Phyre 2 alignment of P32664 with c1ee8A_

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Job Description | P32664
Confidence | 89.10% | Date | Thu Jan 5 11:49:56 GMT 2012
Rank | 100 | Aligned Residues | 28
% Identity | 21% | Template | c1ee8A_
PDB info | PDB header:dna binding protein | Chain: A: PDB Molecule:mutm (fpg) protein; | PDBTitle: crystal structure of mutm (fpg) protein from thermus thermophilus hb8
Resolution | 1.90 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 93 | . | . | . | . | . | . | 100 | . | . | . | . | . | . |  |  | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Query Sequence |  | R | S | H | K | Y | C | G | Y | C | G | H | E | M | Y | . | . | P | S | K | T | E | W | A | M | L | C | S | H | C | R
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | R | E | G | L | P | C | P | A | C | G | R | P | V | E | R | R | V | V | A | G | R | G | T | H | F | C | P | T | C | Q
Template Known Secondary structure |  |  | T | T | S | B |  | T | T | T |  |  | B |  |  |  |  |  | S | S | S |  |  |  |  |  |  | T | T | T | T
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 233 | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | .

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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