BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (392 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P0ACI5 Xylose operon regulatory protein n=151 Tax=Gamma... 815 0.0 UniRef50_B3H2Y3 Xylose operon regulatory protein n=7 Tax=Gammapr... 478 e-133 UniRef50_P45043 Xylose operon regulatory protein n=26 Tax=Gammap... 464 e-129 UniRef50_B2JFF0 Transcriptional regulator, AraC family n=39 Tax=... 398 e-109 UniRef50_A4A1D2 Xylose operon regulatory protein n=3 Tax=Plancto... 228 3e-58 UniRef50_A6C615 Xylose operon regulatory protein n=1 Tax=Plancto... 218 3e-55 UniRef50_A3ZY76 Xylose operon regulatory protein n=1 Tax=Blastop... 213 8e-54 UniRef50_Q7UYL2 Xylose operon regulatory protein n=4 Tax=Plancto... 211 3e-53 UniRef50_B4CYR5 Transcriptional regulator, AraC family n=2 Tax=V... 207 6e-52 UniRef50_A6C3C2 Xylose operon regulatory protein n=2 Tax=Plancto... 202 1e-50 UniRef50_A6C655 Xylose operon regulatory protein n=1 Tax=Plancto... 202 2e-50 UniRef50_Q7UXA9 Xylose operon regulatory protein n=1 Tax=Rhodopi... 199 1e-49 UniRef50_D2R7D2 Transcriptional regulator, AraC family n=1 Tax=P... 193 8e-48 UniRef50_A4BCC5 PurR protein n=1 Tax=Reinekea blandensis MED297 ... 193 1e-47 UniRef50_A6CF05 Xylose operon regulatory protein n=1 Tax=Plancto... 189 1e-46 UniRef50_B5JFL8 Transcriptional regulator, AraC family protein n... 188 4e-46 UniRef50_C5BYV3 Transcriptional regulator, AraC family n=1 Tax=B... 186 1e-45 UniRef50_C1ZL78 Transcriptional regulator n=1 Tax=Planctomyces l... 181 5e-44 UniRef50_A6CCU7 Xylose operon regulatory protein n=1 Tax=Plancto... 179 2e-43 UniRef50_UPI000174642C xylose operon regulatory protein n=3 Tax=... 178 3e-43 UniRef50_Q7UHK5 Xylose operon regulatory protein n=2 Tax=Plancto... 177 5e-43 UniRef50_A6CDQ7 Xylose operon regulatory protein n=1 Tax=Plancto... 177 7e-43 UniRef50_Q7UHJ2 Xylose operon regulatory protein n=1 Tax=Rhodopi... 175 2e-42 UniRef50_A3ZQ62 Xylose operon regulatory protein n=1 Tax=Blastop... 175 3e-42 UniRef50_A6DIY5 Xylose operon regulatory protein n=1 Tax=Lentisp... 174 5e-42 UniRef50_A6C7I7 Xylose operon regulatory protein n=1 Tax=Plancto... 171 4e-41 UniRef50_B1ZWW6 Transcriptional regulator, AraC family n=4 Tax=O... 167 7e-40 UniRef50_B5JIB2 Transcriptional regulator, AraC family protein n... 166 1e-39 UniRef50_C0A9R7 Xylose operon regulatory protein n=1 Tax=Opituta... 166 2e-39 UniRef50_D1W5K7 Transcriptional regulator, AraC family n=1 Tax=P... 163 8e-39 UniRef50_D2QUQ8 Transcriptional regulator, AraC family n=1 Tax=S... 163 1e-38 UniRef50_Q64VG9 Transcriptional regulator n=8 Tax=Bacteroidales ... 163 1e-38 UniRef50_C1ZFQ8 Transcriptional regulator n=1 Tax=Planctomyces l... 162 2e-38 UniRef50_C6W1V7 Transcriptional regulator, AraC family n=1 Tax=D... 159 2e-37 UniRef50_B5JEL5 Transcriptional regulator, AraC family protein n... 157 6e-37 UniRef50_B4CUN0 Transcriptional regulator, AraC family n=1 Tax=C... 156 1e-36 UniRef50_B4D2S2 Transcriptional regulator, AraC family n=1 Tax=C... 155 2e-36 UniRef50_C0A646 Xylose operon regulatory protein n=1 Tax=Opituta... 152 1e-35 UniRef50_A3ZVD0 Xylose operon regulatory protein n=1 Tax=Blastop... 149 2e-34 UniRef50_C0A1Z9 Xylose operon regulatory protein n=2 Tax=Opituta... 149 2e-34 UniRef50_A3ZWC2 Xylose operon regulatory protein n=1 Tax=Blastop... 147 8e-34 UniRef50_UPI00019688DE hypothetical protein BACCELL_02763 n=1 Ta... 145 3e-33 UniRef50_A3ZWJ4 Xylose operon regulatory protein n=1 Tax=Blastop... 144 4e-33 UniRef50_A3ZSV8 Xylose operon regulatory protein n=1 Tax=Blastop... 144 6e-33 UniRef50_C3QXL3 Transcriptional regulator n=7 Tax=Bacteroides Re... 140 1e-31 UniRef50_A6DP72 Xylose operon regulatory protein n=1 Tax=Lentisp... 136 1e-30 UniRef50_B1ZT55 Transcriptional regulator, AraC family n=1 Tax=O... 136 2e-30 UniRef50_D1N410 Transcriptional regulator, AraC family n=1 Tax=V... 120 9e-26 UniRef50_C0AAZ9 Transcriptional regulator, AraC family n=1 Tax=O... 118 5e-25 UniRef50_Q6LUX9 Putative uncharacterized protein RB1454 n=1 Tax=... 116 1e-24 UniRef50_Q2C797 Xylose operon regulatory protein n=2 Tax=Photoba... 115 2e-24 UniRef50_C0A5R8 Transcriptional regulators-like protein n=1 Tax=... 114 4e-24 UniRef50_D2R9H5 Transcriptional regulator, AraC family n=1 Tax=P... 113 1e-23 UniRef50_UPI0001745892 xylose operon regulatory protein n=1 Tax=... 113 1e-23 UniRef50_C0ACC5 Transcriptional regulators-like protein n=1 Tax=... 111 4e-23 UniRef50_C0A5A7 AraC-type DNA-binding domain-containing protein-... 111 5e-23 UniRef50_Q6LUY4 Putative uncharacterized protein n=1 Tax=Photoba... 109 1e-22 UniRef50_B5JIL8 Transcriptional regulator, AraC family protein n... 108 4e-22 UniRef50_D1N888 Transcriptional regulator, AraC family n=1 Tax=V... 102 3e-20 UniRef50_C0AC48 Transcriptional regulators-like protein n=1 Tax=... 98 5e-19 UniRef50_A6DPD5 Xylose operon regulatory protein n=1 Tax=Lentisp... 92 4e-17 UniRef50_D1N1K4 Transcriptional regulator, AraC family n=1 Tax=V... 88 6e-16 UniRef50_UPI000174567C xylose operon regulatory protein n=1 Tax=... 81 7e-14 UniRef50_A4FN08 LacI-type transcriptional regulator n=2 Tax=Acti... 81 7e-14 UniRef50_A8SWS2 Putative uncharacterized protein n=1 Tax=Coproco... 79 3e-13 UniRef50_C4G2K3 Putative uncharacterized protein n=2 Tax=Firmicu... 79 4e-13 UniRef50_C3BQM4 Two component transcriptional regulator, AraC n=... 77 1e-12 UniRef50_D1PII7 Transcriptional regulator, AraC family n=1 Tax=S... 77 1e-12 UniRef50_C6JEQ5 Transcriptional regulator n=1 Tax=Ruminococcus s... 75 3e-12 UniRef50_Q848L6 TrrA n=1 Tax=uncultured bacterium RepID=Q848L6_9... 75 4e-12 UniRef50_C7GI55 Transcriptional regulator, AraC family n=2 Tax=L... 75 5e-12 UniRef50_C6J2H9 Response regulator n=1 Tax=Paenibacillus sp. ora... 75 6e-12 UniRef50_D1N9G4 Transcriptional regulator, AraC family n=1 Tax=V... 74 9e-12 UniRef50_A9U7M3 Predicted protein n=1 Tax=Physcomitrella patens ... 74 1e-11 UniRef50_A6B487 Arabinose operon regulatory protein n=3 Tax=Vibr... 73 2e-11 UniRef50_C4FXH3 Putative uncharacterized protein n=1 Tax=Catonel... 73 2e-11 UniRef50_C6D447 Transcriptional regulator, AraC family n=1 Tax=P... 72 3e-11 UniRef50_Q8ES65 Hypothetical conserved protein n=1 Tax=Oceanobac... 72 3e-11 UniRef50_B1KF96 Transcriptional regulator, AraC family n=2 Tax=A... 72 4e-11 UniRef50_D1PSQ0 AraC-type sugar metabolism regulator n=1 Tax=Sub... 72 4e-11 UniRef50_C6CRZ9 Two component transcriptional regulator, AraC fa... 71 5e-11 UniRef50_C7IHL5 Transcriptional regulator, AraC family n=1 Tax=C... 71 7e-11 UniRef50_A4ITD0 Sugar ABC transporter (Permease) n=3 Tax=Bacilla... 71 7e-11 UniRef50_C9BEC9 Transcriptional regulator n=2 Tax=Enterococcus f... 71 9e-11 UniRef50_C0Z9S9 Probable two-component response regulator n=1 Ta... 70 9e-11 UniRef50_C8N9B6 AraC family transcriptional regulator n=1 Tax=Ca... 70 9e-11 UniRef50_C0FRI6 Putative uncharacterized protein n=1 Tax=Rosebur... 70 9e-11 UniRef50_Q3IXB5 Transcriptional regulator, AraC family with amid... 70 1e-10 UniRef50_C3WEF1 Putative uncharacterized protein n=1 Tax=Fusobac... 70 1e-10 UniRef50_C9AXU1 Transcriptional regulator n=3 Tax=Enterococcus c... 70 1e-10 UniRef50_B8FML1 Transcriptional regulator, AraC family n=1 Tax=D... 70 1e-10 UniRef50_UPI0001788F31 transcriptional regulator, AraC family n=... 70 1e-10 UniRef50_C4Z3B2 Two-component system, response regulator YesN n=... 70 1e-10 UniRef50_A8RZF9 Putative uncharacterized protein n=1 Tax=Clostri... 70 1e-10 UniRef50_B1B7W8 Transcriptional regulator, AraC family protein n... 70 2e-10 UniRef50_C0D596 Putative uncharacterized protein n=2 Tax=Clostri... 69 2e-10 UniRef50_Q1WTL6 Transcriptional regulator, AraC family n=2 Tax=L... 69 2e-10 UniRef50_C8WRN2 Transcriptional regulator, AraC family n=2 Tax=A... 69 2e-10 UniRef50_B2A2D9 Transcriptional regulator, LacI family n=3 Tax=C... 69 2e-10 UniRef50_C6LAW9 Putative transcriptional regulator n=1 Tax=Bryan... 69 2e-10 UniRef50_C0X0R3 LacI family transcriptional regulator n=25 Tax=B... 69 2e-10 UniRef50_A0Q2M6 Transcriptional regulatory protein n=6 Tax=Clost... 69 3e-10 UniRef50_D1PQT3 Putative two-component response regulator n=1 Ta... 69 3e-10 UniRef50_A5V467 Transcriptional regulator, AraC family n=1 Tax=S... 69 3e-10 UniRef50_UPI0001968711 hypothetical protein BACCELL_00058 n=1 Ta... 69 3e-10 UniRef50_A6NS86 Putative uncharacterized protein n=1 Tax=Bactero... 69 3e-10 UniRef50_Q03DV2 Transcriptional regulator, AraC family n=1 Tax=P... 69 3e-10 UniRef50_Q7MC25 AraC-type DNA-binding domain-containing protein ... 69 3e-10 UniRef50_C6D127 Two component transcriptional regulator, AraC fa... 69 3e-10 UniRef50_UPI00017890F2 transcriptional regulator, GntR family wi... 69 3e-10 UniRef50_D2EI06 AraC family transcriptional regulator n=1 Tax=Pe... 69 4e-10 UniRef50_B2GEN0 Transcriptional regulator n=1 Tax=Lactobacillus ... 69 4e-10 UniRef50_Q2BFH4 Putative uncharacterized protein n=1 Tax=Bacillu... 69 4e-10 UniRef50_A8SS64 Putative uncharacterized protein n=1 Tax=Coproco... 68 5e-10 UniRef50_UPI0001C36264 transcriptional regulator, AraC family pr... 68 5e-10 UniRef50_UPI000178854F two component transcriptional regulator, ... 68 5e-10 UniRef50_C6IXM8 Two component transcriptional regulator n=1 Tax=... 68 5e-10 UniRef50_C6J2Y7 Transcriptional regulator (Fragment) n=1 Tax=Pae... 68 5e-10 UniRef50_A8VSW1 Propanediol utilization protein n=1 Tax=Bacillus... 68 5e-10 UniRef50_C9XKB1 AraC-family transcriptional regulator n=18 Tax=C... 68 5e-10 UniRef50_A4B8V7 Transcriptional regulator, AraC family protein n... 68 5e-10 UniRef50_C7G788 Transcriptional regulator, AraC family n=2 Tax=B... 68 6e-10 UniRef50_Q2B9I5 Putative uncharacterized protein n=1 Tax=Bacillu... 68 7e-10 UniRef50_Q5LPZ2 Transcriptional regulator, AraC family n=2 Tax=R... 68 7e-10 UniRef50_C4G5N9 Putative uncharacterized protein n=1 Tax=Abiotro... 68 7e-10 UniRef50_C9KJL3 AraC-type DNA-binding domain-containing protein,... 67 8e-10 UniRef50_C6D4A8 Two component transcriptional regulator, AraC fa... 67 9e-10 UniRef50_C5ETU0 Two component transcriptional regulator n=1 Tax=... 67 9e-10 UniRef50_D1PKE0 Transcriptional regulator, AraC/XylS family n=1 ... 67 9e-10 UniRef50_B1R4J4 Response regulator receiver protein n=3 Tax=Clos... 67 9e-10 UniRef50_P07642 Arabinose operon regulatory protein n=160 Tax=Pr... 67 9e-10 UniRef50_B1QZ71 Two-component response regulator n=2 Tax=Clostri... 67 1e-09 UniRef50_C7PFA7 Transcriptional regulator, AraC family n=1 Tax=C... 67 1e-09 UniRef50_A8VRA2 Methyl-accepting chemotaxis sensory transducer n... 67 1e-09 UniRef50_A8FI25 Response regulator n=2 Tax=Bacillus pumilus RepI... 67 1e-09 UniRef50_UPI0001C35BF7 two component transcriptional regulator, ... 67 1e-09 UniRef50_C8Q370 Transcriptional regulator, AraC family n=1 Tax=P... 67 1e-09 UniRef50_Q5WK40 Two-component response regulator n=1 Tax=Bacillu... 67 1e-09 UniRef50_C6LM61 Putative raffinose operon transcriptional regula... 67 1e-09 UniRef50_UPI0001B9ECE6 two component transcriptional regulator, ... 67 1e-09 UniRef50_B0MJZ2 Putative uncharacterized protein n=1 Tax=Eubacte... 67 1e-09 UniRef50_D2M228 Transcriptional regulator, AraC family n=1 Tax=B... 67 1e-09 UniRef50_B0A659 Putative uncharacterized protein n=1 Tax=Clostri... 67 1e-09 UniRef50_UPI0001789C33 transcriptional regulator, AraC family n=... 67 2e-09 UniRef50_C5EJY2 Predicted protein n=1 Tax=Clostridiales bacteriu... 67 2e-09 UniRef50_B8I4H6 Transcriptional regulator, AraC family n=1 Tax=C... 66 2e-09 UniRef50_C3JN73 Transcriptional regulator, AraC family n=1 Tax=R... 66 2e-09 UniRef50_A4BF96 Arabinose operon regulatory protein n=1 Tax=Rein... 66 2e-09 UniRef50_A8RQG1 Putative uncharacterized protein n=2 Tax=Clostri... 66 2e-09 UniRef50_A6E6Q9 Sensor protein n=1 Tax=Pedobacter sp. BAL39 RepI... 66 2e-09 UniRef50_UPI000178A97E transcriptional regulator, AraC family n=... 66 2e-09 UniRef50_UPI0001788C4E two component transcriptional regulator, ... 66 2e-09 UniRef50_C6D456 Transcriptional regulator, AraC family n=1 Tax=P... 66 2e-09 UniRef50_B7K731 Transcriptional regulator, AraC family n=2 Tax=C... 66 2e-09 UniRef50_UPI000178A020 transcriptional regulator, AraC family n=... 66 2e-09 UniRef50_A8SHV0 Putative uncharacterized protein n=1 Tax=Faecali... 66 3e-09 UniRef50_C6CWR9 Two component transcriptional regulator, AraC fa... 66 3e-09 UniRef50_C6J4K9 Two component transcriptional regulator n=1 Tax=... 66 3e-09 UniRef50_Q65NG7 Putative uncharacterized protein n=1 Tax=Bacillu... 66 3e-09 UniRef50_A0L3B8 Transcriptional regulator, AraC family n=2 Tax=G... 65 3e-09 UniRef50_C6D787 Transcriptional regulator, AraC family n=1 Tax=P... 65 3e-09 UniRef50_C0CVY3 Putative uncharacterized protein n=1 Tax=Clostri... 65 3e-09 UniRef50_C6CSB6 Two component transcriptional regulator, AraC fa... 65 3e-09 UniRef50_C4FNR5 Putative uncharacterized protein n=1 Tax=Veillon... 65 3e-09 UniRef50_C0A314 Transcriptional regulator, AraC family n=2 Tax=O... 65 3e-09 UniRef50_UPI0001C36936 two component transcriptional regulator, ... 65 3e-09 UniRef50_B0NHY9 Putative uncharacterized protein n=2 Tax=Clostri... 65 3e-09 UniRef50_C1P7P5 Transcriptional regulator, AraC family n=1 Tax=B... 65 3e-09 UniRef50_Q7M9P2 BH0401 PROTEIN n=1 Tax=Wolinella succinogenes Re... 65 3e-09 UniRef50_B0RRS5 Transcriptional regulator, AraC family n=5 Tax=G... 65 4e-09 UniRef50_A6TTZ3 Response regulator receiver protein n=1 Tax=Alka... 65 4e-09 UniRef50_C6CVB2 Two component transcriptional regulator, AraC fa... 65 4e-09 UniRef50_A8SRM1 Putative uncharacterized protein n=1 Tax=Coproco... 65 4e-09 UniRef50_A8EWB5 Transcriptional regulator, AraC family n=4 Tax=C... 65 4e-09 UniRef50_C8WH60 Transcriptional regulator, AraC family n=1 Tax=E... 65 4e-09 UniRef50_A7B8B1 Putative uncharacterized protein n=1 Tax=Ruminoc... 65 4e-09 UniRef50_A7B2G1 Putative uncharacterized protein n=1 Tax=Ruminoc... 65 5e-09 UniRef50_A0Y392 Transcriptional regulator, AraC family protein n... 65 5e-09 UniRef50_C2FPL8 Transcription regulator n=2 Tax=Lactobacillus pl... 65 5e-09 UniRef50_B7DU32 Transcriptional regulator, AraC family n=1 Tax=A... 65 5e-09 UniRef50_UPI0001788513 transcriptional regulator, AraC family n=... 65 5e-09 UniRef50_D0I8W0 Transcriptional regulator AraC family n=1 Tax=Gr... 65 5e-09 UniRef50_B0NF43 Putative uncharacterized protein n=1 Tax=Clostri... 65 5e-09 UniRef50_A5KPH1 Putative uncharacterized protein n=1 Tax=Ruminoc... 65 6e-09 UniRef50_UPI00017885E1 two component transcriptional regulator, ... 65 6e-09 UniRef50_A4BFF7 Putative uncharacterized protein n=1 Tax=Reineke... 65 6e-09 UniRef50_UPI00017896CE two component transcriptional regulator, ... 65 6e-09 UniRef50_C7IHS7 Transcriptional regulator, AraC family n=1 Tax=C... 65 6e-09 UniRef50_C6IPT3 Transcriptional regulator n=3 Tax=Bacteroides Re... 65 6e-09 UniRef50_B3PDH3 Transcriptional regulator, AraC family n=2 Tax=G... 65 6e-09 UniRef50_B7RVF1 Transcriptional regulator, AraC family n=1 Tax=m... 65 6e-09 UniRef50_B8I0K9 Two component transcriptional regulator, AraC fa... 64 6e-09 UniRef50_C5ETL2 Two component transcriptional regulator n=1 Tax=... 64 7e-09 UniRef50_B5YFJ6 Transcriptional regulator, putative n=2 Tax=Dict... 64 7e-09 UniRef50_C0ZDD0 Probable transcriptional regulator n=1 Tax=Brevi... 64 7e-09 UniRef50_C6IY41 Predicted protein n=1 Tax=Paenibacillus sp. oral... 64 7e-09 UniRef50_P43461 Uncharacterized HTH-type transcriptional regulat... 64 7e-09 UniRef50_C5EPJ4 Predicted protein n=2 Tax=Clostridiales RepID=C5... 64 8e-09 UniRef50_UPI0001C373B4 transcriptional regulator, AraC family pr... 64 8e-09 UniRef50_A7LYG4 Sensor protein n=7 Tax=Bacteroides RepID=A7LYG4_... 64 8e-09 UniRef50_UPI0001C36F4C ggdef domain n=1 Tax=Ruminococcus flavefa... 64 8e-09 UniRef50_B3EYL7 Two-component response regulator n=5 Tax=Firmicu... 64 8e-09 UniRef50_C5EPK7 Two-component response regulator n=1 Tax=Clostri... 64 8e-09 UniRef50_A9U7E9 Predicted protein n=1 Tax=Physcomitrella patens ... 64 8e-09 UniRef50_C6LF57 Transcriptional regulator, AraC family n=1 Tax=B... 64 8e-09 UniRef50_C6LLK3 Putative two-component response regulator n=1 Ta... 64 9e-09 UniRef50_A7B1D9 Putative uncharacterized protein n=1 Tax=Ruminoc... 64 9e-09 UniRef50_C6J569 Transcriptional regulator n=1 Tax=Paenibacillus ... 64 9e-09 UniRef50_B0NX83 Putative uncharacterized protein n=1 Tax=Clostri... 64 9e-09 UniRef50_A7LV24 Sensor protein n=2 Tax=Bacteroides RepID=A7LV24_... 64 9e-09 UniRef50_C6CTB8 Two component transcriptional regulator, AraC fa... 64 1e-08 UniRef50_Q15WQ5 Transcriptional regulator, AraC family n=3 Tax=A... 64 1e-08 UniRef50_C6IZ62 Transcriptional regulator n=1 Tax=Paenibacillus ... 64 1e-08 UniRef50_C0CYV6 Putative uncharacterized protein n=2 Tax=Clostri... 64 1e-08 UniRef50_C9KYS9 Transcriptional regulator n=7 Tax=Bacteroides Re... 64 1e-08 UniRef50_C4L0K1 Transcriptional regulator, AraC family n=1 Tax=E... 64 1e-08 UniRef50_UPI0001788A1B transcriptional regulator, LacI family n=... 64 1e-08 UniRef50_C6IY72 Response regulator n=1 Tax=Paenibacillus sp. ora... 64 1e-08 UniRef50_A8RYQ3 Putative uncharacterized protein n=5 Tax=Clostri... 64 1e-08 UniRef50_UPI0001788A43 two component transcriptional regulator, ... 64 1e-08 UniRef50_B4D591 Transcriptional regulator, AraC family n=1 Tax=C... 64 1e-08 UniRef50_UPI0001C359BB two component transcriptional regulator, ... 63 1e-08 UniRef50_B7GJA8 Transcriptional regulator containing HTH domain,... 63 1e-08 UniRef50_C1TM41 Response regulator containing CheY-like receiver... 63 1e-08 UniRef50_A8S4U5 Putative uncharacterized protein n=1 Tax=Clostri... 63 1e-08 UniRef50_C5BA25 DNA-binding transcriptional dual regulator n=2 T... 63 2e-08 UniRef50_Q639B6 Methylphosphotriester-DNA alkyltransferase n=26 ... 63 2e-08 UniRef50_B8CY86 Regulatory protein GntR HTH n=1 Tax=Halothermoth... 63 2e-08 UniRef50_B8I8I4 Transcriptional regulator, AraC family n=2 Tax=C... 63 2e-08 UniRef50_A7VBS4 Putative uncharacterized protein n=1 Tax=Clostri... 63 2e-08 UniRef50_B2VHH7 Putative transcriptional regulator n=1 Tax=Erwin... 63 2e-08 UniRef50_A7VQN5 Putative uncharacterized protein n=2 Tax=Clostri... 63 2e-08 UniRef50_C0ADX5 AraC-type DNA-binding domain-containing protein-... 63 2e-08 UniRef50_A6UIP9 Helix-turn-helix-domain containing protein AraC ... 63 2e-08 UniRef50_UPI000196B709 hypothetical protein CATMIT_00139 n=1 Tax... 63 2e-08 UniRef50_Q03HU6 AraC-type DNA-binding transcriptional regulator ... 63 2e-08 UniRef50_Q5L870 Sensor protein n=4 Tax=Bacteroides RepID=Q5L870_... 63 2e-08 UniRef50_A8FAK6 AraC family transcriptional regulator n=2 Tax=Ba... 63 2e-08 UniRef50_A4WEG5 Transcriptional regulator, AraC family n=5 Tax=E... 63 2e-08 UniRef50_A6M1I8 Transcriptional regulator, AraC family n=1 Tax=C... 63 2e-08 UniRef50_UPI0001787E1A transcriptional regulator, AraC family n=... 63 2e-08 UniRef50_A6BDG3 Putative uncharacterized protein n=1 Tax=Dorea l... 63 2e-08 UniRef50_B0PG61 Putative uncharacterized protein n=1 Tax=Anaerot... 