125 c3s25A_ Probab=96.53   E-value=0.03  Score=28.09  Aligned_columns=261  Identities=12%

Q ss_pred             EEECCCCEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCEEEEEEECCEEEEEECCCCEEEECCCCCCEEECCCCEEEEE
Q ss_conf             99789984999985678199887503666442123675302289808938998178707881333231110234201332
Q batch____        73 YAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEAL  152 (392)
Q Consensus        73 ~~~~~~g~v~a~d~~tG~~lW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (392)
                      ++...++.++..+...+..||+........           ....++...+.......++....................
T Consensus        19 ~~~~~~~~iY~~~~~~~~~ly~~~~dg~~~-----------~~l~~~~~~~~~~~~~~iy~~~~~~~~~~~~~~~i~~i~   87 (295)
T c3s25A_          19 LFCESDGEVFFSNTNDNGRLYAXNIDGSNI-----------HKLSNDTAXYINADKNYVYYVRNNNTFFSYDRNSLCRIK   87 (295)
T ss_dssp             CEEEETTEEEEEEGGGTTEEEEEETTSCSC-----------EEEEEEEEEEEEECSSEEEEEEECCCCSSCCSEEEEEEE
T ss_pred             EEEEECCEEEEEECCCCCCEEEECCCCCCE-----------EEEECCCCEEEEEECCEEEEECCCCCEECCCCCCEEEEC
T ss_conf             499568989999668997147644889840-----------798268860774138989997678741001356279983


Q ss_pred             ECCCCCCEEEEEECCCCCCEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCEEEEEEC
Q ss_conf             02444320454202454302210232100134430036753101223133563799977998189986899809899960
Q batch____       153 SRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTAFGAAVVGGDNGRVSAVLMEQGQMIWQQRI  232 (392)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~d~~tG~~~w~~~~  232 (392)
                      ..                                        ..............+....+.++-.+...+...--+..
T Consensus        88 ~~----------------------------------------g~~~~~~~~~~~~~~~~~~~~iy~~~~~~~~~~~i~~~  127 (295)
T c3s25A_          88 RN----------------------------------------GHGSTVLDPDPCIYASLIGNYIYYLHYDTQTATSLYRI  127 (295)
T ss_dssp             TT----------------------------------------SCCCEEEECSCEEEEEEETTEEEEEEESSSSCEEEEEE
T ss_pred             CC----------------------------------------CCCEEEECCCCEEEEEECCCCEEEEEECCCCCEEEEEE
T ss_conf             68----------------------------------------87025301574022200265047888526774179982


Q ss_pred             CCCCCCCCCCCCCCCCCCEEEECCEEEEECCCCEEEEEECCCCCEEEECCCCCCCCEEEEEEEEEE--CCCCCEEEEEEC
Q ss_conf             687645442345642210477438078604786089992577512310344311102565200010--256311234326
Q batch____       233 SQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGNRIYL--VDQNDRVMALTI  310 (392)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~  310 (392)
                      ..........................+....+..++..+..+......................+.  ......++..+.
T Consensus       128 ~~~~~~~~~~~~~~~~~~~~~~~~iy~~~~~~~~i~~~~~~g~~~~~i~~~~~~~~~~~~~~~~y~~~~~~~~~I~~~~~  207 (295)
T c3s25A_         128 RIDGEEKKKIKNHYLFTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYDCNCYKPVVLDDTNVYYXDVNRDNAIVHVNI  207 (295)
T ss_dssp             ETTSCCCEEEESSCCCCSEEETTEEEEECTTTCCEEEEETTTTEEEEEECSCEEEEEEEETTEEEEEEGGGTTEEEEECS
T ss_pred             CCCCCCEEEEECCCCCCEEEECEEEEEECCCCCEEEEEECCCCCEEEEECCCCEEEEECCCCEEEEEECCCCCEEEEEEC
T ss_conf             48875169972355320023110489981899759999889985899963885144304554489982266871999977


Q ss_pred             CCCCEEEEEECCCCCCEEEEEEECCEEEEE--CCCCEEEEEECCCCCEEEEEECCCCCEEEEEEEECCEEEEEE-CCCEE
Q ss_conf             898277531046887226589979999997--899779999899982999997799836873698899999992-79849
Q batch____       311 DGGVTLWTQSDLLHRLLTSPVLYNGNLVVG--DSEGYLHWINVEDGRFVAQQKVDSSGFQTEPVAADGKLLIQA-KDGTV  387 (392)
Q Consensus       311 ~tg~~~w~~~~~~~~~~~~~~~~g~~i~~~--~~~G~l~~~d~~tG~~l~~~~~~~~~~~~~~~~~~g~l~v~~-~~G~l  387 (392)
                      ..++..+    ........+...++.+|..  ...+.|+.+|. +|..++.+.-+.   .....+.++.||... .+|+|
T Consensus       208 dG~~~~~----l~~~~~~~~~~~~~~~~y~~~~~~~~i~~~~~-dG~~~~~i~~~~---~~~i~i~~d~iy~~d~~~~~i  279 (295)
T c3s25A_         208 NNPNPVV----LTEANIEHYNVYGSLIFYQRGGDNPALCVVKN-DGTGFKELAKGE---FCNINVTSQYVYFTDFVSNKE  279 (295)
T ss_dssp             SSCCCEE----CSCSCEEEEEEETTEEEEEECSSSCEEEEEET-TSCCCEEEEESC---EEEEEECSSEEEEEETTTCCE
T ss_pred             CCCCEEE----EEECCEEEEEEECCEEEEEECCCCCEEEEEEC-CCCCEEEEECCC---CCCEEEECCEEEEEECCCCEE
T ss_conf             8986699----98156034354065189998079973999987-999879994478---541477889899995599729


Q ss_pred             EEEEC
Q ss_conf             99979
Q batch____       388 YSITR  392 (392)
Q Consensus       388 ~al~~  392 (392)
                      |+++.
T Consensus       280 y~~~~  284 (295)
T c3s25A_         280 YCTST  284 (295)
T ss_dssp             EEEES
T ss_pred             EEEEC
T ss_conf             99977