Phyre 2 alignment of P32664 with c2jmoA_

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Job Description | P32664
Confidence | 30.09% | Date | Thu Jan 5 11:49:56 GMT 2012
Rank | 259 | Aligned Residues | 27
% Identity | 22% | Template | c2jmoA_
PDB info | PDB header:ligase | Chain: A: PDB Molecule:parkin; | PDBTitle: ibr domain of human parkin
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 97 | . | . | 100 |  |  | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . |  |  |  |  |  | . | 120 | . | . | .
Predicted Secondary structure |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |
Query SS confidence |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |
Query Sequence |  | Y | C | G | Y | . | . | C | G | H | E | M | Y | P | S | K | T | E | W | A | M | L | C | S | H | . | . | . | . | . | C | R | E | R | Y
Query Conservation |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |
Alig confidence |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | L | C | P | R | P | G | C | G | A | G | L | L | P | E | P | D | Q | R | K | V | T | C | E | G | G | N | G | L | G | C | G | F | A | F
Template Known Secondary structure |  |  |  |  | S | S | S |  |  |  |  |  |  |  |  | S |  | T | T | S | B |  | T | T | S | S | S | T | T |  |  | S |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 27 | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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