 95 7e-19 UniRef50_D2UDE2 Probable oxygen-regulated invasion protein orga ... 94 2e-18 UniRef50_Q6R8E4 Orf5 n=2 Tax=Sodalis glossinidius RepID=Q6R8E4_S... 87 1e-16 UniRef50_D2TZU4 Type III secretion system protein (Oxygen-regula... 86 4e-16 UniRef50_P0A227 Protein mxiK n=7 Tax=Shigella RepID=MXIK_SHIFL 86 5e-16 UniRef50_C0AR78 Putative uncharacterized protein n=1 Tax=Proteus... 81 1e-14 Sequences not found previously or not previously below threshold: UniRef50_B1FB91 Type III secretion apparatus protein OrgA/MxiK n... 40 0.028 CONVERGED! >UniRef50_Q46795 Putative uncharacterized protein ygeO (Fragment) n=8 Tax=Escherichia RepID=YGEO_ECOLI Length = 132 Score = 141 bits (356), Expect = 6e-33, Method: Composition-based stats. Identities = 132/132 (100%), Positives = 132/132 (100%) Query: 1 INNWNLLPLICLLSGCHFYRERFAERGFFYKVPDVLRDYLSAIPLEINEKARYKPGIANY 60 INNWNLLPLICLLSGCHFYRERFAERGFFYKVPDVLRDYLSAIPLEINEKARYKPGIANY Sbjct: 1 INNWNLLPLICLLSGCHFYRERFAERGFFYKVPDVLRDYLSAIPLEINEKARYKPGIANY 60 Query: 61 HNIITCGFSTLLPYIRQQPLAMQQRFNLLFPDFVDHIQSPLPLASTLLERITFYAKKNRD 120 HNIITCGFSTLLPYIRQQPLAMQQRFNLLFPDFVDHIQSPLPLASTLLERITFYAKKNRD Sbjct: 61 HNIITCGFSTLLPYIRQQPLAMQQRFNLLFPDFVDHIQSPLPLASTLLERITFYAKKNRD 120 Query: 121 ELDKISCKWCCD 132 ELDKISCKWCCD Sbjct: 121 ELDKISCKWCCD 132 >UniRef50_P58653 Oxygen-regulated invasion protein orgA n=34 Tax=Salmonella enterica RepID=ORGA_SALTY Length = 199 Score = 122 bits (307), Expect = 3e-27, Method: Composition-based stats. Identities = 30/127 (23%), Positives = 55/127 (43%), Gaps = 3/127 (2%) Query: 1 INNWNLLPLICLLSGCHFYRERFAERGFFYKVPDVLRDYLSAIPLEINEKARYKPGIANY 60 + W LP + L GCH R A +G +PD + +L+ + N+ Sbjct: 76 LRQWRRLPQVAYLLGCHKLRADLARQGALLGLPDWAQAFLA---MHQGTSLSVCNKAPNH 132 Query: 61 HNIITCGFSTLLPYIRQQPLAMQQRFNLLFPDFVDHIQSPLPLASTLLERITFYAKKNRD 120 +++ G++ L P ++ QRF LLFP F++ + ++L YA+K + Sbjct: 133 RFLLSVGYAQLNALNEFLPESLAQRFPLLFPPFIEEALKQDAVEMSILLLALQYAQKYPN 192 Query: 121 ELDKISC 127 + +C Sbjct: 193 TVPAFAC 199 >UniRef50_Q7NVC4 Probable oxygen-regulated invasion protein; cell invasion protein n=1 Tax=Chromobacterium violaceum RepID=Q7NVC4_CHRVO Length = 192 Score = 119 bits (297), Expect = 3e-26, Method: Composition-based stats. Identities = 37/125 (29%), Positives = 55/125 (44%), Gaps = 2/125 (1%) Query: 1 INNWNLLPLICLLSGCHFYRERFAERGFFYKVPDVLRDYLSAIPLEINEKARYKPGIANY 60 + W+ LP L GC R R A RG ++P R + +A+ + A + Sbjct: 66 LAEWHRLPQAAYLMGCQLLRARLAARGGLLRLPGWARGF-AAMQIGAEWPAAPLDEAPGH 124 Query: 61 HNIITCGFSTLLPYIRQQPLAMQQRFNLLFPDFVDHIQSPLPLASTLLE-RITFYAKKNR 119 