Phyre 2 alignment of P0A8K1 with c2hsiB_

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Job Description | P0A8K1
Confidence | 38.52% | Date | Thu Jan 5 11:08:01 GMT 2012
Rank | 32 | Aligned Residues | 49
% Identity | 18% | Template | c2hsiB_
PDB info | PDB header:structural genomics, unknown function | Chain: B: PDB Molecule:putative peptidase m23; | PDBTitle: crystal structure of putative peptidase m23 from2 pseudomonas aeruginosa, new york structural genomics3 consortium
Resolution | 1.90 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 246 | . | . | . | 250 | . | . |  | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . |  |  |  |  |  | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | E | M | G | R | F | K | L | . | G | S | T | V | I | N | L | F | A | P | G | K | V | N | L | . | . | . | . | . | V | E | Q | L | E | S | L | S | V | T | K | I | G | Q | P | L | A | V | S | T | E | T | F | V | T | P | D
Query Conservation |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | L | I | G | D | Y | F | F | N | G | K | T | V | F | V | D | H | G | Q | G | F | I | S | M | F | C | H | L | S | K | I | D | V | K | L | G | Q | Q | V | P | R | G | G | V | L | G | K | V | G | A | T | G | R | A | T | G
Template Known Secondary structure |  |  |  |  |  |  | T | T | T |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  | S |  |  |  | S |  | T | T |  |  |  |  | T | T |  |  |  |  |  |  |  |  | T | T | T |  | S | S
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 203 | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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