Phyre 2 alignment of P32664 with c1nuiA_

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Job Description | P32664
Confidence | 63.55% | Date | Thu Jan 5 11:49:56 GMT 2012
Rank | 163 | Aligned Residues | 27
% Identity | 19% | Template | c1nuiA_
PDB info | PDB header:replication | Chain: A: PDB Molecule:dna primase/helicase; | PDBTitle: crystal structure of the primase fragment of bacteriophage t7 primase-2 helicase protein
Resolution | 2.90 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 98 | . | 100 | . | . | . | . | . |  |  | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Query Sequence |  | C | G | Y | C | G | H | E | M | . | . | Y | P | S | K | T | E | W | A | M | L | C | S | H | C | R | E | R | Y | Y | P
Query Conservation |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | C | D | N | C | G | S | S | D | G | N | S | L | F | S | D | G | . | H | T | F | C | Y | V | C | E | K | W | T | A | T
Template Known Secondary structure |  |  | S | S | S |  |  | S | S |  |  |  |  |  | T | T | S | . |  |  |  |  | T | T | T |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 17 | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . |  | . | . | . | . | . | . | . | 40 | . | . | . | . | .

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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