10/01/2012 02:40:24 : INFO  : Run start: Tue Jan 10 02:40:23 GMT 2012
10/01/2012 02:40:28 : INFO  : Initialised job
10/01/2012 02:40:30 : INFO  : Renaming log file 'phyre2_20120110_024022.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/6b66f5763c3f76a5/phyre_20120110_024022.log'
10/01/2012 02:40:31 : INFO  : Initialised job:
Sequence
>batch____
MTNNESKGPFEGLLVIDMTHVLNGPFGTQLLCNMGARVIKVEPPGHGDDTRTFGPYVDGQ
SLYYSFINHGKESVVLDLKNDHDKSIFINMLKQADVLAENFRPGTMEKLGFSWETLQEIN
PRLIYASSSGFGHTGPLKDAPAYDTIIQAMSGIMMETGYPDAPPVRVGTSLADLCGGVYL
FSGIVSALYGREKSQRGAHVDIAMFDATLSFLEHGLMAYIATGKSPQRLGNRHPYMAPFD
VFNTQDKPITICCGNDKLFSALCQALELTELVNDPRFSSNILRVQNQAILKQYIERTLKT
QAAEVWLARIHEVGVPVAPLLSVAEAIKLPQTQARNMLIEAGGIMMPGNPIKISGCADPH
VMPGAATLDQHGEQIRQEFSS

10/01/2012 02:40:32 : INFO  : Checked sequence
10/01/2012 02:40:35 : INFO  : Finding homologues with PSI-BLAST
10/01/2012 02:40:36 : INFO  : PSI-BLAST 3 iterations
10/01/2012 02:43:32 : INFO  : PSI-BLAST 5 iterations
10/01/2012 02:45:39 : INFO  : Finished PSI-BLAST
10/01/2012 02:45:41 : INFO  : Running Buildali to generate a3m file
10/01/2012 02:58:28 : INFO  : Converting to HMM
10/01/2012 02:58:32 : INFO  : Calibrating HMM
10/01/2012 02:58:50 : INFO  : Searching HMM database
10/01/2012 03:07:22 : INFO  : Finished buildali
10/01/2012 03:07:23 : INFO  : Predicting secondary structure
10/01/2012 03:07:29 : INFO  : Predicted secondary structure (PSI-Pred)
10/01/2012 03:07:30 : INFO  : Predicting Disordered regions
10/01/2012 03:07:33 : INFO  : Predicted Disorder (Disopred)
10/01/2012 03:07:34 : INFO  : Running memsat_svm check
10/01/2012 03:10:23 : INFO  : Running memsat_svm full
10/01/2012 03:16:38 : INFO  : Predicted Transmembrane (memsat_svm) ID '6b66f5763c3f76a5'
10/01/2012 03:16:45 : INFO  : Initialising fold library search
10/01/2012 03:16:47 : INFO  : Initialised search input
10/01/2012 03:16:49 : INFO  : Building Ensemble models
10/01/2012 03:16:52 : INFO  : Building hh.d2vjma1.model.1.pdb
10/01/2012 03:17:04 : INFO  : Building hh.d1xk7a1.model.2.pdb
10/01/2012 03:17:12 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/6b66f5763c3f76a5/hh.d1xk7a1.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/6b66f5763c3f76a5/d1xk7a1.2.pdb
10/01/2012 03:17:15 : INFO  : Building hh.d1q7ea_.model.3.pdb
10/01/2012 03:17:24 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/6b66f5763c3f76a5/hh.d1q7ea_.model.3.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/6b66f5763c3f76a5/d1q7ea_.3.pdb
10/01/2012 03:17:28 : INFO  : Building hh.c1xa3B_.model.4.pdb
10/01/2012 03:17:38 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/6b66f5763c3f76a5/hh.c1xa3B_.model.4.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/6b66f5763c3f76a5/c1xa3B_.4.pdb
10/01/2012 03:17:42 : INFO  : Building hh.d1x74a1.model.5.pdb
10/01/2012 03:17:51 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/6b66f5763c3f76a5/hh.d1x74a1.model.5.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/6b66f5763c3f76a5/d1x74a1.5.pdb
10/01/2012 03:17:56 : INFO  : Building hh.c2g04B_.model.6.pdb
10/01/2012 03:18:05 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/6b66f5763c3f76a5/hh.c2g04B_.model.6.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/6b66f5763c3f76a5/c2g04B_.6.pdb
10/01/2012 03:18:08 : INFO  : Building d2vjma1.1.pdb
10/01/2012 03:18:18 : INFO  : Building d1xk7a1.2.pdb
10/01/2012 03:18:29 : INFO  : Building d1q7ea_.3.pdb
10/01/2012 03:18:40 : INFO  : Building c1xa3B_.4.pdb
10/01/2012 03:18:51 : INFO  : Building d1x74a1.5.pdb
10/01/2012 03:19:01 : INFO  : Building c2g04B_.6.pdb
10/01/2012 03:19:12 : INFO  : Building c3p2yA_.7.pdb
10/01/2012 03:19:24 : INFO  : Building c2bruB_.8.pdb
10/01/2012 03:19:37 : INFO  : Building d1l7da1.9.pdb
10/01/2012 03:19:47 : INFO  : Building c3dhyC_.10.pdb
10/01/2012 03:19:58 : INFO  : Building c1wwkA_.11.pdb
10/01/2012 03:20:11 : INFO  : Building c3kboB_.12.pdb
10/01/2012 03:20:23 : INFO  : Building c1pjcA_.13.pdb
10/01/2012 03:20:33 : INFO  : Building c1v8bA_.14.pdb
10/01/2012 03:20:44 : INFO  : Building c2omeA_.15.pdb
10/01/2012 03:20:55 : INFO  : Building c3oneA_.16.pdb
10/01/2012 03:21:06 : INFO  : Building d1gdha1.17.pdb
10/01/2012 03:21:18 : INFO  : Building d2dlda1.18.pdb
10/01/2012 03:21:28 : INFO  : Building c2rirA_.19.pdb
10/01/2012 03:21:38 : INFO  : Building c2g76A_.20.pdb
10/01/2012 03:23:08 : INFO  : Finished HH model building
10/01/2012 03:23:09 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
10/01/2012 03:24:04 : INFO  : html domain output complete ID '6b66f5763c3f76a5'
10/01/2012 04:30:09 : INFO  : Run end  : Tue Jan 10 04:30:08 GMT 2012