I+ GF LL + + P A+ QR LLFP +VD +P +TLL YAK++ Sbjct: 125 DAILLAGFGQLLSWRERMPEALAQRLPLLFPAWVDEASPCIPAQNTLLLTLALQYAKRHP 184 Query: 120 DELDK 124 Sbjct: 185 HFPPS 189 >UniRef50_D2TZ25 Type III secretion apparatus protein OrgA,MxiK n=1 Tax=Arsenophonus nasoniae RepID=D2TZ25_9ENTR Length = 182 Score = 108 bits (269), Expect = 7e-23, Method: Composition-based stats. Identities = 20/120 (16%), Positives = 42/120 (35%), Gaps = 4/120 (3%) Query: 1 INNWNLLPLICLLSGCHFYRERFAERGFFYKVPDVLRDYLSAIPLEINEKARYKPGIANY 60 I NWN++ + + C YR G K+ + +R++ ++ Sbjct: 64 IKNWNVILEVSFMLACLRYRSLLFRSGKIVKLDESIRNFCELNIIDDFVFVAKNNFSDID 123 Query: 61 HNIITCGFSTLLPYIRQQPLAMQQRFNLLFPDFVDHIQSP--LPLASTLLERITFYAKKN 118 ++ + Y + +R +LFP + + + LL+ YAK+ Sbjct: 124 LWLLA--RKEIYIYQDYLSDTVMKRLAILFPRIDNDDYNFAKINPQFNLLKLAVQYAKRY 181 >UniRef50_Q6R8A2 OrgA n=2 Tax=Sodalis glossinidius RepID=Q6R8A2_SODGL Length = 199 Score = 105 bits (262), Expect = 5e-22, Method: Composition-based stats. Identities = 34/128 (26%), Positives = 57/128 (44%), Gaps = 6/128 (4%) Query: 1 INNWNLLPLICLLSGCHFYRERFAERGFFYKVPDVLRDYLSAIPLEINEKARYKPGIANY 60 + W+LLP I LL C +R A+ G+ +PD LR + + + + ++ I Sbjct: 64 VEAWHLLPQIALLMACQRHRASLAKGGYGASLPDWLRQFAALSLV--SSRSSPGETIPPP 121 Query: 61 HNIITCGFSTLLPYIRQQPLAMQQRFNLLFPD---FVDHIQSPLPLAST-LLERITFYAK 116 ++ G LL + P ++QR +LLFP D + LP LL+ +AK Sbjct: 122 AQLLAWGKYELLAFAGSLPRGLRQRLDLLFPPEEGRDDLSRLSLPPPCRLLLKLAFQHAK 181 Query: 117 KNRDELDK 124 ++ D Sbjct: 182 RHPATPDT 189 >UniRef50_B2VID4 Oxygen-regulated invasion protein n=1 Tax=Erwinia tasmaniensis RepID=B2VID4_ERWT9 Length = 178 Score = 103 bits (256), Expect = 2e-21, Method: Composition-based stats. Identities = 26/123 (21%), Positives = 45/123 (36%), Gaps = 7/123 (5%) Query: 1 INNWNLLPLICLLSGCHFYRERFAERGFFYKVPDVLRDYLSAIPLEINEKARYKPGIANY 60 ++ W L+ L G + R R ++ + L ++S + Sbjct: 60 LDKWELINDAACLIGGYLLRSRILKQCTEIILNPRLSSFISLPIPHHVSLTTTGE----H 115 Query: 61 HNIITCGFSTLLPYIRQQPLAMQQRFNLLFPD---FVDHIQSPLPLASTLLERITFYAKK 117 N ++ G + +L I PLA+++R L P D + P LL YAK Sbjct: 116 SNTLSLGLAFILSQIPHFPLALKERVLLFLPAEIDLPDTFIARNPNHLNLLTMALNYAKN 175 Query: 118 NRD 120 R+ Sbjct: 176 YRE 178 >UniRef50_C7E4S2 Oxygen-regulated invasion protein n=1 Tax=Pantoea stewartii subsp. stewartii DC283 RepID=C7E4S2_ERWST Length = 185 Score = 102 bits (253), Expect = 4e-21, Method: Composition-based stats. Identities = 28/121 (23%), Positives = 43/121 (35%), Gaps = 6/121 (4%) Query: 1 INNWNLLPLICLLSGCHFYRERFAERGFFYKVPDVLRDYLSAIPLEINEKARYKPGIANY 60 ++ W+L+P L G + R +R L ++S + PG N Sbjct: 67 