27/01/2012 04:00:30 : INFO  : Run start: Fri Jan 27 04:00:27 GMT 2012
27/01/2012 04:00:42 : INFO  : Initialised job
27/01/2012 04:00:46 : INFO  : Renaming log file 'phyre2_20120127_040026.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/6a2526dbf698df17/phyre_20120127_040026.log'
27/01/2012 04:00:49 : INFO  : Initialised job:
Sequence
>batch____
MRQTLCDGYLVIFALAQAVILLMLTPLFTGISRQIRARMHSRRGPGIWQDYRDIHKLFKR
QEVAPTSSGLMFRLMPWVLISSMLVLAMALPLFITVSPFAGGGDLITLIYLLALFRFFFA
LSGLDTGSPFAGVGASRELTLGILVEPMLILSLLVLALIAGSTHIEMISNTLAMGWNSPL
TTVLALLACGFACFIEMGKIPFDVAEAEQELQEGPLTEYSGAGLALAKWGLGLKQVVMAS
LFVALFLPFGRAQELSLACLLTSLVVTLLKVLLIFVLASIAENTLARGRFLLIHHVTWLG
FSLAALAWVFWLTGL

27/01/2012 04:00:52 : INFO  : Checked sequence
27/01/2012 04:01:00 : INFO  : Finding homologues with PSI-BLAST
27/01/2012 04:01:02 : INFO  : PSI-BLAST 3 iterations
27/01/2012 04:03:16 : INFO  : PSI-BLAST 5 iterations
27/01/2012 04:06:13 : INFO  : Finished PSI-BLAST
27/01/2012 04:06:19 : INFO  : Running Buildali to generate a3m file
27/01/2012 04:17:58 : INFO  : Converting to HMM
27/01/2012 04:18:03 : INFO  : Calibrating HMM
27/01/2012 04:18:21 : INFO  : Searching HMM database
27/01/2012 04:23:36 : INFO  : Finished buildali
27/01/2012 04:23:39 : INFO  : Predicting secondary structure
27/01/2012 04:23:57 : INFO  : Predicted secondary structure (PSI-Pred)
27/01/2012 04:24:00 : INFO  : Predicting Disordered regions
27/01/2012 04:24:08 : INFO  : Predicted Disorder (Disopred)
27/01/2012 04:24:12 : INFO  : Running memsat_svm check
27/01/2012 04:30:08 : INFO  : Running memsat_svm full
27/01/2012 04:45:10 : INFO  : Predicted Transmembrane (memsat_svm) ID '6a2526dbf698df17'
27/01/2012 04:45:13 : INFO  : Initialising fold library search
27/01/2012 04:45:20 : INFO  : Initialised search input
27/01/2012 04:45:24 : INFO  : Building Ensemble models
27/01/2012 04:45:30 : INFO  : Building hh.c3rkoL_.model.1.pdb
27/01/2012 04:46:01 : INFO  : Building c3rkoL_.1.pdb
27/01/2012 04:46:27 : INFO  : Building c1q2iA_.2.pdb
27/01/2012 04:46:56 : INFO  : Building c2jpmA_.3.pdb
27/01/2012 04:47:22 : INFO  : Building d1lbqa_.4.pdb
27/01/2012 04:47:46 : INFO  : Building d1xn8a_.5.pdb
27/01/2012 04:48:13 : INFO  : Building d1ufra_.6.pdb
27/01/2012 04:48:37 : INFO  : Building c3rkoM_.7.pdb
27/01/2012 04:49:07 : INFO  : Building c2k8fB_.8.pdb
27/01/2012 04:49:40 : INFO  : Building c2vxsB_.9.pdb
27/01/2012 04:50:11 : INFO  : Building c2rmrA_.10.pdb
27/01/2012 04:50:44 : INFO  : Building d2hrca1.11.pdb
27/01/2012 04:51:14 : INFO  : Building c2dgrA_.12.pdb
27/01/2012 04:51:45 : INFO  : Building d1jpya_.13.pdb
27/01/2012 04:52:15 : INFO  : Building c3llbA_.14.pdb
27/01/2012 04:52:47 : INFO  : Building d2hk6a1.15.pdb
27/01/2012 04:53:17 : INFO  : Building d1s5qb_.16.pdb
27/01/2012 04:53:49 : INFO  : Building c2dbhA_.17.pdb
27/01/2012 04:54:20 : INFO  : Building d2r2za1.18.pdb
27/01/2012 04:54:50 : INFO  : Building d3lyna_.19.pdb
27/01/2012 04:55:22 : INFO  : Building c3dpgA_.20.pdb
27/01/2012 04:56:29 : INFO  : Finished HH model building
27/01/2012 04:56:33 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
27/01/2012 04:59:20 : INFO  : html domain output complete ID '6a2526dbf698df17'
27/01/2012 05:08:16 : INFO  : Run end  : Fri Jan 27 05:08:13 GMT 2012
