Phyre 2 alignment of P0A8K1 with d1y7ma2

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Job Description | P0A8K1
Confidence | 7.71% | Date | Thu Jan 5 11:08:01 GMT 2012
Rank | 96 | Aligned Residues | 39
% Identity | 13% | Template | d1y7ma2
SCOP info | LysM domain | LysM domain | LysM domain
Resolution | 2.05

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | A | L | L | K | G | Q | E | M | G | R | F | K | L | . | . | G | S | T | V | I | N | L | F | A | P | G | K | V | N | L | V | E | Q | L | E | S | L | S | V | T | K | I
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | Q | V | K | Q | G | D | T | L | N | S | I | A | A | D | F | R | I | S | T | A | A | L | L | Q | A | N | P | S | . | L | Q | A | G | L | T | A | G | Q | S | I | V | I
Template Known Secondary structure |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  | T | T | S |  |  |  |  |  |  |  | T | S |  | T | . | T |  | S | S |  |  | T | T |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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