Phyre 2 alignment of P0A8K1 with c2b44A_

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Job Description | P0A8K1
Confidence | 23.83% | Date | Thu Jan 5 11:08:01 GMT 2012
Rank | 50 | Aligned Residues | 25
% Identity | 20% | Template | c2b44A_
PDB info | PDB header:hydrolase | Chain: A: PDB Molecule:glycyl-glycine endopeptidase lytm; | PDBTitle: truncated s. aureus lytm, p 32 2 1 crystal form
Resolution | 1.83 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | Q | L | E | S | L | S | V | T | K | I | G | Q | P | L | A | V | S | T | E | T | F | V | T | P | D
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | T | V | S | A | G | D | K | V | K | A | G | D | Q | I | A | Y | S | G | S | T | G | N | S | T | A
Template Known Secondary structure |  |  |  |  | T | T |  |  |  |  | T | T |  |  |  |  |  |  | B |  |  | S | S |  |  | S
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 265 | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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