Phyre 2 alignment of P32664 with c3mkrB_

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Job Description | P32664
Confidence | 38.84% | Date | Thu Jan 5 11:49:56 GMT 2012
Rank | 215 | Aligned Residues | 21
% Identity | 19% | Template | c3mkrB_
PDB info | PDB header:transport protein | Chain: B: PDB Molecule:coatomer subunit alpha; | PDBTitle: crystal structure of yeast alpha/epsilon-cop subcomplex of the copi2 vesicular coat
Resolution | 2.60 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 98 | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | C | G | Y | C | G | H | E | M | Y | P | S | K | T | E | W | A | M | L | C | S | H | C | R
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | C | P | L | S | G | A | . | . | C | Y | S | P | E | F | K | G | Q | I | C | K | V | T | T
Template Known Secondary structure |  |  | T | T | T |  |  | . | . |  |  |  | G | G | G | T | T | S | B |  | T | T | T | S
Template Predicted Secondary structure |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 1185 | . | . | . | . | 1190 |  |  | . | . | . | . | . | . | . | . | . | 1200 | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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