Phyre 2 Results for P0CE45

Email | l.a.kelley@imperial.ac.uk
Description | P0CE45
Date | Thu Jan 5 11:30:13 GMT 2012
Unique Job ID | 6bb8930fbc257fae

Detailed template information |

# | Template | Alignment Coverage | 3D Model | Confidence | % i.d. | Template Information
--- | --- | --- | --- | --- | --- | ---
1 | d1pv7a_ |
|  | 99.9 | 12 | Fold:MFS general substrate transporter Superfamily:MFS general substrate transporter Family:LacY-like proton/sugar symporter
2 | d1pw4a_ |
|  | 99.9 | 13 | Fold:MFS general substrate transporter Superfamily:MFS general substrate transporter Family:Glycerol-3-phosphate transporter
3 | c2gfpA_ |
|  | 99.8 | 12 | PDB header:membrane protein Chain: A: PDB Molecule:multidrug resistance protein d; PDBTitle: structure of the multidrug transporter emrd from2 escherichia coli
4 | c3o7pA_ |
|  | 99.8 | 13 | PDB header:transport protein Chain: A: PDB Molecule:l-fucose-proton symporter; PDBTitle: crystal structure of the e.coli fucose:proton symporter, fucp (n162a)
5 | c2xutC_ |
|  | 99.8 | 11 | PDB header:transport protein Chain: C: PDB Molecule:proton/peptide symporter family protein; PDBTitle: crystal structure of a proton dependent oligopeptide (pot)2 family transporter.
6 | d2f23a1 |
|  | 62.4 | 10 | Fold:Long alpha-hairpin Superfamily:GreA transcript cleavage protein, N-terminal domain Family:GreA transcript cleavage protein, N-terminal domain
7 | d1grja1 |
|  | 50.2 | 24 | Fold:Long alpha-hairpin Superfamily:GreA transcript cleavage protein, N-terminal domain Family:GreA transcript cleavage protein, N-terminal domain
8 | c3qnqD_ |
|  | 49.6 | 14 | PDB header:membrane protein, transport protein Chain: D: PDB Molecule:pts system, cellobiose-specific iic component; PDBTitle: crystal structure of the transporter chbc, the iic component from the2 n,n'-diacetylchitobiose-specific phosphotransferase system
9 | c1zxaB_ |
|  | 32.9 | 19 | PDB header:transferase Chain: B: PDB Molecule:cgmp-dependent protein kinase 1, alpha isozyme; PDBTitle: solution structure of the coiled-coil domain of cgmp-2 dependent protein kinase ia
10 | c1by0A_ |
|  | 29.6 | 28 | PDB header:rna binding protein Chain: A: PDB Molecule:protein (hepatitis delta antigen); PDBTitle: n-terminal leucine-repeat region of hepatitis delta antigen
11 | c2q7cC_ |
|  | 25.0 | 22 | PDB header:viral protein Chain: C: PDB Molecule:fusion protein between yeast variant gcn4 and PDBTitle: crystal structure of iqn17
12 | d1f6ga_ |
|  | 24.9 | 13 | Fold:Voltage-gated potassium channels Superfamily:Voltage-gated potassium channels Family:Voltage-gated potassium channels
13 | c3hd6A_ |
|  | 23.7 | 7 | PDB header:membrane protein, transport protein Chain: A: PDB Molecule:ammonium transporter rh type c; PDBTitle: crystal structure of the human rhesus glycoprotein rhcg
14 | d1oqwa_ |
|  | 20.4 | 13 | Fold:Pili subunits Superfamily:Pili subunits Family:Pilin
15 | d1xmpa_ |
|  | 19.7 | 10 | Fold:Flavodoxin-like Superfamily:N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) Family:N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
16 | d2h8aa1 |
|  | 17.4 | 7 | Fold:MAPEG domain-like Superfamily:MAPEG domain-like Family:MAPEG domain
17 | d2pila_ |
|  | 17.1 | 9 | Fold:Pili subunits Superfamily:Pili subunits Family:Pilin
18 | c3jqhA_ |
|  | 13.8 | 24 | PDB header:sugar binding protein Chain: A: PDB Molecule:c-type lectin domain family 4 member m; PDBTitle: structure of the neck region of the glycan-binding receptor2 dc-signr
19 | d1ji6a3 |
|  | 13.3 | 14 | Fold:Toxins' membrane translocation domains Superfamily:delta-Endotoxin (insectocide), N-terminal domain Family:delta-Endotoxin (insectocide), N-terminal domain
