181 c3nlcA_ Probab=99.31   E-value=1.3e-11  Score=93.13  Aligned_columns=118  Identities=18%

Q ss_pred             HCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECC--CCCEEEEEC----------------------------
Q ss_conf             00256647835899889588999999999889939999688--887277620----------------------------
Q batch____       204 AEELNKRDAYDVLIVGSGPAGAAAAIYSARKGIRTGLMGER--FGGQILDTV----------------------------  253 (521)
Q Consensus       204 ~~~~~~~~~yDViIIGgGpAGlsAA~~lar~G~kV~ViEk~--~GG~~~~~~----------------------------  253 (521)
                      ....++....+|+|||||+|||+||++|++.|++|+|+|++  +||++....                            
T Consensus        85 ~~~~~~~~~~~~vVVGaG~AGL~AA~~La~~G~~V~vlE~~~~~GGr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (534)
T c3nlcA_          85 VAKAPENLTERPIVIGFGPCGLFAGLVLAQXGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGK  164 (534)
T ss_dssp             CCCCCTTCCCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCC
T ss_pred             CCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHCHHCCCCC
T ss_conf             56676566886799889689999999999769819999788875643000245556420143344431011000002575


Q ss_pred             ----------------------------CCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEECCCCCCCEEE
Q ss_conf             ----------------------------2565566567898999999999999869859808489999722555661499
Q batch____       254 ----------------------------DIENYISVPKTEGQKLAGALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQI  305 (521)
Q Consensus       254 ----------------------------~i~~~~~~~~~~~~el~~~l~~~~~~~~v~i~~~~~v~~i~~~~~~~~~~~v  305 (521)
                                                  .....+.............+.+.+...+++++.++.+..........  ..+
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~v~~~~~~~~~~--~~~  242 (534)
T c3nlcA_         165 LYSQVKDPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTXIEKXRATIIELGGEIRFSTRVDDLHXEDGQI--TGV  242 (534)
T ss_dssp             CCCCSCCTTCHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHHHTTCEEESSCCEEEEEESSSBE--EEE
T ss_pred             EEEEHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCEEEECCCCCCEE--EEE
T ss_conf             011000101567899999997699830024785231322203689999999986897999587861010366402--546


Q ss_pred             EECCCCEEEEEEEEECCC
Q ss_conf             988994898345475248
Q batch____       306 ETASGAVLKARSIIVATG  323 (521)
Q Consensus       306 ~~~~g~~l~a~~viiAtG  323 (521)
                      ...++..+.++++|+|||
T Consensus       243 ~~~~~~~i~A~aVIlAtG  260 (534)
T c3nlcA_         243 TLSNGEEIKSRHVVLAVG  260 (534)
T ss_dssp             EETTSCEEECSCEEECCC
T ss_pred             EECCCEEEECCEEEECCC
T ss_conf             732760897787998288