5 c3amkA_ Probab=98.42   E-value=0.00023  Score=48.70  Aligned_columns=343  Identities=15%

Q ss_pred             CCCCCCCCCHHHHH-HHHHHHHHCCCCEEEECCCCCCCCCCCCCCC-CCCCCCCCCCCEEEECHHHCCCCCCCCHHHHHH
Q ss_conf             68786427059999-9999999739979998566757889999898-898330132652031767746532287666553
Q batch____       155 SEKNWGIGDFGDLK-AMLVDVAKRGGSFIGLNPIHALYPANPESAS-PYSPSSRRWLNVIYIDVNAVEDFHLSEEAQAWW  232 (694)
Q Consensus       155 s~~~~GIGDf~dL~-~l~~~~a~~G~~~i~i~Plha~~p~~p~~~S-PYsp~Sr~~lNplyI~~e~l~e~~~~~~~~~~~  232 (694)
                      ...+-..|.|.+++ ++++.+++.|...|+|+|+..    .|...| -|.|++=++.+|-|=.++               
T Consensus       186 ~~~~~~~~~~~~~~~~~l~ylk~LGvt~I~LmPi~e----~~~~~~wGY~~~~y~av~~~yGt~~---------------  246 (675)
T c3amkA_         186 SGEEPEVSTYREFADNVLPRIRANNYNTVQLMAIME----HSYYASFGYHVTNFFAVSSRSGTPE---------------  246 (675)
T ss_dssp             CSSSSSCCCHHHHHHHTHHHHHHTTCCEEEECSCEE----CSCGGGTTCSCSEEEEECGGGCCHH---------------
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCC----CCCCCCCCCCCCCCCCCCCCCCCHH---------------
T ss_conf             478987475899999898999975997999848626----8898985765552356076678999---------------


Q ss_pred             HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf             00334545530166666388999999999999999976005766689999999842445488899999999836777567
Q batch____       233 QLPTTQQTLQQARDADWVDYSTVTALKMTALRMAWKGFAQRDDEQMAAFRQFVAEQGDSLFWQAAFDALHAQQVKEDEMR  312 (694)
Q Consensus       233 ~~~~~~~~~~~l~~~~~VDy~~v~~~K~~~L~~~f~~f~~~~~~~~~~F~~F~~~~g~~L~~yA~F~AL~~~~~~~~~~~  312 (694)
                                                                                                      
T Consensus       247 --------------------------------------------------------------------------------  246 (675)
T c3amkA_         247 --------------------------------------------------------------------------------  246 (675)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
T ss_conf             --------------------------------------------------------------------------------


Q ss_pred             CCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEE-ECCCHHHHCCCHH
Q ss_conf             774449966726791789999999799999999999999999999999999879849998754125-3287365603967
Q batch____       313 WGWPAWPEMYQNVDSPEVRQFCEEHRDDVDFYLWLQWLAYSQFAACWEISQGYEMPIGLYRDLAVG-VAEGGAETWCDRE  391 (694)
Q Consensus       313 ~~W~~WP~~~r~~~~~~v~~~~~e~~~~v~f~~~lQw~a~~Ql~~~~~~A~~~Gm~IgL~gDLaVg-v~~~gaDvWa~~~  391 (694)
                                                               +++++-+.|+++|  |.+|-|+-+. ++.++...+.   
T Consensus       247 -----------------------------------------dfk~LVd~~H~~G--I~VIlDvV~NH~~~~~~~~~~---  280 (675)
T c3amkA_         247 -----------------------------------------DLKYLVDKAHSLG--LRVLMDVVHSHASNNVTDGLN---  280 (675)
T ss_dssp             -----------------------------------------HHHHHHHHHHHTT--CEEEEEECCSCEECCTTTSGG---
T ss_pred             -----------------------------------------HHHHHHHHHHHCC--CEEEEEECCCCCCCCCCHHHH---
T ss_conf             -----------------------------------------9999999999889--889999712535785300445---


Q ss_pred             HHCCCCEEECCCCCCCCCCC----CCCCCCCCHHHHHHHCCHHHHHHHHHHHH--HCCEEEECCHHHHH-----HHHCCC
Q ss_conf             81389767117753691277----78888788789988084899999999999--88989997557755-----641245
Q batch____       392 LYCLKASVGAPPDILGPLGQ----NWGLPPMDPHIITARAYEPFIELLRANMQ--NCGALRIDHVMSML-----RLWWIP  460 (694)
Q Consensus       392 ~f~~~~svGAPPD~Fs~~GQ----~WG~P~~~p~~L~~~gy~~~~~rlr~~~~--~~g~lRIDHvlGl~-----RlW~iP  460 (694)
                        ..+...+....+|...+.    .||.+-+|...=.-..|  .++.++.-++  +.|++|+|-+-.+.     .....-
T Consensus       281 --~~d~~~~~~~~~~~~~~~~~~~~w~~~~~n~~~p~Vr~~--i~d~~~~Wi~eygIDGfR~Dav~~m~~~~~~~~~~~~  356 (675)
T c3amkA_         281 --GYDVGQNTHESYFHTGDRGYHKLWDSRLFNYANWEVLRF--LLSNLRYWMDEFMFDGFRFDGVTSMLYHHHGINKGFT  356 (675)
T ss_dssp             --GGCSSCCGGGSSBCCGGGGEETTTTEECBCTTSHHHHHH--HHHHHHHHHHHHCCSEEEETTHHHHHBTTTTTTCCCC
T ss_pred             --HHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHH--HHHHHHHHHHHCCCCEEEECCHHHCCCCCCCCCCCCC
T ss_conf             --311688874233416887616789852117989999999--9999999998629989998645530323345655444


Q ss_pred             CCCCCCCCEEEECCHHHHHHHH--HHHHHHCCCCEEEECCCCCC----------------------HHHHHHHHHCCCCC
Q ss_conf             8987668706008979999999--88876349819995088999----------------------87999999849997
Q batch____       461 YGETADQGAYVHYPVDDLLSIL--ALESKRHRCMVIGEDLGTVP----------------------VEIVGKLRSSGVYS  516 (694)
Q Consensus       461 ~g~~a~~G~yv~yP~e~ll~il--alEs~r~~~~vIgEDLGtVp----------------------~~Vr~~l~~~gi~g  516 (694)
                      ..-....|........+++..+  .+.+...++++|||+.+.-|                      ..++..+.....-.
T Consensus       357 ~~~~~~~~~~~~~~~~~fl~~~~~~i~~~~p~~~~iaE~~~~~~~~~~~~~~gg~gfd~~~~~~~~~~~~~~~~~~~~~~  436 (675)
T c3amkA_         357 GNYKEYFSLDTDVDAIVYMMLANHLMHKLLPEATIVAEDVSGMPVLCRPVDEGGVGFDFRLAMAIPDRWIDYLKNKEDRK  436 (675)
T ss_dssp             SCHHHHSSTTBCHHHHHHHHHHHHHHHHHCTTCEEEECCSSCCTTTTSCGGGTSCCCSEEECTTHHHHHHHHHHHCCGGG
T ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHCCCCCCCCCCCEEECCHHHHHHHHHHCCCCCCH
T ss_conf             44433346656633589999999999886698699974407863450001147987010117368899999863485301


Q ss_pred             CEEEEEECCCCCCCCCHHHCCCCCEEECCCCCCHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             44776401788987793578835599636678747998740253457776001355100134454349999999999775
Q batch____       517 YKVLYFENDHEKTFRAPKAYPEQSMAVAATHDLPTLRGYWECGDLTLGKTLGLYPDEVVLRGLYQDRELAKQGLLDALHK  596 (694)
Q Consensus       517 ~~Vl~Fe~~~d~~f~~P~~y~~~ava~~sTHD~pTl~Gww~g~di~~r~~lgl~~~~~~~~~~~~~r~~~r~~l~~~L~~  596 (694)
                      ..+...-.......     ++.++|.++.+||..++..+.....+-.......-.........                 
T Consensus       437 ~~~~~~~~~~~~~~-----~~~~~v~f~enHD~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------  494 (675)
T c3amkA_         437 WSMSEIVQTLTNRR-----YTEKCIAYAESHDDKTIAFLLMDKEMYTGMSDLQPASPTINRGI-----------------  494 (675)
T ss_dssp             CCHHHHHHHHHCSC-----TTSCEEBCSCCCCCCCHHHHHHGGGHHHHTBTTSCCCHHHHHHH-----------------
T ss_pred             HHHHHHHHHHHCCC-----CCCCEEEECCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHH-----------------
T ss_conf             36888886662376-----82016996100686620001263233100002445786779999-----------------


Q ss_pred             CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHHHCCCCCCCCCCCCCCCCCCEEECCCCHHHHHCC---
Q ss_conf             27775445654333345178999999999848251640004254159688888999988998600078898888249---
Q batch____       597 YGCLPKRAGHKASLMSMTPTLNRGLQRYIADSNSALLGLQPEDWLDMAEPVNIPGTSYQYKNWRRKLSATLESMFAD---  673 (694)
Q Consensus       597 ~G~~~~~~~~~~~~~~~~~~l~~al~~~la~s~s~L~~v~l~Dllg~~~~~N~PGT~~~ypNWr~Rl~~~le~l~~~---  673 (694)
                                         .....+..+++.++-.-.++.+-+=+|.....+.|...++  |.--+-+....-.-++   
T Consensus       495 -------------------~~~kl~~~~~l~~~G~p~liy~G~E~G~~~~~d~~~~~~~--~~~~~~~~~w~~~~~~~~~  553 (675)
T c3amkA_         495 -------------------ALQKMIHFITMALGGDGYLNFMGNEFGHPEWIDFPREGNN--WSYDKCRRQWSLVDTDHLR  553 (675)
T ss_dssp             -------------------HHHHHHHHHHHHHHCSSEEEETTGGGTCCSCCCCCCGGGT--SCCTTSSCCHHHHHCTTBS
T ss_pred             -------------------HHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCC
T ss_conf             -------------------9999999999994898317840101146578886545768--8855466587753333332


Q ss_pred             -HHHHHHHHHHHHHHHH
Q ss_conf             -8999999999983266
Q batch____       674 -DGVNKLLKDLDRRRRA  689 (694)
Q Consensus       674 -~~~~~l~~~l~~~rr~  689 (694)
                       ..+....+.|.+-|++
T Consensus       554 ~~~L~~f~k~Li~LRk~  570 (675)
T c3amkA_         554 YKYMNAFDQAMNALEEE  570 (675)
T ss_dssp             HHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHH
T ss_conf             37999999999999874