63 2e-08 UniRef50_Q5WIZ4 Putative uncharacterized protein n=1 Tax=Bacillu... 63 2e-08 UniRef50_B9Y8E0 Putative uncharacterized protein n=1 Tax=Holdema... 63 2e-08 UniRef50_Q4L316 Similar to transcriptional regulator n=2 Tax=Sta... 63 2e-08 UniRef50_C7Q086 Transcriptional regulator, LacI family n=1 Tax=C... 63 2e-08 UniRef50_UPI0001789626 transcriptional regulator, AraC family n=... 63 2e-08 UniRef50_C5RJF8 Transcriptional regulator, AraC family n=1 Tax=C... 63 2e-08 UniRef50_UPI0001C363C9 transcriptional regulator n=1 Tax=Clostri... 63 2e-08 >UniRef50_P0ACI5 Xylose operon regulatory protein n=151 Tax=Gammaproteobacteria RepID=XYLR_ECO57 Length = 392 Score = 815 bits (2106), Expect = 0.0, Method: Compositional matrix adjust. Identities = 392/392 (100%), Positives = 392/392 (100%) Query: 1 MFTKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARIDKIKDWLGDGV 60 MFTKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARIDKIKDWLGDGV Sbjct: 1 MFTKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARIDKIKDWLGDGV 60 Query: 61 IADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVN 120 IADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVN Sbjct: 61 IADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVN 120 Query: 121 RFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQT 180 RFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQT Sbjct: 121 RFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQT 180 Query: 181 LPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGAR 240 LPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGAR Sbjct: 181 LPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGAR 240 Query: 241 QMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACK 300 QMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACK Sbjct: 241 QMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACK 300 Query: 301 GIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMC 360 GIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMC Sbjct: 301 GIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMC 360 Query: 361 GYPSLQYFYSVFKKAYDTTPKEYRDVNSEVML 392 GYPSLQYFYSVFKKAYDTTPKEYRDVNSEVML Sbjct: 361 GYPSLQYFYSVFKKAYDTTPKEYRDVNSEVML 392 >UniRef50_B3H2Y3 Xylose operon regulatory protein n=7 Tax=Gammaproteobacteria RepID=B3H2Y3_ACTP7 Length = 405 Score = 478 bits (1229), Expect = e-133, Method: Compositional matrix adjust. Identities = 219/392 (55%), Positives = 300/392 (76%) Query: 1 MFTKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARIDKIKDWLGDGV 60 M K RI L FNANK YDRQV+EG+G+Y+QASQ W+IF+++DF R ++ L DG+ Sbjct: 13 MEKKSFRIALCFNANKVYDRQVIEGIGQYIQASQCIWNIFMQDDFTYRKQDLEGLLIDGI 72 Query: 61 IADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVN 120 IADFDD + L+D+++P++ VGGSY + YP + Y+ATDNYALVE+A LHLK+KG+N Sbjct: 73 IADFDDPETAALLSDMNIPVIAVGGSYQNPDYYPHIPYVATDNYALVETALLHLKQKGIN 132 Query: 121 RFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQT 180 RFAFYG+P K W+ ER+ AF L+ + +++ +Y G + +NW AQ+ L++WL + Sbjct: 133 RFAFYGIPSDEQKHWSVERKNAFIDLMEKYEHQTNIYLGHQVNAQNWLEAQSALSEWLAS 192 Query: 181 LPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGAR 240 LP QTGIIAVTDARARH+LQ CE+L+I VPE++ VIGIDNEEL ++LSRV+LSSV QG + Sbjct: 193 LPAQTGIIAVTDARARHLLQACEYLNIAVPEQISVIGIDNEELIQHLSRVSLSSVMQGTK 252 Query: 241 QMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACK 300 Q+GYQAAK+LH L + +++ +L+PP+RV +RRSTD+++ DP VIQAMHYI ++ACK Sbjct: 253 QIGYQAAKMLHHLFEGKKLSHSPVLIPPLRVEQRRSTDFQAFQDPFVIQAMHYIHHNACK 312 Query: 301 GIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMC 360 GIK +QVLD + ISRSNLE+RFK E+ +TIH +IH EKL +A+ +L T +SI EIS++C Sbjct: 313 GIKTEQVLDHLRISRSNLEQRFKHELNKTIHQVIHEEKLNRAKYMLQFTDISIQEISEIC 372 Query: 361 GYPSLQYFYSVFKKAYDTTPKEYRDVNSEVML 392 GYPSL YFYSVFKK Y TPK +R + ++++ Sbjct: 373 GYPSLPYFYSVFKKEYADTPKAFRQSHHKILV 404 >UniRef50_P45043 Xylose operon regulatory protein n=26 Tax=Gammaproteobacteria RepID=XYLR_HAEIN Length = 387 Score = 464 bits (1194), Expect = e-129, Method: Compositional matrix adjust. Identities = 220/384 (57%), Positives = 287/384 (74%) Query: 1 MFTKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARIDKIKDWLGDGV 60 M + ++I LLFNANK YDRQVVEG+G+Y+QASQ WDIF+E++F D I DG+ Sbjct: 1 MTEQYYKIALLFNANKVYDRQVVEGIGQYIQASQCMWDIFVEDEFIYHTDTINQLSIDGI 60 Query: 61 IADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVN 120 IADFDD + + L +P + VGGSY A+ YP YIATDN ALVE A HL+EKG++ Sbjct: 61 IADFDDPKTVELLQHTLIPTIAVGGSYKQADFYPHFPYIATDNMALVEMALSHLQEKGLS 120 Query: 121 RFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQT 180 +FAFYGL ++ K W+ ER AF +L+ + Y +Y+G++ +NW Q +L WL++ Sbjct: 121 QFAFYGLQVNTHKHWSIERRDAFVELMEKNHYPIYLYEGVQVHAQNWLEEQQKLIVWLKS 180 Query: 181 LPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGAR 240 LP TGIIAVTDARARH+LQ CE+ I VPE+LCV+GIDNEEL +YLSR++LSSV QG R Sbjct: 181 LPSHTGIIAVTDARARHLLQACEYSKIAVPEELCVVGIDNEELIQYLSRMSLSSVEQGTR 240 Query: 241 QMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACK 300 ++GYQAAKLLH+LL+ +++ IL+PP+ V R STDYRSLTDP VIQAMHYIR+ AC Sbjct: 241 EIGYQAAKLLHKLLNGQKVSHTPILIPPITVHSRNSTDYRSLTDPLVIQAMHYIRHRACH 300 Query: 301 GIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMC 360 IKV QVLD + SRSNLE+RFK E+ +TIH +IH EK+ +A++LL T +SI EI+++C Sbjct: 301 RIKVGQVLDHLETSRSNLEQRFKNEMNKTIHQVIHEEKISRAKNLLQQTDISIKEITEIC 360 Query: 361 GYPSLQYFYSVFKKAYDTTPKEYR 384 GYPS+QYFYSVFKK ++ TPKE+R Sbjct: 361 GYPSIQYFYSVFKKEFEMTPKEFR 384 >UniRef50_B2JFF0 Transcriptional regulator, AraC family n=39 Tax=cellular organisms RepID=B2JFF0_BURP8 Length = 414 Score = 398 bits (1023), Expect = e-109, Method: Compositional matrix adjust. Identities = 195/383 (50%), Positives = 261/383 (68%), Gaps = 1/383 (0%) Query: 4 KRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARIDKIKDWLGDGVIAD 63 + HRI LLFNANK YDR+++ G+G YL +++ WD+F+EEDFRAR++ I+ + GDG IAD Sbjct: 9 RTHRIALLFNANKVYDREIITGIGNYLLSTRVAWDLFLEEDFRARLNGIEHFEGDGFIAD 68 Query: 64 FDDKQIEQALADVDVPIVGVGGSYHLAESYPP-VHYIATDNYALVESAFLHLKEKGVNRF 122 FDD + +AL+D +P+V VGGSY A +YPP + YIATDN LV A+ HL G+ RF Sbjct: 69 FDDPAVCEALSDSLLPVVAVGGSYEDAAAYPPNLPYIATDNMQLVSLAYKHLIGAGLQRF 128 Query: 123 AFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQTLP 182 A Y LPES RWA ERE AF L+ + G V++GL T+ W A +L +WLQ+LP Sbjct: 129 ALYSLPESPTNRWAQERERAFNALLKADGLEGDVHRGLPTSAPVWHQASVQLTEWLQSLP 188 Query: 183 PQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQM 242 GIIAVTDARAR +LQ C IPVPE++ +IGIDN+ LTR L+R+ LSSV QG +M Sbjct: 189 KPVGIIAVTDARARQLLQACLISGIPVPEQVAIIGIDNDPLTRSLTRIPLSSVIQGTEEM 248 Query: 243 GYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGI 302 G AA LLH++L +RILVPPV + ST + L P V++A HYIR +AC+GI Sbjct: 249 GRTAAHLLHQMLGGARFAGRRILVPPVGINVCESTKHEPLASPYVMRARHYIRQYACQGI 308 Query: 303 KVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGY 362 K +QV D VG+SRS+LE F+ E+G T+H I KL+ A+ LL +S E++ CG+ Sbjct: 309 KTEQVADYVGVSRSSLEDYFRRELGCTVHQEILKHKLDVAKQLLAQQDMSSAEVAIRCGF 368 Query: 363 PSLQYFYSVFKKAYDTTPKEYRD 385 SLQY Y+VF++ D TP+EY++ Sbjct: 369 TSLQYMYAVFRRELDCTPREYQE 391 >UniRef50_A4A1D2 Xylose operon regulatory protein n=3 Tax=Planctomycetaceae RepID=A4A1D2_9PLAN Length = 390 Score = 228 bits (581), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 129/390 (33%), Positives = 211/390 (54%), Gaps = 16/390 (4%) Query: 4 KRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARIDKIKDWL----GDG 59 +R R+ L+ + Y R+V+ G+ Y+ A++ W I++ D R + + WL GDG Sbjct: 2 QRRRVMLIVETSLVYGREVLRGINRYVVANEP-WSIYV--DLRELVVRPPAWLEKWEGDG 58 Query: 60 VIADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGV 119 +I + + L + +P V + Y ++ P I T++ A+ + HL E+G Sbjct: 59 IITRSTTPSLAEKLRALKIPTVDLTDIYG-SQGLP---QIGTNHEAVGKMGAQHLLERGF 114 Query: 120 NRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGL--ETAPENWQHAQNRLADW 177 FAF G +G W++ R+ F+ +V + + YQ T W Q+++ W Sbjct: 115 RHFAFCGF---TGHNWSSRRQEGFKTVVTKAGFDFHQYQSPWDTTTALTWDEQQSQIVRW 171 Query: 178 LQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQ 237 L++LP GI+A D R +H+L C + + VPE++ VIG+DN+EL L LSS+ Sbjct: 172 LESLPRPAGIMACNDMRGQHVLDACRRIGVAVPEEIAVIGVDNDELVCDLCDPPLSSIMP 231 Query: 238 GARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNH 297 +++GY+AA +L L+ E+ L+ P+ V+ R+STD ++ DP V A+ YIR H Sbjct: 232 NPQRIGYEAASMLDALMRGEKPKQMNKLIEPIGVVTRQSTDVLAIDDPLVASAVKYIRQH 291 Query: 298 ACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEIS 357 AC GI V++VL V +SRS LE+RF++ +G + + I A +L++ R LL T L + I+ Sbjct: 292 ACDGISVEEVLKQVPVSRSILERRFRKYIGRSPQSEIRAVQLKRVRQLLRETDLPLERIA 351 Query: 358 QMCGYPSLQYFYSVFKKAYDTTPKEYRDVN 387 + GY +Y VFK+ TP +YR N Sbjct: 352 TLAGYDHPEYMSVVFKRELGQTPGQYRTQN 381 >UniRef50_A6C615 Xylose operon regulatory protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C615_9PLAN Length = 384 Score = 218 bits (555), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 121/382 (31%), Positives = 211/382 (55%), Gaps = 12/382 (3%) Query: 7 RITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEE--DFRARIDKIKDWLGDGVIADF 64 ++ + +K + R++++G+ Y + + W I+I+E + IK W GDG+IA Sbjct: 8 QVAIFIETSKTFGREILQGISTYSR-THGPWSIYIDEWGPQTPLPEWIKTWQGDGIIARV 66 Query: 65 DDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRFAF 124 +Q+ + LA + VP+V + E P + D+ + + AF HL ++ + +FAF Sbjct: 67 RSRQMAERLARLRVPVVDT--LQQVPELEMPAVF--ADDTLIAKLAFEHLHDRHLRQFAF 122 Query: 125 YGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETA--PENWQHAQNRLADWLQTLP 182 G+ +++ W+ R AF ++ E+ + +Y L E+W Q+ LADWL+ LP Sbjct: 123 VGVEKAN---WSHRRRDAFAEIACEQGFTCEIYSPLSRRRFAESWNGGQDDLADWLEALP 179 Query: 183 PQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQM 242 G+ A D RA +L C I +PE++ V+G+DN+++ + L+S+A A+++ Sbjct: 180 KPIGLFAAHDLRALCVLDACRRRDIAIPEQVAVVGVDNDDVFCEVVDPTLTSIALQAKEI 239 Query: 243 GYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGI 302 GYQ+A LL +L+ + VPP +I RRST+ ++ DPA+ A+ IR AC+ I Sbjct: 240 GYQSAALLDQLMRGNPPAQYPLPVPPRILIPRRSTNMIAVEDPAIASALELIRRKACEKI 299 Query: 303 KVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGY 362 V + V ++R +LE+R + VG+T H +I E++ +AR LLI T ++ +I+QM G+ Sbjct: 300 SVSMIASQVNLTRRSLERRLMKLVGKTPHQLISEERVRRARQLLIDTDFTLEQIAQMAGF 359 Query: 363 PSLQYFYSVFKKAYDTTPKEYR 384 S Y + K+ + TP E+R Sbjct: 360 SSAAYLSVIIKEHENCTPTEFR 381 >UniRef50_A3ZY76 Xylose operon regulatory protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZY76_9PLAN Length = 387 Score = 213 bits (543), Expect = 8e-54, Method: Compositional matrix adjust. Identities = 126/389 (32%), Positives = 195/389 (50%), Gaps = 14/389 (3%) Query: 7 RITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARIDKIKDWL----GDGVIA 62 R+ LL ++ Y R ++ G+ + Q W I+ + R + + WL GDG++A Sbjct: 6 RVALLIETSREYGRGLLRGISRF-QREHGPWSIYFQP--RGANEPVPTWLANWNGDGILA 62 Query: 63 DFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRF 122 +D+++ QA+ VP V + A + + DN ALV A H ++G RF Sbjct: 63 RVEDRRMAQAIQKTGVPAVDL----RFAVPNLKMPGVGVDNLALVSLALDHFLDRGFTRF 118 Query: 123 AFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVY-QGLETA-PENWQHAQNRLADWLQT 180 AF G P W R F LV ++ YR V+ Q L+ A P W+ Q +L W++ Sbjct: 119 AFCGYPTGEFI-WMDLRAKLFHDLVVQKGYRCEVFPQDLKIAKPRTWEQDQRQLVRWIRK 177 Query: 181 LPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGAR 240 L I+A D+R + +L C VP L V+G+DN+E LS LSS+ Sbjct: 178 LEKPVAIMACNDSRGQQLLDACRRAEADVPNDLSVLGVDNDEFLCGLSTPPLSSIDINTE 237 Query: 241 QMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACK 300 ++GY AA+LL L++ P + +L P VI RRSTD ++ D + Y R +AC+ Sbjct: 238 RIGYYAAELLQSLMNGAPAPSEPVLFPAEAVIARRSTDSFAVEDEEFAAVLRYFRENACQ 297 Query: 301 GIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMC 360 GI++ + A G+ R LE+R K +G + + K+E++R LL+ T +SI I+Q Sbjct: 298 GIRMADITKATGMERRTLERRMKSTLGRSPKDELIRIKIEESRRLLVRTDMSIKNIAQAA 357 Query: 361 GYPSLQYFYSVFKKAYDTTPKEYRDVNSE 389 G+ + +YF VF+ TTP YR E Sbjct: 358 GFSNSRYFSRVFQSRVGTTPLAYRKSTHE 386 >UniRef50_Q7UYL2 Xylose operon regulatory protein n=4 Tax=Planctomycetaceae RepID=Q7UYL2_RHOBA Length = 391 Score = 211 bits (538), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 125/385 (32%), Positives = 206/385 (53%), Gaps = 12/385 (3%) Query: 4 KRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFR--ARIDKIKDWLGDGVI 61 K+ + LL + AY R ++ G+ Y+ W I++ E R A + DW GDG+I Sbjct: 9 KQKAVALLIETSNAYARGLLGGIASYIH-EHDLWSIYLVEQERGAAPPSWLNDWDGDGLI 67 Query: 62 ADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNR 121 A ++++I ++ ++ +P+V V A P + ++ T++ A+ E A+ H +E+G Sbjct: 68 ARIENEEIASSVRNLKIPVVDVSA----ARRIPNIPWVETNDVAIGELAYQHFRERGFEN 123 Query: 122 FAFYGLPESSGKRWATEREYAFRQLVAEEKYR--GVVYQGLETAPENWQHAQNRLADWLQ 179 FAF G S W+ R AF V E+ ++ + + P++ + ++RLA+W+ Sbjct: 124 FAFCG---ESRFNWSILRRQAFEARVKEDGFQCQSFNFNVDDRRPQSLKRERDRLAEWVL 180 Query: 180 TLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGA 239 +L G++A D A+ IL VC I VP +L ++G+DN+EL L LSSV A Sbjct: 181 SLQHPIGVLACYDIMAQKILDVCRLHGIKVPSELALLGVDNDELLCDLCTPPLSSVVPAA 240 Query: 240 RQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHAC 299 Q G +AA LL ++ EE+ + L+ P+ V R+STD ++ DP + A+ +IR+H C Sbjct: 241 HQTGREAASLLDAMMRGEEVHAEPHLIEPLGVATRQSTDVLAIKDPEIAAAVRFIRDHCC 300 Query: 300 KGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQM 359 GI V V+ V +SR E RF +G T H I ++E+ R LLI T L++ +IS+ Sbjct: 301 DGINVQDVVKKVPLSRRVFESRFLALMGRTPHQEITRRRIERVRYLLIETDLTLVQISRR 360 Query: 360 CGYPSLQYFYSVFKKAYDTTPKEYR 384 G+ + +Y F++A P YR Sbjct: 361 TGFQNHEYMSVAFRRAMGHPPATYR 385 >UniRef50_B4CYR5 Transcriptional regulator, AraC family n=2 Tax=Verrucomicrobia RepID=B4CYR5_9BACT Length = 406 Score = 207 bits (526), Expect = 6e-52, Method: Compositional matrix adjust. Identities = 129/391 (32%), Positives = 205/391 (52%), Gaps = 24/391 (6%) Query: 3 TKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARIDKIKDWL----GD 58 T+ ++ LL + AY R+++ GV EY++ W++ + E R D+ WL GD Sbjct: 11 TRPPKVALLVETSNAYARELLLGVKEYIRV-HGPWNVHLSEHSRG--DRPPSWLIDWDGD 67 Query: 59 GVIADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKG 118 GVIA ++KQI +AL + VP+V +LA + PV + TDN A+ AF H E+G Sbjct: 68 GVIARVENKQIARALEALRVPVVDFSSHRYLAGA--PV--VTTDNAAIARLAFDHFIERG 123 Query: 119 VNRFAFYGLPESSGKRWATEREYAFRQLVAE-----EKYRGVVYQGLETAPENWQHAQNR 173 FA+ G+ + W+ R F +LV E Y G ++ E + Sbjct: 124 FQHFAYCGVDRFA---WSVARGGHFDELVRRAGLICEHYADPAGFGPDSDAET-----DA 175 Query: 174 LADWLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALS 233 +A WL+ LP + A DAR + +L C+ + VP+++ V+G+DN+ L LS LS Sbjct: 176 IAQWLRGLPAPVAVFACYDARGQQLLDACQRAGLAVPDQIAVLGVDNDSLLCELSPPPLS 235 Query: 234 SVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHY 293 SV R+ G++AA LL RL+ + + +PP+ V R+STD ++ DP + + + Sbjct: 236 SVMLDTRRTGWEAADLLSRLMQGQRTKAEVHRIPPLGVFTRQSTDIHAVEDPKIARVLQI 295 Query: 294 IRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSI 353 IR AC G+ V ++L +SR LE+R KE +G H I ++ + + LL +T LS+ Sbjct: 296 IREQACAGLTVPELLRKCPMSRRVLEQRMKEVLGRAPHEEIVRVQIRRVQDLLRTTELSL 355 Query: 354 NEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 EI++ G+ + QY VFK+ P E+R Sbjct: 356 EEIAERSGFRNAQYLSVVFKREVGQPPSEFR 386 >UniRef50_A6C3C2 Xylose operon regulatory protein n=2 Tax=Planctomycetaceae RepID=A6C3C2_9PLAN Length = 405 Score = 202 bits (515), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 110/381 (28%), Positives = 211/381 (55%), Gaps = 12/381 (3%) Query: 8 ITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFI-EEDFRARIDK-IKDWLGDGVIADFD 65 + LL ++++ R ++ G+ +++ A + EW +F+ +++ + I W GDG++ Sbjct: 29 VALLIETSRSHGRGLLNGIRQFI-AEKEEWSVFLMPRSLDSQVPEWISRWKGDGILCRTT 87 Query: 66 DKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRFAFY 125 +++ A+ +P + + S L S+P ++ DN A+ H E+G+ F Y Sbjct: 88 SQEMADAITKSGIPALELR-STKLKHSFP---FLGIDNRAMGRMVAEHFLERGIRHFGVY 143 Query: 126 GLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETA--PENWQHAQNRLADWLQTLPP 183 E + + +R + Q + Y V+ + + P W+ Q ++ W+ LP Sbjct: 144 ---EIGCEVYFEQRCENYIQTINNAGYEVSVFSSPDDSEVPREWEKHQEKMVKWVSGLPK 200 Query: 184 QTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMG 243 G++A TD +L C+ I VP+++ V+G +N+++ ++R LSSVA + ++G Sbjct: 201 PAGVMACTDLLGFWLLDACDRAGISVPDEVAVVGAENDDILCMMARPPLSSVAYNSTRIG 260 Query: 244 YQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIK 303 Y+AA LL R++ +P + L+ P+ ++ R+S+D ++ DP + A+ +IR +ACKGI+ Sbjct: 261 YEAAALLSRIMKGGSVPEEPYLLKPLGIVTRQSSDVVAVDDPELALALRFIRENACKGIQ 320 Query: 304 VDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYP 363 V +L AV +SR+ LE++ K +G + A I ++E+A+ LL ST LS+++I+Q G+ Sbjct: 321 VTDILKAVPMSRTALERQMKSAIGRSPKAEIIRTQIERAKELLASTDLSLSQITQRIGFR 380 Query: 364 SLQYFYSVFKKAYDTTPKEYR 384 Q+F ++FK+ TP E+R Sbjct: 381 HTQHFSTLFKEKVGETPGEFR 401 >UniRef50_A6C655 Xylose operon regulatory protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C655_9PLAN Length = 381 Score = 202 bits (513), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 121/381 (31%), Positives = 199/381 (52%), Gaps = 12/381 (3%) Query: 12 FNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARIDK--IKDWLGDGVIADFDDKQI 69 ++ Y R ++ GV +Y+Q ++ W I ++ I W GDG+IA D + Sbjct: 1 METSRGYGRGILHGVWQYIQEHET-WSILYRPCGFGQVAPSWISSWDGDGIIAFIDTAKT 59 Query: 70 EQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRFAFYGLPE 129 + L VP V + G P V ++A DN + E A + ++G FA G Sbjct: 60 ARLLKQSGVPTVDLLGELI---PKPQVPFVAPDNQQVAELAVQYFLDRGYQSFAACGF-R 115 Query: 130 SSGKRWATEREYAFRQLVAEEKYRGVVYQ---GLETAPENWQHAQNRLADWLQTLPPQTG 186 + + +R F+Q + E ++ G + P +W+ Q ++A WLQ LP Sbjct: 116 TGLRPMLDQRCLKFQQQIQETGAECALFTPRGGGKEGP-SWEREQEQIARWLQGLPKPLA 174 Query: 187 IIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQA 246 + D R R +L C+ +I VPE++ V+G+ N+++ LS LSS+ +++GYQA Sbjct: 175 LFTCNDTRGREVLNACQTHNISVPEEVAVLGVGNDDILCQLSDERLSSIDVDPQRVGYQA 234 Query: 247 AKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQ 306 A +L L+ ++ +P +PP RV+ R STD ++TDP + A+ YIR +AC+ I+V+ Sbjct: 235 AAVLDSLMHQKPVP-DLTFIPPRRVVSRHSTDSLAVTDPELATAIQYIRRYACRQIQVED 293 Query: 307 VLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQ 366 V+ V + R LE+RF++ +G + A I +L +AR LL TTLS EI+ CG+ S Sbjct: 294 VVKQVNLERRVLERRFRKLLGRSPKAEIIRLQLVRARELLAETTLSNTEIAYRCGFNSAA 353 Query: 367 YFYSVFKKAYDTTPKEYRDVN 387 YF +F++ TP E+R + Sbjct: 354 YFMDLFRRKVGQTPGEFRQTS 374 >UniRef50_Q7UXA9 Xylose operon regulatory protein n=1 Tax=Rhodopirellula baltica RepID=Q7UXA9_RHOBA Length = 438 Score = 199 bits (507), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 138/404 (34%), Positives = 209/404 (51%), Gaps = 46/404 (11%) Query: 4 KRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARIDKI-KDWLG----D 58 R RI LL ++AY R+++ G+ Y + ++ +W + EE ID + DW+ D Sbjct: 38 NRPRIALLVEVSRAYGRELLRGIALYAR-TKGDWSLLHEE---MTIDSVVPDWISRTRVD 93 Query: 59 GVIADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKG 118 GVIA D I+ L + VPIV V G+ +P V + DN + E AF HL E+G Sbjct: 94 GVIARLDHHSID-PLRRLRVPIVDVRGN----RKFPGVPQVEADNEQVAEMAFEHLWERG 148 Query: 119 VNRFAFYGLPESSGKRWAT---EREYAFRQLVAEEKYR----------GVVYQGLETAPE 165 RFAF G R+AT R AFR+LV + G+ + LE A Sbjct: 149 FRRFAFCGF------RFATYSDARLIAFRKLVEKAGCPFTEHQSPGAPGITLRELERAGV 202 Query: 166 NWQHAQNRLADWLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTR 225 Q A L +WL