30 c3polA_ Probab=99.91   E-value=3.6e-23  Score=138.83  Aligned_columns=186  Identities=18%

Q ss_pred             CCEEEEEECCCCCCCCCCCCCCEEEECCEEHHHHHHHHHHHCCCCCEEEECCCHHHHH----HCCCEEEEEECCCCCCCH
Q ss_conf             8700999658888436867831325851878999999997228961899679269986----339706765137875317
Q batch____         5 TTITGVVLAGGKARRMGGVDKGLLELNGKPLWQHVADALMTQLSHVVVNANRHQEIYQ----ASGLKVIEDSLADYPGPL   80 (194)
Q Consensus         5 ~~i~aiIlAaG~gsRl~~~pK~l~~i~Gkpll~~~l~~l~~~~~~~~vvv~~~~~~~~----~~~~~~~~~~~~~~~~~~   80 (194)
                      +....||+|||.||||  +||+|++++|||||+|++++|.+.+....|+|+++.+...    .+.............+..
T Consensus         9 ~~~~vIi~A~~~s~Rl--~~K~Ll~v~Gkpli~~~i~~l~~~~~~~~iiVv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (262)
T c3polA_           9 HMKHIVIPARFSSSRL--PGKPLLLIHDRPMILRVVDQAKKVEGFDDLCVATDDERIAEICRAEGVDVVLTSADHPSGTD   86 (262)
T ss_dssp             CCEEEEEECCSCCTTS--TTGGGSEETTEEHHHHHHHHHTTCCSCSEEEEEESCHHHHHHHHTTTCEEEECCSCCCCHHH
T ss_pred             CCEEEEEECCCCCCCC--CCCEEEEECCEEHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHCCCCEEEECCCCCCCHH
T ss_conf             8759999448778899--87114436856579999999984899828999769588899997539949996488765126


Q ss_pred             HHHHHHHHHCCC--CEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEE---------------------------------
Q ss_conf             999999974798--839996189744799999999972689838998---------------------------------
Q batch____        81 AGMLSVMQQEAG--EWFLFCPCDTPYIPPDLAARLNHQRKDAPVVWV---------------------------------  125 (194)
Q Consensus        81 ~~~~~~~~~~~~--~~~~~~~~d~p~~~~~~i~~l~~~~~~~~~~~~---------------------------------  125 (194)
                      .+...+......  +.++++.+|.||++++.+..+++.+........                                 
T Consensus        87 ~~~~~~~~~~~~~~d~~~~~~~d~p~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  166 (262)
T c3polA_          87 RLSEVARIKGWDADDIIVNVQGDEPLLPAQLVQQVAKLLVDKPNCSMSTLCEPIHALDEFQRDSIVKVVMSKQNEALYFS  166 (262)
T ss_dssp             HHHHHHHHHTCCTTCEEEECCTTCTTCCHHHHHHHHHHHHHCTTCSEEEEEEECCCHHHHHCTTSCEEEECSSSBEEEEE
T ss_pred             HHHHHHHHHCCCCCCEEEEEECCCEEECHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHCCCCCCEEEEECCCCCEEEEE
T ss_conf             89999985004689889998289533359999999999997699357564454048767067771289986899587730


Q ss_pred             ---------------CCCCCCCCEEEEECHHHHHHHHHHHHCCCCCHHH-------HHHHCCCEEEEEECCCCEEEECCC
Q ss_conf             ---------------1378577326600599999999998828941689-------998579729995178762242699
Q batch____       126 ---------------HDGERDHPTIALVNRAIEPLLLEYLQAGERRVMV-------FMRLAGGHAVDFSDHKDAFVNVNT  183 (194)
Q Consensus       126 ---------------~~~~~~~~v~~~~~~~~~~~l~~~~~~g~~~~~~-------~~~~~~~~~~~~~~~~~~~~dIdT  183 (194)
                                     ....................+..+..........       .+-..+.....+......|+||||
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~e~~~~~~~l~~i~~g~~v~~~~~~~~~~~dIdt  246 (262)
T c3polA_         167 RATIPYDRDGAKRDEPTLHTQAFRHLGLYAYRVSLLQEYVTWEMGKLEKLESLEQLRVLENGHRIAIAVAEANLPPGVDT  246 (262)
T ss_dssp             SSCCSCCSSSSSSSSCCCCSCCEEEEEEEEEEHHHHHHHTTSCCCHHHHHHTCTTHHHHHTTCCEEEEECSSCCCCCCCS
T ss_pred             CCCCCCCCCCCHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCC
T ss_conf             23442222210123220121012111213322999998760487620134457789999689806999816202006889


Q ss_pred             HHHHHHHHH
Q ss_conf             899999984
Q batch____       184 PEELARWQE  192 (194)
Q Consensus       184 peDl~~a~~  192 (194)
                      ||||++||+
T Consensus       247 peDL~~ae~  255 (262)
T c3polA_         247 QADLDRLNN  255 (262)
T ss_dssp             HHHHHHHHT
T ss_pred             HHHHHHHHH
T ss_conf             999999999