Phyre 2 alignment of P0A8K1 with d1miua3

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Job Description | P0A8K1
Confidence | 12.53% | Date | Thu Jan 5 11:08:01 GMT 2012
Rank | 70 | Aligned Residues | 29
% Identity | 24% | Template | d1miua3
SCOP info | OB-fold | Nucleic acid-binding proteins | Single strand DNA-binding domain, SSB
Resolution | 3.10

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 276 | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | V | T | K | I | G | Q | P | L | A | V | S | T | E | T | F | V | T | P | D | A | E | P | A | P | L | P | A | E | E
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | K | L | T | V | G | Q | K | I | I | T | Q | G | A | E | L | V | G | S | P | D | A | C | A | P | L | E | A | P | D
Template Known Secondary structure |  |  | S |  | S | S |  | B |  |  |  | S | S | B |  |  |  | S |  |  | S |  |  |  | T | T | S |  |  | S
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 2665 | . | . | . | . | 2670 | . | . | . | . | . | . | . | . | . | 2680 | . | . | . | . | . | . | . | . | . | 2690 | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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