3 c3rfaA_ Probab=99.89   E-value=3.2e-22  Score=161.80  Aligned_columns=209  Identities=18%

Q ss_pred             HEEEEEC---CCCCCCCCCCCHHHHHHCCCCCHHHHHCCCCCEECCCCCEEECHHHHCCHHHHHHHHHCCCCCCCCCCCC
Q ss_conf             1145507---9989997637865666302322047747034535137854666778168477899973021113432210
Q batch____        23 RLALFLQ---GCNLRCKNCHNPWTMGRCNDCGECVPQCPHQALQIVDGKVVWNAVVCEQCDTCLKRCPQHATPMAQSMSV   99 (287)
Q Consensus        23 r~~vf~~---GCnlrC~~C~Npe~~~~c~~c~~C~~~cp~~ai~~~~~~~~i~~~~c~~C~~C~~~C~~~a~~~~~~~~~   99 (287)
                      |.|+..+   |||++|.||+++.                                                ....+..+.
T Consensus        98 r~t~cissqvGC~~~C~FC~t~~------------------------------------------------~g~~R~ls~  129 (333)
T c3rfaA_          98 RATLCVSSQVGCALECKFCSTAQ------------------------------------------------QGFNRNLRV  129 (333)
T ss_dssp             CEEEECCCEEECSSCCTTCGGGT------------------------------------------------TCEEEECCH
T ss_pred             CEEEEEECCCCCCCCCEEEECCC------------------------------------------------CCCCCCCCH
T ss_conf             03899726757536670341124------------------------------------------------485013588


Q ss_pred             HHHHHHHHHHHHH-----------CCCCCCCC-CCCCCHHHHHHHHHHHH-HHHHHHCCCCEEEECCCCCCHHHHHHHHH
Q ss_conf             0134689986310-----------24443432-46642056899999999-86444269706863367779999998653
Q batch____       100 DEVLSHVRKAVLF-----------IEGITVSG-GEATTQLPFVVALFTAI-KNDPQLRHLTCLVDSNGMLSETGWEKLLP  166 (287)
Q Consensus       100 ~~~~~~~~~~~~~-----------~~~v~~sG-GEP~l~~~~l~~~~~~~-k~~~~~~g~~~~~~Tng~~~~~~~~~l~~  166 (287)
                      .+++.++......           ..++.++| |||+++.+.+.++++.+ ...+...+......++....+.+.+....
T Consensus       130 ~EIv~qv~~~~~~~~~~~~~~~~~i~~vv~~g~GEPl~n~~~v~~~l~~l~~~~gl~i~~~~itvst~g~~~~i~~L~~~  209 (333)
T c3rfaA_         130 SEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDM  209 (333)
T ss_dssp             HHHHHHHHHHHHHHCCHHHHSSCSCSEEEECSSSCGGGCHHHHHHHHHHHHSTTTTCCCGGGEEEEESCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHH
T ss_conf             99999999999864143320355421257505863224989999999985211552430112101575541789998731


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCC--------HHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCE
Q ss_conf             200111001100166547665357--------799999999999713520132101444578999999999999738980
Q batch____       167 VCDGAMLDLKAWGSECHQQLTGRD--------NQQIKRSIYLLAERGKLAELRLLVIPGQVDYLQHIEELAAFIKGLGDV  238 (287)
Q Consensus       167 ~~d~~~~dik~~~~~~~~~~~g~~--------~~~vl~~i~~l~~~~~~v~i~~~~i~~~nd~~e~i~~i~~~l~~~~~~  238 (287)
                      ..+.+.+|+++.+++.++++++..        .+.+.+.++...+.+.++.+.+++++|.||+++++++++++++++ ..
T Consensus       210 ~~~~l~isl~a~~~e~r~~l~p~~k~~~l~~i~~~~~~~~~~~~~~g~~v~i~y~li~g~nDs~e~a~~l~~~l~~~-~~  288 (333)
T c3rfaA_         210 IDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDT-PC  288 (333)
T ss_dssp             CCCEEEEECCCSSHHHHHHHSGGGGTSCHHHHHHHHHHHHHHCTTTTTCEEEEEEEBTTTTCSHHHHHHHHHHTTTS-CE
T ss_pred             CCCEEEECCCCCCHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCC-CC
T ss_conf             58489980677987786231406788899999999999999776439808998554089998989999999998508-98


Q ss_pred             EEEEECCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEE
Q ss_conf             8998453446875335418898989999999999980994574200
Q batch____       239 PVRLNAFHAHGVYGEAQSWASATPEDVEPLADALKVRGVSRLIFPA  284 (287)
Q Consensus       239 ~v~l~~~~p~g~~~~~~~~~~~~~e~~~~~~~~~~~~gi~~vv~~~  284 (287)
                      .++++||+|.    +...+.+|+.+.++++.++|++.|+...+|.+
T Consensus       289 ~Vnlip~nP~----~g~~~~~p~~e~i~~f~~~L~~~Gi~v~iR~~  330 (333)
T c3rfaA_         289 KINLIPWNPF----PGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKT  330 (333)
T ss_dssp             EEEEEECCCC----TTCCCCBCCHHHHHHHHHHHHHTTCEEEECCC
T ss_pred             EEEEEECCCC----CCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEE
T ss_conf             7999962468----88887788989999999999978986997641