BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (300 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P77746 Uncharacterized HTH-type transcriptional regulat... 611 e-174 UniRef50_UPI0001826721 hypothetical protein EcanA3_12211 n=1 Tax... 317 3e-85 UniRef50_B5XZT9 Transcriptional regulator, LysR family n=5 Tax=K... 283 5e-75 UniRef50_C9XYN5 Uncharacterized HTH-type transcriptional regulat... 280 4e-74 UniRef50_C5BHM7 Transcriptional regulator, LysR family n=2 Tax=E... 179 9e-44 UniRef50_A5F3E5 Transcriptional regulator, LysR family n=29 Tax=... 135 2e-30 UniRef50_P30979 Uncharacterized HTH-type transcriptional regulat... 133 8e-30 UniRef50_B4TAI7 LysR-family transcriptional regulator n=40 Tax=E... 132 1e-29 UniRef50_D2YJX0 Transcriptional regulator, LysR family n=1 Tax=V... 127 5e-28 UniRef50_Q7MEK1 Transcriptional regulator n=15 Tax=Vibrionaceae ... 114 5e-24 UniRef50_D0YJS8 Transcriptional regulator, LysR family n=2 Tax=K... 113 1e-23 UniRef50_C1M9D8 Predicted protein n=2 Tax=Citrobacter RepID=C1M9... 99 2e-19 UniRef50_A6EYC4 LysR family regulatory protein n=1 Tax=Marinobac... 99 2e-19 UniRef50_Q1ZB78 Transcriptional regulator, LysR family protein n... 98 4e-19 UniRef50_Q2S713 Transcriptional regulator n=1 Tax=Hahella chejue... 98 4e-19 UniRef50_A6CXP0 Transcriptional regulator, LysR family protein n... 98 4e-19 UniRef50_Q1R0T8 Transcriptional regulator, LysR family n=9 Tax=G... 98 4e-19 UniRef50_B0TPA4 Transcriptional regulator, LysR family n=2 Tax=S... 96 1e-18 UniRef50_Q1MWN1 LysR-type regulatory protein n=1 Tax=Sphingomona... 96 2e-18 UniRef50_A8H3B3 Transcriptional regulator, LysR family n=7 Tax=G... 96 2e-18 UniRef50_Q7W2A6 Transcriptional regulator n=3 Tax=Bordetella Rep... 95 3e-18 UniRef50_A5KW47 Transcriptional regulator, LysR family protein n... 94 7e-18 UniRef50_Q7MC61 Transcriptional regulator n=9 Tax=Gammaproteobac... 93 1e-17 UniRef50_A9C385 Transcriptional regulator, LysR family n=2 Tax=c... 93 1e-17 UniRef50_Q2IYM8 Transcriptional regulator, LysR family n=2 Tax=R... 92 2e-17 UniRef50_A9R140 Substrate-binding transcriptional regulator, Lys... 92 2e-17 UniRef50_P46924 Probable HTH-type transcriptional regulator leuO... 92 2e-17 UniRef50_B9Z480 Transcriptional regulator, LysR family n=1 Tax=L... 92 3e-17 UniRef50_B5ET44 Transcriptional regulator n=1 Tax=Vibrio fischer... 92 3e-17 UniRef50_B1KAV0 Transcriptional regulator, LysR family n=5 Tax=B... 90 8e-17 UniRef50_B4X4B4 LysR substrate binding domain protein n=1 Tax=Al... 90 1e-16 UniRef50_Q486J0 Transcriptional regulator, LysR family n=4 Tax=G... 90 1e-16 UniRef50_B7WQP0 Transcriptional regulator, LysR family n=1 Tax=C... 89 1e-16 UniRef50_Q8YZV2 Transcriptional regulator n=2 Tax=Nostocaceae Re... 89 2e-16 UniRef50_Q32IV1 Putative transcriptional regulator LYSR-type n=1... 88 3e-16 UniRef50_Q15UP0 Transcriptional regulator, LysR family n=4 Tax=A... 88 4e-16 UniRef50_A1WRT3 Transcriptional regulator, LysR family n=1 Tax=V... 88 4e-16 UniRef50_A6CX36 Transcriptional regulator n=1 Tax=Vibrio shiloni... 88 4e-16 UniRef50_A0NZC9 LysR family regulatory protein n=3 Tax=Rhodobact... 88 4e-16 UniRef50_Q0SCY7 Transcriptional regulator, LysR family protein n... 87 5e-16 UniRef50_Q5LKP3 Transcriptional regulator, LysR family n=1 Tax=R... 87 6e-16 UniRef50_B7VH72 Transcriptional regulator n=4 Tax=Vibrionales Re... 87 1e-15 UniRef50_A8H6N4 Transcriptional regulator, LysR family n=3 Tax=S... 86 1e-15 UniRef50_Q473Q1 Transcriptional regulator, LysR family n=9 Tax=B... 86 1e-15 UniRef50_A7K354 LysR substrate binding domain protein n=17 Tax=G... 86 1e-15 UniRef50_A6D744 Putative transcriptional regulator n=1 Tax=Vibri... 86 2e-15 UniRef50_D0RY94 Transcriptional regulator n=4 Tax=Acinetobacter ... 86 2e-15 UniRef50_A8H681 Transcriptional regulator, LysR family n=2 Tax=G... 86 2e-15 UniRef50_B8E7T8 Transcriptional regulator, LysR family n=7 Tax=S... 85 3e-15 UniRef50_Q12M05 Transcriptional regulator n=3 Tax=Gammaproteobac... 85 4e-15 UniRef50_D0XIC6 Putative uncharacterized protein n=1 Tax=Vibrio ... 84 5e-15 UniRef50_B5F9Z3 Transcriptional regulator, LysR family n=3 Tax=V... 84 6e-15 UniRef50_A3KIZ0 Putative LysR-family transcriptional regulatory ... 84 6e-15 UniRef50_B4T6D9 Putative transcriptional regulator n=36 Tax=Salm... 83 1e-14 UniRef50_Q87IK7 Putative LysR-family transcriptional regulator n... 83 1e-14 UniRef50_A6AYH0 Transcriptional regulator n=3 Tax=Vibrio parahae... 83 1e-14 UniRef50_B7VQ63 Transcriptional regulators, LysR family n=3 Tax=... 83 1e-14 UniRef50_A8LRQ2 Transcriptional regulator, LysR family n=1 Tax=D... 82 2e-14 UniRef50_A1JL35 Putative LysR-family transcriptional regulatory ... 82 2e-14 UniRef50_Q1ZAV3 Transcriptional regulators, LysR family protein ... 82 2e-14 UniRef50_Q5P743 Transcriptional regulator, LysR family n=2 Tax=B... 82 3e-14 UniRef50_B5JUQ0 Transcriptional regulator, LysR family, putative... 82 3e-14 UniRef50_A6V8B0 Transcriptional regulator, LysR family n=10 Tax=... 81 5e-14 UniRef50_Q5E2I6 DNA-binding transcriptional activator n=65 Tax=G... 81 5e-14 UniRef50_A6VUW1 Transcriptional regulator, LysR family n=2 Tax=M... 80 8e-14 UniRef50_A6ARN3 Transcriptional regulator, LysR family n=4 Tax=V... 80 9e-14 UniRef50_A6CV60 Transcriptional regulator, LysR family protein n... 80 9e-14 UniRef50_B2VHH8 Transcriptional regulator, LysR family n=1 Tax=E... 80 1e-13 UniRef50_Q3KA14 LysR family regulatory protein n=24 Tax=Bacteria... 80 1e-13 UniRef50_Q7MCM8 Transcriptional regulator n=8 Tax=Vibrionaceae R... 79 1e-13 UniRef50_D1TCI7 LysR family transcriptional regulator n=2 Tax=Bu... 79 2e-13 UniRef50_A5WDE8 Transcriptional regulator, LysR family n=1 Tax=P... 79 2e-13 UniRef50_A4BGW0 Probable transcription regulator protein n=1 Tax... 79 2e-13 UniRef50_Q085G5 Transcriptional regulator, LysR family n=1 Tax=S... 79 2e-13 UniRef50_A5L763 Transcriptional regulator n=1 Tax=Vibrionales ba... 79 2e-13 UniRef50_C5A8T0 Transcriptional regulator, LysR family protein n... 79 3e-13 UniRef50_C3MFM7 Putative transcriptional regulator, LysR family ... 78 3e-13 UniRef50_A1U2R6 Transcriptional regulator, LysR family n=3 Tax=M... 78 5e-13 UniRef50_A6T413 Transcriptional regulator, LysR family n=1 Tax=J... 77 6e-13 UniRef50_B0C5B7 Transcriptional regulator, LysR-family n=1 Tax=A... 77 6e-13 UniRef50_B7VJC4 Putative LysR-like regular protein n=4 Tax=Vibri... 77 6e-13 UniRef50_A6FDU8 Transcriptional regulator, LysR family protein n... 77 1e-12 UniRef50_A6B1R6 Transcriptional regulator n=1 Tax=Vibrio parahae... 76 1e-12 UniRef50_B9Z947 Transcriptional regulator, LysR family n=1 Tax=L... 76 1e-12 UniRef50_B9JQ31 Transcriptional regulator n=1 Tax=Agrobacterium ... 76 2e-12 UniRef50_A8GKS5 Transcriptional regulator, LysR family n=1 Tax=S... 76 2e-12 UniRef50_Q2S7V2 Transcriptional regulator n=1 Tax=Hahella chejue... 76 2e-12 UniRef50_Q0VLU8 Transcriptional regulator, LysR family n=2 Tax=A... 75 2e-12 UniRef50_B7VQ45 Transcriptional regulator n=8 Tax=Vibrionales Re... 75 3e-12 UniRef50_B7VJR0 Transcriptional regulator n=7 Tax=Vibrionaceae R... 75 3e-12 UniRef50_Q15TE0 Transcriptional regulator, LysR family n=4 Tax=A... 75 3e-12 UniRef50_Q13QG3 Transcriptional regulator, LysR family n=9 Tax=P... 75 4e-12 UniRef50_B4S2V4 Transcriptional regulator, LysR family protein n... 74 4e-12 UniRef50_D0RZK6 Transcriptional regulator n=1 Tax=Acinetobacter ... 74 4e-12 UniRef50_C2LG43 LysR-family transcriptional regulator n=4 Tax=En... 74 4e-12 UniRef50_A3YHF6 Transcriptional regulatory protein n=2 Tax=Gamma... 74 5e-12 UniRef50_Q13JD9 Transcriptional regulator, LysR family n=1 Tax=B... 74 5e-12 UniRef50_A0JW61 Transcriptional regulator, LysR family n=1 Tax=A... 74 5e-12 UniRef50_A7HRT9 Transcriptional regulator, LysR family n=1 Tax=P... 74 6e-12 UniRef50_A5V6I2 Transcriptional regulator, LysR family n=1 Tax=S... 74 6e-12 UniRef50_A4GJC2 Transcriptional regulator LysR family protein n=... 74 6e-12 UniRef50_Q2G901 Transcriptional regulator, LysR family n=2 Tax=A... 74 7e-12 UniRef50_B2JSH4 Transcriptional regulator, LysR family n=2 Tax=B... 74 7e-12 UniRef50_C7RKX8 Transcriptional regulator, LysR family n=20 Tax=... 74 7e-12 UniRef50_A3YI62 Transcriptional regulator, LysR family protein n... 74 7e-12 UniRef50_Q0BYJ0 Transcriptional regulator, LysR family n=1 Tax=H... 74 9e-12 UniRef50_A0LD88 Transcriptional regulator, LysR family n=1 Tax=M... 73 9e-12 UniRef50_Q47ZN8 Transcriptional regulator, LysR family n=1 Tax=C... 73 1e-11 UniRef50_A6CVD4 Transcriptional regulator, LysR family protein n... 73 1e-11 UniRef50_Q0ARX0 Transcriptional regulator, LysR family n=1 Tax=M... 73 1e-11 UniRef50_A8KZI9 Transcriptional regulator, LysR family n=4 Tax=A... 73 1e-11 UniRef50_Q081K6 Transcriptional regulator, LysR family n=2 Tax=A... 73 1e-11 UniRef50_C4U6X1 LysR-family transcriptional regulatory protein n... 72 2e-11 UniRef50_A0LD87 Transcriptional regulator, LysR family n=1 Tax=M... 72 2e-11 UniRef50_B7RWY7 LysR substrate binding domain protein n=2 Tax=un... 72 2e-11 UniRef50_B9J825 Nod transcriptional regulator protein n=1 Tax=Ag... 72 2e-11 UniRef50_Q1YVH2 Transcriptional regulator, LysR family protein n... 72 2e-11 UniRef50_D0ZGN3 Transcriptional regulator n=2 Tax=Edwardsiella R... 72 2e-11 UniRef50_B7RV99 Transcriptional regulator, LysR family protein n... 72 3e-11 UniRef50_Q5E1I8 Transcriptional regulator, LysR family n=3 Tax=V... 72 3e-11 UniRef50_C6XR04 Transcriptional regulator, LysR family n=1 Tax=H... 72 3e-11 UniRef50_B8KV86 Putative transcriptional regulator, LysR family ... 72 3e-11 UniRef50_Q7MEL0 Transcriptional regulator n=18 Tax=Gammaproteoba... 72 3e-11 UniRef50_B1MJW3 Putative transcriptional regulator, LysR family ... 71 4e-11 UniRef50_Q081Z6 Transcriptional regulator, LysR family n=1 Tax=S... 71 4e-11 UniRef50_A9BUT0 Transcriptional regulator, LysR family n=5 Tax=C... 71 4e-11 UniRef50_A8GG55 Transcriptional regulator, LysR family n=1 Tax=S... 71 4e-11 UniRef50_D0XC19 Putative uncharacterized protein n=1 Tax=Vibrio ... 71 4e-11 UniRef50_B5ZVD7 Transcriptional regulator, LysR family n=4 Tax=R... 71 4e-11 UniRef50_A4XX96 Transcriptional regulator, LysR family n=3 Tax=P... 71 4e-11 UniRef50_C4U8I2 LysR-family transcriptional regulatory protein n... 71 5e-11 UniRef50_C6XIT5 Transcriptional regulator, LysR family n=1 Tax=H... 71 5e-11 UniRef50_Q13GK2 Transcriptional regulator, LysR family n=1 Tax=B... 71 5e-11 UniRef50_A9AQX4 Transcriptional regulator, LysR family n=20 Tax=... 71 5e-11 UniRef50_A9G5G2 Nodulation protein D n=2 Tax=Proteobacteria RepI... 71 6e-11 UniRef50_Q1N663 Regulatory protein, LysR:LysR, substrate-binding... 71 6e-11 UniRef50_A4YPA1 Putative transcriptional regulator, LysR family ... 70 6e-11 UniRef50_A5VCH0 Transcriptional regulator, LysR family n=1 Tax=S... 70 6e-11 UniRef50_B5XRQ2 Transcriptional regulator, LysR family n=4 Tax=K... 70 7e-11 UniRef50_A3Y808 Transcriptional regulator, LysR family protien n... 70 7e-11 UniRef50_A9BZQ9 Transcriptional regulator, LysR family n=1 Tax=D... 70 7e-11 UniRef50_A3QJ07 Transcriptional regulator, LysR family n=25 Tax=... 70 8e-11 UniRef50_C6B2W9 Transcriptional regulator, LysR family n=4 Tax=R... 70 8e-11 UniRef50_A1R1P0 Putative transcriptional regulator, LysR family ... 70 8e-11 UniRef50_Q2SKI3 Transcriptional regulator n=3 Tax=Oceanospirilla... 70 1e-10 UniRef50_A0KKG7 HTH-type transcriptional regulator YidZ n=3 Tax=... 69 1e-10 UniRef50_Q4KCL9 Transcriptional regulator, LysR family n=15 Tax=... 69 1e-10 UniRef50_Q3KIF1 Putative LysR-family transcriptional regulator n... 69 1e-10 UniRef50_Q5LVV7 Transcriptional regulator, LysR family n=2 Tax=R... 69 1e-10 UniRef50_B7VP76 Transcriptional regulator (Lys R family) n=2 Tax... 69 2e-10 UniRef50_A7JY23 Transcriptional regulator LysR family n=3 Tax=Vi... 69 2e-10 UniRef50_Q13YH7 Transcriptional regulator, LysR family n=12 Tax=... 69 2e-10 UniRef50_A6E126 Transcriptional regulator, LysR family protein n... 69 2e-10 UniRef50_A0KG94 Transcriptional regulator, LysR family n=5 Tax=G... 69 2e-10 UniRef50_A4XRF8 Transcriptional regulator, LysR family n=2 Tax=P... 69 2e-10 UniRef50_A5W6Q9 Transcriptional regulator, LysR family n=12 Tax=... 69 2e-10 UniRef50_Q39AY8 Transcriptional regulator, LysR family n=1 Tax=B... 69 2e-10 UniRef50_A8H854 Transcriptional regulator, LysR family n=1 Tax=S... 69 2e-10 UniRef50_A8IJ97 Putative transcriptional regulator n=1 Tax=Azorh... 69 2e-10 UniRef50_P10183 HTH-type transcriptional activator nahR n=67 Tax... 69 2e-10 UniRef50_UPI0001B54141 LysR family transcriptional regulator n=1... 69 3e-10 UniRef50_Q5DZ29 Transcriptional regulator, LysR family n=2 Tax=V... 69 3e-10 UniRef50_A9F1C1 Transcriptional regulator, LysR family n=1 Tax=S... 68 3e-10 UniRef50_B0KG68 Transcriptional regulator, LysR family n=9 Tax=P... 68 4e-10 UniRef50_A1UYG7 Transcriptional regulator, LysR family n=45 Tax=... 68 4e-10 UniRef50_D1SW87 Transcriptional regulator, LysR family n=1 Tax=A... 68 4e-10 UniRef50_C4KB22 Transcriptional regulator, LysR family n=37 Tax=... 68 4e-10 UniRef50_A3RSL5 Transcriptional regulators, LysR family n=4 Tax=... 68 5e-10 UniRef50_C5CZA2 Transcriptional regulator, LysR family n=1 Tax=V... 68 5e-10 UniRef50_Q89IY7 Transcriptional regulatory protein n=1 Tax=Brady... 67 6e-10 UniRef50_Q7D3Y4 Transcriptional regulator, LysR family n=3 Tax=P... 67 6e-10 UniRef50_B0C7Y6 Transcriptional regulator, LysR family n=1 Tax=A... 67 6e-10 UniRef50_A1U796 Transcriptional regulator, LysR family n=3 Tax=M... 67 7e-10 UniRef50_C3KKF8 Putative transcriptional regulatory protein, Lys... 67 7e-10 UniRef50_A1K8D7 Transcriptional regulator, LysR family n=1 Tax=A... 67 7e-10 UniRef50_Q5E5X9 Transcriptional regulator, LysR family n=2 Tax=V... 67 7e-10 UniRef50_A6EW06 Transcriptional regulator n=2 Tax=Marinobacter R... 67 7e-10 UniRef50_Q9RH96 LeuO homolog (Fragment) n=28 Tax=Salmonella ente... 67 7e-10 UniRef50_Q9FD34 PnbR n=2 Tax=Pseudomonas RepID=Q9FD34_PSEPU 67 8e-10 UniRef50_C9NTB9 LysR-like transcriptional regulator n=5 Tax=Vibr... 67 8e-10 UniRef50_B6R1K2 Transcriptional regulator, LysR family n=1 Tax=P... 67 8e-10 UniRef50_B7VQM7 Transcriptional regulators, LysR family protein ... 67 9e-10 UniRef50_A6V5Q0 MexT protein n=1 Tax=Pseudomonas aeruginosa PA7 ... 67 1e-09 UniRef50_A6W1I8 Transcriptional regulator, LysR family n=2 Tax=M... 66 1e-09 UniRef50_C0ZNV8 Putative LysR family transcriptional regulator n... 66 1e-09 UniRef50_A0Z258 Transcriptional regulator, LysR family protein n... 66 1e-09 UniRef50_Q1T7B6 Putative LysR-type transcriptional activator n=1... 66 1e-09 UniRef50_B9Z7Z3 Transcriptional regulator, LysR family n=3 Tax=P... 66 1e-09 UniRef50_Q7VQS7 LysR-family transcriptional regulator n=2 Tax=Ca... 66 1e-09 UniRef50_Q1XGL2 Transcriptional activator NahR n=3 Tax=root RepI... 66 1e-09 UniRef50_B7CP85 Transcriptional regulator, LysR family protein n... 66 1e-09 UniRef50_Q2CK92 Transcriptional regulator, LysR family protein n... 66 2e-09 UniRef50_A1WMY5 Transcriptional regulator, LysR family n=1 Tax=V... 66 2e-09 UniRef50_Q2KYC5 LysR-family transcriptional regulator n=9 Tax=Bu... 66 2e-09 UniRef50_C6DDI5 Transcriptional regulator, LysR family n=4 Tax=E... 66 2e-09 UniRef50_Q8XRG7 Probable transcriptional regulator transcription... 65 2e-09 UniRef50_B4RWU1 Transcriptional regulator n=2 Tax=Alteromonas ma... 65 2e-09 UniRef50_A4SH82 Transcriptional regulator, LysR family n=2 Tax=A... 65 2e-09 UniRef50_A1SEI3 Transcriptional regulator, LysR family n=1 Tax=N... 65 2e-09 UniRef50_B9B1S8 Transcriptional regulator, LysR family n=1 Tax=B... 65 2e-09 UniRef50_A3JPL5 Transcriptional regulator, LysR family protein n... 65 2e-09 UniRef50_B5XW08 Transcriptional regulator, LysR family n=9 Tax=E... 65 3e-09 UniRef50_B4E7M9 LysR family regulatory protein n=1 Tax=Burkholde... 65 3e-09 UniRef50_A5VEA0 Transcriptional regulator, LysR family n=1 Tax=S... 65 3e-09 UniRef50_A5F4D9 Transcriptional regulator, LysR family n=68 Tax=... 65 4e-09 UniRef50_B0BQD1 HTH-type transcriptional activator n=15 Tax=Prot... 64 4e-09 UniRef50_A4SSQ1 Transcriptional regulator, LysR family n=2 Tax=A... 64 5e-09 UniRef50_Q471I4 Regulatory protein, LysR:LysR, substrate-binding... 64 5e-09 UniRef50_A8T595 Transcriptional regulator, LysR family, putative... 64 5e-09 UniRef50_Q11CG0 Transcriptional regulator, LysR family n=1 Tax=C... 64 5e-09 UniRef50_D2TGJ2 Putative LysR-family transcriptional regulator n... 64 6e-09 UniRef50_B6AU51 Transcriptional regulator, LysR family, putative... 64 7e-09 UniRef50_C8WFJ3 Transcriptional regulator, LysR family n=3 Tax=Z... 64 7e-09 UniRef50_B8ERS8 Transcriptional regulator, LysR family n=1 Tax=M... 64 7e-09 UniRef50_A6CUQ2 Putative transcription regulator protein n=1 Tax... 64 8e-09 UniRef50_C6C4P6 Transcriptional regulator, LysR family n=4 Tax=P... 64 8e-09 UniRef50_A8V9B9 LysR-like regulatory protein n=2 Tax=Betaproteob... 64 8e-09 UniRef50_B1K4K0 Transcriptional regulator, LysR family n=3 Tax=B... 64 9e-09 UniRef50_Q15SK5 Transcriptional regulator, LysR family n=9 Tax=G... 64 9e-09 UniRef50_A6W028 Transcriptional regulator, LysR family n=1 Tax=M... 64 9e-09 UniRef50_Q3S4D5 LysR-like regular protein n=1 Tax=Polaromonas na... 63 1e-08 UniRef50_B7VU21 Transcriptional regulators, LysR family n=1 Tax=... 63 1e-08 UniRef50_A0KIB7 Transcriptional regulator, LysR family n=2 Tax=A... 63 1e-08 UniRef50_Q87I72 Putative transcriptional regulator, LysR family ... 63 1e-08 UniRef50_C6BS61 Transcriptional regulator, LysR family n=1 Tax=D... 63 1e-08 UniRef50_C6ARG9 Transcriptional regulator, LysR family n=7 Tax=P... 63 1e-08 UniRef50_A1W256 Transcriptional regulator, LysR family n=2 Tax=C... 63 1e-08 UniRef50_A9FJR3 Transcriptional regulator, LysR family n=2 Tax=S... 63 1e-08 UniRef50_A1VMI6 Transcriptional regulator, LysR family n=28 Tax=... 63 1e-08 UniRef50_A8FYY5 Transcriptional regulator, LysR family n=2 Tax=S... 63 1e-08 UniRef50_A2VZL6 Transcriptional regulator n=1 Tax=Burkholderia c... 63 1e-08 UniRef50_UPI0001BCC5DA LysR family transcriptional regulator n=1... 63 1e-08 UniRef50_Q1GMN1 Transcriptional regulator, LysR family n=1 Tax=R... 62 2e-08 UniRef50_B8IW67 Transcriptional regulator, LysR family n=1 Tax=M... 62 2e-08 UniRef50_B2JTT0 Transcriptional regulator, LysR family n=3 Tax=B... 62 2e-08 UniRef50_Q12H69 Transcriptional regulator, LysR family n=14 Tax=... 62 2e-08 UniRef50_A6CYC8 Probable transcription regulator protein n=1 Tax... 62 2e-08 UniRef50_A6EZR5 Transcriptional regulator, LysR family protein n... 62 2e-08 UniRef50_C5CV67 Transcriptional regulator, LysR family n=1 Tax=V... 62 2e-08 UniRef50_B5ZKB2 Transcriptional regulator, LysR family n=2 Tax=G... 62 2e-08 UniRef50_Q38ZY8 Transcriptional regulator, LysR family n=1 Tax=B... 62 2e-08 UniRef50_Q15XK7 Transcriptional regulator, LysR family n=1 Tax=P... 62 2e-08 UniRef50_A5V8P8 Transcriptional regulator, LysR family n=1 Tax=S... 62 3e-08 UniRef50_Q46T42 Regulatory protein, LysR:LysR, substrate-binding... 62 3e-08 UniRef50_Q1YUH5 Nodulation protein d1 n=1 Tax=gamma proteobacter... 62 3e-08 UniRef50_Q16B23 Transcriptional regulator, LysR family, putative... 62 3e-08 UniRef50_UPI000190F23D putative DNA-binding transcriptional regu... 62 4e-08 UniRef50_Q5E7C7 Transcriptional regulator, LysR family n=5 Tax=V... 61 4e-08 UniRef50_B5XYZ1 Transcriptional regulator, LysR family n=5 Tax=K... 61 4e-08 UniRef50_Q4KKE5 Transcriptional regulator, LysR family n=27 Tax=... 61 4e-08 >UniRef50_P77746 Uncharacterized HTH-type transcriptional regulator ybdO n=94 Tax=Enterobacteriaceae RepID=YBDO_ECOLI Length = 300 Score = 611 bits (1576), Expect = e-174, Method: Compositional matrix adjust. Identities = 300/300 (100%), Positives = 300/300 (100%) Query: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS Sbjct: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 Query: 61 GKGIAPTTTGLNLHHHLEKNLRGLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCL 120 GKGIAPTTTGLNLHHHLEKNLRGLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCL Sbjct: 61 GKGIAPTTTGLNLHHHLEKNLRGLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCL 120 Query: 121 RQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNR 180 RQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNR Sbjct: 121 RQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNR 180 Query: 181 HPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAV 240 HPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAV Sbjct: 181 HPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAV 240 Query: 241 TDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 TDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF Sbjct: 241 TDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 >UniRef50_UPI0001826721 hypothetical protein EcanA3_12211 n=1 Tax=Enterobacter cancerogenus ATCC 35316 RepID=UPI0001826721 Length = 299 Score = 317 bits (813), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 157/296 (53%), Positives = 214/296 (72%) Query: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 MANLYDLKKFDLNLLVIFECIYQ+LSISKAAE+LYITPSAVSQSLQRLR Q NDPLFIRS Sbjct: 1 MANLYDLKKFDLNLLVIFECIYQNLSISKAAETLYITPSAVSQSLQRLRNQLNDPLFIRS 60 Query: 61 GKGIAPTTTGLNLHHHLEKNLRGLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCL 120 GKGI PTT G+NLHHHLE+NL LEQTINI++ S LKKNF+IY PQ+++ + I+ L Sbjct: 61 GKGITPTTVGVNLHHHLEQNLNQLEQTINIMHSSGLKKNFVIYCPQILTPNILLDPIKLL 120 Query: 121 RQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNR 180 + EIE HD+++S ++AE LL +RKADLV PV +RS+ C H ++ L+C Sbjct: 121 MDKHNYEIELHDVMVSPDSAENLLAYRKADLVFAIAPVNNRSLACNLFHKLQMNLVCRKG 180 Query: 181 HPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAV 240 HPR++ + T + ++ E+F +S +GV Q +I+ R +SFR S LTI++ + V Sbjct: 181 HPRLSVSPTRQDLLNEKFAAYLSDGSGVKTFQEKIEHALPERTVSFRSDSYLTILSMLTV 240 Query: 241 TDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRL 296 +DL+G+VP + Y D L LK ++ + +P++ +++ YN+S+LN+ VFS FI+ + Sbjct: 241 SDLVGVVPENAFRQYGDALGLKVLETDIAIPTVDIFMLYNRSALNSSVFSSFIEEI 296 >UniRef50_B5XZT9 Transcriptional regulator, LysR family n=5 Tax=Klebsiella RepID=B5XZT9_KLEP3 Length = 310 Score = 283 bits (724), Expect = 5e-75, Method: Compositional matrix adjust. Identities = 144/293 (49%), Positives = 193/293 (65%), Gaps = 1/293 (0%) Query: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 MANLYDLKKFDLNLLVIFECIYQHLSISKAA L+ITPSAVSQSLQRLR Q NDPLF+R Sbjct: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAAMLFITPSAVSQSLQRLRQQLNDPLFVRV 60 Query: 61 GKGIAPTTTGLNLHHHLEKNLRGLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCL 120 GKG+ PTT +NLH+HL++NL LE+TIN+ N+SEL+K +IYGP L N+ +I L Sbjct: 61 GKGMTPTTACVNLHYHLQQNLEQLEKTINLNNRSELRKRIVIYGPPLFCSVNSHFMINEL 120 Query: 121 RQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNR 180 ++++IE H+ L + E+AEELL +R+ADLV T+MP+ +R+ IC P T++ +C Sbjct: 121 CHQANLQIEHHN-LTTTESAEELLAYRQADLVFTRMPITNRATICQPYQTVQTLAVCRAD 179 Query: 181 HPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAV 240 HPR ++ E + E FT I+ + +Q I+FR S +TI+N I Sbjct: 180 HPRRDQLTSIEALAQEFFTHYITNDPVIQRVQQSSTPWLNPGNIAFRSDSFMTILNMINK 239 Query: 241 TDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFI 293 TDL+G +P LY+ + L + +E P I +YI+Y++SS N S I Sbjct: 240 TDLIGFIPSYLYDFISPAMPLHALDIEALFPEITIYINYHQSSTQNHFLSELI 292 >UniRef50_C9XYN5 Uncharacterized HTH-type transcriptional regulator ybdO n=3 Tax=Cronobacter RepID=C9XYN5_CROTZ Length = 334 Score = 280 bits (716), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 139/300 (46%), Positives = 191/300 (63%) Query: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 MANL DLKKFDLNLLVIFECIY + S+SKAAE+L++TPSA+SQSLQRLR Q NDPLF+RS Sbjct: 15 MANLQDLKKFDLNLLVIFECIYLYRSVSKAAEALFLTPSAISQSLQRLRNQLNDPLFVRS 74 Query: 61 GKGIAPTTTGLNLHHHLEKNLRGLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCL 120 GKGI PTT G NLHH+LE NL LEQTIN++ + L+KNF++Y P ++ + L+ Sbjct: 75 GKGITPTTVGTNLHHYLEDNLNQLEQTINMMQGAPLRKNFVLYCPPALAADHLPGLVSAF 134 Query: 121 RQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNR 180 R+ E+E +D +++E AE+LL +RKADL+I PV S SVIC + L+CS Sbjct: 135 REHYDFELEHYDTSLASETAEDLLAYRKADLIIGMAPVTSHSVICKHCFSEETVLVCSEN 194 Query: 181 HPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAV 240 HPR+ D++ + E+FT + G ++ E R+I+F +SL +I+ I Sbjct: 195 HPRLGDHADDAALAQEKFTLFNGTAEGQKHYHVKSGELIGERQIAFTSNSLSSIMAIIGS 254 Query: 241 TDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 TD +GI+P YR L+ +KL LP Y+ YN++SL N F F+ + + F Sbjct: 255 TDFIGILPAPALRRYRQVFGLRPVKLNFSLPHYDYYLIYNRASLTNASFVSFVSLIEQHF 314 >UniRef50_C5BHM7 Transcriptional regulator, LysR family n=2 Tax=Edwardsiella RepID=C5BHM7_EDWI9 Length = 314 Score = 179 bits (455), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 101/308 (32%), Positives = 163/308 (52%), Gaps = 21/308 (6%) Query: 2 ANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSG 61 +NL LK FDLNLL +FE ++ H S+S+AA ++ TPSAVSQSLQ+LR F+DPLFIR+G Sbjct: 7 SNLLHLKGFDLNLLTVFEMVFLHNSVSRAAAAMGTTPSAVSQSLQKLRQHFDDPLFIRAG 66 Query: 62 KGIAPTTTGLNLHHHLEKNLRGLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 KGI+PT G+ LH + + L +E T+N ++ ++ F+++ P ++ + L Sbjct: 67 KGISPTALGVCLHDQIAQGLSLIENTLNATLSAKQRRKFVVFAPCCVALQVLPAAVSALE 126 Query: 122 Q----------DSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTI 171 + + H I AE+LL RKAD+V + PV + +V C+P Sbjct: 127 RLGVGYELLHYSEYADYHPHTI------AEQLLNFRKADVVFSTTPVTAHAVHCLPFANE 180 Query: 172 RNTLICSNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSL 231 L+C + HPR+ + + Q+ E F L + D ++ R S Sbjct: 181 PLALVCRDGHPRLGEACSEVQLSGERFVILQRAHSDGDRFAF-----LHGGRVVLRSDSF 235 Query: 232 LTIINSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSR 291 ++I+ ++ +DLL ++P E+ Y L+ ++ +P I LY++YNK SL N F Sbjct: 236 ISILGVVSHSDLLTVLPREVALRYGASFKLRVVETAFAIPPISLYLTYNKLSLRNPEFRN 295 Query: 292 FIDRLNES 299 +D L ++ Sbjct: 296 LLDVLMDT 303 >UniRef50_A5F3E5 Transcriptional regulator, LysR family n=29 Tax=Vibrio RepID=A5F3E5_VIBC3 Length = 308 Score = 135 bits (340), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 86/284 (30%), Positives = 149/284 (52%), Gaps = 12/284 (4%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 L+ +DLNLL +F+ + + S+SKAA+ L +T +AVSQ+L RLR Q DPLFIR G+G+ P Sbjct: 4 LRDYDLNLLTVFDSVMKLGSVSKAADKLGMTSAAVSQNLSRLREQVGDPLFIRQGRGLQP 63 Query: 67 TTTGLNLHHHLEKNLR----GLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQ 122 T LN+H H+ + L GLE + + K+ FII G +L L++ Sbjct: 64 TQYALNMHKHVAEGLSAIRFGLETDAGF-DPATSKREFIIGGQGYFDL---VVLPPLLQK 119 Query: 123 DSSVEIECHDILMSAEN----AEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICS 178 S + L S E+ ++L R+ADL + +P+ S++ + ++ + Sbjct: 120 ISDIAPHITVNLKSYEDDHFTPSQVLSEREADLFLAALPISHPSIVTTQVAEEALVVVYA 179 Query: 179 NRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSI 238 HPR+ ++EQ AE+ T L S+ G +D+ R++ ++ S+L ++ + Sbjct: 180 KNHPRLGSTLSFEQFFAEKHTALTSRRFGNYLFSSLVDQVLPARRVHYQSESMLNLMATA 239 Query: 239 AVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKS 282 +VTDLL P L + + + L L+ L + S+ ++ ++K+ Sbjct: 240 SVTDLLCFTPKRLADMWAEKLGLQIQPLPFEIRSVPTFMCWHKA 283 >UniRef50_P30979 Uncharacterized HTH-type transcriptional regulator ybeF n=45 Tax=Enterobacteriaceae RepID=YBEF_ECOLI Length = 317 Score = 133 bits (334), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 90/299 (30%), Positives = 147/299 (49%), Gaps = 12/299 (4%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 L+ DLNLL IFE +Y H I AA+ L +TPSA+SQS+Q+LR F DPLFIR G+G+ P Sbjct: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 Query: 67 TTTGLNLHHHLEKNLRGLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSV 126 T ++LH ++ + L + ++I + ++ I + ++ R ++ Sbjct: 86 TAFAMHLHEYISQGLESILGALDIEGSYDKQRTITIATTPSVGALVLPVIYRAIKTHYPQ 145 Query: 127 EIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRITD 186 + + + AEN L + DL+I M +R+V L T LIC +P ++ Sbjct: 146 LLLRNPPISDAENQ---LSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSL 202 Query: 187 NSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLGI 246 E I L+ + ++ + E F +R+I+F ++LTI +A +D+L I Sbjct: 203 EDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAI 262 Query: 247 VPYELYNSYRDFLNLKEIKLEHPLPS-----IKLYISYNKSSLNNLVFSRFIDRLNESF 300 +P YN + L+++ P PS I I YNK SL + + ID + +F Sbjct: 263 IPSRFYNLFSRCWPLEKL----PFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNAF 317 >UniRef50_B4TAI7 LysR-family transcriptional regulator n=40 Tax=Enterobacteriaceae RepID=B4TAI7_SALHS Length = 317 Score = 132 bits (333), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 90/299 (30%), Positives = 160/299 (53%), Gaps = 12/299 (4%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 L+ DLNLL IFE +Y H I AA+ L +TPSA+SQS+Q+LR F DPLFIR G+G+ P Sbjct: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKILNLTPSAISQSIQKLRTIFPDPLFIRKGQGVTP 85 Query: 67 TTTGLNLHHHLEKNLRGLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSV 126 TT +LH ++ + L + +++ + K+ I G + S ++++ + Q ++ Sbjct: 86 TTYATHLHEYISQGLESILGALDLTGSYD-KQRTITIG---TTPSVGALVMPIIYQ--AI 139 Query: 127 EIECHDILM---SAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPR 183 +L+ ++AE L + DL+I +RS+ L + ++C HP Sbjct: 140 RPRYPQLLLRNIPVDDAESQLSQFQTDLIINTHSYNNRSIQHHVLFSDTLEIVCRQHHPC 199 Query: 184 ITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDL 243 + + T E++ + + T L+ + + ++ + E F +++ISF ++ TI + IA +DL Sbjct: 200 LANAITEERLNSADHTFLMLEGQHLSLLRQRLQETFPDQQISFSSYNIFTIASLIASSDL 259 Query: 244 LGIVPYELYNSYRDFLNLKEIKLEHPLPS--IKLYISYNKSSLNNLVFSRFIDRLNESF 300 LG++P Y+ + L+ + P+ S ++ + YNK SL + V ID + E+F Sbjct: 260 LGLMPTRFYDLFSRCWPLERLPYA-PVNSEQVEFSLHYNKLSLRDPVLENVIDIIREAF 317 >UniRef50_D2YJX0 Transcriptional regulator, LysR family n=1 Tax=Vibrio mimicus VM573 RepID=D2YJX0_VIBMI Length = 314 Score = 127 bits (319), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 86/302 (28%), Positives = 151/302 (50%), Gaps = 12/302 (3%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 L+ +DLNLL +F+ + S++KAA+ L +T +AVSQ+L RLR Q +PLFIR G+G+ P Sbjct: 15 LRDYDLNLLTVFDAVMTLGSVNKAADKLNMTSAAVSQNLSRLRDQVGEPLFIRQGRGLQP 74 Query: 67 TTTGLNLHHHLEKNLR----GLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQ 122 T LN+H H+ L GLE T + + + F+I G +L + LR+ Sbjct: 75 TQYALNMHKHVSAGLSAIRFGLE-TNACFDPATSTREFVIGGHGYFDL---VVLPQLLRK 130 Query: 123 DSSVEIECHDILMSAEN----AEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICS 178 S V L E+ ++L R+ADL + +P+ S+I + ++ + Sbjct: 131 ISEVAPHITVNLKPYEDDHFTPSQVLSEREADLFLASLPISHPSIITTQIAEEALVVVYA 190 Query: 179 NRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSI 238 HPR+ + T++Q E+ T L S+ G +D+ RK+ ++ S+L ++ + Sbjct: 191 KNHPRLGETLTFQQFFDEKHTALTSRRFGHYLFSSLLDQALPARKVHYQSDSMLNLMATA 250 Query: 239 AVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 +VTDLL P L + + + L L L + + ++ ++K+ + +++ E Sbjct: 251 SVTDLLCFTPKRLADMWAEKLGLHIQPLPFEMRPVPTFMCWHKAKQQDKGLIWLREQIEE 310 Query: 299 SF 300 F Sbjct: 311 VF 312 >UniRef50_Q7MEK1 Transcriptional regulator n=15 Tax=Vibrionaceae RepID=Q7MEK1_VIBVY Length = 307 Score = 114 bits (284), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 73/270 (27%), Positives = 139/270 (51%), Gaps = 6/270 (2%) Query: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 M + + +K DLNL+ IF I++ ++SKAA L I+ AVS++L RLR +++PLF RS Sbjct: 1 MCSRFAMKNTDLNLIPIFVAIFEEQNLSKAAARLDISQPAVSKALARLRDIYDEPLFHRS 60 Query: 61 GKGIAPTTTGLNLHHHLEKNLRGLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCL 120 G+ PT+ ++++ + + T++ ++ E K + I+ +S ++ ++ + L Sbjct: 61 PSGVEPTSFAVDIYPAMLTAFKNFTSTLSASSEFEAKVSNRIFSIACVSVASYELMPQLL 120 Query: 121 RQ----DSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLI 176 +Q ++ +E H + E+ E L ++ DL+I P ++ P+ + R ++ Sbjct: 121 KQIRQHAPNISLEVHPLF--TEDYESDLRLQRYDLIIDMAPRGWTTLKVEPIFSERLMVV 178 Query: 177 CSNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIIN 236 C HPRI D + Q +AEE + A + E RKI++R S L ++ Sbjct: 179 CCADHPRIADACSVAQFLAEEHVVVSRWHARKSLMSAEDIADLAKRKIAYRASGALEMLP 238 Query: 237 SIAVTDLLGIVPYELYNSYRDFLNLKEIKL 266 I ++ +G++P N++ N+K + L Sbjct: 239 VIHGSEYIGMLPESTINAFAGTYNIKAVSL 268 >UniRef50_D0YJS8 Transcriptional regulator, LysR family n=2 Tax=Klebsiella RepID=D0YJS8_KLEVA Length = 319 Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 82/299 (27%), Positives = 139/299 (46%), Gaps = 12/299 (4%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 L+ DLNLL IFE +Y H I AA+ L ITPSA+SQS+ +LRA F DPLFIR G+G+ P Sbjct: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKILNITPSAISQSINKLRALFPDPLFIRKGQGVMP 85 Query: 67 TTTGLNLHHHLEKNLRGLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCLR---QD 123 T +LH ++ + + ++I ++ I + ++LI + + Sbjct: 86 TAYATHLHQYISRGMEAFLSALDIAGSPHQQRVITI----ATTPGMGALLIPIVASALKP 141 Query: 124 SSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPR 183 + +I H+I ++ +A L R+ DL+I +++ L+ R + C HP Sbjct: 142 AFPQILLHNIAIT--DAARQLDQRQVDLLIDTHLHSGQAISHHVLYQDRVRMYCRAEHPA 199 Query: 184 ITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDL 243 + + EF L+ + + + E R+ F +LLT IA +D+ Sbjct: 200 LHGPQDEAHLAQYEFALLLPEGQRYPTLHRRLQEEMGERRCGFSTFNLLTQAAMIAESDM 259 Query: 244 LGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYIS--YNKSSLNNLVFSRFIDRLNESF 300 LG+ L+ L+ + H L K+ ++ YNK S + I+ + ++F Sbjct: 260 LGLTTERLFAMVSRLWPLQTLDF-HSLQDEKINVALHYNKQSGKEPLLKEIIETVIQAF 317 >UniRef50_C1M9D8 Predicted protein n=2 Tax=Citrobacter RepID=C1M9D8_9ENTR Length = 308 Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 79/278 (28%), Positives = 131/278 (47%), Gaps = 2/278 (0%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 L K DLNLL IF IY SIS+ A+ L I+PSAVSQSL++LR D LF+RSG + P Sbjct: 13 LSKIDLNLLTIFCLIYSVGSISRVADMLNISPSAVSQSLRKLREMMGDNLFVRSGNALLP 72 Query: 67 TTTGLNLHHHLEKNLRGLEQTINIVNKSELKKNFIIYGPQLIS-CSNNSMLIRCLRQDSS 125 T L+ + + L T+ ++ KK +Y IS + R + D+ Sbjct: 73 TVYSDELYDNTIPIIDKL-STLMPLSTPATKKRLTLYTESFISPIVIPDVTARIIETDAD 131 Query: 126 VEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRIT 185 + + ++ ++ ELL R+AD V + V S S+ C + +R L S + Sbjct: 132 ISLLHLTADLNEQSIIELLNMRQADAVFSTFAVESASLSCQKICDMRLVLAASQNNSLYG 191 Query: 186 DNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLG 245 + + Q +K+ + + +D++F + SS I+ ++ T LG Sbjct: 192 NTISEAQFRNANLVGYNTKNEKIIYHRSIVDKKFRTGERCLLTSSFTAILTIVSNTHCLG 251 Query: 246 IVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSS 283 ++P +++ ++ LK+I PLP ++ S K S Sbjct: 252 VIPEKVFETHAQLYGLKKINTPFPLPQFSVFASSRKES 289 >UniRef50_A6EYC4 LysR family regulatory protein n=1 Tax=Marinobacter algicola DG893 RepID=A6EYC4_9ALTE Length = 300 Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 71/298 (23%), Positives = 140/298 (46%), Gaps = 8/298 (2%) Query: 6 DLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIA 65 +L+ DLNLL +F+ I + +S+AA+SL ++ A+S +LQRLR DPLF+R+ +G+ Sbjct: 4 NLRSVDLNLLPVFDAIMEAGQLSRAADSLGMSQPAISAALQRLRHTLGDPLFVRTHQGMV 63 Query: 66 PTTTGLNLHHHLEKNLRGLEQTINIVNK---SELKKNFIIYGPQLISCSNNSMLIRCLRQ 122 PT LH L + L + T++ N+ ++ F + L+ LR Sbjct: 64 PTPRARELHRSLSQQLGAMRDTLDPANRFVPGTSQRRFRVLSNDYFEMVVLPTLLTRLRS 123 Query: 123 DS-SVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 ++ +V +E + ++ ++ + L +ADL + + + L R ++ H Sbjct: 124 EAPNVVVE---VALAGDDMPQRLYTAEADLAVDAFATENDRLRRQVLLAERLAVVARKDH 180 Query: 182 PRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVT 241 P + D+ + +Q + E L ++ + Q+ ++E R+ R + +++ + + + Sbjct: 181 PDLWDDCSKQQFLDAEHVVLPDRNRRLPLDQI-LNEPGWQRRTGARVTQFASMLATCSRS 239 Query: 242 DLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNES 299 D++ VP L Y LK + +P + +Y+ + N+ F RL ES Sbjct: 240 DMIATVPERLAQQYARAFGLKTLPFPVEVPPLPVYLLWAPVMDNDPAHIWFRQRLMES 297 >UniRef50_Q1ZB78 Transcriptional regulator, LysR family protein n=1 Tax=Photobacterium profundum 3TCK RepID=Q1ZB78_PHOPR Length = 305 Score = 97.8 bits (242), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 75/285 (26%), Positives = 134/285 (47%), Gaps = 10/285 (3%) Query: 8 KKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPT 67 K FDLNLL +F +Y S +KAAE L +T S+VS ++ RL+ + LFIR+G+GI PT Sbjct: 5 KHFDLNLLRVFLSVYNTCSFTKAAEELDLTQSSVSNAILRLKKTVGEELFIRAGRGIQPT 64 Query: 68 TTGLNLHHHLEKNLRGLEQTINIVNKSE---LKKNFIIYGPQLISCSNNSMLIRCLRQDS 124 L+H LE ++ +EQT+N + + + F +Y + + L + L+ D Sbjct: 65 AVANQLYHQLENSMLKVEQTVNSFEQFDPLHTAREFHVYAIESVIHILQPRLDKYLK-DY 123 Query: 125 SVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLIC---SNRH 181 + I H++ + + L + D+V+ ++ V+ + I + +C S H Sbjct: 124 APTIIFHELPAQEQQMYDQLQAEQIDVVLD---IVQPDVVSLSSEAILSEKMCCVVSRHH 180 Query: 182 PRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVT 241 PRI + + EQ + E + + ER RK+ SSL++++ + A + Sbjct: 181 PRINEVLSKEQFLEESHVFFNMRRFNLTIADYFTYERLPYRKMYCEHSSLMSMLATTARS 240 Query: 242 DLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNN 286 + + + PY L L+ I + I +++ + NN Sbjct: 241 EAISMAPYSLAKQCEGMFELRLIDSPYKTKPINIFMVWPSRLKNN 285 >UniRef50_Q2S713 Transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S713_HAHCH Length = 329 Score = 97.8 bits (242), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 71/254 (27%), Positives = 128/254 (50%), Gaps = 23/254 (9%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 ++ DLNLLVIF+ I SIS AAE L +T AVS ++ R+R +NDPLF+++G+GI P Sbjct: 1 MRNIDLNLLVIFDAIMTESSISGAAERLSMTQPAVSNAVARMRQVWNDPLFVKNGRGIQP 60 Query: 67 TTTGLNLHHHLEKNLRGLEQTINI--VNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDS 124 TT L+L H + L L+ +N + S ++ F + G I+ + +R + + Sbjct: 61 TTHALSLWHQVSGPLIQLKDAVNPQDFDPSTTRRRFRV-GMSDITTDLIWLPMRRMVETE 119 Query: 125 SVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTL------ICS 178 + I+ H + + N+E +L + + DL++ M S RN +C+ Sbjct: 120 APNIDLHAVPANGNNSESILTNGEVDLIVGVMQEFRTS--------FRNDFLFESDYVCA 171 Query: 179 NR--HPRITDNSTYEQIMAEE--FTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTI 234 R HP + T E+ + + L ++ G DI + ++ ++R+++ + ++ Sbjct: 172 MRKDHPLAAEPLTLEKYLKADHLLVSLTGEATGFVDITLS--QQGLSRRVAMTVNHFASV 229 Query: 235 INSIAVTDLLGIVP 248 + +DL+ IVP Sbjct: 230 PALLEGSDLISIVP 243 >UniRef50_A6CXP0 Transcriptional regulator, LysR family protein n=2 Tax=Vibrionaceae RepID=A6CXP0_9VIBR Length = 310 Score = 97.8 bits (242), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 86/289 (29%), Positives = 132/289 (45%), Gaps = 34/289 (11%) Query: 8 KKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPT 67 KKFDLNLL +F Y+ S++K+AE L +T SAVS +L RL+ LF R+G+GI PT Sbjct: 12 KKFDLNLLRVFISTYETESVTKSAERLDLTQSAVSNALTRLKENVGKELFSRTGRGIKPT 71 Query: 68 TTGLNL----HHH---LEKNLRGLEQTINIVNKSELKKNFIIYGPQLISCSNNSML---- 116 L H H +EK ++GLE + + ++ F++Y C +ML Sbjct: 72 RYAKELYEQTHDHIMSIEKVIQGLE----AFDPKKTQRTFVVY------CHEAAMLRLQK 121 Query: 117 -IRCLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTL 175 + ++EI ++ E L K DLVI P S+ LH+ T Sbjct: 122 RLHVCTTYPNIEIILKELPPKDARIYEDLQMEKVDLVIDVSPSDSKVFQSELLHSEGLTC 181 Query: 176 ICSNRHPRIT----DNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSL 231 + S HPRI D S Y M E L + + ++ + E RK+ + SSL Sbjct: 182 VASKNHPRIQQGKFDKSNY---MTESHVLLNIRRHNLTFVEWLVSEVLPPRKVFSQHSSL 238 Query: 232 LTIINSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLP-SIKLYISY 279 L ++ S++ + + ++P + Y D L+ P P K + SY Sbjct: 239 LGMLPSVSNSQAIAVIPLSVAEQYSDIFQLQTF----PFPFETKTFDSY 283 >UniRef50_Q1R0T8 Transcriptional regulator, LysR family n=9 Tax=Gammaproteobacteria RepID=Q1R0T8_CHRSD Length = 308 Score = 97.8 bits (242), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 69/277 (24%), Positives = 134/277 (48%), Gaps = 3/277 (1%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 ++ DLNL+ F +Y+ S++ AA L +T +VS SL RLR F+DPLF R+ G+AP Sbjct: 1 MRPIDLNLVRTFVTLYESGSVTLAAHKLNVTQPSVSYSLSRLRELFDDPLFSRTRDGMAP 60 Query: 67 TTTGLNLHHHLEKNLRGLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCLR--QDS 124 T + L+ + L +EQT++ + +++ + L ++L LR +D Sbjct: 61 TFCAMRLYTSFRQALTQIEQTLSDAQHFDPEQSQRRFRLALTDLGETTLLAPILRHMRDL 120 Query: 125 SVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRI 184 + +E + + + ++ D VI + + S+ P+ R + RHPRI Sbjct: 121 APGVELEVVPLEIDKVVSWFDNKSVDAVICSRDIQAPSLGRRPIIEERYVGLLGRRHPRI 180 Query: 185 TDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLL 244 + E E+ Q +S + G ++ + ER + RK+S + + T LL Sbjct: 181 GQTLSMEAFSREDHVQ-VSPTTGHGLVEDVLKERDITRKVSVVVPHFSALPRLLESTSLL 239 Query: 245 GIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNK 281 I+P ++ + +LK+++L +P +++ + +++ Sbjct: 240 AILPEQIAGLFTQQADLKQVELPFDIPPVEVALYWSR 276 >UniRef50_B0TPA4 Transcriptional regulator, LysR family n=2 Tax=Shewanella RepID=B0TPA4_SHEHH Length = 301 Score = 95.9 bits (237), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 84/284 (29%), Positives = 136/284 (47%), Gaps = 42/284 (14%) Query: 8 KKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPT 67 K+FD+NLL +F + + S + AAE L +T +VS ++ R +A + LF+R+G+ I PT Sbjct: 5 KQFDVNLLRVFLAVCRTGSYTLAAEELDLTQPSVSNAINRFKAVVGEELFVRAGRNIKPT 64 Query: 68 TTGLNLHHHLEKNLRGLEQTINIV-----NKSELKKNFIIYGPQLISCSNNSMLIRCLRQ 122 L L + +EQTIN + N SE + F++ +I+ ML R L + Sbjct: 65 AMANYLFEQLNDSFCNIEQTINGLEGFDPNTSE--RQFVVLANDVIA----HMLQRRLDE 118 Query: 123 ---DSSVEIECHDILMSAENAEELLVHRKADLVIT-QMP---------VISRSVICMPLH 169 D +EI + ELL +ADLVI +P +I + +C Sbjct: 119 LVKDLPIEIIFREPPDFDSEILELLTLEQADLVIDIGLPEDNRFERKLLIQEAAVC---- 174 Query: 170 TIRNTLICSNRHPRITDNSTYEQIMAEE--FTQLISKSAGVDDIQMEIDERFMNRKISFR 227 + S HPRI ++ ++EQ AE F +L + DI E E NRK+ Sbjct: 175 ------VASKEHPRIQESISWEQFFAERHVFVKLRRFNRTAVDILSE--EVLPNRKVYSS 226 Query: 228 GSSLLTIINSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLP 271 SS+L++ ++++ +D +G+ P N + NL+ + PLP Sbjct: 227 KSSMLSLFSAVSTSDAIGVAPRNYSNDFEKVFNLQLL----PLP 266 >UniRef50_Q1MWN1 LysR-type regulatory protein n=1 Tax=Sphingomonas sp. A4 RepID=Q1MWN1_9SPHN Length = 302 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 85/300 (28%), Positives = 142/300 (47%), Gaps = 32/300 (10%) Query: 4 LYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKG 63 + ++ DLNLL +FEC++Q + +AAE L I+ AVS +L++LR ND LF+R+ G Sbjct: 1 MVKIRDVDLNLLRVFECVFQTRKVVEAAEILGISQPAVSNALKKLRELLNDELFVRTRSG 60 Query: 64 IAPTTTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFII---------YGPQLISCS 111 + PT + L + L+ LE I + K++F+I +GP+LIS Sbjct: 61 MIPTQYAMQLAEPISYALKTLEIAIEASESFDPRRDKRHFVIATSDLGDMYFGPKLISH- 119 Query: 112 NNSMLIRCLRQDSSVEIECHD---ILMSAENAE-ELLVHRKADLVITQMPVISRSVICMP 167 IR + QD ++E + I S EN E ++L+ + DL IT M V Sbjct: 120 -----IRDISQDITIEFVGNSRPHIFESLENGEVDILLGFRPDL-ITNMFVFR------- 166 Query: 168 LHTIRNTLICSNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFR 227 L ++ HP + + E ++A + + S+ +G + E+ + M+R I Sbjct: 167 LFYQGWRILARKDHPIFSSKAPREDLLACRWIGVRSEGSGSASVNAELLKVGMDRNIVVW 226 Query: 228 GSSLLTIINSIAVTDLLGIVPYELYNSYRD-FLNLKEIKLEHPLPSIKLYISYNKSSLNN 286 S+ T+ +AV DL VP E+Y + D LK + LP + ++ + N+ Sbjct: 227 TSNFGTLAPLLAVGDLAACVP-EIYTTVIDEAFGLKSMPFPVDLPKHSISSVWHSKAHND 285 >UniRef50_A8H3B3 Transcriptional regulator, LysR family n=7 Tax=Gammaproteobacteria RepID=A8H3B3_SHEPA Length = 304 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 80/273 (29%), Positives = 130/273 (47%), Gaps = 16/273 (5%) Query: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 M N D K+FD NLLVIF +YQ SI+ AA+SL +T VS +L+RL+A LF+R Sbjct: 1 MGNNMD-KRFDFNLLVIFLEVYQLRSITLAADSLGLTQPGVSAALKRLQATLGVELFVRE 59 Query: 61 GKGIAPTTTGLNLHHHLEKNLRGLEQTINIVNK--SELKKNFIIYGPQLISCSNNSMLIR 118 G+GI+PT + L + + ++ V + ++F++Y + ++L Sbjct: 60 GRGISPTNAAIQLASQVSPAYNTVNSALSNVAGFDKQTPRSFLVY----VDEPMMNLLQP 115 Query: 119 CLRQDSSVEIECHDILMSAENAEELLVH----RKADLVI--TQMPVISRSVICMPLHTIR 172 QDS + C + EE L+ +KADL I Q+P +S S ++ Sbjct: 116 LAEQDSDMG-NCEIMFQLPPIEEERLLQQLSLQKADLAIDVGQLPSLSYSNQLFYRESV- 173 Query: 173 NTLICSNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLL 232 T+IC HPRI Q E+ L + A + + +E RK+S SLL Sbjct: 174 -TMICRKGHPRINGKIGKIQFYQEKHITLQIRRATLTALDFFTEEVIGERKVSCECHSLL 232 Query: 233 TIINSIAVTDLLGIVPYELYNSYRDFLNLKEIK 265 +++ ++ +D + I + + Y D L+ I+ Sbjct: 233 SMMALVSESDCIAITSRSIADKYADKFGLQSIE 265 >UniRef50_Q7W2A6 Transcriptional regulator n=3 Tax=Bordetella RepID=Q7W2A6_BORPA Length = 313 Score = 94.7 bits (234), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 71/270 (26%), Positives = 130/270 (48%), Gaps = 11/270 (4%) Query: 8 KKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPT 67 K DLNLL+IF+ I +++AAE L ++ SAVS+ L +LR F DPLF+R+ +G+ PT Sbjct: 4 KHLDLNLLMIFDAILAEGHVTRAAERLAMSQSAVSKGLAQLRQAFGDPLFLRASRGVVPT 63 Query: 68 TTGLNLHHHLEKNLRGLEQTINIVNKSELK---KNFIIYGPQLISCSNNSMLIRCLRQDS 124 L + + + + L V + + + +F I +S L+R L++ + Sbjct: 64 HRALEIADQVRQAIAALNSLAGPVTEFDARSAHAHFNIGATDYVSFVLLPGLMRRLQETA 123 Query: 125 S-VEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPR 183 V + HD M + EE+L+ K DLVI+ + ++ + L +C HP Sbjct: 124 PHVSLTLHD--MESMMPEEMLLAGKVDLVISSVASVNFPIYRQELFRDHYVCLCRAGHPA 181 Query: 184 ITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERF-MNRKISFRGSSLLTIINSIAVTD 242 + D EQ ++ + ++ + + + +R + R ++ + +L I ++ TD Sbjct: 182 LADPVPIEQFVSSRHLAMPRQNGARERVLQDTLQRLGVTRDVAVQVPHMLAIPATLTATD 241 Query: 243 LLGIVPYELYNSYRDFLNLKEIK-LEHPLP 271 L+ + + R+F ++ L HPLP Sbjct: 242 LVATMACRV---AREFAARHPLQVLAHPLP 268 >UniRef50_A5KW47 Transcriptional regulator, LysR family protein n=1 Tax=Vibrionales bacterium SWAT-3 RepID=A5KW47_9GAMM Length = 297 Score = 93.6 bits (231), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 79/260 (30%), Positives = 124/260 (47%), Gaps = 12/260 (4%) Query: 9 KFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTT 68 KFDLNLL IF +YQ S++KAAE L +T SA+S SL RL++ LF R+G+G+ PT Sbjct: 4 KFDLNLLRIFSVVYQQGSVTKAAEHLDLTQSAISNSLNRLKSSLGQELFNRTGRGVKPTR 63 Query: 69 TGLNLHHHLEKNLRGLEQTINIVNKSELK--KNFIIYGPQLISCSNNSMLIRCLRQDSSV 126 L+ L+ +L ++ + V + FI+Y + I + L R L + Sbjct: 64 FAQELYEQLQFSLMEIDTVMEGVTHFNVDHPHRFIVYSHEAIFHTLRQSLDRKL-AGKPI 122 Query: 127 EIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTI-RNTLIC---SNRHP 182 E+ +I + LV+ K DLVI ISR M ++ R +C + HP Sbjct: 123 EVLLVEIPSDETRIYDDLVNEKIDLVID----ISRPQGAMFQSSVLREEQLCCIVRHNHP 178 Query: 183 RITDNSTYEQIMAEEFTQLISKSA-GVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVT 241 R+ S ++ +E L + + + DE RK SLL +I +++ + Sbjct: 179 RMNLESINKESYLQERHALFDLTRLNLKFVDWITDEVLPQRKAYSEHKSLLGMIEAVSYS 238 Query: 242 DLLGIVPYELYNSYRDFLNL 261 D +G+VP + Y+ NL Sbjct: 239 DAVGVVPLSVAKRYQKAFNL 258 >UniRef50_Q7MC61 Transcriptional regulator n=9 Tax=Gammaproteobacteria RepID=Q7MC61_VIBVY Length = 313 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 74/277 (26%), Positives = 126/277 (45%), Gaps = 4/277 (1%) Query: 10 FDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTT 69 DLNLL F+ + + S+++AAE+L IT AVS +L RLR Q+ DPLFIR G+GI PT Sbjct: 15 MDLNLLKTFDVVMKTRSVNEAAETLGITAPAVSHALNRLRDQYQDPLFIRQGRGITPTNF 74 Query: 70 GLNLHHHLEKNLRGL---EQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSV 126 + LH +++ L L ++ N + F + + I L+ L Q + Sbjct: 75 AIELHAEIQEPLSLLLNGAKSRQQFNPDTSHRTFRLSSHKDIDLMLLPPLMDHLAQHAPN 134 Query: 127 EIECHDI-LMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRIT 185 C D+ + + + L RK D+++ +P L + ++C HPRI Sbjct: 135 VKLCADVEHLDERDRQADLRTRKVDMILATVPFDEHGYHNELLFELPLVMVCRQDHPRIQ 194 Query: 186 DNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLG 245 + T++Q AE+ +K D + E R I+++ S I A TD + Sbjct: 195 NTITHQQFFAEQHLLWETKRQNQDIVDSLALEPQPQRNIAYKTGSSCNAIMMAAQTDWIC 254 Query: 246 IVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKS 282 + + L+ + L L + +Y++++ S Sbjct: 255 VTGQWHADLMAKAHQLQVMPLPFKLNKLPIYMTWHHS 291 >UniRef50_A9C385 Transcriptional regulator, LysR family n=2 Tax=cellular organisms RepID=A9C385_DELAS Length = 332 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 79/287 (27%), Positives = 137/287 (47%), Gaps = 32/287 (11%) Query: 6 DLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIA 65 +L+ DLNLLVIFE + + S+ KAA L IT SAVS +L+RLR QFNDPL +R+ +G++ Sbjct: 16 NLRSIDLNLLVIFEALVEERSVGKAAARLGITSSAVSHALRRLRTQFNDPLLLRTAEGMS 75 Query: 66 PTTTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNF---------IIYGPQLISCSNN 113 PT + L K +E I + + + ++NF ++ PQL C Sbjct: 76 PTPEAVRLARSFRKAFSEIESAIEVSKGFDPATARRNFHLRLSDYVGVLLLPQL--C--- 130 Query: 114 SMLIRCLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRN 173 + +R + S+ ++ D ++ E V + L +++ RSV+ + + Sbjct: 131 -IHLRAVAPGISLSVQSFDGRQPSDRVEYEGVEIR--LSVSR----GRSVLSASRRLLDD 183 Query: 174 TLICSNR--HPRITDNSTYEQIMAEEFTQLIS-KSAGVDDIQMEIDERFMNRKISFRGSS 230 + R HP T E+ + + ++ S+ VD++ + ER + R++ F+ + Sbjct: 184 QWMVLMRKDHPAAASPLTLEKYLEQGHLKVTGVGSSIVDEL---LAERGLARRVMFQVPT 240 Query: 231 LLTIINSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYI 277 L ++ I TDL+ +P +S N + PLP + L I Sbjct: 241 WLGMVPVIESTDLVAAMPAHWMHSVLSGSNC--VARPMPLPELALSI 285 >UniRef50_Q2IYM8 Transcriptional regulator, LysR family n=2 Tax=Rhodopseudomonas palustris RepID=Q2IYM8_RHOP2 Length = 317 Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 73/281 (25%), Positives = 130/281 (46%), Gaps = 30/281 (10%) Query: 6 DLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIA 65 +L+ DLNLL++F+ +Y +IS AA L ++ AVS +L RLR F+DPLF+R+G+G+ Sbjct: 5 NLRNVDLNLLIVFDAVYATGNISHAARQLALSQPAVSNALTRLREHFDDPLFVRAGRGVK 64 Query: 66 PTTTGLNLHHHLEKNLRGLEQTINIVNKSEL---KKNFIIYGPQLISCSNNSMLIRCLRQ 122 PT + + + LR + Q + +L K+ F I +I +ML+ + + Sbjct: 65 PTLRSQQMIEPVREALRLIRQQFDGDRSLDLGSYKRTFRI----VIVDPLEAMLMPTMLR 120 Query: 123 DSSVEIECHDILMSAE-------NAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTL 175 EI H ++ E N + ++ DL PV + ++ + + + Sbjct: 121 ----EISAHAPQVTIESRPPWNTNVADAIIAGTLDLACYTFPVSAPGLVFKTICPCDHVI 176 Query: 176 ICSNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTII 235 + HP+I E ++ LI + G +I +I R NR+I++ + + ++ Sbjct: 177 VARRGHPKIGATLDAETFLSLAQVALIPELRGHTNIDRDITTRGGNRRIAYMVNKVWSMP 236 Query: 236 NSIAVTDLLGIVPYELYNSYRDFLNLKEIK-----LEHPLP 271 + TDL+ ++P R F L K E P+P Sbjct: 237 GVVGSTDLVTVMP-------RRFAELMAPKFGLQIFESPIP 270 >UniRef50_A9R140 Substrate-binding transcriptional regulator, LysR family n=34 Tax=Enterobacteriaceae RepID=A9R140_YERPG Length = 322 Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 73/282 (25%), Positives = 139/282 (49%), Gaps = 10/282 (3%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 L+ DLNLL +F+ + Q ++++AA+SL ++ AVS ++ RL+ FND LF+R G+GI P Sbjct: 26 LRSVDLNLLTVFDAVMQMQNVTRAAQSLGMSQPAVSNAVARLKVMFNDELFVRYGRGIQP 85 Query: 67 TTTGLNLHHHLEKNLRGLEQTINIVN----KSELKKNFIIYGPQLISCSNNSMLIRCLRQ 122 T L + + L+ ++ + SE N I P + + + +++ ++Q Sbjct: 86 TARARQLFGPVRQALQLVQNELPGAGFEAKNSERLFNLSICSPLDVRLA--AQIVQRVKQ 143 Query: 123 DS-SVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 + +V++ L +N E L +++ + VI +PL L S H Sbjct: 144 SAPNVQLVIKSYL--NDNIEHQLRYQETEFVIGYTEFDRPDFHRIPLFKDELVLAVSKDH 201 Query: 182 PRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVT 241 PRI D+ T Q+++E ++S + D + I++ + + +++N ++ T Sbjct: 202 PRINDSITENQLLSESHA-VVSLDKKGSFSEPYYDSTTSTQSIAYESTDMNSVLNIVSQT 260 Query: 242 DLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSS 283 + I P L +Y + LNLK I L S Y+++++S+ Sbjct: 261 YFVAIAPRWLVKTYSEALNLKLISLPWENTSRACYLTWHEST 302 >UniRef50_P46924 Probable HTH-type transcriptional regulator leuO n=122 Tax=Gammaproteobacteria RepID=LEUO_SALTY Length = 314 Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 71/288 (24%), Positives = 135/288 (46%), Gaps = 22/288 (7%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 L+ DLNLL +F+ + Q +I++AA +L ++ AVS ++ RL+ FND LF+R G+GI P Sbjct: 19 LRMVDLNLLTVFDAVMQEQNITRAAHTLGMSQPAVSNAVARLKVMFNDELFVRYGRGIQP 78 Query: 67 TTTGLNLHHHLEKNLR---------GLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLI 117 T L + + L+ G E T SE N + P +N + Sbjct: 79 TARAFQLFGSVRQALQLVQNELPGSGFEPT-----SSERVFNLCVCSP-----LDNILTS 128 Query: 118 RCLRQDSSVEIECHDILMSA--ENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTL 175 + + + H + ++ +N E L +++ + VI+ +PL L Sbjct: 129 QIYNRVEKIAPNIHVVFKASLNQNTEHQLRYQETEFVISYEEFRRPEFTSVPLFKDEMVL 188 Query: 176 ICSNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTII 235 + S +HPRI+ + E+ ++S Q D ++++G +L++++ Sbjct: 189 VASRKHPRISGPLLEGDVYNEQHA-VVSLDRYASFSQPWYDTPDKQSSVAYQGMALISVL 247 Query: 236 NSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSS 283 N ++ T L+ I P L + + L+L+ + L L S Y+S+++++ Sbjct: 248 NVVSQTHLVAIAPRWLAEEFAESLDLQILPLPLKLNSRTCYLSWHEAA 295 >UniRef50_B9Z480 Transcriptional regulator, LysR family n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z480_9NEIS Length = 303 Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 69/249 (27%), Positives = 112/249 (44%), Gaps = 7/249 (2%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 ++ D+ LL +F+ IY+ S+++AA++L + AVS +L +LR F+DPLF+R G+ P Sbjct: 1 MQTADVRLLQVFDEIYKTRSVTRAADNLGLGQPAVSIALAKLREHFDDPLFVRIANGMEP 60 Query: 67 TTTGLNLHHHLEKNLRGLEQTIN---IVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQD 123 T L H + + L L+ + + ++ F I + S +L + Q Sbjct: 61 TPMARELEHAVRQALDALDLVFGHRIDFDPASSERTFCI---SMTDISQLVLLPKLWAQL 117 Query: 124 SSVEIECH-DILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHP 182 H DI+ + +L +ADL + MP + L R + S HP Sbjct: 118 RKTSPGVHIDIVPLSAETPRMLETGEADLALGFMPQLEAGFYQQSLFRQRYVCVASTDHP 177 Query: 183 RITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTD 242 RI D T Q EE + S G + EI + + R I+ R + L I + TD Sbjct: 178 RIHDELTLAQFETEEHAVVTSSGTGHLILDREIARQGITRHIALRVPNYLGIAFVVEQTD 237 Query: 243 LLGIVPYEL 251 +L +P L Sbjct: 238 MLVTIPERL 246 >UniRef50_B5ET44 Transcriptional regulator n=1 Tax=Vibrio fischeri MJ11 RepID=B5ET44_VIBFM Length = 301 Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 73/287 (25%), Positives = 136/287 (47%), Gaps = 14/287 (4%) Query: 8 KKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPT 67 K FD+NLL +F + Q S +KA+E L +T S+VS +++RL+ + LF RSG+GI T Sbjct: 5 KDFDMNLLRVFVSVCQTGSFTKASEELELTQSSVSNAIRRLKKALGNELFTRSGRGIEMT 64 Query: 68 TTGLNLHHHLEKNLRGLEQTINIVNKSE---LKKNFIIYG-----PQLISCSNNSMLIRC 119 G + +E ++ L TI ++ E +NFI+Y P+L + +R Sbjct: 65 AFGKHFFEAVEPSVMSLVNTIGRDDRFEPLTSSRNFIVYALESVLPRL------QIRLRE 118 Query: 120 LRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSN 179 L + S++ + ++ + E + L+ K DLV+ M S+ + + I Sbjct: 119 LLKGSNITVTLKELPSNEEETFDALMREKVDLVLDVMKPHQSSLKSVIVSEDAACCIARI 178 Query: 180 RHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIA 239 HPRI T+EQ E+ L + ++ E R + +S+L ++ +A Sbjct: 179 GHPRIFGEMTHEQYFNEDHAFLNMRRVKQTIMEYLAKEELPKRTMGSEHTSMLGMMACVA 238 Query: 240 VTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNN 286 +D +G+ L + Y++ L+ + L + +++ ++ S +N Sbjct: 239 QSDFVGVNSVRLVSQYKEQFKLQMLPLPFSTRTTSIHMIWSVKSQSN 285 >UniRef50_B1KAV0 Transcriptional regulator, LysR family n=5 Tax=Burkholderia cepacia complex RepID=B1KAV0_BURCC Length = 345 Score = 90.1 bits (222), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 72/288 (25%), Positives = 136/288 (47%), Gaps = 23/288 (7%) Query: 6 DLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIA 65 D+++ DLNLL +F+ + + +++A S+ ++ A+S +L +LR F DPLF+R+G+G+ Sbjct: 2 DIRQVDLNLLKVFDALLKKRHVTQAGVSIGLSQPAMSYALSKLRELFEDPLFVRTGRGME 61 Query: 66 PTTTGLNLHHHLEKNLRGLEQT----INIVNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 PT L + + L L QT + +E +NF+ + S+ ++ R Sbjct: 62 PTPRAQALGEPVAR-LLDLVQTEILPMPEFRPAESSRNFV------LCMSDIGEMVFLPR 114 Query: 122 QDS-----SVEIECHDILMSAENAEELLVHRKADLVITQMPVI-SRSVICMPLHTIRNTL 175 +S + + + +S EE L DL I P + S S+ L+ R++ Sbjct: 115 LESFLDKAAPHVSIKTVALSMPELEEGLASGDVDLAIGYFPGLNSESLKRKALY--RHSY 172 Query: 176 ICSNR--HPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNR-KISFRGSSLL 232 +C R HP I D + +Q A ++ D+ ER R + F + Sbjct: 173 VCIARDDHPEIGDTLSLDQYRAAAHV-MVHPEGREQDVLARTHERLGIRVNVRFSTPRFI 231 Query: 233 TIINSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYN 280 + +A +D++ VP + + +F+N+K + L P P+ +LY+ ++ Sbjct: 232 GVPFVVAGSDMIAAVPQAVGRRFAEFVNVKLLPLPFPAPTYELYLHWH 279 >UniRef50_B4X4B4 LysR substrate binding domain protein n=1 Tax=Alcanivorax sp. DG881 RepID=B4X4B4_9GAMM Length = 304 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 73/289 (25%), Positives = 134/289 (46%), Gaps = 24/289 (8%) Query: 6 DLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIA 65 +L+ DLNLL +F+ I + +S+AAESL ++ A+S +LQRLR F D LF+R+ G+ Sbjct: 4 NLRSIDLNLLPVFDAIMEAGQLSRAAESLGMSQPAISAALQRLRHTFGDTLFVRTHHGMT 63 Query: 66 PTTTGLNLHHHLEKNLRGLEQTINIVNK---SELKKNFIIYGPQLISCSNNSMLIRCLRQ 122 PT LH L L L T+N N+ + +++F I L+ LRQ Sbjct: 64 PTPRARELHDQLGPQLVALRDTLNPENRFDPATSQRHFRILSVDYFEMVVLGPLLATLRQ 123 Query: 123 DSS-VEIECHDILMSAENAEELLVHRKADLVITQMPV----ISRSVICMPLHTIRNTLIC 177 + V +E I+ + ++ + L +ADL + + R+V+ + +I Sbjct: 124 QAPHVVLE---IIAADDDMPDELHKGRADLSVDAFVADDDRLQRNVLL----EEKLVVIA 176 Query: 178 SNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERF----MNRKISFRGSSLLT 233 HP I + +Q + E L +++ Q+ +D+ R+ R + + Sbjct: 177 RRSHPHIKGHCDKQQFLDAEHVVLPNRNR-----QLPLDQILNAPGWQRRTGARVTQFAS 231 Query: 234 IINSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKS 282 ++ +DL+ VP L Y + + L+ + LP + +Y+ ++ + Sbjct: 232 MLAVCGGSDLIATVPDRLAQQYAETMQLQVLPFPVALPPVPIYMIWSPT 280 >UniRef50_Q486J0 Transcriptional regulator, LysR family n=4 Tax=Gammaproteobacteria RepID=Q486J0_COLP3 Length = 306 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 80/296 (27%), Positives = 146/296 (49%), Gaps = 26/296 (8%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 +K D +L+ F I + S +KAA+ L I+ SAVSQ + RL+A F D LFIR +G+ P Sbjct: 1 MKHSDYSLIPTFVAIVEEKSYTKAAKRLGISQSAVSQGVTRLQAVFKDTLFIRGSRGVEP 60 Query: 67 TTTGLNLHHHLE---KNLRGLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQD 123 T L+++ L +N+ + + + +K F+I + + L + Q Sbjct: 61 TQFSLDIYPTLASSVENIAFMMPEYKKFSAVKCEKQFVISSLSVFGFTILPPLSALMSQH 120 Query: 124 ---SSVEIECHDILMSAENAEELLVHRKADLVI----TQMPVISRSVICMPLHTIRNTL- 175 +SV+IE ++ + +L + DLVI Q P + VI + +TL Sbjct: 121 APLASVKIEP----LNNHDFTNMLRSQHFDLVIDAHSNQYPQLRSKVI------MEDTLC 170 Query: 176 -ICSNRHPRITDNS-TYEQIMAEE---FTQLISKSAGVDDIQMEIDERFMNRKISFRGSS 230 +C HPR++ +S + ++ +AE+ +QL K + ++ DE RKI+++ +S Sbjct: 171 VMCRIDHPRLSGDSISIDEFLAEKHVTHSQLDQKGGYLSGKGLKEDEILNQRKIAWQAAS 230 Query: 231 LLTIINSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNN 286 ++ ++ I D + ++P L + YR LK++ L IK+ + ++ S N+ Sbjct: 231 IMEMLPVIECCDYIALLPQRLVDKYRHIYQLKQLHSNFLLDPIKVAMYWHSSRTND 286 >UniRef50_B7WQP0 Transcriptional regulator, LysR family n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WQP0_COMTE Length = 295 Score = 89.4 bits (220), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 68/275 (24%), Positives = 124/275 (45%), Gaps = 5/275 (1%) Query: 10 FDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTT 69 D+ LL +F+ IY+ S+S+A E+L + ++VS +L RLR FND LF+R+ +G+ PT Sbjct: 1 MDMKLLSVFDEIYKTRSVSRAGENLGLAQTSVSLALGRLRRAFNDQLFVRTSEGMLPTPR 60 Query: 70 GLNLHHHLEKNLRGLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSVEIE 129 L L + L L+ + + + + + S+ L + + ++ + Sbjct: 61 AAALVPQLRQALELLQSATRQQAEFDPASSSRAFRLAMTDISHLEFLPALMNKLGNIAPK 120 Query: 130 CH-DILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNR--HPRITD 186 ++L + LL ADL I MP + L R+ C R HPRI D Sbjct: 121 VRVEVLRITADTARLLEAGDADLAIGYMPELDAGFYQQKL--FRDGFACVVRRTHPRIDD 178 Query: 187 NSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLGI 246 N T + E + + G + ++ E+ + R ++ +L + N +A TDL+ Sbjct: 179 NLTMTRFKTERHVIITAPGTGNEIVEQELKRQGAQRNVALSLPTLPGVGNLLAHTDLIAT 238 Query: 247 VPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNK 281 VP+ + + +K I + LP + +++ Sbjct: 239 VPHRIAQTLVKIAQVKAIASPYRLPEFAIKQHWHE 273 >UniRef50_Q8YZV2 Transcriptional regulator n=2 Tax=Nostocaceae RepID=Q8YZV2_ANASP Length = 305 Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 76/274 (27%), Positives = 123/274 (44%), Gaps = 13/274 (4%) Query: 3 NLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGK 62 L DL DLNLLV FE +++ S++ AA+ LY+ A+S +L RLR F D LFIR G+ Sbjct: 2 GLIDLSSIDLNLLVTFEVLFEERSVTAAAQRLYLGQPAMSAALARLRILFQDELFIRIGR 61 Query: 63 GIAPTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRC 119 + PT L + + L+ + QT+ + + K F I S L+ Sbjct: 62 EMQPTAKALEISPGISVALQQIRQTLESSQTFDPTTSKHTFAIGSSDYTSYVVLPKLLEV 121 Query: 120 LRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSN 179 RQ + I+ I ++ +LL R+ + + R MPL +C Sbjct: 122 CRQVAP-SIDFRLIGFEKDSVGDLLEQREIHVALGLFQNPPRQTRQMPLFEEHFVGLCRR 180 Query: 180 RHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERF----MNRKISFRGSSLLTII 235 HP +T S + A L + DDI EID+ + R++ LL + Sbjct: 181 GHPVVTQESMTPETFARLPQALFTLRR--DDIG-EIDKVLAQYNLQRRVVLTTPHLLILP 237 Query: 236 NSIAVTDLLGIVPYELYN--SYRDFLNLKEIKLE 267 I+ +DL+ ++P L +Y+D L + E+ ++ Sbjct: 238 TVISSSDLVTVIPSRLLTPFAYKDTLEIFELPVK 271 >UniRef50_Q32IV1 Putative transcriptional regulator LYSR-type n=1 Tax=Shigella dysenteriae Sd197 RepID=Q32IV1_SHIDS Length = 311 Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 78/317 (24%), Positives = 129/317 (40%), Gaps = 57/317 (17%) Query: 34 LYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTTGLNLHHHLEKNLRGLEQTINIVNK 93 L +TPSA+SQS+Q+LR F DPLFIR G+G+ PT ++LH ++ + L + ++I Sbjct: 2 LNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEYISQGLESILGALDIAGS 61 Query: 94 SELKKNFIIYGPQLISCSNNSMLIRCLRQDSSVEIECHDILMSAENAEELLVHRKADLVI 153 + ++ I + ++ R ++ + + + AEN L + DL+I Sbjct: 62 YDKQRTITIATTPSVGALVLPVIYRAIKTHYPQLLLRNPPISDAENQ---LSQFQTDLII 118 Query: 154 TQMPVISRSVICMPLHTIRNTLICSNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQM 213 M +R+V L T LIC +P ++ E I L+ + ++ Sbjct: 119 DNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLEDDRETIDNAAHVLLLPEGQNFSGLRQ 178 Query: 214 EIDERFMNRKISFRGSS------------------------------------------- 230 I E F +R+ISF + Sbjct: 179 RIQEMFPDRQISFTSFTSYTSYNSYNSYNSYNSYNSYNSYNSYNSYNSYNSYNSYNSYNS 238 Query: 231 --LLTIINSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPS-----IKLYISYNKSS 283 +LTI +A +D+L I+P YN + L+++ P PS I I YNK S Sbjct: 239 YNILTIAALVANSDMLAIIPSRFYNLFSRCWPLEKL----PFPSLNEEQIDFSIHYNKFS 294 Query: 284 LNNLVFSRFIDRLNESF 300 L + ID + +F Sbjct: 295 LRAPILHGVIDVIRNAF 311 >UniRef50_Q15UP0 Transcriptional regulator, LysR family n=4 Tax=Alteromonadales RepID=Q15UP0_PSEA6 Length = 305 Score = 87.8 bits (216), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 69/256 (26%), Positives = 110/256 (42%), Gaps = 9/256 (3%) Query: 6 DLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIA 65 +L + DLNL +F+ IY S++KAA+ L IT AVS SL RLR NDPLF+R+G + Sbjct: 2 NLNRIDLNLFAVFDAIYTAGSLTKAADVLCITQPAVSNSLARLREMLNDPLFVRTGHSMT 61 Query: 66 PTTTGLNLHHHLEKNLRGLEQTINIVN-----KSELKKNFIIYGPQLISCSNNSMLIRCL 120 PT N+ + L L +++ + +E+ NF L+ S L L Sbjct: 62 PTPAAQNIIGPAREALGLLRKSVQESHTFDPATAEISYNFA--ARDLLEASIMPRLTAQL 119 Query: 121 RQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVIC-MPLHTIRNTLICSN 179 Q+ + I + +S N + D +C + R +I Sbjct: 120 -QNVAPNITLTNYDISRSNIVSAMASGSLDFYADASSAFVDPHLCKQKIAEDRFVVIARR 178 Query: 180 RHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIA 239 HP ++ + + + + G I + +D+ + R++ RG LT+ I Sbjct: 179 NHPALSQGLNLDTFLQLGHINISQRRTGAGPIDVALDKLNLKRRVVMRGQHFLTVPAVIV 238 Query: 240 VTDLLGIVPYELYNSY 255 TDL+ VPY L Y Sbjct: 239 KTDLIACVPYHLAKHY 254 >UniRef50_A1WRT3 Transcriptional regulator, LysR family n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WRT3_VEREI Length = 315 Score = 87.8 bits (216), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 74/278 (26%), Positives = 128/278 (46%), Gaps = 15/278 (5%) Query: 6 DLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIA 65 DL +F+LNLL F+ IY+H S+S AA+ L +T AV+ +L +LR F++PLF+R+ G+ Sbjct: 2 DLSEFNLNLLTFFDAIYRHRSVSAAAQELDLTQPAVTAALNKLRVHFDNPLFVRTSNGMH 61 Query: 66 PTTTGLNLH---HHLEKNLRGLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQ 122 PT L H+ ++R L++ +S K F IY + +++ L Q Sbjct: 62 PTPWADALAPKIAHVLDSVRRLDEPTPFQPQSA-KNQFKIYVNDIGMMLALPKIVQLLNQ 120 Query: 123 DSSVEIECHDILMSAENAEELLVHRKADLVI---TQMPVISRSVICMPLHTIRNTLICSN 179 D+ + I + + L + DL I +P +R H + +C+ Sbjct: 121 DAP-HTQLTVIDLRQDEVVNALDVGEIDLAIGYFVGVPNWARQQ-----HLRDTSYVCAM 174 Query: 180 R--HPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINS 237 R HP I D T Q + + + + + +R +R I+ R L I Sbjct: 175 RKDHPSIGDTMTLTQYLNARHAMYWTHGSTYGRLDEALAKRGFSRDIAVRIPRLGAIPFL 234 Query: 238 IAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKL 275 A +D + +P +L +RD + +K + + LPS ++ Sbjct: 235 AAFSDFVVTIPEDLGLLFRDLIPIKLVPVPISLPSFQV 272 >UniRef50_A6CX36 Transcriptional regulator n=1 Tax=Vibrio shilonii AK1 RepID=A6CX36_9VIBR Length = 308 Score = 87.8 bits (216), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 74/282 (26%), Positives = 131/282 (46%), Gaps = 11/282 (3%) Query: 9 KFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTT 68 K DLNL F +Y+H SIS+AAE L +TP++VSQS+++L + N LF+R G+GI PT Sbjct: 11 KIDLNLFRTFATVYKHDSISRAAEELNVTPASVSQSIKKLSIELNTSLFMRRGRGITPT- 69 Query: 69 TGLNLHHHLEKNLRGLEQTINIVNK------SELKKNFIIYGPQLISCSNNSMLIRCLRQ 122 L HH +E+ L + I N + ++ P+ I + Sbjct: 70 --LQAHHLIERIAPLLHEFDVITNDCLYGVHQSTPRKVVVQAPEPIIFEHIKSTELANHT 127 Query: 123 DSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHP 182 ++ +E DIL S ++ E L + AD +I + ++ L +I S HP Sbjct: 128 ETRFRLEWLDILYSNSDSYETLKFKHADAIIDIFQLAEPNICNDLLFEDEIVVIASKNHP 187 Query: 183 RITDNSTYEQIMAEEFTQLISKSAGVDDI-QMEIDERFMNRKISFRGSSLLTIINSIAVT 241 R+ + EQ AEE +++ G + +M + R+I +SL ++++ + + Sbjct: 188 RVGSTISPEQ-FAEESHIILNYQFGESSLFEMLYNSPPPKRRILSTQTSLTSMLSLTSES 246 Query: 242 DLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSS 283 + L + + + L +K + P+ +K ++ Y S Sbjct: 247 EALCLCTRRFAEQHANRLPIKILPFPGPVEPVKFWLIYPAQS 288 >UniRef50_A0NZC9 LysR family regulatory protein n=3 Tax=Rhodobacteraceae RepID=A0NZC9_9RHOB Length = 305 Score = 87.8 bits (216), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 73/284 (25%), Positives = 132/284 (46%), Gaps = 17/284 (5%) Query: 4 LYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKG 63 + +L+ FDLNLLVIF I Q SIS AA + ++PSAVS +L RLR ND LF R+ +G Sbjct: 1 MVNLRSFDLNLLVIFRAIMQRGSISGAANEIGLSPSAVSHALARLRVMLNDELFFRTAEG 60 Query: 64 IAPTTTGLNLHHHLEKNLRGLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCLR-- 121 ++PT L +E+ L + I++ ++ + ++ Q+ +L R + Sbjct: 61 VSPTERARELSVDIERGLSFISTAISLQHQFVPAETNRVFTMQVADYVAGFLLPRLAKRL 120 Query: 122 --QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSN 179 + + I+ +S E+ V + D+ + P + + + + ++ Sbjct: 121 QSEAPGITIDILPFSISPES-----VWDRVDMQVRLTPGRLQPEMVRSQRLLADEIVVLM 175 Query: 180 R--HPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINS 237 R HPR+ + T E +L + G I+ + R + R ++ +S I + Sbjct: 176 RRGHPRVDEPMTAELYAELPHVKLSQSATGTTVIEDALAARGLKRHMAMTVASWFEIPDI 235 Query: 238 IAVTDLLGIVPYELYNSYRDFLNLKEIKL-EHPLPSIKLYISYN 280 +A +DL+ I P L + L+ + KL PLP ++ S++ Sbjct: 236 VARSDLIAIAPQRLLS-----LDPRLGKLHSAPLPLDEVVFSFD 274 >UniRef50_Q0SCY7 Transcriptional regulator, LysR family protein n=3 Tax=Actinomycetales RepID=Q0SCY7_RHOSR Length = 331 Score = 87.4 bits (215), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 77/298 (25%), Positives = 136/298 (45%), Gaps = 15/298 (5%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 + DLNL+ F +Y+ S+++ AE L+IT +VS SL+RLR QFND LFIRS G+AP Sbjct: 28 MADVDLNLIRTFVLLYETRSVTRTAELLFITQPSVSHSLRRLRRQFNDDLFIRSSDGLAP 87 Query: 67 TTTGLNLHHHLEKNLRGLEQTINIVNKSELK---KNFIIYGPQLISCSNNSMLIRCLRQD 123 T +++ L + L +++T++ V + + + F I L S ++ L Sbjct: 88 TVLAASMYPQLHQALEVIDETVSGVGHFDAETSDRTFRICATDLGEISLLPGVLAALETR 147 Query: 124 S---SVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNR 180 + +V++ D +AE L +AD VI + + + PL +C+ Sbjct: 148 APGCAVQVTPLDFASAAEE----LRQGRADAVICTPRIDAPDLRRDPLFREGYVGLCALG 203 Query: 181 HPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAV 240 HPRI + +AE ++ +AG D + R I+ R + +A Sbjct: 204 HPRIGVEPGLDDFLAERHI-VVDAAAGHVDADQALARMGRRRDIAVRVPHFAVLPELVAQ 262 Query: 241 TDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 T L +VP + + ++ L +P++++ + + +L S +D L E Sbjct: 263 TRHLAVVPSRVAELFTRSSPVRTFALPVEIPNVEVSLFTVRRALP----SPGVDWLRE 316 >UniRef50_Q5LKP3 Transcriptional regulator, LysR family n=1 Tax=Ruegeria pomeroyi RepID=Q5LKP3_SILPO Length = 324 Score = 87.4 bits (215), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 72/279 (25%), Positives = 122/279 (43%), Gaps = 5/279 (1%) Query: 6 DLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIA 65 DL+K DLNLLV FE IY +IS AA+ L ++ +S +L RLR DPLFIRSG+G+A Sbjct: 2 DLRKLDLNLLVTFEAIYTAGNISHAAKRLNVSQPTISNALARLRDTVGDPLFIRSGRGVA 61 Query: 66 PTTTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCLRQ 122 PT + + L+ ++ + S ++NF I ++ L+R ++ Sbjct: 62 PTPRATGMIGPVRDALQMIQSGFGDDERFDPSTTRRNFRIVVLDMLEPILMPPLVRAVQD 121 Query: 123 DSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHP 182 SV +E + M AE L DL +T + C + + ++ HP Sbjct: 122 YRSVTLEMLPV-MDFPIAEG-LNDGSLDLALTTFDPQHGDIECEQVGAAKIVIVARKGHP 179 Query: 183 RITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTD 242 RI T + LI K + + + ++R I + + + + +A +D Sbjct: 180 RIKGEMTPALVSEIGHVALIPKIRALSRVDEVLRYAKIDRHIVYMVTRFWSFPHILANSD 239 Query: 243 LLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNK 281 L+ ++P + F L + P +Y+ + K Sbjct: 240 LIAMMPGDFAAHAALFYPLDIFPVPFEFPEQHIYMIWKK 278 >UniRef50_B7VH72 Transcriptional regulator n=4 Tax=Vibrionales RepID=B7VH72_VIBSL Length = 311 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 69/298 (23%), Positives = 129/298 (43%), Gaps = 23/298 (7%) Query: 11 DLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTTG 70 + NLL +F + + S+SKAA+ L S +S +L RL+ + LF+R G+G+ PT+ Sbjct: 7 NFNLLAVFSAVMEQGSLSKAADQLSTNQSTISTALARLKKEIGQELFVRKGRGVTPTSYA 66 Query: 71 LNLHHHLEKNLRGLE---QTINIVNKSELKKNFIIYGPQ---------LISCSNNSMLIR 118 +L+ ++ + L Q++ ++ ++ F+I P+ + N ++ + Sbjct: 67 QSLYEQIKTPIHELNDVFQSMANFDEQSSERKFVISSPEHLQWILLNSFAALPNQNLSLE 126 Query: 119 CLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICS 178 Q S E D+L +A D+V+ + P S++ L+ ++C Sbjct: 127 VFDQPDSDERIYEDLLTQEFDA-------MIDIVVPEHP----SIVSETLYEGEFVIVCR 175 Query: 179 NRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSI 238 HPRI + Q M E+ L V + RKI F G SL + I Sbjct: 176 EDHPRIQGEISEAQFMNEKHAVLDRTRRKVRSLNHYTSLDLSKRKIVFHGRSLFSNILLC 235 Query: 239 AVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRL 296 + +D + +VP + +++ L L+ K I Y+ + K N+ F +++ Sbjct: 236 SQSDYITVVPLSMAVQFQERLGLQLFKPPFEYQPISHYLIWLKKQNNDPAHKWFREQV 293 >UniRef50_A8H6N4 Transcriptional regulator, LysR family n=3 Tax=Shewanella RepID=A8H6N4_SHEPA Length = 305 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 71/283 (25%), Positives = 130/283 (45%), Gaps = 18/283 (6%) Query: 8 KKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPT 67 K FDLNL IF +Y+ S S+AAE L +T S+VS ++ RL+ + LFIR G+G+ PT Sbjct: 5 KSFDLNLFRIFTAVYRTSSFSRAAEELDLTQSSVSNAITRLKLAVGEELFIRVGRGVKPT 64 Query: 68 TTGLNLHHHLEKNLRGLEQ---TINIVNKSELKKNFIIYGPQLISCSNNSML-----IRC 119 + +NL+ L + +EQ + + + ++ F +Y S +++L + Sbjct: 65 ASAMNLYQQLASPVSEIEQVASSFELFDAKRSERTFYVY------ASESAILLLQGIVEQ 118 Query: 120 LRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSN 179 ++ S+ + + + E + L K DL + S S + +++ L+C Sbjct: 119 FLEELSINLVFREPPLIEEELQMDLQLEKVDLALDIWLPESSSFKSQKV--MQDKLVCVA 176 Query: 180 R--HPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINS 237 R HPRI+ T EQ E+ + + + + RK+ SS+L+++ Sbjct: 177 RKGHPRISGAITQEQYFNEKHIIFKMRRDNLSVADLLTKQVLPARKMHSEQSSILSMMAL 236 Query: 238 IAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYN 280 + +D L IV + Y L+ +L I+ Y+ ++ Sbjct: 237 ASKSDALAIVSKSYTDEYAQLFGLQVFELPFAAEPIEYYMVWS 279 >UniRef50_Q473Q1 Transcriptional regulator, LysR family n=9 Tax=Burkholderiaceae RepID=Q473Q1_RALEJ Length = 315 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 68/285 (23%), Positives = 124/285 (43%), Gaps = 8/285 (2%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 L + DLNL V+F+ IY SI+ AA L +T AVS +L RLR F+DPLF R G+G+AP Sbjct: 6 LSRIDLNLFVVFDAIYSEGSITAAARQLNLTQPAVSHALGRLRGLFDDPLFERRGQGMAP 65 Query: 67 TTTGLNLHHHLEKNLRGLEQTINIV---NKSELKKNFIIYGPQLISCSNNSMLIRCLRQD 123 T +L + L+ +T+ + + + F I + +++L + + Sbjct: 66 TPLARSLASEVRSALQSFARTLQDTPHFDPTNTVRRFTI---GMRDALESTLLPPLMARV 122 Query: 124 SSV--EIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 +SV ++E I E L+ D I + +S ++ ++ H Sbjct: 123 TSVAPQVEIAAIRFDRREMESELLAGTIDAAIDILLPVSPAIHHAQFMADPMIVLARRDH 182 Query: 182 PRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVT 241 P + T E+ +A E + S+ G + + R++ R ++ T Sbjct: 183 PLVKKELTLERYLAAEHVHVSSRRRGAGLEDQALHRMGLTRRVRLRCQHYAAACRVVSCT 242 Query: 242 DLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNN 286 DLL +P + + + L +PS++L++ ++ N+ Sbjct: 243 DLLATLPLRYARIANEPYANRILSLPFKVPSLELHLYWHAGGEND 287 >UniRef50_A7K354 LysR substrate binding domain protein n=17 Tax=Gammaproteobacteria RepID=A7K354_VIBSE Length = 314 Score = 85.9 bits (211), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 73/258 (28%), Positives = 127/258 (49%), Gaps = 24/258 (9%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 + DLNLLV F +Y++ S+S AAE Y++ SA+S SL RLR F+DPLF R G + P Sbjct: 15 WRNIDLNLLVTFSYLYRYRSVSVAAEKSYVSQSAMSHSLSRLRLLFDDPLFERKGHKMEP 74 Query: 67 TTTGLNLHHHLEKNLRGLEQTI--NIVNKSELK-KNFIIYGPQLISCSNNSMLIRCLR-- 121 T HH+ + L +I +++ KS + +N+ G I ++ + I R Sbjct: 75 TEHA----HHIAPTVHHLLDSIAKDLLTKSAFQPENYA--GICRIGLTDYAEFIFAPRLY 128 Query: 122 ---QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICS 178 + + E + I ++ N L H K D++I MPV+ + + L+T ++ +C Sbjct: 129 DEIRQRAPEAQISFINVNRSNYVALTEHEKLDVIIGSMPVLDDNFESLYLYTEKHVCMCD 188 Query: 179 NRHPRITDNSTYEQIMAEEFT----QLISKSAGVD-DIQMEIDERFMNRKISFRGSSLLT 233 ++ T Q+ E F L+S + + ++ E ++RK++ + LT Sbjct: 189 K---QVLKGET--QLSLEAFANIEQALVSPDGSLKTQVDQKLAEHGLSRKVTVASRNFLT 243 Query: 234 IINSIAVTDLLGIVPYEL 251 I + + DL+ IVP ++ Sbjct: 244 IRHLLKKRDLIAIVPEKM 261 >UniRef50_A6D744 Putative transcriptional regulator n=1 Tax=Vibrio shilonii AK1 RepID=A6D744_9VIBR Length = 311 Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 71/254 (27%), Positives = 119/254 (46%), Gaps = 20/254 (7%) Query: 2 ANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSG 61 ANL+ +K DLNLL F + Q + K AE L++T A+SQ+LQ+LR +D LF++ Sbjct: 5 ANLF--QKLDLNLLKTFRVLLQERNARKTAERLFVTQPAISQALQKLRFHLDDELFVKVQ 62 Query: 62 KGIAPTTTGLNLHHHLEKNLRGLEQTINIV---NKSELKKNF-IIYGPQLISCSNNSMLI 117 G+ PT L + + L GLE ++ + + SEL+ I P ++SC S+ Sbjct: 63 GGLEPTPFALQVEEKIAPYLDGLEASLEQLSDFSPSELEGTIKIALAPIVLSCLAGSLFT 122 Query: 118 RCLRQDSSVEIECHDILMSAENAEELLVHRKADLVIT---QMPVISRSVICMPLHTIRNT 174 +Q + +E + + + E+L R ++ I + IS+ + L + Sbjct: 123 ELRKQAPKLNLEL--VSWTQQTPEQL---RSGEVFIGIHYDLDSISKEIARTKLADLEGQ 177 Query: 175 LICSNRHPRITDNSTYEQIMAEEFTQLISKSAGVDD---IQMEIDERF-MNRKISFRGSS 230 + HP + T E LI S G +D +I E+ K++FR Sbjct: 178 VYVRQDHPLKGEVITAHDAAQFEIASLI--SPGWNDNFSFAAQILEQLGYEPKVAFRSEV 235 Query: 231 LLTIINSIAVTDLL 244 L+ II+ ++ TD+L Sbjct: 236 LMAIIDVVSATDIL 249 >UniRef50_D0RY94 Transcriptional regulator n=4 Tax=Acinetobacter RepID=D0RY94_ACICA Length = 311 Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 78/300 (26%), Positives = 138/300 (46%), Gaps = 16/300 (5%) Query: 3 NLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGK 62 N+ L + DLNL +F IY+ ++++A+E L+++ AVS +L RLR FNDPLFIR G Sbjct: 7 NVASLARIDLNLFRVFVTIYKEKNLTRASEQLFLSQPAVSHALARLRDHFNDPLFIRDGH 66 Query: 63 GIAPTTTGLNLHHHLEKNLRGLEQTI----NIVNKSELKKNFIIYGPQLISCSNNSMLIR 118 G+ P+ L +E++L+ + Q I + V +LK I + S++ Sbjct: 67 GVVPSPLAKRLWPKIEQSLQLMHQAIQSTYDFVPARDLKHLTIAMNDEYEGIFLPSIIQH 126 Query: 119 CLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICS 178 + + ++++ + + + +N L K D I + S+ + +I Sbjct: 127 LTQFNPNLQL--NSVRIDRKNLRHELSTGKIDFAIDVQHSVEDSIGYECCTKDQFVVISR 184 Query: 179 NRHPRITDNS-TYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINS 237 +HP ++ T E + + + S+ G + ++ + R ISFR T I Sbjct: 185 KQHPLLSSTDLTKEIYLDAKHITVSSRPTGRVFEDFFLSKQGIKRTISFRCQQYETAIRL 244 Query: 238 IAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLP------SIKLYISYNKSSLNNLVFSR 291 I TD L +P ++D N +IK+ HPLP + LY KS + +V+ + Sbjct: 245 ITQTDHLLTIPQCQIAYFKD--NYPQIKV-HPLPIDIAGYQMNLYWDQQKSHEHQIVWCK 301 >UniRef50_A8H681 Transcriptional regulator, LysR family n=2 Tax=Gammaproteobacteria RepID=A8H681_SHEPA Length = 300 Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 81/286 (28%), Positives = 136/286 (47%), Gaps = 22/286 (7%) Query: 9 KFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTT 68 KFDLNLL +F + + S K +E+L I+P AVS +++RL+ LF+R G I PT Sbjct: 5 KFDLNLLKVFSKVMETGSYVKTSEALGISPPAVSIAMKRLQKSLEKELFVRGGGQIQPTA 64 Query: 69 TGLNLHHHLEKNLRGLEQTINIVNKSEL---KKNFIIYGPQ-----LISC---SNNSMLI 117 L+ ++ L +E I+ + + K +F + GP+ L+S N+ L Sbjct: 65 AAKALYQNVRFELLSIETVISAFGQFDPHVSKAHFSLMGPEEYNAKLLSAFAGEQNNGLT 124 Query: 118 RCLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLIC 177 L Q +S + E A L R DLVI + + S+ L R LI Sbjct: 125 YSLMQQASTD----------EEAIASLRTRMTDLVIDSVVLADSSIESELLFEDRIVLIA 174 Query: 178 SNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERF-MNRKISFRGSSLLTIIN 236 + + I +N T+EQ + L + +G ++M ++++ + R IS SS++ I Sbjct: 175 AKSNSTIDENLTFEQYQELPQSVLSLRRSGKLALEMFLEDKLEVRRNISHEASSIMANIL 234 Query: 237 SIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKS 282 ++ T L VP L Y++ L+LK I+ L + + + ++KS Sbjct: 235 IVSQTMLFCHVPLRLAIHYQEQLSLKIIEPPISLKPVPVIMQWHKS 280 >UniRef50_B8E7T8 Transcriptional regulator, LysR family n=7 Tax=Shewanella RepID=B8E7T8_SHEB2 Length = 313 Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 71/294 (24%), Positives = 134/294 (45%), Gaps = 28/294 (9%) Query: 8 KKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPT 67 K DLNLL +F +Y+ S ++AAE L +T S+VS ++ R R + LF R G+GI PT Sbjct: 5 KPLDLNLLRVFMVVYRTRSFTQAAEELDLTQSSVSNAISRFRVWVGESLFNRVGRGIEPT 64 Query: 68 TTGLNLHHHLEKNLRGLEQTINIVNKSELK---KNFIIYGPQLISCSNNSML------IR 118 ++ E+ + +E + + K + F +Y +N S++ ++ Sbjct: 65 AVAREMYRKFEQPMADIETVLLGFEHFDPKCSQRRFYVY-------ANESVIEALQTGVQ 117 Query: 119 CLRQDSSVEIECHD-ILMSAENAEELLVHRKA---DLVITQMPVISRSVICMPLHTIRNT 174 L QD+ +E+ + A+ ++L+ R A D+ Q ++S ++ T Sbjct: 118 ALLQDADIEVIFRESPPQEADLYRDILLERVAVAIDIKPAQQSLLSSKLL------FTET 171 Query: 175 LIC--SNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLL 232 L+C S +HPRI T+ Q E+ L + + + + RK+ SSLL Sbjct: 172 LVCIVSRQHPRIQGAITHGQYFEEKHVFLNMRRFNLTAGDLFTEGVLPRRKMYSEQSSLL 231 Query: 233 TIINSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNN 286 ++ ++ ++ +GI P + Y + ++ + + I LY+ ++ N Sbjct: 232 SMFATVGKSEAIGIAPLRYASQYAELFGIQILPMPLKTRPIDLYMVWSSKYTQN 285 >UniRef50_Q12M05 Transcriptional regulator n=3 Tax=Gammaproteobacteria RepID=Q12M05_SHEDO Length = 309 Score = 84.7 bits (208), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 74/285 (25%), Positives = 130/285 (45%), Gaps = 22/285 (7%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 + K DLNLLVIF+ I + SIS AAE L +T +VS ++ R+R + DPLFI+ G+GI P Sbjct: 5 MSKLDLNLLVIFDAIMKEQSISAAAEQLAMTQPSVSNAVARMRHNWKDPLFIKQGRGIKP 64 Query: 67 TTTGLNLHHHLEKNLRGLEQTIN--IVNKSELKKNFIIYGPQLISCSNNSMLIRCLR--- 121 + L L + L + ++ N + ++ F I I+ + + LR Sbjct: 65 SPFALALWQQVASPLEQIRSAVSSKTFNAAHSERTFRIA----ITDGTSGLFWPALRRHL 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLIC--SN 179 + + +I H + + E LLV+ + DLV+ +R + H N +C + Sbjct: 121 ERHAPKINLHAVPYKLD-GEALLVNAEVDLVLDYYE--NRHPQILSQHLFDNQFVCVMAK 177 Query: 180 RHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFM----NRKISFRGSSLLTII 235 H T + A E L+S S D +D + +R+I+ +S + Sbjct: 178 AHALSEKTLTLDDFAAAEHL-LVSLSG---DASGTVDRKLAQLGHSRRIAMTVNSFASAK 233 Query: 236 NSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYN 280 I + L+ +PY + S++ L L +PS+ + ++++ Sbjct: 234 TLIEESRLISTLPYSIIASWQSLDKLTVKTLPFTVPSVPISMAWH 278 >UniRef50_D0XIC6 Putative uncharacterized protein n=1 Tax=Vibrio harveyi 1DA3 RepID=D0XIC6_VIBHA Length = 304 Score = 84.0 bits (206), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 75/275 (27%), Positives = 121/275 (44%), Gaps = 18/275 (6%) Query: 8 KKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPT 67 K DLNL+ F + + S +KAAE L +T AVS S++RL N LF++SG+ I T Sbjct: 18 KPIDLNLINTFLVVTESQSYTKAAEQLGVTQPAVSASIRRLEQASNKKLFVKSGRSIELT 77 Query: 68 TTGLNLHHHLEKNLRGLEQTINIVNKSELKKNFIIYGPQL-ISCSNNSMLIRCLRQDSSV 126 T L L K L ++ N + K +L K + P L +S +N + Sbjct: 78 HTARELLPQLRKALSIID---NAMTKPQLFKAYCCDLPLLGLSPIDNVIF---------- 124 Query: 127 EIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRITD 186 H+ A + L HRKAD++I + S+I LH +I HPR+ Sbjct: 125 ----HESTQDAGELCDFLYHRKADIIIGCIGNKPTSIIVEDLHQEPFVIIGRADHPRLGK 180 Query: 187 NSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLGI 246 + E+ L S + + + ++ +I SS L ++ ++A D LG+ Sbjct: 181 RLDIDAFHNEKHCVLSSTWSVETEHETALNVTIKANQIEVVTSSYLGVLTNVAQRDCLGV 240 Query: 247 VPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNK 281 VP + + LN++ + P I+Y+K Sbjct: 241 VPLSVAKRWGGALNIRYFQSPFPSGQFTFQIAYHK 275 >UniRef50_B5F9Z3 Transcriptional regulator, LysR family n=3 Tax=Vibrionales RepID=B5F9Z3_VIBFM Length = 309 Score = 84.0 bits (206), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 76/275 (27%), Positives = 129/275 (46%), Gaps = 19/275 (6%) Query: 10 FDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTT 69 DLNLL F + Q L++ KA+E L+++ A+SQ+LQ+LR FND LFI+ G+ PT Sbjct: 9 LDLNLLRTFLILSQELNMRKASERLFVSQPAISQALQKLRNHFNDELFIKVRHGLKPTPF 68 Query: 70 GLNLHHHLEKNLRGLEQTINIVNK---SELKKNF-IIYGPQLISCSNNSMLIRCLRQDSS 125 L +++ L GL +N + L K I PQ+++C + ++ + + Sbjct: 69 AEELAENIQPYLDGLSSVLNASQEFKPENLNKTIKIALAPQVLTCLSGALFHDIKEKAPN 128 Query: 126 VEIECHDILMSAENAEELLVHRKADLVIT-QMPVISRSVICMPLHTIRNTLICSNRHPRI 184 V+++ ++ +E+ + L K DL I + + + ++ L TI +I HP Sbjct: 129 VDLQ---LVNWSESTFDDLAKGKLDLAINYEYDKVPKELLSKNLITITGCVIVRINHPIE 185 Query: 185 TDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMN----RKISFRGSSLLTIINSIAV 240 +T E LI G +D + E N KI FR + +I+ I Sbjct: 186 KTVATPYDFEGYELASLI--IPGWNDNKSLASEVLTNMDIEHKIGFRSELPMALIDVIQH 243 Query: 241 TDLL----GIVPYELYNSYRDF-LNLKEIKLEHPL 270 TD+ + P Y+S R L+L ++ L +P+ Sbjct: 244 TDMYFPSTSLFPIHQYSSLRRIDLSLDDVPLNYPI 278 >UniRef50_A3KIZ0 Putative LysR-family transcriptional regulatory protein n=3 Tax=Streptomyces RepID=A3KIZ0_STRAM Length = 312 Score = 84.0 bits (206), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 70/251 (27%), Positives = 115/251 (45%), Gaps = 16/251 (6%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 + FDLNL +F +Y+ S++ AE+L++T VS SL +LR F D LF R+G+G+ P Sbjct: 1 MGTFDLNLARVFVLLYETGSVTATAETLHVTQPTVSYSLGKLRRHFGDELFRRNGRGLTP 60 Query: 67 TTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQD 123 T L+ L++ L ++ T+ + + + F I L + L+ R+ Sbjct: 61 TAGARRLYEPLQRALAEIDGTVRQGDAFDAGTMSGRFTIALSDLGEATLLPRLLAAARER 120 Query: 124 S---SVEIECHDILMSAENAEELLVHRKADL-VITQMPVI-SRSVICMPLHTIRNTLICS 178 + S + D+ E+AE L R+ DL V PVI S + +PL R L+ + Sbjct: 121 APGVSFTVRPFDV----EDAESQL--RRGDLDVFVATPVITSHLTVRIPLFRERYVLMVA 174 Query: 179 NRHPRI-TDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINS 237 HPR+ D T + AE + S V + + R ++ + + Sbjct: 175 ADHPRVRGDEVTLAGLAAEHHATVFGPSGHVAPRAVLAAHGLLER-VAVDATRFSMLPYL 233 Query: 238 IAVTDLLGIVP 248 + TDL+ IVP Sbjct: 234 LEQTDLVAIVP 244 >UniRef50_B4T6D9 Putative transcriptional regulator n=36 Tax=Salmonella enterica RepID=B4T6D9_SALNS Length = 315 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 78/303 (25%), Positives = 144/303 (47%), Gaps = 39/303 (12%) Query: 8 KKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPT 67 K FD NL+ I + + + + AA+ L ITP+AVS +L+RL++ + + LF R G+ PT Sbjct: 8 KSFDYNLIKILDAVILSGNAAMAAKKLGITPAAVSLALKRLQSYYPEELFSRGKGGLIPT 67 Query: 68 TTGLNLHHHLEKNLRGLEQTINIVNKSELKKNFIIYGPQLISC------SNNSMLIRCLR 121 +++H + + ++ ++ T +K + + G ++ N+ + R L Sbjct: 68 AKAVDIHQNFSQVMKLVDDTFLCNSKKDEAFQITLLGSDIVESYYLSQLYNSDIFDRILI 127 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTL-ICSNR 180 SV MS E+ ELL + DL+I+ P++ + + + ++ + ICS++ Sbjct: 128 NHFSVRN------MSREHISELLFTAQGDLLISAEPLLESGIENQIIDSFKSFVCICSSK 181 Query: 181 HPRITDNSTYEQIMAEEFTQ----LISKSAGVD----DIQMEIDERFMN--RKISFRGSS 230 H ST Q+ F L G D ++ DE + R + +R S Sbjct: 182 HML----STLSQLSLHHFYSSRHALYQPGMGASVIYHDSELFKDELYYTGRRIVGYRSDS 237 Query: 231 LLTIINSIAVTDLLGIVPYEL---YNSYRDFLNLKEIKLEHPLP-----SIKLYISYNKS 282 L +++ I T L+ ++P +L Y ++R + +IK P P S+++Y S+NK+ Sbjct: 238 LNGLMSMIERTSLIALMPLKLALFYKNHRKY----DIKFIQPPPELALKSVQVYASWNKN 293 Query: 283 SLN 285 S N Sbjct: 294 SRN 296 >UniRef50_Q87IK7 Putative LysR-family transcriptional regulator n=4 Tax=Vibrio parahaemolyticus RepID=Q87IK7_VIBPA Length = 308 Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 71/278 (25%), Positives = 128/278 (46%), Gaps = 16/278 (5%) Query: 8 KKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPT 67 K DLNL+ F + + LS +KAA+ L +T A+S S++RL N LF + G+ I T Sbjct: 24 KAIDLNLINTFIVVTECLSYTKAADKLGVTQPAISASIKRLERTTNTKLFTKRGRNIELT 83 Query: 68 TTGLNLHHHLEKNLRGLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSVE 127 +T +K L L+Q +++++ + P + CSN I +Q Sbjct: 84 STA-------QKWLPQLQQALSVIDSVITQP-----APYNVYCSN----IYPAQQSKLEN 127 Query: 128 IECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRITDN 187 + H+ +S + LL +ADL++ + S+I + +IC N HPRI ++ Sbjct: 128 VFFHESTLSENHLFSLLYSNEADLLLGDIESREASIIVEDVCREPCVVICRNGHPRINEH 187 Query: 188 STYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLGIV 247 + E + E+ L SK + + + + + I S+ L I+ +A +D +G++ Sbjct: 188 ISTEMLSDEKHCVLASKWSFDTEFEKHLGLIVKSNNIDSIASNYLGILTHVAQSDCIGVI 247 Query: 248 PYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLN 285 P L + N+K I+ I+Y++ +N Sbjct: 248 PLSLAKKWGKTFNIKLFTSPFGACFIQYQIAYHQRKVN 285 >UniRef50_A6AYH0 Transcriptional regulator n=3 Tax=Vibrio parahaemolyticus RepID=A6AYH0_VIBPA Length = 284 Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 77/296 (26%), Positives = 138/296 (46%), Gaps = 24/296 (8%) Query: 8 KKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPT 67 KK DLNL+ F ++ S +KAAE L +T AVS S++RL A LF + G+ I+ T Sbjct: 4 KKLDLNLIQTFLIAAEYQSYTKAAEHLGVTQPAVSASIRRLEALIEYQLFTKVGRSISLT 63 Query: 68 TTGLNLHHHLEKNLRGLEQTINIV-NKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSV 126 + G NL L L Q + +V N F +Y ++ S S +S+ Sbjct: 64 SRGQNL-------LPKLRQALCMVENALSTSPQFKVYCSEVFSGSLSSI----------N 106 Query: 127 EIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRITD 186 + H+ + + ELL +K LVI + +++ +H N ++C HPRI Sbjct: 107 NVSVHEAVATKNLLLELLHQQKIALVIDSIKSDDSTLVNEVIHEEPNVVVCRKTHPRING 166 Query: 187 NSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLGI 246 +Q E+ ++++ V+ ++ N ++ SSL ++ ++ +D + I Sbjct: 167 QINTKQFFKEKHC-VLTEEWAVNQTTNH-NQYLNNVQVETVASSLSGVVLNVIESDNIAI 224 Query: 247 VPYELYNSYRDFLNLKEIKLEHPLPS--IKLYISYNKSSLNNLVFSRFIDRLNESF 300 +P+ +++ L+L+ I L P+ S + + Y+K NNL R + + E+ Sbjct: 225 IPHSFAMKWKEQLDLQVIDL--PIESNLVTYHFIYHKREKNNLHHKRIRNNIKETL 278 >UniRef50_B7VQ63 Transcriptional regulators, LysR family n=3 Tax=Vibrionales RepID=B7VQ63_VIBSL Length = 304 Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 77/291 (26%), Positives = 138/291 (47%), Gaps = 16/291 (5%) Query: 4 LYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKG 63 + D++K DLNLL +F +Y+ SI+ A+ESL +T VS +L+RL+AQ LFIR G+G Sbjct: 1 MSDMEKLDLNLLSVFLEVYRLKSITLASESLGMTQPGVSGALKRLQAQLGTDLFIREGRG 60 Query: 64 IAPTTTGLNLHHHLEKNLRGLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQD 123 I PT + L +E L G+ ++ + + + +++ + L++ + L + +D Sbjct: 61 ITPTNAAMQLALRVEPALDGITSAVSTLKQFDNQQHHVFR--ILVNEIGLTKLQPLVEKD 118 Query: 124 SS---VEIECHDILMSAENAEELLVHRKADLVIT-QMPVISRSVICMPLHTIRN--TLIC 177 + + IE + + + E+ + L ++ADL I P ++ M I + LI Sbjct: 119 DTLGNISIEFNMVPSNEEDLLQSLSMQQADLAIDIHYPQVNG---YMNQQVIEDELVLIA 175 Query: 178 SNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINS 237 HPRI + T Q E+ + + + RK+S SL+T+ Sbjct: 176 KKGHPRIDGSVTEAQYYHEKHITFRMRRSHLYTADYFTKNPIQQRKVSSECDSLMTMCVL 235 Query: 238 IAVTDLLGIVPYELYNSYRDFLNLKEIKLEHP---LPSIKLYISYNKSSLN 285 ++ +D +G N + + L+ LE P LP + I + ++ LN Sbjct: 236 VSGSDCVGSTSRGFANQFAERFQLQ--VLEQPFEVLPMKQYMIWHKRTDLN 284 >UniRef50_A8LRQ2 Transcriptional regulator, LysR family n=1 Tax=Dinoroseobacter shibae DFL 12 RepID=A8LRQ2_DINSH Length = 317 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 76/266 (28%), Positives = 122/266 (45%), Gaps = 24/266 (9%) Query: 6 DLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIA 65 D+ D L +F C++ +S+S+AA+ L IT S S L+RLR DPLF++SG+GIA Sbjct: 24 DIYGLDGRQLKLFLCVFDTVSVSRAADQLGITQSTASHGLERLRKALGDPLFVKSGRGIA 83 Query: 66 PTTTGLNLHHHLEKNLRGLE--QTINIVNKSELKKNFIIYG------PQLISCSNNSMLI 117 PT T L + L GLE +T + ++ F I P+LI + Sbjct: 84 PTDTAKELAPRVRAVLIGLEGLRTSATYDPAQDTGAFRIATNVTEILPKLI-----EIKA 138 Query: 118 RCLRQDSSVEIECHDILMSAENAEELLVHRKADLVIT-QMPVISRSVICMPLHTIRNTL- 175 R + V I HD + S NA ELL ADLVI +P ++ L++ R+ Sbjct: 139 RICKAAPHVTIHFHD-MGSRVNAGELLSAGAADLVIAVSLPSYPSLLLAERLYSDRSVCY 197 Query: 176 ICSNRHPRITDNSTYEQI--MAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLT 233 C + I + + A +F I S G E++ + + R+I + T Sbjct: 198 YCPKQRGPIESVEDFVEAKHAALDFGASIKSSVG-----QELERQGIIRRIRMTAPNSHT 252 Query: 234 IINSIAVTDLLGIVPYELYNS-YRDF 258 + + +D + +P L+ + ++DF Sbjct: 253 LAELMRDSDYVATMPLRLHKTVFKDF 278 >UniRef50_A1JL35 Putative LysR-family transcriptional regulatory protein n=1 Tax=Yersinia enterocolitica subsp. enterocolitica 8081 RepID=A1JL35_YERE8 Length = 300 Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 81/301 (26%), Positives = 133/301 (44%), Gaps = 31/301 (10%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 +KKFD NL+ + +C+ + S+++ AE L + S VS L RLR +FND + I + +G+ P Sbjct: 1 MKKFDYNLVKLLQCLIEFRSVTRTAEELDVAISTVSHGLARLRREFNDRIVINTKEGLVP 60 Query: 67 TTTGLNLHHHLEKNLRGLEQTINIVNKSELKKNFIIYGP-----QLISCSNNSMLIRCLR 121 TT + L+ H ++ I S+L +N + +SC I L Sbjct: 61 TTLAITLNSHFSSAANLIDNAIAAGKNSDLAQNSLTISASPLIQHWLSCQ-----IYQLS 115 Query: 122 QDS----SVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLIC 177 Q S S I+ D ++E L + + D+ I + I RS++ L + ++ Sbjct: 116 QSSDMGESFTIKYVDSHYTSEQRVSRLRNSEVDIDIGSILDIDRSLVSYHLGSFPLGVLL 175 Query: 178 SNRHPRITDNSTYEQIMAEEF------TQ--LISKSAGVDDIQMEIDERFMNRKISFRGS 229 SN H RI + T + + E+ TQ L + +DI + N KI S Sbjct: 176 SNSHSRIPGDITKDDWLQEQRLIWNLNTQRALFTPGRSFNDIHVN-----DNAKIETTNS 230 Query: 230 SLLTIINSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISY--NKSSLNNL 287 L + +A TD L I P+ + + N++ L + Y +Y KS NNL Sbjct: 231 --LNAVTLVANTDYLAIFPFMMQSFLAKQFNVRMSPLPFSNDGVVSYYAYINKKSDSNNL 288 Query: 288 V 288 + Sbjct: 289 I 289 >UniRef50_Q1ZAV3 Transcriptional regulators, LysR family protein n=3 Tax=Vibrionaceae RepID=Q1ZAV3_PHOPR Length = 283 Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 75/277 (27%), Positives = 126/277 (45%), Gaps = 16/277 (5%) Query: 10 FDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTT 69 DLNLL F +Y+H SI+ AAE L ++ AVS +L+RL + PLF+R G+GI+PT Sbjct: 1 MDLNLLTTFMAVYKHTSITIAAEELDVSQPAVSAALKRLESVIGKPLFVREGRGISPTGA 60 Query: 70 GLNLHHHLEKNLRGLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSVEIE 129 + L + +E + LE TI + ++ +Y CS + + C ++ I+ Sbjct: 61 AVALANKIESPITVLE-TIG-----QQQEYLNVY------CSEVVLHLVCHVEN----IK 104 Query: 130 CHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRITDNST 189 + + + + L +K DLVI M S+I H T + HPRI T Sbjct: 105 LSETPLEEKAIFDDLFTQKVDLVIDVMSSKQHSLIVEEFHQEEPTCLTRLDHPRIQSQIT 164 Query: 190 YEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLGIVPY 249 E+ EE + + I ++ RK+ SL +++ + +D + P Sbjct: 165 LEEYFEEEHVAVKITRNNTNTINNLSEKPIEPRKVKIETCSLSSMLILSSESDYIASSPR 224 Query: 250 ELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNN 286 + LNL+ K + +KLY+ Y++ N+ Sbjct: 225 SIAEKLAPKLNLRIHKYPFAIKPLKLYMIYHRRYAND 261 >UniRef50_Q5P743 Transcriptional regulator, LysR family n=2 Tax=Betaproteobacteria RepID=Q5P743_AZOSE Length = 301 Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 74/294 (25%), Positives = 125/294 (42%), Gaps = 8/294 (2%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 ++ ++ L +F+ IY+ S+S+AAE+L + AVS +L +LR F DPLF+R+ G+ P Sbjct: 1 METLEIRQLSVFDEIYKTRSVSRAAENLGLGQPAVSIALGKLREHFGDPLFVRTSAGMEP 60 Query: 67 TTTGLNLHHHLEKNLRGLEQTIN---IVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQD 123 T G L + + + + + ++ F I + S +L R + Sbjct: 61 TPLGEELAEPIRVAVAAVSAASGHRAEFDPTRARRTFRI---AMTDISQLVLLPRLWERL 117 Query: 124 SSVEIECH-DILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHP 182 +V H DI + N +L + D+ + MP + L + S HP Sbjct: 118 RTVAPGIHIDIANLSANTAGMLESGEVDVALGFMPQLEAGFYQQALFRQHYVCMASATHP 177 Query: 183 RITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTD 242 RI T Q AEE + + G I EI + + R++ R S + I + T Sbjct: 178 RIRRGLTLAQFEAEEHAVVSTSGTGHLIIDREIARQDIKRRVVLRIPSFVGIAYVVERTA 237 Query: 243 LLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRL 296 LL +P L D L+ + PLP + ++ NN +R++ L Sbjct: 238 LLVTIPQRLGELLADEERLRVYPVPFPLPEYAVKQHWH-GRYNNDPGNRWLRAL 290 >UniRef50_B5JUQ0 Transcriptional regulator, LysR family, putative n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JUQ0_9GAMM Length = 300 Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 69/290 (23%), Positives = 133/290 (45%), Gaps = 4/290 (1%) Query: 6 DLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIA 65 +L+ DLNL +FE I + S++ AA L ++ A S +L+RLR D LF+R+ +G+ Sbjct: 4 NLRSVDLNLFPVFEAIMEQGSLNMAACHLGMSQPAASAALKRLRLTIKDELFVRTRRGLE 63 Query: 66 PTTTGLNLH---HHLEKNLRGLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQ 122 PT L L+ HHL ++LRG + N + ++ F + G L+ LR+ Sbjct: 64 PTARALELYPVVHHLLESLRGEMERANQFDPLFCERIFKVAGGDYFDMVFMGRLMNMLRE 123 Query: 123 DSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHP 182 S+ +++ ++ + + L+ K DL + I+ + + L +++ + HP Sbjct: 124 -SAPKVQVESVIHGFQESLNLIQRGKLDLCLHYDKEIAHELPTLKLFEESMSVLMAADHP 182 Query: 183 RITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTD 242 + +A E L S + + + + NR + R SS+ +++ +I + Sbjct: 183 YADKQLSLSDYIALEHVVLPKLSGNANQLDVILGGFNENRCVRARVSSVSSMVMAIKQSY 242 Query: 243 LLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRF 292 L+G +P + + + +L P I +Y+S+ S + V F Sbjct: 243 LIGTIPTRMASILCEGYDLVFKPFPKEAPPIPIYLSWAPFSDKDSVHRWF 292 >UniRef50_A6V8B0 Transcriptional regulator, LysR family n=10 Tax=Proteobacteria RepID=A6V8B0_PSEA7 Length = 310 Score = 80.9 bits (198), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 74/285 (25%), Positives = 129/285 (45%), Gaps = 17/285 (5%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 L + DLNL +FE +Y+ ++++AA L+++ SAVS +L RLR Q DPLF+R G+G+AP Sbjct: 10 LSRLDLNLFRVFEVVYRERNLTRAAALLHLSQSAVSHALARLREQLGDPLFVRQGRGVAP 69 Query: 67 TTTGLNLHHHLEKNLRGLEQTINIVNKSELK---KNFIIYGPQLISCSNNSMLIRCLRQ- 122 T L + L GL++++ + + + F++ P+ + + LRQ Sbjct: 70 TPLAERLAPGIRDALAGLQRSVARCQSFDPRHDARTFLLNMPEQLEPLVLPDFLGHLRQV 129 Query: 123 DSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHP 182 VE+ C L AE EL R V P + ++ PL R ++ P Sbjct: 130 APQVEVRCSS-LHWAELKTELEAGRIDAAVEVARPTDA-ALRRQPLLEDRLWVMAG---P 184 Query: 183 RITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTD 242 + E+ +A + S+ G+ + + + + RK+ R L+ +A Sbjct: 185 EFAGELSAERYLAAAHVAVTSRRRGICIEDLALGQLGLTRKVRQRCQHYLSAALLVAQGG 244 Query: 243 LLGIVPYELYNSYRDFLN--LKEIKLEHP--LPSIKLYISYNKSS 283 L L Y + LN L L P LP++ L + +++ + Sbjct: 245 YL----LTLTRRYAELLNRGLGNRLLPMPLALPAVALNLYWSRQA 285 >UniRef50_Q5E2I6 DNA-binding transcriptional activator n=65 Tax=Gammaproteobacteria RepID=Q5E2I6_VIBF1 Length = 323 Score = 80.9 bits (198), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 76/294 (25%), Positives = 145/294 (49%), Gaps = 37/294 (12%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 L+ DLNLL +F+ + Q +I++AA++L ++ AVS ++ RL+ FND LFIR G+GI P Sbjct: 18 LRGVDLNLLTVFDAVMQEQNITRAAQNLGMSQPAVSNAVSRLKLMFNDELFIRHGRGIQP 77 Query: 67 TTTGLNLHHHLEKNLRGLEQTINIVNKSELKKNFIIYGPQ---------LISCSNNSMLI 117 T L + Q + +V K+EL + + P+ + S S+ Sbjct: 78 TQRARQL-------FAPMRQALQLV-KNELPSS--TFSPETSMRQFKLSICSPSDIRFAP 127 Query: 118 RCLR--QDSSVEIECHDILMSAENAEEL---LVHRKADLVITQMPVISRSVICMPLHTIR 172 R ++ Q+ + I + +S E+ ++ L +++ D VI + + L T Sbjct: 128 RIMKDIQNKAPHI---SLKLSGEHEPDIAQKLRYQEVDFVIDYVRFDEPGFMSTELFTDE 184 Query: 173 NTLICSNRHPRITDNSTYEQIMAEEFT--QLISKSAGVDDIQMEIDERFMNRKISFRGSS 230 ++ S HPR+ + EQ+ +E+ I+ + G D + +D + + +++G+S Sbjct: 185 LVVVASVNHPRLQNGINKEQLASEKHAVPARIANTKGFAD-HLYVDSLY---EQAYKGAS 240 Query: 231 LLTIINSIAVTDLLGIVPYELYNSY--RDFLNLKEIKLEHPLPSIKLYISYNKS 282 + I+ ++ ++L+ + P L NS RD L + + +E I Y+S++ S Sbjct: 241 ISNILYVVSQSELITVAPKWLVNSMPNRDQLMVLPLPIES--KGISGYLSWHDS 292 >UniRef50_A6VUW1 Transcriptional regulator, LysR family n=2 Tax=Marinomonas RepID=A6VUW1_MARMS Length = 321 Score = 80.1 bits (196), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 69/254 (27%), Positives = 118/254 (46%), Gaps = 23/254 (9%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 L DLNLL +F+ + + L+++KAA L ++ AVS+SL RLR FNDPLFIR+ G++ Sbjct: 21 LSDIDLNLLYVFQVLIEELNVTKAATRLNVSQPAVSRSLSRLRDVFNDPLFIRTSHGLSA 80 Query: 67 TTTGLNLHHHLEKNLRGLEQTINIVNKSEL-----KKNFIIYGPQLISCSNNSMLIRCLR 121 T +L L L+GLE +++ SE K+ FI+ + + ++ R Sbjct: 81 TAKTQDLAPLLADTLKGLE---SLIQPSEFTPQSSKRRFILSTTDFGTLTVLPKILDKFR 137 Query: 122 Q---DSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISR----SVICMPLHTIRNT 174 Q D+ ++++ + M AE L D+ + V+S+ + M L + R Sbjct: 138 QKAPDAILDVKSWNEDMVAE-----LDQTNIDVAVA---VLSKEPPAGIRAMRLKSDRMV 189 Query: 175 LICSNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTI 234 + HPRI T E + Q++ + E+++ R +S + + Sbjct: 190 CLARKNHPRIEGKLTLESYLQVSHVQVVLGRREYFAVDRELEKMGHKRHVSVHLPNFVPA 249 Query: 235 INSIAVTDLLGIVP 248 + +DLL VP Sbjct: 250 ARVVMDSDLLLTVP 263 >UniRef50_A6ARN3 Transcriptional regulator, LysR family n=4 Tax=Vibrio RepID=A6ARN3_VIBHA Length = 305 Score = 80.1 bits (196), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 74/263 (28%), Positives = 128/263 (48%), Gaps = 22/263 (8%) Query: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 M + + DLNLLV F +Y++ S+S AAE +++ SA+S SL RLR F+DPLF R Sbjct: 1 MKDDIQWRNIDLNLLVTFSYLYRYRSVSLAAEKSFVSQSAMSHSLSRLRVLFDDPLFERK 60 Query: 61 GKGIAPTTTGLNLHHHLEKNLRGLEQTI--NIVNKSE-LKKNFIIYGPQLISCSNNSMLI 117 G +APT H++ + L +I +++ KS L +N+ G I ++ + I Sbjct: 61 GHKMAPTEHA----HYIAPTVHHLLDSIAKDLLTKSAFLPENYA--GVCRIGLTDYAEFI 114 Query: 118 RC------LRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTI 171 +R+ + E + I ++ N + H K D++I MPV+ + L+T Sbjct: 115 FAPLLYDEIRKRAP-EAQISFINVNRSNYVAITEHDKLDVIIGSMPVLDDNFESQYLYTE 173 Query: 172 RNTLICSNRHPRITDNSTYEQIMA-EEFTQLISKSAGVDDIQME--IDERFMNRKISFRG 228 ++ +C R+ T I A Q + G Q++ + E ++RK++ Sbjct: 174 KHVCLCDK---RVLKGETQLSIHAFANIEQALVSPDGSLSTQVDKKLAEHGLSRKVTVAS 230 Query: 229 SSLLTIINSIAVTDLLGIVPYEL 251 + LTI N + +L+ IVP ++ Sbjct: 231 RNFLTIRNLLKQRELVAIVPEKM 253 >UniRef50_A6CV60 Transcriptional regulator, LysR family protein n=1 Tax=Vibrio shilonii AK1 RepID=A6CV60_9VIBR Length = 317 Score = 80.1 bits (196), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 69/248 (27%), Positives = 124/248 (50%), Gaps = 12/248 (4%) Query: 27 ISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTTGLNLHHHLEKNLRGLEQ 86 +S+AAE LY++ A+S++L RLRA F+DPLF R G+ PTT L L L++ L ++ Sbjct: 28 VSRAAEKLYLSQPAMSRTLSRLRALFDDPLFYRESNGLQPTTKTLELEPELDQILLSIDA 87 Query: 87 TINIVN--KSELKKNFIIYGPQLISCSNNSMLIRCLRQ-DSSVEIECHDILMSAENAEEL 143 +N +N S ++ F I P L+S + L + +++ + +E + S+ + +L Sbjct: 88 LLNGLNFSPSRCERAFRISVPPLMSRFLTAPLAKAIKEVAPNASLEEYP---SSLDPTQL 144 Query: 144 LVHRKADLVITQMPVI-SRSVICMPLHTIRNTLICSNRHPRITDNS-TYEQIMAEEFTQL 201 L + D I V+ S C + + + SN HP + + + + + +F L Sbjct: 145 LKDGQVDFSIHVEEVVQSEEYHCEKIGSTYPVIYGSNSHPLLDKQTISIKDCLEYQFVDL 204 Query: 202 I----SKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLGIVPYELYNSYRD 257 S ++ I +E+ + ++R I+ + L T++ S+ TD L I + L ++ Sbjct: 205 SLDVRSTQHYLNPIDIELANQGLSRTIALKSGQLATLMESLEDTDRLMISSHALAQTFEK 264 Query: 258 FLNLKEIK 265 NLK IK Sbjct: 265 SSNLKIIK 272 >UniRef50_B2VHH8 Transcriptional regulator, LysR family n=1 Tax=Erwinia tasmaniensis RepID=B2VHH8_ERWT9 Length = 302 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 70/279 (25%), Positives = 130/279 (46%), Gaps = 23/279 (8%) Query: 11 DLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTTG 70 DLNL+ +F IY+ S+S AA L+IT + S +L RLR + ++ LF RS KG+ PT T Sbjct: 6 DLNLVRVFIAIYETRSVSGAAARLFITQPSASYALARLRVETDNELFKRSRKGMLPTPTA 65 Query: 71 LNLHHHLEKNLRGLEQTINIVNKSELKKN---FIIYGPQLISCSNNSMLIRCLRQDSS-- 125 L+ +K++ G+E+ + + + F + L L++ LR + Sbjct: 66 NQLYEVFKKSISGIEKAVADTRSFSPETSFHRFRLALSDLGELLLLPRLVKHLRTVAPNV 125 Query: 126 ----VEIECH--DILMSAENAEELLVHRKADLVITQMP-VISRSVICMPLHTIRNTLICS 178 + +E H D + + + L R + + Q ++ +C+ + Sbjct: 126 RLEVIPVEMHKMDEWLLTGHIDAALCSRNERISLAQRDRIMDERYVCL----------LN 175 Query: 179 NRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSI 238 N+HPRI D T + E+ ++S S+G ++ I E R+I+ + I Sbjct: 176 NQHPRIGDTLTLPAWLNEQHI-MVSASSGHYMVEERIKEYGFERRIALEVPHFAALGELI 234 Query: 239 AVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYI 277 A ++LL ++P+ Y N + ++L LP++++Y+ Sbjct: 235 ASSELLVLLPFSAAKVYAARGNGRIVELPFELPNLEVYL 273 >UniRef50_Q3KA14 LysR family regulatory protein n=24 Tax=Bacteria RepID=Q3KA14_PSEPF Length = 314 Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 68/252 (26%), Positives = 115/252 (45%), Gaps = 15/252 (5%) Query: 6 DLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIA 65 +L K DLNL ++F+ IY ++++A + + IT AVS +L RLR FNDPLF+R+ +G+ Sbjct: 2 NLSKVDLNLFIVFDAIYTEANLTRAGQIVGITQPAVSNALARLRETFNDPLFVRTAQGMV 61 Query: 66 PTTTGLNLHHHLEKNLRGLEQTIN---IVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQ 122 PT N+ + L L ++ I N S+ K + I L L + LR+ Sbjct: 62 PTPMAQNIIGPVRNALSLLRVSVQESRIFNPSQAVKTYRISMTDLTEAVILPPLFQRLRR 121 Query: 123 DSSVEIECHDILMSAENAEELLVHR---KADLVITQMPVISRSVICMPLHTIRNTLICSN 179 + I + E +EL R D + P + R V M + +C+ Sbjct: 122 LAPTVIIESFLSKRRETTKELAAGRLDFAVDAPLNTDPQV-RHVKLM-----EDRYVCAM 175 Query: 180 R--HPRITDNS-TYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIIN 236 R HP T T + ++ + S+ +G+ + + + + + RKI+ R L Sbjct: 176 RKGHPLATKEKFTLDDYLSLTHIHISSRRSGLGHVDLALGKMGIQRKIALRSQHYLMASQ 235 Query: 237 SIAVTDLLGIVP 248 + TD++ VP Sbjct: 236 VLQQTDMVMTVP 247 >UniRef50_Q7MCM8 Transcriptional regulator n=8 Tax=Vibrionaceae RepID=Q7MCM8_VIBVY Length = 298 Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 69/271 (25%), Positives = 127/271 (46%), Gaps = 13/271 (4%) Query: 11 DLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTTG 70 D NLL +F +Y+H SI+ AA+++ +T VS L+RL+ Q LF R G+GIAPT Sbjct: 6 DFNLLKVFVTVYRHRSITLAADAMGLTQPGVSGILKRLQEQLGVTLFTRDGRGIAPTHHA 65 Query: 71 LNLHHHLEKNLRGLEQTINIVN--KSELKKNFIIYGPQLISCSNNSMLIRCLRQDSS--- 125 L +E L + + + +++ + F+IY P+ + + L+ + DS+ Sbjct: 66 HELARQVEPALSQIHNALESLEAFRTDTYRKFVIYAPEPLMLT----LLPKIEGDSTLGK 121 Query: 126 VEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRIT 185 ++IE + + L ++ADL I + + S L LI HPRI Sbjct: 122 IDIELQHMPYDVDEQFTRLNQQQADLAIDFVHHSAPSFYSEKLMNDEICLIARRGHPRIQ 181 Query: 186 DNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMN-RKISFRGSSLLTIINSIAVTDLL 244 + ++ E+ L + V + E F+N R+++ S++ ++ +A +D + Sbjct: 182 GAISRDEYYQEKHITLKMRRENV-YLADYFTEEFLNVRRVAAECDSMVAQMSLVATSDCI 240 Query: 245 GIVPYELYNSYRDFLNLKEIKLEHPLPSIKL 275 +V L + + L L+ L P+ +I + Sbjct: 241 AMVTRSLAEQFAETLGLQ--VLHSPMTAIPI 269 >UniRef50_D1TCI7 LysR family transcriptional regulator n=2 Tax=Burkholderia RepID=D1TCI7_9BURK Length = 329 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 77/317 (24%), Positives = 136/317 (42%), Gaps = 65/317 (20%) Query: 1 MANLY--DLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFI 58 MAN+ D ++FDLNLLV F + + S+++AA+ L + AVS +L+RLR F D LF+ Sbjct: 14 MANIIENDFRRFDLNLLVTFRALLEERSVTRAAQRLLLGQPAVSGALKRLRETFGDELFV 73 Query: 59 RSGKGIAPTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIY------------ 103 R+ +G+ PT L L +E L+ L Q + ++ + + ++ F I Sbjct: 74 RTPQGMTPTPRALELARQIEPFLQSLHQALTQPSVFDPASAQRVFRIGLSDSLELLLMPE 133 Query: 104 ----------GPQLISCSNNSMLIRCLRQDSSVEIECHDILMSAENAEELLVHRKADLVI 153 G +LI+ S +S + D ++E+ V R+ Sbjct: 134 IMARLAAAAPGVKLIARSTDSTRAAAMLDDGAIELAVG-------------VFRECVPWQ 180 Query: 154 TQMPVISRSVICMPLHTIRNTLICSNRHPRITDNSTYEQIMAEEFTQ----LISKSAGVD 209 MP+ S + ++ N + R + + +EF + L S SA Sbjct: 181 RLMPLFSWRFV-----SVYNPQLVRTRR---------KHLSMDEFLRHRHVLTSFSA--- 223 Query: 210 DIQMEIDERF----MNRKISFRGSSLLTIINSIAVTDLLGIVPYELYNSYRDFLNLKEIK 265 +++ IDER +NR++ F S+ T + T + VP + +RD L L Sbjct: 224 ELRGFIDERLELQGLNREVVFSSSNFATSPFIVQRTAAIATVPEFIGRVWRDTLGLALSP 283 Query: 266 LEHPLPSIKLYISYNKS 282 L +P ++ + + + Sbjct: 284 LPFEVPGYEVSLMWAAA 300 >UniRef50_A5WDE8 Transcriptional regulator, LysR family n=1 Tax=Psychrobacter sp. PRwf-1 RepID=A5WDE8_PSYWF Length = 302 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 69/248 (27%), Positives = 115/248 (46%), Gaps = 12/248 (4%) Query: 11 DLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTTG 70 D+ LL++F+ IYQ +ISKAA+ L I A S L +LR F+DPLF+R G + PT T Sbjct: 5 DVRLLLLFQAIYQQNTISKAAQKLDIGQPAASLGLNKLRQHFDDPLFVRVGNQMQPTQTA 64 Query: 71 LNLHHHLEKNLRGLEQTINIVNKSELKKNFIIYGPQLISCSNN---SMLIRCLRQDSSVE 127 NL + L+ + + + E K + + + S+ LI+ L+Q + Sbjct: 65 QNLFPLVNNALQHIRAVNDYTHHFEPKNSSRRFHISMTDISHMIIVPKLIKYLKQHAP-- 122 Query: 128 IECHDIL-MSAENAE--ELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRI 184 H L +SA N++ + + DL I +P + +++ HPR+ Sbjct: 123 ---HTKLDISAINSDTPSRMSSGEIDLAIGYIPHLEAGFFQQTFFEQHYSVVVRQDHPRL 179 Query: 185 TDNS-TYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDL 243 T N+ T E E+ +IS G ++ + R + R I+ + L + I TDL Sbjct: 180 TQNTLTLEAYQQEQHADVISSGTGHYLLEDHLRRRHIKRHIAITLPTYLGVGLIIQQTDL 239 Query: 244 LGIVPYEL 251 + +P +L Sbjct: 240 VATLPDKL 247 >UniRef50_A4BGW0 Probable transcription regulator protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BGW0_9GAMM Length = 304 Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 36/67 (53%), Positives = 50/67 (74%) Query: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 MA+L L + DLNLL + E +YQH ++++AAE+L ITPSAVS +L+RLR +DPLF R Sbjct: 1 MASLKTLNQLDLNLLKVLEAMYQHRNLTRAAEALNITPSAVSHALKRLRDSLDDPLFERR 60 Query: 61 GKGIAPT 67 G+ + PT Sbjct: 61 GQQMTPT 67 >UniRef50_Q085G5 Transcriptional regulator, LysR family n=1 Tax=Shewanella frigidimarina NCIMB 400 RepID=Q085G5_SHEFN Length = 318 Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 80/285 (28%), Positives = 133/285 (46%), Gaps = 28/285 (9%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 L DLNLL +F + QH SI++AAE L +T S+VS ++ RL+ LFIR G+GI P Sbjct: 17 LPMLDLNLLRVFCTVCQHSSITRAAEQLGLTQSSVSNAINRLKHALECELFIRIGRGIEP 76 Query: 67 TTTGLNLHHHLEKNLRGLEQT---INIVNKSELKKNFIIYG---------PQLISCSNNS 114 T G ++ + ++ L +EQT I + S K+ F IY PQL +N+ Sbjct: 77 TAIGTHIFNTVQPMLDTIEQTLMGIKAFDPSTSKRVFTIYANEAVIDLLQPQL----DNA 132 Query: 115 ML---IRCLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTI 171 + +R + ++S V AE ++L + +K DLVI +P + C + Sbjct: 133 LAHLSVRVVLRNSPV--------FEAEQFQDLQM-QKVDLVIDIVPPKLKMFSCQKVAQE 183 Query: 172 RNTLICSNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSL 231 R + HP I ++ + + A E + + + R + SSL Sbjct: 184 RIVCVVRQGHPVIKNHLSRDDYFAAEHVMYRFHRDNMRVADIIANAPLPQRTLYSEQSSL 243 Query: 232 LTIINSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLY 276 L++++ I+ ++ +GI PY +Y + L ++L I LY Sbjct: 244 LSMLSLISKSNAIGIAPYIFTQNYAELFKLTLLELPFETRPIDLY 288 >UniRef50_A5L763 Transcriptional regulator n=1 Tax=Vibrionales bacterium SWAT-3 RepID=A5L763_9GAMM Length = 301 Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 63/279 (22%), Positives = 139/279 (49%), Gaps = 4/279 (1%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 +K+F+LNL+ F IY+ +++ AAE L I+ ++S L++LR ++ D LF+R + P Sbjct: 1 MKRFNLNLIYYFIAIYEEGNLTYAAERLNISQPSLSAHLKQLRDEYRDLLFVRKSYTLEP 60 Query: 67 TTTGLNLHHHLEKNLRGLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSV 126 T +L+ ++ + + ++ + E K+ + +S S++ +L + L + Sbjct: 61 TPVANDLYPIFKQAHKLVSHSLPETHDFEPKECSYTFRIAAMSISSSVILPQILDRIQEE 120 Query: 127 EIECH-DILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRIT 185 EC +++ E+ + +K DLV+ + +++ + ++CS H +I Sbjct: 121 APECVIEVVNIKEDMATDIREKKIDLVV-DLTNAHPTLLSQEIWGDELCMVCSQNHSQIN 179 Query: 186 DNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLG 245 + T EQ ++ + L + V+ + F +RK++ + +S+ ++I +D + Sbjct: 180 EQVTLEQYLSAKHVMLTHDNYRVNQLTEFHSPIFADRKVARKLNSIADFSDTIYNSDWIA 239 Query: 246 IVPYELYNSY--RDFLNLKEIKLEHPLPSIKLYISYNKS 282 P + N+Y +D + L E+ E+ PS+ +Y N++ Sbjct: 240 TFPKGVANAYFDKDKIKLLELPFEYIKPSLSVYWHSNRN 278 >UniRef50_C5A8T0 Transcriptional regulator, LysR family protein n=2 Tax=Proteobacteria RepID=C5A8T0_BURGB Length = 313 Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 74/314 (23%), Positives = 135/314 (42%), Gaps = 31/314 (9%) Query: 3 NLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGK 62 N ++ DLNLL +FE ++ S+AA L +T SAVS +L+RLRA + DPLF+R+G+ Sbjct: 2 NAMNIADVDLNLLKVFEVLFDEGGASRAAIRLDLTQSAVSAALRRLRALYGDPLFVRTGR 61 Query: 63 GIAPTTTGLNLHHHLEKNLRGLEQTINIVNKS-----------ELKKNF-IIYGPQLISC 110 G+APT L + + L Q++ + + +F I +G +LI C Sbjct: 62 GLAPTARARELKPLIGEALDRCRQSLAFGAPAPASFEGRAVSVAMSDDFEIAFGGRLIEC 121 Query: 111 SNNSMLIRCLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHT 170 + + L LR + + H ++ + L +R+ DL I +R + M L Sbjct: 122 A--ARLAPGLR---VIFRQTHSQIVG-----DALANREVDLAIAAGGFATRGLGHMALGH 171 Query: 171 IRNTLICSNRHPRITDNSTYEQIMAEEFTQLISKSAG----VDDIQMEIDERFMNRKISF 226 R + T + +A E ++ S G VD+ EI R R + Sbjct: 172 GRYACLVDPAAAPGRLVLTLDDFLARE--HVLVSSGGVVGIVDEALAEIGRRRTVRASTT 229 Query: 227 RGSSLLTIINSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNN 286 ++L ++ T + +P+ + L + +P+ + + + S+L + Sbjct: 230 HFAALPFLLRG---TPAVATIPHHAAEALARMTGLGLVACPLAMPAYPVALGWRVSTLRD 286 Query: 287 LVFSRFIDRLNESF 300 ++ + +SF Sbjct: 287 AAVAKLRQAIVDSF 300 >UniRef50_C3MFM7 Putative transcriptional regulator, LysR family n=1 Tax=Rhizobium sp. NGR234 RepID=C3MFM7_RHISN Length = 409 Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 76/290 (26%), Positives = 133/290 (45%), Gaps = 11/290 (3%) Query: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 + L +L FDLNLL +F+ + + S+++A + + ++ AVS +L+RLR +D LFIR Sbjct: 39 VGGLVNLNAFDLNLLRVFDALIRERSVTRAGDQIGLSQPAVSSALRRLRDLLDDQLFIRR 98 Query: 61 GKGIAPTTTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLI 117 G + PT L L + L +E ++ + + +++ F + G + S S L Sbjct: 99 GNDMIPTPRALELGSPVRDALGKIELALHKRRHFDPATIQRRFTLLGSDIFSVMAMSALS 158 Query: 118 RCLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLIC 177 RC +++ I H + + NAE LL D+ + + V MPL ++ Sbjct: 159 RCCAEEAP-GISLHLVDSALGNAERLLQEDAVDIALETELNVPDWVSSMPLLAAPYVVVA 217 Query: 178 SNRHPRITDN--STYEQIMAEEFTQL---ISKSAGVDD--IQMEIDERFMNRKISFRGSS 230 S RHP IT + E I + F +L SAGV + + E+ + R ++ Sbjct: 218 SARHPGITAAGVAAREAIPLDLFCRLHHVARSSAGVVNCVVDAELAKVGRKRHVALTMPH 277 Query: 231 LLTIINSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYN 280 L + + A + L VP + L LK + PLP+ + + ++ Sbjct: 278 TLGVAVATANSLHLATVPRQFAELMASHLGLKIYEAPVPLPATNINVFWH 327 >UniRef50_A1U2R6 Transcriptional regulator, LysR family n=3 Tax=Marinobacter RepID=A1U2R6_MARAV Length = 300 Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 76/299 (25%), Positives = 126/299 (42%), Gaps = 17/299 (5%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 L + DLNLL +F+ IY+ S+++AA++L++T A+S SL RLR FNDPLF R G + P Sbjct: 3 LNRPDLNLLHVFDTIYREGSLTRAAKALHLTQPAISHSLARLRDHFNDPLFTRQGNQMVP 62 Query: 67 TTTGLNLHHHLEKNLRGLEQTINIVNK------SELKKNFIIYGPQLISCSNNSMLIRCL 120 T LE GL Q + VN+ + +K + + ++ + LI L Sbjct: 63 TPLARRF---LESMRPGLNQIQSAVNQFHAFDPASQRKTYALGLRDVLESTFLPQLISKL 119 Query: 121 RQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNR 180 +E++ + + + E L K D I + +S L R ++ Sbjct: 120 APYPDMEVQSQRV--ARRDMETQLAAGKLDFAIDVLLPVSNQTSHELLRQDRLVVLARKG 177 Query: 181 HPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAV 240 HP I + + S++ G E+ R I R + Sbjct: 178 HPVIAQGLDMASYLEARHILVSSRAEGPGIEDFELSRHGAQRTIRLRCQHYYAACRVVES 237 Query: 241 TDLLGIVPYELYNSYRDFLNLKEIKLEHP---LPSIKLYISYNKSSLNNLVFSRFIDRL 296 +DLL +P E Y R +I++ P +PSI +++ ++K+ F D L Sbjct: 238 SDLLLTMP-ETYA--RIIAQNTDIEVLAPPVEMPSIDVHLYWHKAYEQEPALVWFRDLL 293 >UniRef50_A6T413 Transcriptional regulator, LysR family n=1 Tax=Janthinobacterium sp. Marseille RepID=A6T413_JANMA Length = 302 Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 70/282 (24%), Positives = 122/282 (43%), Gaps = 30/282 (10%) Query: 6 DLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIA 65 ++ DLNLLV F+ I + +++ AA L ++ A+S +L RLR FNDPLF+R+ +G+ Sbjct: 2 NIASVDLNLLVAFDAIVKERNVTSAAVRLGVSQPAMSNALARLRIIFNDPLFVRTSQGMQ 61 Query: 66 PTTTGLNLHHHLEKNLRGLE------QTINIVNKSELKKNFIIYG---------PQLISC 110 PT L +E R E Q ++ + + K F Y P+L+ Sbjct: 62 PTPYAEQL---IEPVSRACELITSALQINSVFDPATTTKTFSFYMTEIGEILLLPKLLKH 118 Query: 111 SNNSMLIRCLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHT 170 + C+R E + A+E + + + DL + P + L+T Sbjct: 119 IQVAAPNACVRVRRIPE----------QGAKEAMANGEIDLAVGLFPYLKAGFYQQRLYT 168 Query: 171 IRNTLICSNRHPRITDNSTYEQIMAEEFTQLISKSAGVD-DIQMEIDERFMNRKISFRGS 229 + I HP + D+ T +Q + ++S + G D I+ + + RKI Sbjct: 169 DKFACIVRQGHPTVHDSLTPQQYVDTPHVIVMSANTGHDAAIEKILLTEHLRRKIVMTSQ 228 Query: 230 SLLTIINSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLP 271 + L + I TD + +P+ + + +I LE P+P Sbjct: 229 NFLVLPMIIEQTDAIATIPFRMAQKIASYSTGIKI-LESPIP 269 >UniRef50_B0C5B7 Transcriptional regulator, LysR-family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C5B7_ACAM1 Length = 300 Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 63/257 (24%), Positives = 114/257 (44%), Gaps = 13/257 (5%) Query: 6 DLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIA 65 DL+ FDLNLLV+ + + S+SK AE L ++ AVS +L RLR DP+ +R G + Sbjct: 2 DLRGFDLNLLVVLHILLKERSVSKTAERLQLSQPAVSAALNRLRTALKDPILVRDGLQMV 61 Query: 66 PTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFII----YGPQLISCSNNSMLIR 118 PT L ++ + +EQT+ + S + + F I YG ++ ++ R Sbjct: 62 PTPRAEQLVEPVQAIVSAIEQTLADPQPFDYSSISRTFRIATNDYGAFVLV---PFLMNR 118 Query: 119 CLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICS 178 + + E DI + E A L + DLVI + L + T + Sbjct: 119 MQKIAPHLTFEIWDIALDVETA---LREGEIDLVIADAWTLRNCKCRKTLFSETFTCLVR 175 Query: 179 NRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSI 238 HPR+ T + + E+ + ++ ++ + + ++ R++ +L I + Sbjct: 176 QNHPRVDTQLTMDDYLQEKHALVSARGRVTGNVDIALSQQNKQRQVQITLPHILAIPAMM 235 Query: 239 AVTDLLGIVPYELYNSY 255 A TD++ V + N + Sbjct: 236 AATDMIVTVATRIANRF 252 >UniRef50_B7VJC4 Putative LysR-like regular protein n=4 Tax=Vibrionales RepID=B7VJC4_VIBSL Length = 308 Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 71/260 (27%), Positives = 123/260 (47%), Gaps = 23/260 (8%) Query: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 MA+ ++ K DLNLL+ + +Y+ S+SKAAE Y++ SA+S SLQRLR F+DPLF R Sbjct: 1 MAD-FNWKGIDLNLLIALQALYKTNSVSKAAERCYVSQSAMSHSLQRLRKLFDDPLFERV 59 Query: 61 GKGIAPTTTGLNLHHHLEKNLRGLEQTI-------NIVNKSELKKNFIIYGPQLISCSNN 113 G + T + L +E L ++ + K K Y Q+ + + Sbjct: 60 GSKMEATDRAIELSSTVEALLNTIQSEVLLSKSFDAATYKGTWKIGLTDYAEQMFAPA-- 117 Query: 114 SMLIRCLRQDS-SVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIR 172 L ++Q S + ++ ++ S N +++ K D+ I +S+ L+T + Sbjct: 118 --LFDLIKQSSPNSQVVLFNVNRS--NYQQVFEDAKLDMAIGSFGEVSKQYRTTHLYTEQ 173 Query: 173 NTLICSNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERF----MNRKISFRG 228 + + I + EQ +A E L+S + ++ +D+R +RK++ Sbjct: 174 HVCLFDKSVVSIEGPISLEQFVAVEHA-LVSPAGS---LKTGVDKRLAELGFSRKVAICS 229 Query: 229 SSLLTIINSIAVTDLLGIVP 248 S+ LT+ I +LL IVP Sbjct: 230 SNFLTVKRLIRGRELLCIVP 249 >UniRef50_A6FDU8 Transcriptional regulator, LysR family protein n=1 Tax=Moritella sp. PE36 RepID=A6FDU8_9GAMM Length = 280 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 79/288 (27%), Positives = 130/288 (45%), Gaps = 33/288 (11%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 + FD+NL+ F +Y+ SI+KAAE L ++ A+S +++RL PLFIRSG+ ++P Sbjct: 1 MHDFDMNLIKPFAKVYELNSITKAAELLNVSQPAISGAIKRLETYLGYPLFIRSGRKLSP 60 Query: 67 TTTGLNLHHHLEKNLRGLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSV 126 T N + + L ++ + K++FI+Y P+ S+L++ Sbjct: 61 TPNAQNFYSQVSTVLEIVDNALGN------KEHFIVYAPE-------SILLKLSGIHDIQ 107 Query: 127 EIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRN---TLICSNRHPR 183 IE D S E+ L RK DL I + S C L +R L+C HP Sbjct: 108 LIESSD---SEEDTFNDLRMRKIDLAIDNVTQQDNS-FCFEL--VRKEHLKLVCCKNHPT 161 Query: 184 ITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMN-----RKISFRGSSLLTIINSI 238 +TD+ I E + QL + + M E F R I + SS ++ ++ Sbjct: 162 VTDS-----ITMEHYLQLGHVAMKLVRNNMRAVEYFAKTALKARDIRVQVSSPANMMLAV 216 Query: 239 AVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNN 286 +D + +P L + D L LK I+ + I ++ Y+K L + Sbjct: 217 QNSDYIAAIPEGLCH-IADSLGLKVIEPPFTMKPIDFHLIYHKRYLKD 263 >UniRef50_A6B1R6 Transcriptional regulator n=1 Tax=Vibrio parahaemolyticus AQ3810 RepID=A6B1R6_VIBPA Length = 293 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 78/285 (27%), Positives = 129/285 (45%), Gaps = 26/285 (9%) Query: 8 KKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPT 67 K DLNL+ F + LS +KAA L +T A+S S++RL LF+++G+GI T Sbjct: 3 KTIDLNLIHTFLVVTDTLSYTKAAAQLGVTQPAISASIKRLEEASKKKLFVKNGRGIELT 62 Query: 68 TTGLNLHHHLEKNLRGLEQTINIVN----KSELKKNFIIYGPQLISCSNNSMLIRCLRQD 123 +TG L L INI+N KSE K F C++ S L+ Sbjct: 63 STGQEL-------LPKFFNAINIINDALSKSESLKVF---------CNDVS-----LQHL 101 Query: 124 SSVEIECHDILMSAENAE-ELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHP 182 +S++ + S ENA ELL +RKADL++ + SV+ ++ +IC HP Sbjct: 102 TSMDNVVLNETTSDENALCELLHNRKADLIVGNVTNNQTSVLVEEIYREPLVVICRKDHP 161 Query: 183 RITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTD 242 RI + + E+ L +++ ++ +I SS ++++++ Sbjct: 162 RIGNRMDIDTFYNEKHCVLAMNWDLDKEVESSLNITLKTSQIELITSSYFGVLSNVSHRY 221 Query: 243 LLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNL 287 LG+VP L + ++K P + K ++Y+K N L Sbjct: 222 CLGVVPLSLVINCGSAFDVKYFHSPFPNSTFKCQMAYHKRQANCL 266 >UniRef50_B9Z947 Transcriptional regulator, LysR family n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z947_9NEIS Length = 330 Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 66/253 (26%), Positives = 113/253 (44%), Gaps = 19/253 (7%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 L++ DLNLLV F+ + Q +S+AA L++ A+S +L RLR +DPLF+RSG + P Sbjct: 11 LRRLDLNLLVAFDALMQERHVSRAAARLFLGQPAMSHALARLRQLLDDPLFVRSGSRMEP 70 Query: 67 TTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQD 123 T L + L +Q + + + + F + P + LI LR+D Sbjct: 71 TPRACELAPQVRAWLEQAQQFLFRADAFDPAAAHATFRLAAPDGMEALLYPALIATLRRD 130 Query: 124 SSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLIC--SNRH 181 + + L+ + L H + DL+IT P+ R L ++ I S R Sbjct: 131 AP-GVRLRSQLLETDQQLAALDHDEVDLLITAAPLALRDWHSR-LRLFKSDFISVHSRRQ 188 Query: 182 PRITDNSTYEQIMAEE--FTQLISKSAGVDDIQMEIDERF----MNRKISFRGSSLLTII 235 + + +T + + + + +AGV +D F + R++ +SLL I Sbjct: 189 LPLPEPATLADLASCDHVVSSYRGTAAGV------VDHLFAAHGLERRVQVLSASLLAIG 242 Query: 236 NSIAVTDLLGIVP 248 + +A L+ I P Sbjct: 243 HIVAQAPLMSIQP 255 >UniRef50_B9JQ31 Transcriptional regulator n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JQ31_AGRRK Length = 296 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 70/279 (25%), Positives = 123/279 (44%), Gaps = 13/279 (4%) Query: 11 DLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTTG 70 DLNL+ F IY+ S+S AA L +T +VS +L RLR +D LF R+ G+ PT Sbjct: 3 DLNLIRAFIAIYETESVSGAAVKLNLTQPSVSHALSRLRDMLDDTLFTRTRDGMKPTFVA 62 Query: 71 LNLHHHLEKNLRGLEQTINIVNKSELKKNFIIYGPQLISCSNNS----MLIRCLRQDSSV 126 ++ L +E I + K + ++ + +L R ++ V Sbjct: 63 ERMYGIFRSALSEIETAIASRWSFDPKSSNQVFKLAFSDLGEMTFLPHILPRLSQEAPKV 122 Query: 127 EIECHDILMSAENAEELLVHRKADLVI---TQMPVISRSVICMPLHTIRNTLICSNRHPR 183 IE + + E ++ K D I T V SRS P+ R + S RHPR Sbjct: 123 GIEV--VELEVEKLDDWFATGKIDAAIFNSTSAKVQSRS---EPIFQERYVCLVSARHPR 177 Query: 184 ITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDL 243 I D + EQ ++E ++S +G ++ +I R++S R + + +A T+L Sbjct: 178 IRDQVSLEQYLSEGHI-VVSSHSGHRQVEDQIRAIGAARQVSLRLPHFTGLHDIVAKTEL 236 Query: 244 LGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKS 282 L +P + + +K + P+P ++ + + ++ Sbjct: 237 LATLPSRTAHMFASSGMVKYCTIPLPIPEFEVRLHWRET 275 >UniRef50_A8GKS5 Transcriptional regulator, LysR family n=1 Tax=Serratia proteamaculans 568 RepID=A8GKS5_SERP5 Length = 314 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 67/252 (26%), Positives = 113/252 (44%), Gaps = 11/252 (4%) Query: 6 DLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIA 65 +LK DLNLLV+F+ I++ S+ A + L I+ AVS +L RLR F+DP+F+R + Sbjct: 2 NLKNVDLNLLVVFDAIFRQRSVGLAGQMLGISQPAVSHALARLRQLFDDPMFVRINNEMR 61 Query: 66 PTTTGLNLHHHLEKNLRGLE----QTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 PT L +E+ L + Q + + + ++ + P + LI L Sbjct: 62 PTDRASELMPSVERVLSMIRDDVLQPVGF-DPAANRRTLTLCMPDIGEQYFLPPLINHLA 120 Query: 122 Q-DSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNR 180 Q + + H+ ++ EE L + DL I P + R+V + C+ R Sbjct: 121 QVAPGMAVVSHE--LAPAQLEEALESGRVDLAIGYFPDLRRAVFYQ-QRLFYSGFCCAVR 177 Query: 181 --HPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSI 238 HP+I + Q + E + + + + E+ + R + + S L++ I Sbjct: 178 QGHPQIGKTLSLPQFLQAEHVTARLRIRSQEIAEQAMREQGIVRNVKLQTSHFLSLTQII 237 Query: 239 AVTDLLGIVPYE 250 A TDLL V YE Sbjct: 238 AQTDLLATVTYE 249 >UniRef50_Q2S7V2 Transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S7V2_HAHCH Length = 310 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 74/295 (25%), Positives = 131/295 (44%), Gaps = 34/295 (11%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 + + DLNL V+F+ IY I++A+E L++T AVS +L RLR D LFIRS +G+ P Sbjct: 3 ISRIDLNLFVVFDAIYSEGGITRASEVLHLTQPAVSHALNRLRETLGDELFIRSSRGMTP 62 Query: 67 TTTGLNLHHHLEKNL----RGLEQTINIVNKSELKKNF---------IIYGPQLI-SCS- 111 T L + + L RGL Q ++L+ +F ++ P LI +C Sbjct: 63 TPYAHQLIGTVRQALNQLQRGLHQGQEFA-PAQLETSFRLCVRDLFDVLLLPALIKNCRA 121 Query: 112 -NNSMLIRCLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHT 170 ++ CLR S E HD+ + AD++I+ S+ L Sbjct: 122 IAPKVVFNCLR--SPREQILHDLASGR-------IDLAADVLISH----DDSICHEKLFE 168 Query: 171 IRNTLICSNRHPRITDNSTYEQIMAEEFTQLISK--SAGVDDIQMEIDERFMNRKISFRG 228 R T + HP + + +++ Q+ S+ G +DIQ+ + RK+ R Sbjct: 169 DRLTCLLRRDHPALASEWSLAEMLRWPHVQVSSREHGPGYEDIQL--SRHGLQRKLGLRT 226 Query: 229 SSLLTIINSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSS 283 + + A +DL+ P ++ + L+ + L ++ Y+ +++S+ Sbjct: 227 PNFYGAALTAANSDLILCAPEQVARKLTQTIPLQVMPFPLTLNPLETYLYWHRST 281 >UniRef50_Q0VLU8 Transcriptional regulator, LysR family n=2 Tax=Alcanivorax RepID=Q0VLU8_ALCBS Length = 310 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 67/285 (23%), Positives = 122/285 (42%), Gaps = 20/285 (7%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 + +FDLNL V+F+ IY S+++AA+ L +T AVS +L RLRA+ NDPLF+R G + P Sbjct: 3 VSRFDLNLFVVFDAIYTEGSLTRAAKVLNLTQPAVSHALARLRARLNDPLFVRQGSRMVP 62 Query: 67 TTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQ- 122 T + + L G ++ + + SE ++ F++ L +L + Q Sbjct: 63 TARARAMVSPVRHALGGFQRCLSEEGGFDASEAERTFVL---GLRDGLEARLLPALMSQF 119 Query: 123 -DSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRS-----VICMPLHTIRNTLI 176 D + I+ + +S L + DL M + + V+ PL ++ Sbjct: 120 MDEAPGIKLQSLTVSRRQMATELASGRLDLACDVMLALPEAIEHQVVLEGPL-----VVL 174 Query: 177 CSNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIIN 236 HP + +A + + S+ G + + R I R ++ Sbjct: 175 MRESHP-LAQGMDLPDYLAAQHVLVSSRREGPGLEDFGLARQGYRRHIRLRCQHYQAALS 233 Query: 237 SIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNK 281 ++ TDLL +P L D L LP +++++ +++ Sbjct: 234 TVQQTDLLLTMPASLAGQLSD-QGLVWKPFPGGLPGLEMHLYWHR 277 >UniRef50_B7VQ45 Transcriptional regulator n=8 Tax=Vibrionales RepID=B7VQ45_VIBSL Length = 311 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 74/286 (25%), Positives = 136/286 (47%), Gaps = 24/286 (8%) Query: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 M ++ L K D+NLL+ + + S+SK AE L+++ SAVS+ L +LRA F+DPLF R Sbjct: 1 MVDVKSLLKCDMNLLLCLHVLIEERSVSKTAERLFLSQSAVSKQLTKLRALFDDPLFERE 60 Query: 61 GKGIAPTTTGLNLHHHLEKNLRGLEQTI--NIVNKSELKKNFIIYGPQLISCSNNSMLIR 118 KG+ PT L L + + L +E+ + + + ++ F I L+ + ++ Sbjct: 61 SKGLFPTPKALALAPKIHQILLQIEKLTVPEVFDPKDSERTFTI---DLVETAYTAIYPH 117 Query: 119 CLRQ--DSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRS---VICMP-----L 168 + + I + S+++ + LL R+ D I + R+ V C+P + Sbjct: 118 FMPTALADAPHITINSSTWSSDSFKRLL-KREVDFGIGIFELDERASTHVQCIPDELDYV 176 Query: 169 HTIRNTLIC--SNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEI-DERFMNRKIS 225 + +C N HP + + + QL++ AG D + ME+ + + + + Sbjct: 177 ELCLDYSVCLMRNDHPALQEEWNLGTFLKYRHIQLVTGGAG-DWLLMEVLNSKQLEINKA 235 Query: 226 FRGSSLLTIINSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLP 271 S + + I +DLL P YNS RD+++ E+ ++ P+P Sbjct: 236 ANVSDITSAIKLCKQSDLLMCYP---YNSVRDYIDSGELVMK-PVP 277 >UniRef50_B7VJR0 Transcriptional regulator n=7 Tax=Vibrionaceae RepID=B7VJR0_VIBSL Length = 309 Score = 74.7 bits (182), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 71/270 (26%), Positives = 117/270 (43%), Gaps = 38/270 (14%) Query: 10 FDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTT 69 DLNLL F +YQ + KAAE L+++ AVSQ+LQ+LR FND LF++ G+ PT Sbjct: 9 LDLNLLRTFLIVYQEKNTRKAAERLFVSQPAVSQALQKLRHHFNDDLFVKVHGGLQPTAF 68 Query: 70 GLNLHHHLEKNLRGLEQTINIVNKSELKK-NF---IIYGPQLISCSNNSMLIRCLRQDSS 125 L + ++ + GL +N N + K+ ++ I P ++SC + S+ Sbjct: 69 SEQLTNQIKPFMDGLSIAVNTSNTFDPKEIDYTLKIALSPVVLSCLSGSLF--------- 119 Query: 126 VEIECHDILMSAENAEELLVHR--------KADLVITQMPVI----SRSVICMPLHTIRN 173 DI A NA+ LV + D V+ + + S+ V L + Sbjct: 120 -----KDIKAQAPNAKLKLVPWSNSSVSDIQKDEVLMGVSYLGEKTSKEVYTRQLIELTG 174 Query: 174 TLICSNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQME---IDERFMNRKISFRGSS 230 + HP D T + E L++ D+ + + + + +I FR Sbjct: 175 RIFVRKDHPLKQDTVTPNDMAGYEIASLVTPGWN-DNFSLASQILTDLSIEHRIGFRSEL 233 Query: 231 LLTIINSIAVTDLL----GIVPYELYNSYR 256 ++ II+ I TD+ + P E Y + R Sbjct: 234 VMAIIDVIQHTDMYMPHSNLFPVENYPTLR 263 >UniRef50_Q15TE0 Transcriptional regulator, LysR family n=4 Tax=Alteromonadales RepID=Q15TE0_PSEA6 Length = 307 Score = 74.7 bits (182), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 71/293 (24%), Positives = 137/293 (46%), Gaps = 35/293 (11%) Query: 9 KFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTT 68 K DLNL +I +YQ SI+ A + L+++ AVS +L RLR ++ DPLF+R G+ + T Sbjct: 7 KIDLNLFLILVAVYQEGSITGAGKRLHLSQPAVSHALSRLRDKYQDPLFVRHGRKMIATQ 66 Query: 69 TGLNLHHHLEKNLRGLEQTINIVN-------KSELKKNF-----IIYGPQLIS--CSNNS 114 + + ++ LE T++ + + E+K F I+ P+L + +N Sbjct: 67 LCQTIMPRVLSSVAELESTLHDIGDFDVHQYQREMKFGFRDILESIFFPELATDLMANTP 126 Query: 115 MLIRCLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQM-PV---ISRSVICMPLHT 170 + RQ S +++E +A ++ L D+VI + P I ++IC Sbjct: 127 NITVHSRQVSRLDME------AALESQAL------DIVIDVLTPTSNDIHHTLIC----D 170 Query: 171 IRNTLICSNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSS 230 +LIC HP ++D S I AE + K + V+ + M + + + RK + + Sbjct: 171 EHFSLICRKGHPILSDMSLANYIKAEH-ALVTFKDSAVNTVDMALAKHAVARKFALKCEH 229 Query: 231 LLTIINSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSS 283 + I+ D+L +P + + ++ + L +P + +++ ++K + Sbjct: 230 YFAATSVISRCDMLLTMPNAYARLLKQQMPVEVVPLPFEVPILPVHMYWHKQA 282 >UniRef50_Q13QG3 Transcriptional regulator, LysR family n=9 Tax=Proteobacteria RepID=Q13QG3_BURXL Length = 316 Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 67/281 (23%), Positives = 118/281 (41%), Gaps = 26/281 (9%) Query: 11 DLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTTG 70 DLNLL +F I S++ A E L +T AVS +L+RLRA F+DPLF+R+ G+ PT Sbjct: 10 DLNLLRVFLAISDLRSLTAAGERLGLTQPAVSHALRRLRALFDDPLFVRTPTGMVPTDAA 69 Query: 71 LNLHHHLEKNL--------------RGLEQTINIVNKSELKKNFIIYGPQLISCSNNSML 116 L LH L + Q + V+ S++ + + + P L+ SML Sbjct: 70 LRLHAPLTQAFGIINVAVQQIARFDPATAQRVFRVSMSDMSEFYFL--PPLL-----SML 122 Query: 117 IRCLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLI 176 R R + +E ++ S ++ + + DL + +P + + L + + Sbjct: 123 DRSAR---GIRLEIANV--SVDSVSSAMRSGEIDLALGYVPGLDTGCVSKTLFVDEHVCV 177 Query: 177 CSNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIIN 236 HP T E + + + + G ++ ++E + R I R + Sbjct: 178 VRAGHPLRKQKPTKEDLANLRYVYASTNATGHRMVEQWLEELNLRRDIVLRLPHFVVAPE 237 Query: 237 SIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYI 277 + TDL I P + + + + L LP I++ + Sbjct: 238 IVQHTDLAMIFPRSIAQRFNRNKAFRILPLPFALPPIEIQV 278 >UniRef50_B4S2V4 Transcriptional regulator, LysR family protein n=2 Tax=Alteromonas macleodii RepID=B4S2V4_ALTMD Length = 311 Score = 74.3 bits (181), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 70/283 (24%), Positives = 139/283 (49%), Gaps = 20/283 (7%) Query: 8 KKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPT 67 +K DLNLL +FE ++QH ++++ AE+L+ITPSAVS +++R R DPLF++ + + PT Sbjct: 12 EKLDLNLLKVFEALWQHRNMTRVAEALHITPSAVSHAMRRFRDILGDPLFVKEKQSMLPT 71 Query: 68 TTGLNLHHHLEKNLRGLEQTIN-IVNKSEL--KKNFIIYGPQLISCSNNSMLIRCL-RQD 123 L + K L + + + V+ L + F+I + + L+ L +Q Sbjct: 72 AACERLAPAILKALNDIRKALGEFVDFDPLHSHQRFVIAMQESLELGVLPALLSTLEKQA 131 Query: 124 SSVEI---ECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTI--RNTL-IC 177 ++EI H + A+ L +R LVI I R+V H++ R+T + Sbjct: 132 PNIEIVSTRLHRDTILAD-----LTNRNLHLVID----IGRAVAAPISHSLLRRDTYKVL 182 Query: 178 SNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINS 237 N+ + + ++ +A + +++ G ++ + + ++R +R + + Sbjct: 183 MNKQNPLAQSLDKKRYVAARHITVSNRAKGASVEEIALQQLGVSRPSLWRCQNYRAAADV 242 Query: 238 IAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYN 280 +A TD L +P + ++ D NL KL + LP ++ ++ ++ Sbjct: 243 VANTDALLTLPGSVADAVNDD-NLISTKLPYQLPELETHLYWH 284 >UniRef50_D0RZK6 Transcriptional regulator n=1 Tax=Acinetobacter calcoaceticus RUH2202 RepID=D0RZK6_ACICA Length = 303 Score = 74.3 bits (181), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 42/117 (35%), Positives = 64/117 (54%), Gaps = 7/117 (5%) Query: 10 FDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTT 69 FDLNLL++F +YQH +++KAAE+L+I+PSA S +L RLR DPLF+R + PT Sbjct: 11 FDLNLLLVFNALYQHKNVAKAAETLFISPSAFSHALNRLRDTLQDPLFVRMNGEMKPTKK 70 Query: 70 GLNLHHHLEKNLRGLEQTINIVNKSEL-----KKNFIIYGPQLISCSNNSMLIRCLR 121 + + L L Q N+ S+ F+I + + S +L++ LR Sbjct: 71 SEEIAPSISNCLSTLSQ--NLFKNSDFDYATSDYEFVIAATEYTAFSVMPLLVKHLR 125 >UniRef50_C2LG43 LysR-family transcriptional regulator n=4 Tax=Enterobacteriaceae RepID=C2LG43_PROMI Length = 323 Score = 74.3 bits (181), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 45/109 (41%), Positives = 63/109 (57%), Gaps = 17/109 (15%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 L + DLNLLVIF+ + Q S++ AA+ L I+PSAVS++L +LR F+DPLFIRS +G+ P Sbjct: 6 LHRIDLNLLVIFQILLQERSVTLAAKWLSISPSAVSKALAKLRIWFDDPLFIRSPQGLIP 65 Query: 67 TTTGL----------NLHHHLEKNLRGLEQTINIVNKSELKKNFIIYGP 105 T L N+ HH+ N R E + LK N ++ P Sbjct: 66 TPLSLSIEDSLSDFINISHHI-ANKRNTEVPVG------LKFNLVLETP 107 >UniRef50_A3YHF6 Transcriptional regulatory protein n=2 Tax=Gammaproteobacteria RepID=A3YHF6_9GAMM Length = 308 Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 80/286 (27%), Positives = 135/286 (47%), Gaps = 24/286 (8%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 + K DLNL+VIF+ I + SI+ AA+SL +T +VS ++ R+R + DPLF++ G+GI P Sbjct: 1 MAKTDLNLVVIFDAIMKEKSITSAADSLAMTQPSVSNAVSRMRHAWKDPLFVKEGRGIRP 60 Query: 67 TTTGLNLHHHLEKNLRGLEQTI--NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDS 124 T L + + L + I + K +F I I+ + S++ LR Sbjct: 61 TPYATKLWKRVAEPLAQINHAIAPEYFDPLTSKASFRIG----ITDGSASIVWPELRH-- 114 Query: 125 SVEIECHDILMSA----ENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNR 180 +E E +I + A + E LL + DLV S + ++ + + Sbjct: 115 IIEQEAPNINIYAVPYKVDGELLLNNADVDLVFDYYDGNSDEIFYKSMYENQFVTVMRAD 174 Query: 181 HPRITDNSTYEQIMAEEFTQLISKSAG----VDDIQMEIDERFMNRKISFRGSSLLTIIN 236 H + T E+ + E L+S S VDD E++ + R+ + +S + IN Sbjct: 175 HELANEELTLERYIKSEHL-LVSLSGDVCGIVDDKLAELNAK---RRTAMTVNSFASAIN 230 Query: 237 SIAVTDLLGIVPYELYNSY--RDFLNLKEIKLEHPLPSIKLYISYN 280 I T L+ +PY + + L LK + LE LPSIK+ ++++ Sbjct: 231 LIKQTRLIITMPYPIIAEHLAAGDLVLKPVPLE--LPSIKISLAWH 274 >UniRef50_Q13JD9 Transcriptional regulator, LysR family n=1 Tax=Burkholderia xenovorans LB400 RepID=Q13JD9_BURXL Length = 305 Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 66/266 (24%), Positives = 120/266 (45%), Gaps = 11/266 (4%) Query: 11 DLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTTG 70 DLNL+ F IY+ S+S AA L +T VS +L RLR +DPLF R+ +G+APT Sbjct: 12 DLNLIRAFVAIYETGSVSAAARRLNLTQPTVSYALSRLRTLLHDPLFSRTREGMAPTFNA 71 Query: 71 LNLHHHLEKNLRGLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCLR--QDSSVEI 128 L+ + L +E I + + + L L R + Q ++ + Sbjct: 72 SQLYETFRQALDRIEGAIAATRYFDAATSTRCFRIALSDLGELYFLPRMVERLQRTAPGV 131 Query: 129 ECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRI-TDN 187 E + + E E L + D + + ++ L + + + S+RHP I T Sbjct: 132 ELEVVQLDVERTAEWLNTGQIDAAVGNLHLVGGKARRRYLFSETYSCLVSHRHPWIGTTL 191 Query: 188 STYEQIMAEEFTQLISKSAG---VDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLL 244 S + + A+ + S+G V+D+ + ++RKI+ R +++ +A +DL+ Sbjct: 192 SLGDYVRAKHVVG--ASSSGHRLVEDVMTGMG---LSRKIALRVPHFTNVVDVVAGSDLV 246 Query: 245 GIVPYELYNSYRDFLNLKEIKLEHPL 270 +P + N Y+ ++ + L P+ Sbjct: 247 LTLPARVANVYQSTGTVRALPLPVPV 272 >UniRef50_A0JW61 Transcriptional regulator, LysR family n=1 Tax=Arthrobacter sp. FB24 RepID=A0JW61_ARTS2 Length = 295 Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 68/303 (22%), Positives = 126/303 (41%), Gaps = 18/303 (5%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 + DLNL+ F IY+ S+++ A + IT +VS +L RLR Q DPLF R G+ P Sbjct: 1 MADLDLNLVKTFVSIYETRSLTQTAAEMCITQPSVSHALSRLRRQLGDPLFTRGAGGMTP 60 Query: 67 TTTGLNLHHHLEKNLRGLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQ--DS 124 T + L + +L ++ I+ + + + L + L +++ DS Sbjct: 61 TRVAVELFSTFKASLNAIDLAIDGTRDFDPTTSSRTFRLCLSDLGEMAFLPALMKRLLDS 120 Query: 125 SVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRI 184 + +I + M + E L H D I +P+ IR+ +I + + Sbjct: 121 APQIVLEVVPMQIDKVSEWLAHGAVDAAIASVPIGG---------AIRSRVIDQEHYVCV 171 Query: 185 TDNST---YEQIMAEEFTQL----ISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINS 237 + E++ +FT + I SAG + EI + R I+ R + Sbjct: 172 LPDGAGGLAEKMTLSQFTGMRHVVIDPSAGHHLAEAEIAALGIERNIALRLHHFSVLPLV 231 Query: 238 IAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLN 297 +A +L IVP + + + L +L +PS + + +N ++ + F + + Sbjct: 232 LAGQNLAAIVPSRVARMFTEQAPLTIRELPFNVPSFDVSLYWNGTAPRSRALRWFHETVA 291 Query: 298 ESF 300 +S Sbjct: 292 DSL 294 >UniRef50_A7HRT9 Transcriptional regulator, LysR family n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HRT9_PARL1 Length = 315 Score = 73.9 bits (180), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 78/287 (27%), Positives = 128/287 (44%), Gaps = 15/287 (5%) Query: 6 DLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIA 65 ++++ DLNLL++F IY SISKAA L IT AVS +L+RLR D LF +SG G+A Sbjct: 2 NIRELDLNLLLVFNAIYTERSISKAAVKLGITQPAVSNALRRLRNFTGDTLFYKSGSGVA 61 Query: 66 PT----TTGLNLHHHLEKNLRGLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 PT T + + H L+ RGL ++ + + ++ F I +I + L+ R Sbjct: 62 PTRAAATLAIPIGHALDTVERGL-SSVRSFDPATSRRTFRIGVNDIIHDALVPALVGYTR 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 +++ I + + A E+L + D+ + I S++ + +I + H Sbjct: 121 REAPNLI-LEFVQQVGDRALEMLKGGEIDMALLPNFAIDDSLVSTKVWDDSFAIIVARNH 179 Query: 182 PRITDNS-TYEQIMAEEFTQLISKSAGVDDIQMEIDERF----MNRKISFRGSSLLTIIN 236 P N T + I F + V ++ ID F M R + + I Sbjct: 180 PIAKSNRLTVDDIRELRFVV----TTHVQRLRTFIDSAFRANGMERVTACAVADTHNIYP 235 Query: 237 SIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSS 283 +AV+DL V + Y +L L LP I+ I++ K + Sbjct: 236 LVAVSDLAACVGRFHADRYNTDGSLVMFDLPFELPKIQGRIAWAKEA 282 >UniRef50_A5V6I2 Transcriptional regulator, LysR family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V6I2_SPHWW Length = 301 Score = 73.9 bits (180), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 72/281 (25%), Positives = 122/281 (43%), Gaps = 12/281 (4%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 + DLNLLV F+ + +H S+S AAE+++++ SA+S +L RLRA F+D L + G+ + Sbjct: 3 FQGLDLNLLVAFDTLAEHRSVSLAAEAMHLSQSAMSAALARLRAYFDDELLVPRGRTLVL 62 Query: 67 TTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQD 123 T L + L + TI + E K+ F I + +R Sbjct: 63 TPRAEQLAPEVRDTLLRIHATIAHPAAFDPIETKREFTIVASDYVQAVLLEPFMRKAAHH 122 Query: 124 SSVEIECHDILMSAENAEELLVHRKA--DLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 + + + +S + +E ++ DL+I VI L LICS H Sbjct: 123 AP-GMRFRILPISQQGIDEF---KRGVIDLIIVADSVILPEHPSQKLFEDEAKLICSADH 178 Query: 182 PRITDNSTYEQI--MAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIA 239 P I D + EQ + T L G + + ER + R+I + + + ++ Sbjct: 179 PTIGDEISMEQFGTVGHVTTSLHHHRPG-SLFDLMLLERSIARRIEIQVPAFSMMAGAVV 237 Query: 240 VTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYN 280 T+ + I+ L SY L +K + L LP I+ I ++ Sbjct: 238 GTERVAILHARLATSYARILPIKLLSLPFALPPIREVIQWH 278 >UniRef50_A4GJC2 Transcriptional regulator LysR family protein n=1 Tax=uncultured marine bacterium EB0_49D07 RepID=A4GJC2_9BACT Length = 303 Score = 73.9 bits (180), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 35/83 (42%), Positives = 54/83 (65%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 + FDLNL VI IY S++KAAE + IT AVS +L RLR +F+D LF+R+G G+ P Sbjct: 3 ISSFDLNLFVIMNSIYTEGSLTKAAEVVGITQPAVSNALSRLREKFDDELFVRTGSGMVP 62 Query: 67 TTTGLNLHHHLEKNLRGLEQTIN 89 T N+ ++ L+ +++++N Sbjct: 63 TQKTENIIQDIQNALQLMQKSVN 85 >UniRef50_Q2G901 Transcriptional regulator, LysR family n=2 Tax=Alphaproteobacteria RepID=Q2G901_NOVAD Length = 302 Score = 73.9 bits (180), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 51/158 (32%), Positives = 83/158 (52%), Gaps = 7/158 (4%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 K DLNLLV+F+ + + S+++AAE + +T A S +L+RLR F D + + GK + P Sbjct: 3 FKGLDLNLLVVFDALMETRSVTRAAERIGLTQPATSAALRRLRDYFRDEIVVAVGKRMHP 62 Query: 67 TTTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLI-RCLRQ 122 T LH +++ LR +E+ I++ + S + F I G I + LI R R Sbjct: 63 TPFAEALHPQIQQALRRVERAISMPTEFDPSTSTRRFRIIGSDYIMVAVLVPLIERFART 122 Query: 123 DSSVEIECHDILMSAENAEELLVHRKADLVITQMPVIS 160 V IE I+ E++ L +ADL++T P ++ Sbjct: 123 APGVRIE---IIQPNEHSVAELEAGRADLLVTPEPFLA 157 >UniRef50_B2JSH4 Transcriptional regulator, LysR family n=2 Tax=Burkholderiaceae RepID=B2JSH4_BURP8 Length = 309 Score = 73.9 bits (180), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 72/293 (24%), Positives = 134/293 (45%), Gaps = 23/293 (7%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 + FDLNLL IF+ +++H + KAAE L ++ A S +L+RLR + D LF+++G G+ P Sbjct: 8 MDNFDLNLLRIFDALWRHGHLGKAAEELTLSQPAASYALKRLREELGDVLFVKTGSGMQP 67 Query: 67 TTTGLNLHHHLEKNLRGLEQTI----NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQ 122 T + L ++ L + + + N V + ++ F I L L R L++ Sbjct: 68 TPRAILLAPVVQSVLADIRERVLKAPNFV-PDKAQRTFTI---ALSDVGEMVSLPRLLQR 123 Query: 123 DSSVEIECHDILMSAENAEEL--LVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNR 180 +S+ + +S + L L + DL I P + V H +R++ +C R Sbjct: 124 VTSLAPSVNVTTVSFAPKQLLSSLQRSEVDLAIGYFPDLD-GVDVFQQHLVRHSFVCLVR 182 Query: 181 --HPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMN-----RKISFRGSSLLT 233 HP + T + F +L V+ + EI E+F+ R+ L+ Sbjct: 183 QNHPAVQGRLT-----KKLFCELPHAVVQVEGRRQEIVEQFLKENGIRRREVLHTPHFLS 237 Query: 234 IINSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNN 286 I +IA+TDL+ V ++ + L+ + + +P + +++S ++ Sbjct: 238 IPMTIAMTDLVVTVSSDVGEIFARIAELEILDPPYKMPRFDVNQYWHRSQHDD 290 >UniRef50_C7RKX8 Transcriptional regulator, LysR family n=20 Tax=Proteobacteria RepID=C7RKX8_9PROT Length = 310 Score = 73.9 bits (180), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 49/160 (30%), Positives = 80/160 (50%), Gaps = 26/160 (16%) Query: 11 DLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTTG 70 DLNLLV + + S+++AA+ L ++PSA+S++L RLRA DPL +R+G+G+ PT Sbjct: 5 DLNLLVTLDVLLAEGSVARAAQRLRLSPSAMSRALARLRATTGDPLLVRAGRGLVPTPRA 64 Query: 71 LNLHHHLEKNLRGLEQTINIVNKSELKKNFIIY------------GPQLIS-CSNNSMLI 117 L L + ++ E + V K +L++ +Y GP LI+ + + + Sbjct: 65 LELREQVGPLVQAAEAALRPVEKLDLERLVRMYTLRTSEGFVENFGPDLIARVAEQAPGV 124 Query: 118 R-CLRQ----------DSSVEIECHDILMSAENAEELLVH 146 R C Q D SV++E ++ A EL V Sbjct: 125 RLCFVQKSNKNSAPLRDGSVDLETG--VVGKATAPELRVQ 162 >UniRef50_A3YI62 Transcriptional regulator, LysR family protein n=2 Tax=Oceanospirillaceae RepID=A3YI62_9GAMM Length = 305 Score = 73.6 bits (179), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 33/83 (39%), Positives = 56/83 (67%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 L++FDLNLL+IFE + +S+AAE ++++ SA+S +L RLR Q +DPL +++ G+ P Sbjct: 4 LRQFDLNLLIIFEALISECHVSRAAEKVFLSQSAMSHALNRLRTQLDDPLLVKTENGLTP 63 Query: 67 TTTGLNLHHHLEKNLRGLEQTIN 89 T L + + + L +E+TI+ Sbjct: 64 TPRALAMLPDVRQALNLVERTIS 86 >UniRef50_Q0BYJ0 Transcriptional regulator, LysR family n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0BYJ0_HYPNA Length = 297 Score = 73.6 bits (179), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 32/63 (50%), Positives = 44/63 (69%) Query: 6 DLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIA 65 +L+ DLNLL + E IY S+++A+E L+IT AVS +L RLR F DPLF+R G+G+ Sbjct: 2 NLRSLDLNLLPVLEAIYAERSLTRASEVLHITQPAVSNALSRLRLHFEDPLFVREGRGVK 61 Query: 66 PTT 68 PT Sbjct: 62 PTA 64 >UniRef50_A0LD88 Transcriptional regulator, LysR family n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LD88_MAGSM Length = 312 Score = 73.2 bits (178), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 63/279 (22%), Positives = 120/279 (43%), Gaps = 4/279 (1%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 L KFDLNLLV F+ + +++A L IT +A+S +L+RLR F+DPLFI++G + P Sbjct: 9 LNKFDLNLLVAFDALMSERGVTRAGRRLGITQAAMSNTLRRLRTAFDDPLFIKTGARMEP 68 Query: 67 TTTGLNLHHHLEKNLRGLEQTINIVNKS-ELKKNFIIYGPQLISCSNNSMLIRCLRQDSS 125 T + L +E L+ + ++ N S + + ++ ++ + + L Sbjct: 69 TPRAMELSGMIEAALKQVHVALD--NDSFDPANSHYVFRVGMVDYTVPLVFPALLDHLEK 126 Query: 126 VEIEC-HDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRI 184 C +++ + + E+L + DLV++++ R + + I I HP I Sbjct: 127 YAPNCILEVVNTGDFEGEMLESGEVDLVLSRLDQAPRGLKSRVVGEIPFVCIYRPGHPLI 186 Query: 185 TDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLL 244 + T EQ + + + + R + R S + +A TDL+ Sbjct: 187 KEPMTLEQYLQARHVHYYPPMVKEGLVDLGLKAINQERNVVVRLDSFGMVPTLVAETDLI 246 Query: 245 GIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSS 283 V + + + LK L P ++ + ++ S Sbjct: 247 AAVTHTSAHVIAPAMGLKVQPLPFEAPPLQFVMVWHDRS 285 >UniRef50_Q47ZN8 Transcriptional regulator, LysR family n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47ZN8_COLP3 Length = 312 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 64/247 (25%), Positives = 116/247 (46%), Gaps = 6/247 (2%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 L+ DLNLL IF + +IS AAE+L +T AVSQ+L+RLR+ +NDPLF R + P Sbjct: 5 LRNVDLNLLSIFTALMHEKNISHAAENLGMTQPAVSQALKRLRSLYNDPLFERKSGKMMP 64 Query: 67 TTTGLNLHHHLEKNLRGLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSV 126 T ++ + K L + T+ + + + ++ NN L + ++ + V Sbjct: 65 TLKADEIYPIINKILADVSSTLPDTGDFLPETANLNFHINILGVGNNDFLTKLSQRLAHV 124 Query: 127 EIECHDILMSAE---NAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHP- 182 + +S E +AE+ L ++ DL + + + L + +I HP Sbjct: 125 APNI-SLTVSTEMLVDAEKSLRDKEYDLHLDYLTIDEIGCHHQELFNDQLFIIARKGHPN 183 Query: 183 -RITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVT 241 N + +AE+ L + V + + + + NR+I + +S+ I+ ++ T Sbjct: 184 LNNKTNLLLSEYLAEKHAVLAPRKGNVYPLSLALQDFSYNREIKYTSTSIENILEIVSAT 243 Query: 242 DLLGIVP 248 DL+ I+P Sbjct: 244 DLICIMP 250 >UniRef50_A6CVD4 Transcriptional regulator, LysR family protein n=1 Tax=Vibrio shilonii AK1 RepID=A6CVD4_9VIBR Length = 325 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 67/243 (27%), Positives = 114/243 (46%), Gaps = 14/243 (5%) Query: 11 DLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTTG 70 DLNLL +F+ +Y+ ++ KAAE LY++ AVSQSLQ+LR QF+DPLF++ G+APT Sbjct: 10 DLNLLRVFKVLYEEKNMRKAAERLYVSQPAVSQSLQKLRHQFDDPLFVKVKSGLAPTPFS 69 Query: 71 LNLHHHLEKNLRGLEQTIN---IVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSS-- 125 L L L +E +N + + ++L ++ I S + L R R+ + Sbjct: 70 EQLSSSLLPLLYDIENVVNDSDVFDPAQLDQDITIALSSSFVFSISGELYRYFREHAPGL 129 Query: 126 -VEI-ECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPR 183 + I +D ++A E+L+ A+L P + + I I L+ HP Sbjct: 130 RIHIASWNDQTVTAIEKGEILLGINAELT-DSYPFMEKRTIG----EINACLLVRKEHPI 184 Query: 184 ITDNSTYEQIMAEEFTQLI-SKSAGVDDIQMEIDERF-MNRKISFRGSSLLTIINSIAVT 241 T E + +LI S + +EI +R ++ F + +I+ + + Sbjct: 185 TKKKVTVESMSKYPLARLIVSNYSKYTSPTVEIFKRLGYPLEVGFSSEYPVALIDVVQQS 244 Query: 242 DLL 244 D+ Sbjct: 245 DMF 247 >UniRef50_Q0ARX0 Transcriptional regulator, LysR family n=1 Tax=Maricaulis maris MCS10 RepID=Q0ARX0_MARMM Length = 334 Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 66/264 (25%), Positives = 122/264 (46%), Gaps = 34/264 (12%) Query: 3 NLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGK 62 +L LK DLNLL+ F+ ++ ++++AA L ++ VS +L RLR F D LF+R+ + Sbjct: 2 SLMSLKHVDLNLLITFDALWHERNVTRAARRLNVSQPTVSNALSRLRLAFGDQLFLRAPR 61 Query: 63 GIAPTTTGLNLHHHLEKNLRGLEQTIN---IVNKSELKKNF---------IIYGPQLIS- 109 GI PT + + + LR +EQ ++ + + ++ F + P L++ Sbjct: 62 GIEPTERCSEIIKDVREALRHIEQALDSGPAFDAKQCRREFHIGCADYFDLFVLPDLLAY 121 Query: 110 -CSNNSMLIRCLRQDSSVEI-ECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMP 167 + M+ LR SV+I E D+L + E + ++H + P R + Sbjct: 122 MAEHAPMIDLRLR---SVDIEEGMDLLDAGEL--DFMMH-------MEFPAAKRFGVRPV 169 Query: 168 LHTIRNTLICSNRHPRI---TDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKI 224 LH R+ HP + D +T+ + F+Q + VD++ + R R++ Sbjct: 170 LHE-RHVFATRAGHPLVREAPDIATFASLSHVNFSQRGDSESPVDEVLARLGYR---RRV 225 Query: 225 SFRGSSLLTIINSIAVTDLLGIVP 248 + + T+ + + TDL+ VP Sbjct: 226 AITTQHMTTVAHLVKTTDLVASVP 249 >UniRef50_A8KZI9 Transcriptional regulator, LysR family n=4 Tax=Actinomycetales RepID=A8KZI9_FRASN Length = 310 Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 65/275 (23%), Positives = 115/275 (41%), Gaps = 7/275 (2%) Query: 10 FDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTT 69 DLNLLV + + + S++ AA L +T SAVS++L RLR +DP+ +R+G + PT Sbjct: 10 LDLNLLVALDALLEERSVNAAARRLRLTESAVSRALGRLRRAMDDPVLVRAGHRMVPTPR 69 Query: 70 GLNLH---HHLEKNLRGLEQTINIVNKSELKKNFIIYGPQLISCS-NNSMLIRCLRQDSS 125 L + H L + + I + + L + F I ++ + +L R R Sbjct: 70 ALAVQAEVHALVERAHAVFTPIREPDLATLARTFTILASDALTTAIGVDLLDRLTRDAPG 129 Query: 126 VEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRIT 185 V + L ++ L ADL I + S + L + + HP Sbjct: 130 VRVR---FLPEPSATDDPLRDGTADLEIGDIDSTSPEIHIEVLGEEQALAVVRAGHPLTR 186 Query: 186 DNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLG 245 T E++ A + + + R + R ++ S + +A +DL+G Sbjct: 187 GRLTPERLAAARHVTASRRGRFAGPLDEVLAARGLRRTVAVSVPSHSAALLLVAGSDLVG 246 Query: 246 IVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYN 280 +VP L D L L + L LP++ + +++ Sbjct: 247 LVPARLGRGLLDSLGLVALDLGLDLPTLTIAQAWH 281 >UniRef50_Q081K6 Transcriptional regulator, LysR family n=2 Tax=Alteromonadales RepID=Q081K6_SHEFN Length = 326 Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 36/89 (40%), Positives = 55/89 (61%) Query: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 MA+ +++ DLNLL IFE +Y +++ A++SL+ITPSAVS +++RLR NDPLF+R Sbjct: 19 MADTKAIQQLDLNLLKIFEALYSEQNMTLASKSLFITPSAVSHAIKRLRLVLNDPLFVRQ 78 Query: 61 GKGIAPTTTGLNLHHHLEKNLRGLEQTIN 89 G + PT + L L + Q + Sbjct: 79 GLQMQPTAACQRMAPQLISALNRIRQVLQ 107 >UniRef50_C4U6X1 LysR-family transcriptional regulatory protein n=1 Tax=Yersinia aldovae ATCC 35236 RepID=C4U6X1_YERAL Length = 301 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 77/299 (25%), Positives = 131/299 (43%), Gaps = 26/299 (8%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 +KKFD NL+ + +C+ + S+++ AE L + S VS L RLR +FND + I + +G+ P Sbjct: 1 MKKFDYNLVKLLQCLIEFRSVTRTAEELDVAISTVSHGLARLRREFNDRIVINTKEGLIP 60 Query: 67 TTTGLNLHHHLEKNLRGLEQTINIVNKSELKK-NFIIYGPQLI----SCSNNSMLIRCLR 121 TT + L++H ++ I S+ K+ + I LI SC I L Sbjct: 61 TTLAIALNNHFSPAADLIDNAIIAGKNSDSKQTSLTISASPLIQHWLSCQ-----IYALS 115 Query: 122 QDSSVE----IECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLIC 177 Q + I+ D E L + + D+ I + I RS++ L + ++ Sbjct: 116 QSDDISNNFTIKYVDSYYVNEQRVSRLRNSEVDIDIGSILNIDRSLVSYHLGSFPLGILL 175 Query: 178 SNRHPRITDNSTYEQIMAEE--FTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTII 235 SN H RI + + + E+ + + A D N K + +S L + Sbjct: 176 SNSHSRILGDVGKDDWLQEQRLIWNINMQGASFAPGNTFNDIHIGNNKATIETTSSLNAV 235 Query: 236 NSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLP-----SIKLYI-SYNKSSLNNLV 288 +A TD L I P+ + + N++ PLP + LY ++ KS N+L+ Sbjct: 236 TLVANTDYLVIFPFMMQSFLAKQFNVR----ISPLPFANDGVVSLYAYTHKKSDSNDLI 290 >UniRef50_A0LD87 Transcriptional regulator, LysR family n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LD87_MAGSM Length = 322 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 63/284 (22%), Positives = 128/284 (45%), Gaps = 14/284 (4%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 ++L KFDLNLLV F+ + +++A +L IT +A+S +L+RLR F+DPLF+++G + Sbjct: 8 HNLNKFDLNLLVAFDTLMTERGVTRAGRALGITQAAMSNTLRRLRELFDDPLFVKTGSSM 67 Query: 65 APTTTGLNLHHHLEKNLRGLEQTINIVNKSEL--KKNFIIYGPQLISCSNNSMLIRCLRQ 122 PT + L + L + + +N + +NF + +I ++ ++ +R Sbjct: 68 EPTPRAIELSTPVALALEEVRKALNQEGFDPMMASENFRL---GMIDYASAMLMPGLVRH 124 Query: 123 DSSVEIECHDILMSAENAEEL--LVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNR 180 S V ++ EE+ L DLV ++ + V L ++ + Sbjct: 125 MSQVAPRAKMQVVDVGGDEEVANLERGAVDLVFSRFQWVPPKVCINRLFSMEYVAVFCPN 184 Query: 181 HPRITDNS-TYEQIMAEEFTQLISKSAG---VDDIQMEIDERFMNRKISFRGSSLLTIIN 236 HP + S + + +A + VD+ E+ E+ R I + +S + Sbjct: 185 HPGVEGGSLSMDAFLASRHVHYYPRGMDNTVVDETLAEMGEK---RNIIGKLASFGMLPA 241 Query: 237 SIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYN 280 +A + ++ ++P L L+ KL P +++ ++++ Sbjct: 242 MLASSHVMAVMPEGAAKVVARPLGLRVEKLPFKTPLLRMALAWH 285 >UniRef50_B7RWY7 LysR substrate binding domain protein n=2 Tax=unclassified Gammaproteobacteria (miscellaneous) RepID=B7RWY7_9GAMM Length = 327 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 37/87 (42%), Positives = 55/87 (63%) Query: 3 NLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGK 62 N +L K DLNLL+ + + + ++S+AAE L+IT A+S++L RLRA F+D LF RS Sbjct: 2 NTKELAKIDLNLLISLQVLLEERNVSRAAERLFITQPAMSKTLSRLRAVFDDALFTRSSH 61 Query: 63 GIAPTTTGLNLHHHLEKNLRGLEQTIN 89 G+ PT L L L + L G+ Q ++ Sbjct: 62 GMQPTPRALELTDRLTEILSGIGQLVS 88 >UniRef50_B9J825 Nod transcriptional regulator protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9J825_AGRRK Length = 333 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 35/88 (39%), Positives = 54/88 (61%) Query: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 M N L+K DLNLL+ F + Q ++S+AAE L + +S +L+RLR +D LF+R Sbjct: 3 MMNDAALRKIDLNLLLAFSVLMQERNVSRAAERLLLGQPGLSAALRRLRETLDDELFVRV 62 Query: 61 GKGIAPTTTGLNLHHHLEKNLRGLEQTI 88 G+G+ PT L++ +E L G+E+ I Sbjct: 63 GRGLQPTARALSIAPAIEDALSGIERAI 90 >UniRef50_Q1YVH2 Transcriptional regulator, LysR family protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YVH2_9GAMM Length = 324 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 73/265 (27%), Positives = 117/265 (44%), Gaps = 35/265 (13%) Query: 3 NLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGK 62 NL L + DLNLLV + + + S+++AA+ L+IT A+S+ LQRLR Q +DPLF R+G Sbjct: 2 NLQKLSRLDLNLLVALQALLEEKSVTRAAQRLFITQPAMSRVLQRLRQQLDDPLFTRTGN 61 Query: 63 GIAPTTTGLNLHHHLEKNLRGLEQTINIVNKSELKK-----NFIIYGPQLISCSNNSMLI 117 + PT L L L G+ +++V E I P+ I+ S S L Sbjct: 62 ILIPTPKAQELQLRLPMLLDGI---LDMVTDGEFDPATYVGEITIAIPEFIAISLASQLT 118 Query: 118 RCLRQDSS---VEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNT 174 L + + + I ++ E ++ +L D I I+ V L + Sbjct: 119 ALLNKYAPGVILSISSETDSVAGELSDGVL-----DFAIDIKREITAEVTARHLSIFSPS 173 Query: 175 LICSNRHPRITDNS-TYEQIMAEEFTQ---LISKSAGVDDIQMEIDERFMNRKISFRGSS 230 + HP N T ++I+ + Q LI+K + D RF +R + +G S Sbjct: 174 IWMREGHPLAKKNRVTLDEILQYPYVQYYLLIAKR-----VSARTDARF-DRALRKQGRS 227 Query: 231 ---------LLTIINSIAVTDLLGI 246 L+T I +I +D L + Sbjct: 228 RSKAMVTNQLMTAIETICASDCLMV 252 >UniRef50_D0ZGN3 Transcriptional regulator n=2 Tax=Edwardsiella RepID=D0ZGN3_EDWTE Length = 310 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 74/301 (24%), Positives = 140/301 (46%), Gaps = 33/301 (10%) Query: 11 DLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTTG 70 D++++ F + S++ AAE L + +++S++L+++R FNDPLFIR+ +G+ PT Sbjct: 18 DVSVIRTFLTVMDTRSVTLAAELLDSSTASISRALKKMRDAFNDPLFIRTKQGLEPTALA 77 Query: 71 LNLHHHLEKNLRGLEQTINIVN--------KSELKKNFIIYGPQLISCSNNSMLIRCLRQ 122 N+ +L + L ++ N+ N ++ LK + P L L R L+ Sbjct: 78 YNITPNLAQALNNIQNAANLTNGIHQGDRRQTRLKLSM---SPLL-----EFYLTRLLQH 129 Query: 123 -----DS-SVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLI 176 DS ++ E HD ++ + + L RK D+ T + +P+ ++ ++ Sbjct: 130 YHYPFDSVALMTETHDGDLTRDISR--LRSRKIDISFTPQKYADWMITNVPVFDVQPAVL 187 Query: 177 CSNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIIN 236 C HPRI T +Q+ E++ L + +D ++ R + + SSLL ++ Sbjct: 188 CRVGHPRIGPGFTLDQLAQEDYLSLTMWPSLFEDDEVLNPHR---KAPIYSSSSLLNLMM 244 Query: 237 SIAVTDLLGIVPYELYNSYRDFLNLKEIK-LEHPLPSI--KLYISYNKSSLNNLVFSRFI 293 +A +D + + ++F L EI+ L+HP +Y Y+KS + I Sbjct: 245 MVASSDYILLCGKRF---AQEFARLVEIQVLDHPQGRSMGTIYAHYHKSRTTDPCIIELI 301 Query: 294 D 294 D Sbjct: 302 D 302 >UniRef50_B7RV99 Transcriptional regulator, LysR family protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RV99_9GAMM Length = 303 Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 66/284 (23%), Positives = 130/284 (45%), Gaps = 10/284 (3%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 L K DLNL V+F+ +Y+ S+++ A++L++T AVS +L RLR F+D LF+RS +G+ P Sbjct: 3 LDKVDLNLFVVFDALYRERSVTRVAQALHLTQPAVSNALSRLRQSFDDQLFVRSPRGMQP 62 Query: 67 TTTGLNLHHHLEKNLRGLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLI---RCLRQ- 122 T + ++K L L++T + + + + + + N +L L Q Sbjct: 63 TPVAEAISVDVQKALGLLQKTTLSGQRFDPGSAEMTFRLGMSDVAQNMVLPGLHNALAQL 122 Query: 123 DSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHP 182 V IE + + ++ A+ L DL++ V +R + + L ++ + + HP Sbjct: 123 APGVTIEAYYLDRASAVAQ--LKSGDLDLLLDAPQVNARELGQLHLGSLLYRVAMAKAHP 180 Query: 183 RITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTD 242 + +Q +A + + ++ G + + + RK+ R A +D Sbjct: 181 LAQVDLDIDQYLAAKHVHVSARPRGRGQVDLALHAIGHRRKVVVRVQQYAVAAAITAQSD 240 Query: 243 LLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNN 286 LL P S D L ++ + S+ L + +++S+ + Sbjct: 241 LLWTAP----GSVIDHPELHVVETPFQVESLVLNLYWHRSAAED 280 >UniRef50_Q5E1I8 Transcriptional regulator, LysR family n=3 Tax=Vibrionaceae RepID=Q5E1I8_VIBF1 Length = 279 Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 69/280 (24%), Positives = 128/280 (45%), Gaps = 25/280 (8%) Query: 11 DLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTTG 70 +LN + F +Y S++KAA+ L IT ++S ++++ + PLF++ G+ + PT Sbjct: 2 NLNFIKHFLAVYDFGSVTKAADYLNITQPSMSSAIKKFEESYGQPLFLKVGRSLEPTDAA 61 Query: 71 LNLHHHLEKNLRGLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSVEIEC 130 H L +R + + +V E + I+ P+++ S M L + +VE + Sbjct: 62 ----HSLAYQVRPIME--QLVMALESPRRLIVSAPEIVLQSLPDMDDALLTESPAVEYQM 115 Query: 131 HDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRITDNS-T 189 D + S E D++I + V + + L + C N HP I S + Sbjct: 116 LDKIRSGE----------VDILIDDITVTDYTFVTESLGKMDIAFACRNDHPTILGYSLS 165 Query: 190 YEQIMAEEFTQLISKSAGVDDIQM---EIDERFMNRKISFRGSSLLTIINSIAVTDLLGI 246 EQ E L K+ V + EI ER + R++S + LL++ N TD + I Sbjct: 166 LEQFNQAEHVMLKLKNENVGAFETRPDEIFERNIVREVSGPSNLLLSVRN----TDAICI 221 Query: 247 VPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNN 286 V ++ ++ L LK ++ PL ++ + Y++ ++ N Sbjct: 222 VAESMFGLAQE-LGLKVLESPFPLQPYEIKLIYHRRNITN 260 >UniRef50_C6XR04 Transcriptional regulator, LysR family n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XR04_HIRBI Length = 302 Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 38/100 (38%), Positives = 59/100 (59%), Gaps = 3/100 (3%) Query: 9 KFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTT 68 + DLNLL +FE +Y+ ++++AA L ++PSAVS +L+RLRA NDPLF++ G+ + PT Sbjct: 10 RLDLNLLKVFEAVYREQNLTRAANLLSLSPSAVSHALRRLRAHLNDPLFVKEGRIMRPTP 69 Query: 69 TGLNLHHHLEKN---LRGLEQTINIVNKSELKKNFIIYGP 105 + L LR L Q+ + ++ K F I P Sbjct: 70 VCARMAPDLLDEIDRLRALLQSWGKFDPAQSKIVFTIGMP 109 >UniRef50_B8KV86 Putative transcriptional regulator, LysR family n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KV86_9GAMM Length = 302 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 57/255 (22%), Positives = 112/255 (43%), Gaps = 8/255 (3%) Query: 6 DLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIA 65 +L+ DLNLL IF+ I +++ AA+ + ++ A+S +L RLR +D LF+ +G+G+ Sbjct: 2 NLRSVDLNLLTIFDAIVSEGNLTHAADKIGMSQPAISAALGRLRVTLDDELFVSTGRGVK 61 Query: 66 PTTTGLNLHHHLEKNLRGLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSS 125 PT L L + + L + + + + + + ++ I ++ R LR Sbjct: 62 PTQRALQLQEPVRRILEDVRAALTSTGEFDPESSDRVFTISSIDYGGIVVIPRLLRY--- 118 Query: 126 VEIECHDILMSAENAEELLVHR-----KADLVITQMPVISRSVICMPLHTIRNTLICSNR 180 ++ + I+++ ++ HR DL IT P++S C L + Sbjct: 119 LQKQQSPIIVNINPSQTGEAHRDVDRSSGDLTITSDPLLSPDHECKLLRRELPYCLARKD 178 Query: 181 HPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAV 240 HP IT + + EQ L S + + + + NR+ R S + + Sbjct: 179 HPDITGSLSVEQFQRNRHVLLYSNNTRGLALDAHLLQLGFNRECGARVPSFFNMPYIVGN 238 Query: 241 TDLLGIVPYELYNSY 255 TD++ +P ++ + Sbjct: 239 TDMICTMPRQMAEDF 253 >UniRef50_Q7MEL0 Transcriptional regulator n=18 Tax=Gammaproteobacteria RepID=Q7MEL0_VIBVY Length = 289 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 72/291 (24%), Positives = 117/291 (40%), Gaps = 24/291 (8%) Query: 11 DLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTTG 70 DLNL+ F + ++ S +KAA+ L +T AVS S++RL N LF++ G+GI PT + Sbjct: 6 DLNLIQTFLLVAEYQSYTKAADHLGLTQPAVSASIKRLEKVVNKQLFVKKGRGIEPTASA 65 Query: 71 LNLHHHLEKNLRGLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSVEIEC 130 L + Q I+IV+ N I C + ++L S IE Sbjct: 66 YQL-------IPKFHQAISIVD------NAISERSAFQVCCSETLL------HSLTPIE- 105 Query: 131 HDILMSAENAEELLV----HRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRITD 186 H + + + LL +K DL+I + S + + +IC HPRI Sbjct: 106 HTVFHESPPEKYLLFEQIRQQKMDLIIDTVITKDSSFVIENAYQEPAVVICRQGHPRIQG 165 Query: 187 NSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLGI 246 + Q E K + +E R + +SL ++ +A D LG+ Sbjct: 166 QLSKAQFYQESHCLFSGKWNNTTGFEQLANEPIEERIVEIVTTSLSSMALYVAQRDCLGV 225 Query: 247 VPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLN 297 V + L L+ + + I Y+K LNN R +++ Sbjct: 226 VSRSFALKWSKALKLQILDCPIAISLIPYKFIYHKRELNNPAHQRLREKIK 276 >UniRef50_B1MJW3 Putative transcriptional regulator, LysR family n=1 Tax=Mycobacterium abscessus ATCC 19977 RepID=B1MJW3_MYCA9 Length = 295 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 44/147 (29%), Positives = 75/147 (51%), Gaps = 7/147 (4%) Query: 10 FDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTT 69 DLNLL + + + Q S++ AAE L +P AVS+SL RLR D L +R+G+G+ PT Sbjct: 1 MDLNLLRVLDALLQENSVTAAAERLATSPPAVSRSLGRLRRITGDALLVRAGQGLVPTPR 60 Query: 70 GLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSV 126 + + L LR +Q + + +L++ FI+ +L + L+ LR D+ Sbjct: 61 AVQIRDELGGLLRRADQILRPGAEFDPGKLQRTFIVQAAELFLTALAVPLLERLRHDAP- 119 Query: 127 EIECHDILMSAENAEELLVHRKADLVI 153 +++ + E E+ R+ D+ I Sbjct: 120 ---GVNVVFAPEAREDTGALRRGDIDI 143 >UniRef50_Q081Z6 Transcriptional regulator, LysR family n=1 Tax=Shewanella frigidimarina NCIMB 400 RepID=Q081Z6_SHEFN Length = 303 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 71/283 (25%), Positives = 125/283 (44%), Gaps = 19/283 (6%) Query: 9 KFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTT 68 K DLNL V+F+ IY +I+KAA L ++ AVS SL +LR F+D LFIR G + PT Sbjct: 2 KIDLNLFVVFDAIYCEGNITKAASVLNLSQPAVSHSLGKLRTHFDDALFIRQGNEMRPTP 61 Query: 69 TGLNLHHHLEKNLRGLEQTINIVNKSEL-----KKNFIIYGPQLISCSNNSMLIRCLRQD 123 N+ + + L L+ + +V + +K+F + + S + L+Q Sbjct: 62 VAKNVIDDVREALHQLQ--VCLVQSRQFEPLTSRKSFSLS----LHGSLEPYYLPILQQ- 114 Query: 124 SSVEIECHDILMSAENA------EELLVHRKADLVITQMPVISRSVICMPLHTIRNTLIC 177 S+ +E I +S+ E L DL I + +S +++ L + ++ Sbjct: 115 -SLSLESPSINLSSNKRVRRTELENKLASGDIDLAIDTLIPVSNNIMHTQLELDQLVVVA 173 Query: 178 SNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINS 237 HP + + + + + S+S G E+ ++RKIS R L+ Sbjct: 174 RKNHPAMNPDLDLATYLKLDHVLVSSRSTGPSLEDFELSRIGLHRKISLRCQHALSACRV 233 Query: 238 IAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYN 280 I D+L +P Y L++ + LP I +++ ++ Sbjct: 234 ILNNDMLLTLPKTAAAMYSKMLDIDIHPMPVELPDIGVHLYWH 276 >UniRef50_A9BUT0 Transcriptional regulator, LysR family n=5 Tax=Comamonadaceae RepID=A9BUT0_DELAS Length = 309 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 66/262 (25%), Positives = 119/262 (45%), Gaps = 22/262 (8%) Query: 6 DLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIA 65 D+K DLNLL +F+ +Y+H S+S+AAE L ++ A SQ++ RLR +PLF R+ G+ Sbjct: 2 DIKNLDLNLLRVFDAVYRHCSVSRAAEELGMSQPAASQAVTRLRLLLGNPLFERAHAGVR 61 Query: 66 PTTTGLNLHHHLEKNLRGLEQTINIVNKSE---LKKNFIIYGPQLISCSNNSMLIRCLRQ 122 PT L + + L LE ++ E ++ F I+ + L++ L Q Sbjct: 62 PTPRAERLALAVRQALEVLEVAMSEAQSFEPLQARQRFRIHLSDIGEARFLPPLMQALHQ 121 Query: 123 DSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHP 182 + ++ + M + + L D+ I +P +R+ + L L+ S HP Sbjct: 122 RAP-HVQLETLPMPLDGIADALDRGTLDIAIGFLPGGTRTRQTVLLSDHYGVLLRSG-HP 179 Query: 183 RITD--------NSTYEQIMAEEFTQLISKSAGVDDIQ-MEIDERFMNRKISFRGSSLLT 233 + +T Q+ +F + S S + +Q + +DER I + + Sbjct: 180 ALAHLPEGAPLALATLRQL---DFAAVRSHSETLRILQALRLDER-----IRLSAAHFMA 231 Query: 234 IINSIAVTDLLGIVPYELYNSY 255 + + + TDL I+P E+ + Sbjct: 232 VPSIVGKTDLAVIMPAEIAAGF 253 >UniRef50_A8GG55 Transcriptional regulator, LysR family n=1 Tax=Serratia proteamaculans 568 RepID=A8GG55_SERP5 Length = 310 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 67/277 (24%), Positives = 120/277 (43%), Gaps = 18/277 (6%) Query: 6 DLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIA 65 +L DLNLLV+FE +YQ +++ A + L +VS +L RLR F+DPLF+RSG G+ Sbjct: 2 NLSNVDLNLLVVFEALYQTRNVTVAGQRLNRAQPSVSNALARLRTLFDDPLFVRSGGGML 61 Query: 66 PTTTGLNLHHHLEKNLRGLEQTINIVNK----SELKKNFIIYGPQLISCSNNSMLIRCLR 121 PT L ++ L + Q + + + ++ F + + +I LR Sbjct: 62 PTARAHQLMLQIQPVLEQIHQALTPPTRFDPATASQRRFRLAAGDYADITLLPTIISRLR 121 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 Q ++ I+ + + L + D+ + + ++ PL T I S H Sbjct: 122 Q-AAPGIDIRVSRLDRRTVVQQLERGEIDVALGGHLEVPEGMLVQPLFNESFTCIASRHH 180 Query: 182 PRITDNSTYEQIMAEEFTQLISKSAGVDD------IQMEIDERFMNRKISFRGSSLLTII 235 P+I S Q L + S DD I + E + R+++ S ++ + Sbjct: 181 PQIAAESWNLQQYIGLPHALYAPS---DDGSARGIIDQRLTEMGLERRVAATFSHIIALP 237 Query: 236 NSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPS 272 +A +DL+ + + + D ++ + PLPS Sbjct: 238 AVVAGSDLIATLATSVARQFADPSRIQFL----PLPS 270 >UniRef50_D0XC19 Putative uncharacterized protein n=1 Tax=Vibrio harveyi 1DA3 RepID=D0XC19_VIBHA Length = 317 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 44/132 (33%), Positives = 70/132 (53%), Gaps = 6/132 (4%) Query: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 M +LY DLNLL F IYQ ++ KA+ L++T A+S+SL +LR F+DPLF++ Sbjct: 1 MKDLY--SNLDLNLLRTFLVIYQEQNLQKASNRLFVTAPALSKSLTKLRNHFDDPLFVKV 58 Query: 61 GKGIAPTTTGLNLHHHLEKNLRGLEQTINIVNK---SELKKNFIIY-GPQLISCSNNSML 116 G++PT L+ +E L + +N +N+ +EL+ I P L+ + Sbjct: 59 PTGLSPTHFATELYGVIEPTFDKLSKKLNSLNQFDPAELEGKITIAISPVLLQALGKDLF 118 Query: 117 IRCLRQDSSVEI 128 RQ +VE+ Sbjct: 119 SEISRQAPNVEL 130 >UniRef50_B5ZVD7 Transcriptional regulator, LysR family n=4 Tax=Rhizobium RepID=B5ZVD7_RHILW Length = 321 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 34/89 (38%), Positives = 54/89 (60%) Query: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 M N L+K DLNLL+ F + Q ++S+AA+ L + +S +L+RLR +D LF+R Sbjct: 2 MMNDATLRKIDLNLLLAFSVLMQERNVSRAADRLLLGQPGLSAALRRLRETLDDELFVRV 61 Query: 61 GKGIAPTTTGLNLHHHLEKNLRGLEQTIN 89 G+G+ PT L++ +E L G+E+ I Sbjct: 62 GRGLQPTPRALSIAPAIEDALSGIERAIR 90 >UniRef50_A4XX96 Transcriptional regulator, LysR family n=3 Tax=Proteobacteria RepID=A4XX96_PSEMY Length = 312 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 69/266 (25%), Positives = 115/266 (43%), Gaps = 26/266 (9%) Query: 6 DLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIA 65 D ++ DLNLLV E + ++++AA L+++ AVS L RLR FNDPL I + +G+ Sbjct: 2 DTRRLDLNLLVTLEALLIEQNVTRAAARLHLSQPAVSAQLSRLRDVFNDPLLIPAQRGMT 61 Query: 66 PTTTGLNLHHHLEKNLRGLEQTINI-VNKSELKKNFIIYGPQLISCSN--NSMLIRCL-- 120 PT L L L + L + T+ +N + + I+C++ + LI+ L Sbjct: 62 PTVKALELLVPLRQALDQVRATVTTHLNFEPATASLTVS----IACTDYVQAALIKHLVV 117 Query: 121 ---RQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLIC 177 R+ V I ++ E + + DL + M ++ L+ LI Sbjct: 118 AMRREAPGVRIALR--ILDVPQLELQMTRGEVDLAVINMNGAPPALHAQHLYDESYVLIG 175 Query: 178 SNRHPRITDNSTYEQIMAEEFTQL----ISKSAG--VDDIQMEIDERFMNRKISFRGSSL 231 HP S + + +EF QL +S G + + R + R + SS Sbjct: 176 RRGHP-----SLHAGLTVDEFAQLEHVVVSLRGGGFSTSVDNALVARGLRRNVVLSASSF 230 Query: 232 LTIINSIAVTDLLGIVPYELYNSYRD 257 L + +A +D + +VP L RD Sbjct: 231 LPVPELVAQSDCVALVPRRLVEG-RD 255 >UniRef50_C4U8I2 LysR-family transcriptional regulatory protein n=2 Tax=Yersinia RepID=C4U8I2_YERAL Length = 290 Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 71/249 (28%), Positives = 114/249 (45%), Gaps = 13/249 (5%) Query: 26 SISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTTGLNLHHHLEKNLRGLE 85 ++S AE L ++ SAVS L +LR +NDP+ R GKG+ PT L L+ + LE Sbjct: 6 TVSLTAERLDMSISAVSVVLNKLRKHYNDPIMFRGGKGMQPTALTLELYKIFKP---ALE 62 Query: 86 QTINIVNKSEL--KKNFIIYGPQLISCS-NNSMLIRCLRQ---DS-SVEIECHDILMSAE 138 + VNK+ L +K + ++ S S L+ C+ Q DS +V E S + Sbjct: 63 MMDSGVNKTALLNEKGVAMRTVRIRSSSLVEFWLLGCMMQHPPDSHAVSYEFLSNQPSGQ 122 Query: 139 NAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRITDNSTYEQIMAEEF 198 ELL R+ D+ I ++ PL + L+C HPRI T+E++ AEE Sbjct: 123 KRIELLRRRQIDIDIGFSLENDSAIQRYPLFESGSVLVCRRDHPRIKAAVTFEELKAEEL 182 Query: 199 TQLISKSAGVDDIQ--MEIDERFMNRKISFRGSSLLTIINSIAVTDLLGIVPYELYNSYR 256 I V+ Q + D+ + + ++R +S ++ A +D + VP Sbjct: 183 LGWILPQDAVEKEQYLVSFDDIYTVHR-TYRSTSFTNLLMHTAHSDAVMFVPAPFAPQMC 241 Query: 257 DFLNLKEIK 265 L L+ +K Sbjct: 242 AMLPLRTVK 250 >UniRef50_C6XIT5 Transcriptional regulator, LysR family n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XIT5_HIRBI Length = 318 Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 75/304 (24%), Positives = 134/304 (44%), Gaps = 32/304 (10%) Query: 8 KKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPT 67 KKFDLNLL F+ +++ ++++AA L +T AVS +L RLR F D LFIR+ G+ PT Sbjct: 3 KKFDLNLLNTFDALWRERNVTRAARRLNVTQPAVSNALSRLRETFGDELFIRTPSGVDPT 62 Query: 68 TTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQD- 123 + + + LR +E+T+ + + + ++ F I L+ LR+ Sbjct: 63 ERCSEIAIDVREALRHVERTLASHDSFDPTVSERTFRIGAMDYFDHVVLPPLMEDLRKKA 122 Query: 124 -------SSVEI-ECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTL 175 S V++ E +D L S + D + + + P+ + L Sbjct: 123 PRVDLRISPVKLGETYDALDSGD----------LDFLFFSGTEPPKRINFSPMLEEKFVL 172 Query: 176 ICSNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEID----ERFMNRKISFRGSSL 231 I HP++ T + + T ++ + G D ID E + R+++ S Sbjct: 173 IMRANHPKMCQEMTLDAYA--DLTHIVFSTRG--DSHTRIDDLLAENGLRRRVALTSSHH 228 Query: 232 LTIINSIAVTDLLGIVPYELYNSY--RDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVF 289 +I ++ TD++ + P L + Y R L + +E P ++LY S +S ++ Sbjct: 229 TSIAETVRDTDMVALSPSRLAHRYVHRGGLIAVQPPVEFPHFHLRLYWSRRLNSDPGAMW 288 Query: 290 SRFI 293 R I Sbjct: 289 LRNI 292 >UniRef50_Q13GK2 Transcriptional regulator, LysR family n=1 Tax=Burkholderia xenovorans LB400 RepID=Q13GK2_BURXL Length = 311 Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 65/258 (25%), Positives = 122/258 (47%), Gaps = 21/258 (8%) Query: 10 FDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTT 69 D+ LL++F+ + + S+S+AA+ + +T SAVSQ L RLR F+DPLFIR+ G+ PT Sbjct: 10 LDIKLLLVFDALLRERSVSRAADDVGLTQSAVSQKLGRLRDIFSDPLFIRTANGMEPTPH 69 Query: 70 GLNLHHHLEKNLRGLEQTINIVNKSE---LKKNFIIYGPQLISCSNNSMLIRCLRQDSSV 126 L L L + L + ++ + E ++NF + +S ++R +R+ + Sbjct: 70 ALVLSAQLAELLARWKSLVSSQQRFEPATAERNFRVALSDGMSYHCLPPVVRRIREIAP- 128 Query: 127 EIECHDILMSAENAEELLVHRKADLVIT--QMPVISRSVICMPLHTIRNTLIC--SNRHP 182 + + + + + ADL + Q P I S C R TL C +P Sbjct: 129 NLRITIVHVGPRGGQREIESGSADLALGVFQQPPIGIST-C---ELFRYTLQCVADKNNP 184 Query: 183 RITDNSTYEQIMAEEFTQLISKSAGVDD-----IQMEIDERFMNRKISFRGSSLLTIINS 237 R+ + + +E+ + + G ++ +++ ++ + RKI+ ++I N Sbjct: 185 RLKQGT----MSRDEYLEASHIAVGENNVPGTLVEVIVEALGLKRKIALVTPHFVSIPNL 240 Query: 238 IAVTDLLGIVPYELYNSY 255 + TDL+G P ++Y Sbjct: 241 VLGTDLIGTFPSSAQDAY 258 >UniRef50_A9AQX4 Transcriptional regulator, LysR family n=20 Tax=Proteobacteria RepID=A9AQX4_BURM1 Length = 315 Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 67/296 (22%), Positives = 123/296 (41%), Gaps = 10/296 (3%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 L K DLNL V+F+ IY ++++AAE L +T AVS +L R+R NDPLF+ + G+ P Sbjct: 20 LSKIDLNLFVVFDAIYNKRNLTRAAELLNLTQPAVSNALARMRKTLNDPLFVSTPAGMMP 79 Query: 67 TTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCL-RQ 122 T N+ + + L+ L+ ++ ++ + + ++ F + L L L RQ Sbjct: 80 TPFAENIVGRVREALQLLDSSVHEGDVFDPASSERVFRLSMSDLTEALLLPALGELLQRQ 139 Query: 123 DSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHP 182 + + + M L + D+ I + + PL R + + HP Sbjct: 140 APGMHVRSY--TMDRREIATALANGTVDIAIDAPLLGDPHLHQAPLVRDRYACMIRDGHP 197 Query: 183 RITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTD 242 D T + +A + S+ G + E+ + R I R + D Sbjct: 198 FKGDTLTMDDYLAMGHIHVSSRRKGSGHVDAELTRLGLRRNIQMRVQHYMVAPLIAMRGD 257 Query: 243 LLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 L P L Y + ++L +P ++ + +++S+ + +RL E Sbjct: 258 LALTAPLRLLQRY----PARILELPFEMPGLEYFCYWHRSADQDQANRWLRERLAE 309 >UniRef50_A9G5G2 Nodulation protein D n=2 Tax=Proteobacteria RepID=A9G5G2_SORC5 Length = 366 Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 69/299 (23%), Positives = 134/299 (44%), Gaps = 33/299 (11%) Query: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 M +D+ DLNL+ + + +++A + L +T SA S +L RLR F DPLF+R+ Sbjct: 57 MPAFHDVASVDLNLVRVLGALLDERHLTRAGKRLGLTQSATSHALGRLRRLFGDPLFVRT 116 Query: 61 GKGIAPTTTGLNLHHHLEKNLRGLEQTINIVNK---SELKKNFII----YGPQLISCSNN 113 +G+APT L + + +R L++ + ++F + YG +++ Sbjct: 117 SRGLAPTARAEELAEPVREAMRALDRCFRAEEPFVAASAARSFSVATADYGSFVLA---P 173 Query: 114 SMLIRCLRQDSSVEIECHDILMSAENA--EELLVHRKADLVITQMPVISRSVICMPLHT- 170 +L R R+ +V D+ + A +A EE L AD+V+ R + +H+ Sbjct: 174 KLLDRLGREAPNV-----DLWLRALDASFEEQLARGDADVVVAPA---RRDGLPAGIHSR 225 Query: 171 --IRNTLICSNR--HPRIT---DNSTYEQIMAEEFTQLISKSAG-VDDIQMEIDERFMNR 222 R C R HP + D +++ M F G VD+ ++ +R R Sbjct: 226 LLYRERFACLVRKGHPLVKKGIDLASWTS-MRHVFIAPRGTPGGVVDETLAQLGKR---R 281 Query: 223 KISFRGSSLLTIINSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNK 281 +++ L + +A +DL+ V + ++ + L L+ + LP ++ + +++ Sbjct: 282 RVALAVPHFLLAPHVVAGSDLVVTVGARVAEAFAEILPLRVVDPPVKLPGFEVRMYWHE 340 >UniRef50_Q1N663 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Bermanella marisrubri RepID=Q1N663_9GAMM Length = 306 Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 71/301 (23%), Positives = 132/301 (43%), Gaps = 19/301 (6%) Query: 9 KFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTT 68 K DLNL +FE IY S+++AAE L +T A+S +L RLR + +DPLF+R G + PT Sbjct: 2 KIDLNLFTVFEAIYLEGSLTRAAERLNLTQPAISHALSRLRERLDDPLFVRQGHKMRPTP 61 Query: 69 TGLNLHHHLEKNLR---GLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCLR---- 121 L ++ LR G Q + N +E +K + + ++ + +++ L Sbjct: 62 LAQKLIPDIQAALRQLNGALQQSHHFNPAEAEKTYRVAMRDVMEATLLPPVLKGLDNIAP 121 Query: 122 --QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSN 179 Q +SV IE D+ E L + D V+ + S + L +I + Sbjct: 122 NIQLASVHIERRDM-------ESKLASGELDFVVDVLLPTSEQIYKKKLLNDELVVIYNP 174 Query: 180 RHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIA 239 ++ + T E+ + + + ++++G + + +NR ++ R + Sbjct: 175 ALSQLPEGFTEEEYLRAKHILVSTRASGPSLVDYALSAEGLNRNVALRCQHYYAACQVAS 234 Query: 240 VTDLLGIVPYELYNS--YRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLN 297 +L +P Y S + F L+ L SI +Y+ +++S + + F D L Sbjct: 235 DNGMLLTMPSR-YASILLQHFPTLQRSSLPFKTSSIDVYLYWHESLNEDGANAWFRDMLQ 293 Query: 298 E 298 + Sbjct: 294 Q 294 >UniRef50_A4YPA1 Putative transcriptional regulator, LysR family n=1 Tax=Bradyrhizobium sp. ORS278 RepID=A4YPA1_BRASO Length = 310 Score = 70.5 bits (171), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 38/90 (42%), Positives = 54/90 (60%), Gaps = 2/90 (2%) Query: 1 MANL--YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFI 58 MAN+ DL+ DLNLLV FE + Q S+S+ A+ L I + S +L+RLRA DPLF+ Sbjct: 1 MANIDRADLRDVDLNLLVAFEALMQTRSVSRMAQRLRIGQPSASHALKRLRALLGDPLFV 60 Query: 59 RSGKGIAPTTTGLNLHHHLEKNLRGLEQTI 88 R+ G+ PT L L + L +E+T+ Sbjct: 61 RTPAGMIPTPHALALAEPIRAILTSIERTL 90 >UniRef50_A5VCH0 Transcriptional regulator, LysR family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5VCH0_SPHWW Length = 327 Score = 70.5 bits (171), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 69/286 (24%), Positives = 113/286 (39%), Gaps = 27/286 (9%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 + DLNLL +F+ + + S++ AA L +TPSAVS SL RLR D LF+R KG+ P Sbjct: 6 FRSLDLNLLRVFDALTEEGSVTGAAGLLGLTPSAVSHSLNRLRHILKDDLFLRGAKGMNP 65 Query: 67 TTTGLNLHHHLEKNLRGLEQTIN---IVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQD 123 T L L + + L ++Q +N V + ++ I G + + ++ R + Sbjct: 66 TPKALALAVPIRRALVDIQQALNGDSFVPEKTDRRFSIACGDYVTAVLMPEVIARFRKAA 125 Query: 124 SSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPR 183 E+ + +EL R DL + I + PL + P Sbjct: 126 PLAELRIQPV---GAVMKELDAGR-IDLAMGGFERIPERLASEPLFADDMVWVMRADSPF 181 Query: 184 ITDNSTYEQIMAEEFTQLISK------SAGVDDIQME--------------IDERFMNRK 223 T E + A + S S V D +E +ER + R Sbjct: 182 ANRQPTLEGLAALPHLAIASPDNDRAVSGIVSDAGLERRVVRDDPRILDQYFEERGLRRT 241 Query: 224 ISFRGSSLLTIINSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHP 269 ++ + + + +A DL ++P L ++ D L K HP Sbjct: 242 VAMTAPNPIVAMAIVAECDLAAMMPRNLAEAFADRYKLALWKPPHP 287 >UniRef50_B5XRQ2 Transcriptional regulator, LysR family n=4 Tax=Klebsiella RepID=B5XRQ2_KLEP3 Length = 307 Score = 70.5 bits (171), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 64/304 (21%), Positives = 129/304 (42%), Gaps = 16/304 (5%) Query: 6 DLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIA 65 D + DLNLL + +Y+ S+++ AE L++ A+S +L+RLR F+DPLF+RS +G+ Sbjct: 8 DFSRIDLNLLTVLMVLYREASVTRTAEVLHLGQPAISGALKRLREMFDDPLFVRSARGML 67 Query: 66 PTTTGLNLHHHLEKNLRGLEQTINIVNKSELKKNFIIYGPQLISCSNNSM---LIRCLRQ 122 PT L L+ + L + + + ++ L S + + L+ L Q Sbjct: 68 PTPRAQALMTDLQPLMENLHSAMFGAGEFVPARAQQLFRIGLSDWSEHWLMPQLLPGLMQ 127 Query: 123 DSSVEIECHDILMSAENAEELLVHRKADLVI-----TQMPVISRSVICMPLHTIRNTLIC 177 ++ + I +LL + D+ + ++ V+S V+ M + T+ + Sbjct: 128 EAP-GVSLQSIAADPFQVRQLLEEERIDVAVSVNKQSRGEVVSEPVMTMGVTTLWSPQQI 186 Query: 178 SNRHP-RITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIIN 236 R P ++D +E +M + + G +I ++ + + R++ F + T Sbjct: 187 PCRGPLSVSDFVAWEHVM------VAYRETGHGEIDRQLASQGLARRVRFATQNFSTFPL 240 Query: 237 SIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRL 296 + L VP L ++ L+ P L I +K + + + +L Sbjct: 241 LLTTLPLFATVPQGLAQRWQAQHALRADAPPVTYPEFTLCILRHKRRAQDPALNWLVTKL 300 Query: 297 NESF 300 ++ Sbjct: 301 KQAM 304 >UniRef50_A3Y808 Transcriptional regulator, LysR family protien n=1 Tax=Marinomonas sp. MED121 RepID=A3Y808_9GAMM Length = 301 Score = 70.5 bits (171), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 64/251 (25%), Positives = 116/251 (46%), Gaps = 12/251 (4%) Query: 6 DLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIA 65 DL + DLNLL++F+ +Y+H S+S AA+ + I+ SA S + RLR +FND LF+R + Sbjct: 2 DLHQIDLNLLILFDALYRHQSVSLAADEVCISQSAFSHGIARLRKRFNDELFVRVNNQMQ 61 Query: 66 PTTTGLNLHHHLEKNLRGLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSS 125 PT + HL + L + IN + + + + + S+L + + Q S Sbjct: 62 PTPRAEEIAQHLHQALPFIHNAINDSDHFDASMDKTEFKISATDYTEFSLLPKLVGQVSH 121 Query: 126 VEIECHDILMSAENAEEL--LVHRKADLVITQMPVISRSVICMPLHTIRNTLICS---NR 180 ++ A+ + L L + + D + I S + + HT + C+ Sbjct: 122 QAPNIKLTVIGAKAPQPLTHLENNEVDFALGFSHEIEASSL-IEHHTWLSDSYCTVARKN 180 Query: 181 HPRIT---DNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINS 237 HP +T D T+ ++ + K VD + + + + R +S + S+L +S Sbjct: 181 HPALTQGLDLDTFLELKHVRVSPWGEKQGIVDQV---LAQHKLKRHVSLQLPSVLVAPHS 237 Query: 238 IAVTDLLGIVP 248 I +DL+ +P Sbjct: 238 IIHSDLILTMP 248 >UniRef50_A9BZQ9 Transcriptional regulator, LysR family n=1 Tax=Delftia acidovorans SPH-1 RepID=A9BZQ9_DELAS Length = 323 Score = 70.5 bits (171), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 36/123 (29%), Positives = 66/123 (53%), Gaps = 8/123 (6%) Query: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 MAN YDL NLL+ + + S+++AA ++++ A+S +L R+R F DP+ +R+ Sbjct: 1 MANTYDL-----NLLIALDALLSTGSVTQAAGRMHLSTPAMSHTLARIREAFGDPILVRA 55 Query: 61 GKGIAPTTTGLNLHHHLEKNL---RGLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLI 117 G+ + PT L L + L R L+ ++ + L++ F++ P+ I+ + L Sbjct: 56 GRSLVPTPRALALAEPVRALLAQARALQDPVDAGGLAGLRRRFVVRAPEGIAVVFGASLS 115 Query: 118 RCL 120 R L Sbjct: 116 RAL 118 >UniRef50_A3QJ07 Transcriptional regulator, LysR family n=25 Tax=Alteromonadales RepID=A3QJ07_SHELP Length = 330 Score = 70.5 bits (171), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 36/84 (42%), Positives = 53/84 (63%) Query: 3 NLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGK 62 NL +L + DLNLLV+ + + + S+++AA L+++ SA+S+SL RLR DPLFIR+ Sbjct: 2 NLDNLARIDLNLLVMLQVLLEERSVTRAASRLHLSQSALSKSLNRLRDTLGDPLFIRTAH 61 Query: 63 GIAPTTTGLNLHHHLEKNLRGLEQ 86 G+ PT L L L+GL Q Sbjct: 62 GLKPTAHAALLGQQLPDMLQGLYQ 85 >UniRef50_C6B2W9 Transcriptional regulator, LysR family n=4 Tax=Rhizobiaceae RepID=C6B2W9_RHILS Length = 334 Score = 70.1 bits (170), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 3/112 (2%) Query: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 M N DL + DLNLLV+FE + + + ++ + L ++PSA+S L RLR DPLF+++ Sbjct: 1 MLNHIDLSRIDLNLLVLFETVMEERHVGRSGQRLNLSPSAISHGLGRLRMLLGDPLFLKT 60 Query: 61 GKGIAPTTTGLNLHHHLE---KNLRGLEQTINIVNKSELKKNFIIYGPQLIS 109 KG+ PT L + +R + T + + ++ F I P +S Sbjct: 61 PKGVVPTDRAEELAAPIADILARVRSVVATAEPFDPAHSQRRFTIGAPDGVS 112 >UniRef50_A1R1P0 Putative transcriptional regulator, LysR family n=1 Tax=Arthrobacter aurescens TC1 RepID=A1R1P0_ARTAT Length = 314 Score = 70.1 bits (170), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 35/80 (43%), Positives = 51/80 (63%) Query: 3 NLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGK 62 N +L+K DLNLLV+F + Q +++AA L+IT AVS +L RLR F+DPLF +S Sbjct: 5 NETNLRKIDLNLLVVFHVLMQERHVTRAAAKLHITQGAVSAALGRLRLLFDDPLFQKSRT 64 Query: 63 GIAPTTTGLNLHHHLEKNLR 82 G+ PT L L + ++L+ Sbjct: 65 GMVPTAKALALAPRIGQSLK 84 >UniRef50_Q2SKI3 Transcriptional regulator n=3 Tax=Oceanospirillales RepID=Q2SKI3_HAHCH Length = 296 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 67/303 (22%), Positives = 132/303 (43%), Gaps = 48/303 (15%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 ++K +++ L + +Y+ +I+ AAESL ++ A+SQ L++LR +D LF+R+G G+AP Sbjct: 2 IEKLEIHHLRTLDALYRFGNITAAAESLDLSQQAISQQLKKLRGILSDQLFVRTGHGVAP 61 Query: 67 TTTGLNLHHHLEK--------------NLRGLEQTINIVNKSELKKNFIIYGPQLISCSN 112 T + H+++ +L +E+T+ +++ ++ + I+ G Sbjct: 62 TPYAKQIEPHIQRVLAHLHAIPLPEAFSLAKMERTL-VISATDYTQKVIVTG-------- 112 Query: 113 NSMLIRCLRQDSSVEIECHDILMSAENAEELLVHRKA-----DLVITQMPVISRSVICMP 167 L+ LR+ + + + N E + RK DL T + ++ P Sbjct: 113 ---LVAELRKAAP------RVKVVVANIESASLTRKMRQGEIDLAFTSHGYVPEGLLSEP 163 Query: 168 LHTIRNTLICSNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERF----MNRK 223 L T R + ++ + +Q++A +F I S GV D F + R Sbjct: 164 LFTERYLCVSADAGLAGQGEISLDQLVARDF---IVTSPGVGGFAGSADAWFEQQGLRRN 220 Query: 224 ISFRGSSLLTIINSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSS 283 ++ S + TD++ VP L L EI L+ P ++ +Y+ S+ Sbjct: 221 VTISAPSFHIAQEYLKATDMVAFVPSRLLPCE----GLFEIPLKKYPPGYEVVAAYHPSA 276 Query: 284 LNN 286 ++ Sbjct: 277 KDD 279 >UniRef50_A0KKG7 HTH-type transcriptional regulator YidZ n=3 Tax=Aeromonas RepID=A0KKG7_AERHH Length = 324 Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 66/260 (25%), Positives = 118/260 (45%), Gaps = 25/260 (9%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 L DLNLLV+F + Q S++KAA+ L +T VS++L RLR F+DPLF+R+ +G+ P Sbjct: 4 LIDLDLNLLVVFRLLLQERSVTKAAKKLNVTAPTVSKALARLRDWFDDPLFLRTQRGLEP 63 Query: 67 TTTGLNLHHHLEKNLRGLEQTINIVN------KSELKKNFIIYGPQLISCSNN-SMLIRC 119 T L L L++ + + NI + + ++ P IS N+ M+I Sbjct: 64 TNLSLTLEEELKE---WFQLSGNIASLCGNAIPAGAAFRLVLESPFYISFLNDLPMVIYE 120 Query: 120 LRQDSSVEI--ECHDILMSAENAEELL------VHRKADLVITQMP-VISRSVICMPLHT 170 + S++ I H L N + L H + + ++P I V L Sbjct: 121 TYRKSTIRIMNWDHHSLNDIINGDADLGFCARETHPSSLARVNRLPYYIDHEV----LFE 176 Query: 171 IRNTLICSNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSS 230 R + HP + + +A ++ +++ + +D+ ++R++ R SS Sbjct: 177 DRPMVFLRKDHPLLARTWNLDNFLAYPHVSVVWEASDAWALDSLLDDEGLSRQVPIRVSS 236 Query: 231 LLTIINSIAVTD--LLGIVP 248 ++ A +D L+ +VP Sbjct: 237 FEQALHIAAQSDHELIAVVP 256 >UniRef50_Q4KCL9 Transcriptional regulator, LysR family n=15 Tax=Proteobacteria RepID=Q4KCL9_PSEF5 Length = 311 Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 51/165 (30%), Positives = 81/165 (49%), Gaps = 24/165 (14%) Query: 3 NLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGK 62 N ++ DLNLL FE ++ S S+AA L +T SA+S +L+RLR + DPLF+R+G+ Sbjct: 2 NQMNIASVDLNLLKAFEALHDESSASRAALRLGVTQSAMSAALRRLRELYGDPLFVRTGR 61 Query: 63 GIAPTTTGLNLHHHLEKNLRGLEQTINIVNKSE-----------LKKNF-IIYGPQLI-S 109 G+APT L + + L Q++ +V L +F I YG Q+I + Sbjct: 62 GLAPTLKANQLKPVVSEALNKCRQSLAMVAPDTADYQGRSVTLGLSDDFEIAYGRQMIEA 121 Query: 110 CSNNSMLIRCLRQDSSVEIECHDILMSAENAEELLVHRKADLVIT 154 + + +R + + S +I E L+ R DL I+ Sbjct: 122 VARRAPKLRLIFRQSHSQI-----------VAEALLQRSVDLAIS 155 >UniRef50_Q3KIF1 Putative LysR-family transcriptional regulator n=1 Tax=Pseudomonas fluorescens Pf0-1 RepID=Q3KIF1_PSEPF Length = 91 Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 31/80 (38%), Positives = 51/80 (63%) Query: 11 DLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTTG 70 DLNL++IF +++ S+S+ AE L++ A+S SL RLR +F+DPLF+RS + + PT+ Sbjct: 12 DLNLIIIFLVLFRERSVSRTAERLHVKQPAISGSLARLRKRFDDPLFLRSSRTMRPTSKA 71 Query: 71 LNLHHHLEKNLRGLEQTINI 90 L L ++ +E I + Sbjct: 72 EQLAQALTPAIKQIEAVIRL 91 >UniRef50_Q5LVV7 Transcriptional regulator, LysR family n=2 Tax=Ruegeria RepID=Q5LVV7_SILPO Length = 303 Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 33/81 (40%), Positives = 51/81 (62%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 +D D +L F I + S+S+AA+ L +T SAVS +L +LRA DPLF+RSG+G+ Sbjct: 4 FDFTDLDGKVLRCFLVILEESSVSRAADRLGVTQSAVSHTLAKLRAVLGDPLFVRSGQGL 63 Query: 65 APTTTGLNLHHHLEKNLRGLE 85 PT L+L +++ L G++ Sbjct: 64 TPTERALSLREPVQRVLDGIK 84 >UniRef50_B7VP76 Transcriptional regulator (Lys R family) n=2 Tax=Vibrio RepID=B7VP76_VIBSL Length = 304 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 66/291 (22%), Positives = 131/291 (45%), Gaps = 9/291 (3%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 +K D +L+ F + + LSIS A+ +T A+S++L RL+ ++DPLF+++ +G P Sbjct: 1 MKNTDFSLIPYFVVMMEELSISNTAKRFGVTQPAISKALNRLKETYDDPLFVKTKEGYRP 60 Query: 67 TTTGLNLHHHLEKNLRGLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRC--LRQDS 124 ++ +++ +++ E T K + K + IS + S++ R + Sbjct: 61 SSFCYDIYPQIKQAYDAFESTFPSKRKFDPTKIERSFNVACISGATYSLMKRVSDILYAE 120 Query: 125 SVEIECH-DILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPR 183 + +I H D +A+ +L HR DL I P+ ++ C+ L + HPR Sbjct: 121 TPDIGLHIDPYYTADIILDLRQHR-YDLCIVHTPINDPAMECIQLSNEPMVVAYDKNHPR 179 Query: 184 ITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDL 243 + + T E+ + E+ L S + + + +RK++ + +++ + TD Sbjct: 180 LGNEITLEEYLEEKHV-LHSMWDTKESPLTKTSKYAKSRKVARKAPGPFEMLDMVRGTDW 238 Query: 244 LGIVPYELYNSYR--DFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRF 292 L I + Y D L + E L + Y+ ++KS ++ S F Sbjct: 239 LCISQKSILERYGLLDDFKLSPLPFESDLGT--EYLVWHKSRNADMAHSWF 287 >UniRef50_A7JY23 Transcriptional regulator LysR family n=3 Tax=Vibrio RepID=A7JY23_VIBSE Length = 280 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 69/264 (26%), Positives = 114/264 (43%), Gaps = 35/264 (13%) Query: 11 DLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTTG 70 D NL+ F + ++ S S+AAE L +T A+S S++RL + N LF++ G+ I T+ Sbjct: 2 DFNLIQTFLIVAEYQSYSRAAEHLGLTQPAISASMKRLEKETNKSLFVKDGRQIKLTSVA 61 Query: 71 LNLHHHLEKNLRGLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSVEIEC 130 L L Q ++N + I S N LI + +++ I Sbjct: 62 HQL-------LPKFHQAFAMINDA-------ISDQSTFRLSCNEALIHRITPTNTISICA 107 Query: 131 HDILMSAENAEELLVHRKADLVITQMPV-----ISRSVICMPLHTIRNTLICSNRHPRIT 185 L S N L ++ DL+I+ + IS SV P+ +IC HPRI Sbjct: 108 DTDLPSLLNDLRL---KQIDLIISPTTIHNPSFISESVFEEPM-----VVICRQDHPRIA 159 Query: 186 DNSTYEQIMAEEFTQLISKSAGVDDIQMEIDE----RFMNRKISFRGSSLLTIINSIAVT 241 EQ +E+ + + G +D + E R + +SL ++ +A Sbjct: 160 GKIEQEQFYSEKHCRFV----GDEDFPVSNTEIHQPGLQERDVEMMTTSLSGMMLYVAKH 215 Query: 242 DLLGIVPYELYNSYRDFLNLKEIK 265 D LG++P L ++ LNL+ I+ Sbjct: 216 DCLGVLPLSLAQKWQSALNLQVIQ 239 >UniRef50_Q13YH7 Transcriptional regulator, LysR family n=12 Tax=cellular organisms RepID=Q13YH7_BURXL Length = 317 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 69/287 (24%), Positives = 121/287 (42%), Gaps = 21/287 (7%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 L + DLNLL +F+ I + S+++A E L ++ A+S SL RLR F+DPLFIR+ G+ P Sbjct: 15 LDQVDLNLLRVFQAIVEERSLTRAGERLALSQPAISYSLGRLRTLFDDPLFIRTRAGMQP 74 Query: 67 TTTGLNLHHHLEKNLRGLEQTINIVNKSELKKNFIIYGPQLISCSNNSML---IRCLRQD 123 T L L + + L + + + + + + L + L L Q Sbjct: 75 TPIALELSAIVARALDTVREALRYAEHFDPAVSTRTFRVSLSDAGELAYLPPICEALHQQ 134 Query: 124 SS---VEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNR 180 + + IE + E E+ L + D I +P ++ L T +C R Sbjct: 135 APRVRLRIEP----LPVEEIEDALRASRLDFAIGNLPTLTARTRHQAL--FEETYVCMTR 188 Query: 181 H----PRITDNSTYEQIMAE--EFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTI 234 PR + S + A + T + +DD E + + R I+ + + Sbjct: 189 KRRGLPRAKELSLKAFLDASHVQITSVEHSHRALDD---EFRTQGVGRHIALELPHFVAL 245 Query: 235 INSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNK 281 + +AVTDL +P L + N + +L LP + + +++ Sbjct: 246 PSVLAVTDLFATLPRRLAQIFNRGGNFQIYELPVTLPIAAVTMHWHE 292 >UniRef50_A6E126 Transcriptional regulator, LysR family protein n=1 Tax=Roseovarius sp. TM1035 RepID=A6E126_9RHOB Length = 293 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 51/183 (27%), Positives = 82/183 (44%), Gaps = 6/183 (3%) Query: 6 DLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIA 65 D KFD+NLL + + + S + A + + ++ SAVS +L RLR NDPLF+R G+ + Sbjct: 2 DFSKFDMNLLRVLDALLITRSTTVAGQQVGLSQSAVSSALGRLRVALNDPLFLREGRHLV 61 Query: 66 PTTTGLNLHHHLEKNLRGLEQTINIVNKSEL---KKNFIIYGPQLISCSNNSMLIRCLRQ 122 PT +L + L E + E +++F I G + L+ L Sbjct: 62 PTDYAQSLAQPVRAILAETEALLTRPTSFEPARSERHFHILGAEFWGAHLLPELMAHLAS 121 Query: 123 -DSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 V + C MS + E L+ ++ADL + M + PL+ L+ H Sbjct: 122 VAPGVTLYC--ATMSGPDPSEALLLKRADLALCPMCDLPDWAAAQPLYRAGQVLLARQDH 179 Query: 182 PRI 184 PR+ Sbjct: 180 PRL 182 >UniRef50_A0KG94 Transcriptional regulator, LysR family n=5 Tax=Gammaproteobacteria RepID=A0KG94_AERHH Length = 318 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 44/130 (33%), Positives = 70/130 (53%), Gaps = 7/130 (5%) Query: 18 FECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTTGLNLHHHL 77 F+ + S+++AAE+L+I+ A+S +L RLR F DPL +R+ +G+ PT LH + Sbjct: 15 FDALMAQGSVTRAAETLFISQPAMSHALNRLRTFFGDPLLVRTPQGMLPTPRAQRLHLGV 74 Query: 78 EKNLRGLEQTIN---IVNKSELKKNFIIYGPQLISCSNNSMLI-RCLRQDSSVEIE---C 130 ++ LR LEQ ++ + S+ K+ F++ + C LI R R +V IE Sbjct: 75 QQALRLLEQQLSDEEVFEPSQSKRRFVLCTTDYVECVLIPPLIQRLKRLAPAVTIEIRIL 134 Query: 131 HDILMSAENA 140 D L AE A Sbjct: 135 RDTLPEAELA 144 >UniRef50_A4XRF8 Transcriptional regulator, LysR family n=2 Tax=Pseudomonas RepID=A4XRF8_PSEMY Length = 320 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 31/68 (45%), Positives = 47/68 (69%) Query: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 M N DL++ D+NLLV+FE + ++S+ E L++ AVS +L RLR F+DPLFIR+ Sbjct: 1 MMNRNDLRRADINLLVVFETMMHEQNVSRVGEKLFLGQPAVSAALGRLRHLFDDPLFIRT 60 Query: 61 GKGIAPTT 68 G+ + PT+ Sbjct: 61 GRVMEPTS 68 >UniRef50_A5W6Q9 Transcriptional regulator, LysR family n=12 Tax=Pseudomonas RepID=A5W6Q9_PSEP1 Length = 326 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 68/285 (23%), Positives = 123/285 (43%), Gaps = 19/285 (6%) Query: 6 DLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIA 65 ++ FDLNLL +F+ + + ++S+AAE L +T VS +L RLR Q DPL +R G+ + Sbjct: 27 NISNFDLNLLRVFDMLLREQNVSRAAERLALTQPTVSNALARLRDQLGDPLLVRVGRRMR 86 Query: 66 PTTTGLNLHHHLEKNLRGLEQTINIVNKSELKKNF----IIYGPQLISCSNNSMLIRCLR 121 PT L L + L+ +EQT+ + E +++ I + +L R Sbjct: 87 PTPRALALEGPIRAALQQIEQTLGTGDGFEPQRSHRQLRIALTDFVEQLCMPPLLARLEL 146 Query: 122 QDSSVEIECHDILMSAEN-AEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNR 180 +V I D++ A N E L DLV+ + + P + + Sbjct: 147 LAPNVRI---DVVHLAPNLPAEALDRGDLDLVLGRFDEVPARFTRHPWRRETLQIALRQQ 203 Query: 181 HPRITDNSTYEQIMAEEFTQL------ISKSAGVDDIQMEIDERFMNRKISFRGSSLLTI 234 HP + + + F L ++ G+ D + E+ + R+I++ + L Sbjct: 204 HPHLVPGQALD---LDAFLGLRHIWVHGGQTRGMVD--QWLAEQGLTRQIAYTTPNYLQA 258 Query: 235 INSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISY 279 + A TD+ ++P +L + L L +L L +L + + Sbjct: 259 AHLAAATDMCVVLPRQLAQQFAHLLPLAVYELPFALEPFELEVVH 303 >UniRef50_Q39AY8 Transcriptional regulator, LysR family n=1 Tax=Burkholderia sp. 383 RepID=Q39AY8_BURS3 Length = 331 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 51/196 (26%), Positives = 92/196 (46%), Gaps = 6/196 (3%) Query: 6 DLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIA 65 DL+ DLNLL++F+ +Y+ S ++AA++L++T +VS +L+RLR F+D LF+++ G+ Sbjct: 22 DLRNIDLNLLLVFDVLYRTRSTTRAADALHLTQPSVSNALKRLRTLFDDALFVKTADGMQ 81 Query: 66 PTTTGLNLHHHLEKNLRGLE---QTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQ 122 PT + +++ L L Q + + + F +Y L L+ LR+ Sbjct: 82 PTPRADAIAARVDEGLASLRTALQAGRAFDPATSTRTFRLYTSDLGQAIFMPPLVAHLRR 141 Query: 123 -DSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 + I D + A A++++ + DL + + L + N H Sbjct: 142 VAPGIRIVTADPPLDA--AQQMMKLGQIDLALGMFTGLHADFHQQRLFHETYVALVRNDH 199 Query: 182 PRITDNSTYEQIMAEE 197 P I T EQ A + Sbjct: 200 PMIGATLTAEQFFAAD 215 >UniRef50_A8H854 Transcriptional regulator, LysR family n=1 Tax=Shewanella pealeana ATCC 700345 RepID=A8H854_SHEPA Length = 303 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 73/295 (24%), Positives = 138/295 (46%), Gaps = 23/295 (7%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 + + DLNLL +F + + + KAAE L+++ AVS++L+RLR F D LF+RS G+ P Sbjct: 1 MSQLDLNLLKVFRVLIEVKNTRKAAEILHLSQPAVSRALRRLRDYFGDELFVRSAHGLEP 60 Query: 67 TTTGLNLHHHLEKNLRGLEQTINIVNKSELKKNFIIYGPQLISCSNN---SMLIRCLRQD 123 T+ L + L + + L + +N+ K E + F Y ++ N L+ L + Sbjct: 61 TSKALVIGSRLPEAMDQLFEALNV--KEEFEPQF--YSGKVTIAVNGFIAHWLVPPLIKA 116 Query: 124 SSVEIECHDILMS--AENAEELLVHRKADLVITQMPV-ISRSVICMPLHTIRNTLICSNR 180 + + +I M+ E+ + +++ + L I P+ +++ +I L + ++C Sbjct: 117 LTEKAPNMEIYMANWEESTSDKIINGEIQLAINYFPLELTKQLIQEKLGSDDFVVLCRKD 176 Query: 181 HPRITDNSTYEQIMAEEF------TQLISKSAGVDDIQMEIDERFMNR-KISFRGSSLLT 233 HP E I AE+F + ++ + +E ++ + ++ S + Sbjct: 177 HP-----FQKEVIGAEDFPKYPLASHIVPGWNETKNFTVEALKKLGYKPRVQLSSSKMNI 231 Query: 234 IINSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISY-NKSSLNNL 287 I++S+ +TD+L L + D + +I E PS + Y NKS N L Sbjct: 232 ILSSLELTDMLLPCSKLLAKTLSDRFRIIDIDPELEQPSSDFALIYANKSRRNPL 286 >UniRef50_A8IJ97 Putative transcriptional regulator n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8IJ97_AZOC5 Length = 324 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 64/288 (22%), Positives = 117/288 (40%), Gaps = 8/288 (2%) Query: 3 NLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGK 62 +L +++FD LL++F + + AA L +T S VS +L+RLR DPLF R Sbjct: 4 DLNHIRRFDGALLLVFRELMATGQTTAAARRLGLTQSTVSHALRRLRDLTGDPLFQRRPD 63 Query: 63 GIAPTTTGLNLHHHLEKNLR---GLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRC 119 G+ PT L + + LR L+ + + ++F I GP ++S L Sbjct: 64 GLTPTPRAHELLPIVVEMLRLSQALKGEPGEFDPAASTRHFRIAGPDIVSTVLAGPLAHR 123 Query: 120 LRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSN 179 Q + ++ A A E L + D+ I P + R L I Sbjct: 124 FAQHAPNARLSFGFIVGA-AALEALRRGEIDMAIGHFPSVPRGFAASTLWEEEFVAIARK 182 Query: 180 RHPRITDNSTYEQIMAEE-FTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSI 238 HPR + A+ + GV D ++ + R++ L++ +++ Sbjct: 183 GHPRFPPLDLAGYLAADHVLVSFSGRFTGVVDRVLQ--PLGLARRVVASFPLFLSVFDAV 240 Query: 239 AVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNN 286 A +D + VPY L + + L + + +P + +S ++ + + Sbjct: 241 AQSDAVAAVPYSLCERHAETFGLARLPMPIAVPGFPI-VSVRRAGVPD 287 >UniRef50_P10183 HTH-type transcriptional activator nahR n=67 Tax=Bacteria RepID=NAHR_PSEPU Length = 300 Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 78/314 (24%), Positives = 130/314 (41%), Gaps = 40/314 (12%) Query: 6 DLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIA 65 +L+ DLNLLV+F + +S AE+L +T AVS +L+RLR DPLF+R+ +G+ Sbjct: 2 ELRDLDLNLLVVFNQLLVDRRVSITAENLGLTQPAVSNALKRLRTSLQDPLFVRTHQGME 61 Query: 66 PT----------TTGLN-----LHHHLEKNLRGLEQTINIVNKSELKKNFIIYGPQLISC 110 PT T+ ++ L HH + E+T + + F+ +++ Sbjct: 62 PTPYAAHLAEPVTSAMHALRNALQHHESFDPLTSERTFTLAMTDIGEIYFMPRLMDVLAH 121 Query: 111 SNNSMLIRCLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHT 170 + +I +R DSS+ LM A L + DL + +P + L Sbjct: 122 QAPNCVISTVR-DSSMS------LMQA------LQNGTVDLAVGLLPNLQTGFFQRRLLQ 168 Query: 171 IRNTLICSNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSS 230 +C HP + T E+ + ++I+ G ++ + + R I Sbjct: 169 NHYVCLCRKDHPVTREPLTLERFCSYGHVRVIAAGTGHGEVDTYMTRVGIRRDIRLEVPH 228 Query: 231 LLTIINSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHP--LPSIKL----YISYNKS-- 282 + + + TDLL VP L + + L L HP LP I + + Y+K Sbjct: 229 FAAVGHILQRTDLLATVPIRLADCCVEPFGLS--ALPHPVVLPEIAINMFWHAKYHKDLA 286 Query: 283 --SLNNLVFSRFID 294 L L+F F D Sbjct: 287 NIWLRQLMFDLFTD 300 >UniRef50_UPI0001B54141 LysR family transcriptional regulator n=1 Tax=Streptomyces sp. C RepID=UPI0001B54141 Length = 298 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 33/102 (32%), Positives = 57/102 (55%), Gaps = 3/102 (2%) Query: 10 FDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTT 69 DLNLL + + + Q S+++AAE L +P+AVS++L RLR DPL +R+G+G+ PT Sbjct: 1 MDLNLLRVLDALLQENSVTRAAERLGTSPAAVSRTLARLRRTVGDPLLVRAGQGLVPTPR 60 Query: 70 GLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLI 108 + L + +RG + + + L++ F + L+ Sbjct: 61 AVELREEVGALIRGCDNVLRPGAGFDAVHLQRTFTVQATDLL 102 >UniRef50_Q5DZ29 Transcriptional regulator, LysR family n=2 Tax=Vibrio fischeri RepID=Q5DZ29_VIBF1 Length = 287 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 75/296 (25%), Positives = 124/296 (41%), Gaps = 28/296 (9%) Query: 11 DLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTTG 70 DLNL+ F +YQ S +KA+E L +T AVS +++RL ++ LFI+ G+GI T+ Sbjct: 2 DLNLVRTFMAVYQCQSYTKASELLMLTQPAVSAAIKRLESEIGKQLFIKKGRGIEATSKA 61 Query: 71 LNLHHHLEKNLRGLEQTIN-IVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSVEIE 129 H L + TIN VN K +Y ++I S V +E Sbjct: 62 ----HALATKFQFALDTINDAVND---KNTLSVYCAEIIL-------------HSLVGLE 101 Query: 130 CHDILMSAENAEELLVH---RKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRITD 186 + S + L H +K DLV+ + + + + ++C+ HPRI Sbjct: 102 QINFAESPRSQSMLFEHLREQKVDLVLDVATMKDSAFVIEDAYVEPLVVVCAKNHPRIQG 161 Query: 187 NSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLGI 246 T E + G++ + E R I+ SSL +++ ++ D LG+ Sbjct: 162 ELTKVDYYRESHVIYSALWQGMNGFEQIAQEPVEERNIALTVSSLSSVLMFVSQGDSLGL 221 Query: 247 VPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNN----LVFSRFIDRLNE 298 V + LNL L + K Y+K +N+ V + ID+L++ Sbjct: 222 VSQSFAKRWEKQLNLAIYPCPVKLDNAKYKFIYHKRYINDPQHRKVRQQIIDKLSK 277 >UniRef50_A9F1C1 Transcriptional regulator, LysR family n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9F1C1_SORC5 Length = 303 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 35/84 (41%), Positives = 53/84 (63%), Gaps = 1/84 (1%) Query: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 M+ +Y + DLNLL +F + + S+++AA LY+T AVS +L+RL A PLF+RS Sbjct: 1 MSEIYGIN-LDLNLLRVFAVVAEAGSVTEAASRLYLTQPAVSAALRRLTATIGAPLFVRS 59 Query: 61 GKGIAPTTTGLNLHHHLEKNLRGL 84 G+G+A T+ G L L+ +L L Sbjct: 60 GRGVALTSRGERLRASLKPHLGAL 83 >UniRef50_B0KG68 Transcriptional regulator, LysR family n=9 Tax=Pseudomonas RepID=B0KG68_PSEPG Length = 324 Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 29/66 (43%), Positives = 45/66 (68%) Query: 3 NLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGK 62 N +L+K D+NL+V+FE + Q ++++AAE L++ VS +L RLRA FNDPL +R G Sbjct: 17 NRNELRKADINLMVVFEALMQERNLTRAAEKLFVAQPTVSAALARLRAMFNDPLLVRVGN 76 Query: 63 GIAPTT 68 + P+ Sbjct: 77 RMEPSA 82 >UniRef50_A1UYG7 Transcriptional regulator, LysR family n=45 Tax=Burkholderia RepID=A1UYG7_BURMS Length = 439 Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 30/77 (38%), Positives = 48/77 (62%) Query: 9 KFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTT 68 + DLNL + + +Y IS AA +L++T AV+ +L RLRA F DPLF+R G + PT Sbjct: 137 RLDLNLFRVLDAVYVQGGISAAARALHLTQPAVTHALNRLRAHFGDPLFVRQGNKVVPTE 196 Query: 69 TGLNLHHHLEKNLRGLE 85 + ++++L+GL+ Sbjct: 197 RTREVIADVQRHLKGLQ 213 >UniRef50_D1SW87 Transcriptional regulator, LysR family n=1 Tax=Acidovorax avenae subsp. avenae ATCC 19860 RepID=D1SW87_9BURK Length = 330 Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 32/79 (40%), Positives = 50/79 (63%) Query: 11 DLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTTG 70 DLNL ++F+ I+ S++ A E L +T SAVS +L+R+R +FND LF+RS +G+ PT Sbjct: 7 DLNLFLVFQAIFATRSVTLAGERLGMTQSAVSNALKRMRERFNDVLFVRSAEGMVPTPLA 66 Query: 71 LNLHHHLEKNLRGLEQTIN 89 L +E+ L Q ++ Sbjct: 67 ERLIGPVEEGLAAFSQAVD 85 >UniRef50_C4KB22 Transcriptional regulator, LysR family n=37 Tax=Betaproteobacteria RepID=C4KB22_THASP Length = 333 Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 65/292 (22%), Positives = 125/292 (42%), Gaps = 28/292 (9%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 L+ FDLNLL + +Y+ S+S+AAE L ++ VS +L RLR +PLFI++ G+ P Sbjct: 24 LRDFDLNLLRVLLAVYEAGSVSRAAEHLGLSQPTVSSALGRLRRALGEPLFIKTASGVTP 83 Query: 67 TTTGLNLHHHLEKNLRGLEQTINIVNKSELKK------------NFIIYGPQLISCSNNS 114 T L L LE + ++ + K +++ P+++ Sbjct: 84 TARTHALASSARAMLARLETDFFVADRFDPAKYEGNLTVALSDVGELVFLPRILDSVRRL 143 Query: 115 MLIRCLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNT 174 + L SV + +++ + E+ E DL I P + + + + Sbjct: 144 APLAML---DSVTLAPGELMRAMEDGE-------VDLAIGYYPDLDAAGFYRE-KLLDHR 192 Query: 175 LICSNR--HPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLL 232 +C R HP + E+ ++ E + +K + + ++ + R+I R + Sbjct: 193 FVCLLRADHPVQDRQLSLERFLSLEHAAVRAKGRSQEIFEKYLERLRIQRRIVLRTPHFM 252 Query: 233 TIINSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPL--PSIKLYISYNKS 282 ++ I +DL+ +P+ + Y + K E PL P I+LY +++ Sbjct: 253 SLPGIIGRSDLVVTLPHAI-GHYFTRVGEKVRMAEPPLAIPHIELYQHWHRG 303 >UniRef50_A3RSL5 Transcriptional regulators, LysR family n=4 Tax=Ralstonia solanacearum RepID=A3RSL5_RALSO Length = 304 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 69/289 (23%), Positives = 125/289 (43%), Gaps = 25/289 (8%) Query: 8 KKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPT 67 K+ DLNLL +F+ IYQ +++ AA+ IT A+S +L RLR F DPLF+ S G+ PT Sbjct: 4 KRLDLNLLGVFQAIYQTRNVTLAAKRHNITQPAMSNALARLREVFADPLFVPSPYGMRPT 63 Query: 68 TTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDS 124 L +++ LR +EQ + + + + + F ++ + L+ LR + Sbjct: 64 PYAQQLAVPIDRALREVEQALAMSKGFDPASSDREFRMHLTDFAQVAFLPALLERLRALA 123 Query: 125 S-----VEIECHDILMSAENAEELLVHRKADLVITQM-PVISRSVICMPLHTIRNTLICS 178 VE + ++ A + L D +M + V L R ++ Sbjct: 124 PRVVIRVEALAEETILPALDEGRL------DFAFGRMSKAAGQGVGRYTLFKDRYAVLMR 177 Query: 179 NRHPRITDNSTYEQIMAEEFTQLISKSA--GVDDIQMEIDERFMNRKISFRGSSLLTIIN 236 HP + ++ + A LI S ++D+ ++ M I+ R S L + Sbjct: 178 AGHP-LAGHALSRKDFAAAGQALICTSGHRAIEDVLVK-----MGAHIALRLPSFLVVSR 231 Query: 237 SIAVTDLLGIVPYELYN--SYRDFLNLKEIKLEHPLPSIKLYISYNKSS 283 + +DL+ IVP L + + + + P + L+ S ++S+ Sbjct: 232 IVETSDLMVIVPARLAEQCAATGLFHTAALPVAMPAFDVSLFWSESRSA 280 >UniRef50_C5CZA2 Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus S110 RepID=C5CZA2_VARPS Length = 317 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 32/84 (38%), Positives = 52/84 (61%) Query: 6 DLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIA 65 ++ DLNL ++F+ IY S++ A + L +T SAVS +L+R+R +FND LF+RS G+ Sbjct: 2 NINSIDLNLFLVFQAIYATRSVTLAGDRLGMTQSAVSNALKRMRERFNDALFVRSADGMV 61 Query: 66 PTTTGLNLHHHLEKNLRGLEQTIN 89 PT L +E+ + L Q ++ Sbjct: 62 PTPVAERLIAPIEEGIACLVQAVD 85 >UniRef50_Q89IY7 Transcriptional regulatory protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89IY7_BRAJA Length = 307 Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 32/83 (38%), Positives = 48/83 (57%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 + DLNLL +FE + S+++AA +L +T AVS +L RLR DPLF+RSG GI P Sbjct: 5 FRALDLNLLKVFEALMTEGSVTRAASALTMTQPAVSNALARLRDALGDPLFVRSGTGIRP 64 Query: 67 TTTGLNLHHHLEKNLRGLEQTIN 89 T + L + + L + ++ Sbjct: 65 TQRAVVLWEPIGEALESVRGALD 87 >UniRef50_Q7D3Y4 Transcriptional regulator, LysR family n=3 Tax=Proteobacteria RepID=Q7D3Y4_AGRT5 Length = 317 Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 33/91 (36%), Positives = 54/91 (59%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 ++L+ FDLNLLV F+ + + +S+++AA L I A+S ++ LR F D LFIR G+ + Sbjct: 7 FNLRSFDLNLLVAFDAMMEEMSVTRAARRLKIQQPAMSHNISTLRTLFQDELFIRVGQIM 66 Query: 65 APTTTGLNLHHHLEKNLRGLEQTINIVNKSE 95 PT LNL + + LR + + + + E Sbjct: 67 KPTARALNLSGPVRQALRQAQAAVLMADAFE 97 >UniRef50_B0C7Y6 Transcriptional regulator, LysR family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C7Y6_ACAM1 Length = 305 Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 69/278 (24%), Positives = 126/278 (45%), Gaps = 35/278 (12%) Query: 9 KFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTT 68 + DLNLL IFE + L++S+AAE L +T AVS +L+RLR ND LF++ G++PT Sbjct: 4 QIDLNLLHIFEAVMMELNVSRAAERLNMTQPAVSHALRRLRRITNDELFLKVPSGVSPTP 63 Query: 69 TGLNLHHHLEKNLRGLE-----------QTINIVNKSELKKNFIIYGPQLISCSNNSMLI 117 L L + + L + ++ + + ++ P+L+ + Sbjct: 64 KALELWGPIREGLVHIRLALSPPSFEPFSSMQTFTLAMADYSVALFLPKLLPILAH---- 119 Query: 118 RCLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTI---RNT 174 S+ I + + NA +LL + DL + + RS + + + I R Sbjct: 120 ------SAPNINIRIVPNTNINAAKLLEQSEIDLAMGR---FYRSTVRLRVQEIIGDRYI 170 Query: 175 LICSNRHPRITDNSTYEQIMAEE--FTQLISKSAGVDDIQM-EIDERFMNRKISFRGSSL 231 I HP T +Q + + L ++ G+ D Q+ E+D ++R+I+ + Sbjct: 171 CIMRKDHPLAHKRLTLKQYIKADHLLVTLTGEATGLVDKQLREMD---LSRRIALTVNQF 227 Query: 232 LTIINSIAVTDLLGIVPYELY--NSYRDFLNLKEIKLE 267 + IA +DL+ +P + N +R L++ E+ L+ Sbjct: 228 TLVPELIAGSDLISAIPLRMVERNPFRTDLHITELPLK 265 >UniRef50_A1U796 Transcriptional regulator, LysR family n=3 Tax=Marinobacter RepID=A1U796_MARAV Length = 303 Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 32/74 (43%), Positives = 44/74 (59%) Query: 6 DLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIA 65 D+ DL L F + S+S+AA L +T SAVS +L+RLR F DPLF++SG+GI Sbjct: 5 DMLSLDLRSLATFVAVLDEGSVSRAAVRLGVTQSAVSHTLERLRQAFGDPLFVKSGRGIV 64 Query: 66 PTTTGLNLHHHLEK 79 PT L H+ + Sbjct: 65 PTDYALRTGPHIRQ 78 >UniRef50_C3KKF8 Putative transcriptional regulatory protein, LysR-family n=1 Tax=Rhizobium sp. NGR234 RepID=C3KKF8_RHISN Length = 304 Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 63/290 (21%), Positives = 119/290 (41%), Gaps = 28/290 (9%) Query: 6 DLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIA 65 ++ DLNLLV+F+ + ++AAE + +T AVS +L RLRA F DPLF+RS +G+ Sbjct: 5 NIASIDLNLLVVFDALVAEGHATRAAERIGLTQPAVSHALNRLRALFGDPLFVRSPRGMV 64 Query: 66 PTTTGLNLHHHLEKNLRGLEQTIN---IVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQ 122 T L+ + L +E ++ E + F+ + S+ + + R Sbjct: 65 ATPAALDAAPAIRSILEQVEVVLSGGPAFEPEESTRQFV------LGLSDYAAFVLLPRL 118 Query: 123 DSSVEIECHDILMSAENAE-----ELLVHRKADLVITQMPVISRSVICMPLHTIRNTL-- 175 + +E E +I + N +L +L+ P P H L Sbjct: 119 TARLEREAPNISLVIRNTSHGVGLPMLEEGSVELIAGNFP-------GPPSHMREELLYE 171 Query: 176 ---ICSNR--HPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSS 230 +C+ R HP + ++ ++ Q+ ++ + + ER + RK++ Sbjct: 172 EDFVCAGRGDHPALAYPLDLDRYLSLRHLQVSTRGNPHGYVDAVLAERGLKRKVAVTVGH 231 Query: 231 LLTIINSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYN 280 L + +DL+ P L+ L L+ LP ++ +++ Sbjct: 232 FLMAPFLVDSSDLVATEPRRLFEPMPSRLPLRFFAPPIDLPPFRVVQAWH 281 >UniRef50_A1K8D7 Transcriptional regulator, LysR family n=1 Tax=Azoarcus sp. BH72 RepID=A1K8D7_AZOSB Length = 298 Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 33/84 (39%), Positives = 52/84 (61%) Query: 6 DLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIA 65 +++ DLNLL IFE +Y ++S+AA L +T +VS L RLR F DPLF+R+ G+ Sbjct: 2 NIQSVDLNLLKIFEAVYLERNVSRAAVRLELTQPSVSHGLTRLRLLFGDPLFVRTRSGVE 61 Query: 66 PTTTGLNLHHHLEKNLRGLEQTIN 89 PT + +++ LR L+ T++ Sbjct: 62 PTVVADRIAGPVQQALRVLQTTLD 85 >UniRef50_Q5E5X9 Transcriptional regulator, LysR family n=2 Tax=Vibrio fischeri RepID=Q5E5X9_VIBF1 Length = 312 Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 70/257 (27%), Positives = 113/257 (43%), Gaps = 30/257 (11%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 + + + DLNLL +F + + + KA+E L+++ VS++L RLR F D LFIRS G+ Sbjct: 3 HKIHQLDLNLLKVFTVLLEVRNTRKASERLFLSQPGVSRALARLRDFFEDELFIRSHYGL 62 Query: 65 APTTTGLNLHHHLEKNLRGLEQTINIVNK---SELKKNFIIYGPQLISCSNNSMLIRCLR 121 PT L + ++ + L + +K S+L+ I I+ S S L Sbjct: 63 TPTPKALEIGDNIAPAMTLLFSALEPSDKFDSSQLEGRINIAMNGFIAPSIASNL----- 117 Query: 122 QDSSVEIECHDILMSAENAE-----------ELLVHRKADLVITQMPV-ISRSVICMPLH 169 C IL A N E E ++H + L + P+ IS+ + L Sbjct: 118 --------CGIILEKAPNVEVVFSNWDRATPENILHDQIQLGLNYFPLEISKQLSQSVLT 169 Query: 170 TIRNTLICSNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNR--KISFR 227 T R LI HP IT ++E + L+ + + + +N+ ++ R Sbjct: 170 TDRFVLIGRKEHPLITGEESFENAAQLDIATLVIPNWNEHKAYVVNSLKSLNKECRMRLR 229 Query: 228 GSSLLTIINSIAVTDLL 244 S L I+NSI TD+L Sbjct: 230 SSYLDVILNSIQRTDML 246 >UniRef50_A6EW06 Transcriptional regulator n=2 Tax=Marinobacter RepID=A6EW06_9ALTE Length = 315 Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 55/252 (21%), Positives = 113/252 (44%), Gaps = 19/252 (7%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 +K +L LL IF+ I S+++AA+ L +T AVS ++ R+R +NDPLF+R G+ I P Sbjct: 1 MKTQELQLLYIFDAIMTERSVTRAADRLAMTQPAVSNAISRMRQIWNDPLFVRKGRNIEP 60 Query: 67 TTTGLNLHHHLEKNLRGLEQTINIV--NKSELKKNFIIYGPQLISCSNNSMLIRCLRQDS 124 T+ L+L + + L ++ + + ++ F I +I LI L +++ Sbjct: 61 TSYALSLWDQVGDPMFALTNAVSATQFDPASARRTFRIAVTDVIVEMIWRQLIDLLEREA 120 Query: 125 SVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNR---- 180 ++ H + + E + + L DL I V+ +++R+T + + Sbjct: 121 P-GVDVHAVPYTPEGSYDDLRSAHVDLAI--------GVLNQHDYSLRSTWLLDSGFVLA 171 Query: 181 ----HPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIIN 236 HP T E+ + + + +D++ +R+I+ + ++ Sbjct: 172 MRADHPLAGRQITMEEFLEARHLLVTMSGDAHGSVDSYLDQKGQSRRIAATMNHFASVPQ 231 Query: 237 SIAVTDLLGIVP 248 + ++L+ VP Sbjct: 232 VLRESNLIAAVP 243 >UniRef50_Q9RH96 LeuO homolog (Fragment) n=28 Tax=Salmonella enterica RepID=Q9RH96_SALTY Length = 100 Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 30/88 (34%), Positives = 55/88 (62%) Query: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 M + + KK D NL+ +F+ + + ++AA L +TP+A+SQ+L RL+ + + LFIR+ Sbjct: 1 MRPIKNAKKIDYNLIKVFDTVITEGNATRAARKLDVTPAAISQALLRLQNLYGEELFIRT 60 Query: 61 GKGIAPTTTGLNLHHHLEKNLRGLEQTI 88 KG+ P++ G +LH + + +E T+ Sbjct: 61 RKGLVPSSKGKSLHQVFRQAIESIESTL 88 >UniRef50_Q9FD34 PnbR n=2 Tax=Pseudomonas RepID=Q9FD34_PSEPU Length = 348 Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 68/307 (22%), Positives = 129/307 (42%), Gaps = 34/307 (11%) Query: 9 KFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTT 68 K DLNL+ +F+ + + S+ +A++ L+++ SAVS +L RLR +F+R+GKG++PT+ Sbjct: 25 KLDLNLIRVFDAVMEERSVLRASQRLHLSQSAVSHALSRLREGLGQEIFVRTGKGMSPTS 84 Query: 69 TGLN----LHHHLEKNLRGLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDS 124 L LH L + L Q + + ++F+I +S + L+ L Sbjct: 85 YALEISGALHAALLSMSKALSQAATPFSPQSVCRSFVIAANDYVSAT----LLPQLNHQL 140 Query: 125 SVEIECHDILMSAEN----AEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNR 180 S D+ ++ AE++ + R D+ I + P+ ICS Sbjct: 141 SKVAPGIDLQITPATRLDLAEQIDLGR-IDVAIGTFRSVPERFRTKPVLFQDEVFICSGT 199 Query: 181 HPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKIS-FRGSSLLTIINSIA 239 HP + + ++ + G + I ER + R+ + ++L +N Sbjct: 200 HPISANKPQLQDLVRYPLAVVSLGGEGEGMLSGYILERGLARQAQMYDRTALEQALNEAG 259 Query: 240 V--------------------TDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISY 279 + ++LL IVP L ++ L K L +P +L + + Sbjct: 260 LSMRRQIVLPHFLALPMLLEGSELLAIVPQPLARTFARTLGFKIKPLPYPAARQQLDLIW 319 Query: 280 NKSSLNN 286 + S+ N+ Sbjct: 320 HSSNDND 326 >UniRef50_C9NTB9 LysR-like transcriptional regulator n=5 Tax=Vibrionales RepID=C9NTB9_9VIBR Length = 314 Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 37/121 (30%), Positives = 65/121 (53%), Gaps = 16/121 (13%) Query: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 M++ + ++ DLNLL+ F+ +Y+H S+S AA+ L++ A S +L+RLR +DPLF R Sbjct: 1 MSDNINWRRVDLNLLLTFDALYKHRSVSAAAKHLHLGQPATSYNLKRLRELLDDPLFERG 60 Query: 61 GKGIAPTTTGLNLHHHLEKNLRGLEQTINIVNKSELKKNFI--------------IYGPQ 106 G + PTT + + + + L Q +I+ K+ + + +YGP+ Sbjct: 61 GSSMTPTTRAMEIEPKVRQILSIFSQ--DIMPKAAFEADSFDGTFKIGLSDYAEQVYGPE 118 Query: 107 L 107 L Sbjct: 119 L 119 >UniRef50_B6R1K2 Transcriptional regulator, LysR family n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R1K2_9RHOB Length = 293 Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 54/207 (26%), Positives = 101/207 (48%), Gaps = 25/207 (12%) Query: 11 DLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTTG 70 DLNLL++FE +Y ++++A++ L +T AVS +L+RLR F DPLFIR+ G+ PT Sbjct: 2 DLNLLLVFEAVYSERNLTRASKRLNLTQPAVSNALRRLRDTFQDPLFIRTADGMVPTD-- 59 Query: 71 LNLHHHLEKNLRGLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSVEIEC 130 L + L G +++ E+ ++F S S L +D + I Sbjct: 60 ------LAEQLAG-----RVLDALEMLRSF---------ESRESFDPAGLSRDFRISISD 99 Query: 131 HDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRITDNSTY 190 ++ ++ + L + + IT I R+ + L T + L+ + + + N +Y Sbjct: 100 YNGMLVLPRLLKELAEQAPGVSIT-TSQIQRAHVSEHLSTGQVDLVLAPK--QDVANLSY 156 Query: 191 EQIMAEEFTQLISKSAGVDDIQMEIDE 217 E + ++++ + S G + QM ++E Sbjct: 157 EPLYSDDYVGVASAHYGPEGGQMSLEE 183 >UniRef50_B7VQM7 Transcriptional regulators, LysR family protein n=3 Tax=Vibrio RepID=B7VQM7_VIBSL Length = 308 Score = 66.6 bits (161), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 55/200 (27%), Positives = 94/200 (47%), Gaps = 8/200 (4%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 L DLNLL +F +YQ S+ KAAE L+++ AVSQS+++L+ + LF+ S K P Sbjct: 3 LNNVDLNLLKVFVVVYQEKSLRKAAEKLFVSTPAVSQSVKKLKESLGEELFVLSNKQFLP 62 Query: 67 TTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYG-PQLISCSNNSMLIRCLRQ 122 T L+ + L GL I +EL ++F I P L+ S+ + + Sbjct: 63 TPYSDELYRRVFPLLDGLVTAIEEGKQFTPAELSEDFKIEANPHLLPWLTPSLFHQLSDE 122 Query: 123 DSSVEIECHDILMSAENAEELLVHRKADLVIT-QMPVISRSVICMPLHTIRNTLICSNRH 181 + H S++++ E L + D VI + + +I +PL T++ L H Sbjct: 123 SPLSRLISH---TSSQDSLERLKSDEIDFVIHFEAENLPAEIIAVPLVTLKFVLAVRVDH 179 Query: 182 PRITDNSTYEQIMAEEFTQL 201 P D + + +++ F + Sbjct: 180 PFKEDVAQIDDLLSFPFAHV 199 >UniRef50_A6V5Q0 MexT protein n=1 Tax=Pseudomonas aeruginosa PA7 RepID=A6V5Q0_PSEA7 Length = 308 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 32/79 (40%), Positives = 48/79 (60%) Query: 3 NLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGK 62 N+ ++ + DLNLL+ F C+ S ++AA L++T AVS +L+RLR F D LFIRS Sbjct: 5 NVRNIARIDLNLLLTFHCLMSERSATRAAVVLHVTQGAVSAALRRLREHFGDELFIRSAS 64 Query: 63 GIAPTTTGLNLHHHLEKNL 81 G+ PT + L + + L Sbjct: 65 GMQPTRKAMELAPRIAEAL 83 >UniRef50_A6W1I8 Transcriptional regulator, LysR family n=2 Tax=Marinomonas RepID=A6W1I8_MARMS Length = 326 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 34/72 (47%), Positives = 45/72 (62%) Query: 3 NLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGK 62 +L D+ K D+ LLV F I + S+S+AAE L +T A+S+SLQRLR F D LF R Sbjct: 2 HLDDILKLDIKLLVAFVTIMEEGSVSRAAERLGVTQPALSKSLQRLRELFKDSLFTRQAY 61 Query: 63 GIAPTTTGLNLH 74 G++PT LH Sbjct: 62 GLSPTARASELH 73 >UniRef50_C0ZNV8 Putative LysR family transcriptional regulator n=1 Tax=Rhodococcus erythropolis PR4 RepID=C0ZNV8_RHOE4 Length = 298 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 67/278 (24%), Positives = 121/278 (43%), Gaps = 12/278 (4%) Query: 10 FDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTT 69 DLNLL +F+ + S++ AAE L ++ A S++L RLR +DP+F+R+G+G+ PT Sbjct: 5 MDLNLLRVFDALVAEGSVTGAAERLNLSIPATSRALGRLRRAMDDPIFVRAGRGLVPTPF 64 Query: 70 GLNLHHHLEKNLRGLEQTINIVNK----SELKKNFIIYGPQLISCSNNSMLIRCLRQDSS 125 L + L G Q + I K +EL++ F+I + + S L+R ++ Sbjct: 65 ALRAAPQVRSLLEG-AQGLLIDRKNFEPAELERTFVIRINEGTAASLTPALVRRFAAEAP 123 Query: 126 VEIECHDILMSAENAEEL--LVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPR 183 + I E E++ L + DL I P+ S V L+ + + S P Sbjct: 124 NAV----IRCVGEGNEDVDSLRNGSIDLDIGADPLPSSDVCSEILYREGHVGLVSKSSPL 179 Query: 184 I-TDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTD 242 T T Q+ + I + M R++ +S + A +D Sbjct: 180 ARTAQPTLAQLCEHPHVSTSRRGRTHGPIDDALSAVGMRRRVIAVVASPVAAALMAADSD 239 Query: 243 LLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYN 280 L+ +VP L + L++ + LP++ ++ ++ Sbjct: 240 LVALVPERLARYFAARLDVAWFAVPTELPAVTIHQQWH 277 >UniRef50_A0Z258 Transcriptional regulator, LysR family protein n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z258_9GAMM Length = 313 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 32/65 (49%), Positives = 44/65 (67%) Query: 3 NLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGK 62 ++ L K DLNLLV + + + S+S AA + IT A+S++L RLR FNDPLF+RS + Sbjct: 2 DIKKLSKVDLNLLVSLQILLEECSVSSAARRMSITQPAMSKTLGRLRDTFNDPLFVRSKR 61 Query: 63 GIAPT 67 GI PT Sbjct: 62 GIQPT 66 >UniRef50_Q1T7B6 Putative LysR-type transcriptional activator n=1 Tax=Pseudomonas sp. HI-70 RepID=Q1T7B6_9PSED Length = 312 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 33/87 (37%), Positives = 52/87 (59%) Query: 3 NLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGK 62 + DL++ DLNLL+ F+ IY SI++AAE + ++ A+S +L RLR+ D LFI+S + Sbjct: 8 TMIDLRQIDLNLLLAFDAIYAQRSITRAAEVMCLSQPAMSNALSRLRSLSGDRLFIKSHR 67 Query: 63 GIAPTTTGLNLHHHLEKNLRGLEQTIN 89 G+ PT L H+ L L + + Sbjct: 68 GVTPTMVAHRLADHVRNALDSLREGLR 94 >UniRef50_B9Z7Z3 Transcriptional regulator, LysR family n=3 Tax=Proteobacteria RepID=B9Z7Z3_9NEIS Length = 324 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 34/111 (30%), Positives = 59/111 (53%), Gaps = 12/111 (10%) Query: 11 DLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTTG 70 D NLLV + + S+++AA L ++PSA+S++L RLR DPL +R+G+G+ PT Sbjct: 5 DFNLLVTLDVLLAEGSVARAARRLRLSPSAMSRALARLRETTGDPLLVRAGRGLVPTPRA 64 Query: 71 LNLHHHLEKNLRGLEQTINIVNK---SELKKNFII---------YGPQLIS 109 L L + + ++ + K ++L + F + +GP LI+ Sbjct: 65 LELREQVSQLVQDAAAVLRPAEKLDLTQLVRTFTLRVGDGFVENFGPSLIA 115 >UniRef50_Q7VQS7 LysR-family transcriptional regulator n=2 Tax=Candidatus Blochmannia RepID=Q7VQS7_BLOFL Length = 307 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 58/247 (23%), Positives = 124/247 (50%), Gaps = 11/247 (4%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 + FD NLLV+ + + S++ AA+ L +T A+S+SL ++R FND + +RSG + P Sbjct: 1 MNNFDFNLLVVLNALLEDNSVNLAAKKLNVTAPAISKSLNKIRILFNDQILVRSGTKLTP 60 Query: 67 TTTGLNLHHHLEKNLRGLEQTIN---IVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQD 123 T + L +++ + +E IN + +F I I + N++L R ++ + Sbjct: 61 TPKAMALKENIKDLVNQIETLINSNIVFEPKYTNTSFTIASNSSIFFALNTILFRDIQSN 120 Query: 124 S-SVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHP 182 + ++ I +++ ++ ++ L + DL + +M ++ + ++ ++ LIC N HP Sbjct: 121 TPNIFI---NLVNDSDYDDDFLRNNTIDLYVGEMRSLNPEITIRTIYMSKSCLICRNHHP 177 Query: 183 RITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMN-RKISFRGSSLLTIINSIAVT 241 ++ + + ++ F Q + D E ++ F + R I +T IN++ + Sbjct: 178 ILSKHKNMDNLLKYPFIQTKHEYLINTD---ETNKYFWSERNIVGITPDYITTINAVTHS 234 Query: 242 DLLGIVP 248 ++L I+P Sbjct: 235 NILAIIP 241 >UniRef50_Q1XGL2 Transcriptional activator NahR n=3 Tax=root RepID=Q1XGL2_PSEPU Length = 374 Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 70/292 (23%), Positives = 121/292 (41%), Gaps = 32/292 (10%) Query: 6 DLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIA 65 +L+ DLNLLV+F + +S AE+L +T AVS +L+RLR DPLF+R+ +G+ Sbjct: 2 ELRDLDLNLLVVFNQLLVDRRVSITAENLGLTQPAVSNALKRLRTSLQDPLFVRTHQGME 61 Query: 66 PTTTGLNLHHHLEKNLRGLEQTIN---IVNKSELKKNF---------IIYGPQLISC--- 110 PT +L + + L + + ++ F I + P+L+ Sbjct: 62 PTPYAAHLAEPVTSAMHALRNALQHHESFDPLTSERTFTLAMTDIGEIYFMPRLMDVLAH 121 Query: 111 SNNSMLIRCLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHT 170 + +I +R DSS+ LM A L + DL + +P + L Sbjct: 122 QAPNCVISTVR-DSSMS------LMQA------LQNGTVDLAVGLLPNLQTGFFQRRLLQ 168 Query: 171 IRNTLICSNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSS 230 +C HP + T E+ + ++I+ G ++ + + R I Sbjct: 169 NHYVCLCRKDHPVTREPLTLERFCSYGHVRVIAAGTGHGEVDTYMTRVGIRRDIRLEVPH 228 Query: 231 LLTIINSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHP--LPSIKLYISYN 280 + + + TDLL VP L + + L L HP LP I + + ++ Sbjct: 229 FAAVGHILQRTDLLATVPIRLADCCVEPFGLS--ALPHPVVLPEIAINMFWH 278 >UniRef50_B7CP85 Transcriptional regulator, LysR family protein n=1 Tax=Burkholderia pseudomallei 576 RepID=B7CP85_BURPS Length = 305 Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 67/278 (24%), Positives = 116/278 (41%), Gaps = 45/278 (16%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 ++ DLNLL+ + + +SKAA+ +++ A+S+ LQRLR F D L +R+ G P Sbjct: 6 IRGADLNLLLAAFVLLEERQVSKAADRYHLSQPAMSRMLQRLRDTFGDELLVRTRGGFEP 65 Query: 67 TTTGLNLHHHLEKNLRGLEQTI--NIVNKSELKKNF---------IIYGPQLISCSNNSM 115 T G + H L + L L+ + + + +E + F I GP+L Sbjct: 66 TVRGRYILHELGELLPRLDALLRGGLFDPTEAEDTFRVACTDYATTILGPRLFE------ 119 Query: 116 LIRCLRQDSSVEIECHDILMSAENAEELLVHRKADLVIT--QMP-------VISRSVICM 166 R R+ +V + D++ ++A E + H + DLV+ ++P + +CM Sbjct: 120 --RVFREAPNVSM---DVVAWHDHAFEAIEHGRLDLVLWPNEVPDTLYSETLFEDDFVCM 174 Query: 167 PLHTIRNTLICSNRHPRITDNSTYEQIMAEEFTQLISKSAGVDD--IQMEIDERFMNRKI 224 S+ HP + F + G ++ + + + R Sbjct: 175 ----------MSSDHPSGDGPLVLRDYL--RFPHAVVSVLGGKQTIVEQRLHDMGVRRAA 222 Query: 225 SFRGSSLLTIINSIAVTDLLGIVPYELYNSYRDFLNLK 262 R S I +IA T L+ VP L YRD N++ Sbjct: 223 GLRVSYFSGAITAIARTALIATVPRRLAMLYRDRANIR 260 >UniRef50_Q2CK92 Transcriptional regulator, LysR family protein n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CK92_9RHOB Length = 309 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 26/213 (12%) Query: 6 DLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIA 65 +L+ D +L+IF + +H ++ A + +T AVS +L+RLR + DPLF+R G+ Sbjct: 8 NLRLIDTTVLLIFLSLMRHRKATEVAREMGLTQPAVSHALKRLRTLYEDPLFLRRAHGLE 67 Query: 66 PTTTGLNLHHHLEKNLRGLEQTINIVNK-------SELKKNFIIYG-----PQLISCSNN 113 PT L + + +R L QT+ ++ ++L+ Y P+L + Sbjct: 68 PTALAHELEPKIRRIVRLLSQTLENPDQFDPASTATDLRIGAFDYELTTVIPKLAAE--- 124 Query: 114 SMLIRCLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRS---VICMPLHT 170 +R L S I H + A + LVH + DL I + RS + L++ Sbjct: 125 ---MRTL----SPSINVHAYPLVYTEALDALVHGRLDLAIGYFDIPLRSEATFVVEDLYS 177 Query: 171 IRNTLICSNRHPRITDNSTYEQIMAEEFTQLIS 203 R L HP ++DN T E+ MA+ L+S Sbjct: 178 ERYVLAGRRGHPLLSDNPTLEE-MAQADHLLVS 209 >UniRef50_A1WMY5 Transcriptional regulator, LysR family n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WMY5_VEREI Length = 304 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 31/83 (37%), Positives = 52/83 (62%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 L++ DLNLLV F+ + + ++S+AAE L ++ SAVS +L+RLR F D L +R +G+ P Sbjct: 3 LRQIDLNLLVTFQALVEERNVSRAAERLALSQSAVSHALKRLRNTFQDELLVRGPRGMEP 62 Query: 67 TTTGLNLHHHLEKNLRGLEQTIN 89 T + L ++ L +E ++ Sbjct: 63 TPRAVTLAIAVKSGLATIETAVD 85 >UniRef50_Q2KYC5 LysR-family transcriptional regulator n=9 Tax=Burkholderiales RepID=Q2KYC5_BORA1 Length = 306 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 70/315 (22%), Positives = 127/315 (40%), Gaps = 45/315 (14%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 L+K DLNLLV+F+ + + +IS A L ++ AVS +L+RLR F D LF+R+ +G+ P Sbjct: 10 LRKLDLNLLVVFQHLLEERNISAVARRLDLSQPAVSNALRRLRLAFGDELFVRTAQGMLP 69 Query: 67 T----------TTGLNLHHHLEKNLRGL-----EQTINIVNKSELKKNFIIYGPQLISCS 111 T + L+L HL + ++ + I + +F+ P L+ Sbjct: 70 TPLAEGMGGQVSEALSLLSHLADAAQPFDPATSQRRLRIAMSDAGEIHFM---PTLMEL- 125 Query: 112 NNSMLIRCLRQDSSVEIE---CHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPL 168 C R V I+ C D+ + + DL + + ++ L Sbjct: 126 -------CARHVPGVRIDSLRCTDLQRELDTG-------RVDLALGAFDGLGSGIVQRML 171 Query: 169 HTIRNTLICSNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRG 228 + HPR + AE+ ++S++A I ++ + + F Sbjct: 172 FRQGYATLFRAGHPRAYAGMSARAFRAEQHL-VVSRAAPDGQINQALERAGVVLQEQFSV 230 Query: 229 SSLLTIINSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNK------- 281 + ++ TDLL VP +L S L+ + L +P ++ + +++ Sbjct: 231 PHFAAVPYIVSTTDLLATVPEKLAASAAPRFGLQVLTLPIKVPLLQTNLYWHRRFQRDGA 290 Query: 282 -SSLNNLVFSRFIDR 295 L L+ F DR Sbjct: 291 NQWLRGLIIDTFADR 305 >UniRef50_C6DDI5 Transcriptional regulator, LysR family n=4 Tax=Enterobacteriaceae RepID=C6DDI5_PECCP Length = 310 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 36/90 (40%), Positives = 52/90 (57%), Gaps = 3/90 (3%) Query: 6 DLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIA 65 D + DLNLLV F +Y+ S+S AA+ L++ AVS +L RLR F+DPLFIR+G+ + Sbjct: 4 DFRGVDLNLLVTFLVLYRERSVSVAADKLHLGQPAVSGALARLRTLFDDPLFIRTGQVMR 63 Query: 66 PTTTGLNLHHHLEKNLRGLEQTINIVNKSE 95 PT L L EQ +++ + E Sbjct: 64 PTARADYLATQLSP---AFEQLQSVLGEPE 90 >UniRef50_Q8XRG7 Probable transcriptional regulator transcription regulator protein n=1 Tax=Ralstonia solanacearum RepID=Q8XRG7_RALSO Length = 308 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 63/279 (22%), Positives = 116/279 (41%), Gaps = 12/279 (4%) Query: 10 FDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTT 69 DLNLL +FE I++ +++ E L ++ AVS+ L RLR + D LF+R +G+ PT Sbjct: 14 LDLNLLELFESIWRTRNLTATGERLGLSQPAVSRGLARLRETYGDELFVRHRRGVEPTAF 73 Query: 70 GLNLHHHLEKNLRGLEQTIN--IVNKSELKKNFIIYGPQLISCSNNSMLIR--CLRQDSS 125 L + L + +TI + +E + F + L L R D + Sbjct: 74 AQTLAEPVSAALAIVRRTIEKPTFSAAEDARRFRV---ALSDIGERYFLPRLAAWLADHA 130 Query: 126 VEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRIT 185 ++ + S E L + DL + +P + + V L + I HP I Sbjct: 131 PQVSIDTVSASREELLTGLASGEIDLAVGFLPGLGKQVHEKRLFQEKFVYIARRDHPGID 190 Query: 186 DNSTYEQIMAEEFTQLISKSAGVDD---IQMEIDERFMNRKISFRGSSLLTIINSIAVTD 242 Q+ A ++ G ++ + + ++ R S L+I +A +D Sbjct: 191 GRLQASQLRA--LPHVVGSPHGTQHAAAVEKVLTGPRVRAVVAMRVGSFLSIGPIVADSD 248 Query: 243 LLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNK 281 L+ +VP L + + L+ I PS ++ + +++ Sbjct: 249 LVAVVPSNLAALVSEHVGLQLIAPPVRFPSFEVSMVWHR 287 >UniRef50_B4RWU1 Transcriptional regulator n=2 Tax=Alteromonas macleodii RepID=B4RWU1_ALTMD Length = 347 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 34/102 (33%), Positives = 56/102 (54%), Gaps = 12/102 (11%) Query: 16 VIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTTGLNLHH 75 +IF+ I +I++AA+ L +T AVS +L R+R +ND LF++ G+GI PT+ NL Sbjct: 1 MIFDAIMTEGAITRAADRLSMTQPAVSNALSRMRTAWNDELFVKDGRGIQPTSFAKNLWS 60 Query: 76 HLEKNLRGLEQTINIV--NKSELKKNF----------IIYGP 105 ++ L LE +N N + K+ F +++GP Sbjct: 61 QIQGPLGELEVAVNPTDFNPASAKRTFRIAATDNIVSMVWGP 102 >UniRef50_A4SH82 Transcriptional regulator, LysR family n=2 Tax=Aeromonas RepID=A4SH82_AERS4 Length = 324 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 76/309 (24%), Positives = 133/309 (43%), Gaps = 32/309 (10%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 L + DLNLL +F+ + Q ++++AAE L+++ S VS +L RLR +DPLF+ S + + P Sbjct: 5 LSRLDLNLLTVFDMLMQERNVTRAAERLHLSQSTVSHALGRLRQALDDPLFVMSRREMMP 64 Query: 67 TTTGLNLHHHLEKNLRGLEQTINIV---NKSELKKNFIIYGPQLISCSNNSMLIRCL-RQ 122 T L + + L LEQ + + + ++ F I P + L+ L RQ Sbjct: 65 TERAKTLAGPVRQALAMLEQGLRQAEGFDPASARRIFRIATPGSVEHGLVPALVEQLHRQ 124 Query: 123 DSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHP 182 +E ++ S + E L + DLVI S N L+C + Sbjct: 125 APHCRLEVCELADS--DYERELEKGELDLVIGFADANHFSPRLWREPWFNNPLVCLS--- 179 Query: 183 RITDNSTYEQIMAEEFTQLISK----SAGVDDIQMEID---ERF-MNRKISFRGSSLLTI 234 S +++ +L+S+ ++ Q +D RF + R++ R S + + Sbjct: 180 --PLGSELPEVLGP--AELVSRPHIHTSSWGHSQAMVDLWLARFGVERELGVRLPSFMAV 235 Query: 235 INSIAVTDLLGIVPYELYNSYRDFLNLK------EIKL-----EHPLPSIKLYISYNKSS 283 +A L +VP + + + L+ EI + HPL + I + K Sbjct: 236 PPLMATGRYLVVVPEMIGRHFCRYYPLRLHQLNPEIPIVYLMAGHPLTAHDQAIGWFKGL 295 Query: 284 LNNLVFSRF 292 L+ L F R+ Sbjct: 296 LHRLAFERY 304 >UniRef50_A1SEI3 Transcriptional regulator, LysR family n=1 Tax=Nocardioides sp. JS614 RepID=A1SEI3_NOCSJ Length = 300 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 44/148 (29%), Positives = 76/148 (51%), Gaps = 9/148 (6%) Query: 11 DLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTTG 70 DLNLLV + + S+++AAE L + A+S +L RLR F D LF+R+G + PT G Sbjct: 7 DLNLLVALDALLTERSVTRAAERLSVGQPAMSATLGRLRKLFGDQLFVRTGGDMVPTAMG 66 Query: 71 LNLHHHLEKNLRGLEQTINIVNK---SELKKNFIIYGPQLISCSNNSMLIRCLRQDSSVE 127 L + + +R ++ +++V+ + ++ F + + +LIR L + SVE Sbjct: 67 QALVGPVTEAIRAVQAVLDVVDAFDPTTDRRTFTVMASDYVGL----VLIRPLVRRLSVE 122 Query: 128 I-ECHDILMS-AENAEELLVHRKADLVI 153 E I+ A + E ++ + DL I Sbjct: 123 APEVRLIVQPVAADYEAMIRQGRVDLAI 150 >UniRef50_B9B1S8 Transcriptional regulator, LysR family n=1 Tax=Burkholderia multivorans CGD1 RepID=B9B1S8_9BURK Length = 319 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 31/64 (48%), Positives = 42/64 (65%) Query: 10 FDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTT 69 DLNLL +F+ I + S++KA E L ++ AVS SL RLR F+DPLF+R+ G+ PT Sbjct: 20 LDLNLLRVFQAIVEERSLTKAGERLALSQPAVSYSLGRLRTLFDDPLFVRTRAGMQPTPV 79 Query: 70 GLNL 73 L L Sbjct: 80 ALEL 83 >UniRef50_A3JPL5 Transcriptional regulator, LysR family protein n=1 Tax=Rhodobacterales bacterium HTCC2150 RepID=A3JPL5_9RHOB Length = 302 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 68/300 (22%), Positives = 128/300 (42%), Gaps = 37/300 (12%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 YD+ D LL IF IY + S+S A +T S +S +L RLR ND LF++ G+GI Sbjct: 4 YDISHVDARLLKIFLSIYDNGSVSATALQFGVTQSTISHALDRLRDALNDTLFVKQGRGI 63 Query: 65 APTTTGLNLHHHLEKNLRGLEQTINIVNKSEL--KKNFII------YGPQLISCSNNSML 116 PT T +L + K + +E + + + K+ F I P+L++ +N M Sbjct: 64 GPTRTAEDLVPRIRKIVAQIEGLVEHFDYDPMADKQPFTITTNVAELTPELVNVRSNLMA 123 Query: 117 IRCLRQDSSVEIECHDIL---MSAENAEELLVHRKADL--VITQMPVISRSVICMPLHTI 171 I + +E+ L + + A+ L R + + + P +S ++ I Sbjct: 124 INPEQTLRFIELGSVGTLLPMLDEDRADVALSIRPKTIPAALERHPFLSDPMVVFFDPDI 183 Query: 172 RNTLI-----CSNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISF 226 R + C+ RH + S + I++ +D+ + RKI Sbjct: 184 RGPITSIEEYCNARHAALDFGSDKKSIVSS-----------------ALDKLSLTRKIQL 226 Query: 227 RGSSLLTIINSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNN 286 +++ ++ I TD++ + L++S +L+ LP +K + +++ N+ Sbjct: 227 GAANVYSLGQMIKGTDMIATMSARLFHSA--LSHLEHCPAPITLPPVKFDMFWHRRYSNS 284 >UniRef50_B5XW08 Transcriptional regulator, LysR family n=9 Tax=Enterobacteriaceae RepID=B5XW08_KLEP3 Length = 310 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 32/83 (38%), Positives = 49/83 (59%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 L++ DLNLL +F+ +Y+ S+ AAE L ++ SA+S +L RLR+ NDPLF R G + P Sbjct: 8 LRRIDLNLLPVFDAVYRSRSVRLAAEELAMSTSALSHALSRLRSALNDPLFYREGHRMCP 67 Query: 67 TTTGLNLHHHLEKNLRGLEQTIN 89 + L + L+ L Q + Sbjct: 68 SVYASQLAPSIASALKFLNQELT 90 >UniRef50_B4E7M9 LysR family regulatory protein n=1 Tax=Burkholderia cenocepacia J2315 RepID=B4E7M9_BURCJ Length = 299 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 59/218 (27%), Positives = 95/218 (43%), Gaps = 10/218 (4%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS--GKGI 64 +KK D+ LLV + + + ++++AA L I+ A+S L RLR +DPL + + G+G+ Sbjct: 1 MKKHDMGLLVSLDVLLEEANVTRAARRLAISQPALSAQLARLRQVLDDPLLVPAERGRGM 60 Query: 65 APTTTGLNLH---HHLEKNLRGLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 T L H L L L + + S K++F I + + LI C+R Sbjct: 61 RLTPRAAQLKSPLHELLTRLEDLVEAPYAFDPSTAKRDFTIALNDNAAMTIGLDLIECIR 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 + S I + + + +L + DLVI + + L R + H Sbjct: 121 KQSYAGIRLAMLQIPRDEVLDLAARGRIDLVIGTRAFMPPGLRTHDLVYDRFQVAQRKGH 180 Query: 182 PRITDNSTYEQIMAEEFTQLISKSA----GVDDIQMEI 215 PR T T EQ A E L+S + G+DD E+ Sbjct: 181 PRGTAAMTLEQYCAYEHV-LVSTNGSYHSGIDDFLAEL 217 >UniRef50_A5VEA0 Transcriptional regulator, LysR family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5VEA0_SPHWW Length = 309 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 71/308 (23%), Positives = 146/308 (47%), Gaps = 22/308 (7%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 L+ DLNLL+ + ++ ++++AAE + I+ +S +LQ+LR F+DPL R G+ + Sbjct: 3 LRGLDLNLLIALDALFTEKNVTRAAERINISQPGMSAALQKLRWHFSDPLLERVGRRMEL 62 Query: 67 TTTGLNLHHHLEK---NLRGLEQTINIVNKSELKKNFIIYGPQLISCSN---NSMLIRCL 120 T G L + + +R L + + ++ F I CS+ +L R Sbjct: 63 TVRGRALADPVREILIKVRDLTDKPEEFDPATARRVFRIGATTF--CSDILAAPLLCRIE 120 Query: 121 RQDSSVEIECHDILMSAENAEELLVHRKADLVIT-QMPVISRSV------ICMPLHTIRN 173 R ++ ++ D+ A + LV + D IT ++S V + L T Sbjct: 121 RIAPNISVQFEDL---ATDTVHRLVDGQLDFAITISARILSDEVNLDSSLSSLDLFTDAF 