TL TG+ D R + +L C +I VP+ + VIG+D+++ Sbjct: 203 VEQEA---LVEWLSTLERPTGLFVCNDIRGQQVLNACRFANIAVPDDVGVIGVDDDDTIC 259 Query: 226 YLSRVALSSVAQGARQMGYQAAKLLHRLL-----DKEEMPLQRILVPPVRVIERRSTDYR 280 + +LSSV A GY+AA++L ++L DKE ++RI PP+ V ER ST Sbjct: 260 SICDPSLSSVRPNAELAGYRAAEILQQMLNGWVPDKE---VERI--PPISVTERLSTKVV 314 Query: 281 SLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLE 340 ++ D + + +IR +AC GI V V++ +SR LE+RF++ +G T H I +LE Sbjct: 315 AVEDAELARVCRFIRQNACNGINVGDVVEFTSLSRRQLERRFRDVLGHTPHHQITMTQLE 374 Query: 341 KARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 + R LL T +++ +I+ + GY + +VFK+ +P EYR Sbjct: 375 RVRQLLTETDMTLEQIAPLAGYSHKESLGAVFKRETGQSPGEYR 418 >UniRef50_D2R7D2 Transcriptional regulator, AraC family n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R7D2_9PLAN Length = 390 Score = 193 bits (491), Expect = 8e-48, Method: Compositional matrix adjust. Identities = 122/387 (31%), Positives = 196/387 (50%), Gaps = 16/387 (4%) Query: 3 TKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEE-DFRARIDK-IKDWLGDGV 60 T R ++ L+ + Y R +++GV Y++ S EW +F+E+ + A + + I W GDG+ Sbjct: 9 TSRPQVALIIETSINYGRGLLKGVARYMR-SAGEWSVFLEQRELGAELPRWIDRWDGDGI 67 Query: 61 IADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVN 120 I DD + L + +P V + + P I DN A+ A HL E+G Sbjct: 68 ITRSDDPR----LLERGIPTVALFDHRSCQQKVP---QILNDNRAVGRLAAAHLVERGFR 120 Query: 121 RFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPEN---WQHAQNRLADW 177 AFYG+P G+ W+ ER R+ A + V++ + + WQ +Q LA W Sbjct: 121 HLAFYGVP---GEFWSEERLAGVREEGARQGASLAVFEPARSRRKRSIAWQDSQEELARW 177 Query: 178 LQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQ 237 + G++A D L C+ I VPE++ V+G DN+E LS LSS+A Sbjct: 178 MSAQAAPLGLVAANDIHGLRALDACKRAGISVPERVAVMGADNDEELCELSDPPLSSIAF 237 Query: 238 GARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNH 297 + G+ AA++L R++ E + LVPP+ ++ R+STD ++ D V +A+ IR Sbjct: 238 QPLRAGFAAAEMLARMMRGERVQSAMQLVPPLGLVTRQSTDVLAMEDEEVARALAVIRQQ 297 Query: 298 ACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEIS 357 AC G+ V +L V ISR +LE R ++ +G T I ++E+A+ LL T L ++ I+ Sbjct: 298 ACDGLDVPAILRQVPISRRSLEIRMQKLLGRTPREEIRRVQIERAKKLLSETDLKLDRIA 357 Query: 358 QMCGYPSLQYFYSVFKKAYDTTPKEYR 384 CG+ F++ TTP +YR Sbjct: 358 VSCGFVRASALSIAFREVVGTTPSDYR 384 >UniRef50_A4BCC5 PurR protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BCC5_9GAMM Length = 371 Score = 193 bits (490), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 121/383 (31%), Positives = 200/383 (52%), Gaps = 19/383 (4%) Query: 10 LLFNANKAYDRQVVEGVGEYLQASQSEWDI-FIEEDFRARIDKIKDWLGDGVIADFDDKQ 68 +LF+ + YDR++ +G+ + + S I F+ D + +DW D +IADFD Sbjct: 1 MLFDIKQPYDRKITDGILDAMHNSNRNLQITFMTYDEALLVAHDQDW--DAIIADFDRLP 58 Query: 69 IEQALADVDVPIVGVGGSYHLAESYP--PVHYIATDNYALVESAFLHLKEKGVNRFAFYG 126 A + P V V + PV ++A D+ + + A HL G +FA++ Sbjct: 59 NIDLCASLKAPTVAVFSNLQRMPELTDIPVIFLAPDSEKICQLARDHLLACGCRQFAYFA 118 Query: 127 LPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQT-LPPQT 185 WA ER F+Q V EE G+ + G T ++ +H +LQT L P T Sbjct: 119 GTADDIGLWARERRLCFKQAVLEE---GLNWAGAYTT-QSIRH-------FLQTDLAPGT 167 Query: 186 GIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQ 245 G + +D +AR ++ + ++L+I +P +LCVIGIDN+E+ LSR+ +S+V +G Sbjct: 168 GFLCASDTQARQLITLAQNLNISIPSQLCVIGIDNDEVENQLSRIPISTVTLAPSDLGKA 227 Query: 246 AAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVD 305 A + L L + P+ + L+ P V+ R S DP + A+ +I H + IK + Sbjct: 228 AFEALFEL-STQHQPVTK-LIQPGEVMNRLSAFLEVNDDPLLSTALKFIYKHYHRSIKAE 285 Query: 306 QVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSL 365 QV+ SR+ LE RFK + ++IH ++H +LE A+ +L +T I+E++ CG+ S Sbjct: 286 QVIAECKTSRNTLESRFKTVLEKSIHQVLHDVRLENAKDMLKNTRKGIDEVAIQCGFSSP 345 Query: 366 QYFYSVFKKAYDTTPKEYRDVNS 388 QY Y +F+K TP +YR++N+ Sbjct: 346 QYLYYIFRKELGMTPTKYRELNT 368 >UniRef50_A6CF05 Xylose operon regulatory protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CF05_9PLAN Length = 386 Score = 189 bits (480), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 119/389 (30%), Positives = 205/389 (52%), Gaps = 18/389 (4%) Query: 4 KRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARI--DKIKDWLG---- 57 ++ R+ +L + + + R ++ G+ + Q W + FR+ WL Sbjct: 3 EQSRVAILIDTSSGHGRGLLNGMIRF-QREIGSWSVI----FRSHQPDQPAPAWLQKADI 57 Query: 58 DGVIADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEK 117 DGV+A KQ+ L +P++ + + +P + TDN +VE A HL ++ Sbjct: 58 DGVLARIPHKQMADILRKRRLPVIDMPYTRE-GFGFPSLF---TDNQKIVELAAQHLLDR 113 Query: 118 GVNRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVY--QGLETAPENWQHAQNRLA 175 G+ F F G P R ER F Q +A+ ++ Q +W++ Q +A Sbjct: 114 GIRHFGFCGWPRGLNSR-MDERCDLFVQTLADAGCTCSLFPEQNDRWDASHWENDQQGIA 172 Query: 176 DWLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSV 235 +WL TLP G++A D R +H+L+ C+ + + VP+++ VIG DN++L LS L+S+ Sbjct: 173 EWLITLPKPAGVMACYDDRGQHVLEACQIVGLKVPDEVAVIGSDNDDLICKLSSPPLTSI 232 Query: 236 AQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIR 295 G ++GY+AA LL +++ + E P L PP R+++R+ST+ ++ D + A+ +IR Sbjct: 233 DAGFERIGYEAASLLEQMMKQGEQPEPVQLFPPARLVQRQSTNIVAVEDQDLAAALRFIR 292 Query: 296 NHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINE 355 +HA + I V+ +L V ISRS+LE+R K+ +G T I +LE+ + LL T LS+ E Sbjct: 293 DHASQRITVEDILAEVPISRSSLERRMKKFIGRTPKEEILRVQLERVQQLLAETQLSLTE 352 Query: 356 ISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 I+ G+ Y ++FK+ + TP +R Sbjct: 353 IAFKTGFDHPHYLAALFKRKFQQTPGSFR 381 >UniRef50_B5JFL8 Transcriptional regulator, AraC family protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JFL8_9BACT Length = 385 Score = 188 bits (477), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 107/383 (27%), Positives = 200/383 (52%), Gaps = 13/383 (3%) Query: 7 RITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARID--KIKDWLGDGVIADF 64 RI +L + RQ+V G+ + + +++W IF + I++W GDG+IA Sbjct: 5 RIAILVETSLDSGRQIVRGISRFAR-ERNDWSIFYHTGPLGAMAPASIENWEGDGIIARI 63 Query: 65 DDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRFAF 124 + ++ + P V V G+ A+ YP + D+ A+ HLK++G AF Sbjct: 64 ANPKLHSLVKTRQTPAVDVLGNVPEAD-YP---IVKCDDRAISALVGNHLKDRGFRHIAF 119 Query: 125 YGLPESSGKRWATEREYAFRQLVAEE---KYRGVVYQGLETAPENWQHAQNRLADWLQTL 181 +GL + + W+ R+ ++ E K + +E ++W R+ W++ L Sbjct: 120 FGL---NNEIWSVNRKIELQRFCDRELGSKLDTLEVDHIERDSQSWPDYTARIRTWIEAL 176 Query: 182 PPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQ 241 P GI+ +D +L C+ + VP+++ ++G+DN+ + + LSSV Sbjct: 177 PKPVGIMVASDQFGPDLLGACQASGLSVPDQVALVGVDNDLPFCEICQPQLSSVEPNHEL 236 Query: 242 MGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKG 301 +GY+AA++L +L+ P + +PP + R+S+D +L DP++++A+ YIR HAC Sbjct: 237 VGYEAARILDTILETGSAPQSIVEIPPRLLHVRQSSDATALEDPSLVKALRYIRAHACDP 296 Query: 302 IKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCG 361 + VD + G+SRS L++RF+ + +T+ I A ++ +A+ +L +T L++ ++++ CG Sbjct: 297 VSVDDIAREAGVSRSVLQRRFRNSLNQTVLEAILAVRINRAKEMLATTRLALPDVAERCG 356 Query: 362 YPSLQYFYSVFKKAYDTTPKEYR 384 + +Y VFKK TP +YR Sbjct: 357 FRHQEYLGYVFKKRIGCTPGQYR 379 >UniRef50_C5BYV3 Transcriptional regulator, AraC family n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5BYV3_BEUC1 Length = 401 Score = 186 bits (471), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 115/382 (30%), Positives = 202/382 (52%), Gaps = 13/382 (3%) Query: 5 RHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARID--KIKDWLGDGVIA 62 RH + LL + AY R ++ GV +Y+ A + W +++ E R D ++ W GDGV+A Sbjct: 7 RH-VALLVETSNAYARGLLAGVRKYV-AGDAGWSLYLAEHSRHETDFSWLEGWEGDGVLA 64 Query: 63 DFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRF 122 ++ + + + +D+P V + LA P TD+ A+ A H E+G+ F Sbjct: 65 RIENVETARFIRRLDLPTVDLSAG-RLAAELPGAE---TDDRAIARLAVEHFTERGLRHF 120 Query: 123 AFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQTLP 182 AF G + W+ +R + V E +R + + + RLA+WL+ LP Sbjct: 121 AFCGDERFA---WSIKRSTWYSHYVRELGHRPQTFAMKSSGMRAVD--RERLAEWLRGLP 175 Query: 183 PQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQM 242 G++A D + +L+ C+ ++ VP+ + V+G+DN+EL L+ ALSS+ + Sbjct: 176 KPVGVLACYDIAGQEVLEGCKIANLAVPDAVAVLGVDNDELVGTLTSPALSSIEPDTTRT 235 Query: 243 GYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGI 302 GY AA++L ++ E+ L+ P+RV+ R+S+D S++DP V +A+ YIR+ + + + Sbjct: 236 GYLAAEMLDLMMGGRELDPGLRLIEPLRVVARQSSDIFSVSDPLVAEALRYIRDRSDQNL 295 Query: 303 KVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGY 362 V++VL VG+SR +L+ RF + +G T+H I ++ LL ST ++ +I++ + Sbjct: 296 AVEEVLRHVGLSRRSLDHRFAQTLGRTVHGEIVRVRMGHVAELLSSTDWTLPQIAERLEF 355 Query: 363 PSLQYFYSVFKKAYDTTPKEYR 384 +Y FKK +P YR Sbjct: 356 SHSEYMGVAFKKYTGKSPGRYR 377 >UniRef50_C1ZL78 Transcriptional regulator n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZL78_PLALI Length = 380 Score = 181 bits (458), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 107/380 (28%), Positives = 189/380 (49%), Gaps = 13/380 (3%) Query: 8 ITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFI---EEDFRARIDKIKDWLGDGVIADF 64 + +L ++ R VVE V Y Q +S W + I +ED R R+ W GDG +A Sbjct: 8 VAVLIETGDSWGRNVVEAVARYAQ--KSRWALVISPRDEDGRLRLPH--RWQGDGAVAML 63 Query: 65 DDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRFAF 124 D + ++L +P+V V E++ V + TD+ + AF H + K FA Sbjct: 64 RDVPMARSLQTAAIPVVDVD-VLMRQETW--VGRVVTDDRVRIAMAFEHFRSKNFTHFAC 120 Query: 125 YGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQTLPPQ 184 + R+ +R F+Q+ + + + LE W +A W+++ P Sbjct: 121 FA---PHVNRYPDQRSQLFQQVARKAGFYCCGFDKLERNELGWYADPQLVAQWIRSQPSP 177 Query: 185 TGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGY 244 + A AR + ++C+ I +P+++ ++ D ++L ++ +SSV ++G+ Sbjct: 178 LAVFAPDPVPARQLAEICQWEGIHIPDEVAILSGDTDDLLCSIASPPISSVELDCARIGH 237 Query: 245 QAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKV 304 +A LLHR+++ P L+PP+RVI R ST+ ++ D + + +IR+HAC+GI+V Sbjct: 238 EACALLHRMMNGRPAPKHPKLIPPLRVIARHSTEILAVADQEIGDVLRFIRSHACEGIRV 297 Query: 305 DQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPS 364 +L ISR LE++F+ +G T I +LE+AR+LL+ + L I+ ++ CG+ S Sbjct: 298 PDILKVYPISRRTLEQKFQTILGRTPSEEIRRTRLEQARNLLVDSDLPISSVATKCGFSS 357 Query: 365 LQYFYSVFKKAYDTTPKEYR 384 F F+K P + R Sbjct: 358 SVEFSHAFRKYLGIKPSDLR 377 >UniRef50_A6CCU7 Xylose operon regulatory protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CCU7_9PLAN Length = 395 Score = 179 bits (453), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 113/383 (29%), Positives = 189/383 (49%), Gaps = 8/383 (2%) Query: 5 RHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIE-EDFRARIDKIKDWLGDGVIAD 63 R R+ LL + + RQV+EGV EY AS WD IE F ++ W GDGVI Sbjct: 5 RWRVALLVQTSSEWSRQVLEGVAEY-AASNGGWDFRIEPRGFYEKLRLPLTWEGDGVICR 63 Query: 64 FDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRFA 123 D ++ + L ++P V V + P V +D A A + + G F Sbjct: 64 LTDPELIEELHSRNIPAVNVSWKGLNSNDIPNV---ISDEAACGRLAADYFIQNGWTNFG 120 Query: 124 FYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQ-GLETAPENWQHAQNRLADWLQTLP 182 F G P + T++ Y+ QL+A Y ++ L +++ + + WL +LP Sbjct: 121 FVGPPPNQKYTDVTQKSYS--QLLAAGGYHTYQFEHSLGYGKLSFEDQRPEMEKWLLSLP 178 Query: 183 PQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQM 242 + T + I+ C HL + VP + ++ ++ + L LS V ++ + Q ++ Sbjct: 179 KPIALFVWTTTMGQEIMLFCRHLGLSVPNDVAILAVELDPLISSLSPVPIAYIDQSPHRV 238 Query: 243 GYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGI 302 G +AAKLL +++ E P + +L+PP ++ R+S D D V A+ +IR + Sbjct: 239 GMEAAKLLQKMIQGEPAPEKSVLIPPSGIVARQSVDTLLGEDEHVRNAIEFIRKKIALPM 298 Query: 303 KVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGY 362 +V+ V +AV +SR +LE RF++ +G++ MI KL +A +LL+ T L+I EI++ G+ Sbjct: 299 QVEDVANAVSLSRRSLENRFQKTLGKSPAQMIRESKLSRAMNLLMETNLTIQEIAERTGF 358 Query: 363 PSLQYFYSVFKKAYDTTPKEYRD 385 ++ F FK+ P YRD Sbjct: 359 FHVETFARFFKRETGKPPSLYRD 381 >UniRef50_UPI000174642C xylose operon regulatory protein n=3 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI000174642C Length = 417 Score = 178 bits (451), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 116/383 (30%), Positives = 191/383 (49%), Gaps = 13/383 (3%) Query: 6 HRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFI--EEDFRARIDKIKDWLGDGVIAD 63 ++ +L + +Y R ++ G+G Y + S+ W ++I F ++ W G G+IA Sbjct: 12 QQVAVLIDDAGSYSRDLLIGIGRYQRESKKPWALYIIHRRRFEMPPPSLRSWRGQGIIAR 71 Query: 64 FDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRFA 123 D +++E L + +P+V + G+ L E + P ++ D A ++G A Sbjct: 72 VDTQEVEAELKSLSLPVVNISGA--LKEPFFPT--LSQDPLLAAHLALKCFDDRGFRHHA 127 Query: 124 FYGLPESSGKRWATEREYAFRQLVAEEKYR-GVVYQGLETAPENWQHAQNRLADWLQTLP 182 F G S ++W+ ER FR+L+ R G + L A +A WL++ P Sbjct: 128 FVG---DSLQQWSLERWEEFRRLLGARGERCGNLL--LNPGESGAGRAVQIIAKWLESQP 182 Query: 183 PQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQM 242 GI A D +L C +I VPE + V+G+DN+ L+ LSS+ Sbjct: 183 RPLGIWAGDDGMGLQVLNACLVSNIRVPEDVAVLGVDNDASIAELASPPLSSIILNGEGA 242 Query: 243 GYQAAKLLHRLLDKEEMPLQRIL-VPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKG 301 GY+AA+LL R + E +I + P V RRSTD ++ DP V +A+ I+ AC G Sbjct: 243 GYRAAQLLDRWMGGEPAVTGKIYQLAPAGVAWRRSTDVFAVEDPYVAKALRMIQQEACAG 302 Query: 302 IKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCG 361 ++V +V+ V ++R LE RFK V T+ A I + +A+ LL +T + + ++++ CG Sbjct: 303 LRVAEVVGRVPLARRQLEMRFKAAVRRTLLAEIWRVQCRRAQELLETTDIPMVDVAEQCG 362 Query: 362 YPSLQYFYSVFKKAYDTTPKEYR 384 Y L++F VFKK P E+R Sbjct: 363 YEHLEHFSKVFKKVVGHPPGEHR 385 >UniRef50_Q7UHK5 Xylose operon regulatory protein n=2 Tax=Planctomycetaceae RepID=Q7UHK5_RHOBA Length = 416 Score = 177 bits (450), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 111/387 (28%), Positives = 192/387 (49%), Gaps = 10/387 (2%) Query: 3 TKRHR-ITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIE-EDFRARIDKIKDWLGDGV 60 T R R + +L + ++ R VVE + + S+W + I D + R+ K W GDG+ Sbjct: 35 TPRPRHVGILVETDDSWGRNVVEAICRF--GHSSDWTVLISPRDSQGRLRLPKVWNGDGI 92 Query: 61 IADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVN 120 IA + + +++P+V VG + + +ATD+ A + AF HL+E+G+ Sbjct: 93 IASLRTASSVRHVKSLNLPVVDVGIMIPKCDWF---ARVATDDAARAKMAFEHLRERGLT 149 Query: 121 RFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQT 180 FA Y P R++ R AF V E Y +Y+ W + + WL T Sbjct: 150 HFACYAPPIG---RYSDVRSAAFVHAVTEGGYECAMYEAPHDDSAGWLTNYSNVRRWLST 206 Query: 181 LPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGAR 240 LP GI A AR ++++C I +P++L V+ D++EL ++ +S+V + Sbjct: 207 LPRPLGIFAADPYPARQLVEICSADSIRIPDELSVLSGDDDELLCNVATPQISAVELASH 266 Query: 241 QMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACK 300 Q+G A+++L +++ P + L+PP++V R STD ++ D + + + YIR+ A Sbjct: 267 QIGETASRMLAKMMSGSATPKRERLIPPLQVRGRHSTDILAIPDNEIAEILRYIRDKARD 326 Query: 301 GIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMC 360 GI V +L+ ISR LE+RF+ E+ + I ++ LL+ + I+ I+ Sbjct: 327 GITVTDLLNEFPISRRRLEQRFRAELNRSPAEEIRRVRMSHVARLLLDSDKPISTIAYES 386 Query: 361 GYPSLQYFYSVFKKAYDTTPKEYRDVN 387 G+ + F++ + TTP EYR N Sbjct: 387 GFATGASLSQAFRQHFGTTPGEYRRQN 413 >UniRef50_A6CDQ7 Xylose operon regulatory protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CDQ7_9PLAN Length = 388 Score = 177 bits (449), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 113/392 (28%), Positives = 196/392 (50%), Gaps = 16/392 (4%) Query: 2 FTKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARIDKIK---DWLGD 58 F +R +I LL + + RQ+++G+ +Y Q WD +IE FR ++++ W G Sbjct: 3 FPERRKIALLVQTSSDWSRQIIQGIADY-ALEQGGWDFWIE--FRGLQEQLRLPASWNGH 59 Query: 59 GVIADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKG 118 G + D +I+Q++ +P V V L + + + +D A A KG Sbjct: 60 GTVCRLTDARIQQSILRRKLPAVNVSW---LGKHSAKIPKVVSDERACARLAADFFLRKG 116 Query: 119 VNRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLE---TAPENWQHAQNRLA 175 + G + + E E+ R + E GV YQ T +++Q Q RL Sbjct: 117 FRSCGYIGPDPTLKYQPIIENEFQKRIVQGE----GVCYQFPYYELTKEDDYQKQQKRLK 172 Query: 176 DWLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSV 235 +WL LP ++ + R + VC + H+ +P+++ ++ I+++ L LS V LS + Sbjct: 173 EWLWELPKPVALLVWSSKVGREVATVCVNHHLEIPDQVAILSIEHDPLMSALSPVPLSCI 232 Query: 236 AQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIR 295 Q +GY+AA+LL +L+ P + IL+PP+ + ER STD D V +A+ +IR Sbjct: 233 NQSPHVVGYEAAQLLDQLIQGAPPPAEPILIPPLLIEERASTDTLFADDGLVREAIQFIR 292 Query: 296 NHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINE 355 HA + ++V + D + +SR LE RF++ + + A I EKL++ LL T L+I++ Sbjct: 293 QHAQEPLQVSDLTDHLNVSRRILEHRFQKALHRSPAAEIRQEKLKRIIKLLQETKLTISQ 352 Query: 356 ISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVN 387 I+ CG+ + +F + +P+EYR N Sbjct: 353 IAARCGFQHQEAMIRMFGRVTGMSPREYRQQN 384 >UniRef50_Q7UHJ2 Xylose operon regulatory protein n=1 Tax=Rhodopirellula baltica RepID=Q7UHJ2_RHOBA Length = 403 Score = 175 bits (444), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 107/386 (27%), Positives = 202/386 (52%), Gaps = 17/386 (4%) Query: 8 ITLLFNANKAYDRQVVEGVGEYLQASQSEW-----DIFIEEDFRARIDKIKDWLGDGVIA 62 + LL +++AY R ++ G+ Y Q Q +W ++ I D + + + W GDGV+ Sbjct: 11 VALLIESSRAYGRGLLRGIAAYAQ-DQGDWSLRHQEMTINADPPSWLSR---WQGDGVLV 66 Query: 63 DFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRF 122 + ++ +A+ D+ +P++ + S + TD ++V A HL+++G +F Sbjct: 67 RAETPKMIRAIQDLGLPVIDL----RCWRSAGKIPGFDTDPASVVRLAVDHLRDRGYTQF 122 Query: 123 AFYGLPES--SGKRWATEREY--AFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWL 178 F G + S +R R+Y + V + G V+ A ++ + L WL Sbjct: 123 GFCGFGGANYSDRRLTEMRKYVRSLGHDVVAYESPGPVHATTFDAEQSGMLDEVGLGRWL 182 Query: 179 QTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQG 238 ++L G++A D RA+ +L C +I VP+++ V+G+DN+++ L L+SV Sbjct: 183 KSLAKPVGVLACNDIRAQQLLNACHECNIHVPDEIAVVGVDNDDVICPLCSPPLTSVEPN 242 Query: 239 ARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHA 298 +++GY+AA +L R++ E +P + VP R++ R STD + D I+A +IR +A Sbjct: 243 TQKIGYEAAAMLDRMMSGEIVPAELTWVPARRIVVRGSTDSIPVDDAEFIKAYRFIRENA 302 Query: 299 CKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQ 358 C+G+ V V DAV +SR +LE+R + + ++ +I + +L + + LL +T+ + +I++ Sbjct: 303 CRGVSVQDVADAVPMSRRSLERRMRTYLDQSPSDLIASIRLARIKELLETTSQPLKKIAR 362 Query: 359 MCGYPSLQYFYSVFKKAYDTTPKEYR 384 + G+ ++ FKK P YR Sbjct: 363 LTGFNYDEHMAKFFKKLTGVPPGHYR 388 >UniRef50_A3ZQ62 Xylose operon regulatory protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZQ62_9PLAN Length = 391 Score = 175 bits (443), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 109/384 (28%), Positives = 188/384 (48%), Gaps = 15/384 (3%) Query: 8 ITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFR-ARIDKIKDWLGDGVIADFDD 66 + LL +++ Y R + GV +Y + ++ + +E A + I+ W DGVI + Sbjct: 12 VLLLIESSRGYGRACLHGVADYCRIHRNWQILHVERRLNEALPEAIQHWNIDGVITRIET 71 Query: 67 KQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRFAFYG 126 + + + + P V + GSY TD+ A E A H E+G+ A+ G Sbjct: 72 DDVMETIDRLGRPTVDLRGSYFPQRGA----TFDTDHAACAEMAVEHFVERGLRDIAYCG 127 Query: 127 LPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENW------QHAQNRLADWLQT 180 P G ++ R F ++ + R + G + + + N L W+Q+ Sbjct: 128 YP---GIDFSDLRAAPFERIARQHGCRTHSFVGSQVDRDAMVRELLGESETNELGKWVQS 184 Query: 181 LPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGAR 240 LP GI+ D RAR +L C+ + VPE + ++GIDN+ L LSS+ A Sbjct: 185 LPRPCGILGCNDVRARQVLMSCKLAGVAVPEDIALLGIDNDLTICNLVTPLLSSIEPDAH 244 Query: 241 QMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACK 300 ++GY+ A L RL+ E++ + +L+PP ++ R S+D ++ D V +HYI HAC Sbjct: 245 RIGYEGAASLDRLMKGEQVE-KHVLIPPKSIVVRGSSDVMAIADREVAAIVHYISEHACS 303 Query: 301 GIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMC 360 G+ V+ + + +SRS+L++RF++E+G I + I +++ A++LL T L + I+ Sbjct: 304 GLSVEMIANQFHLSRSSLDRRFQQELGRGIKSEIDRVRIDHAKALLRYTDLKLIAIAHHT 363 Query: 361 GYPSLQYFYSVFKKAYDTTPKEYR 384 Y S S FK+ TP +R Sbjct: 364 SYSSAAKLVSAFKRITGVTPGAFR 387 >UniRef50_A6DIY5 Xylose operon regulatory protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DIY5_9BACT Length = 386 Score = 174 bits (441), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 114/381 (29%), Positives = 193/381 (50%), Gaps = 14/381 (3%) Query: 7 RITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIE-EDFRARIDKIKDWLGDGVIADFD 65 R+ L F + +V+ G+ + A+ W E R I +K+W GDG+IA + Sbjct: 13 RVALAFPIGVDHLTEVLYGIRNHPCAAN--WQFLTNPERHRLEIRDLKNWDGDGIIAQIN 70 Query: 66 DKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRFAFY 125 ++ + + + +P + + G L +S PV + D + + A +KG FA+Y Sbjct: 71 SQEEAELIQSLGIPCINISGV--LKKS--PVPRVCADYEEIGKKAAEFFLKKGFRNFAYY 126 Query: 126 GLPESSGKRWATEREY-AFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQTLPPQ 184 G+ K W + Y FR LVA+ Y +Y+ WQ + + L +L+TL P+ Sbjct: 127 GIK----KVWYSAEVYRGFRNLVADHGYEVDLYEAHSGVSTEWQQSNDGLESFLRTLAPK 182 Query: 185 TGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGY 244 T ++A D RA +LQ C + I VPE++ V+G +N+++ L+ LSSVA+ R++G+ Sbjct: 183 TALLAAHDPRAVEVLQTCARIGIKVPEQISVMGENNDKVNCELATPTLSSVARQGRKLGH 242 Query: 245 QAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKV 304 + A+LLH ++ E + + +P + ER ST S+ +P + + + +IR + + I V Sbjct: 243 KVAELLHSFMNGESVAGDHV-IPCGEIFERDSTAVLSIYNPEIAKVVEFIRLNVLQQINV 301 Query: 305 DQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLL-ISTTLSINEISQMCGYP 363 + +G SR LE FKEE+ +T I + + EKA+ LL + +L I E + G+ Sbjct: 302 ESAASHIGRSRRWLEYHFKEELQQTPLEFISSVRAEKAKELLELDASLRITEAAYKLGFS 361 Query: 364 SLQYFYSVFKKAYDTTPKEYR 384 S KK Y + KE R Sbjct: 362 STNQLNKYLKKFYGMSAKEIR 382 >UniRef50_A6C7I7 Xylose operon regulatory protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C7I7_9PLAN Length = 374 Score = 171 bits (433), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 106/378 (28%), Positives = 194/378 (51%), Gaps = 13/378 (3%) Query: 10 LLFNANKAYDRQVVEGVGEYLQASQSEWDIFI---EEDFRARIDKIKDWLGDGVIADFDD 66 +L + + + R V++G+ ++ + W ++I ++ +R R+ + +W GDG+IA D Sbjct: 1 MLIDPDDTWGRSVIQGIASAVR-NVLPWSLWIAPRDQQWRLRVPR--NWQGDGIIAAIRD 57 Query: 67 KQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRFAFYG 126 + ++ +D+P V V + YP + + T++ E AF H +E+ + FA+YG Sbjct: 58 DKTADHVSGLDLPTVNVSS---WEKDYPDCYRVKTNDTRRAEMAFSHFRERSFSHFAYYG 114 Query: 127 LPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQTLPPQTG 186 P +R++ R F+ +V + ++ T E Q R WLQ P Sbjct: 115 PP---SQRYSQSRGDYFQDVVQAAGFVCDTFRSRTTTREK-SSIQERTLRWLQQAPRPLA 170 Query: 187 IIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQA 246 I A + +VC + VPE++ ++ D ++L +S LSS+ + Q+G + Sbjct: 171 IFAADPHSGVLLTEVCSAVGFRVPEEIAILVGDTDDLLCNISAPPLSSIVLASEQIGMTS 230 Query: 247 AKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQ 306 ++L LL +++ + +PP+ VIER+S++ ++ DP ++ A+ +IR A GI+V Sbjct: 231 VRILESLLKGKKVKSKVHALPPLHVIERQSSEMLAIDDPLLVDALRFIRVRAHTGIQVSD 290 Query: 307 VLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQ 366 VL V ISR +LE+RF++ + T I K+E+ + LLIST ++ +I+ G+ S Sbjct: 291 VLQTVPISRRSLEQRFRQLLNCTPADEIRRIKIERVKQLLISTDKTVEQIAASSGFCSPG 350 Query: 367 YFYSVFKKAYDTTPKEYR 384 F+K TP E+R Sbjct: 351 QLCFAFRKQIGQTPIEFR 368 >UniRef50_B1ZWW6 Transcriptional regulator, AraC family n=4 Tax=Opitutus terrae PB90-1 RepID=B1ZWW6_OPITP Length = 445 Score = 167 bits (422), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 116/385 (30%), Positives = 200/385 (51%), Gaps = 19/385 (4%) Query: 8 ITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARID----KIKDWLGDGVIAD 63 + L+F ++ GV Y +AS S W +++++ RA ID + K W G VI+ Sbjct: 62 VLLVFKTRYEDAAGMLRGVTHYERASNS-WVAYLDDEGRAEIDPRWVRSKRWCG--VISR 118 Query: 64 FDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRFA 123 + + +++ +P+V + A P V I DN AL + + E+G FA Sbjct: 119 HTTPTLARTCSELGIPLVDLSD----APPMPHVSKIRADNAALGQMGAEYFLERGYRHFA 174 Query: 124 FYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQ---GLETAPENWQHAQ-NRLADWLQ 179 F G + W+ ER F + + + +++ + AP W+ A+ + L W++ Sbjct: 175 FCGYRDLG---WSQERRTGFVEALGLAGHPCELFEVERPSDLAP-FWEGAEADALTLWVR 230 Query: 180 TLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGA 239 LPP+ ++A +D A +++ E + VPE++ V+G +N+ + L+ +SSVA + Sbjct: 231 GLPPRVAVMACSDLCAFQVMRAAEAAGVLVPEQMGVLGANNDPMRCELANPPISSVAANS 290 Query: 240 RQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHAC 299 Q GYQAA+ L L+ + + + P+ V+ R+STD +++D V A+ YIR HAC Sbjct: 291 FQAGYQAAQHLDELMAGRASGVIDVRIEPLGVVTRKSTDVVAVSDAVVSHALSYIREHAC 350 Query: 300 KGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQM 359 KG+ VD VL V +SRS LE RF+ VG + A I ++ + LL+ T L + EI+++ Sbjct: 351 KGVSVDDVLRQVLVSRSKLESRFRRHVGRSPQAEIRRVQVMRIIQLLLETDLPLAEIAEL 410 Query: 360 CGYPSLQYFYSVFKKAYDTTPKEYR 384 G+ ++Y +FK+ +P YR Sbjct: 411 TGFVHVEYMCVLFKRFTGESPGRYR 435 >UniRef50_B5JIB2 Transcriptional regulator, AraC family protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JIB2_9BACT Length = 394 Score = 166 bits (420), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 115/402 (28%), Positives = 193/402 (48%), Gaps = 30/402 (7%) Query: 4 KRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARIDKIKDWL----GDG 59 +R R+ L+ + ++ + ++ + ++W +F+ D +AR DWL DG Sbjct: 3 ERPRVALVLRGWLEENLNILHSLAKF-KRFNAKWHVFV--DDQARGADNPDWLLDQGWDG 59 Query: 60 VIADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGV 119 +I ++ + + + V + +L E P + +N A+ + H EKG Sbjct: 60 IICKERSGELFRKARERGIACVDMSDDGNLREGCPKMR---PNNLAIGHTGAEHFIEKGF 116 Query: 120 NRFAFYGLPESSGKRWATEREYAF---------RQLVAEEKYRGVVYQGLETAPENWQHA 170 FA+ G + W+ ER + + V E Y GV E A E+ Sbjct: 117 RHFAYCGF---GNELWSRERGEGYIEALTLAGKKCAVFESDYPGVSVPAWEFAEED---- 169 Query: 171 QNRLADWLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRV 230 +A W+ TLP I+A D RA HI+ C VPE++ ++GI+N+ L Sbjct: 170 --EMAKWIDTLPKPVAILACNDLRAMHIVNACHQGEFRVPEEVAILGINNDSARCELCSP 227 Query: 231 ALSSVAQGARQMGYQAAKLLHRLLDKEEMP--LQRILVPPVRVIERRSTDYRSLTDPAVI 288 +LSS+ + A + L L+ + + + P+ V+ RRST ++ DPAV Sbjct: 228 SLSSIPVDVTEYARVAGETLEALMKGADPADFKEVTYIDPLEVVTRRSTSILAVEDPAVA 287 Query: 289 QAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLIS 348 QA++ IR +ACKGI V+QV +V ISRS LEKRF++ VG + I ++ + + +L Sbjct: 288 QALNLIRENACKGITVEQVAKSVHISRSLLEKRFRQYVGRSPQVEIRHAQVMRIKQMLTE 347 Query: 349 TTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSEV 390 T LS+ E++++ G+ +Y VFK+ TTP YR + E+ Sbjct: 348 TELSLAEVAEITGFEHPEYMSVVFKRLTHTTPSAYRKKSKEL 389 >UniRef50_C0A9R7 Xylose operon regulatory protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A9R7_9BACT Length = 403 Score = 166 bits (419), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 114/393 (29%), Positives = 186/393 (47%), Gaps = 24/393 (6%) Query: 8 ITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARIDKIK-DWLGDGVIADFDD 66 + LL + + R ++ G+ Y S W++ +E A + W GDGVIAD Sbjct: 12 VALLIDTACQWTRHIILGINRYKSMLASPWNLLVEPHGSADPLALPHGWQGDGVIADIRF 71 Query: 67 KQIEQALADVDVPIVGVG----------GSYHLAESYPPVHYIATDNYALVESAFLHLKE 116 ++ L VP+V V G + +P V D A E A H E Sbjct: 72 PKMAAQLRKYGVPVVNVSDSTVATATKRGGGAAMQGFPQV---CIDRKAACELAVEHFTE 128 Query: 117 KGVNRFAFYGLPESSGKRWATEREYAFR-QLVAEEKYRGVVYQGLETA--PENWQHAQNR 173 +G FA+ L +G W E F L A Y+ A +W + Sbjct: 129 RGFTHFAYIDL---AGNEWDRETHRYFTGALRAAGIKECASYEAQNRAWGAPDWSIDIDA 185 Query: 174 LADWLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALS 233 L WL++LP + + + R ++ C + + VPE++ ++ + +E+ + V +S Sbjct: 186 LGAWLRSLPKPVAVFSWSVGR--EVIHACRRVGLKVPEEVALLLLAYDEIFSEVGYVPIS 243 Query: 234 SVAQGARQMGYQAAKLLHRLLDKEEMPLQ--RILVPPVRVIERRSTDYRSLTDPAVIQAM 291 + ++GYQAA+ L RLL + +P + R LVPPV V R+STD ++T+P + A+ Sbjct: 244 GIVHAWEEIGYQAAERLGRLLAGKRIPAREWRTLVPPVGVRTRQSTDTLAITNPVITSAL 303 Query: 292 HYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTL 351 YIR +A + + VD+V + G+SR LE+ F +G T I ++E+A+ LL T Sbjct: 304 GYIRENAGRPLLVDEVAEHAGVSRRKLERHFLHVMGRTPADQIRHVQVERAKVLLAETNR 363 Query: 352 SINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 I E+++ G+ S +Y +VF+K TP +YR Sbjct: 364 PIPEVAEAAGFGSPEYMATVFQKKLGLTPLKYR 396 >UniRef50_D1W5K7 Transcriptional regulator, AraC family n=1 Tax=Prevotella buccalis ATCC 35310 RepID=D1W5K7_9BACT Length = 387 Score = 163 bits (413), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 118/398 (29%), Positives = 182/398 (45%), Gaps = 39/398 (9%) Query: 7 RITLLFNANKAYDRQVVEGVGEYLQASQSEWDIF-------IEEDFRARIDKIKDWLGDG 59 R+ LL + + Y +++ G+ +Y Q S W I +E + + W D Sbjct: 3 RLILLIDFTETYATELLRGILDYSQ-SHEPWVICRMPPSYRVEHGIEGVLQWARQWKADA 61 Query: 60 VIADFDDKQIEQALADVDVPIVGVGGSYHLAESY-------PPV--HYIATDNYALVESA 110 +I F+ DV + G LA+ + P + YI N L Sbjct: 62 IIGQFNSND--------DVSVFAEYGIIALAQDFIQRFQNIPNITGDYIGQGN--LAAEF 111 Query: 111 FLHLKEKGVNRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRG---VVYQGLETAPENW 167 F+ +KG FAFYG + W+ ER F + Y + Q LE W Sbjct: 112 FI---KKGFRNFAFYGYANAV---WSQERCKGFSDTIKSFGYHSPSIYIKQSLEYL---W 162 Query: 168 QHAQNRLADWLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYL 227 + L +WL LP T I+A D RA IL+VC L I VP ++ V+G+DN+E+T L Sbjct: 163 YYDLEPLVEWLSKLPSSTAILACDDTRASVILEVCRLLRIKVPSEIAVLGVDNDEITCTL 222 Query: 228 SRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAV 287 + LSS++ R+ GY +A+ + +L+ + I+V + V+ERRSTD ++ + Sbjct: 223 THPLLSSISLDVRRAGYNSAQYIDHVLNHNYKRVDNIMVDYMGVVERRSTDIFMTSNKHI 282 Query: 288 IQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLI 347 + + +I + VD++L V +SR LEK FK E G +IH I + E + L+ Sbjct: 283 LTVLSFIHQFYADNLSVDRLLKLVPMSRRLLEKTFKAETGTSIHQYILDLRFEHMKHKLV 342 Query: 348 STTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRD 385 ST I E++ G + +FKK TP EYRD Sbjct: 343 STDTPIAELALSTGLSDAKNVARMFKKRMGITPLEYRD 380 >UniRef50_D2QUQ8 Transcriptional regulator, AraC family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QUQ8_9SPHI Length = 387 Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 118/390 (30%), Positives = 192/390 (49%), Gaps = 22/390 (5%) Query: 6 HRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRAR----IDKIKDWL----G 57 H+I LL + ++ Y + +++G+ +Y + W +F R ID I DW Sbjct: 2 HKIILLIDFSEEYSKSLLKGITKYSR-EHGPW-VFCRMPLFHRETMGIDGILDWAREWEA 59 Query: 58 DGVIAD-FDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKE 116 DG++ ++D +E+ + +P++ + P + + A+ FL + Sbjct: 60 DGIVGQLYNDVSVEK-IVQAGIPVIAQDFKERFTD-IPNITGAYRETGAMGAEYFL---K 114 Query: 117 KGVNRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETA--PENWQHAQNRL 174 KG FAFYG S W+ ER F + V Y+ V Y E A E W + + L Sbjct: 115 KGFQHFAFYGF---SNIVWSRERAEGFEERVTRAGYQ-VTYFEHEKARSSELWYYKPSSL 170 Query: 175 ADWLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSS 234 ++WL +LP I+ D +HI + C H I +PE++ V+G+DN+E+ LS LSS Sbjct: 171 SEWLASLPKPIAIMTCDDRLGQHITEACRHSGIRIPEEVAVLGVDNDEMFCELSDPPLSS 230 Query: 235 VAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYI 294 + A + GY AA LL RL+ KE I+V P +VI R+STD + D + ++ YI Sbjct: 231 ITLDAEKGGYDAAHLLDRLIRKEITQGYDIVVEPTQVITRQSTDIYATPDEYIAVSLKYI 290 Query: 295 RNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSIN 354 + K ++VD V+ V +SR +LE RF++ +G I+ I ++EK L+ T ++ Sbjct: 291 HQNIDKNLQVDDVVKQVPLSRRSLEMRFQQVIGYPIYKYIQNLRIEKFSKKLLETDQAVF 350 Query: 355 EISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 EI+ G + FK+ TP +YR Sbjct: 351 EIAMDLGLNDTRNIARQFKQIKGCTPLKYR 380 >UniRef50_Q64VG9 Transcriptional regulator n=8 Tax=Bacteroidales RepID=Q64VG9_BACFR Length = 391 Score = 163 bits (412), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 100/337 (29%), Positives = 171/337 (50%), Gaps = 16/337 (4%) Query: 53 KDWLGDGVIADFDDKQIEQALADVDVPIVGVGGSYHLAESYPP----VHYIATDNYALVE 108 K W D +I FD+ D +V + G +A+ Y + I D + Sbjct: 55 KAWQADAIIGRFDN--------DDNVELFRKNGIIAIAQDYKSRFSNIPNITGDYHKTGR 106 Query: 109 SAFLHLKEKGVNRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPEN-W 167 A KG FAFYG ++ W+ ER F + +AE + Y E + ++ W Sbjct: 107 MAAEFFLSKGFRNFAFYGYRDTV---WSQERCEGFYECIAEHGFGNNFYSYQEQSLDDLW 163 Query: 168 QHAQNRLADWLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYL 227 + L WL++LP T ++A D + I ++C+ +I VP+K+ ++G+DN+E+ L Sbjct: 164 FYEAPPLLTWLKSLPQPTALMACDDNQGNRITEICKVNNIRVPDKIAILGVDNDEIICNL 223 Query: 228 SRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAV 287 S LSS++Q + G++AA+L+ LL+ EE Q +++ PV ++ R STD+ S T+ + Sbjct: 224 SDPPLSSISQNIVRGGFEAAELIEHLLNDEECSYQDVVLQPVNIVNRLSTDFYSTTNTHI 283 Query: 288 IQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLI 347 A+ YI + I V ++ V +SR LE RFKE ++IH I ++E+ LL+ Sbjct: 284 HTALKYIHRNLANDITVSDIVKQVPLSRRLLEIRFKEVTKQSIHKYILNLRIERFAQLLL 343 Query: 348 STTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 ++ I ++++ G +L+ FK + +P EYR Sbjct: 344 ASDAPIADVAEQVGINNLKNLSRQFKTLKNVSPYEYR 380 >UniRef50_C1ZFQ8 Transcriptional regulator n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZFQ8_PLALI Length = 409 Score = 162 bits (410), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 111/391 (28%), Positives = 191/391 (48%), Gaps = 17/391 (4%) Query: 1 MFTKRHR-ITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARIDKI---KDWL 56 M HR + L+ + + + RQV+ G+ +Y + WD FIE R +K+ K W Sbjct: 26 MPPTMHRSVALIVHTSSDWTRQVLRGIAQY-ASEHGFWDFFIEP--RGHDEKLLIPKGWS 82 Query: 57 GDGVIADFDDKQIEQALADVDVPIVGVG--GSYHLAESYPPVHYIATDNYALVESAFLHL 114 GDG+IA +E+ + ++P V V G + L + + +D A A H Sbjct: 83 GDGIIARLTHPALEKQILKSNLPCVNVSWMGQHSLR-----IPKVVSDEAACGRLAAEHF 137 Query: 115 KEKGVNRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNR- 173 E+ FA+ G +G + Y L A ++ +YQ P Q + Sbjct: 138 LEQSFRSFAYIGPIHRAGYDDLLGKNYINTLLQA--GHQTSIYQPTVPIPVPDLLTQRKG 195 Query: 174 LADWLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALS 233 WL+ LP T I + R ++ +P+ + ++ +N+ L L+ V LS Sbjct: 196 FLQWLKMLPKPTAIFTWSGEVGRELMTCARLSRFRIPDDIALLVGENDPLLSALAPVPLS 255 Query: 234 SVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHY 293 ++ Q ++GY+AA LL +L++ E P + ILVPPV V++RRST+ ++ DP V A+ + Sbjct: 256 NIDQAPVRVGYEAATLLDKLMNGEPAPEEPILVPPVGVVQRRSTETSAVDDPLVDMAVRF 315 Query: 294 IRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSI 353 +R+H + I++ V A+ +SR LE RF + + +T ++ +L+ + LL TTL + Sbjct: 316 MRDHLSEPIQIADVEKALNVSRRVLEHRFHKVLDDTPANVLRRMRLQNVKRLLGETTLPL 375 Query: 354 NEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 I+Q+ G+ ++ F++ TP EYR Sbjct: 376 ARIAQLTGFNHVEVLVRTFRRELGVTPGEYR 406 >UniRef50_C6W1V7 Transcriptional regulator, AraC family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W1V7_DYAFD Length = 386 Score = 159 bits (401), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 107/388 (27%), Positives = 191/388 (49%), Gaps = 19/388 (4%) Query: 6 HRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRAR----IDKIK----DWLG 57 ++I LL + + Y + +++G+ Y W IF R ID I +W Sbjct: 2 YKIILLLDFAEEYSKSLMKGINAY-SKEFGPW-IFCRMPLFHRETIGIDGILKWALEWGA 59 Query: 58 DGVIADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEK 117 DG++ +K+I++ L +P++ + E + + I + + + +K Sbjct: 60 DGIVGQLYNKEIDKILR-AGIPVI----AQDFKERFTEIPNITGAYHEAGQMGADYFLKK 114 Query: 118 GVNRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLET-APENWQHAQNRLAD 176 G FAFYG + W+ ER F + + ++ ++ ++ ++ + E W + + L+ Sbjct: 115 GFTNFAFYGFNDIV---WSRERAEGFEEHLRKKGHKVHYFEHKKSRSTELWYYKPSSLSR 171 Query: 177 WLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVA 236 WL++LP G++ D + +HI + C H+ I +PE++ V+G+DN+E+ LS LSS+A Sbjct: 172 WLKSLPKPIGLMTCDDNQGQHITEACRHVGIRIPEEVAVLGVDNDEMICDLSDPPLSSIA 231 Query: 237 QGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRN 296 + GY AAKLL ++ ++V P +VI R STD + D + ++ YI Sbjct: 232 LDVEKGGYDAAKLLDHMIRHGTAGFYDVVVRPTQVITRHSTDIYATNDDHIASSLKYIHQ 291 Query: 297 HACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEI 356 + K + VD+V+ V +SR LEKRF E G I+ I ++EK L+ T +S+ EI Sbjct: 292 NIEKNLHVDEVVKQVPLSRRALEKRFLEITGYPIYKYIFNLRIEKFTQKLLDTDMSVFEI 351 Query: 357 SQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 + G + F++A +P YR Sbjct: 352 ALDMGLGDSKNIARQFRQAKGCSPSAYR 379 >UniRef50_B5JEL5 Transcriptional regulator, AraC family protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JEL5_9BACT Length = 387 Score = 157 bits (397), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 95/332 (28%), Positives = 167/332 (50%), Gaps = 12/332 (3%) Query: 59 GVIADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKG 118 G+I D E AD+++P+V + S S P + + D+ ++ A HL ++G Sbjct: 61 GLIVAAHDAAEEARFADLEIPVVNISNSM----SAPRIPVVTQDDVSVGRLAAEHLIDRG 116 Query: 119 VNRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWL 178 FAF+G GK ++ ER FRQ + + + P + + ++ Sbjct: 117 CRNFAFWG---DKGKSYSDERLQGFRQTLGSRPLQVKLGGRNRVRPHPVFKS---MKAFM 170 Query: 179 QTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQG 238 +TLPP+TG+ A D A + L+ L VP+ + V+G +++ + V LSS+ Sbjct: 171 KTLPPKTGLFATLDDSALYFLRAARELGRSVPDDIAVLGAGDDDFLVEIESVPLSSIRLP 230 Query: 239 ARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHA 298 AR++GYQAA LL +++K+ + I +P + ER STD DP V + M Y+R+ Sbjct: 231 AREIGYQAAALLDEMIEKDTRNVDSIRLPVHGISERHSTDALQFEDPVVTKVMRYLRDDI 290 Query: 299 CKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQ 358 + ++ G+SRS L+ RF+ VG ++ IH ++ +A+ LL ++ L++ I+ Sbjct: 291 T--CQASDLIAISGVSRSGLQTRFRAAVGRSLLEEIHRARISQAKHLLATSDLTLENIAD 348 Query: 359 MCGYPSLQYFYSVFKKAYDTTPKEYRDVNSEV 390 G+ S Q +++F K+ T P +R N + Sbjct: 349 RVGFNSAQRLHAIFTKSVGTPPGVFRTRNRAI 380 >UniRef50_B4CUN0 Transcriptional regulator, AraC family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUN0_9BACT Length = 383 Score = 156 bits (395), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 106/378 (28%), Positives = 176/378 (46%), Gaps = 22/378 (5%) Query: 18 YDRQVVEGVGEYLQASQSEWDIFIEEDFRARIDKIKDWLGDGVIADF---DDKQIEQALA 74 YD ++++G+ Y A++ W + ++ W GDGV+A DD + +A Sbjct: 14 YDHRLLQGIATY--ATEHRWHLAAHSIIHEKVIPW-GWEGDGVLAWLAAGDD--LAHFVA 68 Query: 75 DVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRFAFYGLPESSGKR 134 V P V + + + P ++ D+ + H ++G+ F FY S + Sbjct: 69 SVKKPTV----DFSMRRPHLPFAHVVQDHAKTGQLVASHFLDRGLRHFRFY----SDSEN 120 Query: 135 WA-TEREYAF-RQLVAE----EKYRGVVYQGLETAPENWQHAQNRLADWLQTLPPQTGII 188 W+ ER F R L A E +R G + W + L +Q+ P + Sbjct: 121 WSQVERGEGFARALTASGEECEWWRWRETSGQGSGQNQWLRRREWLLRQIQSAPKPLAVF 180 Query: 189 AVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAK 248 A I +VC I VP ++ ++GID+ L+ + ++S V + GY+ A+ Sbjct: 181 TANGTLAVEIQEVCAEAKIQVPSEVAIVGIDDYLLSVGAANRSISGVDTNLEEQGYRGAE 240 Query: 249 LLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVL 308 LL R++ P++ + +PP +VI R+S+D ++ V + +H+I H + I VD V Sbjct: 241 LLDRMMRGARQPVKPVRIPPAQVITRKSSDILAVNHGGVARGLHFIAEHFAQAISVDDVA 300 Query: 309 DAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYF 368 A G+SR L + F E VG T I +L A+ LL T I I+Q GYPS+ F Sbjct: 301 RAAGMSRRGLHQAFSEHVGCTPGDKIRGVRLNLAKRLLAETEDKIESIAQQSGYPSINTF 