20 | c2hjmB_ |
|  | 12.8 | 10 | PDB header:structural genomics, unknown function Chain: B: PDB Molecule:hypothetical protein pf1176; PDBTitle: crystal structure of a singleton protein pf1176 from p. furiosus
21 | d2ce7a1 |
| not modelled | 12.0 | 13 | Fold:FtsH protease domain-like Superfamily:FtsH protease domain-like Family:FtsH protease domain-like
22 | c1a92B_ |
| not modelled | 11.8 | 29 | PDB header:leucine zipper Chain: B: PDB Molecule:delta antigen; PDBTitle: oligomerization domain of hepatitis delta antigen
23 | c1m46B_ |
| not modelled | 11.7 | 29 | PDB header:cell cycle protein Chain: B: PDB Molecule:iq4 motif from myo2p, a class v myosin; PDBTitle: crystal structure of mlc1p bound to iq4 of myo2p, a class v2 myosin
24 | c2nuxB_ |
| not modelled | 11.5 | 35 | PDB header:lyase Chain: B: PDB Molecule:2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho gluconate PDBTitle: 2-keto-3-deoxygluconate aldolase from sulfolobus acidocaldarius,2 native structure in p6522 at 2.5 a resolution
25 | c2oqqB_ |
| not modelled | 11.5 | 16 | PDB header:transcription Chain: B: PDB Molecule:transcription factor hy5; PDBTitle: crystal structure of hy5 leucine zipper homodimer from2 arabidopsis thaliana
26 | c3eh0C_ |
| not modelled | 10.4 | 8 | PDB header:transferase Chain: C: PDB Molecule:udp-3-o-[3-hydroxymyristoyl] glucosamine n- PDBTitle: crystal structure of lpxd from escherichia coli
27 | d1u69a_ |
| not modelled | 9.6 | 27 | Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:3-demethylubiquinone-9 3-methyltransferase
28 | c2wl2B_ |
| not modelled | 9.2 | 11 | PDB header:isomerase Chain: B: PDB Molecule:dna gyrase subunit a; PDBTitle: crystal structure of n-terminal domain of gyra with the2 antibiotic simocyclinone d8
29 | c2xseA_ |
| not modelled | 9.2 | 21 | PDB header:oxidoreductase Chain: A: PDB Molecule:thymine dioxygenase jbp1; PDBTitle: the structural basis for recognition of j-base containing2 dna by a novel dna-binding domain in jbp1
30 | c1c94B_ |
| not modelled | 8.8 | 15 | PDB header:gene regulation Chain: B: PDB Molecule:retro-gcn4 leucine zipper; PDBTitle: reversing the sequence of the gcn4 leucine zipper does not2 affect its fold.
31 | c2kncA_ |
| not modelled | 8.8 | 13 | PDB header:cell adhesion Chain: A: PDB Molecule:integrin alpha-iib; PDBTitle: platelet integrin alfaiib-beta3 transmembrane-cytoplasmic2 heterocomplex
32 | c1l4aE_ |
| not modelled | 8.7 | 22 | PDB header:endocytosis/exocytosis Chain: E: PDB Molecule:synaphin a; PDBTitle: x-ray structure of the neuronal complexin/snare complex2 from the squid loligo pealei
33 | c3s2xB_ |
| not modelled | 8.5 | 23 | PDB header:transferase Chain: B: PDB Molecule:acetyl-coa synthase subunit alpha; PDBTitle: structure of acetyl-coenzyme a synthase alpha subunit c-terminal2 domain
34 | d2ia9a1 |
| not modelled | 8.5 | 7 | Fold:SpoVG-like Superfamily:SpoVG-like Family:SpoVG-like
35 | d1ab4a_ |
| not modelled | 8.4 | 13 | Fold:Type II DNA topoisomerase Superfamily:Type II DNA topoisomerase Family:Type II DNA topoisomerase
36 | c2l5gA_ |
| not modelled | 8.3 | 9 | PDB header:transcription regulator Chain: A: PDB Molecule:g protein pathway suppressor 2; PDBTitle: co-ordinates and 1h, 13c and 15n chemical shift assignments for the2 complex of gps2 53-90 and smrt 167-207
37 | c1ji6A_ |
| not modelled | 8.1 | 14 | PDB header:toxin Chain: A: PDB Molecule:pesticidial crystal protein cry3bb; PDBTitle: crystal structure of the insecticidal bacterial del2 endotoxin cry3bb1 bacillus thuringiensis
38 | d2oara1 |
| not modelled | 8.1 | 18 | Fold:Gated mechanosensitive channel Superfamily:Gated mechanosensitive channel Family:Gated mechanosensitive channel
39 | c3sokB_ |
| not modelled | 7.9 | 17 | PDB header:cell adhesion Chain: B: PDB Molecule:fimbrial protein; PDBTitle: dichelobacter nodosus pilin fima
40 | d1ez4a2 |
| not modelled | 7.6 | 23 | Fold:LDH C-terminal domain-like Superfamily:LDH C-terminal domain-like Family:Lactate & malate dehydrogenases, C-terminal domain
41 | d1ykhb1 |
| not modelled | 7.4 | 8 | Fold:Mediator hinge subcomplex-like Superfamily:Mediator hinge subcomplex-like Family:CSE2-like
42 | c2novD_ |
| not modelled | 7.4 | 21 | PDB header:isomerase Chain: D: PDB Molecule:dna topoisomerase 4 subunit a; PDBTitle: breakage-reunion domain of s.pneumoniae topo iv: crystal2 structure of a gram-positive quinolone target
43 | c2kluA_ |
| not modelled | 7.3 | 10 | PDB header:immune system, membrane protein Chain: A: PDB Molecule:t-cell surface glycoprotein cd4; PDBTitle: nmr structure of the transmembrane and cytoplasmic domains2 of human cd4
44 | c1tjlD_ |
| not modelled | 7.2 | 0 | PDB header:transcription Chain: D: PDB Molecule:dnak suppressor protein; PDBTitle: crystal structure of transcription factor dksa from e. coli
45 | c2rdcA_ |
| not modelled | 7.1 | 10 | PDB header:lipid binding protein Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of a putative lipid binding protein (gsu0061) from2 geobacter sulfurreducens pca at 1.80 a resolution
46 | c2kwyA_ |
| not modelled | 7.1 | 19 | PDB header:proton transport Chain: A: PDB Molecule:v-type proton atpase subunit g; PDBTitle: structure of g61-101
47 | c3iz5K_ |
| not modelled | 7.1 | 11 | PDB header:ribosome Chain: K: PDB Molecule:60s ribosomal protein l13a (l13p); PDBTitle: localization of the large subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome
48 | c3onoA_ |
| not modelled | 7.1 | 14 | PDB header:isomerase Chain: A: PDB Molecule:ribose/galactose isomerase; PDBTitle: crystal structure of ribose-5-phosphate isomerase lacab_rpib from2 vibrio parahaemolyticus
49 | c2kmfA_ |
| not modelled | 7.1 | 16 | PDB header:photosynthesis Chain: A: PDB Molecule:photosystem ii 11 kda protein; PDBTitle: solution structure of psb27 from cyanobacterial photosystem2 ii
50 | c2y6xA_ |
| not modelled | 7.0 | 20 | PDB header:photosynthesis Chain: A: PDB Molecule:photosystem ii 11 kd protein; PDBTitle: structure of psb27 from thermosynechococcus elongatus
51 | d1otsa_ |
| not modelled | 6.9 | 13 | Fold:Clc chloride channel Superfamily:Clc chloride channel Family:Clc chloride channel
52 | c2w8aC_ |
| not modelled | 6.7 | 8 | PDB header:membrane protein Chain: C: PDB Molecule:glycine betaine transporter betp; PDBTitle: crystal structure of the sodium-coupled glycine betaine2 symporter betp from corynebacterium glutamicum with bound3 substrate
53 | d2cqea1 |
| not modelled | 6.7 | 10 | Fold:CCCH zinc finger Superfamily:CCCH zinc finger Family:CCCH zinc finger
54 | c2jo8B_ |
| not modelled | 6.6 | 25 | PDB header:transferase Chain: B: PDB Molecule:serine/threonine-protein kinase 4; PDBTitle: solution structure of c-terminal domain of human mammalian2 sterile 20-like kinase 1 (mst1)
55 | d2ba0d2 |
| not modelled | 6.6 | 15 | Fold:Ribonuclease PH domain 2-like Superfamily:Ribonuclease PH domain 2-like Family:Ribonuclease PH domain 2-like
56 | c2zxrA_ |
| not modelled | 6.5 | 12 | PDB header:hydrolase Chain: A: PDB Molecule:single-stranded dna specific exonuclease recj; PDBTitle: crystal structure of recj in complex with mg2+ from thermus2 thermophilus hb8
57 | d1fx0a1 |
| not modelled | 6.4 | 11 | Fold:Left-handed superhelix Superfamily:C-terminal domain of alpha and beta subunits of F1 ATP synthase Family:C-terminal domain of alpha and beta subunits of F1 ATP synthase
58 | d2jf2a1 |
| not modelled | 6.4 | 13 | Fold:Single-stranded left-handed beta-helix Superfamily:Trimeric LpxA-like enzymes Family:UDP N-acetylglucosamine acyltransferase
59 | c1onvB_ |
| not modelled | 6.1 | 22 | PDB header:transcription Chain: B: PDB Molecule:serine phosphatase fcp1a; PDBTitle: nmr structure of a complex containing the tfiif subunit2 rap74 and the rnap ii ctd phosphatase fcp1
60 | d2b5ua2 |
| not modelled | 6.1 | 17 | Fold:Cloacin translocation domain Superfamily:Cloacin translocation domain Family:Cloacin translocation domain
61 | d1h41a2 |
| not modelled | 6.0 | 20 | Fold:Zincin-like Superfamily:beta-N-acetylhexosaminidase-like domain Family:alpha-D-glucuronidase, N-terminal domain
62 | d1hyha2 |
| not modelled | 5.9 | 10 | Fold:LDH C-terminal domain-like Superfamily:LDH C-terminal domain-like Family:Lactate & malate dehydrogenases, C-terminal domain
63 | c2q9qC_ |
| not modelled | 5.8 | 7 | PDB header:replication Chain: C: PDB Molecule:dna replication complex gins protein psf1; PDBTitle: the crystal structure of full length human gins complex
64 | c2l16A_ |
| not modelled | 5.8 | 15 | PDB header:protein transport Chain: A: PDB Molecule:sec-independent protein translocase protein tatad; PDBTitle: solution structure of bacillus subtilits tatad protein in dpc micelles
65 | c2rpaA_ |
| not modelled | 5.8 | 24 | PDB header:hydrolase Chain: A: PDB Molecule:katanin p60 atpase-containing subunit a1; PDBTitle: the solution structure of n-terminal domain of microtubule severing2 enzyme
66 | c2xzrA_ |
| not modelled | 5.7 | 21 | PDB header:cell adhesion Chain: A: PDB Molecule:immunoglobulin-binding protein eibd; PDBTitle: escherichia coli immunoglobulin-binding protein eibd 391-438 fused2 to gcn4 adaptors
67 | c2inrA_ |
| not modelled | 5.7 | 24 | PDB header:isomerase Chain: A: PDB Molecule:dna topoisomerase 4 subunit a; PDBTitle: crystal structure of a 59 kda fragment of topoisomerase iv subunit a2 (grla) from staphylococcus aureus
68 | c2k6iA_ |
| not modelled | 5.7 | 18 | PDB header:structural protein Chain: A: PDB Molecule:uncharacterized protein mj0223; PDBTitle: the domain features of the peripheral stalk subunit h of the2 methanogenic a1ao atp synthase and the nmr solution3 structure of h1-47
69 | c1zvuA_ |
| not modelled | 5.6 | 18 | PDB header:isomerase Chain: A: PDB Molecule:topoisomerase iv subunit a; PDBTitle: structure of the full-length e. coli parc subunit
70 | c1unyA_ |
| not modelled | 5.6 | 9 | PDB header:four helix bundle Chain: A: PDB Molecule:general control protein gcn4; PDBTitle: structure based engineering of internal molecular surfaces2 of four helix bundles
71 | c2c5qE_ |
| not modelled | 5.4 | 23 | PDB header:structural genomics,unknown function Chain: E: PDB Molecule:rraa-like protein yer010c; PDBTitle: crystal structure of yeast yer010cp
72 | c3izcK_ |
| not modelled | 5.4 | 21 | PDB header:ribosome Chain: K: PDB Molecule:60s ribosomal protein rpl16 (l13p); PDBTitle: localization of the large subunit ribosomal proteins into a 6.1 a2 cryo-em map of saccharomyces cerevisiae translating 80s ribosome
73 | c2hw2A_ |
| not modelled | 5.4 | 7 | PDB header:transferase Chain: A: PDB Molecule:rifampin adp-ribosyl transferase; PDBTitle: crystal structure of rifampin adp-ribosyl transferase in2 complex with rifampin
74 | c2rddB_ |
| not modelled | 5.3 | 15 | PDB header:membrane protein/transport protein Chain: B: PDB Molecule:upf0092 membrane protein yajc; PDBTitle: x-ray crystal structure of acrb in complex with a novel2 transmembrane helix.
