Phyre 2 alignment of P66948 with d2ajfa1

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Job Description | P66948
Confidence | 74.03% | Date | Thu Jan 5 12:10:22 GMT 2012
Rank | 188 | Aligned Residues | 45
% Identity | 13% | Template | d2ajfa1
SCOP info | Zincin-like | Metalloproteases ("zincins"), catalytic domain | Neurolysin-like
Resolution | 2.90

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | N | N | D | E | I | N | A | F | A | F | F | . | . | . | . | . | . | G | G | N | V | V | L | H | S | A | L | F | R | Y | S | D | N | E | S | Q | L | A | S | V | M | A | H | E | I | S | H | V | T | Q | R | H | L | A | R
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | P | G | N | V | Q | K | A | V | C | H | P | T | A | W | D | L | G | K | G | D | F | R | I | . | . | . | L | M | C | T | K | V | T | M | D | D | F | . | L | T | A | H | H | E | M | G | H | I | Q | Y | D | M | A | Y | A
Template Known Secondary structure |  |  |  | S | S | S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  | . | . | . |  |  |  |  |  | S | S |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 336 | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . |  |  |  | . | 360 | . | . | . | . | . | . | . | . | . |  | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | .

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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