BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (349 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P76162 Uncharacterized protein ydfU n=164 Tax=root RepI... 470 e-131 UniRef50_C4X6W4 Putative uncharacterized protein n=1 Tax=Klebsie... 445 e-123 UniRef50_B5QYR3 Phage protein n=42 Tax=root RepID=B5QYR3_SALEP 430 e-119 UniRef50_C8Q8J6 Putative uncharacterized protein n=3 Tax=root Re... 411 e-113 UniRef50_B4EVI5 Phage protein n=2 Tax=Proteus mirabilis RepID=B4... 411 e-113 UniRef50_A3MZM0 Putative uncharacterized protein n=1 Tax=Actinob... 380 e-104 UniRef50_A7JUB6 Hypothetical bacteriophage protein n=3 Tax=Paste... 378 e-103 UniRef50_C4TVC0 Putative uncharacterized protein n=1 Tax=Yersini... 364 2e-99 UniRef50_A3EHV6 Putative uncharacterized protein n=1 Tax=Vibrio ... 359 7e-98 UniRef50_A7MYK2 Putative uncharacterized protein n=2 Tax=Vibrio ... 326 8e-88 UniRef50_Q06262 Uncharacterized 36.0 kDa protein in doc-Gp10 int... 324 2e-87 UniRef50_Q7ME22 Putative uncharacterized protein VVA0862 n=1 Tax... 309 7e-83 UniRef50_C0B0V2 Putative uncharacterized protein n=2 Tax=Proteus... 299 2e-79 UniRef50_D2U458 Phage transcriptional regulator n=4 Tax=Enteroba... 171 3e-41 UniRef50_A3X1N6 Putative uncharacterized protein n=1 Tax=Nitroba... 121 4e-26 UniRef50_Q6V7S4 Bcep22gp20 n=3 Tax=root RepID=Q6V7S4_9CAUD 98 5e-19 UniRef50_A6WVD9 Putative uncharacterized protein n=1 Tax=Ochroba... 89 3e-16 UniRef50_A6UAT1 Putative uncharacterized protein n=1 Tax=Sinorhi... 85 4e-15 UniRef50_B7I7I6 Putative uncharacterized protein n=4 Tax=Acineto... 79 3e-13 UniRef50_A0KJW9 Putative uncharacterized protein n=5 Tax=Gammapr... 76 3e-12 UniRef50_A7ILD6 Putative uncharacterized protein n=2 Tax=Xanthob... 52 3e-05 UniRef50_C6BBU0 Putative uncharacterized protein n=1 Tax=Ralston... 52 3e-05 UniRef50_Q2FUP5 Phi PV83 orf 19-like protein n=90 Tax=root RepID... 51 6e-05 UniRef50_D0IZ16 Putative uncharacterized protein n=1 Tax=Comamon... 49 2e-04 UniRef50_A1TMU5 Putative uncharacterized protein n=1 Tax=Acidovo... 49 2e-04 UniRef50_A7MGK3 Putative uncharacterized protein n=7 Tax=Enterob... 49 3e-04 UniRef50_Q2G3W4 Putative uncharacterized protein n=1 Tax=Novosph... 49 3e-04 UniRef50_A4W6Z4 Putative uncharacterized protein n=5 Tax=Proteob... 48 4e-04 UniRef50_Q5VJ21 Putative uncharacterized protein n=1 Tax=Aeromon... 48 5e-04 UniRef50_B9L925 MutS-related protein n=1 Tax=Nautilia profundico... 47 8e-04 UniRef50_B2U8H4 Putative uncharacterized protein n=1 Tax=Ralston... 47 9e-04 UniRef50_C6JMX6 Predicted protein n=1 Tax=Fusobacterium varium A... 47 0.001 UniRef50_B4BNF1 HNH nuclease n=3 Tax=Geobacillus RepID=B4BNF1_9BACI 46 0.002 UniRef50_C7XUW3 Putative uncharacterized protein n=1 Tax=Lactoba... 46 0.003 UniRef50_UPI0001BC4568 hypothetical protein FuD12_02539 n=1 Tax=... 46 0.003 UniRef50_Q03VL2 Putative uncharacterized protein n=1 Tax=Leucono... 45 0.003 UniRef50_A1TN12 Putative uncharacterized protein n=3 Tax=Acidovo... 45 0.004 UniRef50_Q03RB7 Putative uncharacterized protein n=1 Tax=Lactoba... 44 0.005 UniRef50_A6M989 Putative uncharacterized protein n=1 Tax=Geobaci... 44 0.007 UniRef50_UPI0001BCECFE hypothetical protein SnoxA4_08445 n=1 Tax... 43 0.015 UniRef50_C7QFC8 HNH endonuclease n=1 Tax=Catenulispora acidiphil... 42 0.021 UniRef50_B5W3B8 HNH endonuclease n=1 Tax=Arthrospira maxima CS-3... 42 0.035 UniRef50_B1ZMM6 HNH endonuclease n=1 Tax=Opitutus terrae PB90-1 ... 42 0.045 UniRef50_A3X5U3 Putative uncharacterized protein n=2 Tax=Alphapr... 41 0.055 >UniRef50_P76162 Uncharacterized protein ydfU n=164 Tax=root RepID=YDFU_ECOLI Length = 349 Score = 470 bits (1208), Expect = e-131, Method: Composition-based stats. Identities = 349/349 (100%), Positives = 349/349 (100%) Query: 1 MRVLLRPVLVPELGLVVLKPGRESIQIFHNPRVLVEPEPKSMRNLPSGVVPAVRQPLAED 60 MRVLLRPVLVPELGLVVLKPGRESIQIFHNPRVLVEPEPKSMRNLPSGVVPAVRQPLAED Sbjct: 1 MRVLLRPVLVPELGLVVLKPGRESIQIFHNPRVLVEPEPKSMRNLPSGVVPAVRQPLAED 60 Query: 61 KTLLPFFSNERVIRAAGGVGALSDWLLRHVTSCQWPNGDYHHTETVIHRYGTGAMVLCWH 120 KTLLPFFSNERVIRAAGGVGALSDWLLRHVTSCQWPNGDYHHTETVIHRYGTGAMVLCWH Sbjct: 61 KTLLPFFSNERVIRAAGGVGALSDWLLRHVTSCQWPNGDYHHTETVIHRYGTGAMVLCWH 120 Query: 121 CDNQLRDQTSESLELLAQQNLTAWVIDVIRHAISGTQERELSLAELSWWAVCNQVVDALP 180 CDNQLRDQTSESLELLAQQNLTAWVIDVIRHAISGTQERELSLAELSWWAVCNQVVDALP Sbjct: 121 CDNQLRDQTSESLELLAQQNLTAWVIDVIRHAISGTQERELSLAELSWWAVCNQVVDALP 180 Query: 181 EAVSRRSLGLPAEKICSVYRESDIVPGELTATSILKQRTKNLAPLPYAHQQQKSPQEKTV 240 EAVSRRSLGLPAEKICSVYRESDIVPGELTATSILKQRTKNLAPLPYAHQQQKSPQEKTV Sbjct: 181 EAVSRRSLGLPAEKICSVYRESDIVPGELTATSILKQRTKNLAPLPYAHQQQKSPQEKTV 240 Query: 241 VSITVDPESPESFMKLPKRRRWVKEKYTRWVKTQPCACCGMPADDPHHLIGHGQGGMGTK 300 VSITVDPESPESFMKLPKRRRWVKEKYTRWVKTQPCACCGMPADDPHHLIGHGQGGMGTK Sbjct: 241 VSITVDPESPESFMKLPKRRRWVKEKYTRWVKTQPCACCGMPADDPHHLIGHGQGGMGTK 300 Query: 301 AHDLFVLPLCRKHHNELHTDTVAFEDKYGSQLELIFRFIDRALAIGVLA 349 AHDLFVLPLCRKHHNELHTDTVAFEDKYGSQLELIFRFIDRALAIGVLA Sbjct: 301 AHDLFVLPLCRKHHNELHTDTVAFEDKYGSQLELIFRFIDRALAIGVLA 349 >UniRef50_C4X6W4 Putative uncharacterized protein n=1 Tax=Klebsiella pneumoniae NTUH-K2044 RepID=C4X6W4_KLEPN Length = 354 Score = 445 bits (1145), Expect = e-123, Method: Composition-based stats. Identities = 178/350 (50%), Positives = 244/350 (69%), Gaps = 3/350 (0%) Query: 1 MRVLLRPVLVPELGLVVLKPGRESIQIFHNPRVLVEPEPKSMRNLPSGVVPAVRQPLAED 60 +R LL P +VP LG+V+ KPG+E + +F RVL+ P+P+ M P+G VP RQPL+ D Sbjct: 3 LRGLLTPEIVPRLGVVLFKPGKELMSLFAQGRVLITPQPEYMAGFPTGKVPDARQPLSVD 62 Query: 61 KTLLPFFSNERVIRAAGGVGALSDWLLRHVTSCQWPNGDYHHTETVIHRYGTGAMVLCWH 120 ++L+PFF++ RVI AAGG+ L WL V CQ + YHH ETVI R G+++LCWH Sbjct: 63 RSLVPFFTDPRVITAAGGIEGLERWLSLSVRQCQNHDEGYHHIETVILRQDPGSVLLCWH 122 Query: 121 CDNQLRDQTSESLELLAQQNLTAWVIDVIRHAISGTQERELSLAELSWWAVCNQVVDALP 180 CDN+LRD+ +++ +A +N+ WVID++ ++ T+ER LSLAEL WWAV + + DA+ Sbjct: 123 CDNKLRDEPDPAIKEIASRNVIDWVIDMVLLSLGCTRERTLSLAELCWWAVQSGISDAIT 182 Query: 181 EAVSRRSLGLPAEKICSVYRESDIVPGELTATSILKQRTKNLAPLPYAHQQQKSPQE--K 238 EA++ ++L + E SVYR+SDI+P + A ILK+R Q+ + Sbjct: 183 EAMAEKALRIAPEPHRSVYRDSDIIPA-IPAADILKRRLDKRESHAITGGLVTGDQDAGR 241 Query: 239 TVVSITVDPESPESFMKLPKRRRWVKEKYTRWVKTQPCACCGMPADDPHHLIGHGQGGMG 298 ++ + VDP+ PE+FM PKRRRW+ +YT+WVKTQ CACC PADDPHH+IGHG GG Sbjct: 242 PILRLGVDPDCPEAFMLRPKRRRWICPQYTQWVKTQECACCRQPADDPHHIIGHGMGGTA 301 Query: 299 TKAHDLFVLPLCRKHHNELHTDTVAFEDKYGSQLELIFRFIDRALAIGVL 348 TKAHDLFV+PLCR HH+ELH + +AFE+KYGSQLEL+ RF+DRAL IGV+ Sbjct: 302 TKAHDLFVIPLCRAHHDELHANLIAFEEKYGSQLELLIRFLDRALGIGVI 351 >UniRef50_B5QYR3 Phage protein n=42 Tax=root RepID=B5QYR3_SALEP Length = 329 Score = 430 bits (1106), Expect = e-119, Method: Composition-based stats. Identities = 188/349 (53%), Positives = 236/349 (67%), Gaps = 20/349 (5%) Query: 1 MRVLLRPVLVPELGLVVLKPGRESIQIFHNPRVLVEPEPKSMRNLPSGVVPAVRQPLAED 60 MR LL P + P +G+V+ +PG E + +F RVL+EPEP+ + G VPAV QPLA+D Sbjct: 1 MRALLTPEIAPRMGVVLFRPGSELMPLFMQGRVLLEPEPEQYSSFACGAVPAVSQPLADD 60 Query: 61 KTLLPFFSNERVIRAAGGVGALSDWLLRHVTSCQWPNGDYHHTETVIHRYGTGAMVLCWH 120 + F NE VI AGG+ +L WLLR CQWP+ +H + R+ GA+ LCWH Sbjct: 61 PAVRDVFRNESVIYRAGGLDSLESWLLRG-NGCQWPHSVWHSEQMTTMRHAPGAIRLCWH 119 Query: 121 CDNQLRDQTSESLELLAQQNLTAWVIDVIRHAISGTQERELSLAELSWWAVCNQVVDALP 180 CDN LR+Q +E LE +A +N T WV+ V+ + ++L EL WW V N + + LP Sbjct: 120 CDNLLREQFTERLESIAVENTTKWVLSVVCRDLGFDDMHAVTLPELCWWMVRNDLAEVLP 179 Query: 181 EAVSRRSLGLPAEKICSVYRESDIVPGELTATSILKQRTKNLAPLPYAHQQQKSPQEKTV 240 E+ +R++L +P + S RES+IVP + ATSI++ + K V Sbjct: 180 ESAARKALRMPKAIVQSATRESEIVPS-VPATSIVQDKA------------------KKV 220 Query: 241 VSITVDPESPESFMKLPKRRRWVKEKYTRWVKTQPCACCGMPADDPHHLIGHGQGGMGTK 300 +++ VDPESPESFM PKRRRW+ E+YTRWVK+QPCACCG ADDPHHL GHGQGGMGTK Sbjct: 221 LALRVDPESPESFMLRPKRRRWINERYTRWVKSQPCACCGKQADDPHHLTGHGQGGMGTK 280 Query: 301 AHDLFVLPLCRKHHNELHTDTVAFEDKYGSQLELIFRFIDRALAIGVLA 349 AHDLFVLPLCR HHNELH DTVAFE+KYGSQLELIFRFIDRALAIGVLA Sbjct: 281 AHDLFVLPLCRTHHNELHADTVAFEEKYGSQLELIFRFIDRALAIGVLA 329 >UniRef50_C8Q8J6 Putative uncharacterized protein n=3 Tax=root RepID=C8Q8J6_9ENTR Length = 338 Score = 411 bits (1056), Expect = e-113, Method: Composition-based stats. Identities = 164/352 (46%), Positives = 216/352 (61%), Gaps = 21/352 (5%) Query: 1 MRVLLRPVLVPELGLVVLKPGRESIQIFHNPRVLVEPEPKSMRNLPSGVVPAVRQPLAED 60 MR LL P LVP +G+V+ KPG++ +F RVL+ M +LPSG++ QPL ++ Sbjct: 1 MRALLTPELVPRIGVVLFKPGKDLHSLFR-GRVLISTPTSEMADLPSGLINDSSQPLLDE 59 Query: 61 KTLLPFFSNERVIRAAGGVGALSDWLLRHVTSCQW-PNGDYHHTETVIHRYGTGAMVLCW 119 K+L FF + RVIRAAGG A W+ + + +CQ YHH R +G + LC+ Sbjct: 60 KSLAVFFQDGRVIRAAGGWEAHDAWVQK-INACQLQKKDSYHHPHYTTLRTESGTVCLCY 118 Query: 120 HCDNQLR-DQTSESLELLAQQNLTAWVIDVIRHAISGTQERELSLAELSWWAVCNQVVDA 178 H DN R + LE +A N+ W+I+ + + ++L EL WWA N V D Sbjct: 119 HDDNSARLNGLPAQLEEVATGNMARWIIESACVHMGLGSDHRMTLPELCWWACLNDVTDL 178 Query: 179 LPEAVSRRSLGLPAEKIC-SVYRESDIVPGELTATSILKQRTKNLAPLPYAHQQQKSPQE 237 +PEA +RR L +PAEK +ES I P Q+ + Sbjct: 179 IPEAPARRVLRMPAEKPATGELKESRIQP----------------ERAAREVIQEAAEVV 222 Query: 238 KTVVSITVDPESPESFMKLPKRRRWVKEKYTRWVKTQPCACCGMPADDPHHLIGHGQGGM 297 K V+++ +DPESPESFMK PKRRR EKYTRWVK QPCACC PADDPHH+IG+GQGGM Sbjct: 223 KAVINLAIDPESPESFMKRPKRRRLENEKYTRWVKAQPCACCNKPADDPHHIIGYGQGGM 282 Query: 298 GTKAHDLFVLPLCRKHHNELHTDTVAFEDKYGSQLELIFRFIDRALAIGVLA 349 GTKAHDLFV+PLCR HH+ELH D VAFE+KYGSQ+EL+FRF+D ++A+GV+ Sbjct: 283 GTKAHDLFVIPLCRAHHDELHRDPVAFENKYGSQIELLFRFLDHSIAVGVIG 334 >UniRef50_B4EVI5 Phage protein n=2 Tax=Proteus mirabilis RepID=B4EVI5_PROMH Length = 341 Score = 411 bits (1056), Expect = e-113, Method: Composition-based stats. Identities = 142/355 (40%), Positives = 219/355 (61%), Gaps = 22/355 (6%) Query: 1 MRVLLRPVLVPELGLVVLKPGRESIQIFH-NPRVLVEPEPKSMRNLPSGVVPAVRQPLAE 59 M++LL P + +LG+V+LKPG E ++ F + RV++ PKS+ PSG + QPL + Sbjct: 1 MKLLLTPYIQSDLGVVLLKPGAELLKQFKPHSRVIISDVPKSLDKWPSGALTGNEQPLLD 60 Query: 60 DKTLLPFFSNERVIRAAGGVGALSDWLLRHVTSCQWPN--GDYHHTETVIHRYGTGAMVL 117 +K ++ F +N++V++A GG+ +++ W+ R++ CQ + YHH E + G + Sbjct: 61 NKGIVDFLNNKKVLQAMGGLSSMNMWIGRNIHCCQINDKHDSYHHHELTTTWHKDGVIRT 120 Query: 118 CWHCDNQLRDQTSESLELLAQQNLTAWVIDVIRHAISGTQERELSLAELSWWAVCNQVVD 177 CW+ DN +R ++E + LA +N AW++D IR + L++ + +AV +++VD Sbjct: 121 CWYHDNHIRHSSAEWVAELAHKNRIAWMVDTIRSRLRLDDSHSLTIPDFFAFAVMHKLVD 180 Query: 178 ALPEAVSRRSLGLPAE----KICSVYRESDIVPGELTATSILKQRTKNLAPLPYAHQQQK 233 LP+A+ RR L P + ++ + E+DIVP E+TA S + R + Sbjct: 181 KLPDAILRRILNWPDKTKDRRVHGGFPEADIVPNEVTALSAMNARLDAI----------- 229 Query: 234 SPQEKTVVSITVDPESPESFMKLPKRRRWVKEKYTRWVKTQPCACCGMPADDPHHLIGHG 293 K V+++TVDPE P SF+ PK RW ++ +WVKTQPC CG ADDPHH+IGHG Sbjct: 230 ----KPVINVTVDPEPPASFLLKPKMCRWENTQWLQWVKTQPCCVCGQQADDPHHIIGHG 285 Query: 294 QGGMGTKAHDLFVLPLCRKHHNELHTDTVAFEDKYGSQLELIFRFIDRALAIGVL 348 GGMGTKAHDLF +PLCR+HH+ELH D +E YG+Q+EL+F F++R+L +G L Sbjct: 286 MGGMGTKAHDLFTIPLCRQHHDELHHDPKLWEATYGNQIELLFSFLNRSLGMGAL 340 >UniRef50_A3MZM0 Putative uncharacterized protein n=1 Tax=Actinobacillus pleuropneumoniae L20 RepID=A3MZM0_ACTP2 Length = 340 Score = 380 bits (975), Expect = e-104, Method: Composition-based stats. Identities = 123/351 (35%), Positives = 180/351 (51%), Gaps = 23/351 (6%) Query: 3 VLLRPVLVPELGLVVLKPGRESIQIFHNPRVLVEPEPKSMRNLPSGVVPAVR--QPLAED 60 +LL+P E G+V + ++ R ++ P S++ PSG + + Q Sbjct: 5 LLLKPYFQTEAGIVFYRIPPTVNKLAFGERTILMPATDSLKTQPSGKIGVAKNLQNSTAC 64 Query: 61 KTLLPFFSNERVIRAAGGVGALSDWLLRHVTSCQWPNGDYHHTETVIHRYGTGAMVLCWH 120 L F +E V +AAGG LS W+ R + CQ +G Y H E + R TG + CWH Sbjct: 65 PQLADFTKSELVRKAAGGEAELSKWV-RKIAICQCRDGAYCHKEMTVTRTATGFIRTCWH 123 Query: 121 CDN--QLRDQTSESLELLAQQNLTAWVIDVIRHAISGTQERELSLAELSWWAVCNQVVDA 178 D + + E L LA+ N ++ IR + + L+L L WA+ V A Sbjct: 124 HDGIAHRGEASEEELNALAEANWVQFIGYKIRQDLQMQADESLNLGCLLAWAIAKNCVSA 183 Query: 179 LPEAVSRRSLGLPAEKICSVYRESDIVPGELTATSILKQRTKNLAPLPYAHQQQKSPQEK 238 + E+ RR L LP +++ +RES E + + + Sbjct: 184 IDESDLRRLLNLPQKEVPD-HRESTTYAAEQADPHKIFKTLA-----------------Q 225 Query: 239 TVVSITVDPESPESFMKLPKRRRWVKEKYTRWVKTQPCACCGMPADDPHHLIGHGQGGMG 298 ++ + DPE P SFM PK +R+ K+ ++VK+QPC CCG ADDPHH+IG G+G MG Sbjct: 226 PILKLKADPEPPASFMAKPKEKRFESSKWLQFVKSQPCVCCGKRADDPHHIIGQGRGKMG 285 Query: 299 TKAHDLFVLPLCRKHHNELHTDTVAFEDKYGSQLELIFRFIDRALAIGVLA 349 +K HDLFV+PLCR HHNELH + FE YG Q +L+FRF+DRAL++ L+ Sbjct: 286 SKEHDLFVIPLCRVHHNELHCNAQLFEQNYGKQTDLLFRFLDRALSLEALS 336 >UniRef50_A7JUB6 Hypothetical bacteriophage protein n=3 Tax=Pasteurellaceae RepID=A7JUB6_PASHA Length = 342 Score = 378 bits (970), Expect = e-103, Method: Composition-based stats. Identities = 119/353 (33%), Positives = 171/353 (48%), Gaps = 26/353 (7%) Query: 3 VLLRPVLVPELGLVVLKPGRESIQIFHNPRVLVEPEPKSMRNLPSGVVPAVRQPLAEDKT 62 +LL P E+G+V K ++ R L++P P + + SG V K Sbjct: 5 LLLTPYFQTEVGIVFYKVPKDVSPAAFGERTLLQPAPTDLATVKSGKVANFSANSTACKE 64 Query: 63 LLPFFSNERVIRAAGGVGALSDWL-----LRHVTSCQWPNGDYHHTETVIHRYGTGAMVL 117 L F + +V A S+ L ++ + Q +G Y H E V GA+ L Sbjct: 65 LAEFAKSAKVRSALNQRDKYSNDLPYTRFVKSIQKYQCRDGKYCHPEKVFVENEKGAVQL 124 Query: 118 CWHCDNQLRDQ--TSESLELLAQQNLTAWVIDVIRHAISGTQERELSLAELSWWAVCNQV 175 CW+ D D +E LE LA +N ++ IR + TQ + A+L +A + Sbjct: 125 CWYHDKMRMDGEIPNEKLEALADENWEKFIAQQIRLTLRKTQSSAIEFADLVLFASIKGL 184 Query: 176 VDALPEAVSRRSLGLPAEKICSVYRESDIVPGELTATSILKQRTKNLAPLPYAHQQQKSP 235 +D L ++ LG P V +ES+I +P A K Sbjct: 185 LDELDSNALQQFLGYPPLNNSGVSKESNI----------------GFDDVPNARANLKKW 228 Query: 236 QEKTVVSITVDPESPESFMKLPKRRRWVKEKYTRWVKTQPCACCGMPADDPHHLIGHGQG 295 E + + V+PE +FM PK +R+ K+ ++VK QPC CCG ADDPHH+IG+G G Sbjct: 229 AE--TLKLKVEPEPLAAFMAKPKLQRFEWRKWLQFVKAQPCMCCGQQADDPHHIIGYG-G 285 Query: 296 GMGTKAHDLFVLPLCRKHHNELHTDTVAFEDKYGSQLELIFRFIDRALAIGVL 348 MG+K HDLF LPLCR HH+ELH + FE YGSQLEL+ +F+DRA+ +G L Sbjct: 286 AMGSKQHDLFTLPLCRIHHDELHRNVGKFEQDYGSQLELLIKFLDRAIGLGAL 338 >UniRef50_C4TVC0 Putative uncharacterized protein n=1 Tax=Yersinia kristensenii ATCC 33638 RepID=C4TVC0_YERKR Length = 321 Score = 364 bits (934), Expect = 2e-99, Method: Composition-based stats. Identities = 144/339 (42%), Positives = 198/339 (58%), Gaps = 22/339 (6%) Query: 15 LVVLKPGRESIQIFHNPRVLVEPEPKSMRNLPSGVVPAVRQPLAEDKTLLPFFSNERVIR 74 +V+LKPG + + + + R+LV EP+ ++LPSG +P Q LA D LLPFF +ERVI Sbjct: 1 MVILKPGVDLLP-YMSGRLLVATEPEEFKSLPSGALPVAIQQLANDPRLLPFFEHERVIN 59 Query: 75 AAGGVGALSDWLLRHVTSCQWPNGDYHH-TETVIHRYGTGAMVLCWHCDNQLRDQTSESL 133 AAGG L+ W+ + + CQW + D H YG ++ LCWH DN+LR+ T L Sbjct: 60 AAGGHRLLATWV-KQLKECQWHDPDDTHVQNLTTLSYGQRSIRLCWHHDNKLREHTLPRL 118 Query: 134 ELLAQQNLTAWVIDVIRHAISGTQERELSLAELSWWAVCNQVVDALPEAVSRRSLGL-PA 192 E LA NL +W+I I + +L++ EL WWAV N+V D LP++++R SL + PA Sbjct: 119 EQLATSNLISWIISTICSHFRLPEGHQLTMPELCWWAVVNEVSDQLPDSIARASLRMLPA 178 Query: 193 EKICSVYRESDIVPGELTATSILKQRTKNLAPLPYAHQQQKSPQEKTVVSITVDPESPES 252 RESDI P P + K Q K V+++ +D E P S Sbjct: 179 VMKSGPTRESDI----------------TWTPNPTQIIENKVEQVKKVLALKIDDEPPAS 222 Query: 253 FMKLPKRRRWVKEKYTRWVKTQPCACCGMPADDP--HHLIGHGQGGMGTKAHDLFVLPLC 310 FM++PKR RW K+ +WVK+Q C CG ADDP G GQGGMGTKAHDLF +PLC Sbjct: 223 FMRIPKRYRWESAKWLKWVKSQQCCGCGSSADDPHHIIGHGQGQGGMGTKAHDLFTIPLC 282 Query: 311 RKHHNELHTDTVAFEDKYGSQLELIFRFIDRALAIGVLA 349 R H+ LH D +E ++GSQ+ L F F+DR+++IG +A Sbjct: 283 RLCHDALHADMHTWEAEHGSQVVLWFHFMDRSISIGAMA 321 >UniRef50_A3EHV6 Putative uncharacterized protein n=1 Tax=Vibrio cholerae V51 RepID=A3EHV6_VIBCH Length = 342 Score = 359 bits (922), Expect = 7e-98, Method: Composition-based stats. Identities = 110/364 (30%), Positives = 173/364 (47%), Gaps = 40/364 (10%) Query: 3 VLLRPVLVPELGLVVLKPGRESI----QIFHNPRVLVEPEPKSMRNLPSGVVPAVRQPLA 58 ++L+P L P+LG+V+ KPG+ + ++ R+++ P P + +PSG + + Sbjct: 2 LVLQPFLQPDLGIVMFKPGKTLLTELVKMSQGNRLVLMPLPDELVTVPSGKLNKPILSSS 61 Query: 59 E------------DKTLLPFFSNERVIRAAGGVGALSDWLLRHVTSCQWPNGDYHHTETV 106 + D L+ FF +E V R G L W+ + CQ +G+Y Sbjct: 62 DNQEDHLLDGCLLDGCLIDFFLDEEVQRRLSG---LKHWV-ELIPHCQLSDGEYCDKNLT 117 Query: 107 IHRYGTGAMVLCWHCDNQLRDQTSESLELLAQQNLTAWVIDVIRHAISGTQERELSLAEL 166 G + CWH DNQ R + S + +A++N+ W + I + R+ SL EL Sbjct: 118 TLSTDKGMVKCCWHHDNQERREPSIHAKQVAEKNVILWAEERISANLKL--NRKPSLHEL 175 Query: 167 SWWAVCNQVVDALPEAVSRRSLGLPAEKICSVYRESDIVPGELTATSILKQRTKNLAPLP 226 WW V N + + LP+ + ++LG+ E+ Y + R L Sbjct: 176 CWWTVLNGLYEKLPQVIVEKALGIRQEQKADQYM-------------VKMDRDDRL---- 218 Query: 227 YAHQQQKSPQEKTVVSITVDPESPESFMKLPKRRRWVKEKYTRWVKTQPCACCGMPADD- 285 + QQ + + +TVD E P FM PK + W EKY ++V++ PC G D Sbjct: 219 FFDAQQSLNSRVSAIELTVDDEPPAMFMARPKEKTWHSEKYLKFVRSLPCVITGKTTDVV 278 Query: 286 PHHLIGHGQGGMGTKAHDLFVLPLCRKHHNELHTDTVAFEDKYGSQLELIFRFIDRALAI 345 HHLIGHG+G M K+HDLF +P+ H + H D A+E K+GSQL + + I +AL + Sbjct: 279 AHHLIGHGEGKMAGKSHDLFTIPIHTDEHRKFHDDPKAWEAKHGSQLFYVKQTIKKALDL 338 Query: 346 GVLA 349 G L Sbjct: 339 GALT 342 >UniRef50_A7MYK2 Putative uncharacterized protein n=2 Tax=Vibrio harveyi group RepID=A7MYK2_VIBHB Length = 323 Score = 326 bits (835), Expect = 8e-88, Method: Composition-based stats. Identities = 103/345 (29%), Positives = 163/345 (47%), Gaps = 33/345 (9%) Query: 9 LVPEL--GLVVLKPGRESI-QIFHNPRV-LVEPEPKSMRNLPSGVVPAVRQPLAEDKTLL 64 +VP L ++ L P +S+ + + ++ LV P + G+ ++D +L+ Sbjct: 8 IVPTLNAAVIALTPNTQSLTSLLVDGKIGLVSPNQRLATKTAGGL-------SSDDSSLV 60 Query: 65 PFFSNERVIRAAGGVGALSDWLLRHVTSCQWPNGDYHHTETVIHRYGTGAMVLCWHCDNQ 124 FF++E V G D ++ CQ + Y + G GA+ LCWH DN Sbjct: 61 AFFAHENVQLLIGSTVKYVD----TISECQLKDEGYCNHNLKTRVTGEGAIRLCWHHDNM 116 Query: 125 LRDQTSESLELLAQQNLTAWVIDVIRHAISGTQERELSLAELSWWAVCNQVVDALPEAVS 184 D S +A++N + V+ + ++ R ++ +L WWAV N V + LP++V Sbjct: 117 ADD--SHQAYSIARKNTVRHGLMVVSRQLH-SEVRRITGVDLCWWAVRNDVYELLPQSVI 173 Query: 185 RRSLGLPAEKICSVYRESDIVPGELTATSILKQRTKNLAPLPYAHQQQKSPQEKTVVSIT 244 R A +V R V G + T + Q + K V+ + Sbjct: 174 ERQFKREA----TVKRVG--VKGNID--------TDARYMVESQRAQLERLA-KPVLKLV 218 Query: 245 VDPESPESFMKLPKRRRWVKEKYTRWVKTQPCACCGMPADDPHHLIGHGQGGMGTKAHDL 304 +D + P +++ PK RW EKY +V+ PC CG A HHLIGHG+G MG+KA D+ Sbjct: 219 IDDDPPAMYLRKPKPIRWESEKYLSFVRKLPCRVCGKTAGIAHHLIGHGEGKMGSKASDM 278 Query: 305 FVLPLCRKHHNELHTDTVAFEDKYGSQLELIFRFIDRALAIGVLA 349 F PLC +HH ELH D +E ++G QL + I+RAL +G + Sbjct: 279 FTFPLCNEHHQELHRDMNTWERQHGDQLWHVKETINRALVVGAVG 323 >UniRef50_Q06262 Uncharacterized 36.0 kDa protein in doc-Gp10 intergenic region n=4 Tax=root RepID=YORA_BPP1 Length = 312 Score = 324 bits (831), Expect = 2e-87, Method: Composition-based stats. Identities = 84/321 (26%), Positives = 148/321 (46%), Gaps = 22/321 (6%) Query: 35 VEPEPKSM-RNLPSGVVPAVRQPLAEDKTLLPFFSNERVIRAAGGVGALSDWLLRHVTSC 93 +EP P+ + ++ G+V Q +A ++ L PFF+++ + R GG+ AL WL R C Sbjct: 1 MEPVPRELIEHMEDGLV-VTEQTMATNEALQPFFNSDELFRRIGGIDALVAWLRRKEGQC 59 Query: 94 QWPNGDYHHTETVIHRYGTGAMVLCWHCDNQLRDQTSESLELLAQQNLTAWVIDVIRHAI 153 Q + + V A++LCWH DN R + L+ N W++DV R + Sbjct: 60 QAADRSWCDNHIVHAERDNSAVLLCWHHDNHYRMRGFNELKETLHNNRVNWILDVARQEM 119 Query: 154 SGTQERELSLAELSWWAVCNQVVDALPEAVSRRSLG--LPAEKICSVYRESDIVPGELTA 211 + +LS+ EL WWA ++ +PE V R S+ + +E+DI P + A Sbjct: 120 GLSNSHDLSIQELCWWAFMRNMMHLMPEEVCRISINKMKATPQDSGPLKEADIRPYDDRA 179 Query: 212 TSILKQRTKNLAPLPYAHQQQKSPQEKTVVSITVDPESPESFMKLPKRRRWVKEKYTRWV 271 T+ ++ +++ +P V + VD + + K+PK + +Y +V Sbjct: 180 TAYVQMM-----------EERSAPMRAKVCPVDVDSDPGMAHFKIPKLQSLKLPEYMDFV 228 Query: 272 KTQPCACCGMPADDPH---HLIGHGQGGMGTKAHDLFVLPLCRKHHNELHTDTVAFEDKY 328 ++PC CG H +++ H + AHD++ +PLC+ ++ D +E + Sbjct: 229 ASRPCCGCGAAGRGAHITPYIVRHSR----LCAHDIYAIPLCQSCQRDIERDRYNWEKTH 284 Query: 329 GSQLELIFRFIDRALAIGVLA 349 G F D AL +GV+ Sbjct: 285 GRLAMHQRLFFDYALGVGVIT 305 >UniRef50_Q7ME22 Putative uncharacterized protein VVA0862 n=1 Tax=Vibrio vulnificus YJ016 RepID=Q7ME22_VIBVY Length = 348 Score = 309 bits (792), Expect = 7e-83, Method: Composition-based stats. Identities = 96/365 (26%), Positives = 156/365 (42%), Gaps = 55/365 (15%) Query: 8 VLVPELGLVVLKPG-RESIQIFHNPRVLVEPEPKSMRNLPSG--------VVPAVRQPLA 58 + +P+LG+ +L G S+ + R L++P P S+ + G ++ + ++ + Sbjct: 16 IPIPQLGITLLNTGDHTSLMQDLDGRALIQPVPLSLIHRSDGPVVVDAVTLIASEKETVR 75 Query: 59 EDKTLLPFFSNERVIRAAGGVGALSDWLLRHVTSCQWPNGDYHHTETVIHRYGTGAMVLC 118 D +LLPFF++ V + + D + CQ + +H + GA+ LC Sbjct: 76 RDLSLLPFFAHPDVDKLFDPIEKHVD----RIPRCQAKSEHCNHNLLTVKLENGGAIRLC 131 Query: 119 WHCDNQLRDQTSESLELLAQQNLTAWVIDVIRHAISGTQERELSLAELSWWAVCNQVVDA 178 WH D L + ++ A NL + +V+ + G+ L++ EL WWAV N+V A Sbjct: 132 WHHD--LHREEVVGIDSKAATNLIVFRSNVVSVRLHGS-VLPLTMPELCWWAVRNKVYHA 188 Query: 179 LP----------EAVSRRSLGLPAEKICSVYRESDIVPGELTATSILKQRTKNLAPLPYA 228 LP E RR G + Y + D Sbjct: 189 LPHDLLSKIFEEEKTRRRVGGRGYIDTNARYIQQDSR----------------------- 225 Query: 229 HQQQKSPQEKTVVSITVDPESPESFMKLPKRRRWVKEKYTRWVKTQPCACCGMP----AD 284 + K V+ ++VD + P +M+ PK + E Y +V+ PC G Sbjct: 226 --EVLENLAKPVLKLSVDEDPPLLYMRKPKPTTYTSEAYLAFVRKLPCVVNGPGTERDPV 283 Query: 285 DPHHLIGHGQGGMGTKAHDLFVLPLCRKHHNELHTDTVAFEDKYGSQLELIFRFIDRALA 344 HHLI HG+G MG KAHDLF PL H + H D +E K+G+QL + + +AL Sbjct: 284 VAHHLILHGEGKMGGKAHDLFTFPLRASEHRKFHNDPAGWEAKHGTQLLHVKNTLRKALD 343 Query: 345 IGVLA 349 +G + Sbjct: 344 VGAIG 348 >UniRef50_C0B0V2 Putative uncharacterized protein n=2 Tax=Proteus penneri ATCC 35198 RepID=C0B0V2_9ENTR Length = 331 Score = 299 bits (764), Expect = 2e-79, Method: Composition-based stats. Identities = 85/269 (31%), Positives = 145/269 (53%), Gaps = 22/269 (8%) Query: 1 MRVLLRPVLVPELGLVVLKPGRESI-QIFHNPRVLVEPEPKSMRNLPSGVVPAVRQPLAE 59 M++LL P + +LG+V+LKP E + Q+ + RV++ PKS+ PSG + QPL Sbjct: 1 MKLLLTPYIQSDLGVVLLKPEAELLEQLKQHSRVIISDVPKSLNKWPSGALTGNEQPLLN 60 Query: 60 DKTLLPFFSNERVIRAAGGVGALSDWLLRHVTSCQWPN--GDYHHTETVIHRYGTGAMVL 117 +K ++ F +NE+VI+A GG+ +++ W+ R++ CQ + YHH E + G + Sbjct: 61 NKDIIDFLNNEKVIQAIGGLASMNMWIGRNIHCCQINDENDSYHHHELTTTWHKDGVIRT 120 Query: 118 CWHCDNQLRDQTSESLELLAQQNLTAWVIDVIRHAISGTQERELSLAELSWWAVCNQVVD 177 CW+ DN +R ++ + LA +N AW+ID IR + L++ + +AV +++VD Sbjct: 121 CWYHDNHIRHSSAGWVAELAYKNRIAWMIDTIRSRLRLDDSHSLTIPDFFAFAVMHKLVD 180 Query: 178 ALPEAVSRRSLGLPAE----KICSVYRESDIVPGELTATSILKQRTKNLAPLPYAHQQQK 233 LP+A+ RR L P + ++ + E+D VP ++ A S + R + Sbjct: 181 KLPDAILRRILNWPDKTKERRVHGGFPEADFVPNKVPALSAMNARLDAI----------- 229 Query: 234 SPQEKTVVSITVDPESPESFMKLPKRRRW 262 K ++++TVDPE P SF+ PK Sbjct: 230 ----KHLINVTVDPEPPASFLLKPKNAPL 254 >UniRef50_D2U458 Phage transcriptional regulator n=4 Tax=Enterobacteriaceae RepID=D2U458_9ENTR Length = 164 Score = 171 bits (433), Expect = 3e-41, Method: Composition-based stats. Identities = 66/146 (45%), Positives = 90/146 (61%) Query: 204 IVPGELTATSILKQRTKNLAPLPYAHQQQKSPQEKTVVSITVDPESPESFMKLPKRRRWV 263 PG + AP + + E+ V+++ +D P S MK+ K +RW Sbjct: 19 FKPGINQLHHFSGRMIVMSAPDELSDAKAGRIAEQAVLNLVIDANPPASLMKIQKLKRWG 78 Query: 264 KEKYTRWVKTQPCACCGMPADDPHHLIGHGQGGMGTKAHDLFVLPLCRKHHNELHTDTVA 323 +KY +WVK++PC C PADD HHLIG+G GG+G KAHDLF +PLCR HH+ELH D A Sbjct: 79 NQKYLQWVKSRPCCLCQKPADDAHHLIGYGYGGIGVKAHDLFSIPLCRGHHSELHHDPKA 138 Query: 324 FEDKYGSQLELIFRFIDRALAIGVLA 349 +E KYGSQL L+F F+D +L +G L+ Sbjct: 139 WEVKYGSQLALLFGFLDESLGLGALS 164 Score = 121 bits (304), Expect = 3e-26, Method: Composition-based stats. Identities = 31/138 (22%), Positives = 53/138 (38%), Gaps = 12/138 (8%) Query: 4 LLRPVLVPELGLVVLKPGRESIQIFHNPRVLVEPEPKSMRNLPSGVVP--AVRQPLAEDK 61 LL + VPELG+V KPG + F + R++V P + + +G + AV + + Sbjct: 5 LLTAIPVPELGIVAFKPGINQLHHF-SGRMIVMSAPDELSDAKAGRIAEQAVLNLVIDAN 63 Query: 62 TLLPFFSNERVIRAAGGVGALSDWL-LRHVTSCQWPNGDYHH------TETVIHRYGTGA 114 +++ R G W+ R CQ P D HH + + + Sbjct: 64 PPASLMKIQKLKRW--GNQKYLQWVKSRPCCLCQKPADDAHHLIGYGYGGIGVKAHDLFS 121 Query: 115 MVLCWHCDNQLRDQTSES 132 + LC ++L Sbjct: 122 IPLCRGHHSELHHDPKAW 139 >UniRef50_A3X1N6 Putative uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3X1N6_9BRAD Length = 384 Score = 121 bits (303), Expect = 4e-26, Method: Composition-based stats. Identities = 30/119 (25%), Positives = 47/119 (39%), Gaps = 5/119 (4%) Query: 211 ATSILKQRTKNLAPLPYAHQQQKSPQEKTVVSITVDPESPESFMKLPKRRRWVKEKYTRW 270 A L A P T + + + + + +K ++R +++ R+ Sbjct: 232 APDHLTGLEPAKATATSEDVGAVVPNSSTPLMVRANSQPVKPLLKTVRQR---SKRHLRF 288 Query: 271 VKTQPCACCGMPADDPHHLIGHGQGGMGTKAHDLFVLPLCRKHHNELHT--DTVAFEDK 327 V +QPC C D HHL + K D F +PLCR HH ELH + A+ Sbjct: 289 VASQPCLICKGSPCDAHHLKFAQARSLSMKVSDEFTVPLCRSHHQELHRHGNEAAWWAN 347 >UniRef50_Q6V7S4 Bcep22gp20 n=3 Tax=root RepID=Q6V7S4_9CAUD Length = 166 Score = 98.0 bits (242), Expect = 5e-19, Method: Composition-based stats. Identities = 28/144 (19%), Positives = 49/144 (34%), Gaps = 27/144 (18%) Query: 215 LKQRTKNLAPLPYAHQQQKSPQEKTVVSITVDPES---PESFMKLPKRRRWVKEKYTRWV 271 L + T + +A P+ + P P + + ++ V Sbjct: 12 LARGTSTMKRTTFARGSTPKPRRAGPPKVRDTPRPRIVPTALAR----------EHMGRV 61 Query: 272 KTQPCACC-----GMPADDPHHLIGHGQGGMGTKAHDLFVLPLCRKHHN------ELHTD 320 C C G + HH + G G ++ D +PLC HH LH Sbjct: 62 AELGCIVCLNMRLGRSPAEVHHARCYAGG--GQRSSDFHTIPLCPLHHRLGGAGVALHAG 119 Query: 321 TVAFEDKYGSQLELIFRFIDRALA 344 +F +G++ EL+ + + R L Sbjct: 120 RQSFARNFGTEAELLLQVL-RMLG 142 >UniRef50_A6WVD9 Putative uncharacterized protein n=1 Tax=Ochrobactrum anthropi ATCC 49188 RepID=A6WVD9_OCHA4 Length = 131 Score = 88.7 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 28/91 (30%), Positives = 39/91 (42%), Gaps = 11/91 (12%) Query: 250 PESFMKLP----KRRRWVKEKYTRWVKTQPCACCGMPADDPHHL------IGHGQGGMGT 299 P +F P KR R K+ W++T PC G + H+ G G Sbjct: 10 PTAFSTSPSKGQKRPRRENGKHLAWIRTLPCVITGQYGVEAAHIRYAAPEYGKRDTGKAE 69 Query: 300 KAHDLFVLPLCRKHHNELHT-DTVAFEDKYG 329 K D +V+PL + H E H+ + V F KYG Sbjct: 70 KPDDDWVIPLAPELHREQHSMNEVKFWAKYG 100 >UniRef50_A6UAT1 Putative uncharacterized protein n=1 Tax=Sinorhizobium medicae WSM419 RepID=A6UAT1_SINMW Length = 246 Score = 84.9 bits (208), Expect = 4e-15, Method: Composition-based stats. Identities = 23/81 (28%), Positives = 32/81 (39%), Gaps = 12/81 (14%) Query: 244 TVDPESPESFMKLPKRRRWVKEKYTRWVKTQPCACCGMPADDPHHL------IGHGQGGM 297 +V P+ PKR+ + Y ++ PC G + HL GH G Sbjct: 115 SVRPDP------TPKRKPTKNKDYLAFIHELPCCVSGRYGVEAAHLSCAAPRFGHYGRGK 168 Query: 298 GTKAHDLFVLPLCRKHHNELH 318 G+K D +VLPL H H Sbjct: 169 GSKVSDRWVLPLHPDEHRRQH 189 >UniRef50_B7I7I6 Putative uncharacterized protein n=4 Tax=Acinetobacter RepID=B7I7I6_ACIB5 Length = 91 Score = 78.7 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 24/81 (29%), Positives = 33/81 (40%), Gaps = 12/81 (14%) Query: 266 KYTRWVKTQPCACCGMPADDPHHLIG--HGQGGMGTKAHDLFVLPLCRKHHNELHTDTVA 323 K ++ PC CG P H HG+G G KA D + +PLC H Sbjct: 5 KRLAAIRKLPCVRCGYPHSQAAHSNFSEHGKGK-GIKADDKYTIPLCHSCHQ-------- 55 Query: 324 FEDKY-GSQLELIFRFIDRAL 343 + D+Y G L + D+ L Sbjct: 56 WFDQYRGMGLVESKEWFDKML 76 >UniRef50_A0KJW9 Putative uncharacterized protein n=5 Tax=Gammaproteobacteria RepID=A0KJW9_AERHH Length = 105 Score = 75.6 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 20/92 (21%), Positives = 36/92 (39%), Gaps = 12/92 (13%) Query: 260 RRWVKEKYTRWVKTQPCACCGMPADDP-----HHLIGHGQGGMGTKAHDLFVLPLCRKHH 314 + +++ V + C C P HH+ GM +A VLPLC +HH Sbjct: 3 KTKADKQWLDDVSSLGCVACRNAGLGPSLAEIHHV--RSGSGMAQRAEHTRVLPLCPRHH 60 Query: 315 NE-----LHTDTVAFEDKYGSQLELIFRFIDR 341 H +++ ++GS+ L+ + Sbjct: 61 RACYPTGFHAAPRSWQVEHGSEEALLDQVARE 92 >UniRef50_A7ILD6 Putative uncharacterized protein n=2 Tax=Xanthobacter autotrophicus Py2 RepID=A7ILD6_XANP2 Length = 163 Score = 52.1 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 32/92 (34%), Gaps = 16/92 (17%) Query: 250 PESFMKLPKRR-RWVKEKYTRWVKTQPCACCG-----MPADDPHHL------IGHGQGGM 297 P K P+ R R ++ V+ PC G ++ H+ G G Sbjct: 21 PVPSRKTPRERGRQEDAEHLDLVRDLPCLASGTLPTVRRRNEAAHIRYSSSAFGKVNPGG 80 Query: 298 GTKAHDLFVLPLCRKHHN----ELHTDTVAFE 325 G K D + +PL + H H++ + Sbjct: 81 GAKPDDRWTVPLSPEKHQGSKDAQHSNGEEWW 112 >UniRef50_C6BBU0 Putative uncharacterized protein n=1 Tax=Ralstonia pickettii 12D RepID=C6BBU0_RALP1 Length = 91 Score = 52.1 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 35/85 (41%), Gaps = 10/85 (11%) Query: 265 EKYTRWVKTQPCACC-----GMPADDPHHLIGHGQGGMGTKAHDLFVLPLCRKHHN---E 316 + Y V C C G + HH+ GM +A + +PLC +HH Sbjct: 6 KDYLGRVAAIGCVLCKRLGYGETPAEIHHV--REGQGMAQRAENWLAVPLCPEHHRGKTG 63 Query: 317 LHTDTVAFEDKYGSQLELIFRFIDR 341 +H + +A + +++L+ I+ Sbjct: 64 IHGNRMALKQVKADEVDLLAWTIEE 88 >UniRef50_Q2FUP5 Phi PV83 orf 19-like protein n=90 Tax=root RepID=Q2FUP5_STAA8 Length = 230 Score = 51.0 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 23/56 (41%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Query: 276 CACCGMPADDPHH--LIGHGQGGMGTKAHDLFVLPLCRKHHNELHT-DTVAFEDKY 328 C CG P D H +G G +D VL LCR+HHNE H +F+DKY Sbjct: 145 CVICGKPHADLAHYEAVGRGMNRNKMNHYDKHVLALCRQHHNEQHAIGVKSFDDKY 200 >UniRef50_D0IZ16 Putative uncharacterized protein n=1 Tax=Comamonas testosteroni CNB-2 RepID=D0IZ16_COMTE Length = 198 Score = 49.4 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 32/88 (36%), Gaps = 1/88 (1%) Query: 223 APLPYAHQQQKSPQEKTVVSITVDPESPESFMKLPKRRRWVKEKYTRWVKTQPCACCGMP 282 + + ++T+ P + + + +PK E Y R V PC CG+ Sbjct: 49 ERAARQIESALATASMVPENVTMTPGAGTTGIVVPKEHAIESEPYRRLVAELPCFWCGIS 108 Query: 283 ADDPHHLIGHGQGGMGTKAHDLFVLPLC 310 H + G+G K D PLC Sbjct: 109 GY-SQHAHLNYGKGLGLKTDDRTGFPLC 135 >UniRef50_A1TMU5 Putative uncharacterized protein n=1 Tax=Acidovorax citrulli AAC00-1 RepID=A1TMU5_ACIAC Length = 200 Score = 49.0 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 22/80 (27%), Positives = 27/80 (33%), Gaps = 2/80 (2%) Query: 231 QQKSPQEKTVVSITVDPESPESFMKLPKRRRWVKEKYTRWVKTQPCACCGMPADDPHHLI 290 Q + P V + + +PK E Y R V PC CG H Sbjct: 59 QARRPAFAPAV-VHALVDPQAVPTTIPKEELLRSEPYRRLVAAMPCKACGRHG-HSQHAH 116 Query: 291 GHGQGGMGTKAHDLFVLPLC 310 + GMG K D PLC Sbjct: 117 ENQGKGMGLKVDDRRGFPLC 136 >UniRef50_A7MGK3 Putative uncharacterized protein n=7 Tax=Enterobacteriaceae RepID=A7MGK3_ENTS8 Length = 98 Score = 48.6 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 30/87 (34%), Gaps = 14/87 (16%) Query: 262 WVKEKYTRWVKTQPCAC-CGMPADDPHHLIGHGQGGMGTKAHDLFVLPLCRKHHNELHTD 320 + K+ V+ C C H + GMG K D LC H+ + Sbjct: 9 YRSAKWLAAVRQLDCCVLCRRWGVQAAH--RNEDKGMGLKVDDSLTAALCVDCHHAI--- 63 Query: 321 TVAFEDKYGSQL--ELIFRFIDRALAI 345 GS+L E +DRA+ + Sbjct: 64 ------DNGSELTREERRALMDRAIVL 84 >UniRef50_Q2G3W4 Putative uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans DSM 12444 RepID=Q2G3W4_NOVAD Length = 107 Score = 48.6 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 13/62 (20%), Positives = 22/62 (35%) Query: 258 KRRRWVKEKYTRWVKTQPCACCGMPADDPHHLIGHGQGGMGTKAHDLFVLPLCRKHHNEL 317 K ++++ V PC G HH+ G+ V+PL ++H Sbjct: 4 KPPTAAEKRHMARVAEMPCLVSGRSPVTLHHVTGYADRMGRFARSHKLVVPLAPEYHLIQ 63 Query: 318 HT 319 H Sbjct: 64 HD 65 >UniRef50_A4W6Z4 Putative uncharacterized protein n=5 Tax=Proteobacteria RepID=A4W6Z4_ENT38 Length = 102 Score = 48.3 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 22/95 (23%), Positives = 37/95 (38%), Gaps = 14/95 (14%) Query: 257 PKRRRWVKEKYTRWVKTQ-PCACCGMPADDPHHLIGHGQGGMGTKAHDLFVLPLCRKHHN 315 P +R + +K+ V C CG H + GMG K D +C H+ Sbjct: 8 PGQRIYRSKKWLAAVGQIEQCVLCGSWGIQVAH--RNEGKGMGLKVDDCATAAICVCCHD 65 Query: 316 ELHTDTVAFEDKYGSQL--ELIFRFIDRALAIGVL 348 + GS+L + + +DRA+ + V+ Sbjct: 66 SIDN---------GSKLSRDERRQLMDRAIVLTVI 91 >UniRef50_Q5VJ21 Putative uncharacterized protein n=1 Tax=Aeromonas hydrophila RepID=Q5VJ21_AERHY Length = 302 Score = 47.9 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 22/48 (45%), Gaps = 5/48 (10%) Query: 303 DLFVLPLCRKHHNE-----LHTDTVAFEDKYGSQLELIFRFIDRALAI 345 VLPLC +HH H +++ ++GS+ L+ + +I Sbjct: 20 HTQVLPLCPRHHRACYPTGFHAAPRSWQVEHGSEEVLLEQVARYEKSI 67 >UniRef50_B9L925 MutS-related protein n=1 Tax=Nautilia profundicola AmH RepID=B9L925_NAUPA Length = 917 Score = 47.5 bits (111), Expect = 8e-04, Method: Composition-based stats. Identities = 27/104 (25%), Positives = 41/104 (39%), Gaps = 11/104 (10%) Query: 222 LAPLPYAHQQQKSPQEKTVVSITVDPESPESFMKLPKRRRWVKEKYTRWVKTQPCACCGM 281 A Y ++ E +T + E +K K R +V T CA CG Sbjct: 798 FAKSIYMDKEFIKLAENIRKKLTDEYSEIELLLKKKKSRYNKNL----FVTT--CAICGK 851 Query: 282 PADDPHHLIGHGQGGMG----TKAHDLF-VLPLCRKHHNELHTD 320 P +D HH+ + G H + ++PLC+KHH +H Sbjct: 852 PVEDVHHIKEKEKAKEGFIDHMPVHHKYNLIPLCKKHHKMVHEG 895 >UniRef50_B2U8H4 Putative uncharacterized protein n=1 Tax=Ralstonia pickettii 12J RepID=B2U8H4_RALPJ Length = 95 Score = 47.1 bits (110), Expect = 9e-04, Method: Composition-based stats. Identities = 25/85 (29%), Positives = 32/85 (37%), Gaps = 5/85 (5%) Query: 261 RWVKEKYTRWVKTQPCACCGMPAD-DPHHLIGHGQG-GMGTKAHDLFVLPLCRKHHNELH 318 + E R V + PC CG H G GMG KA D ++ LC H E Sbjct: 2 TYRSEPLRRAVASLPCVNCGRHGATQAAHSNLQEHGKGMGHKASDAAIMALCTVCHTEFD 61 Query: 319 TDTVAFEDKYGSQLELIFRFIDRAL 343 + + EL FR+I L Sbjct: 62 QGKGLTKAD---RRELTFRWITATL 83 >UniRef50_C6JMX6 Predicted protein n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JMX6_FUSVA Length = 165 Score = 46.7 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 24/75 (32%), Positives = 31/75 (41%), Gaps = 10/75 (13%) Query: 267 YTRWVKTQPCACCGMPADDPHHLIGHGQGGM-GTKAHDLFVLP---LCRKHHNELHT--D 320 Y V + C CG PHH H M G D LP LC HH+ELH+ + Sbjct: 67 YLCLVNKR-CCICGRKVTFPHH---HKSVSMVGGYKKDKGTLPIVALCPYHHSELHSSIN 122 Query: 321 TVAFEDKYGSQLELI 335 + K+ + LI Sbjct: 123 KFDWIAKHETYAPLI 137 >UniRef50_B4BNF1 HNH nuclease n=3 Tax=Geobacillus RepID=B4BNF1_9BACI Length = 152 Score = 46.3 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 6/87 (6%) Query: 256 LPKRRRWVKE-KYTRWVKTQPCAC--CGMPADDPHHLIGHGQGGMGTKAHDLFVLPLCRK 312 PK R + + +Y R ++ C C CG P + HH+ QGG G + + PLC Sbjct: 24 SPKTRGSISKTEYNRMIEVFGCRCMMCGDPRIEAHHVRFRSQGGRGKWRN---LAPLCHC 80 Query: 313 HHNELHTDTVAFEDKYGSQLELIFRFI 339 H +H + E + ++ ++ Sbjct: 81 CHQAVHQNRALAERLMAMREDMFGKWY 107 >UniRef50_C7XUW3 Putative uncharacterized protein n=1 Tax=Lactobacillus coleohominis 101-4-CHN RepID=C7XUW3_9LACO Length = 220 Score = 45.6 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 13/71 (18%) Query: 258 KRRRWVK-----EKYTRWVKTQPCACCGMPADDPHHLIGHGQGGMGTKAHD-----LFVL 307 K + W K +KT+ C CG P D H + GMG H+ ++ + Sbjct: 108 KLKTWEAIPNEFPKQVLAMKTRSCVICGKPNADLAH---YRAVGMGRNRHEIDERKMYFM 164 Query: 308 PLCRKHHNELH 318 LCR+HH H Sbjct: 165 SLCREHHQYQH 175 >UniRef50_UPI0001BC4568 hypothetical protein FuD12_02539 n=1 Tax=Fusobacterium sp. D12 RepID=UPI0001BC4568 Length = 243 Score = 45.6 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 8/93 (8%) Query: 241 VSITVDPESPESFMKLPKRRRWVKEKYTRW-VKTQPCACCGMPADDPHHLIGHGQGGMGT 299 +++ + P + E Y + +K + C CG + HH+ +G G Sbjct: 124 LALLKEHNIPFRSAITEMLKEQEYEHYIWFCLKYKACEVCGNVG-ELHHVD--QRGSKGY 180 Query: 300 KAHD---LFVLPLCRKHHNELHTDTVAFEDKYG 329 K D V LCRKHH+E+H D A+E KYG Sbjct: 181 KTDDGRNERVTCLCRKHHSEIHADARAYE-KYG 212 >UniRef50_Q03VL2 Putative uncharacterized protein n=1 Tax=Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 RepID=Q03VL2_LEUMM Length = 234 Score = 45.2 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 21/56 (37%), Positives = 25/56 (44%), Gaps = 3/56 (5%) Query: 276 CACCGMPADDPHHLIGHGQGGMGTKAHDL--FVLPLCRKHHNELHT-DTVAFEDKY 328 C CG D HHL GQG K + L + LCR HH E H+ F K+ Sbjct: 158 CVICGKRPSDLHHLDTIGQGVDRRKTNHLKHRAVQLCRIHHQEAHSLGIETFLQKH 213 >UniRef50_A1TN12 Putative uncharacterized protein n=3 Tax=Acidovorax RepID=A1TN12_ACIAC Length = 164 Score = 45.2 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 28/113 (24%), Positives = 35/113 (30%), Gaps = 15/113 (13%) Query: 218 RTKNLAPLPYAHQQQKSPQEKTVVSITVDPE------SPESFMKLPKRRRWVKEKYTRWV 271 R + P ++Q+ V P + +PK E Y R V Sbjct: 7 RRAARSNEPGLDREQRLADRAARAMAEVRPRASVVMPCGDLAPSVPKAAPVRSEAYRRLV 66 Query: 272 KTQPCACCGMPA-DDPHHLIGHGQGGMGTKAHDLFVLPLC------RKHHNEL 317 PC CGMP H GMG K DL PLC H+ Sbjct: 67 AALPCMACGMPGLSQCAHAN--TGKGMGLKVCDLESFPLCSDRPGTPGCHSLF 117 >UniRef50_Q03RB7 Putative uncharacterized protein n=1 Tax=Lactobacillus brevis ATCC 367 RepID=Q03RB7_LACBA Length = 233 Score = 44.4 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 2/78 (2%) Query: 271 VKTQPCACCGMPADDPH-HLIGHGQGGMGTKAHDLFVLPLCRKHHNELHT-DTVAFEDKY 328 +K C C PAD H H +G G+ +V+ LCR+HH E H +F + Sbjct: 140 IKYHRCMICNQPADIAHVHAVGIGRDRNHISHIGNYVMALCRRHHQEQHRVGIKSFMKEN 199 Query: 329 GSQLELIFRFIDRALAIG 346 + + I + L +G Sbjct: 200 QLKGVKVTPEIAKMLKLG 217 >UniRef50_A6M989 Putative uncharacterized protein n=1 Tax=Geobacillus virus E2 RepID=A6M989_9VIRU Length = 188 Score = 44.4 bits (103), Expect = 0.007, Method: Composition-based stats. Identities = 35/130 (26%), Positives = 47/130 (36%), Gaps = 20/130 (15%) Query: 210 TATSILKQRTKNLAPLPYAHQQQKSPQEKTVVSITVDPESPESFMKLPKRRRWVKEKYTR 269 A +K R L P + +K + V P R K +YTR Sbjct: 9 PAAKPVKARKDKLKPRVREKKPKKRKGKAQTYKGRVIP-------SRKVRGSVSKREYTR 61 Query: 270 WVKTQP--CACCGM-PADDPHHLIGHGQGGMGTKAHDLFVLPLCRKHHNELHTDT--VAF 324 V+ C CG + HH+ QGG G K +L PLC+ HH H D + Sbjct: 62 MVEEFGSACLVCGSTYNIEAHHVRFRSQGGRG-KWRNL--APLCKIHHQLAHQDRDFADW 118 Query: 325 -----EDKYG 329 E +YG Sbjct: 119 LRKEREVRYG 128 >UniRef50_UPI0001BCECFE hypothetical protein SnoxA4_08445 n=1 Tax=Selenomonas noxia ATCC 43541 RepID=UPI0001BCECFE Length = 219 Score = 43.3 bits (100), Expect = 0.015, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 4/56 (7%) Query: 276 CACCGMPADDPHHL--IGHGQGGMGTKAHDLFVLPLCRKHHNELHT-DTVAFEDKY 328 CA CG A + HH+ +G G+ + LPLCR+HH E+H F +Y Sbjct: 143 CAVCGRKA-ELHHVDAVGMGRNRKEICHIGMRALPLCREHHTEIHAVGREDFLRRY 197 >UniRef50_C7QFC8 HNH endonuclease n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7QFC8_CATAD Length = 391 Score = 42.5 bits (98), Expect = 0.021, Method: Composition-based stats. Identities = 31/155 (20%), Positives = 51/155 (32%), Gaps = 9/155 (5%) Query: 186 RSLGLPAEKICSVYRESDIVPGELTATSILKQRTKNLAPLPYAHQQQKSPQEKTVVSITV 245 R+ LP + A A + E + ++ V Sbjct: 194 RAGDLPQRHNGPTTMTIVMRADTAQALPGAPAARTGRGRAVPAAEAHMLRCEAALRAVLV 253 Query: 246 DPESPESFMKLPKRRRWVKEKYTRWVKTQPCA--CCGMPA--DDPHHLIGHGQGGMGTKA 301 D + + +R + V+ C C P D HH I G GG T Sbjct: 254 DGDGEILWQGRKRRLATRAQYEAMAVRDGGCTAPGCDRPPRECDAHHDIPWGAGGH-TDV 312 Query: 302 HDLFVLPLCRKHHNELHTDTVAFEDKYGSQLELIF 336 + + LCR+HH ELH + ++ ++G Q + Sbjct: 313 DQMRL--LCRRHHRELHDEL--WQRQHGWQDAEVR 343 >UniRef50_B5W3B8 HNH endonuclease n=1 Tax=Arthrospira maxima CS-328 RepID=B5W3B8_SPIMA Length = 80 Score = 41.7 bits (96), Expect = 0.035, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 28/71 (39%), Gaps = 8/71 (11%) Query: 258 KRRRWVKEKYTRWVKTQ---PCACCGMPADDPH--HLIGHGQGGMGTKAHDLFVLPLCRK 312 K+R +K + VK + C CG + H H+I + GG A ++ LC Sbjct: 7 KKRPNEHKKAQKLVKQRDGNECEICGKIGEIAHGHHVIAYSDGGP---ADLTNMMTLCPD 63 Query: 313 HHNELHTDTVA 323 H H + Sbjct: 64 CHRAYHNGEIK 74 >UniRef50_B1ZMM6 HNH endonuclease n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZMM6_OPITP Length = 279 Score = 41.7 bits (96), Expect = 0.045, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 28/71 (39%), Gaps = 9/71 (12%) Query: 255 KLPKRRRWVKEKYTRWVKTQPCACCGMPA--DDPHHLIGHGQGGMGTKAHDLF-VLPLCR 311 + PK RRWV ++ + C A D HH++G +G ++ + LC Sbjct: 194 RNPKVRRWVLKRSRGVCERLGCHITRSFAGFLDVHHILGAAKG------DRVWNCVALCP 247 Query: 312 KHHNELHTDTV 322 H E H Sbjct: 248 NCHRETHCAPN 258 >UniRef50_A3X5U3 Putative uncharacterized protein n=2 Tax=Alphaproteobacteria RepID=A3X5U3_9RHOB Length = 275 Score = 41.3 bits (95), Expect = 0.055, Method: Composition-based stats. Identities = 45/235 (19%), Positives = 73/235 (31%), Gaps = 31/235 (13%) Query: 119 WHCDNQLRDQTSESLE---------LLAQQNLTAWVIDVIRHAISGTQERELSL-AELSW 168 W D + + LA N + VI IR A + ++ ++L A + Sbjct: 37 WFDDLDQQHGPVAEIRPHGLKAHRVNLAFGNFSGAVIRQIRQASAEDRQLAMALVASIDQ 96 Query: 169 WAVCNQVVDALPE-AVSRRSLGLPAEKICSVYRESDIVPGELTATSILKQRTKNLAPLPY 227 A + AL + V+ S + A V +SD I+ + Y Sbjct: 97 AASLSISAQALDDWTVNDGSFRMAATIRHDVRPDSDEAVSHTCREVIVPMMAAMAELIGY 156 Query: 228 AHQQQKSPQEKTVVSITVDPESPESFMKLPKRRRWVKEKYTRWVKTQPCACCG-----MP 282 + ++ + P + P+ R + + CA CG Sbjct: 157 DVVEDDVICDEPAFEGAIKPSLVNRRERNPRNRLLCIR-----LHGETCAACGLEPRRRY 211 Query: 283 ADDP------HHLIGHGQGGMGTKAHDLFV--LPLCRKHHNELH-TDTVAFEDKY 328 DD HHL K +D LPLC H H V ++ +Y Sbjct: 212 GDDAGGIIEVHHLEPLANIA-APKPYDPATDLLPLCPSCHRAAHTRRPVPWDIEY 265 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P76162 Uncharacterized protein ydfU n=164 Tax=root RepI... 450 e-125 UniRef50_C4X6W4 Putative uncharacterized protein n=1 Tax=Klebsie... 420 e-116 UniRef50_B5QYR3 Phage protein n=42 Tax=root RepID=B5QYR3_SALEP 411 e-113 UniRef50_C8Q8J6 Putative uncharacterized protein n=3 Tax=root Re... 396 e-109 UniRef50_B4EVI5 Phage protein n=2 Tax=Proteus mirabilis RepID=B4... 394 e-108 UniRef50_A3MZM0 Putative uncharacterized protein n=1 Tax=Actinob... 366 e-100 UniRef50_A7JUB6 Hypothetical bacteriophage protein n=3 Tax=Paste... 361 2e-98 UniRef50_C4TVC0 Putative uncharacterized protein n=1 Tax=Yersini... 346 1e-93 UniRef50_A3EHV6 Putative uncharacterized protein n=1 Tax=Vibrio ... 345 2e-93 UniRef50_A7MYK2 Putative uncharacterized protein n=2 Tax=Vibrio ... 315 1e-84 UniRef50_Q06262 Uncharacterized 36.0 kDa protein in doc-Gp10 int... 308 2e-82 UniRef50_Q7ME22 Putative uncharacterized protein VVA0862 n=1 Tax... 302 1e-80 UniRef50_C0B0V2 Putative uncharacterized protein n=2 Tax=Proteus... 297 3e-79 UniRef50_D2U458 Phage transcriptional regulator n=4 Tax=Enteroba... 154 6e-36 UniRef50_A3X1N6 Putative uncharacterized protein n=1 Tax=Nitroba... 116 1e-24 UniRef50_Q6V7S4 Bcep22gp20 n=3 Tax=root RepID=Q6V7S4_9CAUD 95 4e-18 UniRef50_D0IZ16 Putative uncharacterized protein n=1 Tax=Comamon... 91 7e-17 UniRef50_A4W6Z4 Putative uncharacterized protein n=5 Tax=Proteob... 85 3e-15 UniRef50_A6WVD9 Putative uncharacterized protein n=1 Tax=Ochroba... 84 7e-15 UniRef50_A6UAT1 Putative uncharacterized protein n=1 Tax=Sinorhi... 84 1e-14 UniRef50_A1TMU5 Putative uncharacterized protein n=1 Tax=Acidovo... 82 2e-14 UniRef50_B4BNF1 HNH nuclease n=3 Tax=Geobacillus RepID=B4BNF1_9BACI 81 9e-14 UniRef50_B2U8H4 Putative uncharacterized protein n=1 Tax=Ralston... 79 2e-13 UniRef50_B7I7I6 Putative uncharacterized protein n=4 Tax=Acineto... 78 4e-13 UniRef50_B9L925 MutS-related protein n=1 Tax=Nautilia profundico... 78 4e-13 UniRef50_C6BBU0 Putative uncharacterized protein n=1 Tax=Ralston... 75 5e-12 UniRef50_A7MGK3 Putative uncharacterized protein n=7 Tax=Enterob... 74 6e-12 UniRef50_A0KJW9 Putative uncharacterized protein n=5 Tax=Gammapr... 74 7e-12 UniRef50_A7ILD6 Putative uncharacterized protein n=2 Tax=Xanthob... 67 1e-09 UniRef50_Q2G3W4 Putative uncharacterized protein n=1 Tax=Novosph... 66 2e-09 UniRef50_C6JMX6 Predicted protein n=1 Tax=Fusobacterium varium A... 63 1e-08 UniRef50_Q2FUP5 Phi PV83 orf 19-like protein n=90 Tax=root RepID... 59 2e-07 UniRef50_Q5VJ21 Putative uncharacterized protein n=1 Tax=Aeromon... 49 2e-04 Sequences not found previously or not previously below threshold: UniRef50_A1TN12 Putative uncharacterized protein n=3 Tax=Acidovo... 59 2e-07 UniRef50_A6M989 Putative uncharacterized protein n=1 Tax=Geobaci... 57 1e-06 UniRef50_Q30QK8 DNA mismatch repair protein MutS n=3 Tax=Epsilon... 54 5e-06 UniRef50_A6Q2C2 DNA mismatch repair ATPase MutS n=1 Tax=Nitratir... 54 9e-06 UniRef50_C5A7R6 Putative uncharacterized protein n=1 Tax=Burkhol... 53 1e-05 UniRef50_D1B043 DNA mismatch repair protein MutS domain protein ... 50 1e-04 UniRef50_C7XUW3 Putative uncharacterized protein n=1 Tax=Lactoba... 49 4e-04 UniRef50_Q94Z00 Orf757 n=4 Tax=stramenopiles RepID=Q94Z00_PYLLI 47 8e-04 UniRef50_B3XS05 Putative uncharacterized protein n=1 Tax=Lactoba... 47 0.001 UniRef50_B5W3B8 HNH endonuclease n=1 Tax=Arthrospira maxima CS-3... 47 0.001 UniRef50_Q0EWL6 Putative uncharacterized protein n=1 Tax=Maripro... 47 0.001 UniRef50_C2EXV4 Putative uncharacterized protein n=3 Tax=Lactoba... 46 0.001 UniRef50_O63852 Mitochondrial DNA mismatch repair protein mutS h... 46 0.001 UniRef50_Q03VL2 Putative uncharacterized protein n=1 Tax=Leucono... 46 0.002 UniRef50_C4WNE8 Putative uncharacterized protein n=1 Tax=Ochroba... 46 0.002 UniRef50_C4ZC63 Putative uncharacterized protein n=1 Tax=Eubacte... 46 0.002 UniRef50_Q03RB7 Putative uncharacterized protein n=1 Tax=Lactoba... 45 0.004 UniRef50_C5RA90 Putative uncharacterized protein n=1 Tax=Weissel... 45 0.004 UniRef50_Q7WKA2 Putative uncharacterized protein n=2 Tax=Bordete... 45 0.004 UniRef50_B1KZ53 Putative uncharacterized protein n=10 Tax=Clostr... 45 0.004 UniRef50_D0LCK0 HNH endonuclease n=3 Tax=Gordonia bronchialis DS... 45 0.005 UniRef50_UPI0001BCECFE hypothetical protein SnoxA4_08445 n=1 Tax... 44 0.006 UniRef50_C8P906 Putative uncharacterized protein n=1 Tax=Lactoba... 44 0.006 UniRef50_UPI0001BC4568 hypothetical protein FuD12_02539 n=1 Tax=... 44 0.007 UniRef50_D2RPV1 Restriction endonuclease-like protein n=1 Tax=Ha... 43 0.016 UniRef50_UPI0001C369A3 hypothetical protein ChatD1_02366 n=1 Tax... 42 0.021 UniRef50_C6P1I9 Putative uncharacterized protein n=1 Tax=Siderox... 42 0.021 UniRef50_O03913 Rorf242 protein n=7 Tax=root RepID=O03913_9CAUD 42 0.026 UniRef50_Q7WLR3 Putative uncharacterized protein n=1 Tax=Bordete... 42 0.032 UniRef50_C7QFC8 HNH endonuclease n=1 Tax=Catenulispora acidiphil... 42 0.032 UniRef50_C9RBS6 HNH endonuclease n=4 Tax=Ammonifex degensii KC4 ... 42 0.039 UniRef50_C7NG21 HNH endonuclease n=2 Tax=Kytococcus sedentarius ... 42 0.039 UniRef50_Q5WE26 Putative uncharacterized protein n=1 Tax=Bacillu... 41 0.061 >UniRef50_P76162 Uncharacterized protein ydfU n=164 Tax=root RepID=YDFU_ECOLI Length = 349 Score = 450 bits (1156), Expect = e-125, Method: Composition-based stats. Identities = 349/349 (100%), Positives = 349/349 (100%) Query: 1 MRVLLRPVLVPELGLVVLKPGRESIQIFHNPRVLVEPEPKSMRNLPSGVVPAVRQPLAED 60 MRVLLRPVLVPELGLVVLKPGRESIQIFHNPRVLVEPEPKSMRNLPSGVVPAVRQPLAED Sbjct: 1 MRVLLRPVLVPELGLVVLKPGRESIQIFHNPRVLVEPEPKSMRNLPSGVVPAVRQPLAED 60 Query: 61 KTLLPFFSNERVIRAAGGVGALSDWLLRHVTSCQWPNGDYHHTETVIHRYGTGAMVLCWH 120 KTLLPFFSNERVIRAAGGVGALSDWLLRHVTSCQWPNGDYHHTETVIHRYGTGAMVLCWH Sbjct: 61 KTLLPFFSNERVIRAAGGVGALSDWLLRHVTSCQWPNGDYHHTETVIHRYGTGAMVLCWH 120 Query: 121 CDNQLRDQTSESLELLAQQNLTAWVIDVIRHAISGTQERELSLAELSWWAVCNQVVDALP 180 CDNQLRDQTSESLELLAQQNLTAWVIDVIRHAISGTQERELSLAELSWWAVCNQVVDALP Sbjct: 121 CDNQLRDQTSESLELLAQQNLTAWVIDVIRHAISGTQERELSLAELSWWAVCNQVVDALP 180 Query: 181 EAVSRRSLGLPAEKICSVYRESDIVPGELTATSILKQRTKNLAPLPYAHQQQKSPQEKTV 240 EAVSRRSLGLPAEKICSVYRESDIVPGELTATSILKQRTKNLAPLPYAHQQQKSPQEKTV Sbjct: 181 EAVSRRSLGLPAEKICSVYRESDIVPGELTATSILKQRTKNLAPLPYAHQQQKSPQEKTV 240 Query: 241 VSITVDPESPESFMKLPKRRRWVKEKYTRWVKTQPCACCGMPADDPHHLIGHGQGGMGTK 300 VSITVDPESPESFMKLPKRRRWVKEKYTRWVKTQPCACCGMPADDPHHLIGHGQGGMGTK Sbjct: 241 VSITVDPESPESFMKLPKRRRWVKEKYTRWVKTQPCACCGMPADDPHHLIGHGQGGMGTK 300 Query: 301 AHDLFVLPLCRKHHNELHTDTVAFEDKYGSQLELIFRFIDRALAIGVLA 349 AHDLFVLPLCRKHHNELHTDTVAFEDKYGSQLELIFRFIDRALAIGVLA Sbjct: 301 AHDLFVLPLCRKHHNELHTDTVAFEDKYGSQLELIFRFIDRALAIGVLA 349 >UniRef50_C4X6W4 Putative uncharacterized protein n=1 Tax=Klebsiella pneumoniae NTUH-K2044 RepID=C4X6W4_KLEPN Length = 354 Score = 420 bits (1080), Expect = e-116, Method: Composition-based stats. Identities = 178/350 (50%), Positives = 243/350 (69%), Gaps = 3/350 (0%) Query: 1 MRVLLRPVLVPELGLVVLKPGRESIQIFHNPRVLVEPEPKSMRNLPSGVVPAVRQPLAED 60 +R LL P +VP LG+V+ KPG+E + +F RVL+ P+P+ M P+G VP RQPL+ D Sbjct: 3 LRGLLTPEIVPRLGVVLFKPGKELMSLFAQGRVLITPQPEYMAGFPTGKVPDARQPLSVD 62 Query: 61 KTLLPFFSNERVIRAAGGVGALSDWLLRHVTSCQWPNGDYHHTETVIHRYGTGAMVLCWH 120 ++L+PFF++ RVI AAGG+ L WL V CQ + YHH ETVI R G+++LCWH Sbjct: 63 RSLVPFFTDPRVITAAGGIEGLERWLSLSVRQCQNHDEGYHHIETVILRQDPGSVLLCWH 122 Query: 121 CDNQLRDQTSESLELLAQQNLTAWVIDVIRHAISGTQERELSLAELSWWAVCNQVVDALP 180 CDN+LRD+ +++ +A +N+ WVID++ ++ T+ER LSLAEL WWAV + + DA+ Sbjct: 123 CDNKLRDEPDPAIKEIASRNVIDWVIDMVLLSLGCTRERTLSLAELCWWAVQSGISDAIT 182 Query: 181 EAVSRRSLGLPAEKICSVYRESDIVPGELTATSILKQRTKNLAPLPYAHQQQKSPQEK-- 238 EA++ ++L + E SVYR+SDI+P + A ILK+R Q+ Sbjct: 183 EAMAEKALRIAPEPHRSVYRDSDIIPA-IPAADILKRRLDKRESHAITGGLVTGDQDAGR 241 Query: 239 TVVSITVDPESPESFMKLPKRRRWVKEKYTRWVKTQPCACCGMPADDPHHLIGHGQGGMG 298 ++ + VDP+ PE+FM PKRRRW+ +YT+WVKTQ CACC PADDPHH+IGHG GG Sbjct: 242 PILRLGVDPDCPEAFMLRPKRRRWICPQYTQWVKTQECACCRQPADDPHHIIGHGMGGTA 301 Query: 299 TKAHDLFVLPLCRKHHNELHTDTVAFEDKYGSQLELIFRFIDRALAIGVL 348 TKAHDLFV+PLCR HH+ELH + +AFE+KYGSQLEL+ RF+DRAL IGV+ Sbjct: 302 TKAHDLFVIPLCRAHHDELHANLIAFEEKYGSQLELLIRFLDRALGIGVI 351 >UniRef50_B5QYR3 Phage protein n=42 Tax=root RepID=B5QYR3_SALEP Length = 329 Score = 411 bits (1056), Expect = e-113, Method: Composition-based stats. Identities = 188/349 (53%), Positives = 236/349 (67%), Gaps = 20/349 (5%) Query: 1 MRVLLRPVLVPELGLVVLKPGRESIQIFHNPRVLVEPEPKSMRNLPSGVVPAVRQPLAED 60 MR LL P + P +G+V+ +PG E + +F RVL+EPEP+ + G VPAV QPLA+D Sbjct: 1 MRALLTPEIAPRMGVVLFRPGSELMPLFMQGRVLLEPEPEQYSSFACGAVPAVSQPLADD 60 Query: 61 KTLLPFFSNERVIRAAGGVGALSDWLLRHVTSCQWPNGDYHHTETVIHRYGTGAMVLCWH 120 + F NE VI AGG+ +L WLLR CQWP+ +H + R+ GA+ LCWH Sbjct: 61 PAVRDVFRNESVIYRAGGLDSLESWLLRG-NGCQWPHSVWHSEQMTTMRHAPGAIRLCWH 119 Query: 121 CDNQLRDQTSESLELLAQQNLTAWVIDVIRHAISGTQERELSLAELSWWAVCNQVVDALP 180 CDN LR+Q +E LE +A +N T WV+ V+ + ++L EL WW V N + + LP Sbjct: 120 CDNLLREQFTERLESIAVENTTKWVLSVVCRDLGFDDMHAVTLPELCWWMVRNDLAEVLP 179 Query: 181 EAVSRRSLGLPAEKICSVYRESDIVPGELTATSILKQRTKNLAPLPYAHQQQKSPQEKTV 240 E+ +R++L +P + S RES+IVP + ATSI++ + K V Sbjct: 180 ESAARKALRMPKAIVQSATRESEIVPS-VPATSIVQDK------------------AKKV 220 Query: 241 VSITVDPESPESFMKLPKRRRWVKEKYTRWVKTQPCACCGMPADDPHHLIGHGQGGMGTK 300 +++ VDPESPESFM PKRRRW+ E+YTRWVK+QPCACCG ADDPHHL GHGQGGMGTK Sbjct: 221 LALRVDPESPESFMLRPKRRRWINERYTRWVKSQPCACCGKQADDPHHLTGHGQGGMGTK 280 Query: 301 AHDLFVLPLCRKHHNELHTDTVAFEDKYGSQLELIFRFIDRALAIGVLA 349 AHDLFVLPLCR HHNELH DTVAFE+KYGSQLELIFRFIDRALAIGVLA Sbjct: 281 AHDLFVLPLCRTHHNELHADTVAFEEKYGSQLELIFRFIDRALAIGVLA 329 >UniRef50_C8Q8J6 Putative uncharacterized protein n=3 Tax=root RepID=C8Q8J6_9ENTR Length = 338 Score = 396 bits (1016), Expect = e-109, Method: Composition-based stats. Identities = 164/352 (46%), Positives = 216/352 (61%), Gaps = 21/352 (5%) Query: 1 MRVLLRPVLVPELGLVVLKPGRESIQIFHNPRVLVEPEPKSMRNLPSGVVPAVRQPLAED 60 MR LL P LVP +G+V+ KPG++ +F RVL+ M +LPSG++ QPL ++ Sbjct: 1 MRALLTPELVPRIGVVLFKPGKDLHSLFR-GRVLISTPTSEMADLPSGLINDSSQPLLDE 59 Query: 61 KTLLPFFSNERVIRAAGGVGALSDWLLRHVTSCQW-PNGDYHHTETVIHRYGTGAMVLCW 119 K+L FF + RVIRAAGG A W+ + + +CQ YHH R +G + LC+ Sbjct: 60 KSLAVFFQDGRVIRAAGGWEAHDAWVQK-INACQLQKKDSYHHPHYTTLRTESGTVCLCY 118 Query: 120 HCDNQLR-DQTSESLELLAQQNLTAWVIDVIRHAISGTQERELSLAELSWWAVCNQVVDA 178 H DN R + LE +A N+ W+I+ + + ++L EL WWA N V D Sbjct: 119 HDDNSARLNGLPAQLEEVATGNMARWIIESACVHMGLGSDHRMTLPELCWWACLNDVTDL 178 Query: 179 LPEAVSRRSLGLPAEKIC-SVYRESDIVPGELTATSILKQRTKNLAPLPYAHQQQKSPQE 237 +PEA +RR L +PAEK +ES I P Q+ + Sbjct: 179 IPEAPARRVLRMPAEKPATGELKESRIQP----------------ERAAREVIQEAAEVV 222 Query: 238 KTVVSITVDPESPESFMKLPKRRRWVKEKYTRWVKTQPCACCGMPADDPHHLIGHGQGGM 297 K V+++ +DPESPESFMK PKRRR EKYTRWVK QPCACC PADDPHH+IG+GQGGM Sbjct: 223 KAVINLAIDPESPESFMKRPKRRRLENEKYTRWVKAQPCACCNKPADDPHHIIGYGQGGM 282 Query: 298 GTKAHDLFVLPLCRKHHNELHTDTVAFEDKYGSQLELIFRFIDRALAIGVLA 349 GTKAHDLFV+PLCR HH+ELH D VAFE+KYGSQ+EL+FRF+D ++A+GV+ Sbjct: 283 GTKAHDLFVIPLCRAHHDELHRDPVAFENKYGSQIELLFRFLDHSIAVGVIG 334 >UniRef50_B4EVI5 Phage protein n=2 Tax=Proteus mirabilis RepID=B4EVI5_PROMH Length = 341 Score = 394 bits (1012), Expect = e-108, Method: Composition-based stats. Identities = 142/355 (40%), Positives = 219/355 (61%), Gaps = 22/355 (6%) Query: 1 MRVLLRPVLVPELGLVVLKPGRESIQIFH-NPRVLVEPEPKSMRNLPSGVVPAVRQPLAE 59 M++LL P + +LG+V+LKPG E ++ F + RV++ PKS+ PSG + QPL + Sbjct: 1 MKLLLTPYIQSDLGVVLLKPGAELLKQFKPHSRVIISDVPKSLDKWPSGALTGNEQPLLD 60 Query: 60 DKTLLPFFSNERVIRAAGGVGALSDWLLRHVTSCQWPN--GDYHHTETVIHRYGTGAMVL 117 +K ++ F +N++V++A GG+ +++ W+ R++ CQ + YHH E + G + Sbjct: 61 NKGIVDFLNNKKVLQAMGGLSSMNMWIGRNIHCCQINDKHDSYHHHELTTTWHKDGVIRT 120 Query: 118 CWHCDNQLRDQTSESLELLAQQNLTAWVIDVIRHAISGTQERELSLAELSWWAVCNQVVD 177 CW+ DN +R ++E + LA +N AW++D IR + L++ + +AV +++VD Sbjct: 121 CWYHDNHIRHSSAEWVAELAHKNRIAWMVDTIRSRLRLDDSHSLTIPDFFAFAVMHKLVD 180 Query: 178 ALPEAVSRRSLGLPAE----KICSVYRESDIVPGELTATSILKQRTKNLAPLPYAHQQQK 233 LP+A+ RR L P + ++ + E+DIVP E+TA S + R + Sbjct: 181 KLPDAILRRILNWPDKTKDRRVHGGFPEADIVPNEVTALSAMNARLDAI----------- 229 Query: 234 SPQEKTVVSITVDPESPESFMKLPKRRRWVKEKYTRWVKTQPCACCGMPADDPHHLIGHG 293 K V+++TVDPE P SF+ PK RW ++ +WVKTQPC CG ADDPHH+IGHG Sbjct: 230 ----KPVINVTVDPEPPASFLLKPKMCRWENTQWLQWVKTQPCCVCGQQADDPHHIIGHG 285 Query: 294 QGGMGTKAHDLFVLPLCRKHHNELHTDTVAFEDKYGSQLELIFRFIDRALAIGVL 348 GGMGTKAHDLF +PLCR+HH+ELH D +E YG+Q+EL+F F++R+L +G L Sbjct: 286 MGGMGTKAHDLFTIPLCRQHHDELHHDPKLWEATYGNQIELLFSFLNRSLGMGAL 340 >UniRef50_A3MZM0 Putative uncharacterized protein n=1 Tax=Actinobacillus pleuropneumoniae L20 RepID=A3MZM0_ACTP2 Length = 340 Score = 366 bits (939), Expect = e-100, Method: Composition-based stats. Identities = 123/351 (35%), Positives = 179/351 (50%), Gaps = 23/351 (6%) Query: 3 VLLRPVLVPELGLVVLKPGRESIQIFHNPRVLVEPEPKSMRNLPSGVVPAVR--QPLAED 60 +LL+P E G+V + ++ R ++ P S++ PSG + + Q Sbjct: 5 LLLKPYFQTEAGIVFYRIPPTVNKLAFGERTILMPATDSLKTQPSGKIGVAKNLQNSTAC 64 Query: 61 KTLLPFFSNERVIRAAGGVGALSDWLLRHVTSCQWPNGDYHHTETVIHRYGTGAMVLCWH 120 L F +E V +AAGG LS W+ R + CQ +G Y H E + R TG + CWH Sbjct: 65 PQLADFTKSELVRKAAGGEAELSKWV-RKIAICQCRDGAYCHKEMTVTRTATGFIRTCWH 123 Query: 121 CDN--QLRDQTSESLELLAQQNLTAWVIDVIRHAISGTQERELSLAELSWWAVCNQVVDA 178 D + + E L LA+ N ++ IR + + L+L L WA+ V A Sbjct: 124 HDGIAHRGEASEEELNALAEANWVQFIGYKIRQDLQMQADESLNLGCLLAWAIAKNCVSA 183 Query: 179 LPEAVSRRSLGLPAEKICSVYRESDIVPGELTATSILKQRTKNLAPLPYAHQQQKSPQEK 238 + E+ RR L LP +++ +RES E + + Sbjct: 184 IDESDLRRLLNLPQKEVPD-HRESTTYAAEQADPHKIF-----------------KTLAQ 225 Query: 239 TVVSITVDPESPESFMKLPKRRRWVKEKYTRWVKTQPCACCGMPADDPHHLIGHGQGGMG 298 ++ + DPE P SFM PK +R+ K+ ++VK+QPC CCG ADDPHH+IG G+G MG Sbjct: 226 PILKLKADPEPPASFMAKPKEKRFESSKWLQFVKSQPCVCCGKRADDPHHIIGQGRGKMG 285 Query: 299 TKAHDLFVLPLCRKHHNELHTDTVAFEDKYGSQLELIFRFIDRALAIGVLA 349 +K HDLFV+PLCR HHNELH + FE YG Q +L+FRF+DRAL++ L+ Sbjct: 286 SKEHDLFVIPLCRVHHNELHCNAQLFEQNYGKQTDLLFRFLDRALSLEALS 336 >UniRef50_A7JUB6 Hypothetical bacteriophage protein n=3 Tax=Pasteurellaceae RepID=A7JUB6_PASHA Length = 342 Score = 361 bits (926), Expect = 2e-98, Method: Composition-based stats. Identities = 119/353 (33%), Positives = 171/353 (48%), Gaps = 26/353 (7%) Query: 3 VLLRPVLVPELGLVVLKPGRESIQIFHNPRVLVEPEPKSMRNLPSGVVPAVRQPLAEDKT 62 +LL P E+G+V K ++ R L++P P + + SG V K Sbjct: 5 LLLTPYFQTEVGIVFYKVPKDVSPAAFGERTLLQPAPTDLATVKSGKVANFSANSTACKE 64 Query: 63 LLPFFSNERVIRAAGGVGALSDWL-----LRHVTSCQWPNGDYHHTETVIHRYGTGAMVL 117 L F + +V A S+ L ++ + Q +G Y H E V GA+ L Sbjct: 65 LAEFAKSAKVRSALNQRDKYSNDLPYTRFVKSIQKYQCRDGKYCHPEKVFVENEKGAVQL 124 Query: 118 CWHCDNQLRDQ--TSESLELLAQQNLTAWVIDVIRHAISGTQERELSLAELSWWAVCNQV 175 CW+ D D +E LE LA +N ++ IR + TQ + A+L +A + Sbjct: 125 CWYHDKMRMDGEIPNEKLEALADENWEKFIAQQIRLTLRKTQSSAIEFADLVLFASIKGL 184 Query: 176 VDALPEAVSRRSLGLPAEKICSVYRESDIVPGELTATSILKQRTKNLAPLPYAHQQQKSP 235 +D L ++ LG P V +ES+I +P A K Sbjct: 185 LDELDSNALQQFLGYPPLNNSGVSKESNI----------------GFDDVPNARANLKKW 228 Query: 236 QEKTVVSITVDPESPESFMKLPKRRRWVKEKYTRWVKTQPCACCGMPADDPHHLIGHGQG 295 E + + V+PE +FM PK +R+ K+ ++VK QPC CCG ADDPHH+IG+G G Sbjct: 229 AE--TLKLKVEPEPLAAFMAKPKLQRFEWRKWLQFVKAQPCMCCGQQADDPHHIIGYG-G 285 Query: 296 GMGTKAHDLFVLPLCRKHHNELHTDTVAFEDKYGSQLELIFRFIDRALAIGVL 348 MG+K HDLF LPLCR HH+ELH + FE YGSQLEL+ +F+DRA+ +G L Sbjct: 286 AMGSKQHDLFTLPLCRIHHDELHRNVGKFEQDYGSQLELLIKFLDRAIGLGAL 338 >UniRef50_C4TVC0 Putative uncharacterized protein n=1 Tax=Yersinia kristensenii ATCC 33638 RepID=C4TVC0_YERKR Length = 321 Score = 346 bits (886), Expect = 1e-93, Method: Composition-based stats. Identities = 144/339 (42%), Positives = 198/339 (58%), Gaps = 22/339 (6%) Query: 15 LVVLKPGRESIQIFHNPRVLVEPEPKSMRNLPSGVVPAVRQPLAEDKTLLPFFSNERVIR 74 +V+LKPG + + + + R+LV EP+ ++LPSG +P Q LA D LLPFF +ERVI Sbjct: 1 MVILKPGVDLLP-YMSGRLLVATEPEEFKSLPSGALPVAIQQLANDPRLLPFFEHERVIN 59 Query: 75 AAGGVGALSDWLLRHVTSCQWPNGDYHH-TETVIHRYGTGAMVLCWHCDNQLRDQTSESL 133 AAGG L+ W+ + + CQW + D H YG ++ LCWH DN+LR+ T L Sbjct: 60 AAGGHRLLATWV-KQLKECQWHDPDDTHVQNLTTLSYGQRSIRLCWHHDNKLREHTLPRL 118 Query: 134 ELLAQQNLTAWVIDVIRHAISGTQERELSLAELSWWAVCNQVVDALPEAVSRRSLGL-PA 192 E LA NL +W+I I + +L++ EL WWAV N+V D LP++++R SL + PA Sbjct: 119 EQLATSNLISWIISTICSHFRLPEGHQLTMPELCWWAVVNEVSDQLPDSIARASLRMLPA 178 Query: 193 EKICSVYRESDIVPGELTATSILKQRTKNLAPLPYAHQQQKSPQEKTVVSITVDPESPES 252 RESDI P P + K Q K V+++ +D E P S Sbjct: 179 VMKSGPTRESDI----------------TWTPNPTQIIENKVEQVKKVLALKIDDEPPAS 222 Query: 253 FMKLPKRRRWVKEKYTRWVKTQPCACCGMPADDP--HHLIGHGQGGMGTKAHDLFVLPLC 310 FM++PKR RW K+ +WVK+Q C CG ADDP G GQGGMGTKAHDLF +PLC Sbjct: 223 FMRIPKRYRWESAKWLKWVKSQQCCGCGSSADDPHHIIGHGQGQGGMGTKAHDLFTIPLC 282 Query: 311 RKHHNELHTDTVAFEDKYGSQLELIFRFIDRALAIGVLA 349 R H+ LH D +E ++GSQ+ L F F+DR+++IG +A Sbjct: 283 RLCHDALHADMHTWEAEHGSQVVLWFHFMDRSISIGAMA 321 >UniRef50_A3EHV6 Putative uncharacterized protein n=1 Tax=Vibrio cholerae V51 RepID=A3EHV6_VIBCH Length = 342 Score = 345 bits (884), Expect = 2e-93, Method: Composition-based stats. Identities = 110/364 (30%), Positives = 173/364 (47%), Gaps = 40/364 (10%) Query: 3 VLLRPVLVPELGLVVLKPGRESI----QIFHNPRVLVEPEPKSMRNLPSGVVPAVRQPLA 58 ++L+P L P+LG+V+ KPG+ + ++ R+++ P P + +PSG + + Sbjct: 2 LVLQPFLQPDLGIVMFKPGKTLLTELVKMSQGNRLVLMPLPDELVTVPSGKLNKPILSSS 61 Query: 59 E------------DKTLLPFFSNERVIRAAGGVGALSDWLLRHVTSCQWPNGDYHHTETV 106 + D L+ FF +E V R G L W+ + CQ +G+Y Sbjct: 62 DNQEDHLLDGCLLDGCLIDFFLDEEVQRRLSG---LKHWV-ELIPHCQLSDGEYCDKNLT 117 Query: 107 IHRYGTGAMVLCWHCDNQLRDQTSESLELLAQQNLTAWVIDVIRHAISGTQERELSLAEL 166 G + CWH DNQ R + S + +A++N+ W + I + R+ SL EL Sbjct: 118 TLSTDKGMVKCCWHHDNQERREPSIHAKQVAEKNVILWAEERISANLKL--NRKPSLHEL 175 Query: 167 SWWAVCNQVVDALPEAVSRRSLGLPAEKICSVYRESDIVPGELTATSILKQRTKNLAPLP 226 WW V N + + LP+ + ++LG+ E+ Y + R L Sbjct: 176 CWWTVLNGLYEKLPQVIVEKALGIRQEQKADQYM-------------VKMDRDDRL---- 218 Query: 227 YAHQQQKSPQEKTVVSITVDPESPESFMKLPKRRRWVKEKYTRWVKTQPCACCGMPAD-D 285 + QQ + + +TVD E P FM PK + W EKY ++V++ PC G D Sbjct: 219 FFDAQQSLNSRVSAIELTVDDEPPAMFMARPKEKTWHSEKYLKFVRSLPCVITGKTTDVV 278 Query: 286 PHHLIGHGQGGMGTKAHDLFVLPLCRKHHNELHTDTVAFEDKYGSQLELIFRFIDRALAI 345 HHLIGHG+G M K+HDLF +P+ H + H D A+E K+GSQL + + I +AL + Sbjct: 279 AHHLIGHGEGKMAGKSHDLFTIPIHTDEHRKFHDDPKAWEAKHGSQLFYVKQTIKKALDL 338 Query: 346 GVLA 349 G L Sbjct: 339 GALT 342 >UniRef50_A7MYK2 Putative uncharacterized protein n=2 Tax=Vibrio harveyi group RepID=A7MYK2_VIBHB Length = 323 Score = 315 bits (807), Expect = 1e-84, Method: Composition-based stats. Identities = 99/345 (28%), Positives = 158/345 (45%), Gaps = 33/345 (9%) Query: 9 LVPEL--GLVVLKPGRESI-QIFHNPRV-LVEPEPKSMRNLPSGVVPAVRQPLAEDKTLL 64 +VP L ++ L P +S+ + + ++ LV P + G+ ++D +L+ Sbjct: 8 IVPTLNAAVIALTPNTQSLTSLLVDGKIGLVSPNQRLATKTAGGL-------SSDDSSLV 60 Query: 65 PFFSNERVIRAAGGVGALSDWLLRHVTSCQWPNGDYHHTETVIHRYGTGAMVLCWHCDNQ 124 FF++E V G D ++ CQ + Y + G GA+ LCWH DN Sbjct: 61 AFFAHENVQLLIGSTVKYVD----TISECQLKDEGYCNHNLKTRVTGEGAIRLCWHHDNM 116 Query: 125 LRDQTSESLELLAQQNLTAWVIDVIRHAISGTQERELSLAELSWWAVCNQVVDALPEAVS 184 D S +A++N + V+ + ++ R ++ +L WWAV N V + LP++V Sbjct: 117 ADD--SHQAYSIARKNTVRHGLMVVSRQLH-SEVRRITGVDLCWWAVRNDVYELLPQSVI 173 Query: 185 RRSLGLPAEKICSVYRESDIVPGELTATSILKQRTKNLAPLPYAHQQQKSPQEKTVVSIT 244 R A + T + Q + K V+ + Sbjct: 174 ERQFKREATVKRVGVK--------------GNIDTDARYMVESQRAQLERLA-KPVLKLV 218 Query: 245 VDPESPESFMKLPKRRRWVKEKYTRWVKTQPCACCGMPADDPHHLIGHGQGGMGTKAHDL 304 +D + P +++ PK RW EKY +V+ PC CG A HHLIGHG+G MG+KA D+ Sbjct: 219 IDDDPPAMYLRKPKPIRWESEKYLSFVRKLPCRVCGKTAGIAHHLIGHGEGKMGSKASDM 278 Query: 305 FVLPLCRKHHNELHTDTVAFEDKYGSQLELIFRFIDRALAIGVLA 349 F PLC +HH ELH D +E ++G QL + I+RAL +G + Sbjct: 279 FTFPLCNEHHQELHRDMNTWERQHGDQLWHVKETINRALVVGAVG 323 >UniRef50_Q06262 Uncharacterized 36.0 kDa protein in doc-Gp10 intergenic region n=4 Tax=root RepID=YORA_BPP1 Length = 312 Score = 308 bits (788), Expect = 2e-82, Method: Composition-based stats. Identities = 84/321 (26%), Positives = 148/321 (46%), Gaps = 22/321 (6%) Query: 35 VEPEPKSM-RNLPSGVVPAVRQPLAEDKTLLPFFSNERVIRAAGGVGALSDWLLRHVTSC 93 +EP P+ + ++ G+V Q +A ++ L PFF+++ + R GG+ AL WL R C Sbjct: 1 MEPVPRELIEHMEDGLV-VTEQTMATNEALQPFFNSDELFRRIGGIDALVAWLRRKEGQC 59 Query: 94 QWPNGDYHHTETVIHRYGTGAMVLCWHCDNQLRDQTSESLELLAQQNLTAWVIDVIRHAI 153 Q + + V A++LCWH DN R + L+ N W++DV R + Sbjct: 60 QAADRSWCDNHIVHAERDNSAVLLCWHHDNHYRMRGFNELKETLHNNRVNWILDVARQEM 119 Query: 154 SGTQERELSLAELSWWAVCNQVVDALPEAVSRRSLG--LPAEKICSVYRESDIVPGELTA 211 + +LS+ EL WWA ++ +PE V R S+ + +E+DI P + A Sbjct: 120 GLSNSHDLSIQELCWWAFMRNMMHLMPEEVCRISINKMKATPQDSGPLKEADIRPYDDRA 179 Query: 212 TSILKQRTKNLAPLPYAHQQQKSPQEKTVVSITVDPESPESFMKLPKRRRWVKEKYTRWV 271 T+ ++ +++ +P V + VD + + K+PK + +Y +V Sbjct: 180 TAYVQMM-----------EERSAPMRAKVCPVDVDSDPGMAHFKIPKLQSLKLPEYMDFV 228 Query: 272 KTQPCACCGMPADDPH---HLIGHGQGGMGTKAHDLFVLPLCRKHHNELHTDTVAFEDKY 328 ++PC CG H +++ H + AHD++ +PLC+ ++ D +E + Sbjct: 229 ASRPCCGCGAAGRGAHITPYIVRHSR----LCAHDIYAIPLCQSCQRDIERDRYNWEKTH 284 Query: 329 GSQLELIFRFIDRALAIGVLA 349 G F D AL +GV+ Sbjct: 285 GRLAMHQRLFFDYALGVGVIT 305 >UniRef50_Q7ME22 Putative uncharacterized protein VVA0862 n=1 Tax=Vibrio vulnificus YJ016 RepID=Q7ME22_VIBVY Length = 348 Score = 302 bits (773), Expect = 1e-80, Method: Composition-based stats. Identities = 96/365 (26%), Positives = 156/365 (42%), Gaps = 55/365 (15%) Query: 8 VLVPELGLVVLKPG-RESIQIFHNPRVLVEPEPKSMRNLPSG--------VVPAVRQPLA 58 + +P+LG+ +L G S+ + R L++P P S+ + G ++ + ++ + Sbjct: 16 IPIPQLGITLLNTGDHTSLMQDLDGRALIQPVPLSLIHRSDGPVVVDAVTLIASEKETVR 75 Query: 59 EDKTLLPFFSNERVIRAAGGVGALSDWLLRHVTSCQWPNGDYHHTETVIHRYGTGAMVLC 118 D +LLPFF++ V + + D + CQ + +H + GA+ LC Sbjct: 76 RDLSLLPFFAHPDVDKLFDPIEKHVD----RIPRCQAKSEHCNHNLLTVKLENGGAIRLC 131 Query: 119 WHCDNQLRDQTSESLELLAQQNLTAWVIDVIRHAISGTQERELSLAELSWWAVCNQVVDA 178 WH D L + ++ A NL + +V+ + G+ L++ EL WWAV N+V A Sbjct: 132 WHHD--LHREEVVGIDSKAATNLIVFRSNVVSVRLHGS-VLPLTMPELCWWAVRNKVYHA 188 Query: 179 LP----------EAVSRRSLGLPAEKICSVYRESDIVPGELTATSILKQRTKNLAPLPYA 228 LP E RR G + Y + D Sbjct: 189 LPHDLLSKIFEEEKTRRRVGGRGYIDTNARYIQQDSR----------------------- 225 Query: 229 HQQQKSPQEKTVVSITVDPESPESFMKLPKRRRWVKEKYTRWVKTQPCACCG----MPAD 284 + K V+ ++VD + P +M+ PK + E Y +V+ PC G Sbjct: 226 --EVLENLAKPVLKLSVDEDPPLLYMRKPKPTTYTSEAYLAFVRKLPCVVNGPGTERDPV 283 Query: 285 DPHHLIGHGQGGMGTKAHDLFVLPLCRKHHNELHTDTVAFEDKYGSQLELIFRFIDRALA 344 HHLI HG+G MG KAHDLF PL H + H D +E K+G+QL + + +AL Sbjct: 284 VAHHLILHGEGKMGGKAHDLFTFPLRASEHRKFHNDPAGWEAKHGTQLLHVKNTLRKALD 343 Query: 345 IGVLA 349 +G + Sbjct: 344 VGAIG 348 >UniRef50_C0B0V2 Putative uncharacterized protein n=2 Tax=Proteus penneri ATCC 35198 RepID=C0B0V2_9ENTR Length = 331 Score = 297 bits (761), Expect = 3e-79, Method: Composition-based stats. Identities = 85/268 (31%), Positives = 145/268 (54%), Gaps = 22/268 (8%) Query: 1 MRVLLRPVLVPELGLVVLKPGRESI-QIFHNPRVLVEPEPKSMRNLPSGVVPAVRQPLAE 59 M++LL P + +LG+V+LKP E + Q+ + RV++ PKS+ PSG + QPL Sbjct: 1 MKLLLTPYIQSDLGVVLLKPEAELLEQLKQHSRVIISDVPKSLNKWPSGALTGNEQPLLN 60 Query: 60 DKTLLPFFSNERVIRAAGGVGALSDWLLRHVTSCQWPN--GDYHHTETVIHRYGTGAMVL 117 +K ++ F +NE+VI+A GG+ +++ W+ R++ CQ + YHH E + G + Sbjct: 61 NKDIIDFLNNEKVIQAIGGLASMNMWIGRNIHCCQINDENDSYHHHELTTTWHKDGVIRT 120 Query: 118 CWHCDNQLRDQTSESLELLAQQNLTAWVIDVIRHAISGTQERELSLAELSWWAVCNQVVD 177 CW+ DN +R ++ + LA +N AW+ID IR + L++ + +AV +++VD Sbjct: 121 CWYHDNHIRHSSAGWVAELAYKNRIAWMIDTIRSRLRLDDSHSLTIPDFFAFAVMHKLVD 180 Query: 178 ALPEAVSRRSLGLPAE----KICSVYRESDIVPGELTATSILKQRTKNLAPLPYAHQQQK 233 LP+A+ RR L P + ++ + E+D VP ++ A S + R + Sbjct: 181 KLPDAILRRILNWPDKTKERRVHGGFPEADFVPNKVPALSAMNARLDAI----------- 229 Query: 234 SPQEKTVVSITVDPESPESFMKLPKRRR 261 K ++++TVDPE P SF+ PK Sbjct: 230 ----KHLINVTVDPEPPASFLLKPKNAP 253 >UniRef50_D2U458 Phage transcriptional regulator n=4 Tax=Enterobacteriaceae RepID=D2U458_9ENTR Length = 164 Score = 154 bits (388), Expect = 6e-36, Method: Composition-based stats. Identities = 66/146 (45%), Positives = 90/146 (61%) Query: 204 IVPGELTATSILKQRTKNLAPLPYAHQQQKSPQEKTVVSITVDPESPESFMKLPKRRRWV 263 PG + AP + + E+ V+++ +D P S MK+ K +RW Sbjct: 19 FKPGINQLHHFSGRMIVMSAPDELSDAKAGRIAEQAVLNLVIDANPPASLMKIQKLKRWG 78 Query: 264 KEKYTRWVKTQPCACCGMPADDPHHLIGHGQGGMGTKAHDLFVLPLCRKHHNELHTDTVA 323 +KY +WVK++PC C PADD HHLIG+G GG+G KAHDLF +PLCR HH+ELH D A Sbjct: 79 NQKYLQWVKSRPCCLCQKPADDAHHLIGYGYGGIGVKAHDLFSIPLCRGHHSELHHDPKA 138 Query: 324 FEDKYGSQLELIFRFIDRALAIGVLA 349 +E KYGSQL L+F F+D +L +G L+ Sbjct: 139 WEVKYGSQLALLFGFLDESLGLGALS 164 Score = 121 bits (303), Expect = 4e-26, Method: Composition-based stats. Identities = 31/138 (22%), Positives = 53/138 (38%), Gaps = 12/138 (8%) Query: 4 LLRPVLVPELGLVVLKPGRESIQIFHNPRVLVEPEPKSMRNLPSGVVP--AVRQPLAEDK 61 LL + VPELG+V KPG + F + R++V P + + +G + AV + + Sbjct: 5 LLTAIPVPELGIVAFKPGINQLHHF-SGRMIVMSAPDELSDAKAGRIAEQAVLNLVIDAN 63 Query: 62 TLLPFFSNERVIRAAGGVGALSDWL-LRHVTSCQWPNGDYHH------TETVIHRYGTGA 114 +++ R G W+ R CQ P D HH + + + Sbjct: 64 PPASLMKIQKLKRW--GNQKYLQWVKSRPCCLCQKPADDAHHLIGYGYGGIGVKAHDLFS 121 Query: 115 MVLCWHCDNQLRDQTSES 132 + LC ++L Sbjct: 122 IPLCRGHHSELHHDPKAW 139 >UniRef50_A3X1N6 Putative uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3X1N6_9BRAD Length = 384 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 30/119 (25%), Positives = 47/119 (39%), Gaps = 5/119 (4%) Query: 211 ATSILKQRTKNLAPLPYAHQQQKSPQEKTVVSITVDPESPESFMKLPKRRRWVKEKYTRW 270 A L A P T + + + + + +K ++R +++ R+ Sbjct: 232 APDHLTGLEPAKATATSEDVGAVVPNSSTPLMVRANSQPVKPLLKTVRQR---SKRHLRF 288 Query: 271 VKTQPCACCGMPADDPHHLIGHGQGGMGTKAHDLFVLPLCRKHHNELHT--DTVAFEDK 327 V +QPC C D HHL + K D F +PLCR HH ELH + A+ Sbjct: 289 VASQPCLICKGSPCDAHHLKFAQARSLSMKVSDEFTVPLCRSHHQELHRHGNEAAWWAN 347 >UniRef50_Q6V7S4 Bcep22gp20 n=3 Tax=root RepID=Q6V7S4_9CAUD Length = 166 Score = 94.9 bits (234), Expect = 4e-18, Method: Composition-based stats. Identities = 27/141 (19%), Positives = 47/141 (33%), Gaps = 21/141 (14%) Query: 215 LKQRTKNLAPLPYAHQQQKSPQEKTVVSITVDPESPESFMKLPKRRRWVKEKYTRWVKTQ 274 L + T + +A P+ + P + ++ V Sbjct: 12 LARGTSTMKRTTFARGSTPKPRRAGPPKVRDTPRPRIV-------PTALAREHMGRVAEL 64 Query: 275 PCACC-----GMPADDPHHLIGHGQGGMGTKAHDLFVLPLCRKHHN------ELHTDTVA 323 C C G + HH + G G ++ D +PLC HH LH + Sbjct: 65 GCIVCLNMRLGRSPAEVHHARCYAGG--GQRSSDFHTIPLCPLHHRLGGAGVALHAGRQS 122 Query: 324 FEDKYGSQLELIFRFIDRALA 344 F +G++ EL+ + + R L Sbjct: 123 FARNFGTEAELLLQVL-RMLG 142 >UniRef50_D0IZ16 Putative uncharacterized protein n=1 Tax=Comamonas testosteroni CNB-2 RepID=D0IZ16_COMTE Length = 198 Score = 90.6 bits (223), Expect = 7e-17, Method: Composition-based stats. Identities = 25/122 (20%), Positives = 39/122 (31%), Gaps = 13/122 (10%) Query: 223 APLPYAHQQQKSPQEKTVVSITVDPESPESFMKLPKRRRWVKEKYTRWVKTQPCACCGMP 282 + + ++T+ P + + + +PK E Y R V PC CG+ Sbjct: 49 ERAARQIESALATASMVPENVTMTPGAGTTGIVVPKEHAIESEPYRRLVAELPCFWCGIS 108 Query: 283 ADDPHHLIGHGQGGMGTKAHDLFVLPLCRK------HH------NELHTDTVAFEDKYGS 330 H + G+G K D PLC H L T +YG Sbjct: 109 GY-SQHAHLNYGKGLGLKTDDRTGFPLCCSRPGIEGCHVAYDNYRLLETGGREAHREYGI 167 Query: 331 QL 332 + Sbjct: 168 EA 169 >UniRef50_A4W6Z4 Putative uncharacterized protein n=5 Tax=Proteobacteria RepID=A4W6Z4_ENT38 Length = 102 Score = 85.2 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 34/93 (36%), Gaps = 10/93 (10%) Query: 257 PKRRRWVKEKYTRWVKTQ-PCACCGMPADDPHHLIGHGQGGMGTKAHDLFVLPLCRKHHN 315 P +R + +K+ V C CG H + GMG K D +C H+ Sbjct: 8 PGQRIYRSKKWLAAVGQIEQCVLCGSWGIQVAH--RNEGKGMGLKVDDCATAAICVCCHD 65 Query: 316 ELHTDTVAFEDKYGSQLELIFRFIDRALAIGVL 348 + + + + +DRA+ + V+ Sbjct: 66 SIDNGSKL-------SRDERRQLMDRAIVLTVI 91 >UniRef50_A6WVD9 Putative uncharacterized protein n=1 Tax=Ochrobactrum anthropi ATCC 49188 RepID=A6WVD9_OCHA4 Length = 131 Score = 84.1 bits (206), Expect = 7e-15, Method: Composition-based stats. Identities = 28/93 (30%), Positives = 39/93 (41%), Gaps = 11/93 (11%) Query: 248 ESPESFMKLP----KRRRWVKEKYTRWVKTQPCACCGMPADDPHHLI------GHGQGGM 297 P +F P KR R K+ W++T PC G + H+ G G Sbjct: 8 REPTAFSTSPSKGQKRPRRENGKHLAWIRTLPCVITGQYGVEAAHIRYAAPEYGKRDTGK 67 Query: 298 GTKAHDLFVLPLCRKHHNELHT-DTVAFEDKYG 329 K D +V+PL + H E H+ + V F KYG Sbjct: 68 AEKPDDDWVIPLAPELHREQHSMNEVKFWAKYG 100 >UniRef50_A6UAT1 Putative uncharacterized protein n=1 Tax=Sinorhizobium medicae WSM419 RepID=A6UAT1_SINMW Length = 246 Score = 83.7 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 23/81 (28%), Positives = 32/81 (39%), Gaps = 12/81 (14%) Query: 244 TVDPESPESFMKLPKRRRWVKEKYTRWVKTQPCACCGMPADDPHHL------IGHGQGGM 297 +V P+ PKR+ + Y ++ PC G + HL GH G Sbjct: 115 SVRPDP------TPKRKPTKNKDYLAFIHELPCCVSGRYGVEAAHLSCAAPRFGHYGRGK 168 Query: 298 GTKAHDLFVLPLCRKHHNELH 318 G+K D +VLPL H H Sbjct: 169 GSKVSDRWVLPLHPDEHRRQH 189 >UniRef50_A1TMU5 Putative uncharacterized protein n=1 Tax=Acidovorax citrulli AAC00-1 RepID=A1TMU5_ACIAC Length = 200 Score = 82.2 bits (201), Expect = 2e-14, Method: Composition-based stats. Identities = 23/95 (24%), Positives = 28/95 (29%), Gaps = 8/95 (8%) Query: 231 QQKSPQEKTVVSITVDPESPESFMKLPKRRRWVKEKYTRWVKTQPCACCGMPADDPHHLI 290 Q + P V + + +PK E Y R V PC CG H Sbjct: 59 QARRPAFAPAV-VHALVDPQAVPTTIPKEELLRSEPYRRLVAAMPCKACGRHG-HSQHAH 116 Query: 291 GHGQGGMGTKAHDLFVLPLCRK------HHNELHT 319 + GMG K D PLC H Sbjct: 117 ENQGKGMGLKVDDRRGFPLCTVAPGRVGCHELFDQ 151 >UniRef50_B4BNF1 HNH nuclease n=3 Tax=Geobacillus RepID=B4BNF1_9BACI Length = 152 Score = 80.6 bits (197), Expect = 9e-14, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 6/87 (6%) Query: 256 LPKRRRWVKE-KYTRWVKTQPCAC--CGMPADDPHHLIGHGQGGMGTKAHDLFVLPLCRK 312 PK R + + +Y R ++ C C CG P + HH+ QGG G + + PLC Sbjct: 24 SPKTRGSISKTEYNRMIEVFGCRCMMCGDPRIEAHHVRFRSQGGRGKWRN---LAPLCHC 80 Query: 313 HHNELHTDTVAFEDKYGSQLELIFRFI 339 H +H + E + ++ ++ Sbjct: 81 CHQAVHQNRALAERLMAMREDMFGKWY 107 >UniRef50_B2U8H4 Putative uncharacterized protein n=1 Tax=Ralstonia pickettii 12J RepID=B2U8H4_RALPJ Length = 95 Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 25/85 (29%), Positives = 32/85 (37%), Gaps = 5/85 (5%) Query: 261 RWVKEKYTRWVKTQPCACCGMPAD-DPHHLIGHGQG-GMGTKAHDLFVLPLCRKHHNELH 318 + E R V + PC CG H G GMG KA D ++ LC H E Sbjct: 2 TYRSEPLRRAVASLPCVNCGRHGATQAAHSNLQEHGKGMGHKASDAAIMALCTVCHTEFD 61 Query: 319 TDTVAFEDKYGSQLELIFRFIDRAL 343 + + EL FR+I L Sbjct: 62 QGKGLTKAD---RRELTFRWITATL 83 >UniRef50_B7I7I6 Putative uncharacterized protein n=4 Tax=Acinetobacter RepID=B7I7I6_ACIB5 Length = 91 Score = 78.3 bits (191), Expect = 4e-13, Method: Composition-based stats. Identities = 23/83 (27%), Positives = 31/83 (37%), Gaps = 10/83 (12%) Query: 263 VKEKYTRWVKTQPCACCGMPADDPHHLIGHGQG-GMGTKAHDLFVLPLCRKHHNELHTDT 321 K ++ PC CG P H G G G KA D + +PLC H Sbjct: 2 RDAKRLAAIRKLPCVRCGYPHSQAAHSNFSEHGKGKGIKADDKYTIPLCHSCHQ------ 55 Query: 322 VAFEDKY-GSQLELIFRFIDRAL 343 + D+Y G L + D+ L Sbjct: 56 --WFDQYRGMGLVESKEWFDKML 76 >UniRef50_B9L925 MutS-related protein n=1 Tax=Nautilia profundicola AmH RepID=B9L925_NAUPA Length = 917 Score = 78.3 bits (191), Expect = 4e-13, Method: Composition-based stats. Identities = 27/105 (25%), Positives = 41/105 (39%), Gaps = 11/105 (10%) Query: 222 LAPLPYAHQQQKSPQEKTVVSITVDPESPESFMKLPKRRRWVKEKYTRWVKTQPCACCGM 281 A Y ++ E +T + E +K K R +V T CA CG Sbjct: 798 FAKSIYMDKEFIKLAENIRKKLTDEYSEIELLLKKKKSRYNKNL----FVTT--CAICGK 851 Query: 282 PADDPHHLIGHGQGGMG----TKAHDLF-VLPLCRKHHNELHTDT 321 P +D HH+ + G H + ++PLC+KHH +H Sbjct: 852 PVEDVHHIKEKEKAKEGFIDHMPVHHKYNLIPLCKKHHKMVHEGK 896 >UniRef50_C6BBU0 Putative uncharacterized protein n=1 Tax=Ralstonia pickettii 12D RepID=C6BBU0_RALP1 Length = 91 Score = 74.8 bits (182), Expect = 5e-12, Method: Composition-based stats. Identities = 19/89 (21%), Positives = 36/89 (40%), Gaps = 10/89 (11%) Query: 261 RWVKEKYTRWVKTQPCACC-----GMPADDPHHLIGHGQGGMGTKAHDLFVLPLCRKHHN 315 ++ Y V C C G + HH+ GM +A + +PLC +HH Sbjct: 2 TRAEKDYLGRVAAIGCVLCKRLGYGETPAEIHHV--REGQGMAQRAENWLAVPLCPEHHR 59 Query: 316 ---ELHTDTVAFEDKYGSQLELIFRFIDR 341 +H + +A + +++L+ I+ Sbjct: 60 GKTGIHGNRMALKQVKADEVDLLAWTIEE 88 >UniRef50_A7MGK3 Putative uncharacterized protein n=7 Tax=Enterobacteriaceae RepID=A7MGK3_ENTS8 Length = 98 Score = 74.4 bits (181), Expect = 6e-12, Method: Composition-based stats. Identities = 17/86 (19%), Positives = 27/86 (31%), Gaps = 10/86 (11%) Query: 262 WVKEKYTRWVKTQPCAC-CGMPADDPHHLIGHGQGGMGTKAHDLFVLPLCRKHHNELHTD 320 + K+ V+ C C H + GMG K D LC H+ + Sbjct: 9 YRSAKWLAAVRQLDCCVLCRRWGVQAAH--RNEDKGMGLKVDDSLTAALCVDCHHAIDNG 66 Query: 321 TVAFEDKYGSQLELIFRFIDRALAIG 346 + E +DRA+ + Sbjct: 67 SELT-------REERRALMDRAIVLT 85 >UniRef50_A0KJW9 Putative uncharacterized protein n=5 Tax=Gammaproteobacteria RepID=A0KJW9_AERHH Length = 105 Score = 74.1 bits (180), Expect = 7e-12, Method: Composition-based stats. Identities = 20/93 (21%), Positives = 37/93 (39%), Gaps = 12/93 (12%) Query: 259 RRRWVKEKYTRWVKTQPCACC-----GMPADDPHHLIGHGQGGMGTKAHDLFVLPLCRKH 313 + +++ V + C C G + HH+ GM +A VLPLC +H Sbjct: 2 SKTKADKQWLDDVSSLGCVACRNAGLGPSLAEIHHV--RSGSGMAQRAEHTRVLPLCPRH 59 Query: 314 HNE-----LHTDTVAFEDKYGSQLELIFRFIDR 341 H H +++ ++GS+ L+ + Sbjct: 60 HRACYPTGFHAAPRSWQVEHGSEEALLDQVARE 92 >UniRef50_A7ILD6 Putative uncharacterized protein n=2 Tax=Xanthobacter autotrophicus Py2 RepID=A7ILD6_XANP2 Length = 163 Score = 66.7 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 32/92 (34%), Gaps = 16/92 (17%) Query: 250 PESFMKLPKRR-RWVKEKYTRWVKTQPCACCG-----MPADDPHHL------IGHGQGGM 297 P K P+ R R ++ V+ PC G ++ H+ G G Sbjct: 21 PVPSRKTPRERGRQEDAEHLDLVRDLPCLASGTLPTVRRRNEAAHIRYSSSAFGKVNPGG 80 Query: 298 GTKAHDLFVLPLCRKHHN----ELHTDTVAFE 325 G K D + +PL + H H++ + Sbjct: 81 GAKPDDRWTVPLSPEKHQGSKDAQHSNGEEWW 112 >UniRef50_Q2G3W4 Putative uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans DSM 12444 RepID=Q2G3W4_NOVAD Length = 107 Score = 66.0 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 22/63 (34%) Query: 257 PKRRRWVKEKYTRWVKTQPCACCGMPADDPHHLIGHGQGGMGTKAHDLFVLPLCRKHHNE 316 K ++++ V PC G HH+ G+ V+PL ++H Sbjct: 3 KKPPTAAEKRHMARVAEMPCLVSGRSPVTLHHVTGYADRMGRFARSHKLVVPLAPEYHLI 62 Query: 317 LHT 319 H Sbjct: 63 QHD 65 >UniRef50_C6JMX6 Predicted protein n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JMX6_FUSVA Length = 165 Score = 63.3 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 24/75 (32%), Positives = 31/75 (41%), Gaps = 10/75 (13%) Query: 267 YTRWVKTQPCACCGMPADDPHHLIGHGQGGM-GTKAHDLFVLP---LCRKHHNELHT--D 320 Y V + C CG PHH H M G D LP LC HH+ELH+ + Sbjct: 67 YLCLVNKR-CCICGRKVTFPHH---HKSVSMVGGYKKDKGTLPIVALCPYHHSELHSSIN 122 Query: 321 TVAFEDKYGSQLELI 335 + K+ + LI Sbjct: 123 KFDWIAKHETYAPLI 137 >UniRef50_A1TN12 Putative uncharacterized protein n=3 Tax=Acidovorax RepID=A1TN12_ACIAC Length = 164 Score = 59.0 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 25/115 (21%), Positives = 34/115 (29%), Gaps = 9/115 (7%) Query: 219 TKNLAPLPYAHQQQKSPQEKTVVSITVDPESPESFMKLPKRRRWVKEKYTRWVKTQPCAC 278 L + + +V + +PK E Y R V PC Sbjct: 14 EPGLDREQRLADRAARAMAEVRPRASVVMPCGDLAPSVPKAAPVRSEAYRRLVAALPCMA 73 Query: 279 CGMPA-DDPHHLIGHGQGGMGTKAHDLFVLPLC------RKHHNELHTDTVAFED 326 CGMP H + GMG K DL PLC H+ + + Sbjct: 74 CGMPGLSQCAHA--NTGKGMGLKVCDLESFPLCSDRPGTPGCHSLFDQGALLSKA 126 >UniRef50_Q2FUP5 Phi PV83 orf 19-like protein n=90 Tax=root RepID=Q2FUP5_STAA8 Length = 230 Score = 59.0 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 23/56 (41%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Query: 276 CACCGMPADDPHH--LIGHGQGGMGTKAHDLFVLPLCRKHHNELHT-DTVAFEDKY 328 C CG P D H +G G +D VL LCR+HHNE H +F+DKY Sbjct: 145 CVICGKPHADLAHYEAVGRGMNRNKMNHYDKHVLALCRQHHNEQHAIGVKSFDDKY 200 >UniRef50_A6M989 Putative uncharacterized protein n=1 Tax=Geobacillus virus E2 RepID=A6M989_9VIRU Length = 188 Score = 57.1 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 31/116 (26%), Positives = 43/116 (37%), Gaps = 15/116 (12%) Query: 210 TATSILKQRTKNLAPLPYAHQQQKSPQEKTVVSITVDPESPESFMKLPKRRRWVKE-KYT 268 A +K R L P + +K + V P K R V + +YT Sbjct: 9 PAAKPVKARKDKLKPRVREKKPKKRKGKAQTYKGRVIP--------SRKVRGSVSKREYT 60 Query: 269 RWVKTQP--CACCGM-PADDPHHLIGHGQGGMGTKAHDLFVLPLCRKHHNELHTDT 321 R V+ C CG + HH+ QGG G + + PLC+ HH H D Sbjct: 61 RMVEEFGSACLVCGSTYNIEAHHVRFRSQGGRGKWRN---LAPLCKIHHQLAHQDR 113 >UniRef50_Q30QK8 DNA mismatch repair protein MutS n=3 Tax=Epsilonproteobacteria RepID=Q30QK8_SULDN Length = 1002 Score = 54.4 bits (129), Expect = 5e-06, Method: Composition-based stats. Identities = 21/106 (19%), Positives = 37/106 (34%), Gaps = 12/106 (11%) Query: 222 LAPLPYAHQQQKSPQEKTVVSITVDPESPESFMKLPKRRRWVKEKYTRWVKTQPCACCGM 281 A + + D + E +K KY + + C CG Sbjct: 857 FAKSLHMDSDFLDIANSIRKRLAKDFDELELLVKK------KSSKYNKELYVTKCVICGD 910 Query: 282 PADDPHHLIGH----GQGGMGTKAHDLF--VLPLCRKHHNELHTDT 321 A+D HH+ G +G + ++PLC++HH ++H Sbjct: 911 MAEDVHHIKHKSLADEDGFIGHFHKNTKHNLIPLCKEHHKKIHEGK 956 >UniRef50_A6Q2C2 DNA mismatch repair ATPase MutS n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q2C2_NITSB Length = 971 Score = 53.6 bits (127), Expect = 9e-06, Method: Composition-based stats. Identities = 22/105 (20%), Positives = 37/105 (35%), Gaps = 11/105 (10%) Query: 222 LAPLPYAHQQQKSPQEKTVVSITVDPESPESFMKLPKRRRWVKEKYTRWVKTQPCACCGM 281 A + + +T + E + + R Y + V CA C Sbjct: 852 FAKALHMDKIFLDYAYSIRKKLTKEYSEIELLKQKKRSR------YNKGVYLTKCAICNE 905 Query: 282 PADDPHHLIGHGQGGMG----TKAHDLF-VLPLCRKHHNELHTDT 321 ++ HH+ + G KA+ F ++PLC KHH +H Sbjct: 906 VVEEVHHIEPKAKAKGGFIDHFKANHKFNLIPLCSKHHKMVHEGK 950 >UniRef50_C5A7R6 Putative uncharacterized protein n=1 Tax=Burkholderia glumae BGR1 RepID=C5A7R6_BURGB Length = 111 Score = 53.3 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 26/78 (33%), Gaps = 9/78 (11%) Query: 257 PKRRRWVKEKYTRWVKTQPCACCG-MPADDPHHLIGHGQGGMGTKAHDLFVLPLC----- 310 PK + E R V T PC CG H+ G KA D + LC Sbjct: 9 PKVLTFRSEDLRRLVVTLPCMNCGVERYTQAAHMNL--GKGGALKASDAAIAALCCDRPG 66 Query: 311 -RKHHNELHTDTVAFEDK 327 R H L V + + Sbjct: 67 IRGCHAMLDQGGVMTKSE 84 >UniRef50_D1B043 DNA mismatch repair protein MutS domain protein n=2 Tax=Campylobacterales RepID=D1B043_SULD5 Length = 977 Score = 49.8 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 15/106 (14%), Positives = 30/106 (28%), Gaps = 12/106 (11%) Query: 222 LAPLPYAHQQQKSPQEKTVVSITVDPESPESFMKLPKRRRWVKEKYTRWVKTQPCACCGM 281 A + + + ++ + E + + + Y CA C Sbjct: 858 FAKSLHMDSEFIKMAYEIRRNLAGELGEMELLKQKKRSKYNKNL-YLA-----KCALCDA 911 Query: 282 PADDPHHLIGHGQGGMGTKAHDLF------VLPLCRKHHNELHTDT 321 ++ HH+ ++PLC KHH +H Sbjct: 912 YVEEVHHIHAQEMADKHGNIEHFHQNHRYNLIPLCAKHHKMVHEGK 957 >UniRef50_Q5VJ21 Putative uncharacterized protein n=1 Tax=Aeromonas hydrophila RepID=Q5VJ21_AERHY Length = 302 Score = 49.0 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 22/48 (45%), Gaps = 5/48 (10%) Query: 303 DLFVLPLCRKHHNE-----LHTDTVAFEDKYGSQLELIFRFIDRALAI 345 VLPLC +HH H +++ ++GS+ L+ + +I Sbjct: 20 HTQVLPLCPRHHRACYPTGFHAAPRSWQVEHGSEEVLLEQVARYEKSI 67 >UniRef50_C7XUW3 Putative uncharacterized protein n=1 Tax=Lactobacillus coleohominis 101-4-CHN RepID=C7XUW3_9LACO Length = 220 Score = 48.6 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 8/71 (11%) Query: 254 MKLPKRRRWVKEKYTRWVKTQPCACCGMPADDPHHLIGHGQGGMGTKAHD-----LFVLP 308 +K + K +KT+ C CG P D H + GMG H+ ++ + Sbjct: 109 LKTWEAIPNEFPKQVLAMKTRSCVICGKPNADLAH---YRAVGMGRNRHEIDERKMYFMS 165 Query: 309 LCRKHHNELHT 319 LCR+HH H Sbjct: 166 LCREHHQYQHQ 176 >UniRef50_Q94Z00 Orf757 n=4 Tax=stramenopiles RepID=Q94Z00_PYLLI Length = 757 Score = 47.5 bits (111), Expect = 8e-04, Method: Composition-based stats. Identities = 20/79 (25%), Positives = 30/79 (37%), Gaps = 17/79 (21%) Query: 274 QPCACCGMPADDPHHLI-------GHGQGGMGTK-----AHDLFVLPLCRKHHNELHTDT 321 C CG + HH+ + GG+ A + +PLC+ HH LH T Sbjct: 681 MGCLVCGETPSEMHHVRKIKDLKSRYDSGGIAFWTLQMAAINRKQIPLCKIHHLALHRGT 740 Query: 322 VAFEDKYGSQLELIFRFID 340 + S+ EL+ I Sbjct: 741 LT-----HSERELLKEAIR 754 >UniRef50_B3XS05 Putative uncharacterized protein n=1 Tax=Lactobacillus reuteri 100-23 RepID=B3XS05_LACRE Length = 228 Score = 46.7 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 26/58 (44%), Gaps = 6/58 (10%) Query: 276 CACCGMPADDPHHLIGH--GQGGMGTKAHD--LFVLPLCRKHHNELHT-DTVAFEDKY 328 C CG AD HH+ G G G K + PLCR HH E+ + FE KY Sbjct: 147 CVICGKKADF-HHVEGSVVGMGNNRNKIDHSKRELYPLCRFHHQEIERLNNKRFEAKY 203 >UniRef50_B5W3B8 HNH endonuclease n=1 Tax=Arthrospira maxima CS-328 RepID=B5W3B8_SPIMA Length = 80 Score = 46.7 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 27/69 (39%), Gaps = 8/69 (11%) Query: 258 KRRRWVKEKYTRWVKTQP---CACCGMPADDPH--HLIGHGQGGMGTKAHDLFVLPLCRK 312 K+R +K + VK + C CG + H H+I + GG A ++ LC Sbjct: 7 KKRPNEHKKAQKLVKQRDGNECEICGKIGEIAHGHHVIAYSDGG---PADLTNMMTLCPD 63 Query: 313 HHNELHTDT 321 H H Sbjct: 64 CHRAYHNGE 72 >UniRef50_Q0EWL6 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EWL6_9PROT Length = 240 Score = 46.7 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 30/145 (20%), Positives = 51/145 (35%), Gaps = 14/145 (9%) Query: 181 EAVSRRSLGLPAEKICSVYRESDIVPGELTATSILKQRTKNLAPLPYAHQQQKSPQEKTV 240 E V +L + +E I P + R P+ + + Sbjct: 47 EKVCVEALLKRLRVDATPVKEVKISPQKQRKPIARSTRPIARTPITRSTKPIARQPASFP 106 Query: 241 VSITVDPESPESFMKLPKRRRW--VKEKYTRWVKTQPCACCGMPAD--------DPHHLI 290 + + +S + K PK R + ++Y+ W+ QPC GM AD HH+ Sbjct: 107 SNKSGSVQSWRASGKKPKPGRNDIIDDQYSAWLGGQPCIITGMVADRGVGPDSIHCHHIR 166 Query: 291 GHGQGGMGTKAHDLFVLPLCRKHHN 315 G +G + +D +PL H Sbjct: 167 GRSRG----RRNDYAQVPLIGHMHT 187 >UniRef50_C2EXV4 Putative uncharacterized protein n=3 Tax=Lactobacillus RepID=C2EXV4_LACRE Length = 226 Score = 46.3 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 3/61 (4%) Query: 271 VKTQPCACCGMPADDPHHLIGHGQGGMGTKAHD--LFVLPLCRKHHNELHT-DTVAFEDK 327 +KT+ CA C D HH+ G G + + +++ PLCR HH HT F K Sbjct: 137 IKTKRCAICLKEHADIHHVTAVGMGRNRNEINHVGMYIEPLCRVHHTIFHTIGAKNFMAK 196 Query: 328 Y 328 Y Sbjct: 197 Y 197 >UniRef50_O63852 Mitochondrial DNA mismatch repair protein mutS homolog n=428 Tax=Octocorallia RepID=MSHM_SARGL Length = 982 Score = 46.3 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 24/162 (14%), Positives = 54/162 (33%), Gaps = 17/162 (10%) Query: 172 CNQVVDALPEAVSRRSLGLPAEKICSVYRESDIVPGELTATSILKQRTKNLAPLPYAHQQ 231 +QV + V L + ++ ++ E + PG + ++ + + Sbjct: 812 LHQVCSLIDSPVRYYHLSVIQQENSALIYERKLKPGPGPSQYGIEVMGHIINDKKFY--- 868 Query: 232 QKSPQEKTVVSITVDPESPESFMKLPKRRRWVKEKYTRWVKTQPCACCGMPADDPHHLIG 291 ++ E P + KY V C CG PAD HH+ Sbjct: 869 ----NSALKYRKLINWEPPSQGELTV----FRPSKYNAQVFIDSCEICGAPADAVHHIKP 920 Query: 292 H-GQGGMGTKAHDLF--VLPLCRKHHNELHTDTVA---FEDK 327 + + + ++P+C H ++H + ++ ++ Sbjct: 921 KSEHKKLCNRKLNRRSNLVPVCSSCHLDIHRNKISILGWKRT 962 >UniRef50_Q03VL2 Putative uncharacterized protein n=1 Tax=Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 RepID=Q03VL2_LEUMM Length = 234 Score = 46.3 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 21/56 (37%), Positives = 25/56 (44%), Gaps = 3/56 (5%) Query: 276 CACCGMPADDPHHLIGHGQGGMGTKAHDL--FVLPLCRKHHNELHT-DTVAFEDKY 328 C CG D HHL GQG K + L + LCR HH E H+ F K+ Sbjct: 158 CVICGKRPSDLHHLDTIGQGVDRRKTNHLKHRAVQLCRIHHQEAHSLGIETFLQKH 213 >UniRef50_C4WNE8 Putative uncharacterized protein n=1 Tax=Ochrobactrum intermedium LMG 3301 RepID=C4WNE8_9RHIZ Length = 282 Score = 45.9 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 27/179 (15%), Positives = 49/179 (27%), Gaps = 23/179 (12%) Query: 157 QERELSLAELSWWAVCNQVVDA--LPEAVSRRSLGLPAEKICSVYRESDIVPGELTATSI 214 ++ + +L + + D L V S + I+ EL Sbjct: 93 RDHAMLGKDLLLFESLGKGKDLIFLGSFVCE-SWRWGQSPDRNDDMRKAII-FELRNLEN 150 Query: 215 LKQRTKNLAPLPYAHQQQKSPQEKTVVSITVDPESPESFMKLPKRRRWVKEKYTRWVKTQ 274 + + + P+P + ++ + R Y Sbjct: 151 IVEAVDDEQPVPAVDLAAMRDLARQA----AGSREGKASTRTIYERSRHVRDYVLARANG 206 Query: 275 PCACC----------GMPADDPHHLIGHGQGGMGTKAHD-LFVLPLCRKHHNELHTDTV 322 C C G P +PHH+ GG D +V+ LC H ++H Sbjct: 207 HCEGCSCQAPFLRINGQPYLEPHHIRRVSDGG----PDDPSYVIALCPTCHRKVHHGQG 261 >UniRef50_C4ZC63 Putative uncharacterized protein n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4ZC63_EUBR3 Length = 123 Score = 45.6 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 22/83 (26%), Positives = 33/83 (39%), Gaps = 19/83 (22%) Query: 276 CACCGMPADDPHHLIGHGQGGMGTKAHDLFVLPLCRKHHNE------LHTDTV------- 322 C CG P++ HHL+ G G D +P+C HN +H + + Sbjct: 13 CFICGRPSEAEHHLVF-GTAGRELSEKDGLKVPVCNNCHNMGEILMRIHGNPMAERMSKI 71 Query: 323 ----AFEDKYGSQ-LELIFRFID 340 A+E +Y Q + R ID Sbjct: 72 IGQLAWEKEYALQKADEFARIID 94 >UniRef50_Q03RB7 Putative uncharacterized protein n=1 Tax=Lactobacillus brevis ATCC 367 RepID=Q03RB7_LACBA Length = 233 Score = 45.2 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 2/73 (2%) Query: 276 CACCGMPADDPH-HLIGHGQGGMGTKAHDLFVLPLCRKHHNELHT-DTVAFEDKYGSQLE 333 C C PAD H H +G G+ +V+ LCR+HH E H +F + + Sbjct: 145 CMICNQPADIAHVHAVGIGRDRNHISHIGNYVMALCRRHHQEQHRVGIKSFMKENQLKGV 204 Query: 334 LIFRFIDRALAIG 346 + I + L +G Sbjct: 205 KVTPEIAKMLKLG 217 >UniRef50_C5RA90 Putative uncharacterized protein n=1 Tax=Weissella paramesenteroides ATCC 33313 RepID=C5RA90_WEIPA Length = 236 Score = 45.2 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 4/56 (7%) Query: 276 CACCGMPADDPHHLIGHGQGGMGTKAHDL--FVLPLCRKHHNELHT-DTVAFEDKY 328 C CG A D HHL G G ++ LCR+HH E H F++KY Sbjct: 144 CVICGKHA-DVHHLDTVGMGNDRNLVDHRQKHLIALCREHHQEAHKLGWPTFKEKY 198 >UniRef50_Q7WKA2 Putative uncharacterized protein n=2 Tax=Bordetella bronchiseptica RepID=Q7WKA2_BORBR Length = 138 Score = 44.8 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 37/112 (33%), Gaps = 11/112 (9%) Query: 236 QEKTVVSITVDPESPESFMKLPKRRR-WVKEKYTRWVKTQPCA-----CC---GMPADDP 286 KT + + + PK+R + KY + + C CC G P P Sbjct: 10 SRKTPLRASTGLARAAIKRRAPKKRPGYHDPKYLAACRGERCYQQFAGCCSYKGDPTVVP 69 Query: 287 HHLIGHGQGGMGTKAHDLFVLPLCRKHHNELHTDTVAFEDKYGSQLELIFRF 338 H + G G K D F +P C H + E K + R+ Sbjct: 70 AH--QNQGKGTGLKVPDRFTVPACYHCHTLYDQSGLDREHKRATWDWGYTRW 119 >UniRef50_B1KZ53 Putative uncharacterized protein n=10 Tax=Clostridium RepID=B1KZ53_CLOBM Length = 134 Score = 44.8 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 3/63 (4%) Query: 276 CACCGMPADDPHHLIGHGQGGMGTKAHDLFVLPLCRKHHNELHTDTVAFEDKYGSQLELI 335 C CG + HH+I +GGM + + + LC +HH H+ +LEL Sbjct: 4 CEVCGREGAEIHHIIHKCEGGMDLEINYKY---LCGRHHRGRHSPHKDNNIDISYKLELQ 60 Query: 336 FRF 338 + Sbjct: 61 NKL 63 >UniRef50_D0LCK0 HNH endonuclease n=3 Tax=Gordonia bronchialis DSM 43247 RepID=D0LCK0_GORB4 Length = 418 Score = 44.8 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 23/65 (35%), Gaps = 8/65 (12%) Query: 269 RWVKTQPCAC-CGMPA--DDPHHLIGHGQGGMGTKAHDLFVLPLCRKHHNELHTDTVAFE 325 + C CG PA HH+ + GG + LC H ++H + ++ Sbjct: 325 ALIARDQCCIKCGAPAGWTHAHHITFYSHGGKTVLDNGCL---LCPSCHTDVHHN--GWD 379 Query: 326 DKYGS 330 G Sbjct: 380 VVMGD 384 >UniRef50_UPI0001BCECFE hypothetical protein SnoxA4_08445 n=1 Tax=Selenomonas noxia ATCC 43541 RepID=UPI0001BCECFE Length = 219 Score = 44.4 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 4/56 (7%) Query: 276 CACCGMPADDPHHL--IGHGQGGMGTKAHDLFVLPLCRKHHNELHT-DTVAFEDKY 328 CA CG A + HH+ +G G+ + LPLCR+HH E+H F +Y Sbjct: 143 CAVCGRKA-ELHHVDAVGMGRNRKEICHIGMRALPLCREHHTEIHAVGREDFLRRY 197 >UniRef50_C8P906 Putative uncharacterized protein n=1 Tax=Lactobacillus antri DSM 16041 RepID=C8P906_9LACO Length = 230 Score = 44.4 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 26/75 (34%), Positives = 30/75 (40%), Gaps = 4/75 (5%) Query: 276 CACCGMPADDPHHLIGHGQGGMGTKAHDL--FVLPLCRKHHNELHT-DTVAFEDKYGSQL 332 C CG A D HH+ G G ++ LCR HH E H +VAF KY Sbjct: 148 CLICGRHA-DTHHVDAVGMGRDRNHIDHTKHRLMALCRDHHTEYHKIGSVAFAKKYLITR 206 Query: 333 ELIFRFIDRALAIGV 347 I D IGV Sbjct: 207 LGIRLNADDLKKIGV 221 >UniRef50_UPI0001BC4568 hypothetical protein FuD12_02539 n=1 Tax=Fusobacterium sp. D12 RepID=UPI0001BC4568 Length = 243 Score = 44.0 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 8/75 (10%) Query: 258 KRRRWVKEKYTRWVKTQPCACCGMPADDPHHLIGHGQGGMGTKAHD---LFVLPLCRKHH 314 K + + + K + C CG + HH+ +G G K D V LCRKHH Sbjct: 143 KEQEYEHYIWFCL-KYKACEVCGNVG-ELHHVD--QRGSKGYKTDDGRNERVTCLCRKHH 198 Query: 315 NELHTDTVAFEDKYG 329 +E+H D A+E KYG Sbjct: 199 SEIHADARAYE-KYG 212 >UniRef50_D2RPV1 Restriction endonuclease-like protein n=1 Tax=Haloterrigena turkmenica DSM 5511 RepID=D2RPV1_9EURY Length = 496 Score = 42.9 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 28/134 (20%), Positives = 43/134 (32%), Gaps = 19/134 (14%) Query: 206 PGELTATSILKQRTKNLAPLPYAHQQQKSPQEKTVVSITVDPESPESFMKLPKRRRWVKE 265 P E A + A + + + +T D E + +RR Sbjct: 320 PTEFEALADSVVDGDTETGSASAESETSDDSDGSEPPLTADEEEFTAT-----QRRVRSS 374 Query: 266 KYTRWVKT---QPCACCGMPA--------DDPHHLIGHGQGGMGTKAHDLFVLPLCRKHH 314 + + VKT + CA CG + H+ + G T + L LCR HH Sbjct: 375 TFAKRVKTAYGRRCAICGASRESPAGTVDIEAAHIYPKKENGRDTVRN---GLALCRLHH 431 Query: 315 NELHTDTVAFEDKY 328 +A D Y Sbjct: 432 WAFDAGWLAVTDDY 445 >UniRef50_UPI0001C369A3 hypothetical protein ChatD1_02366 n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C369A3 Length = 101 Score = 42.5 bits (98), Expect = 0.021, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 30/78 (38%), Gaps = 8/78 (10%) Query: 276 CACCGMPADDPHHLIGHGQGGMGTKAHDLFVLPLCRKHHNE------LHTDTVAFE-DKY 328 C CG PAD HHLI G D +P+C H +H + +A + K Sbjct: 12 CFFCGRPADCEHHLIF-GSANRELADEDCLKVPICNNCHTAGKVNSRIHDNPMAEKLSKM 