Phyre 2 alignment of P32664 with c3mv2A_

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Job Description | P32664
Confidence | 46.20% | Date | Thu Jan 5 11:49:56 GMT 2012
Rank | 194 | Aligned Residues | 21
% Identity | 5% | Template | c3mv2A_
PDB info | PDB header:protein transport | Chain: A: PDB Molecule:coatomer subunit alpha; | PDBTitle: crystal structure of a-cop in complex with e-cop
Resolution | 2.90 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 98 | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | C | G | Y | C | G | H | E | M | Y | P | S | K | T | E | W | A | M | L | C | S | H | C | R
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |
Template Sequence |  | D | P | L | T | G | S | K | Y | V | I | T | E | K | D | . | . | K | I | D | R | I | A | M
Template Known Secondary structure |  |  | T | T | T |  |  |  |  |  | G | G | G | T | T | . | . | S | B |  | S | S | S | S
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 1166 | . | . | . | 1170 | . | . | . | . | . | . | . | . | . |  |  | 1180 | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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