Phyre 2 alignment of P77858 with c2kvqG_

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Job Description | P77858
Confidence | 2.60% | Date | Wed Jan 25 15:21:12 GMT 2012
Rank | 51 | Aligned Residues | 23
% Identity | 17% | Template | c2kvqG_
PDB info | PDB header:transcription | Chain: G: PDB Molecule:transcription antitermination protein nusg; | PDBTitle: solution structure of nuse:nusg-ctd complex
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 199 | 200 | . | . | . | . | . | . | . | . | . |  | 210 | . | . | . | . | . | . | . | . | . | 220 | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |
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Query Sequence |  | K | I | P | F | D | V | A | E | A | E | Q | . | E | L | Q | E | G | P | L | T | E | Y | S | G
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | R | P | K | T | L | F | E | P | G | E | M | V | R | V | N | D | G | P | F | A | D | F | N | G
Template Known Secondary structure |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  | S | S | T | T | T | T |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 123 | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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