 |
| Job Description | Q00037 | | Confidence | 21.92% | Date | Thu Jan 5 12:33:19 GMT 2012 |
| Rank | 22 | Aligned Residues | 51 |
| % Identity | 24% | Template | c2eqoA_ |
| PDB info |
PDB header:transcription | Chain: A: PDB Molecule:tnf receptor-associated factor 3-interacting |
PDBTitle: solution structure of the stn_traf3ip1_nd domain of2 interleukin 13 receptor alpha 1-binding protein-1 [homo3 sapiens]
|
| Resolution | UNK |
|
|   |   |
585 | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
600 | . | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | . | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
L | T | E | L | L | L | E | I | D | A | Q | T | G | F | T | . |
. |
. |
. |
. |
. |
. |
. |
H | E | F | A | H | V | S | E | S | G | A | R | A | Q | D | L | H | I | S | L | C | A | V | L | M | A | E | A | C | N | I | G | L | E | P | L |
| Query Conservation |   |
|   |
|
|
|   |
|
|   |   |   |
|
|
|   | . | . | . | . | . | . | . | . |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |
|   |
|
|
|
|
|   |   |   |
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|
|
|
|
|   |   |
|   |   |   |
|
|
|   |   |
|
|
|   |   |   |
|
|   |   |   |   |
|   |
|
|
|   |
|   |
|
|
|   |
|
|
|   |   |
|   |   |   |   |
|   |   |
|   |
|   |
|   |
| Template Sequence |   |
L | H | D | I | I | T | E | V | I | R | M | T | G | F | M | K | G | L | Y | T | D | A | E | M | K | S | D | N | V | K | D | K | D | A | K | I | S | F | L | Q | K | A | I | D | V | V | V | M | V | S | G | E | P | L | L | A | K | P | A |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | T |
| S | S | T | T | T | S |
|  |  |  |  |
| G | G | G |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
42 | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|