28 c3js6A_ Probab=99.86   E-value=5.4e-20  Score=144.42  Aligned_columns=271  Identities=17%

Q ss_pred             CCCEEEEEECCCCEEEEEEEECCCEEEEECCCCCCCEEEEEEECC-------------------------CCCEEECHHH
Q ss_conf             882899998178828999993892689984899801038999879-------------------------9909963789
Q batch____         3 NAELAIGIDLGTTNSLIAVWKDGAAQLIPNKFGEYLTPSIISMDE-------------------------NNHILVGKPA   57 (556)
Q Consensus         3 ~~~~viGID~Gtt~s~va~~~~~~~~ii~~~~g~~~~Ps~v~~~~-------------------------~~~~~~G~~A   57 (556)
                      +...|+|||+|+++++++.           ......+||+|++..                         +..+.+|..|
T Consensus         1 ~n~~i~gID~G~~~tK~~~-----------~~~~~~~ps~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~vG~~a   69 (321)
T c3js6A_           1 SNVYVXALDFGNGFVKGKI-----------NDEKFVIPSRIGRKTNENNQLKGFVDNKLDVSEFIINGNNDEVLLFGNDL   69 (321)
T ss_dssp             CCEEEEEEEECSSEEEEEE-----------TTEEEEEESEEEECCSSCCSSTTTSCCCCSCEEEEETTCTTCCEEESTTH
T ss_pred             CCCEEEEEEECCCEEEEEE-----------CCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEECHHH
T ss_conf             9836899970873189998-----------89026743554146544332233454554321023331068278982577


Q ss_pred             HHHHHHCHHHHHHHHHHHCCCCCEEECCCCEECHHHHHHHHHHHHHHHHHHHHCCCCC-EEEEEECCCCCHHHHHHHHHH
Q ss_conf             8765428503111133523885204407924879999999999999999988198611-378851166789999999999
Q batch____        58 VSRRTSHPDKTAALFKRAMGSNTNWRLGSDTFNAPELSSLVLRSLKEDAEEFLQRPIK-DVVISVPAYFSDEQRKHTRLA  136 (556)
Q Consensus        58 ~~~~~~~~~~~~~~~k~~lg~~~~~~~~~~~~~~~ei~a~~L~~l~~~a~~~~~~~~~-~~vitvP~~~~~~~r~~~~~a  136 (556)
                      .....               ...........+..++....+|..+...+......... .+++.+|...-..+++.....
T Consensus        70 ~~~~~---------------~~~~~~~~~~k~~~~~~~~l~l~al~~~~~~~~~~~~~~~lv~gLP~~~~~~~~~~~~~~  134 (321)
T c3js6A_          70 DKTTN---------------TGKDTASTNDRYDIKSFKDLVECSIGLLAREVPEEVVNVVIATGXPSNEIGTDKQAKFEK  134 (321)
T ss_dssp             HHHCS---------------CCEECCCSTTGGGSHHHHHHHHHHHHHHHTTSCSSEEEEEEEEEECGGGTTSHHHHHHHH
T ss_pred             HHCCC---------------CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHH
T ss_conf             51154---------------534444456733675479999999999986237876304899728957876889999998


Q ss_pred             HHHCCC-------------CCEEEEECHHHHHHHHHHCCC------CCCCEEEEECCCCEEEEEEEEECCCEEEEEEECC
Q ss_conf             987499-------------713772073788888871144------8871589950896599999997697059999327
Q batch____       137 AELAGL-------------NAVRLINEPTAAAMAYGLHTQ------QNTRSLVFDLGGGTFDVTVLEYATPVIEVHASAG  197 (556)
Q Consensus       137 ~~~ag~-------------~~~~li~e~~Aaa~~~~~~~~------~~~~vlv~D~G~gt~dvsi~~~~~~~~~vi~~~~  197 (556)
                      ......             ..+.+++||.||.+++..+..      ....++|+|+|+||+|++++.   +..-+....+
T Consensus       135 ~~~~~~~v~~~g~~~~i~I~~v~V~pEg~ga~~~~~~~~~~~~~~~~~~~v~viDiG~gTtD~~~~~---~~~~~~~~~~  211 (321)
T c3js6A_         135 LLNKSRLIEIDGIAKTINVKGVKIVAQPXGTLLDLNXENGKVFKAFTEGKYSVLDFGSGTTIIDTYQ---NXKRVEEESF  211 (321)
T ss_dssp             HHSSCEEEEETTEEEEEEEEEEEEEEHHHHHHHHTTEETTEECHHHHTCEEEEEEECSSCEEEEEEE---TTEECGGGCE
T ss_pred             HHCCCEEEEECCEEEEEEEEEEEEEECCCHHHHHHCCCCCCCCCCCCCCCEEEEECCCCEEEEEEEE---CCEECCHHCC
T ss_conf             5048159998787899999999999575156653013444542223458579997589807999972---8500400004


Q ss_pred             CCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEEHHHHHHHHHHHHH
Q ss_conf             87548889999999999887176566455789999999999885215871688863279721689748899989999999
Q batch____       198 DNFLGGEDFTHMLVDEVLKRADVARTTLNESELAALYACVEAAKCSNQSPLHIRWQYQEETRECEFYENELEDLWLPLLN  277 (556)
Q Consensus       198 ~~~lGG~~iD~~l~~~l~~~~~~~~~~~~~~~~~~l~~~~e~~K~~ls~~~~i~~~~~~~~~~~~itr~~fe~~~~~~~~  277 (556)
                      ...+|+.++.+.|.+.+.+++...                                          ...++.+.+.+.++
T Consensus       212 ~~~~G~~~~~~~I~~~i~~~~~~~------------------------------------------~~id~~~~i~~~~~  249 (321)
T c3js6A_         212 VINKGTIDFYKRIASHVSTPRMIE------------------------------------------KGLEFKDEFYKEQD  249 (321)
T ss_dssp             EESCCHHHHHHHHHHHTCCHHHHH------------------------------------------SCCCCHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHCCCC------------------------------------------CCCCHHHHHHHHHH
T ss_conf             420128999999999975420444------------------------------------------32441789999999


Q ss_pred             HHHHHHHHHHHHCCCCHHHCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHC
Q ss_conf             999999999997299944567899988856507899999998089862145700227788999887423
Q batch____       278 RLRVPIEQALRDARLKPSQIDSLVLVGGASQMPLVQRIAVRLFGKLPYQSYDPSTIVALGAAIQAACRL  346 (556)
Q Consensus       278 ~i~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~i~~~i~~~f~~~i~~~~~~~~~va~Gaa~~a~~~~  346 (556)
                      ++.+-+...+...-.....++.|+++||++.+  +++.+++.|+..+....||..|.|+|.-.+|..+.
T Consensus       250 ~~~~~i~~~i~~~~~~~~~~~~vi~~GGGa~~--l~~~l~~~~~~~~~~~~n~~~aNa~G~~~~g~~~~  316 (321)
T c3js6A_         250 SLIEEVXSNFEITVGNINSIDRIIVTGGGANI--HFDSLSHYYSDVFEKADDSQFSNVRGYEKLGELLK  316 (321)
T ss_dssp             HHHHHHHHHHHHHTCCTTSCSEEEEESTTHHH--HHHHHHHHSSSCEECCSSGGGHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHCCCCCCCEEEEECCHHHH--HHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHH
T ss_conf             99999999999863030014559997224899--99999975497189849828999999999999977