360 Query: 369 YSVFKKAYDTTPKEYRDV 386 + F++A TTP E+R + Sbjct: 361 FIAFRRAEKTTPAEFRKI 378 >UniRef50_B4D2S2 Transcriptional regulator, AraC family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D2S2_9BACT Length = 385 Score = 155 bits (392), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 115/395 (29%), Positives = 188/395 (47%), Gaps = 19/395 (4%) Query: 1 MFTKRH--RITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARIDK-----IK 53 M T+R R+ LL + Y R+++ GV Y+ A+ W F+E RA +D ++ Sbjct: 1 MPTRRRTPRVALLIETTRTYTRELLAGVRRYI-AAHGPWSTFLE--LRA-LDSSPPAWLR 56 Query: 54 DWLGDGVIADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLH 113 DW GDG++ Q+ + + +P + + + + S P Y+ DN + S H Sbjct: 57 DWDGDGILTRTFTPQMGRLIEATGLPAIELR-TTNFGGSRP---YVGMDNRLIGASVAEH 112 Query: 114 LKEKGVNRFAFYGLPESSGKRWATEREYAFRQLVAEEKYR-GVVYQGLETAPENWQHAQN 172 E+G +FA Y L S + ER F V R + + + ++W+ +Q Sbjct: 113 FLERGYRQFAAYSLHTES---FFVERIRNFVTTVEALGARCSRLPETTSDSAKDWEKSQA 169 Query: 173 RLADWLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVAL 232 RL WLQ LP GI A D +L+ C+ + VPE++ V+G +NEE + L Sbjct: 170 RLVAWLQELPKPVGIFAANDQLGVRLLEACQRAGVAVPEEVAVVGAENEETLCSFATPPL 229 Query: 233 SSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMH 292 +SV + +GY AA++L +L+ + +L+PP ++ R S+D + DP V A Sbjct: 230 TSVRYDGQAVGYAAAEMLDQLMRGRRLRRSAVLIPPKGIVVRHSSDSLVINDPFVAHAAR 289 Query: 293 YIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLS 352 IR A G+ VDQ+ + SRS L++R K + T I + + LL T L+ Sbjct: 290 LIREEALHGLNVDQLCHKLNASRSTLDRRMKAALQRTPKEEILRVRFREVERLLRETDLT 349 Query: 353 INEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVN 387 I+ I+ G+ Y + FK+ + TP +R V Sbjct: 350 IDTIAAQTGFAHSHYLQAAFKETHGVTPGAWRRVQ 384 >UniRef50_C0A646 Xylose operon regulatory protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A646_9BACT Length = 393 Score = 152 bits (385), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 103/338 (30%), Positives = 156/338 (46%), Gaps = 13/338 (3%) Query: 55 WLGDGVIADFD-DKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLH 113 W DG+I+ D + + + D P+V +G P V + D + A + Sbjct: 60 WREDGIISYLHADSALYEFIKKTDKPVVNIGNG-----KQPGVPTVKPDVRKIGVMAADY 114 Query: 114 LKEKGVNRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNR 173 E+G AF+ + R ER AFR E R + L + Q+++ Sbjct: 115 FFERGFRDMAFFLKSHAPAAR---ERWRAFRARAEELGARAHLMNWLRHSGGRVQYSEAA 171 Query: 174 LADWL----QTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSR 229 L +WL LP I+A D A ++ C IP+PE++ V+G++N+ L + Sbjct: 172 LVEWLGESVTALPKPLAIMAEHDEHAIEVIHACIQFSIPIPEQVAVLGVNNDPLRCEFAP 231 Query: 230 VALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQ 289 V LSS+ MGY+AA LL R+L E P + +L+PP V+ R STD ++ P V Sbjct: 232 VPLSSIDSNHEVMGYEAAVLLDRILHGETPPAEPVLIPPAGVVTRLSTDMMAIKHPHVAT 291 Query: 290 AMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLIST 349 +H+I + + I V V +S L F + VG TI I +++EKAR LL T Sbjct: 292 VLHHIWQNYTRAINAKTVAALVPLSYQRLHAAFLKNVGRTIANEITHKRMEKARELLAGT 351 Query: 350 TLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVN 387 +I+ CG+P+ VFK+ TP EYR N Sbjct: 352 AKKAYDIALECGFPNDDRMGRVFKRVLGVTPMEYRQQN 389 >UniRef50_A3ZVD0 Xylose operon regulatory protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZVD0_9PLAN Length = 416 Score = 149 bits (375), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 113/392 (28%), Positives = 188/392 (47%), Gaps = 27/392 (6%) Query: 6 HRITLLFNANKAYDRQVVEGVGEY------LQASQSEWDIFIEEDFRARIDKIKDWLGDG 59 H+ITL + +++ GV +Y +Q ++ ++ + +DK+ DG Sbjct: 37 HKITLAVVPSSDNQVRMIRGVMQYATETGRIQITKRAAIPYVPIEL---LDKLA---ADG 90 Query: 60 VIADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGV 119 +IA + ++ L + +P V + P VH +DN + HL G+ Sbjct: 91 IIAYAESQERINFLQSLGIPFVNLTLQSEPEAGVPVVH---SDNLQIGRRLAEHLLSLGL 147 Query: 120 NRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQ-------GLETAPENWQHAQN 172 FAF G R R+ F Q +AE + LET+ + Q Q Sbjct: 148 RNFAFVGHFAWYHNRM---RQTGFLQRLAESGFDAASIDISFDSELSLETS--DRQVHQG 202 Query: 173 RLADWLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVAL 232 L + LP G+ + D A I++ C+ + +P + VIG+++ L + L Sbjct: 203 ELQQAIAGLPEPCGVASCHDEFAHEIVEACKVIGRSIPHSVSVIGVNDYRLICETTMPGL 262 Query: 233 SSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMH 292 SSVAQ + ++GY AA+L+ +L++ E P + ILVPP ++I RRS+ + +L D V+ A+ Sbjct: 263 SSVAQNSERIGYLAAQLVDQLIEGAERPAKPILVPPGQLIVRRSSQFLALGDANVVAAVE 322 Query: 293 YIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLS 352 +IR+ + I V V+D + +SR LEKRFK +G +I I ++ A+ LL ST LS Sbjct: 323 FIRDRCHRPITVTDVVDHLHLSRKVLEKRFKTAIGHSIAHEIRLSRMRNAQHLLTSTPLS 382 Query: 353 INEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 I +++ G+ S F F++ TP YR Sbjct: 383 IVDVAVRSGFDSTSGFIRAFREHTGVTPANYR 414 >UniRef50_C0A1Z9 Xylose operon regulatory protein n=2 Tax=Opitutaceae bacterium TAV2 RepID=C0A1Z9_9BACT Length = 413 Score = 149 bits (375), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 104/403 (25%), Positives = 190/403 (47%), Gaps = 40/403 (9%) Query: 7 RITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIE-EDFRARIDKIKDWLGDGVIADFD 65 R+ LL + + R +++G+ YL+ + W IF+E I W+G+GVIA+ Sbjct: 20 RVALLVETSTTWARSILDGINNYLRKGHN-WQIFLEPHGSNESIRMPAGWVGEGVIAEIK 78 Query: 66 DKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRFAFY 125 D + + A +++P+V + ++P V +D A A + E+G FA+ Sbjct: 79 DLGMARHFASLNIPVVNLSQVTFRDIAFPTV---TSDIAACARMAGRYYFERGYQNFAYL 135 Query: 126 GLP--------ESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADW 177 L ++ + T+ +F L + + GV +W + LADW Sbjct: 136 RLERNALDAQHSANFGEFVTQAGGSFFSLGVKNRAWGVA---------DWNMSIKALADW 186 Query: 178 LQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQ 237 L LP GI + A R ++Q C + +PE++ ++ + ++E+ +S + +S + Sbjct: 187 LAGLPKPVGIFSW--AIGREVVQACHLAGLRMPEEVALVMLSDDEIFLEMSHIPISGIMH 244 Query: 238 GARQMGYQAAKLLHRLLDKEEMPLQRILV----------PPVRVIE------RRSTDYRS 281 Q+G++AA++L L+ + PPVR+I+ R+S+D + Sbjct: 245 PGEQIGHEAAQMLDELMTAAKSKKHAATFSGKSQPAASPPPVRLIQPLGVKTRQSSDVLA 304 Query: 282 LTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEK 341 +TDPA+ A+ YIR + ++VD V GISR +LE++F + + + I L + Sbjct: 305 ITDPALRTAISYIRQRVGEPLQVDDVARQAGISRRSLEQKFAKTLERSPADYIRDAHLAR 364 Query: 342 ARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 A+ LL TTL I +++ G+ S +Y +F+ +P YR Sbjct: 365 AKDLLRETTLPIPQVADAAGFSSPEYMAQLFRAKLGESPLRYR 407 >UniRef50_A3ZWC2 Xylose operon regulatory protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZWC2_9PLAN Length = 389 Score = 147 bits (370), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 107/350 (30%), Positives = 166/350 (47%), Gaps = 39/350 (11%) Query: 53 KDWLGDGVIADFD-DKQIEQALADVDVPIVGVGGSYHLAESYP--PVHYIATDNYALVES 109 +DW GDGVI +QI ++L DVP+V L+ES P P+ + DN A+ + Sbjct: 55 RDWQGDGVITLLGAQQQIWRSLQQFDVPMVD------LSESRPDVPLPRVTMDNVAIGQM 108 Query: 110 AFLHLKEKGVNRFAFYGLPESSGKRW----ATEREYAFRQLVAEEKYRGVVYQGLETAPE 165 A H ++G FAF RW + R AF +A+ R + Sbjct: 109 AAQHFLDRGFRHFAFV-------HRWELGVSQRRRDAFTAELAQYDRRCEIL-------- 153 Query: 166 NWQHAQNRLAD-------WL----QTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLC 214 +WQ + R AD WL LP I A D A I++ + VP+++ Sbjct: 154 SWQTQRGRQADTRQQRHRWLAQRLSELPKPLAIFAPRDIEAVEIIEAAMAISALVPDEIS 213 Query: 215 VIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIER 274 V+G+DN E + LSS+ Q+GY+ A LL RL+ E+ P + + P RV+ER Sbjct: 214 VLGVDNTETICDCLQTPLSSIDNNLEQVGYEGAALLSRLMAGEQSPTETFYIAPSRVVER 273 Query: 275 RSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMI 334 RSTD ++ P V A+ +++ +A I + V V +SRS LEK F+E + Sbjct: 274 RSTDSIAVPHPQVAAALRFMQENAHLPISMVDVFRTVAMSRSGLEKAFRENYVRPPMEEL 333 Query: 335 HAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 +L +A+ +L+ T I I++ G+ + Q VF++ TPK++R Sbjct: 334 RRIRLLRAKKMLLQTHEKIVNIAKSTGFETSQNLCRVFRQCVGMTPKQFR 383 >UniRef50_UPI00019688DE hypothetical protein BACCELL_02763 n=1 Tax=Bacteroides cellulosilyticus DSM 14838 RepID=UPI00019688DE Length = 372 Score = 145 bits (366), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 105/351 (29%), Positives = 167/351 (47%), Gaps = 8/351 (2%) Query: 35 SEWDIFIEEDFRARIDKIKDWLGDGVIADFDDKQIEQALADVDVPIVGVGGSYHLAESYP 94 S D E+ ID + W D ++ + E+ L + +P++ + Sbjct: 14 SREDFNDEKAIETVIDIAQRWGADAIMGQLSEVNTER-LRSIGIPVI----LQNYTNRVD 68 Query: 95 PVHYIATDNYALVESAFLHLKEKGVNRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRG 154 + I D Y E A + KG FAFYG +S W+ ERE F +AE Sbjct: 69 GISNITGDYYGTGEMAANYFLRKGYTNFAFYG---TSDTIWSREREEGFCTRLAEVGQHA 125 Query: 155 VVYQGLETAPENWQHAQNRLADWLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLC 214 +Y Q L WLQ LP T + A D A I +VC +I VP+ L Sbjct: 126 YIYNEESNIRYGSTSDQQALQAWLQQLPHPTALFACDDVFALRITEVCGISNIQVPQDLA 185 Query: 215 VIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIER 274 V+G+DN+E+ +S LSS+ + GYQAAKLLH ++ +++P I++ P+R+ R Sbjct: 186 VLGVDNDEILCNMSDPPLSSIVLDVKNGGYQAAKLLHSIVKDKQLPQFNIVINPIRIERR 245 Query: 275 RSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMI 334 +ST+ S++D V+ A+ I I + ++L+ + +SR LEK F++EVG +I+ I Sbjct: 246 KSTEGYSVSDKLVLGALKLIETENNGLISITEILNRLCVSRRVLEKHFRKEVGISIYQYI 305 Query: 335 HAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRD 385 + L+++ L I +I+ GY FK+ Y TP +YR+ Sbjct: 306 LDYRTSCFAEKLLTSDLPIMDIAFELGYEDYINLTKSFKRIYQMTPTQYRN 356 >UniRef50_A3ZWJ4 Xylose operon regulatory protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZWJ4_9PLAN Length = 400 Score = 144 bits (364), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 103/386 (26%), Positives = 177/386 (45%), Gaps = 8/386 (2%) Query: 1 MFTKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIE-EDFRARIDKIKDWLGDG 59 ++ R RI LL + R ++EGV + A WD ++ + + DW G+G Sbjct: 7 VYPDRLRIALLVLNESQWSRSILEGVSRF-AAEHGGWDFWLHPRAMKTQALMPADWKGEG 65 Query: 60 VIADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGV 119 +IA D+ + +L D+P + V + +P V + L + F+ ++G Sbjct: 66 IIARIADEHVRASLERHDMPTINVSWHSEQSRRFPKVIADPQGSGELAGNFFV---QRGF 122 Query: 120 NRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPE-NWQHAQNRLADWL 178 F + G P R + A +++ E Y + +P ++ + ++RL W+ Sbjct: 123 QHFGYIGPPLCYNYR--DPVQPAAERVIEEAGYSLRSFSPDPASPSSDYDYQRSRLVQWV 180 Query: 179 QTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQG 238 ++LP G+IA + AR I+ C I VP + V+ ++++ L LS + +S + Q Sbjct: 181 RSLPKPIGVIAFSTVVAREIMLTCSAEGINVPNDVAVLAVEHDPLISQLSPMPISYIQQR 240 Query: 239 ARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHA 298 +GY+AA+ L RL+ + I + P +IE+ STD D V A+ YI+ +A Sbjct: 241 PELVGYEAARELRRLISGGTPRDEPIAIAPEGIIEKPSTDTIFAADSMVQNAVAYIKQNA 300 Query: 299 CKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQ 358 I V + + +SR +LE RF++ + T I +L + L T LS+ EIS Sbjct: 301 DSAINVSDLTRFLDVSRRSLEDRFRKALNRTPAEEIRFARLLVLKDFLRQTNLSLAEISA 360 Query: 359 MCGYPSLQYFYSVFKKAYDTTPKEYR 384 G+ FK+ TP EYR Sbjct: 361 KSGFSCENSTLRFFKRMTGMTPGEYR 386 >UniRef50_A3ZSV8 Xylose operon regulatory protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZSV8_9PLAN Length = 380 Score = 144 bits (363), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 101/389 (25%), Positives = 185/389 (47%), Gaps = 27/389 (6%) Query: 8 ITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARIDKI---KDWLGDGVIADF 64 + +L + + +V G+ YL W++F+E R + + + K W GDG+IA Sbjct: 1 MGVLIETSTGWGNGMVSGIASYLDDCGESWNVFLEP--RGKFEPLHIPKGWNGDGIIARV 58 Query: 65 DDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLK---EKGVNR 121 ++ ++ + + +P V V Y E IA ES L K K + Sbjct: 59 NNAELAEEILKAGIPCVNVS-WYDYGEGT-----IARCTLDEEESGRLAAKYYLNKKYSY 112 Query: 122 FAFYGLPESSGKRWATERE----YAFRQLVAEEKYRGVVYQ--GLETAPENWQHAQNRLA 175 FA+ G P W + E A+ Q + Y Y G++ + W +L Sbjct: 113 FAYCGSP------WRPDYEDLFGRAYSQYLQTAGYTCHTYPAPGIDRQ-QPWIDQLRQLG 165 Query: 176 DWLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSV 235 WL LP G++A+ +R ++ + + VPE + V+ +++EL ++R LS + Sbjct: 166 TWLTKLPKPCGVLAIDTQTSRQLIDAAKFAELGVPETIAVLAGEHDELASGITRPKLSML 225 Query: 236 AQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIR 295 A +GY AA+LL R++ E + + + P VI ++STD+ L+D +++A+ ++R Sbjct: 226 DNAAHSVGYNAAQLLDRIMRGEANRGELVTIKPTNVISKKSTDWTVLSDERLMRALRFVR 285 Query: 296 NHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINE 355 ++ I+V + + GISR LE+ F + T I +L++A+ LL + L+++E Sbjct: 286 DNFHHPIQVADLAEQAGISRRLLEQLFDRHLEITPSKQILLVRLDEAKHLLDRSVLAMSE 345 Query: 356 ISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 I+ CG+ S + F++ +P +YR Sbjct: 346 IASRCGFDSPEVMCRAFQRELQLSPTKYR 374 >UniRef50_C3QXL3 Transcriptional regulator n=7 Tax=Bacteroides RepID=C3QXL3_9BACE Length = 381 Score = 140 bits (352), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 91/385 (23%), Positives = 184/385 (47%), Gaps = 20/385 (5%) Query: 7 RITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARIDK-------IKDWLGDG 59 +I LL + + +DR+++ G+ +Y W + + + + K+W D Sbjct: 3 KILLLIDYSSEFDRKLLRGLVQY-SKENGPWLFYRLPSYYSTMHGEQGILKWAKEWKADA 61 Query: 60 VIADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGV 119 +I +++ I+ ++++P+V + +H + +Y + D A ++ Sbjct: 62 IIGQWNNDTIDLQ-KELNIPVV-LQNYHHRSVTYSN---LTGDYKGTGRMAAQFFAKRMF 116 Query: 120 NRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQ 179 FA++G+ G W+ ER +RQ E K G + E+ + + + WLQ Sbjct: 117 RNFAYFGV---KGVVWSDERCEGYRQ---EVKRIGGEFFSFESDKQE-DEIRMEASQWLQ 169 Query: 180 TLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGA 239 LP + DA A I + C+ +IP+PE++ ++G+DN+EL +S +SS+ Sbjct: 170 QLPKPVALFCCDDAHALFISETCKMTNIPIPEEIALLGVDNDELMCNISDPPISSIELEV 229 Query: 240 RQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHAC 299 + GY +L+H+ + KE I++ P+R+ R+ST+ ++ DP +++ + YI +H Sbjct: 230 ERGGYSIGRLIHQQIKKEHEGTFNIVINPIRIELRQSTEKHNIKDPYILEVVKYIESHYS 289 Query: 300 KGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQM 359 + ++ +L + +SR N E +FK + +I+ I + LL++T + +++ Sbjct: 290 SDLTIESLLANIPLSRRNFEVKFKNALNTSIYQYILNCRCNHLADLLLTTDRPLADLAME 349 Query: 360 CGYPSLQYFYSVFKKAYDTTPKEYR 384 G+ +FKK +P EYR Sbjct: 350 VGFTDYNNIARIFKKFKGCSPIEYR 374 >UniRef50_A6DP72 Xylose operon regulatory protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DP72_9BACT Length = 375 Score = 136 bits (343), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 102/375 (27%), Positives = 188/375 (50%), Gaps = 14/375 (3%) Query: 5 RHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIE-EDFRARIDKIKDWLGDGVIAD 63 + RI L F ++ + G+ Y + +W + E +I +I DG+IA Sbjct: 3 KKRIALAFPMGSSHWEKTAYGIRSYCNQERDKWKLITNPETHDLKISEINLDAIDGIIAV 62 Query: 64 FDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRFA 123 +K L VP V + G+ L +S P + D Y + + A H E+G FA Sbjct: 63 VRNKTDLDHLKKHSVPCVNISGT--LQKSDLP--RVCPDFYQMGQLAAQHFFERGFQNFA 118 Query: 124 FYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLE-TAPENWQHAQNRLADWLQTLP 182 ++GL E+ +ER Y + E + + LE T N+ + ++L++L Sbjct: 119 YFGLSETV----FSERMY--QGFHKELSKKTKTCEKLEVTFGANFLEQDELIHEFLKSLK 172 Query: 183 PQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQM 242 I+A D RA+ +L+ CE + + VPE + ++G +N+ ++ S LSS+ + +++ Sbjct: 173 LPCAILAAHDPRAQILLEACEEMALRVPEDIAILGSNNDTVSCEFSSPPLSSIERDDQKI 232 Query: 243 GYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGI 302 G++AAK L L+ ++E +++PP++V R+ST+ + P + +A+ +I + + Sbjct: 233 GFEAAKALDMLM-RQEACQHELIIPPLKVKTRKSTEIFTPKHPEIKRALDFIEEQFDQSL 291 Query: 303 KVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLI-STTLSINEISQMCG 361 V + D +G SR LE F+EE+ ++ I +L+KA LL S+ L++++ISQ G Sbjct: 292 NVQMICDYLGRSRRWLEYAFREELQQSPKHFIDERRLKKALQLLQGSSQLNLSQISQQSG 351 Query: 362 YPSLQYFYSVFKKAY 376 + S+ +F K + Sbjct: 352 FSSVDQMNQLFIKKH 366 >UniRef50_B1ZT55 Transcriptional regulator, AraC family n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZT55_OPITP Length = 411 Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 105/375 (28%), Positives = 180/375 (48%), Gaps = 24/375 (6%) Query: 21 QVVEGVGEYLQASQSEWDIFIEEDFRARIDKIKDWLGDGVIA-DFDDKQIEQALADVDVP 79 + + G+ + +A +W + ++ F + + W G GV+A ++ L +P Sbjct: 22 ECIRGITRHARAH--DWHLVMDMLFTGALPR--GWNGSGVLALGAHQPELLAHLQASGLP 77 Query: 80 IVGVGGSYHLAESYPPVHY--IATDNYALVESAFLHLKEKGVNRFAFYGLPESSGKRWAT 137 V L + P V + D+ A+ A H E+ FA+ + R Sbjct: 78 CVV------LTDGDPIVDLPRVEPDHRAIGRLAADHFLERAHRSFAWAPFLNDAANR--- 128 Query: 138 EREYAFRQLVAEEKYRGVVYQGLET--AP---ENWQHAQNRLADWLQTLPPQTGIIAVTD 192 ER F++ +AE + T P +NW + LA L LP T I A D Sbjct: 129 ERLAGFQERLAEHGRTCRLLPPAHTRIGPYWQDNWDDYRRNLAAELLRLPRPTAIFAFND 188 Query: 193 ARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLHR 252 A +++ C+ + VPE + V+G+ N L LS V LSSV ++GY+AA LL Sbjct: 189 CTAANVIDCCQDAALAVPEDVAVLGVGNS-LVCELSPVPLSSVDDDMTELGYRAALLLES 247 Query: 253 LLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNH-ACKGIKVDQVLDAV 311 +L + + +PP ++ R S+D ++TDP V +A+HYI H + + V QV +A+ Sbjct: 248 VLSGAGTATRTLRIPPRGIVTRLSSDMAAVTDPRVARALHYIAEHYSNPMLTVCQVAEAL 307 Query: 312 GISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLL-ISTTLSINEISQMCGYPSLQYFYS 370 G+SR NLE+ F++E G TIH I A ++ +A LL + + ++++ + G + F Sbjct: 308 GMSRRNLERSFRDETGCTIHENIIAVRMREASRLLRMHPSTKTSDVAGLVGISGVGTFCR 367 Query: 371 VFKKAYDTTPKEYRD 385 F++ + +P+ +RD Sbjct: 368 TFRRHFGMSPQAHRD 382 >UniRef50_D1N410 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N410_9BACT Length = 380 Score = 120 bits (301), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 92/371 (24%), Positives = 165/371 (44%), Gaps = 24/371 (6%) Query: 21 QVVEGVGEYLQASQSEWDIFIEEDFRARIDKIKDWLGDGVIADF----DDKQIEQALADV 76 ++ +G+ +Y +A W + I R + ++ W G+G+I+ F D E+ LA Sbjct: 18 KLTQGIADYARAHN--WHLLIHRGGELR-EILRRWRGNGIISSFWNAYTDSATEEVLAAR 74 Query: 77 DVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRFAFYGLPESSGKRWA 136 + + P + D+YA+ A + G +A Y Sbjct: 75 SWDATRMVSLVPIRNPRIPCRVVREDDYAIGTLAAEYFLGTGHRNYAVYS---------D 125 Query: 137 TEREYAFRQLVAEEKYRGVVYQGLETAP-ENWQHAQNRLADWLQTLPPQTGIIAVTDARA 195 + R FR ++ R + + +P + + L WL+ LP + D A Sbjct: 126 SVRMTGFR-----DRLRRSGFACCDLSPYRAAEREEAELLGWLRELPKPCAVFCENDWDA 180 Query: 196 RHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLD 255 +L I VP++L ++G+ N+EL + V+LSSV ++G AA L +L+D Sbjct: 181 AELLNTAFWGKIAVPDELAILGVGNDELVCMAASVSLSSVDSRLYELGQLAAAELDKLID 240 Query: 256 KEEMPLQRILVPP-VRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGIS 314 E P + + P V+ERRSTD+ ++ +P +I+ + Y RNHAC+ V + S Sbjct: 241 GTEAPEGALFLKPEPLVVERRSTDFYAVENPELIRMIEYFRNHACEPFSVAEAARRFHTS 300 Query: 315 RSNLEKRFKEEVGETIHAMIHAEKLEKARSLL-ISTTLSINEISQMCGYPSLQYFYSVFK 373 S L K F + + + ++L A S L + + E+++ G+P+ +S F+ Sbjct: 301 ESALYKLFVRNLKISPKQFVLEQRLRNACSYLKMERAWPMEEVARRAGFPTACAMFSTFQ 360 Query: 374 KAYDTTPKEYR 384 K + T+P +R Sbjct: 361 KRFGTSPGNWR 371 >UniRef50_C0AAZ9 Transcriptional regulator, AraC family n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0AAZ9_9BACT Length = 409 Score = 118 bits (295), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 81/302 (26%), Positives = 146/302 (48%), Gaps = 22/302 (7%) Query: 99 IATDNYALVESAFLHLKEKGVNRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQ 158 + D+ + A HL G F F+G R++ +R FR ++ + ++ Sbjct: 107 VTQDDVGVGRLAAEHLLACGCRAFGFWG---EWASRFSEQRLTGFRDVLGKHGLGQALHV 163 Query: 159 GLETAPENWQHAQNRLADWLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGI 218 ++A E + R+ +WL LP G V D A ++ + L VP+ + V+G Sbjct: 164 NGQSAMEPATESFARMVEWLPLLPRPIGFFCVMDTMALYLQRAVTSLGWRVPDDVAVLGA 223 Query: 219 DNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDK----------EEMPLQRILVPP 268 ++E V LSSV + ++GY+AA L L+ + E+ R+ P Sbjct: 224 GDDEFWVKFENVPLSSVKLPSLKIGYEAAAFLDELIVRGRRRREAGWSEDGGQGRV---P 280 Query: 269 VRVI------ERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRF 322 VRV+ R+STD ++D AV +A+ +IR +A + + VD+++ A G++R+ L++RF Sbjct: 281 VRVLPVSEIAARQSTDTLFVSDEAVARAVRHIRANAARELYVDEIVRAAGVARTALQRRF 340 Query: 323 KEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKE 382 KE +G ++ + ++ A+ LL + L + +++ G PS VF+ +P E Sbjct: 341 KEVLGHSLMDELTRARIVLAQGLLAGSDLPMETVAERSGLPSSHRLSVVFRAETGMSPTE 400 Query: 383 YR 384 YR Sbjct: 401 YR 402 >UniRef50_Q6LUX9 Putative uncharacterized protein RB1454 n=1 Tax=Photobacterium profundum RepID=Q6LUX9_PHOPR Length = 114 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 57/94 (60%), Positives = 71/94 (75%) Query: 263 RILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRF 322 RILVPP +V ER+ TD++++ D VIQAM + R +ACKGIKVDQVL VGISRSN+E RF Sbjct: 2 RILVPPTQVFERQRTDFQAIKDTYVIQAMRFTRLNACKGIKVDQVLSYVGISRSNMEARF 61 Query: 323 KEEVGETIHAMIHAEKLEKARSLLISTTLSINEI 356 KEE G +IH IH KL++A LL +T+L I EI Sbjct: 62 KEERGHSIHPEIHNSKLKRAGCLLKTTSLPIVEI 95 >UniRef50_Q2C797 Xylose operon regulatory protein n=2 Tax=Photobacterium RepID=Q2C797_9GAMM Length = 100 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 53/98 (54%), Positives = 67/98 (68%) Query: 4 KRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARIDKIKDWLGDGVIAD 63 K +RITLLFNANKAYDRQV+EG+G YL +WD+ +EEDF K+ + DG+IAD Sbjct: 3 KNYRITLLFNANKAYDRQVIEGIGNYLDKYHCDWDLLMEEDFTYCAKKLDSMVCDGIIAD 62 Query: 64 FDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIAT 101 DD I ++ VDVPIVGVG S++ YP V Y+AT Sbjct: 63 MDDDNIRTLVSQVDVPIVGVGISFNDPNDYPKVPYVAT 100 >UniRef50_C0A5R8 Transcriptional regulators-like protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A5R8_9BACT Length = 374 Score = 114 bits (286), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 80/268 (29%), Positives = 134/268 (50%), Gaps = 6/268 (2%) Query: 123 AFYGLPESSGKRWATEREYAFR-QL----VAEEKYRGVVYQGL-ETAPENWQHAQNRLAD 176 +F GL S K +R A++ QL + ++ + + Y G E + N RL Sbjct: 104 SFLGLDLKSYKYNLRKRNAAYKAQLEALDIKQDYIKTLHYDGWGEYSAANLSILPARLKR 163 Query: 177 WLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVA 236 L +P G+ + A Q L VP+ + V+ DN+ ++RV LSSV Sbjct: 164 ALAGMPLPVGVFSPDGYAADVFEQGVMELGYRVPDDIAVLSTDNDRGICEMARVPLSSVD 223 Query: 237 QGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRN 296 ++GY+AA+LL RL+ ++ + I++PP+ + +RRST+ S DP V M YIR Sbjct: 224 VNLSKLGYEAARLLDRLMAGDKNAPREIVIPPLGIEKRRSTERTSCDDPIVTAIMEYIRE 283 Query: 297 HACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEI 356 H + I + ++ + SR+N RF++ +G +I I ++E A+SLL +T ++ + Sbjct: 284 HFMEKITAELIIHDIHASRTNAFVRFRKVMGRSIGEEIERVRIEHAQSLLTTTDYKVDAV 343 Query: 357 SQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 +++ GY + F FK TP E R Sbjct: 344 ARLSGYLNTSAFCRAFKACTGRTPTEVR 371 >UniRef50_D2R9H5 Transcriptional regulator, AraC family n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R9H5_9PLAN Length = 416 Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 95/408 (23%), Positives = 180/408 (44%), Gaps = 34/408 (8%) Query: 2 FTKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARI--DKIKDWLGDG 59 K R+ ++ + R G A++ W+ I+E + + L DG Sbjct: 1 MPKSRRVAIMLDLRWPLKRHADIFAGTQRYAAEKGWESVIDEYVAEHLLEQPKQARLYDG 60 Query: 60 VIADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGV 119 VI + + + + +P+V + + + P V + D A+ HL +G+ Sbjct: 61 VIGRIPAR-LAELQSRFPIPLVNIWFNSPVRAPLPGVFH---DAAAVGRLEAEHLLARGL 116 Query: 120 NRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPE----NWQHAQNRLA 175 +FA + + E+ AFR +V+E + +V + L P W+ + + Sbjct: 117 RQFAVL----TRKDKAQLEQAAAFRAVVSEAGFPCIV-ERLPLVPSRSYATWKKTERLID 171 Query: 176 DWLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSV 235 W+ P G+ T+ R ++Q+C +P + ++ NEE R +LSSV Sbjct: 172 SWMDHWQPPIGVSICTEVMGRLVVQLCRRRGWRIPGDVAIVAGMNEETLCTHPRPSLSSV 231 Query: 236 AQGARQMGYQAAKLLHRLLDKEEM------------PLQR-------ILVPPVRVIERRS 276 G ++GY+AA+LL +L+ ++ + P R +++PP +I R S Sbjct: 232 EIGYERIGYEAARLLDQLMHQQSLRSRSKKRLSHLQPSARKPSQPPHLILPPQGMIVRES 291 Query: 277 TDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHA 336 TD+ ++ D + QA+ +I +H+ I D V +++ + L++RF++ + I I Sbjct: 292 TDFYAVEDKLIAQALEFIASHSHLPINCDTVAESLHVHTRTLQRRFRQVLDRPIADEIRR 351 Query: 337 EKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 + E+A+ LI + S+ EI++ G+ Y VF + TP YR Sbjct: 352 VRTERAKRELIQSDRSLTEIARDVGFSDRMQLYEVFCREVGVTPSHYR 399 >UniRef50_UPI0001745892 xylose operon regulatory protein n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001745892 Length = 394 Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 99/393 (25%), Positives = 172/393 (43%), Gaps = 28/393 (7%) Query: 12 FNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARIDKI---KDWLGDGVIADFDDKQ 68 F + + R V +G+ +++QA + W I D + + W GDG+I Q Sbjct: 5 FPSWITFQRGVFDGILKFMQAHEP-WVIEAPMDSGGELAPVVIGPRWHGDGLIVFRYTPQ 63 Query: 69 IEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRFAFYGLP 128 A +P+V + + L +P I DN +A HL G+ FA+ G Sbjct: 64 EATAWRKAGIPVVNLS-TERLGGVFP---SIVPDNEGGGAAAAKHLLTLGLRHFAYVGRA 119 Query: 129 E----------SSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPEN---WQHAQNRLA 175 +R++ ERE FR+ + E + +++Q + T N W+ + Sbjct: 120 TPFVDDGLTGLGVARRYSQEREAGFRKTLEEAGFTPLLFQ-VSTRRNNGPVWEELHETYS 178 Query: 176 DWLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSV 235 LQ LP G+ A D A +LQ + VP+ + ++G +++ + LSSV Sbjct: 179 GLLQALPRPCGVFAADDMLAHGLLQAAQSSGARVPQDVALVGFNDQSHFCQAATPPLSSV 238 Query: 236 AQGARQMGYQAAKLLHRLLDKEEMP---LQRILVPPVRVIERRSTDYRSLTDPAVIQAMH 292 +G +AA+ ++ L+ P +QR+ V V + R ST+ S+ DP V A+ Sbjct: 239 TYPGEAIGLRAAEAIYALMQGLPAPGGHIQRVPVSGVTI--RESTNVLSIRDPLVASAVR 296 Query: 293 YIRNH-ACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTL 351 IR A +V ++ D +G+S S L +RF E +G + + +L+ R L +T L Sbjct: 297 LIRKQAAATAPRVGEIADQLGVSASLLRQRFLEALGISPKEEVDRARLDIIRHWLTTTKL 356 Query: 352 SINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 +I+ G+ F++ T ++YR Sbjct: 357 GPGDIAAKTGFLDAAELRRFFRRGTGQTLQDYR 389 >UniRef50_C0ACC5 Transcriptional regulators-like protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0ACC5_9BACT Length = 397 Score = 111 bits (278), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 65/199 (32%), Positives = 103/199 (51%) Query: 186 GIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQ 245 + A D A +Q L +P+ + V+G++N RV +SS+ ++GY+ Sbjct: 191 AVYAPDDMYAEAFIQTALDLGYRIPQDIAVLGVNNSRDICEECRVPISSIDVNFSRLGYE 250 Query: 246 AAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVD 305 A+LL L+ + QRI++PP+ + +R+STD + TD V+ YIR H + I ++ Sbjct: 251 GARLLDGLMRGDIRKFQRIVIPPLTIEKRQSTDSAAETDKTVVAIQQYIREHFAERITIE 310 Query: 306 QVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSL 365 VL + ISRS RF VG I I ++ AR LL ST I+ +++MCGY Sbjct: 311 TVLRDLHISRSMAFVRFTRAVGHPIGREIINVRISHARHLLTSTDYKIDVVARMCGYEDT 370 Query: 366 QYFYSVFKKAYDTTPKEYR 384 F +FK+ + +P YR Sbjct: 371 SAFGRLFKQLHQQSPAAYR 389 >UniRef50_C0A5A7 AraC-type DNA-binding domain-containing protein-like protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A5A7_9BACT Length = 388 Score = 111 bits (277), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 62/200 (31%), Positives = 108/200 (54%), Gaps = 1/200 (0%) Query: 186 GIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQ 245 G+ + D A +Q+ L VP ++ V+G++N+ + RV LSS+ ++GY Sbjct: 184 GVFSPDDMMADSFMQIALGLGYSVPAQIAVLGMNNDRGFCEMCRVPLSSLDVNLSRLGYD 243 Query: 246 AAKLLHRLLDKE-EMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKV 304 A+LL RL+ + + PL R++VPP+ V R+STD+ D V+ + YIR+H + + V Sbjct: 244 GARLLDRLMRGQIQEPLPRVIVPPLTVETRQSTDHTRCDDRLVVAILEYIRDHFAEHMTV 303 Query: 305 DQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPS 364 + +L + SR+ +RF++ +G I I ++ AR LL+ + I+ +++M GY + Sbjct: 304 EDMLRDLHTSRAVAYERFQKHIGHPIGEEIERVRMNYARGLLVGSDYKIDVVARMSGYQN 363 Query: 365 LQYFYSVFKKAYDTTPKEYR 384 F FK + TP R Sbjct: 364 TASFGRAFKTRFGETPNAAR 383 >UniRef50_Q6LUY4 Putative uncharacterized protein n=1 Tax=Photobacterium profundum RepID=Q6LUY4_PHOPR Length = 367 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 92/370 (24%), Positives = 158/370 (42%), Gaps = 27/370 (7%) Query: 18 YDRQVVEGVGEYLQASQSEWDIFIEEDFRARIDKIKDWLGDGVIADFDDKQIEQALADVD 77 +DRQV++G+ L + + +E + W D VIAD+D +Q + Sbjct: 8 FDRQVLKGIKAKLDEANVNVSLHLESGTLLEELTREHW--DYVIADYDKPHFQQIVQTCG 65 Query: 78 VPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRFAFYGLPESSGKRWAT 137 V V ++ + + + DN L +A + FY + + + W Sbjct: 66 AKSV-VYSNHQRDDFSEKMSSVVMDNTCLASAALRRFLDAKYTHVGFYTNEQDALQPWGQ 124 Query: 138 EREYAFRQLVAEEKYRGV--VYQGLETAPENWQHAQNRLADWLQTLPPQTGIIAVTDARA 195 ERE AF+ L + V V+Q + + P G+ +D A Sbjct: 125 EREEAFQLLTMQAGIHFVHDVHQAMAA----------------RQFP--FGVYCSSDRSA 166 Query: 196 RHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMG-YQAAKLLHRLL 254 R + Q C+ I VP+ + +IG D+++ R LS + LSS+ ++G + L+ + Sbjct: 167 RKLAQYCQCNAIAVPKDVAIIGTDSDDTERMLSPLPLSSLDVNPYELGRFCVETLIKTIR 226 Query: 255 DKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGIS 314 K + R+ P + E +T + + D V +A +IRN+ I + QV D S Sbjct: 227 FKRTL---RLRYAPETLYEAATTTHCNHVDDIVSRATLFIRNNFHLNINIKQVTDYCRTS 283 Query: 315 RSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKK 374 R L+ RF G T H + ++ +A+ LL + ++ I+ CGYP+ Y VF K Sbjct: 284 RKTLDTRFLAAQGITAHQYLTEVRVARAKYLLAHSQNKLDSIALQCGYPNQSYLTQVFGK 343 Query: 375 AYDTTPKEYR 384 +P +YR Sbjct: 344 QLGVSPSQYR 353 >UniRef50_B5JIL8 Transcriptional regulator, AraC family protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JIL8_9BACT Length = 455 Score = 108 bits (269), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 103/396 (26%), Positives = 177/396 (44%), Gaps = 40/396 (10%) Query: 7 RITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARIDKIKDWLGDGVI----- 61 R T ++ +++ ++G+ Y A + W + D + WLG GVI Sbjct: 79 RQTKIWVSSQTAQPSFLQGIIRY--AKKQSWQL--TTDLLQSGNVSGSWLGHGVIKYLPV 134 Query: 62 ADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNR 121 FD Q + D+P V + L++ + DN+A+ A HL + Sbjct: 135 PTFDS----QTPSSTDLPCV----TASLSDQPTTGLRVQADNFAIGRQAAEHLINRNCRN 186 Query: 122 FAF--YGLPESSGKRWAT------EREYAFRQLVAEEKYRGVVYQGLETAPEN--WQHAQ 171 FA+ Y +++ R+ +R ++ RQL ++ ++ E W+ A Sbjct: 187 FAWLPYAHDKTNQIRYMGFLSHLRDRGFSCRQLAPP-----LLDTSVDPCRERILWRQAM 241 Query: 172 NRLADWLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVA 231 +Q L +TG+ A +D+ A + ++ VPE L ++GI N+ + ++ Sbjct: 242 ------IQPLEGRTGLFASSDSLAIEVAELVGETGTRVPEDLAILGIGNQTAECESAPIS 295 Query: 232 LSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAM 291 LSS+ ++G+QAAKLL L E I V P V R ST +L + V QA+ Sbjct: 296 LSSIDPNLEELGFQAAKLLDAALKSETNANSCIHVSPTGVEARDSTAISNLENQRVAQAL 355 Query: 292 HYIRNH-ACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLIS-T 349 +I NH + V V +++ ISR LE+ F+ E G TI I ++ +A LL Sbjct: 356 VFISNHYPDPRLGVCSVAESLNISRRQLERDFRNEKGCTIREFIEHTRMNEASRLLSERP 415 Query: 350 TLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRD 385 L+++ I+ G + F+ +F+K + TP YR+ Sbjct: 416 ALTVSAIADQVGISAQGNFFRIFRKHFGLTPSAYRE 451 >UniRef50_D1N888 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N888_9BACT Length = 379 Score = 102 bits (253), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 82/353 (23%), Positives = 156/353 (44%), Gaps = 38/353 (10%) Query: 53 KDWLGDGVIADFDDKQIEQALADVD-VPIVGVGGSYHLAESYPP---VHYIATDNYALVE 108 + W GDGVI+D+ + AL D+ +P+V + PP V + +D A+ Sbjct: 43 QSWQGDGVISDYLTLEELAALRDIGKIPVV--------SRILPPGGNVRSVLSDTRAVAR 94 Query: 109 SAFLHLKEKGVNRFA----------FYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQ 158 A +G FA G+P S G R L+ + RG+ Y Sbjct: 95 VAVDFFAGQGFRVFASVSARDFPGEVCGIPVSPG-----------RALLELTRERGLEYH 143 Query: 159 G-----LETAPENWQHAQNRLADWLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKL 213 +E P + + ++L+ LP + + + + E L + VPE++ Sbjct: 144 AHYCAPVEGNPPAYPEMVAGIREFLRNLPKPAALTLTSVWVVAPVWRAVEELELRVPEEI 203 Query: 214 CVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIE 273 ++ L + V LS ++ +G + A+ + ++LD +++PL+ +V P VI Sbjct: 204 AILCNSQRPLYTCYTPVPLSGISGEHGTVGLKLAETMQKMLDGDDVPLEPEVVSPSAVIR 263 Query: 274 RRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAM 333 R STD ++ + A+ ++ + + + + G+S+S L + F+ +G T Sbjct: 264 RASTDIIAVPHLKLATAIRFLIQNCGTSVGIGEAARYAGLSQSMLNRLFRRYLGRTAAGF 323 Query: 334 IHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDV 386 + ++++ ++LL ST LS++EI+ GY S F++A P YR++ Sbjct: 324 LQQLRIDRMKNLLDSTGLSLSEIAAQTGYSSPVSLSLAFRRATGMQPGAYREL 376 >UniRef50_C0AC48 Transcriptional regulators-like protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0AC48_9BACT Length = 371 Score = 97.8 bits (242), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 48/203 (23%), Positives = 106/203 (52%) Query: 182 PPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQ 241 P ++A +D A ++Q+ + +PE + ++GIDN+ L + + LSS+ G+ + Sbjct: 164 PKPCALLAFSDTLAGLVMQLALDEGLRLPEHVALLGIDNDMLLQRALPLGLSSIEIGSEK 223 Query: 242 MGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKG 301 G +AA+++ + P LV R++ R++TD D + QA+ +I H Sbjct: 224 TGKKAAEVVLNWIRDGTAPAAETLVRHARLVPRQTTDRHYTEDDFIAQALDFIHEHKTSA 283 Query: 302 IKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCG 361 V ++ +G +R +E+RF+ +G + H ++ +LE+ ++ L+ + + ++ CG Sbjct: 284 PTVTEIAAHMGCTRRTVERRFRAALGNSAHQVMQELRLERTQAYLLESQAPLKAVALACG 343 Query: 362 YPSLQYFYSVFKKAYDTTPKEYR 384 + + ++ + F++ + TP +R Sbjct: 344 FSNDRHLCTAFRQRFGMTPGGFR 366 >UniRef50_A6DPD5 Xylose operon regulatory protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DPD5_9BACT Length = 376 Score = 91.7 bits (226), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 88/374 (23%), Positives = 161/374 (43%), Gaps = 24/374 (6%) Query: 18 YDRQVVEGVGEYLQASQSEWDI-FIEEDFRARIDKIKDWLGDGVIADFDDKQIEQALADV 76 YD ++ +GV A ++ W + F++ FR+ W GDG I + Q Sbjct: 14 YDYRIHQGVVNV--ARENGWSLLFLQNSFRSSAVPAA-WRGDGAITLIHSAETYQFFQTH 70 Query: 77 DVPIVGVGGSYH-LAESYPPVHYIATDNYALVESAFLHLKEKGVNRFAFYGLPESSGKRW 135 +P+V +G + H LA + + TDN L A H E+G F Y L ++ + + Sbjct: 71 KIPVVDLGLNKHGLA-----IPRVVTDNVELGRMAAEHFLERGFTHF--YALSTNNIQMF 123 Query: 136 ATEREYAFRQLVAEEKYRGVVYQGLETAPENWQH-----AQNRLADWLQTLPPQTGIIAV 190 ER AF++ + ++ Y + + P + +Q L L + A Sbjct: 124 -QERYQAFKETLMKKGYDCEIIE----VPNLYDTHLLDLSQAILKQKLSKFKNPAALFAY 178 Query: 191 TDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLL 250 D+ A + + E + + VP L ++G DN L LSSV +G QAA +L Sbjct: 179 EDSWAAQWIYLAESMGLKVPNDLAILGADNNPLIARSLSTPLSSVETNQEGLGQQAALVL 238 Query: 251 HRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDA 310 L++ + + + P V+ R STD + ++P + A+ + N I +V Sbjct: 239 KDLMEGKGIGDHLYKLQPTSVVTRASTDVIASSNPVIRTALEIMNNDIS--ITAAEVAQQ 296 Query: 311 VGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYS 370 + +++ L++ F+ + ++ ++ ++ L+ T S+ EI+ G+ S Y Sbjct: 297 MDMTQQGLQRAFRTHFHLSPGQILRKLRIRFIKNALVHTDKSMEEIAFEAGFTSTPSLYL 356 Query: 371 VFKKAYDTTPKEYR 384 FK+ TP Y+ Sbjct: 357 FFKREAGETPGNYK 370 >UniRef50_D1N1K4 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N1K4_9BACT Length = 388 Score = 87.8 bits (216), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 53/215 (24%), Positives = 104/215 (48%), Gaps = 6/215 (2%) Query: 173 RLADWLQTLPPQTGIIAVTDARARHIL---QVCEHLHIPVPEKLCVIGIDNEELTRYLSR 229 RLA++ +P +A+ RH+ +V L I VPE+ V+ +E + Sbjct: 161 RLAEFFSEMPRP---LALFIPNGRHLTVAYRVIHQLGIRVPEEFAVLCNTDEPFFTENAS 217 Query: 230 VALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQ 289 + + ++ ++G +A+LL R+++ E +P + VPP ++ RSTD ++++P + Sbjct: 218 IPTTHISGEPLKLGRMSAELLERMMNAETVPEAPVWVPPASIVSSRSTDVLAISNPKLAA 277 Query: 290 AMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLIST 349 A+ + + I V+ A G+S S L + F++ + ++ + + + R L + Sbjct: 278 AVDFFLGNFMNFISVEDAAAAAGLSPSMLVRLFRKHLRKSPSEFLRGLRFNRIRHFLDKS 337 Query: 350 TLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 L + EI++ GY S F++ Y P EYR Sbjct: 338 DLPLPEIARRTGYGSAMSLSIAFRREYGIAPGEYR 372 >UniRef50_UPI000174567C xylose operon regulatory protein n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI000174567C Length = 419 Score = 80.9 bits (198), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 90/391 (23%), Positives = 175/391 (44%), Gaps = 17/391 (4%) Query: 3 TKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEE-DFRARIDKIKDWLGDGVI 61 T +H+ ++F A YD + +G+ ++++ +++W++ + R +K DG++ Sbjct: 30 TLKHK-PVIFMALSFYDASLHDGIAQWVR--ENDWELDVSNFPVLMRPPTVK---CDGIL 83 Query: 62 ADFDDKQIEQALADVDVPIVG--VGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGV 119 + + L D P+V + + L E+ + ++ D + HL G Sbjct: 84 TTITRPETLEWLKPYDCPMVRMLIAPTPELEEASGHIPLVSADYESAGRLGAKHLLTLGQ 143 Query: 120 NRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVV-YQGLETAPENWQH---AQNR-- 173 FAFY G R+ L A K V+ + G + + A R Sbjct: 144 PHFAFYQ--RGVGPDVLAIRDGFVETLKAAGKQVTVLNFMGDHPNLDPFTRVPRADRREW 201 Query: 174 LADWLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALS 233 LA ++ LP I+A D A ++ + + +P + ++G D+ L +S V++S Sbjct: 202 LARRIRALPKPLAIMAEDDRFAIEVMHAVRAMGLRIPTDVAILGCDDNRLALSVSPVSMS 261 Query: 234 SVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHY 293 SV R +GY AA +L L+ +E P + I +P RV+ R ST + + V +A+ + Sbjct: 262 SVDTNLRGVGYAAASILAGLIQGKEKPSRPIRIPSRRVLARESTATYAGSHQGVSEALRF 321 Query: 294 IRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSI 353 +R H + ++ +V +S L+ ++E T++ I ++ A +L T L + Sbjct: 322 VRQHFREPLQASRVAKHARMSLRGLQSALRQEAQLTLNDEIARLRVTAASEMLEETDLKL 381 Query: 354 NEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 + I+ G + VF++ Y TP+++R Sbjct: 382 DSIAADVGLRDAKNLCRVFRQRYGMTPQQWR 412 >UniRef50_A4FN08 LacI-type transcriptional regulator n=2 Tax=Actinomycetales RepID=A4FN08_SACEN Length = 335 Score = 80.9 bits (198), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 74/239 (30%), Positives = 114/239 (47%), Gaps = 34/239 (14%) Query: 25 GVGEYLQASQSEWDIFIEE--DFRARIDKIKDWLG--------DGVIA---DFDDKQIEQ 71 G+G L+ Q++ D+ + + D R ++++LG D VIA D D+++I Sbjct: 77 GIGTRLR--QADLDMLVYQVGDMRG----VEEYLGELPLRRNVDAVIALSLDLDEREI-A 129 Query: 72 ALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRFAFYGLPESS 131 L +V VP+V +++ P + DN A SA HL G AF +S+ Sbjct: 130 VLDEVGVPVV------FVSQRIPERASVFIDNAAAARSATRHLLNLGHTSIAFVQSADST 183 Query: 132 GKRWAT-EREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQTLPPQTGIIAV 190 G W++ ER +R+ +AE R V G E+ P A L L P T I A Sbjct: 184 GFEWSSAERVNGYREAMAEAGVRPQVLVG-ESGPRGGALAAGEL---LSRAEPPTAIFAE 239 Query: 191 TDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKL 249 +D A +L+V + + VPE + V+G DN ++ L LS+VAQ +MG AA+L Sbjct: 240 SDDVAMGVLRVLQRSGLAVPEVMSVLGFDNHDMAELLD---LSTVAQPVSEMGAVAARL 295 >UniRef50_A8SWS2 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SWS2_9FIRM Length = 253 Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 47/158 (29%), Positives = 80/158 (50%), Gaps = 5/158 (3%) Query: 235 VAQGARQM-GYQAAKLLHRLLDKEEMPLQRILVPPVRVIE----RRSTDYRSLTDPAVIQ 289 + +G +M Y + LDK + Q I V +++ + ++ P ++ Sbjct: 86 