70 Query: 329 GSQLELIFRFIDRALAIG 346 Q+ + + +G Sbjct: 71 LGQMAYEKELALKMVPMG 88 >UniRef50_C6P1I9 Putative uncharacterized protein n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1I9_9PROT Length = 85 Score = 42.5 bits (98), Expect = 0.021, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 33/88 (37%), Gaps = 14/88 (15%) Query: 259 RRRWVKEKYTRWVKTQPCACCGMP-ADDPHHLIGHGQGGMGTKAHDLFVLPLCRKHHN-- 315 + + V++ PC+ C MP + HH+ ++ + + LC H Sbjct: 4 SYTKHEHAHIDRVRSLPCSVCDMPGPSEAHHI---------SQDNPWTAVALCTDCHRHP 54 Query: 316 --ELHTDTVAFEDKYGSQLELIFRFIDR 341 H + ++ K +++ + I R Sbjct: 55 KDGWHGQRLIWKVKKMVEIDALGVTIKR 82 >UniRef50_O03913 Rorf242 protein n=7 Tax=root RepID=O03913_9CAUD Length = 242 Score = 42.5 bits (98), Expect = 0.026, Method: Composition-based stats. Identities = 24/75 (32%), Positives = 32/75 (42%), Gaps = 5/75 (6%) Query: 258 KRRRWVKEKYT-RWVKTQPCACCGMPADDPHHLIGHGQGGMGTKAHD--LFVLPLCRKHH 314 K +E Y + + + C CG A D HH+ G G T V+ LCR HH Sbjct: 131 KLLPHEQEYYLFQCCRHRVCMICGNRA-DIHHVDVIGAGLNRTHVDHTKRHVMALCRIHH 189 Query: 315 NELHT-DTVAFEDKY 328 +E+ AF KY Sbjct: 190 SEIEQIGANAFSAKY 204 >UniRef50_Q7WLR3 Putative uncharacterized protein n=1 Tax=Bordetella bronchiseptica RepID=Q7WLR3_BORBR Length = 164 Score = 42.1 bits (97), Expect = 0.032, Method: Composition-based stats. Identities = 25/147 (17%), Positives = 40/147 (27%), Gaps = 18/147 (12%) Query: 215 LKQRTKNLAPLPYAHQQQKSPQEKTVVSITVDPESPESFM-------KLPKRRRWVKEKY 267 + +RT P + V + P P K P + + Sbjct: 1 MMRRTPLTRKAPMKRGEALRSA---VPMMRATPMPPPRAAMKARKRGKKPPKTIYRNPAL 57 Query: 268 TRWVKTQPCAC-----C--GMPADDPHHLIG-HGQGGMGTKAHDLFVLPLCRKHHNELHT 319 + + C C G + H G G KAHD + C H + Sbjct: 58 LALAEGENCLLRVPKYCQGGTDSTVACHSNRLRDGKGKGIKAHDWAIAFGCSGCHWFIDE 117 Query: 320 DTVAFEDKYGSQLELIFRFIDRALAIG 346 E K + + R +A+G Sbjct: 118 SKAPLELKLSYFIPGMRLTRLRIIAMG 144 >UniRef50_C7QFC8 HNH endonuclease n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7QFC8_CATAD Length = 391 Score = 42.1 bits (97), Expect = 0.032, Method: Composition-based stats. Identities = 35/156 (22%), Positives = 54/156 (34%), Gaps = 11/156 (7%) Query: 186 RSLGLPAEKICSVYRESDIVPGELTATSILKQRTKNLAPLPYAHQQQKSPQEKTVVSITV 245 R+ LP + A A + E + ++ V Sbjct: 194 RAGDLPQRHNGPTTMTIVMRADTAQALPGAPAARTGRGRAVPAAEAHMLRCEAALRAVLV 253 Query: 246 DPESPESFMKLPKRRRWVKEKYTRW-VKTQPCAC--CGMPA--DDPHHLIGHGQGGMGTK 300 D + E + KRR + +Y V+ C C P D HH I G GG T Sbjct: 254 DGD-GEILWQGRKRRLATRAQYEAMAVRDGGCTAPGCDRPPRECDAHHDIPWGAGGH-TD 311 Query: 301 AHDLFVLPLCRKHHNELHTDTVAFEDKYGSQLELIF 336 + + LCR+HH ELH ++ ++G Q + Sbjct: 312 VDQMRL--LCRRHHRELHD--ELWQRQHGWQDAEVR 343 >UniRef50_C9RBS6 HNH endonuclease n=4 Tax=Ammonifex degensii KC4 RepID=C9RBS6_AMMDK Length = 388 Score = 41.7 bits (96), Expect = 0.039, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 44/123 (35%), Gaps = 5/123 (4%) Query: 228 AHQQQKSPQEKTVVSITVDPESPESFMKLPKRRRWVKEKYTRWVKTQPCACCGMPAD-DP 286 A + + K VD E S +K P + + C CG Sbjct: 140 AIYRVLADLAKIAPISGVDVELVSSGVKNPALPG-KSTREKVLNRDGACVLCGSTRRLQR 198 Query: 287 HHLIGHGQGGMGTKAHDLFVLPLCRKHHNELHTDTVAFEDKYGSQLELIFRFIDRALAIG 346 HHL+ +GG T + + LC + H +LH + + + + + +A + Sbjct: 199 HHLVPRSKGGTDTPENQVL---LCAECHRKLHAGGATLDRRGKTFAWVAHAVLGKAYLLA 255 Query: 347 VLA 349 +L+ Sbjct: 256 LLS 258 >UniRef50_C7NG21 HNH endonuclease n=2 Tax=Kytococcus sedentarius DSM 20547 RepID=C7NG21_KYTSD Length = 494 Score = 41.7 bits (96), Expect = 0.039, Method: Composition-based stats. Identities = 23/158 (14%), Positives = 40/158 (25%), Gaps = 9/158 (5%) Query: 167 SWWAVCNQVVDALPEAVSRRSLGLPAEKICSVYRESDIVPGELTATSILKQRTKNLAPLP 226 A + ++ L R+ L I T Sbjct: 279 CGLAGSSTLIVTLSAETLRQRLSCADPAGRRRGWGRGISELVDGGPDTCGSSTFGDVFTA 338 Query: 227 YAHQQQKSPQEKTVVSITVDPESPESFMKLPKRRRWVKEKYTRWVKTQPCA--CCGMPA- 283 +Q + + + D + R ++ V+ C C P Sbjct: 339 AELRQIACDADIAPMLLGTDSAPLDVGRTS--RAATPSQRALLAVRDGGCTFPGCDRPPS 396 Query: 284 -DDPHHLIGHGQGGMGTKAHDLFVLPLCRKHHNELHTD 320 HH++ GG + LC +HH +H D Sbjct: 397 WCHAHHVVHWADGG---PTDVDNLALLCVRHHRVVHRD 431 >UniRef50_Q5WE26 Putative uncharacterized protein n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WE26_BACSK Length = 153 Score = 40.9 bits (94), Expect = 0.061, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 23/62 (37%), Gaps = 5/62 (8%) Query: 275 PCACCGMPADDPHHLIGHGQGGMGTKAHDLFVLPLCRKHHNELHTDTVAFEDKYGSQLEL 334 CA G + HH GG GT + ++PL + H + HTD Y Q Sbjct: 58 GCAVTGQLTVEMHHAKFRSSGGRGTWRN---LVPLIQPLHRKCHTDRE--FADYWRQELE 112 Query: 335 IF 336 Sbjct: 113 KR 114 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P76162 Uncharacterized protein ydfU n=164 Tax=root RepI... 449 e-125 UniRef50_C4X6W4 Putative uncharacterized protein n=1 Tax=Klebsie... 421 e-116 UniRef50_B5QYR3 Phage protein n=42 Tax=root RepID=B5QYR3_SALEP 410 e-113 UniRef50_C8Q8J6 Putative uncharacterized protein n=3 Tax=root Re... 396 e-109 UniRef50_B4EVI5 Phage protein n=2 Tax=Proteus mirabilis RepID=B4... 393 e-108 UniRef50_A3MZM0 Putative uncharacterized protein n=1 Tax=Actinob... 364 3e-99 UniRef50_A7JUB6 Hypothetical bacteriophage protein n=3 Tax=Paste... 358 2e-97 UniRef50_A3EHV6 Putative uncharacterized protein n=1 Tax=Vibrio ... 342 1e-92 UniRef50_C4TVC0 Putative uncharacterized protein n=1 Tax=Yersini... 340 4e-92 UniRef50_A7MYK2 Putative uncharacterized protein n=2 Tax=Vibrio ... 317 3e-85 UniRef50_Q06262 Uncharacterized 36.0 kDa protein in doc-Gp10 int... 311 3e-83 UniRef50_C0B0V2 Putative uncharacterized protein n=2 Tax=Proteus... 297 5e-79 UniRef50_Q7ME22 Putative uncharacterized protein VVA0862 n=1 Tax... 296 8e-79 UniRef50_D2U458 Phage transcriptional regulator n=4 Tax=Enteroba... 151 4e-35 UniRef50_O63852 Mitochondrial DNA mismatch repair protein mutS h... 117 5e-25 UniRef50_A3X1N6 Putative uncharacterized protein n=1 Tax=Nitroba... 110 6e-23 UniRef50_Q0EWL6 Putative uncharacterized protein n=1 Tax=Maripro... 101 5e-20 UniRef50_D0IZ16 Putative uncharacterized protein n=1 Tax=Comamon... 94 7e-18 UniRef50_Q6V7S4 Bcep22gp20 n=3 Tax=root RepID=Q6V7S4_9CAUD 93 1e-17 UniRef50_B9L925 MutS-related protein n=1 Tax=Nautilia profundico... 91 6e-17 UniRef50_A1TN12 Putative uncharacterized protein n=3 Tax=Acidovo... 89 3e-16 UniRef50_A6Q2C2 DNA mismatch repair ATPase MutS n=1 Tax=Nitratir... 87 1e-15 UniRef50_A4W6Z4 Putative uncharacterized protein n=5 Tax=Proteob... 86 2e-15 UniRef50_Q30QK8 DNA mismatch repair protein MutS n=3 Tax=Epsilon... 85 4e-15 UniRef50_A6WVD9 Putative uncharacterized protein n=1 Tax=Ochroba... 83 1e-14 UniRef50_A1TMU5 Putative uncharacterized protein n=1 Tax=Acidovo... 83 2e-14 UniRef50_A6UAT1 Putative uncharacterized protein n=1 Tax=Sinorhi... 81 6e-14 UniRef50_B2U8H4 Putative uncharacterized protein n=1 Tax=Ralston... 81 6e-14 UniRef50_B7I7I6 Putative uncharacterized protein n=4 Tax=Acineto... 81 8e-14 UniRef50_B4BNF1 HNH nuclease n=3 Tax=Geobacillus RepID=B4BNF1_9BACI 80 9e-14 UniRef50_D1B043 DNA mismatch repair protein MutS domain protein ... 79 2e-13 UniRef50_A6M989 Putative uncharacterized protein n=1 Tax=Geobaci... 78 5e-13 UniRef50_A7MGK3 Putative uncharacterized protein n=7 Tax=Enterob... 76 2e-12 UniRef50_A0KJW9 Putative uncharacterized protein n=5 Tax=Gammapr... 73 1e-11 UniRef50_C7XUW3 Putative uncharacterized protein n=1 Tax=Lactoba... 72 3e-11 UniRef50_C6BBU0 Putative uncharacterized protein n=1 Tax=Ralston... 71 4e-11 UniRef50_C2EXV4 Putative uncharacterized protein n=3 Tax=Lactoba... 69 2e-10 UniRef50_A7ILD6 Putative uncharacterized protein n=2 Tax=Xanthob... 65 3e-09 UniRef50_Q2G3W4 Putative uncharacterized protein n=1 Tax=Novosph... 65 4e-09 UniRef50_C6JMX6 Predicted protein n=1 Tax=Fusobacterium varium A... 64 8e-09 UniRef50_C5A7R6 Putative uncharacterized protein n=1 Tax=Burkhol... 63 1e-08 UniRef50_B5W3B8 HNH endonuclease n=1 Tax=Arthrospira maxima CS-3... 63 2e-08 UniRef50_Q94Z00 Orf757 n=4 Tax=stramenopiles RepID=Q94Z00_PYLLI 63 2e-08 UniRef50_Q03VL2 Putative uncharacterized protein n=1 Tax=Leucono... 62 3e-08 UniRef50_Q2FUP5 Phi PV83 orf 19-like protein n=90 Tax=root RepID... 62 4e-08 UniRef50_B3XS05 Putative uncharacterized protein n=1 Tax=Lactoba... 61 5e-08 UniRef50_Q5VJ21 Putative uncharacterized protein n=1 Tax=Aeromon... 50 1e-04 Sequences not found previously or not previously below threshold: UniRef50_C8P906 Putative uncharacterized protein n=1 Tax=Lactoba... 59 2e-07 UniRef50_C5RA90 Putative uncharacterized protein n=1 Tax=Weissel... 59 3e-07 UniRef50_UPI0001BCECFE hypothetical protein SnoxA4_08445 n=1 Tax... 57 1e-06 UniRef50_C7CVU1 Predicted protein n=12 Tax=Enterococcus faecalis... 54 8e-06 UniRef50_B5QQ16 Putative uncharacterized protein n=1 Tax=Lactoba... 54 9e-06 UniRef50_Q03RB7 Putative uncharacterized protein n=1 Tax=Lactoba... 54 9e-06 UniRef50_O03913 Rorf242 protein n=7 Tax=root RepID=O03913_9CAUD 53 1e-05 UniRef50_UPI0001BC4E57 hypothetical protein F3_00857 n=1 Tax=Fus... 53 3e-05 UniRef50_D1AH86 Putative uncharacterized protein n=3 Tax=Fusobac... 52 3e-05 UniRef50_B1KZ53 Putative uncharacterized protein n=10 Tax=Clostr... 51 6e-05 UniRef50_C4WNE8 Putative uncharacterized protein n=1 Tax=Ochroba... 50 1e-04 UniRef50_D0LCK0 HNH endonuclease n=3 Tax=Gordonia bronchialis DS... 50 1e-04 UniRef50_C7QFC8 HNH endonuclease n=1 Tax=Catenulispora acidiphil... 49 3e-04 UniRef50_A6TRB8 Putative uncharacterized protein n=1 Tax=Alkalip... 49 3e-04 UniRef50_UPI0001BC4568 hypothetical protein FuD12_02539 n=1 Tax=... 48 4e-04 UniRef50_Q7WKA2 Putative uncharacterized protein n=2 Tax=Bordete... 48 4e-04 UniRef50_B0VK84 Putative uncharacterized protein 84 n=1 Tax=Azos... 48 7e-04 UniRef50_D2RPV1 Restriction endonuclease-like protein n=1 Tax=Ha... 47 0.001 UniRef50_Q8HQ89 ORF777 (Fragment) n=1 Tax=Schizosaccharomyces oc... 47 0.001 UniRef50_Q5UQU6 Putative DNA mismatch repair protein mutS homolo... 46 0.002 UniRef50_C4ZC63 Putative uncharacterized protein n=1 Tax=Eubacte... 46 0.002 UniRef50_Q44141 Anaredoxin n=1 Tax=Nostoc sp. PCC 7120 RepID=ANR... 46 0.002 UniRef50_B1N1A3 NicA n=1 Tax=Pseudomonas putida RepID=B1N1A3_PSEPU 46 0.002 UniRef50_C9RBS6 HNH endonuclease n=4 Tax=Ammonifex degensii KC4 ... 46 0.002 UniRef50_C0YLQ1 RNA-directed DNA polymerase n=40 Tax=Bacteria Re... 46 0.002 UniRef50_B9DZU4 Putative uncharacterized protein n=13 Tax=Clostr... 46 0.002 UniRef50_C3JKQ0 HNH endonuclease n=2 Tax=Rhodococcus erythropoli... 46 0.002 UniRef50_Q3IQ78 Probable HNH-type endonuclease n=1 Tax=Natronomo... 46 0.002 UniRef50_P35926 Recombination enhancement function protein n=5 T... 46 0.002 UniRef50_B0MFF1 Putative uncharacterized protein n=1 Tax=Anaeros... 46 0.002 UniRef50_D2CK02 Putative uncharacterized protein orf3 (Fragment)... 46 0.003 UniRef50_B6VWC0 Putative uncharacterized protein n=1 Tax=Bactero... 46 0.003 UniRef50_Q5WE26 Putative uncharacterized protein n=1 Tax=Bacillu... 46 0.003 UniRef50_B0I1N9 Reverse transcriptase homolog n=7 Tax=cellular o... 45 0.003 UniRef50_Q9G8T2 Orf762 n=2 Tax=Eukaryota RepID=Q9G8T2_RHDSA 45 0.004 UniRef50_Q3S275 ORF718 n=2 Tax=Eukaryota RepID=Q3S275_THAPS 45 0.004 UniRef50_A5V9C7 HNH endonuclease n=1 Tax=Sphingomonas wittichii ... 45 0.005 UniRef50_Q21AN9 HNH endonuclease n=1 Tax=Rhodopseudomonas palust... 45 0.005 UniRef50_C7XPL6 Predicted protein n=3 Tax=Fusobacterium RepID=C7... 45 0.005 UniRef50_B0I1N8 Reverse transcriptase homolog n=2 Tax=Pylaiella ... 44 0.005 UniRef50_B2ZY24 HNH endonuclease n=1 Tax=Ralstonia phage RSL1 Re... 44 0.005 UniRef50_Q892G1 Conserved protein n=1 Tax=Clostridium tetani Rep... 44 0.006 UniRef50_Q3ESS6 Reverse transcriptase / RNA maturase / Endonucle... 44 0.006 UniRef50_Q97K86 Putative uncharacterized protein n=1 Tax=Clostri... 44 0.007 UniRef50_Q92B13 Lin1740 protein n=4 Tax=root RepID=Q92B13_LISIN 44 0.007 UniRef50_Q312Y0 HNH nuclease n=1 Tax=Desulfovibrio desulfuricans... 44 0.009 UniRef50_Q1AV28 Adenine-specific DNA methylase containing a Zn-r... 44 0.009 UniRef50_A9BU78 HNH endonuclease n=4 Tax=Burkholderiales RepID=A... 44 0.012 UniRef50_C0ZFI2 Putative uncharacterized protein n=1 Tax=Breviba... 43 0.013 UniRef50_Q0S297 Putative uncharacterized protein n=1 Tax=Rhodoco... 43 0.013 UniRef50_D2PYV9 HNH endonuclease n=1 Tax=Kribbella flavida DSM 1... 43 0.016 UniRef50_C0N619 HNH endonuclease domain protein n=1 Tax=Methylop... 43 0.017 UniRef50_B9MNI0 HNH endonuclease n=2 Tax=Anaerocellum thermophil... 42 0.023 UniRef50_UPI0001C369A3 hypothetical protein ChatD1_02366 n=1 Tax... 42 0.027 UniRef50_C6P1I9 Putative uncharacterized protein n=1 Tax=Siderox... 42 0.027 UniRef50_Q7WLR3 Putative uncharacterized protein n=1 Tax=Bordete... 42 0.028 UniRef50_D1S1E3 HNH nuclease n=1 Tax=Micromonospora aurantiaca A... 42 0.032 UniRef50_D0YT08 Putative uncharacterized protein n=1 Tax=Mobilun... 42 0.036 UniRef50_A9AUN7 RNA-directed DNA polymerase n=4 Tax=Bacteria Rep... 42 0.043 UniRef50_C0WRI9 Possible HNH endonuclease n=1 Tax=Lactobacillus ... 41 0.058 UniRef50_A9WRB3 HNH endonuclease domain protein n=2 Tax=Renibact... 41 0.059 UniRef50_A8ZK69 Putative uncharacterized protein n=1 Tax=Acaryoc... 41 0.059 UniRef50_D2S1X8 HNH endonuclease n=1 Tax=Haloterrigena turkmenic... 41 0.085 UniRef50_Q7WGQ9 Putative uncharacterized protein n=1 Tax=Bordete... 41 0.093 UniRef50_C8X6A2 Putative uncharacterized protein n=1 Tax=Nakamur... 41 0.093 >UniRef50_P76162 Uncharacterized protein ydfU n=164 Tax=root RepID=YDFU_ECOLI Length = 349 Score = 449 bits (1154), Expect = e-125, Method: Composition-based stats. Identities = 349/349 (100%), Positives = 349/349 (100%) Query: 1 MRVLLRPVLVPELGLVVLKPGRESIQIFHNPRVLVEPEPKSMRNLPSGVVPAVRQPLAED 60 MRVLLRPVLVPELGLVVLKPGRESIQIFHNPRVLVEPEPKSMRNLPSGVVPAVRQPLAED Sbjct: 1 MRVLLRPVLVPELGLVVLKPGRESIQIFHNPRVLVEPEPKSMRNLPSGVVPAVRQPLAED 60 Query: 61 KTLLPFFSNERVIRAAGGVGALSDWLLRHVTSCQWPNGDYHHTETVIHRYGTGAMVLCWH 120 KTLLPFFSNERVIRAAGGVGALSDWLLRHVTSCQWPNGDYHHTETVIHRYGTGAMVLCWH Sbjct: 61 KTLLPFFSNERVIRAAGGVGALSDWLLRHVTSCQWPNGDYHHTETVIHRYGTGAMVLCWH 120 Query: 121 CDNQLRDQTSESLELLAQQNLTAWVIDVIRHAISGTQERELSLAELSWWAVCNQVVDALP 180 CDNQLRDQTSESLELLAQQNLTAWVIDVIRHAISGTQERELSLAELSWWAVCNQVVDALP Sbjct: 121 CDNQLRDQTSESLELLAQQNLTAWVIDVIRHAISGTQERELSLAELSWWAVCNQVVDALP 180 Query: 181 EAVSRRSLGLPAEKICSVYRESDIVPGELTATSILKQRTKNLAPLPYAHQQQKSPQEKTV 240 EAVSRRSLGLPAEKICSVYRESDIVPGELTATSILKQRTKNLAPLPYAHQQQKSPQEKTV Sbjct: 181 EAVSRRSLGLPAEKICSVYRESDIVPGELTATSILKQRTKNLAPLPYAHQQQKSPQEKTV 240 Query: 241 VSITVDPESPESFMKLPKRRRWVKEKYTRWVKTQPCACCGMPADDPHHLIGHGQGGMGTK 300 VSITVDPESPESFMKLPKRRRWVKEKYTRWVKTQPCACCGMPADDPHHLIGHGQGGMGTK Sbjct: 241 VSITVDPESPESFMKLPKRRRWVKEKYTRWVKTQPCACCGMPADDPHHLIGHGQGGMGTK 300 Query: 301 AHDLFVLPLCRKHHNELHTDTVAFEDKYGSQLELIFRFIDRALAIGVLA 349 AHDLFVLPLCRKHHNELHTDTVAFEDKYGSQLELIFRFIDRALAIGVLA Sbjct: 301 AHDLFVLPLCRKHHNELHTDTVAFEDKYGSQLELIFRFIDRALAIGVLA 349 >UniRef50_C4X6W4 Putative uncharacterized protein n=1 Tax=Klebsiella pneumoniae NTUH-K2044 RepID=C4X6W4_KLEPN Length = 354 Score = 421 bits (1082), Expect = e-116, Method: Composition-based stats. Identities = 178/350 (50%), Positives = 243/350 (69%), Gaps = 3/350 (0%) Query: 1 MRVLLRPVLVPELGLVVLKPGRESIQIFHNPRVLVEPEPKSMRNLPSGVVPAVRQPLAED 60 +R LL P +VP LG+V+ KPG+E + +F RVL+ P+P+ M P+G VP RQPL+ D Sbjct: 3 LRGLLTPEIVPRLGVVLFKPGKELMSLFAQGRVLITPQPEYMAGFPTGKVPDARQPLSVD 62 Query: 61 KTLLPFFSNERVIRAAGGVGALSDWLLRHVTSCQWPNGDYHHTETVIHRYGTGAMVLCWH 120 ++L+PFF++ RVI AAGG+ L WL V CQ + YHH ETVI R G+++LCWH Sbjct: 63 RSLVPFFTDPRVITAAGGIEGLERWLSLSVRQCQNHDEGYHHIETVILRQDPGSVLLCWH 122 Query: 121 CDNQLRDQTSESLELLAQQNLTAWVIDVIRHAISGTQERELSLAELSWWAVCNQVVDALP 180 CDN+LRD+ +++ +A +N+ WVID++ ++ T+ER LSLAEL WWAV + + DA+ Sbjct: 123 CDNKLRDEPDPAIKEIASRNVIDWVIDMVLLSLGCTRERTLSLAELCWWAVQSGISDAIT 182 Query: 181 EAVSRRSLGLPAEKICSVYRESDIVPGELTATSILKQRTKNLAPLPYAHQQQKSPQEK-- 238 EA++ ++L + E SVYR+SDI+P + A ILK+R Q+ Sbjct: 183 EAMAEKALRIAPEPHRSVYRDSDIIPA-IPAADILKRRLDKRESHAITGGLVTGDQDAGR 241 Query: 239 TVVSITVDPESPESFMKLPKRRRWVKEKYTRWVKTQPCACCGMPADDPHHLIGHGQGGMG 298 ++ + VDP+ PE+FM PKRRRW+ +YT+WVKTQ CACC PADDPHH+IGHG GG Sbjct: 242 PILRLGVDPDCPEAFMLRPKRRRWICPQYTQWVKTQECACCRQPADDPHHIIGHGMGGTA 301 Query: 299 TKAHDLFVLPLCRKHHNELHTDTVAFEDKYGSQLELIFRFIDRALAIGVL 348 TKAHDLFV+PLCR HH+ELH + +AFE+KYGSQLEL+ RF+DRAL IGV+ Sbjct: 302 TKAHDLFVIPLCRAHHDELHANLIAFEEKYGSQLELLIRFLDRALGIGVI 351 >UniRef50_B5QYR3 Phage protein n=42 Tax=root RepID=B5QYR3_SALEP Length = 329 Score = 410 bits (1054), Expect = e-113, Method: Composition-based stats. Identities = 188/349 (53%), Positives = 236/349 (67%), Gaps = 20/349 (5%) Query: 1 MRVLLRPVLVPELGLVVLKPGRESIQIFHNPRVLVEPEPKSMRNLPSGVVPAVRQPLAED 60 MR LL P + P +G+V+ +PG E + +F RVL+EPEP+ + G VPAV QPLA+D Sbjct: 1 MRALLTPEIAPRMGVVLFRPGSELMPLFMQGRVLLEPEPEQYSSFACGAVPAVSQPLADD 60 Query: 61 KTLLPFFSNERVIRAAGGVGALSDWLLRHVTSCQWPNGDYHHTETVIHRYGTGAMVLCWH 120 + F NE VI AGG+ +L WLLR CQWP+ +H + R+ GA+ LCWH Sbjct: 61 PAVRDVFRNESVIYRAGGLDSLESWLLRG-NGCQWPHSVWHSEQMTTMRHAPGAIRLCWH 119 Query: 121 CDNQLRDQTSESLELLAQQNLTAWVIDVIRHAISGTQERELSLAELSWWAVCNQVVDALP 180 CDN LR+Q +E LE +A +N T WV+ V+ + ++L EL WW V N + + LP Sbjct: 120 CDNLLREQFTERLESIAVENTTKWVLSVVCRDLGFDDMHAVTLPELCWWMVRNDLAEVLP 179 Query: 181 EAVSRRSLGLPAEKICSVYRESDIVPGELTATSILKQRTKNLAPLPYAHQQQKSPQEKTV 240 E+ +R++L +P + S RES+IVP + ATSI++ + K V Sbjct: 180 ESAARKALRMPKAIVQSATRESEIVPS-VPATSIVQDK------------------AKKV 220 Query: 241 VSITVDPESPESFMKLPKRRRWVKEKYTRWVKTQPCACCGMPADDPHHLIGHGQGGMGTK 300 +++ VDPESPESFM PKRRRW+ E+YTRWVK+QPCACCG ADDPHHL GHGQGGMGTK Sbjct: 221 LALRVDPESPESFMLRPKRRRWINERYTRWVKSQPCACCGKQADDPHHLTGHGQGGMGTK 280 Query: 301 AHDLFVLPLCRKHHNELHTDTVAFEDKYGSQLELIFRFIDRALAIGVLA 349 AHDLFVLPLCR HHNELH DTVAFE+KYGSQLELIFRFIDRALAIGVLA Sbjct: 281 AHDLFVLPLCRTHHNELHADTVAFEEKYGSQLELIFRFIDRALAIGVLA 329 >UniRef50_C8Q8J6 Putative uncharacterized protein n=3 Tax=root RepID=C8Q8J6_9ENTR Length = 338 Score = 396 bits (1018), Expect = e-109, Method: Composition-based stats. Identities = 164/352 (46%), Positives = 216/352 (61%), Gaps = 21/352 (5%) Query: 1 MRVLLRPVLVPELGLVVLKPGRESIQIFHNPRVLVEPEPKSMRNLPSGVVPAVRQPLAED 60 MR LL P LVP +G+V+ KPG++ +F RVL+ M +LPSG++ QPL ++ Sbjct: 1 MRALLTPELVPRIGVVLFKPGKDLHSLFR-GRVLISTPTSEMADLPSGLINDSSQPLLDE 59 Query: 61 KTLLPFFSNERVIRAAGGVGALSDWLLRHVTSCQW-PNGDYHHTETVIHRYGTGAMVLCW 119 K+L FF + RVIRAAGG A W+ + + +CQ YHH R +G + LC+ Sbjct: 60 KSLAVFFQDGRVIRAAGGWEAHDAWVQK-INACQLQKKDSYHHPHYTTLRTESGTVCLCY 118 Query: 120 HCDNQLR-DQTSESLELLAQQNLTAWVIDVIRHAISGTQERELSLAELSWWAVCNQVVDA 178 H DN R + LE +A N+ W+I+ + + ++L EL WWA N V D Sbjct: 119 HDDNSARLNGLPAQLEEVATGNMARWIIESACVHMGLGSDHRMTLPELCWWACLNDVTDL 178 Query: 179 LPEAVSRRSLGLPAEKIC-SVYRESDIVPGELTATSILKQRTKNLAPLPYAHQQQKSPQE 237 +PEA +RR L +PAEK +ES I P Q+ + Sbjct: 179 IPEAPARRVLRMPAEKPATGELKESRIQP----------------ERAAREVIQEAAEVV 222 Query: 238 KTVVSITVDPESPESFMKLPKRRRWVKEKYTRWVKTQPCACCGMPADDPHHLIGHGQGGM 297 K V+++ +DPESPESFMK PKRRR EKYTRWVK QPCACC PADDPHH+IG+GQGGM Sbjct: 223 KAVINLAIDPESPESFMKRPKRRRLENEKYTRWVKAQPCACCNKPADDPHHIIGYGQGGM 282 Query: 298 GTKAHDLFVLPLCRKHHNELHTDTVAFEDKYGSQLELIFRFIDRALAIGVLA 349 GTKAHDLFV+PLCR HH+ELH D VAFE+KYGSQ+EL+FRF+D ++A+GV+ Sbjct: 283 GTKAHDLFVIPLCRAHHDELHRDPVAFENKYGSQIELLFRFLDHSIAVGVIG 334 >UniRef50_B4EVI5 Phage protein n=2 Tax=Proteus mirabilis RepID=B4EVI5_PROMH Length = 341 Score = 393 bits (1009), Expect = e-108, Method: Composition-based stats. Identities = 142/355 (40%), Positives = 219/355 (61%), Gaps = 22/355 (6%) Query: 1 MRVLLRPVLVPELGLVVLKPGRESIQIFH-NPRVLVEPEPKSMRNLPSGVVPAVRQPLAE 59 M++LL P + +LG+V+LKPG E ++ F + RV++ PKS+ PSG + QPL + Sbjct: 1 MKLLLTPYIQSDLGVVLLKPGAELLKQFKPHSRVIISDVPKSLDKWPSGALTGNEQPLLD 60 Query: 60 DKTLLPFFSNERVIRAAGGVGALSDWLLRHVTSCQWPN--GDYHHTETVIHRYGTGAMVL 117 +K ++ F +N++V++A GG+ +++ W+ R++ CQ + YHH E + G + Sbjct: 61 NKGIVDFLNNKKVLQAMGGLSSMNMWIGRNIHCCQINDKHDSYHHHELTTTWHKDGVIRT 120 Query: 118 CWHCDNQLRDQTSESLELLAQQNLTAWVIDVIRHAISGTQERELSLAELSWWAVCNQVVD 177 CW+ DN +R ++E + LA +N AW++D IR + L++ + +AV +++VD Sbjct: 121 CWYHDNHIRHSSAEWVAELAHKNRIAWMVDTIRSRLRLDDSHSLTIPDFFAFAVMHKLVD 180 Query: 178 ALPEAVSRRSLGLPAE----KICSVYRESDIVPGELTATSILKQRTKNLAPLPYAHQQQK 233 LP+A+ RR L P + ++ + E+DIVP E+TA S + R + Sbjct: 181 KLPDAILRRILNWPDKTKDRRVHGGFPEADIVPNEVTALSAMNARLDAI----------- 229 Query: 234 SPQEKTVVSITVDPESPESFMKLPKRRRWVKEKYTRWVKTQPCACCGMPADDPHHLIGHG 293 K V+++TVDPE P SF+ PK RW ++ +WVKTQPC CG ADDPHH+IGHG Sbjct: 230 ----KPVINVTVDPEPPASFLLKPKMCRWENTQWLQWVKTQPCCVCGQQADDPHHIIGHG 285 Query: 294 QGGMGTKAHDLFVLPLCRKHHNELHTDTVAFEDKYGSQLELIFRFIDRALAIGVL 348 GGMGTKAHDLF +PLCR+HH+ELH D +E YG+Q+EL+F F++R+L +G L Sbjct: 286 MGGMGTKAHDLFTIPLCRQHHDELHHDPKLWEATYGNQIELLFSFLNRSLGMGAL 340 >UniRef50_A3MZM0 Putative uncharacterized protein n=1 Tax=Actinobacillus pleuropneumoniae L20 RepID=A3MZM0_ACTP2 Length = 340 Score = 364 bits (934), Expect = 3e-99, Method: Composition-based stats. Identities = 123/351 (35%), Positives = 179/351 (50%), Gaps = 23/351 (6%) Query: 3 VLLRPVLVPELGLVVLKPGRESIQIFHNPRVLVEPEPKSMRNLPSGVVPAVR--QPLAED 60 +LL+P E G+V + ++ R ++ P S++ PSG + + Q Sbjct: 5 LLLKPYFQTEAGIVFYRIPPTVNKLAFGERTILMPATDSLKTQPSGKIGVAKNLQNSTAC 64 Query: 61 KTLLPFFSNERVIRAAGGVGALSDWLLRHVTSCQWPNGDYHHTETVIHRYGTGAMVLCWH 120 L F +E V +AAGG LS W+ R + CQ +G Y H E + R TG + CWH Sbjct: 65 PQLADFTKSELVRKAAGGEAELSKWV-RKIAICQCRDGAYCHKEMTVTRTATGFIRTCWH 123 Query: 121 CDN--QLRDQTSESLELLAQQNLTAWVIDVIRHAISGTQERELSLAELSWWAVCNQVVDA 178 D + + E L LA+ N ++ IR + + L+L L WA+ V A Sbjct: 124 HDGIAHRGEASEEELNALAEANWVQFIGYKIRQDLQMQADESLNLGCLLAWAIAKNCVSA 183 Query: 179 LPEAVSRRSLGLPAEKICSVYRESDIVPGELTATSILKQRTKNLAPLPYAHQQQKSPQEK 238 + E+ RR L LP +++ +RES E + + Sbjct: 184 IDESDLRRLLNLPQKEVPD-HRESTTYAAEQADPHKIF-----------------KTLAQ 225 Query: 239 TVVSITVDPESPESFMKLPKRRRWVKEKYTRWVKTQPCACCGMPADDPHHLIGHGQGGMG 298 ++ + DPE P SFM PK +R+ K+ ++VK+QPC CCG ADDPHH+IG G+G MG Sbjct: 226 PILKLKADPEPPASFMAKPKEKRFESSKWLQFVKSQPCVCCGKRADDPHHIIGQGRGKMG 285 Query: 299 TKAHDLFVLPLCRKHHNELHTDTVAFEDKYGSQLELIFRFIDRALAIGVLA 349 +K HDLFV+PLCR HHNELH + FE YG Q +L+FRF+DRAL++ L+ Sbjct: 286 SKEHDLFVIPLCRVHHNELHCNAQLFEQNYGKQTDLLFRFLDRALSLEALS 336 >UniRef50_A7JUB6 Hypothetical bacteriophage protein n=3 Tax=Pasteurellaceae RepID=A7JUB6_PASHA Length = 342 Score = 358 bits (919), Expect = 2e-97, Method: Composition-based stats. Identities = 119/353 (33%), Positives = 171/353 (48%), Gaps = 26/353 (7%) Query: 3 VLLRPVLVPELGLVVLKPGRESIQIFHNPRVLVEPEPKSMRNLPSGVVPAVRQPLAEDKT 62 +LL P E+G+V K ++ R L++P P + + SG V K Sbjct: 5 LLLTPYFQTEVGIVFYKVPKDVSPAAFGERTLLQPAPTDLATVKSGKVANFSANSTACKE 64 Query: 63 LLPFFSNERVIRAAGGVGALSDWL-----LRHVTSCQWPNGDYHHTETVIHRYGTGAMVL 117 L F + +V A S+ L ++ + Q +G Y H E V GA+ L Sbjct: 65 LAEFAKSAKVRSALNQRDKYSNDLPYTRFVKSIQKYQCRDGKYCHPEKVFVENEKGAVQL 124 Query: 118 CWHCDNQLRDQ--TSESLELLAQQNLTAWVIDVIRHAISGTQERELSLAELSWWAVCNQV 175 CW+ D D +E LE LA +N ++ IR + TQ + A+L +A + Sbjct: 125 CWYHDKMRMDGEIPNEKLEALADENWEKFIAQQIRLTLRKTQSSAIEFADLVLFASIKGL 184 Query: 176 VDALPEAVSRRSLGLPAEKICSVYRESDIVPGELTATSILKQRTKNLAPLPYAHQQQKSP 235 +D L ++ LG P V +ES+I +P A K Sbjct: 185 LDELDSNALQQFLGYPPLNNSGVSKESNI----------------GFDDVPNARANLKKW 228 Query: 236 QEKTVVSITVDPESPESFMKLPKRRRWVKEKYTRWVKTQPCACCGMPADDPHHLIGHGQG 295 E + + V+PE +FM PK +R+ K+ ++VK QPC CCG ADDPHH+IG+G G Sbjct: 229 AE--TLKLKVEPEPLAAFMAKPKLQRFEWRKWLQFVKAQPCMCCGQQADDPHHIIGYG-G 285 Query: 296 GMGTKAHDLFVLPLCRKHHNELHTDTVAFEDKYGSQLELIFRFIDRALAIGVL 348 MG+K HDLF LPLCR HH+ELH + FE YGSQLEL+ +F+DRA+ +G L Sbjct: 286 AMGSKQHDLFTLPLCRIHHDELHRNVGKFEQDYGSQLELLIKFLDRAIGLGAL 338 >UniRef50_A3EHV6 Putative uncharacterized protein n=1 Tax=Vibrio cholerae V51 RepID=A3EHV6_VIBCH Length = 342 Score = 342 bits (876), Expect = 1e-92, Method: Composition-based stats. Identities = 108/364 (29%), Positives = 171/364 (46%), Gaps = 40/364 (10%) Query: 3 VLLRPVLVPELGLVVLKPGRESI----QIFHNPRVLVEPEPKSMRNLPSGVVPAVRQPLA 58 ++L+P L P+LG+V+ KPG+ + ++ R+++ P P + +PSG + + Sbjct: 2 LVLQPFLQPDLGIVMFKPGKTLLTELVKMSQGNRLVLMPLPDELVTVPSGKLNKPILSSS 61 Query: 59 E------------DKTLLPFFSNERVIRAAGGVGALSDWLLRHVTSCQWPNGDYHHTETV 106 + D L+ FF +E V R G L W+ + CQ +G+Y Sbjct: 62 DNQEDHLLDGCLLDGCLIDFFLDEEVQRRLSG---LKHWV-ELIPHCQLSDGEYCDKNLT 117 Query: 107 IHRYGTGAMVLCWHCDNQLRDQTSESLELLAQQNLTAWVIDVIRHAISGTQERELSLAEL 166 G + CWH DNQ R + S + +A++N+ W + I + R+ SL EL Sbjct: 118 TLSTDKGMVKCCWHHDNQERREPSIHAKQVAEKNVILWAEERISANLKL--NRKPSLHEL 175 Query: 167 SWWAVCNQVVDALPEAVSRRSLGLPAEKICSVYRESDIVPGELTATSILKQRTKNLAPLP 226 WW V N + + LP+ + ++LG+ E+ Y + Sbjct: 176 CWWTVLNGLYEKLPQVIVEKALGIRQEQKADQYM-----------------VKMDRDDRL 218 Query: 227 YAHQQQKSPQEKTVVSITVDPESPESFMKLPKRRRWVKEKYTRWVKTQPCACCGMPAD-D 285 + QQ + + +TVD E P FM PK + W EKY ++V++ PC G D Sbjct: 219 FFDAQQSLNSRVSAIELTVDDEPPAMFMARPKEKTWHSEKYLKFVRSLPCVITGKTTDVV 278 Query: 286 PHHLIGHGQGGMGTKAHDLFVLPLCRKHHNELHTDTVAFEDKYGSQLELIFRFIDRALAI 345 HHLIGHG+G M K+HDLF +P+ H + H D A+E K+GSQL + + I +AL + Sbjct: 279 AHHLIGHGEGKMAGKSHDLFTIPIHTDEHRKFHDDPKAWEAKHGSQLFYVKQTIKKALDL 338 Query: 346 GVLA 349 G L Sbjct: 339 GALT 342 >UniRef50_C4TVC0 Putative uncharacterized protein n=1 Tax=Yersinia kristensenii ATCC 33638 RepID=C4TVC0_YERKR Length = 321 Score = 340 bits (872), Expect = 4e-92, Method: Composition-based stats. Identities = 144/339 (42%), Positives = 198/339 (58%), Gaps = 22/339 (6%) Query: 15 LVVLKPGRESIQIFHNPRVLVEPEPKSMRNLPSGVVPAVRQPLAEDKTLLPFFSNERVIR 74 +V+LKPG + + + + R+LV EP+ ++LPSG +P Q LA D LLPFF +ERVI Sbjct: 1 MVILKPGVDLLP-YMSGRLLVATEPEEFKSLPSGALPVAIQQLANDPRLLPFFEHERVIN 59 Query: 75 AAGGVGALSDWLLRHVTSCQWPNGDYHH-TETVIHRYGTGAMVLCWHCDNQLRDQTSESL 133 AAGG L+ W+ + + CQW + D H YG ++ LCWH DN+LR+ T L Sbjct: 60 AAGGHRLLATWV-KQLKECQWHDPDDTHVQNLTTLSYGQRSIRLCWHHDNKLREHTLPRL 118 Query: 134 ELLAQQNLTAWVIDVIRHAISGTQERELSLAELSWWAVCNQVVDALPEAVSRRSLGL-PA 192 E LA NL +W+I I + +L++ EL WWAV N+V D LP++++R SL + PA Sbjct: 119 EQLATSNLISWIISTICSHFRLPEGHQLTMPELCWWAVVNEVSDQLPDSIARASLRMLPA 178 Query: 193 EKICSVYRESDIVPGELTATSILKQRTKNLAPLPYAHQQQKSPQEKTVVSITVDPESPES 252 RESDI P P + K Q K V+++ +D E P S Sbjct: 179 VMKSGPTRESDI----------------TWTPNPTQIIENKVEQVKKVLALKIDDEPPAS 222 Query: 253 FMKLPKRRRWVKEKYTRWVKTQPCACCGMPADDP--HHLIGHGQGGMGTKAHDLFVLPLC 310 FM++PKR RW K+ +WVK+Q C CG ADDP G GQGGMGTKAHDLF +PLC Sbjct: 223 FMRIPKRYRWESAKWLKWVKSQQCCGCGSSADDPHHIIGHGQGQGGMGTKAHDLFTIPLC 282 Query: 311 RKHHNELHTDTVAFEDKYGSQLELIFRFIDRALAIGVLA 349 R H+ LH D +E ++GSQ+ L F F+DR+++IG +A Sbjct: 283 RLCHDALHADMHTWEAEHGSQVVLWFHFMDRSISIGAMA 321 >UniRef50_A7MYK2 Putative uncharacterized protein n=2 Tax=Vibrio harveyi group RepID=A7MYK2_VIBHB Length = 323 Score = 317 bits (813), Expect = 3e-85, Method: Composition-based stats. Identities = 99/345 (28%), Positives = 158/345 (45%), Gaps = 33/345 (9%) Query: 9 LVPEL--GLVVLKPGRESI-QIFHNPRV-LVEPEPKSMRNLPSGVVPAVRQPLAEDKTLL 64 +VP L ++ L P +S+ + + ++ LV P + G+ ++D +L+ Sbjct: 8 IVPTLNAAVIALTPNTQSLTSLLVDGKIGLVSPNQRLATKTAGGL-------SSDDSSLV 60 Query: 65 PFFSNERVIRAAGGVGALSDWLLRHVTSCQWPNGDYHHTETVIHRYGTGAMVLCWHCDNQ 124 FF++E V G D ++ CQ + Y + G GA+ LCWH DN Sbjct: 61 AFFAHENVQLLIGSTVKYVD----TISECQLKDEGYCNHNLKTRVTGEGAIRLCWHHDNM 116 Query: 125 LRDQTSESLELLAQQNLTAWVIDVIRHAISGTQERELSLAELSWWAVCNQVVDALPEAVS 184 D S +A++N + V+ + ++ R ++ +L WWAV N V + LP++V Sbjct: 117 ADD--SHQAYSIARKNTVRHGLMVVSRQLH-SEVRRITGVDLCWWAVRNDVYELLPQSVI 173 Query: 185 RRSLGLPAEKICSVYRESDIVPGELTATSILKQRTKNLAPLPYAHQQQKSPQEKTVVSIT 244 R A + T + Q + K V+ + Sbjct: 174 ERQFKREATVKRVGVK--------------GNIDTDARYMVESQRAQLERLA-KPVLKLV 218 Query: 245 VDPESPESFMKLPKRRRWVKEKYTRWVKTQPCACCGMPADDPHHLIGHGQGGMGTKAHDL 304 +D + P +++ PK RW EKY +V+ PC CG A HHLIGHG+G MG+KA D+ Sbjct: 219 IDDDPPAMYLRKPKPIRWESEKYLSFVRKLPCRVCGKTAGIAHHLIGHGEGKMGSKASDM 278 Query: 305 FVLPLCRKHHNELHTDTVAFEDKYGSQLELIFRFIDRALAIGVLA 349 F PLC +HH ELH D +E ++G QL + I+RAL +G + Sbjct: 279 FTFPLCNEHHQELHRDMNTWERQHGDQLWHVKETINRALVVGAVG 323 >UniRef50_Q06262 Uncharacterized 36.0 kDa protein in doc-Gp10 intergenic region n=4 Tax=root RepID=YORA_BPP1 Length = 312 Score = 311 bits (796), Expect = 3e-83, Method: Composition-based stats. Identities = 83/318 (26%), Positives = 144/318 (45%), Gaps = 16/318 (5%) Query: 35 VEPEPKSM-RNLPSGVVPAVRQPLAEDKTLLPFFSNERVIRAAGGVGALSDWLLRHVTSC 93 +EP P+ + ++ G+V Q +A ++ L PFF+++ + R GG+ AL WL R C Sbjct: 1 MEPVPRELIEHMEDGLV-VTEQTMATNEALQPFFNSDELFRRIGGIDALVAWLRRKEGQC 59 Query: 94 QWPNGDYHHTETVIHRYGTGAMVLCWHCDNQLRDQTSESLELLAQQNLTAWVIDVIRHAI 153 Q + + V A++LCWH DN R + L+ N W++DV R + Sbjct: 60 QAADRSWCDNHIVHAERDNSAVLLCWHHDNHYRMRGFNELKETLHNNRVNWILDVARQEM 119 Query: 154 SGTQERELSLAELSWWAVCNQVVDALPEAVSRRSLG--LPAEKICSVYRESDIVPGELTA 211 + +LS+ EL WWA ++ +PE V R S+ + +E+DI P + A Sbjct: 120 GLSNSHDLSIQELCWWAFMRNMMHLMPEEVCRISINKMKATPQDSGPLKEADIRPYDDRA 179 Query: 212 TSILKQRTKNLAPLPYAHQQQKSPQEKTVVSITVDPESPESFMKLPKRRRWVKEKYTRWV 271 T+ ++ ++ +P V + VD + + K+PK + +Y +V Sbjct: 180 TAYVQMME-----------ERSAPMRAKVCPVDVDSDPGMAHFKIPKLQSLKLPEYMDFV 228 Query: 272 KTQPCACCGMPADDPHHLIGHGQGGMGTKAHDLFVLPLCRKHHNELHTDTVAFEDKYGSQ 331 ++PC CG H+ + AHD++ +PLC+ ++ D +E +G Sbjct: 229 ASRPCCGCGAAGRGA-HITPYIVRHSRLCAHDIYAIPLCQSCQRDIERDRYNWEKTHGRL 287 Query: 332 LELIFRFIDRALAIGVLA 349 F D AL +GV+ Sbjct: 288 AMHQRLFFDYALGVGVIT 305 >UniRef50_C0B0V2 Putative uncharacterized protein n=2 Tax=Proteus penneri ATCC 35198 RepID=C0B0V2_9ENTR Length = 331 Score = 297 bits (759), Expect = 5e-79, Method: Composition-based stats. Identities = 85/268 (31%), Positives = 145/268 (54%), Gaps = 22/268 (8%) Query: 1 MRVLLRPVLVPELGLVVLKPGRESI-QIFHNPRVLVEPEPKSMRNLPSGVVPAVRQPLAE 59 M++LL P + +LG+V+LKP E + Q+ + RV++ PKS+ PSG + QPL Sbjct: 1 MKLLLTPYIQSDLGVVLLKPEAELLEQLKQHSRVIISDVPKSLNKWPSGALTGNEQPLLN 60 Query: 60 DKTLLPFFSNERVIRAAGGVGALSDWLLRHVTSCQWPN--GDYHHTETVIHRYGTGAMVL 117 +K ++ F +NE+VI+A GG+ +++ W+ R++ CQ + YHH E + G + Sbjct: 61 NKDIIDFLNNEKVIQAIGGLASMNMWIGRNIHCCQINDENDSYHHHELTTTWHKDGVIRT 120 Query: 118 CWHCDNQLRDQTSESLELLAQQNLTAWVIDVIRHAISGTQERELSLAELSWWAVCNQVVD 177 CW+ DN +R ++ + LA +N AW+ID IR + L++ + +AV +++VD Sbjct: 121 CWYHDNHIRHSSAGWVAELAYKNRIAWMIDTIRSRLRLDDSHSLTIPDFFAFAVMHKLVD 180 Query: 178 ALPEAVSRRSLGLPAE----KICSVYRESDIVPGELTATSILKQRTKNLAPLPYAHQQQK 233 LP+A+ RR L P + ++ + E+D VP ++ A S + R + Sbjct: 181 KLPDAILRRILNWPDKTKERRVHGGFPEADFVPNKVPALSAMNARLDAI----------- 229 Query: 234 SPQEKTVVSITVDPESPESFMKLPKRRR 261 K ++++TVDPE P SF+ PK Sbjct: 230 ----KHLINVTVDPEPPASFLLKPKNAP 253 >UniRef50_Q7ME22 Putative uncharacterized protein VVA0862 n=1 Tax=Vibrio vulnificus YJ016 RepID=Q7ME22_VIBVY Length = 348 Score = 296 bits (758), Expect = 8e-79, Method: Composition-based stats. Identities = 96/365 (26%), Positives = 156/365 (42%), Gaps = 55/365 (15%) Query: 8 VLVPELGLVVLKPG-RESIQIFHNPRVLVEPEPKSMRNLPSG--------VVPAVRQPLA 58 + +P+LG+ +L G S+ + R L++P P S+ + G ++ + ++ + Sbjct: 16 IPIPQLGITLLNTGDHTSLMQDLDGRALIQPVPLSLIHRSDGPVVVDAVTLIASEKETVR 75 Query: 59 EDKTLLPFFSNERVIRAAGGVGALSDWLLRHVTSCQWPNGDYHHTETVIHRYGTGAMVLC 118 D +LLPFF++ V + + D + CQ + +H + GA+ LC Sbjct: 76 RDLSLLPFFAHPDVDKLFDPIEKHVD----RIPRCQAKSEHCNHNLLTVKLENGGAIRLC 131 Query: 119 WHCDNQLRDQTSESLELLAQQNLTAWVIDVIRHAISGTQERELSLAELSWWAVCNQVVDA 178 WH D L + ++ A NL + +V+ + G+ L++ EL WWAV N+V A Sbjct: 132 WHHD--LHREEVVGIDSKAATNLIVFRSNVVSVRLHGS-VLPLTMPELCWWAVRNKVYHA 188 Query: 179 LP----------EAVSRRSLGLPAEKICSVYRESDIVPGELTATSILKQRTKNLAPLPYA 228 LP E RR G + Y + D Sbjct: 189 LPHDLLSKIFEEEKTRRRVGGRGYIDTNARYIQQDSR----------------------- 225 Query: 229 HQQQKSPQEKTVVSITVDPESPESFMKLPKRRRWVKEKYTRWVKTQPCACCG----MPAD 284 + K V+ ++VD + P +M+ PK + E Y +V+ PC G Sbjct: 226 --EVLENLAKPVLKLSVDEDPPLLYMRKPKPTTYTSEAYLAFVRKLPCVVNGPGTERDPV 283 Query: 285 DPHHLIGHGQGGMGTKAHDLFVLPLCRKHHNELHTDTVAFEDKYGSQLELIFRFIDRALA 344 HHLI HG+G MG KAHDLF PL H + H D +E K+G+QL + + +AL Sbjct: 284 VAHHLILHGEGKMGGKAHDLFTFPLRASEHRKFHNDPAGWEAKHGTQLLHVKNTLRKALD 343 Query: 345 IGVLA 349 +G + Sbjct: 344 VGAIG 348 >UniRef50_D2U458 Phage transcriptional regulator n=4 Tax=Enterobacteriaceae RepID=D2U458_9ENTR Length = 164 Score = 151 bits (381), Expect = 4e-35, Method: Composition-based stats. Identities = 66/146 (45%), Positives = 90/146 (61%) Query: 204 IVPGELTATSILKQRTKNLAPLPYAHQQQKSPQEKTVVSITVDPESPESFMKLPKRRRWV 263 PG + AP + + E+ V+++ +D P S MK+ K +RW Sbjct: 19 FKPGINQLHHFSGRMIVMSAPDELSDAKAGRIAEQAVLNLVIDANPPASLMKIQKLKRWG 78 Query: 264 KEKYTRWVKTQPCACCGMPADDPHHLIGHGQGGMGTKAHDLFVLPLCRKHHNELHTDTVA 323 +KY +WVK++PC C PADD HHLIG+G GG+G KAHDLF +PLCR HH+ELH D A Sbjct: 79 NQKYLQWVKSRPCCLCQKPADDAHHLIGYGYGGIGVKAHDLFSIPLCRGHHSELHHDPKA 138 Query: 324 FEDKYGSQLELIFRFIDRALAIGVLA 349 +E KYGSQL L+F F+D +L +G L+ Sbjct: 139 WEVKYGSQLALLFGFLDESLGLGALS 164 Score = 123 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 31/138 (22%), Positives = 53/138 (38%), Gaps = 12/138 (8%) Query: 4 LLRPVLVPELGLVVLKPGRESIQIFHNPRVLVEPEPKSMRNLPSGVVP--AVRQPLAEDK 61 LL + VPELG+V KPG + F + R++V P + + +G + AV + + Sbjct: 5 LLTAIPVPELGIVAFKPGINQLHHF-SGRMIVMSAPDELSDAKAGRIAEQAVLNLVIDAN 63 Query: 62 TLLPFFSNERVIRAAGGVGALSDWL-LRHVTSCQWPNGDYHH------TETVIHRYGTGA 114 +++ R G W+ R CQ P D HH + + + Sbjct: 64 PPASLMKIQKLKRW--GNQKYLQWVKSRPCCLCQKPADDAHHLIGYGYGGIGVKAHDLFS 121 Query: 115 MVLCWHCDNQLRDQTSES 132 + LC ++L Sbjct: 122 IPLCRGHHSELHHDPKAW 139 >UniRef50_O63852 Mitochondrial DNA mismatch repair protein mutS homolog n=428 Tax=Octocorallia RepID=MSHM_SARGL Length = 982 Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats. Identities = 24/162 (14%), Positives = 54/162 (33%), Gaps = 17/162 (10%) Query: 172 CNQVVDALPEAVSRRSLGLPAEKICSVYRESDIVPGELTATSILKQRTKNLAPLPYAHQQ 231 +QV + V L + ++ ++ E + PG + ++ + + Sbjct: 812 LHQVCSLIDSPVRYYHLSVIQQENSALIYERKLKPGPGPSQYGIEVMGHIINDKKFY--- 868 Query: 232 QKSPQEKTVVSITVDPESPESFMKLPKRRRWVKEKYTRWVKTQPCACCGMPADDPHHLIG 291 ++ E P + KY V C CG PAD HH+ Sbjct: 869 ----NSALKYRKLINWEPPSQGELTV----FRPSKYNAQVFIDSCEICGAPADAVHHIKP 920 Query: 292 H-GQGGMGTKAHDLF--VLPLCRKHHNELHTDTVA---FEDK 327 + + + ++P+C H ++H + ++ ++ Sbjct: 921 KSEHKKLCNRKLNRRSNLVPVCSSCHLDIHRNKISILGWKRT 962 >UniRef50_A3X1N6 Putative uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3X1N6_9BRAD Length = 384 Score = 110 bits (275), Expect = 6e-23, Method: Composition-based stats. Identities = 30/138 (21%), Positives = 52/138 (37%), Gaps = 5/138 (3%) Query: 192 AEKICSVYRESDIVPGELTATSILKQRTKNLAPLPYAHQQQKSPQEKTVVSITVDPESPE 251 + ++ + + A L A P T + + + + + Sbjct: 213 TTEDAAIVENAYVAVLNSHAPDHLTGLEPAKATATSEDVGAVVPNSSTPLMVRANSQPVK 272 Query: 252 SFMKLPKRRRWVKEKYTRWVKTQPCACCGMPADDPHHLIGHGQGGMGTKAHDLFVLPLCR 311 +K ++R +++ R+V +QPC C D HHL + K D F +PLCR Sbjct: 273 PLLKTVRQR---SKRHLRFVASQPCLICKGSPCDAHHLKFAQARSLSMKVSDEFTVPLCR 329 Query: 312 KHHNELHT--DTVAFEDK 327 HH ELH + A+ Sbjct: 330 SHHQELHRHGNEAAWWAN 347 >UniRef50_Q0EWL6 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EWL6_9PROT Length = 240 Score = 101 bits (250), Expect = 5e-20, Method: Composition-based stats. Identities = 30/145 (20%), Positives = 51/145 (35%), Gaps = 14/145 (9%) Query: 181 EAVSRRSLGLPAEKICSVYRESDIVPGELTATSILKQRTKNLAPLPYAHQQQKSPQEKTV 240 E V +L + +E I P + R P+ + + Sbjct: 47 EKVCVEALLKRLRVDATPVKEVKISPQKQRKPIARSTRPIARTPITRSTKPIARQPASFP 106 Query: 241 VSITVDPESPESFMKLPKRRRW--VKEKYTRWVKTQPCACCGMPAD--------DPHHLI 290 + + +S + K PK R + ++Y+ W+ QPC GM AD HH+ Sbjct: 107 SNKSGSVQSWRASGKKPKPGRNDIIDDQYSAWLGGQPCIITGMVADRGVGPDSIHCHHIR 166 Query: 291 GHGQGGMGTKAHDLFVLPLCRKHHN 315 G +G + +D +PL H Sbjct: 167 GRSRG----RRNDYAQVPLIGHMHT 187 >UniRef50_D0IZ16 Putative uncharacterized protein n=1 Tax=Comamonas testosteroni CNB-2 RepID=D0IZ16_COMTE Length = 198 Score = 94.1 bits (232), Expect = 7e-18, Method: Composition-based stats. Identities = 32/156 (20%), Positives = 49/156 (31%), Gaps = 22/156 (14%) Query: 189 GLPAEKICSVYRESDIVPGELTATSILKQRTKNLAPLPYAHQQQKSPQEKTVVSITVDPE 248 GL E+ Y E A S ++ + + ++T+ P Sbjct: 24 GLRDEQDEGHYCE------PGQAASREQRLA---ERAARQIESALATASMVPENVTMTPG 74 Query: 249 SPESFMKLPKRRRWVKEKYTRWVKTQPCACCGMPADDPHHLIGHGQGGMGTKAHDLFVLP 308 + + + +PK E Y R V PC CG+ H + G+G K D P Sbjct: 75 AGTTGIVVPKEHAIESEPYRRLVAELPCFWCGISGY-SQHAHLNYGKGLGLKTDDRTGFP 133 Query: 309 LCRK------HH------NELHTDTVAFEDKYGSQL 332 LC H L T +YG + Sbjct: 134 LCCSRPGIEGCHVAYDNYRLLETGGREAHREYGIEA 169 >UniRef50_Q6V7S4 Bcep22gp20 n=3 Tax=root RepID=Q6V7S4_9CAUD Length = 166 Score = 93.3 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 26/138 (18%), Positives = 46/138 (33%), Gaps = 20/138 (14%) Query: 214 ILKQRTKNLAPLPYAHQQQKSPQEKTVVSITVDPESPESFMKLPKRRRWVKEKYTRWVKT 273 L + T + +A P+ + P L + ++ V Sbjct: 11 PLARGTSTMKRTTFARGSTPKPRRAGPPKVRDTPRPRIVPTALAR-------EHMGRVAE 63 Query: 274 QPCACC-----GMPADDPHHLIGHGQGGMGTKAHDLFVLPLCRKHHN------ELHTDTV 322 C C G + HH + G G ++ D +PLC HH LH Sbjct: 64 LGCIVCLNMRLGRSPAEVHHARCYAGG--GQRSSDFHTIPLCPLHHRLGGAGVALHAGRQ 121 Query: 323 AFEDKYGSQLELIFRFID 340 +F +G++ EL+ + + Sbjct: 122 SFARNFGTEAELLLQVLR 139 >UniRef50_B9L925 MutS-related protein n=1 Tax=Nautilia profundicola AmH RepID=B9L925_NAUPA Length = 917 Score = 91.0 bits (224), Expect = 6e-17, Method: Composition-based stats. Identities = 29/130 (22%), Positives = 50/130 (38%), Gaps = 16/130 (12%) Query: 198 VYRESDIVPGELTATSILKQRTKNLAPLPYAHQQQKSPQEKTVVSITVDPESPESFMKLP 257 + + + G ++ L+ A Y ++ E +T + E +K Sbjct: 779 LVYDRKLKDGSGSSVYGLE-----FAKSIYMDKEFIKLAENIRKKLTDEYSEIELLLKKK 833 Query: 258 KRRRWVKEKYTRWVKTQPCACCGMPADDPHHLIGHGQGGMG----TKAHDLF-VLPLCRK 312 K R +V T CA CG P +D HH+ + G H + ++PLC+K Sbjct: 834 KSRYNKNL----FVTT--CAICGKPVEDVHHIKEKEKAKEGFIDHMPVHHKYNLIPLCKK 887 Query: 313 HHNELHTDTV 322 HH +H + Sbjct: 888 HHKMVHEGKI 897 >UniRef50_A1TN12 Putative uncharacterized protein n=3 Tax=Acidovorax RepID=A1TN12_ACIAC Length = 164 Score = 88.7 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 29/136 (21%), Positives = 42/136 (30%), Gaps = 10/136 (7%) Query: 219 TKNLAPLPYAHQQQKSPQEKTVVSITVDPESPESFMKLPKRRRWVKEKYTRWVKTQPCAC 278 L + + +V + +PK E Y R V PC Sbjct: 14 EPGLDREQRLADRAARAMAEVRPRASVVMPCGDLAPSVPKAAPVRSEAYRRLVAALPCMA 73 Query: 279 CGMPA-DDPHHLIGHGQGGMGTKAHDLFVLPLC------RKHHNELHTDTVAFE-DKYGS 330 CGMP H + GMG K DL PLC H+ + + + Sbjct: 74 CGMPGLSQCAHA--NTGKGMGLKVCDLESFPLCSDRPGTPGCHSLFDQGALLSKAARRAI 131 Query: 331 QLELIFRFIDRALAIG 346 + I R +A+G Sbjct: 132 EPAWIADTQRRIIALG 147 >UniRef50_A6Q2C2 DNA mismatch repair ATPase MutS n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q2C2_NITSB Length = 971 Score = 86.8 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 25/137 (18%), Positives = 46/137 (33%), Gaps = 16/137 (11%) Query: 192 AEKICSVYRESDIVPGELTATSILKQRTKNLAPLPYAHQQQKSPQEKTVVSITVDPESPE 251 E+ + + + G L+ A + + +T + E Sbjct: 827 DEENDRLIYDRKLQVGPGGTLYGLE-----FAKALHMDKIFLDYAYSIRKKLTKEYSEIE 881 Query: 252 SFMKLPKRRRWVKEKYTRWVKTQPCACCGMPADDPHHLIGHGQGGMG----TKAHDLF-V 306 + + R Y + V CA C ++ HH+ + G KA+ F + Sbjct: 882 LLKQKKRSR------YNKGVYLTKCAICNEVVEEVHHIEPKAKAKGGFIDHFKANHKFNL 935 Query: 307 LPLCRKHHNELHTDTVA 323 +PLC KHH +H + Sbjct: 936 IPLCSKHHKMVHEGKLL 952 >UniRef50_A4W6Z4 Putative uncharacterized protein n=5 Tax=Proteobacteria RepID=A4W6Z4_ENT38 Length = 102 Score = 86.0 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 34/93 (36%), Gaps = 10/93 (10%) Query: 257 PKRRRWVKEKYTRWVKTQ-PCACCGMPADDPHHLIGHGQGGMGTKAHDLFVLPLCRKHHN 315 P +R + +K+ V C CG H + GMG K D +C H+ Sbjct: 8 PGQRIYRSKKWLAAVGQIEQCVLCGSWGIQVAH--RNEGKGMGLKVDDCATAAICVCCHD 65 Query: 316 ELHTDTVAFEDKYGSQLELIFRFIDRALAIGVL 348 + + + + +DRA+ + V+ Sbjct: 66 SIDNGSKL-------SRDERRQLMDRAIVLTVI 91 >UniRef50_Q30QK8 DNA mismatch repair protein MutS n=3 Tax=Epsilonproteobacteria RepID=Q30QK8_SULDN Length = 1002 Score = 84.9 bits (208), Expect = 4e-15, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 38/107 (35%), Gaps = 12/107 (11%) Query: 222 LAPLPYAHQQQKSPQEKTVVSITVDPESPESFMKLPKRRRWVKEKYTRWVKTQPCACCGM 281 A + + D + E +K KY + + C CG Sbjct: 857 FAKSLHMDSDFLDIANSIRKRLAKDFDELELLVKK------KSSKYNKELYVTKCVICGD 910 Query: 282 PADDPHHLIGH----GQGGMGTKAHDL--FVLPLCRKHHNELHTDTV 322 A+D HH+ G +G + ++PLC++HH ++H + Sbjct: 911 MAEDVHHIKHKSLADEDGFIGHFHKNTKHNLIPLCKEHHKKIHEGKI 957 >UniRef50_A6WVD9 Putative uncharacterized protein n=1 Tax=Ochrobactrum anthropi ATCC 49188 RepID=A6WVD9_OCHA4 Length = 131 Score = 82.9 bits (203), Expect = 1e-14, Method: Composition-based stats. Identities = 28/93 (30%), Positives = 39/93 (41%), Gaps = 11/93 (11%) Query: 248 ESPESFMKLP----KRRRWVKEKYTRWVKTQPCACCGMPADDPHHLI------GHGQGGM 297 P +F P KR R K+ W++T PC G + H+ G G Sbjct: 8 REPTAFSTSPSKGQKRPRRENGKHLAWIRTLPCVITGQYGVEAAHIRYAAPEYGKRDTGK 67 Query: 298 GTKAHDLFVLPLCRKHHNELHT-DTVAFEDKYG 329 K D +V+PL + H E H+ + V F KYG Sbjct: 68 AEKPDDDWVIPLAPELHREQHSMNEVKFWAKYG 100 >UniRef50_A1TMU5 Putative uncharacterized protein n=1 Tax=Acidovorax citrulli AAC00-1 RepID=A1TMU5_ACIAC Length = 200 Score = 82.6 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 23/95 (24%), Positives = 28/95 (29%), Gaps = 8/95 (8%) Query: 231 QQKSPQEKTVVSITVDPESPESFMKLPKRRRWVKEKYTRWVKTQPCACCGMPADDPHHLI 290 Q + P V + + +PK E Y R V PC CG H Sbjct: 59 QARRPAFAPAV-VHALVDPQAVPTTIPKEELLRSEPYRRLVAAMPCKACGRHG-HSQHAH 116 Query: 291 GHGQGGMGTKAHDLFVLPLCRK------HHNELHT 319 + GMG K D PLC H Sbjct: 117 ENQGKGMGLKVDDRRGFPLCTVAPGRVGCHELFDQ 151 >UniRef50_A6UAT1 Putative uncharacterized protein n=1 Tax=Sinorhizobium medicae WSM419 RepID=A6UAT1_SINMW Length = 246 Score = 81.0 bits (198), Expect = 6e-14, Method: Composition-based stats. Identities = 25/114 (21%), Positives = 36/114 (31%), Gaps = 14/114 (12%) Query: 213 SILKQRTKNLAPLPYAHQQQKSPQEKTVVSI--TVDPESPESFMKLPKRRRWVKEKYTRW 270 P ++ I +V P+ PKR+ + Y + Sbjct: 82 HGRSPFASRFQPTAFSKVPLNGGGRVMAYRIANSVRPDP------TPKRKPTKNKDYLAF 135 Query: 271 VKTQPCACCGMPADDPHHL------IGHGQGGMGTKAHDLFVLPLCRKHHNELH 318 + PC G + HL GH G G+K D +VLPL H H Sbjct: 136 IHELPCCVSGRYGVEAAHLSCAAPRFGHYGRGKGSKVSDRWVLPLHPDEHRRQH 189 >UniRef50_B2U8H4 Putative uncharacterized protein n=1 Tax=Ralstonia pickettii 12J RepID=B2U8H4_RALPJ Length = 95 Score = 81.0 bits (198), Expect = 6e-14, Method: Composition-based stats. Identities = 25/85 (29%), Positives = 32/85 (37%), Gaps = 5/85 (5%) Query: 261 RWVKEKYTRWVKTQPCACCGMPAD-DPHHLIGHGQG-GMGTKAHDLFVLPLCRKHHNELH 318 + E R V + PC CG H G GMG KA D ++ LC H E Sbjct: 2 TYRSEPLRRAVASLPCVNCGRHGATQAAHSNLQEHGKGMGHKASDAAIMALCTVCHTEFD 61 Query: 319 TDTVAFEDKYGSQLELIFRFIDRAL 343 + + EL FR+I L Sbjct: 62 QGKGLTKA---DRRELTFRWITATL 83 >UniRef50_B7I7I6 Putative uncharacterized protein n=4 Tax=Acinetobacter RepID=B7I7I6_ACIB5 Length = 91 Score = 80.6 bits (197), Expect = 8e-14, Method: Composition-based stats. Identities = 23/83 (27%), Positives = 31/83 (37%), Gaps = 10/83 (12%) Query: 263 VKEKYTRWVKTQPCACCGMPADDPHHLIGHGQG-GMGTKAHDLFVLPLCRKHHNELHTDT 321 K ++ PC CG P H G G G KA D + +PLC H Sbjct: 2 RDAKRLAAIRKLPCVRCGYPHSQAAHSNFSEHGKGKGIKADDKYTIPLCHSCHQ------ 55 Query: 322 VAFEDKY-GSQLELIFRFIDRAL 343 + D+Y G L + D+ L Sbjct: 56 --WFDQYRGMGLVESKEWFDKML 76 >UniRef50_B4BNF1 HNH nuclease n=3 Tax=Geobacillus RepID=B4BNF1_9BACI Length = 152 Score = 80.2 bits (196), Expect = 9e-14, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 6/87 (6%) Query: 256 LPKRRRWVKE-KYTRWVKTQPCAC--CGMPADDPHHLIGHGQGGMGTKAHDLFVLPLCRK 312 PK R + + +Y R ++ C C CG P + HH+ QGG G + + PLC Sbjct: 24 SPKTRGSISKTEYNRMIEVFGCRCMMCGDPRIEAHHVRFRSQGGRGKWRN---LAPLCHC 80 Query: 313 HHNELHTDTVAFEDKYGSQLELIFRFI 339 H +H + E + ++ ++ Sbjct: 81 CHQAVHQNRALAERLMAMREDMFGKWY 107 >UniRef50_D1B043 DNA mismatch repair protein MutS domain protein n=2 Tax=Campylobacterales RepID=D1B043_SULD5 Length = 977 Score = 79.5 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 20/154 (12%), Positives = 46/154 (29%), Gaps = 17/154 (11%) Query: 175 VVDALPEAVSRRSLGLPAEKICSVYRESDIVPGELTATSILKQRTKNLAPLPYAHQQQKS 234 ++ L E ++ E+ + + G ++ L+ A + + Sbjct: 816 LITELKEVIALHLGVSYDEEQDKLLYNRKLDIGSGSSLYGLE-----FAKSLHMDSEFIK 870 Query: 235 PQEKTVVSITVDPESPESFMKLPKRRRWVKEKYTRWVKTQPCACCGMPADDPHHLIGHGQ 294 + ++ + E + + + Y CA C ++ HH+ Sbjct: 871 MAYEIRRNLAGELGEMELLKQKKRSKYNKNL-YLA-----KCALCDAYVEEVHHIHAQEM 924 Query: 295 GGMGTKAHDLF------VLPLCRKHHNELHTDTV 322 ++PLC KHH +H + Sbjct: 925 ADKHGNIEHFHQNHRYNLIPLCAKHHKMVHEGKI 958 >UniRef50_A6M989 Putative uncharacterized protein n=1 Tax=Geobacillus virus E2 RepID=A6M989_9VIRU Length = 188 Score = 77.9 bits (190), Expect = 5e-13, Method: Composition-based stats. Identities = 32/124 (25%), Positives = 45/124 (36%), Gaps = 17/124 (13%) Query: 210 TATSILKQRTKNLAPLPYAHQQQKSPQEKTVVSITVDPESPESFMKLPKRRRWVKE-KYT 268 A +K R L P + +K + V P K R V + +YT