LSCWHLIPETAHLIGGYLMRSHLLKRAALLMSDPRLLAFISLPMPH---RIALDPGDQNS 123 Query: 61 HNIITCGFSTLLPYIRQQPLAMQQRFNLLFPDFVDHIQSP---LPLASTLLERITFYAKK 117 +CG + +L P A++QR L FP + P LL YAK Sbjct: 124 MATTSCGLAFILSQFPGLPQALRQRLLLSFPAGMSIEPLPAGKTLNHINLLRMALTYAKH 183 Query: 118 N 118 Sbjct: 184 Y 184 >UniRef50_C4I6M4 Type III secretion apparatus protein OrgA/MxiK n=29 Tax=pseudomallei group RepID=C4I6M4_BURPS Length = 200 Score = 99.8 bits (247), Expect = 2e-20, Method: Composition-based stats. Identities = 27/125 (21%), Positives = 46/125 (36%), Gaps = 12/125 (9%) Query: 1 INNWNLLPLICLLSGCHFYRERFAERGFFYKVPDVLRDYLSAIPLEINEKARYKPGIANY 60 +++W LP I L G R ERG + ++ + +L G+ + Sbjct: 70 VDHWARLPRIAYLIGVQRLRAALVERGQYVRLDASSQRFLCMPL--AAVPKAACAGMPDD 127 Query: 61 HNIITCGFSTLLPYIRQQPLAMQQRFNLLFPDFV----------DHIQSPLPLASTLLER 110 I+ G + L + P A++QR LLFP H + +S+L Sbjct: 128 DAIVAAGTACLTAALHDAPRALRQRLPLLFPRAHAARLASGLDGAHDDARAAWSSSLFSF 187 Query: 111 ITFYA 115 +A Sbjct: 188 AVNHA 192 >UniRef50_C4K5N1 Oxygen-regulated invasion protein n=1 Tax=Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum) RepID=C4K5N1_HAMD5 Length = 192 Score = 99.0 bits (245), Expect = 4e-20, Method: Composition-based stats. Identities = 24/125 (19%), Positives = 52/125 (41%), Gaps = 5/125 (4%) Query: 1 INNWNLLPLICLLSGCHFYRERFAERGFFYKVPDVLRDYLSAIPLEINEKARYKPGIANY 60 + +W LP I + C +R ++G ++P ++ + + + + ++ + N+ Sbjct: 65 LTHWFYLPQIAFIMACQRHRTILLKKGMLLRLPLWVQQF-AKLEMVEALPYQFNQKM-NF 122 Query: 61 HNIITCGFSTLLPYIRQQPLAMQQRFNLLFPDFVDHIQSPLPLASTLLE---RITFYAKK 117 ++ G L + ++ P A+ QR LFP ++ + S L + KK Sbjct: 123 LQLLAYGAKELSLWEKELPGAISQRMPFLFPFSMNAVLDFDRKISPNLLFINLAIQHVKK 182 Query: 118 NRDEL 122 N L Sbjct: 183 NPQSL 187 >UniRef50_D0FT12 Oxygen-regulated invasion protein n=2 Tax=Erwinia pyrifoliae RepID=D0FT12_ERWPY Length = 184 Score = 98.3 bits (243), Expect = 8e-20, Method: Composition-based stats. Identities = 23/122 (18%), Positives = 40/122 (32%), Gaps = 7/122 (5%) Query: 1 INNWNLLPLICLLSGCHFYRERFAERGFFYKVPDVLRDYLSAIPLEINEKARYKPGIANY 60 + W +P+ L G + R R + L ++S + + Sbjct: 67 LTQWEHMPVTAHLVGGYLLRARLLSQCAVLMSDSRLLAFISLPLI----PHISSLTLPRS 122 Query: 61 HNIITCGFSTLLPYIRQQPLAMQQRFNLLFP---DFVDHIQSPLPLASTLLERITFYAKK 117 + I G + +L IR PLA+ +R + FP LL+ YA Sbjct: 123 VDTIALGVAFILSQIRPLPLALMRRLLMSFPTDIKLPQLHIERTLGHHNLLKMAINYAIH 182 Query: 118 NR 119 + Sbjct: 183 FK 184 >UniRef50_C2LLV9 Type III secretion system protein (Oxygen-regulated invasion protein) n=2 Tax=Proteus mirabilis RepID=C2LLV9_PROMI Length = 190 Score = 95.2 bits (235), Expect = 7e-19, Method: Composition-based stats. Identities = 27/118 (22%), Positives = 44/118 (37%), Gaps = 5/118 (4%) Query: 2 NNWNLLPLICLLSGCHFYRERFAERGFFYKVPDVLRDYLSAIPLEINEKARYKPGIANYH 61 +W+ LP L G + R + +++ P L+ +L+ P+ Sbjct: 70 THWHTLPRCALFLGYFYSRHTLLAQNYYHLEPA-LKAFLALYPMLNRTVDSKILLSLKDI 128 Query: 62 NIITCGFSTLLPYIRQQPLAMQQRFNLLFPD----FVDHIQSPLPLASTLLERITFYA 115 I G+ L +I+ A+ QRF LLF L L+ TL + YA Sbjct: 129 APIDIGYQLLFNFIKLISNALAQRFKLLFSPKSLSINIEFPKSLVLSPTLFLLVLNYA 186 >UniRef50_D2UDE2 Probable oxygen-regulated invasion protein orga n=1 Tax=Xanthomonas albilineans RepID=D2UDE2_XANAL Length = 198 Score = 93.6 bits (231), Expect = 2e-18, Method: Composition-based stats. Identities = 22/131 (16%), Positives = 43/131 (32%), Gaps = 17/131 (12%) Query: 1 INNWNLLPLICLLSGCHFYRERFAERGFFYKVPDVLRDYLSAIPLEINEKARYKPGIANY 60 + W ++P +C L G R + + ++ + ++ + A + Sbjct: 66 LRKWYVIPDLCFLLGLFSQRGEWLSSNRYRQLDGRCKRFIELPLPHLAVPACVLDENVDP 125 Query: 61 HNIITCGFSTLLPYIRQQPLAMQQRFNLLFPDFVDHIQSPLPLA--------------ST 106 + CG + L I P + +R LLF ++ + L L T Sbjct: 126 ---VVCGLAALRFLIPAMPPVIDERLRLLFSSRIEAETAALSLQVGRASPEDCGRWISIT 182 Query: 107 LLERITFYAKK 117 L YA+ Sbjct: 183 LFSMAAHYAQN 193 >UniRef50_Q6R8E4 Orf5 n=2 Tax=Sodalis glossinidius RepID=Q6R8E4_SODGL Length = 195 Score = 87.5 bits (215), Expect = 1e-16, Method: Composition-based stats. Identities = 28/130 (21%), Positives = 46/130 (35%), Gaps = 15/130 (11%) Query: 1 INNWNLLPLICLLSGCHFYRERFAERGFFYKVPDVLRDYLSAIPL---------EINEKA 51 ++NW L LL G H R R G F + ++ +L+ E E A Sbjct: 67 LDNWQRLGDAALLIGAHLLRNRLLSEGRFILLSAPVQSFLALPLPPLTPGALPQEQEEPA 126 Query: 52 RYKPGIANYHNIITCGFSTLLPYIRQQPLAMQQRFNLLFP---DFVDHIQSPLPLASTLL 108 + G LL +++ A+ +R LLFP S P + L+ Sbjct: 127 TTLLQDPDPA---AWGAYCLLSMLKRLSPAVYRRACLLFPVEQPLPQQATSLSPSSINLI 183 Query: 109 ERITFYAKKN 118 + +A+ Sbjct: 184 KMALHHAQYF 193 >UniRef50_D2TZU4 Type III secretion system protein (Oxygen-regulated invasion protein) n=1 Tax=Arsenophonus nasoniae RepID=D2TZU4_9ENTR Length = 185 Score = 85.9 bits (211), Expect = 4e-16, Method: Composition-based stats. Identities = 32/121 (26%), Positives = 52/121 (42%), Gaps = 6/121 (4%) Query: 1 INNWNLLPLICLLSGCHFYRERFAERGFFYKVPDVLRDYLS-AIPLEINEKARYKPGIAN 59 IN W+ LP+ L G + + ++P+ +LS A L +K + P IA Sbjct: 61 INYWSRLPIAALYLGGLYQSPQLMIANQLTQLPEQFSQFLSWARLLLPPQKKQIVPLIAT 120 Query: 60 Y---HNIITCGFSTLLPYIRQQPLAMQQRFNLLFPDFVD--HIQSPLPLASTLLERITFY 114 + CG ++P I + LA+ RF+LLF + LP+ +LL+ Y Sbjct: 121 SYSQDELTKCGMWAIIPLIEKCSLALTARFSLLFNKNYPQCQANTVLPVNYSLLKATLNY 180 Query: 115 A 115 Sbjct: 