Phyre 2 alignment of P77858 with d1bkba2

Return to main results | Retrieve Phyre Job Id

Job Description | P77858
Confidence | 1.98% | Date | Wed Jan 25 15:21:12 GMT 2012
Rank | 79 | Aligned Residues | 18
% Identity | 33% | Template | d1bkba2
SCOP info | OB-fold | Nucleic acid-binding proteins | Cold shock DNA-binding domain-like
Resolution | 1.75

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 202 | . | . | . |  |  | . | . | . | . | 210 |  |  |  |  | . | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  | . | . |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  | . | . |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |
Query Sequence |  | F | D | V | A | . | . | E | A | E | Q | E | . | . | . | . | L | Q | E | G | P | L | T | E | Y
Query Conservation |  |  |  |  |  | . | . |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  | . | . |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | I | E | V | P | X | K | Y | V | E | E | E | A | K | G | R | L | A | P | G | A | E | V | E | V
Template Known Secondary structure |  |  |  |  |  | G | G | G | B |  |  |  |  |  | T | T |  |  | T | T |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 102 | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions