Phyre 2 alignment of P32664 with c2kreA_

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Job Description | P32664
Confidence | 29.58% | Date | Thu Jan 5 11:49:56 GMT 2012
Rank | 264 | Aligned Residues | 23
% Identity | 4% | Template | c2kreA_
PDB info | PDB header:protein binding | Chain: A: PDB Molecule:ubiquitin conjugation factor e4 b; | PDBTitle: solution structure of e4b/ufd2a u-box domain
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 87 | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | Q | L | A | E | F | Y | R | S | H | K | Y | C | G | Y | C | G | H | E | M | Y | P | S | K
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | I | I | L | R | H | L | L | N | S | P | T | D | P | F | N | R | Q | T | L | T | E | S | M
Template Known Secondary structure |  |  |  |  |  |  | T | T | S |  | S | B |  | S | S | S |  |  | B |  |  | T | T | S
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 1257 | . | . | 1260 | . | . | . | . | . | . | . | . | . | 1270 | . | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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