177 Query: 174 TLICSNRHPRITDNSTYEQIMAEEF--TQLISKSAGVDDIQMEIDERFMNRKISFRGSSL 231 L+ S ++ R+ D T++Q+ + T+ + AG+ + QM + + ++ + Sbjct: 178 VLVTSRQNSRVGDAVTFDQLCELPYIETRFGNVIAGISE-QMWRQQPKQPQIRAWLPNFQ 236 Query: 232 LTIINSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSR 291 LT +++++ TD++ IVP L + D N++ + + +P+I+ + +++ + + S Sbjct: 237 LT-LDTVSHTDMVAIVPLHLAQLHGDRYNVRTLPVPVEMPTIEERLFWHQRNDQDAGHSW 295 Query: 292 FIDRLNES 299 F L E+ Sbjct: 296 FKGLLQET 303 >UniRef50_A5F4D9 Transcriptional regulator, LysR family n=68 Tax=Gammaproteobacteria RepID=A5F4D9_VIBC3 Length = 327 Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 38/100 (38%), Positives = 57/100 (57%), Gaps = 10/100 (10%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 L + DLNLLV + + + LS+++AA L ++ SAVS+SL +LR QF+DPLF+R+ G+ Sbjct: 20 LARIDLNLLVCLKVLIEELSVTRAAARLCLSQSAVSKSLAKLREQFDDPLFVRTSYGLNA 79 Query: 67 TTTGLNLHHHLEKNLRGLEQTINIVNKSELKKNFIIYGPQ 106 T L L L+ +VN+ EL + PQ Sbjct: 80 TPKALFLKPKLDV----------LVNQLELLTQPAHFSPQ 109 >UniRef50_B0BQD1 HTH-type transcriptional activator n=15 Tax=Proteobacteria RepID=B0BQD1_ACTPJ Length = 299 Score = 64.3 bits (155), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 31/70 (44%), Positives = 43/70 (61%) Query: 4 LYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKG 63 + D++ DLNLL F+ + Q +++KAA+ L +T A+S L RLR F DPLF+R G Sbjct: 1 MRDIRTVDLNLLKAFDALLQERNVTKAAQRLSVTQPAMSAMLNRLRDSFGDPLFVRVQHG 60 Query: 64 IAPTTTGLNL 73 I PT L L Sbjct: 61 IEPTARALAL 70 >UniRef50_A4SSQ1 Transcriptional regulator, LysR family n=2 Tax=Aeromonas RepID=A4SSQ1_AERS4 Length = 322 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 30/65 (46%), Positives = 45/65 (69%) Query: 4 LYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKG 63 L L + DLNLL+I + + + + S+AA L+++ SAVS++L RLR F+DPLF+RS G Sbjct: 3 LEQLGRIDLNLLIILQVLLEERNGSRAARRLHLSQSAVSKALGRLRETFDDPLFVRSAYG 62 Query: 64 IAPTT 68 + PT Sbjct: 63 LEPTA 67 >UniRef50_Q471I4 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Ralstonia eutropha JMP134 RepID=Q471I4_RALEJ Length = 323 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 68/288 (23%), Positives = 122/288 (42%), Gaps = 28/288 (9%) Query: 9 KFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTT 68 + LN L++ + + S++KAA L +T A+S++L RLR F DPLF+R G + PT Sbjct: 11 ELSLNQLLVLDVLLSERSLTKAARVLNLTQPALSKTLARLRQYFGDPLFVRVGLRMEPTP 70 Query: 69 TGLNLHHHLEKNLRGLEQTINIVNKSELKKNFIIYGPQ---------LISCSNNSMLIRC 119 L L +RG+ Q++ L+ + + + P+ L+ + ML Sbjct: 71 KALE----LADPVRGILQSVR-----ALRSDHVGFDPRTSQRSFSFFLLDAGASQMLPPL 121 Query: 120 LRQDSSVEIECHDILMSAENAEE-----LLVHRKADLVITQMPVISRSVICMPLHTIRNT 174 L S + E IL+ A NA+ L + DL I P +++S+ L Sbjct: 122 L---SRLAEEAPGILVQAVNADATHLDIWLENGLVDLAIGSFPGLTQSIRRQLLWHETYG 178 Query: 175 LICSNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQME--IDERFMNRKISFRGSSLL 232 + HPR+ + +AE+ + + G + +E I+ + I R S Sbjct: 179 AVVRKDHPRLAQLGDLDAFVAEKHVLVSAVGTGHQHLSIERAIEAAVPHTNIICRVPSFA 238 Query: 233 TIINSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYN 280 T +D + ++P L + L+L + LP + + ++ Sbjct: 239 TAGLIAKHSDAVAVLPLTLARALCKDLDLTVVMPPLTLPGMDIAQHWH 286 >UniRef50_A8T595 Transcriptional regulator, LysR family, putative n=3 Tax=Vibrio RepID=A8T595_9VIBR Length = 301 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 33/76 (43%), Positives = 45/76 (59%) Query: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 + N +D D LL +F +Y++ S++KAAESL +T S VS L +LR D LF+ S Sbjct: 6 LMNNFDYTSLDGRLLRMFISVYENQSVTKAAESLKVTQSTVSHGLNQLRKIVKDELFVAS 65 Query: 61 GKGIAPTTTGLNLHHH 76 G+ IAPT L HH Sbjct: 66 GRSIAPTPKATELIHH 81 >UniRef50_Q11CG0 Transcriptional regulator, LysR family n=1 Tax=Chelativorans sp. BNC1 RepID=Q11CG0_MESSB Length = 304 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 66/263 (25%), Positives = 113/263 (42%), Gaps = 21/263 (7%) Query: 6 DLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIA 65 D K DL L F + + ++S+AA L + +S+ L +LRA F+DPL + SG + Sbjct: 2 DRWKIDLFTLRGFSILMEERNVSRAAFKLGLKQPTMSRMLAKLRAYFDDPLLVWSGGHMV 61 Query: 66 PTTTGLNLHHHLEKNLRGLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDS- 124 PT + L + + L +E+ + + + K + + + N L R + + + Sbjct: 62 PTPRAILLESEIHQVLATMERLSSSPQEFDPKTSGLTIRLAATGYTENVFLARVMSEVAV 121 Query: 125 -----SVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSN 179 +EI D L E+ V +T PV+ V+ + L+C Sbjct: 122 RAPGVQLEIRPPDRLHDTSALEKGEVDFLVGWNVTPAPVLRSRVL------FTDELVCIA 175 Query: 180 R--HPRITD-NSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRK----ISFRGSSLL 232 R HP + D N +YE+ +A Q + S ++ + ER R + FR +LL Sbjct: 176 RAGHPALEDGNLSYERYVALPHVQFDTPSKTTTELLLH--ERLAQRGDRPFVQFRVQNLL 233 Query: 233 TIINSIAVTDLLGIVPYELYNSY 255 T+ +A +DL+ V SY Sbjct: 234 TVAEIVANSDLIATVSKRFVISY 256 >UniRef50_D2TGJ2 Putative LysR-family transcriptional regulator n=1 Tax=Citrobacter rodentium ICC168 RepID=D2TGJ2_CITRO Length = 310 Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 53/260 (20%), Positives = 115/260 (44%), Gaps = 13/260 (5%) Query: 8 KKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPT 67 K+FD NL+ + + + +++KA++ L +TP+AVS +L RL+ +N+ LF+R G+ PT Sbjct: 3 KEFDYNLIKVLDAVISAGNVTKASKRLAVTPAAVSIALTRLQGFYNEALFVRGRSGLIPT 62 Query: 68 TTGLNLHHHLEKNLRGLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSVE 127 L +H + + ++ T+ +S + I G + S L + Sbjct: 63 MKALEIHERFCQAIDLIKLTLTPQKQSAERNKITILGGDITENYYLSQLYDDKLFERFTF 122 Query: 128 IECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRN-TLICSNRHPRITD 186 + E + LL+ + D+ I+ V C P+ ++ +IC + Sbjct: 123 RHFSNRNRDGEEMKRLLIMEECDIAISPTLVNDNDFECKPIDNFKHFCVICGKDNLLSEL 182 Query: 187 ---------NSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINS 237 ++ + A ++T + K + + + ER R + ++ SL +I+ Sbjct: 183 SQLSLHNFFSAHHAVFKANDYTAVTIKDNNLYNNNADYKER---RIVGYKSDSLTGLISI 239 Query: 238 IAVTDLLGIVPYELYNSYRD 257 + T L+ ++P ++ +++ Sbjct: 240 VERTQLVALMPLKVATFFKN 259 >UniRef50_B6AU51 Transcriptional regulator, LysR family, putative n=1 Tax=Rhodobacterales bacterium HTCC2083 RepID=B6AU51_9RHOB Length = 299 Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 44/155 (28%), Positives = 82/155 (52%), Gaps = 6/155 (3%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 L+ D L + +Y+ S + AAE+L + S+VS ++ RLR F+DPLF+R G I+P Sbjct: 5 LRGIDFGALETLQLVYRLRSFTAAAETLNVKQSSVSYTIDRLRKSFSDPLFVRQGNQISP 64 Query: 67 TTTGLNLHHHLEKNLRGLEQT--INIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDS 124 T ++L + E+ L +E+ +I + + L+ I L L+R LR ++ Sbjct: 65 TDKCISLVGYAERILAEIERASQPDIFDPASLRATVSISATYLSRAVLLPKLVRDLRNEA 124 Query: 125 -SVEIECHDILMSAENAEELLVHRKADLVITQMPV 158 ++ IE ++ +A + L+ KAD+ ++ + + Sbjct: 125 PNITIE---LITGFTDANQQLLSGKADMALSPVAI 156 >UniRef50_C8WFJ3 Transcriptional regulator, LysR family n=3 Tax=Zymomonas mobilis RepID=C8WFJ3_ZYMMN Length = 316 Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 30/78 (38%), Positives = 48/78 (61%) Query: 3 NLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGK 62 N+ D+ +FD NL++ F ++ S++KAA L ++ SAVS SL RLR D LFIR+ + Sbjct: 6 NISDITRFDFNLVITFLALWHERSVTKAAARLSLSQSAVSASLSRLRQAAGDLLFIRTRQ 65 Query: 63 GIAPTTTGLNLHHHLEKN 80 G+ PT +++ L + Sbjct: 66 GMEPTQRAIDMVESLSEG 83 >UniRef50_B8ERS8 Transcriptional regulator, LysR family n=1 Tax=Methylocella silvestris BL2 RepID=B8ERS8_METSB Length = 323 Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 30/83 (36%), Positives = 45/83 (54%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 ++ DLNLL +FE + +H S+ +A+ L +T SAVS +L RLR D LFI G+ P Sbjct: 4 IRTIDLNLLRVFEAVMRHRSVIRASRELGVTASAVSHALSRLRQALGDELFISGEAGMEP 63 Query: 67 TTTGLNLHHHLEKNLRGLEQTIN 89 T L L + L ++ + Sbjct: 64 TARALELEPAIRDGLERIDHAVG 86 >UniRef50_A6CUQ2 Putative transcription regulator protein n=1 Tax=Vibrio shilonii AK1 RepID=A6CUQ2_9VIBR Length = 298 Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 34/87 (39%), Positives = 51/87 (58%), Gaps = 7/87 (8%) Query: 8 KKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPT 67 K+ D NLL + IYQ+ S++ A L T SA+S+ L +LR Q DPLF+RS G+ PT Sbjct: 3 KEHDYNLLKVLVLIYQYRSLTTVAAVLGKTESAISKHLSKLREQLGDPLFVRSSNGLEPT 62 Query: 68 TTGLNLHHHLEKNLRGLEQTINIVNKS 94 H+LE+ + G+E + V ++ Sbjct: 63 -------HYLERIIPGIETGLRSVEQA 82 >UniRef50_C6C4P6 Transcriptional regulator, LysR family n=4 Tax=Proteobacteria RepID=C6C4P6_DICDC Length = 325 Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 44/157 (28%), Positives = 74/157 (47%), Gaps = 8/157 (5%) Query: 3 NLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGK 62 N +++ DLNL +FE +Y+ +AA L +T SA+S +L R+R + D LF R+G+ Sbjct: 2 NKINIETMDLNLFKVFEALYEEGGAGRAALRLGVTQSAISAALGRMRNIYGDRLFERTGR 61 Query: 63 GIAPTTTGLNLHHHLEKNLRGLEQTINIVN--KSELKKNFIIYGPQLISCSNNSMLIRCL 120 G+ PT LH + L Q++++ N E + + G S L R L Sbjct: 62 GLRPTRRADELHPIISDALNKCRQSLSMANSVGDEFQGRTVTMG---WSDDYEIALARTL 118 Query: 121 RQDSSVEIECHDILMSAEN---AEELLVHRKADLVIT 154 + E ++ + A ++L+ R DL I+ Sbjct: 119 TNQVAAEYPGIRLIFRQTHSRVAADMLMERAVDLAIS 155 >UniRef50_A8V9B9 LysR-like regulatory protein n=2 Tax=Betaproteobacteria RepID=A8V9B9_9BURK Length = 308 Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 60/260 (23%), Positives = 112/260 (43%), Gaps = 29/260 (11%) Query: 9 KFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTT 68 + D+ LL +F Y+ S+++AAE+L ++ +S +L +LR + DPLF+R+ +G+ T Sbjct: 3 EIDVKLLNVFAETYRTSSVTQAAENLGLSQPTISFNLSKLRDHYKDPLFVRTSRGMEATP 62 Query: 69 TGLNLHHHLEKNLRGLEQTINI---VNKSELKKNF---------IIYGPQLISCSNNSML 116 L+ + L + + SE ++ F I+ P L+ N + Sbjct: 63 FAQELYEQVVDLLASFSNIARLQTSFDPSEAQRIFRIAMTDISQIVLLPTLL----NKLR 118 Query: 117 IRCLRQD---SSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRN 173 I R S + E +L S E +L + MP + L R Sbjct: 119 IVAPRAQLRISHITTETPRMLESGE----------VELAVGFMPQLDAGFYQQKLFPQRF 168 Query: 174 TLICSNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLT 233 ++ ++RH + D+ + E ++ + G I + E+ ++R + + L Sbjct: 169 VVLAASRHVALGDSMSLEYYLSAGHVTVTPSGTGHSIIDRTLREQQLHRHVVLDVPNYLA 228 Query: 234 IINSIAVTDLLGIVPYELYN 253 I + +A TDLL VP +L + Sbjct: 229 IADIVAQTDLLATVPQKLAD 248 >UniRef50_B1K4K0 Transcriptional regulator, LysR family n=3 Tax=Burkholderia cenocepacia RepID=B1K4K0_BURCC Length = 301 Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 35/96 (36%), Positives = 56/96 (58%), Gaps = 5/96 (5%) Query: 11 DLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTTG 70 DLNLL F + S+ KAA+ L+++ SA+S++L R+R F DP+ IR+G+ + PT Sbjct: 10 DLNLLKAFSVLVAERSVVKAAKRLHLSESAMSRTLSRVRDAFGDPILIRAGRSLIPTPRA 69 Query: 71 LNLHHHLEKNLRGLEQTI----NIVNKSELKKNFII 102 L+LH + L + Q I +V+ + L + F I Sbjct: 70 LSLHPRVLDML-AMAQDILTRAELVDPASLTQTFTI 104 >UniRef50_Q15SK5 Transcriptional regulator, LysR family n=9 Tax=Gammaproteobacteria RepID=Q15SK5_PSEA6 Length = 306 Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 77/310 (24%), Positives = 134/310 (43%), Gaps = 42/310 (13%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 + + D+ L IF+ + + + SKAA L +T AVS+ L++LR F+D LF+R G P Sbjct: 4 IDRLDIKQLRIFQALIREKNASKAASQLGLTQQAVSEQLKKLRDVFDDRLFLRKTNGFIP 63 Query: 67 TTTGLNLHHHLEKNLRGLEQTIN--IVNKSELKKNFII----YGPQLISCSNNSMLIRCL 120 T +L ++K L G + ++ + N + ++I Y Q++ S LI L Sbjct: 64 TPLAEHLSVDIDKLLNGFQALLSPKVFNPKTISGEYVISATDYAQQVVLPS----LIAKL 119 Query: 121 RQDS-SVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSN 179 R +S +++I D + + +L++ K +L I I S + L + + S Sbjct: 120 RIESPNLKIIVRDFEI--DTLHDLMLSGKVNLAIAFPDYIPDSYPIINLFEEHHVCVAS- 176 Query: 180 RH-------PRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERF----MNRKISFRG 228 RH P + + ++Y I+A S + + ID+ F + R + Sbjct: 177 RHASIATQSPSLAEVASYPSIIA---------SPSRPNFKGSIDDWFKGFGLTRNVVVSA 227 Query: 229 SSLLTIINSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEH---PLPSIKLY-ISYNKSSL 284 + + TD + +P L+L EI+LEH P I + YN SL Sbjct: 228 PCFSIVPMYLNTTDSIAFLPSRAIKG----LDLVEIELEHCPEPFDVIAAWHPRYNDDSL 283 Query: 285 NNLVFSRFID 294 + S+ D Sbjct: 284 QKWIISKLTD 293 >UniRef50_A6W028 Transcriptional regulator, LysR family n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W028_MARMS Length = 309 Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 51/154 (33%), Positives = 73/154 (47%), Gaps = 12/154 (7%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 KK DLNLLV + + SI+K AE L ++PSA+S SL RLR F D L + G+ + Sbjct: 3 FKKLDLNLLVALDTLLTEQSITKGAEKLNMSPSALSNSLSRLRDYFEDDLLTQIGRRMVI 62 Query: 67 TTTGLNLHHHLEKNLRGLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCL------ 120 T G NL + L +E TI + E + I+ I CS+ + + Sbjct: 63 TPLGENLKVSVRNALNNIESTILVQPSFEPQTTDRIFS---IFCSDYTQTVLVPHALEIV 119 Query: 121 -RQDSSVEIECHDILMSAENAEELLVHRKADLVI 153 +Q S+ + + A N E L KADL+I Sbjct: 120 GKQKSTARFQL--LAQVANNPHEQLEQGKADLLI 151 >UniRef50_Q3S4D5 LysR-like regular protein n=1 Tax=Polaromonas naphthalenivorans CJ2 RepID=Q3S4D5_POLNA Length = 301 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 32/68 (47%), Positives = 46/68 (67%) Query: 6 DLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIA 65 DL++ DLNLLV+F + S+S +AE L +T AVS +L+RLRA D LF+R+ +G+ Sbjct: 2 DLREIDLNLLVVFNQLLLDRSVSTSAEKLGLTQPAVSNALKRLRAVLKDELFLRTSRGME 61 Query: 66 PTTTGLNL 73 PT L+L Sbjct: 62 PTPYALHL 69 >UniRef50_B7VU21 Transcriptional regulators, LysR family n=1 Tax=Vibrio splendidus LGP32 RepID=B7VU21_VIBSL Length = 309 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 65/264 (24%), Positives = 115/264 (43%), Gaps = 15/264 (5%) Query: 10 FDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTT 69 DLNLL F IYQ ++ KA+ L+++ A+S+SL RLR F+D LF++ +G++PT Sbjct: 9 LDLNLLRTFLVIYQEKNLQKASTRLHVSAPALSKSLNRLRHHFDDQLFLKVPRGLSPTPF 68 Query: 70 GLNLHHHLEKNLRGLEQTINIVNK---SELKKNFIIY-GPQLISCSNNSMLIRCLRQDSS 125 NL + L I + + S+L I P L+ + +Q + Sbjct: 69 SDNLAQKIAPTFDTLNNNIKSLQEFAPSDLNGKLTIAISPFLLHAIGKDLFTEIHQQAPN 128 Query: 126 VEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRIT 185 VE+ H + S + E++ + + +P+ + + C + + + HP I Sbjct: 129 VEL--HLVNWSKSSLEDISIGTSKLGINYDLPLSRKDIACQFITKDQFRVYVRKDHP-IQ 185 Query: 186 DNSTYEQIMAEEFTQLIS-----KSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAV 240 D + + LI+ K + + I E+D + I FR I+ +I+ Sbjct: 186 DRIEFSDVQNYPIATLIAADWNLKESFAEKIIREVDIT-LQPNIVFRSELPSAILETISE 244 Query: 241 TDLLGIVPYELYNSYRDFLNLKEI 264 T++L P Y + NLK + Sbjct: 245 TNIL--FPSTGYIHIERYPNLKAL 266 >UniRef50_A0KIB7 Transcriptional regulator, LysR family n=2 Tax=Aeromonas RepID=A0KIB7_AERHH Length = 303 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 33/84 (39%), Positives = 53/84 (63%) Query: 6 DLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIA 65 +L+ DLNLLV+ + + + + +KAAE L ++ AVS++L RLR ++DPL IR+ +G+ Sbjct: 2 NLRGVDLNLLVVLKALLEERNTTKAAERLAMSQPAVSRALARLRLLYDDPLLIRTPQGME 61 Query: 66 PTTTGLNLHHHLEKNLRGLEQTIN 89 PT L L + L +EQT + Sbjct: 62 PTARAEALLLPLREILHDIEQTFS 85 >UniRef50_Q87I72 Putative transcriptional regulator, LysR family n=7 Tax=Vibrio parahaemolyticus RepID=Q87I72_VIBPA Length = 332 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/86 (41%), Positives = 46/86 (53%) Query: 3 NLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGK 62 N L DLNLL IF + + AA+ L IT AVS+++ RLR FNDPLF+R+ Sbjct: 21 NKKPLHNLDLNLLKIFRVVSEEKKTVAAAKRLNITQPAVSRAMARLREHFNDPLFVRTRY 80 Query: 63 GIAPTTTGLNLHHHLEKNLRGLEQTI 88 G+ PT G L L K + L I Sbjct: 81 GLKPTDKGQLLSDSLPKIMDDLSNLI 106 >UniRef50_C6BS61 Transcriptional regulator, LysR family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BS61_DESAD Length = 310 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 67/279 (24%), Positives = 124/279 (44%), Gaps = 4/279 (1%) Query: 10 FDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTT 69 DLNLLVI + I+ S++ A L++T SAVS +L +LR F+D LF+R G + PT Sbjct: 9 LDLNLLVILDTIFTERSLTLAGNKLFMTQSAVSHALSKLRHHFDDRLFVRRGNIMEPTPL 68 Query: 70 GLNLHHHLEKNLRGLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCLR--QDSSVE 127 +H ++ +L+ + Q++ + + + + L +L LR ++ Sbjct: 69 CKTIHQNIAPSLKAINQSLADRGEFDPASSKRTFSLGLSDYLCKLLLPEILRLIDSRALG 128 Query: 128 IECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRITDN 187 I + + E EE+L K D+ + V+ L R + N HP + Sbjct: 129 ISIRIMQTTYEKREEMLQSGKLDVFLGCPRNYGAGVLKEKLFEDREVCVVRNDHPIKGEV 188 Query: 188 STYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLGIV 247 E++ EF L +G+ ++ + + + RKI I + + ++L+G + Sbjct: 189 MNEEEMAENEFAALSLSESGLGFLEDYLYRKGVQRKIKIVLQQETVIPSLVENSNLVGSI 248 Query: 248 PYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNN 286 L Y L+ + + PL + + +S + SLN+ Sbjct: 249 AQRLAEMYAAKGRLRIVHM--PLENTEFEVSQHWHSLND 285 >UniRef50_C6ARG9 Transcriptional regulator, LysR family n=7 Tax=Proteobacteria RepID=C6ARG9_RHILS Length = 310 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 57/245 (23%), Positives = 105/245 (42%), Gaps = 8/245 (3%) Query: 9 KFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTT 68 K+DLNLL +F + + ++++AAE L +T AVS +L RLR DPLFIR G+ PT Sbjct: 2 KYDLNLLPVFVALMEERNVTRAAEQLGMTQPAVSNALNRLRETLRDPLFIRERYGMKPTE 61 Query: 69 TGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSS 125 L + L L+ I + + + F I + +++ LR+ + Sbjct: 62 MAEALAPVIRGALASLDDVILGQQAFDPARATRQFTIAPNSYVEFVLMPVIVARLRE-CA 120 Query: 126 VEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNR--HPR 183 I + AE + ++V+ ++ +++ H + + L C R HP Sbjct: 121 PGIRLRLTPFGNDLAETGAMSGATEMVLGRIVEPPDNMVVQ--HLMDDGLACVVRKDHPE 178 Query: 184 ITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDL 243 I ++ + EQ ++ + + + + R +S + L + +AVTD Sbjct: 179 IAESISEEQYQRMRHVNVLPPGRMRVGLFQMLQQAGLRRDVSVSVTHFLAVPEMVAVTDY 238 Query: 244 LGIVP 248 +P Sbjct: 239 CATLP 243 >UniRef50_A1W256 Transcriptional regulator, LysR family n=2 Tax=Comamonadaceae RepID=A1W256_ACISJ Length = 323 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 39/156 (25%), Positives = 74/156 (47%), Gaps = 3/156 (1%) Query: 6 DLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIA 65 + + DLNLL +F+ + ++++AAE L IT AVS +L+RLR D L R G G+ Sbjct: 5 NFRTLDLNLLRVFDEVMAERNLTRAAEKLAITQPAVSNALRRLREVLGDELVTRRGHGVE 64 Query: 66 PTTTGLNLHHHLEKNLRGLEQTINI--VNKSELKKNFIIYGPQLISCSNNSMLIRCLRQD 123 PT L L + L L++T++ + + + F++ + LI + ++ Sbjct: 65 PTPRALALWPAVRHALAQLQETLSPGRFDPASAQTTFVLAMADATGATLIPPLIEIVERE 124 Query: 124 SSVEIECHDILMSAENAEELLVHRKADLVITQMPVI 159 + + + ++ + LL AD+ + P + Sbjct: 125 AP-GVSLRVVPLTTRDPRRLLDEESADMAVGYFPAV 159 >UniRef50_A9FJR3 Transcriptional regulator, LysR family n=2 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FJR3_SORC5 Length = 306 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 33/78 (42%), Positives = 46/78 (58%) Query: 4 LYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKG 63 L L+ DLNLL + + + ++++AAE L +T AVS +L RLR FND L +R GK Sbjct: 6 LPRLRAVDLNLLTVLDAVLTERNVTRAAERLGMTQPAVSSALNRLRLLFNDDLIVRRGKE 65 Query: 64 IAPTTTGLNLHHHLEKNL 81 +APT L L + K L Sbjct: 66 MAPTPRALALAGPIRKAL 83 >UniRef50_A1VMI6 Transcriptional regulator, LysR family n=28 Tax=Bacteria RepID=A1VMI6_POLNA Length = 333 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 62/267 (23%), Positives = 117/267 (43%), Gaps = 22/267 (8%) Query: 22 YQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPT--TTGL--NLHHHL 77 Y S+++AAE L + VS L RLR Q DPLF+R+ +G+ PT T L + L Sbjct: 53 YNTRSVTRAAEQLGQSQPTVSIWLARLRRQLGDPLFVRTPEGMLPTPRTDALIATVREVL 112 Query: 78 EKNLRGLEQTINIVNKSELKKNFIIYGPQLISCSNNSML------IRCLRQDSSVEIECH 131 E LR L ++ + + + ++ F I+ + S+ ++L +R L +E Sbjct: 113 E-GLRRLSESESRFDPATAQRGFRIF---MTDASHITLLPRLFSHVRALAPQVRLEAATI 168 Query: 132 DILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRITDNSTYE 191 D M+ L + DL + +P + L +C+ RHPRI + T + Sbjct: 169 DARMAPA-----LQSGEGDLALGLVPGLEAGFYQQTLFGQDWICLCNARHPRIGEMFTLQ 223 Query: 192 QIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLGIVPYEL 251 AE ++S + G + + + + R++ L + ++ +DL+ +P + Sbjct: 224 DYAAEAHIGIVSGT-GYQLLDGALKSQGIARRVLLELPGFLGLAAILSTSDLVATLPRHI 282 Query: 252 YNSYRDFLNLKEIKLEHPLP--SIKLY 276 + + L+ + +P ++K Y Sbjct: 283 GETLANAAGLRVLPCPFEIPGFTVKQY 309 >UniRef50_A8FYY5 Transcriptional regulator, LysR family n=2 Tax=Shewanella RepID=A8FYY5_SHESH Length = 331 Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 39/101 (38%), Positives = 58/101 (57%), Gaps = 5/101 (4%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 L + DLNLL +F +Y H ++S AAES+ ++ SA S +L RLR Q +D LFIRS + P Sbjct: 34 LHRLDLNLLKLFSALYVHRNVSVAAESMNLSQSAFSHALARLRVQLDDELFIRSRAQMIP 93 Query: 67 TTTGLNLHHHLEKNLRGL-----EQTINIVNKSELKKNFII 102 T ++H + + L L QT I ++S + NF + Sbjct: 94 TRYADSIHEPVAEVLSTLGSCFAPQTHFIPHESRHEFNFAV 134 >UniRef50_A2VZL6 Transcriptional regulator n=1 Tax=Burkholderia cenocepacia PC184 RepID=A2VZL6_9BURK Length = 185 Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 30/80 (37%), Positives = 47/80 (58%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 ++ DL L +F + H +I++AAE +I PSA+S+ + +L A PL RS +G+AP Sbjct: 1 MRDIDLKTLRLFVSVCDHRNIARAAEEAHIEPSAISKRIAQLEADLGAPLLARSRRGVAP 60 Query: 67 TTTGLNLHHHLEKNLRGLEQ 86 T+ G+ L H L LE+ Sbjct: 61 TSAGMALLEHARTVLFTLER 80 >UniRef50_UPI0001BCC5DA LysR family transcriptional regulator n=1 Tax=Aeromicrobium marinum DSM 15272 RepID=UPI0001BCC5DA Length = 315 Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 48/181 (26%), Positives = 82/181 (45%), Gaps = 9/181 (4%) Query: 18 FECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTTGLNLHHHL 77 F+ + S+++AAE + I A+S SL RLR F+DPL +R G+ +APT L L + Sbjct: 21 FDALMAESSVTRAAERMSIGQPAMSASLARLRKFFDDPLLVRQGRSLAPTNRALELVAPI 80 Query: 78 EKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSS-VEIECHDI 133 + L GLE TI + + + F + + L+ LR+++ V E + Sbjct: 81 REALDGLESTIRAGREFDPTTSSRTFTVMASDYVLLMFLGPLLSDLRREAPHVRFEIFPV 140 Query: 134 LMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLIC--SNRHPRITDNSTYE 191 +A +V + DL+I ++ + + L+C + HP + D T Sbjct: 141 ---TRDAAPSVVRSQLDLLIYPDELVEDEPLVRSRMLFTDRLVCAVARDHPDVGDVMTEH 197 Query: 192 Q 192 Q Sbjct: 198 Q 198 >UniRef50_Q1GMN1 Transcriptional regulator, LysR family n=1 Tax=Ruegeria sp. TM1040 RepID=Q1GMN1_SILST Length = 319 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 68/290 (23%), Positives = 127/290 (43%), Gaps = 19/290 (6%) Query: 6 DLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIA 65 +L DLNLL +F + S++KAA S+ ++ AVS +L+RLR +D LFIRS G+ Sbjct: 11 NLNAIDLNLLKVFSALAAERSVTKAANSVGLSQPAVSHALRRLRDLMDDELFIRSTDGMQ 70 Query: 66 PTTTGLNLHHHLEKNLRGLEQTINIVNKSE---LKKNFIIYGPQLISC-SNNSMLIRCLR 121 PT L ++ +L+ L+ + + + ++ L+ + + L S + R + Sbjct: 71 PTERCRELAPAIDASLKMLQDAMTVKDDNDPANLRATYRLGMNDLFSTLLVPGLTARVAK 130 Query: 122 QDSSVEIE-CHDILM--SAENAEELLVHRKADLVITQ---MPV-ISRSVICMPLHTIRNT 174 Q +V + H + + + ++A L + DL + Q P R ++ + Sbjct: 131 QAPNVSLRFLHSMAINQNVDDAYSDLERGRIDLTVIQDFDTPSRFDRELLGA------SE 184 Query: 175 LICSNR--HPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLL 232 +C R HP + EQ + + A I + + + R+I R Sbjct: 185 FVCVARAGHPVFQPGLSMEQYTSLGHIMFTTLDAEYSRIDEALSKMGIRRRIELRVPHYS 244 Query: 233 TIINSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKS 282 +++ A+TDL+ VP L L+ +L P K++ ++K+ Sbjct: 245 AALSATALTDLVYTVPRILAQHAEQAFGLQVSELPFEAPVRKIFQVWHKT 294 >UniRef50_B8IW67 Transcriptional regulator, LysR family n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IW67_METNO Length = 316 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 37/114 (32%), Positives = 59/114 (51%), Gaps = 2/114 (1%) Query: 10 FDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTT 69 D L F I + S+SKA+ +LY+ A+SQ L +L + PL RS +G+ PT Sbjct: 1 MDFRQLRYFAQIVESGSLSKASRNLYVAQPALSQQLAKLEDEVGKPLLHRSTRGVTPTEN 60 Query: 70 GLNLHHHLEKNLRGLEQTINIVNK--SELKKNFIIYGPQLISCSNNSMLIRCLR 121 GL L+HH LR L+Q ++I + +++ I P + + L+R +R Sbjct: 61 GLALYHHARFMLRQLDQALSIARQESGQIEGMVSIGLPATTVLAIGTPLVRRIR 114 >UniRef50_B2JTT0 Transcriptional regulator, LysR family n=3 Tax=Burkholderiaceae RepID=B2JTT0_BURP8 Length = 324 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 27/96 (28%), Positives = 55/96 (57%), Gaps = 2/96 (2%) Query: 9 KFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTT 68 + DLNLL +F+ I++ ++ A + L+++ SA+S +L R+R D LF+R+GKG+ PT Sbjct: 5 RIDLNLLRVFDAIFEDRNLGLAGKRLHLSQSAISHALARMREVLGDDLFVRTGKGMEPTM 64 Query: 69 TGLNLHHHLEKNLRGLEQTINI--VNKSELKKNFII 102 L + + L+ + + + + ++ F++ Sbjct: 65 RALRMAAQVRGALQQIRAALGVDEFDPRVAQRKFVV 100 >UniRef50_Q12H69 Transcriptional regulator, LysR family n=14 Tax=Burkholderiales RepID=Q12H69_POLSJ Length = 342 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 41/159 (25%), Positives = 77/159 (48%), Gaps = 3/159 (1%) Query: 3 NLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGK 62 N + + DLNLL +F+ + S+++AA +L +T AVS +L+RLR D L RSG+ Sbjct: 26 NPTNFRTLDLNLLRVFDEVMAERSLTRAARNLSLTQPAVSNALRRLRETLGDELVQRSGQ 85 Query: 63 GIAPTTTGLNLHHHLEKNLRGLEQTI--NIVNKSELKKNFIIYGPQLISCSNNSMLIRCL 120 G+APT + + + L+ L++++ + + F++ + LI L Sbjct: 86 GMAPTPRARAIWPAVREALQRLQESLIPDEFVPGQATTTFVLAMADATAAELIPGLIETL 145 Query: 121 RQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVI 159 Q++ + I ++ + LL + DL + P + Sbjct: 146 EQEAP-GVSMRVIPLTTRDPRRLLDEQACDLAVGYFPSV 183 >UniRef50_A6CYC8 Probable transcription regulator protein n=1 Tax=Vibrio shilonii AK1 RepID=A6CYC8_9VIBR Length = 294 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 79/298 (26%), Positives = 131/298 (43%), Gaps = 44/298 (14%) Query: 13 NLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTTGLN 72 LL + + + S++ AAE L +T SA+S++L +LRA+F+DPL IR GK T G + Sbjct: 7 KLLRPLQALLETRSLTDAAERLRVTQSAMSRNLTQLRAEFSDPLLIREGKTFVLTARGES 66 Query: 73 LHHHLEKNLRGLEQ--TINIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSVEIEC 130 L L L +E + + + SE+K+ + I S S L +D S+ Sbjct: 67 LKRALPHVLSAIEGLYSDSSIEPSEIKRTYRIAYSSFSSLS--------LVKDLSLA--- 115 Query: 131 HDILMSAENAE---ELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRITDN 187 ++ A NA EL HR D + T+ ++ P H I + + RI DN Sbjct: 116 --LMSQAPNASFSMELWQHRDIDELSTE----DVDILITPAHRIPDNIYGK----RIADN 165 Query: 188 STYEQIMAEEFTQ----------LISKSA---GVDDIQMEIDERFMN----RKISFRGSS 230 Y + ++E + L S+ V +I +E++E F N R ++ SS Sbjct: 166 D-YVVVRSKEHHKSQQTLCLERYLESRHVLLHLVANIDLEVNEFFANLSVKRNVALTLSS 224 Query: 231 LLTIINSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLV 288 ++ + +DLL +P L D + L LPS Y+ ++ N++ Sbjct: 225 AREALDVVRESDLLVTLPKYLVERLPDKSDFDIHPLPFSLPSHSYYLLWHAKWQNDVA 282 >UniRef50_A6EZR5 Transcriptional regulator, LysR family protein n=1 Tax=Marinobacter algicola DG893 RepID=A6EZR5_9ALTE Length = 306 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 30/72 (41%), Positives = 43/72 (59%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 L + DL L +C+ + ++S+ A+ L +T AVS L++LRA FND LFIRSG G+ P Sbjct: 4 LNRVDLKQLRTLQCLLREGNLSRVADQLGVTQQAVSDQLKKLRATFNDRLFIRSGNGVTP 63 Query: 67 TTTGLNLHHHLE 78 T L L+ Sbjct: 64 TAYARTLGPKLD 75 >UniRef50_C5CV67 Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus S110 RepID=C5CV67_VARPS Length = 300 Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 69/277 (24%), Positives = 113/277 (40%), Gaps = 13/277 (4%) Query: 6 DLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIA 65 +L + DLNLL + + + +S+AA+ L++ AVS +L RLR DPL +R G+ + Sbjct: 5 ELSRIDLNLLTVLAALMRERHVSRAAQRLHLGQPAVSHALARLRELTGDPLLVRQGRVME 64 Query: 66 PTTTGLNLHHHLEKNLRGLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSS 125 PT L L L L +E T E + ++ L +ML R LR S Sbjct: 65 PTERALALMQGLGPALEQIEATFRAQADFEPARAAPVFRIGLTDDLQIAMLPRLLRALSV 124 Query: 126 VEIECHDILMSA--ENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLI-CSNRHP 182 + ++ NA L + V+T + + + T R L+ Sbjct: 125 EAPRARLVTLTVCYRNAARYLDEGQVSAVMTFLKDLPAGAKIRKVRTARFALLRADTAAA 184 Query: 183 RIT--DNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAV 240 R+T D ++ L VD+ ++E R+++F ++ +A Sbjct: 185 RLTLDDYCRRRHVLVTYAGDLCGT---VDET---LNELGRQREVAFSVPQFGSLPAVLAG 238 Query: 241 TDLLGIVP--YELYNSYRDFLNLKEIKLEHPLPSIKL 275 T+LL VP L S + L + + E P IKL Sbjct: 239 TELLATVPEHVALALSAQGGLRCEALPFESPSYQIKL 275 >UniRef50_B5ZKB2 Transcriptional regulator, LysR family n=2 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=B5ZKB2_GLUDA Length = 317 Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 62/283 (21%), Positives = 126/283 (44%), Gaps = 20/283 (7%) Query: 10 FDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTT 69 +DLNLL + + S++ AAE L ++ + +S++L RLR F+D + ++SG+ + PT Sbjct: 8 YDLNLLQAMNVLVEESSVTGAAERLQVSAATMSRTLSRLRETFHDAILVQSGRHMVPTPR 67 Query: 70 GLNLHHHLEKNLRG---LEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSV 126 L + + + L L + + ++ + L F I ++ S L+R LR D Sbjct: 68 ALQMQPRVSQILSAISDLYRPRHALDFTGLTPTFRIRAADVVIGSYAEALLRALRAD--- 124 Query: 127 EIECHD--ILMSAE---NAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 C D ++ +AE + + L DL I ++ ++ L R + H Sbjct: 125 ---CPDTTLIFTAESNSDDSDFLRQGGIDLYIGATALLRPEIMRQTLFESRFRGVVRAGH 181 Query: 182 PRITDNSTYEQIMAEEFTQLISKS---AGVDDIQMEIDERFMNRKISFRGSSLLTIINSI 238 P + T + ++A E + + +D++ D+ + R ++ +S + + Sbjct: 182 PILLGKITPQALVAYEHIAVSRRGRRRGPIDEVLA--DQYGLERTVALLLTSFYAALQGL 239 Query: 239 AVTDLLGIVPYELYNSYR-DFLNLKEIKLEHPLPSIKLYISYN 280 + TDL+ P L ++ D L L L L + ++ +++ Sbjct: 240 SQTDLILPAPDILTDAAMLDRLGLYGFPLPLDLEPVTIFQAWH 282 >UniRef50_Q38ZY8 Transcriptional regulator, LysR family n=1 Tax=Burkholderia sp. 383 RepID=Q38ZY8_BURS3 Length = 310 Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 35/101 (34%), Positives = 58/101 (57%), Gaps = 3/101 (2%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 +DL+ FD+NLL+ F+ + Q S+++AA L I A+S SL LR D LFIR G+ + Sbjct: 7 FDLRSFDMNLLIAFDALMQERSVTRAAAKLRIQQPAMSHSLSTLRLLLRDELFIRVGRTL 66 Query: 65 APTTTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFII 102 PT L+L H + +L L++ + + S +++F + Sbjct: 67 QPTPRALSLQHTVRSSLLQLQEALKTEESFDPSNARRDFRV 107 >UniRef50_Q15XK7 Transcriptional regulator, LysR family n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15XK7_PSEA6 Length = 302 Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 70/304 (23%), Positives = 141/304 (46%), Gaps = 33/304 (10%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 ++ DLNLLV + + + +I+++AE L+++ SA S L RLRA F D L ++ GK + P Sbjct: 3 FEQLDLNLLVALDILIEEQNITRSAERLHLSQSATSGILSRLRAFFEDDLLVQIGKKMQP 62 Query: 67 TTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNF-IIYGPQLISCSNNSMLIRCLRQ 122 T L L + L + +I N +++F II +I + ++ + Sbjct: 63 TPFALELQGPVAGVLATVRGSIIGKKANNPEHSERHFKIIASDYVIQVLLSHVVAEVAKL 122 Query: 123 DSSVEIE-----CHDILMSAENAEELLVHRKADLV--ITQMPVISRSVICMPLHTIRNTL 175 V E H++ + ++ +++V +A ++ + +IS ++C+ I NT Sbjct: 123 APKVTFEFLTPFAHEMNILSKGGADMMVAPEAIILSNYSSASLISDELVCIA--DINNT- 179 Query: 176 ICSNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFM------NRKISFRGS 229 + D T+EQ F + S G + + E+++ NRKI+ S Sbjct: 180 -------EVGDELTFEQ-----FNAMGHVSVGFARVSLLSIEQWLINTLETNRKIAVITS 227 Query: 230 SLLTIINSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVF 289 T++ ++ T+ + I+P + + +K +KL P++K + ++ +L+N Sbjct: 228 DFSTMVYALLNTNRIAILPRHFVDMHIQREAVKTVKLPFSPPNLKESLMWH-PTLDNDPM 286 Query: 290 SRFI 293 R++ Sbjct: 287 HRWL 290 >UniRef50_A5V8P8 Transcriptional regulator, LysR family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V8P8_SPHWW Length = 316 Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 28/56 (50%), Positives = 39/56 (69%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGK 62 L +FDLNLLV+ + + S+++AAE L++T AVS SL RLR F DPL +R G+ Sbjct: 5 LTQFDLNLLVVLDALLTEKSVTRAAERLFVTQPAVSGSLARLRDIFEDPLLVRVGR 60 >UniRef50_Q46T42 Regulatory protein, LysR:LysR, substrate-binding n=2 Tax=Burkholderiaceae RepID=Q46T42_RALEJ Length = 330 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 26/58 (44%), Positives = 41/58 (70%) Query: 10 FDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPT 67 FD NLL +F+ + + S+++AA L +T SA+S +L RLR F+DPLF+++ G+ PT Sbjct: 6 FDYNLLTVFDAMLRERSVTRAAAQLGLTQSAMSHALNRLREFFDDPLFVKTAAGMTPT 63 >UniRef50_Q1YUH5 Nodulation protein d1 n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YUH5_9GAMM Length = 306 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 72/286 (25%), Positives = 124/286 (43%), Gaps = 24/286 (8%) Query: 26 SISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTTGLNLHHHLEKNLRGLE 85 S+S++AE L+++ A+S +L+RLR FNDP+ + GK + T L +H L+ L +E Sbjct: 22 SVSRSAERLHLSQPAMSAALRRLREYFNDPILKQHGKRMVSTPHALIIHQELKVVLASVE 81 Query: 86 QTIN---IVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQ-DSSVEIECHDILMSAENAE 141 I+ + + + F I ++ LIR LR ++++E I+ A++ Sbjct: 82 ALISKTAFFDPATTSRKFTITASDYLAQVIFVPLIRHLRNVAPNIQLE---IVPPADSTH 138 Query: 142 ELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRITDNSTYEQIMAEE---- 197 ELL DLVI +IS L R ++ +P ++Q M EE Sbjct: 139 ELLSQGSIDLVILPEQMISDEFPSELLFEDRFVIVGCQSNP------AFQQAMTEEAFYT 192 Query: 198 ----FTQLISKSA-GVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLGIVPYELY 252 +L S+ V D Q+E R +R S L + TD L ++ L Sbjct: 193 SGHVVVKLGSRRPISVSDQQLE--SRKKSRDTDILVGSFLLAPEMVVGTDRLTVMHERLA 250 Query: 253 NSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 N + + + L PSIK ++ + + N+ + ++ E Sbjct: 251 NIFATRVPIVTAPLPFSFPSIKEHVQVHSARSNDPGIQYILQKIKE 296 >UniRef50_Q16B23 Transcriptional regulator, LysR family, putative n=2 Tax=Roseobacter RepID=Q16B23_ROSDO Length = 304 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 29/69 (42%), Positives = 44/69 (63%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 +D+ D LL +F ++Q S++KAA +L + S +S SL++LR DPLF++SG+GI Sbjct: 4 FDVLSIDGKLLKVFLTVFQEKSVTKAACALGTSQSTISHSLEKLRHCVGDPLFVKSGRGI 63 Query: 65 APTTTGLNL 73 APT L Sbjct: 64 APTNVAAAL 72 >UniRef50_UPI000190F23D putative DNA-binding transcriptional regulator n=5 Tax=Salmonella enterica subsp. enterica serovar Typhi RepID=UPI000190F23D Length = 186 Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 44/168 (26%), Positives = 86/168 (51%), Gaps = 3/168 (1%) Query: 135 MSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRITDNSTYEQIM 194 + ++AE L + DL+I +RS+ L + ++C HP + + T E++ Sbjct: 20 IPVDDAESQLSQFQTDLIINTHSYNNRSIQHHVLFSDTLEIVCRQHHPCLANAITEERLN 79 Query: 195 AEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLGIVPYELYNS 254 + + T L+ + + ++ + E F +++ISF ++ TI + IA +DLLG++P Y+ Sbjct: 80 SADHTFLMLEGQHLSLLRQRLQETFPDQQISFSSYNIFTIASLIASSDLLGLMPTRFYDL 139 Query: 255 YRDFLNLKEIKLEHPLPS--IKLYISYNKSSLNNLVFSRFIDRLNESF 300 + L+ + P+ S ++ + YNK SL + V ID + E+F Sbjct: 140 FSRCWPLERLPYA-PVNSEQVEFSLHYNKLSLRDPVLENVIDIIREAF 186 >UniRef50_Q5E7C7 Transcriptional regulator, LysR family n=5 Tax=Vibrionaceae RepID=Q5E7C7_VIBF1 Length = 330 Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 70/274 (25%), Positives = 112/274 (40%), Gaps = 9/274 (3%) Query: 3 NLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGK 62 N + K DLNLLV F + + S+S AA L++ SA+S SL RLR +DPLF R G Sbjct: 22 NEINWKAVDLNLLVAFSTLMETKSVSLAANKLFVGQSAMSHSLSRLRELLHDPLFERQGH 81 Query: 63 GIAPTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRC 119 + PT + L+ + K L+ + I + SE F I + + Sbjct: 82 QMIPTAKAIQLYPLVNKVLQTISGDILKVDTFEASEFTGTFKIGMTDYAELLFAADIFDA 141 Query: 120 LRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSN 179 + Q + C + A N ++ DLVI M + L+T ++ + Sbjct: 142 IHQLAPNAQLCFTTVDKA-NYQDRFDSEPLDLVIGSMKPELKEFQYQTLYTEKHVCMWDG 200 Query: 180 RHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIA 239 + + T + ++ + A + E+ + R +S LTI + + Sbjct: 201 QRHLFSSPITLDDYISLPHALVSPDGALKTGVDKELKALGVGRSVSVASKHFLTIRHLMK 260 Query: 240 VTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSI 273 DL+ +VP EL L+L KL H P I Sbjct: 261 KRDLICVVP-ELMAQ----LDLFSEKLVHSEPPI 289 >UniRef50_B5XYZ1 Transcriptional regulator, LysR family n=5 Tax=Klebsiella RepID=B5XYZ1_KLEP3 Length = 308 Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 63/283 (22%), Positives = 120/283 (42%), Gaps = 16/283 (5%) Query: 8 KKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPT 67 ++ D L F +Y+ ++S AA++L I+ S L++LR F DPLF+R G+ + PT Sbjct: 3 EELDFKSLRFFSALYRLGNVSPAADALNISQPTGSLLLKKLRDHFADPLFVRVGQRMMPT 62 Query: 68 TTGLNLHHHLEKNLRGLEQTINIVNK---SELKKNFIIYGPQLISCSNNSMLIRCLRQDS 124 + + L+ + + + + + ++NF I + + +L L+Q + Sbjct: 63 PRADAIAPTVFTLLQLADNDLAVKPEFLPQQSQRNFTIGMTDISQMTLLPLLQIALQQQA 122 Query: 125 SVEIECHDILMSAENAEE----LLVHRKADLVITQMPVISRSVICMPLHTIRNTLIC--S 178 + I + +N +E L K DL I + + SV H + +C + Sbjct: 123 A-----DGITFTIQNLDEQTLNALESGKCDLAIGYLTQLPDSVYQQ--HLFDQSYVCLAA 175 Query: 179 NRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSI 238 HPRI E E+ + + D+ +DE M R+I+ S L + Sbjct: 176 ENHPRIRTQLRAEDWRQEKHLAIRVEGTAHGDMDKRLDEHSMPRRIALTLPSFLGTGELV 235 Query: 239 AVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNK 281 A +D++ +VP ++ + L PL I + +++ Sbjct: 236 AESDMIAVVPEQVARHITRRYPCRSWPLPFPLARIAIRQVWHQ 278 >UniRef50_Q4KKE5 Transcriptional regulator, LysR family n=27 Tax=Proteobacteria RepID=Q4KKE5_PSEF5 Length = 308 Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 62/275 (22%), Positives = 119/275 (43%), Gaps = 8/275 (2%) Query: 11 DLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTTG 70 D+NLLV + + S+ AA + ++P+A+S++L R+R DP+ +R+G+G+ PT Sbjct: 5 DMNLLVALDALLDEGSVVGAARRMNLSPAAMSRTLTRIRDALGDPVLVRAGRGLVPTPKA 64 Query: 71 LNLHHHLEKNLRGLE---QTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCL-RQDSSV 126 L L + + ++ + V+ L++ F + LI L RQ Sbjct: 65 LELRSQVRDVVEQAALVFRSADKVDLGSLQRRFNVRANDFFVGVYGGRLIDTLERQAPLC 124 Query: 127 EIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRITD 186 E+ + + +E L + DL I+ ++ V L T + HP + + Sbjct: 125 ELR---FVPEGDGDDEALREGRIDLRISNTRPLTPEVKVQNLFTTAFVGLVREGHPLLDE 181 Query: 187 NSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLGI 246 + T E+ A + + I + E+ + R++ S + + +DL+ Sbjct: 182 DITAERFAAFPHISMSRRGIARGPIDAALAEQGLERRVPLIAPSFHAAMFMLPDSDLILP 241 Query: 247 VPYE-LYNSYRDFLNLKEIKLEHPLPSIKLYISYN 280 VP E L + R L L+ L LP++ L +++ Sbjct: 242 VPQETLLSVSRLGLRLRSFVLPISLPTLVLTQAWH 276 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P77746 Uncharacterized HTH-type transcriptional regulat... 387 e-106 UniRef50_UPI0001826721 hypothetical protein EcanA3_12211 n=1 Tax... 289 6e-77 UniRef50_C9XYN5 Uncharacterized HTH-type transcriptional regulat... 284 2e-75 UniRef50_B9Z480 Transcriptional regulator, LysR family n=1 Tax=L... 271 2e-71 UniRef50_Q2S713 Transcriptional regulator n=1 Tax=Hahella chejue... 270 3e-71 UniRef50_B1KAV0 Transcriptional regulator, LysR family n=5 Tax=B... 267 3e-70 UniRef50_Q5LKP3 Transcriptional regulator, LysR family n=1 Tax=R... 265 2e-69 UniRef50_D2YJX0 Transcriptional regulator, LysR family n=1 Tax=V... 264 2e-69 UniRef50_A5F3E5 Transcriptional regulator, LysR family n=29 Tax=... 264 3e-69 UniRef50_Q473Q1 Transcriptional regulator, LysR family n=9 Tax=B... 263 4e-69 UniRef50_A0LD88 Transcriptional regulator, LysR family n=1 Tax=M... 261 2e-68 UniRef50_A6EYC4 LysR family regulatory protein n=1 Tax=Marinobac... 261 3e-68 UniRef50_B5XZT9 Transcriptional regulator, LysR family n=5 Tax=K... 261 3e-68 UniRef50_Q2S7V2 Transcriptional regulator n=1 Tax=Hahella chejue... 260 5e-68 UniRef50_B4X4B4 LysR substrate binding domain protein n=1 Tax=Al... 259 1e-67 UniRef50_Q2IYM8 Transcriptional regulator, LysR family n=2 Tax=R... 258 2e-67 UniRef50_A9G5G2 Nodulation protein D n=2 Tax=Proteobacteria RepI... 258 2e-67 UniRef50_C6XIT5 Transcriptional regulator, LysR family n=1 Tax=H... 257 3e-67 UniRef50_Q5P743 Transcriptional regulator, LysR family n=2 Tax=B... 257 5e-67 UniRef50_A6T413 Transcriptional regulator, LysR family n=1 Tax=J... 256 5e-67 UniRef50_Q1XGL2 Transcriptional activator NahR n=3 Tax=root RepI... 256 5e-67 UniRef50_P10183 HTH-type transcriptional activator nahR n=67 Tax... 256 7e-67 UniRef50_A1U2R6 Transcriptional regulator, LysR family n=3 Tax=M... 256 7e-67 UniRef50_B0C5B7 Transcriptional regulator, LysR-family n=1 Tax=A... 255 2e-66 UniRef50_C3KKF8 Putative transcriptional regulatory protein, Lys... 255 2e-66 UniRef50_Q7MC61 Transcriptional regulator n=9 Tax=Gammaproteobac... 254 2e-66 UniRef50_A8GKS5 Transcriptional regulator, LysR family n=1 Tax=S... 254 4e-66 UniRef50_B8KV86 Putative transcriptional regulator, LysR family ... 253 5e-66 UniRef50_B7WQP0 Transcriptional regulator, LysR family n=1 Tax=C... 252 9e-66 UniRef50_Q13QG3 Transcriptional regulator, LysR family n=9 Tax=P... 252 1e-65 UniRef50_Q3KA14 LysR family regulatory protein n=24 Tax=Bacteria... 251 2e-65 UniRef50_A1WRT3 Transcriptional regulator, LysR family n=1 Tax=V... 250 3e-65 UniRef50_Q15UP0 Transcriptional regulator, LysR family n=4 Tax=A... 250 5e-65 UniRef50_Q12M05 Transcriptional regulator n=3 Tax=Gammaproteobac... 250 5e-65 UniRef50_C6ARG9 Transcriptional regulator, LysR family n=7 Tax=P... 250 5e-65 UniRef50_Q1MWN1 LysR-type regulatory protein n=1 Tax=Sphingomona... 249 7e-65 UniRef50_A1W256 Transcriptional regulator, LysR family n=2 Tax=C... 249 9e-65 UniRef50_Q13JD9 Transcriptional regulator, LysR family n=1 Tax=B... 248 2e-64 UniRef50_Q7W2A6 Transcriptional regulator n=3 Tax=Bordetella Rep... 247 4e-64 UniRef50_A9AQX4 Transcriptional regulator, LysR family n=20 Tax=... 246 6e-64 UniRef50_B7VQ63 Transcriptional regulators, LysR family n=3 Tax=... 246 7e-64 UniRef50_A0LD87 Transcriptional regulator, LysR family n=1 Tax=M... 245 1e-63 UniRef50_Q39AY8 Transcriptional regulator, LysR family n=1 Tax=B... 245 1e-63 UniRef50_Q1GMN1 Transcriptional regulator, LysR family n=1 Tax=R... 245 2e-63 UniRef50_Q1R0T8 Transcriptional regulator, LysR family n=9 Tax=G... 245 2e-63 UniRef50_A4YPA1 Putative transcriptional regulator, LysR family ... 244 3e-63 UniRef50_A8H3B3 Transcriptional regulator, LysR family n=7 Tax=G... 242 9e-63 UniRef50_Q0ARX0 Transcriptional regulator, LysR family n=1 Tax=M... 242 1e-62 UniRef50_Q12H69 Transcriptional regulator, LysR family n=14 Tax=... 242 2e-62 UniRef50_B5XYZ1 Transcriptional regulator, LysR family n=5 Tax=K... 241 2e-62 UniRef50_A6VUW1 Transcriptional regulator, LysR family n=2 Tax=M... 241 2e-62 UniRef50_Q0VLU8 Transcriptional regulator, LysR family n=2 Tax=A... 241 3e-62 UniRef50_Q8YZV2 Transcriptional regulator n=2 Tax=Nostocaceae Re... 240 3e-62 UniRef50_B2JSH4 Transcriptional regulator, LysR family n=2 Tax=B... 240 4e-62 UniRef50_A6EW06 Transcriptional regulator n=2 Tax=Marinobacter R... 240 4e-62 UniRef50_A8V9B9 LysR-like regulatory protein n=2 Tax=Betaproteob... 240 4e-62 UniRef50_A9GLW1 Transcriptional regulator, LysR family n=1 Tax=S... 240 5e-62 UniRef50_B7RYN1 Transcriptional regulator, LysR family protein n... 240 5e-62 UniRef50_A9R140 Substrate-binding transcriptional regulator, Lys... 239 8e-62 UniRef50_Q7MEK1 Transcriptional regulator n=15 Tax=Vibrionaceae ... 239 1e-61 UniRef50_B0TPA4 Transcriptional regulator, LysR family n=2 Tax=S... 239 1e-61 UniRef50_Q1N663 Regulatory protein, LysR:LysR, substrate-binding... 238 2e-61 UniRef50_A8H6N4 Transcriptional regulator, LysR family n=3 Tax=S... 238 2e-61 UniRef50_Q0SCY7 Transcriptional regulator, LysR family protein n... 238 2e-61 UniRef50_B5JUQ0 Transcriptional regulator, LysR family, putative... 238 2e-61 UniRef50_Q081Z6 Transcriptional regulator, LysR family n=1 Tax=S... 237 3e-61 UniRef50_B7VH72 Transcriptional regulator n=4 Tax=Vibrionales Re... 237 5e-61 UniRef50_A9CLK9 Transcriptional regulator, LysR family n=2 Tax=A... 236 5e-61 UniRef50_A8GG55 Transcriptional regulator, LysR family n=1 Tax=S... 236 6e-61 UniRef50_A6CXP0 Transcriptional regulator, LysR family protein n... 236 6e-61 UniRef50_Q13YH7 Transcriptional regulator, LysR family n=12 Tax=... 236 6e-61 UniRef50_P30979 Uncharacterized HTH-type transcriptional regulat... 235 1e-60 UniRef50_A5W6Q9 Transcriptional regulator, LysR family n=12 Tax=... 235 1e-60 UniRef50_A3YHF6 Transcriptional regulatory protein n=2 Tax=Gamma... 235 2e-60 UniRef50_A9FW21 Transcriptional regulator, LysR family n=2 Tax=M... 234 2e-60 UniRef50_A3Y808 Transcriptional regulator, LysR family protien n... 234 3e-60 UniRef50_B0C7Y6 Transcriptional regulator, LysR family n=1 Tax=A... 234 4e-60 UniRef50_D1TCI7 LysR family transcriptional regulator n=2 Tax=Bu... 233 5e-60 UniRef50_C4UEX0 Lys-R type regulatory protein n=1 Tax=Yersinia r... 233 6e-60 UniRef50_D0RY94 Transcriptional regulator n=4 Tax=Acinetobacter ... 233 7e-60 UniRef50_B0BQD1 HTH-type transcriptional activator n=15 Tax=Prot... 233 7e-60 UniRef50_Q7MCM8 Transcriptional regulator n=8 Tax=Vibrionaceae R... 232 9e-60 UniRef50_A1VMI6 Transcriptional regulator, LysR family n=28 Tax=... 232 1e-59 UniRef50_B7V4S2 Probable transcriptional regulator n=7 Tax=Pseud... 232 1e-59 UniRef50_B6R1K2 Transcriptional regulator, LysR family n=1 Tax=P... 232 1e-59 UniRef50_B4TAI7 LysR-family transcriptional regulator n=40 Tax=E... 232 1e-59 UniRef50_P52679 PCP degradation transcriptional activation prote... 231 3e-59 UniRef50_A5WDE8 Transcriptional regulator, LysR family n=1 Tax=P... 231 3e-59 UniRef50_A6X639 Transcriptional regulator, LysR family n=1 Tax=O... 230 3e-59 UniRef50_B9JQ31 Transcriptional regulator n=1 Tax=Agrobacterium ... 230 3e-59 UniRef50_A1U1I0 Transcriptional regulator, LysR family n=67 Tax=... 230 3e-59 UniRef50_C5CVL6 Transcriptional regulator, LysR family n=5 Tax=c... 230 4e-59 UniRef50_A4XX96 Transcriptional regulator, LysR family n=3 Tax=P... 230 4e-59 UniRef50_A6FDU8 Transcriptional regulator, LysR family protein n... 230 4e-59 UniRef50_Q1ZB78 Transcriptional regulator, LysR family protein n... 230 5e-59 UniRef50_C0ZNV8 Putative LysR family transcriptional regulator n... 230 5e-59 UniRef50_B7RV99 Transcriptional regulator, LysR family protein n... 230 5e-59 UniRef50_A6FYP7 Transcriptional regulator, LysR family protein n... 230 5e-59 UniRef50_C5BHM7 Transcriptional regulator, LysR family n=2 Tax=E... 230 6e-59 UniRef50_C4KB22 Transcriptional regulator, LysR family n=37 Tax=... 229 8e-59 UniRef50_Q2KYC5 LysR-family transcriptional regulator n=9 Tax=Bu... 229 1e-58 UniRef50_Q8XRG7 Probable transcriptional regulator transcription... 229 1e-58 UniRef50_B8E7T8 Transcriptional regulator, LysR family n=7 Tax=S... 229 1e-58 UniRef50_B7CP85 Transcriptional regulator, LysR family protein n... 228 2e-58 UniRef50_B5ET44 Transcriptional regulator n=1 Tax=Vibrio fischer... 228 2e-58 UniRef50_Q2G901 Transcriptional regulator, LysR family n=2 Tax=A... 228 2e-58 UniRef50_A1UXD8 Transcriptional regulator, LysR family n=41 Tax=... 228 2e-58 UniRef50_Q15TE0 Transcriptional regulator, LysR family n=4 Tax=A... 227 3e-58 UniRef50_A9C385 Transcriptional regulator, LysR family n=2 Tax=c... 227 3e-58 UniRef50_P46924 Probable HTH-type transcriptional regulator leuO... 227 3e-58 UniRef50_A6V8B0 Transcriptional regulator, LysR family n=10 Tax=... 227 4e-58 UniRef50_Q13GK2 Transcriptional regulator, LysR family n=1 Tax=B... 226 6e-58 UniRef50_Q08NF6 Transcriptional Regulator, LysR family n=1 Tax=S... 226 6e-58 UniRef50_Q9FD34 PnbR n=2 Tax=Pseudomonas RepID=Q9FD34_PSEPU 226 9e-58 UniRef50_C6BS61 Transcriptional regulator, LysR family n=1 Tax=D... 225 1e-57 UniRef50_Q5LN55 Transcriptional regulator, LysR family n=4 Tax=R... 225 1e-57 UniRef50_A0JW61 Transcriptional regulator, LysR family n=1 Tax=A... 225 1e-57 UniRef50_Q89IY7 Transcriptional regulatory protein n=1 Tax=Brady... 225 1e-57 UniRef50_Q5E2I6 DNA-binding transcriptional activator n=65 Tax=G... 225 1e-57 UniRef50_A8IJ97 Putative transcriptional regulator n=1 Tax=Azorh... 225 2e-57 UniRef50_A9FB16 Transcriptional regulator, LysR family n=3 Tax=S... 224 2e-57 UniRef50_Q1LD16 Transcriptional regulator, LysR family n=8 Tax=P... 224 2e-57 UniRef50_Q391Q9 Transcriptional regulator, LysR family n=1 Tax=B... 224 3e-57 UniRef50_A9FJR3 Transcriptional regulator, LysR family n=2 Tax=S... 224 3e-57 UniRef50_Q5DZ29 Transcriptional regulator, LysR family n=2 Tax=V... 224 3e-57 UniRef50_Q687Z9 LysR-type activator n=1 Tax=Sphingopyxis macrogo... 224 4e-57 UniRef50_Q486J0 Transcriptional regulator, LysR family n=4 Tax=G... 224 4e-57 UniRef50_A5F4D9 Transcriptional regulator, LysR family n=68 Tax=... 224 4e-57 UniRef50_A6W028 Transcriptional regulator, LysR family n=1 Tax=M... 224 4e-57 UniRef50_A9AQZ4 Transcriptional regulator, LysR family n=24 Tax=... 224 5e-57 UniRef50_B8ERS8 Transcriptional regulator, LysR family n=1 Tax=M... 223 5e-57 UniRef50_A1UYG7 Transcriptional regulator, LysR family n=45 Tax=... 223 5e-57 UniRef50_Q081K6 Transcriptional regulator, LysR family n=2 Tax=A... 223 6e-57 UniRef50_A7JRS0 Possible LysR family transcriptional regulator n... 223 6e-57 UniRef50_B7VJC4 Putative LysR-like regular protein n=4 Tax=Vibri... 222 1e-56 UniRef50_A1UYR8 Transcriptional regulator, LysR family n=32 Tax=... 222 1e-56 UniRef50_A3VWI6 Transcriptional regulatory protein n=1 Tax=Roseo... 222 1e-56 UniRef50_C5AL93 Transcriptional regulator, LysR family protein n... 222 1e-56 UniRef50_Q393U0 Transcriptional regulator, LysR family n=6 Tax=B... 222 2e-56 UniRef50_Q46T42 Regulatory protein, LysR:LysR, substrate-binding... 221 2e-56 UniRef50_B4E7M9 LysR family regulatory protein n=1 Tax=Burkholde... 221 2e-56 UniRef50_A5VCH0 Transcriptional regulator, LysR family n=1 Tax=S... 221 2e-56 UniRef50_C3MFM7 Putative transcriptional regulator, LysR family ... 221 2e-56 UniRef50_A7HRT9 Transcriptional regulator, LysR family n=1 Tax=P... 221 2e-56 UniRef50_C6B2W9 Transcriptional regulator, LysR family n=4 Tax=R... 221 2e-56 UniRef50_Q88LJ0 Transcriptional regulator, LysR family n=1 Tax=P... 221 2e-56 UniRef50_Q30XG7 Conserved hypothetical transcriptional regulator... 221 2e-56 UniRef50_Q0BPL7 Transcriptional regulators, LysR family n=1 Tax=... 221 2e-56 UniRef50_A3QJ07 Transcriptional regulator, LysR family n=25 Tax=... 221 3e-56 UniRef50_B6JAE3 MexT protein n=1 Tax=Oligotropha carboxidovorans... 221 3e-56 UniRef50_A4GJC2 Transcriptional regulator LysR family protein n=... 220 4e-56 UniRef50_Q471I4 Regulatory protein, LysR:LysR, substrate-binding... 220 4e-56 UniRef50_C6XR04 Transcriptional regulator, LysR family n=1 Tax=H... 220 4e-56 UniRef50_A1U8Q8 Transcriptional regulator, LysR family n=1 Tax=M... 220 4e-56 UniRef50_D0LQN8 Transcriptional regulator, LysR family n=1 Tax=H... 220 5e-56 UniRef50_A3KIZ0 Putative LysR-family transcriptional regulatory ... 220 6e-56 UniRef50_A7K354 LysR substrate binding domain protein n=17 Tax=G... 220 6e-56 UniRef50_A3VAM0 Nodulation protein d1 n=1 Tax=Rhodobacterales ba... 220 7e-56 UniRef50_B9B1S8 Transcriptional regulator, LysR family n=1 Tax=B... 219 7e-56 UniRef50_D1SW87 Transcriptional regulator, LysR family n=1 Tax=A... 219 8e-56 UniRef50_Q88I06 Nodulation protein d1 n=4 Tax=Gammaproteobacteri... 219 8e-56 UniRef50_A4Z170 Putative transcriptional regulatory protein, Lys... 219 9e-56 UniRef50_A8KZI9 Transcriptional regulator, LysR family n=4 Tax=A... 219 9e-56 UniRef50_C6DDI5 Transcriptional regulator, LysR family n=4 Tax=E... 219 1e-55 UniRef50_A0KIB7 Transcriptional regulator, LysR family n=2 Tax=A... 218 2e-55 UniRef50_A6ARN3 Transcriptional regulator, LysR family n=4 Tax=V... 218 2e-55 UniRef50_A5VEA0 Transcriptional regulator, LysR family n=1 Tax=S... 218 2e-55 UniRef50_C5CZA2 Transcriptional regulator, LysR family n=1 Tax=V... 217 4e-55 UniRef50_Q7MEL0 Transcriptional regulator n=18 Tax=Gammaproteoba... 217 4e-55 UniRef50_B5XRQ2 Transcriptional regulator, LysR family n=4 Tax=K... 217 4e-55 UniRef50_B2VHH8 Transcriptional regulator, LysR family n=1 Tax=E... 217 4e-55 UniRef50_B7VQ45 Transcriptional regulator n=8 Tax=Vibrionales Re... 217 4e-55 UniRef50_B4RWU1 Transcriptional regulator n=2 Tax=Alteromonas ma... 217 5e-55 UniRef50_Q085G5 Transcriptional regulator, LysR family n=1 Tax=S... 217 5e-55 UniRef50_Q0VH46 Putative LysR type regulator n=3 Tax=Proteobacte... 216 7e-55 UniRef50_A3RSL5 Transcriptional regulators, LysR family n=4 Tax=... 216 8e-55 UniRef50_A5V6I2 Transcriptional regulator, LysR family n=1 Tax=S... 216 8e-55 UniRef50_Q2BJ61 Transcriptional regulator, LysR family protein n... 216 1e-54 UniRef50_B8IVY8 Transcriptional regulator, LysR family n=4 Tax=P... 215 1e-54 UniRef50_C9PC13 Transcriptional regulator LysR family n=1 Tax=Vi... 215 1e-54 UniRef50_A9BZQ9 Transcriptional regulator, LysR family n=1 Tax=D... 215 1e-54 UniRef50_Q5E7C7 Transcriptional regulator, LysR family n=5 Tax=V... 215 2e-54 UniRef50_D2B6V0 LysR family transcriptional regulator n=5 Tax=Ac... 215 2e-54 UniRef50_C7RKX8 Transcriptional regulator, LysR family n=20 Tax=... 214 3e-54 UniRef50_A0NZC9 LysR family regulatory protein n=3 Tax=Rhodobact... 214 4e-54 UniRef50_B9J825 Nod transcriptional regulator protein n=1 Tax=Ag... 214 4e-54 UniRef50_Q2SHJ0 Transcriptional regulator n=1 Tax=Hahella chejue... 213 6e-54 UniRef50_Q399F7 Transcriptional regulator, LysR family n=1 Tax=B... 213 6e-54 UniRef50_Q9RBI3 SalR n=2 Tax=Acinetobacter RepID=Q9RBI3_ACIAD 213 7e-54 UniRef50_Q7MFJ9 Transcriptional regulator n=28 Tax=Vibrio RepID=... 213 7e-54 UniRef50_A5L763 Transcriptional regulator n=1 Tax=Vibrionales ba... 213 7e-54 UniRef50_Q0K3U9 Transcriptional regulator, LysR-family n=2 Tax=B... 213 7e-54 UniRef50_B6RAE8 Transcriptional Regulator, LysR family n=1 Tax=P... 212 9e-54 UniRef50_A4XRF8 Transcriptional regulator, LysR family n=2 Tax=P... 212 9e-54 UniRef50_C5A8T0 Transcriptional regulator, LysR family protein n... 212 1e-53 UniRef50_A8H681 Transcriptional regulator, LysR family n=2 Tax=G... 212 1e-53 UniRef50_A5KW47 Transcriptional regulator, LysR family protein n... 212 1e-53 UniRef50_P52698 HTH-type transcriptional regulator phcA n=16 Tax... 212 1e-53 UniRef50_B7VP76 Transcriptional regulator (Lys R family) n=2 Tax... 212 2e-53 UniRef50_Q3S4D5 LysR-like regular protein n=1 Tax=Polaromonas na... 212 2e-53 UniRef50_A4BGW0 Probable transcription regulator protein n=1 Tax... 212 2e-53 UniRef50_A5V8P8 Transcriptional regulator, LysR family n=1 Tax=S... 212 2e-53 UniRef50_B0C4T0 Transcriptional regulator, LysR family n=1 Tax=A... 211 2e-53 UniRef50_D0RZK6 Transcriptional regulator n=1 Tax=Acinetobacter ... 211 2e-53 UniRef50_A8FU12 Transcriptional regulator n=2 Tax=Gammaproteobac... 211 2e-53 UniRef50_Q15XJ4 Transcriptional regulator, LysR family n=1 Tax=P... 211 2e-53 UniRef50_Q2CCM2 Transcriptional regulator, LysR family protein n... 210 3e-53 UniRef50_Q1M9F6 Putative LysR-family transcriptional regulator n... 210 3e-53 UniRef50_Q7WJY9 Probable LysR-family transcription regulator n=1... 210 3e-53 UniRef50_B9Z7Z3 Transcriptional regulator, LysR family n=3 Tax=P... 210 3e-53 UniRef50_Q0B1J5 Transcriptional regulator, LysR family n=1 Tax=B... 210 4e-53 UniRef50_Q0BYJ0 Transcriptional regulator, LysR family n=1 Tax=H... 210 4e-53 UniRef50_UPI0001B54141 LysR family transcriptional regulator n=1... 210 4e-53 UniRef50_D1P3H6 Transcriptional regulator, LysR family n=1 Tax=P... 210 5e-53 UniRef50_A1WMY5 Transcriptional regulator, LysR family n=1 Tax=V... 210 5e-53 UniRef50_B2JTT0 Transcriptional regulator, LysR family n=3 Tax=B... 210 6e-53 UniRef50_Q11CG0 Transcriptional regulator, LysR family n=1 Tax=C... 210 6e-53 UniRef50_A4JED2 Transcriptional regulator, LysR family n=9 Tax=P... 209 8e-53 UniRef50_A6AYH0 Transcriptional regulator n=3 Tax=Vibrio parahae... 209 9e-53 UniRef50_Q15Y73 Transcriptional regulator, LysR family n=1 Tax=P... 209 1e-52 UniRef50_Q2CK92 Transcriptional regulator, LysR family protein n... 209 1e-52 UniRef50_B7QWJ8 Transcriptional regulator, LysR family n=1 Tax=R... 209 1e-52 UniRef50_C5CV67 Transcriptional regulator, LysR family n=1 Tax=V... 209 1e-52 UniRef50_A1U796 Transcriptional regulator, LysR family n=3 Tax=M... 209 1e-52 UniRef50_B0KG68 Transcriptional regulator, LysR family n=9 Tax=P... 209 1e-52 UniRef50_Q0BCW3 Transcriptional regulator, LysR family n=30 Tax=... 209 1e-52 UniRef50_A2SDX3 Transcriptional regulator, LysR family n=6 Tax=B... 209 1e-52 UniRef50_B9Z947 Transcriptional regulator, LysR family n=1 Tax=L... 208 2e-52 UniRef50_Q47ZN8 Transcriptional regulator, LysR family n=1 Tax=C... 208 2e-52 UniRef50_D0J6E9 Transcriptional regulator, LysR family n=2 Tax=C... 208 2e-52 UniRef50_B4S2V4 Transcriptional regulator, LysR family protein n... 208 2e-52 UniRef50_A8H854 Transcriptional regulator, LysR family n=1 Tax=S... 207 3e-52 UniRef50_B2I0F3 Transcriptional regulator n=11 Tax=Acinetobacter... 207 3e-52 UniRef50_A1K8D7 Transcriptional regulator, LysR family n=1 Tax=A... 207 4e-52 Sequences not found previously or not previously below threshold: UniRef50_D0LKM3 Transcriptional regulator, LysR family n=1 Tax=H... 233 5e-60 UniRef50_A9GGP1 LysR-family transcriptional regulator n=1 Tax=So... 230 3e-59 UniRef50_Q3JR86 LysR-family regultor n=70 Tax=Proteobacteria Rep... 222 1e-56 UniRef50_C9NXV6 Transcriptional regulator LysR family n=1 Tax=Vi... 219 1e-55 UniRef50_C4I668 Transcriptional regulator, LysR family n=80 Tax=... 218 2e-55 UniRef50_Q46YJ7 Transcriptional regulator, LysR family n=5 Tax=c... 217 4e-55 UniRef50_Q210Z5 Transcriptional regulator, LysR family n=2 Tax=A... 215 1e-54 UniRef50_D0LUZ7 Transcriptional regulator, LysR family n=1 Tax=H... 215 2e-54 UniRef50_A6VSJ2 Transcriptional regulator, LysR family n=28 Tax=... 213 5e-54 UniRef50_B2JFW9 Transcriptional regulator, LysR family n=39 Tax=... 212 2e-53 UniRef50_C5CZY6 Transcriptional regulator, LysR family n=1 Tax=V... 211 2e-53 UniRef50_B1J7P4 Transcriptional regulator, LysR family n=5 Tax=P... 210 4e-53 UniRef50_Q7D3I0 Transcriptional regulator, LysR family n=1 Tax=A... 208 2e-52 UniRef50_Q7NT25 Probable transcription regulator protein n=1 Tax... 208 2e-52 UniRef50_Q4KHX1 Transcriptional regulator, LysR family n=1 Tax=P... 207 3e-52 UniRef50_Q5QVJ9 Transcriptional regulator, LysR family n=1 Tax=I... 207 4e-52 >UniRef50_P77746 Uncharacterized HTH-type transcriptional regulator ybdO n=94 Tax=Enterobacteriaceae RepID=YBDO_ECOLI Length = 300 Score = 387 bits (994), Expect = e-106, Method: Composition-based stats. Identities = 300/300 (100%), Positives = 300/300 (100%) Query: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS Sbjct: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 Query: 61 GKGIAPTTTGLNLHHHLEKNLRGLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCL 120 GKGIAPTTTGLNLHHHLEKNLRGLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCL Sbjct: 61 GKGIAPTTTGLNLHHHLEKNLRGLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCL 120 Query: 121 RQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNR 180 RQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNR Sbjct: 121 RQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNR 180 Query: 181 HPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAV 240 HPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAV Sbjct: 181 HPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAV 240 Query: 241 TDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 TDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF Sbjct: 241 TDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 >UniRef50_UPI0001826721 hypothetical protein EcanA3_12211 n=1 Tax=Enterobacter cancerogenus ATCC 35316 RepID=UPI0001826721 Length = 299 Score = 289 bits (741), Expect = 6e-77, Method: Composition-based stats. Identities = 157/296 (53%), Positives = 214/296 (72%) Query: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 MANLYDLKKFDLNLLVIFECIYQ+LSISKAAE+LYITPSAVSQSLQRLR Q NDPLFIRS Sbjct: 1 MANLYDLKKFDLNLLVIFECIYQNLSISKAAETLYITPSAVSQSLQRLRNQLNDPLFIRS 60 Query: 61 GKGIAPTTTGLNLHHHLEKNLRGLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCL 120 GKGI PTT G+NLHHHLE+NL LEQTINI++ S LKKNF+IY PQ+++ + I+ L Sbjct: 61 GKGITPTTVGVNLHHHLEQNLNQLEQTINIMHSSGLKKNFVIYCPQILTPNILLDPIKLL 120 Query: 121 RQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNR 180 + EIE HD+++S ++AE LL +RKADLV PV +RS+ C H ++ L+C Sbjct: 121 MDKHNYEIELHDVMVSPDSAENLLAYRKADLVFAIAPVNNRSLACNLFHKLQMNLVCRKG 180 Query: 181 HPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAV 240 HPR++ + T + ++ E+F +S +GV Q +I+ R +SFR S LTI++ + V Sbjct: 181 HPRLSVSPTRQDLLNEKFAAYLSDGSGVKTFQEKIEHALPERTVSFRSDSYLTILSMLTV 240 Query: 241 TDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRL 296 +DL+G+VP + Y D L LK ++ + +P++ +++ YN+S+LN+ VFS FI+ + Sbjct: 241 SDLVGVVPENAFRQYGDALGLKVLETDIAIPTVDIFMLYNRSALNSSVFSSFIEEI 296 >UniRef50_C9XYN5 Uncharacterized HTH-type transcriptional regulator ybdO n=3 Tax=Cronobacter RepID=C9XYN5_CROTZ Length = 334 Score = 284 bits (728), Expect = 2e-75, Method: Composition-based stats. Identities = 139/300 (46%), Positives = 191/300 (63%) Query: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 MANL DLKKFDLNLLVIFECIY + S+SKAAE+L++TPSA+SQSLQRLR Q NDPLF+RS Sbjct: 15 MANLQDLKKFDLNLLVIFECIYLYRSVSKAAEALFLTPSAISQSLQRLRNQLNDPLFVRS 74 Query: 61 GKGIAPTTTGLNLHHHLEKNLRGLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCL 120 GKGI PTT G NLHH+LE NL LEQTIN++ + L+KNF++Y P ++ + L+ Sbjct: 75 GKGITPTTVGTNLHHYLEDNLNQLEQTINMMQGAPLRKNFVLYCPPALAADHLPGLVSAF 134 Query: 121 RQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNR 180 R+ E+E +D +++E AE+LL +RKADL+I PV S SVIC + L+CS Sbjct: 135 REHYDFELEHYDTSLASETAEDLLAYRKADLIIGMAPVTSHSVICKHCFSEETVLVCSEN 194 Query: 181 HPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAV 240 HPR+ D++ + E+FT + G ++ E R+I+F +SL +I+ I Sbjct: 195 HPRLGDHADDAALAQEKFTLFNGTAEGQKHYHVKSGELIGERQIAFTSNSLSSIMAIIGS 254 Query: 241 TDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 TD +GI+P YR L+ +KL LP Y+ YN++SL N F F+ + + F Sbjct: 255 TDFIGILPAPALRRYRQVFGLRPVKLNFSLPHYDYYLIYNRASLTNASFVSFVSLIEQHF 314 >UniRef50_B9Z480 Transcriptional regulator, LysR family n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z480_9NEIS Length = 303 Score = 271 bits (693), Expect = 2e-71, Method: Composition-based stats. Identities = 72/295 (24%), Positives = 127/295 (43%), Gaps = 5/295 (1%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 ++ D+ LL +F+ IY+ S+++AA++L + AVS +L +LR F+DPLF+R G+ P Sbjct: 1 MQTADVRLLQVFDEIYKTRSVTRAADNLGLGQPAVSIALAKLREHFDDPLFVRIANGMEP 60 Query: 67 TTTGLNLHHHLEKNLRGLEQTIN---IVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQD 123 T L H + + L L+ + + ++ F I + L LR+ Sbjct: 61 TPMARELEHAVRQALDALDLVFGHRIDFDPASSERTFCISMTDISQLVLLPKLWAQLRK- 119 Query: 124 SSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPR 183 +S + + +SAE +L +ADL + MP + L R + S HPR Sbjct: 120 TSPGVHIDIVPLSAETP-RMLETGEADLALGFMPQLEAGFYQQSLFRQRYVCVASTDHPR 178 Query: 184 ITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDL 243 I D T Q EE + S G + EI + + R I+ R + L I + TD+ Sbjct: 179 IHDELTLAQFETEEHAVVTSSGTGHLILDREIARQGITRHIALRVPNYLGIAFVVEQTDM 238 Query: 244 LGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 L +P L + + LP + +++ ++ +++ Sbjct: 239 LVTIPERLAQVLEGRGRFRVFPVPFELPDYAVKQHWHERYHHDPGNRWLRRVISD 293 >UniRef50_Q2S713 Transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S713_HAHCH Length = 329 Score = 270 bits (691), Expect = 3e-71, Method: Composition-based stats. Identities = 64/293 (21%), Positives = 132/293 (45%), Gaps = 3/293 (1%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 ++ DLNLLVIF+ I SIS AAE L +T AVS ++ R+R +NDPLF+++G+GI P Sbjct: 1 MRNIDLNLLVIFDAIMTESSISGAAERLSMTQPAVSNAVARMRQVWNDPLFVKNGRGIQP 60 Query: 67 TTTGLNLHHHLEKNLRGLEQTINI--VNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDS 124 TT L+L H + L L+ +N + S ++ F + + + + +R + + Sbjct: 61 TTHALSLWHQVSGPLIQLKDAVNPQDFDPSTTRRRFRVGMSDITTDLIW-LPMRRMVETE 119 Query: 125 SVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRI 184 + I+ H + + N+E +L + + DL++ M S L HP Sbjct: 120 APNIDLHAVPANGNNSESILTNGEVDLIVGVMQEFRTSFRNDFLFESDYVCAMRKDHPLA 179 Query: 185 TDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLL 244 + T E+ + + + + + + ++ ++R+++ + ++ + +DL+ Sbjct: 180 AEPLTLEKYLKADHLLVSLTGEATGFVDITLSQQGLSRRVAMTVNHFASVPALLEGSDLI 239 Query: 245 GIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLN 297 IVP + +L K + + + ++ + +++ Sbjct: 240 SIVPNMVIAKGAKCGSLHVTKPPLEIRPTPVSMIWHARHDRDPGVLWLREKIK 292 >UniRef50_B1KAV0 Transcriptional regulator, LysR family n=5 Tax=Burkholderia cepacia complex RepID=B1KAV0_BURCC Length = 345 Score = 267 bits (683), Expect = 3e-70, Method: Composition-based stats. Identities = 66/298 (22%), Positives = 132/298 (44%), Gaps = 5/298 (1%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 D+++ DLNLL +F+ + + +++A S+ ++ A+S +L +LR F DPLF+R+G+G+ Sbjct: 1 MDIRQVDLNLLKVFDALLKKRHVTQAGVSIGLSQPAMSYALSKLRELFEDPLFVRTGRGM 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 PT L + + L ++ I +E +NF++ + L L Sbjct: 61 EPTPRAQALGEPVARLLDLVQTEILPMPEFRPAESSRNFVLCMSDIGEMVFLPRLESFLD 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVI-SRSVICMPLHTIRNTLICSNR 180 + + + + +S EE L DL I P + S S+ L+ I + Sbjct: 121 KAAP-HVSIKTVALSMPELEEGLASGDVDLAIGYFPGLNSESLKRKALYRHSYVCIARDD 179 Query: 181 HPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAV 240 HP I D + +Q A + + D + + + + F + + +A Sbjct: 180 HPEIGDTLSLDQYRAAAHVMVHPEGREQDVLARTHERLGIRVNVRFSTPRFIGVPFVVAG 239 Query: 241 TDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 +D++ VP + + +F+N+K + L P P+ +LY+ ++ + D ++E Sbjct: 240 SDMIAAVPQAVGRRFAEFVNVKLLPLPFPAPTYELYLHWHPRFHHEPANRWIRDAMSE 297 >UniRef50_Q5LKP3 Transcriptional regulator, LysR family n=1 Tax=Ruegeria pomeroyi RepID=Q5LKP3_SILPO Length = 324 Score = 265 bits (677), Expect = 2e-69, Method: Composition-based stats. Identities = 71/299 (23%), Positives = 129/299 (43%), Gaps = 5/299 (1%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 DL+K DLNLLV FE IY +IS AA+ L ++ +S +L RLR DPLFIRSG+G+ Sbjct: 1 MDLRKLDLNLLVTFEAIYTAGNISHAAKRLNVSQPTISNALARLRDTVGDPLFIRSGRGV 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 APT + + L+ ++ + S ++NF I ++ L+R ++ Sbjct: 61 APTPRATGMIGPVRDALQMIQSGFGDDERFDPSTTRRNFRIVVLDMLEPILMPPLVRAVQ 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 SV +E ++ E L DL +T + C + + ++ H Sbjct: 121 DYRSVTLEMLPVMDFP--IAEGLNDGSLDLALTTFDPQHGDIECEQVGAAKIVIVARKGH 178 Query: 182 PRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVT 241 PRI T + LI K + + + ++R I + + + + +A + Sbjct: 179 PRIKGEMTPALVSEIGHVALIPKIRALSRVDEVLRYAKIDRHIVYMVTRFWSFPHILANS 238 Query: 242 DLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 DL+ ++P + F L + P +Y+ + K + + +++ E++ Sbjct: 239 DLIAMMPGDFAAHAALFYPLDIFPVPFEFPEQHIYMIWKKRHGLDPGHTWLREKIVEAY 297 >UniRef50_D2YJX0 Transcriptional regulator, LysR family n=1 Tax=Vibrio mimicus VM573 RepID=D2YJX0_VIBMI Length = 314 Score = 264 bits (676), Expect = 2e-69, Method: Composition-based stats. Identities = 78/298 (26%), Positives = 146/298 (48%), Gaps = 4/298 (1%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 L+ +DLNLL +F+ + S++KAA+ L +T +AVSQ+L RLR Q +PLFIR G+G+ P Sbjct: 15 LRDYDLNLLTVFDAVMTLGSVNKAADKLNMTSAAVSQNLSRLRDQVGEPLFIRQGRGLQP 74 Query: 67 TTTGLNLHHHLEKNLRGLE---QTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQ- 122 T LN+H H+ L + +T + + + F+I G L+R + + Sbjct: 75 TQYALNMHKHVSAGLSAIRFGLETNACFDPATSTREFVIGGHGYFDLVVLPQLLRKISEV 134 Query: 123 DSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHP 182 + + ++L R+ADL + +P+ S+I + ++ + HP Sbjct: 135 APHITVNLKPYEDDHFTPSQVLSEREADLFLASLPISHPSIITTQIAEEALVVVYAKNHP 194 Query: 183 RITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTD 242 R+ + T++Q E+ T L S+ G +D+ RK+ ++ S+L ++ + +VTD Sbjct: 195 RLGETLTFQQFFDEKHTALTSRRFGHYLFSSLLDQALPARKVHYQSDSMLNLMATASVTD 254 Query: 243 LLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 LL P L + + + L L L + + ++ ++K+ + +++ E F Sbjct: 255 LLCFTPKRLADMWAEKLGLHIQPLPFEMRPVPTFMCWHKAKQQDKGLIWLREQIEEVF 312 >UniRef50_A5F3E5 Transcriptional regulator, LysR family n=29 Tax=Vibrio RepID=A5F3E5_VIBC3 Length = 308 Score = 264 bits (675), Expect = 3e-69, Method: Composition-based stats. Identities = 79/295 (26%), Positives = 148/295 (50%), Gaps = 4/295 (1%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 L+ +DLNLL +F+ + + S+SKAA+ L +T +AVSQ+L RLR Q DPLFIR G+G+ P Sbjct: 4 LRDYDLNLLTVFDSVMKLGSVSKAADKLGMTSAAVSQNLSRLREQVGDPLFIRQGRGLQP 63 Query: 67 TTTGLNLHHHLEKNLRGLE---QTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQ- 122 T LN+H H+ + L + +T + + K+ FII G L++ + Sbjct: 64 TQYALNMHKHVAEGLSAIRFGLETDAGFDPATSKREFIIGGQGYFDLVVLPPLLQKISDI 123 Query: 123 DSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHP 182 + + ++L R+ADL + +P+ S++ + ++ + HP Sbjct: 124 APHITVNLKSYEDDHFTPSQVLSEREADLFLAALPISHPSIVTTQVAEEALVVVYAKNHP 183 Query: 183 RITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTD 242 R+ ++EQ AE+ T L S+ G +D+ R++ ++ S+L ++ + +VTD Sbjct: 184 RLGSTLSFEQFFAEKHTALTSRRFGNYLFSSLVDQVLPARRVHYQSESMLNLMATASVTD 243 Query: 243 LLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLN 297 LL P L + + + L L+ L + S+ ++ ++K+ + +++ Sbjct: 244 LLCFTPKRLADMWAEKLGLQIQPLPFEIRSVPTFMCWHKAKQQDKGLIWLREQIE 298 >UniRef50_Q473Q1 Transcriptional regulator, LysR family n=9 Tax=Burkholderiaceae RepID=Q473Q1_RALEJ Length = 315 Score = 263 bits (673), Expect = 4e-69, Method: Composition-based stats. Identities = 67/299 (22%), Positives = 123/299 (41%), Gaps = 4/299 (1%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 L + DLNL V+F+ IY SI+ AA L +T AVS +L RLR F+DPLF R G+G+ Sbjct: 4 MQLSRIDLNLFVVFDAIYSEGSITAAARQLNLTQPAVSHALGRLRGLFDDPLFERRGQGM 63 Query: 65 APTTTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 APT +L + L+ +T+ + + + F I + + L+ + Sbjct: 64 APTPLARSLASEVRSALQSFARTLQDTPHFDPTNTVRRFTIGMRDALESTLLPPLMARVT 123 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 + ++E I E L+ D I + +S ++ ++ H Sbjct: 124 SVAP-QVEIAAIRFDRREMESELLAGTIDAAIDILLPVSPAIHHAQFMADPMIVLARRDH 182 Query: 182 PRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVT 241 P + T E+ +A E + S+ G + + R++ R ++ T Sbjct: 183 PLVKKELTLERYLAAEHVHVSSRRRGAGLEDQALHRMGLTRRVRLRCQHYAAACRVVSCT 242 Query: 242 DLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 DLL +P + + + L +PS++L++ ++ N+ ++L Sbjct: 243 DLLATLPLRYARIANEPYANRILSLPFKVPSLELHLYWHAGGENDGANRWLREQLMAVM 301 >UniRef50_A0LD88 Transcriptional regulator, LysR family n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LD88_MAGSM Length = 312 Score = 261 bits (667), Expect = 2e-68, Method: Composition-based stats. Identities = 64/292 (21%), Positives = 123/292 (42%), Gaps = 4/292 (1%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 L KFDLNLLV F+ + +++A L IT +A+S +L+RLR F+DPLFI++G + P Sbjct: 9 LNKFDLNLLVAFDALMSERGVTRAGRRLGITQAAMSNTLRRLRTAFDDPLFIKTGARMEP 68 Query: 67 TTTGLNLHHHLEKNLRGLEQTIN--IVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDS 124 T + L +E L+ + ++ + + F + L+ L + + Sbjct: 69 TPRAMELSGMIEAALKQVHVALDNDSFDPANSHYVFRVGMVDYTVPLVFPALLDHLEKYA 128 Query: 125 SVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRI 184 I +++ + + E+L + DLV++++ R + + I I HP I Sbjct: 129 PNCI--LEVVNTGDFEGEMLESGEVDLVLSRLDQAPRGLKSRVVGEIPFVCIYRPGHPLI 186 Query: 185 TDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLL 244 + T EQ + + + + R + R S + +A TDL+ Sbjct: 187 KEPMTLEQYLQARHVHYYPPMVKEGLVDLGLKAINQERNVVVRLDSFGMVPTLVAETDLI 246 Query: 245 GIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRL 296 V + + + LK L P ++ + ++ S + F +++ Sbjct: 247 AAVTHTSAHVIAPAMGLKVQPLPFEAPPLQFVMVWHDRSEESAPHQWFREQV 298 >UniRef50_A6EYC4 LysR family regulatory protein n=1 Tax=Marinobacter algicola DG893 RepID=A6EYC4_9ALTE Length = 300 Score = 261 bits (666), Expect = 3e-68, Method: Composition-based stats. Identities = 68/297 (22%), Positives = 136/297 (45%), Gaps = 6/297 (2%) Query: 6 DLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIA 65 +L+ DLNLL +F+ I + +S+AA+SL ++ A+S +LQRLR DPLF+R+ +G+ Sbjct: 4 NLRSVDLNLLPVFDAIMEAGQLSRAADSLGMSQPAISAALQRLRHTLGDPLFVRTHQGMV 63 Query: 66 PTTTGLNLHHHLEKNLRGLEQTINIVN---KSELKKNFIIYGPQLISCSNNSMLIRCLRQ 122 PT LH L + L + T++ N ++ F + L+ LR Sbjct: 64 PTPRARELHRSLSQQLGAMRDTLDPANRFVPGTSQRRFRVLSNDYFEMVVLPTLLTRLRS 123 Query: 123 DSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHP 182 ++ + ++ ++ ++ + L +ADL + + + L R ++ HP Sbjct: 124 EAPNVV--VEVALAGDDMPQRLYTAEADLAVDAFATENDRLRRQVLLAERLAVVARKDHP 181 Query: 183 RITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTD 242 + D+ + +Q + E L ++ + + ++E R+ R + +++ + + +D Sbjct: 182 DLWDDCSKQQFLDAEHVVLPDRNRRL-PLDQILNEPGWQRRTGARVTQFASMLATCSRSD 240 Query: 243 LLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNES 299 ++ VP L Y LK + +P + +Y+ + N+ F RL ES Sbjct: 241 MIATVPERLAQQYARAFGLKTLPFPVEVPPLPVYLLWAPVMDNDPAHIWFRQRLMES 297 >UniRef50_B5XZT9 Transcriptional regulator, LysR family n=5 Tax=Klebsiella RepID=B5XZT9_KLEP3 Length = 310 Score = 261 bits (666), Expect = 3e-68, Method: Composition-based stats. Identities = 144/298 (48%), Positives = 194/298 (65%), Gaps = 1/298 (0%) Query: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 MANLYDLKKFDLNLLVIFECIYQHLSISKAA L+ITPSAVSQSLQRLR Q NDPLF+R Sbjct: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAAMLFITPSAVSQSLQRLRQQLNDPLFVRV 60 Query: 61 GKGIAPTTTGLNLHHHLEKNLRGLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCL 120 GKG+ PTT +NLH+HL++NL LE+TIN+ N+SEL+K +IYGP L N+ +I L Sbjct: 61 GKGMTPTTACVNLHYHLQQNLEQLEKTINLNNRSELRKRIVIYGPPLFCSVNSHFMINEL 120 Query: 121 RQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNR 180 ++++IE H++ + E+AEELL +R+ADLV T+MP+ +R+ IC P T++ +C Sbjct: 121 CHQANLQIEHHNLT-TTESAEELLAYRQADLVFTRMPITNRATICQPYQTVQTLAVCRAD 179 Query: 181 HPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAV 240 HPR ++ E + E FT I+ + +Q I+FR S +TI+N I Sbjct: 180 HPRRDQLTSIEALAQEFFTHYITNDPVIQRVQQSSTPWLNPGNIAFRSDSFMTILNMINK 239 Query: 241 TDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 TDL+G +P LY+ + L + +E P I +YI+Y++SS N S I L Sbjct: 240 TDLIGFIPSYLYDFISPAMPLHALDIEALFPEITIYINYHQSSTQNHFLSELISILMN 297 >UniRef50_Q2S7V2 Transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S7V2_HAHCH Length = 310 Score = 260 bits (664), Expect = 5e-68, Method: Composition-based stats. Identities = 62/299 (20%), Positives = 125/299 (41%), Gaps = 4/299 (1%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 + + DLNL V+F+ IY I++A+E L++T AVS +L RLR D LFIRS +G+ Sbjct: 1 MHISRIDLNLFVVFDAIYSEGGITRASEVLHLTQPAVSHALNRLRETLGDELFIRSSRGM 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 PT L + + L L++ + ++L+ +F + L LI+ R Sbjct: 61 TPTPYAHQLIGTVRQALNQLQRGLHQGQEFAPAQLETSFRLCVRDLFDVLLLPALIKNCR 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 + ++ + + E L + DL + S+ L R T + H Sbjct: 121 AIAP-KVVFNCLRSPREQILHDLASGRIDLAADVLISHDDSICHEKLFEDRLTCLLRRDH 179 Query: 182 PRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVT 241 P + + +++ Q+ S+ G +++ + RK+ R + + A + Sbjct: 180 PALASEWSLAEMLRWPHVQVSSREHGPGYEDIQLSRHGLQRKLGLRTPNFYGAALTAANS 239 Query: 242 DLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 DL+ P ++ + L+ + L ++ Y+ +++S+ ++ + Sbjct: 240 DLILCAPEQVARKLTQTIPLQVMPFPLTLNPLETYLYWHRSTDREPAHIWLREQTQRAL 298 >UniRef50_B4X4B4 LysR substrate binding domain protein n=1 Tax=Alcanivorax sp. DG881 RepID=B4X4B4_9GAMM Length = 304 Score = 259 bits (661), Expect = 1e-67, Method: Composition-based stats. Identities = 68/297 (22%), Positives = 131/297 (44%), Gaps = 6/297 (2%) Query: 6 DLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIA 65 +L+ DLNLL +F+ I + +S+AAESL ++ A+S +LQRLR F D LF+R+ G+ Sbjct: 4 NLRSIDLNLLPVFDAIMEAGQLSRAAESLGMSQPAISAALQRLRHTFGDTLFVRTHHGMT 63 Query: 66 PTTTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCLRQ 122 PT LH L L L T+N + + +++F I L+ LRQ Sbjct: 64 PTPRARELHDQLGPQLVALRDTLNPENRFDPATSQRHFRILSVDYFEMVVLGPLLATLRQ 123 Query: 123 DSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHP 182 + +I+ + ++ + L +ADL + + L + +I HP Sbjct: 124 QAP--HVVLEIIAADDDMPDELHKGRADLSVDAFVADDDRLQRNVLLEEKLVVIARRSHP 181 Query: 183 RITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTD 242 I + +Q + E L +++ + + ++ R+ R + +++ +D Sbjct: 182 HIKGHCDKQQFLDAEHVVLPNRNRQL-PLDQILNAPGWQRRTGARVTQFASMLAVCGGSD 240 Query: 243 LLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNES 299 L+ VP L Y + + L+ + LP + +Y+ ++ + + +L + Sbjct: 241 LIATVPDRLAQQYAETMQLQVLPFPVALPPVPIYMIWSPTQQRDPAHRWLRQQLEHT 297 >UniRef50_Q2IYM8 Transcriptional regulator, LysR family n=2 Tax=Rhodopseudomonas palustris RepID=Q2IYM8_RHOP2 Length = 317 Score = 258 bits (659), Expect = 2e-67, Method: Composition-based stats. Identities = 64/303 (21%), Positives = 136/303 (44%), Gaps = 5/303 (1%) Query: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 MA + +L+ DLNLL++F+ +Y +IS AA L ++ AVS +L RLR F+DPLF+R+ Sbjct: 1 MATI-NLRNVDLNLLIVFDAVYATGNISHAARQLALSQPAVSNALTRLREHFDDPLFVRA 59 Query: 61 GKGIAPTTTGLNLHHHLEKNLRGLEQTIN---IVNKSELKKNFIIYGPQLISCSNNSMLI 117 G+G+ PT + + + LR + Q + ++ K+ F I + ++ Sbjct: 60 GRGVKPTLRSQQMIEPVREALRLIRQQFDGDRSLDLGSYKRTFRIVIVDPLEAMLMPTML 119 Query: 118 RCLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLIC 177 R + + ++ N + ++ DL PV + ++ + + ++ Sbjct: 120 REISAHAP-QVTIESRPPWNTNVADAIIAGTLDLACYTFPVSAPGLVFKTICPCDHVIVA 178 Query: 178 SNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINS 237 HP+I E ++ LI + G +I +I R NR+I++ + + ++ Sbjct: 179 RRGHPKIGATLDAETFLSLAQVALIPELRGHTNIDRDITTRGGNRRIAYMVNKVWSMPGV 238 Query: 238 IAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLN 297 + TDL+ ++P L+ + P+ ++ +++ + ++ D + Sbjct: 239 VGSTDLVTVMPRRFAELMAPKFGLQIFESPIPISPQDYHMIWHEKNTDDPGHKWLRDTMV 298 Query: 298 ESF 300 ++ Sbjct: 299 KAM 301 >UniRef50_A9G5G2 Nodulation protein D n=2 Tax=Proteobacteria RepID=A9G5G2_SORC5 Length = 366 Score = 258 bits (659), Expect = 2e-67, Method: Composition-based stats. Identities = 58/303 (19%), Positives = 121/303 (39%), Gaps = 9/303 (2%) Query: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 M +D+ DLNL+ + + +++A + L +T SA S +L RLR F DPLF+R+ Sbjct: 57 MPAFHDVASVDLNLVRVLGALLDERHLTRAGKRLGLTQSATSHALGRLRRLFGDPLFVRT 116 Query: 61 GKGIAPTTTGLNLHHHLEKNLRGLEQTINIVNKS---ELKKNFIIYGPQLISCSNNSMLI 117 +G+APT L + + +R L++ ++F + S L+ Sbjct: 117 SRGLAPTARAEELAEPVREAMRALDRCFRAEEPFVAASAARSFSVATADYGSFVLAPKLL 176 Query: 118 RCL-RQDSSVEIECHDILMSAENAEELLVHRKADLVITQ--MPVISRSVICMPLHTIRNT 174 L R+ +V++ + S EE L AD+V+ + + L+ R Sbjct: 177 DRLGREAPNVDLWLRALDASF---EEQLARGDADVVVAPARRDGLPAGIHSRLLYRERFA 233 Query: 175 LICSNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTI 234 + HP + + + + + + + R+++ L Sbjct: 234 CLVRKGHPLVKKGIDLASWTSMRHVFIAPRGTPGGVVDETLAQLGKRRRVALAVPHFLLA 293 Query: 235 INSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFID 294 + +A +DL+ V + ++ + L L+ + LP ++ + +++ + F D Sbjct: 294 PHVVAGSDLVVTVGARVAEAFAEILPLRVVDPPVKLPGFEVRMYWHERHHRDPAQQWFRD 353 Query: 295 RLN 297 + Sbjct: 354 AVR 356 >UniRef50_C6XIT5 Transcriptional regulator, LysR family n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XIT5_HIRBI Length = 318 Score = 257 bits (658), Expect = 3e-67, Method: Composition-based stats. Identities = 60/294 (20%), Positives = 122/294 (41%), Gaps = 4/294 (1%) Query: 8 KKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPT 67 KKFDLNLL F+ +++ ++++AA L +T AVS +L RLR F D LFIR+ G+ PT Sbjct: 3 KKFDLNLLNTFDALWRERNVTRAARRLNVTQPAVSNALSRLRETFGDELFIRTPSGVDPT 62 Query: 68 TTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDS 124 + + + LR +E+T+ + + + ++ F I L+ LR+ + Sbjct: 63 ERCSEIAIDVREALRHVERTLASHDSFDPTVSERTFRIGAMDYFDHVVLPPLMEDLRKKA 122 Query: 125 SVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRI 184 ++ + + L D + + + P+ + LI HP++ Sbjct: 123 P-RVDLRISPVKLGETYDALDSGDLDFLFFSGTEPPKRINFSPMLEEKFVLIMRANHPKM 181 Query: 185 TDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLL 244 T + ++ I + E + R+++ S +I ++ TD++ Sbjct: 182 CQEMTLDAYADLTHIVFSTRGDSHTRIDDLLAENGLRRRVALTSSHHTSIAETVRDTDMV 241 Query: 245 GIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 + P L + Y L ++ P L + +++ ++ + L + Sbjct: 242 ALSPSRLAHRYVHRGGLIAVQPPVEFPHFHLRLYWSRRLNSDPGAMWLRNILGD 295 >UniRef50_Q5P743 Transcriptional regulator, LysR family n=2 Tax=Betaproteobacteria RepID=Q5P743_AZOSE Length = 301 Score = 257 bits (656), Expect = 5e-67, Method: Composition-based stats. Identities = 69/296 (23%), Positives = 120/296 (40%), Gaps = 7/296 (2%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 ++ ++ L +F+ IY+ S+S+AAE+L + AVS +L +LR F DPLF+R+ G+ P Sbjct: 1 METLEIRQLSVFDEIYKTRSVSRAAENLGLGQPAVSIALGKLREHFGDPLFVRTSAGMEP 60 Query: 67 TTTGLNLHHHLEKNLRGLEQTIN---IVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQ- 122 T G L + + + + + ++ F I + L LR Sbjct: 61 TPLGEELAEPIRVAVAAVSAASGHRAEFDPTRARRTFRIAMTDISQLVLLPRLWERLRTV 120 Query: 123 DSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHP 182 + I+ ++ + N +L + D+ + MP + L + S HP Sbjct: 121 APGIHIDIANL---SANTAGMLESGEVDVALGFMPQLEAGFYQQALFRQHYVCMASATHP 177 Query: 183 RITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTD 242 RI T Q AEE + + G I EI + + R++ R S + I + T Sbjct: 178 RIRRGLTLAQFEAEEHAVVSTSGTGHLIIDREIARQDIKRRVVLRIPSFVGIAYVVERTA 237 Query: 243 LLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 LL +P L D L+ + PLP + ++ N+ + E Sbjct: 238 LLVTIPQRLGELLADEERLRVYPVPFPLPEYAVKQHWHGRYNNDPGNRWLRALIQE 293 >UniRef50_A6T413 Transcriptional regulator, LysR family n=1 Tax=Janthinobacterium sp. Marseille RepID=A6T413_JANMA Length = 302 Score = 256 bits (655), Expect = 5e-67, Method: Composition-based stats. Identities = 63/301 (20%), Positives = 131/301 (43%), Gaps = 6/301 (1%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 ++ DLNLLV F+ I + +++ AA L ++ A+S +L RLR FNDPLF+R+ +G+ Sbjct: 1 MNIASVDLNLLVAFDAIVKERNVTSAAVRLGVSQPAMSNALARLRIIFNDPLFVRTSQGM 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 PT L + + + + ++ + + K F Y ++ L++ + Sbjct: 61 QPTPYAEQLIEPVSRACELITSALQINSVFDPATTTKTFSFYMTEIGEILLLPKLLKHI- 119 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 Q ++ + + A+E + + + DL + P + L+T + I H Sbjct: 120 QVAAPNACVRVRRIPEQGAKEAMANGEIDLAVGLFPYLKAGFYQQRLYTDKFACIVRQGH 179 Query: 182 PRITDNSTYEQIMAEEFTQLISKSAGVD-DIQMEIDERFMNRKISFRGSSLLTIINSIAV 240 P + D+ T +Q + ++S + G D I+ + + RKI + L + I Sbjct: 180 PTVHDSLTPQQYVDTPHVIVMSANTGHDAAIEKILLTEHLRRKIVMTSQNFLVLPMIIEQ 239 Query: 241 TDLLGIVPYELYNSYRDFL-NLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNES 299 TD + +P+ + + +K ++ P P++ + +++ + D + Sbjct: 240 TDAIATIPFRMAQKIASYSTGIKILESPIPFPNVDIKQHWHERFHYDPANKWMRDLMVTL 299 Query: 300 F 300 F Sbjct: 300 F 300 >UniRef50_Q1XGL2 Transcriptional activator NahR n=3 Tax=root RepID=Q1XGL2_PSEPU Length = 374 Score = 256 bits (655), Expect = 5e-67, Method: Composition-based stats. Identities = 59/286 (20%), Positives = 113/286 (39%), Gaps = 4/286 (1%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 +L+ DLNLLV+F + +S AE+L +T AVS +L+RLR DPLF+R+ +G+ Sbjct: 1 MELRDLDLNLLVVFNQLLVDRRVSITAENLGLTQPAVSNALKRLRTSLQDPLFVRTHQGM 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 PT +L + + L + + ++ F + + L+ L Sbjct: 61 EPTPYAAHLAEPVTSAMHALRNALQHHESFDPLTSERTFTLAMTDIGEIYFMPRLMDVLA 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 + + + S+ + + L + DL + +P + L +C H Sbjct: 121 HQAPNCV-ISTVRDSSMSLMQALQNGTVDLAVGLLPNLQTGFFQRRLLQNHYVCLCRKDH 179 Query: 182 PRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVT 241 P + T E+ + ++I+ G ++ + + R I + + + T Sbjct: 180 PVTREPLTLERFCSYGHVRVIAAGTGHGEVDTYMTRVGIRRDIRLEVPHFAAVGHILQRT 239 Query: 242 DLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNL 287 DLL VP L + + L + LP I + + ++ Sbjct: 240 DLLATVPIRLADCCVEPFGLSALPHPVVLPEIAINMFWHAKVPQGP 285 >UniRef50_P10183 HTH-type transcriptional activator nahR n=67 Tax=Bacteria RepID=NAHR_PSEPU Length = 300 Score = 256 bits (654), Expect = 7e-67, Method: Composition-based stats. Identities = 61/299 (20%), Positives = 118/299 (39%), Gaps = 4/299 (1%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 +L+ DLNLLV+F + +S AE+L +T AVS +L+RLR DPLF+R+ +G+ Sbjct: 1 MELRDLDLNLLVVFNQLLVDRRVSITAENLGLTQPAVSNALKRLRTSLQDPLFVRTHQGM 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 PT +L + + L + + ++ F + + L+ L Sbjct: 61 EPTPYAAHLAEPVTSAMHALRNALQHHESFDPLTSERTFTLAMTDIGEIYFMPRLMDVLA 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 + + + S+ + + L + DL + +P + L +C H Sbjct: 121 HQAPNCV-ISTVRDSSMSLMQALQNGTVDLAVGLLPNLQTGFFQRRLLQNHYVCLCRKDH 179 Query: 182 PRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVT 241 P + T E+ + ++I+ G ++ + + R I + + + T Sbjct: 180 PVTREPLTLERFCSYGHVRVIAAGTGHGEVDTYMTRVGIRRDIRLEVPHFAAVGHILQRT 239 Query: 242 DLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 DLL VP L + + L + LP I + + ++ +L + + F Sbjct: 240 DLLATVPIRLADCCVEPFGLSALPHPVVLPEIAINMFWHAKYHKDLANIWLRQLMFDLF 298 >UniRef50_A1U2R6 Transcriptional regulator, LysR family n=3 Tax=Marinobacter RepID=A1U2R6_MARAV Length = 300 Score = 256 bits (654), Expect = 7e-67, Method: Composition-based stats. Identities = 65/293 (22%), Positives = 117/293 (39%), Gaps = 1/293 (0%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 L + DLNLL +F+ IY+ S+++AA++L++T A+S SL RLR FNDPLF R G + P Sbjct: 3 LNRPDLNLLHVFDTIYREGSLTRAAKALHLTQPAISHSLARLRDHFNDPLFTRQGNQMVP 62 Query: 67 TTTGLNLHHHLEKNLRGLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQ-DSS 125 T + L ++ +N + + Y L ++ L + + + Sbjct: 63 TPLARRFLESMRPGLNQIQSAVNQFHAFDPASQRKTYALGLRDVLESTFLPQLISKLAPY 122 Query: 126 VEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRIT 185 ++E ++ + E L K D I + +S L R ++ HP I Sbjct: 123 PDMEVQSQRVARRDMETQLAAGKLDFAIDVLLPVSNQTSHELLRQDRLVVLARKGHPVIA 182 Query: 186 DNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLG 245 + + S++ G E+ R I R + +DLL Sbjct: 183 QGLDMASYLEARHILVSSRAEGPGIEDFELSRHGAQRTIRLRCQHYYAACRVVESSDLLL 242 Query: 246 IVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 +P +++ + +PSI +++ ++K+ F D L Sbjct: 243 TMPETYARIIAQNTDIEVLAPPVEMPSIDVHLYWHKAYEQEPALVWFRDLLRN 295 >UniRef50_B0C5B7 Transcriptional regulator, LysR-family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C5B7_ACAM1 Length = 300 Score = 255 bits (651), Expect = 2e-66, Method: Composition-based stats. Identities = 64/296 (21%), Positives = 124/296 (41%), Gaps = 7/296 (2%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 DL+ FDLNLLV+ + + S+SK AE L ++ AVS +L RLR DP+ +R G + Sbjct: 1 MDLRGFDLNLLVVLHILLKERSVSKTAERLQLSQPAVSAALNRLRTALKDPILVRDGLQM 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 PT L ++ + +EQT+ + S + + F I + L+ ++ Sbjct: 61 VPTPRAEQLVEPVQAIVSAIEQTLADPQPFDYSSISRTFRIATNDYGAFVLVPFLMNRMQ 120 Query: 122 Q-DSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNR 180 + + E DI + + E L + DLVI + L + T + Sbjct: 121 KIAPHLTFEIWDIAL---DVETALREGEIDLVIADAWTLRNCKCRKTLFSETFTCLVRQN 177 Query: 181 HPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAV 240 HPR+ T + + E+ + ++ ++ + + ++ R++ +L I +A Sbjct: 178 HPRVDTQLTMDDYLQEKHALVSARGRVTGNVDIALSQQNKQRQVQITLPHILAIPAMMAA 237 Query: 241 TDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRL 296 TD++ V + N + +L+ L + +++ N+ + L Sbjct: 238 TDMIVTVATRIANRFAVDYHLQTFPPPITLDGFDIAMAWPHRMDNDTAIRWLRNEL 293 >UniRef50_C3KKF8 Putative transcriptional regulatory protein, LysR-family n=1 Tax=Rhizobium sp. NGR234 RepID=C3KKF8_RHISN Length = 304 Score = 255 bits (651), Expect = 2e-66, Method: Composition-based stats. Identities = 59/296 (19%), Positives = 113/296 (38%), Gaps = 4/296 (1%) Query: 6 DLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIA 65 ++ DLNLLV+F+ + ++AAE + +T AVS +L RLRA F DPLF+RS +G+ Sbjct: 5 NIASIDLNLLVVFDALVAEGHATRAAERIGLTQPAVSHALNRLRALFGDPLFVRSPRGMV 64 Query: 66 PTTTGLNLHHHLEKNLRGLEQTIN---IVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQ 122 T L+ + L +E ++ E + F++ + L L + Sbjct: 65 ATPAALDAAPAIRSILEQVEVVLSGGPAFEPEESTRQFVLGLSDYAAFVLLPRLTARLER 124 Query: 123 DSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHP 182 ++ I S +L +L+ P + L+ HP Sbjct: 125 EAP-NISLVIRNTSHGVGLPMLEEGSVELIAGNFPGPPSHMREELLYEEDFVCAGRGDHP 183 Query: 183 RITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTD 242 + ++ ++ Q+ ++ + + ER + RK++ L + +D Sbjct: 184 ALAYPLDLDRYLSLRHLQVSTRGNPHGYVDAVLAERGLKRKVAVTVGHFLMAPFLVDSSD 243 Query: 243 LLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 L+ P L+ L L+ LP ++ +++ + L E Sbjct: 244 LVATEPRRLFEPMPSRLPLRFFAPPIDLPPFRVVQAWHARHEADPGHQWLRRVLRE 299 >UniRef50_Q7MC61 Transcriptional regulator n=9 Tax=Gammaproteobacteria RepID=Q7MC61_VIBVY Length = 313 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 73/295 (24%), Positives = 129/295 (43%), Gaps = 4/295 (1%) Query: 9 KFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTT 68 DLNLL F+ + + S+++AAE+L IT AVS +L RLR Q+ DPLFIR G+GI PT Sbjct: 14 TMDLNLLKTFDVVMKTRSVNEAAETLGITAPAVSHALNRLRDQYQDPLFIRQGRGITPTN 73 Query: 69 TGLNLHHHLEKNLRGLEQ---TINIVNKSELKKNFIIYGPQLISCSNNSMLIRCL-RQDS 124 + LH +++ L L + N + F + + I L+ L + Sbjct: 74 FAIELHAEIQEPLSLLLNGAKSRQQFNPDTSHRTFRLSSHKDIDLMLLPPLMDHLAQHAP 133 Query: 125 SVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRI 184 +V++ + + + L RK D+++ +P L + ++C HPRI Sbjct: 134 NVKLCADVEHLDERDRQADLRTRKVDMILATVPFDEHGYHNELLFELPLVMVCRQDHPRI 193 Query: 185 TDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLL 244 + T++Q AE+ +K D + E R I+++ S I A TD + Sbjct: 194 QNTITHQQFFAEQHLLWETKRQNQDIVDSLALEPQPQRNIAYKTGSSCNAIMMAAQTDWI 253 Query: 245 GIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNES 299 + + L+ + L L + +Y++++ S + L ++ Sbjct: 254 CVTGQWHADLMAKAHQLQVMPLPFKLNKLPIYMTWHHSQQQDSGHQWLKSALMQA 308 >UniRef50_A8GKS5 Transcriptional regulator, LysR family n=1 Tax=Serratia proteamaculans 568 RepID=A8GKS5_SERP5 Length = 314 Score = 254 bits (648), Expect = 4e-66, Method: Composition-based stats. Identities = 67/301 (22%), Positives = 123/301 (40%), Gaps = 7/301 (2%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 +LK DLNLLV+F+ I++ S+ A + L I+ AVS +L RLR F+DP+F+R + Sbjct: 1 MNLKNVDLNLLVVFDAIFRQRSVGLAGQMLGISQPAVSHALARLRQLFDDPMFVRINNEM 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 PT L +E+ L + + + + ++ + P + LI L Sbjct: 61 RPTDRASELMPSVERVLSMIRDDVLQPVGFDPAANRRTLTLCMPDIGEQYFLPPLINHLA 120 Query: 122 Q-DSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRS-VICMPLHTIRNTLICSN 179 Q + + H++ + EE L + DL I P + R+ L Sbjct: 121 QVAPGMAVVSHEL--APAQLEEALESGRVDLAIGYFPDLRRAVFYQQRLFYSGFCCAVRQ 178 Query: 180 RHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIA 239 HP+I + Q + E + + + + E+ + R + + S L++ IA Sbjct: 179 GHPQIGKTLSLPQFLQAEHVTARLRIRSQEIAEQAMREQGIVRNVKLQTSHFLSLTQIIA 238 Query: 240 VTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNES 299 TDLL V YE + + + P+P + +++ + ++ + Sbjct: 239 QTDLLATVTYEAAQLLQAAGKVHIYPVPFPIPQFPVMQYWHERAHHDRGNQWLRGEIRGL 298 Query: 300 F 300 F Sbjct: 299 F 299 >UniRef50_B8KV86 Putative transcriptional regulator, LysR family n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KV86_9GAMM Length = 302 Score = 253 bits (647), Expect = 5e-66, Method: Composition-based stats. Identities = 61/295 (20%), Positives = 117/295 (39%), Gaps = 4/295 (1%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 +L+ DLNLL IF+ I +++ AA+ + ++ A+S +L RLR +D LF+ +G+G+ Sbjct: 1 MNLRSVDLNLLTIFDAIVSEGNLTHAADKIGMSQPAISAALGRLRVTLDDELFVSTGRGV 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 PT L L + + L + + + + F I L+R L+ Sbjct: 61 KPTQRALQLQEPVRRILEDVRAALTSTGEFDPESSDRVFTISSIDYGGIVVIPRLLRYLQ 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 + S I + A + DL IT P++S C L + H Sbjct: 121 KQQSP-IIVNINPSQTGEAHRDVDRSSGDLTITSDPLLSPDHECKLLRRELPYCLARKDH 179 Query: 182 PRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVT 241 P IT + + EQ L S + + + + NR+ R S + + T Sbjct: 180 PDITGSLSVEQFQRNRHVLLYSNNTRGLALDAHLLQLGFNRECGARVPSFFNMPYIVGNT 239 Query: 242 DLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRL 296 D++ +P ++ + L+ + + ++ +++S + D + Sbjct: 240 DMICTMPRQMAEDFARQFGLQVLAAPFDNWTASYFMVWHRSFNGDSGHCWLRDSI 294 >UniRef50_B7WQP0 Transcriptional regulator, LysR family n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WQP0_COMTE Length = 295 Score = 252 bits (645), Expect = 9e-66, Method: Composition-based stats. Identities = 68/292 (23%), Positives = 125/292 (42%), Gaps = 1/292 (0%) Query: 10 FDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTT 69 D+ LL +F+ IY+ S+S+A E+L + ++VS +L RLR FND LF+R+ +G+ PT Sbjct: 1 MDMKLLSVFDEIYKTRSVSRAGENLGLAQTSVSLALGRLRRAFNDQLFVRTSEGMLPTPR 60 Query: 70 GLNLHHHLEKNLRGLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSVEIE 129 L L + L L+ + + + + + S+ L + + ++ + Sbjct: 61 AAALVPQLRQALELLQSATRQQAEFDPASSSRAFRLAMTDISHLEFLPALMNKLGNIAPK 120 Query: 130 CH-DILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRITDNS 188 ++L + LL ADL I MP + L + HPRI DN Sbjct: 121 VRVEVLRITADTARLLEAGDADLAIGYMPELDAGFYQQKLFRDGFACVVRRTHPRIDDNL 180 Query: 189 TYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLGIVP 248 T + E + + G + ++ E+ + R ++ +L + N +A TDL+ VP Sbjct: 181 TMTRFKTERHVIITAPGTGNEIVEQELKRQGAQRNVALSLPTLPGVGNLLAHTDLIATVP 240 Query: 249 YELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 + + + +K I + LP + +++ + L E F Sbjct: 241 HRIAQTLVKIAQVKAIASPYRLPEFAIKQHWHERYQQDPANRWLRSTLAELF 292 >UniRef50_Q13QG3 Transcriptional regulator, LysR family n=9 Tax=Proteobacteria RepID=Q13QG3_BURXL Length = 316 Score = 252 bits (644), Expect = 1e-65, Method: Composition-based stats. Identities = 64/293 (21%), Positives = 120/293 (40%), Gaps = 4/293 (1%) Query: 11 DLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTTG 70 DLNLL +F I S++ A E L +T AVS +L+RLRA F+DPLF+R+ G+ PT Sbjct: 10 DLNLLRVFLAISDLRSLTAAGERLGLTQPAVSHALRRLRALFDDPLFVRTPTGMVPTDAA 69 Query: 71 LNLHHHLEKNLRGLE---QTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSVE 127 L LH L + + Q I + + ++ F + + L+ L + + Sbjct: 70 LRLHAPLTQAFGIINVAVQQIARFDPATAQRVFRVSMSDMSEFYFLPPLLSMLDRSAR-G 128 Query: 128 IECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRITDN 187 I +S ++ + + DL + +P + + L + + HP Sbjct: 129 IRLEIANVSVDSVSSAMRSGEIDLALGYVPGLDTGCVSKTLFVDEHVCVVRAGHPLRKQK 188 Query: 188 STYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLGIV 247 T E + + + + G ++ ++E + R I R + + TDL I Sbjct: 189 PTKEDLANLRYVYASTNATGHRMVEQWLEELNLRRDIVLRLPHFVVAPEIVQHTDLAMIF 248 Query: 248 PYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 P + + + + L LP I++ + + + + +D + + F Sbjct: 249 PRSIAQRFNRNKAFRILPLPFALPPIEIQVHSHSQFSADPGIAWLLDAIYDMF 301 >UniRef50_Q3KA14 LysR family regulatory protein n=24 Tax=Bacteria RepID=Q3KA14_PSEPF Length = 314 Score = 251 bits (641), Expect = 2e-65, Method: Composition-based stats. Identities = 70/299 (23%), Positives = 128/299 (42%), Gaps = 10/299 (3%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 +L K DLNL ++F+ IY ++++A + + IT AVS +L RLR FNDPLF+R+ +G+ Sbjct: 1 MNLSKVDLNLFIVFDAIYTEANLTRAGQIVGITQPAVSNALARLRETFNDPLFVRTAQGM 60 Query: 65 APTTTGLNLHHHLEKNLRGLE---QTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 PT N+ + L L Q I N S+ K + I L L + LR Sbjct: 61 VPTPMAQNIIGPVRNALSLLRVSVQESRIFNPSQAVKTYRISMTDLTEAVILPPLFQRLR 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 + + I + E +E L + D + V + L R H Sbjct: 121 RLAPTVIIESFLSKRRETTKE-LAAGRLDFAVDAPLNTDPQVRHVKLMEDRYVCAMRKGH 179 Query: 182 PRITDN-STYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAV 240 P T T + ++ + S+ +G+ + + + + + RKI+ R L + Sbjct: 180 PLATKEKFTLDDYLSLTHIHISSRRSGLGHVDLALGKMGIQRKIALRSQHYLMASQVLQQ 239 Query: 241 TDLLGIVPYELYNSYRDFLNLKEIKLEH-PLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 TD++ VP + +L L +P ++ ++ +++S+ + +++ E Sbjct: 240 TDMVMTVPERFARRH----DLHAFNLPVNDVPPVETHLYWHESTDQDPANRWMREQMIE 294 >UniRef50_A1WRT3 Transcriptional regulator, LysR family n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WRT3_VEREI Length = 315 Score = 250 bits (640), Expect = 3e-65, Method: Composition-based stats. Identities = 67/298 (22%), Positives = 120/298 (40%), Gaps = 3/298 (1%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 DL +F+LNLL F+ IY+H S+S AA+ L +T AV+ +L +LR F++PLF+R+ G+ Sbjct: 1 MDLSEFNLNLLTFFDAIYRHRSVSAAAQELDLTQPAVTAALNKLRVHFDNPLFVRTSNGM 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTINI--VNKSELKKNFIIYGPQLISCSNNSMLIRCLRQ 122 PT L + L + + K F IY + +++ L Q Sbjct: 61 HPTPWADALAPKIAHVLDSVRRLDEPTPFQPQSAKNQFKIYVNDIGMMLALPKIVQLLNQ 120 Query: 123 DSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHP 182 D+ + I + + L + DL I + L HP Sbjct: 121 DAP-HTQLTVIDLRQDEVVNALDVGEIDLAIGYFVGVPNWARQQHLRDTSYVCAMRKDHP 179 Query: 183 RITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTD 242 I D T Q + + + + + +R +R I+ R L I A +D Sbjct: 180 SIGDTMTLTQYLNARHAMYWTHGSTYGRLDEALAKRGFSRDIAVRIPRLGAIPFLAAFSD 239 Query: 243 LLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 + +P +L +RD + +K + + LPS ++ +++ + + + Sbjct: 240 FVVTIPEDLGLLFRDLIPIKLVPVPISLPSFQVKQYWHERLHADSAHKWLRTLILQIM 297 >UniRef50_Q15UP0 Transcriptional regulator, LysR family n=4 Tax=Alteromonadales RepID=Q15UP0_PSEA6 Length = 305 Score = 250 bits (638), Expect = 5e-65, Method: Composition-based stats. Identities = 70/298 (23%), Positives = 126/298 (42%), Gaps = 9/298 (3%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 +L + DLNL +F+ IY S++KAA+ L IT AVS SL RLR NDPLF+R+G + Sbjct: 1 MNLNRIDLNLFAVFDAIYTAGSLTKAADVLCITQPAVSNSLARLREMLNDPLFVRTGHSM 60 Query: 65 APTTTGLNLHHHLEKNLRGLE---QTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 PT N+ + L L Q + + + + ++ L+ S L L Sbjct: 61 TPTPAAQNIIGPAREALGLLRKSVQESHTFDPATAEISYNFAARDLLEASIMPRLTAQL- 119 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMP-VISRSVICMPLHTIRNTLICSNR 180 Q+ + I + +S N + D + + + R +I Sbjct: 120 QNVAPNITLTNYDISRSNIVSAMASGSLDFYADASSAFVDPHLCKQKIAEDRFVVIARRN 179 Query: 181 HPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAV 240 HP ++ + + + + G I + +D+ + R++ RG LT+ I Sbjct: 180 HPALSQGLNLDTFLQLGHINISQRRTGAGPIDVALDKLNLKRRVVMRGQHFLTVPAVIVK 239 Query: 241 TDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 TDL+ VPY L Y + +L L ++ ++ ++ S+ ++ +++ E Sbjct: 240 TDLIACVPYHLAKHY----DCSIYELPFELAPVEYFLYWHVSADHDHAHMWLREQIAE 293 >UniRef50_Q12M05 Transcriptional regulator n=3 Tax=Gammaproteobacteria RepID=Q12M05_SHEDO Length = 309 Score = 250 bits (638), Expect = 5e-65, Method: Composition-based stats. Identities = 67/294 (22%), Positives = 129/294 (43%), Gaps = 4/294 (1%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 + K DLNLLVIF+ I + SIS AAE L +T +VS ++ R+R + DPLFI+ G+GI P Sbjct: 5 MSKLDLNLLVIFDAIMKEQSISAAAEQLAMTQPSVSNAVARMRHNWKDPLFIKQGRGIKP 64 Query: 67 TTTGLNLHHHLEKNLRGLEQTINI--VNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDS 124 + L L + L + ++ N + ++ F I S L R L + + Sbjct: 65 SPFALALWQQVASPLEQIRSAVSSKTFNAAHSERTFRIAITDGTSGLFWPALRRHLERHA 124 Query: 125 SVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRI 184 +I H + + E LLV+ + DLV+ ++ L + + + H Sbjct: 125 P-KINLHAVPYKLDG-EALLVNAEVDLVLDYYENRHPQILSQHLFDNQFVCVMAKAHALS 182 Query: 185 TDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLL 244 T + A E + + ++ + +R+I+ +S + I + L+ Sbjct: 183 EKTLTLDDFAAAEHLLVSLSGDASGTVDRKLAQLGHSRRIAMTVNSFASAKTLIEESRLI 242 Query: 245 GIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 +PY + S++ L L +PS+ + ++++ + ++ + + + Sbjct: 243 STLPYSIIASWQSLDKLTVKTLPFTVPSVPISMAWHSRNDASISLRWLREAIVD 296 >UniRef50_C6ARG9 Transcriptional regulator, LysR family n=7 Tax=Proteobacteria RepID=C6ARG9_RHILS Length = 310 Score = 250 bits (638), Expect = 5e-65, Method: Composition-based stats. Identities = 59/293 (20%), Positives = 117/293 (39%), Gaps = 4/293 (1%) Query: 9 KFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTT 68 K+DLNLL +F + + ++++AAE L +T AVS +L RLR DPLFIR G+ PT Sbjct: 2 KYDLNLLPVFVALMEERNVTRAAEQLGMTQPAVSNALNRLRETLRDPLFIRERYGMKPTE 61 Query: 69 TGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSS 125 L + L L+ I + + + F I + +++ LR+ + Sbjct: 62 MAEALAPVIRGALASLDDVILGQQAFDPARATRQFTIAPNSYVEFVLMPVIVARLRECAP 121 Query: 126 VEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRIT 185 I + AE + ++V+ ++ +++ L + HP I Sbjct: 122 -GIRLRLTPFGNDLAETGAMSGATEMVLGRIVEPPDNMVVQHLMDDGLACVVRKDHPEIA 180 Query: 186 DNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLG 245 ++ + EQ ++ + + + + R +S + L + +AVTD Sbjct: 181 ESISEEQYQRMRHVNVLPPGRMRVGLFQMLQQAGLRRDVSVSVTHFLAVPEMVAVTDYCA 240 Query: 246 IVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 +P + + LK + L + ++++ N+ ++E Sbjct: 241 TLPRLICHRLARDPRLKVLPAPVDLGRFPVELAWHVRYRNDPAHRWLRSLISE 293 >UniRef50_Q1MWN1 LysR-type regulatory protein n=1 Tax=Sphingomonas sp. A4 RepID=Q1MWN1_9SPHN Length = 302 Score = 249 bits (637), Expect = 7e-65, Method: Composition-based stats. Identities = 72/296 (24%), Positives = 132/296 (44%), Gaps = 4/296 (1%) Query: 4 LYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKG 63 + ++ DLNLL +FEC++Q + +AAE L I+ AVS +L++LR ND LF+R+ G Sbjct: 1 MVKIRDVDLNLLRVFECVFQTRKVVEAAEILGISQPAVSNALKKLRELLNDELFVRTRSG 60 Query: 64 IAPTTTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCL 120 + PT + L + L+ LE I + K++F+I L LI + Sbjct: 61 MIPTQYAMQLAEPISYALKTLEIAIEASESFDPRRDKRHFVIATSDLGDMYFGPKLISHI 120 Query: 121 RQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNR 180 R D S +I + S + E L + + D+++ P + ++ L ++ Sbjct: 121 R-DISQDITIEFVGNSRPHIFESLENGEVDILLGFRPDLITNMFVFRLFYQGWRILARKD 179 Query: 181 HPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAV 240 HP + + E ++A + + S+ +G + E+ + M+R I S+ T+ +AV Sbjct: 180 HPIFSSKAPREDLLACRWIGVRSEGSGSASVNAELLKVGMDRNIVVWTSNFGTLAPLLAV 239 Query: 241 TDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRL 296 DL VP + LK + LP + ++ + N+ ++ Sbjct: 240 GDLAACVPEIYTTVIDEAFGLKSMPFPVDLPKHSISSVWHSKAHNDPANQWLRQQV 295 >UniRef50_A1W256 Transcriptional regulator, LysR family n=2 Tax=Comamonadaceae RepID=A1W256_ACISJ Length = 323 Score = 249 bits (636), Expect = 9e-65, Method: Composition-based stats. Identities = 58/308 (18%), Positives = 115/308 (37%), Gaps = 15/308 (4%) Query: 6 DLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIA 65 + + DLNLL +F+ + ++++AAE L IT AVS +L+RLR D L R G G+ Sbjct: 5 NFRTLDLNLLRVFDEVMAERNLTRAAEKLAITQPAVSNALRRLREVLGDELVTRRGHGVE 64 Query: 66 PTTTGLNLHHHLEKNLRGLEQTINI--VNKSELKKNFIIYGPQLISCSNNSMLIRCLRQD 123 PT L L + L L++T++ + + + F++ + LI + ++ Sbjct: 65 PTPRALALWPAVRHALAQLQETLSPGRFDPASAQTTFVLAMADATGATLIPPLIEIVERE 124 Query: 124 SSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSV------------ICMPLHTI 171 + + + ++ + LL AD+ + P + + L+ Sbjct: 125 AP-GVSLRVVPLTTRDPRRLLDEESADMAVGYFPAVLADLTARAQSDNVVAHESTRLYDS 183 Query: 172 RNTLICSNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSL 231 + + HP T + A + I + R+I + Sbjct: 184 QYVCVMRADHPLAAVPMTLDLYCAARHLLVSFSGKPFGFIDGALAALGRERRIVLTVNQF 243 Query: 232 LTIINSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSR 291 T +A TDLL ++P L L LP + + +++ ++ Sbjct: 244 FTAGRVVATTDLLTVLPRHFVGVASVRDELVWRPLPMTLPPVHVDALWHRRRNHDPAHRW 303 Query: 292 FIDRLNES 299 + + + Sbjct: 304 LREAIARA 311 >UniRef50_Q13JD9 Transcriptional regulator, LysR family n=1 Tax=Burkholderia xenovorans LB400 RepID=Q13JD9_BURXL Length = 305 Score = 248 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 63/303 (20%), Positives = 128/303 (42%), Gaps = 5/303 (1%) Query: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 M DLNL+ F IY+ S+S AA L +T VS +L RLR +DPLF R+ Sbjct: 2 MPGTMQTASTDLNLIRAFVAIYETGSVSAAARRLNLTQPTVSYALSRLRTLLHDPLFSRT 61 Query: 61 GKGIAPTTTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLI 117 +G+APT L+ + L +E I + + + F I L ++ Sbjct: 62 REGMAPTFNASQLYETFRQALDRIEGAIAATRYFDAATSTRCFRIALSDLGELYFLPRMV 121 Query: 118 RCLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLIC 177 L++ + +E + + E E L + D + + ++ L + + + Sbjct: 122 ERLQRTAP-GVELEVVQLDVERTAEWLNTGQIDAAVGNLHLVGGKARRRYLFSETYSCLV 180 Query: 178 SNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINS 237 S+RHP I + + + + + S+G ++ + ++RKI+ R +++ Sbjct: 181 SHRHPWIGTTLSLGDYVRAKHV-VGASSSGHRLVEDVMTGMGLSRKIALRVPHFTNVVDV 239 Query: 238 IAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLN 297 +A +DL+ +P + N Y+ ++ + L P+ + + + + + + + Sbjct: 240 VAGSDLVLTLPARVANVYQSTGTVRALPLPVPVDPFDVNLYWQDRATDLSAQKWLCEIIA 299 Query: 298 ESF 300 E+ Sbjct: 300 ETL 302 >UniRef50_Q7W2A6 Transcriptional regulator n=3 Tax=Bordetella RepID=Q7W2A6_BORPA Length = 313 Score = 247 bits (631), Expect = 4e-64, Method: Composition-based stats. Identities = 68/294 (23%), Positives = 130/294 (44%), Gaps = 7/294 (2%) Query: 8 KKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPT 67 K DLNLL+IF+ I +++AAE L ++ SAVS+ L +LR F DPLF+R+ +G+ PT Sbjct: 4 KHLDLNLLMIFDAILAEGHVTRAAERLAMSQSAVSKGLAQLRQAFGDPLFLRASRGVVPT 63 Query: 68 TTGLNLHHHLEK---NLRGLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQ-D 123 L + + + L L + + +F I +S L+R L++ Sbjct: 64 HRALEIADQVRQAIAALNSLAGPVTEFDARSAHAHFNIGATDYVSFVLLPGLMRRLQETA 123 Query: 124 SSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPR 183 V + HD M + EE+L+ K DLVI+ + ++ + L +C HP Sbjct: 124 PHVSLTLHD--MESMMPEEMLLAGKVDLVISSVASVNFPIYRQELFRDHYVCLCRAGHPA 181 Query: 184 ITDNSTYEQIMAEEFTQLISKSAGVDDIQME-IDERFMNRKISFRGSSLLTIINSIAVTD 242 + D EQ ++ + ++ + + + + + R ++ + +L I ++ TD Sbjct: 182 LADPVPIEQFVSSRHLAMPRQNGARERVLQDTLQRLGVTRDVAVQVPHMLAIPATLTATD 241 Query: 243 LLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRL 296 L+ + + + L+ + PLP + ++ + + D + Sbjct: 242 LVATMACRVAREFAARHPLQVLAHPLPLPDFPVSQLWHDRTRRSPSHQWLRDTV 295 >UniRef50_A9AQX4 Transcriptional regulator, LysR family n=20 Tax=Proteobacteria RepID=A9AQX4_BURM1 Length = 315 Score = 246 bits (629), Expect = 6e-64, Method: Composition-based stats. Identities = 65/297 (21%), Positives = 122/297 (41%), Gaps = 8/297 (2%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 L K DLNL V+F+ IY ++++AAE L +T AVS +L R+R NDPLF+ + G+ P Sbjct: 20 LSKIDLNLFVVFDAIYNKRNLTRAAELLNLTQPAVSNALARMRKTLNDPLFVSTPAGMMP 79 Query: 67 TTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQD 123 T N+ + + L+ L+ ++ ++ + + ++ F + L L L++ Sbjct: 80 TPFAENIVGRVREALQLLDSSVHEGDVFDPASSERVFRLSMSDLTEALLLPALGELLQRQ 139 Query: 124 SSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPR 183 + + M L + D+ I + + PL R + + HP Sbjct: 140 AP-GMHVRSYTMDRREIATALANGTVDIAIDAPLLGDPHLHQAPLVRDRYACMIRDGHPF 198 Query: 184 ITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDL 243 D T + +A + S+ G + E+ + R I R + DL Sbjct: 199 KGDTLTMDDYLAMGHIHVSSRRKGSGHVDAELTRLGLRRNIQMRVQHYMVAPLIAMRGDL 258 Query: 244 LGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 P L Y + ++L +P ++ + +++S+ + +RL E Sbjct: 259 ALTAPLRLLQRY----PARILELPFEMPGLEYFCYWHRSADQDQANRWLRERLAELM 311 >UniRef50_B7VQ63 Transcriptional regulators, LysR family n=3 Tax=Vibrionales RepID=B7VQ63_VIBSL Length = 304 Score = 246 bits (629), Expect = 7e-64, Method: Composition-based stats. Identities = 71/299 (23%), Positives = 135/299 (45%), Gaps = 3/299 (1%) Query: 4 LYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKG 63 + D++K DLNLL +F +Y+ SI+ A+ESL +T VS +L+RL+AQ LFIR G+G Sbjct: 1 MSDMEKLDLNLLSVFLEVYRLKSITLASESLGMTQPGVSGALKRLQAQLGTDLFIREGRG 60 Query: 64 IAPTTTGLNLHHHLEKNLRGLEQTINIVNKSELKKN--FIIYGPQLISCSNNSMLIRCLR 121 I PT + L +E L G+ ++ + + + +++ F I + I + L+ Sbjct: 61 ITPTNAAMQLALRVEPALDGITSAVSTLKQFDNQQHHVFRILVNE-IGLTKLQPLVEKDD 119 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 ++ IE + + + E+ + L ++ADL I + + LI H Sbjct: 120 TLGNISIEFNMVPSNEEDLLQSLSMQQADLAIDIHYPQVNGYMNQQVIEDELVLIAKKGH 179 Query: 182 PRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVT 241 PRI + T Q E+ + + + RK+S SL+T+ ++ + Sbjct: 180 PRIDGSVTEAQYYHEKHITFRMRRSHLYTADYFTKNPIQQRKVSSECDSLMTMCVLVSGS 239 Query: 242 DLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 D +G N + + L+ ++ + +K Y+ ++K + N ++ + Sbjct: 240 DCVGSTSRGFANQFAERFQLQVLEQPFEVLPMKQYMIWHKRTDLNTAHQWLRTKIQQHM 298 >UniRef50_A0LD87 Transcriptional regulator, LysR family n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LD87_MAGSM Length = 322 Score = 245 bits (627), Expect = 1e-63, Method: Composition-based stats. Identities = 58/296 (19%), Positives = 125/296 (42%), Gaps = 4/296 (1%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 ++L KFDLNLLV F+ + +++A +L IT +A+S +L+RLR F+DPLF+++G + Sbjct: 8 HNLNKFDLNLLVAFDTLMTERGVTRAGRALGITQAAMSNTLRRLRELFDDPLFVKTGSSM 67 Query: 65 APTTTGLNLHHHLEKNLRGLEQTINI--VNKSELKKNFIIYGPQLISCSNNSMLIRCLRQ 122 PT + L + L + + +N + +NF + S L+R + Q Sbjct: 68 EPTPRAIELSTPVALALEEVRKALNQEGFDPMMASENFRLGMIDYASAMLMPGLVRHMSQ 127 Query: 123 DSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHP 182 + + + + + L DLV ++ + V L ++ + HP Sbjct: 128 VAP-RAKMQVVDVGGDEEVANLERGAVDLVFSRFQWVPPKVCINRLFSMEYVAVFCPNHP 186 Query: 183 RI-TDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVT 241 + + + + +A + + + E R I + +S + +A + Sbjct: 187 GVEGGSLSMDAFLASRHVHYYPRGMDNTVVDETLAEMGEKRNIIGKLASFGMLPAMLASS 246 Query: 242 DLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLN 297 ++ ++P L L+ KL P +++ ++++ + + F ++ Sbjct: 247 HVMAVMPEGAAKVVARPLGLRVEKLPFKTPLLRMALAWHPRTDRDPSHVWFRQQVK 302 >UniRef50_Q39AY8 Transcriptional regulator, LysR family n=1 Tax=Burkholderia sp. 383 RepID=Q39AY8_BURS3 Length = 331 Score = 245 bits (626), Expect = 1e-63, Method: Composition-based stats. Identities = 56/307 (18%), Positives = 122/307 (39%), Gaps = 8/307 (2%) Query: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 M + DL+ DLNLL++F+ +Y+ S ++AA++L++T +VS +L+RLR F+D LF+++ Sbjct: 17 MEHDPDLRNIDLNLLLVFDVLYRTRSTTRAADALHLTQPSVSNALKRLRTLFDDALFVKT 76 Query: 61 GKGIAPTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLI 117 G+ PT + +++ L L + + + + F +Y L L+ Sbjct: 77 ADGMQPTPRADAIAARVDEGLASLRTALQAGRAFDPATSTRTFRLYTSDLGQAIFMPPLV 136 Query: 118 RCLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLIC 177 LR+ + I + A++++ + DL + + L + Sbjct: 137 AHLRRVAP-GIRIVTADPPLDAAQQMMKLGQIDLALGMFTGLHADFHQQRLFHETYVALV 195 Query: 178 SNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDER----FMNRKISFRGSSLLT 233 N HP I T EQ A + + + + R + + + Sbjct: 196 RNDHPMIGATLTAEQFFAADHVSYTPTAGSHAHFEAALYALSPHAGSTRHVVLQLAHSFG 255 Query: 234 IINSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFI 293 + ++ +DL+ +P L +++ + L + +++ + Sbjct: 256 LERIVSSSDLIACIPSRLARELARLQDVRAVSLPFDTAPADIAQFWHERYQRDEGHQWLR 315 Query: 294 DRLNESF 300 + + F Sbjct: 316 TLVYDLF 322 >UniRef50_Q1GMN1 Transcriptional regulator, LysR family n=1 Tax=Ruegeria sp. TM1040 RepID=Q1GMN1_SILST Length = 319 Score = 245 bits (625), Expect = 2e-63, Method: Composition-based stats. Identities = 66/301 (21%), Positives = 123/301 (40%), Gaps = 7/301 (2%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 +L DLNLL +F + S++KAA S+ ++ AVS +L+RLR +D LFIRS G+ Sbjct: 10 KNLNAIDLNLLKVFSALAAERSVTKAANSVGLSQPAVSHALRRLRDLMDDELFIRSTDGM 69 Query: 65 APTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSML-IRCL 120 PT L ++ +L+ L+ + + + + L+ + + L S L R Sbjct: 70 QPTERCRELAPAIDASLKMLQDAMTVKDDNDPANLRATYRLGMNDLFSTLLVPGLTARVA 129 Query: 121 RQDSSVEIECHD---ILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLIC 177 +Q +V + I + ++A L + DL + Q L + Sbjct: 130 KQAPNVSLRFLHSMAINQNVDDAYSDLERGRIDLTVIQDFDTPSRFDRELLGASEFVCVA 189 Query: 178 SNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINS 237 HP + EQ + + A I + + + R+I R +++ Sbjct: 190 RAGHPVFQPGLSMEQYTSLGHIMFTTLDAEYSRIDEALSKMGIRRRIELRVPHYSAALSA 249 Query: 238 IAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLN 297 A+TDL+ VP L L+ +L P K++ ++K+ + + ++ Sbjct: 250 TALTDLVYTVPRILAQHAEQAFGLQVSELPFEAPVRKIFQVWHKTRTKDFGHQWLRNVVS 309 Query: 298 E 298 + Sbjct: 310 D 310 >UniRef50_Q1R0T8 Transcriptional regulator, LysR family n=9 Tax=Gammaproteobacteria RepID=Q1R0T8_CHRSD Length = 308 Score = 245 bits (625), Expect = 2e-63, Method: Composition-based stats. Identities = 71/296 (23%), Positives = 140/296 (47%), Gaps = 5/296 (1%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 ++ DLNL+ F +Y+ S++ AA L +T +VS SL RLR F+DPLF R+ G+AP Sbjct: 1 MRPIDLNLVRTFVTLYESGSVTLAAHKLNVTQPSVSYSLSRLRELFDDPLFSRTRDGMAP 60 Query: 67 TTTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCLRQD 123 T + L+ + L +EQT++ + + ++ F + L + + ++R +R D Sbjct: 61 TFCAMRLYTSFRQALTQIEQTLSDAQHFDPEQSQRRFRLALTDLGETTLLAPILRHMR-D 119 Query: 124 SSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPR 183 + +E + + + ++ D VI + + S+ P+ R + RHPR Sbjct: 120 LAPGVELEVVPLEIDKVVSWFDNKSVDAVICSRDIQAPSLGRRPIIEERYVGLLGRRHPR 179 Query: 184 ITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDL 243 I + E E+ Q+ G ++ + ER + RK+S + + T L Sbjct: 180 IGQTLSMEAFSREDHVQVSPT-TGHGLVEDVLKERDITRKVSVVVPHFSALPRLLESTSL 238 Query: 244 LGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNES 299 L I+P ++ + +LK+++L +P +++ + +++ ++ F L E+ Sbjct: 239 LAILPEQIAGLFTQQADLKQVELPFDIPPVEVALYWSRQVDDSAAQEWFRRTLIEA 294 >UniRef50_A4YPA1 Putative transcriptional regulator, LysR family n=1 Tax=Bradyrhizobium sp. ORS278 RepID=A4YPA1_BRASO Length = 310 Score = 244 bits (623), Expect = 3e-63, Method: Composition-based stats. Identities = 65/301 (21%), Positives = 119/301 (39%), Gaps = 6/301 (1%) Query: 1 MANLY--DLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFI 58 MAN+ DL+ DLNLLV FE + Q S+S+ A+ L I + S +L+RLRA DPLF+ Sbjct: 1 MANIDRADLRDVDLNLLVAFEALMQTRSVSRMAQRLRIGQPSASHALKRLRALLGDPLFV 60 Query: 59 RSGKGIAPTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSM 115 R+ G+ PT L L + L +E+T+ + ++ F I + Sbjct: 61 RTPAGMIPTPHALALAEPIRAILTSIERTLFARASFDPRAERRVFRIGAMDYVQAVIADP 120 Query: 116 LIRCLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTL 175 L+ L+ + + + A L + DL I P I L+ R Sbjct: 121 LLAVLQAQAP-GCKLILTTTDCDTAGRSLARGEIDLAIGAFPQIKAGSHQELLYRERYEC 179 Query: 176 ICSNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTII 235 + + R+ T Q +A + + + R+++ + L I Sbjct: 180 VFDAKACRLGKRVTRAQWLALPHVIMSVHGDYSGPLDDVLKSSGEQREVAVSTPNFLAIP 239 Query: 236 NSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDR 295 + L+ +P + ++ L L L P+ + + ++ + + + D+ Sbjct: 240 FLLRNKRLIAALPSRMARAFCGRLGLSTCPLPFTAPTFDVTMIWHARTGDEPGAAWLRDQ 299 Query: 296 L 296 + Sbjct: 300 I 300 >UniRef50_A8H3B3 Transcriptional regulator, LysR family n=7 Tax=Gammaproteobacteria RepID=A8H3B3_SHEPA Length = 304 Score = 242 bits (619), Expect = 9e-63, Method: Composition-based stats. Identities = 82/303 (27%), Positives = 139/303 (45%), Gaps = 10/303 (3%) Query: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 M N D K+FD NLLVIF +YQ SI+ AA+SL +T VS +L+RL+A LF+R Sbjct: 1 MGNNMD-KRFDFNLLVIFLEVYQLRSITLAADSLGLTQPGVSAALKRLQATLGVELFVRE 59 Query: 61 GKGIAPTTTGLNLHHHLEKNLRGLEQTINIVNKSE--LKKNFIIYGPQLISCSNNSMLIR 118 G+GI+PT + L + + ++ V + ++F++Y + ++L Sbjct: 60 GRGISPTNAAIQLASQVSPAYNTVNSALSNVAGFDKQTPRSFLVY----VDEPMMNLLQP 115 Query: 119 CLRQDSSV---EIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTL 175 QDS + EI + E + L +KADL I + S S + T+ Sbjct: 116 LAEQDSDMGNCEIMFQLPPIEEERLLQQLSLQKADLAIDVGQLPSLSYSNQLFYRESVTM 175 Query: 176 ICSNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTII 235 IC HPRI Q E+ L + A + + +E RK+S SLL+++ Sbjct: 176 ICRKGHPRINGKIGKIQFYQEKHITLQIRRATLTALDFFTEEVIGERKVSCECHSLLSMM 235 Query: 236 NSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDR 295 ++ +D + I + + Y D L+ I+ + + ++K + N + ++ Sbjct: 236 ALVSESDCIAITSRSIADKYADKFGLQSIEPPFNTKPVLHNMMWHKRNEFNPAHTWLREK 295 Query: 296 LNE 298 LN+ Sbjct: 296 LNQ 298 >UniRef50_Q0ARX0 Transcriptional regulator, LysR family n=1 Tax=Maricaulis maris MCS10 RepID=Q0ARX0_MARMM Length = 334 Score = 242 bits (617), Expect = 1e-62, Method: Composition-based stats. Identities = 53/300 (17%), Positives = 117/300 (39%), Gaps = 4/300 (1%) Query: 2 ANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSG 61 +L LK DLNLL+ F+ ++ ++++AA L ++ VS +L RLR F D LF+R+ Sbjct: 1 MSLMSLKHVDLNLLITFDALWHERNVTRAARRLNVSQPTVSNALSRLRLAFGDQLFLRAP 60 Query: 62 KGIAPTTTGLNLHHHLEKNLRGLEQTIN---IVNKSELKKNFIIYGPQLISCSNNSMLIR 118 +GI PT + + + LR +EQ ++ + + ++ F I L+ Sbjct: 61 RGIEPTERCSEIIKDVREALRHIEQALDSGPAFDAKQCRREFHIGCADYFDLFVLPDLLA 120 Query: 119 CLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICS 178 + + + + I+ + E +LL + D ++ ++ P+ R+ Sbjct: 121 YMAEHAPM-IDLRLRSVDIEEGMDLLDAGELDFMMHMEFPAAKRFGVRPVLHERHVFATR 179 Query: 179 NRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSI 238 HP + + + + + + R+++ + T+ + + Sbjct: 180 AGHPLVREAPDIATFASLSHVNFSQRGDSESPVDEVLARLGYRRRVAITTQHMTTVAHLV 239 Query: 239 AVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 TDL+ VP + + + + + + +N+ + D + E Sbjct: 240 KTTDLVASVPSRMAARMVEEGGFAVYPIPFQIEKAPVAVYWNRRFELDGAMRWMRDAIIE 299 >UniRef50_Q12H69 Transcriptional regulator, LysR family n=14 Tax=Burkholderiales RepID=Q12H69_POLSJ Length = 342 Score = 242 bits (617), Expect = 2e-62, Method: Composition-based stats. Identities = 56/308 (18%), Positives = 116/308 (37%), Gaps = 15/308 (4%) Query: 3 NLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGK 62 N + + DLNLL +F+ + S+++AA +L +T AVS +L+RLR D L RSG+ Sbjct: 26 NPTNFRTLDLNLLRVFDEVMAERSLTRAARNLSLTQPAVSNALRRLRETLGDELVQRSGQ 85 Query: 63 GIAPTTTGLNLHHHLEKNLRGLEQTI--NIVNKSELKKNFIIYGPQLISCSNNSMLIRCL 120 G+APT + + + L+ L++++ + + F++ + LI L Sbjct: 86 GMAPTPRARAIWPAVREALQRLQESLIPDEFVPGQATTTFVLAMADATAAELIPGLIETL 145 Query: 121 RQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRS------------VICMPL 168 Q++ + I ++ + LL + DL + P + L Sbjct: 146 EQEAP-GVSMRVIPLTTRDPRRLLDEQACDLAVGYFPSVLADLTAHAQSGEPMPFQHRRL 204 Query: 169 HTIRNTLICSNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRG 228 + + HP + T ++ A + I + R++ Sbjct: 205 YDGEYVCVMRKGHPLASGPLTLDRFCAARHMLVSFSGRPYGFIDESLASLGRERQVVLTV 264 Query: 229 SSLLTIINSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLV 288 + T +A ++LL ++P L L + ++ + +++ S Sbjct: 265 NQFFTAGRVVANSNLLTVLPRHFVRVTGIAEQLVLRPLPFDVSAVHVDAVWHRRSQQRGA 324 Query: 289 FSRFIDRL 296 + + Sbjct: 325 HVWLREAV 332 >UniRef50_B5XYZ1 Transcriptional regulator, LysR family n=5 Tax=Klebsiella RepID=B5XYZ1_KLEP3 Length = 308 Score = 241 bits (615), Expect = 2e-62, Method: Composition-based stats. Identities = 61/291 (20%), Positives = 115/291 (39%), Gaps = 4/291 (1%) Query: 9 KFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTT 68 + D L F +Y+ ++S AA++L I+ S L++LR F DPLF+R G+ + PT Sbjct: 4 ELDFKSLRFFSALYRLGNVSPAADALNISQPTGSLLLKKLRDHFADPLFVRVGQRMMPTP 63 Query: 69 TGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSS 125 + + L+ + + + + ++NF I + + +L L+Q ++ Sbjct: 64 RADAIAPTVFTLLQLADNDLAVKPEFLPQQSQRNFTIGMTDISQMTLLPLLQIALQQQAA 123 Query: 126 VEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRIT 185 I + E L K DL I + + SV L + + HPRI Sbjct: 124 DGITFTIQNLD-EQTLNALESGKCDLAIGYLTQLPDSVYQQHLFDQSYVCLAAENHPRIR 182 Query: 186 DNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLG 245 E E+ + + D+ +DE M R+I+ S L +A +D++ Sbjct: 183 TQLRAEDWRQEKHLAIRVEGTAHGDMDKRLDEHSMPRRIALTLPSFLGTGELVAESDMIA 242 Query: 246 IVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRL 296 +VP ++ + L PL I + +++ + + Sbjct: 243 VVPEQVARHITRRYPCRSWPLPFPLARIAIRQVWHQRLHRDPGHIWLRSLI 293 >UniRef50_A6VUW1 Transcriptional regulator, LysR family n=2 Tax=Marinomonas RepID=A6VUW1_MARMS Length = 321 Score = 241 bits (615), Expect = 2e-62, Method: Composition-based stats. Identities = 69/298 (23%), Positives = 123/298 (41%), Gaps = 6/298 (2%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 L DLNLL +F+ + + L+++KAA L ++ AVS+SL RLR FNDPLFIR+ G++ Sbjct: 21 LSDIDLNLLYVFQVLIEELNVTKAATRLNVSQPAVSRSLSRLRDVFNDPLFIRTSHGLSA 80 Query: 67 TTTGLNLHHHLEKNLRGLEQTI--NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDS 124 T +L L L+GLE I + K+ FI+ + + ++ RQ + Sbjct: 81 TAKTQDLAPLLADTLKGLESLIQPSEFTPQSSKRRFILSTTDFGTLTVLPKILDKFRQKA 140 Query: 125 SVEIECHDILMSAENAEELLVHRKADLVITQMP-VISRSVICMPLHTIRNTLICSNRHPR 183 I D+ E+ L D+ + + + M L + R + HPR Sbjct: 141 PDAI--LDVKSWNEDMVAELDQTNIDVAVAVLSKEPPAGIRAMRLKSDRMVCLARKNHPR 198 Query: 184 ITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDL 243 I T E + Q++ + E+++ R +S + + + +DL Sbjct: 199 IEGKLTLESYLQVSHVQVVLGRREYFAVDRELEKMGHKRHVSVHLPNFVPAARVVMDSDL 258 Query: 244 LGIVPYELYNSYRDFL-NLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 L VP + + +L + +++ ++ F L ++F Sbjct: 259 LLTVPKLFAEDMAATVSEIVVHELPFASREFDYSMIWHERFQHDAAHVWFRGLLRQAF 316 >UniRef50_Q0VLU8 Transcriptional regulator, LysR family n=2 Tax=Alcanivorax RepID=Q0VLU8_ALCBS Length = 310 Score = 241 bits (615), Expect = 3e-62, Method: Composition-based stats. Identities = 63/295 (21%), Positives = 122/295 (41%), Gaps = 6/295 (2%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 + +FDLNL V+F+ IY S+++AA+ L +T AVS +L RLRA+ NDPLF+R G + Sbjct: 1 MHVSRFDLNLFVVFDAIYTEGSLTRAAKVLNLTQPAVSHALARLRARLNDPLFVRQGSRM 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 PT + + L G ++ ++ + SE ++ F++ + L+ Sbjct: 61 VPTARARAMVSPVRHALGGFQRCLSEEGGFDASEAERTFVLGLRDGLEARLLPALMSQFM 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 ++ I+ + +S L + DL M + ++ + ++ H Sbjct: 121 DEAP-GIKLQSLTVSRRQMATELASGRLDLACDVMLALPEAIEHQVVLEGPLVVLMRESH 179 Query: 182 PRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVT 241 P +A + + S+ G + + R I R ++++ T Sbjct: 180 PLAQG-MDLPDYLAAQHVLVSSRREGPGLEDFGLARQGYRRHIRLRCQHYQAALSTVQQT 238 Query: 242 DLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRL 296 DLL +P L D L LP +++++ +++ + S R+ Sbjct: 239 DLLLTMPASLAGQLSDQ-GLVWKPFPGGLPGLEMHLYWHRDQSADPAHSWLRQRV 292 >UniRef50_Q8YZV2 Transcriptional regulator n=2 Tax=Nostocaceae RepID=Q8YZV2_ANASP Length = 305 Score = 240 bits (614), Expect = 3e-62, Method: Composition-based stats. Identities = 70/300 (23%), Positives = 122/300 (40%), Gaps = 5/300 (1%) Query: 2 ANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSG 61 L DL DLNLLV FE +++ S++ AA+ LY+ A+S +L RLR F D LFIR G Sbjct: 1 MGLIDLSSIDLNLLVTFEVLFEERSVTAAAQRLYLGQPAMSAALARLRILFQDELFIRIG 60 Query: 62 KGIAPTTTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIR 118 + + PT L + + L+ + QT+ + + K F I S L+ Sbjct: 61 REMQPTAKALEISPGISVALQQIRQTLESSQTFDPTTSKHTFAIGSSDYTSYVVLPKLLE 120 Query: 119 CLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICS 178 RQ + I+ I ++ +LL R+ + + R MPL +C Sbjct: 121 VCRQVAP-SIDFRLIGFEKDSVGDLLEQREIHVALGLFQNPPRQTRQMPLFEEHFVGLCR 179 Query: 179 NRHPRITDN-STYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINS 237 HP +T T E + + +I + + + R++ LL + Sbjct: 180 RGHPVVTQESMTPETFARLPQALFTLRRDDIGEIDKVLAQYNLQRRVVLTTPHLLILPTV 239 Query: 238 IAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLN 297 I+ +DL+ ++P L + L+ +L + + ++K + + L Sbjct: 240 ISSSDLVTVIPSRLLTPFAYKDTLEIFELPVKTEPWMISMLWSKLTDQDQASIWLRQMLK 299 >UniRef50_B2JSH4 Transcriptional regulator, LysR family n=2 Tax=Burkholderiaceae RepID=B2JSH4_BURP8 Length = 309 Score = 240 bits (613), Expect = 4e-62, Method: Composition-based stats. Identities = 60/303 (19%), Positives = 123/303 (40%), Gaps = 3/303 (0%) Query: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 + ++ + FDLNLL IF+ +++H + KAAE L ++ A S +L+RLR + D LF+++ Sbjct: 2 LPSICHMDNFDLNLLRIFDALWRHGHLGKAAEELTLSQPAASYALKRLREELGDVLFVKT 61 Query: 61 GKGIAPTTTGLNLHHHLEKNLRGLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCL 120 G G+ PT + L ++ L + + + K + L L R L Sbjct: 62 GSGMQPTPRAILLAPVVQSVLADIRERVLKAPNFVPDKAQRTFTIALSDVGEMVSLPRLL 121 Query: 121 RQDSS--VEIECHDILMSAENAEELLVHRKADLVITQMPVISR-SVICMPLHTIRNTLIC 177 ++ +S + + + + L + DL I P + V L + Sbjct: 122 QRVTSLAPSVNVTTVSFAPKQLLSSLQRSEVDLAIGYFPDLDGVDVFQQHLVRHSFVCLV 181 Query: 178 SNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINS 237 HP + T + + + + ++ + E + R+ L+I + Sbjct: 182 RQNHPAVQGRLTKKLFCELPHAVVQVEGRRQEIVEQFLKENGIRRREVLHTPHFLSIPMT 241 Query: 238 IAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLN 297 IA+TDL+ V ++ + L+ + + +P + +++S ++ + Sbjct: 242 IAMTDLVVTVSSDVGEIFARIAELEILDPPYKMPRFDVNQYWHRSQHDDPGNRWMRGLVR 301 Query: 298 ESF 300 E F Sbjct: 302 ELF 304 >UniRef50_A6EW06 Transcriptional regulator n=2 Tax=Marinobacter RepID=A6EW06_9ALTE Length = 315 Score = 240 bits (613), Expect = 4e-62, Method: Composition-based stats. Identities = 59/293 (20%), Positives = 120/293 (40%), Gaps = 3/293 (1%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 +K +L LL IF+ I S+++AA+ L +T AVS ++ R+R +NDPLF+R G+ I P Sbjct: 1 MKTQELQLLYIFDAIMTERSVTRAADRLAMTQPAVSNAISRMRQIWNDPLFVRKGRNIEP 60 Query: 67 TTTGLNLHHHLEKNLRGLEQTINI--VNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDS 124 T+ L+L + + L ++ + + ++ F I +I LI L +++ Sbjct: 61 TSYALSLWDQVGDPMFALTNAVSATQFDPASARRTFRIAVTDVIVEMIWRQLIDLLEREA 120 Query: 125 SVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRI 184 ++ H + + E + + L DL I + S+ L L HP Sbjct: 121 P-GVDVHAVPYTPEGSYDDLRSAHVDLAIGVLNQHDYSLRSTWLLDSGFVLAMRADHPLA 179 Query: 185 TDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLL 244 T E+ + + + +D++ +R+I+ + ++ + ++L+ Sbjct: 180 GRQITMEEFLEARHLLVTMSGDAHGSVDSYLDQKGQSRRIAATMNHFASVPQVLRESNLI 239 Query: 245 GIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLN 297 VP + L +L + LY+ ++ + + Sbjct: 240 AAVPELISQDCGFVDGLWMGELPFDVDPTSLYLIWHARHDREPGIIWIRNHIE 292 >UniRef50_A8V9B9 LysR-like regulatory protein n=2 Tax=Betaproteobacteria RepID=A8V9B9_9BURK Length = 308 Score = 240 bits (613), Expect = 4e-62, Method: Composition-based stats. Identities = 59/298 (19%), Positives = 124/298 (41%), Gaps = 7/298 (2%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 + + D+ LL +F Y+ S+++AAE+L ++ +S +L +LR + DPLF+R+ +G+ Sbjct: 1 MIEIDVKLLNVFAETYRTSSVTQAAENLGLSQPTISFNLSKLRDHYKDPLFVRTSRGMEA 60 Query: 67 TTTGLNLHHHLEKNLRG---LEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQ- 122 T L+ + L + + + SE ++ F I + L+ LR Sbjct: 61 TPFAQELYEQVVDLLASFSNIARLQTSFDPSEAQRIFRIAMTDISQIVLLPTLLNKLRIV 120 Query: 123 DSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHP 182 ++ I +L + +L + MP + L R ++ ++RH Sbjct: 121 APRAQLRISHITTETP---RMLESGEVELAVGFMPQLDAGFYQQKLFPQRFVVLAASRHV 177 Query: 183 RITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTD 242 + D+ + E ++ + G I + E+ ++R + + L I + +A TD Sbjct: 178 ALGDSMSLEYYLSAGHVTVTPSGTGHSIIDRTLREQQLHRHVVLDVPNYLAIADIVAQTD 237 Query: 243 LLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 LL VP +L + ++ + + +P + ++ + + L E F Sbjct: 238 LLATVPQKLADLMSSSVDARRYPVPFEIPQYDVKQHWHARTHQDAGHRWLRALLAELF 295 >UniRef50_A9GLW1 Transcriptional regulator, LysR family n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GLW1_SORC5 Length = 315 Score = 240 bits (612), Expect = 5e-62, Method: Composition-based stats. Identities = 50/278 (17%), Positives = 110/278 (39%), Gaps = 5/278 (1%) Query: 24 HLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTTGLNLHHHLEKNLRG 83 S+++AA + ++ SA+S +L RLR +DP+ +R+ +G+ PT L + + L Sbjct: 35 EGSVTRAAARVGLSQSAMSHALGRLRVLIDDPVLVRTPRGMIPTPRAQELIGPIREALAK 94 Query: 84 LEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSVEIECHDILMSAENA 140 +E T+ + +++F + + L++ L ++ I+ +E Sbjct: 95 IEATVARSPRFEPATARRSFTVATVDYVELILLPRLVQKLVSEAPF-IDLVARPYDSE-M 152 Query: 141 EELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRITDNSTYEQIMAEEFTQ 200 + K DL I +P + L R + HP + T + + Sbjct: 153 WSAMETGKVDLAIGLLPALPAGFYRQRLIEERYMCVVRRSHPAVRGKLTLKTYTSLPHAL 212 Query: 201 LISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLGIVPYELYNSYRDFLN 260 + + G + + ER ++R+++ + L + +A TDL+ VP + + + Sbjct: 213 ISPRGEGGGRVDEVLAERGLSRRVALQIPHFLVAAHIVAQTDLVLTVPARIARVFAEMEE 272 Query: 261 LKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 L +K L + +++ + + E Sbjct: 273 LHVMKPPVELGGFSVDQVWHERHAKDPAHTWLRGVFAE 310 >UniRef50_B7RYN1 Transcriptional regulator, LysR family protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RYN1_9GAMM Length = 303 Score = 240 bits (612), Expect = 5e-62, Method: Composition-based stats. Identities = 58/299 (19%), Positives = 122/299 (40%), Gaps = 4/299 (1%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 +L+ DLNLL +F+ + S+++AAE + ++ A+S +L R R D LF R+G+G+ Sbjct: 1 MNLRSVDLNLLTVFDAVITEGSVTRAAEKIGMSQPAMSIALTRFRHIAKDELFERTGRGL 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQ-- 122 PT L L + + L + + ++ ++ + L ML +R+ Sbjct: 61 RPTPRALELAAPIRRALDIVTDALEHGTDFDMSRSDRSFSVVLSGIGEIVMLPTLMRRLE 120 Query: 123 DSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHP 182 + I + ++ + + + DL + +P+ S +IC + + HP Sbjct: 121 STGSRININTRHVAHGDMLKEMHFGNVDLYMWIVPIESSEIICTQIGNTSEVCLVRADHP 180 Query: 183 RITDNSTYEQIMAEEFTQLISKSA-GVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVT 241 + D+ + + A G I E+ + R+ S S ++ T Sbjct: 181 YVGDSLSVNEFAALRHVTFHMPGTYGPSIIDRELWRLGLKREHSMSVHSYFDAPRVLSQT 240 Query: 242 DLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 D++ +P L + LK ++ L +++ + K++ + + L + F Sbjct: 241 DMVCTMPRVLGRHFARVHGLKMVRSPLQL-EFPVFMLWPKAAEKDKGHQWLRETLIDIF 298 >UniRef50_A9R140 Substrate-binding transcriptional regulator, LysR family n=34 Tax=Enterobacteriaceae RepID=A9R140_YERPG Length = 322 Score = 239 bits (611), Expect = 8e-62, Method: Composition-based stats. Identities = 68/295 (23%), Positives = 136/295 (46%), Gaps = 4/295 (1%) Query: 6 DLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIA 65 L+ DLNLL +F+ + Q ++++AA+SL ++ AVS ++ RL+ FND LF+R G+GI Sbjct: 25 HLRSVDLNLLTVFDAVMQMQNVTRAAQSLGMSQPAVSNAVARLKVMFNDELFVRYGRGIQ 84 Query: 66 PTTTGLNLHHHLEKNLRGLEQTI--NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQD 123 PT L + + L+ ++ + ++ F + + + +++ ++Q Sbjct: 85 PTARARQLFGPVRQALQLVQNELPGAGFEAKNSERLFNLSICSPLDVRLAAQIVQRVKQS 144 Query: 124 SSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPR 183 + ++ +N E L +++ + VI +PL L S HPR Sbjct: 145 AP-NVQLVIKSYLNDNIEHQLRYQETEFVIGYTEFDRPDFHRIPLFKDELVLAVSKDHPR 203 Query: 184 ITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDL 243 I D+ T Q+++E + G + D + I++ + + +++N ++ T Sbjct: 204 INDSITENQLLSESHAVVSLDKKG-SFSEPYYDSTTSTQSIAYESTDMNSVLNIVSQTYF 262 Query: 244 LGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 + I P L +Y + LNLK I L S Y+++++S+ + L + Sbjct: 263 VAIAPRWLVKTYSEALNLKLISLPWENTSRACYLTWHESTDRDKGHQWMKALLGQ 317 >UniRef50_Q7MEK1 Transcriptional regulator n=15 Tax=Vibrionaceae RepID=Q7MEK1_VIBVY Length = 307 Score = 239 bits (609), Expect = 1e-61, Method: Composition-based stats. Identities = 77/302 (25%), Positives = 143/302 (47%), Gaps = 4/302 (1%) Query: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 M + + +K DLNL+ IF I++ ++SKAA L I+ AVS++L RLR +++PLF RS Sbjct: 1 MCSRFAMKNTDLNLIPIFVAIFEEQNLSKAAARLDISQPAVSKALARLRDIYDEPLFHRS 60 Query: 61 GKGIAPTTTGLNLHHHLEKNLRGLEQTINIVNKSELK---KNFIIYGPQLISCSNNSMLI 117 G+ PT+ ++++ + + T++ ++ E K + F I + S L+ Sbjct: 61 PSGVEPTSFAVDIYPAMLTAFKNFTSTLSASSEFEAKVSNRIFSIACVSVASYELMPQLL 120 Query: 118 RCLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLIC 177 + +RQ + I + E+ E L ++ DL+I P ++ P+ + R ++C Sbjct: 121 KQIRQHAP-NISLEVHPLFTEDYESDLRLQRYDLIIDMAPRGWTTLKVEPIFSERLMVVC 179 Query: 178 SNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINS 237 HPRI D + Q +AEE + A + E RKI++R S L ++ Sbjct: 180 CADHPRIADACSVAQFLAEEHVVVSRWHARKSLMSAEDIADLAKRKIAYRASGALEMLPV 239 Query: 238 IAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLN 297 I ++ +G++P N++ N+K + L L ++ S + ++L Sbjct: 240 IHGSEYIGMLPESTINAFAGTYNIKAVSLPFDHDVYDLCAIWHPSRSSESAHQWLRNQLK 299 Query: 298 ES 299 + Sbjct: 300 AA 301 >UniRef50_B0TPA4 Transcriptional regulator, LysR family n=2 Tax=Shewanella RepID=B0TPA4_SHEHH Length = 301 Score = 239 bits (609), Expect = 1e-61, Method: Composition-based stats. Identities = 72/292 (24%), Positives = 132/292 (45%), Gaps = 4/292 (1%) Query: 8 KKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPT 67 K+FD+NLL +F + + S + AAE L +T +VS ++ R +A + LF+R+G+ I PT Sbjct: 5 KQFDVNLLRVFLAVCRTGSYTLAAEELDLTQPSVSNAINRFKAVVGEELFVRAGRNIKPT 64 Query: 68 TTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDS 124 L L + +EQTIN + + ++ F++ +I+ L L +D Sbjct: 65 AMANYLFEQLNDSFCNIEQTINGLEGFDPNTSERQFVVLANDVIAHMLQRRLDE-LVKDL 123 Query: 125 SVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRI 184 +EI + ELL +ADLVI L + S HPRI Sbjct: 124 PIEIIFREPPDFDSEILELLTLEQADLVIDIGLPEDNRFERKLLIQEAAVCVASKEHPRI 183 Query: 185 TDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLL 244 ++ ++EQ AE + + + + +E NRK+ SS+L++ ++++ +D + Sbjct: 184 QESISWEQFFAERHVFVKLRRFNRTAVDILSEEVLPNRKVYSSKSSMLSLFSAVSTSDAI 243 Query: 245 GIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRL 296 G+ P N + NL+ + L + + + + K N +++ Sbjct: 244 GVAPRNYSNDFEKVFNLQLLPLPFNTKPLDIELVWKKKHNRNPAHIWLREQI 295 >UniRef50_Q1N663 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Bermanella marisrubri RepID=Q1N663_9GAMM Length = 306 Score = 238 bits (608), Expect = 2e-61, Method: Composition-based stats. Identities = 62/296 (20%), Positives = 127/296 (42%), Gaps = 5/296 (1%) Query: 9 KFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTT 68 K DLNL +FE IY S+++AAE L +T A+S +L RLR + +DPLF+R G + PT Sbjct: 2 KIDLNLFTVFEAIYLEGSLTRAAERLNLTQPAISHALSRLRERLDDPLFVRQGHKMRPTP 61 Query: 69 TGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSS 125 L ++ LR L + N +E +K + + ++ + +++ L + + Sbjct: 62 LAQKLIPDIQAALRQLNGALQQSHHFNPAEAEKTYRVAMRDVMEATLLPPVLKGL-DNIA 120 Query: 126 VEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRIT 185 I+ + + + E L + D V+ + S + L +I + ++ Sbjct: 121 PNIQLASVHIERRDMESKLASGELDFVVDVLLPTSEQIYKKKLLNDELVVIYNPALSQLP 180 Query: 186 DNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLG 245 + T E+ + + + ++++G + + +NR ++ R + +L Sbjct: 181 EGFTEEEYLRAKHILVSTRASGPSLVDYALSAEGLNRNVALRCQHYYAACQVASDNGMLL 240 Query: 246 IVPYELYNSYRDFLN-LKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 +P + L+ L SI +Y+ +++S + + F D L + Sbjct: 241 TMPSRYASILLQHFPTLQRSSLPFKTSSIDVYLYWHESLNEDGANAWFRDMLQQVL 296 >UniRef50_A8H6N4 Transcriptional regulator, LysR family n=3 Tax=Shewanella RepID=A8H6N4_SHEPA Length = 305 Score = 238 bits (608), Expect = 2e-61, Method: Composition-based stats. Identities = 70/295 (23%), Positives = 129/295 (43%), Gaps = 4/295 (1%) Query: 8 KKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPT 67 K FDLNL IF +Y+ S S+AAE L +T S+VS ++ RL+ + LFIR G+G+ PT Sbjct: 5 KSFDLNLFRIFTAVYRTSSFSRAAEELDLTQSSVSNAITRLKLAVGEELFIRVGRGVKPT 64 Query: 68 TTGLNLHHHLEKNLRGLEQ---TINIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDS 124 + +NL+ L + +EQ + + + ++ F +Y + + ++ ++ Sbjct: 65 ASAMNLYQQLASPVSEIEQVASSFELFDAKRSERTFYVYASE-SAILLLQGIVEQFLEEL 123 Query: 125 SVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRI 184 S+ + + + E + L K DL + S S + + + HPRI Sbjct: 124 SINLVFREPPLIEEELQMDLQLEKVDLALDIWLPESSSFKSQKVMQDKLVCVARKGHPRI 183 Query: 185 TDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLL 244 + T EQ E+ + + + + RK+ SS+L+++ + +D L Sbjct: 184 SGAITQEQYFNEKHIIFKMRRDNLSVADLLTKQVLPARKMHSEQSSILSMMALASKSDAL 243 Query: 245 GIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNES 299 IV + Y L+ +L I+ Y+ ++ N D LN++ Sbjct: 244 AIVSKSYTDEYAQLFGLQVFELPFAAEPIEYYMVWSHKLQQNRANIWLRDLLNQA 298 >UniRef50_Q0SCY7 Transcriptional regulator, LysR family protein n=3 Tax=Actinomycetales RepID=Q0SCY7_RHOSR Length = 331 Score = 238 bits (608), Expect = 2e-61, Method: Composition-based stats. Identities = 71/300 (23%), Positives = 132/300 (44%), Gaps = 5/300 (1%) Query: 4 LYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKG 63 + + DLNL+ F +Y+ S+++ AE L+IT +VS SL+RLR QFND LFIRS G Sbjct: 25 IIGMADVDLNLIRTFVLLYETRSVTRTAELLFITQPSVSHSLRRLRRQFNDDLFIRSSDG 84 Query: 64 IAPTTTGLNLHHHLEKNLRGLEQTINIVNKSELK---KNFIIYGPQLISCSNNSMLIRCL 120 +APT +++ L + L +++T++ V + + + F I L S ++ L Sbjct: 85 LAPTVLAASMYPQLHQALEVIDETVSGVGHFDAETSDRTFRICATDLGEISLLPGVLAAL 144 Query: 121 RQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNR 180 + + +A E L +AD VI + + + PL +C+ Sbjct: 145 ETRAP-GCAVQVTPLDFASAAEELRQGRADAVICTPRIDAPDLRRDPLFREGYVGLCALG 203 Query: 181 HPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAV 240 HPRI + +AE ++ +AG D + R I+ R + +A Sbjct: 204 HPRIGVEPGLDDFLAERHI-VVDAAAGHVDADQALARMGRRRDIAVRVPHFAVLPELVAQ 262 Query: 241 TDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 T L +VP + + ++ L +P++++ + + +L + + + + Sbjct: 263 TRHLAVVPSRVAELFTRSSPVRTFALPVEIPNVEVSLFTVRRALPSPGVDWLRELIADVL 322 >UniRef50_B5JUQ0 Transcriptional regulator, LysR family, putative n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JUQ0_9GAMM Length = 300 Score = 238 bits (607), Expect = 2e-61, Method: Composition-based stats. Identities = 64/294 (21%), Positives = 130/294 (44%), Gaps = 4/294 (1%) Query: 6 DLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIA 65 +L+ DLNL +FE I + S++ AA L ++ A S +L+RLR D LF+R+ +G+ Sbjct: 4 NLRSVDLNLFPVFEAIMEQGSLNMAACHLGMSQPAASAALKRLRLTIKDELFVRTRRGLE 63 Query: 66 PTTTGLNLHHHLEKNLRGLEQTINIVNKSEL---KKNFIIYGPQLISCSNNSMLIRCLRQ 122 PT L L+ + L L + N+ + ++ F + G L+ LR+ Sbjct: 64 PTARALELYPVVHHLLESLRGEMERANQFDPLFCERIFKVAGGDYFDMVFMGRLMNMLRE 123 Query: 123 DSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHP 182 + +++ ++ + + L+ K DL + I+ + + L +++ + HP Sbjct: 124 SAP-KVQVESVIHGFQESLNLIQRGKLDLCLHYDKEIAHELPTLKLFEESMSVLMAADHP 182 Query: 183 RITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTD 242 + +A E L S + + + + NR + R SS+ +++ +I + Sbjct: 183 YADKQLSLSDYIALEHVVLPKLSGNANQLDVILGGFNENRCVRARVSSVSSMVMAIKQSY 242 Query: 243 LLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRL 296 L+G +P + + + +L P I +Y+S+ S + V F + + Sbjct: 243 LIGTIPTRMASILCEGYDLVFKPFPKEAPPIPIYLSWAPFSDKDSVHRWFRNMI 296 >UniRef50_Q081Z6 Transcriptional regulator, LysR family n=1 Tax=Shewanella frigidimarina NCIMB 400 RepID=Q081Z6_SHEFN Length = 303 Score = 237 bits (605), Expect = 3e-61, Method: Composition-based stats. Identities = 66/290 (22%), Positives = 120/290 (41%), Gaps = 3/290 (1%) Query: 9 KFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTT 68 K DLNL V+F+ IY +I+KAA L ++ AVS SL +LR F+D LFIR G + PT Sbjct: 2 KIDLNLFVVFDAIYCEGNITKAASVLNLSQPAVSHSLGKLRTHFDDALFIRQGNEMRPTP 61 Query: 69 TGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSS 125 N+ + + L L+ + +K+F + + +L + L +S Sbjct: 62 VAKNVIDDVREALHQLQVCLVQSRQFEPLTSRKSFSLSLHGSLEPYYLPILQQSLSLESP 121 Query: 126 VEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRIT 185 + + E L DL I + +S +++ L + ++ HP + Sbjct: 122 SINLSSNKRVRRTELENKLASGDIDLAIDTLIPVSNNIMHTQLELDQLVVVARKNHPAMN 181 Query: 186 DNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLG 245 + + + + S+S G E+ ++RKIS R L+ I D+L Sbjct: 182 PDLDLATYLKLDHVLVSSRSTGPSLEDFELSRIGLHRKISLRCQHALSACRVILNNDMLL 241 Query: 246 IVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDR 295 +P Y L++ + LP I +++ ++ + ++ Sbjct: 242 TLPKTAAAMYSKMLDIDIHPMPVELPDIGVHLYWHVNVDKEPANKWLRNK 291 >UniRef50_B7VH72 Transcriptional regulator n=4 Tax=Vibrionales RepID=B7VH72_VIBSL Length = 311 Score = 237 bits (604), Expect = 5e-61, Method: Composition-based stats. Identities = 68/292 (23%), Positives = 130/292 (44%), Gaps = 5/292 (1%) Query: 11 DLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTTG 70 + NLL +F + + S+SKAA+ L S +S +L RL+ + LF+R G+G+ PT+ Sbjct: 7 NFNLLAVFSAVMEQGSLSKAADQLSTNQSTISTALARLKKEIGQELFVRKGRGVTPTSYA 66 Query: 71 LNLHHHLEKNLRGLE---QTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSVE 127 +L+ ++ + L Q++ ++ ++ F+I P+ + + Q ++ Sbjct: 67 QSLYEQIKTPIHELNDVFQSMANFDEQSSERKFVISSPEHLQWILLNSFAALPNQ--NLS 124 Query: 128 IECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRITDN 187 +E D S E E L+ ++ D +I + S++ L+ ++C HPRI Sbjct: 125 LEVFDQPDSDERIYEDLLTQEFDAMIDIVVPEHPSIVSETLYEGEFVIVCREDHPRIQGE 184 Query: 188 STYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLGIV 247 + Q M E+ L V + RKI F G SL + I + +D + +V Sbjct: 185 ISEAQFMNEKHAVLDRTRRKVRSLNHYTSLDLSKRKIVFHGRSLFSNILLCSQSDYITVV 244 Query: 248 PYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNES 299 P + +++ L L+ K I Y+ + K N+ F +++ + Sbjct: 245 PLSMAVQFQERLGLQLFKPPFEYQPISHYLIWLKKQNNDPAHKWFREQVIST 296 >UniRef50_A9CLK9 Transcriptional regulator, LysR family n=2 Tax=Alphaproteobacteria RepID=A9CLK9_AGRT5 Length = 325 Score = 236 bits (603), Expect = 5e-61, Method: Composition-based stats. Identities = 59/300 (19%), Positives = 120/300 (40%), Gaps = 5/300 (1%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 +L DLNLLV F+ + ++++A + T A+S +L RLR D LF+R G+ Sbjct: 8 MNLHGIDLNLLVAFDALNSERNVTRAGSRIGRTQPAMSAALSRLRFLLRDELFVRGPNGL 67 Query: 65 APTTTGLNLHHHLEKNLRGLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCL---- 120 PT + L + LR +++T+ + K+ I + + + + + +L R L Sbjct: 68 QPTPRAVELAEPISLALREIQRTLQFTQGFDPDKSTISFSIAVSAHAGSVILPRLLSLLE 127 Query: 121 RQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNR 180 + ++I+ D S ++A LL DL + P + ++ L R I Sbjct: 128 EKAPGIDIKVRDYS-SRDDAVSLLDSGGVDLTVGIPPTPTSRILSARLFQERFVCILRKD 186 Query: 181 HPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAV 240 HP + E ++ + + G+D + + R+ + + +A Sbjct: 187 HPILGRPFDPETFLSLTHILVAPDNEGLDVADAALASKNFRRRAAVTIPHMHVAPALVAS 246 Query: 241 TDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 +D++ V + L PL + +S+++ + + + L +F Sbjct: 247 SDMVATVIESVVAHSGFAERLAVFDFPLPLNPVPFVLSWHRRNDGHPAQQWLRNGLLAAF 306 >UniRef50_A8GG55 Transcriptional regulator, LysR family n=1 Tax=Serratia proteamaculans 568 RepID=A8GG55_SERP5 Length = 310 Score = 236 bits (603), Expect = 6e-61, Method: Composition-based stats. Identities = 63/303 (20%), Positives = 126/303 (41%), Gaps = 10/303 (3%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 +L DLNLLV+FE +YQ +++ A + L +VS +L RLR F+DPLF+RSG G+ Sbjct: 1 MNLSNVDLNLLVVFEALYQTRNVTVAGQRLNRAQPSVSNALARLRTLFDDPLFVRSGGGM 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTINIVNKSEL----KKNFIIYGPQLISCSNNSMLIRCL 120 PT L ++ L + Q + + + ++ F + + +I L Sbjct: 61 LPTARAHQLMLQIQPVLEQIHQALTPPTRFDPATASQRRFRLAAGDYADITLLPTIISRL 120 Query: 121 RQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNR 180 RQ + I+ + + L + D+ + + ++ PL T I S Sbjct: 121 RQAAP-GIDIRVSRLDRRTVVQQLERGEIDVALGGHLEVPEGMLVQPLFNESFTCIASRH 179 Query: 181 HPRI-TDNSTYEQIMAEEFTQLISK--SAGVDDIQMEIDERFMNRKISFRGSSLLTIINS 237 HP+I ++ +Q + + I + E + R+++ S ++ + Sbjct: 180 HPQIAAESWNLQQYIGLPHALYAPSDDGSARGIIDQRLTEMGLERRVAATFSHIIALPAV 239 Query: 238 IAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPL--PSIKLYISYNKSSLNNLVFSRFIDR 295 +A +DL+ + + + D ++ + L L P+ + + + + D Sbjct: 240 VAGSDLIATLATSVARQFADPSRIQFLPLPSELAMPAFPIECVAGRQVKRDPALAWLCDT 299 Query: 296 LNE 298 L++ Sbjct: 300 LSQ 302 >UniRef50_A6CXP0 Transcriptional regulator, LysR family protein n=2 Tax=Vibrionaceae RepID=A6CXP0_9VIBR Length = 310 Score = 236 bits (603), Expect = 6e-61, Method: Composition-based stats. Identities = 73/297 (24%), Positives = 126/297 (42%), Gaps = 5/297 (1%) Query: 8 KKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPT 67 KKFDLNLL +F Y+ S++K+AE L +T SAVS +L RL+ LF R+G+GI PT Sbjct: 12 KKFDLNLLRVFISTYETESVTKSAERLDLTQSAVSNALTRLKENVGKELFSRTGRGIKPT 71 Query: 68 TTGLNLHHHLEKNLRGLE---QTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDS 124 L+ ++ +E Q + + + ++ F++Y + L Sbjct: 72 RYAKELYEQTHDHIMSIEKVIQGLEAFDPKKTQRTFVVYCHEAAMLRLQKRL-HVCTTYP 130 Query: 125 SVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRI 184 ++EI ++ E L K DLVI P S+ LH+ T + S HPRI Sbjct: 131 NIEIILKELPPKDARIYEDLQMEKVDLVIDVSPSDSKVFQSELLHSEGLTCVASKNHPRI 190 Query: 185 -TDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDL 243 M E L + + ++ + E RK+ + SSLL ++ S++ + Sbjct: 191 QQGKFDKSNYMTESHVLLNIRRHNLTFVEWLVSEVLPPRKVFSQHSSLLGMLPSVSNSQA 250 Query: 244 LGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 + ++P + Y D L+ + Y+ + +N + ++ Sbjct: 251 IAVIPLSVAEQYSDIFQLQTFPFPFETKTFDSYMVWPSKMSHNSAITWLRQQMVHHL 307 >UniRef50_Q13YH7 Transcriptional regulator, LysR family n=12 Tax=cellular organisms RepID=Q13YH7_BURXL Length = 317 Score = 236 bits (603), Expect = 6e-61, Method: Composition-based stats. Identities = 61/300 (20%), Positives = 120/300 (40%), Gaps = 7/300 (2%) Query: 4 LYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKG 63 + L + DLNLL +F+ I + S+++A E L ++ A+S SL RLR F+DPLFIR+ G Sbjct: 12 MNSLDQVDLNLLRVFQAIVEERSLTRAGERLALSQPAISYSLGRLRTLFDDPLFIRTRAG 71 Query: 64 IAPTTTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCL 120 + PT L L + + L + + + + + + F + + + L Sbjct: 72 MQPTPIALELSAIVARALDTVREALRYAEHFDPAVSTRTFRVSLSDAGELAYLPPICEAL 131 Query: 121 RQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNR 180 Q + + + E E+ L + D I +P ++ L + R Sbjct: 132 HQQAP-RVRLRIEPLPVEEIEDALRASRLDFAIGNLPTLTARTRHQALFEETYVCMTRKR 190 Query: 181 H--PRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSI 238 PR + + + Q+ S + E + + R I+ + + + + Sbjct: 191 RGLPRAK-ELSLKAFLDASHVQITSVEHSHRALDDEFRTQGVGRHIALELPHFVALPSVL 249 Query: 239 AVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 AVTDL +P L + N + +L LP + + +++ + + + + Sbjct: 250 AVTDLFATLPRRLAQIFNRGGNFQIYELPVTLPIAAVTMHWHEHFDQDEGNVWLRNLMAD 309 >UniRef50_P30979 Uncharacterized HTH-type transcriptional regulator ybeF n=45 Tax=Enterobacteriaceae RepID=YBEF_ECOLI Length = 317 Score = 235 bits (601), Expect = 1e-60, Method: Composition-based stats. Identities = 86/295 (29%), Positives = 142/295 (48%), Gaps = 4/295 (1%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 L+ DLNLL IFE +Y H I AA+ L +TPSA+SQS+Q+LR F DPLFIR G+G+ P Sbjct: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 Query: 67 TTTGLNLHHHLEKNLRGLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSV 126 T ++LH ++ + L + ++I + ++ I + ++ R ++ Sbjct: 86 TAFAMHLHEYISQGLESILGALDIEGSYDKQRTITIATTPSVGALVLPVIYRAIKTHYP- 144 Query: 127 EIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRITD 186 + +AE L + DL+I M +R+V L T LIC +P ++ Sbjct: 145 --QLLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSL 202 Query: 187 NSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLGI 246 E I L+ + ++ + E F +R+I+F ++LTI +A +D+L I Sbjct: 203 EDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAI 262 Query: 247 VPYELYNSYRDFLNLKEIKLEHPLPS-IKLYISYNKSSLNNLVFSRFIDRLNESF 300 +P YN + L+++ I I YNK SL + + ID + +F Sbjct: 263 IPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNAF 317 >UniRef50_A5W6Q9 Transcriptional regulator, LysR family n=12 Tax=Pseudomonas RepID=A5W6Q9_PSEP1 Length = 326 Score = 235 bits (601), Expect = 1e-60, Method: Composition-based stats. Identities = 59/297 (19%), Positives = 122/297 (41%), Gaps = 7/297 (2%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 ++ FDLNLL +F+ + + ++S+AAE L +T VS +L RLR Q DPL +R G+ + Sbjct: 26 MNISNFDLNLLRVFDMLLREQNVSRAAERLALTQPTVSNALARLRDQLGDPLLVRVGRRM 85 Query: 65 APTTTGLNLHHHLEKNLRGLEQTINIVNKSELKKN---FIIYGPQLISCSNNSMLIRCLR 121 PT L L + L+ +EQT+ + E +++ I + L+ L Sbjct: 86 RPTPRALALEGPIRAALQQIEQTLGTGDGFEPQRSHRQLRIALTDFVEQLCMPPLLARLE 145 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 + + + ++ E L DLV+ + + P + +H Sbjct: 146 LLAP-NVRIDVVHLAPNLPAEALDRGDLDLVLGRFDEVPARFTRHPWRRETLQIALRQQH 204 Query: 182 PRI--TDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIA 239 P + + + + + + E+ + R+I++ + L + A Sbjct: 205 PHLVPGQALDLDAFLGLRHIWV-HGGQTRGMVDQWLAEQGLTRQIAYTTPNYLQAAHLAA 263 Query: 240 VTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRL 296 TD+ ++P +L + L L +L L +L + + ++ + ++++ Sbjct: 264 ATDMCVVLPRQLAQQFAHLLPLAVYELPFALEPFELEVVHLSHRQHDPALAWLVEQI 320 >UniRef50_A3YHF6 Transcriptional regulatory protein n=2 Tax=Gammaproteobacteria RepID=A3YHF6_9GAMM Length = 308 Score = 235 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 69/298 (23%), Positives = 129/298 (43%), Gaps = 7/298 (2%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 + K DLNL+VIF+ I + SI+ AA+SL +T +VS ++ R+R + DPLF++ G+GI P Sbjct: 1 MAKTDLNLVVIFDAIMKEKSITSAADSLAMTQPSVSNAVSRMRHAWKDPLFVKEGRGIRP 60 Query: 67 TTTGLNLHHHLEKNLRGLEQTINI--VNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDS 124 T L + + L + I + K +F I + L + Q++ Sbjct: 61 TPYATKLWKRVAEPLAQINHAIAPEYFDPLTSKASFRIGITDGSASIVWPELRHIIEQEA 120 Query: 125 SVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRI 184 I + + + E LL + DLV S + ++ + + H Sbjct: 121 P-NINIYAVPYKVDG-ELLLNNADVDLVFDYYDGNSDEIFYKSMYENQFVTVMRADHELA 178 Query: 185 TDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLL 244 + T E+ + E + + ++ E R+ + +S + IN I T L+ Sbjct: 179 NEELTLERYIKSEHLLVSLSGDVCGIVDDKLAELNAKRRTAMTVNSFASAINLIKQTRLI 238 Query: 245 GIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFI---DRLNES 299 +PY + + +L + LPSIK+ ++++ + ++ I DR+ +S Sbjct: 239 ITMPYPIIAEHLAAGDLVLKPVPLELPSIKISLAWHSRNNHSQALKWLIKVLDRIIDS 296 >UniRef50_A9FW21 Transcriptional regulator, LysR family n=2 Tax=Myxococcales RepID=A9FW21_SORC5 Length = 333 Score = 234 bits (598), Expect = 2e-60, Method: Composition-based stats. Identities = 58/299 (19%), Positives = 114/299 (38%), Gaps = 9/299 (3%) Query: 2 ANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSG 61 + D++ +LNLL E + S+S AA +++ SA+S SL RLR F DPL + G Sbjct: 17 MSEIDIRSINLNLLPALEALLVEGSVSGAARRAHVSQSAMSHSLARLRELFGDPLLVPLG 76 Query: 62 KGIAPTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIR 118 +G+ PT L L L L + + + + F + + ++ Sbjct: 77 RGLTPTPRALQLRAALPAAFEHLRRALASPEPFDPRTSARTFRVATIDYFELTTLPDVLD 136 Query: 119 CL-RQDSSVEIECHDILMSAENAEELLVHRKADLVI--TQMPVISRSVICMPLHTIRNTL 175 L V +E + + LV DL + PV + + PL+ + Sbjct: 137 HLGEHAPFVRLEIERF---SPDVTPALVLGDIDLALFGASQPVPAAGLRRAPLYQDPFAV 193 Query: 176 ICSNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTII 235 + HP I + +A + + + + R+++ R ++ Sbjct: 194 MARKGHPAIKRRLDLDTYVALGHVLVSVEGHRGGAVDRALARLGKTRRVALRLPHFMSAP 253 Query: 236 NSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFID 294 ++ +DLL +P + R+ L+ LP+ ++ +++ ++ F D Sbjct: 254 LAVRSSDLLCTIPSSVAQRARELFGLRVFAPPFELPAAQVVAVWSQRHDDDPAQRWFRD 312 >UniRef50_A3Y808 Transcriptional regulator, LysR family protien n=1 Tax=Marinomonas sp. MED121 RepID=A3Y808_9GAMM Length = 301 Score = 234 bits (597), Expect = 3e-60, Method: Composition-based stats. Identities = 63/292 (21%), Positives = 118/292 (40%), Gaps = 6/292 (2%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 DL + DLNLL++F+ +Y+H S+S AA+ + I+ SA S + RLR +FND LF+R + Sbjct: 1 MDLHQIDLNLLILFDALYRHQSVSLAADEVCISQSAFSHGIARLRKRFNDELFVRVNNQM 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTINIVNKSEL---KKNFIIYGPQLISCSNNSMLIRCLR 121 PT + HL + L + IN + + K F I S L+ + Sbjct: 61 QPTPRAEEIAQHLHQALPFIHNAINDSDHFDASMDKTEFKISATDYTEFSLLPKLVGQVS 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRS--VICMPLHTIRNTLICSN 179 + I+ I A L + + D + I S + + + Sbjct: 121 HQAP-NIKLTVIGAKAPQPLTHLENNEVDFALGFSHEIEASSLIEHHTWLSDSYCTVARK 179 Query: 180 RHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIA 239 HP +T + + + ++ + + + + R +S + S+L +SI Sbjct: 180 NHPALTQGLDLDTFLELKHVRVSPWGEKQGIVDQVLAQHKLKRHVSLQLPSVLVAPHSII 239 Query: 240 VTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSR 291 +DL+ +P + + ++ +P L I ++K + + F Sbjct: 240 HSDLILTMPRIVAEQVAKQVEIEIFTPPISIPDYHLNIYWHKINADKASFKW 291 >UniRef50_B0C7Y6 Transcriptional regulator, LysR family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C7Y6_ACAM1 Length = 305 Score = 234 bits (596), Expect = 4e-60, Method: Composition-based stats. Identities = 62/293 (21%), Positives = 118/293 (40%), Gaps = 3/293 (1%) Query: 8 KKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPT 67 + DLNLL IFE + L++S+AAE L +T AVS +L+RLR ND LF++ G++PT Sbjct: 3 NQIDLNLLHIFEAVMMELNVSRAAERLNMTQPAVSHALRRLRRITNDELFLKVPSGVSPT 62 Query: 68 TTGLNLHHHLEKNLRGLEQTINI--VNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSS 125 L L + + L + ++ + F + L+ L + Sbjct: 63 PKALELWGPIREGLVHIRLALSPPSFEPFSSMQTFTLAMADYSVALFLPKLLPILAHSAP 122 Query: 126 VEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRIT 185 I + + NA +LL + DL + + + + + R I HP Sbjct: 123 -NINIRIVPNTNINAAKLLEQSEIDLAMGRFYRSTVRLRVQEIIGDRYICIMRKDHPLAH 181 Query: 186 DNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLG 245 T +Q + + + + ++ E ++R+I+ + + IA +DL+ Sbjct: 182 KRLTLKQYIKADHLLVTLTGEATGLVDKQLREMDLSRRIALTVNQFTLVPELIAGSDLIS 241 Query: 246 IVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 +P + +L +L + L + +++ S + +L E Sbjct: 242 AIPLRMVERNPFRTDLHITELPLKIAPAFLQMMWHERSQVDPAHEWLRSQLFE 294 >UniRef50_D0LKM3 Transcriptional regulator, LysR family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LKM3_HALO1 Length = 307 Score = 233 bits (595), Expect = 5e-60, Method: Composition-based stats. Identities = 59/297 (19%), Positives = 112/297 (37%), Gaps = 5/297 (1%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 L + +LNLLV + + S+S+AA ++ A+SQSL++LRA F+D L R + Sbjct: 6 LSEINLNLLVSLDALLTERSVSRAARRTGVSQPAMSQSLRQLRAIFDDALLARDRGVLVL 65 Query: 67 TTTGLNLHHHLEKNLRGLEQTIN---IVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQD 123 T L L L +++ ++ + ++ F I + + L+ ++ Sbjct: 66 TPAAERLMVPLRHALVAVQRVLDGEKPFDPGRAERRFTIAVGDFAAVTLLPPLLERASRE 125 Query: 124 SSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPR 183 + I E L + DLVI S + L+ + HP Sbjct: 126 AP-GIGFDVRPAEPTRLFERLATGEFDLVIGAKLDASGDFMRQLLYRDGFVCMARRDHPE 184 Query: 184 I-TDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTD 242 + D E+ A + G + + ER R+I+ R L + +D Sbjct: 185 LSGDALDLERYAALPHVLISPTGEGPSVVDRLLAERGKQRRIALRIPYFLAAPLMVVRSD 244 Query: 243 LLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNES 299 L+ P + ++ L + LPS +Y +++ ++ + + S Sbjct: 245 LVLTAPRSVAGAFASTHALALFEPPLELPSFGVYQLWHQRYQSDDAHRWLRELVAAS 301 >UniRef50_D1TCI7 LysR family transcriptional regulator n=2 Tax=Burkholderia RepID=D1TCI7_9BURK Length = 329 Score = 233 bits (595), Expect = 5e-60, Method: Composition-based stats. Identities = 64/306 (20%), Positives = 131/306 (42%), Gaps = 7/306 (2%) Query: 1 MANL--YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFI 58 MAN+ D ++FDLNLLV F + + S+++AA+ L + AVS +L+RLR F D LF+ Sbjct: 14 MANIIENDFRRFDLNLLVTFRALLEERSVTRAAQRLLLGQPAVSGALKRLRETFGDELFV 73 Query: 59 RSGKGIAPTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSM 115 R+ +G+ PT L L +E L+ L Q + ++ + + ++ F I + Sbjct: 74 RTPQGMTPTPRALELARQIEPFLQSLHQALTQPSVFDPASAQRVFRIGLSDSLELLLMPE 133 Query: 116 LIRCLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTL 175 ++ L ++ ++ + A +L +L + MPL + R Sbjct: 134 IMARLA-AAAPGVKLIARSTDSTRAAAMLDDGAIELAVGVFRECVPWQRLMPLFSWRFVS 192 Query: 176 ICSNRHPRI-TDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTI 234 + + + R + + ++ + + I ++ + +NR++ F S+ T Sbjct: 193 VYNPQLVRTRRKHLSMDEFLRHRHVLTSFSAELRGFIDERLELQGLNREVVFSSSNFATS 252 Query: 235 INSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFID 294 + T + VP + +RD L L L +P ++ + + + + + Sbjct: 253 PFIVQRTAAIATVPEFIGRVWRDTLGLALSPLPFEVPGYEVSLMWAAAHDQDPALAWLKR 312 Query: 295 RLNESF 300 ++F Sbjct: 313 EFADAF 318 >UniRef50_C4UEX0 Lys-R type regulatory protein n=1 Tax=Yersinia ruckeri ATCC 29473 RepID=C4UEX0_YERRU Length = 299 Score = 233 bits (595), Expect = 6e-60, Method: Composition-based stats. Identities = 61/299 (20%), Positives = 119/299 (39%), Gaps = 4/299 (1%) Query: 4 LYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKG 63 + L+ DLNLLVI + + +S+AA+ LY++ AVS +L RLR +D L +R G Sbjct: 1 MNSLRAIDLNLLVILDVLLSERHVSRAAKRLYMSQPAVSHALNRLRYLLDDELLVRVAGG 60 Query: 64 IAPTTTGLNLHHHLEKNLRGLEQTINI--VNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 T L L++ L + I + + F I + L++ LR Sbjct: 61 FQLTRRAAALIEPLKEVLEKVRYIIGTGNFEPALATQRFRIALSDYGAAMVLPGLLQRLR 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 Q + I+ S E E ++ + DL + P + + L + + Sbjct: 121 QQAP-GIDLVVEQASREQMIEQVMAGQLDLALGVFPDLPADMTASRLFEEHFVCVIDQAN 179 Query: 182 PRITDN-STYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAV 240 P T + + + + + V +++ + E + R+++ L ++A Sbjct: 180 PLARKKYFTLDDYLVQPHLLVSMRGESVGEVETALAELGVRRRVAAIMPHFLLAPQALAG 239 Query: 241 TDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNES 299 TDLL V + ++ +NL+ + L +P+ ++ + ++ ES Sbjct: 240 TDLLLTVASRVVTIQQESMNLQRLTLPFTVPNFDFVQIWHNRNHGKEDHRWLRQQVAES 298 >UniRef50_D0RY94 Transcriptional regulator n=4 Tax=Acinetobacter RepID=D0RY94_ACICA Length = 311 Score = 233 bits (594), Expect = 7e-60, Method: Composition-based stats. Identities = 68/303 (22%), Positives = 128/303 (42%), Gaps = 6/303 (1%) Query: 3 NLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGK 62 N+ L + DLNL +F IY+ ++++A+E L+++ AVS +L RLR FNDPLFIR G Sbjct: 7 NVASLARIDLNLFRVFVTIYKEKNLTRASEQLFLSQPAVSHALARLRDHFNDPLFIRDGH 66 Query: 63 GIAPTTTGLNLHHHLEKNLRGLEQTINIVNKSELKK---NFIIYGPQLISCSNNSMLIRC 119 G+ P+ L +E++L+ + Q I + + I +I+ Sbjct: 67 GVVPSPLAKRLWPKIEQSLQLMHQAIQSTYDFVPARDLKHLTIAMNDEYEGIFLPSIIQH 126 Query: 120 LRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSN 179 L Q + ++ + + + +N L K D I + S+ + +I Sbjct: 127 LTQF-NPNLQLNSVRIDRKNLRHELSTGKIDFAIDVQHSVEDSIGYECCTKDQFVVISRK 185 Query: 180 RHPRITDN-STYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSI 238 +HP ++ T E + + + S+ G + ++ + R ISFR T I I Sbjct: 186 QHPLLSSTDLTKEIYLDAKHITVSSRPTGRVFEDFFLSKQGIKRTISFRCQQYETAIRLI 245 Query: 239 AVTDLLGIVPYELYNSYRDFLN-LKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLN 297 TD L +P ++D +K L + ++ + +++ + +L Sbjct: 246 TQTDHLLTIPQCQIAYFKDNYPQIKVHPLPIDIAGYQMNLYWDQQKSHEHQIVWCKAQLL 305 Query: 298 ESF 300 + Sbjct: 306 QIM 308 >UniRef50_B0BQD1 HTH-type transcriptional activator n=15 Tax=Proteobacteria RepID=B0BQD1_ACTPJ Length = 299 Score = 233 bits (594), Expect = 7e-60, Method: Composition-based stats. Identities = 57/300 (19%), Positives = 115/300 (38%), Gaps = 7/300 (2%) Query: 4 LYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKG 63 + D++ DLNLL F+ + Q +++KAA+ L +T A+S L RLR F DPLF+R G Sbjct: 1 MRDIRTVDLNLLKAFDALLQERNVTKAAQRLSVTQPAMSAMLNRLRDSFGDPLFVRVQHG 60 Query: 64 IAPTTTGLNLHHHLEKNLRGLEQTINI--VNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 I PT L L ++ L + + + + + I + + + L+ Sbjct: 61 IEPTARALALMPSVKTVLAEVNRMLRPVEFDPQTAEMTIKIASTDYGLEAIGTPFLSHLK 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 Q + +I + + + D+ + I + PL T + H Sbjct: 121 QLAP-KIRVAFLPAQDVDLLAQFEQARIDIALVSTQHIPADLHSKPLLTEHYVCVMRADH 179 Query: 182 PRITDNSTYEQIMAEEFTQLISKSAGVDDI-QMEIDERFMNRKISFRGSSLLTIINSIAV 240 P + +F + + + + R++S + + N + Sbjct: 180 PMANQLLNLDNFCELDFAMMSYDGGQFYGVCDEALAKLGKTRRVSVSVNHFSLLPNILRT 239 Query: 241 TDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 TD++ ++P L + L L + L +++++ + + + + L ES Sbjct: 240 TDVVALIPSRLSHHLT---GLICKTLPLEVQGFSLQMAWHERTHQDPAYQWIRNLLVESL 296 >UniRef50_Q7MCM8 Transcriptional regulator n=8 Tax=Vibrionaceae RepID=Q7MCM8_VIBVY Length = 298 Score = 232 bits (593), Expect = 9e-60, Method: Composition-based stats. Identities = 66/293 (22%), Positives = 123/293 (41%), Gaps = 3/293 (1%) Query: 10 FDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTT 69 D NLL +F +Y+H SI+ AA+++ +T VS L+RL+ Q LF R G+GIAPT Sbjct: 5 IDFNLLKVFVTVYRHRSITLAADAMGLTQPGVSGILKRLQEQLGVTLFTRDGRGIAPTHH 64 Query: 70 GLNLHHHLEKNLRGLEQTINIVNKS--ELKKNFIIYGPQLISCSNNSMLIRCLRQDSSVE 127 L +E L + + + + + F+IY P+ + + + ++ Sbjct: 65 AHELARQVEPALSQIHNALESLEAFRTDTYRKFVIYAPEPLMLTLLPKIEGD-STLGKID 123 Query: 128 IECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRITDN 187 IE + + L ++ADL I + + S L LI HPRI Sbjct: 124 IELQHMPYDVDEQFTRLNQQQADLAIDFVHHSAPSFYSEKLMNDEICLIARRGHPRIQGA 183 Query: 188 STYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLGIV 247 + ++ E+ L + V +E R+++ S++ ++ +A +D + +V Sbjct: 184 ISRDEYYQEKHITLKMRRENVYLADYFTEEFLNVRRVAAECDSMVAQMSLVATSDCIAMV 243 Query: 248 PYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 L + + L L+ + I + + +N+ +RL+ F Sbjct: 244 TRSLAEQFAETLGLQVLHSPMTAIPITYRLLIHNREINSPANQWLRERLSRYF 296 >UniRef50_A1VMI6 Transcriptional regulator, LysR family n=28 Tax=Bacteria RepID=A1VMI6_POLNA Length = 333 Score = 232 bits (592), Expect = 1e-59, Method: Composition-based stats. Identities = 55/282 (19%), Positives = 112/282 (39%), Gaps = 6/282 (2%) Query: 22 YQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTTGLNLHHHLEKNL 81 Y S+++AAE L + VS L RLR Q DPLF+R+ +G+ PT L + + L Sbjct: 53 YNTRSVTRAAEQLGQSQPTVSIWLARLRRQLGDPLFVRTPEGMLPTPRTDALIATVREVL 112 Query: 82 RGLE---QTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSVEIECHDILMSAE 138 GL ++ + + + ++ F I+ + L +R + ++ + A Sbjct: 113 EGLRRLSESESRFDPATAQRGFRIFMTDASHITLLPRLFSHVRALAP-QVRLEAATIDAR 171 Query: 139 NAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRITDNSTYEQIMAEEF 198 L + DL + +P + L +C+ RHPRI + T + AE Sbjct: 172 -MAPALQSGEGDLALGLVPGLEAGFYQQTLFGQDWICLCNARHPRIGEMFTLQDYAAEAH 230 Query: 199 TQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLGIVPYELYNSYRDF 258 ++S G + + + + R++ L + ++ +DL+ +P + + + Sbjct: 231 IGIVS-GTGYQLLDGALKSQGIARRVLLELPGFLGLAAILSTSDLVATLPRHIGETLANA 289 Query: 259 LNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 L+ + +P + ++ ++ E F Sbjct: 290 AGLRVLPCPFEIPGFTVKQYWHARYHHDAGNRWLRGVCAELF 331 >UniRef50_B7V4S2 Probable transcriptional regulator n=7 Tax=Pseudomonas aeruginosa RepID=B7V4S2_PSEA8 Length = 304 Score = 232 bits (592), Expect = 1e-59, Method: Composition-based stats. Identities = 52/301 (17%), Positives = 116/301 (38%), Gaps = 3/301 (0%) Query: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 M ++DL++ DLNLLV+ + + +S+AA+ L ++ AVS +L RLR F DPL +R Sbjct: 1 MQQIHDLRRIDLNLLVVLDALLSERHVSRAAQRLAMSQPAVSHALGRLRELFGDPLLVRV 60 Query: 61 GKGIAPTTTGLNLHHHLEKNLRGLEQTIN--IVNKSELKKNFIIYGPQLISCSNNSMLIR 118 + T+ L L L+ +L + I +++F + + L+R Sbjct: 61 KSRMQLTSLALELAPKLQASLDQVRGVIGGPTFEPVRSRRHFRLGMSDYGAWVVLPALLR 120 Query: 119 CLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICS 178 +Q + + + + + D + P++ V L R +C Sbjct: 121 Q-QQALAPGVSFGIVQEPRLETARQVAEGQLDCALGVFPLLPEGVRARRLFEERFVCVCR 179 Query: 179 NRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSI 238 D + ++ +A ++ + +++ +++R + R+++ + Sbjct: 180 RSLFDRPDGLSLDRYLAARHVRVSLQDNPAEEVDSALEKRGLRRQVALTLPHFTVAPALL 239 Query: 239 AVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 A TDL+ + R L + +P + + + +++ Sbjct: 240 AGTDLVLTIAERTLERLRLPEELALCEPPLAIPRFDYVQIWRGDAEREAAGAWLREQIQA 299 Query: 299 S 299 + Sbjct: 300 A 300 >UniRef50_B6R1K2 Transcriptional regulator, LysR family n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R1K2_9RHOB Length = 293 Score = 232 bits (592), Expect = 1e-59, Method: Composition-based stats. Identities = 60/293 (20%), Positives = 120/293 (40%), Gaps = 4/293 (1%) Query: 10 FDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTT 69 DLNLL++FE +Y ++++A++ L +T AVS +L+RLR F DPLFIR+ G+ PT Sbjct: 1 MDLNLLLVFEAVYSERNLTRASKRLNLTQPAVSNALRRLRDTFQDPLFIRTADGMVPTDL 60 Query: 70 GLNLHHHLEKNLRGLE--QTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSVE 127 L + L L ++ + + L ++F I L++ L + + Sbjct: 61 AEQLAGRVLDALEMLRSFESRESFDPAGLSRDFRISISDYNGMLVLPRLLKELAEQAP-G 119 Query: 128 IECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRITDN 187 + + + E L + DLV+ + ++ PL++ + S + Sbjct: 120 VSITTSQIQRAHVSEHLSTGQVDLVLAPKQDV-ANLSYEPLYSDDYVGVASAHYGPEGGQ 178 Query: 188 STYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLGIV 247 + E+ E + G + + + + RK+ R S + TI + + + + + Sbjct: 179 MSLEEYCQREHLLFSLEGYGRSTVDVALSKLGKKRKVVLRSSHVHTIPHVLEGSAFIATL 238 Query: 248 PYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 P + Y L L L ++ + ++ ++ + E F Sbjct: 239 PRLITLDYLKRFELTSFSLPFELKGHEVGLHWHARQHHDPAHEWLRGLIKELF 291 >UniRef50_B4TAI7 LysR-family transcriptional regulator n=40 Tax=Enterobacteriaceae RepID=B4TAI7_SALHS Length = 317 Score = 232 bits (591), Expect = 1e-59, Method: Composition-based stats. Identities = 84/295 (28%), Positives = 151/295 (51%), Gaps = 4/295 (1%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 L+ DLNLL IFE +Y H I AA+ L +TPSA+SQS+Q+LR F DPLFIR G+G+ P Sbjct: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKILNLTPSAISQSIQKLRTIFPDPLFIRKGQGVTP 85 Query: 67 TTTGLNLHHHLEKNLRGLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSV 126 TT +LH ++ + L + +++ + ++ I + ++ + +R Sbjct: 86 TTYATHLHEYISQGLESILGALDLTGSYDKQRTITIGTTPSVGALVMPIIYQAIRPRYP- 144 Query: 127 EIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRITD 186 + + ++AE L + DL+I +RS+ L + ++C HP + + Sbjct: 145 --QLLLRNIPVDDAESQLSQFQTDLIINTHSYNNRSIQHHVLFSDTLEIVCRQHHPCLAN 202 Query: 187 NSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLGI 246 T E++ + + T L+ + + ++ + E F +++ISF ++ TI + IA +DLLG+ Sbjct: 203 AITEERLNSADHTFLMLEGQHLSLLRQRLQETFPDQQISFSSYNIFTIASLIASSDLLGL 262 Query: 247 VPYELYNSYRDFLNLKEIKL-EHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 +P Y+ + L+ + ++ + YNK SL + V ID + E+F Sbjct: 263 MPTRFYDLFSRCWPLERLPYAPVNSEQVEFSLHYNKLSLRDPVLENVIDIIREAF 317 >UniRef50_P52679 PCP degradation transcriptional activation protein n=1 Tax=Sphingobium chlorophenolicum RepID=PCPR_SPHCR Length = 307 Score = 231 bits (589), Expect = 3e-59, Method: Composition-based stats. Identities = 53/292 (18%), Positives = 105/292 (35%), Gaps = 6/292 (2%) Query: 12 LNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTTGL 71 L L++F+ +Y+H S KAA +L + +S+ L +LR F+DPLF+R+ G+ PT Sbjct: 8 LGHLMVFDALYRHGSAGKAAHALSMPQPTLSRWLAQLRTHFDDPLFVRTRSGMEPTPLAA 67 Query: 72 NLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSVEI 128 H+ + + Q + + +NF I L L + + ++ Sbjct: 68 RAAPHIAEMIAIYRQHVRSELRFDPGTSNRNFRIAASDFGQALMLPRLYATLEETAP-QV 126 Query: 129 ECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRITDNS 188 + + E L D+ P +S + L + HP +T Sbjct: 127 RVTGVNLRHGPLVEELESGSIDIAFGGFPTLSAGIKTQTLFREEYVCVMRQSHPALTHGL 186 Query: 189 TYEQIMAEEFTQLISKSAG--VDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLGI 246 E + + + ++ + E I F + L TD++ Sbjct: 187 DLEAFRQCRHIIVTAHEFNHVHEQVEARLLELLPPESIRFTTENFLVSAVIAEETDVILT 246 Query: 247 VPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 +P L + + L + LPSI++ +++ + + + Sbjct: 247 IPSRLARWFANRGGLTIFPVPIELPSIEVKQYWHERYDKDPGNIWLRRVIAK 298 >UniRef50_A5WDE8 Transcriptional regulator, LysR family n=1 Tax=Psychrobacter sp. PRwf-1 RepID=A5WDE8_PSYWF Length = 302 Score = 231 bits (589), Expect = 3e-59, Method: Composition-based stats. Identities = 71/292 (24%), Positives = 120/292 (41%), Gaps = 6/292 (2%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 + D+ LL++F+ IYQ +ISKAA+ L I A S L +LR F+DPLF+R G + P Sbjct: 1 MFDIDVRLLLLFQAIYQQNTISKAAQKLDIGQPAASLGLNKLRQHFDDPLFVRVGNQMQP 60 Query: 67 TTTGLNLHHHLEKNLRGLEQTINIVNKSELK---KNFIIYGPQLISCSNNSMLIRCLRQD 123 T T NL + L+ + + + E K + F I + LI+ L+Q Sbjct: 61 TQTAQNLFPLVNNALQHIRAVNDYTHHFEPKNSSRRFHISMTDISHMIIVPKLIKYLKQH 120 Query: 124 SSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPR 183 + DI + + + DL I +P + +++ HPR Sbjct: 121 AP--HTKLDISAINSDTPSRMSSGEIDLAIGYIPHLEAGFFQQTFFEQHYSVVVRQDHPR 178 Query: 184 ITDN-STYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTD 242 +T N T E E+ +IS G ++ + R + R I+ + L + I TD Sbjct: 179 LTQNTLTLEAYQQEQHADVISSGTGHYLLEDHLRRRHIKRHIAITLPTYLGVGLIIQQTD 238 Query: 243 LLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFID 294 L+ +P +L L + L +P ++ +++ N Sbjct: 239 LVATLPDKLAKLLLQENRLHTLPLPLDIPKYQVKQHWHERMHANPDNQWLRQ 290 >UniRef50_A6X639 Transcriptional regulator, LysR family n=1 Tax=Ochrobactrum anthropi ATCC 49188 RepID=A6X639_OCHA4 Length = 324 Score = 230 bits (588), Expect = 3e-59, Method: Composition-based stats. Identities = 60/319 (18%), Positives = 127/319 (39%), Gaps = 24/319 (7%) Query: 4 LYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKG 63 + + DLNL+ +F + + +++KA E L +T SAVS +L +LR +D LF+R +G Sbjct: 1 MSSIHNIDLNLIRVFNALMEERNVTKAGERLNLTQSAVSHALGKLRYILSDELFVRGPQG 60 Query: 64 IAPTTTGLNLHHHLEKNLRGLEQTINI--VNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 + PT L L L + ++ + + +F++ + ++ L Sbjct: 61 MHPTPRAEELSQPLRSALADISAALSPVQFDPATADMSFVVATSDFYIGTLFPAVMERLE 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 +++ I L + N E L LV+ I L ++ N I H Sbjct: 121 KEAP-GIRLWLRLFNDLNLVEELDRGTLHLVVGAFGRIPSRFRRETLVSVDNVWIMRKDH 179 Query: 182 PRITDNSTYEQIMAEEFTQLISKS---------------------AGVDDIQMEIDERFM 220 P + T E + ++ + ++ + E + Sbjct: 180 PASSGPLTIETLGHYPHIDVLLSGRAAMEAAGMQEQEGLERAFVTSNPPFLEGLLREVGL 239 Query: 221 NRKISFRGSSLLTIINSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYN 280 +R+I S +L + +A T+++ ++P + +Y+D L + +PLP+ ++ + + Sbjct: 240 SRRIGATVSLILAVPPLVAATNMIALLPRSVAETYKDTYGLVLHEAPYPLPATQINMLSH 299 Query: 281 KSSLNNLVFSRFIDRLNES 299 + + + L E+ Sbjct: 300 NTFGAHPAVAWLRSVLREA 318 >UniRef50_B9JQ31 Transcriptional regulator n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JQ31_AGRRK Length = 296 Score = 230 bits (588), Expect = 3e-59, Method: Composition-based stats. Identities = 65/290 (22%), Positives = 120/290 (41%), Gaps = 5/290 (1%) Query: 11 DLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTTG 70 DLNL+ F IY+ S+S AA L +T +VS +L RLR +D LF R+ G+ PT Sbjct: 3 DLNLIRAFIAIYETESVSGAAVKLNLTQPSVSHALSRLRDMLDDTLFTRTRDGMKPTFVA 62 Query: 71 LNLHHHLEKNLRGLEQTIN---IVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSVE 127 ++ L +E I + + F + L + ++ L Q++ + Sbjct: 63 ERMYGIFRSALSEIETAIASRWSFDPKSSNQVFKLAFSDLGEMTFLPHILPRLSQEAP-K 121 Query: 128 IECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRITDN 187 + + + E ++ K D I P+ R + S RHPRI D Sbjct: 122 VGIEVVELEVEKLDDWFATGKIDAAIFNSTSAKVQSRSEPIFQERYVCLVSARHPRIRDQ 181 Query: 188 STYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLGIV 247 + EQ ++E + S S G ++ +I R++S R + + +A T+LL + Sbjct: 182 VSLEQYLSEGHIVVSSHS-GHRQVEDQIRAIGAARQVSLRLPHFTGLHDIVAKTELLATL 240 Query: 248 PYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLN 297 P + + +K + P+P ++ + + ++ + + L Sbjct: 241 PSRTAHMFASSGMVKYCTIPLPIPEFEVRLHWRETDGEIEAQAWLREILK 290 >UniRef50_A9GGP1 LysR-family transcriptional regulator n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GGP1_SORC5 Length = 312 Score = 230 bits (588), Expect = 3e-59, Method: Composition-based stats. Identities = 59/301 (19%), Positives = 119/301 (39%), Gaps = 8/301 (2%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 +L D+NL++ + + Q S++ AA + ++ A+S +L RLR F+DPL IR G+ + Sbjct: 1 MNLSAIDVNLVIALDALLQERSVTLAARRVGLSQPAMSHALTRLRELFSDPLLIRVGRQM 60 Query: 65 APTTTGLNLHHHLEKNLRGLE----QTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCL 120 A T+ + + + L +T + + + F I + + L L Sbjct: 61 ALTSRAEAMTPQVTAIVHDLAGLFGETTPTFDPATSDRAFRIAATEYVELVLMPRLNAAL 120 Query: 121 RQDSSVEIECHDILMSAENAEELLVHRKADLVITQMP--VISRSVICMPLHTIRNTLICS 178 Q + H + + A + L + DL I P + + PL R + Sbjct: 121 AQG-GPRLALHLLPLDGR-AVDALRSGEIDLAIGVFPQESLPPDLRRAPLFDDRFAGLAR 178 Query: 179 NRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSI 238 HP + A + + A I R + R + +L + ++I Sbjct: 179 MSHPTARGQVDLQTYAALPHVVVPRRGAHDGVADDLIAARGIARHEAMTVPHVLLVPHAI 238 Query: 239 AVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 +DL+ V L ++ + L+ L LP I++ +++N + + + + + Sbjct: 239 TASDLVATVATRLGRAFSSLVPLRTFDLPFELPPIEIAMAWNSRTERDPARAWLRGVVTD 298 Query: 299 S 299 + Sbjct: 299 T 299 >UniRef50_A1U1I0 Transcriptional regulator, LysR family n=67 Tax=Proteobacteria RepID=A1U1I0_MARAV Length = 336 Score = 230 bits (588), Expect = 3e-59, Method: Composition-based stats. Identities = 61/307 (19%), Positives = 117/307 (38%), Gaps = 17/307 (5%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 D+ + DLNLLV + + + +++KAA L IT A+S L+RLR F DPL +R+ +G+ Sbjct: 1 MDISRVDLNLLVYLDVLLRERNVTKAANHLGITQPAMSNGLRRLRDLFGDPLLVRTSEGM 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTINIVNKS---ELKKNFIIYGPQLISCSNNSMLIRCLR 121 T L + L +EQ + E ++ F I ++R +R Sbjct: 61 TATERARELQPLVRGILSDIEQAVQEKTPFAAGESQRVFRIMASDYAESCLMPRVLRRIR 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 Q++ D+L ++ + + + D+ I + I +S L T + + R+ Sbjct: 121 QEAP--HVTLDVLTPSDVSFLDVEQGRLDMAINRFDKIPQSFHQKTLWTEYFACLMNARN 178 Query: 182 PRITDNSTYEQIMAEEFTQLISKSAGV------------DDIQMEIDERFMNRKISFRGS 229 P + + T + + + GV + + R+IS Sbjct: 179 PILKEPFTLDTYLDASHIWVSKTGFGVGVGVNPKDVQRLGWVDEALGRMGRKRQISVFTR 238 Query: 230 SLLTIINSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVF 289 + DL+ +P +D NL +P +L ++++ +N Sbjct: 239 HYQVAMLLAEQHDLIATLPSRAAWLQKDNPNLVVKVPPFEIPPFELKMAWSPLLQHNSDH 298 Query: 290 SRFIDRL 296 + Sbjct: 299 QWLRKLI 305 >UniRef50_C5CVL6 Transcriptional regulator, LysR family n=5 Tax=cellular organisms RepID=C5CVL6_VARPS Length = 327 Score = 230 bits (588), Expect = 4e-59, Method: Composition-based stats. Identities = 65/303 (21%), Positives = 120/303 (39%), Gaps = 6/303 (1%) Query: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 M + K DL+L+ + + S+S+AA L + AVS +L+RLR DPL +RS Sbjct: 1 MRDQALFDKIDLHLIRVLHTVLTDRSVSRAAIRLGMYQPAVSAALKRLRELSGDPLLVRS 60 Query: 61 GKGIAPTTTGLNLHHHLEKNLRGLEQTINIVNKSELK---KNFIIYGPQLISCSNNSMLI 117 G G+ PT GL + LR E + E + F I + ML+ Sbjct: 61 GSGMVPTDAGLRMIEPAASILRAAEMLFSDARGFEPQSAATTFRIAASDYMDPLFLPMLV 120 Query: 118 RCLRQDSSV-EIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLI 176 +++++ + +IE H + ++ L + DLVI + L + Sbjct: 121 AHVKREAPLCQIEIHALTPDSDYHGH-LALGQVDLVIGNWLKPPEDLHMARLFGDEVVSL 179 Query: 177 CSNRHPRITDNSTYEQIMAEEFTQ-LISKSAGVDDIQMEIDERFMNRKISFRGSSLLTII 235 + HP + E +A E G I +DE R I+ R + I Sbjct: 180 VNQDHPAVRRGWDLETWLAAEHIAPTPMHPGGRGIIDQMLDELGRQRNITARCAHFSLIP 239 Query: 236 NSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDR 295 + +A + L+ + + L +K ++ LP + Y +++ + ++ + Sbjct: 240 DMVASSLLVLTTGRQYCERFAARLPVKILECPVALPRLMYYQLWHERTHSSSSARWLREC 299 Query: 296 LNE 298 + + Sbjct: 300 IKD 302 >UniRef50_A4XX96 Transcriptional regulator, LysR family n=3 Tax=Proteobacteria RepID=A4XX96_PSEMY Length = 312 Score = 230 bits (587), Expect = 4e-59, Method: Composition-based stats. Identities = 61/296 (20%), Positives = 118/296 (39%), Gaps = 7/296 (2%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 D ++ DLNLLV E + ++++AA L+++ AVS L RLR FNDPL I + +G+ Sbjct: 1 MDTRRLDLNLLVTLEALLIEQNVTRAAARLHLSQPAVSAQLSRLRDVFNDPLLIPAQRGM 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 PT L L L + L + T+ + I + + L+ +R Sbjct: 61 TPTVKALELLVPLRQALDQVRATVTTHLNFEPATASLTVSIACTDYVQAALIKHLVVAMR 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 +++ + ++ E + + DL + M ++ L+ LI H Sbjct: 121 REAP-GVRIALRILDVPQLELQMTRGEVDLAVINMNGAPPALHAQHLYDESYVLIGRRGH 179 Query: 182 PRITDNSTYEQIMAEEFTQLISKSAGVD-DIQMEIDERFMNRKISFRGSSLLTIINSIAV 240 P + T ++ E + + G + + R + R + SS L + +A Sbjct: 180 PSLHAGLTVDEFAQLEHVVVSLRGGGFSTSVDNALVARGLRRNVVLSASSFLPVPELVAQ 239 Query: 241 TDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRL 296 +D + +VP L L + P+ + + +++ S + F + + Sbjct: 240 SDCVALVPRRLVE--GRDEQLLCVAPPLPVEGFAIGMFWHERSDGHAGFRWVREFI 293 >UniRef50_A6FDU8 Transcriptional regulator, LysR family protein n=1 Tax=Moritella sp. PE36 RepID=A6FDU8_9GAMM Length = 280 Score = 230 bits (587), Expect = 4e-59, Method: Composition-based stats. Identities = 70/295 (23%), Positives = 126/295 (42%), Gaps = 19/295 (6%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 + FD+NL+ F +Y+ SI+KAAE L ++ A+S +++RL PLFIRSG+ ++P Sbjct: 1 MHDFDMNLIKPFAKVYELNSITKAAELLNVSQPAISGAIKRLETYLGYPLFIRSGRKLSP 60 Query: 67 TTTGLNLHHHLEKNLRGLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSV 126 T N + + L ++ + K++FI+Y P+ I L + S + Sbjct: 61 TPNAQNFYSQVSTVLEIVDNALGN------KEHFIVYAPESI-----------LLKLSGI 103 Query: 127 E-IECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRIT 185 I+ + S E+ L RK DL I + S + L+C HP +T Sbjct: 104 HDIQLIESSDSEEDTFNDLRMRKIDLAIDNVTQQDNSFCFELVRKEHLKLVCCKNHPTVT 163 Query: 186 DNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLG 245 D+ T E + + + ++ R I + SS ++ ++ +D + Sbjct: 164 DSITMEHYLQLGHVAMKLVRNNMRAVEYFAKTALKARDIRVQVSSPANMMLAVQNSDYIA 223 Query: 246 IVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 +P L D L LK I+ + I ++ Y+K L + + + + Sbjct: 224 AIPEGLC-HIADSLGLKVIEPPFTMKPIDFHLIYHKRYLKDKGHQQLRETIKNKL 277 >UniRef50_Q1ZB78 Transcriptional regulator, LysR family protein n=1 Tax=Photobacterium profundum 3TCK RepID=Q1ZB78_PHOPR Length = 305 Score = 230 bits (587), Expect = 5e-59, Method: Composition-based stats. Identities = 72/292 (24%), Positives = 134/292 (45%), Gaps = 4/292 (1%) Query: 8 KKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPT 67 K FDLNLL +F +Y S +KAAE L +T S+VS ++ RL+ + LFIR+G+GI PT Sbjct: 5 KHFDLNLLRVFLSVYNTCSFTKAAEELDLTQSSVSNAILRLKKTVGEELFIRAGRGIQPT 64 Query: 68 TTGLNLHHHLEKNLRGLEQTINIVNKSEL---KKNFIIYGPQLISCSNNSMLIRCLRQDS 124 L+H LE ++ +EQT+N + + + F +Y + + L + L+ + Sbjct: 65 AVANQLYHQLENSMLKVEQTVNSFEQFDPLHTAREFHVYAIESVIHILQPRLDKYLKDYA 124 Query: 125 SVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRI 184 I H++ + + L + D+V+ + S+ + + + + S HPRI Sbjct: 125 P-TIIFHELPAQEQQMYDQLQAEQIDVVLDIVQPDVVSLSSEAILSEKMCCVVSRHHPRI 183 Query: 185 TDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLL 244 + + EQ + E + + ER RK+ SSL++++ + A ++ + Sbjct: 184 NEVLSKEQFLEESHVFFNMRRFNLTIADYFTYERLPYRKMYCEHSSLMSMLATTARSEAI 243 Query: 245 GIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRL 296 + PY L L+ I + I +++ + NN + + + Sbjct: 244 SMAPYSLAKQCEGMFELRLIDSPYKTKPINIFMVWPSRLKNNTSHTWLREAI 295 >UniRef50_C0ZNV8 Putative LysR family transcriptional regulator n=1 Tax=Rhodococcus erythropolis PR4 RepID=C0ZNV8_RHOE4 Length = 298 Score = 230 bits (587), Expect = 5e-59, Method: Composition-based stats. Identities = 64/296 (21%), Positives = 124/296 (41%), Gaps = 8/296 (2%) Query: 9 KFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTT 68 DLNLL +F+ + S++ AAE L ++ A S++L RLR +DP+F+R+G+G+ PT Sbjct: 4 DMDLNLLRVFDALVAEGSVTGAAERLNLSIPATSRALGRLRRAMDDPIFVRAGRGLVPTP 63 Query: 69 TGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCL-RQDS 124 L + L G + + +EL++ F+I + + S L+R + Sbjct: 64 FALRAAPQVRSLLEGAQGLLIDRKNFEPAELERTFVIRINEGTAASLTPALVRRFAAEAP 123 Query: 125 SVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRI 184 + I C + + L + DL I P+ S V L+ + + S P Sbjct: 124 NAVIRC---VGEGNEDVDSLRNGSIDLDIGADPLPSSDVCSEILYREGHVGLVSKSSPLA 180 Query: 185 -TDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDL 243 T T Q+ + I + M R++ +S + A +DL Sbjct: 181 RTAQPTLAQLCEHPHVSTSRRGRTHGPIDDALSAVGMRRRVIAVVASPVAAALMAADSDL 240 Query: 244 LGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNES 299 + +VP L + L++ + LP++ ++ ++ ++ +++ E+ Sbjct: 241 VALVPERLARYFAARLDVAWFAVPTELPAVTIHQQWHGRLDHDPAHKWLREQVREA 296 >UniRef50_B7RV99 Transcriptional regulator, LysR family protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RV99_9GAMM Length = 303 Score = 230 bits (586), Expect = 5e-59, Method: Composition-based stats. Identities = 64/297 (21%), Positives = 127/297 (42%), Gaps = 8/297 (2%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 L K DLNL V+F+ +Y+ S+++ A++L++T AVS +L RLR F+D LF+RS +G+ P Sbjct: 3 LDKVDLNLFVVFDALYRERSVTRVAQALHLTQPAVSNALSRLRQSFDDQLFVRSPRGMQP 62 Query: 67 TTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQD 123 T + ++K L L++T + + F + + L L Q Sbjct: 63 TPVAEAISVDVQKALGLLQKTTLSGQRFDPGSAEMTFRLGMSDVAQNMVLPGLHNALAQL 122 Query: 124 SSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPR 183 + + + +A L DL++ V +R + + L ++ + + HP Sbjct: 123 AP-GVTIEAYYLDRASAVAQLKSGDLDLLLDAPQVNARELGQLHLGSLLYRVAMAKAHPL 181 Query: 184 ITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDL 243 + +Q +A + + ++ G + + + RK+ R A +DL Sbjct: 182 AQVDLDIDQYLAAKHVHVSARPRGRGQVDLALHAIGHRRKVVVRVQQYAVAAAITAQSDL 241 Query: 244 LGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 L P + D L ++ + S+ L + +++S+ + + L + F Sbjct: 242 LWTAPGSVI----DHPELHVVETPFQVESLVLNLYWHRSAAEDPANAWMRKMLAQQF 294 >UniRef50_A6FYP7 Transcriptional regulator, LysR family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FYP7_9DELT Length = 312 Score = 230 bits (586), Expect = 5e-59, Method: Composition-based stats. Identities = 62/302 (20%), Positives = 120/302 (39%), Gaps = 13/302 (4%) Query: 6 DLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIA 65 +L + DLNLLV F+ + + S+++AA L +T SA+S +L+RLR D L +R+ G+A Sbjct: 8 ELAQLDLNLLVAFDVLAEERSVTRAAARLGVTQSAMSHTLRRLRGVLEDELLVRTRGGMA 67 Query: 66 PTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQ 122 T L + L L++ + + + +++F + GP L LI Sbjct: 68 LTPRAAALVAPVRTGLTTLQRALADPEGFDPATSERHFRLTGPDLFELLYLPRLIAGFGA 127 Query: 123 DSSVEIECHDILMSAENAEELLVHRKADLVI------TQMPVISRSVICMPLHTIRNTLI 176 + + ++ + L + DL I + ++ L Sbjct: 128 SAG-RLSVTLAHVAPRQLADQLETGELDLAITARMLDGREQPAQPGLMRRVLLRDGWRCF 186 Query: 177 CSNRHPRIT--DNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTI 234 HP +T + + +A + G + + + E+ R ++ R SS T Sbjct: 187 VRAGHPALTKRGRLSLPRFLAASHVMVSPTGRGQGIVDVVLAEQDEQRTVAVRVSSFATA 246 Query: 235 INSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFID 294 A +DL+ P L + L L + PLP + +++++ + + Sbjct: 247 PVVAASSDLILTAPASL-EAVVGHLGLVCVAPPLPLPEHSVDMTWHQRLSEDPGHQWLRE 305 Query: 295 RL 296 +L Sbjct: 306 QL 307 >UniRef50_C5BHM7 Transcriptional regulator, LysR family n=2 Tax=Edwardsiella RepID=C5BHM7_EDWI9 Length = 314 Score = 230 bits (586), Expect = 6e-59, Method: Composition-based stats. Identities = 99/302 (32%), Positives = 161/302 (53%), Gaps = 9/302 (2%) Query: 2 ANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSG 61 +NL LK FDLNLL +FE ++ H S+S+AA ++ TPSAVSQSLQ+LR F+DPLFIR+G Sbjct: 7 SNLLHLKGFDLNLLTVFEMVFLHNSVSRAAAAMGTTPSAVSQSLQKLRQHFDDPLFIRAG 66 Query: 62 KGIAPTTTGLNLHHHLEKNLRGLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 KGI+PT G+ LH + + L +E T+N ++ ++ F+++ P ++ + L Sbjct: 67 KGISPTALGVCLHDQIAQGLSLIENTLNATLSAKQRRKFVVFAPCCVALQVLPAAVSALE 126 Query: 122 Q----DSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLIC 177 + + + AE+LL RKAD+V + PV + +V C+P L+C Sbjct: 127 RLGVGYELLHYSEYADYHPHTIAEQLLNFRKADVVFSTTPVTAHAVHCLPFANEPLALVC 186 Query: 178 SNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINS 237 + HPR+ + + Q+ E F L D ++ R S ++I+ Sbjct: 187 RDGHPRLGEACSEVQLSGERFVIL---QRAHSDGDRFAFLHGG--RVVLRSDSFISILGV 241 Query: 238 IAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLN 297 ++ +DLL ++P E+ Y L+ ++ +P I LY++YNK SL N F +D L Sbjct: 242 VSHSDLLTVLPREVALRYGASFKLRVVETAFAIPPISLYLTYNKLSLRNPEFRNLLDVLM 301 Query: 298 ES 299 ++ Sbjct: 302 DT 303 >UniRef50_C4KB22 Transcriptional regulator, LysR family n=37 Tax=Betaproteobacteria RepID=C4KB22_THASP Length = 333 Score = 229 bits (585), Expect = 8e-59, Method: Composition-based stats. Identities = 56/301 (18%), Positives = 123/301 (40%), Gaps = 6/301 (1%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 L+ FDLNLL + +Y+ S+S+AAE L ++ VS +L RLR +PLFI++ G+ Sbjct: 22 MSLRDFDLNLLRVLLAVYEAGSVSRAAEHLGLSQPTVSSALGRLRRALGEPLFIKTASGV 81 Query: 65 APTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 PT L L LE + + ++ + N + + ++ +R Sbjct: 82 TPTARTHALASSARAMLARLETDFFVADRFDPAKYEGNLTVALSDVGELVFLPRILDSVR 141 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVIS-RSVICMPLHTIRNTLICSNR 180 + + + + + ++ + + DL I P + L R + Sbjct: 142 RLAPLAM-LDSVTLAPGELMRAMEDGEVDLAIGYYPDLDAAGFYREKLLDHRFVCLLRAD 200 Query: 181 HPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAV 240 HP + E+ ++ E + +K + + ++ + R+I R +++ I Sbjct: 201 HPVQDRQLSLERFLSLEHAAVRAKGRSQEIFEKYLERLRIQRRIVLRTPHFMSLPGIIGR 260 Query: 241 TDLLGIVPYELYNSYRDFLN-LKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNES 299 +DL+ +P+ + + + ++ + +P I+LY +++ ++ + Sbjct: 261 SDLVVTLPHAIGHYFTRVGEKVRMAEPPLAIPHIELYQHWHRGFHHDPRNRWLRTLVAGL 320 Query: 300 F 300 F Sbjct: 321 F 321 >UniRef50_Q2KYC5 LysR-family transcriptional regulator n=9 Tax=Burkholderiales RepID=Q2KYC5_BORA1 Length = 306 Score = 229 bits (583), Expect = 1e-58, Method: Composition-based stats. Identities = 61/298 (20%), Positives = 119/298 (39%), Gaps = 9/298 (3%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 L+K DLNLLV+F+ + + +IS A L ++ AVS +L+RLR F D LF+R+ +G+ P Sbjct: 10 LRKLDLNLLVVFQHLLEERNISAVARRLDLSQPAVSNALRRLRLAFGDELFVRTAQGMLP 69 Query: 67 TTTGLNLHHHLEKNLRGLEQ---TINIVNKSELKKNFIIYGPQLISCSNNSMLIR-CLRQ 122 T + + + L L + + ++ I L+ C R Sbjct: 70 TPLAEGMGGQVSEALSLLSHLADAAQPFDPATSQRRLRIAMSDAGEIHFMPTLMELCARH 129 Query: 123 DSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHP 182 V I+ + + L + DL + + ++ L + HP Sbjct: 130 VPGVRIDSLRCT----DLQRELDTGRVDLALGAFDGLGSGIVQRMLFRQGYATLFRAGHP 185 Query: 183 RITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTD 242 R + AE+ ++S++A I ++ + + F + ++ TD Sbjct: 186 RAYAGMSARAFRAEQHL-VVSRAAPDGQINQALERAGVVLQEQFSVPHFAAVPYIVSTTD 244 Query: 243 LLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 LL VP +L S L+ + L +P ++ + +++ + + ++F Sbjct: 245 LLATVPEKLAASAAPRFGLQVLTLPIKVPLLQTNLYWHRRFQRDGANQWLRGLIIDTF 302 >UniRef50_Q8XRG7 Probable transcriptional regulator transcription regulator protein n=1 Tax=Ralstonia solanacearum RepID=Q8XRG7_RALSO Length = 308 Score = 229 bits (583), Expect = 1e-58, Method: Composition-based stats. Identities = 61/295 (20%), Positives = 117/295 (39%), Gaps = 4/295 (1%) Query: 9 KFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTT 68 DLNLL +FE I++ +++ E L ++ AVS+ L RLR + D LF+R +G+ PT Sbjct: 13 HLDLNLLELFESIWRTRNLTATGERLGLSQPAVSRGLARLRETYGDELFVRHRRGVEPTA 72 Query: 69 TGLNLHHHLEKNLRGLEQTIN--IVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSV 126 L + L + +TI + +E + F + + L L + Sbjct: 73 FAQTLAEPVSAALAIVRRTIEKPTFSAAEDARRFRVALSDIGERYFLPRLAAWLADHAP- 131 Query: 127 EIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRITD 186 ++ + S E L + DL + +P + + V L + I HP I Sbjct: 132 QVSIDTVSASREELLTGLASGEIDLAVGFLPGLGKQVHEKRLFQEKFVYIARRDHPGIDG 191 Query: 187 NSTYEQIMAEEFTQLISKSAGV-DDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLG 245 Q+ A ++ + + ++ R S L+I +A +DL+ Sbjct: 192 RLQASQLRALPHVVGSPHGTQHAAAVEKVLTGPRVRAVVAMRVGSFLSIGPIVADSDLVA 251 Query: 246 IVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 +VP L + + L+ I PS ++ + +++ + + ++ F Sbjct: 252 VVPSNLAALVSEHVGLQLIAPPVRFPSFEVSMVWHRRFHGDPGGAWLRGVFSQLF 306 >UniRef50_B8E7T8 Transcriptional regulator, LysR family n=7 Tax=Shewanella RepID=B8E7T8_SHEB2 Length = 313 Score = 229 bits (583), Expect = 1e-58, Method: Composition-based stats. Identities = 65/295 (22%), Positives = 127/295 (43%), Gaps = 4/295 (1%) Query: 8 KKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPT 67 K DLNLL +F +Y+ S ++AAE L +T S+VS ++ R R + LF R G+GI PT Sbjct: 5 KPLDLNLLRVFMVVYRTRSFTQAAEELDLTQSSVSNAISRFRVWVGESLFNRVGRGIEPT 64 Query: 68 TTGLNLHHHLEKNLRGLEQTINIVNKSELK---KNFIIYGPQLISCSNNSMLIRCLRQDS 124 ++ E+ + +E + + K + F +Y + + + + ++ L QD+ Sbjct: 65 AVAREMYRKFEQPMADIETVLLGFEHFDPKCSQRRFYVYANESVIEALQTG-VQALLQDA 123 Query: 125 SVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRI 184 +E+ + + ++ + + I P + L T I S +HPRI Sbjct: 124 DIEVIFRESPPQEADLYRDILLERVAVAIDIKPAQQSLLSSKLLFTETLVCIVSRQHPRI 183 Query: 185 TDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLL 244 T+ Q E+ L + + + + RK+ SSLL++ ++ ++ + Sbjct: 184 QGAITHGQYFEEKHVFLNMRRFNLTAGDLFTEGVLPRRKMYSEQSSLLSMFATVGKSEAI 243 Query: 245 GIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNES 299 GI P + Y + ++ + + I LY+ ++ N L ++ Sbjct: 244 GIAPLRYASQYAELFGIQILPMPLKTRPIDLYMVWSSKYTQNPSHQWLRSLLLDA 298 >UniRef50_B7CP85 Transcriptional regulator, LysR family protein n=1 Tax=Burkholderia pseudomallei 576 RepID=B7CP85_BURPS Length = 305 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 61/301 (20%), Positives = 123/301 (40%), Gaps = 7/301 (2%) Query: 2 ANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSG 61 ++ ++ DLNLL+ + + +SKAA+ +++ A+S+ LQRLR F D L +R+ Sbjct: 1 MHMKHIRGADLNLLLAAFVLLEERQVSKAADRYHLSQPAMSRMLQRLRDTFGDELLVRTR 60 Query: 62 KGIAPTTTGLNLHHHLEKNLRGLEQTIN--IVNKSELKKNFIIYGPQLISCSNNSMLI-R 118 G PT G + H L + L L+ + + + +E + F + + L R Sbjct: 61 GGFEPTVRGRYILHELGELLPRLDALLRGGLFDPTEAEDTFRVACTDYATTILGPRLFER 120 Query: 119 CLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICS 178 R+ +V + D++ ++A E + H + DLV+ + ++ L + S Sbjct: 121 VFREAPNVSM---DVVAWHDHAFEAIEHGRLDLVLWPNE-VPDTLYSETLFEDDFVCMMS 176 Query: 179 NRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSI 238 + HP + + ++ + + + R R S I +I Sbjct: 177 SDHPSGDGPLVLRDYLRFPHAVVSVLGGKQTIVEQRLHDMGVRRAAGLRVSYFSGAITAI 236 Query: 239 AVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 A T L+ VP L YRD N++ ++ + + ++ + +L + Sbjct: 237 ARTALIATVPRRLAMLYRDRANIRIVEAPAMFGKLSYKMVWHPRADGDLALQWLRQTIRA 296 Query: 299 S 299 + Sbjct: 297 A 297 >UniRef50_B5ET44 Transcriptional regulator n=1 Tax=Vibrio fischeri MJ11 RepID=B5ET44_VIBFM Length = 301 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 71/292 (24%), Positives = 134/292 (45%), Gaps = 4/292 (1%) Query: 8 KKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPT 67 K FD+NLL +F + Q S +KA+E L +T S+VS +++RL+ + LF RSG+GI T Sbjct: 5 KDFDMNLLRVFVSVCQTGSFTKASEELELTQSSVSNAIRRLKKALGNELFTRSGRGIEMT 64 Query: 68 TTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDS 124 G + +E ++ L TI + +NFI+Y + + L R L + S Sbjct: 65 AFGKHFFEAVEPSVMSLVNTIGRDDRFEPLTSSRNFIVYALESVLPRLQIRL-RELLKGS 123 Query: 125 SVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRI 184 ++ + ++ + E + L+ K DLV+ M S+ + + I HPRI Sbjct: 124 NITVTLKELPSNEEETFDALMREKVDLVLDVMKPHQSSLKSVIVSEDAACCIARIGHPRI 183 Query: 185 TDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLL 244 T+EQ E+ L + ++ E R + +S+L ++ +A +D + Sbjct: 184 FGEMTHEQYFNEDHAFLNMRRVKQTIMEYLAKEELPKRTMGSEHTSMLGMMACVAQSDFV 243 Query: 245 GIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRL 296 G+ L + Y++ L+ + L + +++ ++ S +N + + Sbjct: 244 GVNSVRLVSQYKEQFKLQMLPLPFSTRTTSIHMIWSVKSQSNSANQWLRELI 295 >UniRef50_Q2G901 Transcriptional regulator, LysR family n=2 Tax=Alphaproteobacteria RepID=Q2G901_NOVAD Length = 302 Score = 228 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 65/297 (21%), Positives = 124/297 (41%), Gaps = 8/297 (2%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 K DLNLLV+F+ + + S+++AAE + +T A S +L+RLR F D + + GK + P Sbjct: 3 FKGLDLNLLVVFDALMETRSVTRAAERIGLTQPATSAALRRLRDYFRDEIVVAVGKRMHP 62 Query: 67 TTTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLI-RCLRQ 122 T LH +++ LR +E+ I++ + S + F I G I + LI R R Sbjct: 63 TPFAEALHPQIQQALRRVERAISMPTEFDPSTSTRRFRIIGSDYIMVAVLVPLIERFART 122 Query: 123 DSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHP 182 V IE I+ E++ L +ADL++T P ++ L ++ ++P Sbjct: 123 APGVRIE---IIQPNEHSVAELEAGRADLLVTPEPFLASWHPSEVLFDEEQVVVGWAQNP 179 Query: 183 RITDNSTYEQIMAEEFTQLI-SKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVT 241 T + A + + + R++ S + I T Sbjct: 180 IFARGVTADDFYAAGHVTVAFGANRTPAFADSALSRMGRERRVEVTVGSFASAPWFIEGT 239 Query: 242 DLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 L ++ L NL ++ P+++ + ++++ + + ++ E Sbjct: 240 SRLAVLHERLVRQIARRFNLAWARMPFDFPTMQEMMQFHEARAEDAGLAWLRQQMRE 296 >UniRef50_A1UXD8 Transcriptional regulator, LysR family n=41 Tax=cellular organisms RepID=A1UXD8_BURMS Length = 355 Score = 228 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 53/282 (18%), Positives = 108/282 (38%), Gaps = 3/282 (1%) Query: 17 IFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTTGLNLHHH 76 +F+ + Q ++S+AA L+++ AVS +L RLR Q +PLF R+ +G+ PT L+ Sbjct: 59 VFDALMQEQNLSRAAIRLHMSQPAVSNALTRLRQQLGEPLFTRTARGMTPTAQARTLYEP 118 Query: 77 LEKNLRGLEQTINIVNKSELKKN--FIIYGPQLISCSNNSMLIRCLRQDSSVEIECHDIL 134 + + L L+ + E + F + L+ ++ + + Sbjct: 119 VRQALYLLQIGLGPQADFEPDTHHLFKLSMNDYGQTVLLPDLLAHIKSRAP-NVMLSVQS 177 Query: 135 MSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRITDNSTYEQIM 194 A + L DL I + + + PLH +I HP Sbjct: 178 DDAGSIPAQLTTGTLDLAIDYLHFDNPELCYEPLHEEHLVVIGRAGHPAFAGGLALRGYE 237 Query: 195 AEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLGIVPYELYNS 254 + + +++ + + R + + LTI +A +DLLG +P L Sbjct: 238 ESGHVSIQPRDRRGSPLEIVLGSARVRRVVHLQVPHYLTIPALVAKSDLLGTIPRRLAER 297 Query: 255 YRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRL 296 + D L+ L + I++ + +++ +++ Sbjct: 298 FADVYALQIAPLPIDIAPIQVSLIWHRQQDAQPGLRWLREQV 339 >UniRef50_Q15TE0 Transcriptional regulator, LysR family n=4 Tax=Alteromonadales RepID=Q15TE0_PSEA6 Length = 307 Score = 227 bits (580), Expect = 3e-58, Method: Composition-based stats. Identities = 61/292 (20%), Positives = 131/292 (44%), Gaps = 5/292 (1%) Query: 8 KKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPT 67 K DLNL +I +YQ SI+ A + L+++ AVS +L RLR ++ DPLF+R G+ + T Sbjct: 6 SKIDLNLFLILVAVYQEGSITGAGKRLHLSQPAVSHALSRLRDKYQDPLFVRHGRKMIAT 65 Query: 68 TTGLNLHHHLEKNLRGLEQTINIVNKSEL---KKNFIIYGPQLISCSNNSMLIRCLRQDS 124 + + ++ LE T++ + ++ ++ ++ L L ++ Sbjct: 66 QLCQTIMPRVLSSVAELESTLHDIGDFDVHQYQREMKFGFRDILESIFFPELATDLMANT 125 Query: 125 SVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRI 184 I H +S + E L + D+VI + S + + +LIC HP + Sbjct: 126 P-NITVHSRQVSRLDMEAALESQALDIVIDVLTPTSNDIHHTLICDEHFSLICRKGHPIL 184 Query: 185 TDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLL 244 +D + + E + K + V+ + M + + + RK + + + I+ D+L Sbjct: 185 SD-MSLANYIKAEHALVTFKDSAVNTVDMALAKHAVARKFALKCEHYFAATSVISRCDML 243 Query: 245 GIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRL 296 +P + + ++ + L +P + +++ ++K + ++ + S +L Sbjct: 244 LTMPNAYARLLKQQMPVEVVPLPFEVPILPVHMYWHKQAEHDPLNSWMRQKL 295 >UniRef50_A9C385 Transcriptional regulator, LysR family n=2 Tax=cellular organisms RepID=A9C385_DELAS Length = 332 Score = 227 bits (580), Expect = 3e-58, Method: Composition-based stats. Identities = 67/298 (22%), Positives = 129/298 (43%), Gaps = 6/298 (2%) Query: 6 DLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIA 65 +L+ DLNLLVIFE + + S+ KAA L IT SAVS +L+RLR QFNDPL +R+ +G++ Sbjct: 16 NLRSIDLNLLVIFEALVEERSVGKAAARLGITSSAVSHALRRLRTQFNDPLLLRTAEGMS 75 Query: 66 PTTTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCLRQ 122 PT + L K +E I + + + ++NF + + L LR Sbjct: 76 PTPEAVRLARSFRKAFSEIESAIEVSKGFDPATARRNFHLRLSDYVGVLLLPQLCIHLRA 135 Query: 123 DSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHP 182 + I + + + ++ ++ S L + ++ HP Sbjct: 136 VAP-GISLSVQSFDGRQPSDRVEYEGVEIRLSVSRGRSVLSASRRLLDDQWMVLMRKDHP 194 Query: 183 RITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTD 242 T E+ + + ++ G + + ER + R++ F+ + L ++ I TD Sbjct: 195 AAASPLTLEKYLEQGHLKVT--GVGSSIVDELLAERGLARRVMFQVPTWLGMVPVIESTD 252 Query: 243 LLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 L+ +P +S N + P ++ + ++ + ++ F + +++ F Sbjct: 253 LVAAMPAHWMHSVLSGSNCVARPMPLPELALSIDAVWHPRNDHDAGHKWFRELIHQIF 310 >UniRef50_P46924 Probable HTH-type transcriptional regulator leuO n=122 Tax=Gammaproteobacteria RepID=LEUO_SALTY Length = 314 Score = 227 bits (580), Expect = 3e-58, Method: Composition-based stats. Identities = 67/292 (22%), Positives = 136/292 (46%), Gaps = 4/292 (1%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 L+ DLNLL +F+ + Q +I++AA +L ++ AVS ++ RL+ FND LF+R G+GI P Sbjct: 19 LRMVDLNLLTVFDAVMQEQNITRAAHTLGMSQPAVSNAVARLKVMFNDELFVRYGRGIQP 78 Query: 67 TTTGLNLHHHLEKNLRGLEQTI--NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDS 124 T L + + L+ ++ + + + ++ F + + S + + + + Sbjct: 79 TARAFQLFGSVRQALQLVQNELPGSGFEPTSSERVFNLCVCSPLDNILTSQIYNRVEKIA 138 Query: 125 SVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRI 184 I +N E L +++ + VI+ +PL L+ S +HPRI Sbjct: 139 P-NIHVVFKASLNQNTEHQLRYQETEFVISYEEFRRPEFTSVPLFKDEMVLVASRKHPRI 197 Query: 185 TDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLL 244 + + E+ ++S Q D ++++G +L++++N ++ T L+ Sbjct: 198 SGPLLEGDVYNEQHA-VVSLDRYASFSQPWYDTPDKQSSVAYQGMALISVLNVVSQTHLV 256 Query: 245 GIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRL 296 I P L + + L+L+ + L L S Y+S+++++ + D L Sbjct: 257 AIAPRWLAEEFAESLDLQILPLPLKLNSRTCYLSWHEAAGRDKGHQWMEDLL 308 >UniRef50_A6V8B0 Transcriptional regulator, LysR family n=10 Tax=Proteobacteria RepID=A6V8B0_PSEA7 Length = 310 Score = 227 bits (578), Expect = 4e-58, Method: Composition-based stats. Identities = 65/296 (21%), Positives = 125/296 (42%), Gaps = 9/296 (3%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 L + DLNL +FE +Y+ ++++AA L+++ SAVS +L RLR Q DPLF+R G+G+AP Sbjct: 10 LSRLDLNLFRVFEVVYRERNLTRAAALLHLSQSAVSHALARLREQLGDPLFVRQGRGVAP 69 Query: 67 TTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQ- 122 T L + L GL++++ + + F++ P+ + + LRQ Sbjct: 70 TPLAERLAPGIRDALAGLQRSVARCQSFDPRHDARTFLLNMPEQLEPLVLPDFLGHLRQV 129 Query: 123 DSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHP 182 VE+ C + + E L + D + ++ PL R ++ P Sbjct: 130 APQVEVRCSSLHWAELKTE--LEAGRIDAAVEVARPTDAALRRQPLLEDRLWVMAG---P 184 Query: 183 RITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTD 242 + E+ +A + S+ G+ + + + + RK+ R L+ +A Sbjct: 185 EFAGELSAERYLAAAHVAVTSRRRGICIEDLALGQLGLTRKVRQRCQHYLSAALLVAQGG 244 Query: 243 LLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 L + L + + + LP++ L + +++ + L E Sbjct: 245 YLLTLTRRYAELLNRGLGNRLLPMPLALPAVALNLYWSRQADAEPGGRWLRGELME 300 >UniRef50_Q13GK2 Transcriptional regulator, LysR family n=1 Tax=Burkholderia xenovorans LB400 RepID=Q13GK2_BURXL Length = 311 Score = 226 bits (577), Expect = 6e-58, Method: Composition-based stats. Identities = 57/304 (18%), Positives = 123/304 (40%), Gaps = 5/304 (1%) Query: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 M + D+ LL++F+ + + S+S+AA+ + +T SAVSQ L RLR F+DPLFIR+ Sbjct: 1 MRRNPRVDTLDIKLLLVFDALLRERSVSRAADDVGLTQSAVSQKLGRLRDIFSDPLFIRT 60 Query: 61 GKGIAPTTTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLI 117 G+ PT L L L + L + ++ + ++NF + +S ++ Sbjct: 61 ANGMEPTPHALVLSAQLAELLARWKSLVSSQQRFEPATAERNFRVALSDGMSYHCLPPVV 120 Query: 118 RCLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLIC 177 R +R+ + + + + + + ADL + + L + Sbjct: 121 RRIREIAP-NLRITIVHVGPRGGQREIESGSADLALGVFQQPPIGISTCELFRYTLQCVA 179 Query: 178 SNRHPRI-TDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIIN 236 +PR+ + ++ + + + +++ ++ + RKI+ ++I N Sbjct: 180 DKNNPRLKQGTMSRDEYLEASHIAVGENNVPGTLVEVIVEALGLKRKIALVTPHFVSIPN 239 Query: 237 SIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRL 296 + TDL+G P ++Y L + P+ ++ + + Sbjct: 240 LVLGTDLIGTFPSSAQDAYPFSNQLCFFPIPFPISESIAMAMWHPRFDGDPGHMWLRNLF 299 Query: 297 NESF 300 ++ Sbjct: 300 ADTL 303 >UniRef50_Q08NF6 Transcriptional Regulator, LysR family n=1 Tax=Stigmatella aurantiaca DW4/3-1 RepID=Q08NF6_STIAU Length = 322 Score = 226 bits (577), Expect = 6e-58, Method: Composition-based stats. Identities = 52/291 (17%), Positives = 115/291 (39%), Gaps = 6/291 (2%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 L D NLLV+ + + Q + +A++ + ++PSA S +L RLR D L +R+G+ + Sbjct: 15 LSSIDTNLLVVLDALLQEGHVGRASKRVALSPSATSHALARLRELLGDELLVRAGRQLVL 74 Query: 67 TTTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCLRQD 123 T + L + + + +E+ + + ++L+ F + I L R L + Sbjct: 75 TPRAIALAPQVRQLMEQMERILRPAESFHPAKLEHTFRVLTTDHIEFVLLRPLDRFLTDE 134 Query: 124 SSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPR 183 + + H+ M + EE L +ADL + + L R + HP Sbjct: 135 AP-RVILHNRPMVPDAVEE-LRGGRADLAFGVFTDLPDDISSQELFKDRFVTLVREGHPV 192 Query: 184 ITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDL 243 + T ++ + + + + + + ER + R++ S L+ +A +D Sbjct: 193 LARPLTLKRFAELDHVLVAPRGTATSRMDLLLAERNLKRRVVRTLGSFLSAPFFVAQSDH 252 Query: 244 LGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFID 294 + + ++ L L+ ++ L +++ + + Sbjct: 253 AVTLSARIADALAPLLGLRVLEPPIAY-EYTLTQIWHRRWDADPAHAWLRQ 302 >UniRef50_Q9FD34 PnbR n=2 Tax=Pseudomonas RepID=Q9FD34_PSEPU Length = 348 Score = 226 bits (576), Expect = 9e-58, Method: Composition-based stats. Identities = 64/321 (19%), Positives = 129/321 (40%), Gaps = 26/321 (8%) Query: 4 LYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKG 63 + K DLNL+ +F+ + + S+ +A++ L+++ SAVS +L RLR +F+R+GKG Sbjct: 20 MIAFDKLDLNLIRVFDAVMEERSVLRASQRLHLSQSAVSHALSRLREGLGQEIFVRTGKG 79 Query: 64 IAPTTTGLNLHHHLEKNL----RGLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRC 119 ++PT+ L + L L + L Q + + ++F+I +S + L Sbjct: 80 MSPTSYALEISGALHAALLSMSKALSQAATPFSPQSVCRSFVIAANDYVSATLLPQLNHQ 139 Query: 120 LRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSN 179 L + + I+ + + E + + D+ I + P+ ICS Sbjct: 140 LSKVAP-GIDLQITPATRLDLAEQIDLGRIDVAIGTFRSVPERFRTKPVLFQDEVFICSG 198 Query: 180 RHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFR------------ 227 HP + + ++ + G + I ER + R+ Sbjct: 199 THPISANKPQLQDLVRYPLAVVSLGGEGEGMLSGYILERGLARQAQMYDRTALEQALNEA 258 Query: 228 ---------GSSLLTIINSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYIS 278 L + + ++LL IVP L ++ L K L +P +L + Sbjct: 259 GLSMRRQIVLPHFLALPMLLEGSELLAIVPQPLARTFARTLGFKIKPLPYPAARQQLDLI 318 Query: 279 YNKSSLNNLVFSRFIDRLNES 299 ++ S+ N+ ++++E+ Sbjct: 319 WHSSNDNDPAQLWLHEQISEA 339 >UniRef50_C6BS61 Transcriptional regulator, LysR family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BS61_DESAD Length = 310 Score = 225 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 62/296 (20%), Positives = 125/296 (42%), Gaps = 4/296 (1%) Query: 6 DLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIA 65 + DLNLLVI + I+ S++ A L++T SAVS +L +LR F+D LF+R G + Sbjct: 5 NSSNLDLNLLVILDTIFTERSLTLAGNKLFMTQSAVSHALSKLRHHFDDRLFVRRGNIME 64 Query: 66 PTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQ 122 PT +H ++ +L+ + Q++ + + K+ F + + ++R + Sbjct: 65 PTPLCKTIHQNIAPSLKAINQSLADRGEFDPASSKRTFSLGLSDYLCKLLLPEILRLIDS 124 Query: 123 DSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHP 182 + + I + + E EE+L K D+ + V+ L R + N HP Sbjct: 125 RA-LGISIRIMQTTYEKREEMLQSGKLDVFLGCPRNYGAGVLKEKLFEDREVCVVRNDHP 183 Query: 183 RITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTD 242 + E++ EF L +G+ ++ + + + RKI I + + ++ Sbjct: 184 IKGEVMNEEEMAENEFAALSLSESGLGFLEDYLYRKGVQRKIKIVLQQETVIPSLVENSN 243 Query: 243 LLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 L+G + L Y L+ + + ++ ++ + N+ + E Sbjct: 244 LVGSIAQRLAEMYAAKGRLRIVHMPLENTEFEVSQHWHSLNDNDPAQQWIRSVIKE 299 >UniRef50_Q5LN55 Transcriptional regulator, LysR family n=4 Tax=Rhodobacterales RepID=Q5LN55_SILPO Length = 331 Score = 225 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 55/302 (18%), Positives = 112/302 (37%), Gaps = 11/302 (3%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 + + FDLNLL + + + S ++A + L ++ AVS +L RLR DPLFIR G+ + Sbjct: 1 MNFRTFDLNLLRVLDALLSTRSTTRAGQQLGMSQPAVSAALSRLRHALGDPLFIRQGRQL 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTIN---IVNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 PT LH L L E + + + + G + L R L Sbjct: 61 VPTDYAGGLHAPLRDLLGQTEALLAGQPDFDPGAATDSLTLSGSDFYAELLMPRLARHLS 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 + + + + +N + + D+ I V LH+ + H Sbjct: 121 HVAP-GMRVQLVDLVPDNYVQSVGQSAVDMAILPATPTPDWVEERRLHSSHFLAVARADH 179 Query: 182 PRITDN-------STYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTI 234 P I + + + + + R+++ + Sbjct: 180 PEIASAAIAPGAVLPLDLFCSLQHALFSPEGKLHGLGDAALARIGRARQVTMTLPVFSGV 239 Query: 235 INSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFID 294 +N+++ +DL+ ++P++L S L L P+ +++ + ++K + D Sbjct: 240 LNAVSQSDLIALIPHQLAESVAPRLGLSLYHPPIPVGPVEIMMVWHKRASTAPAHRWLRD 299 Query: 295 RL 296 ++ Sbjct: 300 QI 301 >UniRef50_A0JW61 Transcriptional regulator, LysR family n=1 Tax=Arthrobacter sp. FB24 RepID=A0JW61_ARTS2 Length = 295 Score = 225 bits (574), Expect = 1e-57, Method: Composition-based stats. Identities = 67/297 (22%), Positives = 123/297 (41%), Gaps = 6/297 (2%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 + DLNL+ F IY+ S+++ A + IT +VS +L RLR Q DPLF R G+ P Sbjct: 1 MADLDLNLVKTFVSIYETRSLTQTAAEMCITQPSVSHALSRLRRQLGDPLFTRGAGGMTP 60 Query: 67 TTTGLNLHHHLEKNLRGLEQTIN---IVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQD 123 T + L + +L ++ I+ + + + F + L + L++ L D Sbjct: 61 TRVAVELFSTFKASLNAIDLAIDGTRDFDPTTSSRTFRLCLSDLGEMAFLPALMKRLL-D 119 Query: 124 SSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPR 183 S+ +I + M + E L H D I +P I ++ + + + Sbjct: 120 SAPQIVLEVVPMQIDKVSEWLAHGAVDAAIASVP-IGGAIRSRVIDQEHYVCVLPDGAGG 178 Query: 184 ITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDL 243 + + T Q +I SAG + EI + R I+ R + +A +L Sbjct: 179 LAEKMTLSQFTGMRHV-VIDPSAGHHLAEAEIAALGIERNIALRLHHFSVLPLVLAGQNL 237 Query: 244 LGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 IVP + + + L +L +PS + + +N ++ + F + + +S Sbjct: 238 AAIVPSRVARMFTEQAPLTIRELPFNVPSFDVSLYWNGTAPRSRALRWFHETVADSL 294 >UniRef50_Q89IY7 Transcriptional regulatory protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89IY7_BRAJA Length = 307 Score = 225 bits (574), Expect = 1e-57, Method: Composition-based stats. Identities = 57/300 (19%), Positives = 117/300 (39%), Gaps = 7/300 (2%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 + DLNLL +FE + S+++AA +L +T AVS +L RLR DPLF+RSG GI P Sbjct: 5 FRALDLNLLKVFEALMTEGSVTRAASALTMTQPAVSNALARLRDALGDPLFVRSGTGIRP 64 Query: 67 TTTGLNLHHHLEKNLRGLEQTIN--IVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDS 124 T + L + + L + ++ + + + + F + +S L+ L + + Sbjct: 65 TQRAVVLWEPIGEALESVRGALDEQVFDPARAQTEFSLSMSDYVSSLVMPDLLGHLGKVA 124 Query: 125 SVEIECHDILMSAENAEELLVHRKADLVIT---QMPVISRSVICMPLHTIRNTLICSNRH 181 + H + + + L + D V++ ++ L T+ H Sbjct: 125 P-KARVHTVPNTILEIADQLEDNRVDCVMSVYVNEAQQPAAIRSRSLWTVDYACFMRRGH 183 Query: 182 PRIT-DNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAV 240 P + + + + + + R ++R + + + Sbjct: 184 PLAGMKRLSTRTFLNAGHVDVSLAGKTMPSYDLFLASRGLSRNLVATVNHYSAAYEVVRQ 243 Query: 241 TDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 +DL+ ++P +L + R L + L P + + +++ + + L E F Sbjct: 244 SDLIAVLPSDLRSQSRHAPLLHAMPLPLQAPPRIVSLFWHQRNDTVPAQRWLRETLVEMF 303 >UniRef50_Q5E2I6 DNA-binding transcriptional activator n=65 Tax=Gammaproteobacteria RepID=Q5E2I6_VIBF1 Length = 323 Score = 225 bits (574), Expect = 1e-57, Method: Composition-based stats. Identities = 63/293 (21%), Positives = 130/293 (44%), Gaps = 5/293 (1%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 L+ DLNLL +F+ + Q +I++AA++L ++ AVS ++ RL+ FND LFIR G+GI P Sbjct: 18 LRGVDLNLLTVFDAVMQEQNITRAAQNLGMSQPAVSNAVSRLKLMFNDELFIRHGRGIQP 77 Query: 67 TTTGLNLHHHLEKNLRGLEQTI--NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDS 124 T L + + L+ ++ + + + + F + +++ + Q+ Sbjct: 78 TQRARQLFAPMRQALQLVKNELPSSTFSPETSMRQFKLSICSPSDIRFAPRIMKDI-QNK 136 Query: 125 SVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRI 184 + I + + L +++ D VI + + L T ++ S HPR+ Sbjct: 137 APHISLKLSGEHEPDIAQKLRYQEVDFVIDYVRFDEPGFMSTELFTDELVVVASVNHPRL 196 Query: 185 TDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLL 244 + EQ+ +E+ + + + +++G+S+ I+ ++ ++L+ Sbjct: 197 QNGINKEQLASEKHAVPARIANTKGFADHLYVDSLYEQ--AYKGASISNILYVVSQSELI 254 Query: 245 GIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLN 297 + P L NS + L + L I Y+S++ S + D+L Sbjct: 255 TVAPKWLVNSMPNRDQLMVLPLPIESKGISGYLSWHDSYQKDKGHIWMRDQLM 307 >UniRef50_A8IJ97 Putative transcriptional regulator n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8IJ97_AZOC5 Length = 324 Score = 225 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 60/298 (20%), Positives = 114/298 (38%), Gaps = 6/298 (2%) Query: 3 NLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGK 62 +L +++FD LL++F + + AA L +T S VS +L+RLR DPLF R Sbjct: 4 DLNHIRRFDGALLLVFRELMATGQTTAAARRLGLTQSTVSHALRRLRDLTGDPLFQRRPD 63 Query: 63 GIAPTTTGLNLHHHLEKNLR---GLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRC 119 G+ PT L + + LR L+ + + ++F I GP ++S L Sbjct: 64 GLTPTPRAHELLPIVVEMLRLSQALKGEPGEFDPAASTRHFRIAGPDIVSTVLAGPLAHR 123 Query: 120 LRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSN 179 Q + + A E L + D+ I P + R L I Sbjct: 124 FAQHAP-NARLSFGFIVGAAALEALRRGEIDMAIGHFPSVPRGFAASTLWEEEFVAIARK 182 Query: 180 RHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIA 239 HPR +A + + + + + R++ L++ +++A Sbjct: 183 GHPRFP-PLDLAGYLAADHVLVSFSGRFTGVVDRVLQPLGLARRVVASFPLFLSVFDAVA 241 Query: 240 VTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLN 297 +D + VPY L + + L + + +P + +S ++ + + + + Sbjct: 242 QSDAVAAVPYSLCERHAETFGLARLPMPIAVPGFPI-VSVRRAGVPDGGYEWLEALIR 298 >UniRef50_A9FB16 Transcriptional regulator, LysR family n=3 Tax=Sorangium cellulosum RepID=A9FB16_SORC5 Length = 349 Score = 224 bits (572), Expect = 2e-57, Method: Composition-based stats. Identities = 56/301 (18%), Positives = 110/301 (36%), Gaps = 7/301 (2%) Query: 3 NLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGK 62 + L D +L+V + Q S+++AA + +T ++S +L RLRA F DPL ++ G+ Sbjct: 39 STMRLPSVDTHLVVALHALLQERSVTRAARRVGVTQPSMSHALSRLRAHFGDPLLVQVGR 98 Query: 63 GIAPTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRC 119 + + +L + + LEQ + + F + + L R Sbjct: 99 QMTLSERARDLLPRAAEAVERLEQVFGQAERFDPRRSTRTFRLVATDNLELLVLPPLTRI 158 Query: 120 LR-QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICS 178 L + V + C +I + ELL + D + + + L + + Sbjct: 159 LAAEAPHVNLRCRNIP---PDFAELLRRGELDAKLGRGGPVPDGCRSTQLAAEQLVCLMR 215 Query: 179 NRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSI 238 HP T + A E + + I E+ R + R+++ S L + Sbjct: 216 RGHPASRKALTAARYAACEHLMISPHGEDHNVIDQELAARGLRRRVTLTVSHFLVAPFIL 275 Query: 239 AVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 + +DLL V + + L+L L + + + S + S + Sbjct: 276 SGSDLLLTVSARVAVALARKLDLVVRPCPLEARGYTLTLVWPERSEGDEGHSWLRAAIER 335 Query: 299 S 299 + Sbjct: 336 A 336 >UniRef50_Q1LD16 Transcriptional regulator, LysR family n=8 Tax=Proteobacteria RepID=Q1LD16_RALME Length = 315 Score = 224 bits (572), Expect = 2e-57, Method: Composition-based stats. Identities = 57/302 (18%), Positives = 113/302 (37%), Gaps = 8/302 (2%) Query: 3 NLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIR--S 60 ++ D K DLNLLV + + +++ AE L +T AVS L RLR F+DPL I + Sbjct: 8 SVVDFKGVDLNLLVTLDALLDERNVTHTAERLGLTQPAVSAQLARLRRIFDDPLLIPADT 67 Query: 61 GKGIAPTTTGLNLHHHLEKNLRGLEQTIN---IVNKSELKKNFIIYGPQLISCSNNSMLI 117 G+G+ + L L L L+ LE ++ + + F+I + + L+ Sbjct: 68 GRGMIASARALALLEPLHVALKDLESVVHRRPEFDPFVDTRQFVIAASDNATSTLGMSLL 127 Query: 118 RCLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLIC 177 L + + + L + DL+I ++ ++ L + Sbjct: 128 ERLSIVAGTGVRVAFVHGRQAEIAAQLESGEVDLLIGSERMVPPTMRARKLLDETFVMAQ 187 Query: 178 SNRHPRITDNSTYEQIMAEEFTQLISKSAG-VDDIQMEIDERFMNRKISFRGSSLLTIIN 236 HPR T + + + + ++ +R ++ + + + Sbjct: 188 RKSHPRGARRLTLDMYCKLRHVLVSTSGGSFFGFVDEQLQLLGRSRDVAVSVQAFTVVPD 247 Query: 237 SIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRL 296 + +D + +P L Y D+ L L +P L +++ + + + L Sbjct: 248 LLRRSDYVCTMPARLAARYADW--LDAFALPFDVPGFSLSAAWHPRNHADPAIAWLRSTL 305 Query: 297 NE 298 E Sbjct: 306 AE 307 >UniRef50_Q391Q9 Transcriptional regulator, LysR family n=1 Tax=Burkholderia sp. 383 RepID=Q391Q9_BURS3 Length = 322 Score = 224 bits (572), Expect = 3e-57, Method: Composition-based stats. Identities = 54/305 (17%), Positives = 113/305 (37%), Gaps = 8/305 (2%) Query: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 M +++ ++ DLNLL +F + ++++AAE L ++ SAVS +L+RLR D LF ++ Sbjct: 1 MKDVF--RQLDLNLLRVFAALMAEGNVTRAAERLALSQSAVSNALRRLRESLGDVLFEKT 58 Query: 61 GKGIAPTTTGLNLHHHLEKNLRGLEQTI--NIVNKSELKKNFIIYGPQLISCSNNSMLIR 118 G+ PT L ++ + L+Q I + + E + F I L Sbjct: 59 VSGVRPTARARELWSAVQPHFDALKQAISPDQFDPQEHRGTFTIAMSDYSVERIMPRLAH 118 Query: 119 CLRQDSSVEIECHDILMSAENAEELLVHRKADLVIT---QMPVISRSVICMPLHTIRNTL 175 + + + + S + + DL I S V + I + Sbjct: 119 FMGEHAP-SMRIELTPFSVADLPAMFDRGGVDLAIGGYLNDSSPSSGVRTHEMWPIHWSC 177 Query: 176 ICSNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTII 235 + HP T ++ +A + V + + R + ++ + Sbjct: 178 LMRKDHPLAKGPLTLKRFLAARHLDVGFSGMRVPVYDSLLSAHGLQRNLVLTLNAYSPAL 237 Query: 236 NSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDR 295 I +D +G++P L + L + +P+ + +++ ++ Sbjct: 238 AIIRESDFIGVLPTTLLDLSIHEKELVSRQPPVRMPARPYCVIWHQRWDSHPAHRWLRQT 297 Query: 296 LNESF 300 + F Sbjct: 298 IVSLF 302 >UniRef50_A9FJR3 Transcriptional regulator, LysR family n=2 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FJR3_SORC5 Length = 306 Score = 224 bits (571), Expect = 3e-57, Method: Composition-based stats. Identities = 55/297 (18%), Positives = 117/297 (39%), Gaps = 3/297 (1%) Query: 4 LYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKG 63 L L+ DLNLL + + + ++++AAE L +T AVS +L RLR FND L +R GK Sbjct: 6 LPRLRAVDLNLLTVLDAVLTERNVTRAAERLGMTQPAVSSALNRLRLLFNDDLIVRRGKE 65 Query: 64 IAPTTTGLNLHHHLEKNLRGLEQTINIVNKSE--LKKNFIIYGPQLISCSNNSMLIRCLR 121 +APT L L + K L ++ ++ + + F + + ++ L Sbjct: 66 MAPTPRALALAGPIRKALDLIQASLAHTGAFDCTASRTFRLGITDIGEALLLPRFLQWLE 125 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 Q + + + + K +LV+ + + + + + H Sbjct: 126 Q-LGARVRLDFCREPGTSLQNEMRLGKIELVLDHIAIPGEEFRRTRVLDLEFVTLVRQDH 184 Query: 182 PRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVT 241 P + + T ++ MA E + + + + R + + L++ ++ + Sbjct: 185 PTVGPSLTLDEYMALEHVIIEPREGQTNLAEQIQAAVGRARCVRVQVPRYLSMPFIVSQS 244 Query: 242 DLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 +L+ +P L + ++ + P+ I L++ ++ + L E Sbjct: 245 NLVCTLPLPLARLFEQHFPVRVVSCPLPIQPIPLFMMWHACQDGDPAHEWLRRSLIE 301 >UniRef50_Q5DZ29 Transcriptional regulator, LysR family n=2 Tax=Vibrio fischeri RepID=Q5DZ29_VIBF1 Length = 287 Score = 224 bits (571), Expect = 3e-57, Method: Composition-based stats. Identities = 66/291 (22%), Positives = 117/291 (40%), Gaps = 16/291 (5%) Query: 10 FDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTT 69 DLNL+ F +YQ S +KA+E L +T AVS +++RL ++ LFI+ G+GI T+ Sbjct: 1 MDLNLVRTFMAVYQCQSYTKASELLMLTQPAVSAAIKRLESEIGKQLFIKKGRGIEATSK 60 Query: 70 GLNLHHHLEKNLRGLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSVEIE 129 L + L + +N K +Y ++I S + +I Sbjct: 61 AHALATKFQFALDTINDAVND------KNTLSVYCAEIILHSLVGL----------EQIN 104 Query: 130 CHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRITDNST 189 + S E L +K DLV+ + + + + ++C+ HPRI T Sbjct: 105 FAESPRSQSMLFEHLREQKVDLVLDVATMKDSAFVIEDAYVEPLVVVCAKNHPRIQGELT 164 Query: 190 YEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLGIVPY 249 E + G++ + E R I+ SSL +++ ++ D LG+V Sbjct: 165 KVDYYRESHVIYSALWQGMNGFEQIAQEPVEERNIALTVSSLSSVLMFVSQGDSLGLVSQ 224 Query: 250 ELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 + LNL L + K Y+K +N+ + ++ + Sbjct: 225 SFAKRWEKQLNLAIYPCPVKLDNAKYKFIYHKRYINDPQHRKVRQQIIDKL 275 >UniRef50_Q687Z9 LysR-type activator n=1 Tax=Sphingopyxis macrogoltabida RepID=Q687Z9_9SPHN Length = 318 Score = 224 bits (570), Expect = 4e-57, Method: Composition-based stats. Identities = 54/289 (18%), Positives = 111/289 (38%), Gaps = 3/289 (1%) Query: 15 LVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTTGLNLH 74 L IF + +S AAE+L IT VS +L+RLR +D LF R+ G+ PT + + Sbjct: 25 LRIFHRMMVDRKVSAAAEALGITQPGVSNALKRLRDITDDELFTRAPGGMEPTAFAIQIA 84 Query: 75 HHLEKNLRGLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDS--SVEIECHD 132 + L ++ + + ++ L +L + L + + + + Sbjct: 85 EPISYALAMVDAAFTQPTDFKPASDRRLFRLGLTDIGEAYLLPKILARTAEIAPHVSFTT 144 Query: 133 ILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRITD-NSTYE 191 I E + DL I P + + + L ++ + HP T Sbjct: 145 IRPPKSEIREEMEVGSLDLAIDVFPNMKGNFVHRRLLKEKHVICMRKDHPLANKAEWTMA 204 Query: 192 QIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLGIVPYEL 251 +A+E +I++ G DI + + ++R I L++ + T+L+ +P + Sbjct: 205 DYIAQEHVVVIAQGTGHGDIDALLARKGISRNIRLMLPHFLSLGPVMHATNLVATLPEDA 264 Query: 252 YNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 + L + LP + + + +++ + + + E F Sbjct: 265 ALLLEEPYELISLPFPGILPIVHVDVFWHRRLHRDPANVWLRNLVYELF 313 >UniRef50_Q486J0 Transcriptional regulator, LysR family n=4 Tax=Gammaproteobacteria RepID=Q486J0_COLP3 Length = 306 Score = 224 bits (570), Expect = 4e-57, Method: Composition-based stats. Identities = 70/299 (23%), Positives = 137/299 (45%), Gaps = 8/299 (2%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 +K D +L+ F I + S +KAA+ L I+ SAVSQ + RL+A F D LFIR +G+ P Sbjct: 1 MKHSDYSLIPTFVAIVEEKSYTKAAKRLGISQSAVSQGVTRLQAVFKDTLFIRGSRGVEP 60 Query: 67 TTTGLNLHHHLEKNLRGLEQTINIVNKSEL---KKNFIIYGPQLISCSNNSMLIRCLRQD 123 T L+++ L ++ + + K +K F+I + + L + Q Sbjct: 61 TQFSLDIYPTLASSVENIAFMMPEYKKFSAVKCEKQFVISSLSVFGFTILPPLSALMSQH 120 Query: 124 SSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPR 183 + + ++ + +L + DLVI + + ++C HPR Sbjct: 121 APLA-SVKIEPLNNHDFTNMLRSQHFDLVIDAHSNQYPQLRSKVIMEDTLCVMCRIDHPR 179 Query: 184 I-TDNSTYEQIMAEEFT---QLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIA 239 + D+ + ++ +AE+ QL K + ++ DE RKI+++ +S++ ++ I Sbjct: 180 LSGDSISIDEFLAEKHVTHSQLDQKGGYLSGKGLKEDEILNQRKIAWQAASIMEMLPVIE 239 Query: 240 VTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 D + ++P L + YR LK++ L IK+ + ++ S N+ +++ + Sbjct: 240 CCDYIALLPQRLVDKYRHIYQLKQLHSNFLLDPIKVAMYWHSSRTNDPSHKWLREQIVK 298 >UniRef50_A5F4D9 Transcriptional regulator, LysR family n=68 Tax=Gammaproteobacteria RepID=A5F4D9_VIBC3 Length = 327 Score = 224 bits (570), Expect = 4e-57, Method: Composition-based stats. Identities = 57/310 (18%), Positives = 111/310 (35%), Gaps = 16/310 (5%) Query: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 + + L + DLNLLV + + + LS+++AA L ++ SAVS+SL +LR QF+DPLF+R+ Sbjct: 14 LMQIEKLARIDLNLLVCLKVLIEELSVTRAAARLCLSQSAVSKSLAKLREQFDDPLFVRT 73 Query: 61 GKGIAPTTTGLNLHHHLEKNLRGLEQTINI--VNKSELKKNFIIYGPQLISCSNNS-MLI 117 G+ T L L L+ + LE + + F I + + L Sbjct: 74 SYGLNATPKALFLKPKLDVLVNQLELLTQPAHFSPQSSEYRFQIAAVESVYPLIMPYFLP 133 Query: 118 RCLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPV----------ISRSVICMP 167 R + I H E L + D +T + + Sbjct: 134 TIFRHGPHLSISTH---AWTEQTFRKLQVGELDFGLTGKDIDINDAKLTLLPPADICEQE 190 Query: 168 LHTIRNTLICSNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFR 227 ++ + HP + + + Q+ + + + R I+ Sbjct: 191 IYRDNQRCVVRRGHPVLQYDWNLSSYLNLRHVQVRCDGNDRWLLDYRLADLGYERDIAIT 250 Query: 228 GSSLLTIINSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNL 287 + + TD + P + ++L E+ L P + + +++ N+ Sbjct: 251 VPDFNSAASLCTYTDFIFTAPSHFTHWVAKQMDLVELPLPMEFPPMAYTLFWHRERENDP 310 Query: 288 VFSRFIDRLN 297 + + Sbjct: 311 ALRWLRELIQ 320 >UniRef50_A6W028 Transcriptional regulator, LysR family n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W028_MARMS Length = 309 Score = 224 bits (570), Expect = 4e-57, Method: Composition-based stats. Identities = 65/296 (21%), Positives = 113/296 (38%), Gaps = 3/296 (1%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 KK DLNLLV + + SI+K AE L ++PSA+S SL RLR F D L + G+ + Sbjct: 3 FKKLDLNLLVALDTLLTEQSITKGAEKLNMSPSALSNSLSRLRDYFEDDLLTQIGRRMVI 62 Query: 67 TTTGLNLHHHLEKNLRGLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCLR--QDS 124 T G NL + L +E TI + E + I+ + ++ L Sbjct: 63 TPLGENLKVSVRNALNNIESTILVQPSFEPQTTDRIFSIFCSDYTQTVLVPHALEIVGKQ 122 Query: 125 SVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRI 184 + A N E L KADL+I +S C L+ + Sbjct: 123 KSTARFQLLAQVANNPHEQLEQGKADLLIIPSDFMSTEHPCDILYEEEFVCVVWKHSKIA 182 Query: 185 TDNSTYEQIMAEEFTQLISKSAGVDDI-QMEIDERFMNRKISFRGSSLLTIINSIAVTDL 243 + T E+ A + ++ D + + + R + S ++ + ++ Sbjct: 183 SGELTAEKYAAAGHVLMRPEATKKDFFGTLFTQKYGIKRHVIATTFSFASLPALVIGSEN 242 Query: 244 LGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNES 299 + + L LK + L +P +K + +++ N+ + L E+ Sbjct: 243 IATIHARLATKMAKVWPLKILPLPFDIPPMKQCVQWHQYRNNDEGLIWLRNTLKEA 298 >UniRef50_A9AQZ4 Transcriptional regulator, LysR family n=24 Tax=Burkholderiaceae RepID=A9AQZ4_BURM1 Length = 327 Score = 224 bits (570), Expect = 5e-57, Method: Composition-based stats. Identities = 58/300 (19%), Positives = 117/300 (39%), Gaps = 7/300 (2%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 + DLNL+ + ++S+A E L ++ VS +L RLRA F DPLF+R+ +G+ P Sbjct: 20 MDALDLNLIPYLVALDDTRNVSRAGELLGVSQPRVSTALGRLRAYFGDPLFVRTSRGMEP 79 Query: 67 TTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQD 123 T L L L +E+ + + + + F I + L++ Q Sbjct: 80 TPRALALLPAARDALAQIERGLVAPHDFDPAASTHTFSIALSDVGEIVFLPKLLQAFAQC 139 Query: 124 SSVEIECHDILMSAENAEELLVHRKADLVITQMPVIS-RSVICMPLHTIRNTLICSNRHP 182 + + + + L DL + P + + L T R + HP Sbjct: 140 AP-HANLRSVSLPHDEVGRGLEAGSIDLAVGYFPDLDGNNFFQQRLFTHRFVCLMRRGHP 198 Query: 183 R-ITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVT 241 T EQ + + ++ + ++ + ++ M R+ +++ ++ T Sbjct: 199 LEQARPFTVEQFLESGHAVVRAEGRSQEVLEKYLAKQRMQRRAVLETPHFMSLPFILSRT 258 Query: 242 DLLGIVPYELYNSYRDFLN-LKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 DL+ VP+ + +Y + ++ PLP L +++ N+ + + F Sbjct: 259 DLIATVPHAIGYAYAAEHAFIVPVEPPLPLPRFDLKQHWHRKFHNDPRTAWLRGVVASLF 318 >UniRef50_B8ERS8 Transcriptional regulator, LysR family n=1 Tax=Methylocella silvestris BL2 RepID=B8ERS8_METSB Length = 323 Score = 223 bits (569), Expect = 5e-57, Method: Composition-based stats. Identities = 52/314 (16%), Positives = 120/314 (38%), Gaps = 22/314 (7%) Query: 4 LYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKG 63 + ++ DLNLL +FE + +H S+ +A+ L +T SAVS +L RLR D LFI G Sbjct: 1 MVRIRTIDLNLLRVFEAVMRHRSVIRASRELGVTASAVSHALSRLRQALGDELFISGEAG 60 Query: 64 IAPTTTGLNLHHHLEKNLRGLEQTI--NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 + PT L L + L ++ + ++ + F I ++ + L+ L Sbjct: 61 MEPTARALELEPAIRDGLERIDHAVGAQPFVPTDAFRTFRIAATDYVAVAILPQLVGRLA 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 + + +I+ + + L + D V+ + + + + ++ H Sbjct: 121 EVAP-QIDLRIFPFNRTDVVRHLDEGRIDFVMGWFGDLPDRMRRATIVVEKEAMVVRTGH 179 Query: 182 PRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNR------------------- 222 P T E++ + + + D+R + R Sbjct: 180 PLTEGPLTKERLFSFPHIVVELIGTEEAAVDGFFDDRGVWRRVWIERLLIEADADQGEVG 239 Query: 223 KISFRGSSLLTIINSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKS 282 +++ + + V+D++ +P L + + +L + L + ++ + + +++ Sbjct: 240 RVAVSVPHYAAVPPMVRVSDMVATLPSALARAAVEQGSLVMLDLPYEPLAVPVEMVWHQR 299 Query: 283 SLNNLVFSRFIDRL 296 + + + L Sbjct: 300 TERDEGSQWLLGEL 313 >UniRef50_A1UYG7 Transcriptional regulator, LysR family n=45 Tax=Burkholderia RepID=A1UYG7_BURMS Length = 439 Score = 223 bits (569), Expect = 5e-57, Method: Composition-based stats. Identities = 55/294 (18%), Positives = 104/294 (35%), Gaps = 5/294 (1%) Query: 8 KKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPT 67 + DLNL + + +Y IS AA +L++T AV+ +L RLRA F DPLF+R G + PT Sbjct: 136 HRLDLNLFRVLDAVYVQGGISAAARALHLTQPAVTHALNRLRAHFGDPLFVRQGNKVVPT 195 Query: 68 TTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDS 124 + ++++L+GL+ + L +F++ ++ L+ L +++ Sbjct: 196 ERTREVIADVQRHLKGLQDAARAQTRFSPGALDMSFVVGVRDVLESIALPQLVETLAREA 255 Query: 125 SVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRI 184 + + + L DL I + ++ + + H Sbjct: 256 P-GVRLVSRRVPVADIGRELGSGNLDLAIERRVPAGPRIVAEHVADDTLVVAMRRDHALA 314 Query: 185 TDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLL 244 A + + + + R+I +A DLL Sbjct: 315 GAPLRRADYFAAGHVTVSPLGEPHT-LDVLLGADGRFRRIQLVCQHYFAACQIVASGDLL 373 Query: 245 GIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 +P L L L L + +++S + F R+ E Sbjct: 374 LTLPRSYALRMTRLLPLAAQPLPLRLKPYPILAYWHESRELDRAHQWFRQRVIE 427 >UniRef50_Q081K6 Transcriptional regulator, LysR family n=2 Tax=Alteromonadales RepID=Q081K6_SHEFN Length = 326 Score = 223 bits (568), Expect = 6e-57, Method: Composition-based stats. Identities = 67/304 (22%), Positives = 131/304 (43%), Gaps = 9/304 (2%) Query: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 MA+ +++ DLNLL IFE +Y +++ A++SL+ITPSAVS +++RLR NDPLF+R Sbjct: 19 MADTKAIQQLDLNLLKIFEALYSEQNMTLASKSLFITPSAVSHAIKRLRLVLNDPLFVRQ 78 Query: 61 GKGIAPTTTGLNLHHHLEKNLRGLEQTIN---IVNKSELKKNFIIYGPQLISCSNNSMLI 117 G + PT + L L + Q + + ++ F I + + LI Sbjct: 79 GLQMQPTAACQRMAPQLISALNRIRQVLQQCGEFDPLTTEQTFKIAIHEALESQIMPTLI 138 Query: 118 RCLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLIC 177 + + + + + +S EN L + + DL I ++ + L + ++ Sbjct: 139 KQVVKLIP-HAKIASMSLSRENIARQLANGEVDLAIDVARAVNAPLAHKTLLSDPFCVLI 197 Query: 178 SNR----HPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLT 233 R H + T E + S+ G + + ++ +NR I +R S T Sbjct: 198 DRRQHAMHLEPSTKLTPTDYANAEHVAVSSRPIGRVMEDILLQQQGVNRHIKYRCQSYQT 257 Query: 234 IINSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFI 293 + + L+ +P + + +L + LP I ++ ++ ++ + F Sbjct: 258 AAKIVIGSPLMLTLPRSIAEQFIHP-DLHVCTMPFELPDIDTHLYWHMNTETDPAFVWLR 316 Query: 294 DRLN 297 ++ Sbjct: 317 AQIE 320 >UniRef50_A7JRS0 Possible LysR family transcriptional regulator n=3 Tax=Mannheimia haemolytica RepID=A7JRS0_PASHA Length = 302 Score = 223 bits (568), Expect = 6e-57, Method: Composition-based stats. Identities = 56/297 (18%), Positives = 113/297 (38%), Gaps = 7/297 (2%) Query: 4 LYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKG 63 + D++ D NLL F + ++S+AA+ L IT A+S L RLR FNDPLF+R G Sbjct: 1 MSDIRTLDFNLLKAFVVLLDECNVSRAAQRLSITQPAMSGILNRLRESFNDPLFVRVQHG 60 Query: 64 IAPTTTGLNLHHHLEKNLRGLEQTIN--IVNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 + PT L L L+ + + I+ L I + + Sbjct: 61 MQPTDRALQLGQTARNILQDISSMLQPPILEPEHLNMTLRIAAMDYVQQIIALP-LILRL 119 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 + + ++ + + +N + L +K DL + +S + L+ R S H Sbjct: 120 RRLAPNVKVALLPVQGQNIKTLFEQKKIDLALVSRQHLSTDTLKTVLYEERYVCAMSKTH 179 Query: 182 PRITDNSTYEQIMAEEFTQLISKSAGVDDI-QMEIDERFMNRKISFRGSSLLTIINSIAV 240 P + +Q F L + + + + RK+ + + + + Sbjct: 180 PMAQTPLSLDQFCNLPFAMLSYNGGEFSGATDLALQKIGLQRKVMVSVNHISLLPQLLQG 239 Query: 241 TDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLN 297 +DL+ ++P L + N+ + + +++++ + + + L Sbjct: 240 SDLVAVLPERLAKTLP---NVYLQPPPIEVEGFTMMMAWHERTEQDTAHRWLREVLQ 293 >UniRef50_B7VJC4 Putative LysR-like regular protein n=4 Tax=Vibrionales RepID=B7VJC4_VIBSL Length = 308 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 69/303 (22%), Positives = 130/303 (42%), Gaps = 6/303 (1%) Query: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 MA+ ++ K DLNLL+ + +Y+ S+SKAAE Y++ SA+S SLQRLR F+DPLF R Sbjct: 1 MAD-FNWKGIDLNLLIALQALYKTNSVSKAAERCYVSQSAMSHSLQRLRKLFDDPLFERV 59 Query: 61 GKGIAPTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLI 117 G + T + L +E L ++ + + + K + I L Sbjct: 60 GSKMEATDRAIELSSTVEALLNTIQSEVLLSKSFDAATYKGTWKIGLTDYAEQMFAPALF 119 Query: 118 RCLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLIC 177 ++Q S + ++ N +++ K D+ I +S+ L+T ++ + Sbjct: 120 DLIKQSSPNS-QVVLFNVNRSNYQQVFEDAKLDMAIGSFGEVSKQYRTTHLYTEQHVCLF 178 Query: 178 SNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINS 237 I + EQ +A E + + + + E +RK++ S+ LT+ Sbjct: 179 DKSVVSIEGPISLEQFVAVEHALVSPAGSLKTGVDKRLAELGFSRKVAICSSNFLTVKRL 238 Query: 238 IAVTDLLGIVPYELYNS-YRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRL 296 I +LL IVP + + +D + ++ +P + + Y K+ + Sbjct: 239 IRGRELLCIVPKLVARNDIQDQDTVVAVEPPIDVPDFDIQLIYRKTKHLDDKNKLLRKLF 298 Query: 297 NES 299 ++ Sbjct: 299 TQA 301 >UniRef50_A1UYR8 Transcriptional regulator, LysR family n=32 Tax=Burkholderia RepID=A1UYR8_BURMS Length = 313 Score = 222 bits (566), Expect = 1e-56, Method: Composition-based stats. Identities = 59/297 (19%), Positives = 118/297 (39%), Gaps = 5/297 (1%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 +L+ DLNLLVI + + +++A + + +T AVS +L RLR F D + +R+ G+ Sbjct: 1 MNLRSIDLNLLVILDALLAERQVTRAGQRIGLTQPAVSNALGRLRYVFKDEILMRTPLGM 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 T L + + L+ +E+ N + + F + L L+R +R Sbjct: 61 ELTPRAKALACPIRQILQQIEELFVPENQFDSFTSDRRFTLRMSDLTELLLPPPLLRNIR 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 + I + + ++A+ E L + D+ + ++ L R + S RH Sbjct: 121 GTAP-HIRMNVMHLNADKTVEALDSGRLDMAVCAGLDHPDAISSQVLFQDRLVCVLSRRH 179 Query: 182 PRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVT 241 P T E+ A +F + I + + R+I+F L + + + Sbjct: 180 PDANRPLTLERFAALDFLNVSINPVDSSLIDTMLADMRFTRRIAFNVPHWLVVPSMLDAL 239 Query: 242 DLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 L I+ S D L +L L + + +++ N++ + + + Sbjct: 240 PLAVIMSERHALSLGDS-RLAIRELPLDLEPVTWTLYWHRRYDNSVAHEWLRNCITD 295 >UniRef50_A3VWI6 Transcriptional regulatory protein n=1 Tax=Roseovarius sp. 217 RepID=A3VWI6_9RHOB Length = 314 Score = 222 bits (566), Expect = 1e-56, Method: Composition-based stats. Identities = 61/297 (20%), Positives = 119/297 (40%), Gaps = 4/297 (1%) Query: 4 LYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKG 63 + + + DLNLL IF + ++++AA L +T +VS ++QRLR D LFI+ G Sbjct: 1 MINRRYTDLNLLRIFHVVMLERNMTRAAARLNMTQPSVSNAIQRLREVLADDLFIKVSGG 60 Query: 64 IAPTTTGLNLHHHLEKNLRGLEQTINI--VNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 + PT + + +++ L QTI+ S +F I ++ + L Sbjct: 61 VVPTAKAEAIWPTIRNSIQSLIQTIDPERFEPSVATDSFRIAMSDFVATQLILPVAGPLF 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 +++ + S +N L+ + D+ +P + + L T+ H Sbjct: 121 -NAAPHVSLVLCQNSVDNIVPGLIDGQFDMAAGVIPYKEARIRSILLKTLTYVCAMRKDH 179 Query: 182 PRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVT 241 P + T+ MA Q+ I + +R M R I+ ++ T Sbjct: 180 PLAKEPLTFADFMAARHLQVSLSGRS-GFIDRYLTDRGMFRDIALTIRHYTLAPEILSST 238 Query: 242 DLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 DL+ I+P E+ + + LK P+ + + +++ + +RL + Sbjct: 239 DLIAILPSEVISHSHQYDLLKTTAPPIPVYEDSISLLWHERNDAMPAHRWMRERLID 295 >UniRef50_Q3JR86 LysR-family regultor n=70 Tax=Proteobacteria RepID=Q3JR86_BURP1 Length = 508 Score = 222 bits (566), Expect = 1e-56, Method: Composition-based stats. Identities = 58/295 (19%), Positives = 107/295 (36%), Gaps = 5/295 (1%) Query: 10 FDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTT 69 D LL + + S+++AA L + A+S +L+RLR DPL +R G+ PT Sbjct: 207 IDTYLLRVLHTLLMERSVTRAAVKLNQSQPAISAALRRLRDITGDPLLVRGKSGMVPTEY 266 Query: 70 GLNLHHHLEKNLRGLEQT---INIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSV 126 GL L ++ LR +E+ + + + + + I P ++ ++ RQ + Sbjct: 267 GLRLLEPVQNALREIERIKFQQHNFDPATSIRCYRIGCPDYLNVLFVPTVVERFRQAAPN 326 Query: 127 EIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRIT- 185 L A + E L K D+V+ P + L + SN HP Sbjct: 327 ATLEFHSLGPAFDYELALEDGKLDIVVGNWPEPPEQLHLSNLFVDEIVCLMSNSHPFAKR 386 Query: 186 DNSTYEQIMAEEFTQLISKSAG-VDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLL 244 T +Q + S G I + + + R + + +DL+ Sbjct: 387 GGLTLDQYLNAPHLAPTPYSVGQRGAIDVHLARERLKRHVVVTLPYFNLAPYVLVKSDLI 446 Query: 245 GIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNES 299 + Y FL L + P ++ Y +++ + + E+ Sbjct: 447 FTTTRLFADHYAKFLPLSVVPAPLDFPPMQYYQLWHERCHYSDEVRWLRGLVAEA 501 >UniRef50_C5AL93 Transcriptional regulator, LysR family protein n=13 Tax=Burkholderia RepID=C5AL93_BURGB Length = 331 Score = 222 bits (566), Expect = 1e-56, Method: Composition-based stats. Identities = 54/302 (17%), Positives = 111/302 (36%), Gaps = 7/302 (2%) Query: 4 LYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKG 63 + L DLNLL +F I + S++KA L ++ A+S SL RLRA F+DPLF+R+ G Sbjct: 1 MRSLDGVDLNLLQVFLAIVEEQSLTKAGARLALSQPAMSYSLARLRALFDDPLFVRTRHG 60 Query: 64 IAPTTTGLNLHHHLEKNLRGLEQTIN---IVNKSELKKNFIIYGPQLISCSNNSMLIRCL 120 + PT L + + L + + + + + + F + + + + Sbjct: 61 MQPTPISQELAVIVARALDTVREALRYAERFDPAVSTRAFRLSLSDAGEMAYLPSICEEV 120 Query: 121 RQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNR 180 + + I+ + E+ L R+ D I +P ++ L + R Sbjct: 121 NRLAP-NIKVVVQPLPVGEIEDALRARRLDFAIGNLPELTARTRHQVLFEEGYVCMMRRR 179 Query: 181 --HPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSI 238 P T + + S + + + + R I + + + Sbjct: 180 VGGP-ARPALTLAEFGRASHVLVRSIEHSHHALDDALRTQGVARNIGLEVPHFVALPRVL 238 Query: 239 AVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 AVTD + +P L + +L + + + + +++ + + L + Sbjct: 239 AVTDFVATLPRRLAQIFAKDGAFDIFELPVAIAPVGVTMHWHEHFHEDEGIAWMRQLLGQ 298 Query: 299 SF 300 Sbjct: 299 IM 300 >UniRef50_Q393U0 Transcriptional regulator, LysR family n=6 Tax=Burkholderiales RepID=Q393U0_BURS3 Length = 310 Score = 222 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 50/298 (16%), Positives = 115/298 (38%), Gaps = 5/298 (1%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 +L+ DLNLLV + + +++AA + ++ SA+S +L RLR D L IR+ G+ Sbjct: 1 MNLRSVDLNLLVALDALLTEKHVTRAATKVGLSQSAMSSALGRLRILMRDELLIRNATGM 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTIN---IVNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 PT L L L + L E+ + + + +F + ++ L+ L Sbjct: 61 EPTPRALELEEPLRQLLHQAERLLESDGAFDPATTAGHFRLRMSDVLEYLLMPPLLAQLE 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 Q++ + + +S L D+ ++ + +V MPL R + + H Sbjct: 121 QEAP-GVTLDVVHLSPGQTVTALEADDIDVAVSMDLEHAGAVQAMPLFDDRMVCVMARDH 179 Query: 182 PRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVT 241 P + T + ++ ++ S + ++ R + L + + + + Sbjct: 180 PCAAEALTLDLFLSLPHLKVSISSTDGRYVDAKLAGMRRARNVVLNVPHWLVVPHLLRHS 239 Query: 242 DLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNES 299 ++ ++ L + L L + +++ + + +++ E+ Sbjct: 240 SMVAVMSARLAERFAAD-GLVLKALPFESAGFHWSMYWHRRHDSVPAQAWLREKIREA 296 >UniRef50_Q46T42 Regulatory protein, LysR:LysR, substrate-binding n=2 Tax=Burkholderiaceae RepID=Q46T42_RALEJ Length = 330 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 60/295 (20%), Positives = 120/295 (40%), Gaps = 5/295 (1%) Query: 10 FDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTT 69 FD NLL +F+ + + S+++AA L +T SA+S +L RLR F+DPLF+++ G+ PT Sbjct: 6 FDYNLLTVFDAMLRERSVTRAAAQLGLTQSAMSHALNRLREFFDDPLFVKTAAGMTPTIK 65 Query: 70 GLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSV 126 L + + + + + + +++ F + + L++ LR + Sbjct: 66 AEALSETVLDVMTAMRTRVLPQASFDPATMQRTFTLCMTDMGELVFLPPLMKRLRVVAP- 124 Query: 127 EIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRITD 186 + + + E LL ADL++ + S+ L I S ++ ++ D Sbjct: 125 HCKLRTLQVPVPQIEGLLASGDADLLLGSVQTAPESLFRQQLFMHGFVTIVSTKNRQVRD 184 Query: 187 NSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSI-AVTDLLG 245 T EQ + + + + R I L+I + +L+ Sbjct: 185 ALTIEQFESMPHVTVSLAGRTSPSYDAAFESHGLRRNIYLHTPHFLSIPLLMEQQPELIA 244 Query: 246 IVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 VP EL N + + ++ +K LP L ++ ++ + ++F Sbjct: 245 TVPQELANVFSRYGIVRVVKPPVVLPPYALSQYWHPRFHHDPAIVWLRQLVKQTF 299 >UniRef50_B4E7M9 LysR family regulatory protein n=1 Tax=Burkholderia cenocepacia J2315 RepID=B4E7M9_BURCJ Length = 299 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 63/295 (21%), Positives = 115/295 (38%), Gaps = 7/295 (2%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS--GKGI 64 +KK D+ LLV + + + ++++AA L I+ A+S L RLR +DPL + + G+G+ Sbjct: 1 MKKHDMGLLVSLDVLLEEANVTRAARRLAISQPALSAQLARLRQVLDDPLLVPAERGRGM 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 T L L + L LE + + S K++F I + + LI C+R Sbjct: 61 RLTPRAAQLKSPLHELLTRLEDLVEAPYAFDPSTAKRDFTIALNDNAAMTIGLDLIECIR 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 + S I + + + +L + DLVI + + L R + H Sbjct: 121 KQSYAGIRLAMLQIPRDEVLDLAARGRIDLVIGTRAFMPPGLRTHDLVYDRFQVAQRKGH 180 Query: 182 PRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVT 241 PR T T EQ A E + + + I + E R + + + T Sbjct: 181 PRGTAAMTLEQYCAYEHVLVSTNGSYHSGIDDFLAELGHYRHTTVSVQYYTAVPPILERT 240 Query: 242 DLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRL 296 + L +P + + + L +L + ++ +L ++L Sbjct: 241 NCLATLPERFLHRFDHM--IDRFDLPFAFDPFQLQVGWHPRFDEDLGHQWLREQL 293 >UniRef50_A5VCH0 Transcriptional regulator, LysR family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5VCH0_SPHWW Length = 327 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 62/315 (19%), Positives = 113/315 (35%), Gaps = 25/315 (7%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 + DLNLL +F+ + + S++ AA L +TPSAVS SL RLR D LF+R KG+ Sbjct: 4 IHFRSLDLNLLRVFDALTEEGSVTGAAGLLGLTPSAVSHSLNRLRHILKDDLFLRGAKGM 63 Query: 65 APTTTGLNLHHHLEKNLRGLEQTIN--IVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQ 122 PT L L + + L ++Q +N + + F I ++ +I R+ Sbjct: 64 NPTPKALALAVPIRRALVDIQQALNGDSFVPEKTDRRFSIACGDYVTAVLMPEVIARFRK 123 Query: 123 DSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHP 182 + + + + L + DL + I + PL + P Sbjct: 124 AAPLA---ELRIQPVGAVMKELDAGRIDLAMGGFERIPERLASEPLFADDMVWVMRADSP 180 Query: 183 RITDNSTYEQIMAEEFTQLISK--------------------SAGVDDIQMEIDERFMNR 222 T E + A + S + +ER + R Sbjct: 181 FANRQPTLEGLAALPHLAIASPDNDRAVSGIVSDAGLERRVVRDDPRILDQYFEERGLRR 240 Query: 223 KISFRGSSLLTIINSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKS 282 ++ + + + +A DL ++P L ++ D L K HP ++ +++ Sbjct: 241 TVAMTAPNPIVAMAIVAECDLAAMMPRNLAEAFADRYKLALWKPPHPSALFQISTVWHRW 300 Query: 283 SLNNLVFSRFIDRLN 297 + + Sbjct: 301 HGDQPAVDWLRAMIR 315 >UniRef50_C3MFM7 Putative transcriptional regulator, LysR family n=1 Tax=Rhizobium sp. NGR234 RepID=C3MFM7_RHISN Length = 409 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 67/303 (22%), Positives = 123/303 (40%), Gaps = 11/303 (3%) Query: 4 LYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKG 63 L +L FDLNLL +F+ + + S+++A + + ++ AVS +L+RLR +D LFIR G Sbjct: 42 LVNLNAFDLNLLRVFDALIRERSVTRAGDQIGLSQPAVSSALRRLRDLLDDQLFIRRGND 101 Query: 64 IAPTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCL 120 + PT L L + L +E + + + +++ F + G + S S L RC Sbjct: 102 MIPTPRALELGSPVRDALGKIELALHKRRHFDPATIQRRFTLLGSDIFSVMAMSALSRCC 161 Query: 121 RQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNR 180 +++ I H + + NAE LL D+ + + V MPL ++ S R Sbjct: 162 AEEAP-GISLHLVDSALGNAERLLQEDAVDIALETELNVPDWVSSMPLLAAPYVVVASAR 220 Query: 181 HP-------RITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLT 233 HP + + S + E+ + R ++ L Sbjct: 221 HPGITAAGVAAREAIPLDLFCRLHHVARSSAGVVNCVVDAELAKVGRKRHVALTMPHTLG 280 Query: 234 IINSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFI 293 + + A + L VP + L LK + PLP+ + + ++ + Sbjct: 281 VAVATANSLHLATVPRQFAELMASHLGLKIYEAPVPLPATNINVFWHSRHDGDPAHQWLR 340 Query: 294 DRL 296 ++ Sbjct: 341 RQI 343 >UniRef50_A7HRT9 Transcriptional regulator, LysR family n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HRT9_PARL1 Length = 315 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 73/298 (24%), Positives = 124/298 (41%), Gaps = 5/298 (1%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 ++++ DLNLL++F IY SISKAA L IT AVS +L+RLR D LF +SG G+ Sbjct: 1 MNIRELDLNLLLVFNAIYTERSISKAAVKLGITQPAVSNALRRLRNFTGDTLFYKSGSGV 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTIN---IVNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 APT L + L +E+ ++ + + ++ F I +I + L+ R Sbjct: 61 APTRAAATLAIPIGHALDTVERGLSSVRSFDPATSRRTFRIGVNDIIHDALVPALVGYTR 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 +++ + + + A E+L + D+ + I S++ + +I + H Sbjct: 121 REAP-NLILEFVQQVGDRALEMLKGGEIDMALLPNFAIDDSLVSTKVWDDSFAIIVARNH 179 Query: 182 PRITDN-STYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAV 240 P N T + I F I M R + + I +AV Sbjct: 180 PIAKSNRLTVDDIRELRFVVTTHVQRLRTFIDSAFRANGMERVTACAVADTHNIYPLVAV 239 Query: 241 TDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 +DL V + Y +L L LP I+ I++ K + + +R+ E Sbjct: 240 SDLAACVGRFHADRYNTDGSLVMFDLPFELPKIQGRIAWAKEADEDEGHRWVRERVLE 297 >UniRef50_C6B2W9 Transcriptional regulator, LysR family n=4 Tax=Rhizobiaceae RepID=C6B2W9_RHILS Length = 334 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 60/313 (19%), Positives = 120/313 (38%), Gaps = 14/313 (4%) Query: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 M N DL + DLNLLV+FE + + + ++ + L ++PSA+S L RLR DPLF+++ Sbjct: 1 MLNHIDLSRIDLNLLVLFETVMEERHVGRSGQRLNLSPSAISHGLGRLRMLLGDPLFLKT 60 Query: 61 GKGIAPTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLI 117 KG+ PT L + L + + + + ++ F I P +S L+ Sbjct: 61 PKGVVPTDRAEELAAPIADILARVRSVVATAEPFDPAHSQRRFTIGAPDGVSSVFLPPLL 120 Query: 118 RCLRQ-DSSVEIECHDIL---------MSAENAEELLVHRKADLVITQMPVISRSVICMP 167 L + + I +L ++ +A L R D+ I + Sbjct: 121 DLLAKFAPGIAISVRQLLPKQGEPSPDLAWRDALAALEARDMDIAIIPQAGFPIRFASLL 180 Query: 168 LHTIRNTLICSNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFR 227 L+ + HP + D T A + + + + +R+++ Sbjct: 181 LYEEDFVIAARQCHPFLIDQ-TLATYCAAQHLVVSHLGDTHGFVDNLLASHGCSRRVALT 239 Query: 228 GSSLLTIINSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNL 287 + + + +A TD + +P + + + PL + + K+++ + Sbjct: 240 VPNFMLALAVLAETDFISALPRRFVEMHAARFGVVSVNPPLPLGRFAINATAPKAAIRDE 299 Query: 288 VFSRFIDRLNESF 300 + + L S Sbjct: 300 GVAWLVRLLQASM 312 >UniRef50_Q88LJ0 Transcriptional regulator, LysR family n=1 Tax=Pseudomonas putida KT2440 RepID=Q88LJ0_PSEPK Length = 320 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 55/283 (19%), Positives = 116/283 (40%), Gaps = 6/283 (2%) Query: 22 YQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTTGLNLHHHLEKNL 81 Y+ ++S AA L ++ S SL+RLR F D LF+ +G+G+ PT +++ + L Sbjct: 18 YREQNLSAAARRLGMSQPMASASLRRLREYFEDQLFLSTGRGMRPTPFTVSIAASVSGVL 77 Query: 82 RGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSVEIECHDILMSAE 138 ++ I + + F I + + ++R L +D+ + + + + Sbjct: 78 ERIKHEILAKPAFQPRQSDRLFTISTSDIGALIFVPPILRRLGEDAPNT-DLRCVSLPHQ 136 Query: 139 NAEELLVHRKADLVITQMPVIS-RSVICMPLHTIRNTLICSNRHPRITDNSTYEQIMAEE 197 E+ L DL + P + V L T I HP I D + EQ +A + Sbjct: 137 QLEQALEQGSVDLAVGYFPDLQGEQVKTQALFEHNFTCIVRRNHPSIGDTLSLEQFLAAD 196 Query: 198 FTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLGIVPYELYNSYRD 257 + + + + + E + R++ +++ IA T+++ VP L + Sbjct: 197 HLVVNQEGRSQEIFEQRLRELKLQRRVHLEVPHFMSVPQLIASTNMVATVPLSLGVWFAS 256 Query: 258 FLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 +K + + +L + +++ ++ S F + + E Sbjct: 257 E-QIKMLTPPIEVEKFELKLHWHRQMEDDPAVSWFRNAVFEEL 298 >UniRef50_Q30XG7 Conserved hypothetical transcriptional regulator, LysR family n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q30XG7_DESDG Length = 309 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 57/301 (18%), Positives = 114/301 (37%), Gaps = 12/301 (3%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 D+ +LNLLV + + ++++AAE L+IT S +S++L +LR F+DPL +RSG + Sbjct: 1 MDISSVNLNLLVALKALLDEGNVTRAAERLHITQSGMSKNLAQLRELFDDPLLVRSGNAL 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTINI--VNKSELKKNFIIYGPQLISCSNNS-MLIRCLR 121 T L LE L + + + +++F + ++ L L Sbjct: 61 VLTERARELEGPLEMVLGNVHALFEAQRFDPATCRRSFTLAVTDYVAQYILPDALGAILA 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 ++I+ + ++ L K D+ + SV + + R + H Sbjct: 121 AAPGIDIQA---IGWEPDSMRALAEGKIDMATCLTEGVPASVEQLRVGEDRFACLMRAGH 177 Query: 182 PR-ITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAV 240 P ++ + + + V I + + +R I R + + ++ Sbjct: 178 PLAAAGAMRLDRYVQADHAAITIGGDKVRIIDRVLGKLGHSRNIRLRVPFYASAVEIVSR 237 Query: 241 TDLLGIVPYELYNSYRDFLN-----LKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDR 295 TDLL +P + + N L L + S + I ++ + + Sbjct: 238 TDLLLTLPAHVARNVIQARNPSEPALAWAPLPFAVDSFEYSIIWHARFHGDPGHRWVREM 297 Query: 296 L 296 L Sbjct: 298 L 298 >UniRef50_Q0BPL7 Transcriptional regulators, LysR family n=1 Tax=Granulibacter bethesdensis CGDNIH1 RepID=Q0BPL7_GRABC Length = 308 Score = 221 bits (563), Expect = 2e-56, Method: Composition-based stats. Identities = 52/294 (17%), Positives = 101/294 (34%), Gaps = 4/294 (1%) Query: 6 DLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIA 65 +L + DLNLL F+ IY S++KAAE + + SA+S +L RLR D LF+R+ G+ Sbjct: 7 NLSRLDLNLLTAFDAIYTERSVTKAAECIGVGQSAMSHNLARLREALQDELFVRTPSGME 66 Query: 66 PTTTGLNLHHHLEKNLRGLEQ---TINIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQ 122 PT + + L ++ T + ++ + I I L+ + + Sbjct: 67 PTPRARAIADTVRNLLWTVQDKLLTTRSFTPATAERIWRIGLADNIESLLMPPLLDMMLK 126 Query: 123 DSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHP 182 ++ + I E L + D+ I + + Sbjct: 127 EAP-GMRIQAIFTDGLRVLEALDRDELDMGIGVFRHGGNVHKRRNFAPDSYLCLYDPKQI 185 Query: 183 RITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTD 242 + T +Q + + + + R I L++ + Sbjct: 186 TLEGPITLDQYASLPHVLVSLRGIFHGVADDALSLLGRTRTIVMTTPHFLSVPYVLRGAP 245 Query: 243 LLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRL 296 ++ +P L S L L L +L + ++ S N+ + + Sbjct: 246 VITTLPGTLARSAASAHGLCVSPLPFELAPFRLSMLWHSSYDNDPAHRWLRNTV 299 >UniRef50_A3QJ07 Transcriptional regulator, LysR family n=25 Tax=Alteromonadales RepID=A3QJ07_SHELP Length = 330 Score = 221 bits (563), Expect = 3e-56, Method: Composition-based stats. Identities = 62/312 (19%), Positives = 118/312 (37%), Gaps = 20/312 (6%) Query: 2 ANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSG 61 NL +L + DLNLLV+ + + + S+++AA L+++ SA+S+SL RLR DPLFIR+ Sbjct: 1 MNLDNLARIDLNLLVMLQVLLEERSVTRAASRLHLSQSALSKSLNRLRDTLGDPLFIRTA 60 Query: 62 KGIAPTTTGLNLHHHLEKNLRGLEQTINI--VNKSELKKNFIIYGPQLISCSNNSMLI-R 118 G+ PT L L L+GL Q N + ++ F + + I Sbjct: 61 HGLKPTAHAALLGQQLPDMLQGLYQLTQPPSFNPASSRRQFSFAMVESAYETLIPYFIGP 120 Query: 119 CLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPV----------ISRSVICMPL 168 L ++ + D + E + L + D IT + + + L Sbjct: 121 LLNNAPNLRL---DSYLWTEKSLSSLQKGQIDFGITGRDINPQSDLIIDRLPEGIAHQTL 177 Query: 169 HTIRNTLICSNRHPRI----TDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKI 224 T + HP + + + Q+ + + + + R + Sbjct: 178 FTDHQVCLVRQGHPMLPAIRNHQWDLDIYLEMSHVQVRCEGNEWWALDYFLAKSGQRRHL 237 Query: 225 SFRGSSLLTIINSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSL 284 S + A +DL+ +P R L+E+ L S+ + +++ + Sbjct: 238 STTVPDFYGAASVCAHSDLIFTLPSSFAAHARKLYALEELPLPFDFHSLAYVLLWHERND 297 Query: 285 NNLVFSRFIDRL 296 + + + Sbjct: 298 DEPGHKWIRETI 309 >UniRef50_B6JAE3 MexT protein n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JAE3_OLICO Length = 311 Score = 221 bits (563), Expect = 3e-56, Method: Composition-based stats. Identities = 57/305 (18%), Positives = 109/305 (35%), Gaps = 9/305 (2%) Query: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 + + +L + DLNLLV+F+ I S + AA L ++ AVS +L RLR DPLF+R Sbjct: 8 LMHQKNLARLDLNLLVVFDAIASARSTTLAATQLSLSQPAVSHALSRLRRLIGDPLFVRG 67 Query: 61 GKGIAPTTTGLNLHHHLEKNLR--GLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIR 118 T + + L G+ + +E ++ F I + L+R Sbjct: 68 RGRFVLTPRAEGMVLQVRDILNAVGVVLANAPFDPAENERTFRIAASDYTMLTIMPTLVR 127 Query: 119 CLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICS 178 L + S ++ L D + + MPL + Sbjct: 128 TLHRASPRA--KLEVFSVGSQTIAQLESNDLDCTFWALKPPGAPYVTMPLFRESSKGFLD 185 Query: 179 NRHPRIT----DNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTI 234 RHP T + + + + + + + R I SS + Sbjct: 186 RRHPLAKPANRGRLTLDDYVGYPHVIAKFRDSNPSPVDVALAAVGRKRTIGLASSSFIGN 245 Query: 235 INSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFID 294 I +++ T+L+ +P L +S + LK L + + +++ + + Sbjct: 246 ITALSGTNLIATLPSRL-SSIAESYGLKSFDLPIRIEDYTYSLVWHQRTDADPACIWLRK 304 Query: 295 RLNES 299 + ++ Sbjct: 305 VIAQT 309 >UniRef50_A4GJC2 Transcriptional regulator LysR family protein n=1 Tax=uncultured marine bacterium EB0_49D07 RepID=A4GJC2_9BACT Length = 303 Score = 220 bits (562), Expect = 4e-56, Method: Composition-based stats. Identities = 61/300 (20%), Positives = 134/300 (44%), Gaps = 9/300 (3%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 + FDLNL VI IY S++KAAE + IT AVS +L RLR +F+D LF+R+G G+ Sbjct: 1 MKISSFDLNLFVIMNSIYTEGSLTKAAEVVGITQPAVSNALSRLREKFDDELFVRTGSGM 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTIN---IVNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 PT N+ ++ L+ +++++N N ++ F I + ++L+ + Sbjct: 61 VPTQKTENIIQDIQNALQLMQKSVNEPDEFNPKTSERTFRISLGDINEGRILAILMSKIG 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 + + ++ + + L + + S+ M + + + + H Sbjct: 121 KSAP-HVKIESYYSARDQVPHALATNELSFAVDPFIPNSKDTNSMKVFSDKFVVAHRANH 179 Query: 182 PRIT-DNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAV 240 +N E+++ ++ + ++ G ++ME+ + + +++ R L + Sbjct: 180 DVSKIENLNLEEMLKLKYINISNRKRGASVVEMEMQKMQLQPEMALRAQHYLVTPEIVRS 239 Query: 241 TDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 +DL + ++ L ++L +P+++ Y+ ++ S N+ + + ESF Sbjct: 240 SDLCLLC----AETFAKKHGLSYVELPFKVPALEQYLIWHNSDDNDGSHIWMRNLIAESF 295 >UniRef50_Q471I4 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Ralstonia eutropha JMP134 RepID=Q471I4_RALEJ Length = 323 Score = 220 bits (562), Expect = 4e-56, Method: Composition-based stats. Identities = 59/297 (19%), Positives = 117/297 (39%), Gaps = 6/297 (2%) Query: 9 KFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTT 68 + LN L++ + + S++KAA L +T A+S++L RLR F DPLF+R G + PT Sbjct: 11 ELSLNQLLVLDVLLSERSLTKAARVLNLTQPALSKTLARLRQYFGDPLFVRVGLRMEPTP 70 Query: 69 TGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSS 125 L L + L+ + + + +++F + + L+ L +++ Sbjct: 71 KALELADPVRGILQSVRALRSDHVGFDPRTSQRSFSFFLLDAGASQMLPPLLSRLAEEAP 130 Query: 126 VEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRIT 185 I + A + + L + DL I P +++S+ L + HPR+ Sbjct: 131 -GILVQAVNADATHLDIWLENGLVDLAIGSFPGLTQSIRRQLLWHETYGAVVRKDHPRLA 189 Query: 186 DNSTYEQIMAEEFTQLISKSAGVDD--IQMEIDERFMNRKISFRGSSLLTIINSIAVTDL 243 + +AE+ + + G I+ I+ + I R S T +D Sbjct: 190 QLGDLDAFVAEKHVLVSAVGTGHQHLSIERAIEAAVPHTNIICRVPSFATAGLIAKHSDA 249 Query: 244 LGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 + ++P L + L+L + LP + + ++ ++ F Sbjct: 250 VAVLPLTLARALCKDLDLTVVMPPLTLPGMDIAQHWHDRVHREPGNQWIRALVHRLF 306 >UniRef50_C6XR04 Transcriptional regulator, LysR family n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XR04_HIRBI Length = 302 Score = 220 bits (561), Expect = 4e-56, Method: Composition-based stats. Identities = 62/294 (21%), Positives = 124/294 (42%), Gaps = 9/294 (3%) Query: 9 KFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTT 68 + DLNLL +FE +Y+ ++++AA L ++PSAVS +L+RLRA NDPLF++ G+ + PT Sbjct: 10 RLDLNLLKVFEAVYREQNLTRAANLLSLSPSAVSHALRRLRAHLNDPLFVKEGRIMRPTP 69 Query: 69 TGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSS 125 + L + L + + ++ K F I P + + +RQ + Sbjct: 70 VCARMAPDLLDEIDRLRALLQSWGKFDPAQSKIVFTIGMPDAMEIVFFPEFVEKIRQLAP 129 Query: 126 VEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRIT 185 + L D+ + S+ + PL + I S H Sbjct: 130 -NVRIISARYDRNEMVASLSGHTLDICVDIALPTSKQLRHHPLTAD-DWCIVSKTH---- 183 Query: 186 DNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLG 245 T +A+E + +++ G +++R + R + R + L+ + + +D + Sbjct: 184 TIQTAADYLAQEHIAVSARTVGTVLEDSALEQRGIFRDVRVRCQNYLSALAIVERSDRIL 243 Query: 246 IVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNES 299 +P L S LK + +P I+L + ++ + + + + ++ Sbjct: 244 TMPKRLAQSMIQSRPLKIQDVPFSMPPIELNLYWHSDNEADSANKWLREIVIDT 297 >UniRef50_A1U8Q8 Transcriptional regulator, LysR family n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1U8Q8_MARAV Length = 312 Score = 220 bits (561), Expect = 4e-56, Method: Composition-based stats. Identities = 53/296 (17%), Positives = 117/296 (39%), Gaps = 9/296 (3%) Query: 9 KFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTT 68 +DLNLL F +Y ++++A E L+++ +VS +L RLR F DPLFIR + + PT Sbjct: 4 NYDLNLLRTFHALYLEQNVTRAGERLHLSQPSVSAALGRLRELFKDPLFIRDRQRMRPTE 63 Query: 69 TGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSS 125 T +L +E L L+ I + + +++F I L LR+ + Sbjct: 64 TADHLFPVIEAALTDLDGLITSERDFSPATEQRHFEIAANDYFEVLILPALASVLREQAP 123 Query: 126 VEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRI- 184 I +S + +E ++ DL + +++ + + N HP + Sbjct: 124 -GITLQVRRLSQDMSEAGIMSGTTDLAFGRQVDPPDNLVVREVILEGIECLVGNEHPLLE 182 Query: 185 ----TDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAV 240 T + + + I +++ + + RK++ + + + + Sbjct: 183 RLKGNGQMTRDDFERYAHVLIQPHTRLKSGIFKQLESQNLKRKVALAVTYFMAVPALLEG 242 Query: 241 TDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRL 296 + L+ +P L +R + + + ++S++ + +++ Sbjct: 243 SSLIASLPTGLCQHFRRQFAVTPVAPPVAFDAFPFHLSWHHRYQKDPAHRWLREQI 298 >UniRef50_D0LQN8 Transcriptional regulator, LysR family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LQN8_HALO1 Length = 302 Score = 220 bits (561), Expect = 5e-56, Method: Composition-based stats. Identities = 59/302 (19%), Positives = 120/302 (39%), Gaps = 5/302 (1%) Query: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 MA + +L D+NLLV + + S+++AA ++PSA+S+ L RLR F D L +R Sbjct: 1 MAAMRNLHAVDMNLLVALDALLTTRSVTRAAGLAGLSPSAMSRVLGRLRDLFEDELLVRV 60 Query: 61 GKGIAPTTTGLNLHHHLEKNLRGLEQTIN--IVNKSELKKNFIIYGPQLISCSNNSMLIR 118 G + PT + L LR EQ ++ + SE + + + ++ L+ Sbjct: 61 GHELLPTARAQQVQPRLRVLLRDTEQLLSPPATSASEFEGRLTVLLTEHLAKLVLPSLLV 120 Query: 119 CLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICS 178 C+R+++ D+ E L A L + S+ + L + Sbjct: 121 CVREEAP--RLALDVRHPGPYPESALQQGDAVLWVDVTYEPDPSLQAVALFAEPYLSVVR 178 Query: 179 NRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSI 238 HP + + +A + + G D+ + ++ R ++ + + + + Sbjct: 179 CEHPLVGTPVGLDDWVAYPHVSVSVRGWGRSDVDIMLERAGRTRHVALTVHAFALVADVV 238 Query: 239 AVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 D + +P L D + + LP + +Y +++ S + + ++ E Sbjct: 239 VCGDYVSTMPARLAQRLVDERH-TVLTPPIELPPLSIYACWHRRSDTDPRAAWIRQKVLE 297 Query: 299 SF 300 F Sbjct: 298 LF 299 >UniRef50_A3KIZ0 Putative LysR-family transcriptional regulatory protein n=3 Tax=Streptomyces RepID=A3KIZ0_STRAM Length = 312 Score = 220 bits (560), Expect = 6e-56, Method: Composition-based stats. Identities = 65/298 (21%), Positives = 125/298 (41%), Gaps = 6/298 (2%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 + FDLNL +F +Y+ S++ AE+L++T VS SL +LR F D LF R+G+G+ P Sbjct: 1 MGTFDLNLARVFVLLYETGSVTATAETLHVTQPTVSYSLGKLRRHFGDELFRRNGRGLTP 60 Query: 67 TTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQD 123 T L+ L++ L ++ T+ + + + F I L + L+ R+ Sbjct: 61 TAGARRLYEPLQRALAEIDGTVRQGDAFDAGTMSGRFTIALSDLGEATLLPRLLAAARER 120 Query: 124 SSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPR 183 + + E+AE L D+ + + S + +PL R L+ + HPR Sbjct: 121 AP-GVSFTVRPFDVEDAESQLRRGDLDVFVATPVITSHLTVRIPLFRERYVLMVAADHPR 179 Query: 184 I-TDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTD 242 + D T + AE + S G + + + +++ + + + TD Sbjct: 180 VRGDEVTLAGLAAEHHATVFGPS-GHVAPRAVLAAHGLLERVAVDATRFSMLPYLLEQTD 238 Query: 243 LLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 L+ IVP + + ++ ++L I++ + S + + + E Sbjct: 239 LVAIVPEYVGEVFTASHRVRLVRLPFETQPIEIALYARHESSRSPAQRWLVQFMAEVL 296 >UniRef50_A7K354 LysR substrate binding domain protein n=17 Tax=Gammaproteobacteria RepID=A7K354_VIBSE Length = 314 Score = 220 bits (560), Expect = 6e-56, Method: Composition-based stats. Identities = 66/296 (22%), Positives = 127/296 (42%), Gaps = 4/296 (1%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 + DLNLLV F +Y++ S+S AAE Y++ SA+S SL RLR F+DPLF R G + P Sbjct: 15 WRNIDLNLLVTFSYLYRYRSVSVAAEKSYVSQSAMSHSLSRLRLLFDDPLFERKGHKMEP 74 Query: 67 TTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQD 123 T ++ + L + + + + I L +RQ Sbjct: 75 TEHAHHIAPTVHHLLDSIAKDLLTKSAFQPENYAGICRIGLTDYAEFIFAPRLYDEIRQR 134 Query: 124 SSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPR 183 + E + I ++ N L H K D++I MPV+ + + L+T ++ +C + + Sbjct: 135 AP-EAQISFINVNRSNYVALTEHEKLDVIIGSMPVLDDNFESLYLYTEKHVCMCDKQVLK 193 Query: 184 ITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDL 243 + E E + + + ++ E ++RK++ + LTI + + DL Sbjct: 194 GETQLSLEAFANIEQALVSPDGSLKTQVDQKLAEHGLSRKVTVASRNFLTIRHLLKKRDL 253 Query: 244 LGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNES 299 + IVP ++ + +L + + + + ++ S N + ++ + Sbjct: 254 IAIVPEKMALAEGFSDDLITVNPPIAVADFDIAMLWHSSRNNEDKGIWLRELVSST 309 >UniRef50_A3VAM0 Nodulation protein d1 n=1 Tax=Rhodobacterales bacterium HTCC2654 RepID=A3VAM0_9RHOB Length = 312 Score = 220 bits (560), Expect = 7e-56, Method: Composition-based stats. Identities = 63/297 (21%), Positives = 121/297 (40%), Gaps = 8/297 (2%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 K DLNLLV + + + ++S+AAE L+++ SA S +L RLR FND L ++ G+ + Sbjct: 5 FKGLDLNLLVALDVLLREKNVSRAAEKLFLSQSATSGALARLREYFNDDLLVQVGRQMVL 64 Query: 67 TTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCL-RQ 122 T L + L ++ TI + S + I I+ S +R + + Sbjct: 65 TPRATALSGKVRSALVQIDGTIIQSPEFDPSTAVRILRIISSDFITISVLREAVREIGKS 124 Query: 123 DSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHP 182 + I DI A E + + DL++ IS T +I + + Sbjct: 125 APGLTI---DIQQPANKPHEKIERGEVDLLLMPELYISPDHPSEQFFTDDYVVIAWSGNT 181 Query: 183 RITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDER-FMNRKISFRGSSLLTIINSIAVT 241 + D T +Q A ++ +S I + R I+ S + I T Sbjct: 182 QFGDTITEDQFFAARHATVMFESHTPSYEAWFIQNKDGRERDIAIVVGSFSALPFMIEGT 241 Query: 242 DLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 D L ++ + + + + L+ ++ +P + I ++ S + + ++++E Sbjct: 242 DYLALMHRSMADIFARQMPLRLLRCPIDIPPLVESIQWHTYSDGDECLAWVREKIHE 298 >UniRef50_B9B1S8 Transcriptional regulator, LysR family n=1 Tax=Burkholderia multivorans CGD1 RepID=B9B1S8_9BURK Length = 319 Score = 219 bits (559), Expect = 7e-56, Method: Composition-based stats. Identities = 64/299 (21%), Positives = 113/299 (37%), Gaps = 5/299 (1%) Query: 4 LYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKG 63 + + DLNLL +F+ I + S++KA E L ++ AVS SL RLR F+DPLF+R+ G Sbjct: 14 MTSVDHLDLNLLRVFQAIVEERSLTKAGERLALSQPAVSYSLGRLRTLFDDPLFVRTRAG 73 Query: 64 IAPTTTGLNLHHHLEKNLRGLEQTIN---IVNKSELKKNFIIYGPQLISCSNNSMLIRCL 120 + PT L L + K L + + + + + F + + + R L Sbjct: 74 MQPTPVALELAGIVGKALDMVRVALRYAERFDPATSTRTFRLSLSDAGEMAYLPAICRAL 133 Query: 121 RQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLIC-SN 179 R+ + + M E EE L + D I +P + L + Sbjct: 134 RERAP-RVTLSVQPMPVEAIEEALRASRLDFAIGNLPELMPRTRHQLLFEETYVCMTGRR 192 Query: 180 RHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIA 239 R T EQ + + S + + + + R ++ + + + Sbjct: 193 RGLPSGTTLTLEQFVRAAHVNVKSVEHSHHALDDALRAQGVGRNVALEVPHFVALPGVLQ 252 Query: 240 VTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 VTDL +P L + L PLP + + +++ + + L E Sbjct: 253 VTDLYATLPKRLAQILNRDNAFRLYALPVPLPPAPVTMHWHEHFHEDEGITWMRALLAE 311 >UniRef50_D1SW87 Transcriptional regulator, LysR family n=1 Tax=Acidovorax avenae subsp. avenae ATCC 19860 RepID=D1SW87_9BURK Length = 330 Score = 219 bits (559), Expect = 8e-56, Method: Composition-based stats. Identities = 55/297 (18%), Positives = 115/297 (38%), Gaps = 8/297 (2%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 ++ DLNL ++F+ I+ S++ A E L +T SAVS +L+R+R +FND LF+RS +G+ Sbjct: 1 MNIHSIDLNLFLVFQAIFATRSVTLAGERLGMTQSAVSNALKRMRERFNDVLFVRSAEGM 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 PT L +E+ L Q ++ + F I + L+ R Sbjct: 61 VPTPLAERLIGPVEEGLAAFSQAVDQGRTFEAGTSGRLFRIAVNDIGQLVMMPRLLSLAR 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 + I + + A + ++H + D+ + + S L ++ + Sbjct: 121 GLAP-GIRFETVDVPRAEARQRMLHGQIDVALGSWEPMGPSFYQQRLFDETFVVLVARAS 179 Query: 182 PR-ITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFM--NRKISFRGSSLLTIINSI 238 P D+ + +A E + +Q ++ R++ + L + + + Sbjct: 180 PLGTRDSIALDDYLAAEHIAYRPRGTTDHQLQQALERVGALDRRRVVLTAAHSLGLSSIV 239 Query: 239 AVTDLLGIVPYELYN-SYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFID 294 A T L+ P L +L + + ++ +++ + + Sbjct: 240 ATTGLVLTAPQRLAQAMVASRSDLHILNAPFEVAPFEISQQWHERFHQDSGNRWLRE 296 >UniRef50_Q88I06 Nodulation protein d1 n=4 Tax=Gammaproteobacteria RepID=Q88I06_PSEPK Length = 312 Score = 219 bits (559), Expect = 8e-56, Method: Composition-based stats. Identities = 55/296 (18%), Positives = 131/296 (44%), Gaps = 6/296 (2%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 DLNLLV + + + +I++AAE L++T SA S L RLR F D L ++ G+ + P Sbjct: 3 FHHLDLNLLVALDILLEEQNITRAAERLHMTQSATSGVLGRLRTFFEDELLVQVGRKMQP 62 Query: 67 TTTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCLRQD 123 T L L + + L + +I + + K++F + + + +I+ + Q+ Sbjct: 63 TPYALELAKPVREVLLTIRASITAKPVFDPAASKRHFRLVASDYLISVVFAQVIQKIHQE 122 Query: 124 SSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPR 183 + +++ +++ ELL+ + D++I + L + + +P Sbjct: 123 APQ--ITFEMIGPGDSSAELLMRGEVDMMIVPERYLIEGHPAQLLFEEDHVCVVWRDNPE 180 Query: 184 ITDNSTYEQIMAEEFTQLI-SKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTD 242 + ++ T EQ M + ++ + +++ NR++ + T+ + T Sbjct: 181 VGEHLTLEQYMQMGHISVGFGRNRHLSIEDWFMNQYGFNRRLEVITNDFNTLPQLLVGTV 240 Query: 243 LLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 + + L Y +L L+ + +P ++ ++ +++S + + +R+++ Sbjct: 241 RVATMHRRLAELYAGYLPLRLLPPPVKIPVMREFMLWHRSMDGDPMHRWLRERISD 296 >UniRef50_A4Z170 Putative transcriptional regulatory protein, LysR-family n=1 Tax=Bradyrhizobium sp. ORS278 RepID=A4Z170_BRASO Length = 313 Score = 219 bits (559), Expect = 9e-56, Method: Composition-based stats. Identities = 52/304 (17%), Positives = 112/304 (36%), Gaps = 8/304 (2%) Query: 1 MAN--LYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFI 58 M N + L DLNLLV+FE + ++++AA + + + S++L RLR F DPLF+ Sbjct: 1 MKNDQMPSLAHVDLNLLVLFEALLSERNVTRAAVRVGLAQPSASKALDRLRHLFGDPLFL 60 Query: 59 RSGKGIAPTTTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSM 115 R+ G+ PT L L + L + + + + + + + Sbjct: 61 RAPGGMRPTPRALELAPEIALVLERVRALVAAELPFDPATARGSLRLAMSDAAEFVLLPG 120 Query: 116 LIRCLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTL 175 L+ L + + + + L + D V+ + + PL R Sbjct: 121 LVAQLAGTAP-GVTLQARPLDKDRVFAELDEGRLDAVVGVFRELPKRFRSAPLFEERFVC 179 Query: 176 ICSNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTII 235 + HPR+ T E + + + + ++ ++R+++ + L + Sbjct: 180 LARADHPRLATGLTLETYVELPHLLVTLRDDRKGAVDDALEAIGLHRRVAATLTRFLALP 239 Query: 236 NSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDR 295 +A +D + VP N + + LP + + + + + + Sbjct: 240 PVLAFSDAIATVPSRFA--AASAPNCRLHEPPLALPRWTEQLVWRAGAEREPMIAWGLQL 297 Query: 296 LNES 299 + + Sbjct: 298 IRSA 301 >UniRef50_A8KZI9 Transcriptional regulator, LysR family n=4 Tax=Actinomycetales RepID=A8KZI9_FRASN Length = 310 Score = 219 bits (558), Expect = 9e-56, Method: Composition-based stats. Identities = 63/303 (20%), Positives = 118/303 (38%), Gaps = 7/303 (2%) Query: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 M + DLNLLV + + + S++ AA L +T SAVS++L RLR +DP+ +R+ Sbjct: 1 MHAMQSTSSLDLNLLVALDALLEERSVNAAARRLRLTESAVSRALGRLRRAMDDPVLVRA 60 Query: 61 GKGIAPTTTGLNLHHHLEKNLRGLEQTINIV---NKSELKKNFIIYGPQ-LISCSNNSML 116 G + PT L + + + + + + L + F I L + +L Sbjct: 61 GHRMVPTPRALAVQAEVHALVERAHAVFTPIREPDLATLARTFTILASDALTTAIGVDLL 120 Query: 117 IRCLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLI 176 R R V + + ++ L ADL I + S + L + + Sbjct: 121 DRLTRDAPGVRVRFLPEPSATDDP---LRDGTADLEIGDIDSTSPEIHIEVLGEEQALAV 177 Query: 177 CSNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIIN 236 HP T E++ A + + + R + R ++ S + Sbjct: 178 VRAGHPLTRGRLTPERLAAARHVTASRRGRFAGPLDEVLAARGLRRTVAVSVPSHSAALL 237 Query: 237 SIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRL 296 +A +DL+G+VP L D L L + L LP++ + +++ + + Sbjct: 238 LVAGSDLVGLVPARLGRGLLDSLGLVALDLGLDLPTLTIAQAWHPRYEADAPHRWLRGHV 297 Query: 297 NES 299 ++ Sbjct: 298 RDT 300 >UniRef50_C9NXV6 Transcriptional regulator LysR family n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NXV6_9VIBR Length = 303 Score = 219 bits (558), Expect = 1e-55, Method: Composition-based stats. Identities = 48/299 (16%), Positives = 114/299 (38%), Gaps = 6/299 (2%) Query: 4 LYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKG 63 + ++ +L+ L + + I++ ++++A E +T SAVS +L++LR FND L IR G Sbjct: 1 MSNISDIELSQLRLLQIIFETKNLTQAGERAGLTQSAVSHTLKKLRHSFNDSLVIRQGNK 60 Query: 64 IAPTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCL 120 + T +L L + L E+ I + + + F I L+ L R Sbjct: 61 MVLTPRAESLQTSLGRWLNDFERNILFQEVFDPLTSDRTFYIATSDLVEHILAPHLSRHF 120 Query: 121 -RQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSN 179 R ++ I I A + + D I+ + +++ L+ + Sbjct: 121 GRIAPNIRIVFRKIEKRA--LASQIESGEVDFAISVIDSTHPNLMVRTLYRDDFVSVVRA 178 Query: 180 RHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIA 239 HP + + + + + ++ ++R + ++ ++ + + Sbjct: 179 GHPLLNSKIKAKDFCQYPHVLASTGNDNRGMVDDALEGLGLSRVMQYKVANFSSAPYIVE 238 Query: 240 VTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 +D + P + N+ L S + + ++ + ++ F +++ E Sbjct: 239 SSDAILTAPRTFVDLIAGKFNVSSFTPPVELESYAMKMYWHIKNKDDQANRWFREQIAE 297 >UniRef50_C6DDI5 Transcriptional regulator, LysR family n=4 Tax=Enterobacteriaceae RepID=C6DDI5_PECCP Length = 310 Score = 219 bits (557), Expect = 1e-55, Method: Composition-based stats. Identities = 59/302 (19%), Positives = 119/302 (39%), Gaps = 6/302 (1%) Query: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 M N D + DLNLLV F +Y+ S+S AA+ L++ AVS +L RLR F+DPLFIR+ Sbjct: 1 MEN--DFRGVDLNLLVTFLVLYRERSVSVAADKLHLGQPAVSGALARLRTLFDDPLFIRT 58 Query: 61 GKGIAPTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLI 117 G+ + PT L L L+ + + + + + +L+ Sbjct: 59 GQVMRPTARADYLATQLSPAFEQLQSVLGEPESFDPLTDSRAITLGMTDWVEIWLMPLLL 118 Query: 118 RCLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLIC 177 + L+ ++ + + + E L + DLVI+ + + L + + Sbjct: 119 KRLKANAP-HLRINLVATDPFLDVERLENDSVDLVISVASPQAGWLKQRALLSSGFRALW 177 Query: 178 SNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINS 237 + + E + + + + ++++ M R I + + Sbjct: 178 HPQQLALPSPVPLEVYSQQRHLLVTYRERAHGIVDDMLEKQGMTRTIYYTTPHFSALPGI 237 Query: 238 IAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLN 297 + T + VP +L + L + + LP+ L ++ +N + +++ Sbjct: 238 LQHTPSVATVPEKLATLWCQHYGLNDSPVPLDLPTYTLSALWHARQDSNPAIAWLYEQIA 297 Query: 298 ES 299 E+ Sbjct: 298 EA 299 >UniRef50_A0KIB7 Transcriptional regulator, LysR family n=2 Tax=Aeromonas RepID=A0KIB7_AERHH Length = 303 Score = 218 bits (555), Expect = 2e-55, Method: Composition-based stats. Identities = 64/296 (21%), Positives = 123/296 (41%), Gaps = 5/296 (1%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 +L+ DLNLLV+ + + + + +KAAE L ++ AVS++L RLR ++DPL IR+ +G+ Sbjct: 1 MNLRGVDLNLLVVLKALLEERNTTKAAERLAMSQPAVSRALARLRLLYDDPLLIRTPQGM 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 PT L L + L +EQT + ++ ++ + I + L+ L+ Sbjct: 61 EPTARAEALLLPLREILHDIEQTFSPPEQLDPAQFEGVLRIGAHTYVEYVMMPSLLARLQ 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 Q + + H + ++A+ E L +VI++ + +PL + H Sbjct: 121 QQAP-NLRIHMVPLNAD-YESQLDEGVISMVISKQDEVPGRFRRIPLFEDKLICAAHRSH 178 Query: 182 PRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVT 241 P E + + + + + + M R S L + Sbjct: 179 PLQGQVLCIESFAQAQHLLVAPRGSEGGIVDDLLAAHGMTRHTPLIVQSFLAAPFILPCA 238 Query: 242 DLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLN 297 LL P + L+L E + LP+ ++ + ++ NN + + F L+ Sbjct: 239 PLLLTSPARVLRPLMPLLDLVEYETRFALPTFEVSLIRHRRDDNNAMLNWFESELH 294 >UniRef50_C4I668 Transcriptional regulator, LysR family n=80 Tax=Proteobacteria RepID=C4I668_BURPS Length = 297 Score = 218 bits (555), Expect = 2e-55, Method: Composition-based stats. Identities = 46/287 (16%), Positives = 106/287 (36%), Gaps = 8/287 (2%) Query: 17 IFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTTGLNLHHH 76 + + ++++AA L ++ +VS L +LR F DPL + +G+ PT L Sbjct: 14 TLDALLSEHNVTRAAARLNLSQPSVSIHLAKLRDIFGDPLLLPGPRGMRPTARADELREP 73 Query: 77 LEKNLRGLEQTIN---IVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSVEIECHDI 133 L + L L + ++ + + + + + + LR ++ + Sbjct: 74 LRRALETLGRAVSPGAPFDPAASAHTWRVAASDYSESTVVLPALNGLR-AAAPGTRLAVV 132 Query: 134 LMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRITDNSTYEQI 193 + DL ++ L T R L+ HPR+ T Q Sbjct: 133 ETVPSRIAKQAEQGDIDLAFHITECAPGNLRHRALFTERYVLVGRAGHPRLKRRPTLAQF 192 Query: 194 MAEEFTQLISKSAGV-DDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLGIVPYELY 252 + + G + + + R++ L +++++A +DL+ ++P L Sbjct: 193 CKLDHVIVSPDGGGFQGGTDQALAKLGLARRVVLSVPHFLFMMSAVANSDLVAMMPSRLV 252 Query: 253 NSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNES 299 RD L+ ++ +P ++ + +++ S + + + S Sbjct: 253 ---RDSRALQVVEPPVDVPGFRMAMLWHERSHRDPAHQWLREHIAAS 296 >UniRef50_A6ARN3 Transcriptional regulator, LysR family n=4 Tax=Vibrio RepID=A6ARN3_VIBHA Length = 305 Score = 218 bits (555), Expect = 2e-55, Method: Composition-based stats. Identities = 66/301 (21%), Positives = 127/301 (42%), Gaps = 4/301 (1%) Query: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 M + + DLNLLV F +Y++ S+S AAE +++ SA+S SL RLR F+DPLF R Sbjct: 1 MKDDIQWRNIDLNLLVTFSYLYRYRSVSLAAEKSFVSQSAMSHSLSRLRVLFDDPLFERK 60 Query: 61 GKGIAPTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLI 117 G +APT + + L + + + + I +L Sbjct: 61 GHKMAPTEHAHYIAPTVHHLLDSIAKDLLTKSAFLPENYAGVCRIGLTDYAEFIFAPLLY 120 Query: 118 RCLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLIC 177 +R+ + E + I ++ N + H K D++I MPV+ + L+T ++ +C Sbjct: 121 DEIRKRAP-EAQISFINVNRSNYVAITEHDKLDVIIGSMPVLDDNFESQYLYTEKHVCLC 179 Query: 178 SNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINS 237 R + + E + + + ++ E ++RK++ + LTI N Sbjct: 180 DKRVLKGETQLSIHAFANIEQALVSPDGSLSTQVDKKLAEHGLSRKVTVASRNFLTIRNL 239 Query: 238 IAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLN 297 + +L+ IVP ++ + +L ++ + + + ++ S N + Sbjct: 240 LKQRELVAIVPEKMAQAEGFSDDLVSVQPPIAVADFDIAMLWHTSRNNEDKGIWLRQLVA 299 Query: 298 E 298 E Sbjct: 300 E 300 >UniRef50_A5VEA0 Transcriptional regulator, LysR family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5VEA0_SPHWW Length = 309 Score = 218 bits (555), Expect = 2e-55, Method: Composition-based stats. Identities = 64/306 (20%), Positives = 135/306 (44%), Gaps = 14/306 (4%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 L+ DLNLL+ + ++ ++++AAE + I+ +S +LQ+LR F+DPL R G+ + Sbjct: 1 MHLRGLDLNLLIALDALFTEKNVTRAAERINISQPGMSAALQKLRWHFSDPLLERVGRRM 60 Query: 65 APTTTGLNLHHHLEKNL---RGLEQTINIVNKSELKKNFIIYGPQL-ISCSNNSMLIRCL 120 T G L + + L R L + + ++ F I +L R Sbjct: 61 ELTVRGRALADPVREILIKVRDLTDKPEEFDPATARRVFRIGATTFCSDILAAPLLCRIE 120 Query: 121 RQDSSVEIECHDILMSAENAEELLVHRKADLVIT-QMPVISRSV------ICMPLHTIRN 173 R ++ ++ D+ A + LV + D IT ++S V + L T Sbjct: 121 RIAPNISVQFEDL---ATDTVHRLVDGQLDFAITISARILSDEVNLDSSLSSLDLFTDAF 177 Query: 174 TLICSNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLT 233 L+ S ++ R+ D T++Q+ + + + + ++ +I + Sbjct: 178 VLVTSRQNSRVGDAVTFDQLCELPYIETRFGNVIAGISEQMWRQQPKQPQIRAWLPNFQL 237 Query: 234 IINSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFI 293 +++++ TD++ IVP L + D N++ + + +P+I+ + +++ + + S F Sbjct: 238 TLDTVSHTDMVAIVPLHLAQLHGDRYNVRTLPVPVEMPTIEERLFWHQRNDQDAGHSWFK 297 Query: 294 DRLNES 299 L E+ Sbjct: 298 GLLQET 303 >UniRef50_C5CZA2 Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus S110 RepID=C5CZA2_VARPS Length = 317 Score = 217 bits (553), Expect = 4e-55, Method: Composition-based stats. Identities = 56/299 (18%), Positives = 116/299 (38%), Gaps = 8/299 (2%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 ++ DLNL ++F+ IY S++ A + L +T SAVS +L+R+R +FND LF+RS G+ Sbjct: 1 MNINSIDLNLFLVFQAIYATRSVTLAGDRLGMTQSAVSNALKRMRERFNDALFVRSADGM 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 PT L +E+ + L Q ++ + F I + LI R Sbjct: 61 VPTPVAERLIAPIEEGIACLVQAVDQGRTFEPETSSRIFRIAVNDIGQLVMVPELISVAR 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 + + + +S A + ++H + D+ + + S L ++ S Sbjct: 121 GIAP-GVRFETVDVSVAEARQRMLHGQIDVALGSWEAMGPSFYQQRLFDETFVVLMSKAS 179 Query: 182 PR-ITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFM--NRKISFRGSSLLTIINSI 238 P + + +A E + +Q ++ R++ + L + + + Sbjct: 180 PLGTRERIELDDYLAAEHIAYRPQGTTDSQLQQTLERAGALDRRRVVLTAAHSLGLTSIV 239 Query: 239 AVTDLLGIVPYELYN-SYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRL 296 A + LL P L +L + + ++ +++ + + + Sbjct: 240 ATSGLLLTAPARLAKAMVASRADLHSVDAPFEVRPFEIRQQWHERFHQDSGNRWLRELI 298 >UniRef50_Q7MEL0 Transcriptional regulator n=18 Tax=Gammaproteobacteria RepID=Q7MEL0_VIBVY Length = 289 Score = 217 bits (553), Expect = 4e-55, Method: Composition-based stats. Identities = 63/290 (21%), Positives = 111/290 (38%), Gaps = 16/290 (5%) Query: 8 KKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPT 67 DLNL+ F + ++ S +KAA+ L +T AVS S++RL N LF++ G+GI PT Sbjct: 3 NAMDLNLIQTFLLVAEYQSYTKAADHLGLTQPAVSASIKRLEKVVNKQLFVKKGRGIEPT 62 Query: 68 TTGLNLHHHLEKNLRGLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSVE 127 + L + + ++ I+ + F + + + S + Sbjct: 63 ASAYQLIPKFHQAISIVDNAISE------RSAFQVCCSETLLHSLTPI----------EH 106 Query: 128 IECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRITDN 187 H+ E + +K DL+I + S + + +IC HPRI Sbjct: 107 TVFHESPPEKYLLFEQIRQQKMDLIIDTVITKDSSFVIENAYQEPAVVICRQGHPRIQGQ 166 Query: 188 STYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLGIV 247 + Q E K + +E R + +SL ++ +A D LG+V Sbjct: 167 LSKAQFYQESHCLFSGKWNNTTGFEQLANEPIEERIVEIVTTSLSSMALYVAQRDCLGVV 226 Query: 248 PYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLN 297 + L L+ + + I Y+K LNN R +++ Sbjct: 227 SRSFALKWSKALKLQILDCPIAISLIPYKFIYHKRELNNPAHQRLREKIK 276 >UniRef50_Q46YJ7 Transcriptional regulator, LysR family n=5 Tax=cellular organisms RepID=Q46YJ7_RALEJ Length = 394 Score = 217 bits (553), Expect = 4e-55, Method: Composition-based stats. Identities = 47/299 (15%), Positives = 103/299 (34%), Gaps = 4/299 (1%) Query: 4 LYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKG 63 ++ D LL + + S+++ A L + A+S +L+RLR D + +R G Sbjct: 80 MHGRDHLDTYLLRVLHTLLTEQSVTRTAVRLGQSQPAISNTLKRLREITGDAILVRGKSG 139 Query: 64 IAPTTTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCL 120 + PT G L E++L +++ + + + F + P + ++ + Sbjct: 140 MVPTERGRELLELAEQSLAAMDRIARPPQQFDPATTTRTFHLGAPDYLDAFFLPNIVERV 199 Query: 121 RQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNR 180 R+ + + S+ + E L + D+VI + PL + + Sbjct: 200 RRLAPGAKLFVHPMTSSSDFLEDLEQGQLDIVIGNWLSPPEHLHISPLFDDEVVCMLGAQ 259 Query: 181 HPRITDNSTYEQIMAEEFTQLIS-KSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIA 239 HP T + + S I + E+ R I + + Sbjct: 260 HPLARKGLTLKHYLEMPHLAPAPYASMQRSMIDQALAEQGYKRNIQVTLPYFGLVPYVLM 319 Query: 240 VTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 TD++ + Y +L ++ + P ++ Y +++ + E Sbjct: 320 KTDMVFTTGRQFAAHYAQYLPIRMVPSPVTFPRMRFYQLWHERCHAAPDVMWMRRMIAE 378 >UniRef50_B5XRQ2 Transcriptional regulator, LysR family n=4 Tax=Klebsiella RepID=B5XRQ2_KLEP3 Length = 307 Score = 217 bits (553), Expect = 4e-55, Method: Composition-based stats. Identities = 61/299 (20%), Positives = 120/299 (40%), Gaps = 4/299 (1%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 D + DLNLL + +Y+ S+++ AE L++ A+S +L+RLR F+DPLF+RS +G+ Sbjct: 7 NDFSRIDLNLLTVLMVLYREASVTRTAEVLHLGQPAISGALKRLREMFDDPLFVRSARGM 66 Query: 65 APTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 PT L L+ + L + + ++ F I L+ L Sbjct: 67 LPTPRAQALMTDLQPLMENLHSAMFGAGEFVPARAQQLFRIGLSDWSEHWLMPQLLPGLM 126 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 Q++ + I +LL + D+ ++ V+ P+ T+ T + S + Sbjct: 127 QEAP-GVSLQSIAADPFQVRQLLEEERIDVAVSVNKQSRGEVVSEPVMTMGVTTLWSPQQ 185 Query: 182 PRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVT 241 + +A E + + G +I ++ + + R++ F + T + Sbjct: 186 IPCRGPLSVSDFVAWEHVMVAYRETGHGEIDRQLASQGLARRVRFATQNFSTFPLLLTTL 245 Query: 242 DLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 L VP L ++ L+ P L I +K + + + +L ++ Sbjct: 246 PLFATVPQGLAQRWQAQHALRADAPPVTYPEFTLCILRHKRRAQDPALNWLVTKLKQAM 304 >UniRef50_B2VHH8 Transcriptional regulator, LysR family n=1 Tax=Erwinia tasmaniensis RepID=B2VHH8_ERWT9 Length = 302 Score = 217 bits (552), Expect = 4e-55, Method: Composition-based stats. Identities = 69/293 (23%), Positives = 129/293 (44%), Gaps = 5/293 (1%) Query: 10 FDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTT 69 DLNL+ +F IY+ S+S AA L+IT + S +L RLR + ++ LF RS KG+ PT T Sbjct: 5 MDLNLVRVFIAIYETRSVSGAAARLFITQPSASYALARLRVETDNELFKRSRKGMLPTPT 64 Query: 70 GLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSV 126 L+ +K++ G+E+ + + F + L L++ LR + Sbjct: 65 ANQLYEVFKKSISGIEKAVADTRSFSPETSFHRFRLALSDLGELLLLPRLVKHLRTVAP- 123 Query: 127 EIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRITD 186 + I + +E L+ D + + R + +N+HPRI D Sbjct: 124 NVRLEVIPVEMHKMDEWLLTGHIDAALCSRNERISLAQRDRIMDERYVCLLNNQHPRIGD 183 Query: 187 NSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLGI 246 T + E+ + + S+G ++ I E R+I+ + IA ++LL + Sbjct: 184 TLTLPAWLNEQHIMVSA-SSGHYMVEERIKEYGFERRIALEVPHFAALGELIASSELLVL 242 Query: 247 VPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNES 299 +P+ Y N + ++L LP++++Y+ + + + F + L + Sbjct: 243 LPFSAAKVYAARGNGRIVELPFELPNLEVYLYGHPEIGDITAKTWFYNTLKNA 295 >UniRef50_B7VQ45 Transcriptional regulator n=8 Tax=Vibrionales RepID=B7VQ45_VIBSL Length = 311 Score = 217 bits (552), Expect = 4e-55, Method: Composition-based stats. Identities = 67/311 (21%), Positives = 127/311 (40%), Gaps = 16/311 (5%) Query: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 M ++ L K D+NLL+ + + S+SK AE L+++ SAVS+ L +LRA F+DPLF R Sbjct: 1 MVDVKSLLKCDMNLLLCLHVLIEERSVSKTAERLFLSQSAVSKQLTKLRALFDDPLFERE 60 Query: 61 GKGIAPTTTGLNLHHHLEKNLRGLEQTI--NIVNKSELKKNFIIYGPQLISCSNNS-MLI 117 KG+ PT L L + + L +E+ + + + ++ F I + + + Sbjct: 61 SKGLFPTPKALALAPKIHQILLQIEKLTVPEVFDPKDSERTFTIDLVETAYTAIYPHFMP 120 Query: 118 RCLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPV----------ISRSVICMP 167 L + I + + ++ + L+ R+ D I + I + + Sbjct: 121 TALADAPHITI---NSSTWSSDSFKRLLKREVDFGIGIFELDERASTHVQCIPDELDYVE 177 Query: 168 LHTIRNTLICSNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFR 227 L + + N HP + + + QL++ AG + ++ + + + Sbjct: 178 LCLDYSVCLMRNDHPALQEEWNLGTFLKYRHIQLVTGGAGDWLLMEVLNSKQLEINKAAN 237 Query: 228 GSSLLTIINSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNL 287 S + + I +DLL PY Y D L + L L++ ++K + Sbjct: 238 VSDITSAIKLCKQSDLLMCYPYNSVRDYIDSGELVMKPVPVDLVPGGLFLLWHKYFDSEP 297 Query: 288 VFSRFIDRLNE 298 D + E Sbjct: 298 SHKWLRDLIIE 308 >UniRef50_B4RWU1 Transcriptional regulator n=2 Tax=Alteromonas macleodii RepID=B4RWU1_ALTMD Length = 347 Score = 217 bits (552), Expect = 5e-55, Method: Composition-based stats. Identities = 52/280 (18%), Positives = 108/280 (38%), Gaps = 3/280 (1%) Query: 16 VIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTTGLNLHH 75 +IF+ I +I++AA+ L +T AVS +L R+R +ND LF++ G+GI PT+ NL Sbjct: 1 MIFDAIMTEGAITRAADRLSMTQPAVSNALSRMRTAWNDELFVKDGRGIQPTSFAKNLWS 60 Query: 76 HLEKNLRGLEQTINI--VNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSVEIECHDI 133 ++ L LE +N N + K+ F I I L + + ++ I H I Sbjct: 61 QIQGPLGELEVAVNPTDFNPASAKRTFRIAATDNIVSMVWGPLRKVIENEAP-GINIHAI 119 Query: 134 LMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRITDNSTYEQI 193 +++L +A+L ++ + + ++ HP + E Sbjct: 120 PNYDMETDKILKDAEAELTFSKYQEPGSVIRAEHVLDPSWVVVMRPDHPLAKSQLSLEDF 179 Query: 194 MAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLGIVPYELYN 253 +A + + + + R+++ + + ++L+ + P + Sbjct: 180 VAADHLLVSVTGDVSGPTDQVLANLGLRRRVAMSVNQFHNATPLLKESNLICVAPSLVME 239 Query: 254 SYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFI 293 L + + S L + ++K + Sbjct: 240 KEIFSGELAVFETPIEIVSSPLSVMWHKRQDQDAGLQWLR 279 >UniRef50_Q085G5 Transcriptional regulator, LysR family n=1 Tax=Shewanella frigidimarina NCIMB 400 RepID=Q085G5_SHEFN Length = 318 Score = 217 bits (552), Expect = 5e-55, Method: Composition-based stats. Identities = 76/297 (25%), Positives = 128/297 (43%), Gaps = 4/297 (1%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 L DLNLL +F + QH SI++AAE L +T S+VS ++ RL+ LFIR G+GI Sbjct: 15 NKLPMLDLNLLRVFCTVCQHSSITRAAEQLGLTQSSVSNAINRLKHALECELFIRIGRGI 74 Query: 65 APTTTGLNLHHHLEKNLRGLEQT---INIVNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 PT G ++ + ++ L +EQT I + S K+ F IY + + L L Sbjct: 75 EPTAIGTHIFNTVQPMLDTIEQTLMGIKAFDPSTSKRVFTIYANEAVIDLLQPQLDNALA 134 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 S V + + + + L +K DLVI +P + C + R + H Sbjct: 135 HLS-VRVVLRNSPVFEAEQFQDLQMQKVDLVIDIVPPKLKMFSCQKVAQERIVCVVRQGH 193 Query: 182 PRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVT 241 P I ++ + + A E + + + R + SSLL++++ I+ + Sbjct: 194 PVIKNHLSRDDYFAAEHVMYRFHRDNMRVADIIANAPLPQRTLYSEQSSLLSMLSLISKS 253 Query: 242 DLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 + +GI PY +Y + L ++L I LY + + + E Sbjct: 254 NAIGIAPYIFTQNYAELFKLTLLELPFETRPIDLYSIWPTKHALDKSCIWLRKTIVE 310 >UniRef50_Q0VH46 Putative LysR type regulator n=3 Tax=Proteobacteria RepID=Q0VH46_9PSED Length = 308 Score = 216 bits (551), Expect = 7e-55, Method: Composition-based stats. Identities = 61/293 (20%), Positives = 120/293 (40%), Gaps = 4/293 (1%) Query: 11 DLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTTG 70 DLNLL FE +++ S+S AA++L +T AVS SL+RLR ++ D LF G+ + PT Sbjct: 11 DLNLLFAFEALWRDHSVSIAADNLGVTQGAVSSSLKRLRQEYGDRLFTVVGRRMEPTPFA 70 Query: 71 LNLHHHLEKNLRGLEQTIN---IVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSVE 127 + + L + L + + + + +K F + + +++ L+ + + Sbjct: 71 VQIAPTLLEALDLVREAQSRALEFSPQHCRKVFTVRTRDIGEAVCLPTILKMLQTQAPMS 130 Query: 128 IECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRITDN 187 + + S E L + DL I +P + + + + HP Sbjct: 131 -RINTVASSVEETLIGLSTGRIDLAIGYLPTLKTDIHRTIVSSQHYVCALRRGHPLADAE 189 Query: 188 STYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLGIV 247 T E+ +A++ + + G ++ + E I R L+ + + +D+L +V Sbjct: 190 LTLERFLAQQHLLVETGGTGHVLLERALIEAGARHNIGVRIPQYLSAPHLLLESDMLWVV 249 Query: 248 PYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 P L + F L L LP + + ++ + F + L + Sbjct: 250 PNVLGKTLSRFFPLLLKPLPLVLPEFDIALYWHDRFHRDPQNKWFREMLAAAL 302 >UniRef50_A3RSL5 Transcriptional regulators, LysR family n=4 Tax=Ralstonia solanacearum RepID=A3RSL5_RALSO Length = 304 Score = 216 bits (550), Expect = 8e-55, Method: Composition-based stats. Identities = 65/297 (21%), Positives = 123/297 (41%), Gaps = 9/297 (3%) Query: 8 KKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPT 67 K+ DLNLL +F+ IYQ +++ AA+ IT A+S +L RLR F DPLF+ S G+ PT Sbjct: 4 KRLDLNLLGVFQAIYQTRNVTLAAKRHNITQPAMSNALARLREVFADPLFVPSPYGMRPT 63 Query: 68 TTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDS 124 L +++ LR +EQ + + + + + F ++ + L+ LR + Sbjct: 64 PYAQQLAVPIDRALREVEQALAMSKGFDPASSDREFRMHLTDFAQVAFLPALLERLRALA 123 Query: 125 SVEIECHDILMSAENAEELLVHRKADLVITQMPVIS-RSVICMPLHTIRNTLICSNRHPR 183 + ++ E L + D +M + + V L R ++ HP Sbjct: 124 P-RVVIRVEALAEETILPALDEGRLDFAFGRMSKAAGQGVGRYTLFKDRYAVLMRAGHPL 182 Query: 184 ITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDL 243 + + A + + +G I+ + + I+ R S L + + +DL Sbjct: 183 AGHALSRKDFAAAGQALICT--SGHRAIEDVLVKMGA--HIALRLPSFLVVSRIVETSDL 238 Query: 244 LGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 + IVP L L +P+ + + +++S + + +L + F Sbjct: 239 MVIVPARLAEQCAATGLFHTAALPVAMPAFDVSLFWSESRSADPAHAWMRGQLQQLF 295 >UniRef50_A5V6I2 Transcriptional regulator, LysR family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V6I2_SPHWW Length = 301 Score = 216 bits (550), Expect = 8e-55, Method: Composition-based stats. Identities = 70/294 (23%), Positives = 120/294 (40%), Gaps = 6/294 (2%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 + DLNLLV F+ + +H S+S AAE+++++ SA+S +L RLRA F+D L + G+ + Sbjct: 3 FQGLDLNLLVAFDTLAEHRSVSLAAEAMHLSQSAMSAALARLRAYFDDELLVPRGRTLVL 62 Query: 67 TTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQD 123 T L + L + TI + E K+ F I + +R Sbjct: 63 TPRAEQLAPEVRDTLLRIHATIAHPAAFDPIETKREFTIVASDYVQAVLLEPFMRKAAHH 122 Query: 124 SSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPR 183 + + + +S + +E DL+I VI L LICS HP Sbjct: 123 AP-GMRFRILPISQQGIDEF-KRGVIDLIIVADSVILPEHPSQKLFEDEAKLICSADHPT 180 Query: 184 ITDNSTYEQIMAEEFTQLI-SKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTD 242 I D + EQ + + ER + R+I + + + ++ T+ Sbjct: 181 IGDEISMEQFGTVGHVTTSLHHHRPGSLFDLMLLERSIARRIEIQVPAFSMMAGAVVGTE 240 Query: 243 LLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRL 296 + I+ L SY L +K + L LP I+ I ++ + ++ L Sbjct: 241 RVAILHARLATSYARILPIKLLSLPFALPPIREVIQWHALRQRDRGLQWLLEAL 294 >UniRef50_Q2BJ61 Transcriptional regulator, LysR family protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BJ61_9GAMM Length = 302 Score = 216 bits (550), Expect = 1e-54, Method: Composition-based stats. Identities = 60/302 (19%), Positives = 116/302 (38%), Gaps = 8/302 (2%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 +L+ DLNLLV+ + + +SKAAE L ++ AVS++LQRLR DP+ +R+G G Sbjct: 1 MNLRSVDLNLLVVLQALIDEQHVSKAAERLNMSQPAVSRALQRLRTTLQDPILVRTGSGY 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTI--NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQ 122 + + L L L ++ + + + + + G L +IR LR+ Sbjct: 61 DLSARAVVLREQLSHVLHEVQAIMQPEQFDPMQAEGVLKLTGLDLELILLMPDVIRMLRE 120 Query: 123 DSSVEIECHDILMSAENAEELLVHRKADLVI-TQMPVISRS-VICMPLHTIRNTLICSNR 180 + + + E+ ELL I P + + + + Sbjct: 121 KAP-NLRVEVVPQLPEH-FELLERGDVHFTITGLFPQTHHDQYRRIEIARTGHVCVMDRD 178 Query: 181 HPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAV 240 +P + + + G + + E RK+ R ++ +++ Sbjct: 179 NPLAKGELSLQDYANASHGLVSITGKGPGMMDDALGEFGYKRKVMLRLANFMSVAQFCQQ 238 Query: 241 TDLLGIVPYELYNSYRDFLNLKEIKLE--HPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 +DL+ +P + +L L LP + LY+ ++ ++ + S L E Sbjct: 239 SDLIFTLPKIMATHLAQGTSLVLRPLPKEFALPEVVLYMYWHDRYHHDPMCSWVRAELAE 298 Query: 299 SF 300 F Sbjct: 299 IF 300 >UniRef50_B8IVY8 Transcriptional regulator, LysR family n=4 Tax=Proteobacteria RepID=B8IVY8_METNO Length = 341 Score = 215 bits (549), Expect = 1e-54, Method: Composition-based stats. Identities = 51/313 (16%), Positives = 116/313 (37%), Gaps = 24/313 (7%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 L + DLNL+ +F+ + + +++A +SL ++ SAVS L+RLR D LF+R+ +G+ P Sbjct: 12 LNRLDLNLIRLFDAVMRERHVARAGQSLGLSQSAVSHGLRRLRTLIGDDLFVRTVQGMEP 71 Query: 67 TTTGLNLHHHLEKNLRGLEQTINI--VNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDS 124 T L + + L +E I + + + F + I+ L+R ++ Sbjct: 72 TPRALAMAVQVRDALTAIEGAIGPQRFDPASSTRQFRLAATDHITAVVAPALMRTFETEA 131 Query: 125 SVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRI 184 + + + + + D+V+ I + L R+ L+ + HP Sbjct: 132 PLA-SILIRPATRIDLTMQVDLGQIDIVVGIFSQIPHRLHARTLFEDRDVLVTAPDHPEA 190 Query: 185 TDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNR---------------------K 223 + + + + + ER + R + Sbjct: 191 GGATDIRTLARDPLMVVTVGGTEDGLPDGRLSERGLTRQTEMFDRDALNRAFRAAGLVPR 250 Query: 224 ISFRGSSLLTIINSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSS 283 +S L + + +A + + IVP L + + + ++ + + +++ Sbjct: 251 LSVLQPHFLAVPSLLADSRRVAIVPASLAHGFEAAGVARVSMPPWEPRTMAVQMVWHERW 310 Query: 284 LNNLVFSRFIDRL 296 + + + L Sbjct: 311 RQDPAHAWLREAL 323 >UniRef50_Q210Z5 Transcriptional regulator, LysR family n=2 Tax=Alphaproteobacteria RepID=Q210Z5_RHOPB Length = 301 Score = 215 bits (549), Expect = 1e-54, Method: Composition-based stats. Identities = 49/294 (16%), Positives = 120/294 (40%), Gaps = 10/294 (3%) Query: 10 FDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTT 69 DLNLLV + + S++ AA + ++P A+S+ L R+R NDP+ +R+G+G+ T Sbjct: 10 LDLNLLVTLDALLSEGSVAGAANRMNLSPPAMSRQLARIRHLMNDPVLVRAGRGLVATPR 69 Query: 70 GLNLHHHLEKNLRGLEQTIN---IVNKSELKKNFIIYGPQLISCSNNSMLIRC-LRQDSS 125 + + + ++ E + ++ + +++ F I + + ++ ++Q + Sbjct: 70 AEAVRAQVRQLVQDAEGLVRGNADLDPATIERTFTIRSSDGFVGTFGAAIVELVVQQAPN 129 Query: 126 VEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRIT 185 + + + L + DL I + + + L R + HP Sbjct: 130 ARLRF---VGEGNEDVDSLRDGRVDLDIGVIDGMGPEIRLQTLFRDRYIGVVRADHPLAQ 186 Query: 186 DNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLG 245 + T E +A + + + + + M R +S +++ ++ ++ +D + Sbjct: 187 ETVTIENFVAYPHVSVSRRGRFEGPVDTALALQGMRRTVSVAVANVADGLSIVSRSDHIV 246 Query: 246 IVPYELYNSYRDFLNLKEIK-LEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 ++P + YR + E+ + LP I + +++ + + E Sbjct: 247 LLPGRIAAWYRRDFHGFELPVVTDELPPISI--AWHPRFEKDAAHRWLRTCVRE 298 >UniRef50_C9PC13 Transcriptional regulator LysR family n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PC13_VIBFU Length = 310 Score = 215 bits (548), Expect = 1e-54, Method: Composition-based stats. Identities = 58/300 (19%), Positives = 111/300 (37%), Gaps = 8/300 (2%) Query: 4 LYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKG 63 + DLNL+ +F +Y+ S+ A+ L I+ SA S SL RLR++ ND LFIR Sbjct: 1 MKKFDNIDLNLMKVFYYVYETQSVQMTADRLNISQSACSHSLARLRSRLNDELFIRINGK 60 Query: 64 IAPTTTGLNLHHHLEKNLRGLEQTINIVNKSEL---KKNFIIYGPQLISCSNNSMLIRCL 120 + PT L ++ L L +N + + +F+I G + L L Sbjct: 61 MIPTNQAEQLAQSIQPALELLYSGLNTATPFDPAVGQHHFVISGYDFSAWCVMPTLTAYL 120 Query: 121 RQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVI--SRSVICMPLHTIRNTLICS 178 + I + + E L + DL + S + + + + Sbjct: 121 AEH-FPNITVRLVQSDKQIPTEHLESGEIDLSLGFDHEAEQSNHIGNAIWQSGQYCIAMD 179 Query: 179 NRHPRI--TDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIIN 236 N+H + + +A + + + + + R+++ S+L+ Sbjct: 180 NQHDALMAGRPLDLDTFLAYPHVLVTPWNEPRGIVDATLGKLNKKRQVAVTLPSVLSAPF 239 Query: 237 SIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRL 296 + T+ P + D L L + P+P + + ++K + + I RL Sbjct: 240 LLKGTNYFLAAPESYLETLADTLQLAFVAPPIPIPQYHIKLYWHKVREKDPKVNWLIHRL 299 >UniRef50_A9BZQ9 Transcriptional regulator, LysR family n=1 Tax=Delftia acidovorans SPH-1 RepID=A9BZQ9_DELAS Length = 323 Score = 215 bits (548), Expect = 1e-54, Method: Composition-based stats. Identities = 55/305 (18%), Positives = 120/305 (39%), Gaps = 15/305 (4%) Query: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 MAN Y DLNLL+ + + S+++AA ++++ A+S +L R+R F DP+ +R+ Sbjct: 1 MANTY-----DLNLLIALDALLSTGSVTQAAGRMHLSTPAMSHTLARIREAFGDPILVRA 55 Query: 61 GKGIAPTTTGLNLHHHLEKNL---RGLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLI 117 G+ + PT L L + L R L+ ++ + L++ F++ P+ I+ + L Sbjct: 56 GRSLVPTPRALALAEPVRALLAQARALQDPVDAGGLAGLRRRFVVRAPEGIAVVFGASLS 115 Query: 118 RCLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLIC 177 R L ++ + + L L + DL + + + + + Sbjct: 116 RAL--EAEMPLASLQFLPETHADPGALREGRIDLDVGSFRSMDPETESLVISEQTLVGVV 173 Query: 178 SNRHPRIT-----DNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLL 232 HP + + Q A + + + ++ + R+++ S Sbjct: 174 RAGHPLLKSARKSQRPSAAQFAAARHVGITQRPGESSPVDAALEALGLQRQLALLVPSSF 233 Query: 233 TIINSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRF 292 + + + + TDL+ VP + L L L + + ++++ + Sbjct: 234 SALIAASRTDLVACVPTRTAHGMAASLGLVVFALPIEVQVQPMRMAWHPRHQADPAHQWL 293 Query: 293 IDRLN 297 D + Sbjct: 294 RDCIQ 298 >UniRef50_Q5E7C7 Transcriptional regulator, LysR family n=5 Tax=Vibrionaceae RepID=Q5E7C7_VIBF1 Length = 330 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 62/301 (20%), Positives = 115/301 (38%), Gaps = 4/301 (1%) Query: 2 ANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSG 61 N + K DLNLLV F + + S+S AA L++ SA+S SL RLR +DPLF R G Sbjct: 21 MNEINWKAVDLNLLVAFSTLMETKSVSLAANKLFVGQSAMSHSLSRLRELLHDPLFERQG 80 Query: 62 KGIAPTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIR 118 + PT + L+ + K L+ + I + SE F I + + Sbjct: 81 HQMIPTAKAIQLYPLVNKVLQTISGDILKVDTFEASEFTGTFKIGMTDYAELLFAADIFD 140 Query: 119 CLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICS 178 + Q + + + N ++ DLVI M + L+T ++ + Sbjct: 141 AIHQLAP-NAQLCFTTVDKANYQDRFDSEPLDLVIGSMKPELKEFQYQTLYTEKHVCMWD 199 Query: 179 NRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSI 238 + + T + ++ + A + E+ + R +S LTI + + Sbjct: 200 GQRHLFSSPITLDDYISLPHALVSPDGALKTGVDKELKALGVGRSVSVASKHFLTIRHLM 259 Query: 239 AVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 DL+ +VP + L + + + + + + N + + L + Sbjct: 260 KKRDLICVVPELMAQLDLFSEKLVHSEPPINVGEFDIQLIWQTRNKENKRYQWLKELLIQ 319 Query: 299 S 299 + Sbjct: 320 T 320 >UniRef50_D0LUZ7 Transcriptional regulator, LysR family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LUZ7_HALO1 Length = 306 Score = 215 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 58/294 (19%), Positives = 111/294 (37%), Gaps = 9/294 (3%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 + D NLLV + + + S+++AA + IT SA+S +L RLR DPL +R+G+ + Sbjct: 3 IYGIDANLLVSLDALLREASVTRAAHRVGITQSAMSHALGRLRDHLGDPLLVRAGRNMVL 62 Query: 67 TTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLR-Q 122 T +L + + + + + L++ F + + R LR + Sbjct: 63 TAKAESLAPRVSVLVEEMSRVFAPDEEFEPAALRRGFALRATDHAQFVLMPEVDRLLRAE 122 Query: 123 DSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHP 182 V++ + + A L ++DL + + L T R + HP Sbjct: 123 APGVDL---VVTALSGGAVAPLRQAQSDLTLGTFSDHPSDIHSQALLTDRFVCLVRGDHP 179 Query: 183 RITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTD 242 I Q A + GV + + E + R+IS +L IA +D Sbjct: 180 AIARGLGVAQYAAMTHIHVGPAQLGV--VDRVLGELGIARRISRVVPHVLVAPLLIADSD 237 Query: 243 LLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRL 296 + + L + ++ PLP L +++++ + D + Sbjct: 238 AVVTMSERLAQRALPGAEVAMLEPPVPLPPCTLSMAWHERHDADPAHRWLRDAV 291 >UniRef50_D2B6V0 LysR family transcriptional regulator n=5 Tax=Actinomycetales RepID=D2B6V0_STRRD Length = 313 Score = 215 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 58/295 (19%), Positives = 117/295 (39%), Gaps = 7/295 (2%) Query: 10 FDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTT 69 DLNLLV + + + S++ AA L + A+S++L R+R Q NDP+ +R+G+ + PT Sbjct: 2 LDLNLLVALDALLEEGSVAGAAARLNTSAPAMSRTLGRIRRQLNDPVLVRAGRHLVPTPR 61 Query: 70 GLNLHHHLEKNLRGLEQTINIVN---KSELKKNFIIYGPQ-LISCSNNSMLIRCLRQDSS 125 L LH + +R + + L + F + L+S +++ ++ Sbjct: 62 ALELHAAVRDLVRQASALLVPAGDPAPATLARTFNLQASDMLLSALAAPLVLAVGQRAPG 121 Query: 126 VEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRIT 185 V + L L + DL I + + PL T R + HP + Sbjct: 122 VVLRF---LPDTLEGTSALREGRVDLEIGVIDHAAPETCVEPLGTGRIVGMAREDHPLVI 178 Query: 186 DNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLG 245 T + + + I + R + R+ + SS + +DL+ Sbjct: 179 KGVTLRRFADAKHVGVSRHGRLHGPIDDLLAARGLRRRTAVTVSSHSMALLLARQSDLVC 238 Query: 246 IVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 + P + L L+ ++ LP +++ ++++ + + D++ E Sbjct: 239 LAPAPADDDLPAALGLRAFEIPLELPEVEVAMAWHPRNDADGGQRWLRDQVREVL 293 >UniRef50_C7RKX8 Transcriptional regulator, LysR family n=20 Tax=Proteobacteria RepID=C7RKX8_9PROT Length = 310 Score = 214 bits (545), Expect = 3e-54, Method: Composition-based stats. Identities = 59/297 (19%), Positives = 110/297 (37%), Gaps = 10/297 (3%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 + DLNLLV + + S+++AA+ L ++PSA+S++L RLRA DPL +R+G+G+ P Sbjct: 1 MSTADLNLLVTLDVLLAEGSVARAAQRLRLSPSAMSRALARLRATTGDPLLVRAGRGLVP 60 Query: 67 TTTGLNLHHHLEKNLRGLEQTINIVNKSELKKNFIIY----GPQLISCSNNSMLIRCLRQ 122 T L L + ++ E + V K +L++ +Y + ++ R Q Sbjct: 61 TPRALELREQVGPLVQAAEAALRPVEKLDLERLVRMYTLRTSEGFVENFGPDLIARVAEQ 120 Query: 123 DSSVEIECHDILMSAENAEELLVHRKADLVITQM-PVISRSVICMPLHTIRNTLICSNRH 181 V + + + L DL + + + L R + H Sbjct: 121 APGVRLCF---VQKSNKNSAPLRDGSVDLETGVVGKATAPELRVQALFRDRFIGVVRMGH 177 Query: 182 PRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVT 241 P T + + + + I + + R+I S T + + Sbjct: 178 PLSQGEMTPHRYATGKHILVSRRGFDRGMIDEALKPLGLERQIVTIVSGFSTALVLARAS 237 Query: 242 DLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 DL+ VP R + L P I + + ++ + + E Sbjct: 238 DLIASVPERHTAKLR--AGMHSFPLPIATPEITVSLHWHPRMDADPAHRWLRGCVRE 292 >UniRef50_A0NZC9 LysR family regulatory protein n=3 Tax=Rhodobacteraceae RepID=A0NZC9_9RHOB Length = 305 Score = 214 bits (544), Expect = 4e-54, Method: Composition-based stats. Identities = 70/301 (23%), Positives = 126/301 (41%), Gaps = 7/301 (2%) Query: 4 LYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKG 63 + +L+ FDLNLLVIF I Q SIS AA + ++PSAVS +L RLR ND LF R+ +G Sbjct: 1 MVNLRSFDLNLLVIFRAIMQRGSISGAANEIGLSPSAVSHALARLRVMLNDELFFRTAEG 60 Query: 64 IAPTTTGLNLHHHLEKNLRGLEQTINIVN---KSELKKNFIIYGPQLISCSNNSMLIRCL 120 ++PT L +E+ L + I++ + +E + F + ++ L + L Sbjct: 61 VSPTERARELSVDIERGLSFISTAISLQHQFVPAETNRVFTMQVADYVAGFLLPRLAKRL 120 Query: 121 R-QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSN 179 + + + I+ +S E+ + + + + +T + V L ++ Sbjct: 121 QSEAPGITIDILPFSISPESVWDRVDMQ---VRLTPGRLQPEMVRSQRLLADEIVVLMRR 177 Query: 180 RHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIA 239 HPR+ + T E +L + G I+ + R + R ++ +S I + +A Sbjct: 178 GHPRVDEPMTAELYAELPHVKLSQSATGTTVIEDALAARGLKRHMAMTVASWFEIPDIVA 237 Query: 240 VTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNES 299 +DL+ I P L + L L + ++ + E Sbjct: 238 RSDLIAIAPQRLLSLDPRLGKLHSAPLPLDEVVFSFDLCWDLRKEREPGQKWLRQLIVEM 297 Query: 300 F 300 F Sbjct: 298 F 298 >UniRef50_B9J825 Nod transcriptional regulator protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9J825_AGRRK Length = 333 Score = 214 bits (544), Expect = 4e-54, Method: Composition-based stats. Identities = 62/301 (20%), Positives = 114/301 (37%), Gaps = 4/301 (1%) Query: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 M N L+K DLNLL+ F + Q ++S+AAE L + +S +L+RLR +D LF+R Sbjct: 3 MMNDAALRKIDLNLLLAFSVLMQERNVSRAAERLLLGQPGLSAALRRLRETLDDELFVRV 62 Query: 61 GKGIAPTTTGLNLHHHLEKNLRGLEQTIN---IVNKSELKKNFIIYGPQLISCSNNSMLI 117 G+G+ PT L++ +E L G+E+ I + S + F + + L Sbjct: 63 GRGLQPTARALSIAPAIEDALSGIERAIRPPAAFDPSSWQGEFRVGMCDNLESDFFGPLA 122 Query: 118 RCLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLIC 177 LR + + A LL D I+ + I PL + I Sbjct: 123 ARLRGLAP-NARLTGVAFDKREAGRLLDEGAYDFSISVHDEPASWHIRAPLFNQASACIY 181 Query: 178 SNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINS 237 RH R+ E + + + + ++ + + +R++ + + Sbjct: 182 DPRHIRLDAPLGLEDFAKADHITVSLEGNTLTNVDLALARVGYHRQVVATVPRYSALPMA 241 Query: 238 IAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLN 297 + + +P + NL + LP+ + + Y + + F Sbjct: 242 LRAMPAIATIPESIARCMAQLHNLTVSQPPLDLPADPVTMLYRRVDQADSRAVWFRRLFV 301 Query: 298 E 298 E Sbjct: 302 E 302 >UniRef50_A6VSJ2 Transcriptional regulator, LysR family n=28 Tax=Proteobacteria RepID=A6VSJ2_MARMS Length = 328 Score = 213 bits (543), Expect = 5e-54, Method: Composition-based stats. Identities = 55/300 (18%), Positives = 115/300 (38%), Gaps = 4/300 (1%) Query: 4 LYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKG 63 + +L++ DLNLLV + +S+AA+ L+ + A+S +L LRA FNDPL +R Sbjct: 20 MNNLRRIDLNLLVTLHALLVEKHVSRAAQRLHKSQPAISHALANLRAIFNDPLLVRRTGK 79 Query: 64 IAPTTTGLNLHHHLEKNLRGLEQTINI--VNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 + T+ L L + L L I ++ K+ F + S LI+ LR Sbjct: 80 LELTSRANELLPTLTEALHQLGALIEQPTFESTQAKRVFRLAMSDYGSRVVLPGLIQILR 139 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQM-PVISRSVICMPLHTIRNTLICSNR 180 + I+ I S + + + D+ +S + L Sbjct: 140 SRAP-GIDLQVIQGSRTSMLTGVYDGEIDMAFGVFNSPLSDELHTHTLFIEHFICAADKN 198 Query: 181 HPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAV 240 T + Q ++ + ++ ++I+ + ++R+I+ + +A Sbjct: 199 TLPKTGSLEKTQWLSRPHILVAMQTNESNEIENALHREGVSRRIAMTLPHWGVASHMVAN 258 Query: 241 TDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 TDL+ ++ + + L+ +P+ K + ++ ++ + + E Sbjct: 259 TDLILTAARRSFDLFLEDSPLQLFTPPYPIDPFKFSMVWHSRRESDAGHNWLRHTIIEML 318 >UniRef50_Q2SHJ0 Transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SHJ0_HAHCH Length = 291 Score = 213 bits (543), Expect = 6e-54, Method: Composition-based stats. Identities = 58/297 (19%), Positives = 120/297 (40%), Gaps = 13/297 (4%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 +L+ DLNLLVI + + +++AA+ L+++ A S +L+R R F DPL IR + Sbjct: 1 MNLRGVDLNLLVILDALLDERHVTRAAKRLHLSQPATSSALERCRHLFGDPLLIRGRGEM 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTINIVNK--SELKKNFIIYGPQL-ISCSNNSMLIRCLR 121 + +L ++ L E+ IN + +EL++ I +S + R + Sbjct: 61 RLSAKAESLREPIKALLTQAERVINQADTPLAELRQTIRILMADFPVSALLGPLHQRLIT 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 ++++ A++A E L +ADL ++ P + S C+ L ++ H Sbjct: 121 SAPNLDLIVQP-WHGAKSALEQLAKGEADLAVSVFPNVGASFRCVELLYEDYCVLMRKDH 179 Query: 182 PRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVT 241 P N +Q +A + + + + R + R++ Sbjct: 180 PAAQ-NFNLQQWLAYPHVLVSGRGDADSPVDQTLQARGLRRRVGLVVPYFQMAP------ 232 Query: 242 DLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 DL+ ++P +D P+ L+++++ + S ++ + E Sbjct: 233 DLIALLPTHCVP--QDTTKFTVFPPPIPVEGFPLHLAWHVRKHGDQAVSHVVEVIRE 287 >UniRef50_Q399F7 Transcriptional regulator, LysR family n=1 Tax=Burkholderia sp. 383 RepID=Q399F7_BURS3 Length = 313 Score = 213 bits (543), Expect = 6e-54, Method: Composition-based stats. Identities = 51/292 (17%), Positives = 106/292 (36%), Gaps = 5/292 (1%) Query: 10 FDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTT 69 D +LL I + S+S+ AE L + +S +L+RLRA DPL +RSG + PT+ Sbjct: 6 IDAHLLKILHTLITESSVSRTAELLGQSQPTISVALRRLRAITGDPLLVRSGSRMVPTSH 65 Query: 70 GLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSS- 125 + L L++ L G+ +N + + + F I P + ++ + ++ Sbjct: 66 AMTLVEPLDQALAGIAAVLNPASTFDPATTHRTFRIGSPDYLDVFFLPAIVDAFKHEAPG 125 Query: 126 VEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRIT 185 IE ++ E L DL + + + PL + + H Sbjct: 126 ARIEFQHLMTVDGGYEHALESGSLDLAVGNWSTPPQQLHLQPLCRDDLVCVMRDDHRIRR 185 Query: 186 DNSTYEQIMAEEFTQLISKS-AGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLL 244 T + + + + G+ I E+ ++R ++ + ++LL Sbjct: 186 GQLTADVYREADHLGVTTHHATGLGTIDRELARGGLSRNVTTTMPYFGMAPYVLMRSNLL 245 Query: 245 GIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRL 296 L + L L+ + ++ Y ++ + + + Sbjct: 246 FTTTRTLATHFCSLLPLRIEPIPCEPQALTYYQLWHDRTHRSAAAVWLRRLV 297 >UniRef50_Q9RBI3 SalR n=2 Tax=Acinetobacter RepID=Q9RBI3_ACIAD Length = 296 Score = 213 bits (542), Expect = 7e-54, Method: Composition-based stats. Identities = 63/294 (21%), Positives = 124/294 (42%), Gaps = 8/294 (2%) Query: 10 FDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTT 69 DL+L+ IF C+Y++ +ISKAAE L ++ +V+ +L RLR N+PLF R+ G+ T Sbjct: 1 MDLSLIRIFICVYENKNISKAAEILNLSQPSVTYNLNRLRKHLNNPLFERTQYGVEATKL 60 Query: 70 GLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCLR-QDSS 125 L+ ++++ +E ++ N K F I + LI LR Sbjct: 61 SHELYPVFKESILKIEIAVDEALNFNPLTSNKTFRIGLSDIGEICLLPTLIEYLRAHAPK 120 Query: 126 VEIECHDILMSAENAEELLVHRKADLVITQMPVIS-RSVICMPLHTIRNTLICSNRHPRI 184 ++IE +I + + E+ L+ D+ + + + + L R + + HPRI Sbjct: 121 IKIEVEEIKI--DQVEKWLIEGFIDVAVFNSTHLEFKHLEYETLFLERYVALVNMNHPRI 178 Query: 185 TDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLL 244 +++ + E + S S G + + RKI+ + + TDL+ Sbjct: 179 RSTLSFDAYLNESHVAIKS-STGHTQVDHVLKLMGHQRKIALEVPHFGVLQGVLDKTDLM 237 Query: 245 GIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 +P Y + +++ ++L + + + + + L I + Sbjct: 238 VTLPSRAAQQYLNQSHVRVLELPFQMSEFYVGLHWFAQTNEPLARIWLIQTCKK 291 >UniRef50_Q7MFJ9 Transcriptional regulator n=28 Tax=Vibrio RepID=Q7MFJ9_VIBVY Length = 314 Score = 213 bits (542), Expect = 7e-54, Method: Composition-based stats. Identities = 59/296 (19%), Positives = 111/296 (37%), Gaps = 3/296 (1%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 +L+ DLNLL I E + H IS+AA++L ++ AVS++L RLR QF DPL ++ + Sbjct: 6 INLRSIDLNLLTILEKLLIHKHISQAAQALNMSQPAVSRALMRLREQFGDPLLVKVNREY 65 Query: 65 APTTTGLNLHHHLEKNLRGLEQTI--NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQ 122 T G L LE +L + Q + + + + F I L+ +Q Sbjct: 66 RLTAKGEYLRRELESSLNTIRQMLVDDAFDPLQYAGVFTIGALDFEMMMIVPKLLARFQQ 125 Query: 123 DSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHP 182 + +++ + +A + + ADL++ +V L ++ H Sbjct: 126 RAP-KLKLQIVPYNAYMPLHDYLEKVADLLLYSTDDSPTNVFKQRLFNDNYAVVMCQNHV 184 Query: 183 RITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTD 242 T E+ + G DI E+ R R++ + + TD Sbjct: 185 LANQPMTLERYCRSRHVIVSGNGLGKTDIDHELKRRNQQREVVASLPHFSMVPELLINTD 244 Query: 243 LLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 L+ +P L + + +L ++ ++ +N + Sbjct: 245 LIATLPRRLVSHLSHRYEITVAELPFYTADFQVEQFWHLIHHSNPAHQWVRQEIKN 300 >UniRef50_A5L763 Transcriptional regulator n=1 Tax=Vibrionales bacterium SWAT-3 RepID=A5L763_9GAMM Length = 301 Score = 213 bits (542), Expect = 7e-54, Method: Composition-based stats. Identities = 57/291 (19%), Positives = 138/291 (47%), Gaps = 6/291 (2%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 +K+F+LNL+ F IY+ +++ AAE L I+ ++S L++LR ++ D LF+R + P Sbjct: 1 MKRFNLNLIYYFIAIYEEGNLTYAAERLNISQPSLSAHLKQLRDEYRDLLFVRKSYTLEP 60 Query: 67 TTTGLNLHHHLEKNLRGLEQTINIVNKSELKK---NFIIYGPQLISCSNNSMLIRCLRQD 123 T +L+ ++ + + ++ + E K+ F I + S ++ ++++ Sbjct: 61 TPVANDLYPIFKQAHKLVSHSLPETHDFEPKECSYTFRIAAMSISSSVILPQILDRIQEE 120 Query: 124 SSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPR 183 + + +++ E+ + +K DLV+ + +++ + ++CS H + Sbjct: 121 APECV--IEVVNIKEDMATDIREKKIDLVVD-LTNAHPTLLSQEIWGDELCMVCSQNHSQ 177 Query: 184 ITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDL 243 I + T EQ ++ + L + V+ + F +RK++ + +S+ ++I +D Sbjct: 178 INEQVTLEQYLSAKHVMLTHDNYRVNQLTEFHSPIFADRKVARKLNSIADFSDTIYNSDW 237 Query: 244 LGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFID 294 + P + N+Y D +K ++L L + ++ + +++V + Sbjct: 238 IATFPKGVANAYFDKDKIKLLELPFEYIKPSLSVYWHSNRNDDIVNQWLRE 288 >UniRef50_Q0K3U9 Transcriptional regulator, LysR-family n=2 Tax=Betaproteobacteria RepID=Q0K3U9_RALEH Length = 311 Score = 213 bits (542), Expect = 7e-54, Method: Composition-based stats. Identities = 50/292 (17%), Positives = 105/292 (35%), Gaps = 4/292 (1%) Query: 6 DLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIA 65 + DLNL+V + + S+S+AA L++ AVS +L RLR F+DPL +R+ G+ Sbjct: 7 HFRGVDLNLMVTLTVLLRERSVSRAAARLHLGQPAVSGALARLREMFDDPLLVRTAHGME 66 Query: 66 PTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQ 122 PT L L L L +E + + + F++ P + ++ L Sbjct: 67 PTERALELERRLLPALGEIEAALLQRRDFDPLTSDRTFVVGMPDWVELWLAPRILPSLST 126 Query: 123 DSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHP 182 + + + E+L + DL I + T+ + Sbjct: 127 CAP-GVRLAIVPTDPFRGTEMLERNEMDLGIGPFAKGAAWRRERAWQTMGFRCVYGAAPL 185 Query: 183 RITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTD 242 + + + + + A + + R + + + ++ + T Sbjct: 186 DACQILSLQDYLRFPHVLVSYRGAFDSTADTWLATQGQARDVRYSSARFASVPAILKGTA 245 Query: 243 LLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFID 294 L VP L + + L+++ P+P + ++ + N+ + Sbjct: 246 ALATVPAVLADQWCATEGLRQLPCPVPMPDFTVTAVWSAARDNDAGLMWLAN 297 >UniRef50_B6RAE8 Transcriptional Regulator, LysR family n=1 Tax=Pseudovibrio sp. JE062 RepID=B6RAE8_9RHOB Length = 307 Score = 212 bits (541), Expect = 9e-54, Method: Composition-based stats. Identities = 59/301 (19%), Positives = 123/301 (40%), Gaps = 10/301 (3%) Query: 6 DLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIA 65 +L+ DLNLLVI E + + +S AA L+++ AVS++LQRLR NDPL +R Sbjct: 5 NLRGVDLNLLVILEKLLETRHVSLAATQLHMSQPAVSRALQRLRDLLNDPLLVRIAGDYE 64 Query: 66 PTTTGLNLHHHLEKNLRGLEQTIN--IVNKSELKKNFIIYGPQL-ISCSNNSMLIRCLRQ 122 T + L L ++ I + + ++ GP+L ++ +L R ++ Sbjct: 65 LTERAAEIQRLLPSVLATIQDVIAKPEFDPATAQETIRFSGPELEVNLYGPPLLKRMKQE 124 Query: 123 DSSVEIECHDILMSAENAEELLVHRKADLVITQMPV--ISRSVICMPLHTIRNTLICSNR 180 +++E + N E L + +A V++ + + + L + S Sbjct: 125 APGMKLELKS---NIRNQFEPLENGEAHFVLSGQEPSAATSQLHRISLGRFSYVCLMSKD 181 Query: 181 HPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAV 240 HP + +A++ ++ +G I ++ R ++ + S ++ Sbjct: 182 HPLAGKPISLNDYLAQDHISVMITGSGQSIIDEKLAAMGRKRNVAVKIGSFFAAMHFCGQ 241 Query: 241 TDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSI--KLYISYNKSSLNNLVFSRFIDRLNE 298 TDLL +VP + N + L + ++ +++ ++ + + E Sbjct: 242 TDLLFLVPSIFDKKIYEGHNTIASPVPDFLKDHHQEFFLYWHECYHHDPMIQWTRTLMKE 301 Query: 299 S 299 + Sbjct: 302 T 302 >UniRef50_A4XRF8 Transcriptional regulator, LysR family n=2 Tax=Pseudomonas RepID=A4XRF8_PSEMY Length = 320 Score = 212 bits (541), Expect = 9e-54, Method: Composition-based stats. Identities = 62/298 (20%), Positives = 119/298 (39%), Gaps = 7/298 (2%) Query: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 M N DL++ D+NLLV+FE + ++S+ E L++ AVS +L RLR F+DPLFIR+ Sbjct: 1 MMNRNDLRRADINLLVVFETMMHEQNVSRVGEKLFLGQPAVSAALGRLRHLFDDPLFIRT 60 Query: 61 GKGIAPTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLI 117 G+ + PT+ + +L L + + + + + F I + + L+ Sbjct: 61 GRVMEPTSRAQEIFSNLTPALDSIAAALGKCQTFDPTTSEATFHIGLSDDVEYALLPTLL 120 Query: 118 RCLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLIC 177 R LR D+ I +LL + L I+ + + L +IR L+ Sbjct: 121 RHLRVDAP-NIRLVVRRADQWQLPQLLASGEISLGISHALQLPANARSKHLRSIRPMLL- 178 Query: 178 SNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINS 237 T E+ + S +++ + RK+ + Sbjct: 179 RAD--SQAGALTLEEFCRRPHAVVSSMGNVIENADRALHSLGRQRKVVLAVPQFSALPML 236 Query: 238 IAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDR 295 + + ++ IVP + + L+ + LP +L + + ++ ++ R Sbjct: 237 LEGSSMIAIVPEYVAQAMSGSGGLRAEAVPVVLPQQELSMVWRGAAHSDPGERWLRSR 294 >UniRef50_C5A8T0 Transcriptional regulator, LysR family protein n=2 Tax=Proteobacteria RepID=C5A8T0_BURGB Length = 313 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 62/302 (20%), Positives = 120/302 (39%), Gaps = 5/302 (1%) Query: 2 ANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSG 61 N ++ DLNLL +FE ++ S+AA L +T SAVS +L+RLRA + DPLF+R+G Sbjct: 1 MNAMNIADVDLNLLKVFEVLFDEGGASRAAIRLDLTQSAVSAALRRLRALYGDPLFVRTG 60 Query: 62 KGIAPTTTGLNLHHHLEKNLRGLEQTINIVNKSELK---KNFIIYGPQLISCSNNSMLIR 118 +G+APT L + + L Q++ + + + + LI Sbjct: 61 RGLAPTARARELKPLIGEALDRCRQSLAFGAPAPASFEGRAVSVAMSDDFEIAFGGRLIE 120 Query: 119 CLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICS 178 C + + + ++ + L +R+ DL I +R + M L R + Sbjct: 121 CAARLAP-GLRVIFRQTHSQIVGDALANREVDLAIAAGGFATRGLGHMALGHGRYACLVD 179 Query: 179 NRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSI 238 T + +A E + S V + + E R + + + + Sbjct: 180 PAAAPGRLVLTLDDFLAREHVLVSSGGV-VGIVDEALAEIGRRRTVRASTTHFAALPFLL 238 Query: 239 AVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 T + +P+ + L + +P+ + + + S+L + ++ + + Sbjct: 239 RGTPAVATIPHHAAEALARMTGLGLVACPLAMPAYPVALGWRVSTLRDAAVAKLRQAIVD 298 Query: 299 SF 300 SF Sbjct: 299 SF 300 >UniRef50_A8H681 Transcriptional regulator, LysR family n=2 Tax=Gammaproteobacteria RepID=A8H681_SHEPA Length = 300 Score = 212 bits (540), Expect = 1e-53, Method: Composition-based stats. Identities = 77/296 (26%), Positives = 138/296 (46%), Gaps = 6/296 (2%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 KFDLNLL +F + + S K +E+L I+P AVS +++RL+ LF+R G I P Sbjct: 3 FDKFDLNLLKVFSKVMETGSYVKTSEALGISPPAVSIAMKRLQKSLEKELFVRGGGQIQP 62 Query: 67 TTTGLNLHHHLEKNLRGLEQTINIVNKSEL---KKNFIIYGPQLISCSNNSMLIRCLRQD 123 T L+ ++ L +E I+ + + K +F + GP+ + S Q+ Sbjct: 63 TAAAKALYQNVRFELLSIETVISAFGQFDPHVSKAHFSLMGPEEYNAKLLSAFAG--EQN 120 Query: 124 SSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPR 183 + + + E A L R DLVI + + S+ L R LI + + Sbjct: 121 NGLTYSLMQQASTDEEAIASLRTRMTDLVIDSVVLADSSIESELLFEDRIVLIAAKSNST 180 Query: 184 ITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERF-MNRKISFRGSSLLTIINSIAVTD 242 I +N T+EQ + L + +G ++M ++++ + R IS SS++ I ++ T Sbjct: 181 IDENLTFEQYQELPQSVLSLRRSGKLALEMFLEDKLEVRRNISHEASSIMANILIVSQTM 240 Query: 243 LLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 L VP L Y++ L+LK I+ L + + + ++KS+ + +R+ + Sbjct: 241 LFCHVPLRLAIHYQEQLSLKIIEPPISLKPVPVIMQWHKSNSIDPSHIWLRNRIKQ 296 >UniRef50_A5KW47 Transcriptional regulator, LysR family protein n=1 Tax=Vibrionales bacterium SWAT-3 RepID=A5KW47_9GAMM Length = 297 Score = 212 bits (540), Expect = 1e-53, Method: Composition-based stats. Identities = 75/292 (25%), Positives = 125/292 (42%), Gaps = 4/292 (1%) Query: 8 KKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPT 67 KFDLNLL IF +YQ S++KAAE L +T SA+S SL RL++ LF R+G+G+ PT Sbjct: 3 HKFDLNLLRIFSVVYQQGSVTKAAEHLDLTQSAISNSLNRLKSSLGQELFNRTGRGVKPT 62 Query: 68 TTGLNLHHHLEKNLRGLEQTINIVNKS--ELKKNFIIYGPQLISCSNNSMLIRCLRQDSS 125 L+ L+ +L ++ + V + FI+Y + I + L R L Sbjct: 63 RFAQELYEQLQFSLMEIDTVMEGVTHFNVDHPHRFIVYSHEAIFHTLRQSLDRKLAGKP- 121 Query: 126 VEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRIT 185 +E+ +I + LV+ K DLVI L + I + HPR+ Sbjct: 122 IEVLLVEIPSDETRIYDDLVNEKIDLVIDISRPQGAMFQSSVLREEQLCCIVRHNHPRMN 181 Query: 186 -DNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLL 244 ++ E + E + + DE RK SLL +I +++ +D + Sbjct: 182 LESINKESYLQERHALFDLTRLNLKFVDWITDEVLPQRKAYSEHKSLLGMIEAVSYSDAV 241 Query: 245 GIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRL 296 G+VP + Y+ NL + + ++ +N + + + Sbjct: 242 GVVPLSVAKRYQKAFNLDLLPFPFANHTFDSFMISLNKMRSNAANTWLRELI 293 >UniRef50_P52698 HTH-type transcriptional regulator phcA n=16 Tax=Burkholderiaceae RepID=PHCA_RALSO Length = 347 Score = 212 bits (540), Expect = 1e-53, Method: Composition-based stats. Identities = 61/304 (20%), Positives = 117/304 (38%), Gaps = 13/304 (4%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 + D LLVIF + + + AE +++T AVS SL RLR F+DPLFIR G+ P Sbjct: 1 MVNVDTKLLVIFVELLSKRNATYVAEKMHMTAPAVSHSLGRLREIFDDPLFIRVPHGLTP 60 Query: 67 TTTGLNLHHHLEKNLRGL----EQTINIVNKSELKKNFII-YGPQLISCSNNSMLIRCLR 121 T L L + + L E I + E F I + L + L+R R Sbjct: 61 TPKALELGPKVREMLDLWAAINEGDIATFDPLEAAGTFNISFAGTLGDALFDRFLLRVKR 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 +++ + + + + DL + P ++ + + + H Sbjct: 121 LAPGLQVRLTESSSWEADVAAM-RSNELDLAFSPFPTRHPEIVEEVVTSFNMWVCARKDH 179 Query: 182 PRITDNSTYEQIMAEEFTQLISKSAGVD------DIQMEIDERFMNRKISFRGSSLLTII 235 P + D+ + +Q + E + + G + + +R + R + + T Sbjct: 180 PVLKDHCSLDQYLECEHIFIAQGNPGTRAAPSLIPLDYALQQRGLKRHSTMTVHAWRTQA 239 Query: 236 NSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSI-KLYISYNKSSLNNLVFSRFID 294 A TD++ V + + + NL L L ++ L + +++S + + + Sbjct: 240 EVAAQTDMIFTVNSLMKDLVCETYNLNAFPLPSELETVLGLNMLWHRSRNTHPMLVWARN 299 Query: 295 RLNE 298 + Sbjct: 300 LFKQ 303 >UniRef50_B2JFW9 Transcriptional regulator, LysR family n=39 Tax=Burkholderia RepID=B2JFW9_BURP8 Length = 342 Score = 212 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 54/295 (18%), Positives = 102/295 (34%), Gaps = 6/295 (2%) Query: 9 KFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTT 68 D+ L+ + + S+++ A L T A+S +L++LR NDP+ +R G+ PT Sbjct: 8 SLDIWLVRVLRTLLVERSVTQTALRLNQTQPAISTALRKLRETLNDPILVRGKSGMVPTE 67 Query: 69 TGLNLHHHLEKNLRGLE---QTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQ-DS 124 G +L +K LR ++ + + ++ F I P ++ +I R+ Sbjct: 68 YGESLLAAAQKVLRDVDFVATPHGDFDPARSRRTFRIAAPDYLNDFFMPTVIAQFRETAP 127 Query: 125 SVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRI 184 +E + ++ L + DLVI P L + + HP Sbjct: 128 HARLEIESLGPLFDHTC-ALDAGELDLVIGNWPKPDLRFERSDLFSDTVVCMMRADHPLA 186 Query: 185 TDNSTYEQIMAEEFTQLISKSAGV-DDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDL 243 T + +A S I +R+I + + +DL Sbjct: 187 KAPLTRDAYLAAPHLAPAHYSGARGGAIDTGFARARASRRIVATLPYFGLVPQVLLQSDL 246 Query: 244 LGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 + Y L L + + P P IK Y ++ + + + Sbjct: 247 IFTTTRRFALHYAAMLPLAVVDVPIPFPRIKCYQMWHPQPDRPSDIAWLRGLMAQ 301 >UniRef50_B7VP76 Transcriptional regulator (Lys R family) n=2 Tax=Vibrio RepID=B7VP76_VIBSL Length = 304 Score = 212 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 55/296 (18%), Positives = 127/296 (42%), Gaps = 5/296 (1%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 +K D +L+ F + + LSIS A+ +T A+S++L RL+ ++DPLF+++ +G P Sbjct: 1 MKNTDFSLIPYFVVMMEELSISNTAKRFGVTQPAISKALNRLKETYDDPLFVKTKEGYRP 60 Query: 67 TTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQD 123 ++ +++ +++ E T + ++++++F + + S + L + Sbjct: 61 SSFCYDIYPQIKQAYDAFESTFPSKRKFDPTKIERSFNVACISGATYSLMKRVSDILYAE 120 Query: 124 SSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPR 183 + +I H + L + DL I P+ ++ C+ L + HPR Sbjct: 121 TP-DIGLHIDPYYTADIILDLRQHRYDLCIVHTPINDPAMECIQLSNEPMVVAYDKNHPR 179 Query: 184 ITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDL 243 + + T E+ + E+ + + + +RK++ + +++ + TD Sbjct: 180 LGNEITLEEYLEEKHVLHSMWDTKESPL-TKTSKYAKSRKVARKAPGPFEMLDMVRGTDW 238 Query: 244 LGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNES 299 L I + Y + K L Y+ ++KS ++ S F ++ ++ Sbjct: 239 LCISQKSILERYGLLDDFKLSPLPFESDLGTEYLVWHKSRNADMAHSWFRKKIVDA 294 >UniRef50_Q3S4D5 LysR-like regular protein n=1 Tax=Polaromonas naphthalenivorans CJ2 RepID=Q3S4D5_POLNA Length = 301 Score = 212 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 53/239 (22%), Positives = 101/239 (42%), Gaps = 4/239 (1%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 DL++ DLNLLV+F + S+S +AE L +T AVS +L+RLRA D LF+R+ +G+ Sbjct: 1 MDLREIDLNLLVVFNQLLLDRSVSTSAEKLGLTQPAVSNALKRLRAVLKDELFLRTSRGM 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 PT L+L + L L+ N + + F + + L+ L Sbjct: 61 EPTPYALHLAEPVIYALNALQTAFTTRNSFDPLASTRTFNLAMTDIGEMYFVPPLMNALS 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 + + + + +A N +E + DL + +P + L + + H Sbjct: 121 EAAP-HVRISTVRPNAGNLKEDMESGTVDLALGLLPNLQTGFFQRRLFLHKYVCMFRKGH 179 Query: 182 PRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAV 240 P T +Q + +++ + G ++ +D + RK+ + + + + Sbjct: 180 PLAKSPMTLKQFTELDHVGILAANTGHGEVDGLLDRAGIKRKMRLVVPHFIAVGHITSD 238 >UniRef50_A4BGW0 Probable transcription regulator protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BGW0_9GAMM Length = 304 Score = 212 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 68/301 (22%), Positives = 132/301 (43%), Gaps = 4/301 (1%) Query: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 MA+L L + DLNLL + E +YQH ++++AAE+L ITPSAVS +L+RLR +DPLF R Sbjct: 1 MASLKTLNQLDLNLLKVLEAMYQHRNLTRAAEALNITPSAVSHALKRLRDSLDDPLFERR 60 Query: 61 GKGIAPTTTGLNLHHHLEKNLRGLEQTINIVNKSELKKNF--IIYGPQLISCSNNSMLIR 118 G+ + PT L + + L L +++ + + + + L+ Sbjct: 61 GQQMTPTPVCRRLVPEVLQTLNTLRRSLQSFGEFSPETSTQALQIAIHDALEPLLFPLLL 120 Query: 119 CLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICS 178 + ++++ I + + E L + D I +S + +PL ++ + Sbjct: 121 TVFRNTAPLISLSSVKLDRSQLEHQLEIGEVDFAIDIARPLSAPIEHLPLSQSGFCVLGN 180 Query: 179 NRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSI 238 TD T E E + ++ G + + NRK+ R + T I + Sbjct: 181 ES-IIPTDELTTETYGQAEHIVVSNRPTGKVIEDLAFAQLGFNRKVVVRCQNYPTAIRIV 239 Query: 239 AVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 LL +P + ++ + L+ + L +P + + ++ S+++ + R+ Sbjct: 240 KTMPLLLTLPESIAIAW-ETSGLQRVALPFEVPQTETRLYWHALSVDDPLLLWARQRIMT 298 Query: 299 S 299 + Sbjct: 299 A 299 >UniRef50_A5V8P8 Transcriptional regulator, LysR family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V8P8_SPHWW Length = 316 Score = 212 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 60/301 (19%), Positives = 122/301 (40%), Gaps = 15/301 (4%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 L +FDLNLLV+ + + S+++AAE L++T AVS SL RLR F DPL +R G+ + Sbjct: 5 LTQFDLNLLVVLDALLTEKSVTRAAERLFVTQPAVSGSLARLRDIFEDPLLVRVGREMEL 64 Query: 67 TTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCL-RQ 122 T L + + L ++ + + +E K F I S + ++R L + Sbjct: 65 TVRARALAGPVREALLMVKAALGSEESFDPAETKCEFRIAMTDYCSMTILPRIVRELSAR 124 Query: 123 DSSVEIECHDILMSAENAEELLVHRKADLVITQMPVI-------SRSVICMPLHTIRNTL 175 +E+ ++ + + L + D ++T + + T Sbjct: 125 APGIELAVEGLVNKS---FDRLETGEIDFLLTVVERTLLMHSRHPDMLRGADAFEDCYTC 181 Query: 176 ICSNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTII 235 + + HP T E A + + + +++ + S +++ Sbjct: 182 VVAADHP-FDGALTPEDFRAYPNATVSFGENTFTTDRAAYEHGGLDQSPALIAPSFSSLL 240 Query: 236 NSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDR 295 + T L+G VP L + L ++ ++ LP++ ++++ S + S + Sbjct: 241 FQLQGTTLIGTVPNRLAEMFAPMLGVRLLEPPIRLPTLTERLNWHVRSDADPGHSWMRNL 300 Query: 296 L 296 + Sbjct: 301 I 301 >UniRef50_B0C4T0 Transcriptional regulator, LysR family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C4T0_ACAM1 Length = 307 Score = 211 bits (538), Expect = 2e-53, Method: Composition-based stats. Identities = 46/283 (16%), Positives = 119/283 (42%), Gaps = 7/283 (2%) Query: 17 IFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSG-KGIAPTTTGLNLHH 75 F+ + Q S+++AAE L ++ SA+S +L+RLRA DP+ IR+ + + T L + Sbjct: 18 AFDILVQEASVTQAAEKLNMSQSAMSHALKRLRAVLKDPILIRTSQRQMEVTPYALEISP 77 Query: 76 HLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSVEIECHD 132 + + L +++T+ ++ N + +++F I + + ++ L++ L Q + I+ Sbjct: 78 QVRQILAEIQETLLAKDVFNPATAQEDFRIATNDYVEATLSANLLQQLTQQAP-GIQIRV 136 Query: 133 ILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRITDNSTYEQ 192 ++ + L DL I + R + L+ + + P + EQ Sbjct: 137 KGLNKDAVLAALDDNSIDLFIGAGLDLKRWHVQESLYQEEFVCVLQSDCPL--TELSLEQ 194 Query: 193 IMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLGIVPYELY 252 + + + + ++++ +R++ + + + +A +D + ++P + Sbjct: 195 YVERTHILVSFQDDFRGIGDLILEQQQQSRQVVWSTPHFMVVPFLLANSDCVALLPKRMA 254 Query: 253 NSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDR 295 + LK + + + + +++ N + Sbjct: 255 ERCAKEMGLKLLPPPIDVTRFTVSMIWHQRHNNRPQHQWLRKQ 297 >UniRef50_D0RZK6 Transcriptional regulator n=1 Tax=Acinetobacter calcoaceticus RUH2202 RepID=D0RZK6_ACICA Length = 303 Score = 211 bits (538), Expect = 2e-53, Method: Composition-based stats. Identities = 63/303 (20%), Positives = 129/303 (42%), Gaps = 11/303 (3%) Query: 1 MANLYDL-KKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIR 59 M ++ L FDLNLL++F +YQH +++KAAE+L+I+PSA S +L RLR DPLF+R Sbjct: 1 MNFMHGLPHGFDLNLLLVFNALYQHKNVAKAAETLFISPSAFSHALNRLRDTLQDPLFVR 60 Query: 60 SGKGIAPTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSML 116 + PT + + L L Q + + + + F+I + + S +L Sbjct: 61 MNGEMKPTKKSEEIAPSISNCLSTLSQNLFKNSDFDYATSDYEFVIAATEYTAFSVMPLL 120 Query: 117 IRCLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPV---ISRSVICMPLHTIRN 173 ++ LR + I+ I + + + + L+ K D VI + + R Sbjct: 121 VKHLRTIAP-NIKIKIISENKQCSIDELMLGKIDFVIGYSELSEGSPNHLEVFQCFADRY 179 Query: 174 TLICSNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLT 233 +I I + E ++ + ++ S + I + + + R+I ++ Sbjct: 180 VVIAPKN---IYQSMNLESFISAQHIRVSSWNEHYGVIDQSLKKMGIRRQICVEVPHVML 236 Query: 234 IINSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFI 293 + +L+ +P + ++ + + +L +P ++ + + S + Sbjct: 237 APYMMQSAELIVTLPLKAVDAIKKNHEIDIFELPFSVPEYQVNVYSVEKSKLKACQIWLV 296 Query: 294 DRL 296 D + Sbjct: 297 DEI 299 >UniRef50_A8FU12 Transcriptional regulator n=2 Tax=Gammaproteobacteria RepID=A8FU12_SHESH Length = 304 Score = 211 bits (538), Expect = 2e-53, Method: Composition-based stats. Identities = 65/302 (21%), Positives = 123/302 (40%), Gaps = 6/302 (1%) Query: 2 ANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSG 61 N +L K DLNLL + + + +AA+ + ++ SA+S +L RLR F+D LFIR+ Sbjct: 1 MNENNLAKVDLNLLKSLRALIEERHVGRAAQKMNVSQSAMSHTLARLRGVFDDSLFIRNA 60 Query: 62 KGIAPTTTGLNLHHHLEKNLRGLEQTINI--VNKSELKKNFIIYGPQLISCSNNSMLIRC 119 KG+ PT + L L LR ++ + + S + +F I I S S + Sbjct: 61 KGLEPTARAIELSDKLRFILREIDSLLAPKTLELSHIHAHFRIQTHDFILASYLSKAFKR 120 Query: 120 LRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSN 179 + ++ DI + E A + L + +++I + L + Sbjct: 121 INHEAPN--ILIDIKILDETAYDKLDDGELEMIIGAGLQAKPRFMQKRLTDENLVCLLDK 178 Query: 180 RHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFM-NRKISFRGSSLLTIINSI 238 +P + N T E I + D + + RKI F +L + + Sbjct: 179 GNPVLK-NWTPETIFRYPHIKSSLLDDRDDPVSKYGKAMGLPKRKIGFLAETLNFQLPLL 237 Query: 239 AVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 + +DL+ +P + L + PLP + + +++ N++V +++ + Sbjct: 238 SDSDLIAFLPDSIAKKGSQVYGLVVKECPFPLPPLTIRAMWHERHQNDVVHQWIREKIED 297 Query: 299 SF 300 F Sbjct: 298 VF 299 >UniRef50_Q15XJ4 Transcriptional regulator, LysR family n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15XJ4_PSEA6 Length = 299 Score = 211 bits (538), Expect = 2e-53, Method: Composition-based stats. Identities = 56/296 (18%), Positives = 120/296 (40%), Gaps = 8/296 (2%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 K DLNLLV + + ++++A E ++++ S +S ++ RLR F+D LF++ G+ + P Sbjct: 3 FKGLDLNLLVALDALIAERNVTRAGERIHLSQSGMSSAVSRLRQYFDDELFVQVGRELIP 62 Query: 67 TTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQD 123 T+ L + + L +E TI + + ++ + I +L + +I L QD Sbjct: 63 TSLTETLAKPVRRILVEMENTIISRPKFDPASDERCYRIAASELTTMVLMPTVISRLAQD 122 Query: 124 SSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPR 183 + + +S +LL DL+I ++ IC + Sbjct: 123 AP----NIRLNLSTIGETDLLDKGDIDLMIIPKQFTQDGHPFDEIYQEGYKCICWQENTS 178 Query: 184 ITDNSTYEQIMAEEFTQLISKSAGVDDIQME-IDERFMNRKISFRGSSLLTIINSIAVTD 242 I + T+E + + + ++R++ S+LL + I T Sbjct: 179 IGEKITFEDYQSAGHVVVSYGKNNAPAFDSWFMSHYGISRRVEIMTSNLLAPPSLIIGTQ 238 Query: 243 LLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 + V L L ++ ++ +P + + Y+++ N++ S + + Sbjct: 239 RIATVHSRLAQIVSQSLPIRVLQPPIEIPPLTQSMQYHRNRENDVGLSWLRQLIID 294 >UniRef50_C5CZY6 Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus S110 RepID=C5CZY6_VARPS Length = 325 Score = 211 bits (537), Expect = 2e-53, Method: Composition-based stats. Identities = 53/301 (17%), Positives = 103/301 (34%), Gaps = 7/301 (2%) Query: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 M DL D++LL + + S+S+AA + T A+S +L+RLR F DP+ +R Sbjct: 1 MTRSQDL--VDIHLLRVLAALVAERSVSRAAVRMNQTQPAISAALRRLRDAFGDPILVRE 58 Query: 61 GKGIAPTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLI 117 G+ PT L L + L +++ + F I P ++ S + ++ Sbjct: 59 RGGMVPTARALQLRESAREVLGEIDRMLAGPERFEPGASTMTFTIATPDYLAASFMAEVV 118 Query: 118 RCLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLIC 177 R ++ L + E L + D+VI P+ + L + Sbjct: 119 ARFRAEAPQARLLIHPLTPGYDYERALAQGELDIVIGNWPLPPERMHLSLLIEDELVCMM 178 Query: 178 SNRHPRIT-DNSTYEQIMAEEFTQLISKSAGVDD-IQMEIDERFMNRKISFRGSSLLTII 235 S +P T ++ +A + + + R Sbjct: 179 SPGNPLAAPGAMTLQRYLAAAHVVPTPFAKSHRAVVDSHLAGLRQTRDARVFVPYYAMAP 238 Query: 236 NSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDR 295 +A +DL+ + L + + P ++ Y +++ S + Sbjct: 239 YLVAESDLVFTTARHFAEQFTRSLPVVSVAAPEGFPRMRFYQLWHERSQHQGAHRWLRSL 298 Query: 296 L 296 L Sbjct: 299 L 299 >UniRef50_Q2CCM2 Transcriptional regulator, LysR family protein n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CCM2_9RHOB Length = 313 Score = 210 bits (536), Expect = 3e-53, Method: Composition-based stats. Identities = 57/304 (18%), Positives = 114/304 (37%), Gaps = 9/304 (2%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 +L FDLNLL + + + + S ++AA + ++ AVS +L RLRA D LF+R G+G+ Sbjct: 1 MNLAGFDLNLLKVLDALLRERSTTRAAARVGLSQPAVSAALGRLRAALGDELFLRRGQGL 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 T L L + L LE + + + K+ F + G + L L Sbjct: 61 VATDFARALEAPLRETLDRLEDLLAAPQEFDPATAKRTFRLAGIDFFAEMLMPQLAARLA 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 + + + + E L +AD+ + + L L + + Sbjct: 121 AAAP-GVRIQLLNLVPREYEATLERYEADVALFPLTGSPEWAEHRLLFRSPFVLAAAAGN 179 Query: 182 PRI-----TDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIIN 236 PR+ D + + R++ +S I+ Sbjct: 180 PRLAHLAEGDTVPLDLFCDLGHILFSLDGNLRAMGDDALAAVGRQRRVVMSMASFPGILR 239 Query: 237 SIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRL 296 ++A ++ + +VP +L + + L+ L PL + + +++ S + +++ Sbjct: 240 AVAGSEAVSLVPVQLARKLQGEMGLRCFALPMPLEPPVIGMMWHRRSSATPAHAWLREQI 299 Query: 297 NESF 300 E Sbjct: 300 VELM 303 >UniRef50_Q1M9F6 Putative LysR-family transcriptional regulator n=1 Tax=Rhizobium leguminosarum bv. viciae 3841 RepID=Q1M9F6_RHIL3 Length = 317 Score = 210 bits (536), Expect = 3e-53, Method: Composition-based stats. Identities = 53/298 (17%), Positives = 116/298 (38%), Gaps = 6/298 (2%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 + L + DLNLL F+ + + S+++AA+ L T SA+S SL RLR F D LF R + Sbjct: 4 FSLNQIDLNLLRTFDVLMRERSVTRAADRLGRTQSAISHSLGRLRDVFKDDLFTREAGIM 63 Query: 65 APTTTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 PT L + + L + ++ + + +NF I + + LI Sbjct: 64 EPTARAKELAEVISQALHEIRVAVDRHLNFDPTTTSRNFRIGLSDYTAVTYLPELIENFS 123 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLV-ITQMPVISRSVICMPLHTIRNTLICSNR 180 + + + +A L +R+ + + + + + L R Sbjct: 124 MLAP-NASLNVVHAREPDALGSLKNREVECAVLGNPKLDAEHFEVVELSRDRMVCAGWTG 182 Query: 181 HPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAV 240 +P + D + ++ +A Q+ + + + + ++RK+ L I Sbjct: 183 NPAMAD-MSLDRYLASPHLQISADGIAAGVADITLQKLGLHRKVVATIPHYLVAPWVIKG 241 Query: 241 TDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 T+L+ + + + + LP + + + +++S+ + F + + + Sbjct: 242 TELISAFGDGVLLALSEESETAIVPPPLELPDVTISLIFDRSNELDPGHVWFRNLIKD 299 >UniRef50_Q7WJY9 Probable LysR-family transcription regulator n=1 Tax=Bordetella bronchiseptica RepID=Q7WJY9_BORBR Length = 329 Score = 210 bits (536), Expect = 3e-53, Method: Composition-based stats. Identities = 61/298 (20%), Positives = 119/298 (39%), Gaps = 6/298 (2%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 + D+ LL + S+S+ A+ L ++ AVS +L RLR F+DPL +RS G+ P Sbjct: 22 MDNIDIKLLRTLLVLMSERSVSRTADRLDVSQPAVSHALARLRILFDDPLLLRSRAGMVP 81 Query: 67 TTTGLNLHHHLEKNL---RGLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQD 123 T + + + L L + S +++F++ P+ + R LR Sbjct: 82 TDRASEIEARVRRLLAEYDALAHRPQPFDPSVSERHFVLSAPEYAEHLLMPPIFRHLRAH 141 Query: 124 SSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPR 183 + I E A ELL + DL I + ++S+ M L R I HP Sbjct: 142 AP-NIRVEVRAPDPERAYELLESGEVDLRIAWLRKPAQSLRSMQLFQDRIVCIADRDHPA 200 Query: 184 ITDNSTYEQIMAEEFTQLISKSAGVDD--IQMEIDERFMNRKISFRGSSLLTIINSIAVT 241 + + + + + I ++ F + LTI +I + Sbjct: 201 LDGTLSLADFLRYPHARPWGMGRNMSGRVIDEAVELLGKKLAPPFLVQNFLTIPYTITGS 260 Query: 242 DLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNES 299 DLL ++P L ++ ++ +++ LP ++ +++ S ++ + ++ Sbjct: 261 DLLAVLPLVLARAFAAQQPIQILEVPLRLPRMRYGAYWHERSHKDVGHKWLRSVVLQA 318 >UniRef50_B9Z7Z3 Transcriptional regulator, LysR family n=3 Tax=Proteobacteria RepID=B9Z7Z3_9NEIS Length = 324 Score = 210 bits (536), Expect = 3e-53, Method: Composition-based stats. Identities = 58/296 (19%), Positives = 108/296 (36%), Gaps = 8/296 (2%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 + D NLLV + + S+++AA L ++PSA+S++L RLR DPL +R+G+G+ P Sbjct: 1 MSTPDFNLLVTLDVLLAEGSVARAARRLRLSPSAMSRALARLRETTGDPLLVRAGRGLVP 60 Query: 67 TTTGLNLHHHLEKNLRGLEQTINIVNKSELK---KNFIIYGPQLISCSNNSMLIRCLRQD 123 T L L + + ++ + K +L + F + + LI + + Sbjct: 61 TPRALELREQVSQLVQDAAAVLRPAEKLDLTQLVRTFTLRVGDGFVENFGPSLIARVGEA 120 Query: 124 SSVEIECHDILMSAENAEELLVHRKADLVITQM-PVISRSVICMPLHTIRNTLICSNRHP 182 + + + S ++ L DL + V L R + HP Sbjct: 121 AP-GVRLRFMPKSNKDTAP-LRDGSVDLDTGVVGEGTGPEVRVRALFQDRFIGVVRQGHP 178 Query: 183 RITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTD 242 T + A + + + + + R+I + TD Sbjct: 179 LCQGEITPARYAAGRHVLVSRRGTDKGPVDETLRAIGLEREIMTIVGGFAPALALARATD 238 Query: 243 LLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 L+ VP + RD + L P P I + + ++ +L + E Sbjct: 239 LVATVPERHTGTLRD--GMHSFALPFPAPEITVSLLWHPRMDADLAHRWLRGCVRE 292 >UniRef50_Q0B1J5 Transcriptional regulator, LysR family n=1 Tax=Burkholderia ambifaria AMMD RepID=Q0B1J5_BURCM Length = 321 Score = 210 bits (536), Expect = 4e-53, Method: Composition-based stats. Identities = 62/303 (20%), Positives = 114/303 (37%), Gaps = 4/303 (1%) Query: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 ++N+ + L L F + + ++++ A L ++ SAVS +QR R LF+R+ Sbjct: 17 LSNIGGTHNWTLAELRAFCLVCECRNLTQVALRLEMSQSAVSLMVQRWRLALGTTLFVRT 76 Query: 61 GKGIAPTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLI 117 G+ PT + L L L G+ + + ++ F ++ + L Sbjct: 77 RYGVTPTDAAMALRDKLHPLLEGMSLALANSRGFDPKTSERVFRLHMSDIGQLVFLPGLN 136 Query: 118 RCLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLIC 177 L Q + I ++ E E L + D+ I +P+I V L R Sbjct: 137 SFLAQHAP-GIRLQIRNLAWEALEAGLSAGEVDVAIGSLPMIKGRVSSRVLRKERYVTAM 195 Query: 178 SNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINS 237 RHP A E + + S+G ++ + + M R+IS L Sbjct: 196 RRRHPLAKRALDLAAFAAAEHMAIDATSSGHSLVESVMRSKGMQRRISLTMPHFLAAERI 255 Query: 238 IAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLN 297 + +D L VP S+RD L + LP+ + + +++ S + + Sbjct: 256 LGSSDYLLTVPEVAVMSFRDPSALHIVPTPLELPTFDIRLHWHERSRQDQEIKWLRASIT 315 Query: 298 ESF 300 F Sbjct: 316 SLF 318 >UniRef50_Q0BYJ0 Transcriptional regulator, LysR family n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0BYJ0_HYPNA Length = 297 Score = 210 bits (536), Expect = 4e-53, Method: Composition-based stats. Identities = 66/298 (22%), Positives = 114/298 (38%), Gaps = 10/298 (3%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 +L+ DLNLL + E IY S+++A+E L+IT AVS +L RLR F DPLF+R G+G+ Sbjct: 1 MNLRSLDLNLLPVLEAIYAERSLTRASEVLHITQPAVSNALSRLRLHFEDPLFVREGRGV 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 PT L + ++L L + ++ S + F I + + R L Sbjct: 61 KPTAMTEALMPAIRESLDKLRNGLEPRSVFEPSRSTRVFNISSRDASAHILAPPIARRLE 120 Query: 122 -QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNR 180 Q V I SA +E L + DL I + + + L + + ++ Sbjct: 121 VQAPGVRISWSQPQRSAIASE--LASGRLDLAIDVQDLRGADLERVLLSSTKYVCALASD 178 Query: 181 HPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAV 240 HP + T ++ + + S+ G I+ R + + Sbjct: 179 HPLANEPLTLDKFFSMRHIAVSSRREGRSLIEEMARSLGHRITPVHRLPHYQPALEVVRC 238 Query: 241 TDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 T L P + L +KL PS + +++ + + + Sbjct: 239 THLALAAP----QPVTEGSGLAVMKLPFDFPSPGSMLYWHREYAQDPALMWLRGLIRD 292 >UniRef50_UPI0001B54141 LysR family transcriptional regulator n=1 Tax=Streptomyces sp. C RepID=UPI0001B54141 Length = 298 Score = 210 bits (535), Expect = 4e-53, Method: Composition-based stats. Identities = 54/290 (18%), Positives = 116/290 (40%), Gaps = 5/290 (1%) Query: 10 FDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTT 69 DLNLL + + + Q S+++AAE L +P+AVS++L RLR DPL +R+G+G+ PT Sbjct: 1 MDLNLLRVLDALLQENSVTRAAERLGTSPAAVSRTLARLRRTVGDPLLVRAGQGLVPTPR 60 Query: 70 GLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSV 126 + L + +RG + + + L++ F + L+ L + ++ Sbjct: 61 AVELREEVGALIRGCDNVLRPGAGFDAVHLQRTFTVQATDLLLVGLAGSLTERIHAEAP- 119 Query: 127 EIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRITD 186 +++ + + E L D+ + + + + L + I HP Sbjct: 120 QVDVVFLPEAVEGGP-GLRQGLVDVELGVLGHLDPEIRTRRLTRMPLVGIARTGHPLFDG 178 Query: 187 NSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLGI 246 + A + + + I + E + R+ + S + + TDL+ + Sbjct: 179 RIDARRFAAADHIGISRLGKRLGPIDSALAELGLRRRTAVVVPSHTSAMMLARDTDLVAL 238 Query: 247 VPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRL 296 + + L+ + L + L ++++ + + F + L Sbjct: 239 SLADWIPDTIAAMGLRAFPVPLDLEPLDLGMAWHPRNSADPGHRWFREHL 288 >UniRef50_B1J7P4 Transcriptional regulator, LysR family n=5 Tax=Pseudomonas RepID=B1J7P4_PSEPW Length = 314 Score = 210 bits (535), Expect = 4e-53, Method: Composition-based stats. Identities = 55/296 (18%), Positives = 109/296 (36%), Gaps = 7/296 (2%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 L L +C+ Q ++S AAE L ++ SA+S+ L LR F+DPL +R G+G Sbjct: 5 FASLSLAHLRTLDCLLQLKNLSHAAERLGVSQSALSRQLAHLREAFDDPLLVRQGRGYVL 64 Query: 67 TTTGLNLHHHLEKNLRGLEQTIN--IVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDS 124 + G L L + L L+ + + ++ F + ++ +L+ L Q++ Sbjct: 65 SEYGQALVEPLRQVLEELQALRQPAAFDPARCERRFCLAASDYVAEHMLPLLVAALEQEA 124 Query: 125 S-VEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPR 183 V I D LL + DL T ++ L R + HP Sbjct: 125 PGVSI---DYRTWQAGQYALLASGEIDLATTLFDESPANLHGRLLGEDRAVCLMRRDHPL 181 Query: 184 IT-DNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTD 242 + + + +A + ++ I + + + R+IS + + + Sbjct: 182 TACEVLSQDDYLAFKHVRISGGGDKDSFIDRHLRTQGLQRRISLEVPFFSATVQVVGNSQ 241 Query: 243 LLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 L VP + L L + + ++ +++ + +R+ E Sbjct: 242 ALATVPEHIARQLCRLHGLAWRPLGFVEHTQRYWVVWHQRLQASAEHRWLRNRVFE 297 >UniRef50_D1P3H6 Transcriptional regulator, LysR family n=1 Tax=Providencia rustigianii DSM 4541 RepID=D1P3H6_9ENTR Length = 303 Score = 210 bits (535), Expect = 5e-53, Method: Composition-based stats. Identities = 55/301 (18%), Positives = 112/301 (37%), Gaps = 10/301 (3%) Query: 4 LYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKG 63 + + + DL L +F+ + + ++++AA + +T AVS L +LR F D LF+RS +G Sbjct: 1 MNGITRIDLKQLRVFKALLKERNVTRAAAQMGLTQQAVSAQLSKLRDTFQDHLFLRSAQG 60 Query: 64 IAPTTTGLNLHHHLEKNLRGLEQTI--NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 + PT L + + + + +E+ F+I L+ +R Sbjct: 61 LIPTPLAEQLEPRVNTVFESIAALSPPDRFDPAEVYTTFVISATDYAVAVILPRLMAKVR 120 Query: 122 -QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNR 180 Q +++ D ++ LL DL +T + L + + + + Sbjct: 121 TQAPGLKLIIRD--FESDRLYPLLTSGDLDLALTFPAFVPDGCQTKWLFSEHHICVTRSD 178 Query: 181 HPRITDNSTYEQIMAEEFTQLISKSAG-VDDIQMEIDERFMNRKISFRGSSLLTIINSIA 239 P T I + A + + +R I S IA Sbjct: 179 SPMQNQQFTISDIADLPQIIVSPTRANLIGSADDWFASKGYSRNIVMSVPSFAAAPACIA 238 Query: 240 VTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNES 299 TD + +P + + ++ I+L+ PS + +++ S + + + L + Sbjct: 239 STDCIAFLPSRILPNPL----VRPIQLDDSPPSFDVIAAWHLRSNQDPLHKWILSLLQQE 294 Query: 300 F 300 F Sbjct: 295 F 295 >UniRef50_A1WMY5 Transcriptional regulator, LysR family n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WMY5_VEREI Length = 304 Score = 210 bits (535), Expect = 5e-53, Method: Composition-based stats. Identities = 55/300 (18%), Positives = 122/300 (40%), Gaps = 14/300 (4%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 L++ DLNLLV F+ + + ++S+AAE L ++ SAVS +L+RLR F D L +R +G+ P Sbjct: 3 LRQIDLNLLVTFQALVEERNVSRAAERLALSQSAVSHALKRLRNTFQDELLVRGPRGMEP 62 Query: 67 TTTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCLRQD 123 T + L ++ L +E ++ + + + + + + + + +R+ Sbjct: 63 TPRAVTLAIAVKSGLATIETAVDEKRSFDPATCHSTYYLSVTEYVRPFIMAHMCAYVREA 122 Query: 124 SSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPR 183 + + + + + + +PV + M L + HP Sbjct: 123 AP-HVRLVFESPDEHQVGSAVAYEGLQIRLADLPVNGP-MESMRLFDDTFAVAMRREHPF 180 Query: 184 ITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDL 243 T E+ + ++ G I + R + R + + + L + + TDL Sbjct: 181 AEQELTLEKYLQLAHIKVT--GVGSSAIDRALTARSLVRDVVVKMPNWLEALEVVECTDL 238 Query: 244 LGIVPYELYNSYRDFLNLKEIKLEHPLP---SIKLYISYNKSSLNNLVFSRFIDRLNESF 300 + +P N + L + PLP + + +++ + ++ + + ++F Sbjct: 239 VVAMP----NHWTRLGRLPRCCITRPLPLALQMPIDAAWHPRNSSDPAHVWLRETVRQAF 294 >UniRef50_B2JTT0 Transcriptional regulator, LysR family n=3 Tax=Burkholderiaceae RepID=B2JTT0_BURP8 Length = 324 Score = 210 bits (534), Expect = 6e-53, Method: Composition-based stats. Identities = 51/313 (16%), Positives = 122/313 (38%), Gaps = 24/313 (7%) Query: 9 KFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTT 68 + DLNLL +F+ I++ ++ A + L+++ SA+S +L R+R D LF+R+GKG+ PT Sbjct: 5 RIDLNLLRVFDAIFEDRNLGLAGKRLHLSQSAISHALARMREVLGDDLFVRTGKGMEPTM 64 Query: 69 TGLNLHHHLEKNLRGLEQTI--NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSV 126 L + + L+ + + + + ++ F++ I+ L + L ++ + Sbjct: 65 RALRMAAQVRGALQQIRAALGVDEFDPRVAQRKFVVAANDYITSLLLGRLSQRLHAEAPL 124 Query: 127 EIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRITD 186 ++ + + + + D+ I + + L + ++ HP Sbjct: 125 -VDLVVRPSTRLDLAGQIDVGRIDMAIGIFADVPTRLRGTTLWEQTDVVLLHRDHPIAGR 183 Query: 187 NSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNR---------------------KIS 225 T + ++A + + I ER + R ++ Sbjct: 184 AVTRDDMLAHPLIAISQGGEEEGAVGGFIVERGLARQSEMFNRDALNRAFDDPAETPRMR 243 Query: 226 FRGSSLLTIINSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLN 285 + L + + +D+L +VP L + + LK + P + + +++ + Sbjct: 244 MSVAHSLALPALLRHSDMLALVPSSLGRELQRYGELKMCATPYACPDVAVRAVWHERNDA 303 Query: 286 NLVFSRFIDRLNE 298 + +L + Sbjct: 304 DPALQWLRQQLAD 316 >UniRef50_Q11CG0 Transcriptional regulator, LysR family n=1 Tax=Chelativorans sp. BNC1 RepID=Q11CG0_MESSB Length = 304 Score = 210 bits (534), Expect = 6e-53, Method: Composition-based stats. Identities = 63/299 (21%), Positives = 119/299 (39%), Gaps = 5/299 (1%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 D K DL L F + + ++S+AA L + +S+ L +LRA F+DPL + SG + Sbjct: 1 MDRWKIDLFTLRGFSILMEERNVSRAAFKLGLKQPTMSRMLAKLRAYFDDPLLVWSGGHM 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDS 124 PT + L + + L +E+ + + + K + + + N L R + + + Sbjct: 61 VPTPRAILLESEIHQVLATMERLSSSPQEFDPKTSGLTIRLAATGYTENVFLARVMSEVA 120 Query: 125 --SVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHP 182 + ++ + L + D ++ + + L T I HP Sbjct: 121 VRAPGVQLEIRPPDRLHDTSALEKGEVDFLVGWNVTPAPVLRSRVLFTDELVCIARAGHP 180 Query: 183 RITD-NSTYEQIMAEEFTQLISKSAGVDD--IQMEIDERFMNRKISFRGSSLLTIINSIA 239 + D N +YE+ +A Q + S + + + +R + FR +LLT+ +A Sbjct: 181 ALEDGNLSYERYVALPHVQFDTPSKTTTELLLHERLAQRGDRPFVQFRVQNLLTVAEIVA 240 Query: 240 VTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 +DL+ V SY L +L LP ++ +++ F L E Sbjct: 241 NSDLIATVSKRFVISYLQQYQLSIAELPVRLPVMQNRAWWHERMHREPYSHWFRSLLAE 299 >UniRef50_A4JED2 Transcriptional regulator, LysR family n=9 Tax=Proteobacteria RepID=A4JED2_BURVG Length = 308 Score = 209 bits (533), Expect = 8e-53, Method: Composition-based stats. Identities = 55/297 (18%), Positives = 109/297 (36%), Gaps = 7/297 (2%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 K DLNLLV + + +IS+AAE ++++ SA S +L RLR F+D L ++ G+ + P Sbjct: 3 FNKLDLNLLVALDALLSEQNISRAAEKIHLSQSATSNALARLREYFDDELLVQVGRKMEP 62 Query: 67 TTTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRC-LRQ 122 T L + L ++ T+ ++ + F ++ + L R Q Sbjct: 63 TPRAEALKDAVRDILVRVDATVTAQPEFVPAQACRLFRLFVSDYTMTTLIPHLFRLAYAQ 122 Query: 123 DSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHP 182 + D+ +L +ADL+I S L + P Sbjct: 123 APGIGF---DLRPQVAYPHRVLERGEADLLIIPKEYCSTEHPAEVLLEETFCCVLWEHSP 179 Query: 183 RITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTD 242 T E+ M + + + R++ S L+ + + T+ Sbjct: 180 LAKGELTKERYMGAGHIVVQVGEGQTALEAWFMQRLGVVRRVEASTYSFLSPAHLLVGTN 239 Query: 243 LLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNES 299 + + L + L L + +P+++ + ++K ++ L E+ Sbjct: 240 RIATMHRRLAEAAARDLPLVLRDVPLTVPTMEQSVQWHKHRTSDQGLMWLRALLKEA 296 >UniRef50_A6AYH0 Transcriptional regulator n=3 Tax=Vibrio parahaemolyticus RepID=A6AYH0_VIBPA Length = 284 Score = 209 bits (532), Expect = 9e-53, Method: Composition-based stats. Identities = 74/293 (25%), Positives = 132/293 (45%), Gaps = 18/293 (6%) Query: 8 KKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPT 67 KK DLNL+ F ++ S +KAAE L +T AVS S++RL A LF + G+ I+ T Sbjct: 4 KKLDLNLIQTFLIAAEYQSYTKAAEHLGVTQPAVSASIRRLEALIEYQLFTKVGRSISLT 63 Query: 68 TTGLNLHHHLEKNLRGLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSVE 127 + G NL L + L +E ++ F +Y ++ S S +S+ Sbjct: 64 SRGQNLLPKLRQALCMVENALS------TSPQFKVYCSEVFSGSLSSI----------NN 107 Query: 128 IECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRITDN 187 + H+ + + ELL +K LVI + +++ +H N ++C HPRI Sbjct: 108 VSVHEAVATKNLLLELLHQQKIALVIDSIKSDDSTLVNEVIHEEPNVVVCRKTHPRINGQ 167 Query: 188 STYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLGIV 247 +Q E+ L + A ++ N ++ SSL ++ ++ +D + I+ Sbjct: 168 INTKQFFKEKHCVLTEEWAVNQTTNH--NQYLNNVQVETVASSLSGVVLNVIESDNIAII 225 Query: 248 PYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 P+ +++ L+L+ I L + + Y+K NNL R + + E+ Sbjct: 226 PHSFAMKWKEQLDLQVIDLPIESNLVTYHFIYHKREKNNLHHKRIRNNIKETL 278 >UniRef50_Q15Y73 Transcriptional regulator, LysR family n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15Y73_PSEA6 Length = 302 Score = 209 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 67/296 (22%), Positives = 128/296 (43%), Gaps = 6/296 (2%) Query: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 MA+++ LKK DLNLL +FE +Y ++++ A++L+ITPSAVS S++RLR DPLF RS Sbjct: 1 MADIHALKKLDLNLLKVFESLYVEQNMTRTADALHITPSAVSHSIKRLRECLGDPLFQRS 60 Query: 61 GKGIAPTTTGLNLHHHLEKNLRGLEQTIN---IVNKSELKKNFIIYGPQLISCSNNSMLI 117 + PT + + NL L Q + + +F I + S L Sbjct: 61 NNRMLPTPACQRMAPLIIDNLTRLRQIMQHWGEFQPLTSEHHFRIGMHYALEPSILPALT 120 Query: 118 RCLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLIC 177 L + ++ + + L DL + I V+ L ++ Sbjct: 121 ERLALLAP-KVTFSSVRVDRITLTRDLGAGHIDLALDVALPIKSPVLHQKLIDDEFCVLV 179 Query: 178 SNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINS 237 HP + D T + E + ++S+G + ++ ++RK+ R + + Sbjct: 180 RKDHP-LRDRLTKDAYFNAEHIGVSNRSSGASVEDLLFQQQGLSRKVVIRCQNYFSAKGM 238 Query: 238 IAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFI 293 +A ++ L VP + + +++ + L + I ++ ++K++ + S Sbjct: 239 VACSNHLLTVPRRIAEHLKQD-DVQLVSLPVNIADISTHLYWHKNTEQDSALSWLR 293 >UniRef50_Q2CK92 Transcriptional regulator, LysR family protein n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CK92_9RHOB Length = 309 Score = 209 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 63/298 (21%), Positives = 122/298 (40%), Gaps = 7/298 (2%) Query: 6 DLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIA 65 +L+ D +L+IF + +H ++ A + +T AVS +L+RLR + DPLF+R G+ Sbjct: 8 NLRLIDTTVLLIFLSLMRHRKATEVAREMGLTQPAVSHALKRLRTLYEDPLFLRRAHGLE 67 Query: 66 PTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQ 122 PT L + + +R L QT+ + + + + I + L +R Sbjct: 68 PTALAHELEPKIRRIVRLLSQTLENPDQFDPASTATDLRIGAFDYELTTVIPKLAAEMRT 127 Query: 123 DSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRS---VICMPLHTIRNTLICSN 179 S I H + A + LVH + DL I + RS + L++ R L Sbjct: 128 LSP-SINVHAYPLVYTEALDALVHGRLDLAIGYFDIPLRSEATFVVEDLYSERYVLAGRR 186 Query: 180 RHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIA 239 HP ++DN T E++ + + + + + + R I SL ++ I Sbjct: 187 GHPLLSDNPTLEEMAQADHLLVSPHGLIRNRVDEALRMQGYQRNIRTVVPSLFAALSIIE 246 Query: 240 VTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLN 297 ++L+ +P + ++ L + +L + N+ + + ++ L Sbjct: 247 NSELVMTLPERVAVGNWQPFDIVHKPLPIDVGDFQLQAVRHARDANSPLHAWLLENLR 304 >UniRef50_B7QWJ8 Transcriptional regulator, LysR family n=1 Tax=Ruegeria sp. R11 RepID=B7QWJ8_9RHOB Length = 320 Score = 209 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 54/300 (18%), Positives = 109/300 (36%), Gaps = 9/300 (3%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 + DLNLL + + ++ S KA L ++ SAVS +L RLR NDPLF+R G + Sbjct: 1 MNFATLDLNLLRVLDAVFAEGSTVKAGRRLGLSQSAVSGALSRLRHALNDPLFVRQGNQL 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 T +L H L L LE ++ + + F I L L Sbjct: 61 VATEFAESLRHDLRAELDRLETLLSPPSHFDPATASGLFRISAADFFCDMLMPRLGDLLS 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 + + I + + + E L ++ADL + + ++ PL ++ + Sbjct: 121 RKAP-GIRAQLLDLVPRHHVESLERQQADLALLPDTDLPDWMMREPLFRSEYAVLARRGN 179 Query: 182 PRITD-----NSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIIN 236 P D ++ + + + R++ + Sbjct: 180 PATKDLRHGERMPFDLFCSLPHVLFAPHGDLTAQSDEALAKVGRRRRVVMTVPVFSGVCR 239 Query: 237 SIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRL 296 ++ +DL+G++P +L + L + I+L +++ + + + ++ Sbjct: 240 VVSESDLIGLLPLQLARKVQPVYGLDLFVPPIAIDPIQLIGVWHRKADTAPMAAWMRQQI 299 >UniRef50_C5CV67 Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus S110 RepID=C5CV67_VARPS Length = 300 Score = 209 bits (531), Expect = 1e-52, Method: Composition-based stats. Identities = 61/298 (20%), Positives = 114/298 (38%), Gaps = 5/298 (1%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 +L + DLNLL + + + +S+AA+ L++ AVS +L RLR DPL +R G+ + Sbjct: 4 IELSRIDLNLLTVLAALMRERHVSRAAQRLHLGQPAVSHALARLRELTGDPLLVRQGRVM 63 Query: 65 APTTTGLNLHHHLEKNLRGLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDS 124 PT L L L L +E T E + ++ L +ML R LR S Sbjct: 64 EPTERALALMQGLGPALEQIEATFRAQADFEPARAAPVFRIGLTDDLQIAMLPRLLRALS 123 Query: 125 --SVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHP 182 + + + NA L + V+T + + + T R L+ Sbjct: 124 VEAPRARLVTLTVCYRNAARYLDEGQVSAVMTFLKDLPAGAKIRKVRTARFALL-RAD-- 180 Query: 183 RITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTD 242 T + + + ++E R+++F ++ +A T+ Sbjct: 181 TAAARLTLDDYCRRRHVLVTYAGDLCGTVDETLNELGRQREVAFSVPQFGSLPAVLAGTE 240 Query: 243 LLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 LL VP + + L+ L PS ++ +++ + + + + +F Sbjct: 241 LLATVPEHVALALSAQGGLRCEALPFESPSYQIKLAWRAVTDKDAAETWLRRAMLRAF 298 >UniRef50_A1U796 Transcriptional regulator, LysR