 |
| Job Description | P39177 | | Confidence | 15.12% | Date | Thu Jan 5 11:58:24 GMT 2012 |
| Rank | 40 | Aligned Residues | 36 |
| % Identity | 28% | Template | d1t6aa_ |
| SCOP info | TBP-like
| Rbstp2229 protein
| Rbstp2229 protein
|
| Resolution | 2.05 |
|
|   |   |
1 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | |
. | . | . | . | . | . |
| Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
| Query Sequence |   |
M | Y | K | T | I | I | M | P | V | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
D | V | F | E | M | E | L | S | D | K | A | V | R | H | A | E | F | L | A | Q | D | . |
D | G | V | I | H | L |
| Query Conservation |   |
|   |
|   |
|
|
|   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|
|   |   | . |   |   |   |
|   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
| Template Conservation |   |
  |
|
|   |
|   |   |
|
|   |   |   |   |
|   |   |   |
|
|
|   |
|
|   |   |
|
|
|
|
|
|
|
|
|
|
|   |
|
|   |
|
|
|   |
|   |
|
|
|
|
|
| Template Sequence |   |
L | Y | K | G | X | A | I | S | V | R | T | A | G | E | E | T | F | I | D | I | A | L | P | P | G | A | T | H | G | D | K | G | K | A | N | E | F | S | K | W | L | A | K | T | L | G | G | E | L | H | L |
| Template Known Secondary structure |   |
T |
|
|  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |
|
| T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |
|
| Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
64 | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|