181 V 181 >UniRef50_P0A227 Protein mxiK n=7 Tax=Shigella RepID=MXIK_SHIFL Length = 175 Score = 85.5 bits (210), Expect = 5e-16, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 39/120 (32%), Gaps = 23/120 (19%) Query: 1 INNWNLLPLICLLSGCHFYRERFAERGFFYKVPDVLRDYLSAIPLEINEKARYKPGIANY 60 + NWNLLP + G R +++ Y + E Sbjct: 68 VANWNLLPAVAYFIGSQESR--------LINHSEMVISYYGGKISKQGE----------- 108 Query: 61 HNIITCGFSTLLPYIRQQPLAMQQRFNLLFPDFVDHIQSPLPLASTLLER--ITFYAKKN 118 I GF L+ + + + +R NLLF + P+ L YAK++ Sbjct: 109 -AAIRSGFWHLIAWKENISVGIYERINLLFNPIALEG-NYTPVERNLSRLNEGMQYAKRH 166 >UniRef50_C0AR78 Putative uncharacterized protein n=1 Tax=Proteus penneri ATCC 35198 RepID=C0AR78_9ENTR Length = 188 Score = 80.9 bits (198), Expect = 1e-14, Method: Composition-based stats. Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 2/90 (2%) Query: 2 NNWNLLPLICLLSGCHFYRERFAERGFFYKVPDVLRDYLSAIPLEINEKARYKPGIANYH 61 W+LLP L G + + G +Y++P L+ +LS P+ + + Sbjct: 71 TQWSLLPQCALFLGYFYSPQYILHSGDYYQLPSSLQAFLSLRPVILINEENKNDNN--EI 128 Query: 62 NIITCGFSTLLPYIRQQPLAMQQRFNLLFP 91 IT G+ L +I +A+ QRF L FP Sbjct: 129 APITIGYQLLFTFIHSISVALAQRFKLCFP 158 >UniRef50_B1FB91 Type III secretion apparatus protein OrgA/MxiK n=1 Tax=Burkholderia ambifaria IOP40-10 RepID=B1FB91_9BURK Length = 192 Score = 39.7 bits (91), Expect = 0.028, Method: Composition-based stats. Identities = 23/93 (24%), Positives = 34/93 (36%), Gaps = 2/93 (2%) Query: 4 WNLLPLICLLSGCHFYRERFAERGFFYKVPDVLRDYLSAIPLEINEKARYKPGIANYHNI 63 W L IC L G R E+ ++ K+ + R +L A P +I Sbjct: 67 WAHLRRICYLIGVLRLRSPIIEQAWYPKLDALARQFLQVPAP--ALPAAESPLRLEQADI 124 Query: 64 ITCGFSTLLPYIRQQPLAMQQRFNLLFPDFVDH 96 G + R+ P A++ R LLFP Sbjct: 125 YAAGSAGFAAVFRRMPAALRLRLPLLFPAHAAE 157 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.316 0.130 0.362 Lambda K H 0.267 0.0399 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 634,256,197 Number of Sequences: 3077464 Number of extensions: 16560513 Number of successful extensions: 95187 Number of sequences better than 1.0e-01: 20 Number of HSP's better than 0.1 without gapping: 49 Number of HSP's successfully gapped in prelim test: 9 Number of HSP's that attempted gapping in prelim test: 95056 Number of HSP's gapped (non-prelim): 65 length of query: 132 length of database: 1,040,396,356 effective HSP length: 97 effective length of query: 35 effective length of database: 741,882,348 effective search space: 25965882180 effective search space used: 25965882180 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.2 bits) S2: 87 (38.2 bits)