family n=3 Tax=Marinobacter RepID=A1U796_MARAV Length = 303 Score = 209 bits (531), Expect = 1e-52, Method: Composition-based stats. Identities = 60/293 (20%), Positives = 113/293 (38%), Gaps = 8/293 (2%) Query: 6 DLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIA 65 D+ DL L F + S+S+AA L +T SAVS +L+RLR F DPLF++SG+GI Sbjct: 5 DMLSLDLRSLATFVAVLDEGSVSRAAVRLGVTQSAVSHTLERLRQAFGDPLFVKSGRGIV 64 Query: 66 PTTTGLNLHHHLEKNLRGLEQTIN--IVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQD 123 PT L H+ + L L + + + F I L+R LRQ Sbjct: 65 PTDYALRTGPHIRQLLDDLRTLPSGPPFEPASAEFTFTIAANDYQRDLLLPGLLRILRQQ 124 Query: 124 SSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPR 183 + I I NA ++L DL+I+ + ++ L R + + Sbjct: 125 AP-GIRLQVIPSGIPNA-DMLRKEACDLIISPHAPETTDIMQRGLMADRMVVFYDPN--Q 180 Query: 184 ITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDL 243 + + + + L+ + + + + ++R+ ++ + + TD+ Sbjct: 181 RNAPTDLAEYLKADHIALMFATGERPGFENTLHAKGLDRRNVVTVANFSGLPEFLRGTDM 240 Query: 244 LGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRL 296 L P + + L L + +++ N+ +++ Sbjct: 241 LATAPERMSAQLMRDF--AWVPLPFDYKPFTLLMLWHRRHQNDPAHRWVRNQV 291 >UniRef50_B0KG68 Transcriptional regulator, LysR family n=9 Tax=Pseudomonas RepID=B0KG68_PSEPG Length = 324 Score = 209 bits (531), Expect = 1e-52, Method: Composition-based stats. Identities = 63/300 (21%), Positives = 124/300 (41%), Gaps = 9/300 (3%) Query: 2 ANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSG 61 N +L+K D+NL+V+FE + Q ++++AAE L++ VS +L RLRA FNDPL +R G Sbjct: 16 MNRNELRKADINLMVVFEALMQERNLTRAAEKLFVAQPTVSAALARLRAMFNDPLLVRVG 75 Query: 62 KGIAPTTTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIR 118 + P+ + +L L + +++ + K F I + L+R Sbjct: 76 NRMEPSARAEEVIKYLTPALDAMSVALSLTHDFDPLTSKMTFRIGLSDDVESGLLPPLLR 135 Query: 119 CLR-QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLIC 177 LR + +V + + +LL + I+Q + + L T++ ++ Sbjct: 136 ALRVEAPNVVVVVQHVDYWR--IPDLLAAGDVTVGISQTKGLPANAKRKVLRTMQGRVV- 192 Query: 178 SNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINS 237 + T ++ A Q+ + + + E RK+ ++ Sbjct: 193 RAD--KSATPLTLDEFCARPHVQVSPTANTQGVVDDWLKEIGRERKVVLSVPQFSSLPAI 250 Query: 238 IAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLN 297 +A TDLL P + NL+ +L +++L + + ++ ++ RL Sbjct: 251 LAGTDLLACCPDYAAQGMERWGNLQAEQLPFETTALELAMVWLSTTDSDPAERWLRSRLE 310 >UniRef50_Q0BCW3 Transcriptional regulator, LysR family n=30 Tax=Proteobacteria RepID=Q0BCW3_BURCM Length = 342 Score = 209 bits (531), Expect = 1e-52, Method: Composition-based stats. Identities = 50/289 (17%), Positives = 110/289 (38%), Gaps = 7/289 (2%) Query: 17 IFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTTGLNLHHH 76 F+ +Y+H S++ AA L ++PSA+S +L RLR D LF+R G + PT ++ Sbjct: 50 AFDALYRHRSVAAAAHELAMSPSALSHALARLRDAIGDALFVRLGNEMQPTVRADDIATW 109 Query: 77 LEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSVEIECHDI 133 L + + + + ++ + F+ + + L+ + + + + + Sbjct: 110 AGDALDTMSKGLARARRFDPAQSDRTFVFAASDYTAFAVLPALLARIERVAP-RLRIRVV 168 Query: 134 LMSAENAEELLVHRKADLVITQMPV---ISRSVICMPLHTIRNTLICSNRHPRITDNSTY 190 + + + L + D + S + + +I S HP I T Sbjct: 169 HSERKISIDELAAGRIDFALGYHEESTADSPGIEDFDWFSDDYVVIASAAHPDIRRRLTL 228 Query: 191 EQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLGIVPYE 250 +Q +A + + + +D + R+++ R S+L +IA + LL VP Sbjct: 229 DQYLAARHVVVTPWNESRGVVDYVLDRLGLARQVAVRLPSVLAAPFAIAESTLLMTVPNR 288 Query: 251 LYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNES 299 + R ++ +P + + + +L ++ Sbjct: 289 AAQALRHAAPIRIFPAPFEIPRYTVKVYSHAKHARTDAHRWIRAQLLDA 337 >UniRef50_A2SDX3 Transcriptional regulator, LysR family n=6 Tax=Burkholderiales RepID=A2SDX3_METPP Length = 326 Score = 209 bits (531), Expect = 1e-52, Method: Composition-based stats. Identities = 68/309 (22%), Positives = 118/309 (38%), Gaps = 12/309 (3%) Query: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 M+ K +L+L+ + + S+S+AA L T AVS L+RLRA DPL +RS Sbjct: 1 MSQPTLFDKIELHLVRVLHTVITERSVSRAALRLRTTQPAVSAQLKRLRALVGDPLLVRS 60 Query: 61 GKGIAPTTTGLNLHHHLEKNLRGLEQTIN------IVNKSELKKNFIIYGPQLISCSNNS 114 G G+APT L L + LR E+ + + + F + + Sbjct: 61 GTGMAPTAVALQLLEPAAELLRNAERLFGSRAEALAFDPAHSETTFRVAASDYLDPQFLP 120 Query: 115 MLIRCLRQDSSVEIECHDILMSAE-NAEELLVHRKADLVITQMPVISRSVICMPLHTIRN 173 L+ LR ++ I + +SAE + + L + DLVI + L + Sbjct: 121 ALVTRLRAEAP-GIRVEVLPLSAEFDYRKGLARGEVDLVIGNWLRPPAELHLGRLLSDEI 179 Query: 174 TLICSNRHPRITDN--STYEQIMAEEFTQLISKSAG-VDDIQMEIDERFMNRKISFRGSS 230 + + HP + T E+ +A E G I +D + R I R Sbjct: 180 VCLVAEDHPAVKSPRSWTAERYLASEHIAPTPLHPGARGVIDEHLDALGLARDIVVRSPY 239 Query: 231 LLTIINSIAVTDLLGIVPYELYNSYRDFLN-LKEIKLEHPLPSIKLYISYNKSSLNNLVF 289 +A + L+ + Y L L+ ++ P P++ Y +++ S + Sbjct: 240 FGLGPQMVAHSRLVLTTGRLFCSRYVGQLPGLRIVRCPVPFPALVYYQLWHELSHQSAAG 299 Query: 290 SRFIDRLNE 298 + + Sbjct: 300 RWLRGVMRD 308 >UniRef50_B9Z947 Transcriptional regulator, LysR family n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z947_9NEIS Length = 330 Score = 208 bits (530), Expect = 2e-52, Method: Composition-based stats. Identities = 64/298 (21%), Positives = 120/298 (40%), Gaps = 6/298 (2%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 L++ DLNLLV F+ + Q +S+AA L++ A+S +L RLR +DPLF+RSG + P Sbjct: 11 LRRLDLNLLVAFDALMQERHVSRAAARLFLGQPAMSHALARLRQLLDDPLFVRSGSRMEP 70 Query: 67 TTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQD 123 T L + L +Q + + + + F + P + LI LR+D Sbjct: 71 TPRACELAPQVRAWLEQAQQFLFRADAFDPAAAHATFRLAAPDGMEALLYPALIATLRRD 130 Query: 124 SSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICM-PLHTIRNTLICSNRHP 182 + + L+ + L H + DL+IT P+ R L + S R Sbjct: 131 AP-GVRLRSQLLETDQQLAALDHDEVDLLITAAPLALRDWHSRLRLFKSDFISVHSRRQL 189 Query: 183 RITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTD 242 + + +T + + + + + + R++ +SLL I + +A Sbjct: 190 PLPEPATLADLASCDHVVSSYRGTAAGVVDHLFAAHGLERRVQVLSASLLAIGHIVAQAP 249 Query: 243 LLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 L+ I P + L L I + + +++ + + + D + + Sbjct: 250 LMSIQPAIYRGLFSTTPELACAPLPGEA-RITVGLVWHRRNDRHPLHRYLRDTVIAAM 306 >UniRef50_Q7D3I0 Transcriptional regulator, LysR family n=1 Tax=Agrobacterium tumefaciens str. C58 RepID=Q7D3I0_AGRT5 Length = 316 Score = 208 bits (529), Expect = 2e-52, Method: Composition-based stats. Identities = 46/311 (14%), Positives = 112/311 (36%), Gaps = 12/311 (3%) Query: 2 ANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSG 61 + L DLNLL + + +++ A E + ++ A+S +L+R+RA D LF ++ Sbjct: 1 MQRFQLGSVDLNLLKVIYALVVKGNMTAAGEYIGLSQPAMSHALKRVRAITGDELFKKTS 60 Query: 62 KGIAPTTTGLNLHHHLEKNLRGLEQTIN---IVNKSELKKNFIIYGPQLISCSNNSMLIR 118 +G T + + + + E + + + + F I S L+ Sbjct: 61 RGFVMTRFCTEIFPAVRRIIEDTETVMLQRLAFDPATSHRAFRIGMNDYFSVVLMPRLVE 120 Query: 119 CLRQDS-SVEIECHDILMSAEN--------AEELLVHRKADLVITQMPVISRSVICMPLH 169 +R ++ +E + + + +E L D+ + C L Sbjct: 121 RVRSEAEHCVLEVIHMPRTGISHNRDFMPVVQEHLNEGTIDVAVMTAENFPARYRCASLF 180 Query: 170 TIRNTLICSNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGS 229 T R I S +P + T + +++ ++ S + I +D + R++ Sbjct: 181 TERRVCIMSANNPAAKEPLTLDALLSLGHVKVTSSPSRRGWIDERLDAMGLERRVVAVVP 240 Query: 230 SLLTIINSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVF 289 + ++ +DL+ ++P + + L ++ + + + Sbjct: 241 HFSAAVAIVSRSDLVAMMPESVAKLFERSHELLLLESPFEEEKQSTSMIWLAEKERDPAS 300 Query: 290 SRFIDRLNESF 300 ++++ F Sbjct: 301 LWLREQISACF 311 >UniRef50_Q47ZN8 Transcriptional regulator, LysR family n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47ZN8_COLP3 Length = 312 Score = 208 bits (529), Expect = 2e-52, Method: Composition-based stats. Identities = 65/296 (21%), Positives = 128/296 (43%), Gaps = 4/296 (1%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 L+ DLNLL IF + +IS AAE+L +T AVSQ+L+RLR+ +NDPLF R + P Sbjct: 5 LRNVDLNLLSIFTALMHEKNISHAAENLGMTQPAVSQALKRLRSLYNDPLFERKSGKMMP 64 Query: 67 TTTGLNLHHHLEKNLRGLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSV 126 T ++ + K L + T+ + + + ++ NN L + ++ + V Sbjct: 65 TLKADEIYPIINKILADVSSTLPDTGDFLPETANLNFHINILGVGNNDFLTKLSQRLAHV 124 Query: 127 EIECHDILMSAE--NAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHP-- 182 + + +AE+ L ++ DL + + + L + +I HP Sbjct: 125 APNISLTVSTEMLVDAEKSLRDKEYDLHLDYLTIDEIGCHHQELFNDQLFIIARKGHPNL 184 Query: 183 RITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTD 242 N + +AE+ L + V + + + + NR+I + +S+ I+ ++ TD Sbjct: 185 NNKTNLLLSEYLAEKHAVLAPRKGNVYPLSLALQDFSYNREIKYTSTSIENILEIVSATD 244 Query: 243 LLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 L+ I+P + S + + + Y++++ S + + + Sbjct: 245 LICIMPGTVLQSMHNVNDYIWFNPPFKTKQMIAYMNWHWSMEHVKSHRWLRTIIID 300 >UniRef50_D0J6E9 Transcriptional regulator, LysR family n=2 Tax=Comamonas testosteroni CNB-2 RepID=D0J6E9_COMTE Length = 317 Score = 208 bits (529), Expect = 2e-52, Method: Composition-based stats. Identities = 60/287 (20%), Positives = 105/287 (36%), Gaps = 7/287 (2%) Query: 17 IFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTTGLNLHHH 76 +F+ +++H S+ AA+ L I+PSA S +L RLR D LF RSG + PT + Sbjct: 25 VFDALFRHRSVVAAADELAISPSACSHALARLREGLGDELFFRSGSSMQPTPRATEMAEG 84 Query: 77 LEKNLRGLEQTIN---IVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSVEIECHDI 133 + L L + ++F + + LI + ++ + + Sbjct: 85 ITLALHTLSDQLGDPAAFAPGSSTQSFTFAATDFTTFALMPALISRIEHEAP-HVRLRVV 143 Query: 134 LMSAENAEELLVHRKADLVITQMPVISR---SVICMPLHTIRNTLICSNRHPRITDNSTY 190 +A LV A V+ S V + HT ++ HPRI + Sbjct: 144 HSRHRDAYSDLVQEGAHFVMGFSDEFSPAQEGVEVLQGHTDAYVVVARRGHPRIGKRLSM 203 Query: 191 EQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLGIVPYE 250 Q +AE + I + + R+I+ S++ +A +DLL +P Sbjct: 204 AQYLAERHVVVKPWQEEKGVIDSALSKGGWTREIAIELPSVMAAPFIVANSDLLITLPRM 263 Query: 251 LYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLN 297 + K +PS L + + L++ RL Sbjct: 264 AALQLEASAAIAIFKAPFEVPSYTLNVYFQHRHLSSPWHRWMRARLE 310 >UniRef50_Q7NT25 Probable transcription regulator protein n=1 Tax=Chromobacterium violaceum RepID=Q7NT25_CHRVO Length = 310 Score = 208 bits (529), Expect = 2e-52, Method: Composition-based stats. Identities = 55/295 (18%), Positives = 123/295 (41%), Gaps = 7/295 (2%) Query: 10 FDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTT 69 +LNLL E + + +++++A L +T SA+S+ L +LRAQF DPL +R G+ T Sbjct: 5 LNLNLLRSLEALLETRNLTRSAARLGLTQSAMSRHLVQLRAQFQDPLLLREGQRFVLTER 64 Query: 70 GLNLHHHLEKNLRGLEQTINI--VNKSELKKNFIIYGPQLISCSNNS-MLIRCLRQDSSV 126 L L+ L +EQ + S ++ F G ++ +L R L Q + Sbjct: 65 AEELRLGLKAVLEQVEQLYQPPQFDPSACEREFSFAGSDYLAEYMLPDILDRVLPQAPGM 124 Query: 127 EIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRITD 186 ++ + +LL ADL+ T + ++ L + + ++ HP Sbjct: 125 RLKF---IPWQAGRFDLLSDGAADLISTIADEVPDNIYGKSLGQDQPMCVMADNHPLHDK 181 Query: 187 N-STYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLG 245 + +A ++ S S + +++ ++R+I ++ ++ ++ + LL Sbjct: 182 PALERDDYLAWPHARVSSASDKDGFVDIQLARNGLSRQIRIATPYFVSALSIVSRSQLLL 241 Query: 246 IVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 +P L ++ ++ L + + ++ ++ + + F + + Sbjct: 242 TLPEHLAVRFQRQFPVRAKPLPFIDYTYRYWLLWHGRADKDPAHRWFRGHVFDVL 296 >UniRef50_B4S2V4 Transcriptional regulator, LysR family protein n=2 Tax=Alteromonas macleodii RepID=B4S2V4_ALTMD Length = 311 Score = 208 bits (529), Expect = 2e-52, Method: Composition-based stats. Identities = 61/291 (20%), Positives = 129/291 (44%), Gaps = 6/291 (2%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 +K DLNLL +FE ++QH ++++ AE+L+ITPSAVS +++R R DPLF++ + + P Sbjct: 11 FEKLDLNLLKVFEALWQHRNMTRVAEALHITPSAVSHAMRRFRDILGDPLFVKEKQSMLP 70 Query: 67 TTTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCLRQD 123 T L + K L + + + + + F+I + + L+ L + Sbjct: 71 TAACERLAPAILKALNDIRKALGEFVDFDPLHSHQRFVIAMQESLELGVLPALLSTLEKQ 130 Query: 124 SSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPR 183 + IE + + L +R LVI ++ + L ++ + ++P Sbjct: 131 AP-NIEIVSTRLHRDTILADLTNRNLHLVIDIGRAVAAPISHSLLRRDTYKVLMNKQNPL 189 Query: 184 ITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDL 243 ++ +A + +++ G ++ + + ++R +R + + +A TD Sbjct: 190 AQS-LDKKRYVAARHITVSNRAKGASVEEIALQQLGVSRPSLWRCQNYRAAADVVANTDA 248 Query: 244 LGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFID 294 L +P + ++ D NL KL + LP ++ ++ ++ D Sbjct: 249 LLTLPGSVADAVNDD-NLISTKLPYQLPELETHLYWHSQQEGEPGLMWLRD 298 >UniRef50_Q4KHX1 Transcriptional regulator, LysR family n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4KHX1_PSEF5 Length = 308 Score = 207 bits (528), Expect = 3e-52, Method: Composition-based stats. Identities = 50/295 (16%), Positives = 112/295 (37%), Gaps = 4/295 (1%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 L+ DLNLLV+ + + +++ A L+++ A+S SL +LR +DP+ IR G + Sbjct: 6 LRNIDLNLLVVLDALLTEKHVTRTALRLHLSQPAISHSLSKLRGLLDDPILIRRGSELVL 65 Query: 67 TTTGLNLHHHLEKNLRGLEQTIN---IVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQD 123 ++ N+ L + L +E + + ++ F + + L+ LR+D Sbjct: 66 SSLAQNIQQPLREILGQIETLFGKSIDFDPASSQRIFTLAMSDYGAALVLPNLMVRLRRD 125 Query: 124 SSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPR 183 + + E + K DL + P +S + L + + R Sbjct: 126 APNT-TLVVTQDTRHGMFEQVSQGKIDLALGVFPNLSGDISTEVLFEETFSCLLDRRTLP 184 Query: 184 ITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDL 243 + +A + + ++ + + + R+I+ T + I TDL Sbjct: 185 ADGTLDLDSYLARPHILVSMDGSANGEVDSLLRDEGLQRRIAVSVPHWRTAPSMIHNTDL 244 Query: 244 LGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 + V + +L +++ P+P +++ N +++ + Sbjct: 245 ILTVATRTLDEALLNQDLIQLRPPLPIPPFPFVQIWHQRFDNEPAHVWLREQVKQ 299 >UniRef50_A8H854 Transcriptional regulator, LysR family n=1 Tax=Shewanella pealeana ATCC 700345 RepID=A8H854_SHEPA Length = 303 Score = 207 bits (528), Expect = 3e-52, Method: Composition-based stats. Identities = 65/293 (22%), Positives = 125/293 (42%), Gaps = 10/293 (3%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 + + DLNLL +F + + + KAAE L+++ AVS++L+RLR F D LF+RS G+ P Sbjct: 1 MSQLDLNLLKVFRVLIEVKNTRKAAEILHLSQPAVSRALRRLRDYFGDELFVRSAHGLEP 60 Query: 67 TTTGLNLHHHLEKNLRGLEQTINIVNKSELK---KNFIIYGPQLISCSNNSMLIRCL-RQ 122 T+ L + L + + L + +N+ + E + I I+ LI+ L + Sbjct: 61 TSKALVIGSRLPEAMDQLFEALNVKEEFEPQFYSGKVTIAVNGFIAHWLVPPLIKALTEK 120 Query: 123 DSSVEIECHDILMSAENAEELLVHRKADLVITQMPV-ISRSVICMPLHTIRNTLICSNRH 181 ++EI + E+ + +++ + L I P+ +++ +I L + ++C H Sbjct: 121 APNMEIY---MANWEESTSDKIINGEIQLAINYFPLELTKQLIQEKLGSDDFVVLCRKDH 177 Query: 182 PRITDNSTYEQIMAEEFTQLISKSAGV--DDIQMEIDERFMNRKISFRGSSLLTIINSIA 239 P + E I + + + ++ S + I++S+ Sbjct: 178 PFQKEVIGAEDFPKYPLASHIVPGWNETKNFTVEALKKLGYKPRVQLSSSKMNIILSSLE 237 Query: 240 VTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRF 292 +TD+L L + D + +I E PS + Y S N + Sbjct: 238 LTDMLLPCSKLLAKTLSDRFRIIDIDPELEQPSSDFALIYANKSRRNPLDEWL 290 >UniRef50_B2I0F3 Transcriptional regulator n=11 Tax=Acinetobacter RepID=B2I0F3_ACIBC Length = 276 Score = 207 bits (528), Expect = 3e-52, Method: Composition-based stats. Identities = 61/275 (22%), Positives = 111/275 (40%), Gaps = 7/275 (2%) Query: 30 AAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTTGLNLHHHLEKNLRGLEQTIN 89 AA+++ +T +VS L ++R FNDPLFIR G + PT + + + + +E N Sbjct: 2 AADAIGLTQPSVSNGLNKIRQHFNDPLFIRVGNEMIPTELAKQIFPLISEVIDKVESINN 61 Query: 90 I---VNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSVEIECHDILMSAENAEELLVH 146 + + F I + L L++ + + I + ++ E + ++ + Sbjct: 62 FNVNFDPLTSDQLFTIAMTDVSHLVLLPQLTNYLKEKAPL-IRLNIRPITPETSYQM-AN 119 Query: 147 RKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRIT-DNSTYEQIMAEEFTQLISKS 205 + DL I +P + +I S HPR+ +N T E M E + + Sbjct: 120 GEIDLAIGFLPQLEEGFYQQKFFRQHYVVISSKSHPRLDPNNFTLEDYMRESHIDIDA-G 178 Query: 206 AGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLGIVPYELYNSYRDFLNLKEIK 265 G I+ E+ + ++R I R S L + + TD + VPY L NL+ + Sbjct: 179 IGHYHIKNELQNKGLDRNILIRLPSYLGVGLVVQETDAIATVPYYLSQVLLVRENLQILP 238 Query: 266 LEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 P+ + ++ S + F E F Sbjct: 239 APLDFPTYDVKQHWHMSCHHKSSHKWFRQTCYELF 273 >UniRef50_Q5QVJ9 Transcriptional regulator, LysR family n=1 Tax=Idiomarina loihiensis RepID=Q5QVJ9_IDILO Length = 331 Score = 207 bits (527), Expect = 4e-52, Method: Composition-based stats. Identities = 55/300 (18%), Positives = 116/300 (38%), Gaps = 6/300 (2%) Query: 3 NLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGK 62 ++ +L+ DLNLLVI + + +++AA L ++ A S +L R R F+DPL R Sbjct: 26 DMVNLRSLDLNLLVILHALLEEQHVTRAARRLALSQPATSNALDRCRHIFDDPLLERVAG 85 Query: 63 GIAPTTTGLNLHHHLEKNLRGLEQTINI--VNKSELKKNFIIYGPQLISCSNNSMLIRCL 120 + T +L L + L + + I V +++++ + + L+ L Sbjct: 86 EMRLTAKAQSLKEPLSQALLAITAIVEIPKVELTQVRQTVRLIMADQPGLIVMTHLLTKL 145 Query: 121 RQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNR 180 + S+++A L + +AD+ I+ P + + + Sbjct: 146 STSAPKVNLSLLPWRSSKDALHRLENGEADIAISTFPALPPKFYRQQIAYESYVVAMRAS 205 Query: 181 HPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAV 240 HP ++ +A + + ++ + ++ R + + I I Sbjct: 206 HPAAQK-FNADEWLAWPHIVVSGEGNARGSVEEVLAQQGKVRHVGAVVPNFTMIDPLIKA 264 Query: 241 TDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 TD++ P N D L + +P L+++++ ++LV I+ L F Sbjct: 265 TDMIATTP---MNCLSDPQGLAIFEPPIAVPGFSLHLAWHARRDSDLVVKHVIETLQHLF 321 >UniRef50_A1K8D7 Transcriptional regulator, LysR family n=1 Tax=Azoarcus sp. BH72 RepID=A1K8D7_AZOSB Length = 298 Score = 207 bits (527), Expect = 4e-52, Method: Composition-based stats. Identities = 57/299 (19%), Positives = 118/299 (39%), Gaps = 9/299 (3%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 +++ DLNLL IFE +Y ++S+AA L +T +VS L RLR F DPLF+R+ G+ Sbjct: 1 MNIQSVDLNLLKIFEAVYLERNVSRAAVRLELTQPSVSHGLTRLRLLFGDPLFVRTRSGV 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 PT + +++ LR L+ T++ + + F ++ L+R L Sbjct: 61 EPTVVADRIAGPVQQALRVLQTTLDEHAHFEPASSGRTFRLHMSDFGEVIFLPKLMRALL 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 + + + + L + DL I +PV+ + C L +I RH Sbjct: 121 ERAP-GVRIETRQLGGVELAAALDSGQIDLAIGYLPVLDQGFECRHLLADEYAVIAP-RH 178 Query: 182 PRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVT 241 + +F + S + E + ++ + + +A Sbjct: 179 LIPSGGKGDNAFNGLDFIAVTS----HPQTLAILRECGLLDRVKLWVPHFMVVPAILAER 234 Query: 242 DLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 + + P E+ +++ ++ L + + + +N+ + + + + + F Sbjct: 235 NFAAVAPREVVHAFSPRSRVRSFPLPALQRGMDVNLYWNRRYTGDPGHAWMRELVADLF 293 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_C3KKF8 Putative transcriptional regulatory protein, Lys... 333 5e-90 UniRef50_Q2S713 Transcriptional regulator n=1 Tax=Hahella chejue... 332 7e-90 UniRef50_B9Z480 Transcriptional regulator, LysR family n=1 Tax=L... 331 2e-89 UniRef50_A6T413 Transcriptional regulator, LysR family n=1 Tax=J... 331 2e-89 UniRef50_B1KAV0 Transcriptional regulator, LysR family n=5 Tax=B... 327 3e-88 UniRef50_P10183 HTH-type transcriptional activator nahR n=67 Tax... 325 1e-87 UniRef50_C6XIT5 Transcriptional regulator, LysR family n=1 Tax=H... 325 1e-87 UniRef50_A9G5G2 Nodulation protein D n=2 Tax=Proteobacteria RepI... 324 2e-87 UniRef50_Q3KA14 LysR family regulatory protein n=24 Tax=Bacteria... 323 5e-87 UniRef50_A0LD88 Transcriptional regulator, LysR family n=1 Tax=M... 321 2e-86 UniRef50_Q2S7V2 Transcriptional regulator n=1 Tax=Hahella chejue... 319 6e-86 UniRef50_A1W256 Transcriptional regulator, LysR family n=2 Tax=C... 319 7e-86 UniRef50_Q473Q1 Transcriptional regulator, LysR family n=9 Tax=B... 318 1e-85 UniRef50_B0C5B7 Transcriptional regulator, LysR-family n=1 Tax=A... 316 6e-85 UniRef50_C6ARG9 Transcriptional regulator, LysR family n=7 Tax=P... 315 1e-84 UniRef50_Q5P743 Transcriptional regulator, LysR family n=2 Tax=B... 315 1e-84 UniRef50_A8GKS5 Transcriptional regulator, LysR family n=1 Tax=S... 313 5e-84 UniRef50_Q1XGL2 Transcriptional activator NahR n=3 Tax=root RepI... 313 5e-84 UniRef50_Q39AY8 Transcriptional regulator, LysR family n=1 Tax=B... 311 1e-83 UniRef50_Q12M05 Transcriptional regulator n=3 Tax=Gammaproteobac... 311 1e-83 UniRef50_C4UEX0 Lys-R type regulatory protein n=1 Tax=Yersinia r... 311 2e-83 UniRef50_B6R1K2 Transcriptional regulator, LysR family n=1 Tax=P... 311 2e-83 UniRef50_Q15UP0 Transcriptional regulator, LysR family n=4 Tax=A... 311 3e-83 UniRef50_B4X4B4 LysR substrate binding domain protein n=1 Tax=Al... 310 3e-83 UniRef50_A9GLW1 Transcriptional regulator, LysR family n=1 Tax=S... 310 4e-83 UniRef50_A1WRT3 Transcriptional regulator, LysR family n=1 Tax=V... 309 5e-83 UniRef50_A4YPA1 Putative transcriptional regulator, LysR family ... 309 5e-83 UniRef50_B0BQD1 HTH-type transcriptional activator n=15 Tax=Prot... 309 6e-83 UniRef50_Q8YZV2 Transcriptional regulator n=2 Tax=Nostocaceae Re... 309 8e-83 UniRef50_Q2IYM8 Transcriptional regulator, LysR family n=2 Tax=R... 309 8e-83 UniRef50_Q0BPL7 Transcriptional regulators, LysR family n=1 Tax=... 308 2e-82 UniRef50_A6EYC4 LysR family regulatory protein n=1 Tax=Marinobac... 308 2e-82 UniRef50_D0LKM3 Transcriptional regulator, LysR family n=1 Tax=H... 308 2e-82 UniRef50_C9NXV6 Transcriptional regulator LysR family n=1 Tax=Vi... 307 3e-82 UniRef50_A1U2R6 Transcriptional regulator, LysR family n=3 Tax=M... 307 4e-82 UniRef50_B8KV86 Putative transcriptional regulator, LysR family ... 306 4e-82 UniRef50_Q12H69 Transcriptional regulator, LysR family n=14 Tax=... 306 5e-82 UniRef50_B7WQP0 Transcriptional regulator, LysR family n=1 Tax=C... 306 5e-82 UniRef50_Q0ARX0 Transcriptional regulator, LysR family n=1 Tax=M... 306 5e-82 UniRef50_A6VUW1 Transcriptional regulator, LysR family n=2 Tax=M... 306 6e-82 UniRef50_A6EW06 Transcriptional regulator n=2 Tax=Marinobacter R... 306 7e-82 UniRef50_Q13QG3 Transcriptional regulator, LysR family n=9 Tax=P... 306 7e-82 UniRef50_B2JSH4 Transcriptional regulator, LysR family n=2 Tax=B... 306 9e-82 UniRef50_A0LD87 Transcriptional regulator, LysR family n=1 Tax=M... 305 1e-81 UniRef50_A1U1I0 Transcriptional regulator, LysR family n=67 Tax=... 305 1e-81 UniRef50_Q1GMN1 Transcriptional regulator, LysR family n=1 Tax=R... 304 2e-81 UniRef50_D1TCI7 LysR family transcriptional regulator n=2 Tax=Bu... 304 3e-81 UniRef50_Q5LKP3 Transcriptional regulator, LysR family n=1 Tax=R... 304 3e-81 UniRef50_A9FW21 Transcriptional regulator, LysR family n=2 Tax=M... 304 3e-81 UniRef50_Q1LD16 Transcriptional regulator, LysR family n=8 Tax=P... 303 4e-81 UniRef50_Q13JD9 Transcriptional regulator, LysR family n=1 Tax=B... 303 4e-81 UniRef50_Q13YH7 Transcriptional regulator, LysR family n=12 Tax=... 303 6e-81 UniRef50_Q30XG7 Conserved hypothetical transcriptional regulator... 303 6e-81 UniRef50_B0C7Y6 Transcriptional regulator, LysR family n=1 Tax=A... 303 6e-81 UniRef50_B7V4S2 Probable transcriptional regulator n=7 Tax=Pseud... 302 9e-81 UniRef50_A8V9B9 LysR-like regulatory protein n=2 Tax=Betaproteob... 302 1e-80 UniRef50_Q0VLU8 Transcriptional regulator, LysR family n=2 Tax=A... 302 1e-80 UniRef50_Q7W2A6 Transcriptional regulator n=3 Tax=Bordetella Rep... 301 2e-80 UniRef50_A5W6Q9 Transcriptional regulator, LysR family n=12 Tax=... 300 4e-80 UniRef50_Q393U0 Transcriptional regulator, LysR family n=6 Tax=B... 300 4e-80 UniRef50_A9AQX4 Transcriptional regulator, LysR family n=20 Tax=... 299 6e-80 UniRef50_A8GG55 Transcriptional regulator, LysR family n=1 Tax=S... 298 2e-79 UniRef50_Q1MWN1 LysR-type regulatory protein n=1 Tax=Sphingomona... 297 2e-79 UniRef50_A9CLK9 Transcriptional regulator, LysR family n=2 Tax=A... 297 3e-79 UniRef50_A9FB16 Transcriptional regulator, LysR family n=3 Tax=S... 297 3e-79 UniRef50_Q1R0T8 Transcriptional regulator, LysR family n=9 Tax=G... 296 5e-79 UniRef50_Q2G901 Transcriptional regulator, LysR family n=2 Tax=A... 296 5e-79 UniRef50_A9GGP1 LysR-family transcriptional regulator n=1 Tax=So... 296 6e-79 UniRef50_C6DDI5 Transcriptional regulator, LysR family n=4 Tax=E... 296 6e-79 UniRef50_Q1N663 Regulatory protein, LysR:LysR, substrate-binding... 296 7e-79 UniRef50_C4KB22 Transcriptional regulator, LysR family n=37 Tax=... 296 8e-79 UniRef50_A3Y808 Transcriptional regulator, LysR family protien n... 296 8e-79 UniRef50_Q3JR86 LysR-family regultor n=70 Tax=Proteobacteria Rep... 295 1e-78 UniRef50_Q46YJ7 Transcriptional regulator, LysR family n=5 Tax=c... 295 2e-78 UniRef50_A4XX96 Transcriptional regulator, LysR family n=3 Tax=P... 295 2e-78 UniRef50_A9AQZ4 Transcriptional regulator, LysR family n=24 Tax=... 295 2e-78 UniRef50_A6FYP7 Transcriptional regulator, LysR family protein n... 294 2e-78 UniRef50_Q08NF6 Transcriptional Regulator, LysR family n=1 Tax=S... 294 2e-78 UniRef50_Q89IY7 Transcriptional regulatory protein n=1 Tax=Brady... 294 2e-78 UniRef50_C5AL93 Transcriptional regulator, LysR family protein n... 294 3e-78 UniRef50_Q2KYC5 LysR-family transcriptional regulator n=9 Tax=Bu... 294 3e-78 UniRef50_Q0SCY7 Transcriptional regulator, LysR family protein n... 292 6e-78 UniRef50_A6VSJ2 Transcriptional regulator, LysR family n=28 Tax=... 292 7e-78 UniRef50_C5CVL6 Transcriptional regulator, LysR family n=5 Tax=c... 292 8e-78 UniRef50_B7RYN1 Transcriptional regulator, LysR family protein n... 292 8e-78 UniRef50_A6X639 Transcriptional regulator, LysR family n=1 Tax=O... 292 9e-78 UniRef50_A1VMI6 Transcriptional regulator, LysR family n=28 Tax=... 291 2e-77 UniRef50_B0C4T0 Transcriptional regulator, LysR family n=1 Tax=A... 291 2e-77 UniRef50_A6W028 Transcriptional regulator, LysR family n=1 Tax=M... 291 2e-77 UniRef50_B5XYZ1 Transcriptional regulator, LysR family n=5 Tax=K... 291 2e-77 UniRef50_Q13GK2 Transcriptional regulator, LysR family n=1 Tax=B... 291 3e-77 UniRef50_Q15XJ4 Transcriptional regulator, LysR family n=1 Tax=P... 291 3e-77 UniRef50_A3YHF6 Transcriptional regulatory protein n=2 Tax=Gamma... 290 3e-77 UniRef50_A4Z170 Putative transcriptional regulatory protein, Lys... 290 4e-77 UniRef50_A7JRS0 Possible LysR family transcriptional regulator n... 290 4e-77 UniRef50_A1U8Q8 Transcriptional regulator, LysR family n=1 Tax=M... 290 4e-77 UniRef50_Q391Q9 Transcriptional regulator, LysR family n=1 Tax=B... 290 4e-77 UniRef50_D2YJX0 Transcriptional regulator, LysR family n=1 Tax=V... 289 5e-77 UniRef50_A3QJ07 Transcriptional regulator, LysR family n=25 Tax=... 289 6e-77 UniRef50_Q8XRG7 Probable transcriptional regulator transcription... 289 8e-77 UniRef50_Q2BJ61 Transcriptional regulator, LysR family protein n... 289 9e-77 UniRef50_B6JAE3 MexT protein n=1 Tax=Oligotropha carboxidovorans... 289 1e-76 UniRef50_B7RV99 Transcriptional regulator, LysR family protein n... 288 2e-76 UniRef50_A5F4D9 Transcriptional regulator, LysR family n=68 Tax=... 288 2e-76 UniRef50_Q7MFJ9 Transcriptional regulator n=28 Tax=Vibrio RepID=... 288 2e-76 UniRef50_B4E7M9 LysR family regulatory protein n=1 Tax=Burkholde... 287 2e-76 UniRef50_Q88I06 Nodulation protein d1 n=4 Tax=Gammaproteobacteri... 287 2e-76 UniRef50_Q687Z9 LysR-type activator n=1 Tax=Sphingopyxis macrogo... 287 3e-76 UniRef50_D1SW87 Transcriptional regulator, LysR family n=1 Tax=A... 287 3e-76 UniRef50_A9FJR3 Transcriptional regulator, LysR family n=2 Tax=S... 287 3e-76 UniRef50_B9J825 Nod transcriptional regulator protein n=1 Tax=Ag... 287 3e-76 UniRef50_C4I668 Transcriptional regulator, LysR family n=80 Tax=... 287 3e-76 UniRef50_C5CZA2 Transcriptional regulator, LysR family n=1 Tax=V... 287 3e-76 UniRef50_C0ZNV8 Putative LysR family transcriptional regulator n... 287 3e-76 UniRef50_Q46T42 Regulatory protein, LysR:LysR, substrate-binding... 287 4e-76 UniRef50_B1J7P4 Transcriptional regulator, LysR family n=5 Tax=P... 287 4e-76 UniRef50_Q081Z6 Transcriptional regulator, LysR family n=1 Tax=S... 286 5e-76 UniRef50_B7CP85 Transcriptional regulator, LysR family protein n... 286 5e-76 UniRef50_Q4KHX1 Transcriptional regulator, LysR family n=1 Tax=P... 286 6e-76 UniRef50_P52679 PCP degradation transcriptional activation prote... 286 6e-76 UniRef50_Q0K3U9 Transcriptional regulator, LysR-family n=2 Tax=B... 286 6e-76 UniRef50_B9B1S8 Transcriptional regulator, LysR family n=1 Tax=B... 286 6e-76 UniRef50_Q5LN55 Transcriptional regulator, LysR family n=4 Tax=R... 286 7e-76 UniRef50_A5WDE8 Transcriptional regulator, LysR family n=1 Tax=P... 286 8e-76 UniRef50_A9C385 Transcriptional regulator, LysR family n=2 Tax=c... 286 8e-76 UniRef50_A0KH33 Transcriptional regulator, LysR family n=2 Tax=A... 285 1e-75 UniRef50_A5F3E5 Transcriptional regulator, LysR family n=29 Tax=... 285 1e-75 UniRef50_D0RY94 Transcriptional regulator n=4 Tax=Acinetobacter ... 285 1e-75 UniRef50_D1P5Q9 Transcriptional regulator, LysR family n=1 Tax=P... 285 2e-75 UniRef50_B7VJC4 Putative LysR-like regular protein n=4 Tax=Vibri... 284 2e-75 UniRef50_C6XR04 Transcriptional regulator, LysR family n=1 Tax=H... 284 2e-75 UniRef50_A3VWI6 Transcriptional regulatory protein n=1 Tax=Roseo... 284 2e-75 UniRef50_A3VAM0 Nodulation protein d1 n=1 Tax=Rhodobacterales ba... 284 4e-75 UniRef50_Q9FD34 PnbR n=2 Tax=Pseudomonas RepID=Q9FD34_PSEPU 283 4e-75 UniRef50_B9JQ31 Transcriptional regulator n=1 Tax=Agrobacterium ... 283 4e-75 UniRef50_A5V8P8 Transcriptional regulator, LysR family n=1 Tax=S... 283 5e-75 UniRef50_A4XRF8 Transcriptional regulator, LysR family n=2 Tax=P... 283 5e-75 UniRef50_B9Z7Z3 Transcriptional regulator, LysR family n=3 Tax=P... 283 6e-75 UniRef50_A7K354 LysR substrate binding domain protein n=17 Tax=G... 283 6e-75 UniRef50_A4JED2 Transcriptional regulator, LysR family n=9 Tax=P... 283 6e-75 UniRef50_A1UYR8 Transcriptional regulator, LysR family n=32 Tax=... 282 6e-75 UniRef50_A6ARN3 Transcriptional regulator, LysR family n=4 Tax=V... 282 7e-75 UniRef50_A1UXD8 Transcriptional regulator, LysR family n=41 Tax=... 282 8e-75 UniRef50_Q46MT9 Regulatory protein, LysR:LysR, substrate-binding... 282 1e-74 UniRef50_B4RWU1 Transcriptional regulator n=2 Tax=Alteromonas ma... 282 1e-74 UniRef50_Q2CCM2 Transcriptional regulator, LysR family protein n... 281 2e-74 UniRef50_A4GJC2 Transcriptional regulator LysR family protein n=... 281 2e-74 UniRef50_C7RKX8 Transcriptional regulator, LysR family n=20 Tax=... 281 2e-74 UniRef50_B8ERS8 Transcriptional regulator, LysR family n=1 Tax=M... 281 2e-74 UniRef50_A0KIB7 Transcriptional regulator, LysR family n=2 Tax=A... 281 2e-74 UniRef50_A1UYG7 Transcriptional regulator, LysR family n=45 Tax=... 281 3e-74 UniRef50_A9R140 Substrate-binding transcriptional regulator, Lys... 280 4e-74 UniRef50_C5CZY6 Transcriptional regulator, LysR family n=1 Tax=V... 280 4e-74 UniRef50_Q7MC61 Transcriptional regulator n=9 Tax=Gammaproteobac... 280 4e-74 UniRef50_D0LUZ7 Transcriptional regulator, LysR family n=1 Tax=H... 280 5e-74 UniRef50_C6B2W9 Transcriptional regulator, LysR family n=4 Tax=R... 280 5e-74 UniRef50_Q081K6 Transcriptional regulator, LysR family n=2 Tax=A... 279 6e-74 UniRef50_D1RUJ7 Transcriptional regulatory protein n=1 Tax=Serra... 279 6e-74 UniRef50_Q210Z5 Transcriptional regulator, LysR family n=2 Tax=A... 279 6e-74 UniRef50_Q5E7C7 Transcriptional regulator, LysR family n=5 Tax=V... 279 7e-74 UniRef50_Q7NT25 Probable transcription regulator protein n=1 Tax... 279 1e-73 UniRef50_Q7D3I0 Transcriptional regulator, LysR family n=1 Tax=A... 279 1e-73 UniRef50_B7VQV6 Transcriptional regulator n=10 Tax=Vibrionales R... 278 1e-73 UniRef50_B5ZVD7 Transcriptional regulator, LysR family n=4 Tax=R... 278 2e-73 UniRef50_Q1M9F6 Putative LysR-family transcriptional regulator n... 278 2e-73 UniRef50_D2C014 Transcriptional regulator, LysR family n=1 Tax=D... 277 2e-73 UniRef50_C6BS61 Transcriptional regulator, LysR family n=1 Tax=D... 277 2e-73 UniRef50_A6FY23 Transcriptional regulator, LysR family protein n... 277 2e-73 UniRef50_Q471I4 Regulatory protein, LysR:LysR, substrate-binding... 277 2e-73 UniRef50_A1R1P0 Putative transcriptional regulator, LysR family ... 277 2e-73 UniRef50_A5VCH0 Transcriptional regulator, LysR family n=1 Tax=S... 277 3e-73 UniRef50_Q0BYJ0 Transcriptional regulator, LysR family n=1 Tax=H... 277 3e-73 UniRef50_A3RSL5 Transcriptional regulators, LysR family n=4 Tax=... 277 4e-73 UniRef50_Q5E2I6 DNA-binding transcriptional activator n=65 Tax=G... 277 4e-73 UniRef50_B7VQ45 Transcriptional regulator n=8 Tax=Vibrionales Re... 276 5e-73 UniRef50_A2SDX3 Transcriptional regulator, LysR family n=6 Tax=B... 276 7e-73 UniRef50_A0K340 Transcriptional regulator, LysR family n=1 Tax=B... 276 7e-73 UniRef50_B5JUQ0 Transcriptional regulator, LysR family, putative... 276 7e-73 UniRef50_Q399F7 Transcriptional regulator, LysR family n=1 Tax=B... 276 8e-73 UniRef50_A6CYZ8 Hypothetical transcriptional regulator, LysR fam... 276 9e-73 UniRef50_B7QWJ8 Transcriptional regulator, LysR family n=1 Tax=R... 276 1e-72 UniRef50_Q15TE0 Transcriptional regulator, LysR family n=4 Tax=A... 275 1e-72 UniRef50_Q7WJY9 Probable LysR-family transcription regulator n=1... 275 2e-72 UniRef50_C9PC13 Transcriptional regulator LysR family n=1 Tax=Vi... 275 2e-72 UniRef50_Q7MQI2 Transcriptional regulator n=36 Tax=Gammaproteoba... 274 2e-72 UniRef50_Q2SHJ0 Transcriptional regulator n=1 Tax=Hahella chejue... 274 2e-72 UniRef50_B6RAE8 Transcriptional Regulator, LysR family n=1 Tax=P... 274 2e-72 UniRef50_A8KZI9 Transcriptional regulator, LysR family n=4 Tax=A... 274 2e-72 UniRef50_C5CV67 Transcriptional regulator, LysR family n=1 Tax=V... 274 3e-72 UniRef50_Q7MCZ8 Transcriptional regulator n=13 Tax=Vibrionaceae ... 274 3e-72 UniRef50_A3YI62 Transcriptional regulator, LysR family protein n... 274 4e-72 UniRef50_Q0BCW3 Transcriptional regulator, LysR family n=30 Tax=... 273 4e-72 UniRef50_Q88LJ0 Transcriptional regulator, LysR family n=1 Tax=P... 273 4e-72 UniRef50_B0KG68 Transcriptional regulator, LysR family n=9 Tax=P... 273 4e-72 UniRef50_A4XED3 Transcriptional regulator, LysR family n=1 Tax=N... 273 6e-72 UniRef50_UPI0000383CFA COG0583: Transcriptional regulator n=1 Ta... 273 6e-72 UniRef50_A5VEA0 Transcriptional regulator, LysR family n=1 Tax=S... 272 7e-72 UniRef50_Q5QVJ9 Transcriptional regulator, LysR family n=1 Tax=I... 272 8e-72 UniRef50_A6CXP0 Transcriptional regulator, LysR family protein n... 272 9e-72 UniRef50_D1P3H6 Transcriptional regulator, LysR family n=1 Tax=P... 272 1e-71 UniRef50_B7VQ63 Transcriptional regulators, LysR family n=3 Tax=... 272 1e-71 UniRef50_A6V8B0 Transcriptional regulator, LysR family n=10 Tax=... 272 1e-71 UniRef50_C7RD08 Transcriptional regulator, LysR family n=1 Tax=K... 272 1e-71 UniRef50_A1WMY5 Transcriptional regulator, LysR family n=1 Tax=V... 272 1e-71 UniRef50_B2JFW9 Transcriptional regulator, LysR family n=39 Tax=... 271 1e-71 UniRef50_Q7MEK1 Transcriptional regulator n=15 Tax=Vibrionaceae ... 271 2e-71 UniRef50_A1U796 Transcriptional regulator, LysR family n=3 Tax=M... 271 2e-71 UniRef50_B2JTT0 Transcriptional regulator, LysR family n=3 Tax=B... 271 2e-71 UniRef50_A7HRT9 Transcriptional regulator, LysR family n=1 Tax=P... 271 2e-71 UniRef50_A1K8D7 Transcriptional regulator, LysR family n=1 Tax=A... 271 3e-71 UniRef50_B9Z947 Transcriptional regulator, LysR family n=1 Tax=L... 270 5e-71 UniRef50_D2B6V0 LysR family transcriptional regulator n=5 Tax=Ac... 270 5e-71 UniRef50_B0TPA4 Transcriptional regulator, LysR family n=2 Tax=S... 269 6e-71 UniRef50_A8H6N4 Transcriptional regulator, LysR family n=3 Tax=S... 269 6e-71 UniRef50_A8H3B3 Transcriptional regulator, LysR family n=7 Tax=G... 269 6e-71 UniRef50_A4SSQ1 Transcriptional regulator, LysR family n=2 Tax=A... 269 8e-71 UniRef50_A8TNA4 Transcriptional regulator MexT n=1 Tax=alpha pro... 269 9e-71 UniRef50_Q1GFT2 Transcriptional regulator, LysR family n=1 Tax=R... 269 1e-70 UniRef50_A9BZQ9 Transcriptional regulator, LysR family n=1 Tax=D... 269 1e-70 UniRef50_B1K4K0 Transcriptional regulator, LysR family n=3 Tax=B... 269 1e-70 UniRef50_A8IJ97 Putative transcriptional regulator n=1 Tax=Azorh... 269 1e-70 UniRef50_UPI0001B54141 LysR family transcriptional regulator n=1... 269 1e-70 UniRef50_A0KG94 Transcriptional regulator, LysR family n=5 Tax=G... 268 1e-70 UniRef50_A0NZC9 LysR family regulatory protein n=3 Tax=Rhodobact... 268 2e-70 UniRef50_P77746 Uncharacterized HTH-type transcriptional regulat... 268 2e-70 UniRef50_A8FU12 Transcriptional regulator n=2 Tax=Gammaproteobac... 268 2e-70 UniRef50_B4ELV6 LysR family regulatory protein n=1 Tax=Burkholde... 267 2e-70 UniRef50_A0JW61 Transcriptional regulator, LysR family n=1 Tax=A... 267 3e-70 UniRef50_A6V5Q0 MexT protein n=1 Tax=Pseudomonas aeruginosa PA7 ... 267 3e-70 UniRef50_Q2BMZ3 Putative transcriptional regulator, LysR family ... 267 3e-70 UniRef50_B7X2W7 Transcriptional regulator, LysR family n=1 Tax=C... 267 4e-70 UniRef50_D0RZK6 Transcriptional regulator n=1 Tax=Acinetobacter ... 267 4e-70 UniRef50_B5XRQ2 Transcriptional regulator, LysR family n=4 Tax=K... 267 5e-70 UniRef50_B8IVY8 Transcriptional regulator, LysR family n=4 Tax=P... 266 6e-70 UniRef50_A6GJJ5 Regulatory protein, LysR:LysR, substrate-binding... 266 6e-70 UniRef50_A4WEP5 Transcriptional regulator, LysR family n=1 Tax=E... 266 6e-70 UniRef50_B9K150 Transcriptional regulator LysR family n=1 Tax=Ag... 266 7e-70 UniRef50_B1MJW3 Putative transcriptional regulator, LysR family ... 266 8e-70 UniRef50_C4V039 Transcriptional regulator, LysR family n=4 Tax=E... 266 8e-70 UniRef50_C3MFM7 Putative transcriptional regulator, LysR family ... 266 9e-70 UniRef50_A3VA58 Transcriptional regulatory protein n=2 Tax=cellu... 265 1e-69 UniRef50_A5V6I2 Transcriptional regulator, LysR family n=1 Tax=S... 265 1e-69 UniRef50_Q4KCL9 Transcriptional regulator, LysR family n=15 Tax=... 265 1e-69 UniRef50_Q38ZY8 Transcriptional regulator, LysR family n=1 Tax=B... 265 1e-69 UniRef50_P55359 Nodulation protein D 1 n=250 Tax=Proteobacteria ... 265 2e-69 UniRef50_Q122D0 Transcriptional regulator, LysR family n=1 Tax=P... 265 2e-69 UniRef50_C5A8T0 Transcriptional regulator, LysR family protein n... 265 2e-69 UniRef50_Q8KY13 LysR-type transcriptional activator n=1 Tax=Rhiz... 264 2e-69 UniRef50_Q0JY95 Transcriptional regulator, LysR-family n=4 Tax=P... 264 2e-69 UniRef50_D0FZR1 LysR-type transcriptional regulator n=2 Tax=Rhod... 264 2e-69 Sequences not found previously or not previously below threshold: >UniRef50_C3KKF8 Putative transcriptional regulatory protein, LysR-family n=1 Tax=Rhizobium sp. NGR234 RepID=C3KKF8_RHISN Length = 304 Score = 333 bits (855), Expect = 5e-90, Method: Composition-based stats. Identities = 59/300 (19%), Positives = 113/300 (37%), Gaps = 4/300 (1%) Query: 2 ANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSG 61 ++ DLNLLV+F+ + ++AAE + +T AVS +L RLRA F DPLF+RS Sbjct: 1 MKPVNIASIDLNLLVVFDALVAEGHATRAAERIGLTQPAVSHALNRLRALFGDPLFVRSP 60 Query: 62 KGIAPTTTGLNLHHHLEKNLRGLEQTIN---IVNKSELKKNFIIYGPQLISCSNNSMLIR 118 +G+ T L+ + L +E ++ E + F++ + L Sbjct: 61 RGMVATPAALDAAPAIRSILEQVEVVLSGGPAFEPEESTRQFVLGLSDYAAFVLLPRLTA 120 Query: 119 CLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICS 178 L +++ I S +L +L+ P + L+ Sbjct: 121 RLEREAP-NISLVIRNTSHGVGLPMLEEGSVELIAGNFPGPPSHMREELLYEEDFVCAGR 179 Query: 179 NRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSI 238 HP + ++ ++ Q+ ++ + + ER + RK++ L + Sbjct: 180 GDHPALAYPLDLDRYLSLRHLQVSTRGNPHGYVDAVLAERGLKRKVAVTVGHFLMAPFLV 239 Query: 239 AVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 +DL+ P L+ L L+ LP ++ +++ + L E Sbjct: 240 DSSDLVATEPRRLFEPMPSRLPLRFFAPPIDLPPFRVVQAWHARHEADPGHQWLRRVLRE 299 >UniRef50_Q2S713 Transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S713_HAHCH Length = 329 Score = 332 bits (853), Expect = 7e-90, Method: Composition-based stats. Identities = 64/293 (21%), Positives = 131/293 (44%), Gaps = 3/293 (1%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 ++ DLNLLVIF+ I SIS AAE L +T AVS ++ R+R +NDPLF+++G+GI P Sbjct: 1 MRNIDLNLLVIFDAIMTESSISGAAERLSMTQPAVSNAVARMRQVWNDPLFVKNGRGIQP 60 Query: 67 TTTGLNLHHHLEKNLRGLEQTINI--VNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDS 124 TT L+L H + L L+ +N + S ++ F + + + + R + ++ Sbjct: 61 TTHALSLWHQVSGPLIQLKDAVNPQDFDPSTTRRRFRVGMSDITTDLIWLPMRRMVETEA 120 Query: 125 SVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRI 184 I+ H + + N+E +L + + DL++ M S L HP Sbjct: 121 P-NIDLHAVPANGNNSESILTNGEVDLIVGVMQEFRTSFRNDFLFESDYVCAMRKDHPLA 179 Query: 185 TDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLL 244 + T E+ + + + + + + ++ ++R+++ + ++ + +DL+ Sbjct: 180 AEPLTLEKYLKADHLLVSLTGEATGFVDITLSQQGLSRRVAMTVNHFASVPALLEGSDLI 239 Query: 245 GIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLN 297 IVP + +L K + + + ++ + +++ Sbjct: 240 SIVPNMVIAKGAKCGSLHVTKPPLEIRPTPVSMIWHARHDRDPGVLWLREKIK 292 >UniRef50_B9Z480 Transcriptional regulator, LysR family n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z480_9NEIS Length = 303 Score = 331 bits (850), Expect = 2e-89, Method: Composition-based stats. Identities = 72/297 (24%), Positives = 126/297 (42%), Gaps = 5/297 (1%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 ++ D+ LL +F+ IY+ S+++AA++L + AVS +L +LR F+DPLF+R G+ P Sbjct: 1 MQTADVRLLQVFDEIYKTRSVTRAADNLGLGQPAVSIALAKLREHFDDPLFVRIANGMEP 60 Query: 67 TTTGLNLHHHLEKNLRGLEQTIN---IVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQD 123 T L H + + L L+ + + ++ F I + L LR+ Sbjct: 61 TPMARELEHAVRQALDALDLVFGHRIDFDPASSERTFCISMTDISQLVLLPKLWAQLRKT 120 Query: 124 SSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPR 183 S + + +SAE +L +ADL + MP + L R + S HPR Sbjct: 121 SP-GVHIDIVPLSAE-TPRMLETGEADLALGFMPQLEAGFYQQSLFRQRYVCVASTDHPR 178 Query: 184 ITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDL 243 I D T Q EE + S G + EI + + R I+ R + L I + TD+ Sbjct: 179 IHDELTLAQFETEEHAVVTSSGTGHLILDREIARQGITRHIALRVPNYLGIAFVVEQTDM 238 Query: 244 LGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 L +P L + + LP + +++ ++ +++ Sbjct: 239 LVTIPERLAQVLEGRGRFRVFPVPFELPDYAVKQHWHERYHHDPGNRWLRRVISDLL 295 >UniRef50_A6T413 Transcriptional regulator, LysR family n=1 Tax=Janthinobacterium sp. Marseille RepID=A6T413_JANMA Length = 302 Score = 331 bits (849), Expect = 2e-89, Method: Composition-based stats. Identities = 61/301 (20%), Positives = 129/301 (42%), Gaps = 6/301 (1%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 ++ DLNLLV F+ I + +++ AA L ++ A+S +L RLR FNDPLF+R+ +G+ Sbjct: 1 MNIASVDLNLLVAFDAIVKERNVTSAAVRLGVSQPAMSNALARLRIIFNDPLFVRTSQGM 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 PT L + + + + ++ + + K F Y ++ L++ ++ Sbjct: 61 QPTPYAEQLIEPVSRACELITSALQINSVFDPATTTKTFSFYMTEIGEILLLPKLLKHIQ 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 + + + A+E + + + DL + P + L+T + I H Sbjct: 121 VAAP-NACVRVRRIPEQGAKEAMANGEIDLAVGLFPYLKAGFYQQRLYTDKFACIVRQGH 179 Query: 182 PRITDNSTYEQIMAEEFTQLISKSAGV-DDIQMEIDERFMNRKISFRGSSLLTIINSIAV 240 P + D+ T +Q + ++S + G I+ + + RKI + L + I Sbjct: 180 PTVHDSLTPQQYVDTPHVIVMSANTGHDAAIEKILLTEHLRRKIVMTSQNFLVLPMIIEQ 239 Query: 241 TDLLGIVPYELYNSYRDFL-NLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNES 299 TD + +P+ + + +K ++ P P++ + +++ + D + Sbjct: 240 TDAIATIPFRMAQKIASYSTGIKILESPIPFPNVDIKQHWHERFHYDPANKWMRDLMVTL 299 Query: 300 F 300 F Sbjct: 300 F 300 >UniRef50_B1KAV0 Transcriptional regulator, LysR family n=5 Tax=Burkholderia cepacia complex RepID=B1KAV0_BURCC Length = 345 Score = 327 bits (839), Expect = 3e-88, Method: Composition-based stats. Identities = 66/299 (22%), Positives = 132/299 (44%), Gaps = 5/299 (1%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 D+++ DLNLL +F+ + + +++A S+ ++ A+S +L +LR F DPLF+R+G+G+ Sbjct: 1 MDIRQVDLNLLKVFDALLKKRHVTQAGVSIGLSQPAMSYALSKLRELFEDPLFVRTGRGM 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 PT L + + L ++ I +E +NF++ + L L Sbjct: 61 EPTPRAQALGEPVARLLDLVQTEILPMPEFRPAESSRNFVLCMSDIGEMVFLPRLESFLD 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVI-SRSVICMPLHTIRNTLICSNR 180 + + + + +S EE L DL I P + S S+ L+ I + Sbjct: 121 KAAP-HVSIKTVALSMPELEEGLASGDVDLAIGYFPGLNSESLKRKALYRHSYVCIARDD 179 Query: 181 HPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAV 240 HP I D + +Q A + + D + + + + F + + +A Sbjct: 180 HPEIGDTLSLDQYRAAAHVMVHPEGREQDVLARTHERLGIRVNVRFSTPRFIGVPFVVAG 239 Query: 241 TDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNES 299 +D++ VP + + +F+N+K + L P P+ +LY+ ++ + D ++E Sbjct: 240 SDMIAAVPQAVGRRFAEFVNVKLLPLPFPAPTYELYLHWHPRFHHEPANRWIRDAMSEL 298 >UniRef50_P10183 HTH-type transcriptional activator nahR n=67 Tax=Bacteria RepID=NAHR_PSEPU Length = 300 Score = 325 bits (835), Expect = 1e-87, Method: Composition-based stats. Identities = 61/299 (20%), Positives = 118/299 (39%), Gaps = 4/299 (1%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 +L+ DLNLLV+F + +S AE+L +T AVS +L+RLR DPLF+R+ +G+ Sbjct: 1 MELRDLDLNLLVVFNQLLVDRRVSITAENLGLTQPAVSNALKRLRTSLQDPLFVRTHQGM 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 PT +L + + L + + ++ F + + L+ L Sbjct: 61 EPTPYAAHLAEPVTSAMHALRNALQHHESFDPLTSERTFTLAMTDIGEIYFMPRLMDVLA 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 + + + S+ + + L + DL + +P + L +C H Sbjct: 121 HQAPNCV-ISTVRDSSMSLMQALQNGTVDLAVGLLPNLQTGFFQRRLLQNHYVCLCRKDH 179 Query: 182 PRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVT 241 P + T E+ + ++I+ G ++ + + R I + + + T Sbjct: 180 PVTREPLTLERFCSYGHVRVIAAGTGHGEVDTYMTRVGIRRDIRLEVPHFAAVGHILQRT 239 Query: 242 DLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 DLL VP L + + L + LP I + + ++ +L + + F Sbjct: 240 DLLATVPIRLADCCVEPFGLSALPHPVVLPEIAINMFWHAKYHKDLANIWLRQLMFDLF 298 >UniRef50_C6XIT5 Transcriptional regulator, LysR family n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XIT5_HIRBI Length = 318 Score = 325 bits (834), Expect = 1e-87, Method: Composition-based stats. Identities = 60/295 (20%), Positives = 122/295 (41%), Gaps = 4/295 (1%) Query: 8 KKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPT 67 KKFDLNLL F+ +++ ++++AA L +T AVS +L RLR F D LFIR+ G+ PT Sbjct: 3 KKFDLNLLNTFDALWRERNVTRAARRLNVTQPAVSNALSRLRETFGDELFIRTPSGVDPT 62 Query: 68 TTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDS 124 + + + LR +E+T+ + + + ++ F I L+ LR+ + Sbjct: 63 ERCSEIAIDVREALRHVERTLASHDSFDPTVSERTFRIGAMDYFDHVVLPPLMEDLRKKA 122 Query: 125 SVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRI 184 ++ + + L D + + + P+ + LI HP++ Sbjct: 123 P-RVDLRISPVKLGETYDALDSGDLDFLFFSGTEPPKRINFSPMLEEKFVLIMRANHPKM 181 Query: 185 TDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLL 244 T + ++ I + E + R+++ S +I ++ TD++ Sbjct: 182 CQEMTLDAYADLTHIVFSTRGDSHTRIDDLLAENGLRRRVALTSSHHTSIAETVRDTDMV 241 Query: 245 GIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNES 299 + P L + Y L ++ P L + +++ ++ + L + Sbjct: 242 ALSPSRLAHRYVHRGGLIAVQPPVEFPHFHLRLYWSRRLNSDPGAMWLRNILGDV 296 >UniRef50_A9G5G2 Nodulation protein D n=2 Tax=Proteobacteria RepID=A9G5G2_SORC5 Length = 366 Score = 324 bits (832), Expect = 2e-87, Method: Composition-based stats. Identities = 58/303 (19%), Positives = 122/303 (40%), Gaps = 9/303 (2%) Query: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 M +D+ DLNL+ + + +++A + L +T SA S +L RLR F DPLF+R+ Sbjct: 57 MPAFHDVASVDLNLVRVLGALLDERHLTRAGKRLGLTQSATSHALGRLRRLFGDPLFVRT 116 Query: 61 GKGIAPTTTGLNLHHHLEKNLRGLEQ---TINIVNKSELKKNFIIYGPQLISCSNNSMLI 117 +G+APT L + + +R L++ + ++F + S L+ Sbjct: 117 SRGLAPTARAEELAEPVREAMRALDRCFRAEEPFVAASAARSFSVATADYGSFVLAPKLL 176 Query: 118 RCL-RQDSSVEIECHDILMSAENAEELLVHRKADLVITQ--MPVISRSVICMPLHTIRNT 174 L R+ +V++ + S EE L AD+V+ + + L+ R Sbjct: 177 DRLGREAPNVDLWLRALDAS---FEEQLARGDADVVVAPARRDGLPAGIHSRLLYRERFA 233 Query: 175 LICSNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTI 234 + HP + + + + + + + R+++ L Sbjct: 234 CLVRKGHPLVKKGIDLASWTSMRHVFIAPRGTPGGVVDETLAQLGKRRRVALAVPHFLLA 293 Query: 235 INSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFID 294 + +A +DL+ V + ++ + L L+ + LP ++ + +++ + F D Sbjct: 294 PHVVAGSDLVVTVGARVAEAFAEILPLRVVDPPVKLPGFEVRMYWHERHHRDPAQQWFRD 353 Query: 295 RLN 297 + Sbjct: 354 AVR 356 >UniRef50_Q3KA14 LysR family regulatory protein n=24 Tax=Bacteria RepID=Q3KA14_PSEPF Length = 314 Score = 323 bits (829), Expect = 5e-87, Method: Composition-based stats. Identities = 65/300 (21%), Positives = 125/300 (41%), Gaps = 10/300 (3%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 +L K DLNL ++F+ IY ++++A + + IT AVS +L RLR FNDPLF+R+ +G+ Sbjct: 1 MNLSKVDLNLFIVFDAIYTEANLTRAGQIVGITQPAVSNALARLRETFNDPLFVRTAQGM 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 PT N+ + L L ++ N S+ K + I L L + LR Sbjct: 61 VPTPMAQNIIGPVRNALSLLRVSVQESRIFNPSQAVKTYRISMTDLTEAVILPPLFQRLR 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 + + + L + L + D + V + L R H Sbjct: 121 RLAP-TVIIESFLSKRRETTKELAAGRLDFAVDAPLNTDPQVRHVKLMEDRYVCAMRKGH 179 Query: 182 PRI-TDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAV 240 P + T + ++ + S+ +G+ + + + + + RKI+ R L + Sbjct: 180 PLATKEKFTLDDYLSLTHIHISSRRSGLGHVDLALGKMGIQRKIALRSQHYLMASQVLQQ 239 Query: 241 TDLLGIVPYELYNSYRDFLNLKEIKLEH-PLPSIKLYISYNKSSLNNLVFSRFIDRLNES 299 TD++ VP +L L +P ++ ++ +++S+ + +++ E Sbjct: 240 TDMVMTVPERFAR----RHDLHAFNLPVNDVPPVETHLYWHESTDQDPANRWMREQMIEL 295 >UniRef50_A0LD88 Transcriptional regulator, LysR family n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LD88_MAGSM Length = 312 Score = 321 bits (824), Expect = 2e-86, Method: Composition-based stats. Identities = 64/296 (21%), Positives = 123/296 (41%), Gaps = 4/296 (1%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 L KFDLNLLV F+ + +++A L IT +A+S +L+RLR F+DPLFI++G + P Sbjct: 9 LNKFDLNLLVAFDALMSERGVTRAGRRLGITQAAMSNTLRRLRTAFDDPLFIKTGARMEP 68 Query: 67 TTTGLNLHHHLEKNLRGLEQTIN--IVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDS 124 T + L +E L+ + ++ + + F + L+ L + + Sbjct: 69 TPRAMELSGMIEAALKQVHVALDNDSFDPANSHYVFRVGMVDYTVPLVFPALLDHLEKYA 128 Query: 125 SVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRI 184 I +++ + + E+L + DLV++++ R + + I I HP I Sbjct: 129 PNCI--LEVVNTGDFEGEMLESGEVDLVLSRLDQAPRGLKSRVVGEIPFVCIYRPGHPLI 186 Query: 185 TDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLL 244 + T EQ + + + + R + R S + +A TDL+ Sbjct: 187 KEPMTLEQYLQARHVHYYPPMVKEGLVDLGLKAINQERNVVVRLDSFGMVPTLVAETDLI 246 Query: 245 GIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 V + + + LK L P ++ + ++ S + F +++ Sbjct: 247 AAVTHTSAHVIAPAMGLKVQPLPFEAPPLQFVMVWHDRSEESAPHQWFREQVLHML 302 >UniRef50_Q2S7V2 Transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S7V2_HAHCH Length = 310 Score = 319 bits (820), Expect = 6e-86, Method: Composition-based stats. Identities = 62/299 (20%), Positives = 125/299 (41%), Gaps = 4/299 (1%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 + + DLNL V+F+ IY I++A+E L++T AVS +L RLR D LFIRS +G+ Sbjct: 1 MHISRIDLNLFVVFDAIYSEGGITRASEVLHLTQPAVSHALNRLRETLGDELFIRSSRGM 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 PT L + + L L++ + ++L+ +F + L LI+ R Sbjct: 61 TPTPYAHQLIGTVRQALNQLQRGLHQGQEFAPAQLETSFRLCVRDLFDVLLLPALIKNCR 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 + ++ + + E L + DL + S+ L R T + H Sbjct: 121 AIAP-KVVFNCLRSPREQILHDLASGRIDLAADVLISHDDSICHEKLFEDRLTCLLRRDH 179 Query: 182 PRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVT 241 P + + +++ Q+ S+ G +++ + RK+ R + + A + Sbjct: 180 PALASEWSLAEMLRWPHVQVSSREHGPGYEDIQLSRHGLQRKLGLRTPNFYGAALTAANS 239 Query: 242 DLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 DL+ P ++ + L+ + L ++ Y+ +++S+ ++ + Sbjct: 240 DLILCAPEQVARKLTQTIPLQVMPFPLTLNPLETYLYWHRSTDREPAHIWLREQTQRAL 298 >UniRef50_A1W256 Transcriptional regulator, LysR family n=2 Tax=Comamonadaceae RepID=A1W256_ACISJ Length = 323 Score = 319 bits (819), Expect = 7e-86, Method: Composition-based stats. Identities = 58/312 (18%), Positives = 115/312 (36%), Gaps = 15/312 (4%) Query: 2 ANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSG 61 + + DLNLL +F+ + ++++AAE L IT AVS +L+RLR D L R G Sbjct: 1 MQPLNFRTLDLNLLRVFDEVMAERNLTRAAEKLAITQPAVSNALRRLREVLGDELVTRRG 60 Query: 62 KGIAPTTTGLNLHHHLEKNLRGLEQTINI--VNKSELKKNFIIYGPQLISCSNNSMLIRC 119 G+ PT L L + L L++T++ + + + F++ + LI Sbjct: 61 HGVEPTPRALALWPAVRHALAQLQETLSPGRFDPASAQTTFVLAMADATGATLIPPLIEI 120 Query: 120 LRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSV------------ICMP 167 + +++ + + ++ + LL AD+ + P + + Sbjct: 121 VEREAP-GVSLRVVPLTTRDPRRLLDEESADMAVGYFPAVLADLTARAQSDNVVAHESTR 179 Query: 168 LHTIRNTLICSNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFR 227 L+ + + HP T + A + I + R+I Sbjct: 180 LYDSQYVCVMRADHPLAAVPMTLDLYCAARHLLVSFSGKPFGFIDGALAALGRERRIVLT 239 Query: 228 GSSLLTIINSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNL 287 + T +A TDLL ++P L L LP + + +++ ++ Sbjct: 240 VNQFFTAGRVVATTDLLTVLPRHFVGVASVRDELVWRPLPMTLPPVHVDALWHRRRNHDP 299 Query: 288 VFSRFIDRLNES 299 + + + Sbjct: 300 AHRWLREAIARA 311 >UniRef50_Q473Q1 Transcriptional regulator, LysR family n=9 Tax=Burkholderiaceae RepID=Q473Q1_RALEJ Length = 315 Score = 318 bits (817), Expect = 1e-85, Method: Composition-based stats. Identities = 67/302 (22%), Positives = 123/302 (40%), Gaps = 4/302 (1%) Query: 2 ANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSG 61 L + DLNL V+F+ IY SI+ AA L +T AVS +L RLR F+DPLF R G Sbjct: 1 MGAMQLSRIDLNLFVVFDAIYSEGSITAAARQLNLTQPAVSHALGRLRGLFDDPLFERRG 60 Query: 62 KGIAPTTTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIR 118 +G+APT +L + L+ +T+ + + + F I + + L+ Sbjct: 61 QGMAPTPLARSLASEVRSALQSFARTLQDTPHFDPTNTVRRFTIGMRDALESTLLPPLMA 120 Query: 119 CLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICS 178 + + ++E I E L+ D I + +S ++ ++ Sbjct: 121 RVTSVAP-QVEIAAIRFDRREMESELLAGTIDAAIDILLPVSPAIHHAQFMADPMIVLAR 179 Query: 179 NRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSI 238 HP + T E+ +A E + S+ G + + R++ R + Sbjct: 180 RDHPLVKKELTLERYLAAEHVHVSSRRRGAGLEDQALHRMGLTRRVRLRCQHYAAACRVV 239 Query: 239 AVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 + TDLL +P + + + L +PS++L++ ++ N+ ++L Sbjct: 240 SCTDLLATLPLRYARIANEPYANRILSLPFKVPSLELHLYWHAGGENDGANRWLREQLMA 299 Query: 299 SF 300 Sbjct: 300 VM 301 >UniRef50_B0C5B7 Transcriptional regulator, LysR-family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C5B7_ACAM1 Length = 300 Score = 316 bits (811), Expect = 6e-85, Method: Composition-based stats. Identities = 63/296 (21%), Positives = 124/296 (41%), Gaps = 5/296 (1%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 DL+ FDLNLLV+ + + S+SK AE L ++ AVS +L RLR DP+ +R G + Sbjct: 1 MDLRGFDLNLLVVLHILLKERSVSKTAERLQLSQPAVSAALNRLRTALKDPILVRDGLQM 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 PT L ++ + +EQT+ + S + + F I + L+ ++ Sbjct: 61 VPTPRAEQLVEPVQAIVSAIEQTLADPQPFDYSSISRTFRIATNDYGAFVLVPFLMNRMQ 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 + + + +I A + E L + DLVI + L + T + H Sbjct: 121 KIAP-HLTF-EIWDIALDVETALREGEIDLVIADAWTLRNCKCRKTLFSETFTCLVRQNH 178 Query: 182 PRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVT 241 PR+ T + + E+ + ++ ++ + + ++ R++ +L I +A T Sbjct: 179 PRVDTQLTMDDYLQEKHALVSARGRVTGNVDIALSQQNKQRQVQITLPHILAIPAMMAAT 238 Query: 242 DLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLN 297 D++ V + N + +L+ L + +++ N+ + L Sbjct: 239 DMIVTVATRIANRFAVDYHLQTFPPPITLDGFDIAMAWPHRMDNDTAIRWLRNELV 294 >UniRef50_C6ARG9 Transcriptional regulator, LysR family n=7 Tax=Proteobacteria RepID=C6ARG9_RHILS Length = 310 Score = 315 bits (808), Expect = 1e-84, Method: Composition-based stats. Identities = 59/294 (20%), Positives = 117/294 (39%), Gaps = 4/294 (1%) Query: 9 KFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTT 68 K+DLNLL +F + + ++++AAE L +T AVS +L RLR DPLFIR G+ PT Sbjct: 2 KYDLNLLPVFVALMEERNVTRAAEQLGMTQPAVSNALNRLRETLRDPLFIRERYGMKPTE 61 Query: 69 TGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSS 125 L + L L+ I + + + F I + +++ LR+ + Sbjct: 62 MAEALAPVIRGALASLDDVILGQQAFDPARATRQFTIAPNSYVEFVLMPVIVARLRECAP 121 Query: 126 VEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRIT 185 I + AE + ++V+ ++ +++ L + HP I Sbjct: 122 -GIRLRLTPFGNDLAETGAMSGATEMVLGRIVEPPDNMVVQHLMDDGLACVVRKDHPEIA 180 Query: 186 DNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLG 245 ++ + EQ ++ + + + + R +S + L + +AVTD Sbjct: 181 ESISEEQYQRMRHVNVLPPGRMRVGLFQMLQQAGLRRDVSVSVTHFLAVPEMVAVTDYCA 240 Query: 246 IVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNES 299 +P + + LK + L + ++++ N+ ++E Sbjct: 241 TLPRLICHRLARDPRLKVLPAPVDLGRFPVELAWHVRYRNDPAHRWLRSLISEV 294 >UniRef50_Q5P743 Transcriptional regulator, LysR family n=2 Tax=Betaproteobacteria RepID=Q5P743_AZOSE Length = 301 Score = 315 bits (808), Expect = 1e-84, Method: Composition-based stats. Identities = 69/298 (23%), Positives = 121/298 (40%), Gaps = 7/298 (2%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 ++ ++ L +F+ IY+ S+S+AAE+L + AVS +L +LR F DPLF+R+ G+ P Sbjct: 1 METLEIRQLSVFDEIYKTRSVSRAAENLGLGQPAVSIALGKLREHFGDPLFVRTSAGMEP 60 Query: 67 TTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQD 123 T G L + + + + + ++ F I + L LR Sbjct: 61 TPLGEELAEPIRVAVAAVSAASGHRAEFDPTRARRTFRIAMTDISQLVLLPRLWERLRTV 120 Query: 124 SS-VEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHP 182 + + I+ ++ + N +L + D+ + MP + L + S HP Sbjct: 121 APGIHIDIANL---SANTAGMLESGEVDVALGFMPQLEAGFYQQALFRQHYVCMASATHP 177 Query: 183 RITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTD 242 RI T Q AEE + + G I EI + + R++ R S + I + T Sbjct: 178 RIRRGLTLAQFEAEEHAVVSTSGTGHLIIDREIARQDIKRRVVLRIPSFVGIAYVVERTA 237 Query: 243 LLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 LL +P L D L+ + PLP + ++ N+ + E Sbjct: 238 LLVTIPQRLGELLADEERLRVYPVPFPLPEYAVKQHWHGRYNNDPGNRWLRALIQELL 295 >UniRef50_A8GKS5 Transcriptional regulator, LysR family n=1 Tax=Serratia proteamaculans 568 RepID=A8GKS5_SERP5 Length = 314 Score = 313 bits (803), Expect = 5e-84, Method: Composition-based stats. Identities = 66/300 (22%), Positives = 122/300 (40%), Gaps = 5/300 (1%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 +LK DLNLLV+F+ I++ S+ A + L I+ AVS +L RLR F+DP+F+R + Sbjct: 1 MNLKNVDLNLLVVFDAIFRQRSVGLAGQMLGISQPAVSHALARLRQLFDDPMFVRINNEM 60 Query: 65 APTTTGLNLHHHLEKNLRGL-EQTINI--VNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 PT L +E+ L + + + + + ++ + P + LI L Sbjct: 61 RPTDRASELMPSVERVLSMIRDDVLQPVGFDPAANRRTLTLCMPDIGEQYFLPPLINHLA 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRS-VICMPLHTIRNTLICSNR 180 Q + + ++ EE L + DL I P + R+ L Sbjct: 121 QVAP-GMAVVSHELAPAQLEEALESGRVDLAIGYFPDLRRAVFYQQRLFYSGFCCAVRQG 179 Query: 181 HPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAV 240 HP+I + Q + E + + + + E+ + R + + S L++ IA Sbjct: 180 HPQIGKTLSLPQFLQAEHVTARLRIRSQEIAEQAMREQGIVRNVKLQTSHFLSLTQIIAQ 239 Query: 241 TDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 TDLL V YE + + + P+P + +++ + ++ + F Sbjct: 240 TDLLATVTYEAAQLLQAAGKVHIYPVPFPIPQFPVMQYWHERAHHDRGNQWLRGEIRGLF 299 >UniRef50_Q1XGL2 Transcriptional activator NahR n=3 Tax=root RepID=Q1XGL2_PSEPU Length = 374 Score = 313 bits (803), Expect = 5e-84, Method: Composition-based stats. Identities = 59/281 (20%), Positives = 113/281 (40%), Gaps = 4/281 (1%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 +L+ DLNLLV+F + +S AE+L +T AVS +L+RLR DPLF+R+ +G+ Sbjct: 1 MELRDLDLNLLVVFNQLLVDRRVSITAENLGLTQPAVSNALKRLRTSLQDPLFVRTHQGM 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 PT +L + + L + + ++ F + + L+ L Sbjct: 61 EPTPYAAHLAEPVTSAMHALRNALQHHESFDPLTSERTFTLAMTDIGEIYFMPRLMDVLA 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 + + + S+ + + L + DL + +P + L +C H Sbjct: 121 HQAPNCV-ISTVRDSSMSLMQALQNGTVDLAVGLLPNLQTGFFQRRLLQNHYVCLCRKDH 179 Query: 182 PRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVT 241 P + T E+ + ++I+ G ++ + + R I + + + T Sbjct: 180 PVTREPLTLERFCSYGHVRVIAAGTGHGEVDTYMTRVGIRRDIRLEVPHFAAVGHILQRT 239 Query: 242 DLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKS 282 DLL VP L + + L + LP I + + ++ Sbjct: 240 DLLATVPIRLADCCVEPFGLSALPHPVVLPEIAINMFWHAK 280 >UniRef50_Q39AY8 Transcriptional regulator, LysR family n=1 Tax=Burkholderia sp. 383 RepID=Q39AY8_BURS3 Length = 331 Score = 311 bits (799), Expect = 1e-83, Method: Composition-based stats. Identities = 56/307 (18%), Positives = 122/307 (39%), Gaps = 8/307 (2%) Query: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 M + DL+ DLNLL++F+ +Y+ S ++AA++L++T +VS +L+RLR F+D LF+++ Sbjct: 17 MEHDPDLRNIDLNLLLVFDVLYRTRSTTRAADALHLTQPSVSNALKRLRTLFDDALFVKT 76 Query: 61 GKGIAPTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLI 117 G+ PT + +++ L L + + + + F +Y L L+ Sbjct: 77 ADGMQPTPRADAIAARVDEGLASLRTALQAGRAFDPATSTRTFRLYTSDLGQAIFMPPLV 136 Query: 118 RCLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLIC 177 LR+ + I + A++++ + DL + + L + Sbjct: 137 AHLRRVAP-GIRIVTADPPLDAAQQMMKLGQIDLALGMFTGLHADFHQQRLFHETYVALV 195 Query: 178 SNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDER----FMNRKISFRGSSLLT 233 N HP I T EQ A + + + + R + + + Sbjct: 196 RNDHPMIGATLTAEQFFAADHVSYTPTAGSHAHFEAALYALSPHAGSTRHVVLQLAHSFG 255 Query: 234 IINSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFI 293 + ++ +DL+ +P L +++ + L + +++ + Sbjct: 256 LERIVSSSDLIACIPSRLARELARLQDVRAVSLPFDTAPADIAQFWHERYQRDEGHQWLR 315 Query: 294 DRLNESF 300 + + F Sbjct: 316 TLVYDLF 322 >UniRef50_Q12M05 Transcriptional regulator n=3 Tax=Gammaproteobacteria RepID=Q12M05_SHEDO Length = 309 Score = 311 bits (799), Expect = 1e-83, Method: Composition-based stats. Identities = 67/294 (22%), Positives = 129/294 (43%), Gaps = 4/294 (1%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 + K DLNLLVIF+ I + SIS AAE L +T +VS ++ R+R + DPLFI+ G+GI P Sbjct: 5 MSKLDLNLLVIFDAIMKEQSISAAAEQLAMTQPSVSNAVARMRHNWKDPLFIKQGRGIKP 64 Query: 67 TTTGLNLHHHLEKNLRGLEQTINI--VNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDS 124 + L L + L + ++ N + ++ F I S L R L + + Sbjct: 65 SPFALALWQQVASPLEQIRSAVSSKTFNAAHSERTFRIAITDGTSGLFWPALRRHLERHA 124 Query: 125 SVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRI 184 +I H + + E LLV+ + DLV+ ++ L + + + H Sbjct: 125 P-KINLHAVPYK-LDGEALLVNAEVDLVLDYYENRHPQILSQHLFDNQFVCVMAKAHALS 182 Query: 185 TDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLL 244 T + A E + + ++ + +R+I+ +S + I + L+ Sbjct: 183 EKTLTLDDFAAAEHLLVSLSGDASGTVDRKLAQLGHSRRIAMTVNSFASAKTLIEESRLI 242 Query: 245 GIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 +PY + S++ L L +PS+ + ++++ + ++ + + + Sbjct: 243 STLPYSIIASWQSLDKLTVKTLPFTVPSVPISMAWHSRNDASISLRWLREAIVD 296 >UniRef50_C4UEX0 Lys-R type regulatory protein n=1 Tax=Yersinia ruckeri ATCC 29473 RepID=C4UEX0_YERRU Length = 299 Score = 311 bits (799), Expect = 2e-83, Method: Composition-based stats. Identities = 61/299 (20%), Positives = 119/299 (39%), Gaps = 4/299 (1%) Query: 4 LYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKG 63 + L+ DLNLLVI + + +S+AA+ LY++ AVS +L RLR +D L +R G Sbjct: 1 MNSLRAIDLNLLVILDVLLSERHVSRAAKRLYMSQPAVSHALNRLRYLLDDELLVRVAGG 60 Query: 64 IAPTTTGLNLHHHLEKNLRGLEQTINI--VNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 T L L++ L + I + + F I + L++ LR Sbjct: 61 FQLTRRAAALIEPLKEVLEKVRYIIGTGNFEPALATQRFRIALSDYGAAMVLPGLLQRLR 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 Q + I+ S E E ++ + DL + P + + L + + Sbjct: 121 QQAP-GIDLVVEQASREQMIEQVMAGQLDLALGVFPDLPADMTASRLFEEHFVCVIDQAN 179 Query: 182 PRITDN-STYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAV 240 P T + + + + + V +++ + E + R+++ L ++A Sbjct: 180 PLARKKYFTLDDYLVQPHLLVSMRGESVGEVETALAELGVRRRVAAIMPHFLLAPQALAG 239 Query: 241 TDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNES 299 TDLL V + ++ +NL+ + L +P+ ++ + ++ ES Sbjct: 240 TDLLLTVASRVVTIQQESMNLQRLTLPFTVPNFDFVQIWHNRNHGKEDHRWLRQQVAES 298 >UniRef50_B6R1K2 Transcriptional regulator, LysR family n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R1K2_9RHOB Length = 293 Score = 311 bits (799), Expect = 2e-83, Method: Composition-based stats. Identities = 60/293 (20%), Positives = 119/293 (40%), Gaps = 4/293 (1%) Query: 10 FDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTT 69 DLNLL++FE +Y ++++A++ L +T AVS +L+RLR F DPLFIR+ G+ PT Sbjct: 1 MDLNLLLVFEAVYSERNLTRASKRLNLTQPAVSNALRRLRDTFQDPLFIRTADGMVPTDL 60 Query: 70 GLNLHHHLEKNLRGLEQ--TINIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSVE 127 L + L L + + + L ++F I L++ L + + Sbjct: 61 AEQLAGRVLDALEMLRSFESRESFDPAGLSRDFRISISDYNGMLVLPRLLKELAEQAP-G 119 Query: 128 IECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRITDN 187 + + + E L + DLV+ + ++ PL++ + S + Sbjct: 120 VSITTSQIQRAHVSEHLSTGQVDLVLAPKQDV-ANLSYEPLYSDDYVGVASAHYGPEGGQ 178 Query: 188 STYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLGIV 247 + E+ E + G + + + + RK+ R S + TI + + + + + Sbjct: 179 MSLEEYCQREHLLFSLEGYGRSTVDVALSKLGKKRKVVLRSSHVHTIPHVLEGSAFIATL 238 Query: 248 PYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 P + Y L L L ++ + ++ ++ + E F Sbjct: 239 PRLITLDYLKRFELTSFSLPFELKGHEVGLHWHARQHHDPAHEWLRGLIKELF 291 >UniRef50_Q15UP0 Transcriptional regulator, LysR family n=4 Tax=Alteromonadales RepID=Q15UP0_PSEA6 Length = 305 Score = 311 bits (797), Expect = 3e-83, Method: Composition-based stats. Identities = 68/299 (22%), Positives = 126/299 (42%), Gaps = 9/299 (3%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 +L + DLNL +F+ IY S++KAA+ L IT AVS SL RLR NDPLF+R+G + Sbjct: 1 MNLNRIDLNLFAVFDAIYTAGSLTKAADVLCITQPAVSNSLARLREMLNDPLFVRTGHSM 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 PT N+ + L L +++ + + + ++ L+ S L L+ Sbjct: 61 TPTPAAQNIIGPAREALGLLRKSVQESHTFDPATAEISYNFAARDLLEASIMPRLTAQLQ 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVIT-QMPVISRSVICMPLHTIRNTLICSNR 180 + I + +S N + D + + + R +I Sbjct: 121 NVAP-NITLTNYDISRSNIVSAMASGSLDFYADASSAFVDPHLCKQKIAEDRFVVIARRN 179 Query: 181 HPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAV 240 HP ++ + + + + G I + +D+ + R++ RG LT+ I Sbjct: 180 HPALSQGLNLDTFLQLGHINISQRRTGAGPIDVALDKLNLKRRVVMRGQHFLTVPAVIVK 239 Query: 241 TDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNES 299 TDL+ VPY L Y + +L L ++ ++ ++ S+ ++ +++ E Sbjct: 240 TDLIACVPYHLAKHY----DCSIYELPFELAPVEYFLYWHVSADHDHAHMWLREQIAEV 294 >UniRef50_B4X4B4 LysR substrate binding domain protein n=1 Tax=Alcanivorax sp. DG881 RepID=B4X4B4_9GAMM Length = 304 Score = 310 bits (796), Expect = 3e-83, Method: Composition-based stats. Identities = 68/297 (22%), Positives = 132/297 (44%), Gaps = 6/297 (2%) Query: 6 DLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIA 65 +L+ DLNLL +F+ I + +S+AAESL ++ A+S +LQRLR F D LF+R+ G+ Sbjct: 4 NLRSIDLNLLPVFDAIMEAGQLSRAAESLGMSQPAISAALQRLRHTFGDTLFVRTHHGMT 63 Query: 66 PTTTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCLRQ 122 PT LH L L L T+N + + +++F I L+ LRQ Sbjct: 64 PTPRARELHDQLGPQLVALRDTLNPENRFDPATSQRHFRILSVDYFEMVVLGPLLATLRQ 123 Query: 123 DSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHP 182 + + +I+ + ++ + L +ADL + + L + +I HP Sbjct: 124 QAPHVV--LEIIAADDDMPDELHKGRADLSVDAFVADDDRLQRNVLLEEKLVVIARRSHP 181 Query: 183 RITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTD 242 I + +Q + E L +++ + + ++ R+ R + +++ +D Sbjct: 182 HIKGHCDKQQFLDAEHVVLPNRNRQL-PLDQILNAPGWQRRTGARVTQFASMLAVCGGSD 240 Query: 243 LLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNES 299 L+ VP L Y + + L+ + LP + +Y+ ++ + + +L + Sbjct: 241 LIATVPDRLAQQYAETMQLQVLPFPVALPPVPIYMIWSPTQQRDPAHRWLRQQLEHT 297 >UniRef50_A9GLW1 Transcriptional regulator, LysR family n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GLW1_SORC5 Length = 315 Score = 310 bits (796), Expect = 4e-83, Method: Composition-based stats. Identities = 50/278 (17%), Positives = 110/278 (39%), Gaps = 5/278 (1%) Query: 24 HLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTTGLNLHHHLEKNLRG 83 S+++AA + ++ SA+S +L RLR +DP+ +R+ +G+ PT L + + L Sbjct: 35 EGSVTRAAARVGLSQSAMSHALGRLRVLIDDPVLVRTPRGMIPTPRAQELIGPIREALAK 94 Query: 84 LEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSVEIECHDILMSAENA 140 +E T+ + +++F + + L++ L ++ I+ +E Sbjct: 95 IEATVARSPRFEPATARRSFTVATVDYVELILLPRLVQKLVSEAPF-IDLVARPYDSE-M 152 Query: 141 EELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRITDNSTYEQIMAEEFTQ 200 + K DL I +P + L R + HP + T + + Sbjct: 153 WSAMETGKVDLAIGLLPALPAGFYRQRLIEERYMCVVRRSHPAVRGKLTLKTYTSLPHAL 212 Query: 201 LISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLGIVPYELYNSYRDFLN 260 + + G + + ER ++R+++ + L + +A TDL+ VP + + + Sbjct: 213 ISPRGEGGGRVDEVLAERGLSRRVALQIPHFLVAAHIVAQTDLVLTVPARIARVFAEMEE 272 Query: 261 LKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 L +K L + +++ + + E Sbjct: 273 LHVMKPPVELGGFSVDQVWHERHAKDPAHTWLRGVFAE 310 >UniRef50_A1WRT3 Transcriptional regulator, LysR family n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WRT3_VEREI Length = 315 Score = 309 bits (794), Expect = 5e-83, Method: Composition-based stats. Identities = 67/298 (22%), Positives = 120/298 (40%), Gaps = 3/298 (1%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 DL +F+LNLL F+ IY+H S+S AA+ L +T AV+ +L +LR F++PLF+R+ G+ Sbjct: 1 MDLSEFNLNLLTFFDAIYRHRSVSAAAQELDLTQPAVTAALNKLRVHFDNPLFVRTSNGM 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTINI--VNKSELKKNFIIYGPQLISCSNNSMLIRCLRQ 122 PT L + L + + K F IY + +++ L Q Sbjct: 61 HPTPWADALAPKIAHVLDSVRRLDEPTPFQPQSAKNQFKIYVNDIGMMLALPKIVQLLNQ 120 Query: 123 DSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHP 182 D+ + I + + L + DL I + L HP Sbjct: 121 DAPHT-QLTVIDLRQDEVVNALDVGEIDLAIGYFVGVPNWARQQHLRDTSYVCAMRKDHP 179 Query: 183 RITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTD 242 I D T Q + + + + + +R +R I+ R L I A +D Sbjct: 180 SIGDTMTLTQYLNARHAMYWTHGSTYGRLDEALAKRGFSRDIAVRIPRLGAIPFLAAFSD 239 Query: 243 LLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 + +P +L +RD + +K + + LPS ++ +++ + + + Sbjct: 240 FVVTIPEDLGLLFRDLIPIKLVPVPISLPSFQVKQYWHERLHADSAHKWLRTLILQIM 297 >UniRef50_A4YPA1 Putative transcriptional regulator, LysR family n=1 Tax=Bradyrhizobium sp. ORS278 RepID=A4YPA1_BRASO Length = 310 Score = 309 bits (794), Expect = 5e-83, Method: Composition-based stats. Identities = 65/301 (21%), Positives = 119/301 (39%), Gaps = 6/301 (1%) Query: 1 MANL--YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFI 58 MAN+ DL+ DLNLLV FE + Q S+S+ A+ L I + S +L+RLRA DPLF+ Sbjct: 1 MANIDRADLRDVDLNLLVAFEALMQTRSVSRMAQRLRIGQPSASHALKRLRALLGDPLFV 60 Query: 59 RSGKGIAPTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSM 115 R+ G+ PT L L + L +E+T+ + ++ F I + Sbjct: 61 RTPAGMIPTPHALALAEPIRAILTSIERTLFARASFDPRAERRVFRIGAMDYVQAVIADP 120 Query: 116 LIRCLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTL 175 L+ L+ + + + A L + DL I P I L+ R Sbjct: 121 LLAVLQAQAP-GCKLILTTTDCDTAGRSLARGEIDLAIGAFPQIKAGSHQELLYRERYEC 179 Query: 176 ICSNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTII 235 + + R+ T Q +A + + + R+++ + L I Sbjct: 180 VFDAKACRLGKRVTRAQWLALPHVIMSVHGDYSGPLDDVLKSSGEQREVAVSTPNFLAIP 239 Query: 236 NSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDR 295 + L+ +P + ++ L L L P+ + + ++ + + + D+ Sbjct: 240 FLLRNKRLIAALPSRMARAFCGRLGLSTCPLPFTAPTFDVTMIWHARTGDEPGAAWLRDQ 299 Query: 296 L 296 + Sbjct: 300 I 300 >UniRef50_B0BQD1 HTH-type transcriptional activator n=15 Tax=Proteobacteria RepID=B0BQD1_ACTPJ Length = 299 Score = 309 bits (794), Expect = 6e-83, Method: Composition-based stats. Identities = 57/300 (19%), Positives = 115/300 (38%), Gaps = 7/300 (2%) Query: 4 LYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKG 63 + D++ DLNLL F+ + Q +++KAA+ L +T A+S L RLR F DPLF+R G Sbjct: 1 MRDIRTVDLNLLKAFDALLQERNVTKAAQRLSVTQPAMSAMLNRLRDSFGDPLFVRVQHG 60 Query: 64 IAPTTTGLNLHHHLEKNLRGLEQTINI--VNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 I PT L L ++ L + + + + + I + + + L+ Sbjct: 61 IEPTARALALMPSVKTVLAEVNRMLRPVEFDPQTAEMTIKIASTDYGLEAIGTPFLSHLK 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 Q + +I + + + D+ + I + PL T + H Sbjct: 121 QLAP-KIRVAFLPAQDVDLLAQFEQARIDIALVSTQHIPADLHSKPLLTEHYVCVMRADH 179 Query: 182 PRITDNSTYEQIMAEEFTQLISKSAGVDDI-QMEIDERFMNRKISFRGSSLLTIINSIAV 240 P + +F + + + + R++S + + N + Sbjct: 180 PMANQLLNLDNFCELDFAMMSYDGGQFYGVCDEALAKLGKTRRVSVSVNHFSLLPNILRT 239 Query: 241 TDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 TD++ ++P L + L L + L +++++ + + + + L ES Sbjct: 240 TDVVALIPSRLSHHLT---GLICKTLPLEVQGFSLQMAWHERTHQDPAYQWIRNLLVESL 296 >UniRef50_Q8YZV2 Transcriptional regulator n=2 Tax=Nostocaceae RepID=Q8YZV2_ANASP Length = 305 Score = 309 bits (793), Expect = 8e-83, Method: Composition-based stats. Identities = 69/300 (23%), Positives = 123/300 (41%), Gaps = 5/300 (1%) Query: 2 ANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSG 61 L DL DLNLLV FE +++ S++ AA+ LY+ A+S +L RLR F D LFIR G Sbjct: 1 MGLIDLSSIDLNLLVTFEVLFEERSVTAAAQRLYLGQPAMSAALARLRILFQDELFIRIG 60 Query: 62 KGIAPTTTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIR 118 + + PT L + + L+ + QT+ + + K F I S L+ Sbjct: 61 REMQPTAKALEISPGISVALQQIRQTLESSQTFDPTTSKHTFAIGSSDYTSYVVLPKLLE 120 Query: 119 CLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICS 178 RQ + I+ I ++ +LL R+ + + R MPL +C Sbjct: 121 VCRQVAP-SIDFRLIGFEKDSVGDLLEQREIHVALGLFQNPPRQTRQMPLFEEHFVGLCR 179 Query: 179 NRHPRI-TDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINS 237 HP + ++ T E + + +I + + + R++ LL + Sbjct: 180 RGHPVVTQESMTPETFARLPQALFTLRRDDIGEIDKVLAQYNLQRRVVLTTPHLLILPTV 239 Query: 238 IAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLN 297 I+ +DL+ ++P L + L+ +L + + ++K + + L Sbjct: 240 ISSSDLVTVIPSRLLTPFAYKDTLEIFELPVKTEPWMISMLWSKLTDQDQASIWLRQMLK 299 >UniRef50_Q2IYM8 Transcriptional regulator, LysR family n=2 Tax=Rhodopseudomonas palustris RepID=Q2IYM8_RHOP2 Length = 317 Score = 309 bits (793), Expect = 8e-83, Method: Composition-based stats. Identities = 62/302 (20%), Positives = 133/302 (44%), Gaps = 4/302 (1%) Query: 2 ANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSG 61 +L+ DLNLL++F+ +Y +IS AA L ++ AVS +L RLR F+DPLF+R+G Sbjct: 1 MATINLRNVDLNLLIVFDAVYATGNISHAARQLALSQPAVSNALTRLREHFDDPLFVRAG 60 Query: 62 KGIAPTTTGLNLHHHLEKNLRGLEQTIN---IVNKSELKKNFIIYGPQLISCSNNSMLIR 118 +G+ PT + + + LR + Q + ++ K+ F I + ++R Sbjct: 61 RGVKPTLRSQQMIEPVREALRLIRQQFDGDRSLDLGSYKRTFRIVIVDPLEAMLMPTMLR 120 Query: 119 CLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICS 178 + + ++ N + ++ DL PV + ++ + + ++ Sbjct: 121 EISAHAP-QVTIESRPPWNTNVADAIIAGTLDLACYTFPVSAPGLVFKTICPCDHVIVAR 179 Query: 179 NRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSI 238 HP+I E ++ LI + G +I +I R NR+I++ + + ++ + Sbjct: 180 RGHPKIGATLDAETFLSLAQVALIPELRGHTNIDRDITTRGGNRRIAYMVNKVWSMPGVV 239 Query: 239 AVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 TDL+ ++P L+ + P+ ++ +++ + ++ D + + Sbjct: 240 GSTDLVTVMPRRFAELMAPKFGLQIFESPIPISPQDYHMIWHEKNTDDPGHKWLRDTMVK 299 Query: 299 SF 300 + Sbjct: 300 AM 301 >UniRef50_Q0BPL7 Transcriptional regulators, LysR family n=1 Tax=Granulibacter bethesdensis CGDNIH1 RepID=Q0BPL7_GRABC Length = 308 Score = 308 bits (790), Expect = 2e-82, Method: Composition-based stats. Identities = 52/298 (17%), Positives = 101/298 (33%), Gaps = 4/298 (1%) Query: 6 DLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIA 65 +L + DLNLL F+ IY S++KAAE + + SA+S +L RLR D LF+R+ G+ Sbjct: 7 NLSRLDLNLLTAFDAIYTERSVTKAAECIGVGQSAMSHNLARLREALQDELFVRTPSGME 66 Query: 66 PTTTGLNLHHHLEKNLRGLEQ---TINIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQ 122 PT + + L ++ T + ++ + I I L+ + + Sbjct: 67 PTPRARAIADTVRNLLWTVQDKLLTTRSFTPATAERIWRIGLADNIESLLMPPLLDMMLK 126 Query: 123 DSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHP 182 ++ + I E L + D+ I + + Sbjct: 127 EAP-GMRIQAIFTDGLRVLEALDRDELDMGIGVFRHGGNVHKRRNFAPDSYLCLYDPKQI 185 Query: 183 RITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTD 242 + T +Q + + + + R I L++ + Sbjct: 186 TLEGPITLDQYASLPHVLVSLRGIFHGVADDALSLLGRTRTIVMTTPHFLSVPYVLRGAP 245 Query: 243 LLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 ++ +P L S L L L +L + ++ S N+ + + Sbjct: 246 VITTLPGTLARSAASAHGLCVSPLPFELAPFRLSMLWHSSYDNDPAHRWLRNTVASLM 303 >UniRef50_A6EYC4 LysR family regulatory protein n=1 Tax=Marinobacter algicola DG893 RepID=A6EYC4_9ALTE Length = 300 Score = 308 bits (789), Expect = 2e-82, Method: Composition-based stats. Identities = 67/297 (22%), Positives = 132/297 (44%), Gaps = 6/297 (2%) Query: 6 DLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIA 65 +L+ DLNLL +F+ I + +S+AA+SL ++ A+S +LQRLR DPLF+R+ +G+ Sbjct: 4 NLRSVDLNLLPVFDAIMEAGQLSRAADSLGMSQPAISAALQRLRHTLGDPLFVRTHQGMV 63 Query: 66 PTTTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCLRQ 122 PT LH L + L + T++ ++ F + L+ LR Sbjct: 64 PTPRARELHRSLSQQLGAMRDTLDPANRFVPGTSQRRFRVLSNDYFEMVVLPTLLTRLRS 123 Query: 123 DSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHP 182 ++ + ++ ++ ++ + L +ADL + + + L R ++ HP Sbjct: 124 EAPNVV--VEVALAGDDMPQRLYTAEADLAVDAFATENDRLRRQVLLAERLAVVARKDHP 181 Query: 183 RITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTD 242 + D+ + +Q + E L + ++E R+ R + +++ + + +D Sbjct: 182 DLWDDCSKQQFLDAEHVVL-PDRNRRLPLDQILNEPGWQRRTGARVTQFASMLATCSRSD 240 Query: 243 LLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNES 299 ++ VP L Y LK + +P + +Y+ + N+ F RL ES Sbjct: 241 MIATVPERLAQQYARAFGLKTLPFPVEVPPLPVYLLWAPVMDNDPAHIWFRQRLMES 297 >UniRef50_D0LKM3 Transcriptional regulator, LysR family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LKM3_HALO1 Length = 307 Score = 308 bits (789), Expect = 2e-82, Method: Composition-based stats. Identities = 58/295 (19%), Positives = 110/295 (37%), Gaps = 5/295 (1%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 L + +LNLLV + + S+S+AA ++ A+SQSL++LRA F+D L R + Sbjct: 6 LSEINLNLLVSLDALLTERSVSRAARRTGVSQPAMSQSLRQLRAIFDDALLARDRGVLVL 65 Query: 67 TTTGLNLHHHLEKNLRGLEQTIN---IVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQD 123 T L L L +++ ++ + ++ F I + + L+ ++ Sbjct: 66 TPAAERLMVPLRHALVAVQRVLDGEKPFDPGRAERRFTIAVGDFAAVTLLPPLLERASRE 125 Query: 124 SSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHP- 182 + I E L + DLVI S + L+ + HP Sbjct: 126 AP-GIGFDVRPAEPTRLFERLATGEFDLVIGAKLDASGDFMRQLLYRDGFVCMARRDHPE 184 Query: 183 RITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTD 242 D E+ A + G + + ER R+I+ R L + +D Sbjct: 185 LSGDALDLERYAALPHVLISPTGEGPSVVDRLLAERGKQRRIALRIPYFLAAPLMVVRSD 244 Query: 243 LLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLN 297 L+ P + ++ L + LPS +Y +++ ++ + + Sbjct: 245 LVLTAPRSVAGAFASTHALALFEPPLELPSFGVYQLWHQRYQSDDAHRWLRELVA 299 >UniRef50_C9NXV6 Transcriptional regulator LysR family n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NXV6_9VIBR Length = 303 Score = 307 bits (788), Expect = 3e-82, Method: Composition-based stats. Identities = 45/298 (15%), Positives = 112/298 (37%), Gaps = 4/298 (1%) Query: 4 LYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKG 63 + ++ +L+ L + + I++ ++++A E +T SAVS +L++LR FND L IR G Sbjct: 1 MSNISDIELSQLRLLQIIFETKNLTQAGERAGLTQSAVSHTLKKLRHSFNDSLVIRQGNK 60 Query: 64 IAPTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCL 120 + T +L L + L E+ I + + + F I L+ L R Sbjct: 61 MVLTPRAESLQTSLGRWLNDFERNILFQEVFDPLTSDRTFYIATSDLVEHILAPHLSRHF 120 Query: 121 RQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNR 180 + + I + + + D I+ + +++ L+ + Sbjct: 121 GRIAP-NIRIVFRKIEKRALASQIESGEVDFAISVIDSTHPNLMVRTLYRDDFVSVVRAG 179 Query: 181 HPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAV 240 HP + + + + + ++ ++R + ++ ++ + + Sbjct: 180 HPLLNSKIKAKDFCQYPHVLASTGNDNRGMVDDALEGLGLSRVMQYKVANFSSAPYIVES 239 Query: 241 TDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 +D + P + N+ L S + + ++ + ++ F +++ E Sbjct: 240 SDAILTAPRTFVDLIAGKFNVSSFTPPVELESYAMKMYWHIKNKDDQANRWFREQIAE 297 >UniRef50_A1U2R6 Transcriptional regulator, LysR family n=3 Tax=Marinobacter RepID=A1U2R6_MARAV Length = 300 Score = 307 bits (787), Expect = 4e-82, Method: Composition-based stats. Identities = 66/298 (22%), Positives = 119/298 (39%), Gaps = 5/298 (1%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 L + DLNLL +F+ IY+ S+++AA++L++T A+S SL RLR FNDPLF R G + Sbjct: 1 MALNRPDLNLLHVFDTIYREGSLTRAAKALHLTQPAISHSLARLRDHFNDPLFTRQGNQM 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTIN---IVNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 PT + L ++ +N + + +K + + ++ + LI L Sbjct: 61 VPTPLARRFLESMRPGLNQIQSAVNQFHAFDPASQRKTYALGLRDVLESTFLPQLISKL- 119 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 ++E ++ + E L K D I + +S L R ++ H Sbjct: 120 -APYPDMEVQSQRVARRDMETQLAAGKLDFAIDVLLPVSNQTSHELLRQDRLVVLARKGH 178 Query: 182 PRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVT 241 P I + + S++ G E+ R I R + + Sbjct: 179 PVIAQGLDMASYLEARHILVSSRAEGPGIEDFELSRHGAQRTIRLRCQHYYAACRVVESS 238 Query: 242 DLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNES 299 DLL +P +++ + +PSI +++ ++K+ F D L Sbjct: 239 DLLLTMPETYARIIAQNTDIEVLAPPVEMPSIDVHLYWHKAYEQEPALVWFRDLLRNL 296 >UniRef50_B8KV86 Putative transcriptional regulator, LysR family n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KV86_9GAMM Length = 302 Score = 306 bits (786), Expect = 4e-82, Method: Composition-based stats. Identities = 61/295 (20%), Positives = 117/295 (39%), Gaps = 4/295 (1%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 +L+ DLNLL IF+ I +++ AA+ + ++ A+S +L RLR +D LF+ +G+G+ Sbjct: 1 MNLRSVDLNLLTIFDAIVSEGNLTHAADKIGMSQPAISAALGRLRVTLDDELFVSTGRGV 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTIN---IVNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 PT L L + + L + + + + F I L+R L+ Sbjct: 61 KPTQRALQLQEPVRRILEDVRAALTSTGEFDPESSDRVFTISSIDYGGIVVIPRLLRYLQ 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 + S I + A + DL IT P++S C L + H Sbjct: 121 KQQSP-IIVNINPSQTGEAHRDVDRSSGDLTITSDPLLSPDHECKLLRRELPYCLARKDH 179 Query: 182 PRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVT 241 P IT + + EQ L S + + + + NR+ R S + + T Sbjct: 180 PDITGSLSVEQFQRNRHVLLYSNNTRGLALDAHLLQLGFNRECGARVPSFFNMPYIVGNT 239 Query: 242 DLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRL 296 D++ +P ++ + L+ + + ++ +++S + D + Sbjct: 240 DMICTMPRQMAEDFARQFGLQVLAAPFDNWTASYFMVWHRSFNGDSGHCWLRDSI 294 >UniRef50_Q12H69 Transcriptional regulator, LysR family n=14 Tax=Burkholderiales RepID=Q12H69_POLSJ Length = 342 Score = 306 bits (786), Expect = 5e-82, Method: Composition-based stats. Identities = 56/311 (18%), Positives = 117/311 (37%), Gaps = 15/311 (4%) Query: 3 NLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGK 62 N + + DLNLL +F+ + S+++AA +L +T AVS +L+RLR D L RSG+ Sbjct: 26 NPTNFRTLDLNLLRVFDEVMAERSLTRAARNLSLTQPAVSNALRRLRETLGDELVQRSGQ 85 Query: 63 GIAPTTTGLNLHHHLEKNLRGLEQTI--NIVNKSELKKNFIIYGPQLISCSNNSMLIRCL 120 G+APT + + + L+ L++++ + + F++ + LI L Sbjct: 86 GMAPTPRARAIWPAVREALQRLQESLIPDEFVPGQATTTFVLAMADATAAELIPGLIETL 145 Query: 121 RQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRS------------VICMPL 168 Q++ + I ++ + LL + DL + P + L Sbjct: 146 EQEAP-GVSMRVIPLTTRDPRRLLDEQACDLAVGYFPSVLADLTAHAQSGEPMPFQHRRL 204 Query: 169 HTIRNTLICSNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRG 228 + + HP + T ++ A + I + R++ Sbjct: 205 YDGEYVCVMRKGHPLASGPLTLDRFCAARHMLVSFSGRPYGFIDESLASLGRERQVVLTV 264 Query: 229 SSLLTIINSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLV 288 + T +A ++LL ++P L L + ++ + +++ S Sbjct: 265 NQFFTAGRVVANSNLLTVLPRHFVRVTGIAEQLVLRPLPFDVSAVHVDAVWHRRSQQRGA 324 Query: 289 FSRFIDRLNES 299 + + + Sbjct: 325 HVWLREAVLRA 335 >UniRef50_B7WQP0 Transcriptional regulator, LysR family n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WQP0_COMTE Length = 295 Score = 306 bits (786), Expect = 5e-82, Method: Composition-based stats. Identities = 68/294 (23%), Positives = 123/294 (41%), Gaps = 5/294 (1%) Query: 10 FDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTT 69 D+ LL +F+ IY+ S+S+A E+L + ++VS +L RLR FND LF+R+ +G+ PT Sbjct: 1 MDMKLLSVFDEIYKTRSVSRAGENLGLAQTSVSLALGRLRRAFNDQLFVRTSEGMLPTPR 60 Query: 70 GLNLHHHLEKNLRGLEQTIN---IVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSV 126 L L + L L+ + + + F + + L+ L + Sbjct: 61 AAALVPQLRQALELLQSATRQQAEFDPASSSRAFRLAMTDISHLEFLPALMNKLGNIAP- 119 Query: 127 EIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRITD 186 ++ + + + LL ADL I MP + L + HPRI D Sbjct: 120 KVRVEVLRI-TADTARLLEAGDADLAIGYMPELDAGFYQQKLFRDGFACVVRRTHPRIDD 178 Query: 187 NSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLGI 246 N T + E + + G + ++ E+ + R ++ +L + N +A TDL+ Sbjct: 179 NLTMTRFKTERHVIITAPGTGNEIVEQELKRQGAQRNVALSLPTLPGVGNLLAHTDLIAT 238 Query: 247 VPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 VP+ + + +K I + LP + +++ + L E F Sbjct: 239 VPHRIAQTLVKIAQVKAIASPYRLPEFAIKQHWHERYQQDPANRWLRSTLAELF 292 >UniRef50_Q0ARX0 Transcriptional regulator, LysR family n=1 Tax=Maricaulis maris MCS10 RepID=Q0ARX0_MARMM Length = 334 Score = 306 bits (786), Expect = 5e-82, Method: Composition-based stats. Identities = 53/300 (17%), Positives = 117/300 (39%), Gaps = 4/300 (1%) Query: 2 ANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSG 61 +L LK DLNLL+ F+ ++ ++++AA L ++ VS +L RLR F D LF+R+ Sbjct: 1 MSLMSLKHVDLNLLITFDALWHERNVTRAARRLNVSQPTVSNALSRLRLAFGDQLFLRAP 60 Query: 62 KGIAPTTTGLNLHHHLEKNLRGLEQTIN---IVNKSELKKNFIIYGPQLISCSNNSMLIR 118 +GI PT + + + LR +EQ ++ + + ++ F I L+ Sbjct: 61 RGIEPTERCSEIIKDVREALRHIEQALDSGPAFDAKQCRREFHIGCADYFDLFVLPDLLA 120 Query: 119 CLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICS 178 + + + + I+ + E +LL + D ++ ++ P+ R+ Sbjct: 121 YMAEHAPM-IDLRLRSVDIEEGMDLLDAGELDFMMHMEFPAAKRFGVRPVLHERHVFATR 179 Query: 179 NRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSI 238 HP + + + + + + R+++ + T+ + + Sbjct: 180 AGHPLVREAPDIATFASLSHVNFSQRGDSESPVDEVLARLGYRRRVAITTQHMTTVAHLV 239 Query: 239 AVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 TDL+ VP + + + + + + +N+ + D + E Sbjct: 240 KTTDLVASVPSRMAARMVEEGGFAVYPIPFQIEKAPVAVYWNRRFELDGAMRWMRDAIIE 299 >UniRef50_A6VUW1 Transcriptional regulator, LysR family n=2 Tax=Marinomonas RepID=A6VUW1_MARMS Length = 321 Score = 306 bits (785), Expect = 6e-82, Method: Composition-based stats. Identities = 69/298 (23%), Positives = 121/298 (40%), Gaps = 6/298 (2%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 L DLNLL +F+ + + L+++KAA L ++ AVS+SL RLR FNDPLFIR+ G++ Sbjct: 21 LSDIDLNLLYVFQVLIEELNVTKAATRLNVSQPAVSRSLSRLRDVFNDPLFIRTSHGLSA 80 Query: 67 TTTGLNLHHHLEKNLRGLEQTINI--VNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDS 124 T +L L L+GLE I K+ FI+ + + ++ RQ + Sbjct: 81 TAKTQDLAPLLADTLKGLESLIQPSEFTPQSSKRRFILSTTDFGTLTVLPKILDKFRQKA 140 Query: 125 SVEIECHDILMSAENAEELLVHRKADLVITQM-PVISRSVICMPLHTIRNTLICSNRHPR 183 I D+ E+ L D+ + + + M L + R + HPR Sbjct: 141 PDAI--LDVKSWNEDMVAELDQTNIDVAVAVLSKEPPAGIRAMRLKSDRMVCLARKNHPR 198 Query: 184 ITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDL 243 I T E + Q++ + E+++ R +S + + + +DL Sbjct: 199 IEGKLTLESYLQVSHVQVVLGRREYFAVDRELEKMGHKRHVSVHLPNFVPAARVVMDSDL 258 Query: 244 LGIVPYELYNSYRDF-LNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 L VP + +L + +++ ++ F L ++F Sbjct: 259 LLTVPKLFAEDMAATVSEIVVHELPFASREFDYSMIWHERFQHDAAHVWFRGLLRQAF 316 >UniRef50_A6EW06 Transcriptional regulator n=2 Tax=Marinobacter RepID=A6EW06_9ALTE Length = 315 Score = 306 bits (785), Expect = 7e-82, Method: Composition-based stats. Identities = 59/296 (19%), Positives = 120/296 (40%), Gaps = 3/296 (1%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 +K +L LL IF+ I S+++AA+ L +T AVS ++ R+R +NDPLF+R G+ I P Sbjct: 1 MKTQELQLLYIFDAIMTERSVTRAADRLAMTQPAVSNAISRMRQIWNDPLFVRKGRNIEP 60 Query: 67 TTTGLNLHHHLEKNLRGLEQTINI--VNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDS 124 T+ L+L + + L ++ + + ++ F I +I LI L +++ Sbjct: 61 TSYALSLWDQVGDPMFALTNAVSATQFDPASARRTFRIAVTDVIVEMIWRQLIDLLEREA 120 Query: 125 SVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRI 184 ++ H + + E + + L DL I + S+ L L HP Sbjct: 121 P-GVDVHAVPYTPEGSYDDLRSAHVDLAIGVLNQHDYSLRSTWLLDSGFVLAMRADHPLA 179 Query: 185 TDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLL 244 T E+ + + + +D++ +R+I+ + ++ + ++L+ Sbjct: 180 GRQITMEEFLEARHLLVTMSGDAHGSVDSYLDQKGQSRRIAATMNHFASVPQVLRESNLI 239 Query: 245 GIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 VP + L +L + LY+ ++ + + Sbjct: 240 AAVPELISQDCGFVDGLWMGELPFDVDPTSLYLIWHARHDREPGIIWIRNHIERLL 295 >UniRef50_Q13QG3 Transcriptional regulator, LysR family n=9 Tax=Proteobacteria RepID=Q13QG3_BURXL Length = 316 Score = 306 bits (784), Expect = 7e-82, Method: Composition-based stats. Identities = 62/293 (21%), Positives = 119/293 (40%), Gaps = 4/293 (1%) Query: 11 DLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTTG 70 DLNLL +F I S++ A E L +T AVS +L+RLRA F+DPLF+R+ G+ PT Sbjct: 10 DLNLLRVFLAISDLRSLTAAGERLGLTQPAVSHALRRLRALFDDPLFVRTPTGMVPTDAA 69 Query: 71 LNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSVE 127 L LH L + + + + + ++ F + + L+ L + + Sbjct: 70 LRLHAPLTQAFGIINVAVQQIARFDPATAQRVFRVSMSDMSEFYFLPPLLSMLDRSA-RG 128 Query: 128 IECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRITDN 187 I +S ++ + + DL + +P + + L + + HP Sbjct: 129 IRLEIANVSVDSVSSAMRSGEIDLALGYVPGLDTGCVSKTLFVDEHVCVVRAGHPLRKQK 188 Query: 188 STYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLGIV 247 T E + + + + G ++ ++E + R I R + + TDL I Sbjct: 189 PTKEDLANLRYVYASTNATGHRMVEQWLEELNLRRDIVLRLPHFVVAPEIVQHTDLAMIF 248 Query: 248 PYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 P + + + + L LP I++ + + + + +D + + F Sbjct: 249 PRSIAQRFNRNKAFRILPLPFALPPIEIQVHSHSQFSADPGIAWLLDAIYDMF 301 >UniRef50_B2JSH4 Transcriptional regulator, LysR family n=2 Tax=Burkholderiaceae RepID=B2JSH4_BURP8 Length = 309 Score = 306 bits (784), Expect = 9e-82, Method: Composition-based stats. Identities = 57/304 (18%), Positives = 125/304 (41%), Gaps = 5/304 (1%) Query: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 + ++ + FDLNLL IF+ +++H + KAAE L ++ A S +L+RLR + D LF+++ Sbjct: 2 LPSICHMDNFDLNLLRIFDALWRHGHLGKAAEELTLSQPAASYALKRLREELGDVLFVKT 61 Query: 61 GKGIAPTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLI 117 G G+ PT + L ++ L + + + + ++ F I + + L+ Sbjct: 62 GSGMQPTPRAILLAPVVQSVLADIRERVLKAPNFVPDKAQRTFTIALSDVGEMVSLPRLL 121 Query: 118 RCLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISR-SVICMPLHTIRNTLI 176 + + + + + + + L + DL I P + V L + Sbjct: 122 QRVTSLAP-SVNVTTVSFAPKQLLSSLQRSEVDLAIGYFPDLDGVDVFQQHLVRHSFVCL 180 Query: 177 CSNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIIN 236 HP + T + + + + ++ + E + R+ L+I Sbjct: 181 VRQNHPAVQGRLTKKLFCELPHAVVQVEGRRQEIVEQFLKENGIRRREVLHTPHFLSIPM 240 Query: 237 SIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRL 296 +IA+TDL+ V ++ + L+ + + +P + +++S ++ + Sbjct: 241 TIAMTDLVVTVSSDVGEIFARIAELEILDPPYKMPRFDVNQYWHRSQHDDPGNRWMRGLV 300 Query: 297 NESF 300 E F Sbjct: 301 RELF 304 >UniRef50_A0LD87 Transcriptional regulator, LysR family n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LD87_MAGSM Length = 322 Score = 305 bits (783), Expect = 1e-81, Method: Composition-based stats. Identities = 58/296 (19%), Positives = 125/296 (42%), Gaps = 4/296 (1%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 ++L KFDLNLLV F+ + +++A +L IT +A+S +L+RLR F+DPLF+++G + Sbjct: 8 HNLNKFDLNLLVAFDTLMTERGVTRAGRALGITQAAMSNTLRRLRELFDDPLFVKTGSSM 67 Query: 65 APTTTGLNLHHHLEKNLRGLEQTINI--VNKSELKKNFIIYGPQLISCSNNSMLIRCLRQ 122 PT + L + L + + +N + +NF + S L+R + Q Sbjct: 68 EPTPRAIELSTPVALALEEVRKALNQEGFDPMMASENFRLGMIDYASAMLMPGLVRHMSQ 127 Query: 123 DSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHP 182 + + + + + L DLV ++ + V L ++ + HP Sbjct: 128 VAP-RAKMQVVDVGGDEEVANLERGAVDLVFSRFQWVPPKVCINRLFSMEYVAVFCPNHP 186 Query: 183 RI-TDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVT 241 + + + + +A + + + E R I + +S + +A + Sbjct: 187 GVEGGSLSMDAFLASRHVHYYPRGMDNTVVDETLAEMGEKRNIIGKLASFGMLPAMLASS 246 Query: 242 DLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLN 297 ++ ++P L L+ KL P +++ ++++ + + F ++ Sbjct: 247 HVMAVMPEGAAKVVARPLGLRVEKLPFKTPLLRMALAWHPRTDRDPSHVWFRQQVK 302 >UniRef50_A1U1I0 Transcriptional regulator, LysR family n=67 Tax=Proteobacteria RepID=A1U1I0_MARAV Length = 336 Score = 305 bits (782), Expect = 1e-81, Method: Composition-based stats. Identities = 61/307 (19%), Positives = 118/307 (38%), Gaps = 17/307 (5%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 D+ + DLNLLV + + + +++KAA L IT A+S L+RLR F DPL +R+ +G+ Sbjct: 1 MDISRVDLNLLVYLDVLLRERNVTKAANHLGITQPAMSNGLRRLRDLFGDPLLVRTSEGM 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTIN---IVNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 T L + L +EQ + E ++ F I ++R +R Sbjct: 61 TATERARELQPLVRGILSDIEQAVQEKTPFAAGESQRVFRIMASDYAESCLMPRVLRRIR 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 Q++ + D+L ++ + + + D+ I + I +S L T + + R+ Sbjct: 121 QEAP-HVTL-DVLTPSDVSFLDVEQGRLDMAINRFDKIPQSFHQKTLWTEYFACLMNARN 178 Query: 182 PRITDNSTYEQIMAEEFTQLISKSAGVDD------------IQMEIDERFMNRKISFRGS 229 P + + T + + + GV + + R+IS Sbjct: 179 PILKEPFTLDTYLDASHIWVSKTGFGVGVGVNPKDVQRLGWVDEALGRMGRKRQISVFTR 238 Query: 230 SLLTIINSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVF 289 + DL+ +P +D NL +P +L ++++ +N Sbjct: 239 HYQVAMLLAEQHDLIATLPSRAAWLQKDNPNLVVKVPPFEIPPFELKMAWSPLLQHNSDH 298 Query: 290 SRFIDRL 296 + Sbjct: 299 QWLRKLI 305 >UniRef50_Q1GMN1 Transcriptional regulator, LysR family n=1 Tax=Ruegeria sp. TM1040 RepID=Q1GMN1_SILST Length = 319 Score = 304 bits (781), Expect = 2e-81, Method: Composition-based stats. Identities = 65/305 (21%), Positives = 123/305 (40%), Gaps = 7/305 (2%) Query: 2 ANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSG 61 + +L DLNLL +F + S++KAA S+ ++ AVS +L+RLR +D LFIRS Sbjct: 7 MHQKNLNAIDLNLLKVFSALAAERSVTKAANSVGLSQPAVSHALRRLRDLMDDELFIRST 66 Query: 62 KGIAPTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIR 118 G+ PT L ++ +L+ L+ + + + + L+ + + L S L Sbjct: 67 DGMQPTERCRELAPAIDASLKMLQDAMTVKDDNDPANLRATYRLGMNDLFSTLLVPGLTA 126 Query: 119 CLR-QDSSVEIECHD---ILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNT 174 + Q +V + I + ++A L + DL + Q L Sbjct: 127 RVAKQAPNVSLRFLHSMAINQNVDDAYSDLERGRIDLTVIQDFDTPSRFDRELLGASEFV 186 Query: 175 LICSNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTI 234 + HP + EQ + + A I + + + R+I R Sbjct: 187 CVARAGHPVFQPGLSMEQYTSLGHIMFTTLDAEYSRIDEALSKMGIRRRIELRVPHYSAA 246 Query: 235 INSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFID 294 +++ A+TDL+ VP L L+ +L P K++ ++K+ + + Sbjct: 247 LSATALTDLVYTVPRILAQHAEQAFGLQVSELPFEAPVRKIFQVWHKTRTKDFGHQWLRN 306 Query: 295 RLNES 299 +++ Sbjct: 307 VVSDV 311 >UniRef50_D1TCI7 LysR family transcriptional regulator n=2 Tax=Burkholderia RepID=D1TCI7_9BURK Length = 329 Score = 304 bits (780), Expect = 3e-81, Method: Composition-based stats. Identities = 64/306 (20%), Positives = 130/306 (42%), Gaps = 7/306 (2%) Query: 1 MANLY--DLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFI 58 MAN+ D ++FDLNLLV F + + S+++AA+ L + AVS +L+RLR F D LF+ Sbjct: 14 MANIIENDFRRFDLNLLVTFRALLEERSVTRAAQRLLLGQPAVSGALKRLRETFGDELFV 73 Query: 59 RSGKGIAPTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSM 115 R+ +G+ PT L L +E L+ L Q + ++ + + ++ F I + Sbjct: 74 RTPQGMTPTPRALELARQIEPFLQSLHQALTQPSVFDPASAQRVFRIGLSDSLELLLMPE 133 Query: 116 LIRCLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTL 175 ++ L + ++ + A +L +L + MPL + R Sbjct: 134 IMARLAAAAP-GVKLIARSTDSTRAAAMLDDGAIELAVGVFRECVPWQRLMPLFSWRFVS 192 Query: 176 ICSNRHPRI-TDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTI 234 + + + R + + ++ + + I ++ + +NR++ F S+ T Sbjct: 193 VYNPQLVRTRRKHLSMDEFLRHRHVLTSFSAELRGFIDERLELQGLNREVVFSSSNFATS 252 Query: 235 INSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFID 294 + T + VP + +RD L L L +P ++ + + + + + Sbjct: 253 PFIVQRTAAIATVPEFIGRVWRDTLGLALSPLPFEVPGYEVSLMWAAAHDQDPALAWLKR 312 Query: 295 RLNESF 300 ++F Sbjct: 313 EFADAF 318 >UniRef50_Q5LKP3 Transcriptional regulator, LysR family n=1 Tax=Ruegeria pomeroyi RepID=Q5LKP3_SILPO Length = 324 Score = 304 bits (779), Expect = 3e-81, Method: Composition-based stats. Identities = 71/299 (23%), Positives = 129/299 (43%), Gaps = 5/299 (1%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 DL+K DLNLLV FE IY +IS AA+ L ++ +S +L RLR DPLFIRSG+G+ Sbjct: 1 MDLRKLDLNLLVTFEAIYTAGNISHAAKRLNVSQPTISNALARLRDTVGDPLFIRSGRGV 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 APT + + L+ ++ + S ++NF I ++ L+R ++ Sbjct: 61 APTPRATGMIGPVRDALQMIQSGFGDDERFDPSTTRRNFRIVVLDMLEPILMPPLVRAVQ 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 SV +E ++ E L DL +T + C + + ++ H Sbjct: 121 DYRSVTLEMLPVMDFP--IAEGLNDGSLDLALTTFDPQHGDIECEQVGAAKIVIVARKGH 178 Query: 182 PRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVT 241 PRI T + LI K + + + ++R I + + + + +A + Sbjct: 179 PRIKGEMTPALVSEIGHVALIPKIRALSRVDEVLRYAKIDRHIVYMVTRFWSFPHILANS 238 Query: 242 DLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 DL+ ++P + F L + P +Y+ + K + + +++ E++ Sbjct: 239 DLIAMMPGDFAAHAALFYPLDIFPVPFEFPEQHIYMIWKKRHGLDPGHTWLREKIVEAY 297 >UniRef50_A9FW21 Transcriptional regulator, LysR family n=2 Tax=Myxococcales RepID=A9FW21_SORC5 Length = 333 Score = 304 bits (779), Expect = 3e-81, Method: Composition-based stats. Identities = 57/299 (19%), Positives = 114/299 (38%), Gaps = 7/299 (2%) Query: 2 ANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSG 61 + D++ +LNLL E + S+S AA +++ SA+S SL RLR F DPL + G Sbjct: 17 MSEIDIRSINLNLLPALEALLVEGSVSGAARRAHVSQSAMSHSLARLRELFGDPLLVPLG 76 Query: 62 KGIAPTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIR 118 +G+ PT L L L L + + + + F + + ++ Sbjct: 77 RGLTPTPRALQLRAALPAAFEHLRRALASPEPFDPRTSARTFRVATIDYFELTTLPDVLD 136 Query: 119 CLRQDSSVEIECHDILMSAENAEELLVHRKADLVI--TQMPVISRSVICMPLHTIRNTLI 176 L + + + S + LV DL + PV + + PL+ ++ Sbjct: 137 HLGEHAPF-VRLEIERFSP-DVTPALVLGDIDLALFGASQPVPAAGLRRAPLYQDPFAVM 194 Query: 177 CSNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIIN 236 HP I + +A + + + + R+++ R ++ Sbjct: 195 ARKGHPAIKRRLDLDTYVALGHVLVSVEGHRGGAVDRALARLGKTRRVALRLPHFMSAPL 254 Query: 237 SIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDR 295 ++ +DLL +P + R+ L+ LP+ ++ +++ ++ F D Sbjct: 255 AVRSSDLLCTIPSSVAQRARELFGLRVFAPPFELPAAQVVAVWSQRHDDDPAQRWFRDL 313 >UniRef50_Q1LD16 Transcriptional regulator, LysR family n=8 Tax=Proteobacteria RepID=Q1LD16_RALME Length = 315 Score = 303 bits (778), Expect = 4e-81, Method: Composition-based stats. Identities = 58/303 (19%), Positives = 113/303 (37%), Gaps = 8/303 (2%) Query: 3 NLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIR--S 60 ++ D K DLNLLV + + +++ AE L +T AVS L RLR F+DPL I + Sbjct: 8 SVVDFKGVDLNLLVTLDALLDERNVTHTAERLGLTQPAVSAQLARLRRIFDDPLLIPADT 67 Query: 61 GKGIAPTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLI 117 G+G+ + L L L L+ LE + + + F+I + + L+ Sbjct: 68 GRGMIASARALALLEPLHVALKDLESVVHRRPEFDPFVDTRQFVIAASDNATSTLGMSLL 127 Query: 118 RCLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLIC 177 L + + + L + DL+I ++ ++ L + Sbjct: 128 ERLSIVAGTGVRVAFVHGRQAEIAAQLESGEVDLLIGSERMVPPTMRARKLLDETFVMAQ 187 Query: 178 SNRHPRITDNSTYEQIMAEEFTQLI-SKSAGVDDIQMEIDERFMNRKISFRGSSLLTIIN 236 HPR T + + S + + ++ +R ++ + + + Sbjct: 188 RKSHPRGARRLTLDMYCKLRHVLVSTSGGSFFGFVDEQLQLLGRSRDVAVSVQAFTVVPD 247 Query: 237 SIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRL 296 + +D + +P L Y D+ L L +P L +++ + + + L Sbjct: 248 LLRRSDYVCTMPARLAARYADW--LDAFALPFDVPGFSLSAAWHPRNHADPAIAWLRSTL 305 Query: 297 NES 299 E Sbjct: 306 AEV 308 >UniRef50_Q13JD9 Transcriptional regulator, LysR family n=1 Tax=Burkholderia xenovorans LB400 RepID=Q13JD9_BURXL Length = 305 Score = 303 bits (778), Expect = 4e-81, Method: Composition-based stats. Identities = 63/303 (20%), Positives = 128/303 (42%), Gaps = 5/303 (1%) Query: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 M DLNL+ F IY+ S+S AA L +T VS +L RLR +DPLF R+ Sbjct: 2 MPGTMQTASTDLNLIRAFVAIYETGSVSAAARRLNLTQPTVSYALSRLRTLLHDPLFSRT 61 Query: 61 GKGIAPTTTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLI 117 +G+APT L+ + L +E I + + + F I L ++ Sbjct: 62 REGMAPTFNASQLYETFRQALDRIEGAIAATRYFDAATSTRCFRIALSDLGELYFLPRMV 121 Query: 118 RCLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLIC 177 L++ + +E + + E E L + D + + ++ L + + + Sbjct: 122 ERLQRTAP-GVELEVVQLDVERTAEWLNTGQIDAAVGNLHLVGGKARRRYLFSETYSCLV 180 Query: 178 SNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINS 237 S+RHP I + + + + + S+G ++ + ++RKI+ R +++ Sbjct: 181 SHRHPWIGTTLSLGDYVRAKHV-VGASSSGHRLVEDVMTGMGLSRKIALRVPHFTNVVDV 239 Query: 238 IAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLN 297 +A +DL+ +P + N Y+ ++ + L P+ + + + + + + + Sbjct: 240 VAGSDLVLTLPARVANVYQSTGTVRALPLPVPVDPFDVNLYWQDRATDLSAQKWLCEIIA 299 Query: 298 ESF 300 E+ Sbjct: 300 ETL 302 >UniRef50_Q13YH7 Transcriptional regulator, LysR family n=12 Tax=cellular organisms RepID=Q13YH7_BURXL Length = 317 Score = 303 bits (777), Expect = 6e-81, Method: Composition-based stats. Identities = 60/300 (20%), Positives = 120/300 (40%), Gaps = 7/300 (2%) Query: 4 LYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKG 63 + L + DLNLL +F+ I + S+++A E L ++ A+S SL RLR F+DPLFIR+ G Sbjct: 12 MNSLDQVDLNLLRVFQAIVEERSLTRAGERLALSQPAISYSLGRLRTLFDDPLFIRTRAG 71 Query: 64 IAPTTTGLNLHHHLEKNLRGLEQTIN---IVNKSELKKNFIIYGPQLISCSNNSMLIRCL 120 + PT L L + + L + + + + + + F + + + L Sbjct: 72 MQPTPIALELSAIVARALDTVREALRYAEHFDPAVSTRTFRVSLSDAGELAYLPPICEAL 131 Query: 121 RQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSN- 179 Q + + + E E+ L + D I +P ++ L + Sbjct: 132 HQQAP-RVRLRIEPLPVEEIEDALRASRLDFAIGNLPTLTARTRHQALFEETYVCMTRKR 190 Query: 180 -RHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSI 238 PR + + + + Q+ S + E + + R I+ + + + + Sbjct: 191 RGLPRAKE-LSLKAFLDASHVQITSVEHSHRALDDEFRTQGVGRHIALELPHFVALPSVL 249 Query: 239 AVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 AVTDL +P L + N + +L LP + + +++ + + + + Sbjct: 250 AVTDLFATLPRRLAQIFNRGGNFQIYELPVTLPIAAVTMHWHEHFDQDEGNVWLRNLMAD 309 >UniRef50_Q30XG7 Conserved hypothetical transcriptional regulator, LysR family n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q30XG7_DESDG Length = 309 Score = 303 bits (776), Expect = 6e-81, Method: Composition-based stats. Identities = 57/305 (18%), Positives = 114/305 (37%), Gaps = 12/305 (3%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 D+ +LNLLV + + ++++AAE L+IT S +S++L +LR F+DPL +RSG + Sbjct: 1 MDISSVNLNLLVALKALLDEGNVTRAAERLHITQSGMSKNLAQLRELFDDPLLVRSGNAL 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTINI--VNKSELKKNFIIYGPQLISCSNNS-MLIRCLR 121 T L LE L + + + +++F + ++ L L Sbjct: 61 VLTERARELEGPLEMVLGNVHALFEAQRFDPATCRRSFTLAVTDYVAQYILPDALGAILA 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 ++I+ + ++ L K D+ + SV + + R + H Sbjct: 121 AAPGIDIQ---AIGWEPDSMRALAEGKIDMATCLTEGVPASVEQLRVGEDRFACLMRAGH 177 Query: 182 PR-ITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAV 240 P ++ + + + V I + + +R I R + + ++ Sbjct: 178 PLAAAGAMRLDRYVQADHAAITIGGDKVRIIDRVLGKLGHSRNIRLRVPFYASAVEIVSR 237 Query: 241 TDLLGIVPYELYNSYRDFLN-----LKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDR 295 TDLL +P + + N L L + S + I ++ + + Sbjct: 238 TDLLLTLPAHVARNVIQARNPSEPALAWAPLPFAVDSFEYSIIWHARFHGDPGHRWVREM 297 Query: 296 LNESF 300 L Sbjct: 298 LFAQM 302 >UniRef50_B0C7Y6 Transcriptional regulator, LysR family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C7Y6_ACAM1 Length = 305 Score = 303 bits (776), Expect = 6e-81, Method: Composition-based stats. Identities = 62/293 (21%), Positives = 118/293 (40%), Gaps = 3/293 (1%) Query: 8 KKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPT 67 + DLNLL IFE + L++S+AAE L +T AVS +L+RLR ND LF++ G++PT Sbjct: 3 NQIDLNLLHIFEAVMMELNVSRAAERLNMTQPAVSHALRRLRRITNDELFLKVPSGVSPT 62 Query: 68 TTGLNLHHHLEKNLRGLEQTINI--VNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSS 125 L L + + L + ++ + F + L+ L + Sbjct: 63 PKALELWGPIREGLVHIRLALSPPSFEPFSSMQTFTLAMADYSVALFLPKLLPILAHSAP 122 Query: 126 VEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRIT 185 I + + NA +LL + DL + + + + + R I HP Sbjct: 123 -NINIRIVPNTNINAAKLLEQSEIDLAMGRFYRSTVRLRVQEIIGDRYICIMRKDHPLAH 181 Query: 186 DNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLG 245 T +Q + + + + ++ E ++R+I+ + + IA +DL+ Sbjct: 182 KRLTLKQYIKADHLLVTLTGEATGLVDKQLREMDLSRRIALTVNQFTLVPELIAGSDLIS 241 Query: 246 IVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 +P + +L +L + L + +++ S + +L E Sbjct: 242 AIPLRMVERNPFRTDLHITELPLKIAPAFLQMMWHERSQVDPAHEWLRSQLFE 294 >UniRef50_B7V4S2 Probable transcriptional regulator n=7 Tax=Pseudomonas aeruginosa RepID=B7V4S2_PSEA8 Length = 304 Score = 302 bits (775), Expect = 9e-81, Method: Composition-based stats. Identities = 51/301 (16%), Positives = 115/301 (38%), Gaps = 3/301 (0%) Query: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 M ++DL++ DLNLLV+ + + +S+AA+ L ++ AVS +L RLR F DPL +R Sbjct: 1 MQQIHDLRRIDLNLLVVLDALLSERHVSRAAQRLAMSQPAVSHALGRLRELFGDPLLVRV 60 Query: 61 GKGIAPTTTGLNLHHHLEKNLRGLEQTIN--IVNKSELKKNFIIYGPQLISCSNNSMLIR 118 + T+ L L L+ +L + I +++F + + L+R Sbjct: 61 KSRMQLTSLALELAPKLQASLDQVRGVIGGPTFEPVRSRRHFRLGMSDYGAWVVLPALLR 120 Query: 119 CLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICS 178 + + + + + + D + P++ V L R +C Sbjct: 121 QQQALAP-GVSFGIVQEPRLETARQVAEGQLDCALGVFPLLPEGVRARRLFEERFVCVCR 179 Query: 179 NRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSI 238 D + ++ +A ++ + +++ +++R + R+++ + Sbjct: 180 RSLFDRPDGLSLDRYLAARHVRVSLQDNPAEEVDSALEKRGLRRQVALTLPHFTVAPALL 239 Query: 239 AVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 A TDL+ + R L + +P + + + +++ Sbjct: 240 AGTDLVLTIAERTLERLRLPEELALCEPPLAIPRFDYVQIWRGDAEREAAGAWLREQIQA 299 Query: 299 S 299 + Sbjct: 300 A 300 >UniRef50_A8V9B9 LysR-like regulatory protein n=2 Tax=Betaproteobacteria RepID=A8V9B9_9BURK Length = 308 Score = 302 bits (774), Expect = 1e-80, Method: Composition-based stats. Identities = 59/297 (19%), Positives = 126/297 (42%), Gaps = 5/297 (1%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 + + D+ LL +F Y+ S+++AAE+L ++ +S +L +LR + DPLF+R+ +G+ Sbjct: 1 MIEIDVKLLNVFAETYRTSSVTQAAENLGLSQPTISFNLSKLRDHYKDPLFVRTSRGMEA 60 Query: 67 TTTGLNLHHHLEKNLRG---LEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQD 123 T L+ + L + + + SE ++ F I + L+ LR Sbjct: 61 TPFAQELYEQVVDLLASFSNIARLQTSFDPSEAQRIFRIAMTDISQIVLLPTLLNKLRIV 120 Query: 124 SSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPR 183 + + ++ E +L + +L + MP + L R ++ ++RH Sbjct: 121 AP-RAQLRISHITTE-TPRMLESGEVELAVGFMPQLDAGFYQQKLFPQRFVVLAASRHVA 178 Query: 184 ITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDL 243 + D+ + E ++ + G I + E+ ++R + + L I + +A TDL Sbjct: 179 LGDSMSLEYYLSAGHVTVTPSGTGHSIIDRTLREQQLHRHVVLDVPNYLAIADIVAQTDL 238 Query: 244 LGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 L VP +L + ++ + + +P + ++ + + L E F Sbjct: 239 LATVPQKLADLMSSSVDARRYPVPFEIPQYDVKQHWHARTHQDAGHRWLRALLAELF 295 >UniRef50_Q0VLU8 Transcriptional regulator, LysR family n=2 Tax=Alcanivorax RepID=Q0VLU8_ALCBS Length = 310 Score = 302 bits (774), Expect = 1e-80, Method: Composition-based stats. Identities = 63/295 (21%), Positives = 122/295 (41%), Gaps = 6/295 (2%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 + +FDLNL V+F+ IY S+++AA+ L +T AVS +L RLRA+ NDPLF+R G + Sbjct: 1 MHVSRFDLNLFVVFDAIYTEGSLTRAAKVLNLTQPAVSHALARLRARLNDPLFVRQGSRM 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 PT + + L G ++ ++ + SE ++ F++ + L+ Sbjct: 61 VPTARARAMVSPVRHALGGFQRCLSEEGGFDASEAERTFVLGLRDGLEARLLPALMSQFM 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 ++ I+ + +S L + DL M + ++ + ++ H Sbjct: 121 DEAP-GIKLQSLTVSRRQMATELASGRLDLACDVMLALPEAIEHQVVLEGPLVVLMRESH 179 Query: 182 PRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVT 241 P +A + + S+ G + + R I R ++++ T Sbjct: 180 PLAQG-MDLPDYLAAQHVLVSSRREGPGLEDFGLARQGYRRHIRLRCQHYQAALSTVQQT 238 Query: 242 DLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRL 296 DLL +P L D L LP +++++ +++ + S R+ Sbjct: 239 DLLLTMPASLAGQLSDQ-GLVWKPFPGGLPGLEMHLYWHRDQSADPAHSWLRQRV 292 >UniRef50_Q7W2A6 Transcriptional regulator n=3 Tax=Bordetella RepID=Q7W2A6_BORPA Length = 313 Score = 301 bits (772), Expect = 2e-80, Method: Composition-based stats. Identities = 65/296 (21%), Positives = 129/296 (43%), Gaps = 5/296 (1%) Query: 8 KKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPT 67 K DLNLL+IF+ I +++AAE L ++ SAVS+ L +LR F DPLF+R+ +G+ PT Sbjct: 4 KHLDLNLLMIFDAILAEGHVTRAAERLAMSQSAVSKGLAQLRQAFGDPLFLRASRGVVPT 63 Query: 68 TTGLNLHHHLEKNLRGLEQT---INIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDS 124 L + + + + L + + +F I +S L+R L++ + Sbjct: 64 HRALEIADQVRQAIAALNSLAGPVTEFDARSAHAHFNIGATDYVSFVLLPGLMRRLQETA 123 Query: 125 SVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRI 184 + M + EE+L+ K DLVI+ + ++ + L +C HP + Sbjct: 124 P-HVSLTLHDMESMMPEEMLLAGKVDLVISSVASVNFPIYRQELFRDHYVCLCRAGHPAL 182 Query: 185 TDNSTYEQIMAEEFTQLISKSAGVDDI-QMEIDERFMNRKISFRGSSLLTIINSIAVTDL 243 D EQ ++ + ++ + + Q + + R ++ + +L I ++ TDL Sbjct: 183 ADPVPIEQFVSSRHLAMPRQNGARERVLQDTLQRLGVTRDVAVQVPHMLAIPATLTATDL 242 Query: 244 LGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNES 299 + + + + L+ + PLP + ++ + + D + + Sbjct: 243 VATMACRVAREFAARHPLQVLAHPLPLPDFPVSQLWHDRTRRSPSHQWLRDTVYDL 298 >UniRef50_A5W6Q9 Transcriptional regulator, LysR family n=12 Tax=Pseudomonas RepID=A5W6Q9_PSEP1 Length = 326 Score = 300 bits (770), Expect = 4e-80, Method: Composition-based stats. Identities = 58/297 (19%), Positives = 119/297 (40%), Gaps = 7/297 (2%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 ++ FDLNLL +F+ + + ++S+AAE L +T VS +L RLR Q DPL +R G+ + Sbjct: 26 MNISNFDLNLLRVFDMLLREQNVSRAAERLALTQPTVSNALARLRDQLGDPLLVRVGRRM 85 Query: 65 APTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 PT L L + L+ +EQT+ + + I + L+ L Sbjct: 86 RPTPRALALEGPIRAALQQIEQTLGTGDGFEPQRSHRQLRIALTDFVEQLCMPPLLARLE 145 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 + + + ++ E L DLV+ + + P + +H Sbjct: 146 LLAP-NVRIDVVHLAPNLPAEALDRGDLDLVLGRFDEVPARFTRHPWRRETLQIALRQQH 204 Query: 182 PRI--TDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIA 239 P + + + + + + E+ + R+I++ + L + A Sbjct: 205 PHLVPGQALDLDAFLGLRHIWV-HGGQTRGMVDQWLAEQGLTRQIAYTTPNYLQAAHLAA 263 Query: 240 VTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRL 296 TD+ ++P +L + L L +L L +L + + ++ + ++++ Sbjct: 264 ATDMCVVLPRQLAQQFAHLLPLAVYELPFALEPFELEVVHLSHRQHDPALAWLVEQI 320 >UniRef50_Q393U0 Transcriptional regulator, LysR family n=6 Tax=Burkholderiales RepID=Q393U0_BURS3 Length = 310 Score = 300 bits (769), Expect = 4e-80, Method: Composition-based stats. Identities = 50/298 (16%), Positives = 115/298 (38%), Gaps = 5/298 (1%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 +L+ DLNLLV + + +++AA + ++ SA+S +L RLR D L IR+ G+ Sbjct: 1 MNLRSVDLNLLVALDALLTEKHVTRAATKVGLSQSAMSSALGRLRILMRDELLIRNATGM 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTIN---IVNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 PT L L L + L E+ + + + +F + ++ L+ L Sbjct: 61 EPTPRALELEEPLRQLLHQAERLLESDGAFDPATTAGHFRLRMSDVLEYLLMPPLLAQLE 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 Q++ + + +S L D+ ++ + +V MPL R + + H Sbjct: 121 QEAP-GVTLDVVHLSPGQTVTALEADDIDVAVSMDLEHAGAVQAMPLFDDRMVCVMARDH 179 Query: 182 PRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVT 241 P + T + ++ ++ S + ++ R + L + + + + Sbjct: 180 PCAAEALTLDLFLSLPHLKVSISSTDGRYVDAKLAGMRRARNVVLNVPHWLVVPHLLRHS 239 Query: 242 DLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNES 299 ++ ++ L + L L + +++ + + +++ E+ Sbjct: 240 SMVAVMSARLAERFAAD-GLVLKALPFESAGFHWSMYWHRRHDSVPAQAWLREKIREA 296 >UniRef50_A9AQX4 Transcriptional regulator, LysR family n=20 Tax=Proteobacteria RepID=A9AQX4_BURM1 Length = 315 Score = 299 bits (768), Expect = 6e-80, Method: Composition-based stats. Identities = 65/299 (21%), Positives = 122/299 (40%), Gaps = 8/299 (2%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 L K DLNL V+F+ IY ++++AAE L +T AVS +L R+R NDPLF+ + G+ Sbjct: 18 MRLSKIDLNLFVVFDAIYNKRNLTRAAELLNLTQPAVSNALARMRKTLNDPLFVSTPAGM 77 Query: 65 APTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 PT N+ + + L+ L+ ++ ++ + + ++ F + L L L+ Sbjct: 78 MPTPFAENIVGRVREALQLLDSSVHEGDVFDPASSERVFRLSMSDLTEALLLPALGELLQ 137 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 + + + M L + D+ I + + PL R + + H Sbjct: 138 RQAP-GMHVRSYTMDRREIATALANGTVDIAIDAPLLGDPHLHQAPLVRDRYACMIRDGH 196 Query: 182 PRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVT 241 P D T + +A + S+ G + E+ + R I R + Sbjct: 197 PFKGDTLTMDDYLAMGHIHVSSRRKGSGHVDAELTRLGLRRNIQMRVQHYMVAPLIAMRG 256 Query: 242 DLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 DL P L Y + ++L +P ++ + +++S+ + +RL E Sbjct: 257 DLALTAPLRLLQRYPA----RILELPFEMPGLEYFCYWHRSADQDQANRWLRERLAELM 311 >UniRef50_A8GG55 Transcriptional regulator, LysR family n=1 Tax=Serratia proteamaculans 568 RepID=A8GG55_SERP5 Length = 310 Score = 298 bits (764), Expect = 2e-79, Method: Composition-based stats. Identities = 61/304 (20%), Positives = 124/304 (40%), Gaps = 10/304 (3%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 +L DLNLLV+FE +YQ +++ A + L +VS +L RLR F+DPLF+RSG G+ Sbjct: 1 MNLSNVDLNLLVVFEALYQTRNVTVAGQRLNRAQPSVSNALARLRTLFDDPLFVRSGGGM 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTINI---VNKSE-LKKNFIIYGPQLISCSNNSMLIRCL 120 PT L ++ L + Q + + + ++ F + + +I L Sbjct: 61 LPTARAHQLMLQIQPVLEQIHQALTPPTRFDPATASQRRFRLAAGDYADITLLPTIISRL 120 Query: 121 RQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNR 180 RQ + I+ + + L + D+ + + ++ PL T I S Sbjct: 121 RQAAP-GIDIRVSRLDRRTVVQQLERGEIDVALGGHLEVPEGMLVQPLFNESFTCIASRH 179 Query: 181 HP-RITDNSTYEQIMAEEFTQLISK--SAGVDDIQMEIDERFMNRKISFRGSSLLTIINS 237 HP ++ +Q + + I + E + R+++ S ++ + Sbjct: 180 HPQIAAESWNLQQYIGLPHALYAPSDDGSARGIIDQRLTEMGLERRVAATFSHIIALPAV 239 Query: 238 IAVTDLLGIVPYELYNSYRDFLNLKEIKLE--HPLPSIKLYISYNKSSLNNLVFSRFIDR 295 +A +DL+ + + + D ++ + L +P+ + + + + D Sbjct: 240 VAGSDLIATLATSVARQFADPSRIQFLPLPSELAMPAFPIECVAGRQVKRDPALAWLCDT 299 Query: 296 LNES 299 L++ Sbjct: 300 LSQL 303 >UniRef50_Q1MWN1 LysR-type regulatory protein n=1 Tax=Sphingomonas sp. A4 RepID=Q1MWN1_9SPHN Length = 302 Score = 297 bits (763), Expect = 2e-79, Method: Composition-based stats. Identities = 72/300 (24%), Positives = 133/300 (44%), Gaps = 4/300 (1%) Query: 4 LYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKG 63 + ++ DLNLL +FEC++Q + +AAE L I+ AVS +L++LR ND LF+R+ G Sbjct: 1 MVKIRDVDLNLLRVFECVFQTRKVVEAAEILGISQPAVSNALKKLRELLNDELFVRTRSG 60 Query: 64 IAPTTTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCL 120 + PT + L + L+ LE I + K++F+I L LI + Sbjct: 61 MIPTQYAMQLAEPISYALKTLEIAIEASESFDPRRDKRHFVIATSDLGDMYFGPKLISHI 120 Query: 121 RQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNR 180 R S +I + S + E L + + D+++ P + ++ L ++ Sbjct: 121 RDIS-QDITIEFVGNSRPHIFESLENGEVDILLGFRPDLITNMFVFRLFYQGWRILARKD 179 Query: 181 HPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAV 240 HP + + E ++A + + S+ +G + E+ + M+R I S+ T+ +AV Sbjct: 180 HPIFSSKAPREDLLACRWIGVRSEGSGSASVNAELLKVGMDRNIVVWTSNFGTLAPLLAV 239 Query: 241 TDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 DL VP + LK + LP + ++ + N+ +++ F Sbjct: 240 GDLAACVPEIYTTVIDEAFGLKSMPFPVDLPKHSISSVWHSKAHNDPANQWLRQQVSILF 299 >UniRef50_A9CLK9 Transcriptional regulator, LysR family n=2 Tax=Alphaproteobacteria RepID=A9CLK9_AGRT5 Length = 325 Score = 297 bits (762), Expect = 3e-79, Method: Composition-based stats. Identities = 58/302 (19%), Positives = 116/302 (38%), Gaps = 5/302 (1%) Query: 3 NLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGK 62 + +L DLNLLV F+ + ++++A + T A+S +L RLR D LF+R Sbjct: 6 HPMNLHGIDLNLLVAFDALNSERNVTRAGSRIGRTQPAMSAALSRLRFLLRDELFVRGPN 65 Query: 63 GIAPTTTGLNLHHHLEKNLRGLEQTIN---IVNKSELKKNFIIYGPQLISCSNNSMLIRC 119 G+ PT + L + LR +++T+ + + +F I L+ Sbjct: 66 GLQPTPRAVELAEPISLALREIQRTLQFTQGFDPDKSTISFSIAVSAHAGSVILPRLLSL 125 Query: 120 LRQ-DSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICS 178 L + ++I+ D S ++A LL DL + P + ++ L R I Sbjct: 126 LEEKAPGIDIKVRDY-SSRDDAVSLLDSGGVDLTVGIPPTPTSRILSARLFQERFVCILR 184 Query: 179 NRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSI 238 HP + E ++ + + G+D + + R+ + + + Sbjct: 185 KDHPILGRPFDPETFLSLTHILVAPDNEGLDVADAALASKNFRRRAAVTIPHMHVAPALV 244 Query: 239 AVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 A +D++ V + L PL + +S+++ + + + L Sbjct: 245 ASSDMVATVIESVVAHSGFAERLAVFDFPLPLNPVPFVLSWHRRNDGHPAQQWLRNGLLA 304 Query: 299 SF 300 +F Sbjct: 305 AF 306 >UniRef50_A9FB16 Transcriptional regulator, LysR family n=3 Tax=Sorangium cellulosum RepID=A9FB16_SORC5 Length = 349 Score = 297 bits (762), Expect = 3e-79, Method: Composition-based stats. Identities = 56/299 (18%), Positives = 109/299 (36%), Gaps = 7/299 (2%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 L D +L+V + Q S+++AA + +T ++S +L RLRA F DPL ++ G+ + Sbjct: 41 MRLPSVDTHLVVALHALLQERSVTRAARRVGVTQPSMSHALSRLRAHFGDPLLVQVGRQM 100 Query: 65 APTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 + +L + + LEQ + + F + + L R L Sbjct: 101 TLSERARDLLPRAAEAVERLEQVFGQAERFDPRRSTRTFRLVATDNLELLVLPPLTRILA 160 Query: 122 -QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNR 180 + V + C +I + ELL + D + + + L + + Sbjct: 161 AEAPHVNLRCRNIPP---DFAELLRRGELDAKLGRGGPVPDGCRSTQLAAEQLVCLMRRG 217 Query: 181 HPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAV 240 HP T + A E + + I E+ R + R+++ S L ++ Sbjct: 218 HPASRKALTAARYAACEHLMISPHGEDHNVIDQELAARGLRRRVTLTVSHFLVAPFILSG 277 Query: 241 TDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNES 299 +DLL V + + L+L L + + + S + S + + Sbjct: 278 SDLLLTVSARVAVALARKLDLVVRPCPLEARGYTLTLVWPERSEGDEGHSWLRAAIERA 336 >UniRef50_Q1R0T8 Transcriptional regulator, LysR family n=9 Tax=Gammaproteobacteria RepID=Q1R0T8_CHRSD Length = 308 Score = 296 bits (760), Expect = 5e-79, Method: Composition-based stats. Identities = 70/296 (23%), Positives = 139/296 (46%), Gaps = 5/296 (1%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 ++ DLNL+ F +Y+ S++ AA L +T +VS SL RLR F+DPLF R+ G+AP Sbjct: 1 MRPIDLNLVRTFVTLYESGSVTLAAHKLNVTQPSVSYSLSRLRELFDDPLFSRTRDGMAP 60 Query: 67 TTTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCLRQD 123 T + L+ + L +EQT++ + + ++ F + L + + ++R +R Sbjct: 61 TFCAMRLYTSFRQALTQIEQTLSDAQHFDPEQSQRRFRLALTDLGETTLLAPILRHMRDL 120 Query: 124 SSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPR 183 + +E + + + ++ D VI + + S+ P+ R + RHPR Sbjct: 121 AP-GVELEVVPLEIDKVVSWFDNKSVDAVICSRDIQAPSLGRRPIIEERYVGLLGRRHPR 179 Query: 184 ITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDL 243 I + E E+ Q+ G ++ + ER + RK+S + + T L Sbjct: 180 IGQTLSMEAFSREDHVQVSPT-TGHGLVEDVLKERDITRKVSVVVPHFSALPRLLESTSL 238 Query: 244 LGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNES 299 L I+P ++ + +LK+++L +P +++ + +++ ++ F L E+ Sbjct: 239 LAILPEQIAGLFTQQADLKQVELPFDIPPVEVALYWSRQVDDSAAQEWFRRTLIEA 294 >UniRef50_Q2G901 Transcriptional regulator, LysR family n=2 Tax=Alphaproteobacteria RepID=Q2G901_NOVAD Length = 302 Score = 296 bits (760), Expect = 5e-79, Method: Composition-based stats. Identities = 60/299 (20%), Positives = 120/299 (40%), Gaps = 6/299 (2%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 K DLNLLV+F+ + + S+++AAE + +T A S +L+RLR F D + + GK + Sbjct: 1 MRFKGLDLNLLVVFDALMETRSVTRAAERIGLTQPATSAALRRLRDYFRDEIVVAVGKRM 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTIN---IVNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 PT LH +++ LR +E+ I+ + S + F I G I + LI Sbjct: 61 HPTPFAEALHPQIQQALRRVERAISMPTEFDPSTSTRRFRIIGSDYIMVAVLVPLIERFA 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 + + + I + + E L +ADL++T P ++ L ++ ++ Sbjct: 121 RTAP-GVRIEIIQPNEHSVAE-LEAGRADLLVTPEPFLASWHPSEVLFDEEQVVVGWAQN 178 Query: 182 PRITDNSTYEQIMAEEFTQLISK-SAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAV 240 P T + A + + + R++ S + I Sbjct: 179 PIFARGVTADDFYAAGHVTVAFGANRTPAFADSALSRMGRERRVEVTVGSFASAPWFIEG 238 Query: 241 TDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNES 299 T L ++ L NL ++ P+++ + ++++ + + ++ E Sbjct: 239 TSRLAVLHERLVRQIARRFNLAWARMPFDFPTMQEMMQFHEARAEDAGLAWLRQQMREV 297 >UniRef50_A9GGP1 LysR-family transcriptional regulator n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GGP1_SORC5 Length = 312 Score = 296 bits (759), Expect = 6e-79, Method: Composition-based stats. Identities = 58/301 (19%), Positives = 117/301 (38%), Gaps = 8/301 (2%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 +L D+NL++ + + Q S++ AA + ++ A+S +L RLR F+DPL IR G+ + Sbjct: 1 MNLSAIDVNLVIALDALLQERSVTLAARRVGLSQPAMSHALTRLRELFSDPLLIRVGRQM 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTINI----VNKSELKKNFIIYGPQLISCSNNSMLIRCL 120 A T+ + + + L + + + F I + + L L Sbjct: 61 ALTSRAEAMTPQVTAIVHDLAGLFGETTPTFDPATSDRAFRIAATEYVELVLMPRLNAAL 120 Query: 121 RQDSSVEIECHDILMSAENAEELLVHRKADLVITQMP--VISRSVICMPLHTIRNTLICS 178 Q + H + + A + L + DL I P + + PL R + Sbjct: 121 AQG-GPRLALHLLPLDGR-AVDALRSGEIDLAIGVFPQESLPPDLRRAPLFDDRFAGLAR 178 Query: 179 NRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSI 238 HP + A + + A I R + R + +L + ++I Sbjct: 179 MSHPTARGQVDLQTYAALPHVVVPRRGAHDGVADDLIAARGIARHEAMTVPHVLLVPHAI 238 Query: 239 AVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 +DL+ V L ++ + L+ L LP I++ +++N + + + + + Sbjct: 239 TASDLVATVATRLGRAFSSLVPLRTFDLPFELPPIEIAMAWNSRTERDPARAWLRGVVTD 298 Query: 299 S 299 + Sbjct: 299 T 299 >UniRef50_C6DDI5 Transcriptional regulator, LysR family n=4 Tax=Enterobacteriaceae RepID=C6DDI5_PECCP Length = 310 Score = 296 bits (759), Expect = 6e-79, Method: Composition-based stats. Identities = 57/298 (19%), Positives = 117/298 (39%), Gaps = 4/298 (1%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 D + DLNLLV F +Y+ S+S AA+ L++ AVS +L RLR F+DPLFIR+G+ + Sbjct: 3 NDFRGVDLNLLVTFLVLYRERSVSVAADKLHLGQPAVSGALARLRTLFDDPLFIRTGQVM 62 Query: 65 APTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 PT L L L+ + + + + + +L++ L+ Sbjct: 63 RPTARADYLATQLSPAFEQLQSVLGEPESFDPLTDSRAITLGMTDWVEIWLMPLLLKRLK 122 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 ++ + + + E L + DLVI+ + + L + + + Sbjct: 123 ANAP-HLRINLVATDPFLDVERLENDSVDLVISVASPQAGWLKQRALLSSGFRALWHPQQ 181 Query: 182 PRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVT 241 + E + + + + ++++ M R I + + + T Sbjct: 182 LALPSPVPLEVYSQQRHLLVTYRERAHGIVDDMLEKQGMTRTIYYTTPHFSALPGILQHT 241 Query: 242 DLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNES 299 + VP +L + L + + LP+ L ++ +N + +++ E+ Sbjct: 242 PSVATVPEKLATLWCQHYGLNDSPVPLDLPTYTLSALWHARQDSNPAIAWLYEQIAEA 299 >UniRef50_Q1N663 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Bermanella marisrubri RepID=Q1N663_9GAMM Length = 306 Score = 296 bits (759), Expect = 7e-79, Method: Composition-based stats. Identities = 62/296 (20%), Positives = 126/296 (42%), Gaps = 5/296 (1%) Query: 9 KFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTT 68 K DLNL +FE IY S+++AAE L +T A+S +L RLR + +DPLF+R G + PT Sbjct: 2 KIDLNLFTVFEAIYLEGSLTRAAERLNLTQPAISHALSRLRERLDDPLFVRQGHKMRPTP 61 Query: 69 TGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSS 125 L ++ LR L + N +E +K + + ++ + +++ L + Sbjct: 62 LAQKLIPDIQAALRQLNGALQQSHHFNPAEAEKTYRVAMRDVMEATLLPPVLKGLDNIAP 121 Query: 126 VEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRIT 185 I+ + + + E L + D V+ + S + L +I + ++ Sbjct: 122 -NIQLASVHIERRDMESKLASGELDFVVDVLLPTSEQIYKKKLLNDELVVIYNPALSQLP 180 Query: 186 DNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLG 245 + T E+ + + + ++++G + + +NR ++ R + +L Sbjct: 181 EGFTEEEYLRAKHILVSTRASGPSLVDYALSAEGLNRNVALRCQHYYAACQVASDNGMLL 240 Query: 246 IVPYELYNSYRDFLN-LKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 +P + L+ L SI +Y+ +++S + + F D L + Sbjct: 241 TMPSRYASILLQHFPTLQRSSLPFKTSSIDVYLYWHESLNEDGANAWFRDMLQQVL 296 >UniRef50_C4KB22 Transcriptional regulator, LysR family n=37 Tax=Betaproteobacteria RepID=C4KB22_THASP Length = 333 Score = 296 bits (758), Expect = 8e-79, Method: Composition-based stats. Identities = 56/301 (18%), Positives = 123/301 (40%), Gaps = 6/301 (1%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 L+ FDLNLL + +Y+ S+S+AAE L ++ VS +L RLR +PLFI++ G+ Sbjct: 22 MSLRDFDLNLLRVLLAVYEAGSVSRAAEHLGLSQPTVSSALGRLRRALGEPLFIKTASGV 81 Query: 65 APTTTGLNLHHHLEKNLRGLEQ---TINIVNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 PT L L LE + + ++ + N + + ++ +R Sbjct: 82 TPTARTHALASSARAMLARLETDFFVADRFDPAKYEGNLTVALSDVGELVFLPRILDSVR 141 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVIS-RSVICMPLHTIRNTLICSNR 180 + + + + + ++ + + DL I P + L R + Sbjct: 142 RLAPLAM-LDSVTLAPGELMRAMEDGEVDLAIGYYPDLDAAGFYREKLLDHRFVCLLRAD 200 Query: 181 HPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAV 240 HP + E+ ++ E + +K + + ++ + R+I R +++ I Sbjct: 201 HPVQDRQLSLERFLSLEHAAVRAKGRSQEIFEKYLERLRIQRRIVLRTPHFMSLPGIIGR 260 Query: 241 TDLLGIVPYELYNSYRDFLN-LKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNES 299 +DL+ +P+ + + + ++ + +P I+LY +++ ++ + Sbjct: 261 SDLVVTLPHAIGHYFTRVGEKVRMAEPPLAIPHIELYQHWHRGFHHDPRNRWLRTLVAGL 320 Query: 300 F 300 F Sbjct: 321 F 321 >UniRef50_A3Y808 Transcriptional regulator, LysR family protien n=1 Tax=Marinomonas sp. MED121 RepID=A3Y808_9GAMM Length = 301 Score = 296 bits (758), Expect = 8e-79, Method: Composition-based stats. Identities = 64/298 (21%), Positives = 118/298 (39%), Gaps = 6/298 (2%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 DL + DLNLL++F+ +Y+H S+S AA+ + I+ SA S + RLR +FND LF+R + Sbjct: 1 MDLHQIDLNLLILFDALYRHQSVSLAADEVCISQSAFSHGIARLRKRFNDELFVRVNNQM 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 PT + HL + L + IN + S K F I S L+ + Sbjct: 61 QPTPRAEEIAQHLHQALPFIHNAINDSDHFDASMDKTEFKISATDYTEFSLLPKLVGQVS 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRS--VICMPLHTIRNTLICSN 179 + I+ I A L + + D + I S + + + Sbjct: 121 HQAP-NIKLTVIGAKAPQPLTHLENNEVDFALGFSHEIEASSLIEHHTWLSDSYCTVARK 179 Query: 180 RHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIA 239 HP +T + + + ++ + + + + R +S + S+L +SI Sbjct: 180 NHPALTQGLDLDTFLELKHVRVSPWGEKQGIVDQVLAQHKLKRHVSLQLPSVLVAPHSII 239 Query: 240 VTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLN 297 +DL+ +P + + ++ +P L I ++K + + F Sbjct: 240 HSDLILTMPRIVAEQVAKQVEIEIFTPPISIPDYHLNIYWHKINADKASFKWMKQLFQ 297 >UniRef50_Q3JR86 LysR-family regultor n=70 Tax=Proteobacteria RepID=Q3JR86_BURP1 Length = 508 Score = 295 bits (757), Expect = 1e-78, Method: Composition-based stats. Identities = 57/295 (19%), Positives = 106/295 (35%), Gaps = 5/295 (1%) Query: 10 FDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTT 69 D LL + + S+++AA L + A+S +L+RLR DPL +R G+ PT Sbjct: 207 IDTYLLRVLHTLLMERSVTRAAVKLNQSQPAISAALRRLRDITGDPLLVRGKSGMVPTEY 266 Query: 70 GLNLHHHLEKNLRGLEQT---INIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSV 126 GL L ++ LR +E+ + + + + + I P ++ ++ RQ + Sbjct: 267 GLRLLEPVQNALREIERIKFQQHNFDPATSIRCYRIGCPDYLNVLFVPTVVERFRQAAPN 326 Query: 127 EIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRIT- 185 L A + E L K D+V+ P + L + SN HP Sbjct: 327 ATLEFHSLGPAFDYELALEDGKLDIVVGNWPEPPEQLHLSNLFVDEIVCLMSNSHPFAKR 386 Query: 186 DNSTYEQIMAEEFTQLISKS-AGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLL 244 T +Q + S I + + + R + + +DL+ Sbjct: 387 GGLTLDQYLNAPHLAPTPYSVGQRGAIDVHLARERLKRHVVVTLPYFNLAPYVLVKSDLI 446 Query: 245 GIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNES 299 + Y FL L + P ++ Y +++ + + E+ Sbjct: 447 FTTTRLFADHYAKFLPLSVVPAPLDFPPMQYYQLWHERCHYSDEVRWLRGLVAEA 501 >UniRef50_Q46YJ7 Transcriptional regulator, LysR family n=5 Tax=cellular organisms RepID=Q46YJ7_RALEJ Length = 394 Score = 295 bits (756), Expect = 2e-78, Method: Composition-based stats. Identities = 47/300 (15%), Positives = 103/300 (34%), Gaps = 4/300 (1%) Query: 4 LYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKG 63 ++ D LL + + S+++ A L + A+S +L+RLR D + +R G Sbjct: 80 MHGRDHLDTYLLRVLHTLLTEQSVTRTAVRLGQSQPAISNTLKRLREITGDAILVRGKSG 139 Query: 64 IAPTTTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCL 120 + PT G L E++L +++ + + + F + P + ++ + Sbjct: 140 MVPTERGRELLELAEQSLAAMDRIARPPQQFDPATTTRTFHLGAPDYLDAFFLPNIVERV 199 Query: 121 RQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNR 180 R+ + + S+ + E L + D+VI + PL + + Sbjct: 200 RRLAPGAKLFVHPMTSSSDFLEDLEQGQLDIVIGNWLSPPEHLHISPLFDDEVVCMLGAQ 259 Query: 181 HPRITDNSTYEQIMAEEFTQLIS-KSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIA 239 HP T + + S I + E+ R I + + Sbjct: 260 HPLARKGLTLKHYLEMPHLAPAPYASMQRSMIDQALAEQGYKRNIQVTLPYFGLVPYVLM 319 Query: 240 VTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNES 299 TD++ + Y +L ++ + P ++ Y +++ + E Sbjct: 320 KTDMVFTTGRQFAAHYAQYLPIRMVPSPVTFPRMRFYQLWHERCHAAPDVMWMRRMIAEV 379 >UniRef50_A4XX96 Transcriptional regulator, LysR family n=3 Tax=Proteobacteria RepID=A4XX96_PSEMY Length = 312 Score = 295 bits (756), Expect = 2e-78, Method: Composition-based stats. Identities = 61/296 (20%), Positives = 118/296 (39%), Gaps = 7/296 (2%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 D ++ DLNLLV E + ++++AA L+++ AVS L RLR FNDPL I + +G+ Sbjct: 1 MDTRRLDLNLLVTLEALLIEQNVTRAAARLHLSQPAVSAQLSRLRDVFNDPLLIPAQRGM 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 PT L L L + L + T+ + I + + L+ +R Sbjct: 61 TPTVKALELLVPLRQALDQVRATVTTHLNFEPATASLTVSIACTDYVQAALIKHLVVAMR 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 +++ + ++ E + + DL + M ++ L+ LI H Sbjct: 121 REAP-GVRIALRILDVPQLELQMTRGEVDLAVINMNGAPPALHAQHLYDESYVLIGRRGH 179 Query: 182 PRITDNSTYEQIMAEEFTQLISKSAGVDD-IQMEIDERFMNRKISFRGSSLLTIINSIAV 240 P + T ++ E + + G + + R + R + SS L + +A Sbjct: 180 PSLHAGLTVDEFAQLEHVVVSLRGGGFSTSVDNALVARGLRRNVVLSASSFLPVPELVAQ 239 Query: 241 TDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRL 296 +D + +VP L L + P+ + + +++ S + F + + Sbjct: 240 SDCVALVPRRLVE--GRDEQLLCVAPPLPVEGFAIGMFWHERSDGHAGFRWVREFI 293 >UniRef50_A9AQZ4 Transcriptional regulator, LysR family n=24 Tax=Burkholderiaceae RepID=A9AQZ4_BURM1 Length = 327 Score = 295 bits (756), Expect = 2e-78, Method: Composition-based stats. Identities = 58/300 (19%), Positives = 117/300 (39%), Gaps = 7/300 (2%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 + DLNL+ + ++S+A E L ++ VS +L RLRA F DPLF+R+ +G+ P Sbjct: 20 MDALDLNLIPYLVALDDTRNVSRAGELLGVSQPRVSTALGRLRAYFGDPLFVRTSRGMEP 79 Query: 67 TTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQD 123 T L L L +E+ + + + + F I + L++ Q Sbjct: 80 TPRALALLPAARDALAQIERGLVAPHDFDPAASTHTFSIALSDVGEIVFLPKLLQAFAQC 139 Query: 124 SSVEIECHDILMSAENAEELLVHRKADLVITQMPVIS-RSVICMPLHTIRNTLICSNRHP 182 + + + + L DL + P + + L T R + HP Sbjct: 140 AP-HANLRSVSLPHDEVGRGLEAGSIDLAVGYFPDLDGNNFFQQRLFTHRFVCLMRRGHP 198 Query: 183 RIT-DNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVT 241 T EQ + + ++ + ++ + ++ M R+ +++ ++ T Sbjct: 199 LEQARPFTVEQFLESGHAVVRAEGRSQEVLEKYLAKQRMQRRAVLETPHFMSLPFILSRT 258 Query: 242 DLLGIVPYELYNSYRDFLN-LKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 DL+ VP+ + +Y + ++ PLP L +++ N+ + + F Sbjct: 259 DLIATVPHAIGYAYAAEHAFIVPVEPPLPLPRFDLKQHWHRKFHNDPRTAWLRGVVASLF 318 >UniRef50_A6FYP7 Transcriptional regulator, LysR family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FYP7_9DELT Length = 312 Score = 294 bits (755), Expect = 2e-78, Method: Composition-based stats. Identities = 61/308 (19%), Positives = 122/308 (39%), Gaps = 13/308 (4%) Query: 3 NLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGK 62 ++ +L + DLNLLV F+ + + S+++AA L +T SA+S +L+RLR D L +R+ Sbjct: 5 HVDELAQLDLNLLVAFDVLAEERSVTRAAARLGVTQSAMSHTLRRLRGVLEDELLVRTRG 64 Query: 63 GIAPTTTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRC 119 G+A T L + L L++ + + + +++F + GP L LI Sbjct: 65 GMALTPRAAALVAPVRTGLTTLQRALADPEGFDPATSERHFRLTGPDLFELLYLPRLIAG 124 Query: 120 LRQDSSVEIECHDILMSAENAEELLVHRKADLVI------TQMPVISRSVICMPLHTIRN 173 + + ++ + L + DL I + ++ L Sbjct: 125 FGASAG-RLSVTLAHVAPRQLADQLETGELDLAITARMLDGREQPAQPGLMRRVLLRDGW 183 Query: 174 TLICSNRHPRI--TDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSL 231 HP + + + +A + G + + + E+ R ++ R SS Sbjct: 184 RCFVRAGHPALTKRGRLSLPRFLAASHVMVSPTGRGQGIVDVVLAEQDEQRTVAVRVSSF 243 Query: 232 LTIINSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSR 291 T A +DL+ P L + L L + PLP + +++++ + Sbjct: 244 ATAPVVAASSDLILTAPASL-EAVVGHLGLVCVAPPLPLPEHSVDMTWHQRLSEDPGHQW 302 Query: 292 FIDRLNES 299 ++L + Sbjct: 303 LREQLVAA 310 >UniRef50_Q08NF6 Transcriptional Regulator, LysR family n=1 Tax=Stigmatella aurantiaca DW4/3-1 RepID=Q08NF6_STIAU Length = 322 Score = 294 bits (755), Expect = 2e-78, Method: Composition-based stats. Identities = 52/297 (17%), Positives = 116/297 (39%), Gaps = 6/297 (2%) Query: 2 ANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSG 61 + L D NLLV+ + + Q + +A++ + ++PSA S +L RLR D L +R+G Sbjct: 10 MHPVQLSSIDTNLLVVLDALLQEGHVGRASKRVALSPSATSHALARLRELLGDELLVRAG 69 Query: 62 KGIAPTTTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIR 118 + + T + L + + + +E+ + + ++L+ F + I L R Sbjct: 70 RQLVLTPRAIALAPQVRQLMEQMERILRPAESFHPAKLEHTFRVLTTDHIEFVLLRPLDR 129 Query: 119 CLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICS 178 L ++ + H+ M +A E L +ADL + + L R + Sbjct: 130 FLTDEAP-RVILHNRPM-VPDAVEELRGGRADLAFGVFTDLPDDISSQELFKDRFVTLVR 187 Query: 179 NRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSI 238 HP + T ++ + + + + + + ER + R++ S L+ + Sbjct: 188 EGHPVLARPLTLKRFAELDHVLVAPRGTATSRMDLLLAERNLKRRVVRTLGSFLSAPFFV 247 Query: 239 AVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDR 295 A +D + + ++ L L+ ++ L +++ + + Sbjct: 248 AQSDHAVTLSARIADALAPLLGLRVLEPPIAY-EYTLTQIWHRRWDADPAHAWLRQL 303 >UniRef50_Q89IY7 Transcriptional regulatory protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89IY7_BRAJA Length = 307 Score = 294 bits (754), Expect = 2e-78, Method: Composition-based stats. Identities = 57/300 (19%), Positives = 115/300 (38%), Gaps = 7/300 (2%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 + DLNLL +FE + S+++AA +L +T AVS +L RLR DPLF+RSG GI P Sbjct: 5 FRALDLNLLKVFEALMTEGSVTRAASALTMTQPAVSNALARLRDALGDPLFVRSGTGIRP 64 Query: 67 TTTGLNLHHHLEKNLRGLEQTINI--VNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDS 124 T + L + + L + ++ + + + F + +S L+ L + + Sbjct: 65 TQRAVVLWEPIGEALESVRGALDEQVFDPARAQTEFSLSMSDYVSSLVMPDLLGHLGKVA 124 Query: 125 SVEIECHDILMSAENAEELLVHRKADLVITQM---PVISRSVICMPLHTIRNTLICSNRH 181 H + + + L + D V++ ++ L T+ H Sbjct: 125 PKA-RVHTVPNTILEIADQLEDNRVDCVMSVYVNEAQQPAAIRSRSLWTVDYACFMRRGH 183 Query: 182 PRIT-DNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAV 240 P + + + + + + R ++R + + + Sbjct: 184 PLAGMKRLSTRTFLNAGHVDVSLAGKTMPSYDLFLASRGLSRNLVATVNHYSAAYEVVRQ 243 Query: 241 TDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 +DL+ ++P +L + R L + L P + + +++ + + L E F Sbjct: 244 SDLIAVLPSDLRSQSRHAPLLHAMPLPLQAPPRIVSLFWHQRNDTVPAQRWLRETLVEMF 303 >UniRef50_C5AL93 Transcriptional regulator, LysR family protein n=13 Tax=Burkholderia RepID=C5AL93_BURGB Length = 331 Score = 294 bits (753), Expect = 3e-78, Method: Composition-based stats. Identities = 53/302 (17%), Positives = 110/302 (36%), Gaps = 7/302 (2%) Query: 4 LYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKG 63 + L DLNLL +F I + S++KA L ++ A+S SL RLRA F+DPLF+R+ G Sbjct: 1 MRSLDGVDLNLLQVFLAIVEEQSLTKAGARLALSQPAMSYSLARLRALFDDPLFVRTRHG 60 Query: 64 IAPTTTGLNLHHHLEKNLRGLEQTIN---IVNKSELKKNFIIYGPQLISCSNNSMLIRCL 120 + PT L + + L + + + + + + F + + + + Sbjct: 61 MQPTPISQELAVIVARALDTVREALRYAERFDPAVSTRAFRLSLSDAGEMAYLPSICEEV 120 Query: 121 RQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSN- 179 + + I+ + E+ L R+ D I +P ++ L + Sbjct: 121 NRLAP-NIKVVVQPLPVGEIEDALRARRLDFAIGNLPELTARTRHQVLFEEGYVCMMRRR 179 Query: 180 -RHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSI 238 P T + + S + + + + R I + + + Sbjct: 180 VGGP-ARPALTLAEFGRASHVLVRSIEHSHHALDDALRTQGVARNIGLEVPHFVALPRVL 238 Query: 239 AVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 AVTD + +P L + +L + + + + +++ + + L + Sbjct: 239 AVTDFVATLPRRLAQIFAKDGAFDIFELPVAIAPVGVTMHWHEHFHEDEGIAWMRQLLGQ 298 Query: 299 SF 300 Sbjct: 299 IM 300 >UniRef50_Q2KYC5 LysR-family transcriptional regulator n=9 Tax=Burkholderiales RepID=Q2KYC5_BORA1 Length = 306 Score = 294 bits (753), Expect = 3e-78, Method: Composition-based stats. Identities = 56/297 (18%), Positives = 116/297 (39%), Gaps = 7/297 (2%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 L+K DLNLLV+F+ + + +IS A L ++ AVS +L+RLR F D LF+R+ +G+ P Sbjct: 10 LRKLDLNLLVVFQHLLEERNISAVARRLDLSQPAVSNALRRLRLAFGDELFVRTAQGMLP 69 Query: 67 TTTGLNLHHHLEKNLRGLE---QTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQD 123 T + + + L L + + ++ I L+ + Sbjct: 70 TPLAEGMGGQVSEALSLLSHLADAAQPFDPATSQRRLRIAMSDAGEIHFMPTLMELCARH 129 Query: 124 SSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPR 183 + + + + + L + DL + + ++ L + HPR Sbjct: 130 VP-GVRIDSLRCT--DLQRELDTGRVDLALGAFDGLGSGIVQRMLFRQGYATLFRAGHPR 186 Query: 184 ITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDL 243 + AE+ + ++A I ++ + + F + ++ TDL Sbjct: 187 AYAGMSARAFRAEQHLVVS-RAAPDGQINQALERAGVVLQEQFSVPHFAAVPYIVSTTDL 245 Query: 244 LGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 L VP +L S L+ + L +P ++ + +++ + + ++F Sbjct: 246 LATVPEKLAASAAPRFGLQVLTLPIKVPLLQTNLYWHRRFQRDGANQWLRGLIIDTF 302 >UniRef50_Q0SCY7 Transcriptional regulator, LysR family protein n=3 Tax=Actinomycetales RepID=Q0SCY7_RHOSR Length = 331 Score = 292 bits (750), Expect = 6e-78, Method: Composition-based stats. Identities = 70/300 (23%), Positives = 129/300 (43%), Gaps = 5/300 (1%) Query: 4 LYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKG 63 + + DLNL+ F +Y+ S+++ AE L+IT +VS SL+RLR QFND LFIRS G Sbjct: 25 IIGMADVDLNLIRTFVLLYETRSVTRTAELLFITQPSVSHSLRRLRRQFNDDLFIRSSDG 84 Query: 64 IAPTTTGLNLHHHLEKNLRGLEQTIN---IVNKSELKKNFIIYGPQLISCSNNSMLIRCL 120 +APT +++ L + L +++T++ + + F I L S ++ L Sbjct: 85 LAPTVLAASMYPQLHQALEVIDETVSGVGHFDAETSDRTFRICATDLGEISLLPGVLAAL 144 Query: 121 RQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNR 180 + + +A E L +AD VI + + + PL +C+ Sbjct: 145 ETRAP-GCAVQVTPLDFASAAEELRQGRADAVICTPRIDAPDLRRDPLFREGYVGLCALG 203 Query: 181 HPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAV 240 HPRI + +AE + + AG D + R I+ R + +A Sbjct: 204 HPRIGVEPGLDDFLAERHIVVDAA-AGHVDADQALARMGRRRDIAVRVPHFAVLPELVAQ 262 Query: 241 TDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 T L +VP + + ++ L +P++++ + + +L + + + + Sbjct: 263 TRHLAVVPSRVAELFTRSSPVRTFALPVEIPNVEVSLFTVRRALPSPGVDWLRELIADVL 322 >UniRef50_A6VSJ2 Transcriptional regulator, LysR family n=28 Tax=Proteobacteria RepID=A6VSJ2_MARMS Length = 328 Score = 292 bits (750), Expect = 7e-78, Method: Composition-based stats. Identities = 55/300 (18%), Positives = 115/300 (38%), Gaps = 4/300 (1%) Query: 4 LYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKG 63 + +L++ DLNLLV + +S+AA+ L+ + A+S +L LRA FNDPL +R Sbjct: 20 MNNLRRIDLNLLVTLHALLVEKHVSRAAQRLHKSQPAISHALANLRAIFNDPLLVRRTGK 79 Query: 64 IAPTTTGLNLHHHLEKNLRGLEQTINI--VNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 + T+ L L + L L I ++ K+ F + S LI+ LR Sbjct: 80 LELTSRANELLPTLTEALHQLGALIEQPTFESTQAKRVFRLAMSDYGSRVVLPGLIQILR 139 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMP-VISRSVICMPLHTIRNTLICSNR 180 + I+ I S + + + D+ +S + L Sbjct: 140 SRAP-GIDLQVIQGSRTSMLTGVYDGEIDMAFGVFNSPLSDELHTHTLFIEHFICAADKN 198 Query: 181 HPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAV 240 T + Q ++ + ++ ++I+ + ++R+I+ + +A Sbjct: 199 TLPKTGSLEKTQWLSRPHILVAMQTNESNEIENALHREGVSRRIAMTLPHWGVASHMVAN 258 Query: 241 TDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 TDL+ ++ + + L+ +P+ K + ++ ++ + + E Sbjct: 259 TDLILTAARRSFDLFLEDSPLQLFTPPYPIDPFKFSMVWHSRRESDAGHNWLRHTIIEML 318 >UniRef50_C5CVL6 Transcriptional regulator, LysR family n=5 Tax=cellular organisms RepID=C5CVL6_VARPS Length = 327 Score = 292 bits (749), Expect = 8e-78, Method: Composition-based stats. Identities = 64/304 (21%), Positives = 118/304 (38%), Gaps = 6/304 (1%) Query: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 M + K DL+L+ + + S+S+AA L + AVS +L+RLR DPL +RS Sbjct: 1 MRDQALFDKIDLHLIRVLHTVLTDRSVSRAAIRLGMYQPAVSAALKRLRELSGDPLLVRS 60 Query: 61 GKGIAPTTTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLI 117 G G+ PT GL + LR E + F I + ML+ Sbjct: 61 GSGMVPTDAGLRMIEPAASILRAAEMLFSDARGFEPQSAATTFRIAASDYMDPLFLPMLV 120 Query: 118 RCLRQDSSV-EIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLI 176 +++++ + +IE H + + + L + DLVI + L + Sbjct: 121 AHVKREAPLCQIEIHALTPDS-DYHGHLALGQVDLVIGNWLKPPEDLHMARLFGDEVVSL 179 Query: 177 CSNRHPRITDNSTYEQIMAEEFTQLIS-KSAGVDDIQMEIDERFMNRKISFRGSSLLTII 235 + HP + E +A E G I +DE R I+ R + I Sbjct: 180 VNQDHPAVRRGWDLETWLAAEHIAPTPMHPGGRGIIDQMLDELGRQRNITARCAHFSLIP 239 Query: 236 NSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDR 295 + +A + L+ + + L +K ++ LP + Y +++ + ++ + Sbjct: 240 DMVASSLLVLTTGRQYCERFAARLPVKILECPVALPRLMYYQLWHERTHSSSSARWLREC 299 Query: 296 LNES 299 + + Sbjct: 300 IKDV 303 >UniRef50_B7RYN1 Transcriptional regulator, LysR family protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RYN1_9GAMM Length = 303 Score = 292 bits (749), Expect = 8e-78, Method: Composition-based stats. Identities = 59/300 (19%), Positives = 123/300 (41%), Gaps = 6/300 (2%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 +L+ DLNLL +F+ + S+++AAE + ++ A+S +L R R D LF R+G+G+ Sbjct: 1 MNLRSVDLNLLTVFDAVITEGSVTRAAEKIGMSQPAMSIALTRFRHIAKDELFERTGRGL 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTIN---IVNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 PT L L + + L + + + S ++F + + L+R L Sbjct: 61 RPTPRALELAAPIRRALDIVTDALEHGTDFDMSRSDRSFSVVLSGIGEIVMLPTLMRRL- 119 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 + + I + ++ + + + DL + +P+ S +IC + + H Sbjct: 120 ESTGSRININTRHVAHGDMLKEMHFGNVDLYMWIVPIESSEIICTQIGNTSEVCLVRADH 179 Query: 182 PRITDNSTYEQIMAEEFTQLISKSA-GVDDIQMEIDERFMNRKISFRGSSLLTIINSIAV 240 P + D+ + + A G I E+ + R+ S S ++ Sbjct: 180 PYVGDSLSVNEFAALRHVTFHMPGTYGPSIIDRELWRLGLKREHSMSVHSYFDAPRVLSQ 239 Query: 241 TDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 TD++ +P L + LK ++ L +++ + K++ + + L + F Sbjct: 240 TDMVCTMPRVLGRHFARVHGLKMVRSPLQL-EFPVFMLWPKAAEKDKGHQWLRETLIDIF 298 >UniRef50_A6X639 Transcriptional regulator, LysR family n=1 Tax=Ochrobactrum anthropi ATCC 49188 RepID=A6X639_OCHA4 Length = 324 Score = 292 bits (749), Expect = 9e-78, Method: Composition-based stats. Identities = 60/319 (18%), Positives = 126/319 (39%), Gaps = 24/319 (7%) Query: 4 LYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKG 63 + + DLNL+ +F + + +++KA E L +T SAVS +L +LR +D LF+R +G Sbjct: 1 MSSIHNIDLNLIRVFNALMEERNVTKAGERLNLTQSAVSHALGKLRYILSDELFVRGPQG 60 Query: 64 IAPTTTGLNLHHHLEKNLRGLEQTINI--VNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 + PT L L L + ++ + + +F++ + ++ L Sbjct: 61 MHPTPRAEELSQPLRSALADISAALSPVQFDPATADMSFVVATSDFYIGTLFPAVMERLE 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 +++ I L + N E L LV+ I L ++ N I H Sbjct: 121 KEAP-GIRLWLRLFNDLNLVEELDRGTLHLVVGAFGRIPSRFRRETLVSVDNVWIMRKDH 179 Query: 182 PRITDNSTYEQIMAEEFTQLISKSA---------------------GVDDIQMEIDERFM 220 P + T E + ++ ++ + E + Sbjct: 180 PASSGPLTIETLGHYPHIDVLLSGRAAMEAAGMQEQEGLERAFVTSNPPFLEGLLREVGL 239 Query: 221 NRKISFRGSSLLTIINSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYN 280 +R+I S +L + +A T+++ ++P + +Y+D L + +PLP+ ++ + + Sbjct: 240 SRRIGATVSLILAVPPLVAATNMIALLPRSVAETYKDTYGLVLHEAPYPLPATQINMLSH 299 Query: 281 KSSLNNLVFSRFIDRLNES 299 + + + L E+ Sbjct: 300 NTFGAHPAVAWLRSVLREA 318 >UniRef50_A1VMI6 Transcriptional regulator, LysR family n=28 Tax=Bacteria RepID=A1VMI6_POLNA Length = 333 Score = 291 bits (747), Expect = 2e-77, Method: Composition-based stats. Identities = 54/282 (19%), Positives = 108/282 (38%), Gaps = 6/282 (2%) Query: 22 YQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTTGLNLHHHLEKNL 81 Y S+++AAE L + VS L RLR Q DPLF+R+ +G+ PT L + + L Sbjct: 53 YNTRSVTRAAEQLGQSQPTVSIWLARLRRQLGDPLFVRTPEGMLPTPRTDALIATVREVL 112 Query: 82 RGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSVEIECHDILMSAE 138 GL + + + ++ F I+ + L +R + ++ + A Sbjct: 113 EGLRRLSESESRFDPATAQRGFRIFMTDASHITLLPRLFSHVRALAP-QVRLEAATIDAR 171 Query: 139 NAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRITDNSTYEQIMAEEF 198 L + DL + +P + L +C+ RHPRI + T + AE Sbjct: 172 -MAPALQSGEGDLALGLVPGLEAGFYQQTLFGQDWICLCNARHPRIGEMFTLQDYAAEAH 230 Query: 199 TQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLGIVPYELYNSYRDF 258 + G + + + + R++ L + ++ +DL+ +P + + + Sbjct: 231 IGI-VSGTGYQLLDGALKSQGIARRVLLELPGFLGLAAILSTSDLVATLPRHIGETLANA 289 Query: 259 LNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 L+ + +P + ++ ++ E F Sbjct: 290 AGLRVLPCPFEIPGFTVKQYWHARYHHDAGNRWLRGVCAELF 331 >UniRef50_B0C4T0 Transcriptional regulator, LysR family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C4T0_ACAM1 Length = 307 Score = 291 bits (747), Expect = 2e-77, Method: Composition-based stats. Identities = 46/283 (16%), Positives = 119/283 (42%), Gaps = 7/283 (2%) Query: 17 IFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSG-KGIAPTTTGLNLHH 75 F+ + Q S+++AAE L ++ SA+S +L+RLRA DP+ IR+ + + T L + Sbjct: 18 AFDILVQEASVTQAAEKLNMSQSAMSHALKRLRAVLKDPILIRTSQRQMEVTPYALEISP 77 Query: 76 HLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSVEIECHD 132 + + L +++T+ ++ N + +++F I + + ++ L++ L Q + I+ Sbjct: 78 QVRQILAEIQETLLAKDVFNPATAQEDFRIATNDYVEATLSANLLQQLTQQAP-GIQIRV 136 Query: 133 ILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRITDNSTYEQ 192 ++ + L DL I + R + L+ + + P + EQ Sbjct: 137 KGLNKDAVLAALDDNSIDLFIGAGLDLKRWHVQESLYQEEFVCVLQSDCPL--TELSLEQ 194 Query: 193 IMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLGIVPYELY 252 + + + + ++++ +R++ + + + +A +D + ++P + Sbjct: 195 YVERTHILVSFQDDFRGIGDLILEQQQQSRQVVWSTPHFMVVPFLLANSDCVALLPKRMA 254 Query: 253 NSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDR 295 + LK + + + + +++ N + Sbjct: 255 ERCAKEMGLKLLPPPIDVTRFTVSMIWHQRHNNRPQHQWLRKQ 297 >UniRef50_A6W028 Transcriptional regulator, LysR family n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W028_MARMS Length = 309 Score = 291 bits (746), Expect = 2e-77, Method: Composition-based stats. Identities = 64/299 (21%), Positives = 110/299 (36%), Gaps = 5/299 (1%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 KK DLNLLV + + SI+K AE L ++PSA+S SL RLR F D L + G+ + Sbjct: 1 MRFKKLDLNLLVALDTLLTEQSITKGAEKLNMSPSALSNSLSRLRDYFEDDLLTQIGRRM 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 T G NL + L +E TI + F I+ + + Sbjct: 61 VITPLGENLKVSVRNALNNIESTILVQPSFEPQTTDRIFSIFCSDYTQTVLVPHALEIVG 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 + + A N E L KADL+I +S C L+ + Sbjct: 121 KQ-KSTARFQLLAQVANNPHEQLEQGKADLLIIPSDFMSTEHPCDILYEEEFVCVVWKHS 179 Query: 182 PRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEI-DERFMNRKISFRGSSLLTIINSIAV 240 + T E+ A + ++ D + + R + S ++ + Sbjct: 180 KIASGELTAEKYAAAGHVLMRPEATKKDFFGTLFTQKYGIKRHVIATTFSFASLPALVIG 239 Query: 241 TDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNES 299 ++ + + L LK + L +P +K + +++ N+ + L E+ Sbjct: 240 SENIATIHARLATKMAKVWPLKILPLPFDIPPMKQCVQWHQYRNNDEGLIWLRNTLKEA 298 >UniRef50_B5XYZ1 Transcriptional regulator, LysR family n=5 Tax=Klebsiella RepID=B5XYZ1_KLEP3 Length = 308 Score = 291 bits (746), Expect = 2e-77, Method: Composition-based stats. Identities = 61/291 (20%), Positives = 113/291 (38%), Gaps = 4/291 (1%) Query: 10 FDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTT 69 D L F +Y+ ++S AA++L I+ S L++LR F DPLF+R G+ + PT Sbjct: 5 LDFKSLRFFSALYRLGNVSPAADALNISQPTGSLLLKKLRDHFADPLFVRVGQRMMPTPR 64 Query: 70 GLNLHHHLEKNLRGLEQTIN---IVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSV 126 + + L+ + + + ++NF I + + +L L+Q ++ Sbjct: 65 ADAIAPTVFTLLQLADNDLAVKPEFLPQQSQRNFTIGMTDISQMTLLPLLQIALQQQAAD 124 Query: 127 EIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRITD 186 I + E L K DL I + + SV L + + HPRI Sbjct: 125 GITFTIQNLD-EQTLNALESGKCDLAIGYLTQLPDSVYQQHLFDQSYVCLAAENHPRIRT 183 Query: 187 NSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLGI 246 E E+ + + D+ +DE M R+I+ S L +A +D++ + Sbjct: 184 QLRAEDWRQEKHLAIRVEGTAHGDMDKRLDEHSMPRRIALTLPSFLGTGELVAESDMIAV 243 Query: 247 VPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLN 297 VP ++ + L PL I + +++ + + Sbjct: 244 VPEQVARHITRRYPCRSWPLPFPLARIAIRQVWHQRLHRDPGHIWLRSLIA 294 >UniRef50_Q13GK2 Transcriptional regulator, LysR family n=1 Tax=Burkholderia xenovorans LB400 RepID=Q13GK2_BURXL Length = 311 Score = 291 bits (745), Expect = 3e-77, Method: Composition-based stats. Identities = 57/304 (18%), Positives = 123/304 (40%), Gaps = 5/304 (1%) Query: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 M + D+ LL++F+ + + S+S+AA+ + +T SAVSQ L RLR F+DPLFIR+ Sbjct: 1 MRRNPRVDTLDIKLLLVFDALLRERSVSRAADDVGLTQSAVSQKLGRLRDIFSDPLFIRT 60 Query: 61 GKGIAPTTTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLI 117 G+ PT L L L + L + ++ + ++NF + +S ++ Sbjct: 61 ANGMEPTPHALVLSAQLAELLARWKSLVSSQQRFEPATAERNFRVALSDGMSYHCLPPVV 120 Query: 118 RCLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLIC 177 R +R+ + + + + + + ADL + + L + Sbjct: 121 RRIREIAP-NLRITIVHVGPRGGQREIESGSADLALGVFQQPPIGISTCELFRYTLQCVA 179 Query: 178 SNRHPRI-TDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIIN 236 +PR+ + ++ + + + +++ ++ + RKI+ ++I N Sbjct: 180 DKNNPRLKQGTMSRDEYLEASHIAVGENNVPGTLVEVIVEALGLKRKIALVTPHFVSIPN 239 Query: 237 SIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRL 296 + TDL+G P ++Y L + P+ ++ + + Sbjct: 240 LVLGTDLIGTFPSSAQDAYPFSNQLCFFPIPFPISESIAMAMWHPRFDGDPGHMWLRNLF 299 Query: 297 NESF 300 ++ Sbjct: 300 ADTL 303 >UniRef50_Q15XJ4 Transcriptional regulator, LysR family n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15XJ4_PSEA6 Length = 299 Score = 291 bits (745), Expect = 3e-77, Method: Composition-based stats. Identities = 55/299 (18%), Positives = 118/299 (39%), Gaps = 8/299 (2%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 K DLNLLV + + ++++A E ++++ S +S ++ RLR F+D LF++ G+ + Sbjct: 1 MRFKGLDLNLLVALDALIAERNVTRAGERIHLSQSGMSSAVSRLRQYFDDELFVQVGREL 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 PT+ L + + L +E TI + + ++ + I +L + +I L Sbjct: 61 IPTSLTETLAKPVRRILVEMENTIISRPKFDPASDERCYRIAASELTTMVLMPTVISRLA 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 QD+ I + + + L DL+I ++ IC + Sbjct: 121 QDAP-NIRLNLSTIGETDL---LDKGDIDLMIIPKQFTQDGHPFDEIYQEGYKCICWQEN 176 Query: 182 PRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDER-FMNRKISFRGSSLLTIINSIAV 240 I + T+E + + ++R++ S+LL + I Sbjct: 177 TSIGEKITFEDYQSAGHVVVSYGKNNAPAFDSWFMSHYGISRRVEIMTSNLLAPPSLIIG 236 Query: 241 TDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNES 299 T + V L L ++ ++ +P + + Y+++ N++ S + + Sbjct: 237 TQRIATVHSRLAQIVSQSLPIRVLQPPIEIPPLTQSMQYHRNRENDVGLSWLRQLIIDV 295 >UniRef50_A3YHF6 Transcriptional regulatory protein n=2 Tax=Gammaproteobacteria RepID=A3YHF6_9GAMM Length = 308 Score = 290 bits (744), Expect = 3e-77, Method: Composition-based stats. Identities = 67/292 (22%), Positives = 125/292 (42%), Gaps = 4/292 (1%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 + K DLNL+VIF+ I + SI+ AA+SL +T +VS ++ R+R + DPLF++ G+GI P Sbjct: 1 MAKTDLNLVVIFDAIMKEKSITSAADSLAMTQPSVSNAVSRMRHAWKDPLFVKEGRGIRP 60 Query: 67 TTTGLNLHHHLEKNLRGLEQTINI--VNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDS 124 T L + + L + I + K +F I + L + Q++ Sbjct: 61 TPYATKLWKRVAEPLAQINHAIAPEYFDPLTSKASFRIGITDGSASIVWPELRHIIEQEA 120 Query: 125 SVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRI 184 I + + + E LL + DLV S + ++ + + H Sbjct: 121 P-NINIYAVPYKV-DGELLLNNADVDLVFDYYDGNSDEIFYKSMYENQFVTVMRADHELA 178 Query: 185 TDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLL 244 + T E+ + E + + ++ E R+ + +S + IN I T L+ Sbjct: 179 NEELTLERYIKSEHLLVSLSGDVCGIVDDKLAELNAKRRTAMTVNSFASAINLIKQTRLI 238 Query: 245 GIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRL 296 +PY + + +L + LPSIK+ ++++ + ++ I L Sbjct: 239 ITMPYPIIAEHLAAGDLVLKPVPLELPSIKISLAWHSRNNHSQALKWLIKVL 290 >UniRef50_A4Z170 Putative transcriptional regulatory protein, LysR-family n=1 Tax=Bradyrhizobium sp. ORS278 RepID=A4Z170_BRASO Length = 313 Score = 290 bits (744), Expect = 4e-77, Method: Composition-based stats. Identities = 52/304 (17%), Positives = 112/304 (36%), Gaps = 8/304 (2%) Query: 1 MAN--LYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFI 58 M N + L DLNLLV+FE + ++++AA + + + S++L RLR F DPLF+ Sbjct: 1 MKNDQMPSLAHVDLNLLVLFEALLSERNVTRAAVRVGLAQPSASKALDRLRHLFGDPLFL 60 Query: 59 RSGKGIAPTTTGLNLHHHLEKNLRGLEQTIN---IVNKSELKKNFIIYGPQLISCSNNSM 115 R+ G+ PT L L + L + + + + + + + Sbjct: 61 RAPGGMRPTPRALELAPEIALVLERVRALVAAELPFDPATARGSLRLAMSDAAEFVLLPG 120 Query: 116 LIRCLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTL 175 L+ L + + + + L + D V+ + + PL R Sbjct: 121 LVAQLAGTAP-GVTLQARPLDKDRVFAELDEGRLDAVVGVFRELPKRFRSAPLFEERFVC 179 Query: 176 ICSNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTII 235 + HPR+ T E + + + + ++ ++R+++ + L + Sbjct: 180 LARADHPRLATGLTLETYVELPHLLVTLRDDRKGAVDDALEAIGLHRRVAATLTRFLALP 239 Query: 236 NSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDR 295 +A +D + VP N + + LP + + + + + + Sbjct: 240 PVLAFSDAIATVPSRFAA--ASAPNCRLHEPPLALPRWTEQLVWRAGAEREPMIAWGLQL 297 Query: 296 LNES 299 + + Sbjct: 298 IRSA 301 >UniRef50_A7JRS0 Possible LysR family transcriptional regulator n=3 Tax=Mannheimia haemolytica RepID=A7JRS0_PASHA Length = 302 Score = 290 bits (744), Expect = 4e-77, Method: Composition-based stats. Identities = 55/297 (18%), Positives = 112/297 (37%), Gaps = 7/297 (2%) Query: 4 LYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKG 63 + D++ D NLL F + ++S+AA+ L IT A+S L RLR FNDPLF+R G Sbjct: 1 MSDIRTLDFNLLKAFVVLLDECNVSRAAQRLSITQPAMSGILNRLRESFNDPLFVRVQHG 60 Query: 64 IAPTTTGLNLHHHLEKNLRGLEQTINI--VNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 + PT L L L+ + + + L I + + Sbjct: 61 MQPTDRALQLGQTARNILQDISSMLQPPILEPEHLNMTLRIAAMDYVQQIIALP-LILRL 119 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 + + ++ + + +N + L +K DL + +S + L+ R S H Sbjct: 120 RRLAPNVKVALLPVQGQNIKTLFEQKKIDLALVSRQHLSTDTLKTVLYEERYVCAMSKTH 179 Query: 182 PRITDNSTYEQIMAEEFTQLIS-KSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAV 240 P + +Q F L + + + + RK+ + + + + Sbjct: 180 PMAQTPLSLDQFCNLPFAMLSYNGGEFSGATDLALQKIGLQRKVMVSVNHISLLPQLLQG 239 Query: 241 TDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLN 297 +DL+ ++P L + N+ + + +++++ + + + L Sbjct: 240 SDLVAVLPERLAKTL---PNVYLQPPPIEVEGFTMMMAWHERTEQDTAHRWLREVLQ 293 >UniRef50_A1U8Q8 Transcriptional regulator, LysR family n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1U8Q8_MARAV Length = 312 Score = 290 bits (743), Expect = 4e-77, Method: Composition-based stats. Identities = 53/297 (17%), Positives = 117/297 (39%), Gaps = 9/297 (3%) Query: 9 KFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTT 68 +DLNLL F +Y ++++A E L+++ +VS +L RLR F DPLFIR + + PT Sbjct: 4 NYDLNLLRTFHALYLEQNVTRAGERLHLSQPSVSAALGRLRELFKDPLFIRDRQRMRPTE 63 Query: 69 TGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSS 125 T +L +E L L+ I + + +++F I L LR+ + Sbjct: 64 TADHLFPVIEAALTDLDGLITSERDFSPATEQRHFEIAANDYFEVLILPALASVLREQAP 123 Query: 126 VEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRIT 185 I +S + +E ++ DL + +++ + + N HP + Sbjct: 124 -GITLQVRRLSQDMSEAGIMSGTTDLAFGRQVDPPDNLVVREVILEGIECLVGNEHPLLE 182 Query: 186 -----DNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAV 240 T + + + I +++ + + RK++ + + + + Sbjct: 183 RLKGNGQMTRDDFERYAHVLIQPHTRLKSGIFKQLESQNLKRKVALAVTYFMAVPALLEG 242 Query: 241 TDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLN 297 + L+ +P L +R + + + ++S++ + +++ Sbjct: 243 SSLIASLPTGLCQHFRRQFAVTPVAPPVAFDAFPFHLSWHHRYQKDPAHRWLREQII 299 >UniRef50_Q391Q9 Transcriptional regulator, LysR family n=1 Tax=Burkholderia sp. 383 RepID=Q391Q9_BURS3 Length = 322 Score = 290 bits (743), Expect = 4e-77, Method: Composition-based stats. Identities = 54/305 (17%), Positives = 112/305 (36%), Gaps = 8/305 (2%) Query: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 M ++ ++ DLNLL +F + ++++AAE L ++ SAVS +L+RLR D LF ++ Sbjct: 1 MKDV--FRQLDLNLLRVFAALMAEGNVTRAAERLALSQSAVSNALRRLRESLGDVLFEKT 58 Query: 61 GKGIAPTTTGLNLHHHLEKNLRGLEQTINI--VNKSELKKNFIIYGPQLISCSNNSMLIR 118 G+ PT L ++ + L+Q I+ + E + F I L Sbjct: 59 VSGVRPTARARELWSAVQPHFDALKQAISPDQFDPQEHRGTFTIAMSDYSVERIMPRLAH 118 Query: 119 CLRQDSSVEIECHDILMSAENAEELLVHRKADLVIT---QMPVISRSVICMPLHTIRNTL 175 + + + + S + + DL I S V + I + Sbjct: 119 FMGEHAP-SMRIELTPFSVADLPAMFDRGGVDLAIGGYLNDSSPSSGVRTHEMWPIHWSC 177 Query: 176 ICSNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTII 235 + HP T ++ +A + V + + R + ++ + Sbjct: 178 LMRKDHPLAKGPLTLKRFLAARHLDVGFSGMRVPVYDSLLSAHGLQRNLVLTLNAYSPAL 237 Query: 236 NSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDR 295 I +D +G++P L + L + +P+ + +++ ++ Sbjct: 238 AIIRESDFIGVLPTTLLDLSIHEKELVSRQPPVRMPARPYCVIWHQRWDSHPAHRWLRQT 297 Query: 296 LNESF 300 + F Sbjct: 298 IVSLF 302 >UniRef50_D2YJX0 Transcriptional regulator, LysR family n=1 Tax=Vibrio mimicus VM573 RepID=D2YJX0_VIBMI Length = 314 Score = 289 bits (742), Expect = 5e-77, Method: Composition-based stats. Identities = 78/301 (25%), Positives = 146/301 (48%), Gaps = 4/301 (1%) Query: 4 LYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKG 63 L L+ +DLNLL +F+ + S++KAA+ L +T +AVSQ+L RLR Q +PLFIR G+G Sbjct: 12 LIMLRDYDLNLLTVFDAVMTLGSVNKAADKLNMTSAAVSQNLSRLRDQVGEPLFIRQGRG 71 Query: 64 IAPTTTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCL 120 + PT LN+H H+ L + + + + + F+I G L+R + Sbjct: 72 LQPTQYALNMHKHVSAGLSAIRFGLETNACFDPATSTREFVIGGHGYFDLVVLPQLLRKI 131 Query: 121 RQ-DSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSN 179 + + + ++L R+ADL + +P+ S+I + ++ + Sbjct: 132 SEVAPHITVNLKPYEDDHFTPSQVLSEREADLFLASLPISHPSIITTQIAEEALVVVYAK 191 Query: 180 RHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIA 239 HPR+ + T++Q E+ T L S+ G +D+ RK+ ++ S+L ++ + + Sbjct: 192 NHPRLGETLTFQQFFDEKHTALTSRRFGHYLFSSLLDQALPARKVHYQSDSMLNLMATAS 251 Query: 240 VTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNES 299 VTDLL P L + + + L L L + + ++ ++K+ + +++ E Sbjct: 252 VTDLLCFTPKRLADMWAEKLGLHIQPLPFEMRPVPTFMCWHKAKQQDKGLIWLREQIEEV 311 Query: 300 F 300 F Sbjct: 312 F 312 >UniRef50_A3QJ07 Transcriptional regulator, LysR family n=25 Tax=Alteromonadales RepID=A3QJ07_SHELP Length = 330 Score = 289 bits (742), Expect = 6e-77, Method: Composition-based stats. Identities = 62/311 (19%), Positives = 118/311 (37%), Gaps = 18/311 (5%) Query: 2 ANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSG 61 NL +L + DLNLLV+ + + + S+++AA L+++ SA+S+SL RLR DPLFIR+ Sbjct: 1 MNLDNLARIDLNLLVMLQVLLEERSVTRAASRLHLSQSALSKSLNRLRDTLGDPLFIRTA 60 Query: 62 KGIAPTTTGLNLHHHLEKNLRGLEQTINI--VNKSELKKNFIIYGPQLISCSNNSMLIRC 119 G+ PT L L L+GL Q N + ++ F + + I Sbjct: 61 HGLKPTAHAALLGQQLPDMLQGLYQLTQPPSFNPASSRRQFSFAMVESAYETLIPYFIGP 120 Query: 120 LRQDSSVEIECHDILMSAENAEELLVHRKADLVIT----------QMPVISRSVICMPLH 169 L ++ + D + E + L + D IT + + + L Sbjct: 121 LLNNAP-NLRL-DSYLWTEKSLSSLQKGQIDFGITGRDINPQSDLIIDRLPEGIAHQTLF 178 Query: 170 TIRNTLICSNRHPRI----TDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKIS 225 T + HP + + + Q+ + + + + R +S Sbjct: 179 TDHQVCLVRQGHPMLPAIRNHQWDLDIYLEMSHVQVRCEGNEWWALDYFLAKSGQRRHLS 238 Query: 226 FRGSSLLTIINSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLN 285 + A +DL+ +P R L+E+ L S+ + +++ + + Sbjct: 239 TTVPDFYGAASVCAHSDLIFTLPSSFAAHARKLYALEELPLPFDFHSLAYVLLWHERNDD 298 Query: 286 NLVFSRFIDRL 296 + + Sbjct: 299 EPGHKWIRETI 309 >UniRef50_Q8XRG7 Probable transcriptional regulator transcription regulator protein n=1 Tax=Ralstonia solanacearum RepID=Q8XRG7_RALSO Length = 308 Score = 289 bits (741), Expect = 8e-77, Method: Composition-based stats. Identities = 61/295 (20%), Positives = 117/295 (39%), Gaps = 4/295 (1%) Query: 9 KFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTT 68 DLNLL +FE I++ +++ E L ++ AVS+ L RLR + D LF+R +G+ PT Sbjct: 13 HLDLNLLELFESIWRTRNLTATGERLGLSQPAVSRGLARLRETYGDELFVRHRRGVEPTA 72 Query: 69 TGLNLHHHLEKNLRGLEQTIN--IVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSV 126 L + L + +TI + +E + F + + L L + Sbjct: 73 FAQTLAEPVSAALAIVRRTIEKPTFSAAEDARRFRVALSDIGERYFLPRLAAWLADHAP- 131 Query: 127 EIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRITD 186 ++ + S E L + DL + +P + + V L + I HP I Sbjct: 132 QVSIDTVSASREELLTGLASGEIDLAVGFLPGLGKQVHEKRLFQEKFVYIARRDHPGIDG 191 Query: 187 NSTYEQIMAEEFTQLISKSAGV-DDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLG 245 Q+ A ++ + + ++ R S L+I +A +DL+ Sbjct: 192 RLQASQLRALPHVVGSPHGTQHAAAVEKVLTGPRVRAVVAMRVGSFLSIGPIVADSDLVA 251 Query: 246 IVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 +VP L + + L+ I PS ++ + +++ + + ++ F Sbjct: 252 VVPSNLAALVSEHVGLQLIAPPVRFPSFEVSMVWHRRFHGDPGGAWLRGVFSQLF 306 >UniRef50_Q2BJ61 Transcriptional regulator, LysR family protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BJ61_9GAMM Length = 302 Score = 289 bits (741), Expect = 9e-77, Method: Composition-based stats. Identities = 60/302 (19%), Positives = 116/302 (38%), Gaps = 8/302 (2%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 +L+ DLNLLV+ + + +SKAAE L ++ AVS++LQRLR DP+ +R+G G Sbjct: 1 MNLRSVDLNLLVVLQALIDEQHVSKAAERLNMSQPAVSRALQRLRTTLQDPILVRTGSGY 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTINI--VNKSELKKNFIIYGPQLISCSNNSMLIRCLRQ 122 + + L L L ++ + + + + + G L +IR LR+ Sbjct: 61 DLSARAVVLREQLSHVLHEVQAIMQPEQFDPMQAEGVLKLTGLDLELILLMPDVIRMLRE 120 Query: 123 DSSVEIECHDILMSAENAEELLVHRKADLVIT--QMPVISRSVICMPLHTIRNTLICSNR 180 + + + E+ ELL IT + + + + Sbjct: 121 KAP-NLRVEVVPQLPEH-FELLERGDVHFTITGLFPQTHHDQYRRIEIARTGHVCVMDRD 178 Query: 181 HPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAV 240 +P + + + G + + E RK+ R ++ +++ Sbjct: 179 NPLAKGELSLQDYANASHGLVSITGKGPGMMDDALGEFGYKRKVMLRLANFMSVAQFCQQ 238 Query: 241 TDLLGIVPYELYNSYRDFLNLKEIKLE--HPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 +DL+ +P + +L L LP + LY+ ++ ++ + S L E Sbjct: 239 SDLIFTLPKIMATHLAQGTSLVLRPLPKEFALPEVVLYMYWHDRYHHDPMCSWVRAELAE 298 Query: 299 SF 300 F Sbjct: 299 IF 300 >UniRef50_B6JAE3 MexT protein n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JAE3_OLICO Length = 311 Score = 289 bits (740), Expect = 1e-76, Method: Composition-based stats. Identities = 56/305 (18%), Positives = 111/305 (36%), Gaps = 9/305 (2%) Query: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 + + +L + DLNLLV+F+ I S + AA L ++ AVS +L RLR DPLF+R Sbjct: 8 LMHQKNLARLDLNLLVVFDAIASARSTTLAATQLSLSQPAVSHALSRLRRLIGDPLFVRG 67 Query: 61 GKGIAPTTTGLNLHHHLEKNLRGLEQTI--NIVNKSELKKNFIIYGPQLISCSNNSMLIR 118 T + + L + + + +E ++ F I + L+R Sbjct: 68 RGRFVLTPRAEGMVLQVRDILNAVGVVLANAPFDPAENERTFRIAASDYTMLTIMPTLVR 127 Query: 119 CLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICS 178 L + S + + ++ L D + + MPL + Sbjct: 128 TLHRASP-RAKLEVFSVGSQTI-AQLESNDLDCTFWALKPPGAPYVTMPLFRESSKGFLD 185 Query: 179 NRHPRIT----DNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTI 234 RHP T + + + + + + + R I SS + Sbjct: 186 RRHPLAKPANRGRLTLDDYVGYPHVIAKFRDSNPSPVDVALAAVGRKRTIGLASSSFIGN 245 Query: 235 INSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFID 294 I +++ T+L+ +P L +S + LK L + + +++ + + Sbjct: 246 ITALSGTNLIATLPSRL-SSIAESYGLKSFDLPIRIEDYTYSLVWHQRTDADPACIWLRK 304 Query: 295 RLNES 299 + ++ Sbjct: 305 VIAQT 309 >UniRef50_B7RV99 Transcriptional regulator, LysR family protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RV99_9GAMM Length = 303 Score = 288 bits (738), Expect = 2e-76, Method: Composition-based stats. Identities = 63/299 (21%), Positives = 127/299 (42%), Gaps = 8/299 (2%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 L K DLNL V+F+ +Y+ S+++ A++L++T AVS +L RLR F+D LF+RS +G+ Sbjct: 1 MRLDKVDLNLFVVFDALYRERSVTRVAQALHLTQPAVSNALSRLRQSFDDQLFVRSPRGM 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 PT + ++K L L++T + + F + + L L Sbjct: 61 QPTPVAEAISVDVQKALGLLQKTTLSGQRFDPGSAEMTFRLGMSDVAQNMVLPGLHNALA 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 Q + + + +A L DL++ V +R + + L ++ + + H Sbjct: 121 QLAP-GVTIEAYYLDRASAVAQLKSGDLDLLLDAPQVNARELGQLHLGSLLYRVAMAKAH 179 Query: 182 PRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVT 241 P + +Q +A + + ++ G + + + RK+ R A + Sbjct: 180 PLAQVDLDIDQYLAAKHVHVSARPRGRGQVDLALHAIGHRRKVVVRVQQYAVAAAITAQS 239 Query: 242 DLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 DLL P + + L ++ + S+ L + +++S+ + + L + F Sbjct: 240 DLLWTAPGSVIDH----PELHVVETPFQVESLVLNLYWHRSAAEDPANAWMRKMLAQQF 294 >UniRef50_A5F4D9 Transcriptional regulator, LysR family n=68 Tax=Gammaproteobacteria RepID=A5F4D9_VIBC3 Length = 327 Score = 288 bits (738), Expect = 2e-76, Method: Composition-based stats. Identities = 57/310 (18%), Positives = 111/310 (35%), Gaps = 16/310 (5%) Query: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 + + L + DLNLLV + + + LS+++AA L ++ SAVS+SL +LR QF+DPLF+R+ Sbjct: 14 LMQIEKLARIDLNLLVCLKVLIEELSVTRAAARLCLSQSAVSKSLAKLREQFDDPLFVRT 73 Query: 61 GKGIAPTTTGLNLHHHLEKNLRGLEQTINI--VNKSELKKNFIIYGPQLISCSNNS-MLI 117 G+ T L L L+ + LE + + F I + + L Sbjct: 74 SYGLNATPKALFLKPKLDVLVNQLELLTQPAHFSPQSSEYRFQIAAVESVYPLIMPYFLP 133 Query: 118 RCLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPV----------ISRSVICMP 167 R + I H E L + D +T + + Sbjct: 134 TIFRHGPHLSISTH---AWTEQTFRKLQVGELDFGLTGKDIDINDAKLTLLPPADICEQE 190 Query: 168 LHTIRNTLICSNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFR 227 ++ + HP + + + Q+ + + + R I+ Sbjct: 191 IYRDNQRCVVRRGHPVLQYDWNLSSYLNLRHVQVRCDGNDRWLLDYRLADLGYERDIAIT 250 Query: 228 GSSLLTIINSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNL 287 + + TD + P + ++L E+ L P + + +++ N+ Sbjct: 251 VPDFNSAASLCTYTDFIFTAPSHFTHWVAKQMDLVELPLPMEFPPMAYTLFWHRERENDP 310 Query: 288 VFSRFIDRLN 297 + + Sbjct: 311 ALRWLRELIQ 320 >UniRef50_Q7MFJ9 Transcriptional regulator n=28 Tax=Vibrio RepID=Q7MFJ9_VIBVY Length = 314 Score = 288 bits (738), Expect = 2e-76, Method: Composition-based stats. Identities = 59/297 (19%), Positives = 111/297 (37%), Gaps = 3/297 (1%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 +L+ DLNLL I E + H IS+AA++L ++ AVS++L RLR QF DPL ++ + Sbjct: 6 INLRSIDLNLLTILEKLLIHKHISQAAQALNMSQPAVSRALMRLREQFGDPLLVKVNREY 65 Query: 65 APTTTGLNLHHHLEKNLRGLEQTI--NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQ 122 T G L LE +L + Q + + + + F I L+ +Q Sbjct: 66 RLTAKGEYLRRELESSLNTIRQMLVDDAFDPLQYAGVFTIGALDFEMMMIVPKLLARFQQ 125 Query: 123 DSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHP 182 + +++ + +A + + ADL++ +V L ++ H Sbjct: 126 RAP-KLKLQIVPYNAYMPLHDYLEKVADLLLYSTDDSPTNVFKQRLFNDNYAVVMCQNHV 184 Query: 183 RITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTD 242 T E+ + G DI E+ R R++ + + TD Sbjct: 185 LANQPMTLERYCRSRHVIVSGNGLGKTDIDHELKRRNQQREVVASLPHFSMVPELLINTD 244 Query: 243 LLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNES 299 L+ +P L + + +L ++ ++ +N + Sbjct: 245 LIATLPRRLVSHLSHRYEITVAELPFYTADFQVEQFWHLIHHSNPAHQWVRQEIKNM 301 >UniRef50_B4E7M9 LysR family regulatory protein n=1 Tax=Burkholderia cenocepacia J2315 RepID=B4E7M9_BURCJ Length = 299 Score = 287 bits (737), Expect = 2e-76, Method: Composition-based stats. Identities = 63/296 (21%), Positives = 115/296 (38%), Gaps = 7/296 (2%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS--GKGI 64 +KK D+ LLV + + + ++++AA L I+ A+S L RLR +DPL + + G+G+ Sbjct: 1 MKKHDMGLLVSLDVLLEEANVTRAARRLAISQPALSAQLARLRQVLDDPLLVPAERGRGM 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 T L L + L LE + + S K++F I + + LI C+R Sbjct: 61 RLTPRAAQLKSPLHELLTRLEDLVEAPYAFDPSTAKRDFTIALNDNAAMTIGLDLIECIR 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 + S I + + + +L + DLVI + + L R + H Sbjct: 121 KQSYAGIRLAMLQIPRDEVLDLAARGRIDLVIGTRAFMPPGLRTHDLVYDRFQVAQRKGH 180 Query: 182 PRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVT 241 PR T T EQ A E + + + I + E R + + + T Sbjct: 181 PRGTAAMTLEQYCAYEHVLVSTNGSYHSGIDDFLAELGHYRHTTVSVQYYTAVPPILERT 240 Query: 242 DLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLN 297 + L +P + + + L +L + ++ +L ++L Sbjct: 241 NCLATLPERFLHRFDHM--IDRFDLPFAFDPFQLQVGWHPRFDEDLGHQWLREQLI 294 >UniRef50_Q88I06 Nodulation protein d1 n=4 Tax=Gammaproteobacteria RepID=Q88I06_PSEPK Length = 312 Score = 287 bits (737), Expect = 2e-76, Method: Composition-based stats. Identities = 56/299 (18%), Positives = 130/299 (43%), Gaps = 6/299 (2%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 DLNLLV + + + +I++AAE L++T SA S L RLR F D L ++ G+ + Sbjct: 1 MRFHHLDLNLLVALDILLEEQNITRAAERLHMTQSATSGVLGRLRTFFEDELLVQVGRKM 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 PT L L + + L + +I + + K++F + + + +I+ + Sbjct: 61 QPTPYALELAKPVREVLLTIRASITAKPVFDPAASKRHFRLVASDYLISVVFAQVIQKIH 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 Q++ +I +++ +++ ELL+ + D++I + L + + + Sbjct: 121 QEAP-QITF-EMIGPGDSSAELLMRGEVDMMIVPERYLIEGHPAQLLFEEDHVCVVWRDN 178 Query: 182 PRITDNSTYEQIMAEEFTQLISKSAGV-DDIQMEIDERFMNRKISFRGSSLLTIINSIAV 240 P + ++ T EQ M + +++ NR++ + T+ + Sbjct: 179 PEVGEHLTLEQYMQMGHISVGFGRNRHLSIEDWFMNQYGFNRRLEVITNDFNTLPQLLVG 238 Query: 241 TDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNES 299 T + + L Y +L L+ + +P ++ ++ +++S + + +R+++ Sbjct: 239 TVRVATMHRRLAELYAGYLPLRLLPPPVKIPVMREFMLWHRSMDGDPMHRWLRERISDV 297 >UniRef50_Q687Z9 LysR-type activator n=1 Tax=Sphingopyxis macrogoltabida RepID=Q687Z9_9SPHN Length = 318 Score = 287 bits (737), Expect = 3e-76, Method: Composition-based stats. Identities = 51/289 (17%), Positives = 108/289 (37%), Gaps = 5/289 (1%) Query: 16 VIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTTGLNLHH 75 IF + +S AAE+L IT VS +L+RLR +D LF R+ G+ PT + + Sbjct: 26 RIFHRMMVDRKVSAAAEALGITQPGVSNALKRLRDITDDELFTRAPGGMEPTAFAIQIAE 85 Query: 76 HLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSVEIECHD 132 + L ++ + ++ F + + ++ + + + Sbjct: 86 PISYALAMVDAAFTQPTDFKPASDRRLFRLGLTDIGEAYLLPKILARTAEIAP-HVSFTT 144 Query: 133 ILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRITD-NSTYE 191 I E + DL I P + + + L ++ + HP T Sbjct: 145 IRPPKSEIREEMEVGSLDLAIDVFPNMKGNFVHRRLLKEKHVICMRKDHPLANKAEWTMA 204 Query: 192 QIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLGIVPYEL 251 +A+E +I++ G DI + + ++R I L++ + T+L+ +P + Sbjct: 205 DYIAQEHVVVIAQGTGHGDIDALLARKGISRNIRLMLPHFLSLGPVMHATNLVATLPEDA 264 Query: 252 YNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 + L + LP + + + +++ + + + E F Sbjct: 265 ALLLEEPYELISLPFPGILPIVHVDVFWHRRLHRDPANVWLRNLVYELF 313 >UniRef50_D1SW87 Transcriptional regulator, LysR family n=1 Tax=Acidovorax avenae subsp. avenae ATCC 19860 RepID=D1SW87_9BURK Length = 330 Score = 287 bits (736), Expect = 3e-76, Method: Composition-based stats. Identities = 56/303 (18%), Positives = 118/303 (38%), Gaps = 8/303 (2%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 ++ DLNL ++F+ I+ S++ A E L +T SAVS +L+R+R +FND LF+RS +G+ Sbjct: 1 MNIHSIDLNLFLVFQAIFATRSVTLAGERLGMTQSAVSNALKRMRERFNDVLFVRSAEGM 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 PT L +E+ L Q ++ + F I + L+ R Sbjct: 61 VPTPLAERLIGPVEEGLAAFSQAVDQGRTFEAGTSGRLFRIAVNDIGQLVMMPRLLSLAR 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 + I + + A + ++H + D+ + + S L ++ + Sbjct: 121 GLAP-GIRFETVDVPRAEARQRMLHGQIDVALGSWEPMGPSFYQQRLFDETFVVLVARAS 179 Query: 182 PR-ITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFM--NRKISFRGSSLLTIINSI 238 P D+ + +A E + +Q ++ R++ + L + + + Sbjct: 180 PLGTRDSIALDDYLAAEHIAYRPRGTTDHQLQQALERVGALDRRRVVLTAAHSLGLSSIV 239 Query: 239 AVTDLLGIVPYELYNSY-RDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLN 297 A T L+ P L + +L + + ++ +++ + + + Sbjct: 240 ATTGLVLTAPQRLAQAMVASRSDLHILNAPFEVAPFEISQQWHERFHQDSGNRWLRELMF 299 Query: 298 ESF 300 F Sbjct: 300 GLF 302 >UniRef50_A9FJR3 Transcriptional regulator, LysR family n=2 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FJR3_SORC5 Length = 306 Score = 287 bits (736), Expect = 3e-76, Method: Composition-based stats. Identities = 54/295 (18%), Positives = 115/295 (38%), Gaps = 3/295 (1%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 L+ DLNLL + + + ++++AAE L +T AVS +L RLR FND L +R GK +AP Sbjct: 9 LRAVDLNLLTVLDAVLTERNVTRAAERLGMTQPAVSSALNRLRLLFNDDLIVRRGKEMAP 68 Query: 67 TTTGLNLHHHLEKNLRGLEQTINIVNKS--ELKKNFIIYGPQLISCSNNSMLIRCLRQDS 124 T L L + K L ++ ++ + F + + ++ L Q Sbjct: 69 TPRALALAGPIRKALDLIQASLAHTGAFDCTASRTFRLGITDIGEALLLPRFLQWLEQL- 127 Query: 125 SVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRI 184 + + + + K +LV+ + + + + + HP + Sbjct: 128 GARVRLDFCREPGTSLQNEMRLGKIELVLDHIAIPGEEFRRTRVLDLEFVTLVRQDHPTV 187 Query: 185 TDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLL 244 + T ++ MA E + + + + R + + L++ ++ ++L+ Sbjct: 188 GPSLTLDEYMALEHVIIEPREGQTNLAEQIQAAVGRARCVRVQVPRYLSMPFIVSQSNLV 247 Query: 245 GIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNES 299 +P L + ++ + P+ I L++ ++ + L E Sbjct: 248 CTLPLPLARLFEQHFPVRVVSCPLPIQPIPLFMMWHACQDGDPAHEWLRRSLIEL 302 >UniRef50_B9J825 Nod transcriptional regulator protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9J825_AGRRK Length = 333 Score = 287 bits (736), Expect = 3e-76, Method: Composition-based stats. Identities = 62/302 (20%), Positives = 114/302 (37%), Gaps = 4/302 (1%) Query: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 M N L+K DLNLL+ F + Q ++S+AAE L + +S +L+RLR +D LF+R Sbjct: 3 MMNDAALRKIDLNLLLAFSVLMQERNVSRAAERLLLGQPGLSAALRRLRETLDDELFVRV 62 Query: 61 GKGIAPTTTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLI 117 G+G+ PT L++ +E L G+E+ I + S + F + + L Sbjct: 63 GRGLQPTARALSIAPAIEDALSGIERAIRPPAAFDPSSWQGEFRVGMCDNLESDFFGPLA 122 Query: 118 RCLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLIC 177 LR + + A LL D I+ + I PL + I Sbjct: 123 ARLRGLAP-NARLTGVAFDKREAGRLLDEGAYDFSISVHDEPASWHIRAPLFNQASACIY 181 Query: 178 SNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINS 237 RH R+ E + + + + ++ + + +R++ + + Sbjct: 182 DPRHIRLDAPLGLEDFAKADHITVSLEGNTLTNVDLALARVGYHRQVVATVPRYSALPMA 241 Query: 238 IAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLN 297 + + +P + NL + LP+ + + Y + + F Sbjct: 242 LRAMPAIATIPESIARCMAQLHNLTVSQPPLDLPADPVTMLYRRVDQADSRAVWFRRLFV 301 Query: 298 ES 299 E Sbjct: 302 EV 303 >UniRef50_C4I668 Transcriptional regulator, LysR family n=80 Tax=Proteobacteria RepID=C4I668_BURPS Length = 297 Score = 287 bits (736), Expect = 3e-76, Method: Composition-based stats. Identities = 44/285 (15%), Positives = 103/285 (36%), Gaps = 8/285 (2%) Query: 17 IFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTTGLNLHHH 76 + + ++++AA L ++ +VS L +LR F DPL + +G+ PT L Sbjct: 14 TLDALLSEHNVTRAAARLNLSQPSVSIHLAKLRDIFGDPLLLPGPRGMRPTARADELREP 73 Query: 77 LEKNLRGLEQTIN---IVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSVEIECHDI 133 L + L L + ++ + + + + + + LR + + Sbjct: 74 LRRALETLGRAVSPGAPFDPAASAHTWRVAASDYSESTVVLPALNGLRAAAPGT-RLAVV 132 Query: 134 LMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRITDNSTYEQI 193 + DL ++ L T R L+ HPR+ T Q Sbjct: 133 ETVPSRIAKQAEQGDIDLAFHITECAPGNLRHRALFTERYVLVGRAGHPRLKRRPTLAQF 192 Query: 194 MAEEFTQLISKSAG-VDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLGIVPYELY 252 + + G + + + R++ L +++++A +DL+ ++P L Sbjct: 193 CKLDHVIVSPDGGGFQGGTDQALAKLGLARRVVLSVPHFLFMMSAVANSDLVAMMPSRLV 252 Query: 253 NSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLN 297 D L+ ++ +P ++ + +++ S + + + Sbjct: 253 R---DSRALQVVEPPVDVPGFRMAMLWHERSHRDPAHQWLREHIA 294 >UniRef50_C5CZA2 Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus S110 RepID=C5CZA2_VARPS Length = 317 Score = 287 bits (736), Expect = 3e-76, Method: Composition-based stats. Identities = 57/303 (18%), Positives = 118/303 (38%), Gaps = 8/303 (2%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 ++ DLNL ++F+ IY S++ A + L +T SAVS +L+R+R +FND LF+RS G+ Sbjct: 1 MNINSIDLNLFLVFQAIYATRSVTLAGDRLGMTQSAVSNALKRMRERFNDALFVRSADGM 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 PT L +E+ + L Q ++ + F I + LI R Sbjct: 61 VPTPVAERLIAPIEEGIACLVQAVDQGRTFEPETSSRIFRIAVNDIGQLVMVPELISVAR 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 + + + +S A + ++H + D+ + + S L ++ S Sbjct: 121 GIAP-GVRFETVDVSVAEARQRMLHGQIDVALGSWEAMGPSFYQQRLFDETFVVLMSKAS 179 Query: 182 PR-ITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFM--NRKISFRGSSLLTIINSI 238 P + + +A E + +Q ++ R++ + L + + + Sbjct: 180 PLGTRERIELDDYLAAEHIAYRPQGTTDSQLQQTLERAGALDRRRVVLTAAHSLGLTSIV 239 Query: 239 AVTDLLGIVPYELYNSY-RDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLN 297 A + LL P L + +L + + ++ +++ + + + Sbjct: 240 ATSGLLLTAPARLAKAMVASRADLHSVDAPFEVRPFEIRQQWHERFHQDSGNRWLRELIF 299 Query: 298 ESF 300 F Sbjct: 300 GLF 302 >UniRef50_C0ZNV8 Putative LysR family transcriptional regulator n=1 Tax=Rhodococcus erythropolis PR4 RepID=C0ZNV8_RHOE4 Length = 298 Score = 287 bits (736), Expect = 3e-76, Method: Composition-based stats. Identities = 61/295 (20%), Positives = 122/295 (41%), Gaps = 6/295 (2%) Query: 9 KFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTT 68 DLNLL +F+ + S++ AAE L ++ A S++L RLR +DP+F+R+G+G+ PT Sbjct: 4 DMDLNLLRVFDALVAEGSVTGAAERLNLSIPATSRALGRLRRAMDDPIFVRAGRGLVPTP 63 Query: 69 TGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSS 125 L + L G + + +EL++ F+I + + S L+R ++ Sbjct: 64 FALRAAPQVRSLLEGAQGLLIDRKNFEPAELERTFVIRINEGTAASLTPALVRRFAAEAP 123 Query: 126 VEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRIT 185 + + + L + DL I P+ S V L+ + + S P Sbjct: 124 NAV--IRCVGEGNEDVDSLRNGSIDLDIGADPLPSSDVCSEILYREGHVGLVSKSSPLAR 181 Query: 186 -DNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLL 244 T Q+ + I + M R++ +S + A +DL+ Sbjct: 182 TAQPTLAQLCEHPHVSTSRRGRTHGPIDDALSAVGMRRRVIAVVASPVAAALMAADSDLV 241 Query: 245 GIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNES 299 +VP L + L++ + LP++ ++ ++ ++ +++ E+ Sbjct: 242 ALVPERLARYFAARLDVAWFAVPTELPAVTIHQQWHGRLDHDPAHKWLREQVREA 296 >UniRef50_Q46T42 Regulatory protein, LysR:LysR, substrate-binding n=2 Tax=Burkholderiaceae RepID=Q46T42_RALEJ Length = 330 Score = 287 bits (735), Expect = 4e-76, Method: Composition-based stats. Identities = 60/300 (20%), Positives = 120/300 (40%), Gaps = 5/300 (1%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 FD NLL +F+ + + S+++AA L +T SA+S +L RLR F+DPLF+++ G+ Sbjct: 1 MHTDAFDYNLLTVFDAMLRERSVTRAAAQLGLTQSAMSHALNRLREFFDDPLFVKTAAGM 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 PT L + + + + + + +++ F + + L++ LR Sbjct: 61 TPTIKAEALSETVLDVMTAMRTRVLPQASFDPATMQRTFTLCMTDMGELVFLPPLMKRLR 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 + + + + E LL ADL++ + S+ L I S ++ Sbjct: 121 VVAP-HCKLRTLQVPVPQIEGLLASGDADLLLGSVQTAPESLFRQQLFMHGFVTIVSTKN 179 Query: 182 PRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSI-AV 240 ++ D T EQ + + + + R I L+I + Sbjct: 180 RQVRDALTIEQFESMPHVTVSLAGRTSPSYDAAFESHGLRRNIYLHTPHFLSIPLLMEQQ 239 Query: 241 TDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 +L+ VP EL N + + ++ +K LP L ++ ++ + ++F Sbjct: 240 PELIATVPQELANVFSRYGIVRVVKPPVVLPPYALSQYWHPRFHHDPAIVWLRQLVKQTF 299 >UniRef50_B1J7P4 Transcriptional regulator, LysR family n=5 Tax=Pseudomonas RepID=B1J7P4_PSEPW Length = 314 Score = 287 bits (735), Expect = 4e-76, Method: Composition-based stats. Identities = 53/296 (17%), Positives = 108/296 (36%), Gaps = 5/296 (1%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 L L +C+ Q ++S AAE L ++ SA+S+ L LR F+DPL +R G+G Sbjct: 5 FASLSLAHLRTLDCLLQLKNLSHAAERLGVSQSALSRQLAHLREAFDDPLLVRQGRGYVL 64 Query: 67 TTTGLNLHHHLEKNLRGLEQTINI--VNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDS 124 + G L L + L L+ + + ++ F + ++ +L+ L Q++ Sbjct: 65 SEYGQALVEPLRQVLEELQALRQPAAFDPARCERRFCLAASDYVAEHMLPLLVAALEQEA 124 Query: 125 SVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRI 184 + D LL + DL T ++ L R + HP Sbjct: 125 P-GVSI-DYRTWQAGQYALLASGEIDLATTLFDESPANLHGRLLGEDRAVCLMRRDHPLT 182 Query: 185 T-DNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDL 243 + + + +A + ++ I + + + R+IS + + + Sbjct: 183 ACEVLSQDDYLAFKHVRISGGGDKDSFIDRHLRTQGLQRRISLEVPFFSATVQVVGNSQA 242 Query: 244 LGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNES 299 L VP + L L + + ++ +++ + +R+ E Sbjct: 243 LATVPEHIARQLCRLHGLAWRPLGFVEHTQRYWVVWHQRLQASAEHRWLRNRVFEL 298 >UniRef50_Q081Z6 Transcriptional regulator, LysR family n=1 Tax=Shewanella frigidimarina NCIMB 400 RepID=Q081Z6_SHEFN Length = 303 Score = 286 bits (734), Expect = 5e-76, Method: Composition-based stats. Identities = 66/292 (22%), Positives = 121/292 (41%), Gaps = 3/292 (1%) Query: 9 KFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTT 68 K DLNL V+F+ IY +I+KAA L ++ AVS SL +LR F+D LFIR G + PT Sbjct: 2 KIDLNLFVVFDAIYCEGNITKAASVLNLSQPAVSHSLGKLRTHFDDALFIRQGNEMRPTP 61 Query: 69 TGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSS 125 N+ + + L L+ + +K+F + + +L + L +S Sbjct: 62 VAKNVIDDVREALHQLQVCLVQSRQFEPLTSRKSFSLSLHGSLEPYYLPILQQSLSLESP 121 Query: 126 VEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRIT 185 + + E L DL I + +S +++ L + ++ HP + Sbjct: 122 SINLSSNKRVRRTELENKLASGDIDLAIDTLIPVSNNIMHTQLELDQLVVVARKNHPAMN 181 Query: 186 DNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLG 245 + + + + S+S G E+ ++RKIS R L+ I D+L Sbjct: 182 PDLDLATYLKLDHVLVSSRSTGPSLEDFELSRIGLHRKISLRCQHALSACRVILNNDMLL 241 Query: 246 IVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLN 297 +P Y L++ + LP I +++ ++ + +++ Sbjct: 242 TLPKTAAAMYSKMLDIDIHPMPVELPDIGVHLYWHVNVDKEPANKWLRNKMI 293 >UniRef50_B7CP85 Transcriptional regulator, LysR family protein n=1 Tax=Burkholderia pseudomallei 576 RepID=B7CP85_BURPS Length = 305 Score = 286 bits (734), Expect = 5e-76, Method: Composition-based stats. Identities = 59/301 (19%), Positives = 121/301 (40%), Gaps = 7/301 (2%) Query: 2 ANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSG 61 ++ ++ DLNLL+ + + +SKAA+ +++ A+S+ LQRLR F D L +R+ Sbjct: 1 MHMKHIRGADLNLLLAAFVLLEERQVSKAADRYHLSQPAMSRMLQRLRDTFGDELLVRTR 60 Query: 62 KGIAPTTTGLNLHHHLEKNLRGLEQTIN--IVNKSELKKNFIIYGPQLISCSNNSMLIRC 119 G PT G + H L + L L+ + + + +E + F + + L Sbjct: 61 GGFEPTVRGRYILHELGELLPRLDALLRGGLFDPTEAEDTFRVACTDYATTILGPRLFER 120 Query: 120 -LRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICS 178 R+ +V ++ + ++A E + H + DLV+ + ++ L + S Sbjct: 121 VFREAPNVSMDV---VAWHDHAFEAIEHGRLDLVLWPNE-VPDTLYSETLFEDDFVCMMS 176 Query: 179 NRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSI 238 + HP + + ++ + + + R R S I +I Sbjct: 177 SDHPSGDGPLVLRDYLRFPHAVVSVLGGKQTIVEQRLHDMGVRRAAGLRVSYFSGAITAI 236 Query: 239 AVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 A T L+ VP L YRD N++ ++ + + ++ + +L + Sbjct: 237 ARTALIATVPRRLAMLYRDRANIRIVEAPAMFGKLSYKMVWHPRADGDLALQWLRQTIRA 296 Query: 299 S 299 + Sbjct: 297 A 297 >UniRef50_Q4KHX1 Transcriptional regulator, LysR family n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4KHX1_PSEF5 Length = 308 Score = 286 bits (734), Expect = 6e-76, Method: Composition-based stats. Identities = 50/296 (16%), Positives = 112/296 (37%), Gaps = 4/296 (1%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 L+ DLNLLV+ + + +++ A L+++ A+S SL +LR +DP+ IR G + Sbjct: 6 LRNIDLNLLVVLDALLTEKHVTRTALRLHLSQPAISHSLSKLRGLLDDPILIRRGSELVL 65 Query: 67 TTTGLNLHHHLEKNLRGLEQTIN---IVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQD 123 ++ N+ L + L +E + + ++ F + + L+ LR+D Sbjct: 66 SSLAQNIQQPLREILGQIETLFGKSIDFDPASSQRIFTLAMSDYGAALVLPNLMVRLRRD 125 Query: 124 SSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPR 183 + + E + K DL + P +S + L + + R Sbjct: 126 APNT-TLVVTQDTRHGMFEQVSQGKIDLALGVFPNLSGDISTEVLFEETFSCLLDRRTLP 184 Query: 184 ITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDL 243 + +A + + ++ + + + R+I+ T + I TDL Sbjct: 185 ADGTLDLDSYLARPHILVSMDGSANGEVDSLLRDEGLQRRIAVSVPHWRTAPSMIHNTDL 244 Query: 244 LGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNES 299 + V + +L +++ P+P +++ N +++ + Sbjct: 245 ILTVATRTLDEALLNQDLIQLRPPLPIPPFPFVQIWHQRFDNEPAHVWLREQVKQV 300 >UniRef50_P52679 PCP degradation transcriptional activation protein n=1 Tax=Sphingobium chlorophenolicum RepID=PCPR_SPHCR Length = 307 Score = 286 bits (734), Expect = 6e-76, Method: Composition-based stats. Identities = 53/299 (17%), Positives = 107/299 (35%), Gaps = 6/299 (2%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 + L L++F+ +Y+H S KAA +L + +S+ L +LR F+DPLF+R+ G+ Sbjct: 1 MNDSVLPLGHLMVFDALYRHGSAGKAAHALSMPQPTLSRWLAQLRTHFDDPLFVRTRSGM 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 PT H+ + + Q + + +NF I L L Sbjct: 61 EPTPLAARAAPHIAEMIAIYRQHVRSELRFDPGTSNRNFRIAASDFGQALMLPRLYATLE 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 + + ++ + + E L D+ P +S + L + H Sbjct: 121 ETAP-QVRVTGVNLRHGPLVEELESGSIDIAFGGFPTLSAGIKTQTLFREEYVCVMRQSH 179 Query: 182 PRITDNSTYEQIMAEEFTQLISK--SAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIA 239 P +T E + + + + ++ + E I F + L Sbjct: 180 PALTHGLDLEAFRQCRHIIVTAHEFNHVHEQVEARLLELLPPESIRFTTENFLVSAVIAE 239 Query: 240 VTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 TD++ +P L + + L + LPSI++ +++ + + + Sbjct: 240 ETDVILTIPSRLARWFANRGGLTIFPVPIELPSIEVKQYWHERYDKDPGNIWLRRVIAK 298 >UniRef50_Q0K3U9 Transcriptional regulator, LysR-family n=2 Tax=Betaproteobacteria RepID=Q0K3U9_RALEH Length = 311 Score = 286 bits (734), Expect = 6e-76, Method: Composition-based stats. Identities = 50/290 (17%), Positives = 104/290 (35%), Gaps = 4/290 (1%) Query: 6 DLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIA 65 + DLNL+V + + S+S+AA L++ AVS +L RLR F+DPL +R+ G+ Sbjct: 7 HFRGVDLNLMVTLTVLLRERSVSRAAARLHLGQPAVSGALARLREMFDDPLLVRTAHGME 66 Query: 66 PTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQ 122 PT L L L L +E + + + F++ P + ++ L Sbjct: 67 PTERALELERRLLPALGEIEAALLQRRDFDPLTSDRTFVVGMPDWVELWLAPRILPSLST 126 Query: 123 DSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHP 182 + + + E+L + DL I + T+ + Sbjct: 127 CAP-GVRLAIVPTDPFRGTEMLERNEMDLGIGPFAKGAAWRRERAWQTMGFRCVYGAAPL 185 Query: 183 RITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTD 242 + + + + + A + + R + + + ++ + T Sbjct: 186 DACQILSLQDYLRFPHVLVSYRGAFDSTADTWLATQGQARDVRYSSARFASVPAILKGTA 245 Query: 243 LLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRF 292 L VP L + + L+++ P+P + ++ + N+ Sbjct: 246 ALATVPAVLADQWCATEGLRQLPCPVPMPDFTVTAVWSAARDNDAGLMWL 295 >UniRef50_B9B1S8 Transcriptional regulator, LysR family n=1 Tax=Burkholderia multivorans CGD1 RepID=B9B1S8_9BURK Length = 319 Score = 286 bits (734), Expect = 6e-76, Method: Composition-based stats. Identities = 64/300 (21%), Positives = 113/300 (37%), Gaps = 7/300 (2%) Query: 4 LYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKG 63 + + DLNLL +F+ I + S++KA E L ++ AVS SL RLR F+DPLF+R+ G Sbjct: 14 MTSVDHLDLNLLRVFQAIVEERSLTKAGERLALSQPAVSYSLGRLRTLFDDPLFVRTRAG 73 Query: 64 IAPTTTGLNLHHHLEKNLRGLEQTIN---IVNKSELKKNFIIYGPQLISCSNNSMLIRCL 120 + PT L L + K L + + + + + F + + + R L Sbjct: 74 MQPTPVALELAGIVGKALDMVRVALRYAERFDPATSTRTFRLSLSDAGEMAYLPAICRAL 133 Query: 121 RQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLIC--S 178 R+ + + M E EE L + D I +P + L + Sbjct: 134 RERAP-RVTLSVQPMPVEAIEEALRASRLDFAIGNLPELMPRTRHQLLFEETYVCMTGRR 192 Query: 179 NRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSI 238 P T EQ + + S + + + + R ++ + + + Sbjct: 193 RGLP-SGTTLTLEQFVRAAHVNVKSVEHSHHALDDALRAQGVGRNVALEVPHFVALPGVL 251 Query: 239 AVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 VTDL +P L + L PLP + + +++ + + L E Sbjct: 252 QVTDLYATLPKRLAQILNRDNAFRLYALPVPLPPAPVTMHWHEHFHEDEGITWMRALLAE 311 >UniRef50_Q5LN55 Transcriptional regulator, LysR family n=4 Tax=Rhodobacterales RepID=Q5LN55_SILPO Length = 331 Score = 286 bits (733), Expect = 7e-76, Method: Composition-based stats. Identities = 55/306 (17%), Positives = 112/306 (36%), Gaps = 11/306 (3%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 + + FDLNLL + + + S ++A + L ++ AVS +L RLR DPLFIR G+ + Sbjct: 1 MNFRTFDLNLLRVLDALLSTRSTTRAGQQLGMSQPAVSAALSRLRHALGDPLFIRQGRQL 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTIN---IVNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 PT LH L L E + + + + G + L R L Sbjct: 61 VPTDYAGGLHAPLRDLLGQTEALLAGQPDFDPGAATDSLTLSGSDFYAELLMPRLARHLS 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 + + + + +N + + D+ I V LH+ + H Sbjct: 121 HVAP-GMRVQLVDLVPDNYVQSVGQSAVDMAILPATPTPDWVEERRLHSSHFLAVARADH 179 Query: 182 PRITDN-------STYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTI 234 P I + + + + + R+++ + Sbjct: 180 PEIASAAIAPGAVLPLDLFCSLQHALFSPEGKLHGLGDAALARIGRARQVTMTLPVFSGV 239 Query: 235 INSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFID 294 +N+++ +DL+ ++P++L S L L P+ +++ + ++K + D Sbjct: 240 LNAVSQSDLIALIPHQLAESVAPRLGLSLYHPPIPVGPVEIMMVWHKRASTAPAHRWLRD 299 Query: 295 RLNESF 300 ++ Sbjct: 300 QIAMLM 305 >UniRef50_A5WDE8 Transcriptional regulator, LysR family n=1 Tax=Psychrobacter sp. PRwf-1 RepID=A5WDE8_PSYWF Length = 302 Score = 286 bits (732), Expect = 8e-76, Method: Composition-based stats. Identities = 68/298 (22%), Positives = 117/298 (39%), Gaps = 6/298 (2%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 + D+ LL++F+ IYQ +ISKAA+ L I A S L +LR F+DPLF+R G + P Sbjct: 1 MFDIDVRLLLLFQAIYQQNTISKAAQKLDIGQPAASLGLNKLRQHFDDPLFVRVGNQMQP 60 Query: 67 TTTGLNLHHHLEKNLRGLEQTIN---IVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQD 123 T T NL + L+ + + + F I + LI+ L+Q Sbjct: 61 TQTAQNLFPLVNNALQHIRAVNDYTHHFEPKNSSRRFHISMTDISHMIIVPKLIKYLKQH 120 Query: 124 SSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPR 183 + DI + + + DL I +P + +++ HPR Sbjct: 121 APHT--KLDISAINSDTPSRMSSGEIDLAIGYIPHLEAGFFQQTFFEQHYSVVVRQDHPR 178 Query: 184 I-TDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTD 242 + + T E E+ +IS G ++ + R + R I+ + L + I TD Sbjct: 179 LTQNTLTLEAYQQEQHADVISSGTGHYLLEDHLRRRHIKRHIAITLPTYLGVGLIIQQTD 238 Query: 243 LLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 L+ +P +L L + L +P ++ +++ N F Sbjct: 239 LVATLPDKLAKLLLQENRLHTLPLPLDIPKYQVKQHWHERMHANPDNQWLRQVCYALF 296 >UniRef50_A9C385 Transcriptional regulator, LysR family n=2 Tax=cellular organisms RepID=A9C385_DELAS Length = 332 Score = 286 bits (732), Expect = 8e-76, Method: Composition-based stats. Identities = 67/298 (22%), Positives = 129/298 (43%), Gaps = 6/298 (2%) Query: 6 DLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIA 65 +L+ DLNLLVIFE + + S+ KAA L IT SAVS +L+RLR QFNDPL +R+ +G++ Sbjct: 16 NLRSIDLNLLVIFEALVEERSVGKAAARLGITSSAVSHALRRLRTQFNDPLLLRTAEGMS 75 Query: 66 PTTTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCLRQ 122 PT + L K +E I + + + ++NF + + L LR Sbjct: 76 PTPEAVRLARSFRKAFSEIESAIEVSKGFDPATARRNFHLRLSDYVGVLLLPQLCIHLRA 135 Query: 123 DSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHP 182 + I + + + ++ ++ S L + ++ HP Sbjct: 136 VAP-GISLSVQSFDGRQPSDRVEYEGVEIRLSVSRGRSVLSASRRLLDDQWMVLMRKDHP 194 Query: 183 RITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTD 242 T E+ + + ++ G + + ER + R++ F+ + L ++ I TD Sbjct: 195 AAASPLTLEKYLEQGHLKVT--GVGSSIVDELLAERGLARRVMFQVPTWLGMVPVIESTD 252 Query: 243 LLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 L+ +P +S N + P ++ + ++ + ++ F + +++ F Sbjct: 253 LVAAMPAHWMHSVLSGSNCVARPMPLPELALSIDAVWHPRNDHDAGHKWFRELIHQIF 310 >UniRef50_A0KH33 Transcriptional regulator, LysR family n=2 Tax=Aeromonas RepID=A0KH33_AERHH Length = 313 Score = 285 bits (731), Expect = 1e-75, Method: Composition-based stats. Identities = 47/291 (16%), Positives = 114/291 (39%), Gaps = 4/291 (1%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 + K +LNLL + + + +IS+AAE L+++ ++S+ L +LR++F D L +R G+ Sbjct: 1 MHKANLNLLPTLKVLLETRNISRAAELLHLSQPSISKQLGQLRSEFGDELLVREGQRWLL 60 Query: 67 TTTGLNLHHHLEKNLRGLEQTINI--VNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDS 124 T L L +L LE+ + S ++ F + ++ + L +++ Sbjct: 61 TPRAEALAAQLADSLGALERLYEAPGFDPSRCERVFRLASSDYVAQHILPDICAALAREA 120 Query: 125 SVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRI 184 + + + + L + D+V T ++ + + R ++ + HP Sbjct: 121 PLAA--LEYSLWDKRLLPQLWQSELDMVSTITELVPDQIRGLHQGEDRLVVLMGSHHPLA 178 Query: 185 TDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLL 244 + + + +A Q+ ++ + + ++R+ R + + TD L Sbjct: 179 GRSLSLDDYLAWPHLQVSGGGDKDSPVEQVLAPQGLSRRWFARVPFFQAAVEVLLRTDCL 238 Query: 245 GIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDR 295 P + L L + + ++ +++ + F + Sbjct: 239 LTTPAHIAWQLSCEHALHFCDLPFASRTQQYHLLWHQRHHQDPAHKWFREL 289 >UniRef50_A5F3E5 Transcriptional regulator, LysR family n=29 Tax=Vibrio RepID=A5F3E5_VIBC3 Length = 308 Score = 285 bits (731), Expect = 1e-75, Method: Composition-based stats. Identities = 78/301 (25%), Positives = 148/301 (49%), Gaps = 4/301 (1%) Query: 4 LYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKG 63 + L+ +DLNLL +F+ + + S+SKAA+ L +T +AVSQ+L RLR Q DPLFIR G+G Sbjct: 1 MIMLRDYDLNLLTVFDSVMKLGSVSKAADKLGMTSAAVSQNLSRLREQVGDPLFIRQGRG 60 Query: 64 IAPTTTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCL 120 + PT LN+H H+ + L + + + + K+ FII G L++ + Sbjct: 61 LQPTQYALNMHKHVAEGLSAIRFGLETDAGFDPATSKREFIIGGQGYFDLVVLPPLLQKI 120 Query: 121 RQ-DSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSN 179 + + ++L R+ADL + +P+ S++ + ++ + Sbjct: 121 SDIAPHITVNLKSYEDDHFTPSQVLSEREADLFLAALPISHPSIVTTQVAEEALVVVYAK 180 Query: 180 RHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIA 239 HPR+ ++EQ AE+ T L S+ G +D+ R++ ++ S+L ++ + + Sbjct: 181 NHPRLGSTLSFEQFFAEKHTALTSRRFGNYLFSSLVDQVLPARRVHYQSESMLNLMATAS 240 Query: 240 VTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNES 299 VTDLL P L + + + L L+ L + S+ ++ ++K+ + +++ Sbjct: 241 VTDLLCFTPKRLADMWAEKLGLQIQPLPFEIRSVPTFMCWHKAKQQDKGLIWLREQIEAI 300 Query: 300 F 300 Sbjct: 301 L 301 >UniRef50_D0RY94 Transcriptional regulator n=4 Tax=Acinetobacter RepID=D0RY94_ACICA Length = 311 Score = 285 bits (730), Expect = 1e-75, Method: Composition-based stats. Identities = 69/309 (22%), Positives = 130/309 (42%), Gaps = 10/309 (3%) Query: 1 MANLYD----LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPL 56 M + + L + DLNL +F IY+ ++++A+E L+++ AVS +L RLR FNDPL Sbjct: 1 MNEMNNNVASLARIDLNLFRVFVTIYKEKNLTRASEQLFLSQPAVSHALARLRDHFNDPL 60 Query: 57 FIRSGKGIAPTTTGLNLHHHLEKNLRGLEQTIN---IVNKSELKKNFIIYGPQLISCSNN 113 FIR G G+ P+ L +E++L+ + Q I + K+ I Sbjct: 61 FIRDGHGVVPSPLAKRLWPKIEQSLQLMHQAIQSTYDFVPARDLKHLTIAMNDEYEGIFL 120 Query: 114 SMLIRCLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRN 173 +I+ L Q + ++ + + + +N L K D I + S+ + Sbjct: 121 PSIIQHLTQF-NPNLQLNSVRIDRKNLRHELSTGKIDFAIDVQHSVEDSIGYECCTKDQF 179 Query: 174 TLICSNRHPRITDN-STYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLL 232 +I +HP ++ T E + + + S+ G + ++ + R ISFR Sbjct: 180 VVISRKQHPLLSSTDLTKEIYLDAKHITVSSRPTGRVFEDFFLSKQGIKRTISFRCQQYE 239 Query: 233 TIINSIAVTDLLGIVPYELYNSYRDFLN-LKEIKLEHPLPSIKLYISYNKSSLNNLVFSR 291 T I I TD L +P ++D +K L + ++ + +++ + Sbjct: 240 TAIRLITQTDHLLTIPQCQIAYFKDNYPQIKVHPLPIDIAGYQMNLYWDQQKSHEHQIVW 299 Query: 292 FIDRLNESF 300 +L + Sbjct: 300 CKAQLLQIM 308 >UniRef50_D1P5Q9 Transcriptional regulator, LysR family n=1 Tax=Providencia rustigianii DSM 4541 RepID=D1P5Q9_9ENTR Length = 305 Score = 285 bits (730), Expect = 2e-75, Method: Composition-based stats. Identities = 56/299 (18%), Positives = 109/299 (36%), Gaps = 5/299 (1%) Query: 4 LYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKG 63 + +L+K DLN LV + + +S+AAE+LY + AVS +L +LR F DPL +R Sbjct: 1 MNNLRKLDLNQLVTLSVLLRERHVSRAAEALYKSQPAVSHALNQLRELFQDPLLVRRDGQ 60 Query: 64 IAPTTTGLNLHHHLEKNLRGLEQTIN--IVNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 T+ +L L + L L+ I N +++F I + L+ LR Sbjct: 61 YQLTSKAESLCIPLNEALNQLDDLIAQKQFNPLSCQRHFNIAMSDYGAALIAVKLVPYLR 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 + + +I+ S E + L DL + S+ + T + I + Sbjct: 121 KYAP-DIDLKIWHCSREEMQNKLHEGSLDLAFGVFNTLDYSLRNQIVFTDKFVSIVDPQ- 178 Query: 182 PRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVT 241 ++ + K ++I ++ R+I+ + T Sbjct: 179 VCSQGKMDLIDWVSYPHILVSMKPFDANEIDHQLQLINQQRRIAVTVPYWQIAPQLLMGT 238 Query: 242 DLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 +L+ + + PLP + + +++ S + + + E Sbjct: 239 NLILTLAQK-AIPLSMSDKFTLFTPPLPLPDLVFQMIWHQRSDTDKAVYWLRETIVELL 296 >UniRef50_B7VJC4 Putative LysR-like regular protein n=4 Tax=Vibrionales RepID=B7VJC4_VIBSL Length = 308 Score = 284 bits (729), Expect = 2e-75, Method: Composition-based stats. Identities = 69/303 (22%), Positives = 130/303 (42%), Gaps = 6/303 (1%) Query: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 MA+ ++ K DLNLL+ + +Y+ S+SKAAE Y++ SA+S SLQRLR F+DPLF R Sbjct: 1 MAD-FNWKGIDLNLLIALQALYKTNSVSKAAERCYVSQSAMSHSLQRLRKLFDDPLFERV 59 Query: 61 GKGIAPTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLI 117 G + T + L +E L ++ + + + K + I L Sbjct: 60 GSKMEATDRAIELSSTVEALLNTIQSEVLLSKSFDAATYKGTWKIGLTDYAEQMFAPALF 119 Query: 118 RCLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLIC 177 ++Q S + ++ N +++ K D+ I +S+ L+T ++ + Sbjct: 120 DLIKQSSPNS-QVVLFNVNRSNYQQVFEDAKLDMAIGSFGEVSKQYRTTHLYTEQHVCLF 178 Query: 178 SNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINS 237 I + EQ +A E + + + + E +RK++ S+ LT+ Sbjct: 179 DKSVVSIEGPISLEQFVAVEHALVSPAGSLKTGVDKRLAELGFSRKVAICSSNFLTVKRL 238 Query: 238 IAVTDLLGIVPYELYNS-YRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRL 296 I +LL IVP + + +D + ++ +P + + Y K+ + Sbjct: 239 IRGRELLCIVPKLVARNDIQDQDTVVAVEPPIDVPDFDIQLIYRKTKHLDDKNKLLRKLF 298 Query: 297 NES 299 ++ Sbjct: 299 TQA 301 >UniRef50_C6XR04 Transcriptional regulator, LysR family n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XR04_HIRBI Length = 302 Score = 284 bits (729), Expect = 2e-75, Method: Composition-based stats. Identities = 63/303 (20%), Positives = 125/303 (41%), Gaps = 11/303 (3%) Query: 2 ANLYDLK--KFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIR 59 N + + DLNLL +FE +Y+ ++++AA L ++PSAVS +L+RLRA NDPLF++ Sbjct: 1 MNKIHSRTDRLDLNLLKVFEAVYREQNLTRAANLLSLSPSAVSHALRRLRAHLNDPLFVK 60 Query: 60 SGKGIAPTTTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSML 116 G+ + PT + L + L + + ++ K F I P + Sbjct: 61 EGRIMRPTPVCARMAPDLLDEIDRLRALLQSWGKFDPAQSKIVFTIGMPDAMEIVFFPEF 120 Query: 117 IRCLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLI 176 + +RQ + + L D+ + S+ + PL I Sbjct: 121 VEKIRQLAP-NVRIISARYDRNEMVASLSGHTLDICVDIALPTSKQLRHHPLTADDW-CI 178 Query: 177 CSNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIIN 236 S H T +A+E + +++ G +++R + R + R + L+ + Sbjct: 179 VSKTHTIQ----TAADYLAQEHIAVSARTVGTVLEDSALEQRGIFRDVRVRCQNYLSALA 234 Query: 237 SIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRL 296 + +D + +P L S LK + +P I+L + ++ + + + + Sbjct: 235 IVERSDRILTMPKRLAQSMIQSRPLKIQDVPFSMPPIELNLYWHSDNEADSANKWLREIV 294 Query: 297 NES 299 ++ Sbjct: 295 IDT 297 >UniRef50_A3VWI6 Transcriptional regulatory protein n=1 Tax=Roseovarius sp. 217 RepID=A3VWI6_9RHOB Length = 314 Score = 284 bits (729), Expect = 2e-75, Method: Composition-based stats. Identities = 61/297 (20%), Positives = 117/297 (39%), Gaps = 4/297 (1%) Query: 4 LYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKG 63 + + + DLNLL IF + ++++AA L +T +VS ++QRLR D LFI+ G Sbjct: 1 MINRRYTDLNLLRIFHVVMLERNMTRAAARLNMTQPSVSNAIQRLREVLADDLFIKVSGG 60 Query: 64 IAPTTTGLNLHHHLEKNLRGLEQTINI--VNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 + PT + + +++ L QTI+ S +F I ++ + L Sbjct: 61 VVPTAKAEAIWPTIRNSIQSLIQTIDPERFEPSVATDSFRIAMSDFVATQLILPVAGPLF 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 + + S +N L+ + D+ +P + + L T+ H Sbjct: 121 NAAP-HVSLVLCQNSVDNIVPGLIDGQFDMAAGVIPYKEARIRSILLKTLTYVCAMRKDH 179 Query: 182 PRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVT 241 P + T+ MA Q+ I + +R M R I+ ++ T Sbjct: 180 PLAKEPLTFADFMAARHLQVSLSGRS-GFIDRYLTDRGMFRDIALTIRHYTLAPEILSST 238 Query: 242 DLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 DL+ I+P E+ + + LK P+ + + +++ + +RL + Sbjct: 239 DLIAILPSEVISHSHQYDLLKTTAPPIPVYEDSISLLWHERNDAMPAHRWMRERLID 295 >UniRef50_A3VAM0 Nodulation protein d1 n=1 Tax=Rhodobacterales bacterium HTCC2654 RepID=A3VAM0_9RHOB Length = 312 Score = 284 bits (727), Expect = 4e-75, Method: Composition-based stats. Identities = 62/298 (20%), Positives = 121/298 (40%), Gaps = 6/298 (2%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 K DLNLLV + + + ++S+AAE L+++ SA S +L RLR FND L ++ G+ + Sbjct: 3 MRFKGLDLNLLVALDVLLREKNVSRAAEKLFLSQSATSGALARLREYFNDDLLVQVGRQM 62 Query: 65 APTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 T L + L ++ TI + S + I I+ S +R + Sbjct: 63 VLTPRATALSGKVRSALVQIDGTIIQSPEFDPSTAVRILRIISSDFITISVLREAVREIG 122 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 + + + DI A E + + DL++ IS T +I + + Sbjct: 123 KSAP-GLTI-DIQQPANKPHEKIERGEVDLLLMPELYISPDHPSEQFFTDDYVVIAWSGN 180 Query: 182 PRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEID-ERFMNRKISFRGSSLLTIINSIAV 240 + D T +Q A ++ +S I + R I+ S + I Sbjct: 181 TQFGDTITEDQFFAARHATVMFESHTPSYEAWFIQNKDGRERDIAIVVGSFSALPFMIEG 240 Query: 241 TDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 TD L ++ + + + + L+ ++ +P + I ++ S + + ++++E Sbjct: 241 TDYLALMHRSMADIFARQMPLRLLRCPIDIPPLVESIQWHTYSDGDECLAWVREKIHE 298 >UniRef50_Q9FD34 PnbR n=2 Tax=Pseudomonas RepID=Q9FD34_PSEPU Length = 348 Score = 283 bits (726), Expect = 4e-75, Method: Composition-based stats. Identities = 60/322 (18%), Positives = 131/322 (40%), Gaps = 28/322 (8%) Query: 4 LYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKG 63 + K DLNL+ +F+ + + S+ +A++ L+++ SAVS +L RLR +F+R+GKG Sbjct: 20 MIAFDKLDLNLIRVFDAVMEERSVLRASQRLHLSQSAVSHALSRLREGLGQEIFVRTGKG 79 Query: 64 IAPTTTGLNLHHHLEKNLRGLEQTIN----IVNKSELKKNFIIYGPQLISCSNNSMLIRC 119 ++PT+ L + L L + + ++ + + ++F+I +S + L Sbjct: 80 MSPTSYALEISGALHAALLSMSKALSQAATPFSPQSVCRSFVIAANDYVSATLLPQLNHQ 139 Query: 120 LRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMP-LHTIRNTLICS 178 L + + I+ + + E + + D+ I + P L ICS Sbjct: 140 LSKVAP-GIDLQITPATRLDLAEQIDLGRIDVAIGTFRSVPERFRTKPVLFQDE-VFICS 197 Query: 179 NRHPRITDNSTYEQIMAEEFTQLISKSAG---------------------VDDIQMEIDE 217 HP + + ++ + G ++ ++E Sbjct: 198 GTHPISANKPQLQDLVRYPLAVVSLGGEGEGMLSGYILERGLARQAQMYDRTALEQALNE 257 Query: 218 RFMNRKISFRGSSLLTIINSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYI 277 ++ + L + + ++LL IVP L ++ L K L +P +L + Sbjct: 258 AGLSMRRQIVLPHFLALPMLLEGSELLAIVPQPLARTFARTLGFKIKPLPYPAARQQLDL 317 Query: 278 SYNKSSLNNLVFSRFIDRLNES 299 ++ S+ N+ ++++E+ Sbjct: 318 IWHSSNDNDPAQLWLHEQISEA 339 >UniRef50_B9JQ31 Transcriptional regulator n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JQ31_AGRRK Length = 296 Score = 283 bits (726), Expect = 4e-75, Method: Composition-based stats. Identities = 65/293 (22%), Positives = 120/293 (40%), Gaps = 5/293 (1%) Query: 11 DLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTTG 70 DLNL+ F IY+ S+S AA L +T +VS +L RLR +D LF R+ G+ PT Sbjct: 3 DLNLIRAFIAIYETESVSGAAVKLNLTQPSVSHALSRLRDMLDDTLFTRTRDGMKPTFVA 62 Query: 71 LNLHHHLEKNLRGLEQTIN---IVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSVE 127 ++ L +E I + + F + L + ++ L Q++ + Sbjct: 63 ERMYGIFRSALSEIETAIASRWSFDPKSSNQVFKLAFSDLGEMTFLPHILPRLSQEAP-K 121 Query: 128 IECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRITDN 187 + + + E ++ K D I P+ R + S RHPRI D Sbjct: 122 VGIEVVELEVEKLDDWFATGKIDAAIFNSTSAKVQSRSEPIFQERYVCLVSARHPRIRDQ 181 Query: 188 STYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLGIV 247 + EQ ++E + S S G ++ +I R++S R + + +A T+LL + Sbjct: 182 VSLEQYLSEGHIVVSSHS-GHRQVEDQIRAIGAARQVSLRLPHFTGLHDIVAKTELLATL 240 Query: 248 PYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 P + + +K + P+P ++ + + ++ + + L Sbjct: 241 PSRTAHMFASSGMVKYCTIPLPIPEFEVRLHWRETDGEIEAQAWLREILKSCL 293 >UniRef50_A5V8P8 Transcriptional regulator, LysR family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V8P8_SPHWW Length = 316 Score = 283 bits (725), Expect = 5e-75, Method: Composition-based stats. Identities = 60/304 (19%), Positives = 123/304 (40%), Gaps = 15/304 (4%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 L +FDLNLLV+ + + S+++AAE L++T AVS SL RLR F DPL +R G+ + Sbjct: 5 LTQFDLNLLVVLDALLTEKSVTRAAERLFVTQPAVSGSLARLRDIFEDPLLVRVGREMEL 64 Query: 67 TTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCL-RQ 122 T L + + L ++ + + +E K F I S + ++R L + Sbjct: 65 TVRARALAGPVREALLMVKAALGSEESFDPAETKCEFRIAMTDYCSMTILPRIVRELSAR 124 Query: 123 DSSVEIECHDILMSAENAEELLVHRKADLVITQMP-------VISRSVICMPLHTIRNTL 175 +E+ ++ + + L + D ++T + + T Sbjct: 125 APGIELAVEGLVNKS---FDRLETGEIDFLLTVVERTLLMHSRHPDMLRGADAFEDCYTC 181 Query: 176 ICSNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTII 235 + + HP T E A + + + +++ + S +++ Sbjct: 182 VVAADHP-FDGALTPEDFRAYPNATVSFGENTFTTDRAAYEHGGLDQSPALIAPSFSSLL 240 Query: 236 NSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDR 295 + T L+G VP L + L ++ ++ LP++ ++++ S + S + Sbjct: 241 FQLQGTTLIGTVPNRLAEMFAPMLGVRLLEPPIRLPTLTERLNWHVRSDADPGHSWMRNL 300 Query: 296 LNES 299 + + Sbjct: 301 ILDV 304 >UniRef50_A4XRF8 Transcriptional regulator, LysR family n=2 Tax=Pseudomonas RepID=A4XRF8_PSEMY Length = 320 Score = 283 bits (725), Expect = 5e-75, Method: Composition-based stats. Identities = 62/298 (20%), Positives = 119/298 (39%), Gaps = 7/298 (2%) Query: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 M N DL++ D+NLLV+FE + ++S+ E L++ AVS +L RLR F+DPLFIR+ Sbjct: 1 MMNRNDLRRADINLLVVFETMMHEQNVSRVGEKLFLGQPAVSAALGRLRHLFDDPLFIRT 60 Query: 61 GKGIAPTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLI 117 G+ + PT+ + +L L + + + + + F I + + L+ Sbjct: 61 GRVMEPTSRAQEIFSNLTPALDSIAAALGKCQTFDPTTSEATFHIGLSDDVEYALLPTLL 120 Query: 118 RCLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLIC 177 R LR D+ I +LL + L I+ + + L +IR L+ Sbjct: 121 RHLRVDAP-NIRLVVRRADQWQLPQLLASGEISLGISHALQLPANARSKHLRSIRPMLL- 178 Query: 178 SNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINS 237 T E+ + S +++ + RK+ + Sbjct: 179 RADS--QAGALTLEEFCRRPHAVVSSMGNVIENADRALHSLGRQRKVVLAVPQFSALPML 236 Query: 238 IAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDR 295 + + ++ IVP + + L+ + LP +L + + ++ ++ R Sbjct: 237 LEGSSMIAIVPEYVAQAMSGSGGLRAEAVPVVLPQQELSMVWRGAAHSDPGERWLRSR 294 >UniRef50_B9Z7Z3 Transcriptional regulator, LysR family n=3 Tax=Proteobacteria RepID=B9Z7Z3_9NEIS Length = 324 Score = 283 bits (725), Expect = 6e-75, Method: Composition-based stats. Identities = 57/296 (19%), Positives = 110/296 (37%), Gaps = 8/296 (2%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 + D NLLV + + S+++AA L ++PSA+S++L RLR DPL +R+G+G+ P Sbjct: 1 MSTPDFNLLVTLDVLLAEGSVARAARRLRLSPSAMSRALARLRETTGDPLLVRAGRGLVP 60 Query: 67 TTTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCLRQD 123 T L L + + ++ + ++ ++L + F + + LI + + Sbjct: 61 TPRALELREQVSQLVQDAAAVLRPAEKLDLTQLVRTFTLRVGDGFVENFGPSLIARVGEA 120 Query: 124 SSVEIECHDILMSAENAEELLVHRKADLVITQMPV-ISRSVICMPLHTIRNTLICSNRHP 182 + + + S ++ L DL + V L R + HP Sbjct: 121 AP-GVRLRFMPKSNKDTAP-LRDGSVDLDTGVVGEGTGPEVRVRALFQDRFIGVVRQGHP 178 Query: 183 RITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTD 242 T + A + + + + + R+I + TD Sbjct: 179 LCQGEITPARYAAGRHVLVSRRGTDKGPVDETLRAIGLEREIMTIVGGFAPALALARATD 238 Query: 243 LLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 L+ VP + RD + L P P I + + ++ +L + E Sbjct: 239 LVATVPERHTGTLRD--GMHSFALPFPAPEITVSLLWHPRMDADLAHRWLRGCVRE 292 >UniRef50_A7K354 LysR substrate binding domain protein n=17 Tax=Gammaproteobacteria RepID=A7K354_VIBSE Length = 314 Score = 283 bits (725), Expect = 6e-75, Method: Composition-based stats. Identities = 65/298 (21%), Positives = 124/298 (41%), Gaps = 4/298 (1%) Query: 2 ANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSG 61 + DLNLLV F +Y++ S+S AAE Y++ SA+S SL RLR F+DPLF R G Sbjct: 10 KEDIQWRNIDLNLLVTFSYLYRYRSVSVAAEKSYVSQSAMSHSLSRLRLLFDDPLFERKG 69 Query: 62 KGIAPTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIR 118 + PT ++ + L + + + + I L Sbjct: 70 HKMEPTEHAHHIAPTVHHLLDSIAKDLLTKSAFQPENYAGICRIGLTDYAEFIFAPRLYD 129 Query: 119 CLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICS 178 +RQ + + I ++ N L H K D++I MPV+ + + L+T ++ +C Sbjct: 130 EIRQRAPEA-QISFINVNRSNYVALTEHEKLDVIIGSMPVLDDNFESLYLYTEKHVCMCD 188 Query: 179 NRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSI 238 + + + E E + + + ++ E ++RK++ + LTI + + Sbjct: 189 KQVLKGETQLSLEAFANIEQALVSPDGSLKTQVDQKLAEHGLSRKVTVASRNFLTIRHLL 248 Query: 239 AVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRL 296 DL+ IVP ++ + +L + + + + ++ S N + + Sbjct: 249 KKRDLIAIVPEKMALAEGFSDDLITVNPPIAVADFDIAMLWHSSRNNEDKGIWLRELV 306 >UniRef50_A4JED2 Transcriptional regulator, LysR family n=9 Tax=Proteobacteria RepID=A4JED2_BURVG Length = 308 Score = 283 bits (725), Expect = 6e-75, Method: Composition-based stats. Identities = 54/299 (18%), Positives = 108/299 (36%), Gaps = 7/299 (2%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 K DLNLLV + + +IS+AAE ++++ SA S +L RLR F+D L ++ G+ + Sbjct: 1 MRFNKLDLNLLVALDALLSEQNISRAAEKIHLSQSATSNALARLREYFDDELLVQVGRKM 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRC-L 120 PT L + L ++ T+ ++ + F ++ + L R Sbjct: 61 EPTPRAEALKDAVRDILVRVDATVTAQPEFVPAQACRLFRLFVSDYTMTTLIPHLFRLAY 120 Query: 121 RQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNR 180 Q + + + L +ADL+I S L + Sbjct: 121 AQAPGIGFDLRPQVAYPHRV---LERGEADLLIIPKEYCSTEHPAEVLLEETFCCVLWEH 177 Query: 181 HPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAV 240 P T E+ M + + + R++ S L+ + + Sbjct: 178 SPLAKGELTKERYMGAGHIVVQVGEGQTALEAWFMQRLGVVRRVEASTYSFLSPAHLLVG 237 Query: 241 TDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNES 299 T+ + + L + L L + +P+++ + ++K ++ L E+ Sbjct: 238 TNRIATMHRRLAEAAARDLPLVLRDVPLTVPTMEQSVQWHKHRTSDQGLMWLRALLKEA 296 >UniRef50_A1UYR8 Transcriptional regulator, LysR family n=32 Tax=Burkholderia RepID=A1UYR8_BURMS Length = 313 Score = 282 bits (724), Expect = 6e-75, Method: Composition-based stats. Identities = 59/298 (19%), Positives = 118/298 (39%), Gaps = 5/298 (1%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 +L+ DLNLLVI + + +++A + + +T AVS +L RLR F D + +R+ G+ Sbjct: 1 MNLRSIDLNLLVILDALLAERQVTRAGQRIGLTQPAVSNALGRLRYVFKDEILMRTPLGM 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 T L + + L+ +E+ N + + F + L L+R +R Sbjct: 61 ELTPRAKALACPIRQILQQIEELFVPENQFDSFTSDRRFTLRMSDLTELLLPPPLLRNIR 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 + I + + ++A+ E L + D+ + ++ L R + S RH Sbjct: 121 GTAP-HIRMNVMHLNADKTVEALDSGRLDMAVCAGLDHPDAISSQVLFQDRLVCVLSRRH 179 Query: 182 PRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVT 241 P T E+ A +F + I + + R+I+F L + + + Sbjct: 180 PDANRPLTLERFAALDFLNVSINPVDSSLIDTMLADMRFTRRIAFNVPHWLVVPSMLDAL 239 Query: 242 DLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNES 299 L I+ S D L +L L + + +++ N++ + + + Sbjct: 240 PLAVIMSERHALSLGDS-RLAIRELPLDLEPVTWTLYWHRRYDNSVAHEWLRNCITDV 296 >UniRef50_A6ARN3 Transcriptional regulator, LysR family n=4 Tax=Vibrio RepID=A6ARN3_VIBHA Length = 305 Score = 282 bits (724), Expect = 7e-75, Method: Composition-based stats. Identities = 65/302 (21%), Positives = 126/302 (41%), Gaps = 4/302 (1%) Query: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 M + + DLNLLV F +Y++ S+S AAE +++ SA+S SL RLR F+DPLF R Sbjct: 1 MKDDIQWRNIDLNLLVTFSYLYRYRSVSLAAEKSFVSQSAMSHSLSRLRVLFDDPLFERK 60 Query: 61 GKGIAPTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLI 117 G +APT + + L + + + + I +L Sbjct: 61 GHKMAPTEHAHYIAPTVHHLLDSIAKDLLTKSAFLPENYAGVCRIGLTDYAEFIFAPLLY 120 Query: 118 RCLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLIC 177 +R+ + + I ++ N + H K D++I MPV+ + L+T ++ +C Sbjct: 121 DEIRKRAPEA-QISFINVNRSNYVAITEHDKLDVIIGSMPVLDDNFESQYLYTEKHVCLC 179 Query: 178 SNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINS 237 R + + E + + + ++ E ++RK++ + LTI N Sbjct: 180 DKRVLKGETQLSIHAFANIEQALVSPDGSLSTQVDKKLAEHGLSRKVTVASRNFLTIRNL 239 Query: 238 IAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLN 297 + +L+ IVP ++ + +L ++ + + + ++ S N + Sbjct: 240 LKQRELVAIVPEKMAQAEGFSDDLVSVQPPIAVADFDIAMLWHTSRNNEDKGIWLRQLVA 299 Query: 298 ES 299 E Sbjct: 300 EL 301 >UniRef50_A1UXD8 Transcriptional regulator, LysR family n=41 Tax=cellular organisms RepID=A1UXD8_BURMS Length = 355 Score = 282 bits (723), Expect = 8e-75, Method: Composition-based stats. Identities = 52/284 (18%), Positives = 106/284 (37%), Gaps = 5/284 (1%) Query: 17 IFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTTGLNLHHH 76 +F+ + Q ++S+AA L+++ AVS +L RLR Q +PLF R+ +G+ PT L+ Sbjct: 59 VFDALMQEQNLSRAAIRLHMSQPAVSNALTRLRQQLGEPLFTRTARGMTPTAQARTLYEP 118 Query: 77 LEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSVEIECHDI 133 + + L L+ + F + L+ ++ + + Sbjct: 119 VRQALYLLQIGLGPQADFEPDT-HHLFKLSMNDYGQTVLLPDLLAHIKSRAP-NVMLSVQ 176 Query: 134 LMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRITDNSTYEQI 193 A + L DL I + + + PLH +I HP Sbjct: 177 SDDAGSIPAQLTTGTLDLAIDYLHFDNPELCYEPLHEEHLVVIGRAGHPAFAGGLALRGY 236 Query: 194 MAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLGIVPYELYN 253 + + +++ + + R + + LTI +A +DLLG +P L Sbjct: 237 EESGHVSIQPRDRRGSPLEIVLGSARVRRVVHLQVPHYLTIPALVAKSDLLGTIPRRLAE 296 Query: 254 SYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLN 297 + D L+ L + I++ + +++ +++ Sbjct: 297 RFADVYALQIAPLPIDIAPIQVSLIWHRQQDAQPGLRWLREQVV 340 >UniRef50_Q46MT9 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46MT9_RALEJ Length = 334 Score = 282 bits (723), Expect = 1e-74, Method: Composition-based stats. Identities = 58/299 (19%), Positives = 103/299 (34%), Gaps = 6/299 (2%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 K DLN LV+ + + S+ KAAE L+++ A S SL RLR F D L + GK Sbjct: 1 MRFNKLDLNQLVVLDALLSTRSVGKAAERLFLSQPATSCSLARLREYFEDDLLVAVGKTQ 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 T L L + L ++ + + + FII + S +IR Sbjct: 61 VLTPLALGLRKPVRDVLLQIQTITRARPSFDPATSTRRFIIESSDYVISVFLSQVIRRAA 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 + + + D+ + E L +A+L+I + PL + + S Sbjct: 121 EAAP--LMQFDLRAISPQTPEHLESGEAELLIAPEFAMVPGHPSEPLFEDTFSCLVSADS 178 Query: 182 PRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMN-RKISFRGSSLLTIINSIAV 240 D T E + + R+ S + ++ Sbjct: 179 TVGQDGLTVETYFDAAHIGVEWGGGRRVTFDSRLIATGKRTRRQDVIAPSFTLVPALLSG 238 Query: 241 TDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNES 299 TD + +P L L+ + LP+ ++ + K ++ + L E+ Sbjct: 239 TDRIATLPTRLAEQMAQRFGLRRVTCPIDLPAFSEHLQWQKYQESDPAIVWLRELLRET 297 >UniRef50_B4RWU1 Transcriptional regulator n=2 Tax=Alteromonas macleodii RepID=B4RWU1_ALTMD Length = 347 Score = 282 bits (722), Expect = 1e-74, Method: Composition-based stats. Identities = 52/284 (18%), Positives = 109/284 (38%), Gaps = 3/284 (1%) Query: 17 IFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTTGLNLHHH 76 IF+ I +I++AA+ L +T AVS +L R+R +ND LF++ G+GI PT+ NL Sbjct: 2 IFDAIMTEGAITRAADRLSMTQPAVSNALSRMRTAWNDELFVKDGRGIQPTSFAKNLWSQ 61 Query: 77 LEKNLRGLEQTINI--VNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSVEIECHDIL 134 ++ L LE +N N + K+ F I I L + + ++ I H I Sbjct: 62 IQGPLGELEVAVNPTDFNPASAKRTFRIAATDNIVSMVWGPLRKVIENEAP-GINIHAIP 120 Query: 135 MSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRITDNSTYEQIM 194 +++L +A+L ++ + + ++ HP + E + Sbjct: 121 NYDMETDKILKDAEAELTFSKYQEPGSVIRAEHVLDPSWVVVMRPDHPLAKSQLSLEDFV 180 Query: 195 AEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLGIVPYELYNS 254 A + + + + R+++ + + ++L+ + P + Sbjct: 181 AADHLLVSVTGDVSGPTDQVLANLGLRRRVAMSVNQFHNATPLLKESNLICVAPSLVMEK 240 Query: 255 YRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 L + + S L + ++K + + + Sbjct: 241 EIFSGELAVFETPIEIVSSPLSVMWHKRQDQDAGLQWLRGLVVK 284 >UniRef50_Q2CCM2 Transcriptional regulator, LysR family protein n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CCM2_9RHOB Length = 313 Score = 281 bits (721), Expect = 2e-74, Method: Composition-based stats. Identities = 57/304 (18%), Positives = 114/304 (37%), Gaps = 9/304 (2%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 +L FDLNLL + + + + S ++AA + ++ AVS +L RLRA D LF+R G+G+ Sbjct: 1 MNLAGFDLNLLKVLDALLRERSTTRAAARVGLSQPAVSAALGRLRAALGDELFLRRGQGL 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 T L L + L LE + + + K+ F + G + L L Sbjct: 61 VATDFARALEAPLRETLDRLEDLLAAPQEFDPATAKRTFRLAGIDFFAEMLMPQLAARLA 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 + + + + E L +AD+ + + L L + + Sbjct: 121 AAAP-GVRIQLLNLVPREYEATLERYEADVALFPLTGSPEWAEHRLLFRSPFVLAAAAGN 179 Query: 182 PRI-----TDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIIN 236 PR+ D + + R++ +S I+ Sbjct: 180 PRLAHLAEGDTVPLDLFCDLGHILFSLDGNLRAMGDDALAAVGRQRRVVMSMASFPGILR 239 Query: 237 SIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRL 296 ++A ++ + +VP +L + + L+ L PL + + +++ S + +++ Sbjct: 240 AVAGSEAVSLVPVQLARKLQGEMGLRCFALPMPLEPPVIGMMWHRRSSATPAHAWLREQI 299 Query: 297 NESF 300 E Sbjct: 300 VELM 303 >UniRef50_A4GJC2 Transcriptional regulator LysR family protein n=1 Tax=uncultured marine bacterium EB0_49D07 RepID=A4GJC2_9BACT Length = 303 Score = 281 bits (721), Expect = 2e-74, Method: Composition-based stats. Identities = 60/300 (20%), Positives = 134/300 (44%), Gaps = 9/300 (3%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 + FDLNL VI IY S++KAAE + IT AVS +L RLR +F+D LF+R+G G+ Sbjct: 1 MKISSFDLNLFVIMNSIYTEGSLTKAAEVVGITQPAVSNALSRLREKFDDELFVRTGSGM 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 PT N+ ++ L+ +++++ + N ++ F I + ++L+ + Sbjct: 61 VPTQKTENIIQDIQNALQLMQKSVNEPDEFNPKTSERTFRISLGDINEGRILAILMSKIG 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 + + ++ + + L + + S+ M + + + + H Sbjct: 121 KSAP-HVKIESYYSARDQVPHALATNELSFAVDPFIPNSKDTNSMKVFSDKFVVAHRANH 179 Query: 182 PRIT-DNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAV 240 +N E+++ ++ + ++ G ++ME+ + + +++ R L + Sbjct: 180 DVSKIENLNLEEMLKLKYINISNRKRGASVVEMEMQKMQLQPEMALRAQHYLVTPEIVRS 239 Query: 241 TDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 +DL + ++ L ++L +P+++ Y+ ++ S N+ + + ESF Sbjct: 240 SDLCLLC----AETFAKKHGLSYVELPFKVPALEQYLIWHNSDDNDGSHIWMRNLIAESF 295 >UniRef50_C7RKX8 Transcriptional regulator, LysR family n=20 Tax=Proteobacteria RepID=C7RKX8_9PROT Length = 310 Score = 281 bits (720), Expect = 2e-74, Method: Composition-based stats. Identities = 58/297 (19%), Positives = 112/297 (37%), Gaps = 8/297 (2%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 + DLNLLV + + S+++AA+ L ++PSA+S++L RLRA DPL +R+G+G+ P Sbjct: 1 MSTADLNLLVTLDVLLAEGSVARAAQRLRLSPSAMSRALARLRATTGDPLLVRAGRGLVP 60 Query: 67 TTTGLNLHHHLEKNLRGLEQTINIVNKSELKKNFI---IYGPQLISCSNNSMLIRCLRQD 123 T L L + ++ E + V K +L++ + + + LI + + Sbjct: 61 TPRALELREQVGPLVQAAEAALRPVEKLDLERLVRMYTLRTSEGFVENFGPDLIARVAEQ 120 Query: 124 SSVEIECHDILMSAENAEELLVHRKADLVITQMP-VISRSVICMPLHTIRNTLICSNRHP 182 + + + S +N+ L DL + + + L R + HP Sbjct: 121 AP-GVRLCFVQKSNKNSAP-LRDGSVDLETGVVGKATAPELRVQALFRDRFIGVVRMGHP 178 Query: 183 RITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTD 242 T + + + + I + + R+I S T + +D Sbjct: 179 LSQGEMTPHRYATGKHILVSRRGFDRGMIDEALKPLGLERQIVTIVSGFSTALVLARASD 238 Query: 243 LLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNES 299 L+ VP + L P I + + ++ + + E Sbjct: 239 LIASVPERHTAKL--RAGMHSFPLPIATPEITVSLHWHPRMDADPAHRWLRGCVREV 293 >UniRef50_B8ERS8 Transcriptional regulator, LysR family n=1 Tax=Methylocella silvestris BL2 RepID=B8ERS8_METSB Length = 323 Score = 281 bits (720), Expect = 2e-74, Method: Composition-based stats. Identities = 52/317 (16%), Positives = 121/317 (38%), Gaps = 22/317 (6%) Query: 4 LYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKG 63 + ++ DLNLL +FE + +H S+ +A+ L +T SAVS +L RLR D LFI G Sbjct: 1 MVRIRTIDLNLLRVFEAVMRHRSVIRASRELGVTASAVSHALSRLRQALGDELFISGEAG 60 Query: 64 IAPTTTGLNLHHHLEKNLRGLEQTI--NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 + PT L L + L ++ + ++ + F I ++ + L+ L Sbjct: 61 MEPTARALELEPAIRDGLERIDHAVGAQPFVPTDAFRTFRIAATDYVAVAILPQLVGRLA 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 + + +I+ + + L + D V+ + + + + ++ H Sbjct: 121 EVAP-QIDLRIFPFNRTDVVRHLDEGRIDFVMGWFGDLPDRMRRATIVVEKEAMVVRTGH 179 Query: 182 PRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNR------------------- 222 P T E++ + + + D+R + R Sbjct: 180 PLTEGPLTKERLFSFPHIVVELIGTEEAAVDGFFDDRGVWRRVWIERLLIEADADQGEVG 239 Query: 223 KISFRGSSLLTIINSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKS 282 +++ + + V+D++ +P L + + +L + L + ++ + + +++ Sbjct: 240 RVAVSVPHYAAVPPMVRVSDMVATLPSALARAAVEQGSLVMLDLPYEPLAVPVEMVWHQR 299 Query: 283 SLNNLVFSRFIDRLNES 299 + + + L + Sbjct: 300 TERDEGSQWLLGELISA 316 >UniRef50_A0KIB7 Transcriptional regulator, LysR family n=2 Tax=Aeromonas RepID=A0KIB7_AERHH Length = 303 Score = 281 bits (719), Expect = 2e-74, Method: Composition-based stats. Identities = 64/296 (21%), Positives = 123/296 (41%), Gaps = 5/296 (1%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 +L+ DLNLLV+ + + + + +KAAE L ++ AVS++L RLR ++DPL IR+ +G+ Sbjct: 1 MNLRGVDLNLLVVLKALLEERNTTKAAERLAMSQPAVSRALARLRLLYDDPLLIRTPQGM 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 PT L L + L +EQT + ++ ++ + I + L+ L+ Sbjct: 61 EPTARAEALLLPLREILHDIEQTFSPPEQLDPAQFEGVLRIGAHTYVEYVMMPSLLARLQ 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 Q + + H + ++A + E L +VI++ + +PL + H Sbjct: 121 QQAP-NLRIHMVPLNA-DYESQLDEGVISMVISKQDEVPGRFRRIPLFEDKLICAAHRSH 178 Query: 182 PRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVT 241 P E + + + + + + M R S L + Sbjct: 179 PLQGQVLCIESFAQAQHLLVAPRGSEGGIVDDLLAAHGMTRHTPLIVQSFLAAPFILPCA 238 Query: 242 DLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLN 297 LL P + L+L E + LP+ ++ + ++ NN + + F L+ Sbjct: 239 PLLLTSPARVLRPLMPLLDLVEYETRFALPTFEVSLIRHRRDDNNAMLNWFESELH 294 >UniRef50_A1UYG7 Transcriptional regulator, LysR family n=45 Tax=Burkholderia RepID=A1UYG7_BURMS Length = 439 Score = 281 bits (719), Expect = 3e-74, Method: Composition-based stats. Identities = 55/295 (18%), Positives = 104/295 (35%), Gaps = 5/295 (1%) Query: 8 KKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPT 67 + DLNL + + +Y IS AA +L++T AV+ +L RLRA F DPLF+R G + PT Sbjct: 136 HRLDLNLFRVLDAVYVQGGISAAARALHLTQPAVTHALNRLRAHFGDPLFVRQGNKVVPT 195 Query: 68 TTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDS 124 + ++++L+GL+ + L +F++ ++ L+ L +++ Sbjct: 196 ERTREVIADVQRHLKGLQDAARAQTRFSPGALDMSFVVGVRDVLESIALPQLVETLAREA 255 Query: 125 SVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRI 184 + + + L DL I + ++ + + H Sbjct: 256 P-GVRLVSRRVPVADIGRELGSGNLDLAIERRVPAGPRIVAEHVADDTLVVAMRRDHALA 314 Query: 185 TDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLL 244 A + + + + R+I +A DLL Sbjct: 315 GAPLRRADYFAAGHVTVSPLGEPHT-LDVLLGADGRFRRIQLVCQHYFAACQIVASGDLL 373 Query: 245 GIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNES 299 +P L L L L + +++S + F R+ E Sbjct: 374 LTLPRSYALRMTRLLPLAAQPLPLRLKPYPILAYWHESRELDRAHQWFRQRVIEV 428 >UniRef50_A9R140 Substrate-binding transcriptional regulator, LysR family n=34 Tax=Enterobacteriaceae RepID=A9R140_YERPG Length = 322 Score = 280 bits (718), Expect = 4e-74, Method: Composition-based stats. Identities = 68/295 (23%), Positives = 136/295 (46%), Gaps = 4/295 (1%) Query: 6 DLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIA 65 L+ DLNLL +F+ + Q ++++AA+SL ++ AVS ++ RL+ FND LF+R G+GI Sbjct: 25 HLRSVDLNLLTVFDAVMQMQNVTRAAQSLGMSQPAVSNAVARLKVMFNDELFVRYGRGIQ 84 Query: 66 PTTTGLNLHHHLEKNLRGLEQTI--NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQD 123 PT L + + L+ ++ + ++ F + + + +++ ++Q Sbjct: 85 PTARARQLFGPVRQALQLVQNELPGAGFEAKNSERLFNLSICSPLDVRLAAQIVQRVKQS 144 Query: 124 SSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPR 183 + ++ +N E L +++ + VI +PL L S HPR Sbjct: 145 AP-NVQLVIKSYLNDNIEHQLRYQETEFVIGYTEFDRPDFHRIPLFKDELVLAVSKDHPR 203 Query: 184 ITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDL 243 I D+ T Q+++E + G + D + I++ + + +++N ++ T Sbjct: 204 INDSITENQLLSESHAVVSLDKKG-SFSEPYYDSTTSTQSIAYESTDMNSVLNIVSQTYF 262 Query: 244 LGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 + I P L +Y + LNLK I L S Y+++++S+ + L + Sbjct: 263 VAIAPRWLVKTYSEALNLKLISLPWENTSRACYLTWHESTDRDKGHQWMKALLGQ 317 >UniRef50_C5CZY6 Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus S110 RepID=C5CZY6_VARPS Length = 325 Score = 280 bits (718), Expect = 4e-74, Method: Composition-based stats. Identities = 53/301 (17%), Positives = 103/301 (34%), Gaps = 7/301 (2%) Query: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 M DL D++LL + + S+S+AA + T A+S +L+RLR F DP+ +R Sbjct: 1 MTRSQDL--VDIHLLRVLAALVAERSVSRAAVRMNQTQPAISAALRRLRDAFGDPILVRE 58 Query: 61 GKGIAPTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLI 117 G+ PT L L + L +++ + F I P ++ S + ++ Sbjct: 59 RGGMVPTARALQLRESAREVLGEIDRMLAGPERFEPGASTMTFTIATPDYLAASFMAEVV 118 Query: 118 RCLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLIC 177 R ++ L + E L + D+VI P+ + L + Sbjct: 119 ARFRAEAPQARLLIHPLTPGYDYERALAQGELDIVIGNWPLPPERMHLSLLIEDELVCMM 178 Query: 178 SNRHPRIT-DNSTYEQIMAEEFTQLIS-KSAGVDDIQMEIDERFMNRKISFRGSSLLTII 235 S +P T ++ +A + + + R Sbjct: 179 SPGNPLAAPGAMTLQRYLAAAHVVPTPFAKSHRAVVDSHLAGLRQTRDARVFVPYYAMAP 238 Query: 236 NSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDR 295 +A +DL+ + L + + P ++ Y +++ S + Sbjct: 239 YLVAESDLVFTTARHFAEQFTRSLPVVSVAAPEGFPRMRFYQLWHERSQHQGAHRWLRSL 298 Query: 296 L 296 L Sbjct: 299 L 299 >UniRef50_Q7MC61 Transcriptional regulator n=9 Tax=Gammaproteobacteria RepID=Q7MC61_VIBVY Length = 313 Score = 280 bits (717), Expect = 4e-74, Method: Composition-based stats. Identities = 74/294 (25%), Positives = 130/294 (44%), Gaps = 4/294 (1%) Query: 10 FDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTT 69 DLNLL F+ + + S+++AAE+L IT AVS +L RLR Q+ DPLFIR G+GI PT Sbjct: 15 MDLNLLKTFDVVMKTRSVNEAAETLGITAPAVSHALNRLRDQYQDPLFIRQGRGITPTNF 74 Query: 70 GLNLHHHLEKNLRGL---EQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSS- 125 + LH +++ L L ++ N + F + + I L+ L Q + Sbjct: 75 AIELHAEIQEPLSLLLNGAKSRQQFNPDTSHRTFRLSSHKDIDLMLLPPLMDHLAQHAPN 134 Query: 126 VEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRIT 185 V++ + + + L RK D+++ +P L + ++C HPRI Sbjct: 135 VKLCADVEHLDERDRQADLRTRKVDMILATVPFDEHGYHNELLFELPLVMVCRQDHPRIQ 194 Query: 186 DNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLG 245 + T++Q AE+ +K D + E R I+++ S I A TD + Sbjct: 195 NTITHQQFFAEQHLLWETKRQNQDIVDSLALEPQPQRNIAYKTGSSCNAIMMAAQTDWIC 254 Query: 246 IVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNES 299 + + L+ + L L + +Y++++ S + L ++ Sbjct: 255 VTGQWHADLMAKAHQLQVMPLPFKLNKLPIYMTWHHSQQQDSGHQWLKSALMQA 308 >UniRef50_D0LUZ7 Transcriptional regulator, LysR family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LUZ7_HALO1 Length = 306 Score = 280 bits (717), Expect = 5e-74, Method: Composition-based stats. Identities = 57/298 (19%), Positives = 112/298 (37%), Gaps = 7/298 (2%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 + D NLLV + + + S+++AA + IT SA+S +L RLR DPL +R+G+ + Sbjct: 1 MYIYGIDANLLVSLDALLREASVTRAAHRVGITQSAMSHALGRLRDHLGDPLLVRAGRNM 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 T +L + + + + + L++ F + + R LR Sbjct: 61 VLTAKAESLAPRVSVLVEEMSRVFAPDEEFEPAALRRGFALRATDHAQFVLMPEVDRLLR 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 ++ ++ +S A L ++DL + + L T R + H Sbjct: 121 AEAP-GVDLVVTALSGG-AVAPLRQAQSDLTLGTFSDHPSDIHSQALLTDRFVCLVRGDH 178 Query: 182 PRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVT 241 P I Q A + A + + + E + R+IS +L IA + Sbjct: 179 PAIARGLGVAQYAAMTHIHV--GPAQLGVVDRVLGELGIARRISRVVPHVLVAPLLIADS 236 Query: 242 DLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNES 299 D + + L + ++ PLP L +++++ + D + + Sbjct: 237 DAVVTMSERLAQRALPGAEVAMLEPPVPLPPCTLSMAWHERHDADPAHRWLRDAVLRA 294 >UniRef50_C6B2W9 Transcriptional regulator, LysR family n=4 Tax=Rhizobiaceae RepID=C6B2W9_RHILS Length = 334 Score = 280 bits (717), Expect = 5e-74, Method: Composition-based stats. Identities = 60/313 (19%), Positives = 118/313 (37%), Gaps = 14/313 (4%) Query: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 M N DL + DLNLLV+FE + + + ++ + L ++PSA+S L RLR DPLF+++ Sbjct: 1 MLNHIDLSRIDLNLLVLFETVMEERHVGRSGQRLNLSPSAISHGLGRLRMLLGDPLFLKT 60 Query: 61 GKGIAPTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLI 117 KG+ PT L + L + + + + ++ F I P +S L+ Sbjct: 61 PKGVVPTDRAEELAAPIADILARVRSVVATAEPFDPAHSQRRFTIGAPDGVSSVFLPPLL 120 Query: 118 RCLRQ-DSSVEIECHDILMSA---------ENAEELLVHRKADLVITQMPVISRSVICMP 167 L + + I +L +A L R D+ I + Sbjct: 121 DLLAKFAPGIAISVRQLLPKQGEPSPDLAWRDALAALEARDMDIAIIPQAGFPIRFASLL 180 Query: 168 LHTIRNTLICSNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFR 227 L+ + HP + D T A + + + + +R+++ Sbjct: 181 LYEEDFVIAARQCHPFLIDQ-TLATYCAAQHLVVSHLGDTHGFVDNLLASHGCSRRVALT 239 Query: 228 GSSLLTIINSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNL 287 + + + +A TD + +P + + + PL + + K+++ + Sbjct: 240 VPNFMLALAVLAETDFISALPRRFVEMHAARFGVVSVNPPLPLGRFAINATAPKAAIRDE 299 Query: 288 VFSRFIDRLNESF 300 + + L S Sbjct: 300 GVAWLVRLLQASM 312 >UniRef50_Q081K6 Transcriptional regulator, LysR family n=2 Tax=Alteromonadales RepID=Q081K6_SHEFN Length = 326 Score = 279 bits (716), Expect = 6e-74, Method: Composition-based stats. Identities = 67/304 (22%), Positives = 131/304 (43%), Gaps = 9/304 (2%) Query: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 MA+ +++ DLNLL IFE +Y +++ A++SL+ITPSAVS +++RLR NDPLF+R Sbjct: 19 MADTKAIQQLDLNLLKIFEALYSEQNMTLASKSLFITPSAVSHAIKRLRLVLNDPLFVRQ 78 Query: 61 GKGIAPTTTGLNLHHHLEKNLRGLEQTIN---IVNKSELKKNFIIYGPQLISCSNNSMLI 117 G + PT + L L + Q + + ++ F I + + LI Sbjct: 79 GLQMQPTAACQRMAPQLISALNRIRQVLQQCGEFDPLTTEQTFKIAIHEALESQIMPTLI 138 Query: 118 RCLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLIC 177 + + + + + +S EN L + + DL I ++ + L + ++ Sbjct: 139 KQVVKLIP-HAKIASMSLSRENIARQLANGEVDLAIDVARAVNAPLAHKTLLSDPFCVLI 197 Query: 178 SNR----HPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLT 233 R H + T E + S+ G + + ++ +NR I +R S T Sbjct: 198 DRRQHAMHLEPSTKLTPTDYANAEHVAVSSRPIGRVMEDILLQQQGVNRHIKYRCQSYQT 257 Query: 234 IINSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFI 293 + + L+ +P + + +L + LP I ++ ++ ++ + F Sbjct: 258 AAKIVIGSPLMLTLPRSIAEQFI-HPDLHVCTMPFELPDIDTHLYWHMNTETDPAFVWLR 316 Query: 294 DRLN 297 ++ Sbjct: 317 AQIE 320 >UniRef50_D1RUJ7 Transcriptional regulatory protein n=1 Tax=Serratia odorifera 4Rx13 RepID=D1RUJ7_SEROD Length = 313 Score = 279 bits (716), Expect = 6e-74, Method: Composition-based stats. Identities = 45/295 (15%), Positives = 104/295 (35%), Gaps = 4/295 (1%) Query: 6 DLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIA 65 +N+L + + ++S AAE L + +S+ L +LR F DPL +R G+ Sbjct: 4 QFAALSINMLQVLHAVLTTRNLSHAAEKLNSSQPQLSRQLAQLREAFGDPLLVRHGREYV 63 Query: 66 PTTTGLNLHHHLEKNLRGLEQTIN--IVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQD 123 + G + LEK + L++ + F ++ L+ L+ Sbjct: 64 LSPRGQEIILPLEKLINELKELSQKPEFEPLLCSRCFRFASSDYVAEHMLPQLVDYLQTV 123 Query: 124 SSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPR 183 + ++ + LL + + DL T + + L + S RH Sbjct: 124 AP-KVSVEYFTWKPNDYP-LLANAELDLATTMIKEAPSGLRGRILGEDVPVCVMSARHVL 181 Query: 184 ITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDL 243 + + ++ I E+ E + R+++ + ++ ++L Sbjct: 182 AGKALEAKDYASWRHVRVSGGGDKDSFIDRELKEYGIYRQVALTVPFFSAAMEVVSSSNL 241 Query: 244 LGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 L +P + N+ ++ S + ++ +++ + F + + E Sbjct: 242 LVTIPKHIAIMMAGKYNVTWCSIDFVKESHRYWMIWHERTHMAPEHKWFRNVVRE 296 >UniRef50_Q210Z5 Transcriptional regulator, LysR family n=2 Tax=Alphaproteobacteria RepID=Q210Z5_RHOPB Length = 301 Score = 279 bits (716), Expect = 6e-74, Method: Composition-based stats. Identities = 49/296 (16%), Positives = 118/296 (39%), Gaps = 14/296 (4%) Query: 10 FDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTT 69 DLNLLV + + S++ AA + ++P A+S+ L R+R NDP+ +R+G+G+ T Sbjct: 10 LDLNLLVTLDALLSEGSVAGAANRMNLSPPAMSRQLARIRHLMNDPVLVRAGRGLVATPR 69 Query: 70 GLNLHHHLEKNLRGLEQTIN---IVNKSELKKNFIIYGPQLISCSNNSMLIRCL-RQDSS 125 + + + ++ E + ++ + +++ F I + + ++ + +Q + Sbjct: 70 AEAVRAQVRQLVQDAEGLVRGNADLDPATIERTFTIRSSDGFVGTFGAAIVELVVQQAPN 129 Query: 126 VEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRIT 185 + + + L + DL I + + + L R + HP Sbjct: 130 ARLRF---VGEGNEDVDSLRDGRVDLDIGVIDGMGPEIRLQTLFRDRYIGVVRADHPLAQ 186 Query: 186 DNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLG 245 + T E +A + + + + + M R +S +++ ++ ++ +D + Sbjct: 187 ETVTIENFVAYPHVSVSRRGRFEGPVDTALALQGMRRTVSVAVANVADGLSIVSRSDHIV 246 Query: 246 IVPYELYNSYRDFLNLKEIKLEH---PLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 ++P + YR +L LP I + +++ + + E Sbjct: 247 LLPGRIAAWYRRDF--HGFELPVVTDELPPISI--AWHPRFEKDAAHRWLRTCVRE 298 >UniRef50_Q5E7C7 Transcriptional regulator, LysR family n=5 Tax=Vibrionaceae RepID=Q5E7C7_VIBF1 Length = 330 Score = 279 bits (716), Expect = 7e-74, Method: Composition-based stats. Identities = 62/301 (20%), Positives = 115/301 (38%), Gaps = 4/301 (1%) Query: 2 ANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSG 61 N + K DLNLLV F + + S+S AA L++ SA+S SL RLR +DPLF R G Sbjct: 21 MNEINWKAVDLNLLVAFSTLMETKSVSLAANKLFVGQSAMSHSLSRLRELLHDPLFERQG 80 Query: 62 KGIAPTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIR 118 + PT + L+ + K L+ + I + SE F I + + Sbjct: 81 HQMIPTAKAIQLYPLVNKVLQTISGDILKVDTFEASEFTGTFKIGMTDYAELLFAADIFD 140 Query: 119 CLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICS 178 + Q + + + N ++ DLVI M + L+T ++ + Sbjct: 141 AIHQLAP-NAQLCFTTVDKANYQDRFDSEPLDLVIGSMKPELKEFQYQTLYTEKHVCMWD 199 Query: 179 NRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSI 238 + + T + ++ + A + E+ + R +S LTI + + Sbjct: 200 GQRHLFSSPITLDDYISLPHALVSPDGALKTGVDKELKALGVGRSVSVASKHFLTIRHLM 259 Query: 239 AVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 DL+ +VP + L + + + + + + N + + L + Sbjct: 260 KKRDLICVVPELMAQLDLFSEKLVHSEPPINVGEFDIQLIWQTRNKENKRYQWLKELLIQ 319 Query: 299 S 299 + Sbjct: 320 T 320 >UniRef50_Q7NT25 Probable transcription regulator protein n=1 Tax=Chromobacterium violaceum RepID=Q7NT25_CHRVO Length = 310 Score = 279 bits (714), Expect = 1e-73, Method: Composition-based stats. Identities = 54/295 (18%), Positives = 122/295 (41%), Gaps = 7/295 (2%) Query: 10 FDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTT 69 +LNLL E + + +++++A L +T SA+S+ L +LRAQF DPL +R G+ T Sbjct: 5 LNLNLLRSLEALLETRNLTRSAARLGLTQSAMSRHLVQLRAQFQDPLLLREGQRFVLTER 64 Query: 70 GLNLHHHLEKNLRGLEQTINI--VNKSELKKNFIIYGPQLISCSNNSMLI-RCLRQDSSV 126 L L+ L +EQ + S ++ F G ++ ++ R L Q + Sbjct: 65 AEELRLGLKAVLEQVEQLYQPPQFDPSACEREFSFAGSDYLAEYMLPDILDRVLPQAPGM 124 Query: 127 EIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRITD 186 ++ +LL ADL+ T + ++ L + + ++ HP Sbjct: 125 RLKFI---PWQAGRFDLLSDGAADLISTIADEVPDNIYGKSLGQDQPMCVMADNHPLHDK 181 Query: 187 N-STYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLG 245 + +A ++ S S + +++ ++R+I ++ ++ ++ + LL Sbjct: 182 PALERDDYLAWPHARVSSASDKDGFVDIQLARNGLSRQIRIATPYFVSALSIVSRSQLLL 241 Query: 246 IVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 +P L ++ ++ L + + ++ ++ + + F + + Sbjct: 242 TLPEHLAVRFQRQFPVRAKPLPFIDYTYRYWLLWHGRADKDPAHRWFRGHVFDVL 296 >UniRef50_Q7D3I0 Transcriptional regulator, LysR family n=1 Tax=Agrobacterium tumefaciens str. C58 RepID=Q7D3I0_AGRT5 Length = 316 Score = 279 bits (714), Expect = 1e-73, Method: Composition-based stats. Identities = 46/311 (14%), Positives = 112/311 (36%), Gaps = 12/311 (3%) Query: 2 ANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSG 61 + L DLNLL + + +++ A E + ++ A+S +L+R+RA D LF ++ Sbjct: 1 MQRFQLGSVDLNLLKVIYALVVKGNMTAAGEYIGLSQPAMSHALKRVRAITGDELFKKTS 60 Query: 62 KGIAPTTTGLNLHHHLEKNLRGLEQTIN---IVNKSELKKNFIIYGPQLISCSNNSMLIR 118 +G T + + + + E + + + + F I S L+ Sbjct: 61 RGFVMTRFCTEIFPAVRRIIEDTETVMLQRLAFDPATSHRAFRIGMNDYFSVVLMPRLVE 120 Query: 119 CLRQDS-SVEIECHDILMSAEN--------AEELLVHRKADLVITQMPVISRSVICMPLH 169 +R ++ +E + + + +E L D+ + C L Sbjct: 121 RVRSEAEHCVLEVIHMPRTGISHNRDFMPVVQEHLNEGTIDVAVMTAENFPARYRCASLF 180 Query: 170 TIRNTLICSNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGS 229 T R I S +P + T + +++ ++ S + I +D + R++ Sbjct: 181 TERRVCIMSANNPAAKEPLTLDALLSLGHVKVTSSPSRRGWIDERLDAMGLERRVVAVVP 240 Query: 230 SLLTIINSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVF 289 + ++ +DL+ ++P + + L ++ + + + Sbjct: 241 HFSAAVAIVSRSDLVAMMPESVAKLFERSHELLLLESPFEEEKQSTSMIWLAEKERDPAS 300 Query: 290 SRFIDRLNESF 300 ++++ F Sbjct: 301 LWLREQISACF 311 >UniRef50_B7VQV6 Transcriptional regulator n=10 Tax=Vibrionales RepID=B7VQV6_VIBSL Length = 315 Score = 278 bits (713), Expect = 1e-73, Method: Composition-based stats. Identities = 52/291 (17%), Positives = 109/291 (37%), Gaps = 5/291 (1%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 L +LNLL + + +S+ A+ L+IT SAVS+ L +LR DPL +R G + P Sbjct: 2 LGNINLNLLRSLHVLLEECHVSRTAQRLHITQSAVSRQLAQLRDLCGDPLLVRDGNKLVP 61 Query: 67 TTTGLNLHHHLEKNLRGLEQTIN--IVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDS 124 T L L L+ L + ++ + + + ++ ++ +++ + +D+ Sbjct: 62 TNRALLLKGKLDDLLGEFDHLLDDKPFDPQDWQGELVLASSDYVAQYILPIIVSEVSKDA 121 Query: 125 SVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRI 184 I + N E L L + P V + L ++ + HP Sbjct: 122 P-HINL-AYRLWQPNFLETLNESGIHLASSMFPKKPDHVSSIKLGEDKSVCLMRASHPLA 179 Query: 185 TD-NSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDL 243 + E I+ ++ + + ++ R+I+ + + N + D Sbjct: 180 KQSAISSEDIVNYSHIKVTGGGDKDSYSDIALKKQGHKRRIALQVPFFSSAGNVLMQDDY 239 Query: 244 LGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFID 294 L IVP + + L++ L ++ ++ N+ + Sbjct: 240 LMIVPEHIAYNLGRHLDVAYFSLPFETEMHTYWLMWHPKYDNDSAHKWARE 290 >UniRef50_B5ZVD7 Transcriptional regulator, LysR family n=4 Tax=Rhizobium RepID=B5ZVD7_RHILW Length = 321 Score = 278 bits (712), Expect = 2e-73, Method: Composition-based stats. Identities = 58/302 (19%), Positives = 109/302 (36%), Gaps = 4/302 (1%) Query: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 M N L+K DLNLL+ F + Q ++S+AA+ L + +S +L+RLR +D LF+R Sbjct: 2 MMNDATLRKIDLNLLLAFSVLMQERNVSRAADRLLLGQPGLSAALRRLRETLDDELFVRV 61 Query: 61 GKGIAPTTTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLI 117 G+G+ PT L++ +E L G+E+ I + + + F I + + L+ Sbjct: 62 GRGLQPTPRALSIAPAIEDALSGIERAIRPQADFDPASWQGEFRIGMCDNLESAFFGPLV 121 Query: 118 RCLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLIC 177 L Q S I +A L D ++ + I PL + I Sbjct: 122 ARLLQLSP-GARLIGIASEKRDAARRLDEGVFDFSVSVHDEPASWHIRAPLFNQASICIY 180 Query: 178 SNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINS 237 ++ + E + + I + R++ + + Sbjct: 181 DEAQLKLKAPLSLEDFANVAHVTVSFEGNASTSIDTALSRTGHVRRVVATVPRFSALPTA 240 Query: 238 IAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLN 297 + + +VP + L LP+ + + Y + + F Sbjct: 241 LRAMPAISVVPESIGRCMAQLHGLTICAPPLSLPADPVTMLYRRVDQADGRARWFRRLFL 300 Query: 298 ES 299 + Sbjct: 301 DV 302 >UniRef50_Q1M9F6 Putative LysR-family transcriptional regulator n=1 Tax=Rhizobium leguminosarum bv. viciae 3841 RepID=Q1M9F6_RHIL3 Length = 317 Score = 278 bits (712), Expect = 2e-73, Method: Composition-based stats. Identities = 54/302 (17%), Positives = 116/302 (38%), Gaps = 6/302 (1%) Query: 2 ANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSG 61 + L + DLNLL F+ + + S+++AA+ L T SA+S SL RLR F D LF R Sbjct: 1 MAEFSLNQIDLNLLRTFDVLMRERSVTRAADRLGRTQSAISHSLGRLRDVFKDDLFTREA 60 Query: 62 KGIAPTTTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIR 118 + PT L + + L + ++ + + +NF I + + LI Sbjct: 61 GIMEPTARAKELAEVISQALHEIRVAVDRHLNFDPTTTSRNFRIGLSDYTAVTYLPELIE 120 Query: 119 CLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRS-VICMPLHTIRNTLIC 177 + + + +A L +R+ + + P + + L R Sbjct: 121 NFSMLAP-NASLNVVHAREPDALGSLKNREVECAVLGNPKLDAEHFEVVELSRDRMVCAG 179 Query: 178 SNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINS 237 +P + D + ++ +A Q+ + + + + ++RK+ L Sbjct: 180 WTGNPAMAD-MSLDRYLASPHLQISADGIAAGVADITLQKLGLHRKVVATIPHYLVAPWV 238 Query: 238 IAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLN 297 I T+L+ + + + + LP + + + +++S+ + F + + Sbjct: 239 IKGTELISAFGDGVLLALSEESETAIVPPPLELPDVTISLIFDRSNELDPGHVWFRNLIK 298 Query: 298 ES 299 + Sbjct: 299 DV 300 >UniRef50_D2C014 Transcriptional regulator, LysR family n=1 Tax=Dickeya dadantii Ech586 RepID=D2C014_DICD5 Length = 303 Score = 277 bits (711), Expect = 2e-73, Method: Composition-based stats. Identities = 53/277 (19%), Positives = 95/277 (34%), Gaps = 8/277 (2%) Query: 25 LSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS--GKGIAPTTTGLNLHHHLEKNLR 82 +I+ AA L I+ A+S L RLRA F D LFI S G+G+ PT +L + L Sbjct: 22 QNITHAAARLGISQPAMSARLSRLRATFGDQLFIPSPHGRGVLPTPRAESLRPQIASVLH 81 Query: 83 GLEQTINI--VNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSVEIECHDILMSAENA 140 + + + + + F+I + + + L+ + + I L + Sbjct: 82 DISAMLEPIHFDAASSSRTFVIALHENPALMLGADLVNQFSEAAP-GIRLRFALPESARL 140 Query: 141 EELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRITDNSTYEQIMAEEFTQ 200 E L D+ I + I L HPR + + A Sbjct: 141 PEQLETGDIDIYIGVNAGAHDAWIRRKLFDDEFATAQRKGHPRGSAPLDLKSYCALPHLV 200 Query: 201 LISKSA-GVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLGIVPYELYNSYRDFL 259 + S+ + + R + S +A TDLL +P + + Sbjct: 201 VSSEGDPFTGFVDQTLAGLGYQRSVVMSTQSYAMAPPIVAGTDLLCTLPRRMLQRFTQT- 259 Query: 260 NLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRL 296 L PL I + + ++ + ++ +L Sbjct: 260 -LDIFDPPLPLQPIVISMYWHPKNSHDPANVWLRAQL 295 >UniRef50_C6BS61 Transcriptional regulator, LysR family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BS61_DESAD Length = 310 Score = 277 bits (711), Expect = 2e-73, Method: Composition-based stats. Identities = 62/301 (20%), Positives = 126/301 (41%), Gaps = 4/301 (1%) Query: 2 ANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSG 61 + + DLNLLVI + I+ S++ A L++T SAVS +L +LR F+D LF+R G Sbjct: 1 MSKTNSSNLDLNLLVILDTIFTERSLTLAGNKLFMTQSAVSHALSKLRHHFDDRLFVRRG 60 Query: 62 KGIAPTTTGLNLHHHLEKNLRGLEQTIN---IVNKSELKKNFIIYGPQLISCSNNSMLIR 118 + PT +H ++ +L+ + Q++ + + K+ F + + ++R Sbjct: 61 NIMEPTPLCKTIHQNIAPSLKAINQSLADRGEFDPASSKRTFSLGLSDYLCKLLLPEILR 120 Query: 119 CLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICS 178 + + + I + + E EE+L K D+ + V+ L R + Sbjct: 121 LIDSRA-LGISIRIMQTTYEKREEMLQSGKLDVFLGCPRNYGAGVLKEKLFEDREVCVVR 179 Query: 179 NRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSI 238 N HP + E++ EF L +G+ ++ + + + RKI I + + Sbjct: 180 NDHPIKGEVMNEEEMAENEFAALSLSESGLGFLEDYLYRKGVQRKIKIVLQQETVIPSLV 239 Query: 239 AVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 ++L+G + L Y L+ + + ++ ++ + N+ + E Sbjct: 240 ENSNLVGSIAQRLAEMYAAKGRLRIVHMPLENTEFEVSQHWHSLNDNDPAQQWIRSVIKE 299 Query: 299 S 299 Sbjct: 300 V 300 >UniRef50_A6FY23 Transcriptional regulator, LysR family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FY23_9DELT Length = 339 Score = 277 bits (711), Expect = 2e-73, Method: Composition-based stats. Identities = 51/285 (17%), Positives = 104/285 (36%), Gaps = 10/285 (3%) Query: 23 QHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTTGLNLHHHLEKNLR 82 Q S++ AA L ++ AVS +L RLR +F DPL +R+G+G+ T L + L Sbjct: 21 QTSSVTGAARRLGLSTPAVSHALARLRERFGDPLLVRAGRGMVLTPRAEQLRPRVRDALS 80 Query: 83 GLEQTIN---IVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSVEIECHDILMSAEN 139 + ++++F + + +R + ++ I+ + ++ Sbjct: 81 LATLVFEDPGAFEPASMERSFTLSMTDYVLRVFGGPFEARVRAAAP-GVDLRVIVNAVDD 139 Query: 140 AEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRI---TDNSTYEQIMAE 196 A E L DLV+ + + + + R + HP + T Q + Sbjct: 140 A-ERLRAGDTDLVVGIYGALPPELRTRAIISERLVCVVREAHPVLAPTKRRLTLRQFVTL 198 Query: 197 EFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLGIVPYELYNSYR 256 E Q+ + + + E R+++ + A +D L V + Sbjct: 199 EHVQIAPRGQPGGYVDDRLAELGHARRVARAVPFFQLALEMTASSDYLLTVSERIARQLG 258 Query: 257 DFLNLKEIKLEHP--LPSIKLYISYNKSSLNNLVFSRFIDRLNES 299 L L+ ++ L L + ++ + ++L ES Sbjct: 259 PELGLRVLEPPSELGLEPYALSMVWHPRFDADAGHRWLREQLVES 303 >UniRef50_Q471I4 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Ralstonia eutropha JMP134 RepID=Q471I4_RALEJ Length = 323 Score = 277 bits (711), Expect = 2e-73, Method: Composition-based stats. Identities = 59/296 (19%), Positives = 116/296 (39%), Gaps = 6/296 (2%) Query: 10 FDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTT 69 LN L++ + + S++KAA L +T A+S++L RLR F DPLF+R G + PT Sbjct: 12 LSLNQLLVLDVLLSERSLTKAARVLNLTQPALSKTLARLRQYFGDPLFVRVGLRMEPTPK 71 Query: 70 GLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSV 126 L L + L+ + + + +++F + + L+ L +++ Sbjct: 72 ALELADPVRGILQSVRALRSDHVGFDPRTSQRSFSFFLLDAGASQMLPPLLSRLAEEAP- 130 Query: 127 EIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRITD 186 I + A + + L + DL I P +++S+ L + HPR+ Sbjct: 131 GILVQAVNADATHLDIWLENGLVDLAIGSFPGLTQSIRRQLLWHETYGAVVRKDHPRLAQ 190 Query: 187 NSTYEQIMAEEFTQLISKSAGVDD--IQMEIDERFMNRKISFRGSSLLTIINSIAVTDLL 244 + +AE+ + + G I+ I+ + I R S T +D + Sbjct: 191 LGDLDAFVAEKHVLVSAVGTGHQHLSIERAIEAAVPHTNIICRVPSFATAGLIAKHSDAV 250 Query: 245 GIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 ++P L + L+L + LP + + ++ ++ F Sbjct: 251 AVLPLTLARALCKDLDLTVVMPPLTLPGMDIAQHWHDRVHREPGNQWIRALVHRLF 306 >UniRef50_A1R1P0 Putative transcriptional regulator, LysR family n=1 Tax=Arthrobacter aurescens TC1 RepID=A1R1P0_ARTAT Length = 314 Score = 277 bits (711), Expect = 2e-73, Method: Composition-based stats. Identities = 59/300 (19%), Positives = 118/300 (39%), Gaps = 8/300 (2%) Query: 3 NLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGK 62 N +L+K DLNLLV+F + Q +++AA L+IT AVS +L RLR F+DPLF +S Sbjct: 5 NETNLRKIDLNLLVVFHVLMQERHVTRAAAKLHITQGAVSAALGRLRLLFDDPLFQKSRT 64 Query: 63 GIAPTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLI-R 118 G+ PT L L + ++L+ + + + + F I + ++ Sbjct: 65 GMVPTAKALALAPRIGQSLKTVSDLVFQDEQFEPTTSNRTFHIAMSDDLEAVFVPKIVTE 124 Query: 119 CLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPV-ISRSVICMPLHTIRNTLIC 177 +R S+ ++ ++ +E L + DLV+ P + + L T + Sbjct: 125 AIR--SNWNVKFSFHQTNSVLWQEALDDPRMDLVMCATPPQVPAAYHHSVLFASSYTCLY 182 Query: 178 SNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINS 237 + ++++ + E ++ A + ++ + RK S + Sbjct: 183 DGQRMKLSEPLSLEDYAGSGHLRVSY-DAQRGFVDEILESQGYERKAVASISHFAGAVAV 241 Query: 238 IAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLN 297 + DL+ +P ++ D L + P+P + + + + Sbjct: 242 LRAADLIATIPTYTAKAFSDAAGLTMSQPPVPMPRFTISLIWEVPKETQPEHVWLRKMMQ 301 >UniRef50_A5VCH0 Transcriptional regulator, LysR family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5VCH0_SPHWW Length = 327 Score = 277 bits (711), Expect = 3e-73, Method: Composition-based stats. Identities = 61/318 (19%), Positives = 113/318 (35%), Gaps = 25/318 (7%) Query: 2 ANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSG 61 + DLNLL +F+ + + S++ AA L +TPSAVS SL RLR D LF+R Sbjct: 1 MTQIHFRSLDLNLLRVFDALTEEGSVTGAAGLLGLTPSAVSHSLNRLRHILKDDLFLRGA 60 Query: 62 KGIAPTTTGLNLHHHLEKNLRGLEQTI--NIVNKSELKKNFIIYGPQLISCSNNSMLIRC 119 KG+ PT L L + + L ++Q + + + + F I ++ +I Sbjct: 61 KGMNPTPKALALAVPIRRALVDIQQALNGDSFVPEKTDRRFSIACGDYVTAVLMPEVIAR 120 Query: 120 LRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSN 179 R+ + + + + L + DL + I + PL + Sbjct: 121 FRKAAPLA---ELRIQPVGAVMKELDAGRIDLAMGGFERIPERLASEPLFADDMVWVMRA 177 Query: 180 RHPRITDNSTYEQIMAEEFTQLISKSAGV--------------------DDIQMEIDERF 219 P T E + A + S + +ER Sbjct: 178 DSPFANRQPTLEGLAALPHLAIASPDNDRAVSGIVSDAGLERRVVRDDPRILDQYFEERG 237 Query: 220 MNRKISFRGSSLLTIINSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISY 279 + R ++ + + + +A DL ++P L ++ D L K HP ++ + Sbjct: 238 LRRTVAMTAPNPIVAMAIVAECDLAAMMPRNLAEAFADRYKLALWKPPHPSALFQISTVW 297 Query: 280 NKSSLNNLVFSRFIDRLN 297 ++ + + Sbjct: 298 HRWHGDQPAVDWLRAMIR 315 >UniRef50_Q0BYJ0 Transcriptional regulator, LysR family n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0BYJ0_HYPNA Length = 297 Score = 277 bits (710), Expect = 3e-73, Method: Composition-based stats. Identities = 60/298 (20%), Positives = 107/298 (35%), Gaps = 8/298 (2%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 +L+ DLNLL + E IY S+++A+E L+IT AVS +L RLR F DPLF+R G+G+ Sbjct: 1 MNLRSLDLNLLPVLEAIYAERSLTRASEVLHITQPAVSNALSRLRLHFEDPLFVREGRGV 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 PT L + ++L L + S + F I + + R L Sbjct: 61 KPTAMTEALMPAIRESLDKLRNGLEPRSVFEPSRSTRVFNISSRDASAHILAPPIARRLE 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 + + L + DL I + + + L + + ++ H Sbjct: 121 VQAP-GVRISWSQPQRSAIASELASGRLDLAIDVQDLRGADLERVLLSSTKYVCALASDH 179 Query: 182 PRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVT 241 P + T ++ + + S+ G I+ R + + T Sbjct: 180 PLANEPLTLDKFFSMRHIAVSSRREGRSLIEEMARSLGHRITPVHRLPHYQPALEVVRCT 239 Query: 242 DLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNES 299 L P + L +KL PS + +++ + + + Sbjct: 240 HLALAAP----QPVTEGSGLAVMKLPFDFPSPGSMLYWHREYAQDPALMWLRGLIRDV 293 >UniRef50_A3RSL5 Transcriptional regulators, LysR family n=4 Tax=Ralstonia solanacearum RepID=A3RSL5_RALSO Length = 304 Score = 277 bits (709), Expect = 4e-73, Method: Composition-based stats. Identities = 64/297 (21%), Positives = 120/297 (40%), Gaps = 9/297 (3%) Query: 8 KKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPT 67 K+ DLNLL +F+ IYQ +++ AA+ IT A+S +L RLR F DPLF+ S G+ PT Sbjct: 4 KRLDLNLLGVFQAIYQTRNVTLAAKRHNITQPAMSNALARLREVFADPLFVPSPYGMRPT 63 Query: 68 TTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDS 124 L +++ LR +EQ + + + + + F ++ + L+ LR + Sbjct: 64 PYAQQLAVPIDRALREVEQALAMSKGFDPASSDREFRMHLTDFAQVAFLPALLERLRALA 123 Query: 125 SVEIECHDILMSAENAEELLVHRKADLVITQM-PVISRSVICMPLHTIRNTLICSNRHPR 183 + ++ E L + D +M + V L R ++ HP Sbjct: 124 P-RVVIRVEALAEETILPALDEGRLDFAFGRMSKAAGQGVGRYTLFKDRYAVLMRAGHPL 182 Query: 184 ITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDL 243 + + A + + I+ + + I+ R S L + + +DL Sbjct: 183 AGHALSRKDFAAAGQALICTSG--HRAIEDVLVKMGA--HIALRLPSFLVVSRIVETSDL 238 Query: 244 LGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 + IVP L L +P+ + + +++S + + +L + F Sbjct: 239 MVIVPARLAEQCAATGLFHTAALPVAMPAFDVSLFWSESRSADPAHAWMRGQLQQLF 295 >UniRef50_Q5E2I6 DNA-binding transcriptional activator n=65 Tax=Gammaproteobacteria RepID=Q5E2I6_VIBF1 Length = 323 Score = 277 bits (709), Expect = 4e-73, Method: Composition-based stats. Identities = 62/293 (21%), Positives = 129/293 (44%), Gaps = 5/293 (1%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 L+ DLNLL +F+ + Q +I++AA++L ++ AVS ++ RL+ FND LFIR G+GI P Sbjct: 18 LRGVDLNLLTVFDAVMQEQNITRAAQNLGMSQPAVSNAVSRLKLMFNDELFIRHGRGIQP 77 Query: 67 TTTGLNLHHHLEKNLRGLEQTI--NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDS 124 T L + + L+ ++ + + + + F + +++ ++ + Sbjct: 78 TQRARQLFAPMRQALQLVKNELPSSTFSPETSMRQFKLSICSPSDIRFAPRIMKDIQNKA 137 Query: 125 SVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRI 184 I + + L +++ D VI + + L T ++ S HPR+ Sbjct: 138 P-HISLKLSGEHEPDIAQKLRYQEVDFVIDYVRFDEPGFMSTELFTDELVVVASVNHPRL 196 Query: 185 TDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLL 244 + EQ+ +E+ + + + +++G+S+ I+ ++ ++L+ Sbjct: 197 QNGINKEQLASEKHAVPARIANTKGFADHLYVDSLYEQ--AYKGASISNILYVVSQSELI 254 Query: 245 GIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLN 297 + P L NS + L + L I Y+S++ S + D+L Sbjct: 255 TVAPKWLVNSMPNRDQLMVLPLPIESKGISGYLSWHDSYQKDKGHIWMRDQLM 307 >UniRef50_B7VQ45 Transcriptional regulator n=8 Tax=Vibrionales RepID=B7VQ45_VIBSL Length = 311 Score = 276 bits (708), Expect = 5e-73, Method: Composition-based stats. Identities = 67/311 (21%), Positives = 126/311 (40%), Gaps = 16/311 (5%) Query: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 M ++ L K D+NLL+ + + S+SK AE L+++ SAVS+ L +LRA F+DPLF R Sbjct: 1 MVDVKSLLKCDMNLLLCLHVLIEERSVSKTAERLFLSQSAVSKQLTKLRALFDDPLFERE 60 Query: 61 GKGIAPTTTGLNLHHHLEKNLRGLEQTI--NIVNKSELKKNFIIYGPQLISCSNNSMLIR 118 KG+ PT L L + + L +E+ + + + ++ F I + + + Sbjct: 61 SKGLFPTPKALALAPKIHQILLQIEKLTVPEVFDPKDSERTFTIDLVETAYTAIYPHFMP 120 Query: 119 -CLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMP----------VISRSVICMP 167 L + I + + ++ + L+ R+ D I I + + Sbjct: 121 TALADAPHITI---NSSTWSSDSFKRLLKREVDFGIGIFELDERASTHVQCIPDELDYVE 177 Query: 168 LHTIRNTLICSNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFR 227 L + + N HP + + + QL++ AG + ++ + + + Sbjct: 178 LCLDYSVCLMRNDHPALQEEWNLGTFLKYRHIQLVTGGAGDWLLMEVLNSKQLEINKAAN 237 Query: 228 GSSLLTIINSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNL 287 S + + I +DLL PY Y D L + L L++ ++K + Sbjct: 238 VSDITSAIKLCKQSDLLMCYPYNSVRDYIDSGELVMKPVPVDLVPGGLFLLWHKYFDSEP 297 Query: 288 VFSRFIDRLNE 298 D + E Sbjct: 298 SHKWLRDLIIE 308 >UniRef50_A2SDX3 Transcriptional regulator, LysR family n=6 Tax=Burkholderiales RepID=A2SDX3_METPP Length = 326 Score = 276 bits (707), Expect = 7e-73, Method: Composition-based stats. Identities = 67/310 (21%), Positives = 117/310 (37%), Gaps = 12/310 (3%) Query: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 M+ K +L+L+ + + S+S+AA L T AVS L+RLRA DPL +RS Sbjct: 1 MSQPTLFDKIELHLVRVLHTVITERSVSRAALRLRTTQPAVSAQLKRLRALVGDPLLVRS 60 Query: 61 GKGIAPTTTGLNLHHHLEKNLRGLEQTIN------IVNKSELKKNFIIYGPQLISCSNNS 114 G G+APT L L + LR E+ + + + F + + Sbjct: 61 GTGMAPTAVALQLLEPAAELLRNAERLFGSRAEALAFDPAHSETTFRVAASDYLDPQFLP 120 Query: 115 MLIRCLRQDSSVEIECHDILMSAE-NAEELLVHRKADLVITQMPVISRSVICMPLHTIRN 173 L+ LR ++ I + +SAE + + L + DLVI + L + Sbjct: 121 ALVTRLRAEAP-GIRVEVLPLSAEFDYRKGLARGEVDLVIGNWLRPPAELHLGRLLSDEI 179 Query: 174 TLICSNRHPRITDN--STYEQIMAEEFTQLIS-KSAGVDDIQMEIDERFMNRKISFRGSS 230 + + HP + T E+ +A E I +D + R I R Sbjct: 180 VCLVAEDHPAVKSPRSWTAERYLASEHIAPTPLHPGARGVIDEHLDALGLARDIVVRSPY 239 Query: 231 LLTIINSIAVTDLLGIVPYELYNSYRDFL-NLKEIKLEHPLPSIKLYISYNKSSLNNLVF 289 +A + L+ + Y L L+ ++ P P++ Y +++ S + Sbjct: 240 FGLGPQMVAHSRLVLTTGRLFCSRYVGQLPGLRIVRCPVPFPALVYYQLWHELSHQSAAG 299 Query: 290 SRFIDRLNES 299 + + Sbjct: 300 RWLRGVMRDV 309 >UniRef50_A0K340 Transcriptional regulator, LysR family n=1 Tax=Burkholderia cenocepacia HI2424 RepID=A0K340_BURCH Length = 303 Score = 276 bits (707), Expect = 7e-73, Method: Composition-based stats. Identities = 48/297 (16%), Positives = 113/297 (38%), Gaps = 7/297 (2%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 + DLNLLV + + I++AAE L ++ SA+S L +LR F+D L + G+ + Sbjct: 1 MRFNRLDLNLLVTLDALLDDRRITRAAERLNLSQSAISGMLAKLREYFDDELLVPVGRNL 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTIN---IVNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 T L + L ++ + + +++F I + LI + Sbjct: 61 ELTPLARELVQPVRDLLLQVQTIVAIDPAFEPANARRHFKIATSDYVINVLMHRLIPVIE 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 + LM E+A E L + D +I P + + L + N + Sbjct: 121 PLAPY---LTLELMPQEDAPERLRRGEYDFLIIPEPFKADDHPAIALFDDSYVGVVWNGN 177 Query: 182 PRITDNSTYEQIMAEEFTQLISKSAGVDDIQ-MEIDERFMNRKISFRGSSLLTIINSIAV 240 + + + + + + ++ + + R++ S ++ + Sbjct: 178 RAVGASIDVARYEQLDHVATLLGWPRLPSYDSRYVEAQGIRRRVRVTTSDFTSMAPVLIG 237 Query: 241 TDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLN 297 T ++ + L + L+ ++LE P+P ++ ++ +++ + +++ Sbjct: 238 TQMIATMHRRLATELTRRMPLRLVELEFPIPQMREFLQWHEYREKDPCHRWLREQII 294 >UniRef50_B5JUQ0 Transcriptional regulator, LysR family, putative n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JUQ0_9GAMM Length = 300 Score = 276 bits (707), Expect = 7e-73, Method: Composition-based stats. Identities = 64/295 (21%), Positives = 129/295 (43%), Gaps = 4/295 (1%) Query: 6 DLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIA 65 +L+ DLNL +FE I + S++ AA L ++ A S +L+RLR D LF+R+ +G+ Sbjct: 4 NLRSVDLNLFPVFEAIMEQGSLNMAACHLGMSQPAASAALKRLRLTIKDELFVRTRRGLE 63 Query: 66 PTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQ 122 PT L L+ + L L + N + ++ F + G L+ LR+ Sbjct: 64 PTARALELYPVVHHLLESLRGEMERANQFDPLFCERIFKVAGGDYFDMVFMGRLMNMLRE 123 Query: 123 DSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHP 182 + +++ ++ + + L+ K DL + I+ + + L +++ + HP Sbjct: 124 SAP-KVQVESVIHGFQESLNLIQRGKLDLCLHYDKEIAHELPTLKLFEESMSVLMAADHP 182 Query: 183 RITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTD 242 + +A E L S + + + + NR + R SS+ +++ +I + Sbjct: 183 YADKQLSLSDYIALEHVVLPKLSGNANQLDVILGGFNENRCVRARVSSVSSMVMAIKQSY 242 Query: 243 LLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLN 297 L+G +P + + + +L P I +Y+S+ S + V F + + Sbjct: 243 LIGTIPTRMASILCEGYDLVFKPFPKEAPPIPIYLSWAPFSDKDSVHRWFRNMIA 297 >UniRef50_Q399F7 Transcriptional regulator, LysR family n=1 Tax=Burkholderia sp. 383 RepID=Q399F7_BURS3 Length = 313 Score = 276 bits (706), Expect = 8e-73, Method: Composition-based stats. Identities = 51/292 (17%), Positives = 106/292 (36%), Gaps = 5/292 (1%) Query: 10 FDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTT 69 D +LL I + S+S+ AE L + +S +L+RLRA DPL +RSG + PT+ Sbjct: 6 IDAHLLKILHTLITESSVSRTAELLGQSQPTISVALRRLRAITGDPLLVRSGSRMVPTSH 65 Query: 70 GLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSS- 125 + L L++ L G+ +N + + + F I P + ++ + ++ Sbjct: 66 AMTLVEPLDQALAGIAAVLNPASTFDPATTHRTFRIGSPDYLDVFFLPAIVDAFKHEAPG 125 Query: 126 VEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRIT 185 IE ++ E L DL + + + PL + + H Sbjct: 126 ARIEFQHLMTVDGGYEHALESGSLDLAVGNWSTPPQQLHLQPLCRDDLVCVMRDDHRIRR 185 Query: 186 DNSTYEQIMAEEFTQLISKS-AGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLL 244 T + + + + G+ I E+ ++R ++ + ++LL Sbjct: 186 GQLTADVYREADHLGVTTHHATGLGTIDRELARGGLSRNVTTTMPYFGMAPYVLMRSNLL 245 Query: 245 GIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRL 296 L + L L+ + ++ Y ++ + + + Sbjct: 246 FTTTRTLATHFCSLLPLRIEPIPCEPQALTYYQLWHDRTHRSAAAVWLRRLV 297 >UniRef50_A6CYZ8 Hypothetical transcriptional regulator, LysR family protein n=1 Tax=Vibrio shilonii AK1 RepID=A6CYZ8_9VIBR Length = 304 Score = 276 bits (706), Expect = 9e-73, Method: Composition-based stats. Identities = 52/295 (17%), Positives = 106/295 (35%), Gaps = 5/295 (1%) Query: 9 KFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTT 68 K +LNLL E + +S+AAE L +T SAVS+ L +LR ++DPL +R+G T Sbjct: 4 KTNLNLLYTLEVLLAEKHVSRAAERLNLTQSAVSRQLSQLRDIYHDPLLVRNGNHYVLTP 63 Query: 69 TGLNLHHHLEKNLRGLEQTI--NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSV 126 L LE + + + + + + F ++ L+ L + Sbjct: 64 RAERLGAELEDLFQNITKVLGQADFDPLLFDQTFTFSSSDYVAQYILPELVELLSSLAP- 122 Query: 127 EIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRIT- 185 ++ + + L L T +P + + ++ HP Sbjct: 123 TMQF-AYRLWEPDNLAKLSEIDVQLASTMLPEAPLGLSSQQIGEDIPVIVTRKNHPLSGT 181 Query: 186 DNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLG 245 T +++ A ++ + E+ R + R+I + + TD L Sbjct: 182 KTITEQELGAYPHIRISGGGDKDSFLDREMKARSLKRRILVSTPFFSSAFALLQQTDALL 241 Query: 246 IVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 VP + + + L I + +P+ K ++ ++ + + + Sbjct: 242 TVPLHIAVNLKKTQKLHVIDIPFTVPTYKYWLIWHPKYDHEPAHIWTREHVLSIM 296 >UniRef50_B7QWJ8 Transcriptional regulator, LysR family n=1 Tax=Ruegeria sp. R11 RepID=B7QWJ8_9RHOB Length = 320 Score = 276 bits (706), Expect = 1e-72, Method: Composition-based stats. Identities = 54/304 (17%), Positives = 111/304 (36%), Gaps = 9/304 (2%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 + DLNLL + + ++ S KA L ++ SAVS +L RLR NDPLF+R G + Sbjct: 1 MNFATLDLNLLRVLDAVFAEGSTVKAGRRLGLSQSAVSGALSRLRHALNDPLFVRQGNQL 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 T +L H L L LE ++ + + F I L L Sbjct: 61 VATEFAESLRHDLRAELDRLETLLSPPSHFDPATASGLFRISAADFFCDMLMPRLGDLLS 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 + + I + + + E L ++ADL + + ++ PL ++ + Sbjct: 121 RKAP-GIRAQLLDLVPRHHVESLERQQADLALLPDTDLPDWMMREPLFRSEYAVLARRGN 179 Query: 182 P-----RITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIIN 236 P R + ++ + + + R++ + Sbjct: 180 PATKDLRHGERMPFDLFCSLPHVLFAPHGDLTAQSDEALAKVGRRRRVVMTVPVFSGVCR 239 Query: 237 SIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRL 296 ++ +DL+G++P +L + L + I+L +++ + + + ++ Sbjct: 240 VVSESDLIGLLPLQLARKVQPVYGLDLFVPPIAIDPIQLIGVWHRKADTAPMAAWMRQQI 299 Query: 297 NESF 300 + Sbjct: 300 FDIL 303 >UniRef50_Q15TE0 Transcriptional regulator, LysR family n=4 Tax=Alteromonadales RepID=Q15TE0_PSEA6 Length = 307 Score = 275 bits (705), Expect = 1e-72, Method: Composition-based stats. Identities = 62/298 (20%), Positives = 131/298 (43%), Gaps = 6/298 (2%) Query: 2 ANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSG 61 N+ K DLNL +I +YQ SI+ A + L+++ AVS +L RLR ++ DPLF+R G Sbjct: 1 MNMLH-SKIDLNLFLILVAVYQEGSITGAGKRLHLSQPAVSHALSRLRDKYQDPLFVRHG 59 Query: 62 KGIAPTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIR 118 + + T + + ++ LE T+ + + ++ ++ L Sbjct: 60 RKMIATQLCQTIMPRVLSSVAELESTLHDIGDFDVHQYQREMKFGFRDILESIFFPELAT 119 Query: 119 CLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICS 178 L ++ I H +S + E L + D+VI + S + + +LIC Sbjct: 120 DLMANTP-NITVHSRQVSRLDMEAALESQALDIVIDVLTPTSNDIHHTLICDEHFSLICR 178 Query: 179 NRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSI 238 HP ++D + + E + K + V+ + M + + + RK + + + I Sbjct: 179 KGHPILSD-MSLANYIKAEHALVTFKDSAVNTVDMALAKHAVARKFALKCEHYFAATSVI 237 Query: 239 AVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRL 296 + D+L +P + + ++ + L +P + +++ ++K + ++ + S +L Sbjct: 238 SRCDMLLTMPNAYARLLKQQMPVEVVPLPFEVPILPVHMYWHKQAEHDPLNSWMRQKL 295 >UniRef50_Q7WJY9 Probable LysR-family transcription regulator n=1 Tax=Bordetella bronchiseptica RepID=Q7WJY9_BORBR Length = 329 Score = 275 bits (704), Expect = 2e-72, Method: Composition-based stats. Identities = 60/298 (20%), Positives = 119/298 (39%), Gaps = 6/298 (2%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 + D+ LL + S+S+ A+ L ++ AVS +L RLR F+DPL +RS G+ P Sbjct: 22 MDNIDIKLLRTLLVLMSERSVSRTADRLDVSQPAVSHALARLRILFDDPLLLRSRAGMVP 81 Query: 67 TTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQD 123 T + + + L + + S +++F++ P+ + R LR Sbjct: 82 TDRASEIEARVRRLLAEYDALAHRPQPFDPSVSERHFVLSAPEYAEHLLMPPIFRHLRAH 141 Query: 124 SSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPR 183 + I E A ELL + DL I + ++S+ M L R I HP Sbjct: 142 AP-NIRVEVRAPDPERAYELLESGEVDLRIAWLRKPAQSLRSMQLFQDRIVCIADRDHPA 200 Query: 184 ITDNSTYEQIMAEEFTQLISKSAGVD--DIQMEIDERFMNRKISFRGSSLLTIINSIAVT 241 + + + + + I ++ F + LTI +I + Sbjct: 201 LDGTLSLADFLRYPHARPWGMGRNMSGRVIDEAVELLGKKLAPPFLVQNFLTIPYTITGS 260 Query: 242 DLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNES 299 DLL ++P L ++ ++ +++ LP ++ +++ S ++ + ++ Sbjct: 261 DLLAVLPLVLARAFAAQQPIQILEVPLRLPRMRYGAYWHERSHKDVGHKWLRSVVLQA 318 >UniRef50_C9PC13 Transcriptional regulator LysR family n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PC13_VIBFU Length = 310 Score = 275 bits (704), Expect = 2e-72, Method: Composition-based stats. Identities = 58/303 (19%), Positives = 112/303 (36%), Gaps = 8/303 (2%) Query: 4 LYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKG 63 + DLNL+ +F +Y+ S+ A+ L I+ SA S SL RLR++ ND LFIR Sbjct: 1 MKKFDNIDLNLMKVFYYVYETQSVQMTADRLNISQSACSHSLARLRSRLNDELFIRINGK 60 Query: 64 IAPTTTGLNLHHHLEKNLRGLEQTIN---IVNKSELKKNFIIYGPQLISCSNNSMLIRCL 120 + PT L ++ L L +N + + + +F+I G + L L Sbjct: 61 MIPTNQAEQLAQSIQPALELLYSGLNTATPFDPAVGQHHFVISGYDFSAWCVMPTLTAYL 120 Query: 121 RQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVI--SRSVICMPLHTIRNTLICS 178 + I + + E L + DL + S + + + + Sbjct: 121 AEH-FPNITVRLVQSDKQIPTEHLESGEIDLSLGFDHEAEQSNHIGNAIWQSGQYCIAMD 179 Query: 179 NRH--PRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIIN 236 N+H + +A + + + + + R+++ S+L+ Sbjct: 180 NQHDALMAGRPLDLDTFLAYPHVLVTPWNEPRGIVDATLGKLNKKRQVAVTLPSVLSAPF 239 Query: 237 SIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRL 296 + T+ P + D L L + P+P + + ++K + + I RL Sbjct: 240 LLKGTNYFLAAPESYLETLADTLQLAFVAPPIPIPQYHIKLYWHKVREKDPKVNWLIHRL 299 Query: 297 NES 299 + Sbjct: 300 CDL 302 >UniRef50_Q7MQI2 Transcriptional regulator n=36 Tax=Gammaproteobacteria RepID=Q7MQI2_VIBVY Length = 321 Score = 274 bits (703), Expect = 2e-72, Method: Composition-based stats. Identities = 57/290 (19%), Positives = 108/290 (37%), Gaps = 4/290 (1%) Query: 11 DLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTTG 70 DLNLLV + + S+SKAA L ++ SA+S+ L RLR DPLF R G+ + PT Sbjct: 18 DLNLLVALRVLIEESSVSKAAVRLNLSQSAMSRVLGRLRDLLGDPLFTREGQHLLPTEKA 77 Query: 71 LNLHHHLEKNLRGLEQTINI--VNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSVEI 128 L + L + L L Q ++ + + F I + + + Q++ + Sbjct: 78 LEIDRALGEPLESLRQLLSPSEFDPHLCTQTFTIATTDYAMQTILPFALPRIYQEAP-NV 136 Query: 129 ECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRITDNS 188 H + + + + L + ADL I + + L + + S +HP Sbjct: 137 SFHFLPLQHDRLADQLTYEGADLAICRPTGPVEPLRSEVLGRVGVLCLLSKQHPLAGKEM 196 Query: 189 TYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLGIVP 248 + + + I+ + ++ RK+ R L + + L+ VP Sbjct: 197 SLADYLYYPHAMIAISDGVKALIEQALVDQ-PQRKMVLRAYHLEAALAIVDTMPLIITVP 255 Query: 249 YELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 +L + +L L + ++ ++ + E Sbjct: 256 ADLAYLVAERYDLVVKALPFQFTPFDYSMIWHPRCEHSPAQEWLRSVVRE 305 >UniRef50_Q2SHJ0 Transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SHJ0_HAHCH Length = 291 Score = 274 bits (703), Expect = 2e-72, Method: Composition-based stats. Identities = 58/297 (19%), Positives = 115/297 (38%), Gaps = 11/297 (3%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 +L+ DLNLLVI + + +++AA+ L+++ A S +L+R R F DPL IR + Sbjct: 1 MNLRGVDLNLLVILDALLDERHVTRAAKRLHLSQPATSSALERCRHLFGDPLLIRGRGEM 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTINIVN--KSELKKNFIIYGPQLISCSNNSMLIRCLRQ 122 + +L ++ L E+ IN + +EL++ I + L + L Sbjct: 61 RLSAKAESLREPIKALLTQAERVINQADTPLAELRQTIRILMADFPVSALLGPLHQRLIT 120 Query: 123 DSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHP 182 + A++A E L +ADL ++ P + S C+ L ++ HP Sbjct: 121 SAPNLDLIVQPWHGAKSALEQLAKGEADLAVSVFPNVGASFRCVELLYEDYCVLMRKDHP 180 Query: 183 RITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTD 242 N +Q +A + + + + R + R++ D Sbjct: 181 AAQ-NFNLQQWLAYPHVLVSGRGDADSPVDQTLQARGLRRRVGLVVPYFQMAP------D 233 Query: 243 LLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNES 299 L+ ++P D P+ L+++++ + S ++ + E Sbjct: 234 LIALLPTHCVPQ--DTTKFTVFPPPIPVEGFPLHLAWHVRKHGDQAVSHVVEVIREV 288 >UniRef50_B6RAE8 Transcriptional Regulator, LysR family n=1 Tax=Pseudovibrio sp. JE062 RepID=B6RAE8_9RHOB Length = 307 Score = 274 bits (703), Expect = 2e-72, Method: Composition-based stats. Identities = 58/304 (19%), Positives = 124/304 (40%), Gaps = 8/304 (2%) Query: 2 ANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSG 61 +L+ DLNLLVI E + + +S AA L+++ AVS++LQRLR NDPL +R Sbjct: 1 MRQVNLRGVDLNLLVILEKLLETRHVSLAATQLHMSQPAVSRALQRLRDLLNDPLLVRIA 60 Query: 62 KGIAPTTTGLNLHHHLEKNLRGLEQTIN--IVNKSELKKNFIIYGPQLISCSNNSMLIRC 119 T + L L ++ I + + ++ GP+L L++ Sbjct: 61 GDYELTERAAEIQRLLPSVLATIQDVIAKPEFDPATAQETIRFSGPELEVNLYGPPLLKR 120 Query: 120 LRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISR--SVICMPLHTIRNTLIC 177 ++Q++ ++ ++ + N E L + +A V++ + + + L + Sbjct: 121 MKQEAP-GMKL-ELKSNIRNQFEPLENGEAHFVLSGQEPSAATSQLHRISLGRFSYVCLM 178 Query: 178 SNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINS 237 S HP + +A++ ++ +G I ++ R ++ + S ++ Sbjct: 179 SKDHPLAGKPISLNDYLAQDHISVMITGSGQSIIDEKLAAMGRKRNVAVKIGSFFAAMHF 238 Query: 238 IAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSI--KLYISYNKSSLNNLVFSRFIDR 295 TDLL +VP + N + L + ++ +++ ++ + Sbjct: 239 CGQTDLLFLVPSIFDKKIYEGHNTIASPVPDFLKDHHQEFFLYWHECYHHDPMIQWTRTL 298 Query: 296 LNES 299 + E+ Sbjct: 299 MKET 302 >UniRef50_A8KZI9 Transcriptional regulator, LysR family n=4 Tax=Actinomycetales RepID=A8KZI9_FRASN Length = 310 Score = 274 bits (703), Expect = 2e-72, Method: Composition-based stats. Identities = 63/303 (20%), Positives = 119/303 (39%), Gaps = 7/303 (2%) Query: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 M + DLNLLV + + + S++ AA L +T SAVS++L RLR +DP+ +R+ Sbjct: 1 MHAMQSTSSLDLNLLVALDALLEERSVNAAARRLRLTESAVSRALGRLRRAMDDPVLVRA 60 Query: 61 GKGIAPTTTGLNLHHHLEKNLRGLEQT---INIVNKSELKKNFIIYGPQLISCSNNSMLI 117 G + PT L + + + I + + L + F I ++ + L+ Sbjct: 61 GHRMVPTPRALAVQAEVHALVERAHAVFTPIREPDLATLARTFTILASDALTTAIGVDLL 120 Query: 118 RCL-RQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLI 176 L R V + + ++ L ADL I + S + L + + Sbjct: 121 DRLTRDAPGVRVRFLPEPSATDDP---LRDGTADLEIGDIDSTSPEIHIEVLGEEQALAV 177 Query: 177 CSNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIIN 236 HP T E++ A + + + R + R ++ S + Sbjct: 178 VRAGHPLTRGRLTPERLAAARHVTASRRGRFAGPLDEVLAARGLRRTVAVSVPSHSAALL 237 Query: 237 SIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRL 296 +A +DL+G+VP L D L L + L LP++ + +++ + + Sbjct: 238 LVAGSDLVGLVPARLGRGLLDSLGLVALDLGLDLPTLTIAQAWHPRYEADAPHRWLRGHV 297 Query: 297 NES 299 ++ Sbjct: 298 RDT 300 >UniRef50_C5CV67 Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus S110 RepID=C5CV67_VARPS Length = 300 Score = 274 bits (702), Expect = 3e-72, Method: Composition-based stats. Identities = 58/302 (19%), Positives = 112/302 (37%), Gaps = 7/302 (2%) Query: 2 ANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSG 61 +L + DLNLL + + + +S+AA+ L++ AVS +L RLR DPL +R G Sbjct: 1 MKPIELSRIDLNLLTVLAALMRERHVSRAAQRLHLGQPAVSHALARLRELTGDPLLVRQG 60 Query: 62 KGIAPTTTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIR 118 + + PT L L L L +E T + F I + + L+R Sbjct: 61 RVMEPTERALALMQGLGPALEQIEATFRAQADFEPARAAPVFRIGLTDDLQIAMLPRLLR 120 Query: 119 CLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICS 178 L ++ + + NA L + V+T + + + T R L+ Sbjct: 121 ALSVEAP-RARLVTLTVCYRNAARYLDEGQVSAVMTFLKDLPAGAKIRKVRTARFALL-R 178 Query: 179 NRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSI 238 T + + + ++E R+++F ++ + Sbjct: 179 AD--TAAARLTLDDYCRRRHVLVTYAGDLCGTVDETLNELGRQREVAFSVPQFGSLPAVL 236 Query: 239 AVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 A T+LL VP + + L+ L PS ++ +++ + + + + Sbjct: 237 AGTELLATVPEHVALALSAQGGLRCEALPFESPSYQIKLAWRAVTDKDAAETWLRRAMLR 296 Query: 299 SF 300 +F Sbjct: 297 AF 298 >UniRef50_Q7MCZ8 Transcriptional regulator n=13 Tax=Vibrionaceae RepID=Q7MCZ8_VIBVY Length = 313 Score = 274 bits (702), Expect = 3e-72, Method: Composition-based stats. Identities = 42/281 (14%), Positives = 99/281 (35%), Gaps = 5/281 (1%) Query: 23 QHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTTGLNLHHHLEKNLR 82 + +S+AA+ L+IT SA+S+ L +LR +DPL +R G + T L L + L Sbjct: 18 EECHVSRAADRLHITQSAMSRQLAQLRELCSDPLLVREGNRLVATPHAEALRPKLVQLLS 77 Query: 83 GLEQTIN--IVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSVEIECHDILMSAENA 140 E + N + + ++ ++ L R L + + + L + Sbjct: 78 EFEHLFDHQAFNPQDWQGQLVLSSSDYVAQFIVPTLSRVLIEQAP-RLTLSYRLWQPQYL 136 Query: 141 EELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRITD-NSTYEQIMAEEFT 199 + LL L T +P + + + + + HP + E ++ Sbjct: 137 DSLLDTG-IHLASTMLPSPPKELSYTKIGEDYSVCVMRQGHPLSGKAALSLEDMLRYSHI 195 Query: 200 QLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLGIVPYELYNSYRDFL 259 ++ + + R I+ + +N + +D + +VP + + Sbjct: 196 KVTGGGDKDSATDSVLRKLGKTRHIALQVPFFSAAVNVLIQSDYMMVVPEHIAVNLAKSQ 255 Query: 260 NLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 + L + ++ ++ ++ +++ Sbjct: 256 PICHYPLPFDTEIHQYWLMWHPKYDHDSAHRWVREKVTRVM 296 >UniRef50_A3YI62 Transcriptional regulator, LysR family protein n=2 Tax=Oceanospirillaceae RepID=A3YI62_9GAMM Length = 305 Score = 274 bits (701), Expect = 4e-72, Method: Composition-based stats. Identities = 59/302 (19%), Positives = 125/302 (41%), Gaps = 7/302 (2%) Query: 4 LYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKG 63 + L++FDLNLL+IFE + +S+AAE ++++ SA+S +L RLR Q +DPL +++ G Sbjct: 1 MSVLRQFDLNLLIIFEALISECHVSRAAEKVFLSQSAMSHALNRLRTQLDDPLLVKTENG 60 Query: 64 IAPTTTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCL 120 + PT L + + + L +E+TI+ S + F I L Sbjct: 61 LTPTPRALAMLPDVRQALNLVERTISPAESFQASLSDRTFRIASTDYFETVVFPEWFSQL 120 Query: 121 RQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPV--ISRSVICMPLHTIRNTLICS 178 + + + L+S E+A L + DL++ + +I T + + S Sbjct: 121 QLSAP-NVRVEIDLISEESALLRLEKGEIDLIVGMDKEQKLPSHLIVQDWLTEKQVCLAS 179 Query: 179 NRHPRITDNSTYEQIMAEEFTQ-LISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINS 237 ++ + + E +A + + ++ + + + R ++ + Sbjct: 180 IQNQNARGSLSLEAYLALPHIRFFDLEGKTDSNVDRWLASQTLARNHIASTTNYMAAARI 239 Query: 238 IAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLN 297 +A T+ + +PY + + + + + LP+I + + + + L Sbjct: 240 VANTEAIITLPYHMAKLFTQMMPVSIVTPPDGLPAIDMTLVQHPLYAKDSGIIWLKQVLC 299 Query: 298 ES 299 E Sbjct: 300 EH 301 >UniRef50_Q0BCW3 Transcriptional regulator, LysR family n=30 Tax=Proteobacteria RepID=Q0BCW3_BURCM Length = 342 Score = 273 bits (700), Expect = 4e-72, Method: Composition-based stats. Identities = 50/289 (17%), Positives = 110/289 (38%), Gaps = 7/289 (2%) Query: 17 IFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTTGLNLHHH 76 F+ +Y+H S++ AA L ++PSA+S +L RLR D LF+R G + PT ++ Sbjct: 50 AFDALYRHRSVAAAAHELAMSPSALSHALARLRDAIGDALFVRLGNEMQPTVRADDIATW 109 Query: 77 LEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSVEIECHDI 133 L + + + + ++ + F+ + + L+ + + + + + Sbjct: 110 AGDALDTMSKGLARARRFDPAQSDRTFVFAASDYTAFAVLPALLARIERVAP-RLRIRVV 168 Query: 134 LMSAENAEELLVHRKADLVITQMPV---ISRSVICMPLHTIRNTLICSNRHPRITDNSTY 190 + + + L + D + S + + +I S HP I T Sbjct: 169 HSERKISIDELAAGRIDFALGYHEESTADSPGIEDFDWFSDDYVVIASAAHPDIRRRLTL 228 Query: 191 EQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLGIVPYE 250 +Q +A + + + +D + R+++ R S+L +IA + LL VP Sbjct: 229 DQYLAARHVVVTPWNESRGVVDYVLDRLGLARQVAVRLPSVLAAPFAIAESTLLMTVPNR 288 Query: 251 LYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNES 299 + R ++ +P + + + +L ++ Sbjct: 289 AAQALRHAAPIRIFPAPFEIPRYTVKVYSHAKHARTDAHRWIRAQLLDA 337 >UniRef50_Q88LJ0 Transcriptional regulator, LysR family n=1 Tax=Pseudomonas putida KT2440 RepID=Q88LJ0_PSEPK Length = 320 Score = 273 bits (700), Expect = 4e-72, Method: Composition-based stats. Identities = 55/283 (19%), Positives = 116/283 (40%), Gaps = 6/283 (2%) Query: 22 YQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTTGLNLHHHLEKNL 81 Y+ ++S AA L ++ S SL+RLR F D LF+ +G+G+ PT +++ + L Sbjct: 18 YREQNLSAAARRLGMSQPMASASLRRLREYFEDQLFLSTGRGMRPTPFTVSIAASVSGVL 77 Query: 82 RGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSVEIECHDILMSAE 138 ++ I + + F I + + ++R L +D+ + + + + Sbjct: 78 ERIKHEILAKPAFQPRQSDRLFTISTSDIGALIFVPPILRRLGEDAPNT-DLRCVSLPHQ 136 Query: 139 NAEELLVHRKADLVITQMPVIS-RSVICMPLHTIRNTLICSNRHPRITDNSTYEQIMAEE 197 E+ L DL + P + V L T I HP I D + EQ +A + Sbjct: 137 QLEQALEQGSVDLAVGYFPDLQGEQVKTQALFEHNFTCIVRRNHPSIGDTLSLEQFLAAD 196 Query: 198 FTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLGIVPYELYNSYRD 257 + + + + + E + R++ +++ IA T+++ VP L + Sbjct: 197 HLVVNQEGRSQEIFEQRLRELKLQRRVHLEVPHFMSVPQLIASTNMVATVPLSLGVWFAS 256 Query: 258 FLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 +K + + +L + +++ ++ S F + + E Sbjct: 257 E-QIKMLTPPIEVEKFELKLHWHRQMEDDPAVSWFRNAVFEEL 298 >UniRef50_B0KG68 Transcriptional regulator, LysR family n=9 Tax=Pseudomonas RepID=B0KG68_PSEPG Length = 324 Score = 273 bits (700), Expect = 4e-72, Method: Composition-based stats. Identities = 62/302 (20%), Positives = 121/302 (40%), Gaps = 7/302 (2%) Query: 2 ANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSG 61 N +L+K D+NL+V+FE + Q ++++AAE L++ VS +L RLRA FNDPL +R G Sbjct: 16 MNRNELRKADINLMVVFEALMQERNLTRAAEKLFVAQPTVSAALARLRAMFNDPLLVRVG 75 Query: 62 KGIAPTTTGLNLHHHLEKNLRGLEQTIN---IVNKSELKKNFIIYGPQLISCSNNSMLIR 118 + P+ + +L L + ++ + K F I + L+R Sbjct: 76 NRMEPSARAEEVIKYLTPALDAMSVALSLTHDFDPLTSKMTFRIGLSDDVESGLLPPLLR 135 Query: 119 CLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICS 178 LR ++ + + +LL + I+Q + + L T++ + Sbjct: 136 ALRVEAP-NVVVVVQHVDYWRIPDLLAAGDVTVGISQTKGLPANAKRKVLRTMQGR-VVR 193 Query: 179 NRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSI 238 + T ++ A Q+ + + + E RK+ ++ + Sbjct: 194 AD--KSATPLTLDEFCARPHVQVSPTANTQGVVDDWLKEIGRERKVVLSVPQFSSLPAIL 251 Query: 239 AVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 A TDLL P + NL+ +L +++L + + ++ ++ RL Sbjct: 252 AGTDLLACCPDYAAQGMERWGNLQAEQLPFETTALELAMVWLSTTDSDPAERWLRSRLEH 311 Query: 299 SF 300 Sbjct: 312 YM 313 >UniRef50_A4XED3 Transcriptional regulator, LysR family n=1 Tax=Novosphingobium aromaticivorans DSM 12444 RepID=A4XED3_NOVAD Length = 333 Score = 273 bits (699), Expect = 6e-72, Method: Composition-based stats. Identities = 49/297 (16%), Positives = 107/297 (36%), Gaps = 6/297 (2%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 + DLNLLV + + S+S AA+ L ++ SA S +L RLR F D L + G+ + Sbjct: 1 MRFGRLDLNLLVALDALLTERSVSLAADRLCLSQSATSSALGRLREYFGDELLVVKGRNM 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTIN---IVNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 T L + L + T+ + + + I + + + + Sbjct: 61 ILTARAEELIEPVRAVLEQIRTTVAVAPPFDPATTDRVIRIMASDYSTEVLLTDALATME 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 + + + M + E + DL++T IS L ++ + + Sbjct: 121 RCAP-SMRFEIQPM-HDAPIEAIERGYIDLLLTIDYAISSDHPSQILFEDDYVVVGAADN 178 Query: 182 PRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEI-DERFMNRKISFRGSSLLTIINSIAV 240 P + + T + A V + + R++ S L++ + Sbjct: 179 PAMAEPMTRQLYFELGHVSARFGKARVPAFEDWFVRRQKQQRRVEVVAPSFLSLPGLVVG 238 Query: 241 TDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLN 297 T + + + + L ++ +P I+ + +N ++ N+ +++L Sbjct: 239 TRRIATMHRRMAEIVVRNMPLVIREIPFDIPPIREALQWNIANNNDRALRWVVEQLE 295 >UniRef50_UPI0000383CFA COG0583: Transcriptional regulator n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI0000383CFA Length = 329 Score = 273 bits (699), Expect = 6e-72, Method: Composition-based stats. Identities = 49/294 (16%), Positives = 97/294 (32%), Gaps = 6/294 (2%) Query: 10 FDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTT 69 D+ + + ++S+AAE L VS +L+RLR DPL +R G + PT Sbjct: 9 LDVRAMRTLLVLLTECNVSRAAERLGQAQPTVSLALKRLREMLGDPLLVRYGGSLVPTER 68 Query: 70 GLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSV 126 GL+L LE L ++ + + + + F + + L+R +R+ + Sbjct: 69 GLDLKVSLEAILSEIDARLTPHPTFDPAHSDRTFRLAANNCLGSVFLPPLVRTIRRAAPG 128 Query: 127 EIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRIT- 185 E+ + D VI P + L + + H Sbjct: 129 VTVEVGQTPPMEDLLRQMAEGAIDAVIGNWPQPPSHLRISTLLSTDIVCVMRPNHRLARR 188 Query: 186 -DNSTYEQIMAEEFTQL-ISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDL 243 +AE ++A + I + E + R+I+ + +A +DL Sbjct: 189 EGRIDLADFLAEGHLSPTSDRNAQLSPIDGRLIELGLKRRIAVTVPEYAMVPYMLAQSDL 248 Query: 244 LGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLN 297 L + L + Y+ ++ ++ + + Sbjct: 249 LFTTGRHFAEQIAQSFAFSLVDAPEELGRMSFYMLWHDCKHHSPAHAWLRRTIR 302 >UniRef50_A5VEA0 Transcriptional regulator, LysR family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5VEA0_SPHWW Length = 309 Score = 272 bits (698), Expect = 7e-72, Method: Composition-based stats. Identities = 63/306 (20%), Positives = 136/306 (44%), Gaps = 14/306 (4%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 L+ DLNLL+ + ++ ++++AAE + I+ +S +LQ+LR F+DPL R G+ + Sbjct: 1 MHLRGLDLNLLIALDALFTEKNVTRAAERINISQPGMSAALQKLRWHFSDPLLERVGRRM 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTIN---IVNKSELKKNFIIYGPQLISCSN-NSMLIRCL 120 T G L + + L + + + + ++ F I S +L R Sbjct: 61 ELTVRGRALADPVREILIKVRDLTDKPEEFDPATARRVFRIGATTFCSDILAAPLLCRIE 120 Query: 121 RQDSSVEIECHDILMSAENAEELLVHRKADLVIT-QMPVISRSV------ICMPLHTIRN 173 R ++ ++ D+ A + LV + D IT ++S V + L T Sbjct: 121 RIAPNISVQFEDL---ATDTVHRLVDGQLDFAITISARILSDEVNLDSSLSSLDLFTDAF 177 Query: 174 TLICSNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLT 233 L+ S ++ R+ D T++Q+ + + + + ++ +I + Sbjct: 178 VLVTSRQNSRVGDAVTFDQLCELPYIETRFGNVIAGISEQMWRQQPKQPQIRAWLPNFQL 237 Query: 234 IINSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFI 293 +++++ TD++ IVP L + D N++ + + +P+I+ + +++ + + S F Sbjct: 238 TLDTVSHTDMVAIVPLHLAQLHGDRYNVRTLPVPVEMPTIEERLFWHQRNDQDAGHSWFK 297 Query: 294 DRLNES 299 L E+ Sbjct: 298 GLLQET 303 >UniRef50_Q5QVJ9 Transcriptional regulator, LysR family n=1 Tax=Idiomarina loihiensis RepID=Q5QVJ9_IDILO Length = 331 Score = 272 bits (698), Expect = 8e-72, Method: Composition-based stats. Identities = 54/301 (17%), Positives = 118/301 (39%), Gaps = 8/301 (2%) Query: 3 NLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGK 62 ++ +L+ DLNLLVI + + +++AA L ++ A S +L R R F+DPL R Sbjct: 26 DMVNLRSLDLNLLVILHALLEEQHVTRAARRLALSQPATSNALDRCRHIFDDPLLERVAG 85 Query: 63 GIAPTTTGLNLHHHLEKNLRGLEQTIN--IVNKSELKKNFIIYGPQLISCSNNSMLIRCL 120 + T +L L + L + + V +++++ + + L+ L Sbjct: 86 EMRLTAKAQSLKEPLSQALLAITAIVEIPKVELTQVRQTVRLIMADQPGLIVMTHLLTKL 145 Query: 121 RQDSSVEIECHDILM-SAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSN 179 + ++ + S+++A L + +AD+ I+ P + + + Sbjct: 146 STSAP-KVNLSLLPWRSSKDALHRLENGEADIAISTFPALPPKFYRQQIAYESYVVAMRA 204 Query: 180 RHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIA 239 HP ++ +A + + ++ + ++ R + + I I Sbjct: 205 SHPAAQK-FNADEWLAWPHIVVSGEGNARGSVEEVLAQQGKVRHVGAVVPNFTMIDPLIK 263 Query: 240 VTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNES 299 TD++ P N D L + +P L+++++ ++LV I+ L Sbjct: 264 ATDMIATTP---MNCLSDPQGLAIFEPPIAVPGFSLHLAWHARRDSDLVVKHVIETLQHL 320 Query: 300 F 300 F Sbjct: 321 F 321 >UniRef50_A6CXP0 Transcriptional regulator, LysR family protein n=2 Tax=Vibrionaceae RepID=A6CXP0_9VIBR Length = 310 Score = 272 bits (697), Expect = 9e-72, Method: Composition-based stats. Identities = 73/297 (24%), Positives = 126/297 (42%), Gaps = 5/297 (1%) Query: 8 KKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPT 67 KKFDLNLL +F Y+ S++K+AE L +T SAVS +L RL+ LF R+G+GI PT Sbjct: 12 KKFDLNLLRVFISTYETESVTKSAERLDLTQSAVSNALTRLKENVGKELFSRTGRGIKPT 71 Query: 68 TTGLNLHHHLEKNLRGLE---QTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDS 124 L+ ++ +E Q + + + ++ F++Y + L Sbjct: 72 RYAKELYEQTHDHIMSIEKVIQGLEAFDPKKTQRTFVVYCHEAAMLRLQKRL-HVCTTYP 130 Query: 125 SVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRI 184 ++EI ++ E L K DLVI P S+ LH+ T + S HPRI Sbjct: 131 NIEIILKELPPKDARIYEDLQMEKVDLVIDVSPSDSKVFQSELLHSEGLTCVASKNHPRI 190 Query: 185 -TDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDL 243 M E L + + ++ + E RK+ + SSLL ++ S++ + Sbjct: 191 QQGKFDKSNYMTESHVLLNIRRHNLTFVEWLVSEVLPPRKVFSQHSSLLGMLPSVSNSQA 250 Query: 244 LGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 + ++P + Y D L+ + Y+ + +N + ++ Sbjct: 251 IAVIPLSVAEQYSDIFQLQTFPFPFETKTFDSYMVWPSKMSHNSAITWLRQQMVHHL 307 >UniRef50_D1P3H6 Transcriptional regulator, LysR family n=1 Tax=Providencia rustigianii DSM 4541 RepID=D1P3H6_9ENTR Length = 303 Score = 272 bits (697), Expect = 1e-71, Method: Composition-based stats. Identities = 53/300 (17%), Positives = 109/300 (36%), Gaps = 8/300 (2%) Query: 4 LYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKG 63 + + + DL L +F+ + + ++++AA + +T AVS L +LR F D LF+RS +G Sbjct: 1 MNGITRIDLKQLRVFKALLKERNVTRAAAQMGLTQQAVSAQLSKLRDTFQDHLFLRSAQG 60 Query: 64 IAPTTTGLNLHHHLEKNLRGLEQT--INIVNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 + PT L + + + + +E+ F+I L+ +R Sbjct: 61 LIPTPLAEQLEPRVNTVFESIAALSPPDRFDPAEVYTTFVISATDYAVAVILPRLMAKVR 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 + ++ ++ LL DL +T + L + + + + Sbjct: 121 TQAP-GLKLIIRDFESDRLYPLLTSGDLDLALTFPAFVPDGCQTKWLFSEHHICVTRSDS 179 Query: 182 PRITDNSTYEQIMAEEFTQLISKSAGV-DDIQMEIDERFMNRKISFRGSSLLTIINSIAV 240 P T I + A + + +R I S IA Sbjct: 180 PMQNQQFTISDIADLPQIIVSPTRANLIGSADDWFASKGYSRNIVMSVPSFAAAPACIAS 239 Query: 241 TDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 TD + +P + ++ I+L+ PS + +++ S + + + L + F Sbjct: 240 TDCIAFLPSRI----LPNPLVRPIQLDDSPPSFDVIAAWHLRSNQDPLHKWILSLLQQEF 295 >UniRef50_B7VQ63 Transcriptional regulators, LysR family n=3 Tax=Vibrionales RepID=B7VQ63_VIBSL Length = 304 Score = 272 bits (697), Expect = 1e-71, Method: Composition-based stats. Identities = 70/299 (23%), Positives = 134/299 (44%), Gaps = 3/299 (1%) Query: 4 LYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKG 63 + D++K DLNLL +F +Y+ SI+ A+ESL +T VS +L+RL+AQ LFIR G+G Sbjct: 1 MSDMEKLDLNLLSVFLEVYRLKSITLASESLGMTQPGVSGALKRLQAQLGTDLFIREGRG 60 Query: 64 IAPTTTGLNLHHHLEKNLRGLEQTINIVNKSELKKN--FIIYGPQLISCSNNSMLIRCLR 121 I PT + L +E L G+ ++ + + + +++ F I ++ L+ Sbjct: 61 ITPTNAAMQLALRVEPALDGITSAVSTLKQFDNQQHHVFRILVNEIGLTKLQP-LVEKDD 119 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 ++ IE + + + E+ + L ++ADL I + + LI H Sbjct: 120 TLGNISIEFNMVPSNEEDLLQSLSMQQADLAIDIHYPQVNGYMNQQVIEDELVLIAKKGH 179 Query: 182 PRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVT 241 PRI + T Q E+ + + + RK+S SL+T+ ++ + Sbjct: 180 PRIDGSVTEAQYYHEKHITFRMRRSHLYTADYFTKNPIQQRKVSSECDSLMTMCVLVSGS 239 Query: 242 DLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 D +G N + + L+ ++ + +K Y+ ++K + N ++ + Sbjct: 240 DCVGSTSRGFANQFAERFQLQVLEQPFEVLPMKQYMIWHKRTDLNTAHQWLRTKIQQHM 298 >UniRef50_A6V8B0 Transcriptional regulator, LysR family n=10 Tax=Proteobacteria RepID=A6V8B0_PSEA7 Length = 310 Score = 272 bits (696), Expect = 1e-71, Method: Composition-based stats. Identities = 62/296 (20%), Positives = 124/296 (41%), Gaps = 7/296 (2%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 L + DLNL +FE +Y+ ++++AA L+++ SAVS +L RLR Q DPLF+R G+G+AP Sbjct: 10 LSRLDLNLFRVFEVVYRERNLTRAAALLHLSQSAVSHALARLREQLGDPLFVRQGRGVAP 69 Query: 67 TTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQD 123 T L + L GL++++ + + F++ P+ + + LRQ Sbjct: 70 TPLAERLAPGIRDALAGLQRSVARCQSFDPRHDARTFLLNMPEQLEPLVLPDFLGHLRQV 129 Query: 124 SSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPR 183 + ++E + + L + D + ++ PL R ++ P Sbjct: 130 AP-QVEVRCSSLHWAELKTELEAGRIDAAVEVARPTDAALRRQPLLEDRLWVMAG---PE 185 Query: 184 ITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDL 243 + E+ +A + S+ G+ + + + + RK+ R L+ +A Sbjct: 186 FAGELSAERYLAAAHVAVTSRRRGICIEDLALGQLGLTRKVRQRCQHYLSAALLVAQGGY 245 Query: 244 LGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNES 299 L + L + + + LP++ L + +++ + L E Sbjct: 246 LLTLTRRYAELLNRGLGNRLLPMPLALPAVALNLYWSRQADAEPGGRWLRGELMEL 301 >UniRef50_C7RD08 Transcriptional regulator, LysR family n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RD08_KANKD Length = 319 Score = 272 bits (696), Expect = 1e-71, Method: Composition-based stats. Identities = 63/305 (20%), Positives = 125/305 (40%), Gaps = 9/305 (2%) Query: 2 ANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSG 61 + +++ D+NLLV+ + + + IS AA+ L+++ AVS+SLQRLR NDPL IR G Sbjct: 3 MQVENIRSLDMNLLVLLDVLLEEKHISNAADRLHMSQPAVSRSLQRLRDMLNDPLLIRVG 62 Query: 62 KGIAPTTTGLNLHHHLEKNLRGLEQTINI--VNKSELKKNFIIYGPQLISCSNNSMLIRC 119 G T L L L+ L + ++ K I L L + Sbjct: 63 NGYQLTDKALELQPKLKSWLADFMCMMQPEKFEPAKAKGEISIMSMDLEMSLFMPNLWQD 122 Query: 120 LR-QDSSVEIECHDILMSAENAEELLVHRKADLVITQMP--VISRSVICMPLHTIRNTLI 176 L+ Q +V + +I + LL D ++++ + S L L+ Sbjct: 123 LQVQAPNVALRSFNI---RPDGISLLEQGDIDFLVSEEDKSLESTKYHHYHLIQHEFVLV 179 Query: 177 CSNRHPRI-TDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTII 235 S +H ++ + + + G I ++++ ++R I+ + + Sbjct: 180 MSKQHRLAKQKAIGMDEYLKQRHGLVTVTGKGKPFIDRTLEKQGLSRNIALYVPTFHLAL 239 Query: 236 NSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDR 295 + + TDL+ +P + + + ++ LP + +Y+ +++ + F Sbjct: 240 DICSRTDLMFSMPRLVAEKEGERYGVVMKEMPLKLPLLDIYLYWHERQHQTALHKWFRTL 299 Query: 296 LNESF 300 + ESF Sbjct: 300 MRESF 304 >UniRef50_A1WMY5 Transcriptional regulator, LysR family n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WMY5_VEREI Length = 304 Score = 272 bits (696), Expect = 1e-71, Method: Composition-based stats. Identities = 53/299 (17%), Positives = 118/299 (39%), Gaps = 8/299 (2%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 L++ DLNLLV F+ + + ++S+AAE L ++ SAVS +L+RLR F D L +R +G+ Sbjct: 1 MGLRQIDLNLLVTFQALVEERNVSRAAERLALSQSAVSHALKRLRNTFQDELLVRGPRGM 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 PT + L ++ L +E ++ + + + + + + + + +R Sbjct: 61 EPTPRAVTLAIAVKSGLATIETAVDEKRSFDPATCHSTYYLSVTEYVRPFIMAHMCAYVR 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 + + + + + + + +PV + M L + H Sbjct: 121 EAAP-HVRLVFESPDEHQVGSAVAYEGLQIRLADLPVNGP-MESMRLFDDTFAVAMRREH 178 Query: 182 PRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVT 241 P T E+ + ++ G I + R + R + + + L + + T Sbjct: 179 PFAEQELTLEKYLQLAHIKVT--GVGSSAIDRALTARSLVRDVVVKMPNWLEALEVVECT 236 Query: 242 DLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 DL+ +P R L L + + +++ + ++ + + ++F Sbjct: 237 DLVVAMPNHWTRLGRLPRCCITRPLPLAL-QMPIDAAWHPRNSSDPAHVWLRETVRQAF 294 >UniRef50_B2JFW9 Transcriptional regulator, LysR family n=39 Tax=Burkholderia RepID=B2JFW9_BURP8 Length = 342 Score = 271 bits (695), Expect = 1e-71, Method: Composition-based stats. Identities = 54/295 (18%), Positives = 101/295 (34%), Gaps = 4/295 (1%) Query: 9 KFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTT 68 D+ L+ + + S+++ A L T A+S +L++LR NDP+ +R G+ PT Sbjct: 8 SLDIWLVRVLRTLLVERSVTQTALRLNQTQPAISTALRKLRETLNDPILVRGKSGMVPTE 67 Query: 69 TGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSS 125 G +L +K LR ++ + + ++ F I P ++ +I R+ + Sbjct: 68 YGESLLAAAQKVLRDVDFVATPHGDFDPARSRRTFRIAAPDYLNDFFMPTVIAQFRETAP 127 Query: 126 VEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRIT 185 + L + L + DLVI P L + + HP Sbjct: 128 HARLEIESLGPLFDHTCALDAGELDLVIGNWPKPDLRFERSDLFSDTVVCMMRADHPLAK 187 Query: 186 DNSTYEQIMAEEFTQLI-SKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLL 244 T + +A A I +R+I + + +DL+ Sbjct: 188 APLTRDAYLAAPHLAPAHYSGARGGAIDTGFARARASRRIVATLPYFGLVPQVLLQSDLI 247 Query: 245 GIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNES 299 Y L L + + P P IK Y ++ + + + Sbjct: 248 FTTTRRFALHYAAMLPLAVVDVPIPFPRIKCYQMWHPQPDRPSDIAWLRGLMAQV 302 >UniRef50_Q7MEK1 Transcriptional regulator n=15 Tax=Vibrionaceae RepID=Q7MEK1_VIBVY Length = 307 Score = 271 bits (695), Expect = 2e-71, Method: Composition-based stats. Identities = 75/302 (24%), Positives = 139/302 (46%), Gaps = 4/302 (1%) Query: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 M + + +K DLNL+ IF I++ ++SKAA L I+ AVS++L RLR +++PLF RS Sbjct: 1 MCSRFAMKNTDLNLIPIFVAIFEEQNLSKAAARLDISQPAVSKALARLRDIYDEPLFHRS 60 Query: 61 GKGIAPTTTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLI 117 G+ PT+ ++++ + + T++ + F I + S L+ Sbjct: 61 PSGVEPTSFAVDIYPAMLTAFKNFTSTLSASSEFEAKVSNRIFSIACVSVASYELMPQLL 120 Query: 118 RCLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLIC 177 + +RQ + I + E+ E L ++ DL+I P ++ P+ + R ++C Sbjct: 121 KQIRQHAP-NISLEVHPLFTEDYESDLRLQRYDLIIDMAPRGWTTLKVEPIFSERLMVVC 179 Query: 178 SNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINS 237 HPRI D + Q +AEE + A + E RKI++R S L ++ Sbjct: 180 CADHPRIADACSVAQFLAEEHVVVSRWHARKSLMSAEDIADLAKRKIAYRASGALEMLPV 239 Query: 238 IAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLN 297 I ++ +G++P N++ N+K + L L ++ S + ++L Sbjct: 240 IHGSEYIGMLPESTINAFAGTYNIKAVSLPFDHDVYDLCAIWHPSRSSESAHQWLRNQLK 299 Query: 298 ES 299 + Sbjct: 300 AA 301 >UniRef50_A1U796 Transcriptional regulator, LysR family n=3 Tax=Marinobacter RepID=A1U796_MARAV Length = 303 Score = 271 bits (694), Expect = 2e-71, Method: Composition-based stats. Identities = 60/297 (20%), Positives = 112/297 (37%), Gaps = 8/297 (2%) Query: 2 ANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSG 61 D+ DL L F + S+S+AA L +T SAVS +L+RLR F DPLF++SG Sbjct: 1 MKPVDMLSLDLRSLATFVAVLDEGSVSRAAVRLGVTQSAVSHTLERLRQAFGDPLFVKSG 60 Query: 62 KGIAPTTTGLNLHHHLEKNLRGLEQTIN--IVNKSELKKNFIIYGPQLISCSNNSMLIRC 119 +GI PT L H+ + L L + + + F I L+R Sbjct: 61 RGIVPTDYALRTGPHIRQLLDDLRTLPSGPPFEPASAEFTFTIAANDYQRDLLLPGLLRI 120 Query: 120 LRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSN 179 LRQ + I I NA ++L DL+I+ + ++ L R + Sbjct: 121 LRQQAP-GIRLQVIPSGIPNA-DMLRKEACDLIISPHAPETTDIMQRGLMADRMVVFYDP 178 Query: 180 RHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIA 239 + + + + L+ + + + + ++R+ ++ + + Sbjct: 179 NQ--RNAPTDLAEYLKADHIALMFATGERPGFENTLHAKGLDRRNVVTVANFSGLPEFLR 236 Query: 240 VTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRL 296 TD+L P + + L L + +++ N+ +++ Sbjct: 237 GTDMLATAPERMSAQLMRDF--AWVPLPFDYKPFTLLMLWHRRHQNDPAHRWVRNQV 291 >UniRef50_B2JTT0 Transcriptional regulator, LysR family n=3 Tax=Burkholderiaceae RepID=B2JTT0_BURP8 Length = 324 Score = 271 bits (694), Expect = 2e-71, Method: Composition-based stats. Identities = 51/318 (16%), Positives = 122/318 (38%), Gaps = 24/318 (7%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 + DLNLL +F+ I++ ++ A + L+++ SA+S +L R+R D LF+R+GKG+ Sbjct: 1 MSADRIDLNLLRVFDAIFEDRNLGLAGKRLHLSQSAISHALARMREVLGDDLFVRTGKGM 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTI--NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQ 122 PT L + + L+ + + + + ++ F++ I+ L + L Sbjct: 61 EPTMRALRMAAQVRGALQQIRAALGVDEFDPRVAQRKFVVAANDYITSLLLGRLSQRLHA 120 Query: 123 DSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHP 182 ++ + ++ + + + + D+ I + + L + ++ HP Sbjct: 121 EAPL-VDLVVRPSTRLDLAGQIDVGRIDMAIGIFADVPTRLRGTTLWEQTDVVLLHRDHP 179 Query: 183 RITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNR-------------------- 222 T + ++A + + I ER + R Sbjct: 180 IAGRAVTRDDMLAHPLIAISQGGEEEGAVGGFIVERGLARQSEMFNRDALNRAFDDPAET 239 Query: 223 -KISFRGSSLLTIINSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNK 281 ++ + L + + +D+L +VP L + + LK + P + + +++ Sbjct: 240 PRMRMSVAHSLALPALLRHSDMLALVPSSLGRELQRYGELKMCATPYACPDVAVRAVWHE 299 Query: 282 SSLNNLVFSRFIDRLNES 299 + + +L + Sbjct: 300 RNDADPALQWLRQQLADV 317 >UniRef50_A7HRT9 Transcriptional regulator, LysR family n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HRT9_PARL1 Length = 315 Score = 271 bits (694), Expect = 2e-71, Method: Composition-based stats. Identities = 72/300 (24%), Positives = 122/300 (40%), Gaps = 5/300 (1%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 ++++ DLNLL++F IY SISKAA L IT AVS +L+RLR D LF +SG G+ Sbjct: 1 MNIRELDLNLLLVFNAIYTERSISKAAVKLGITQPAVSNALRRLRNFTGDTLFYKSGSGV 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 APT L + L +E+ + + + ++ F I +I + L+ R Sbjct: 61 APTRAAATLAIPIGHALDTVERGLSSVRSFDPATSRRTFRIGVNDIIHDALVPALVGYTR 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 +++ + + + A E+L + D+ + I S++ + +I + H Sbjct: 121 REAP-NLILEFVQQVGDRALEMLKGGEIDMALLPNFAIDDSLVSTKVWDDSFAIIVARNH 179 Query: 182 PRITD-NSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAV 240 P T + I F I M R + + I +AV Sbjct: 180 PIAKSNRLTVDDIRELRFVVTTHVQRLRTFIDSAFRANGMERVTACAVADTHNIYPLVAV 239 Query: 241 TDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 +DL V + Y +L L LP I+ I++ K + + +R+ E Sbjct: 240 SDLAACVGRFHADRYNTDGSLVMFDLPFELPKIQGRIAWAKEADEDEGHRWVRERVLEIL 299 >UniRef50_A1K8D7 Transcriptional regulator, LysR family n=1 Tax=Azoarcus sp. BH72 RepID=A1K8D7_AZOSB Length = 298 Score = 271 bits (693), Expect = 3e-71, Method: Composition-based stats. Identities = 57/299 (19%), Positives = 119/299 (39%), Gaps = 9/299 (3%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 +++ DLNLL IFE +Y ++S+AA L +T +VS L RLR F DPLF+R+ G+ Sbjct: 1 MNIQSVDLNLLKIFEAVYLERNVSRAAVRLELTQPSVSHGLTRLRLLFGDPLFVRTRSGV 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 PT + +++ LR L+ T++ + + F ++ L+R L Sbjct: 61 EPTVVADRIAGPVQQALRVLQTTLDEHAHFEPASSGRTFRLHMSDFGEVIFLPKLMRALL 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 + + + + L + DL I +PV+ + C L +I RH Sbjct: 121 ERAP-GVRIETRQLGGVELAAALDSGQIDLAIGYLPVLDQGFECRHLLADEYAVIA-PRH 178 Query: 182 PRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVT 241 + +F + S + + E + ++ + + +A Sbjct: 179 LIPSGGKGDNAFNGLDFIAVTSHPQTL----AILRECGLLDRVKLWVPHFMVVPAILAER 234 Query: 242 DLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 + + P E+ +++ ++ L + + + +N+ + + + + + F Sbjct: 235 NFAAVAPREVVHAFSPRSRVRSFPLPALQRGMDVNLYWNRRYTGDPGHAWMRELVADLF 293 >UniRef50_B9Z947 Transcriptional regulator, LysR family n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z947_9NEIS Length = 330 Score = 270 bits (691), Expect = 5e-71, Method: Composition-based stats. Identities = 64/298 (21%), Positives = 120/298 (40%), Gaps = 6/298 (2%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 L++ DLNLLV F+ + Q +S+AA L++ A+S +L RLR +DPLF+RSG + P Sbjct: 11 LRRLDLNLLVAFDALMQERHVSRAAARLFLGQPAMSHALARLRQLLDDPLFVRSGSRMEP 70 Query: 67 TTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQD 123 T L + L +Q + + + + F + P + LI LR+D Sbjct: 71 TPRACELAPQVRAWLEQAQQFLFRADAFDPAAAHATFRLAAPDGMEALLYPALIATLRRD 130 Query: 124 SSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICM-PLHTIRNTLICSNRHP 182 + + L+ + L H + DL+IT P+ R L + S R Sbjct: 131 AP-GVRLRSQLLETDQQLAALDHDEVDLLITAAPLALRDWHSRLRLFKSDFISVHSRRQL 189 Query: 183 RITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTD 242 + + +T + + + + + + R++ +SLL I + +A Sbjct: 190 PLPEPATLADLASCDHVVSSYRGTAAGVVDHLFAAHGLERRVQVLSASLLAIGHIVAQAP 249 Query: 243 LLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 L+ I P + L L I + + +++ + + + D + + Sbjct: 250 LMSIQPAIYRGLFSTTPELACAPLPGEA-RITVGLVWHRRNDRHPLHRYLRDTVIAAM 306 >UniRef50_D2B6V0 LysR family transcriptional regulator n=5 Tax=Actinomycetales RepID=D2B6V0_STRRD Length = 313 Score = 270 bits (691), Expect = 5e-71, Method: Composition-based stats. Identities = 56/294 (19%), Positives = 117/294 (39%), Gaps = 5/294 (1%) Query: 10 FDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTT 69 DLNLLV + + + S++ AA L + A+S++L R+R Q NDP+ +R+G+ + PT Sbjct: 2 LDLNLLVALDALLEEGSVAGAAARLNTSAPAMSRTLGRIRRQLNDPVLVRAGRHLVPTPR 61 Query: 70 GLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSV 126 L LH + +R + + L + F + ++ + + L+ + Q + Sbjct: 62 ALELHAAVRDLVRQASALLVPAGDPAPATLARTFNLQASDMLLSALAAPLVLAVGQRAP- 120 Query: 127 EIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRITD 186 + + L + DL I + + PL T R + HP + Sbjct: 121 GVVLRFLP-DTLEGTSALREGRVDLEIGVIDHAAPETCVEPLGTGRIVGMAREDHPLVIK 179 Query: 187 NSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLGI 246 T + + + I + R + R+ + SS + +DL+ + Sbjct: 180 GVTLRRFADAKHVGVSRHGRLHGPIDDLLAARGLRRRTAVTVSSHSMALLLARQSDLVCL 239 Query: 247 VPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 P + L L+ ++ LP +++ ++++ + + D++ E Sbjct: 240 APAPADDDLPAALGLRAFEIPLELPEVEVAMAWHPRNDADGGQRWLRDQVREVL 293 >UniRef50_B0TPA4 Transcriptional regulator, LysR family n=2 Tax=Shewanella RepID=B0TPA4_SHEHH Length = 301 Score = 269 bits (690), Expect = 6e-71, Method: Composition-based stats. Identities = 70/292 (23%), Positives = 131/292 (44%), Gaps = 4/292 (1%) Query: 8 KKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPT 67 K+FD+NLL +F + + S + AAE L +T +VS ++ R +A + LF+R+G+ I PT Sbjct: 5 KQFDVNLLRVFLAVCRTGSYTLAAEELDLTQPSVSNAINRFKAVVGEELFVRAGRNIKPT 64 Query: 68 TTGLNLHHHLEKNLRGLEQT---INIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDS 124 L L + +EQT + + + ++ F++ +I+ L L +D Sbjct: 65 AMANYLFEQLNDSFCNIEQTINGLEGFDPNTSERQFVVLANDVIAHMLQRRL-DELVKDL 123 Query: 125 SVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRI 184 +EI + ELL +ADLVI L + S HPRI Sbjct: 124 PIEIIFREPPDFDSEILELLTLEQADLVIDIGLPEDNRFERKLLIQEAAVCVASKEHPRI 183 Query: 185 TDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLL 244 ++ ++EQ AE + + + + +E NRK+ SS+L++ ++++ +D + Sbjct: 184 QESISWEQFFAERHVFVKLRRFNRTAVDILSEEVLPNRKVYSSKSSMLSLFSAVSTSDAI 243 Query: 245 GIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRL 296 G+ P N + NL+ + L + + + + K N +++ Sbjct: 244 GVAPRNYSNDFEKVFNLQLLPLPFNTKPLDIELVWKKKHNRNPAHIWLREQI 295 >UniRef50_A8H6N4 Transcriptional regulator, LysR family n=3 Tax=Shewanella RepID=A8H6N4_SHEPA Length = 305 Score = 269 bits (690), Expect = 6e-71, Method: Composition-based stats. Identities = 70/295 (23%), Positives = 128/295 (43%), Gaps = 4/295 (1%) Query: 8 KKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPT 67 K FDLNL IF +Y+ S S+AAE L +T S+VS ++ RL+ + LFIR G+G+ PT Sbjct: 5 KSFDLNLFRIFTAVYRTSSFSRAAEELDLTQSSVSNAITRLKLAVGEELFIRVGRGVKPT 64 Query: 68 TTGLNLHHHLEKNLRGLEQT---INIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDS 124 + +NL+ L + +EQ + + ++ F +Y + + ++ ++ Sbjct: 65 ASAMNLYQQLASPVSEIEQVASSFELFDAKRSERTFYVYASES-AILLLQGIVEQFLEEL 123 Query: 125 SVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRI 184 S+ + + + E + L K DL + S S + + + HPRI Sbjct: 124 SINLVFREPPLIEEELQMDLQLEKVDLALDIWLPESSSFKSQKVMQDKLVCVARKGHPRI 183 Query: 185 TDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLL 244 + T EQ E+ + + + + RK+ SS+L+++ + +D L Sbjct: 184 SGAITQEQYFNEKHIIFKMRRDNLSVADLLTKQVLPARKMHSEQSSILSMMALASKSDAL 243 Query: 245 GIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNES 299 IV + Y L+ +L I+ Y+ ++ N D LN++ Sbjct: 244 AIVSKSYTDEYAQLFGLQVFELPFAAEPIEYYMVWSHKLQQNRANIWLRDLLNQA 298 >UniRef50_A8H3B3 Transcriptional regulator, LysR family n=7 Tax=Gammaproteobacteria RepID=A8H3B3_SHEPA Length = 304 Score = 269 bits (690), Expect = 6e-71, Method: Composition-based stats. Identities = 79/302 (26%), Positives = 134/302 (44%), Gaps = 6/302 (1%) Query: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 M N D K+FD NLLVIF +YQ SI+ AA+SL +T VS +L+RL+A LF+R Sbjct: 1 MGNNMD-KRFDFNLLVIFLEVYQLRSITLAADSLGLTQPGVSAALKRLQATLGVELFVRE 59 Query: 61 GKGIAPTTTGLNLHHHLEKNLRGLEQTIN---IVNKSELKKNFIIYGPQLISCSNNSMLI 117 G+GI+PT + L + + ++ +K ++F++Y + L Sbjct: 60 GRGISPTNAAIQLASQVSPAYNTVNSALSNVAGFDKQTP-RSFLVYV-DEPMMNLLQPLA 117 Query: 118 RCLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLIC 177 + EI + E + L +KADL I + S S + T+IC Sbjct: 118 EQDSDMGNCEIMFQLPPIEEERLLQQLSLQKADLAIDVGQLPSLSYSNQLFYRESVTMIC 177 Query: 178 SNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINS 237 HPRI Q E+ L + A + + +E RK+S SLL+++ Sbjct: 178 RKGHPRINGKIGKIQFYQEKHITLQIRRATLTALDFFTEEVIGERKVSCECHSLLSMMAL 237 Query: 238 IAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLN 297 ++ +D + I + + Y D L+ I+ + + ++K + N + ++LN Sbjct: 238 VSESDCIAITSRSIADKYADKFGLQSIEPPFNTKPVLHNMMWHKRNEFNPAHTWLREKLN 297 Query: 298 ES 299 + Sbjct: 298 QL 299 >UniRef50_A4SSQ1 Transcriptional regulator, LysR family n=2 Tax=Aeromonas RepID=A4SSQ1_AERS4 Length = 322 Score = 269 bits (689), Expect = 8e-71, Method: Composition-based stats. Identities = 61/309 (19%), Positives = 119/309 (38%), Gaps = 17/309 (5%) Query: 2 ANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSG 61 L L + DLNLL+I + + + + S+AA L+++ SAVS++L RLR F+DPLF+RS Sbjct: 1 MLLEQLGRIDLNLLIILQVLLEERNGSRAARRLHLSQSAVSKALGRLRETFDDPLFVRSA 60 Query: 62 KGIAPTTTGLNLHHHLEKNLRGLEQTINI--VNKSELKKNFIIYGPQLISCSNNSM-LIR 118 G+ PT L L L+ L L+ I + + ++ F+I + L Sbjct: 61 YGLEPTARALVLQQQLQPILLSLDNLIQPPDFDPASTEREFVIASMDSAFTLFAPLYLSE 120 Query: 119 CLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQ----------MPVISRSVICMPL 168 RQ + + + EN+ + + D+ T + + ++ L Sbjct: 121 LKRQAPGIRLRYEE---WTENSLTEMSQGQVDIAFTVRENCISSDFRLDTLPNAICQRLL 177 Query: 169 HTIRNTLICSNRHPRITDN-STYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFR 227 T + + HP + + + +A Q + + ++ + R+I Sbjct: 178 AIDDLTCLVQHDHPALHEPEWDLARYLAYPHVQTYCEGRDRWMLDHKLAGMDLYRRIEAT 237 Query: 228 GSSLLTIINSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNL 287 S + +D++ + L + L L SI + +++ + Sbjct: 238 VPSFEAALRMGMHSDMIVTLSRLYARHATQVYPLVPLPLPIALDSISHLLIWHQRHEEDP 297 Query: 288 VFSRFIDRL 296 + L Sbjct: 298 GHRWLRETL 306 >UniRef50_A8TNA4 Transcriptional regulator MexT n=1 Tax=alpha proteobacterium BAL199 RepID=A8TNA4_9PROT Length = 299 Score = 269 bits (689), Expect = 9e-71, Method: Composition-based stats. Identities = 50/294 (17%), Positives = 114/294 (38%), Gaps = 7/294 (2%) Query: 9 KFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTT 68 DLNLL +F + + S+++AA L + AVS +L RLR++ D LF+RSG+ + PT Sbjct: 2 NLDLNLLRVFALVMRERSLTRAARRLSVGQPAVSHALARLRSELGDALFVRSGRRMEPTE 61 Query: 69 TGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSS 125 + + + L ++ ++ + + F I + + + + Sbjct: 62 WAKSFYAEIAPALERIDASLMSSRAFDPGSTDRTFRIGMSDDLQMAFLPQFLAAFTERMP 121 Query: 126 VEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRIT 185 + A E+L R LV+ + + + + + +I +R+ Sbjct: 122 -NARLVVQQTNYTTAAEMLDRRDVSLVVGYLDTLPAAAKTRTISRVSYRMIMDSRN---A 177 Query: 186 DNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLG 245 + +T A + + + + + +R + R I S+ + ++ T L Sbjct: 178 EVTTLADYCAGKHALVTFAGDLIGYVDETLQQRGVARDIRLSLSNFAVVPYALRGTGYLV 237 Query: 246 IVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNES 299 +P L + L +L P + ++++ + ++ D + ++ Sbjct: 238 TIPQYLAAVLANETGLVMAQLPFESPEFDVSMAWSPTVDSDPGERIIRDLIVDT 291 >UniRef50_Q1GFT2 Transcriptional regulator, LysR family n=1 Tax=Ruegeria sp. TM1040 RepID=Q1GFT2_SILST Length = 299 Score = 269 bits (688), Expect = 1e-70, Method: Composition-based stats. Identities = 47/290 (16%), Positives = 94/290 (32%), Gaps = 4/290 (1%) Query: 10 FDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTT 69 D++LL +F + + +++ AA L + S VS +L RLR D LF+R+ G+ PT Sbjct: 3 VDISLLRVFHAVMEERNVTAAARRLGQSQSTVSAALARLRDALGDELFLRARYGVEPTEK 62 Query: 70 GLNLHHHLEKNLRGLEQTIN---IVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSV 126 L + + L LEQ + + F + L Q + Sbjct: 63 ALQIAPDIAAGLDRLEQAFRAAEPFDPIRSTRRFRLLLGPYAEVVLAPDLAEAFAQHAPK 122 Query: 127 EIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRITD 186 + + + L + DL I + ++ L + I + Sbjct: 123 A-QLELAPIGPDLDPRKLAAQSFDLAIGRFAPPPDDLVVSDLFSDGFRCIVAPAALPEGA 181 Query: 187 NSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLGI 246 + + + + + R + S LT ++A + + Sbjct: 182 SLDLDLYETLPHVIVAPPGRWRTGVHKLTAASGLQRNTAVAVSHFLTAAPTVARINGIAT 241 Query: 247 VPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRL 296 VP + L+ + + L + I+++ + D L Sbjct: 242 VPARIAAMVAAPYGLRNVAVPRDLGTFPTQIAWHPHQRRDPRHVWLRDLL 291 >UniRef50_A9BZQ9 Transcriptional regulator, LysR family n=1 Tax=Delftia acidovorans SPH-1 RepID=A9BZQ9_DELAS Length = 323 Score = 269 bits (688), Expect = 1e-70, Method: Composition-based stats. Identities = 49/301 (16%), Positives = 115/301 (38%), Gaps = 10/301 (3%) Query: 8 KKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPT 67 +DLNLL+ + + S+++AA ++++ A+S +L R+R F DP+ +R+G+ + PT Sbjct: 3 NTYDLNLLIALDALLSTGSVTQAAGRMHLSTPAMSHTLARIREAFGDPILVRAGRSLVPT 62 Query: 68 TTGLNLHHHLEKNLRGLEQTINIVNK---SELKKNFIIYGPQLISCSNNSMLIRCLRQDS 124 L L + L + V+ + L++ F++ P+ I+ + L R L + Sbjct: 63 PRALALAEPVRALLAQARALQDPVDAGGLAGLRRRFVVRAPEGIAVVFGASLSRALEAEM 122 Query: 125 SVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRI 184 + + + + L + DL + + + + + HP + Sbjct: 123 PLA-SLQFLPETHADPG-ALREGRIDLDVGSFRSMDPETESLVISEQTLVGVVRAGHPLL 180 Query: 185 T-----DNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIA 239 + Q A + + + ++ + R+++ S + + + + Sbjct: 181 KSARKSQRPSAAQFAAARHVGITQRPGESSPVDAALEALGLQRQLALLVPSSFSALIAAS 240 Query: 240 VTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNES 299 TDL+ VP + L L L + + ++++ + D + Sbjct: 241 RTDLVACVPTRTAHGMAASLGLVVFALPIEVQVQPMRMAWHPRHQADPAHQWLRDCIQRQ 300 Query: 300 F 300 Sbjct: 301 L 301 >UniRef50_B1K4K0 Transcriptional regulator, LysR family n=3 Tax=Burkholderia cenocepacia RepID=B1K4K0_BURCC Length = 301 Score = 269 bits (688), Expect = 1e-70, Method: Composition-based stats. Identities = 53/293 (18%), Positives = 115/293 (39%), Gaps = 8/293 (2%) Query: 11 DLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTTG 70 DLNLL F + S+ KAA+ L+++ SA+S++L R+R F DP+ IR+G+ + PT Sbjct: 10 DLNLLKAFSVLVAERSVVKAAKRLHLSESAMSRTLSRVRDAFGDPILIRAGRSLIPTPRA 69 Query: 71 LNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSVE 127 L+LH + L + + +V+ + L + F I + + + L+ + + Sbjct: 70 LSLHPRVLDMLAMAQDILTRAELVDPASLTQTFTIRCNEGFATEFGAKLLDIVTTAAP-G 128 Query: 128 IECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRIT-D 186 + + ++A L KAD+ + + + L R + + HP D Sbjct: 129 VHLRFAMQDEKDA-TALREDKADIEVGVLGKSGPEIRVQTLLRDRFVGVVAMSHPLAGHD 187 Query: 187 NSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLGI 246 + + + + I + R+++ SS + ++ Sbjct: 188 PVSIDAYTRYPHVSVSRRGRRDGPIDALLSALGAKRRVATTVSSFPVALALAQGGSIVAN 247 Query: 247 VPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNES 299 VP+ + + + +L + + + ++ + D L ++ Sbjct: 248 VPFR--QTASGRIGMHTFELPVQTEPVVVSMMWHPKVDPDPAHRWLRDCLLQT 298 >UniRef50_A8IJ97 Putative transcriptional regulator n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8IJ97_AZOC5 Length = 324 Score = 269 bits (688), Expect = 1e-70, Method: Composition-based stats. Identities = 60/299 (20%), Positives = 113/299 (37%), Gaps = 8/299 (2%) Query: 3 NLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGK 62 +L +++FD LL++F + + AA L +T S VS +L+RLR DPLF R Sbjct: 4 DLNHIRRFDGALLLVFRELMATGQTTAAARRLGLTQSTVSHALRRLRDLTGDPLFQRRPD 63 Query: 63 GIAPTTTGLNLHHHLEKNLRGLEQTI----NIVNKSELKKNFIIYGPQLISCSNNSMLIR 118 G+ PT L + + LR L Q + + + ++F I GP ++S L Sbjct: 64 GLTPTPRAHELLPIVVEMLR-LSQALKGEPGEFDPAASTRHFRIAGPDIVSTVLAGPLAH 122 Query: 119 CLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICS 178 Q + + A E L + D+ I P + R L I Sbjct: 123 RFAQHAP-NARLSFGFIVGAAALEALRRGEIDMAIGHFPSVPRGFAASTLWEEEFVAIAR 181 Query: 179 NRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSI 238 HPR +A + + + + + R++ L++ +++ Sbjct: 182 KGHPRF-PPLDLAGYLAADHVLVSFSGRFTGVVDRVLQPLGLARRVVASFPLFLSVFDAV 240 Query: 239 AVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLN 297 A +D + VPY L + + L + + +P + ++ + + + + Sbjct: 241 AQSDAVAAVPYSLCERHAETFGLARLPMPIAVPGFPIVSV-RRAGVPDGGYEWLEALIR 298 >UniRef50_UPI0001B54141 LysR family transcriptional regulator n=1 Tax=Streptomyces sp. C RepID=UPI0001B54141 Length = 298 Score = 269 bits (688), Expect = 1e-70, Method: Composition-based stats. Identities = 54/293 (18%), Positives = 117/293 (39%), Gaps = 5/293 (1%) Query: 10 FDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTT 69 DLNLL + + + Q S+++AAE L +P+AVS++L RLR DPL +R+G+G+ PT Sbjct: 1 MDLNLLRVLDALLQENSVTRAAERLGTSPAAVSRTLARLRRTVGDPLLVRAGQGLVPTPR 60 Query: 70 GLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSV 126 + L + +RG + + + L++ F + L+ L + ++ Sbjct: 61 AVELREEVGALIRGCDNVLRPGAGFDAVHLQRTFTVQATDLLLVGLAGSLTERIHAEAP- 119 Query: 127 EIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRITD 186 +++ + + E L D+ + + + + L + I HP Sbjct: 120 QVDVVFLPEAVEGGP-GLRQGLVDVELGVLGHLDPEIRTRRLTRMPLVGIARTGHPLFDG 178 Query: 187 NSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLGI 246 + A + + + I + E + R+ + S + + TDL+ + Sbjct: 179 RIDARRFAAADHIGISRLGKRLGPIDSALAELGLRRRTAVVVPSHTSAMMLARDTDLVAL 238 Query: 247 VPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNES 299 + + L+ + L + L ++++ + + F + L + Sbjct: 239 SLADWIPDTIAAMGLRAFPVPLDLEPLDLGMAWHPRNSADPGHRWFREHLAAA 291 >UniRef50_A0KG94 Transcriptional regulator, LysR family n=5 Tax=Gammaproteobacteria RepID=A0KG94_AERHH Length = 318 Score = 268 bits (687), Expect = 1e-70, Method: Composition-based stats. Identities = 57/302 (18%), Positives = 113/302 (37%), Gaps = 20/302 (6%) Query: 17 IFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTTGLNLHHH 76 F+ + S+++AAE+L+I+ A+S +L RLR F DPL +R+ +G+ PT LH Sbjct: 14 AFDALMAQGSVTRAAETLFISQPAMSHALNRLRTFFGDPLLVRTPQGMLPTPRAQRLHLG 73 Query: 77 LEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSVEIECHDI 133 +++ LR LEQ ++ S+ K+ F++ + C LI+ L++ + + Sbjct: 74 VQQALRLLEQQLSDEEVFEPSQSKRRFVLCTTDYVECVLIPPLIQRLKRLAP-AVTIEIR 132 Query: 134 LMSAENAEELLVHRKADLVITQMPV--ISRSVICMPLHTIRNTLICSNRHPRI------- 184 ++ E L + DLV+ + + T + P Sbjct: 133 ILRDTLPEAELASGEIDLVLGFDEYMQVPGYLGKETWLTEPLAGLVRADLPMAAPALAES 192 Query: 185 -------TDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINS 237 + + Q++ + + +R IS S ++ Sbjct: 193 GDEPAILAERISLAQLIEMPHVFHSPLGTSEASLDRYLKTLGFSRTISVNSQSYMSAAAI 252 Query: 238 IAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLN 297 ++ +D L ++P + LK + L +P L ++ D + Sbjct: 253 VSQSDHLLVLPSMVAELLASHWPLKSLPLPEDVPDYHLNCVWHPVHAQQPALVWLKDLMK 312 Query: 298 ES 299 E Sbjct: 313 EL 314 >UniRef50_A0NZC9 LysR family regulatory protein n=3 Tax=Rhodobacteraceae RepID=A0NZC9_9RHOB Length = 305 Score = 268 bits (686), Expect = 2e-70, Method: Composition-based stats. Identities = 70/301 (23%), Positives = 124/301 (41%), Gaps = 7/301 (2%) Query: 4 LYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKG 63 + +L+ FDLNLLVIF I Q SIS AA + ++PSAVS +L RLR ND LF R+ +G Sbjct: 1 MVNLRSFDLNLLVIFRAIMQRGSISGAANEIGLSPSAVSHALARLRVMLNDELFFRTAEG 60 Query: 64 IAPTTTGLNLHHHLEKNLRGLEQTIN---IVNKSELKKNFIIYGPQLISCSNNSMLIRCL 120 ++PT L +E+ L + I+ +E + F + ++ L + L Sbjct: 61 VSPTERARELSVDIERGLSFISTAISLQHQFVPAETNRVFTMQVADYVAGFLLPRLAKRL 120 Query: 121 R-QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSN 179 + + + I+ +S E+ + + + + +T + V L ++ Sbjct: 121 QSEAPGITIDILPFSISPESVWDRVDMQ---VRLTPGRLQPEMVRSQRLLADEIVVLMRR 177 Query: 180 RHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIA 239 HPR+ + T E +L + G I+ + R + R ++ +S I + +A Sbjct: 178 GHPRVDEPMTAELYAELPHVKLSQSATGTTVIEDALAARGLKRHMAMTVASWFEIPDIVA 237 Query: 240 VTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNES 299 +DL+ I P L + L L + ++ + E Sbjct: 238 RSDLIAIAPQRLLSLDPRLGKLHSAPLPLDEVVFSFDLCWDLRKEREPGQKWLRQLIVEM 297 Query: 300 F 300 F Sbjct: 298 F 298 >UniRef50_P77746 Uncharacterized HTH-type transcriptional regulator ybdO n=94 Tax=Enterobacteriaceae RepID=YBDO_ECOLI Length = 300 Score = 268 bits (686), Expect = 2e-70, Method: Composition-based stats. Identities = 300/300 (100%), Positives = 300/300 (100%) Query: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS Sbjct: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 Query: 61 GKGIAPTTTGLNLHHHLEKNLRGLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCL 120 GKGIAPTTTGLNLHHHLEKNLRGLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCL Sbjct: 61 GKGIAPTTTGLNLHHHLEKNLRGLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCL 120 Query: 121 RQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNR 180 RQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNR Sbjct: 121 RQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNR 180 Query: 181 HPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAV 240 HPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAV Sbjct: 181 HPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAV 240 Query: 241 TDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 TDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF Sbjct: 241 TDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 >UniRef50_A8FU12 Transcriptional regulator n=2 Tax=Gammaproteobacteria RepID=A8FU12_SHESH Length = 304 Score = 268 bits (686), Expect = 2e-70, Method: Composition-based stats. Identities = 65/302 (21%), Positives = 123/302 (40%), Gaps = 6/302 (1%) Query: 2 ANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSG 61 N +L K DLNLL + + + +AA+ + ++ SA+S +L RLR F+D LFIR+ Sbjct: 1 MNENNLAKVDLNLLKSLRALIEERHVGRAAQKMNVSQSAMSHTLARLRGVFDDSLFIRNA 60 Query: 62 KGIAPTTTGLNLHHHLEKNLRGLEQTINI--VNKSELKKNFIIYGPQLISCSNNSMLIRC 119 KG+ PT + L L LR ++ + + S + +F I I S S + Sbjct: 61 KGLEPTARAIELSDKLRFILREIDSLLAPKTLELSHIHAHFRIQTHDFILASYLSKAFKR 120 Query: 120 LRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSN 179 + ++ DI + E A + L + +++I + L + Sbjct: 121 INHEAPN--ILIDIKILDETAYDKLDDGELEMIIGAGLQAKPRFMQKRLTDENLVCLLDK 178 Query: 180 RHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFM-NRKISFRGSSLLTIINSI 238 +P + N T E I + D + + RKI F +L + + Sbjct: 179 GNPVLK-NWTPETIFRYPHIKSSLLDDRDDPVSKYGKAMGLPKRKIGFLAETLNFQLPLL 237 Query: 239 AVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 + +DL+ +P + L + PLP + + +++ N++V +++ + Sbjct: 238 SDSDLIAFLPDSIAKKGSQVYGLVVKECPFPLPPLTIRAMWHERHQNDVVHQWIREKIED 297 Query: 299 SF 300 F Sbjct: 298 VF 299 >UniRef50_B4ELV6 LysR family regulatory protein n=1 Tax=Burkholderia cenocepacia J2315 RepID=B4ELV6_BURCJ Length = 306 Score = 267 bits (685), Expect = 2e-70, Method: Composition-based stats. Identities = 47/280 (16%), Positives = 111/280 (39%), Gaps = 6/280 (2%) Query: 24 HLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTTGLNLHHHLEKNLRG 83 S+++A L +T A S++L RLR +D + +R+ KG+ T +L + + L Sbjct: 23 ERSVTRAGMRLGLTQPAASRALGRLRTLLHDRVVVRTPKGLEFTPRAASLAQRVSRVLTE 82 Query: 84 LEQTINI--VNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSVEIECHDILMSAENAE 141 + + + + F I ++ + + L + + ++ D+ S N Sbjct: 83 AAGIVAPAVFDPATARGLFSIASLDHMALTLIPDVNARLERSAP-GLDL-DVPPSRSNNV 140 Query: 142 ELLVHRKADLVITQMPV--ISRSVICMPLHTIRNTLICSNRHPRITDNSTYEQIMAEEFT 199 EL+ A + + + + L+ I N HP ++ T ++ A Sbjct: 141 ELVTDGTAGIALGVFDDDTLPAGIYRRKLYDDNLVCIVRNGHPALSARLTPKRFAALSHV 200 Query: 200 QLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLGIVPYELYNSYRDFL 259 + G + + + + ++R+I+ R L +A +D+ ++P L + Sbjct: 201 LVTIGGRGGELVDAALARQGLHRRIAMRLPHFLVAPMVVAKSDMTLVLPQRLARHVALSM 260 Query: 260 NLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNES 299 + +KL +PS + +++ + ++ ++ E Sbjct: 261 PVTLVKLPVEVPSFSPSMIWHERTHDDPAHGWLRQQIVEV 300 >UniRef50_A0JW61 Transcriptional regulator, LysR family n=1 Tax=Arthrobacter sp. FB24 RepID=A0JW61_ARTS2 Length = 295 Score = 267 bits (685), Expect = 3e-70, Method: Composition-based stats. Identities = 63/297 (21%), Positives = 119/297 (40%), Gaps = 6/297 (2%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 + DLNL+ F IY+ S+++ A + IT +VS +L RLR Q DPLF R G+ P Sbjct: 1 MADLDLNLVKTFVSIYETRSLTQTAAEMCITQPSVSHALSRLRRQLGDPLFTRGAGGMTP 60 Query: 67 TTTGLNLHHHLEKNLRGLEQTIN---IVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQD 123 T + L + +L ++ I+ + + + F + L + L++ L Sbjct: 61 TRVAVELFSTFKASLNAIDLAIDGTRDFDPTTSSRTFRLCLSDLGEMAFLPALMKRLLDS 120 Query: 124 SSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPR 183 + +I + M + E L H D I +P+ + + + + Sbjct: 121 AP-QIVLEVVPMQIDKVSEWLAHGAVDAAIASVPIGGA-IRSRVIDQEHYVCVLPDGAGG 178 Query: 184 ITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDL 243 + + T Q + SAG + EI + R I+ R + +A +L Sbjct: 179 LAEKMTLSQFTGMRHVVIDP-SAGHHLAEAEIAALGIERNIALRLHHFSVLPLVLAGQNL 237 Query: 244 LGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 IVP + + + L +L +PS + + +N ++ + F + + +S Sbjct: 238 AAIVPSRVARMFTEQAPLTIRELPFNVPSFDVSLYWNGTAPRSRALRWFHETVADSL 294 >UniRef50_A6V5Q0 MexT protein n=1 Tax=Pseudomonas aeruginosa PA7 RepID=A6V5Q0_PSEA7 Length = 308 Score = 267 bits (684), Expect = 3e-70, Method: Composition-based stats. Identities = 55/300 (18%), Positives = 117/300 (39%), Gaps = 6/300 (2%) Query: 3 NLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGK 62 N+ ++ + DLNLL+ F C+ S ++AA L++T AVS +L+RLR F D LFIRS Sbjct: 5 NVRNIARIDLNLLLTFHCLMSERSATRAAVVLHVTQGAVSAALRRLREHFGDELFIRSAS 64 Query: 63 GIAPTTTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRC 119 G+ PT + L + + L + + + + F I I ++ Sbjct: 65 GMQPTRKAMELAPRIAEALTSISGVLAAEPEFSPHDSSYVFNIALSDDIESYLAPCIVNA 124 Query: 120 LRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMP-VISRSVICMPLHTIRNTLICS 178 + + + ++ ++ L+ DLVI P + S L + + + Sbjct: 125 AAAE-GLGVSFAFHQSNSSLWKQSLLDPDMDLVICSEPKDFNTSYSSQVLFSSSYSCLFR 183 Query: 179 NRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSI 238 R + A ++ I + R+++ + ++++ Sbjct: 184 PRGSMAGAAIGLDDYFAANHVRISYDGR-RGFIDDLFESAGYARRVTASFTHFAGALSTL 242 Query: 239 AVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 +++ +P +Y ++L + P+PS + ++ ++ + N + E Sbjct: 243 MSGEVIATLPTFAAETYSRMMDLHCCPVPLPVPSFRCFMVWDVAKHNKTHHDWLRRFVGE 302 >UniRef50_Q2BMZ3 Putative transcriptional regulator, LysR family protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMZ3_9GAMM Length = 303 Score = 267 bits (684), Expect = 3e-70, Method: Composition-based stats. Identities = 46/285 (16%), Positives = 110/285 (38%), Gaps = 7/285 (2%) Query: 20 CIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTTGLNLHHHLEK 79 + + +++AAE L++T SA+S+ L +LR F+DPL IR G + L ++ Sbjct: 14 VMLEERHVTRAAERLHLTQSALSRQLSQLREHFSDPLLIREGNEYLLSARAKQLLPKIQA 73 Query: 80 NLRGLEQTI--NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLR-QDSSVEIECHDILMS 136 L +++ + + + ++ F ++ ++ LR + ++I M Sbjct: 74 ILTEVDELSEGDSFDPLQCRRRFSFACTDHVAQFIFPEILGRLRDEAPGIDITFE---MW 130 Query: 137 AENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRITDNSTYEQIMAE 196 L D+ T + +V + + + + HP + E+++ Sbjct: 131 RPEWLGRLGQLPLDIASTTTANLPENVRSIHIGQDSPVCLMAENHPLAACELSIEKMLEY 190 Query: 197 EFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLGIVPYELYNSYR 256 F +L S ++ + R+I + ++ + LL I+P+ + + Sbjct: 191 PFLRLNSGGDKDSFFDKALESMGLQRRIQYEVPFFSAAFQALEGSSLLMILPHHIAMNAL 250 Query: 257 DFLNLKEIKLEH-PLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 + L +L +P + ++ +++ + S + E Sbjct: 251 EHFPLAVAQLPLAEVPKNQYHMCWHEVHDQDPAHSWLRQLIAEVL 295 >UniRef50_B7X2W7 Transcriptional regulator, LysR family n=1 Tax=Comamonas testosteroni KF-1 RepID=B7X2W7_COMTE Length = 302 Score = 267 bits (683), Expect = 4e-70, Method: Composition-based stats. Identities = 51/278 (18%), Positives = 99/278 (35%), Gaps = 9/278 (3%) Query: 24 HLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTTGLNLHHHLEKNLRG 83 +IS+A E L+++ A+S +L RLR F D L G+ + T L L + + L Sbjct: 20 ERNISRAGERLHLSQPAMSNALARLRNFFGDELLASQGRQMVLTPRALGLIEPVREVLMR 79 Query: 84 LEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDS-SVEIECHDILMSAEN 139 ++ TI + +E + F++ + L+ L Q + + +E + + Sbjct: 80 IDSTITTPPLFDPTESTRTFVLLLSDFTTAVFIPPLLEALYQQARGIGLELRSLN---DK 136 Query: 140 AEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRITDNSTYEQIMAEEFT 199 E L ADL+I + PL + + H RI + T+ + Sbjct: 137 PAEQLEQGDADLLIIPEQFAAVDHPRAPLFEEQYLCVTWANHSRIREELTFNDYLECGHV 196 Query: 200 QLIS-KSAGVDDIQ-MEIDERFMNRKISFRGSSLLTIINSIAVTDLLGIVPYELYNSYRD 257 +D +NRK+ S+ + + TD + V L Sbjct: 197 VANYATGQQRAAFDGWFLDRFGINRKVEVSAPSMAALPQMVVGTDRIATVHRRLALQAEK 256 Query: 258 FLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDR 295 L +K +P + + +++ + + Sbjct: 257 VLPIKLWPPPLEVPMLVQTLQWHRHRDADPALQWMREL 294 >UniRef50_D0RZK6 Transcriptional regulator n=1 Tax=Acinetobacter calcoaceticus RUH2202 RepID=D0RZK6_ACICA Length = 303 Score = 267 bits (683), Expect = 4e-70, Method: Composition-based stats. Identities = 64/307 (20%), Positives = 130/307 (42%), Gaps = 11/307 (3%) Query: 1 MANLYDL-KKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIR 59 M ++ L FDLNLL++F +YQH +++KAAE+L+I+PSA S +L RLR DPLF+R Sbjct: 1 MNFMHGLPHGFDLNLLLVFNALYQHKNVAKAAETLFISPSAFSHALNRLRDTLQDPLFVR 60 Query: 60 SGKGIAPTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSML 116 + PT + + L L Q + + + + F+I + + S +L Sbjct: 61 MNGEMKPTKKSEEIAPSISNCLSTLSQNLFKNSDFDYATSDYEFVIAATEYTAFSVMPLL 120 Query: 117 IRCLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPV---ISRSVICMPLHTIRN 173 ++ LR + I+ I + + + + L+ K D VI + + R Sbjct: 121 VKHLRTIAP-NIKIKIISENKQCSIDELMLGKIDFVIGYSELSEGSPNHLEVFQCFADRY 179 Query: 174 TLICSNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLT 233 +I I + E ++ + ++ S + I + + + R+I ++ Sbjct: 180 VVIAPKN---IYQSMNLESFISAQHIRVSSWNEHYGVIDQSLKKMGIRRQICVEVPHVML 236 Query: 234 IINSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFI 293 + +L+ +P + ++ + + +L +P ++ + + S + Sbjct: 237 APYMMQSAELIVTLPLKAVDAIKKNHEIDIFELPFSVPEYQVNVYSVEKSKLKACQIWLV 296 Query: 294 DRLNESF 300 D + F Sbjct: 297 DEILSLF 303 >UniRef50_B5XRQ2 Transcriptional regulator, LysR family n=4 Tax=Klebsiella RepID=B5XRQ2_KLEP3 Length = 307 Score = 267 bits (683), Expect = 5e-70, Method: Composition-based stats. Identities = 61/299 (20%), Positives = 120/299 (40%), Gaps = 4/299 (1%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 D + DLNLL + +Y+ S+++ AE L++ A+S +L+RLR F+DPLF+RS +G+ Sbjct: 7 NDFSRIDLNLLTVLMVLYREASVTRTAEVLHLGQPAISGALKRLREMFDDPLFVRSARGM 66 Query: 65 APTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 PT L L+ + L + + ++ F I L+ L Sbjct: 67 LPTPRAQALMTDLQPLMENLHSAMFGAGEFVPARAQQLFRIGLSDWSEHWLMPQLLPGLM 126 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 Q++ + I +LL + D+ ++ V+ P+ T+ T + S + Sbjct: 127 QEAP-GVSLQSIAADPFQVRQLLEEERIDVAVSVNKQSRGEVVSEPVMTMGVTTLWSPQQ 185 Query: 182 PRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVT 241 + +A E + + G +I ++ + + R++ F + T + Sbjct: 186 IPCRGPLSVSDFVAWEHVMVAYRETGHGEIDRQLASQGLARRVRFATQNFSTFPLLLTTL 245 Query: 242 DLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 L VP L ++ L+ P L I +K + + + +L ++ Sbjct: 246 PLFATVPQGLAQRWQAQHALRADAPPVTYPEFTLCILRHKRRAQDPALNWLVTKLKQAM 304 >UniRef50_B8IVY8 Transcriptional regulator, LysR family n=4 Tax=Proteobacteria RepID=B8IVY8_METNO Length = 341 Score = 266 bits (682), Expect = 6e-70, Method: Composition-based stats. Identities = 50/316 (15%), Positives = 115/316 (36%), Gaps = 24/316 (7%) Query: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 L + DLNL+ +F+ + + +++A +SL ++ SAVS L+RLR D LF+R+ +G+ P Sbjct: 12 LNRLDLNLIRLFDAVMRERHVARAGQSLGLSQSAVSHGLRRLRTLIGDDLFVRTVQGMEP 71 Query: 67 TTTGLNLHHHLEKNLRGLEQTINI--VNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDS 124 T L + + L +E I + + + F + I+ L+R ++ Sbjct: 72 TPRALAMAVQVRDALTAIEGAIGPQRFDPASSTRQFRLAATDHITAVVAPALMRTFETEA 131 Query: 125 SVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRI 184 + + + + + D+V+ I + L R+ L+ + HP Sbjct: 132 PLA-SILIRPATRIDLTMQVDLGQIDIVVGIFSQIPHRLHARTLFEDRDVLVTAPDHPEA 190 Query: 185 TDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRK-------------------IS 225 + + + + + ER + R+ Sbjct: 191 GGATDIRTLARDPLMVVTVGGTEDGLPDGRLSERGLTRQTEMFDRDALNRAFRAAGLVPR 250 Query: 226 FRG--SSLLTIINSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSS 283 L + + +A + + IVP L + + + ++ + + +++ Sbjct: 251 LSVLQPHFLAVPSLLADSRRVAIVPASLAHGFEAAGVARVSMPPWEPRTMAVQMVWHERW 310 Query: 284 LNNLVFSRFIDRLNES 299 + + + L + Sbjct: 311 RQDPAHAWLREALFRA 326 >UniRef50_A6GJJ5 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GJJ5_9DELT Length = 304 Score = 266 bits (682), Expect = 6e-70, Method: Composition-based stats. Identities = 53/286 (18%), Positives = 102/286 (35%), Gaps = 8/286 (2%) Query: 21 IYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTTGLNLHHHLEKN 80 + + ++++AA +L I+ A+S L RLR +F+DPL + SG G+ PT L L + + Sbjct: 2 LVREGNVTRAARALGISQPAMSHRLARLRERFDDPLLLPSGAGMQPTARALQLVEPVARG 61 Query: 81 LRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSVEIECHDILMSA 137 L + + + + F I + L ++ EIE Sbjct: 62 LLEFDAALRSEARFDPRTSTRRFTIACADFGDFVVLPRALSRLHAEAP-EIEVRMCRPGP 120 Query: 138 ENAEELLVHRKADLVITQMPVISR-SVICMPLHTIRNTLICSNRHPRITDNSTYEQIMAE 196 E E L D+ + P + + + R HP + + +A Sbjct: 121 E-LERGLERGLIDVAVLGNPCLPAANFRQRRVLDGRFATTVRADHPAVGPRMDLDTFVAL 179 Query: 197 EF--TQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLGIVPYELYNS 254 S+S I + R+++ R S T + +DL+ P + Sbjct: 180 PHLAIAPSSESDFGGVIDDALARVGEARRVAVRVPSYSTAPLLASRSDLVLTAPVGVILE 239 Query: 255 YRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 F++L+ P+P + + +++ + L E Sbjct: 240 AASFVSLRVFDPPLPIPPSDVRMVWHERWQREPGHAWLRTTLAEVM 285 >UniRef50_A4WEP5 Transcriptional regulator, LysR family n=1 Tax=Enterobacter sp. 638 RepID=A4WEP5_ENT38 Length = 308 Score = 266 bits (681), Expect = 6e-70, Method: Composition-based stats. Identities = 48/277 (17%), Positives = 107/277 (38%), Gaps = 4/277 (1%) Query: 23 QHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTTGLNLHHHLEKNLR 82 + S+S+AAE L++ AVS +L RLR FNDPLF+R+ G+ PT L L + Sbjct: 25 REGSVSRAAEKLHLGQPAVSNALARLREMFNDPLFVRTAGGMIPTPRAEALIAELGPLME 84 Query: 83 GLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSVEIECHDILMSAEN 139 ++ + + F + + L + +++ I Sbjct: 85 QMQHVLFQPASFTPASASHVFRLGMSDWVESWLMPELQAYVIREAP-GITLQVSASDPFR 143 Query: 140 AEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRITDNSTYEQIMAEEFT 199 + ++ R+ DL I+ + ++ + ++ + + + T + + + Sbjct: 144 DGKQVLQREIDLAISVGQSTAATLRRENIRSLNFSTLWHPEQLSLAAPLTVKNYVEHDHV 203 Query: 200 QLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLGIVPYELYNSYRDFL 259 + + + I ++ + +RK+ + ++ + L VP L ++ Sbjct: 204 LVSYRGSAWSAIDDQLALQGQSRKVRYVTPHFSSLPPLLKRIPALATVPSGLAAAWVTHY 263 Query: 260 NLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRL 296 L+ + P I L + ++K S N++ + L Sbjct: 264 GLRCSPVPIQTPEIPLSLLWHKKSDNDMPLNWLRGVL 300 >UniRef50_B9K150 Transcriptional regulator LysR family n=1 Tax=Agrobacterium vitis S4 RepID=B9K150_AGRVS Length = 318 Score = 266 bits (681), Expect = 7e-70, Method: Composition-based stats. Identities = 54/298 (18%), Positives = 112/298 (37%), Gaps = 5/298 (1%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 K DLNLLV + + + ++S+AAE ++IT SA+S +L RLR F+DPL I+ G+ + Sbjct: 1 MRFKNLDLNLLVALDTLIRVRNVSRAAEEMFITQSAMSNALGRLRDYFDDPLLIQVGRSM 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 + +L L + +E + E ++ + + +R + Sbjct: 61 ELSPLAASLELPLRDIIVRIEAAVVSTPSFIPHESTRSINLIVSDYTLNTIMPPFLRQVT 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 + ++ H LL +ADL++ S + P + + Sbjct: 121 ALAP-GVQIHFQPQ-QNYPHLLLERGEADLLVAPSDFCSTNHPSEPFLEDQICCVVDVNG 178 Query: 182 PRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVT 241 P T + + + + G Q D + K+ S ++ I + Sbjct: 179 PLAEGPMTEKDFLEAGHVVMQPPNGGETFAQRACDRLGLKIKVEASTFSFSSLPFLIRGS 238 Query: 242 DLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNES 299 + +V L + ++ + PLP + + ++ + F +++E+ Sbjct: 239 KRIAMVQRSLAECMLNLGGIRIMDPPFPLPPLLQCLQWHSYRTRDPALVWFRSQMHEA 296 >UniRef50_B1MJW3 Putative transcriptional regulator, LysR family n=1 Tax=Mycobacterium abscessus ATCC 19977 RepID=B1MJW3_MYCA9 Length = 295 Score = 266 bits (681), Expect = 8e-70, Method: Composition-based stats. Identities = 56/294 (19%), Positives = 118/294 (40%), Gaps = 7/294 (2%) Query: 10 FDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTT 69 DLNLL + + + Q S++ AAE L +P AVS+SL RLR D L +R+G+G+ PT Sbjct: 1 MDLNLLRVLDALLQENSVTAAAERLATSPPAVSRSLGRLRRITGDALLVRAGQGLVPTPR 60 Query: 70 GLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSV 126 + + L LR +Q + + +L++ FI+ +L + L+ LR D+ Sbjct: 61 AVQIRDELGGLLRRADQILRPGAEFDPGKLQRTFIVQAAELFLTALAVPLLERLRHDAP- 119 Query: 127 EIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRITD 186 + + E+ L D+ + + + P+ + + + HP Sbjct: 120 GVNVVFAPEAREDTG-ALRRGDIDIELGSLDHLDPETRHTPVAMLPMVGVAAQDHPLFEG 178 Query: 187 NSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLGI 246 + + I + + R++ S + + + L+ + Sbjct: 179 PIDAGTFATYGHISVSRRGKLYGPIDEALARHGLRRRVPVVVPSHTSAMLLARSSRLIAL 238 Query: 247 VPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 ++ L ++ + LP++ + ++++ + ++ + L ESF Sbjct: 239 TVAGSVDTAG--LGIRMFDIPLELPAVAVGVAWHPRNNDDAAHTWLRGLLIESF 290 >UniRef50_C4V039 Transcriptional regulator, LysR family n=4 Tax=Enterobacteriaceae RepID=C4V039_YERRO Length = 337 Score = 266 bits (680), Expect = 8e-70, Method: Composition-based stats. Identities = 64/302 (21%), Positives = 128/302 (42%), Gaps = 6/302 (1%) Query: 1 MANL--YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFI 58 M N+ D + DLNLL + +++ S+++AAE L++ AVS +L RLR FNDPLF+ Sbjct: 5 MNNIRENDFSRIDLNLLTVLLVLHREGSVTRAAERLHLGQPAVSGALARLRIMFNDPLFV 64 Query: 59 RSGKGIAPTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSM 115 RS KG+APT L L + ++Q + N + F + + Sbjct: 65 RSAKGMAPTPRAETLIASLLPMMEQMKQVLFQPPTFNPATDAHTFRLGMSDWVERWLMPG 124 Query: 116 LIRCLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTL 175 L+ L +++ I+ + EEL+ K D+ I+ I +I P+ + Sbjct: 125 LLATLAREAP-GIQLQMMASDPFLDEELVQLDKVDVAISVGQGIPAGMIREPVVRMGFCT 183 Query: 176 ICSNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTII 235 + +T + E+ +A + + + A I ++ + + R++ + ++ Sbjct: 184 LWHPLQLALTSPLSLEEYIAHDHLLVSYRGASHSQIDEQLARKNLTRRVRYVTPHFSSLP 243 Query: 236 NSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDR 295 + L VP L + + + L + P+ L + ++ ++ +++ Sbjct: 244 LMLKQIPALTTVPAGLASGWVEHYGLSRSAVPVSAPAFTLSLMWSTRRSHDPALLWLLEK 303 Query: 296 LN 297 L Sbjct: 304 LR 305 >UniRef50_C3MFM7 Putative transcriptional regulator, LysR family n=1 Tax=Rhizobium sp. NGR234 RepID=C3MFM7_RHISN Length = 409 Score = 266 bits (680), Expect = 9e-70, Method: Composition-based stats. Identities = 67/304 (22%), Positives = 123/304 (40%), Gaps = 11/304 (3%) Query: 4 LYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKG 63 L +L FDLNLL +F+ + + S+++A + + ++ AVS +L+RLR +D LFIR G Sbjct: 42 LVNLNAFDLNLLRVFDALIRERSVTRAGDQIGLSQPAVSSALRRLRDLLDDQLFIRRGND 101 Query: 64 IAPTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCL 120 + PT L L + L +E + + + +++ F + G + S S L RC Sbjct: 102 MIPTPRALELGSPVRDALGKIELALHKRRHFDPATIQRRFTLLGSDIFSVMAMSALSRCC 161 Query: 121 RQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNR 180 +++ I H + + NAE LL D+ + + V MPL ++ S R Sbjct: 162 AEEAP-GISLHLVDSALGNAERLLQEDAVDIALETELNVPDWVSSMPLLAAPYVVVASAR 220 Query: 181 HP-------RITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLT 233 HP + + S + E+ + R ++ L Sbjct: 221 HPGITAAGVAAREAIPLDLFCRLHHVARSSAGVVNCVVDAELAKVGRKRHVALTMPHTLG 280 Query: 234 IINSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFI 293 + + A + L VP + L LK + PLP+ + + ++ + Sbjct: 281 VAVATANSLHLATVPRQFAELMASHLGLKIYEAPVPLPATNINVFWHSRHDGDPAHQWLR 340 Query: 294 DRLN 297 ++ Sbjct: 341 RQIV 344 >UniRef50_A3VA58 Transcriptional regulatory protein n=2 Tax=cellular organisms RepID=A3VA58_9RHOB Length = 310 Score = 265 bits (679), Expect = 1e-69, Method: Composition-based stats. Identities = 55/294 (18%), Positives = 107/294 (36%), Gaps = 5/294 (1%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 KK DLNLLV + + +H S+++AA ++++ SA+S +L RLR F+DPL ++ G+ + Sbjct: 1 MRFKKLDLNLLVALDHMLEHRSVTEAAGRMFMSQSAMSNALTRLRTYFDDPLLVQVGRRM 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTIN---IVNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 T L + L +E I+ + + F + + R L Sbjct: 61 ELTPRAEALRPAIRDVLVRVEAAIDRGPQFEPDQSDRTFNLLLSDYSLRVLMPTMFR-LA 119 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 D + + ++ + + DL+I P +S L+ R ++ + Sbjct: 120 DDQNATVRF-NLRAQEIAPYNQIERGEVDLLIAPEPFVSPDHPSTLLYEDRYVVVAWAKG 178 Query: 182 PRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVT 241 T A ++ I + R++ S ++ I T Sbjct: 179 KYGTGPMDSRAYEAAGHVVMVPPQQAQTVDGRLIAGGGLTRRVEATTFSFASLPYLITGT 238 Query: 242 DLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDR 295 + + V L + +L L P ++ I ++ + S D Sbjct: 239 NRIATVHGRLAALMMNEADLVSYSLPVEAPPLRQMIQWHMLRDGDPGLSWLRDL 292 >UniRef50_A5V6I2 Transcriptional regulator, LysR family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V6I2_SPHWW Length = 301 Score = 265 bits (679), Expect = 1e-69, Method: Composition-based stats. Identities = 69/296 (23%), Positives = 119/296 (40%), Gaps = 6/296 (2%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 + DLNLLV F+ + +H S+S AAE+++++ SA+S +L RLRA F+D L + G+ + Sbjct: 1 MRFQGLDLNLLVAFDTLAEHRSVSLAAEAMHLSQSAMSAALARLRAYFDDELLVPRGRTL 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 T L + L + TI + E K+ F I + +R Sbjct: 61 VLTPRAEQLAPEVRDTLLRIHATIAHPAAFDPIETKREFTIVASDYVQAVLLEPFMRKAA 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 + + + +S + + DL+I VI L LICS H Sbjct: 121 HHAP-GMRFRILPISQQGI-DEFKRGVIDLIIVADSVILPEHPSQKLFEDEAKLICSADH 178 Query: 182 PRITDNSTYEQIMAEEFTQLISKSAGVD-DIQMEIDERFMNRKISFRGSSLLTIINSIAV 240 P I D + EQ + + ER + R+I + + + ++ Sbjct: 179 PTIGDEISMEQFGTVGHVTTSLHHHRPGSLFDLMLLERSIARRIEIQVPAFSMMAGAVVG 238 Query: 241 TDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRL 296 T+ + I+ L SY L +K + L LP I+ I ++ + ++ L Sbjct: 239 TERVAILHARLATSYARILPIKLLSLPFALPPIREVIQWHALRQRDRGLQWLLEAL 294 >UniRef50_Q4KCL9 Transcriptional regulator, LysR family n=15 Tax=Proteobacteria RepID=Q4KCL9_PSEF5 Length = 311 Score = 265 bits (679), Expect = 1e-69, Method: Composition-based stats. Identities = 57/303 (18%), Positives = 120/303 (39%), Gaps = 6/303 (1%) Query: 2 ANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSG 61 N ++ DLNLL FE ++ S S+AA L +T SA+S +L+RLR + DPLF+R+G Sbjct: 1 MNQMNIASVDLNLLKAFEALHDESSASRAALRLGVTQSAMSAALRRLRELYGDPLFVRTG 60 Query: 62 KGIAPTTTGLNLHHHLEKNLRGLEQTINIVNKSELK---KNFIIYGPQLISCSNNSMLIR 118 +G+APT L + + L Q++ +V ++ + + +I Sbjct: 61 RGLAPTLKANQLKPVVSEALNKCRQSLAMVAPDTADYQGRSVTLGLSDDFEIAYGRQMIE 120 Query: 119 CLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICS 178 + + + ++ ++ E L+ R DL I+ R + L + Sbjct: 121 AVARRAP-KLRLIFRQSHSQIVAEALLQRSVDLAISAGGFAERLLSRQVLGEGHYLCLAD 179 Query: 179 NRHPR-ITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINS 237 + E+ +A E + S+ + + ++R++ + + Sbjct: 180 PASLAPGQQQISLEEFVAREHLLVSSQG-FIGITDEGLANLGLSRQVCASTTHFAALPFL 238 Query: 238 IAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLN 297 + + + +P + L+ + LP + + + S + + + + + Sbjct: 239 LKGSQAVATIPAHAARRIAELTGLQLLPCPLALPRYPIELGWRTSPQTDPLLVKVREAIV 298 Query: 298 ESF 300 ESF Sbjct: 299 ESF 301 >UniRef50_Q38ZY8 Transcriptional regulator, LysR family n=1 Tax=Burkholderia sp. 383 RepID=Q38ZY8_BURS3 Length = 310 Score = 265 bits (678), Expect = 1e-69, Method: Composition-based stats. Identities = 55/300 (18%), Positives = 116/300 (38%), Gaps = 4/300 (1%) Query: 3 NLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGK 62 + +DL+ FD+NLL+ F+ + Q S+++AA L I A+S SL LR D LFIR G+ Sbjct: 5 DHFDLRSFDMNLLIAFDALMQERSVTRAAAKLRIQQPAMSHSLSTLRLLLRDELFIRVGR 64 Query: 63 GIAPTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRC 119 + PT L+L H + +L L++ + + S +++F + I ++ Sbjct: 65 TLQPTPRALSLQHTVRSSLLQLQEALKTEESFDPSNARRDFRVAMTNGIESLLLPDMVAR 124 Query: 120 LRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSN 179 R D+ + + ++ ++L + +L I + L T + Sbjct: 125 FRTDA-QGMTLLARSVDPQDMPDMLDRGELNLAIGCYESTHPWIRRHELFNETLTCCFNP 183 Query: 180 RHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIA 239 I + + + ++ + ++ + + + I G + L ++ A Sbjct: 184 DLLPIKTPIDEQTYVETPHVVVSMRNTILGCLEDALRDARVELNIVSAGPNFLAVLMMAA 243 Query: 240 VTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNES 299 T +L +P + Y D L + + + + ++ + E Sbjct: 244 DTPVLTTLPSRIALRYADRFGLSTCPVPISFSANPIAMVWHAREDREPGSEWLRRLVREL 303 >UniRef50_P55359 Nodulation protein D 1 n=250 Tax=Proteobacteria RepID=NODD1_RHISN Length = 322 Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats. Identities = 48/298 (16%), Positives = 115/298 (38%), Gaps = 6/298 (2%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 K DLNLLV + + ++ AA S+ ++ A+S ++ RLR F D LF +G+ + Sbjct: 1 MRFKGLDLNLLVALDALMTERKLTAAARSINLSQPAMSAAITRLRTYFRDELFTMNGREL 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 PT L + + L + +I + N ++ ++F I ++ ++ + Sbjct: 61 VPTPRAEALAPAVREALLHIHLSIISWDPFNPAQSDRSFRIILSDFMTLMFLERVVVRVA 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRH 181 +++ + + S + +ELL D +I +S + L R + + Sbjct: 121 REAP-AVSFELLPFS-DEPDELLRRGDVDFLILPEMFMSHTHPRAKLFDERFVCVSCPTN 178 Query: 182 PRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVT 241 ++ + + ++ + + E + R++ I + ++ T Sbjct: 179 QKLPPQLSIDNYVSMGHVAAQFGKQRPSVEEWLLREHGLRRRVEVAVPGFTMIPSFLSGT 238 Query: 242 DLLGIVPYELYNSYRDFLNLKEIKLEHPL-PSIKLYISYNKSSLNNLVFSRFIDRLNE 298 D + +P L + + L+ +L P+ P+ + + ++ + + Sbjct: 239 DRIATLPLRLAMHFAKAIPLRITELPQPIFPAFTEAVQWPAPHSSDPASLWMREIFLQ 296 >UniRef50_Q122D0 Transcriptional regulator, LysR family n=1 Tax=Polaromonas sp. JS666 RepID=Q122D0_POLSJ Length = 310 Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats. Identities = 59/303 (19%), Positives = 113/303 (37%), Gaps = 9/303 (2%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 + ++ DLNLL + I++ S++ A ++L ++ A S +L RLR F D LF+R+ G+ Sbjct: 1 MNFRQLDLNLLRVLAAIHRTGSVTHAGKALSLSQPATSNALARLRDFFGDELFVRAPSGL 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 PT L + L LE + + ++ + L L LR Sbjct: 61 KPTRLCEQLAPAVLAQLLALETVVTGHEEFEAAHSDMHWRLSLSDLGEMLFLPALAGALR 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLIC---- 177 + +I ++A + L R+ DL I + R + L + Sbjct: 121 SQAP-GARLSNISVAANDVAAALEAREIDLAIGILQPRQRGIRTELLFRENYVAVASPQW 179 Query: 178 SNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINS 237 R T +Q+ F + ++ + + +I R + + Sbjct: 180 RPASGRSGRTLTTQQLAEAAFVVASPTATFHGSVEQMLVRMKLQDRIVLRARHFGALPDL 239 Query: 238 IAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLN 297 TDLL IVP + R + + + PS ++ + ++ S+ N+ + Sbjct: 240 ALATDLLSIVPEMYARNLRQRYDFRVWGIPGA-PSYEVRLVWHSSTDNDPAHQWMRALVQ 298 Query: 298 ESF 300 + F Sbjct: 299 QLF 301 >UniRef50_C5A8T0 Transcriptional regulator, LysR family protein n=2 Tax=Proteobacteria RepID=C5A8T0_BURGB Length = 313 Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats. Identities = 62/302 (20%), Positives = 120/302 (39%), Gaps = 5/302 (1%) Query: 2 ANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSG 61 N ++ DLNLL +FE ++ S+AA L +T SAVS +L+RLRA + DPLF+R+G Sbjct: 1 MNAMNIADVDLNLLKVFEVLFDEGGASRAAIRLDLTQSAVSAALRRLRALYGDPLFVRTG 60 Query: 62 KGIAPTTTGLNLHHHLEKNLRGLEQTINIVNKSELK---KNFIIYGPQLISCSNNSMLIR 118 +G+APT L + + L Q++ + + + + LI Sbjct: 61 RGLAPTARARELKPLIGEALDRCRQSLAFGAPAPASFEGRAVSVAMSDDFEIAFGGRLIE 120 Query: 119 CLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICS 178 C + + + ++ + L +R+ DL I +R + M L R + Sbjct: 121 CAARLAP-GLRVIFRQTHSQIVGDALANREVDLAIAAGGFATRGLGHMALGHGRYACLVD 179 Query: 179 NRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSI 238 T + +A E + S V + + E R + + + + Sbjct: 180 PAAAPGRLVLTLDDFLAREHVLVSSGG-VVGIVDEALAEIGRRRTVRASTTHFAALPFLL 238 Query: 239 AVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNE 298 T + +P+ + L + +P+ + + + S+L + ++ + + Sbjct: 239 RGTPAVATIPHHAAEALARMTGLGLVACPLAMPAYPVALGWRVSTLRDAAVAKLRQAIVD 298 Query: 299 SF 300 SF Sbjct: 299 SF 300 >UniRef50_Q8KY13 LysR-type transcriptional activator n=1 Tax=Rhizobium sp. TAL1145 RepID=Q8KY13_9RHIZ Length = 320 Score = 264 bits (677), Expect = 2e-69, Method: Composition-based stats. Identities = 59/301 (19%), Positives = 112/301 (37%), Gaps = 6/301 (1%) Query: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 M + + L + DLNLL +F+ + Q S++KAA+ T SA+S SL RLR F D LF++ Sbjct: 1 MRSDFTLNQIDLNLLRVFDLLMQERSVTKAADRAGRTQSAISHSLNRLREIFGDELFVKR 60 Query: 61 GKGIAPTTTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLI 117 + PT L + + L +E ++ SE + F I S L+ Sbjct: 61 AGSMNPTAQARELATVITQALSDIEGVVSQRINFKPSESHRQFRIGVTDYTSALYLPTLL 120 Query: 118 RCLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMP-LHTIRNTLI 176 + + + A ELL D V+ P+I S I L Sbjct: 121 EEFNSKAP-NARLRIVPVYLYEAAELLSDPDLDCVLIGNPIIRESHIVETVLARHEMLCA 179 Query: 177 CSNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIIN 236 + + I D T E+ +A Q+ + ++R+++ + Sbjct: 180 AWSGNAVIKD-LTMEKYLAMPHLQISPDGDESGVSDKALATIGLSRRVAATIPYYMVAPK 238 Query: 237 SIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRL 296 + T ++ + + + + + LP +++ + Y ++ + + Sbjct: 239 VLRGTQMIAAFADGMLSLIDESSEILVTRPPLALPDVRVSLIYVRTKQTDAGHIWLRSCI 298 Query: 297 N 297 Sbjct: 299 R 299 >UniRef50_Q0JY95 Transcriptional regulator, LysR-family n=4 Tax=Proteobacteria RepID=Q0JY95_RALEH Length = 318 Score = 264 bits (677), Expect = 2e-69, Method: Composition-based stats. Identities = 56/298 (18%), Positives = 113/298 (37%), Gaps = 6/298 (2%) Query: 5 YDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGI 64 ++ DLNLL +F +YQ + S+AA + ++ A+S L RLR + DPLF+R+ +G+ Sbjct: 1 MNIGSKDLNLLYVFHVLYQEGNASRAAARMALSQPALSHKLNRLRDELGDPLFVRAPRGL 60 Query: 65 APTTTGLNLHHHLEKNLRGLEQTINI---VNKSELKKNFIIYGPQLISCSNNSMLIRCLR 121 PT L +++ + L+ + + ++ IY + L+ LR Sbjct: 61 TPTPRAHALAPQVQRLVGDLDAFYDACAGHDYLARSEHLHIYTTDYMEQLLLPALLPRLR 120 Query: 122 QDSSVEIECHDILMSAENAEELLVHRKADLVI-TQMPVISRSVICMPLHTIRNTLICSNR 180 + + E E L DL I + + L + ++ S Sbjct: 121 SQAP-GVVLVTHNTRGELPREELEKGTCDLAIAGFYENLPDTFHQQRLCSEDFVVLASRA 179 Query: 181 HPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAV 240 +PRI D + +A E + + + R++ SS L + Sbjct: 180 NPRIADGLDLDAFLACEHLLTTLTGDLNGVVDRALARQGHKRRVVAGLSSFLAPSRLVRG 239 Query: 241 TDLLGIVPYELY-NSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLN 297 T+LL + + +L + + LP + + ++ + + + ++ Sbjct: 240 TELLLTCLRSVAEEAVARDPDLVLLPVPFALPHVDMMQIWHARTDADRLRRWLRQQIQ 297 >UniRef50_D0FZR1 LysR-type transcriptional regulator n=2 Tax=Rhodococcus RepID=D0FZR1_9NOCA Length = 311 Score = 264 bits (677), Expect = 2e-69, Method: Composition-based stats. Identities = 62/303 (20%), Positives = 119/303 (39%), Gaps = 10/303 (3%) Query: 4 LYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKG 63 + DL+ DLNLLV + + S+++AA L ++ SA+S SL RLR F+DPL +R+G+ Sbjct: 1 MKDLRSVDLNLLVDLDALLSMRSVTEAARRLNLSQSAMSGSLSRLRRLFDDPLMVRNGRV 60 Query: 64 IAPTTTGLNLHHHLEKNLRGLEQTI---NIVNKSELKKNFIIYGPQLISCSNNSMLIRCL 120 + T L +++ L ++ + + ++F I + + L+R L Sbjct: 61 LVLTPRAEALIPPVKEILHQIDGVFAESDDFDPRTTTRSFSISASDYATAVVLAPLLRGL 120 Query: 121 RQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRS-VICMPLHTIRNTLICSN 179 D+ + + + S + +L ADLVI ++ S + + L + R + Sbjct: 121 ADDAP-NVTVNVLPRSP-DVPAVLRLDSADLVIEPREMMGDSPLPGVSLFSDRWVCMLDG 178 Query: 180 R-H-PRITDNSTYEQIMAEEFTQLISKSAGV-DDIQMEIDERFMNRKISFRGSSLLTIIN 236 H P + + + + + + R+I S L Sbjct: 179 SMHEPAVLARLERDHYLQLPHLVYSIGQDRQLNYADRHLASLGVRRRIELTVESFLMAPL 238 Query: 237 SIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRL 296 I T L+ +V + L+ + P+P I + +N + RL Sbjct: 239 LIRGTSLVSLVLERAASML-PLDGLRLVDPPIPVPGITDAMYWNPRHSEDPGHRWLRQRL 297 Query: 297 NES 299 ++ Sbjct: 298 ADT 300 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.315 0.192 0.616 Lambda K H 0.267 0.0590 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,125,361,921 Number of Sequences: 3077464 Number of extensions: 122796008 Number of successful extensions: 370883 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 17222 Number of HSP's successfully gapped in prelim test: 1083 Number of HSP's that attempted gapping in prelim test: 330359 Number of HSP's gapped (non-prelim): 18925 length of query: 300 length of database: 1,040,396,356 effective HSP length: 128 effective length of query: 172 effective length of database: 646,480,964 effective search space: 111194725808 effective search space used: 111194725808 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.0 bits) S2: 94 (40.3 bits)