IEEGMEEMESYNLSDFYINKLDKAQTKQQIINVHNQLIMDYARRMKRVKKKAAISPHCVR 145 Query: 290 AMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLIST 349 AM Y+ +H + I++ + + VG+ RS L K F +EVG+TI I +KL+ AR++L+ + Sbjct: 146 AMDYVYDHLNERIEITGIAEFVGVERSYLSKLFHKEVGQTISDYIMEKKLQTARNMLLYS 205 Query: 350 TLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVN 387 S EISQ + S YF F+ + +TP YR N Sbjct: 206 DFSCTEISQYLAFASNSYFTKCFRNRFGSTPSAYRRTN 243 >UniRef50_C4G2K3 Putative uncharacterized protein n=2 Tax=Firmicutes RepID=C4G2K3_ABIDE Length = 402 Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 40/99 (40%), Positives = 61/99 (61%) Query: 287 VIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLL 346 + Q + YI H + ++V+ V D +G SRS + ++F+ E+G I A I KLE+A++LL Sbjct: 301 IFQCIQYISKHTNEPLRVNDVADYIGKSRSYITRKFQTELGFGISAFIMKCKLEEAKNLL 360 Query: 347 ISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRD 385 T S++EIS + S YF +VFKK Y TP +YR+ Sbjct: 361 SFTNKSLSEISNYLCFSSQAYFQNVFKKNYGITPLQYRE 399 >UniRef50_C3BQM4 Two component transcriptional regulator, AraC n=4 Tax=Bacillus RepID=C3BQM4_9BACI Length = 383 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 38/100 (38%), Positives = 60/100 (60%) Query: 286 AVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSL 345 + +A+ Y NH + I V +V + VG+SRS+ FK+ +GE+ H+ KLE A + Sbjct: 274 TIKEAILYTMNHLSEPIVVSEVAEMVGLSRSHFSMLFKKIIGESFHSFTERRKLELAMQM 333 Query: 346 LISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRD 385 L +T+L+I E+++ G + +YF FKK TTP EYR+ Sbjct: 334 LQTTSLTIQEVAEHIGISNSKYFSKWFKKCTGTTPSEYRE 373 >UniRef50_D1PII7 Transcriptional regulator, AraC family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PII7_9FIRM Length = 406 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 41/122 (33%), Positives = 66/122 (54%), Gaps = 3/122 (2%) Query: 271 VIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETI 330 +++R ST + T+P V AM Y+R H + + + V A+ + S RFK+E G T+ Sbjct: 288 LVQRHST--QGYTEP-VQTAMLYVRQHLAEPLSLRTVAGALDCNASYFSARFKKETGHTL 344 Query: 331 HAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSEV 390 I E++ A SLL+ST L + I+Q CG+ + YF +F++ +P EYR + Sbjct: 345 TGFILQERMRLAISLLLSTRLQVQTIAQHCGFLDVNYFSRIFRQTTGCSPSEYRKTGRAL 404 Query: 391 ML 392 L Sbjct: 405 QL 406 >UniRef50_C6JEQ5 Transcriptional regulator n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEQ5_9FIRM Length = 301 Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 39/112 (34%), Positives = 62/112 (55%) Query: 273 ERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHA 332 +++ Y T V A+ YI++ KGI + + D +GISR+ L F++E+G + Sbjct: 172 NKKNAKYAYSTSVYVELAIEYIKDMYQKGIGISDIADNIGISRAYLNSSFQKELGMSAQT 231 Query: 333 MIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 + K+ KA SLL+ST+LS+ EI+ GY F FKK + +PK Y+ Sbjct: 232 FLIDYKMHKAASLLVSTSLSVKEIANNVGYEDQLVFSKAFKKKFGMSPKNYK 283 >UniRef50_Q848L6 TrrA n=1 Tax=uncultured bacterium RepID=Q848L6_9BACT Length = 399 Score = 75.1 bits (183), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 39/98 (39%), Positives = 59/98 (60%) Query: 287 VIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLL 346 + + +I +H + I VD V+ +G SR+ L KRFK+E+G I I +LE+A+SLL Sbjct: 295 IFDCIQFITSHINEPIHVDDVVANIGRSRTYLTKRFKDELGFDISNFIMRCRLEEAKSLL 354 Query: 347 ISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 + S++EIS + + YF +VFKK Y TP +YR Sbjct: 355 TFSDKSLSEISNYLCFSTQAYFQNVFKKKYGVTPNQYR 392 >UniRef50_C7GI55 Transcriptional regulator, AraC family n=2 Tax=Lachnospiraceae RepID=C7GI55_9FIRM Length = 400 Score = 74.7 bits (182), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 44/101 (43%), Positives = 56/101 (55%) Query: 284 DPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKAR 343 P V Q M YIRNH + I V+ G S S + K FK E+G + A I KLE+A+ Sbjct: 292 SPDVYQCMTYIRNHTNEPISVEAAAAHTGRSASYMMKHFKGELGIRMGAYIMRCKLEEAK 351 Query: 344 SLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 SLL + S+ EIS + S YF +VFKK Y TP +YR Sbjct: 352 SLLTYSEKSLAEISSYLCFSSQSYFQNVFKKQYGVTPLQYR 392 >UniRef50_C6J2H9 Response regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J2H9_9BACL Length = 535 Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 45/137 (32%), Positives = 71/137 (51%), Gaps = 2/137 (1%) Query: 256 KEEMPLQRILVPPVRVIE--RRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGI 313 +E M L+ +L V +IE R S + T+ ++ A +YI+NH + ++ + D +GI Sbjct: 398 REPMSLKELLSIIVSLIEHARSSLSAKKSTELLMMSAQNYIQNHLGRDFGIEDIADYLGI 457 Query: 314 SRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFK 373 S S FK GET + +++E A+ LL ++ SI +I GY +YF VF+ Sbjct: 458 SSSYFCLLFKNHFGETFVEYLTKQRMEMAKCLLRTSERSIAQIGSSIGYQERRYFTKVFQ 517 Query: 374 KAYDTTPKEYRDVNSEV 390 K TP +YR S V Sbjct: 518 KYTGMTPSDYRQKESNV 534 >UniRef50_D1N9G4 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N9G4_9BACT Length = 261 Score = 73.9 bits (180), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 37/100 (37%), Positives = 57/100 (57%) Query: 285 PAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARS 344 PA +AM Y+ + + I V +V +A G+S S+L F+ E E+ A ++ ++ +AR Sbjct: 144 PAAARAMAYLEENYNRNISVAEVANACGVSPSHLHLLFRREFSESPLASLNRIRMNRARQ 203 Query: 345 LLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 LL++ LSI EI CG+ YF F+K + TP EYR Sbjct: 204 LLLNCYLSIGEIGFQCGFNQPHYFCRAFRKIHGCTPGEYR 243 >UniRef50_A9U7M3 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U7M3_PHYPA Length = 385 Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 33/100 (33%), Positives = 63/100 (63%) Query: 285 PAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARS 344 P + A+ YIR H + ++++ + AV +S S+L ++FK+E G+ + + I++ ++ +A Sbjct: 273 PVIRTAIEYIRLHLAEPLRLEAIATAVHVSPSDLSRQFKKETGQPLTSYINSLRIREALQ 332 Query: 345 LLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 ++ S +SI +I+QM G+ + YF VFK+ TP +YR Sbjct: 333 IIRSEPISITDIAQMVGFSDVNYFTKVFKQLQGVTPSDYR 372 >UniRef50_A6B487 Arabinose operon regulatory protein n=3 Tax=Vibrionaceae RepID=A6B487_VIBPA Length = 279 Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 35/102 (34%), Positives = 59/102 (57%) Query: 284 DPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKAR 343 DP VI+AM+Y+ + + ++ + D +S S L F++EVG TI +++ +A+ Sbjct: 175 DPRVIEAMNYMTQNLNQNFTLEDIADFTCLSASRLGHLFRDEVGMTITQWRDDQRISRAK 234 Query: 344 SLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRD 385 LL++T S+N I ++ GY YF VFK+ +PK YR+ Sbjct: 235 QLLVTTNYSVNHIGRIVGYTDPLYFSRVFKRKAGASPKLYRE 276 >UniRef50_C4FXH3 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FXH3_9FIRM Length = 298 Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 35/107 (32%), Positives = 68/107 (63%) Query: 286 AVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSL 345 +V A HYI NH K I ++Q+ + +SR +L +FKEE+G + ++ +L +A+ L Sbjct: 173 SVSLAKHYIDNHFSKNINLEQLEERAHVSRFHLAHQFKEELGLSPINYLNQVRLTQAQEL 232 Query: 346 LISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSEVML 392 L++T ++ +I++M G+ S+ YF + F +A TP+ YR++++ ++ Sbjct: 233 LLTTNYTVLQITEMVGFNSVSYFSNKFHEAVGMTPRAYRNLHASSLI 279 >UniRef50_C6D447 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D447_PAESJ Length = 292 Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 39/100 (39%), Positives = 51/100 (51%) Query: 287 VIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLL 346 V Q+M YIR HA +GI V Q A G++R+ F E+VG I ++E A+ LL Sbjct: 188 VKQSMSYIRQHATEGITVQQAAKAAGMNRTYYSVAFSEKVGMPPSEFITQVRMESAKRLL 247 Query: 347 ISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDV 386 T SI E++ GY SL F FK TP YR+ Sbjct: 248 AETDASITEVAYTTGYSSLYAFTRTFKNRMGETPTAYREA 287 >UniRef50_Q8ES65 Hypothetical conserved protein n=1 Tax=Oceanobacillus iheyensis RepID=Q8ES65_OCEIH Length = 517 Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 59/105 (56%) Query: 284 DPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKAR 343 D + QA YI + IKV +V D + +S + FK++ GE + ++ ++E+A+ Sbjct: 411 DWLIKQAERYINEYFRTTIKVQEVADVINVSSNYFSTLFKQKTGENFNEYVNKLRVEEAK 470 Query: 344 SLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNS 388 SLLI+T ++EIS G+ +YF SVFKK TP YR + + Sbjct: 471 SLLINTPFKVSEISIQVGFQEYKYFVSVFKKFSGLTPTNYRKLTA 515 >UniRef50_B1KF96 Transcriptional regulator, AraC family n=2 Tax=Alteromonadales RepID=B1KF96_SHEWM Length = 234 Score = 71.6 bits (174), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 31/101 (30%), Positives = 61/101 (60%) Query: 288 IQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLI 347 I+ Y+++H I ++ + +G +R+ L F + G T+ + I E+++ A +LL Sbjct: 124 IRTAEYLKSHIANEISLNTLTKEIGTNRNKLSSAFNQTYGMTVFSWIRKERMQYAANLLK 183 Query: 348 STTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNS 388 +T+L+I ++S+ GYP F + F++A++ +P+EYR NS Sbjct: 184 NTSLTILQVSESVGYPDSNNFSTAFRRAFNQSPREYRANNS 224 >UniRef50_D1PSQ0 AraC-type sugar metabolism regulator n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSQ0_9FIRM Length = 275 Score = 71.6 bits (174), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 64/226 (28%), Positives = 105/226 (46%), Gaps = 21/226 (9%) Query: 173 RLADWLQTLP---PQTGIIAVTDARARHILQVC----EHLHIPVPEKLCVIGIDNEELTR 225 R DW+ T P Q I+ DA R +L + EHL P + + + + Sbjct: 49 RPGDWMLTSPLELHQARIVTDVDAYERFVLWIARPYLEHLSTP---RTSLTRCFDTSVAN 105 Query: 226 YLSRVALSSVAQGARQMGYQAAKLLHRLLDKE---EMPLQRILVPPVRVIERRST---DY 279 + + + L A GA QM +L KE ++ Q LV + + R + D Sbjct: 106 HTNLLRLPGAA-GA-QMRASIDRLCTLRTSKEYGSDLLAQGALVDLMIGLNRAAAERGDA 163 Query: 280 RSL--TDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAE 337 R + +D V +HYI H + + +DQ+ + IS+ +L ++F +VG T+H I + Sbjct: 164 RPMGSSDQVVDAVLHYINEHYSETLTLDQLAEKFFISKYHLLRKFDAQVGTTVHRYILQK 223 Query: 338 KLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEY 383 +L A+ LL + + NE+ Q CG+ FY FK Y+ TP++Y Sbjct: 224 RLLNAKQLL-AGGVPPNEVCQYCGFGDYANFYRAFKAEYNQTPRQY 268 >UniRef50_C6CRZ9 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CRZ9_PAESJ Length = 501 Score = 71.2 bits (173), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 42/130 (32%), Positives = 68/130 (52%), Gaps = 4/130 (3%) Query: 259 MPLQRILVPPVRVIERRSTDYRSLTDP---AVIQAMHYIRNHACKG-IKVDQVLDAVGIS 314 M L+ + E R ++ +P ++ QA+ YI H + + QV + + ++ Sbjct: 369 MELKSWFKAACQDFETRLDRWKQQANPYVNSIQQAIDYIEEHYLDSDLSIKQVAENIHLN 428 Query: 315 RSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKK 374 S L FK+E GET ++ KL+KA+ LL +T + I+EI Q G+ YF SVFKK Sbjct: 429 PSYLSTLFKKETGETFTGYVNKLKLQKAQVLLRNTDMKISEICQTVGFEDSTYFSSVFKK 488 Query: 375 AYDTTPKEYR 384 + +P E+R Sbjct: 489 HFQISPSEFR 498 >UniRef50_C7IHL5 Transcriptional regulator, AraC family n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IHL5_9CLOT Length = 287 Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 41/125 (32%), Positives = 69/125 (55%), Gaps = 3/125 (2%) Query: 261 LQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEK 320 L R L+ +R IE + S P V A+ +I + I ++++ +G++ S+L + Sbjct: 159 LYRFLIALLRNIEFPTARKAS---PHVAAAIEWINRNYSNQINLEEMCPEIGVTYSHLTR 215 Query: 321 RFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTP 380 +F +E G + + +LE LL++T LSI +I++ CG+ YF V+KKA TTP Sbjct: 216 QFCKEKGISPVQYLTNLRLEHGMQLLLNTNLSIQKIAEACGFSCANYFTKVYKKAMHTTP 275 Query: 381 KEYRD 385 EYR+ Sbjct: 276 VEYRN 280 >UniRef50_A4ITD0 Sugar ABC transporter (Permease) n=3 Tax=Bacillaceae RepID=A4ITD0_GEOTN Length = 366 Score = 70.9 bits (172), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 37/118 (31%), Positives = 64/118 (54%) Query: 269 VRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGE 328 V +IE+ D+ D + +A+ YIR + IK +V + V IS + F+++ G+ Sbjct: 242 VTIIEKLGLDHEETNDWLIERALEYIRQFYREPIKASEVANVVNISANYFSTIFRQKTGK 301 Query: 329 TIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDV 386 T + ++ ++ +AR LL T+L + I+ G+ +YF VFKK TP EYR++ Sbjct: 302 TFNEYVNLLRVNEARKLLSETSLRVGVIANNVGFHEYKYFVEVFKKFTGMTPTEYRNL 359 >UniRef50_C9BEC9 Transcriptional regulator n=2 Tax=Enterococcus faecium RepID=C9BEC9_ENTFC Length = 381 Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 35/99 (35%), Positives = 59/99 (59%) Query: 287 VIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLL 346 V Q ++YI +H + +D++ + +++L FK+E+G+TIH+ I K+ +++ LL Sbjct: 275 VKQLINYIDSHIYDRVTLDELAETFDKHKTHLSALFKKEMGQTIHSYIQERKINESKHLL 334 Query: 347 ISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRD 385 + T S EIS + + S +F VFKK TP+EYRD Sbjct: 335 LFTDKSYKEISVLLSFASQSHFIQVFKKTTSLTPREYRD 373 >UniRef50_C0Z9S9 Probable two-component response regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z9S9_BREBN Length = 397 Score = 70.5 bits (171), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 38/114 (33%), Positives = 61/114 (53%), Gaps = 3/114 (2%) Query: 274 RRSTDYRSLTDP---AVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETI 330 +R+ Y + DP + QA+HY + + V +V VG+SRS+ FK+ VGE+ Sbjct: 266 QRARKYGVIQDPWQEPIKQAVHYALDRLDTPLTVSEVASQVGLSRSHFSVMFKKGVGESF 325 Query: 331 HAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 + +++ A+++L T LSI E+++ G P +YF FKK TP YR Sbjct: 326 GEFLDKRRVKMAQAMLNETALSIQEVAERVGLPDPKYFSKWFKKYTGMTPSHYR 379 >UniRef50_C8N9B6 AraC family transcriptional regulator n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N9B6_9GAMM Length = 263 Score = 70.5 bits (171), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 30/98 (30%), Positives = 58/98 (59%) Query: 288 IQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLI 347 ++A+HY+ NH I + ++ DA G+S + + +++ +GET+H + +L +A L+ Sbjct: 11 LRALHYLENHYTDSIDLQRIADAAGLSPWHWHRLYRDVMGETLHTTVKWMRLHRAAWLIS 70 Query: 348 STTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRD 385 T +I++ CGY + Q F F+ AY +P++YR+ Sbjct: 71 YTDKPFADIARECGYNNAQSFARSFRDAYGLSPQQYRE 108 >UniRef50_C0FRI6 Putative uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FRI6_9FIRM Length = 394 Score = 70.5 bits (171), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 39/104 (37%), Positives = 60/104 (57%) Query: 287 VIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLL 346 + M+YIR+H + I ++ V + S S + K+FK E+G + A I KLE+A+SLL Sbjct: 291 IYACMNYIRSHTNEAICLEDVAAHIDRSTSFIAKKFKSELGFSPGAYISRCKLEEAKSLL 350 Query: 347 ISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSEV 390 T S+ EIS Y S +F + FKK Y TP++YR+ ++ Sbjct: 351 TFTEKSLTEISNYLCYSSQAHFQTAFKKKYGITPRQYRNKTQQI 394 >UniRef50_Q3IXB5 Transcriptional regulator, AraC family with amidase-like domain n=3 Tax=Rhodobacter sphaeroides RepID=Q3IXB5_RHOS4 Length = 343 Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 30/100 (30%), Positives = 57/100 (57%) Query: 284 DPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKAR 343 PA+I + + H + ++++ DA G SR ++E+ FK VGET + +L++ R Sbjct: 231 SPALIAVVKLMNEHLEDTLSLEELSDAAGCSRRHVERLFKATVGETPNGFYRGLRLDRGR 290 Query: 344 SLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEY 383 +LL +T +++ E++ CG+ S+ +F FK + T P + Sbjct: 291 NLLSTTDMTLLEVATACGFNSVSHFSKCFKARFGTVPTRF 330 >UniRef50_C3WEF1 Putative uncharacterized protein n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WEF1_FUSMR Length = 285 Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 52/186 (27%), Positives = 86/186 (46%), Gaps = 11/186 (5%) Query: 210 PEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGY-QAAKLLHRLLDK------EEMPLQ 262 P K IG D E +YL + + R + LL +L + EE+ LQ Sbjct: 80 PWKYFWIGFDGEGAEKYLRELGIIQHKPIFRTDKLDELFSLLKEMLKRKNLTLAEELKLQ 139 Query: 263 RILVPPVRVIERRST----DYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNL 318 + +I ++ D ++ +P V + + YI+N+ I V+ +++ VG++RS L Sbjct: 140 GLFYEFFSLIVEENSIEEKDEKNELNPYVDKIITYIKNNYWDDINVNNIIEYVGLNRSYL 199 Query: 319 EKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDT 378 FK+ +G TI + +L +A LL T SI ++ CGY F +KK Y Sbjct: 200 STLFKKNMGITIQEYLTVFRLSRANELLDITNESIENVANSCGYKDPLVFTKAYKKKYGV 259 Query: 379 TPKEYR 384 TP ++R Sbjct: 260 TPTQHR 265 >UniRef50_C9AXU1 Transcriptional regulator n=3 Tax=Enterococcus casseliflavus RepID=C9AXU1_ENTCA Length = 299 Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 51/163 (31%), Positives = 88/163 (53%), Gaps = 18/163 (11%) Query: 236 AQGARQMGYQAAKLLHRLL---DKEEMP-----------LQRILVPPVRVIERRSTDYRS 281 ++ RQ G QA K L +LL D +E P +R+L+ + + T + Sbjct: 115 SRDVRQFG-QAIKSLLQLLMIDDTQEQPSAERQFTIELLFKRMLMELAFSLRTKETKRGN 173 Query: 282 LTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEK 341 A A++YI+ H + I+V Q+ AVGI+++ L K F E++G T++ + +E+L++ Sbjct: 174 CYVNA---AINYIQQHFDEDIQVSQIAAAVGITKTYLHKLFHEQLGVTVNHFLTSERLKQ 230 Query: 342 ARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 A LL ++ L I EI+ G+ S Q+F + FK+ +PK Y+ Sbjct: 231 AAFLLSNSQLPIVEIAAQAGFNSRQHFTNTFKQKKGMSPKAYQ 273 >UniRef50_B8FML1 Transcriptional regulator, AraC family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FML1_DESAA Length = 329 Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 39/125 (31%), Positives = 69/125 (55%), Gaps = 3/125 (2%) Query: 264 ILVPPVRVIE---RRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEK 320 +LV P R + ++ ++ D A++ A ++ H +G+ ++ D VG+S + ++ Sbjct: 201 LLVDPSRTTQAPYMTASFKKNHGDKAILAAQEWMEEHFMEGVTMEDAADYVGLSSRHFKR 260 Query: 321 RFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTP 380 RFK+ V ET + +LE A+ L +TT +I+EI++ GY F +FKK +P Sbjct: 261 RFKQAVEETPLNYLQQVRLEAAKKALETTTDNIDEITRQVGYEDASTFRRLFKKHTTLSP 320 Query: 381 KEYRD 385 +EYRD Sbjct: 321 REYRD 325 >UniRef50_UPI0001788F31 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788F31 Length = 763 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 36/104 (34%), Positives = 62/104 (59%), Gaps = 1/104 (0%) Query: 287 VIQAMHYIRNHACKG-IKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSL 345 V++ Y+ NH + ++QV D S S + + FKE + ++ I E++EK + Sbjct: 643 VLEIKEYVDNHLQDAQLSIEQVADNFSFSVSYIRQLFKEIMNVSLSEYILQERIEKVKEK 702 Query: 346 LISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSE 389 LIS+ LS+ EI+ CG+ S +F+S FKK + TPK+YR+++ + Sbjct: 703 LISSQLSVLEIADQCGFISKGHFFSAFKKFTNLTPKQYREIHGD 746 >UniRef50_C4Z3B2 Two-component system, response regulator YesN n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z3B2_EUBE2 Length = 514 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 33/94 (35%), Positives = 55/94 (58%) Query: 292 HYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTL 351 +YI NH + I Q+ D V ++ S L FK+E G+ + I ++EKA+ LL T + Sbjct: 416 NYIHNHYGEEIGAQQLADMVYLAPSYLSSLFKKETGQNLSKYIKQYRMEKAKELLTGTNM 475 Query: 352 SINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRD 385 I IS+ GYP++ YF F++ + +P+++RD Sbjct: 476 KIVNISEQVGYPNVSYFVQSFREYFGISPQKFRD 509 >UniRef50_A8RZF9 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RZF9_9CLOT Length = 346 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 72/272 (26%), Positives = 131/272 (48%), Gaps = 29/272 (10%) Query: 18 YDRQVVEGVGEYLQASQSEWDIFIEEDFRARIDKIKDWLGDGV-IADFDDKQIEQALADV 76 Y ++++ G L SE+DI E++F I + GV + ++IE+ L D+ Sbjct: 87 YIQKILHNNGYMLMVLNSEYDIRREKEF---IHMAIQFNFSGVFLLTAQSEEIEKELDDI 143 Query: 77 DVPIVGVG---GSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRFAFYGLPESSGK 133 ++P+V V GSY +S + +DN+ A +HL E G AF P+ S Sbjct: 144 EIPVVLVNRILGSYE-GDS------VLSDNFKAGYIAAMHLIELGYPEIAFVKGPDVSS- 195 Query: 134 RWATEREY-AFRQLVAEEKYR-----GVVYQGLETAPENWQHAQNRLADWLQTLPPQTGI 187 A+E+ + +RQ A E YR V++G + A+ ++D