109 d1jnra2 Probab=99.83   E-value=1.4e-18  Score=137.91  Aligned_columns=223  Identities=22%

Q ss_pred             CCEEEECCCHHHHHHHHHHHH----CCCCEEEEECC--CCCEEEEECCCCCCCCCCCCC---------------------
Q ss_conf             358998895889999999998----89939999688--887277620256556656789---------------------
Q batch____       213 YDVLIVGSGPAGAAAAIYSAR----KGIRTGLMGER--FGGQILDTVDIENYISVPKTE---------------------  265 (521)
Q Consensus       213 yDViIIGgGpAGlsAA~~lar----~G~kV~ViEk~--~GG~~~~~~~i~~~~~~~~~~---------------------  265 (521)
                      |||+|||||||||+||++|+|    +|++|+|+||.  +||.+....+++.........                     
T Consensus        22 ~DVvIIGaGpAGlsAA~~lAr~~~~~G~~V~vlEk~~~~gg~~~~~g~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~  101 (356)
T d1jnra2          22 TDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAVERSGAVAQGLSAINTYIDLTGRSERQNTLEDYVRYVTLDMMG  101 (356)
T ss_dssp             CSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCTTTCSTTTTCEEEESCCCCSSSSBSCCCCHHHHHHHHHHHTTT
T ss_pred             EEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHCCC
T ss_conf             53899989688999999999845637983999977887881010023223263332000146456989999999973046


Q ss_pred             ---------HHHHHHHHHHHHHHCCCEEEECCEEEEEEECCCCCCCEEEEECCCCEEEEEEEEECCCCCCCCCCCCCHHH
Q ss_conf             ---------89999999999998698598084899997225556614999889948983454752488145588888000
Q batch____       266 ---------GQKLAGALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAKWRNMNVPGEDQ  336 (521)
Q Consensus       266 ---------~~el~~~l~~~~~~~~v~i~~~~~v~~i~~~~~~~~~~~v~~~~g~~l~a~~viiAtG~~~~~~~i~g~~~  336 (521)
                               ..+-.......+...++.+.                                                   
T Consensus       102 ~~~~~~~~~~~~~~~~~~~~l~~~g~~~~---------------------------------------------------  130 (356)
T d1jnra2         102 LAREDLVADYARHVDGTVHLFEKWGLPIW---------------------------------------------------  130 (356)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTCCBC---------------------------------------------------
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCCEEE---------------------------------------------------
T ss_conf             66899999999603688999996798699---------------------------------------------------


Q ss_pred             CCCCCEECCHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHCCCEEEECCEEEE
Q ss_conf             00133211154300004896399987970135788776423780599974887896478999889876988983874899
Q batch____       337 YRTKGVTYCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKADQVLQDKLRSLKNVDIILNAQTTE  416 (521)
Q Consensus       337 ~~~~~~~~~~~~~~~~~~gk~v~ViGgG~~~~~~A~~l~~~g~~v~ii~~~~~l~~~~~~~~~~~~~~gv~i~~~~~v~e  416 (521)
                              ..........++.+++.+|.......+..+...+..+.+..+                      .....+..
T Consensus       131 --------~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~l~~  180 (356)
T d1jnra2         131 --------KTPDGKYVREGQWQIMIHGESYKPIIAEAAKMAVGEENIYER----------------------VFIFELLK  180 (356)
T ss_dssp             --------BCTTSCBCBSSSSCEEEEETTHHHHHHHHHHHHHCGGGEECS----------------------EEEEEEEE
T ss_pred             --------EECCCCCCCCCCEEEECCHHHHHHHHHHHHHHCCCCEEEECC----------------------CEEEEEEE
T ss_conf             --------807764412541699736035799999999845578189518----------------------42899999


Q ss_pred             EEECCCEEEEEEEEECCCCCEEEEECCEEEEECCEEECH-------------------------HHHHCCCEECCCCC--
Q ss_conf             993498399999996316974699948999915512065-------------------------78842854978985--
Q batch____       417 VKGDGSKVVGLEYRDRVSGDIHNIELAGIFVQIGLLPNT-------------------------NWLEGAVERNRMGE--  469 (521)
Q Consensus       417 i~~~~~~v~~v~~~~~~~g~~~~i~~D~Vi~a~G~~pn~-------------------------~ll~~gl~~~~~G~--  469 (521)
                      ......+..++...+...+....+.++.++++.|-....                         ..++.+..+...|+  
T Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~vila~gg~~~i~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~g~~l~~~~~~~  260 (356)
T d1jnra2         181 DNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGATLLFRPRSTGEAAGRTWYAIFDTGSGYYMGLKAGAMLTQAGFWV  260 (356)
T ss_dssp             CTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCCBCSSSCCSCCSGGGGCCSSCTTCBSHHHHHHHHHTCCEECCEECC
T ss_pred             ECCCCCCEEEEEEEECCCCEEEEEEECCEEECCCCCCEEEECCCCCCCCCCEEEECCCCCCCEEEEEEECCEEECCCEEE
T ss_conf             57856531248999648972999940838974777400132123334444136400004882289997082764031021


Q ss_pred             --------------EEECCCCCCCCCCEEEEECCCCC-CHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             --------------83866772687874997033687-578999999989999999999884
Q batch____       470 --------------IIIDAKCETNVKGVFAAGDCTTV-PYKQIIIATGEGAKASLSAFDYLI  516 (521)
Q Consensus       470 --------------I~vD~~~~Ts~pgIyAaGD~~~~-~~~~i~~A~~~G~~AA~~a~~~L~  516 (521)
                                    |.+|.+++|++|||||+|||++. +..++..|+.+|+.||.+|.+|+.
T Consensus       261 ~~~~~~~~~~~~~~i~v~~~~~ts~~gv~a~GDaa~~~~~~~~~~A~~~G~~Aa~~a~~~i~  322 (356)
T d1jnra2         261 CGPEDLMPEEYAKLFPLKYNRMTTVKGLFAIGDCAGANPHKFSSGSFTEGRIAAKAAVRFIL  322 (356)
T ss_dssp             CCCTTTCCHHHHTTCSSCCTTBCSSBTEEECGGGBCSCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCEEECCCCEECCCCEEEEEHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf             34434531355873358665351699879940220665641024578988999999999984