Phyre 2 alignment of P32664 with d1l1oc_

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Job Description | P32664
Confidence | 32.37% | Date | Thu Jan 5 11:49:56 GMT 2012
Rank | 244 | Aligned Residues | 40
% Identity | 18% | Template | d1l1oc_
SCOP info | OB-fold | Nucleic acid-binding proteins | Single strand DNA-binding domain, SSB
Resolution | 2.80

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 98 | . | 100 |  |  | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | C | G | Y | . | . | C | G | H | E | M | Y | P | S | K | T | E | W | A | M | L | C | S | H | C | R | E | R | Y | Y | P | Q | I | A | P | C | I | I | V | A | I | R | R | D | D
Query Conservation |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | C | P | T | Q | D | C | N | K | K | V | I | D | Q | Q | N | G | . | L | Y | R | C | E | K | C | D | . | T | E | F | P | N | F | K | Y | R | M | I | L | S | V | N | I | A | D
Template Known Secondary structure |  |  |  | S | T | T |  |  |  | B |  |  |  |  | T | T | T | . |  |  |  |  | T | T | T | T | . |  |  |  | S | S |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 481 | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . |  | . | . | . | 500 | . | . | . | . |  | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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