10/01/2012 09:10:19 : INFO  : Run start: Tue Jan 10 09:10:19 GMT 2012
10/01/2012 09:10:22 : INFO  : Initialised job
10/01/2012 09:10:23 : INFO  : Renaming log file 'phyre2_20120110_091018.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/6b0ea107f5073597/phyre_20120110_091018.log'
10/01/2012 09:10:24 : INFO  : Initialised job:
Sequence
>batch____
MMQPSIKPADEHSAGDIIARIGSLTRMLRDSLRELGLDQAIAEAAEAIPDARDRLYYVVQ
MTAQAAERALNSVEASQPHQDQMEKSAKALTQRWDDWFADPIDLADARELVTDTRQFLAD
VPAHTSFTNAQLLEIMMAQDFQDLTGQVIKRMMDVIQEIERQLLMVLLENIPEQESRPKR
ENQSLLNGPQVDTSKAGVVASQDQVDDLLDSLGF

10/01/2012 09:10:24 : INFO  : Checked sequence
10/01/2012 09:10:26 : INFO  : Finding homologues with PSI-BLAST
10/01/2012 09:10:27 : INFO  : PSI-BLAST 3 iterations
10/01/2012 09:11:39 : INFO  : PSI-BLAST 5 iterations
10/01/2012 09:12:56 : INFO  : Finished PSI-BLAST
10/01/2012 09:12:57 : INFO  : Running Buildali to generate a3m file
10/01/2012 09:16:41 : INFO  : Converting to HMM
10/01/2012 09:16:42 : INFO  : Calibrating HMM
10/01/2012 09:16:51 : INFO  : Searching HMM database
10/01/2012 09:21:33 : INFO  : Finished buildali
10/01/2012 09:21:34 : INFO  : Predicting secondary structure
10/01/2012 09:21:36 : INFO  : Predicted secondary structure (PSI-Pred)
10/01/2012 09:21:36 : INFO  : Predicting Disordered regions
10/01/2012 09:21:37 : INFO  : Predicted Disorder (Disopred)
10/01/2012 09:21:38 : INFO  : Running memsat_svm check
10/01/2012 09:23:16 : INFO  : Globular protein
10/01/2012 09:23:16 : INFO  : Predicted Transmembrane (memsat_svm) ID '6b0ea107f5073597'
10/01/2012 09:23:16 : INFO  : Initialising fold library search
10/01/2012 09:23:17 : INFO  : Initialised search input
10/01/2012 09:23:18 : INFO  : Building Ensemble models
10/01/2012 09:23:19 : INFO  : Building hh.c1kmiZ_.model.1.pdb
10/01/2012 09:23:23 : INFO  : Building c1kmiZ_.1.pdb
10/01/2012 09:23:27 : INFO  : Building c2pl9D_.2.pdb
10/01/2012 09:23:31 : INFO  : Building c2pl9E_.3.pdb
10/01/2012 09:23:35 : INFO  : Building c2pl9F_.4.pdb
10/01/2012 09:23:39 : INFO  : Building c2damA_.5.pdb
10/01/2012 09:23:43 : INFO  : Building c1zvzA_.6.pdb
10/01/2012 09:23:47 : INFO  : Building d1szia_.7.pdb
10/01/2012 09:23:51 : INFO  : Building d2a2pa1.8.pdb
10/01/2012 09:23:54 : INFO  : Building d1rqba1.9.pdb
10/01/2012 09:23:58 : INFO  : Building c2wpqA_.10.pdb
10/01/2012 09:24:03 : INFO  : Building c2vs0B_.11.pdb
10/01/2012 09:24:07 : INFO  : Building c3gvmA_.12.pdb
10/01/2012 09:24:11 : INFO  : Building c1rr2A_.13.pdb
10/01/2012 09:24:15 : INFO  : Building d1wa8a1.14.pdb
10/01/2012 09:24:19 : INFO  : Building c3hkzZ_.15.pdb
10/01/2012 09:24:23 : INFO  : Building c3ayhA_.16.pdb
10/01/2012 09:24:27 : INFO  : Building c3hkzY_.17.pdb
10/01/2012 09:24:32 : INFO  : Building c2waqQ_.18.pdb
10/01/2012 09:24:36 : INFO  : Building d2e1fa1.19.pdb
10/01/2012 09:24:40 : INFO  : Building c2y0sJ_.20.pdb
10/01/2012 09:24:50 : INFO  : Finished HH model building
10/01/2012 09:24:50 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
10/01/2012 09:25:25 : INFO  : html domain output complete ID '6b0ea107f5073597'
10/01/2012 09:28:25 : INFO  : Run end  : Tue Jan 10 09:28:25 GMT 2012
