Phyre 2 alignment of P77858 with c2kwvA_

Return to main results | Retrieve Phyre Job Id

Job Description | P77858
Confidence | 1.78% | Date | Wed Jan 25 15:21:12 GMT 2012
Rank | 98 | Aligned Residues | 14
% Identity | 43% | Template | c2kwvA_
PDB info | PDB header:protein binding/signaling protein | Chain: A: PDB Molecule:dna polymerase iota; | PDBTitle: solution structure of ubm1 of murine polymerase iota in complex with2 ubiquitin
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 198 | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | G | K | I | P | F | D | V | A | E | A | E | Q | E | L | Q | E | G
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |
Template Sequence |  | K | Q | L | P | A | D | I | Q | E | . | . | . | E | I | L | S | G
Template Known Secondary structure |  | T | T | S |  |  |  |  |  |  | . | . | . |  |  | T | T |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 506 | . | . | . | 510 | . | . | . | . |  |  |  | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions