130 d1juba_ Probab=98.35   E-value=5.1e-05  Score=48.53  Aligned_columns=189  Identities=19%

Q ss_pred             CCEEEEEECCCCHHHHHHHHHHHHHCC-CCEEEEEE------CCCCCCCCCCCCHHHHHHHHHHCCCCEEEEC----CCC
Q ss_conf             714843510199788999999999779-98999982------1478697524598999999984799737713----774
Q batch____         3 QYLIAPSILSADFARLGEDTAKALAAG-ADVVHFDV------MDNHYVPNLTIGPMVLKSLRNYGITAPIDVH----LMV   71 (225)
Q Consensus         3 k~~i~p~i~~~d~~~~~e~~~~~~~~G-~~~ihi~i------~dg~f~~~~~~g~~~i~~l~~~~~~~~~~~~----l~~   71 (225)
                      ...+.++|.+.+.....+.++.+.+.+ ++.+++..      .......+...-.+.++.+++. .+.|+..+    ...
T Consensus        93 ~~pi~~~i~~~~~~~~~~~~~~~~~~~~a~~i~in~~~~~~~~~~~~~~~~~~~~~~i~~i~~~-~~~pv~~k~~~~~~~  171 (311)
T d1juba_          93 EGPIFFSIAGMSAAENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTF-FTKPLGVKLPPYFDL  171 (311)
T ss_dssp             SSCCEEEECCSSHHHHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTT-CCSCEEEEECCCCSH
T ss_pred             CCEEEEECCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCHHHHCCHHHHHHHHHHHHHH-CCCCEEECCCCCCCC
T ss_conf             9469997168998999999987652358987733786655432003204989999999999972-289411010477764


Q ss_pred             CCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCCCEEEEEEEECCCCCCCCC
Q ss_conf             89899999998369989971777703499999999976995899935897189999975116878987753688864434
Q batch____        72 KPVDRIVPDFAAAGASIITFHPEASEHVDRTLQLIKENGCKAGLVFNPATPLSYLDYVMDKLDVILLMSVNPGFGGQSFI  151 (225)
Q Consensus        72 ~~~~~~i~~~~~~Gad~v~v~~~~~~~~~~~~~~~~~~g~~~~i~v~~~t~~e~~~~~~~~~~~i~~~~~~~g~~~~~~~  151 (225)
                      ......++.+.++|+|++++.                ......+.+...+.             -..........+....
T Consensus       172 ~~~~~~a~~~~~~G~d~i~v~----------------~~~~~~~~~~~~~~-------------~~~~~~~~~~g~~~g~  222 (311)
T d1juba_         172 VHFDIMAEILNQFPLTYVNSV----------------NSIGNGLFIDPEAE-------------SVVIKPKDGFGGIGGA  222 (311)
T ss_dssp             HHHHHHHHHHTTSCCCEEEEC----------------CCEEEEECEETTTT-------------EESCSGGGGEEEEESG
T ss_pred             CCHHHHHHHHHHCCCCEEEEE----------------CCCCCCCEECCCCH-------------HCCCCCCCCCCCCCCC
T ss_conf             002999988873798699970----------------88653210223210-------------0001334445664641


Q ss_pred             CCCHHHHHHHHHHHCCCCCCCEEEEECCC-CHHHHHHHHHCCCCEEEEEEH-HHCCCC-HHHHHHHHHHHHHH
Q ss_conf             35578999999840014785138850788-987799999759989999305-646999-89999999999999
Q batch____       152 PQTLDKLREVRRRIDESGFDIRLEVDGGV-KVNNIGEIAAAGADMFVAGSA-IFDQPD-YKKVIDEMRSELAK  221 (225)
Q Consensus       152 ~~~~~~i~~l~~~~~~~~~~~~i~~~Ggi-~~~~~~~~~~~Gad~vvvGsa-I~~a~d-p~~~~~~l~~~l~~  221 (225)
                      +..+..++.+........+++++.++||+ +.+++.+++.+|||.|-+||+ +++..+ +....++|+..+.+
T Consensus       223 ~~~~~a~~~~~~~~~~~~~~ipii~~GGI~~~~dv~k~l~lGAdaV~igta~~~~g~~~~~~i~~eL~~~m~~  295 (311)
T d1juba_         223 YIKPTALANVRAFYTRLKPEIQIIGTGGIETGQDAFEHLLCGATMLQIGTALHKEGPAIFDRIIKELEEIMNQ  295 (311)
T ss_dssp             GGHHHHHHHHHHHHTTSCTTSEEEEESSCCSHHHHHHHHHHTCSEEEECHHHHHHCTHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEECHHHHHCCHHHHHHHHHHHHHHHHH
T ss_conf             1046899999998885078966999478799999999997299899992788852589999999999999998