75 | d2e9xa1 |
| not modelled | 5.3 | 7 | Fold:GINS helical bundle-like Superfamily:GINS helical bundle-like Family:PSF1 N-terminal domain-like
76 | c3gb8B_ |
| not modelled | 5.3 | 4 | PDB header:transport protein Chain: B: PDB Molecule:snurportin-1; PDBTitle: crystal structure of crm1/snurportin-1 complex
77 | c1nohB_ |
| not modelled | 5.3 | 14 | PDB header:viral protein Chain: B: PDB Molecule:head morphogenesis protein; PDBTitle: the structure of bacteriophage phi29 scaffolding protein2 gp7 after prohead assembly
78 | c3ei1A_ |
| not modelled | 5.3 | 17 | PDB header:dna binding protein/dna Chain: A: PDB Molecule:dna damage-binding protein 1; PDBTitle: structure of hsddb1-drddb2 bound to a 14 bp 6-42 photoproduct containing dna-duplex
79 | c1ij3B_ |
| not modelled | 5.3 | 8 | PDB header:transcription Chain: B: PDB Molecule:general control protein gcn4; PDBTitle: gcn4-pvsl coiled-coil trimer with serine at the a(16)2 position
80 | c1ij3C_ |
| not modelled | 5.3 | 8 | PDB header:transcription Chain: C: PDB Molecule:general control protein gcn4; PDBTitle: gcn4-pvsl coiled-coil trimer with serine at the a(16)2 position
81 | c3ilwA_ |
| not modelled | 5.3 | 11 | PDB header:isomerase Chain: A: PDB Molecule:dna gyrase subunit a; PDBTitle: structure of dna gyrase subunit a n-terminal domain
82 | d1i9za_ |
| not modelled | 5.3 | 22 | Fold:DNase I-like Superfamily:DNase I-like Family:Inositol polyphosphate 5-phosphatase (IPP5)
83 | d2fgea3 |
| not modelled | 5.3 | 15 | Fold:LuxS/MPP-like metallohydrolase Superfamily:LuxS/MPP-like metallohydrolase Family:MPP-like
84 | c3eb7B_ |
| not modelled | 5.2 | 18 | PDB header:toxin Chain: B: PDB Molecule:insecticidal delta-endotoxin cry8ea1; PDBTitle: crystal structure of insecticidal delta-endotoxin cry8ea1 from2 bacillus thuringiensis at 2.2 angstroms resolution
85 | d1gega_ |
| not modelled | 5.2 | 17 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Tyrosine-dependent oxidoreductases
86 | d1k1xa1 |
| not modelled | 5.2 | 11 | Fold:immunoglobulin/albumin-binding domain-like Superfamily:Families 57/38 glycoside transferase middle domain Family:4-alpha-glucanotransferase, domain 2
87 | c3jywM_ |
| not modelled | 5.2 | 5 | PDB header:ribosome Chain: M: PDB Molecule:60s ribosomal protein l16(a); PDBTitle: structure of the 60s proteins for eukaryotic ribosome based on cryo-em2 map of thermomyces lanuginosus ribosome at 8.9a resolution
88 | c1zi7C_ |
| not modelled | 5.1 | 10 | PDB header:lipid binding protein Chain: C: PDB Molecule:kes1 protein; PDBTitle: structure of truncated yeast oxysterol binding protein osh4
89 | c3ifzA_ |
| not modelled | 5.1 | 11 | PDB header:isomerase Chain: A: PDB Molecule:dna gyrase subunit a; PDBTitle: crystal structure of the first part of the mycobacterium tuberculosis2 dna gyrase reaction core: the breakage and reunion domain at 2.7 a3 resolution
90 | d1tsja_ |
| not modelled | 5.1 | 18 | Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:3-demethylubiquinone-9 3-methyltransferase
91 | c2yggA_ |
| not modelled | 5.0 | 25 | PDB header:metal binding protein/transport protein Chain: A: PDB Molecule:sodium/hydrogen exchanger 1; PDBTitle: complex of cambr and cam