Sbjct: 9 PAAKPVKARKDKLKPRVREKKPKKRKGKAQTYKGRVIP--------SRKVRGSVSKREYT 60 Query: 269 RWVKTQP--CACCGM-PADDPHHLIGHGQGGMGTKAHDLFVLPLCRKHHNELHTDT--VA 323 R V+ C CG + HH+ QGG G + + PLC+ HH H D Sbjct: 61 RMVEEFGSACLVCGSTYNIEAHHVRFRSQGGRGKWRN---LAPLCKIHHQLAHQDRDFAD 117 Query: 324 FEDK 327 + K Sbjct: 118 WLRK 121 >UniRef50_A7MGK3 Putative uncharacterized protein n=7 Tax=Enterobacteriaceae RepID=A7MGK3_ENTS8 Length = 98 Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 27/87 (31%), Gaps = 10/87 (11%) Query: 261 RWVKEKYTRWVKTQPCAC-CGMPADDPHHLIGHGQGGMGTKAHDLFVLPLCRKHHNELHT 319 + K+ V+ C C H + GMG K D LC H+ + Sbjct: 8 IYRSAKWLAAVRQLDCCVLCRRWGVQAAH--RNEDKGMGLKVDDSLTAALCVDCHHAIDN 65 Query: 320 DTVAFEDKYGSQLELIFRFIDRALAIG 346 + E +DRA+ + Sbjct: 66 GSELT-------REERRALMDRAIVLT 85 >UniRef50_A0KJW9 Putative uncharacterized protein n=5 Tax=Gammaproteobacteria RepID=A0KJW9_AERHH Length = 105 Score = 73.3 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 20/93 (21%), Positives = 37/93 (39%), Gaps = 12/93 (12%) Query: 259 RRRWVKEKYTRWVKTQPCACC-----GMPADDPHHLIGHGQGGMGTKAHDLFVLPLCRKH 313 + +++ V + C C G + HH+ GM +A VLPLC +H Sbjct: 2 SKTKADKQWLDDVSSLGCVACRNAGLGPSLAEIHHV--RSGSGMAQRAEHTRVLPLCPRH 59 Query: 314 HNE-----LHTDTVAFEDKYGSQLELIFRFIDR 341 H H +++ ++GS+ L+ + Sbjct: 60 HRACYPTGFHAAPRSWQVEHGSEEALLDQVARE 92 >UniRef50_C7XUW3 Putative uncharacterized protein n=1 Tax=Lactobacillus coleohominis 101-4-CHN RepID=C7XUW3_9LACO Length = 220 Score = 72.2 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 20/79 (25%), Positives = 31/79 (39%), Gaps = 3/79 (3%) Query: 254 MKLPKRRRWVKEKYTRWVKTQPCACCGMPADDPHHLIGHGQGGMGTKAHDL--FVLPLCR 311 +K + K +KT+ C CG P D H G G + + + + LCR Sbjct: 109 LKTWEAIPNEFPKQVLAMKTRSCVICGKPNADLAHYRAVGMGRNRHEIDERKMYFMSLCR 168 Query: 312 KHHNELHT-DTVAFEDKYG 329 +HH H +F K+ Sbjct: 169 EHHQYQHQIGINSFCQKFH 187 >UniRef50_C6BBU0 Putative uncharacterized protein n=1 Tax=Ralstonia pickettii 12D RepID=C6BBU0_RALP1 Length = 91 Score = 71.4 bits (173), Expect = 4e-11, Method: Composition-based stats. Identities = 19/89 (21%), Positives = 36/89 (40%), Gaps = 10/89 (11%) Query: 261 RWVKEKYTRWVKTQPCACC-----GMPADDPHHLIGHGQGGMGTKAHDLFVLPLCRKHHN 315 ++ Y V C C G + HH+ GM +A + +PLC +HH Sbjct: 2 TRAEKDYLGRVAAIGCVLCKRLGYGETPAEIHHV--REGQGMAQRAENWLAVPLCPEHHR 59 Query: 316 ---ELHTDTVAFEDKYGSQLELIFRFIDR 341 +H + +A + +++L+ I+ Sbjct: 60 GKTGIHGNRMALKQVKADEVDLLAWTIEE 88 >UniRef50_C2EXV4 Putative uncharacterized protein n=3 Tax=Lactobacillus RepID=C2EXV4_LACRE Length = 226 Score = 69.5 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 25/97 (25%), Positives = 39/97 (40%), Gaps = 3/97 (3%) Query: 253 FMKLPKRRRWVKEKYTRWVKTQPCACCGMPADDPHHLIGHGQGGMGTKAHD--LFVLPLC 310 K+ + +KT+ CA C D HH+ G G + + +++ PLC Sbjct: 119 HTKIWDSLPDDFPRVMMCIKTKRCAICLKEHADIHHVTAVGMGRNRNEINHVGMYIEPLC 178 Query: 311 RKHHNELHT-DTVAFEDKYGSQLELIFRFIDRALAIG 346 R HH HT F KY + + I + L +G Sbjct: 179 RVHHTIFHTIGAKNFMAKYHIKPIKVTPEIAKELHLG 215 >UniRef50_A7ILD6 Putative uncharacterized protein n=2 Tax=Xanthobacter autotrophicus Py2 RepID=A7ILD6_XANP2 Length = 163 Score = 65.2 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 31/92 (33%), Gaps = 16/92 (17%) Query: 250 PESFMKLPKRRRW-VKEKYTRWVKTQPCACCG-----MPADDPHHLI------GHGQGGM 297 P K P+ R ++ V+ PC G ++ H+ G G Sbjct: 21 PVPSRKTPRERGRQEDAEHLDLVRDLPCLASGTLPTVRRRNEAAHIRYSSSAFGKVNPGG 80 Query: 298 GTKAHDLFVLPLCRKHHN----ELHTDTVAFE 325 G K D + +PL + H H++ + Sbjct: 81 GAKPDDRWTVPLSPEKHQGSKDAQHSNGEEWW 112 >UniRef50_Q2G3W4 Putative uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans DSM 12444 RepID=Q2G3W4_NOVAD Length = 107 Score = 64.8 bits (156), Expect = 4e-09, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 22/63 (34%) Query: 257 PKRRRWVKEKYTRWVKTQPCACCGMPADDPHHLIGHGQGGMGTKAHDLFVLPLCRKHHNE 316 K ++++ V PC G HH+ G+ V+PL ++H Sbjct: 3 KKPPTAAEKRHMARVAEMPCLVSGRSPVTLHHVTGYADRMGRFARSHKLVVPLAPEYHLI 62 Query: 317 LHT 319 H Sbjct: 63 QHD 65 >UniRef50_C6JMX6 Predicted protein n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JMX6_FUSVA Length = 165 Score = 64.1 bits (154), Expect = 8e-09, Method: Composition-based stats. Identities = 23/74 (31%), Positives = 30/74 (40%), Gaps = 8/74 (10%) Query: 267 YTRWVKTQPCACCGMPADDPHHLIGHGQGGMGTKAHDLFVLP---LCRKHHNELHT--DT 321 Y V + C CG PHH G K D LP LC HH+ELH+ + Sbjct: 67 YLCLVNKR-CCICGRKVTFPHHHKSVSMVGGYKK--DKGTLPIVALCPYHHSELHSSINK 123 Query: 322 VAFEDKYGSQLELI 335 + K+ + LI Sbjct: 124 FDWIAKHETYAPLI 137 >UniRef50_C5A7R6 Putative uncharacterized protein n=1 Tax=Burkholderia glumae BGR1 RepID=C5A7R6_BURGB Length = 111 Score = 63.3 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 26/78 (33%), Gaps = 9/78 (11%) Query: 257 PKRRRWVKEKYTRWVKTQPCACCG-MPADDPHHLIGHGQGGMGTKAHDLFVLPLC----- 310 PK + E R V T PC CG H+ G KA D + LC Sbjct: 9 PKVLTFRSEDLRRLVVTLPCMNCGVERYTQAAHMNL--GKGGALKASDAAIAALCCDRPG 66 Query: 311 -RKHHNELHTDTVAFEDK 327 R H L V + + Sbjct: 67 IRGCHAMLDQGGVMTKSE 84 >UniRef50_B5W3B8 HNH endonuclease n=1 Tax=Arthrospira maxima CS-328 RepID=B5W3B8_SPIMA Length = 80 Score = 62.9 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 28/71 (39%), Gaps = 8/71 (11%) Query: 258 KRRRWVKEKYTRWVKTQP---CACCGMPADDPH--HLIGHGQGGMGTKAHDLFVLPLCRK 312 K+R +K + VK + C CG + H H+I + GG A ++ LC Sbjct: 7 KKRPNEHKKAQKLVKQRDGNECEICGKIGEIAHGHHVIAYSDGG---PADLTNMMTLCPD 63 Query: 313 HHNELHTDTVA 323 H H + Sbjct: 64 CHRAYHNGEIK 74 >UniRef50_Q94Z00 Orf757 n=4 Tax=stramenopiles RepID=Q94Z00_PYLLI Length = 757 Score = 62.5 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 20/79 (25%), Positives = 30/79 (37%), Gaps = 17/79 (21%) Query: 274 QPCACCGMPADDPHHLI-------GHGQGGMGTK-----AHDLFVLPLCRKHHNELHTDT 321 C CG + HH+ + GG+ A + +PLC+ HH LH T Sbjct: 681 MGCLVCGETPSEMHHVRKIKDLKSRYDSGGIAFWTLQMAAINRKQIPLCKIHHLALHRGT 740 Query: 322 VAFEDKYGSQLELIFRFID 340 + S+ EL+ I Sbjct: 741 LT-----HSERELLKEAIR 754 >UniRef50_Q03VL2 Putative uncharacterized protein n=1 Tax=Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 RepID=Q03VL2_LEUMM Length = 234 Score = 61.8 bits (148), Expect = 3e-08, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 25/57 (43%), Gaps = 3/57 (5%) Query: 276 CACCGMPADDPHHLIGHGQGGMGTKAHDL--FVLPLCRKHHNELHT-DTVAFEDKYG 329 C CG D HHL GQG K + L + LCR HH E H+ F K+ Sbjct: 158 CVICGKRPSDLHHLDTIGQGVDRRKTNHLKHRAVQLCRIHHQEAHSLGIETFLQKHH 214 >UniRef50_Q2FUP5 Phi PV83 orf 19-like protein n=90 Tax=root RepID=Q2FUP5_STAA8 Length = 230 Score = 61.8 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 23/59 (38%), Positives = 29/59 (49%), Gaps = 3/59 (5%) Query: 274 QPCACCGMPADDPHH--LIGHGQGGMGTKAHDLFVLPLCRKHHNELHT-DTVAFEDKYG 329 + C CG P D H +G G +D VL LCR+HHNE H +F+DKY Sbjct: 143 RNCVICGKPHADLAHYEAVGRGMNRNKMNHYDKHVLALCRQHHNEQHAIGVKSFDDKYH 201 >UniRef50_B3XS05 Putative uncharacterized protein n=1 Tax=Lactobacillus reuteri 100-23 RepID=B3XS05_LACRE Length = 228 Score = 61.4 bits (147), Expect = 5e-08, Method: Composition-based stats. Identities = 22/62 (35%), Positives = 26/62 (41%), Gaps = 6/62 (9%) Query: 273 TQPCACCGMPADDPHHLIGH--GQGGMGTKAHD--LFVLPLCRKHHNELHT-DTVAFEDK 327 C CG AD HH+ G G G K + PLCR HH E+ + FE K Sbjct: 144 KDKCVICGKKADF-HHVEGSVVGMGNNRNKIDHSKRELYPLCRFHHQEIERLNNKRFEAK 202 Query: 328 YG 329 Y Sbjct: 203 YH 204 >UniRef50_C8P906 Putative uncharacterized protein n=1 Tax=Lactobacillus antri DSM 16041 RepID=C8P906_9LACO Length = 230 Score = 59.1 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 26/75 (34%), Positives = 30/75 (40%), Gaps = 4/75 (5%) Query: 276 CACCGMPADDPHHLIGHGQGGMGTKAHDL--FVLPLCRKHHNELHT-DTVAFEDKYGSQL 332 C CG A D HH+ G G ++ LCR HH E H +VAF KY Sbjct: 148 CLICGRHA-DTHHVDAVGMGRDRNHIDHTKHRLMALCRDHHTEYHKIGSVAFAKKYLITR 206 Query: 333 ELIFRFIDRALAIGV 347 I D IGV Sbjct: 207 LGIRLNADDLKKIGV 221 >UniRef50_C5RA90 Putative uncharacterized protein n=1 Tax=Weissella paramesenteroides ATCC 33313 RepID=C5RA90_WEIPA Length = 236 Score = 59.1 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 4/68 (5%) Query: 271 VKTQPCACCGMPADDPHHLIGHGQGGMGTKAHDL--FVLPLCRKHHNELHT-DTVAFEDK 327 +K + C CG A D HHL G G ++ LCR+HH E H F++K Sbjct: 139 LKYRSCVICGKHA-DVHHLDTVGMGNDRNLVDHRQKHLIALCREHHQEAHKLGWPTFKEK 197 Query: 328 YGSQLELI 335 Y + L+ Sbjct: 198 YHVKGILL 205 >UniRef50_UPI0001BCECFE hypothetical protein SnoxA4_08445 n=1 Tax=Selenomonas noxia ATCC 43541 RepID=UPI0001BCECFE Length = 219 Score = 56.7 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 4/56 (7%) Query: 276 CACCGMPADDPHHLIGHGQGGMGTKAHD--LFVLPLCRKHHNELHT-DTVAFEDKY 328 CA CG A + HH+ G G + + LPLCR+HH E+H F +Y Sbjct: 143 CAVCGRKA-ELHHVDAVGMGRNRKEICHIGMRALPLCREHHTEIHAVGREDFLRRY 197 >UniRef50_C7CVU1 Predicted protein n=12 Tax=Enterococcus faecalis RepID=C7CVU1_ENTFA Length = 213 Score = 54.1 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 24/100 (24%), Positives = 39/100 (39%), Gaps = 5/100 (5%) Query: 251 ESFMKLPKRRRWVKEKYTRW-VKTQPCACCGMPADDPHHLIGHGQGGMGTKAHD--LFVL 307 + ++ + K+ + +K + C CG AD H+ G G K + Sbjct: 114 DVPLEKSYQYLLENNKWFYYCLKYRKCCICGKHADVC-HIEVVGMGRNRQKINHETFTFY 172 Query: 308 PLCRKHHNELHT-DTVAFEDKYGSQLELIFRFIDRALAIG 346 CR+HH E H T F +KY + + + L IG Sbjct: 173 AGCRQHHQEEHQIGTKNFLNKYQIKPVKLNVEERKKLNIG 212 >UniRef50_B5QQ16 Putative uncharacterized protein n=1 Tax=Lactobacillus rhamnosus HN001 RepID=B5QQ16_LACRH Length = 222 Score = 54.1 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 29/78 (37%), Gaps = 4/78 (5%) Query: 255 KLPKRRRWVKEKYTRWVKTQPCACCGMPADDPHHLIGHGQGGMGTKAHDLFV--LPLCRK 312 K + ++ + C CG PA D H G G + + + LCR Sbjct: 125 KTWDMIPNDYARQWFCLRFRKCVICGNPA-DLAHYEAVGMGRNRNRIDETKFRYMSLCRI 183 Query: 313 HHNELHT-DTVAFEDKYG 329 HH E HT +F KY Sbjct: 184 HHVEQHTIGIESFVQKYH 201 >UniRef50_Q03RB7 Putative uncharacterized protein n=1 Tax=Lactobacillus brevis ATCC 367 RepID=Q03RB7_LACBA Length = 233 Score = 53.7 bits (127), Expect = 9e-06, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 2/78 (2%) Query: 271 VKTQPCACCGMPADDPH-HLIGHGQGGMGTKAHDLFVLPLCRKHHNELHT-DTVAFEDKY 328 +K C C PAD H H +G G+ +V+ LCR+HH E H +F + Sbjct: 140 IKYHRCMICNQPADIAHVHAVGIGRDRNHISHIGNYVMALCRRHHQEQHRVGIKSFMKEN 199 Query: 329 GSQLELIFRFIDRALAIG 346 + + I + L +G Sbjct: 200 QLKGVKVTPEIAKMLKLG 217 >UniRef50_O03913 Rorf242 protein n=7 Tax=root RepID=O03913_9CAUD Length = 242 Score = 53.3 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 39/97 (40%), Gaps = 9/97 (9%) Query: 258 KRRRWVKEKYT-RWVKTQPCACCGMPADDPHHLIGHGQGGMGTKAHD--LFVLPLCRKHH 314 K +E Y + + + C CG A D HH+ G G T V+ LCR HH Sbjct: 131 KLLPHEQEYYLFQCCRHRVCMICGNRA-DIHHVDVIGAGLNRTHVDHTKRHVMALCRIHH 189 Query: 315 NELHT-DTVAFEDKYGSQLE---LIFRFIDRALAIGV 347 +E+ AF KY ++ L + R + + Sbjct: 190 SEIEQIGANAFSAKYHVPVDGIKLDKETLKR-IGLNA 225 >UniRef50_UPI0001BC4E57 hypothetical protein F3_00857 n=1 Tax=Fusobacterium sp. 3_1_5R RepID=UPI0001BC4E57 Length = 262 Score = 52.5 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 24/91 (26%), Positives = 35/91 (38%), Gaps = 10/91 (10%) Query: 249 SPESFMKLPKRRRWVKEKYTRWVKT----QPCACCGMPADDPHHLIGHGQGGMGTKAHD- 303 + + K+ R V R+V + CA CG + HH G G + D Sbjct: 125 EGKGPLMKRKQARDVVPDIRRFVLACLLNKTCAVCGRKNVELHHWDPI--GSFGYEHDDG 182 Query: 304 --LFVLPLCRKHHNELHT-DTVAFEDKYGSQ 331 + LC +HH+E H FE +Y Q Sbjct: 183 LQTRFISLCGEHHSEFHLIGAEEFERRYHLQ 213 >UniRef50_D1AH86 Putative uncharacterized protein n=3 Tax=Fusobacteriaceae RepID=D1AH86_SEBTE Length = 244 Score = 52.1 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 19/76 (25%), Positives = 29/76 (38%), Gaps = 9/76 (11%) Query: 271 VKTQPCACCGMPADD-----PHHLIGHGQGGMGTKAHDLFVLP---LCRKHHNEL-HTDT 321 ++ + CA CG D+ HH + D P LC +HH E H Sbjct: 149 LRNRVCAICGKRHDEYNTVELHHWKSVASAVGTYENDDGLSTPFISLCTEHHQEFHHRGV 208 Query: 322 VAFEDKYGSQLELIFR 337 +F+DKY + + Sbjct: 209 ESFKDKYHIEGVYLNE 224 >UniRef50_B1KZ53 Putative uncharacterized protein n=10 Tax=Clostridium RepID=B1KZ53_CLOBM Length = 134 Score = 51.4 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 3/44 (6%) Query: 276 CACCGMPADDPHHLIGHGQGGMGTKAHDLFVLPLCRKHHNELHT 319 C CG + HH+I +GGM + + + LC +HH H+ Sbjct: 4 CEVCGREGAEIHHIIHKCEGGMDLEINYKY---LCGRHHRGRHS 44 >UniRef50_Q5VJ21 Putative uncharacterized protein n=1 Tax=Aeromonas hydrophila RepID=Q5VJ21_AERHY Length = 302 Score = 50.2 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 22/48 (45%), Gaps = 5/48 (10%) Query: 303 DLFVLPLCRKHHNE-----LHTDTVAFEDKYGSQLELIFRFIDRALAI 345 VLPLC +HH H +++ ++GS+ L+ + +I Sbjct: 20 HTQVLPLCPRHHRACYPTGFHAAPRSWQVEHGSEEVLLEQVARYEKSI 67 >UniRef50_C4WNE8 Putative uncharacterized protein n=1 Tax=Ochrobactrum intermedium LMG 3301 RepID=C4WNE8_9RHIZ Length = 282 Score = 49.8 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 26/177 (14%), Positives = 47/177 (26%), Gaps = 23/177 (12%) Query: 157 QERELSLAELSWWAVCNQVVDA--LPEAVSRRSLGLPAEKICSVYRESDIVPGELTATSI 214 ++ + +L + + D L V S + I+ +I Sbjct: 93 RDHAMLGKDLLLFESLGKGKDLIFLGSFVCE-SWRWGQSPDRNDDMRKAIIFELRNLENI 151 Query: 215 LKQRTKNLAPLPYAHQQQKSPQEKTVVSITVDPESPESFMKLPKRRRWVKEKYTRWVKTQ 274 ++ P+P ++ + R Y Sbjct: 152 VEAVDDE-QPVPAVDLAAMRDLA----RQAAGSREGKASTRTIYERSRHVRDYVLARANG 206 Query: 275 PCACC----------GMPADDPHHLIGHGQGGMGTKAHD-LFVLPLCRKHHNELHTD 320 C C G P +PHH+ GG D +V+ LC H ++H Sbjct: 207 HCEGCSCQAPFLRINGQPYLEPHHIRRVSDGG----PDDPSYVIALCPTCHRKVHHG 259 >UniRef50_D0LCK0 HNH endonuclease n=3 Tax=Gordonia bronchialis DSM 43247 RepID=D0LCK0_GORB4 Length = 418 Score = 49.8 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 15/76 (19%), Positives = 26/76 (34%), Gaps = 8/76 (10%) Query: 260 RRWVKEKYTRWVKTQPCAC-CGMPA--DDPHHLIGHGQGGMGTKAHDLFVLPLCRKHHNE 316 R + + + C CG PA HH+ + GG + LC H + Sbjct: 316 RLFGPKLRKALIARDQCCIKCGAPAGWTHAHHITFYSHGGKTVLDNGCL---LCPSCHTD 372 Query: 317 LHTDTVAFEDKYGSQL 332 +H + ++ G Sbjct: 373 VHHNG--WDVVMGDDR 386 >UniRef50_C7QFC8 HNH endonuclease n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7QFC8_CATAD Length = 391 Score = 49.0 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 35/156 (22%), Positives = 54/156 (34%), Gaps = 11/156 (7%) Query: 186 RSLGLPAEKICSVYRESDIVPGELTATSILKQRTKNLAPLPYAHQQQKSPQEKTVVSITV 245 R+ LP + A A + E + ++ V Sbjct: 194 RAGDLPQRHNGPTTMTIVMRADTAQALPGAPAARTGRGRAVPAAEAHMLRCEAALRAVLV 253 Query: 246 DPESPESFMKLPKRRRWVKEKYTRW-VKTQPCAC--CGMPA--DDPHHLIGHGQGGMGTK 300 D + E + KRR + +Y V+ C C P D HH I G GG T Sbjct: 254 DGD-GEILWQGRKRRLATRAQYEAMAVRDGGCTAPGCDRPPRECDAHHDIPWGAGG-HTD 311 Query: 301 AHDLFVLPLCRKHHNELHTDTVAFEDKYGSQLELIF 336 + + LCR+HH ELH ++ ++G Q + Sbjct: 312 VDQMRL--LCRRHHRELHD--ELWQRQHGWQDAEVR 343 >UniRef50_A6TRB8 Putative uncharacterized protein n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TRB8_ALKMQ Length = 230 Score = 48.7 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 4/57 (7%) Query: 271 VKTQPCACCGMPADDPHHLIGH--GQGGMGTKAHD--LFVLPLCRKHHNELHTDTVA 323 VK + C G P D HH+ G G G + L ++ L R HN++H + Sbjct: 145 VKYRKCCITGKPNADIHHVTGSRVGMGRNRKRMSHEGLKLMALSRDWHNKVHQEGEE 201 >UniRef50_UPI0001BC4568 hypothetical protein FuD12_02539 n=1 Tax=Fusobacterium sp. D12 RepID=UPI0001BC4568 Length = 243 Score = 48.3 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 8/91 (8%) Query: 258 KRRRWVKEKYTRWVKTQPCACCGMPADDPHHLIGHGQGGMGTKAHD---LFVLPLCRKHH 314 K + + + K + C CG + HH+ +G G K D V LCRKHH Sbjct: 143 KEQEYEHYIWFCL-KYKACEVCGNVG-ELHHVD--QRGSKGYKTDDGRNERVTCLCRKHH 198 Query: 315 NELHTDTVAFEDKYGSQLELIFRFIDRALAI 345 +E+H D A+E KYG + + L + Sbjct: 199 SEIHADARAYE-KYGIHGIYLTDSMIEKLKL 228 >UniRef50_Q7WKA2 Putative uncharacterized protein n=2 Tax=Bordetella bronchiseptica RepID=Q7WKA2_BORBR Length = 138 Score = 48.3 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 37/113 (32%), Gaps = 11/113 (9%) Query: 235 PQEKTVVSITVDPESPESFMKLPKRRR-WVKEKYTRWVKTQPCA-----CC---GMPADD 285 KT + + + PK+R + KY + + C CC G P Sbjct: 9 MSRKTPLRASTGLARAAIKRRAPKKRPGYHDPKYLAACRGERCYQQFAGCCSYKGDPTVV 68 Query: 286 PHHLIGHGQGGMGTKAHDLFVLPLCRKHHNELHTDTVAFEDKYGSQLELIFRF 338 P H + G G K D F +P C H + E K + R+ Sbjct: 69 PAH--QNQGKGTGLKVPDRFTVPACYHCHTLYDQSGLDREHKRATWDWGYTRW 119 >UniRef50_B0VK84 Putative uncharacterized protein 84 n=1 Tax=Azospirillum phage Cd RepID=B0VK84_9CAUD Length = 140 Score = 47.5 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 38/112 (33%), Gaps = 15/112 (13%) Query: 228 AHQQQKSPQEKTVVSITVDPESPESFMKLPKRRRWVKEKYTRWVKTQPCAC-----CGMP 282 +QQ S P+ + P R + +K+ + V C C P Sbjct: 6 QRRQQPRQPSGIDYSALAIPKGGKVGRVKPGR--YENDKHRKDVAGMLCCLWQLGECNGP 63 Query: 283 ADDPHH--LIGHGQGGMGTKAHDLFVLPLCRKHHNE-----LHTDTVAFEDK 327 HH + G G ++ D +LPLC HH H + AF + Sbjct: 64 VAG-HHLLIPWVGIRGGKRRSDDRNLLPLCHHHHVGDGGVHRHGNEEAFFRE 114 >UniRef50_D2RPV1 Restriction endonuclease-like protein n=1 Tax=Haloterrigena turkmenica DSM 5511 RepID=D2RPV1_9EURY Length = 496 Score = 47.1 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 23/138 (16%), Positives = 39/138 (28%), Gaps = 16/138 (11%) Query: 206 PGELTATSILKQRTKNLAPLPYAHQQQKSPQEKTVVSITVDPESPESFMKLPKRRRWVKE 265 P E A + A + + + +T D E + + R Sbjct: 320 PTEFEALADSVVDGDTETGSASAESETSDDSDGSEPPLTADEEEFTA--TQRRVRSSTFA 377 Query: 266 KYTRWVKTQPCACCGMPAD--------DPHHLIGHGQGGMGTKAHDLFVLPLCRKHHNEL 317 K + + CA CG + + H+ + G T + L LCR HH Sbjct: 378 KRVKTAYGRRCAICGASRESPAGTVDIEAAHIYPKKENGRDTVRN---GLALCRLHHWAF 434 Query: 318 HTDTVAFEDKYGSQLELI 335 + L+ Sbjct: 435 DAG---WLAVTDDYRVLV 449 >UniRef50_Q8HQ89 ORF777 (Fragment) n=1 Tax=Schizosaccharomyces octosporus RepID=Q8HQ89_SCHOT Length = 777 Score = 46.7 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 23/58 (39%), Gaps = 6/58 (10%) Query: 271 VKTQPCACCG-MPADDPHHLIGHGQGGMGTKA-----HDLFVLPLCRKHHNELHTDTV 322 V +PC CG + HH+ +G + +P+C H+++H+ Sbjct: 711 VWDEPCIICGTNEKVEMHHVNHIRRGKKVGFTGLQSQLNRKQIPVCVNCHDKIHSGKY 768 >UniRef50_Q5UQU6 Putative DNA mismatch repair protein mutS homolog L359 n=1 Tax=Acanthamoeba polyphaga mimivirus RepID=MUTSL_MIMIV Length = 1124 Score = 46.3 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 25/158 (15%), Positives = 49/158 (31%), Gaps = 31/158 (19%) Query: 182 AVSRRSLGLP-AEKICSVYRESDIVPGELTATSILKQRTKNLAPLPYAHQQQKSPQEKTV 240 + L E+ + + ++PG + L A + + + E Sbjct: 910 NLRVYHLRTEYDEENDCIIFDRKLMPGSGPSVYGLLV-----ARYLVKNPKFINRAEIIK 964 Query: 241 VSITVDPESPESFMKLPKRRRWVKEKYTRWVKTQPCACCGMPAD-------DPHHLIGHG 293 +T D +PK+ Y + + + C C + HH+ Sbjct: 965 KRLTNDIN----VNLIPKK-----SNYNKDLLVKQCMICRYIPTTEYHKELESHHIHFQK 1015 Query: 294 ----QGGMGTKA-----HDLFVLPLCRKHHNELHTDTV 322 G + K ++ LCRK HN++H + Sbjct: 1016 NCWTDGKIKEKPYLSKNKLYNLVVLCRKCHNKVHQGEI 1053 >UniRef50_C4ZC63 Putative uncharacterized protein n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4ZC63_EUBR3 Length = 123 Score = 46.3 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 22/83 (26%), Positives = 33/83 (39%), Gaps = 19/83 (22%) Query: 276 CACCGMPADDPHHLIGHGQGGMGTKAHDLFVLPLCRKHHNE------LHTDTV------- 322 C CG P++ HHL+ G G D +P+C HN +H + + Sbjct: 13 CFICGRPSEAEHHLVF-GTAGRELSEKDGLKVPVCNNCHNMGEILMRIHGNPMAERMSKI 71 Query: 323 ----AFEDKYGSQ-LELIFRFID 340 A+E +Y Q + R ID Sbjct: 72 IGQLAWEKEYALQKADEFARIID 94 >UniRef50_Q44141 Anaredoxin n=1 Tax=Nostoc sp. PCC 7120 RepID=ANRX_ANASP Length = 76 Score = 46.3 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 25/68 (36%), Gaps = 8/68 (11%) Query: 259 RRRWVKEKYTRWVKTQ---PCACCGMPADDP--HHLIGHGQGGMGTKAHDLFVLPLCRKH 313 +R + K + VK C C HHLI + +GG A ++ LC Sbjct: 4 KRPYEHRKAQKQVKNLESYQCMVCWEVNSKANGHHLIPYSEGGS---ADIQNMMTLCPSC 60 Query: 314 HNELHTDT 321 H + H Sbjct: 61 HTKYHKGE 68 >UniRef50_B1N1A3 NicA n=1 Tax=Pseudomonas putida RepID=B1N1A3_PSEPU Length = 618 Score = 46.3 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 21/56 (37%), Gaps = 8/56 (14%) Query: 275 PCACC--GMPADDPH--HLIGHGQGGMGTKA----HDLFVLPLCRKHHNELHTDTV 322 PC C G H H+ GQ G K + +P+C + H ++H Sbjct: 547 PCVICESGDRVAMHHVRHIRKMGQEIKGFKRVLVSLNRKQIPVCHECHLKIHQGKY 602 >UniRef50_C9RBS6 HNH endonuclease n=4 Tax=Ammonifex degensii KC4 RepID=C9RBS6_AMMDK Length = 388 Score = 46.3 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 24/131 (18%), Positives = 45/131 (34%), Gaps = 9/131 (6%) Query: 224 PLPYAHQQQ----KSPQEKTVVSITVDPESPESFMKLPKRRRWVKEKYTRWVKTQPCACC 279 P ++ + K VD E S +K P + + C C Sbjct: 132 PSVRQKKEAIYRVLADLAKIAPISGVDVELVSSGVKNPALPG-KSTREKVLNRDGACVLC 190 Query: 280 GMPAD-DPHHLIGHGQGGMGTKAHDLFVLPLCRKHHNELHTDTVAFEDKYGSQLELIFRF 338 G HHL+ +GG T + + LC + H +LH + + + + Sbjct: 191 GSTRRLQRHHLVPRSKGGTDTPEN---QVLLCAECHRKLHAGGATLDRRGKTFAWVAHAV 247 Query: 339 IDRALAIGVLA 349 + +A + +L+ Sbjct: 248 LGKAYLLALLS 258 >UniRef50_C0YLQ1 RNA-directed DNA polymerase n=40 Tax=Bacteria RepID=C0YLQ1_9FLAO Length = 624 Score = 46.0 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 22/146 (15%), Positives = 41/146 (28%), Gaps = 23/146 (15%) Query: 183 VSRRSLGLPAEKICSVYRESDIVPGELTATSILKQRTKNLAPLPYAHQQQKSPQEKTVVS 242 + + EK +P + I+ +R + Q+ + Sbjct: 493 ALKYQTSISQEKTKRCINGVFSIPYKNRKGDIMYRR---FYKEGFKRQKAARGAYVDSLP 549 Query: 243 ITVDPESPESFMKLPKRRRWVKEKYTRWVKTQPCACCGM-PADDPHHLI------GHGQG 295 +TV + + ++ Q C CG + HH+ G Sbjct: 550 VTVTITGGRNSLIT-------------RLQNQKCELCGANEKLEMHHIRKLKDLKGKQDW 596 Query: 296 GMGTKAHDLFVLPLCRKHHNELHTDT 321 A L LC K H+++H Sbjct: 597 EKRMSARRRKTLALCSKCHDKIHAGK 622 >UniRef50_B9DZU4 Putative uncharacterized protein n=13 Tax=Clostridium RepID=B9DZU4_CLOK1 Length = 142 Score = 46.0 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 4/67 (5%) Query: 272 KTQPCACCGMPADDPHHLIGHGQGGMGTKAHDLFVLPLCRKHHNELHTDTVAFEDKYGSQ 331 K C CG PAD HH++ QGG+ + + LC +HH + + + Sbjct: 11 KLLKCQICGKPADK-HHIVYRSQGGLDFPLNFKY---LCSEHHRGKNGPHKNKKVDLEYK 66 Query: 332 LELIFRF 338 LE+ + Sbjct: 67 LEMQKQL 73 >UniRef50_C3JKQ0 HNH endonuclease n=2 Tax=Rhodococcus erythropolis RepID=C3JKQ0_RHOER Length = 427 Score = 46.0 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 14/79 (17%), Positives = 21/79 (26%), Gaps = 7/79 (8%) Query: 249 SPESFMKLPKRRRWVKEKYTRWVKTQPCA---CCGMPA-DDPHHLIGHGQGGMGTKAHDL 304 + R ++ C CG HH+ G+GG Sbjct: 286 EGCVLNLGRRTRVVSAKQMLALNYRDGCCRTPGCGRTRFLHAHHVKFWGRGG---NTDLD 342 Query: 305 FVLPLCRKHHNELHTDTVA 323 ++ LC H LH Sbjct: 343 NLIMLCGTCHRALHDGQFT 361 >UniRef50_Q3IQ78 Probable HNH-type endonuclease n=1 Tax=Natronomonas pharaonis DSM 2160 RepID=Q3IQ78_NATPD Length = 209 Score = 46.0 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 30/76 (39%), Gaps = 11/76 (14%) Query: 254 MKLPKRRRWVKEKYTRWVKTQP---CACCG-MPADDPHHLIG-HGQGGMGTKAHDLFVLP 308 M +P + + +Y C CG HH+ G H G+ ++P Sbjct: 1 MLIPNEKAKMCMEYRDRCLKTKGEYCHSCGVRQNIQVHHIDGDHSNNGL------DNLVP 54 Query: 309 LCRKHHNELHTDTVAF 324 LC H+++H+ + + Sbjct: 55 LCANCHSKVHSGEIDW 70 >UniRef50_P35926 Recombination enhancement function protein n=5 Tax=root RepID=REF_BPP1 Length = 186 Score = 45.6 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 27/142 (19%), Positives = 46/142 (32%), Gaps = 17/142 (11%) Query: 192 AEKICSVYRESDIVPGELTATSILKQRTKNLAPLPYAHQQQKSPQEKTVVSITVDPESPE 251 A + ++ R+ + + + S ++ L +Q++ P V +S Sbjct: 17 AARERAIARQREKLADPVWRESQYQKMRDTLDR--RIAKQKERPPASKTRKSAVKIKSRG 74 Query: 252 SFMKLPKRRRWVKEKYTRWVKTQPCACCGMPADD-----PHHLIGHGQGGMGTKAHDLFV 306 + P + + + PC C M HH+ G G Sbjct: 75 LKGRTP---TAEERRIANALGALPCIACYMHGVISNEVSLHHIAGRTAPG-----CHKKQ 126 Query: 307 LPLCRKHHNELHTDTVAFEDKY 328 LPLCR HH H +KY Sbjct: 127 LPLCRWHHQ--HAAPAEVREKY 146 >UniRef50_B0MFF1 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MFF1_9FIRM Length = 179 Score = 45.6 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 25/66 (37%), Gaps = 4/66 (6%) Query: 276 CACCGMPADDPHHLIGHGQGGMGTKAHDLFVLPLCRKHHNELHTDTVAFEDKYGSQLELI 335 C C P + HH+I +G T + PLC + H+ + + + Sbjct: 19 CVICQEPFVEVHHIIPQNEGDEDTIEN---AAPLCSRCHDLYVDNPAKRKQIPQM-RDYW 74 Query: 336 FRFIDR 341 F +++ Sbjct: 75 FEVMEK 80 >UniRef50_D2CK02 Putative uncharacterized protein orf3 (Fragment) n=1 Tax=Candida viswanathii RepID=D2CK02_9ASCO Length = 801 Score = 45.6 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 13/64 (20%), Positives = 21/64 (32%), Gaps = 8/64 (12%) Query: 268 TRWVKTQPCACCG-MPADDPHHLIGHGQGGMGTKAHD-------LFVLPLCRKHHNELHT 319 V + CA C + HH+ D +PLCR+ H + H Sbjct: 720 LATVMDKSCAVCDSKYRVEMHHIRQMKNLKAIKGTLDYLMAKARRKQIPLCRECHMKFHN 779 Query: 320 DTVA 323 ++ Sbjct: 780 GKLS 783 >UniRef50_B6VWC0 Putative uncharacterized protein n=1 Tax=Bacteroides dorei DSM 17855 RepID=B6VWC0_9BACE Length = 284 Score = 45.6 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 31/84 (36%), Gaps = 13/84 (15%) Query: 253 FMKLPKRRRWVKEKYTRWVKTQPCACCG---------MPADDPHHLIGHGQGGMGTKAHD 303 F+K+ K R V + + C CG P D HH+ Q + Sbjct: 185 FVKIRKLDRNVCLN-LKKLYNFRCQICGQLISAPYGNKPVVDAHHIEFFTQ---SLNNNY 240 Query: 304 LFVLPLCRKHHNELHTDTVAFEDK 327 V+ LC HH +HT F+ + Sbjct: 241 NNVMILCPNHHRIVHTYRPLFKRQ 264 >UniRef50_Q5WE26 Putative uncharacterized protein n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WE26_BACSK Length = 153 Score = 45.6 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 24/134 (17%), Positives = 41/134 (30%), Gaps = 22/134 (16%) Query: 203 DIVPGELTATSILKQRTKNLAPLPYAHQQQKSPQEKTVVSITVDPESPESFMKLPKRRRW 262 D+ + A +++R + + K P + ++ K Sbjct: 3 DLSQQPVRAVPKIRERRPKKSKKMEQFKGVKIPSRRVR-------------GQISKADYE 49 Query: 263 VKEKYTRWVKTQPCACCGMPADDPHHLIGHGQGGMGTKAHDLFVLPLCRKHHNELHTDTV 322 +Y CA G + HH GG GT + ++PL + H + HTD Sbjct: 50 KALEYWGG----GCAVTGQLTVEMHHAKFRSSGGRGTWRN---LVPLIQPLHRKCHTDRE 102 Query: 323 AFEDKYGSQLELIF 336 Y Q Sbjct: 103 --FADYWRQELEKR 114 >UniRef50_B0I1N9 Reverse transcriptase homolog n=7 Tax=cellular organisms RepID=B0I1N9_PYLLI Length = 749 Score = 45.2 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 11/73 (15%), Positives = 28/73 (38%), Gaps = 12/73 (16%) Query: 261 RWVKEKYTRWVKTQPCACCGMP-ADDPHHLIGHGQGGMGTKAH---------DLFVLPLC 310 + + Y ++++ C CG + HH+ + G + + +P+C Sbjct: 669 SFRTKAYV--LQSKNCCICGSSENIELHHVRHLRKMGNVANSDYLLRQMSIINRKQIPVC 726 Query: 311 RKHHNELHTDTVA 323 + H +H + + Sbjct: 727 KACHISIHKGSYS 739 >UniRef50_Q9G8T2 Orf762 n=2 Tax=Eukaryota RepID=Q9G8T2_RHDSA Length = 762 Score = 45.2 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 31/92 (33%), Gaps = 15/92 (16%) Query: 248 ESPESFMKLPKRRRWVKEKYTRWVKTQPCACCGMPADDPHHLIGHGQGGMGTKAH----- 302 P++ + KR K + + C CG + +H+ K Sbjct: 664 NPPDTEQVISKRWNNKLTKSSLFKA---CVICGTTPAEMYHVCKTRDLRNKYKTKKLDFF 720 Query: 303 -------DLFVLPLCRKHHNELHTDTVAFEDK 327 + +PLC+ HH LH ++ DK Sbjct: 721 KFQMASFNQKQVPLCQFHHKSLHQGKLSEADK 752 >UniRef50_Q3S275 ORF718 n=2 Tax=Eukaryota RepID=Q3S275_THAPS Length = 718 Score = 45.2 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 19/100 (19%), Positives = 37/100 (37%), Gaps = 11/100 (11%) Query: 234 SPQEKTVVSITVDPESPESFMKLPKRRRWVKEKYTRWVKTQPCACCGMPAD-DPHHLIGH 292 +K ++ +D S E+++ RR K + PC CG D + HH+ Sbjct: 621 RRPKKFTIAPILDYSSLEAYIDQYDRRVQRGRKDLKG----PCVLCGSNQDIEIHHVRKF 676 Query: 293 GQGGMG------TKAHDLFVLPLCRKHHNELHTDTVAFED 326 + + +P+C+K H ++H + Sbjct: 677 SKTKRKDYLSSMMSRMNRKQVPVCKKCHIKIHQGVYDGKR 716 >UniRef50_A5V9C7 HNH endonuclease n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V9C7_SPHWW Length = 426 Score = 44.8 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 19/84 (22%), Positives = 25/84 (29%), Gaps = 19/84 (22%) Query: 276 CACCG----------MPADDPHHLIGHGQG----GMGTKAHDLFVLPLCRKHHNELHTDT 321 C C D HHL+ G G GT DL +PLC H +H Sbjct: 334 CDVCNLDTARSYPWTERVMDLHHLLPLSSGTRVIGRGTTFDDL--VPLCPSCHRAVHRYY 391 Query: 322 VAFEDKYGSQLELIFRFIDRALAI 345 + D A+ + Sbjct: 392 GEWFRTTKRLDFHSR---DEAVGV 412 >UniRef50_Q21AN9 HNH endonuclease n=1 Tax=Rhodopseudomonas palustris BisB18 RepID=Q21AN9_RHOPB Length = 200 Score = 44.8 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 22/102 (21%), Positives = 35/102 (34%), Gaps = 9/102 (8%) Query: 247 PESPESFMKLPKRRRWVKEKYTRWVKTQPCACCGMPADDPHHLIGHGQGGMGTKAHDLFV 306 P E+ + + Y V T C + A D HH+ GG + Sbjct: 6 PRERENLPLKTRVIVLTETGYRCAVPT--CR--NILALDMHHIWEVSAGGTD---DSSNL 58 Query: 307 LPLCRKHHNELHTDTVAFEDKYGSQLELIFRFIDRALAIGVL 348 + LC H H T+ E Y + ++ I RA + + Sbjct: 59 IALCPTCHALYHRGTIKAESIYVYKSMIVA--ITRAFDVEAI 98 >UniRef50_C7XPL6 Predicted protein n=3 Tax=Fusobacterium RepID=C7XPL6_9FUSO Length = 240 Score = 44.8 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 8/64 (12%) Query: 271 VKTQPCACCGMPADDPHHLIGHGQGGMGTKAH---DLFVLPLCRKHHNELHT--DTVAFE 325 +K + C CG P + H G G K+ + V+ LCR+HH+E + F Sbjct: 151 LKKKICCICGKPG-ELQHFDRV--GSSGYKSDTGLNYRVMCLCREHHDEADNCISRINFM 207 Query: 326 DKYG 329 KY Sbjct: 208 KKYH 211 >UniRef50_B0I1N8 Reverse transcriptase homolog n=2 Tax=Pylaiella littoralis RepID=B0I1N8_PYLLI Length = 796 Score = 44.4 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 8/57 (14%) Query: 275 PCACCGMP-ADDPHHLIGHGQGGMGTKAHDLFV-------LPLCRKHHNELHTDTVA 323 CA CG + HH+ + + T+ + + +PLCR HH LH T++ Sbjct: 716 SCAICGTHDNIEIHHIKSIKKVRVKTRTYAQWTGGFIRKSIPLCRYHHKNLHAGTLS 772 >UniRef50_B2ZY24 HNH endonuclease n=1 Tax=Ralstonia phage RSL1 RepID=B2ZY24_9CAUD Length = 105 Score = 44.4 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 38/104 (36%), Gaps = 9/104 (8%) Query: 216 KQRTKNLAPLPYAHQQQKSPQEKTVVSITVDPESPESFMKLPKRRRWVKEKYTRWVKTQP 275 +R ++ A Y + TV + E ++ KR + E V+ Sbjct: 3 ARRVRSRARNGYGISSIRRDSYSTVNGMNTKAGWWELHRQVEKRSGGLCEARIAGVR--- 59 Query: 276 CACCGMPADDPHHLIGHGQGGMGTKAHDLFVLPLCRKHHNELHT 319 CG D HH++ GG + A+ ++ LC H+ H Sbjct: 60 ---CGKRGKDVHHIVKLSDGGTNSMAN---LIHLCEDCHDRRHN 97 >UniRef50_Q892G1 Conserved protein n=1 Tax=Clostridium tetani RepID=Q892G1_CLOTE Length = 120 Score = 44.4 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 1/40 (2%) Query: 276 CACCGMPADDPHHLIGHGQGGMGTKAHDLFVLPLCRKHHN 315 C CG P + HH++ Q + + ++ LC +HH Sbjct: 4 CKVCGKPNSEKHHIVFRSQQK-ALEHYQYNIMYLCSEHHR 42 >UniRef50_Q3ESS6 Reverse transcriptase / RNA maturase / Endonuclease n=13 Tax=Firmicutes RepID=Q3ESS6_BACTI Length = 607 Score = 44.4 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 14/131 (10%), Positives = 32/131 (24%), Gaps = 13/131 (9%) Query: 203 DIVPGELTATSILKQRTKNLAPLPYAHQQQKSPQEKTVVSITVDPESPESFMKLPKRRRW 262 + E+ +R +Q + + + Sbjct: 479 RVKTKEIRKRYEKNKRFTVTYKTSRGEKQTYFIERSFPREKRSKEANLDLLPATK--YVL 536 Query: 263 VKEKYTRWVKTQPCACCGMPAD--DPHHLIGHGQGGMGTKAH---------DLFVLPLCR 311 + + + +K + C CG HH+ + + LC+ Sbjct: 537 SETRLSDRIKAEQCELCGKTNTIIHMHHVKRLKDIKNKPNKSFLEQRMVSRNRKTIALCK 596 Query: 312 KHHNELHTDTV 322 + H + H V Sbjct: 597 ECHVKRHKGEV 607 >UniRef50_Q97K86 Putative uncharacterized protein n=1 Tax=Clostridium acetobutylicum RepID=Q97K86_CLOAB Length = 140 Score = 44.4 bits (103), Expect = 0.007, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 26/55 (47%), Gaps = 7/55 (12%) Query: 271 VKTQPCACCGMPADDPHHLIGHGQGGMGTKAHDLFVLPLCRKHHNEL---HTDTV 322 ++ + C CG + HH++ QGG+ + ++ LC +HH + H D Sbjct: 1 MRGEKCVVCGKDG-ERHHIVYKSQGGLDFPLNYVY---LCDEHHRGINGPHKDRK 51 >UniRef50_Q92B13 Lin1740 protein n=4 Tax=root RepID=Q92B13_LISIN Length = 186 Score = 44.0 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 26/62 (41%), Gaps = 4/62 (6%) Query: 271 VKTQPCACCGMPADDPHHLIGHGQGGMGTKAHD--LFVLPLCRKHHNELHT-DTVAFEDK 327 +K + CA G + HH+ G G ++ L R+ H E H + F++K Sbjct: 110 IKYRKCAITGRRG-EIHHVDSLGAGRDRRNYDHSKSRLICLSREMHTEAHQIGWLTFKNK 168 Query: 328 YG 329 Y Sbjct: 169 YH 170 >UniRef50_Q312Y0 HNH nuclease n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q312Y0_DESDG Length = 260 Score = 43.7 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 23/137 (16%), Positives = 38/137 (27%), Gaps = 20/137 (14%) Query: 197 SVYRESDIVPGELTATSILKQRTKNLAPLPYAHQQQKSPQEKTVVSITVDPESPESFMKL 256 + + P + R A +T+ + F + Sbjct: 123 AGFAVRAFEPESVQWPDE-DVRLAIRQLQQAADTDPGDDAAETLCPPGMTVREQAVFRRS 181 Query: 257 PKRRRWVKEKYTRWVKTQPCACCGMPA-----------DDPHHLIGHGQGGMGTKAHDLF 305 P V + + C CCG PA + HH+ +GG T A+ Sbjct: 182 PVVAARVLLRAGGF-----CECCGAPAPFVSRADNLPYLEVHHVRPLAEGGADTPAN--- 233 Query: 306 VLPLCRKHHNELHTDTV 322 + LC H + H Sbjct: 234 CMALCPNCHRQFHYGIK 250 >UniRef50_Q1AV28 Adenine-specific DNA methylase containing a Zn-ribbon-like protein n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AV28_RUBXD Length = 703 Score = 43.7 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 18/98 (18%), Positives = 24/98 (24%), Gaps = 8/98 (8%) Query: 222 LAPLPYAHQQQKSPQEKTVVSITVDPESPESFMKLPKRRRWVKEKYTRWVKTQPCACCGM 281 + P E E + P + WV+ CA CG Sbjct: 115 ITRFETRAAGFPDPGEALERLKREVGERVAPYYLTPTPEGERVVLHYFWVQVVRCAGCGE 174 Query: 282 PAD-DPHHLIGHGQGGMGTKAHDLFVLPLCRKHHNELH 318 + PHH + GG A C H Sbjct: 175 EVEAHPHHRLACEAGGRRQWA-------FCPGCHRVQE 205 >UniRef50_A9BU78 HNH endonuclease n=4 Tax=Burkholderiales RepID=A9BU78_DELAS Length = 330 Score = 43.7 bits (101), Expect = 0.012, Method: Composition-based stats. Identities = 22/85 (25%), Positives = 31/85 (36%), Gaps = 18/85 (21%) Query: 251 ESFMKLPKRRRWVKEKYTRWVKTQPCACC----------GMPADDPHHLIGHGQGGMGTK 300 F + P + WV +K C CC G P + HH+ +GG T Sbjct: 239 AQFERDPAVKAWVLKK-----AAGVCECCSSNAPFESTDGQPFLEVHHIRKLAEGGSDTV 293 Query: 301 AHDLFVLPLCRKHHNELHTDTVAFE 325 ++ + LC H LH A E Sbjct: 294 SN---TVALCPNCHRALHYGMRAKE 315 >UniRef50_C0ZFI2 Putative uncharacterized protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZFI2_BREBN Length = 360 Score = 43.3 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 39/241 (16%), Positives = 82/241 (34%), Gaps = 30/241 (12%) Query: 129 TSESLELLAQQ-------NLTAWVIDVIRHAISGTQERELSLAELSWWAVCNQVVDALPE 181 + ++ +A+ + T + + I S T + + A + + DAL Sbjct: 115 PKKKMKQIAENIRQSLDIDRTIFPNESIDLKASTTNAKNYTAAHIC-----GKYYDALAL 169 Query: 182 AVSRRSLGLPAEKICSVYRESDIV---PGELTATSILKQRTKNLAPLPYAHQQQKSPQEK 238 + L + + + +Y + I G Q+ + + Q P Sbjct: 170 PDDEQ-LKVDLKNLLKIYEQLKIQMAGRGTEEMLDYYLQKEEIEDTQFQSDVQVAEPSNT 228 Query: 239 TVVSITVDPESPESFMKLPKR------RRWVKEKYTRWVK----TQPCACCGMPADDPHH 288 +V V P+ + + KR E Y V + A + HH Sbjct: 229 PLVPQPVPPQVESNGKQQWKRNASIAKEALRNEDYLCEVNNGHLSFTSAITNKNFVEAHH 288 Query: 289 LIGHGQGGMGTKAHDL--FVLPLCRKHHNELHTDTVAFEDKYGSQLELIFRFIDRALAIG 346 LI + + + D+ ++ LC H ++H + + E K ++ + I+R + G Sbjct: 289 LIPMKLQALFSWSLDVPGNIVSLCPNCHRKIHHASKS-ERKELIEVLYSKK-INRLKSFG 346 Query: 347 V 347 + Sbjct: 347 I 347 >UniRef50_Q0S297 Putative uncharacterized protein n=1 Tax=Rhodococcus jostii RHA1 RepID=Q0S297_RHOSR Length = 107 Score = 43.3 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 20/93 (21%), Positives = 38/93 (40%), Gaps = 5/93 (5%) Query: 238 KTVVSITVDPESPESFMKLPKRRRWVKEKYTRWVKTQPCACCGMPADDPHHLIGHGQGGM 297 TV ++ P+ RR + ++ + T C CCG P HL + Sbjct: 2 SVPGRATVTTAEYRRYINSPEWRRTRERYWSSKLPT-DCYCCGRPRHPGMHLHHRTYKNL 60 Query: 298 GTKAHDLFVLPLCRKHHNEL---HTDTVAFEDK 327 G + + ++P+C + H+E+ H ++ K Sbjct: 61 GAER-LMDLVPVCAECHDEIHRLHRGDPRWKSK 92 >UniRef50_D2PYV9 HNH endonuclease n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PYV9_9ACTO Length = 614 Score = 42.9 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 19/128 (14%), Positives = 37/128 (28%), Gaps = 7/128 (5%) Query: 198 VYRESDIVPGELTATSILKQRTKNLAPLPYAHQQQKSPQEKTVVSITVDPESPESFMKLP 257 + I +L + A ++ + + D E + Sbjct: 265 PHVTVTIALNDLATATGTGTLASGTTLSAGAIRRLACDAGLIPIVLGTDSEPLDVG--TH 322 Query: 258 KRRRWVKEKYTRWVKTQPCACCGMPAD--DPHHLIGHGQGGMGTKAHDLFVLPLCRKHHN 315 R ++ + + C C P + HH++ GG + LCR HH Sbjct: 323 HRFVTRPIRHALNARDKGCIICTAPPAMCEAHHIVHWANGG---PTALTNLALLCRPHHT 379 Query: 316 ELHTDTVA 323 ++H Sbjct: 380 DVHQGHYT 387 >UniRef50_C0N619 HNH endonuclease domain protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N619_9GAMM Length = 274 Score = 42.9 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 20/126 (15%), Positives = 37/126 (29%), Gaps = 25/126 (19%) Query: 205 VPGELTATSILKQRTKNLAPLPYAHQQQKSPQEKTVVSITVDPESPESFMKLPKRRRWVK 264 +PG T T ++ + + + + + + Sbjct: 138 IPGSSTTTISTFSPKDLRKKSLLELREAALEKPSHTKNAS----------ERRQSAYYRS 187 Query: 265 EKYTRWVKTQ---PCACCGMPA---------DDPHHLIGHGQGGMGTKAHDLFVLPLCRK 312 + +V+ + C C +PA + HHL GG H + V+ LC Sbjct: 188 KALRLYVRKRAGGKCEACAVPAPFESRKGPYIECHHLHRVADGG---PDHPMNVIGLCPN 244 Query: 313 HHNELH 318 H H Sbjct: 245 CHRRAH 250 >UniRef50_B9MNI0 HNH endonuclease n=2 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MNI0_ANATD Length = 471 Score = 42.5 bits (98), Expect = 0.023, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 22/52 (42%), Gaps = 4/52 (7%) Query: 272 KTQPCACCG-MPADDPHHLIGHGQGGMGTKAHDLFVLPLCRKHHNELHTDTV 322 + C CG HHLI GG + + ++ LCR H ++H V Sbjct: 209 AEKKCIICGTEDNLQKHHLIQRKCGGTDVQENLVY---LCRDCHEDVHAGRV 257 >UniRef50_UPI0001C369A3 hypothetical protein ChatD1_02366 n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C369A3 Length = 101 Score = 42.1 bits (97), Expect = 0.027, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 30/78 (38%), Gaps = 8/78 (10%) Query: 276 CACCGMPADDPHHLIGHGQGGMGTKAHDLFVLPLCRKHHNE------LHTDTVAFE-DKY 328 C CG PAD HHLI G D +P+C H +H + +A + K Sbjct: 12 CFFCGRPADCEHHLIF-GSANRELADEDCLKVPICNNCHTAGKVNSRIHDNPMAEKLSKM 70 Query: 329 GSQLELIFRFIDRALAIG 346 Q+ + + +G Sbjct: 71 LGQMAYEKELALKMVPMG 88 >UniRef50_C6P1I9 Putative uncharacterized protein n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1I9_9PROT Length = 85 Score = 42.1 bits (97), Expect = 0.027, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 32/80 (40%), Gaps = 14/80 (17%) Query: 267 YTRWVKTQPCACCGMP-ADDPHHLIGHGQGGMGTKAHDLFVLPLCRKHHN----ELHTDT 321 + V++ PC+ C MP + HH+ ++ + + LC H H Sbjct: 12 HIDRVRSLPCSVCDMPGPSEAHHI---------SQDNPWTAVALCTDCHRHPKDGWHGQR 62 Query: 322 VAFEDKYGSQLELIFRFIDR 341 + ++ K +++ + I R Sbjct: 63 LIWKVKKMVEIDALGVTIKR 82 >UniRef50_Q7WLR3 Putative uncharacterized protein n=1 Tax=Bordetella bronchiseptica RepID=Q7WLR3_BORBR Length = 164 Score = 42.1 bits (97), Expect = 0.028, Method: Composition-based stats. Identities = 23/146 (15%), Positives = 38/146 (26%), Gaps = 16/146 (10%) Query: 215 LKQRTKNLAPLPYAHQQQKSPQEKTVVSITVDPESPESFMK------LPKRRRWVKEKYT 268 + +RT P + + P + MK P + + Sbjct: 1 MMRRTPLTRKAPMKRGEALR--SAVPMMRATPMPPPRAAMKARKRGKKPPKTIYRNPALL 58 Query: 269 RWVKTQPCAC-----CG---MPADDPHHLIGHGQGGMGTKAHDLFVLPLCRKHHNELHTD 320 + + C C H G G KAHD + C H + Sbjct: 59 ALAEGENCLLRVPKYCQGGTDSTVACHSNRLRDGKGKGIKAHDWAIAFGCSGCHWFIDES 118 Query: 321 TVAFEDKYGSQLELIFRFIDRALAIG 346 E K + + R +A+G Sbjct: 119 KAPLELKLSYFIPGMRLTRLRIIAMG 144 >UniRef50_D1S1E3 HNH nuclease n=1 Tax=Micromonospora aurantiaca ATCC 27029 RepID=D1S1E3_9ACTO Length = 496 Score = 42.1 bits (97), Expect = 0.032, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 34/110 (30%), Gaps = 13/110 (11%) Query: 240 VVSITVDPESPESFMKLPKRRRWVKEKYTRWVKTQPCACCG-------MPADDPHHLIGH 292 + + DP + R K + + C CG + H+ G Sbjct: 364 TPTGSGDPAERKLVTVDRIVRSSRYAKAVKRLYDHRCQICGVRLATRDGYYSEAAHIRGL 423 Query: 293 GQGGMGTKAHDLFVLPLCRKHHNELHTDTVAFEDKYGSQLELIFRFIDRA 342 G+ GT +L LC HH + F Y + + R D + Sbjct: 424 GKPHDGTD-DLSNLLCLCPNHHTQFD-----FFALYVDEKFTVRRTSDDS 467 >UniRef50_D0YT08 Putative uncharacterized protein n=1 Tax=Mobiluncus mulieris 28-1 RepID=D0YT08_9ACTO Length = 122 Score = 41.7 bits (96), Expect = 0.036, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 8/52 (15%) Query: 272 KTQPCACCGMP----ADDPHHLIGHGQGGMGTKAHDLFVLPLCRKHHNELHT 319 C CG P D HHL + +G +A+D ++PLCR H LH+ Sbjct: 47 AQLSCLGCGAPWTARRGDLHHLTYN---RIGNEAYDD-LIPLCRGCHALLHS 94 >UniRef50_A9AUN7 RNA-directed DNA polymerase n=4 Tax=Bacteria RepID=A9AUN7_HERA2 Length = 595 Score = 41.7 bits (96), Expect = 0.043, Method: Composition-based stats. Identities = 21/123 (17%), Positives = 38/123 (30%), Gaps = 12/123 (9%) Query: 211 ATSILKQRTKNLAPLPYAHQQQKSPQEKTVVSITVDPESPESFMKLPKRRRWVKEKYTRW 270 AT L + L + Q + P I++ + P + V + + Sbjct: 465 ATQQLPDGRRMLCIRVFVEQPARPPLIAQFGGISLRRNPMAILNERPPQLWNVGTEIIQR 524 Query: 271 VKTQPCACCGMPAD-DPHHLIGHGQGGMGTKAH-----------DLFVLPLCRKHHNELH 318 +K Q C CG D + HH+ + L +C + H+ +H Sbjct: 525 LKAQECELCGSHEDVEVHHIRRLANLKRSGRTEKPQWMQRMITRQRKTLVVCSQCHHRIH 584 Query: 319 TDT 321 Sbjct: 585 AGK 587 >UniRef50_C0WRI9 Possible HNH endonuclease n=1 Tax=Lactobacillus buchneri ATCC 11577 RepID=C0WRI9_LACBU Length = 193 Score = 41.3 bits (95), Expect = 0.058, Method: Composition-based stats. Identities = 19/132 (14%), Positives = 39/132 (29%), Gaps = 20/132 (15%) Query: 204 IVPGELTATSILKQRTKNLAPLPYAHQQQKSPQEKTVVSITVDPESPESFMKLPKRRR-- 261 I P + + + Q K K ++ E ++ + Sbjct: 38 IRPIKHLDKVHIANKEVLHQSEIKQEQAVKKMPIKKLIESVKTHEQGKTAKTSCREVTTT 97 Query: 262 ----WVKEKYTRWVKTQP-CACCGMPA----------DDPHHLIGHGQGGMGTKAHDLFV 306 ++ ++ C CG PA + HH+ QGG ++ Sbjct: 98 MFVRNANNRHLALYFSKGVCQLCGEPAPFKDKTGQPYLEVHHIDWFSQGGKDVIENE--- 154 Query: 307 LPLCRKHHNELH 318 + +C H ++H Sbjct: 155 IAICPNCHRKMH 166 >UniRef50_A9WRB3 HNH endonuclease domain protein n=2 Tax=Renibacterium salmoninarum ATCC 33209 RepID=A9WRB3_RENSM Length = 452 Score = 41.0 bits (94), Expect = 0.059, Method: Composition-based stats. Identities = 35/177 (19%), Positives = 68/177 (38%), Gaps = 9/177 (5%) Query: 170 AVCNQVVDALPEAVSRRSLGLPAEKICSV-YRESDIVPGELTATSILKQRTKNLAPLPYA 228 +V + + AL V + G + +V YR+ E S ++QR+ P Sbjct: 262 SVISALGSALTAEVLPGTGGHRPQVHVTVDYRQLLAEIHESENESAVQQRSTAQFTGPIG 321 Query: 229 HQQQKSPQEKTVVSITVDPESPESFMKLPKRRRWVKEKYTRWV-KTQPCAC--CGMPAD- 284 ++ + V ++ E ++R + + + V + Q CA C +P+ Sbjct: 322 AHNIRTIACDAELIPVVLGDTGEILDVGRRKRFFSRSQRAALVARDQGCAFPSCSIPSSW 381 Query: 285 -DPHHLIGHGQGGMGTKAHDLFVLPLCRKHHNELHTDTVAFEDKYGSQLELIFRFID 340 + HH+ GG + + LC HH+ +H + E++ G +ID Sbjct: 382 CEAHHIRWWQHGG---ETSTSNGVLLCSHHHHLIHQGKWSIENRTGRPEFRPPPWID 435 >UniRef50_A8ZK69 Putative uncharacterized protein n=1 Tax=Acaryochloris marina MBIC11017 RepID=A8ZK69_ACAM1 Length = 257 Score = 41.0 bits (94), Expect = 0.059, Method: Composition-based stats. Identities = 20/144 (13%), Positives = 38/144 (26%), Gaps = 12/144 (8%) Query: 186 RSLGLPAEKICSVYRESDIVPGELTATSILKQRTKNLAPLPYAHQQQKSPQEKTVVSITV 245 R L L A++ Y+ + ++ + + K + K +T+ Sbjct: 18 RVLELEAKRKAKGYQPGWLYYQCKPL-GLVDVMESLRSQGLIEAKNTKEGKAKPRQLLTI 76 Query: 246 DPESPESFMKLP-----KRRRWVKEKYTRWVKTQPCACCG----MPADDPHHLIGHGQGG 296 + + K K T C CG + H + + Sbjct: 77 ELVPRSCWFSNVRSEVSKEDWNELRKMTYEKANNRCEVCGGRGPKHPVECHEIWHYDDDQ 136 Query: 297 MGTKAHDLFVLPLCRKHHNELHTD 320 K ++ LC H H Sbjct: 137 HIQKLE--GLIALCPSCHEVKHRG 158 >UniRef50_D2S1X8 HNH endonuclease n=1 Tax=Haloterrigena turkmenica DSM 5511 RepID=D2S1X8_9EURY Length = 84 Score = 40.6 bits (93), Expect = 0.085, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 20/67 (29%), Gaps = 13/67 (19%) Query: 265 EKYTRWVKTQPCACCGMPA----------DDPHHLIGHGQGGMGTKAHDLFVLPLCRKHH 314 KY V C C A + HHL GG + V+ LC H Sbjct: 2 RKYALQVADGVCQGCSDDAPFLTDDRESFLEVHHLRRRSNGGADHPKN---VIALCPNCH 58 Query: 315 NELHTDT 321 +H Sbjct: 59 RRVHHGR 65 >UniRef50_Q7WGQ9 Putative uncharacterized protein n=1 Tax=Bordetella bronchiseptica RepID=Q7WGQ9_BORBR Length = 150 Score = 40.6 bits (93), Expect = 0.093, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 25/61 (40%), Gaps = 9/61 (14%) Query: 259 RRRWVKEKYTRWVKTQPCACCGMPADDPHHLIGHGQGGMGTKAHDLFVLPLCRKHHNELH 318 RR+ E + PC CG D HH + A L V LC++HH ELH Sbjct: 92 RRKLRHEVEMGRIVPLPCEVCGDTPTDGHH---------ASYALPLAVTWLCKQHHQELH 142 Query: 319 T 319 Sbjct: 143 A 143 >UniRef50_C8X6A2 Putative uncharacterized protein n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8X6A2_NAKMY Length = 120 Score = 40.6 bits (93), Expect = 0.093, Method: Composition-based stats. Identities = 22/125 (17%), Positives = 44/125 (35%), Gaps = 17/125 (13%) Query: 221 NLAPLPYAHQQQKSPQEKTVVSITVDPESPESFMKLPKRRRWVKEKYTRWVKTQPCACCG 280 P P + + + + ++ + + + R W + C CG Sbjct: 1 MRPPRPGSAWRPSRWARRGWYADYMNSPAWVARKRQWFREHWEQTHQPAA-----CVICG 55 Query: 281 MPADDPHHLIGHGQGGMGTKAHDLFVLPLCRKHHNELHTDTVAFEDKYGSQLELIFRFID 340 D HH+ +G+ G + ++ LCR HH+ +H A++ + R Sbjct: 56 RRPVDLHHMD-YGRLGNEKNSD---IICLCRAHHDRMHA---AWDAT-----PHLRRLGR 103 Query: 341 RALAI 345 RA + Sbjct: 104 RAATV 108 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.307 0.122 0.342 Lambda K H 0.267 0.0380 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,480,632,177 Number of Sequences: 3077464 Number of extensions: 44570952 Number of successful extensions: 196540 Number of sequences better than 1.0e-01: 121 Number of HSP's better than 0.1 without gapping: 74 Number of HSP's successfully gapped in prelim test: 169 Number of HSP's that attempted gapping in prelim test: 196092 Number of HSP's gapped (non-prelim): 275 length of query: 349 length of database: 1,040,396,356 effective HSP length: 129 effective length of query: 220 effective length of database: 643,403,500 effective search space: 141548770000 effective search space used: 141548770000 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 93 (40.5 bits)