L+ P GI Sbjct: 196 --ASEQRFRGYRQ--ALENYRLPFKEQNVFKGDLKLDTGSELAKIYISD-LKNRP--KGI 248 Query: 188 IAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAA 247 + D A ++ C + +PE++ V+ DN + L ++L++V+Q R+M AA Sbjct: 249 VISNDMMAIGFVEHCRESGVKIPEQISVVSFDNIVFSS-LYDISLTTVSQHVREMSEHAA 307 Query: 248 KLLHRLLDKEEMPLQRILVPPVRVIERRSTDY 279 +L+ + L + +R+++ P ++ R + Y Sbjct: 308 RLMLKQLKNPQEKPERVILDPTLIVRRTTCPY 339 >UniRef50_B1B7W8 Transcriptional regulator, AraC family protein n=1 Tax=Clostridium botulinum C str. Eklund RepID=B1B7W8_CLOBO Length = 769 Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 40/105 (38%), Positives = 60/105 (57%), Gaps = 1/105 (0%) Query: 286 AVIQAMHYI-RNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARS 344 V +A +YI +N+ + V+ V + V IS + L FK GE+I I+ + E A+ Sbjct: 665 TVEKAKNYIEKNYTNSLLSVELVSEYVNISPNYLRTLFKNITGESISKYINICRFENAKK 724 Query: 345 LLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSE 389 LLI+T L+I +IS GY + YFY+ FKK Y +P ++R N E Sbjct: 725 LLINTDLTILDISSKVGYSNNNYFYTAFKKTYGISPSQFRRNNKE 769 >UniRef50_C0D596 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C0D596_9CLOT Length = 429 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 34/102 (33%), Positives = 56/102 (54%) Query: 284 DPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKAR 343 P V +A+ YIR H + + + Q+ + + +S S L + F E+GE++ I ++EKA Sbjct: 325 SPLVRRAVTYIRLHLAEPLTLKQIAEGIRVSPSYLSRTFNREIGESVSNYIAGARVEKAA 384 Query: 344 SLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRD 385 LL T L + I+ G+ +L YF F+ TTP +YR+ Sbjct: 385 ELLKFTGLPVQNIASYVGFANLNYFSRCFRLHKGTTPTQYRN 426 >UniRef50_Q1WTL6 Transcriptional regulator, AraC family n=2 Tax=Lactobacillus salivarius RepID=Q1WTL6_LACS1 Length = 278 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 43/127 (33%), Positives = 65/127 (51%), Gaps = 3/127 (2%) Query: 265 LVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKE 324 ++ +I R ST S++D V +A+ I N I + +G+ RS L KRFK+ Sbjct: 153 IISNATIISRESTT--SISDIYVEKAISLI-NKNFPNISAASLAQMIGLDRSYLGKRFKK 209 Query: 325 EVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 G T+ + K+ +AR L+ ST LS+ EISQ CGY + FK Y TP ++R Sbjct: 210 VTGMTLQTYLKNYKITQARHLIESTNLSLLEISQRCGYQRVDSLARTFKATYGLTPSDFR 269 Query: 385 DVNSEVM 391 E++ Sbjct: 270 LQQKELL 276 >UniRef50_C8WRN2 Transcriptional regulator, AraC family n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WRN2_ALIAD Length = 274 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 32/92 (34%), Positives = 54/92 (58%) Query: 293 YIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLS 352 YI HA + + + + DAVG+S S + FKE G+T+ + +L+ A + + L+ Sbjct: 179 YIERHAAEDLSLSDIADAVGLSVSRVVHIFKEAYGQTVVQYLQNVRLQMACDRMRFSNLN 238 Query: 353 INEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 + EI+ CG+ S YFY VF++ Y +P+E+R Sbjct: 239 LEEIADRCGFHSYSYFYRVFRQKYGISPREFR 270 >UniRef50_B2A2D9 Transcriptional regulator, LacI family n=3 Tax=Clostridia RepID=B2A2D9_NATTJ Length = 355 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 55/189 (29%), Positives = 92/189 (48%), Gaps = 15/189 (7%) Query: 73 LADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRFAFYGLPESSG 132 L + D P V + S+ +P V+ TD Y ++ A HL +G AF PE+S Sbjct: 136 LENNDTPFVLLDRSFSGPLDFPKVY---TDGYKGIKLAMNHLITRGHRDIAFLSGPETS- 191 Query: 133 KRWATEREYAFRQLVAE-----EKYRGVVYQGLETAPENWQHAQNRLADWLQTLPPQTGI 187 + A +R +RQ ++E E ++Y G A Q +A+ L T P T + Sbjct: 192 -QTAKDRLEGYRQALSEAGLTPESESQLIYYGDYKALSGEQG----IAELLDTNPHITAV 246 Query: 188 IAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAA 247 +A D A ++ ++ + +PE + +IG DN + +R L L++VAQ + QMG A Sbjct: 247 VAANDLMAVGAMRTIKNRGLKIPEDISIIGFDNIQTSR-LVDPPLTTVAQPSYQMGQMAT 305 Query: 248 KLLHRLLDK 256 +L +++K Sbjct: 306 DILIDMIEK 314 >UniRef50_C6LAW9 Putative transcriptional regulator n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LAW9_9FIRM Length = 303 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 47/167 (28%), Positives = 82/167 (49%), Gaps = 12/167 (7%) Query: 234 SVAQGARQMGYQAAKLLHRLLDKEEMP-------LQRILVPPVRVIERRSTDYRSLTDPA 286 +V+ R MGY LL RL + E P R+L+ RR RS + Sbjct: 119 AVSDDQRSMGYSMKDLLSRLQKQPEQPDFLFRLLFYRMLLEMTWCFRRR----RSASGLE 174 Query: 287 VIQ-AMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSL 345 ++ A YI H + + + + G+++S L+ F + TI + I+ ++L +A L Sbjct: 175 YLKKACDYIDRHLLEELSIPAIAACAGVNKSYLQALFSRTMHCTIGSYINQKRLNQAVFL 234 Query: 346 LISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSEVML 392 L +++LS+ +++ GY S Q+F F+K Y +P YR ++S +L Sbjct: 235 LTNSSLSVTDVAFASGYNSRQHFAHTFQKFYGISPSHYRRLHSRQLL 281 >UniRef50_C0X0R3 LacI family transcriptional regulator n=25 Tax=Bacteria RepID=C0X0R3_ENTFA Length = 353 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 65/234 (27%), Positives = 105/234 (44%), Gaps = 20/234 (8%) Query: 58 DGVIA--DFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLK 115 DG++A F K + Q L + + +G ++ L E + TD Y E A HL Sbjct: 127 DGILAIGKFTQKTL-QELQQLHPNLCVIGSNFPLEE----FDSVNTDFYQATEIALTHLL 181 Query: 116 EKGVNRFAFYGLPESSG----KRWATEREYAFRQLVA-----EEKYRGVVYQGLETAPEN 166 E G + AF G ES +R+ T A+ ++ E Y + G+ Sbjct: 182 ELGHEKIAFIGAEESENMYGFRRYKTPTTNAYLDIMQHYHLFNEDYFILKENGMLDVKTG 241 Query: 167 WQHAQNRLADWLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRY 226 Q + L W LP T I+A DA A ++ I VPE++ V+GI++ +++Y Sbjct: 242 EQLTEEALEKWGNDLP--TAILAYNDAFAIGVIHTLAAHGIKVPEEISVMGINDISISQY 299 Query: 227 LSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYR 280 +S LSSV +MG LLH+ + +P +R+L+ V+ + +T R Sbjct: 300 VSP-PLSSVHAFTEEMGETGINLLHKRIQMPSIP-RRVLLNTELVVRQSTTSPR 351 >UniRef50_A0Q2M6 Transcriptional regulatory protein n=6 Tax=Clostridium RepID=A0Q2M6_CLONN Length = 246 Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 37/96 (38%), Positives = 54/96 (56%) Query: 289 QAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLIS 348 + + YI + I + V D V S S L K FK+E+G + I +++KA+ +LI+ Sbjct: 146 EVVEYIDKNFKNDITLKDVADHVNFSSSYLSKLFKKEMGINFNRYITKIRIDKAKEILIN 205 Query: 349 TTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 + +SINEI+ GY YF VFKK + TP EYR Sbjct: 206 SNISINEIAFSVGYNEPNYFCKVFKKIVNMTPSEYR 241 >UniRef50_D1PQT3 Putative two-component response regulator n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQT3_9FIRM Length = 519 Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 35/109 (32%), Positives = 61/109 (55%) Query: 275 RSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMI 334 RS ++ + AV +A +I + + I + D G+S ++L + FK EVG+ + Sbjct: 403 RSEPAQTPSSAAVARAQEFILQNYARDISLQDCADYAGVSYTHLSRAFKSEVGQRFVEFL 462 Query: 335 HAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEY 383 +A +L A++LLI LS+ EI + G+ S YF+ VF+++ TP E+ Sbjct: 463 NAVRLRAAKALLIRQDLSMKEIVERTGFRSYNYFFKVFRESEGMTPSEF 511 >UniRef50_A5V467 Transcriptional regulator, AraC family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V467_SPHWW Length = 296 Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 33/103 (32%), Positives = 57/103 (55%) Query: 282 LTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEK 341 L+ P + + Y+ H + I +D + G+SR + + FK+ VG T HA + ++ + Sbjct: 191 LSSPVLQRVKDYVEAHIAEDISLDMLAREAGVSRFHFIRLFKDSVGMTPHAYLIERRMVR 250 Query: 342 ARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 A +LL+ T SI EI+ CG+ YF + F++ Y P+E+R Sbjct: 251 ACNLLMHTKQSIGEIAVNCGFEDPSYFAARFRRLYRMCPREFR 293 >UniRef50_UPI0001968711 hypothetical protein BACCELL_00058 n=1 Tax=Bacteroides cellulosilyticus DSM 14838 RepID=UPI0001968711 Length = 1310 Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 44/143 (30%), Positives = 75/143 (52%), Gaps = 7/143 (4%) Query: 245 QAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKG-IK 303 Q +L+ ++E L+ ++ IE S + + QAM I + K Sbjct: 1169 QIMNILNTRQKRKEQLLKNLIAKDSDTIEFNSKEV------FLQQAMKVIEENLDKADFN 1222 Query: 304 VDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYP 363 +++ A+ IS++ L K+F+ +G+T + I A +L KA LLI++ LSI EI+ + G+ Sbjct: 1223 IEEFSIAMNISKTVLHKKFRMLIGQTPNQFIRAIRLRKASELLINSDLSIAEIAYLTGFN 1282 Query: 364 SLQYFYSVFKKAYDTTPKEYRDV 386 YF FK+ Y+ TPK +RD+ Sbjct: 1283 QAHYFIKCFKEIYNETPKNFRDL 1305 >UniRef50_A6NS86 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NS86_9BACE Length = 425 Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 31/98 (31%), Positives = 55/98 (56%) Query: 287 VIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLL 346 + +A+ Y++ + + ++ VG+S S + FKEEVGE+ ++ + A ++ + R++L Sbjct: 311 ICKAIEYLKRNCRDRVTLEDTAGHVGLSPSYFSRVFKEEVGESFNSYLTALRISRGRAML 370 Query: 347 ISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 + T SI EI CG+ YF VF+K TP +R Sbjct: 371 LDTDASIAEICDRCGFDDQSYFTKVFRKYTGVTPGRFR 408 >UniRef50_Q03DV2 Transcriptional regulator, AraC family n=1 Tax=Pediococcus pentosaceus ATCC 25745 RepID=Q03DV2_PEDPA Length = 384 Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 34/100 (34%), Positives = 59/100 (59%) Query: 285 PAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARS 344 P + + +++I +H + + +D + +++ L +FK+E G TIH I +K+E+A+ Sbjct: 278 PLIKKIINHIDDHLYEKVTLDTLASVTNKNKAYLSTQFKKETGLTIHQYIQTKKIEEAKH 337 Query: 345 LLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 LL+ T + EIS + + S +F VFK+ TTPKEYR Sbjct: 338 LLLFTEQQLFEISALLSFASQSHFIKVFKQITGTTPKEYR 377 >UniRef50_Q7MC25 AraC-type DNA-binding domain-containing protein n=10 Tax=Gammaproteobacteria RepID=Q7MC25_VIBVY Length = 300 Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 39/124 (31%), Positives = 68/124 (54%), Gaps = 3/124 (2%) Query: 264 ILVPPVRVI---ERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEK 320 ILV +R+ E+ S +L D + +A+ + +H G ++ V + +G+SR+ Sbjct: 175 ILVELIRINFGREQTSPFLEALNDKRISRALQLLHDHPETGWTLETVANQIGMSRAAFAN 234 Query: 321 RFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTP 380 RF VG+ + + +++KA+ LL+ + L I+EI++ GY S + F FKK TTP Sbjct: 235 RFSSLVGKPMFEYLTNLRMQKAQELLLESLLPIDEIAEQVGYESERAFTLTFKKHTGTTP 294 Query: 381 KEYR 384 K +R Sbjct: 295 KRFR 298 >UniRef50_C6D127 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D127_PAESJ Length = 534 Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 33/105 (31%), Positives = 62/105 (59%) Query: 283 TDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKA 342 +D V +++ YI+ + + I + V VG++ + L + FK+E G+ + + K+ +A Sbjct: 426 SDSVVQKSVQYIKENVEEDISREDVAAHVGLNPAYLSRLFKKETGQNLIDYLIETKMARA 485 Query: 343 RSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVN 387 R LL +T ++++ I+Q GY + +F +FKK Y P+EYR+V Sbjct: 486 RQLLDTTGMTVSAIAQQVGYSNFSHFTKMFKKQYGINPQEYRNVT 530 >UniRef50_UPI00017890F2 transcriptional regulator, GntR family with LacI sensor n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI00017890F2 Length = 364 Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 61/215 (28%), Positives = 103/215 (47%), Gaps = 23/215 (10%) Query: 81 VGVGGSYHLAESYP-----------PVHYIATDNYALVESAFLHLKEKGVNRFAFYGLPE 129 +G+ YHLA+ YP P + +DN+ A HL E + AF + Sbjct: 152 LGILYQYHLAK-YPLVTMDKCIEGIPFLSVVSDNFGGGYQASKHLIENNHKKIAF--ISS 208 Query: 130 SSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNR----LADWLQTLPPQ- 184 + ++ RE F L A Y + Y + H + +LQ++ Q Sbjct: 209 LKVENSSSIRERYFGYLKALYDYSLIDYSVNDLTDRYLTHDHDNGREYYIQFLQSVVNQG 268 Query: 185 -TGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMG 243 TGI+A D A I+Q+ + L + VP+ V+G D+ L ++ L++++Q QMG Sbjct: 269 ITGIVAENDLIAIEIIQIAKELGLSVPDDFSVVGFDDIHLASFVEP-KLTTISQDFGQMG 327 Query: 244 YQAAKLLHRLLDKE-EMPLQRILVPPVRVIERRST 277 YQAA+ L L++ E PL+ +++ PVR++ER++ Sbjct: 328 YQAARNLISLIEHPLEHPLENVVI-PVRLMERQTV 361 >UniRef50_D2EI06 AraC family transcriptional regulator n=1 Tax=Pediococcus acidilactici 7_4 RepID=D2EI06_PEDAC Length = 280 Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 34/93 (36%), Positives = 55/93 (59%) Query: 293 YIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLS 352 Y+ + G+ + Q+ + RS L K F+ +G+ +H KL+KA SLL ++L+ Sbjct: 181 YVDENFASGLTISQIAANNNVDRSYLYKLFQRYLGKKPSQYVHQLKLQKACSLLRKSSLN 240 Query: 353 INEISQMCGYPSLQYFYSVFKKAYDTTPKEYRD 385 I +ISQ CG+ S YF +VF K ++TP +YR+ Sbjct: 241 ITQISQECGFSSSAYFTNVFAKEMNSTPLKYRN 273 >UniRef50_B2GEN0 Transcriptional regulator n=1 Tax=Lactobacillus fermentum IFO 3956 RepID=B2GEN0_LACF3 Length = 278 Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 36/98 (36%), Positives = 58/98 (59%), Gaps = 1/98 (1%) Query: 287 VIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLL 346 V QA+ YI +H K + V+ + AV ++RS L FK ++ T I ++ KAR LL Sbjct: 173 VTQAIQYISHHLSK-VTVESLAHAVNLNRSYLTSLFKHDLDLTPSEYIQNFRITKARHLL 231 Query: 347 ISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 S+ +SI+++++ CGY F VFK+ Y +P++YR Sbjct: 232 ESSDISIDQVAEQCGYQRTNSFTRVFKRTYGISPRQYR 269 >UniRef50_Q2BFH4 Putative uncharacterized protein n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2BFH4_9BACI Length = 515 Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 60/105 (57%) Query: 284 DPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKAR 343 D + +A+ YIR + IK +V D V I+ + FK++ G++ + ++ ++E+A+ Sbjct: 410 DWLIERALEYIRTYYKSEIKAQEVADVVNITPNYFSSLFKQKTGKSFNEYVNHMRVEEAK 469 Query: 344 SLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNS 388 +LL T INEI++ G+ +YF VF+K TP +YR + S Sbjct: 470 TLLEETPFKINEIAEQAGFHEYKYFVEVFRKFSGMTPTQYRKLRS 514 >UniRef50_A8SS64 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SS64_9FIRM Length = 328 Score = 68.2 bits (165), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 38/104 (36%), Positives = 58/104 (55%) Query: 287 VIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLL 346 V A+ +I IK+D + D +GISRS+L FK+E+G + + +LEKA SLL Sbjct: 211 VKAAVDFITEKYMNKIKIDDIADFIGISRSHLTGSFKKEMGVSPQEYLINFRLEKAASLL 270 Query: 347 ISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSEV 390 S+ IN I+ CGY F FK+ + +PK +R++ E+ Sbjct: 271 RSSKEQINIIAYQCGYEDSLSFSKAFKQKFGMSPKSFRNLEVEL 314 >UniRef50_UPI0001C36264 transcriptional regulator, AraC family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C36264 Length = 282 Score = 68.2 bits (165), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 46/163 (28%), Positives = 81/163 (49%), Gaps = 1/163 (0%) Query: 223 LTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRV-IERRSTDYRS 281 L + + V Q AR + + ++ + +K++ ILV + + R + +S Sbjct: 113 LGTFFQNLNTGLVIQNARNIFHLLEEICNETNNKKDPYYLNILVNKALIEVVRLLSAEKS 172 Query: 282 LTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEK 341 TD V Q +YI H +D++ V +++ L+K F+E+ G TI + ++EK Sbjct: 173 PTDTYVEQTKNYINYHFFSIENIDEIASYVALNKVYLQKIFREKTGLTIWNYLTKYRMEK 232 Query: 342 ARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 A L+ + I++I ++ G S Q FY +FKK Y +P EYR Sbjct: 233 AVYFLLYSDTPISDIDELVGINSRQNFYLLFKKQYGMSPSEYR 275 >UniRef50_UPI000178854F two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178854F Length = 563 Score = 68.2 bits (165), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 36/118 (30%), Positives = 63/118 (53%) Query: 271 VIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETI 330 + +R+ + + + YI +H + + Q+ +AVG + S L + +K+ GE + Sbjct: 445 IFKRKEQGKQDQQHEVIAKVQRYIEDHLSGDLSLTQIGEAVGHNPSYLSRLYKQVTGEGL 504 Query: 331 HAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNS 388 I+ +L KA+ LL TT I+ I+ G+ S YFY FKK TP+EYR++++ Sbjct: 505 SESINTARLAKAKQLLKETTDKIHVIAAAVGFSSPPYFYRFFKKTTHLTPQEYRELHN 562 >UniRef50_C6IXM8 Two component transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IXM8_9BACL Length = 550 Score = 68.2 bits (165), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 35/97 (36%), Positives = 52/97 (53%) Query: 293 YIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLS 352 YI +H + IK+ + +SR L K FK++ G IH + +++KA+ LL ++L Sbjct: 449 YIDHHYFEDIKISMFTERFFLSREYLMKLFKQQYGCGIHEYVQKVRMDKAKELLDDSSLK 508 Query: 353 INEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSE 389 I EIS+M GY YF F+ Y +P EYR E Sbjct: 509 IQEISEMLGYKDKNYFSKAFRNYYALSPSEYRQQQEE 545 >UniRef50_C6J2Y7 Transcriptional regulator (Fragment) n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J2Y7_9BACL Length = 118 Score = 68.2 bits (165), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 36/110 (32%), Positives = 64/110 (58%), Gaps = 1/110 (0%) Query: 277 TDYRSLTDPAVIQAMH-YIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIH 335 + + SL +++A+ Y+ H + I++ + + I + KRFKE+ GE+ ++ Sbjct: 4 SKHSSLEGKEIMEAVRLYLEQHYAEPIQLQMIAERFFIHPNYFSKRFKEKYGESFVDYLN 63 Query: 336 AEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRD 385 + ++++A +LL T L I EIS+ G+ YF SVF+K Y TPK+YR+ Sbjct: 64 SIRMKEAAALLGETNLKIREISERVGFEDAAYFSSVFRKWYGETPKQYRE 113 >UniRef50_A8VSW1 Propanediol utilization protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VSW1_9BACI Length = 405 Score = 68.2 bits (165), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 50/177 (28%), Positives = 77/177 (43%), Gaps = 17/177 (9%) Query: 212 KLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRV 271 ++ +GID EL Y R L + MG LD +M V Sbjct: 237 RIAEVGIDFRELQHYSDRFILK--VEQTEDMGSLLRLFQQMFLDLFDM-----------V 283 Query: 272 IERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIH 331 E R Y +V+ + YIRNH ++D V VG++ FKEE G+TI Sbjct: 284 EEYRQESYSQ----SVLIGIRYIRNHLDSSFRLDNVAKEVGLNPRYFGTLFKEETGKTIL 339 Query: 332 AMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNS 388 + E++ A+ LL I ++++ G+ S +F VF+K TPK Y++ +S Sbjct: 340 QFVTEERISLAKRLLRDRQNDIADVAKYVGFSSQSHFTQVFRKKVGKTPKVYQETHS 396 >UniRef50_C9XKB1 AraC-family transcriptional regulator n=18 Tax=Clostridiales RepID=C9XKB1_CLODC Length = 294 Score = 68.2 bits (165), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 37/98 (37%), Positives = 55/98 (56%) Query: 287 VIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLL 346 VI A+ YI H + + +D + +AV S+ +L + F VG T+H I KL +A LL Sbjct: 16 VITAIDYIEEHLSEKLDLDIIANAVHYSKYHLHRTFTTSVGLTMHDYIKRRKLTEAAKLL 75 Query: 347 ISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 + + I EI+ + GY S Q F S+FK Y +P +YR Sbjct: 76 VFSKKPIIEIALIAGYESQQAFTSIFKAMYKKSPNKYR 113 >UniRef50_A4B8V7 Transcriptional regulator, AraC family protein n=1 Tax=Reinekea blandensis MED297 RepID=A4B8V7_9GAMM Length = 164 Score = 68.2 bits (165), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 35/114 (30%), Positives = 57/114 (50%) Query: 271 VIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETI 330 VI + D + P + + YI H + V ++ G+S++N + F VG + Sbjct: 37 VINQEEVDSTVINYPVLEHILQYIDVHLSGALDVPKLAGIAGLSQANFTRIFSRHVGSSP 96 Query: 331 HAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 I ++LE+A LL + LS+N IS CG+ YF VFK+ + +P E+R Sbjct: 97 ADYILQKRLERATKLLSDSQLSVNHISLSCGFKDANYFSKVFKRIFSISPVEFR 150 >UniRef50_C7G788 Transcriptional regulator, AraC family n=2 Tax=Bacteria RepID=C7G788_9FIRM Length = 292 Score = 67.8 bits (164), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 37/130 (28%), Positives = 65/130 (50%) Query: 255 DKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGIS 314 D ++ + ++ + +I S + L + +HY+ H + I +DQ+ + IS Sbjct: 160 DDTDLLTAQQIIHILTLICTESNEKNELLSDKLKTILHYLDEHYTENISLDQLAEQFFIS 219 Query: 315 RSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKK 374 + L + FK+E G T+ + A+++ A+ LL + SI EI+ +CG YF VF+K Sbjct: 220 KYYLSREFKKEFGTTVIQYVLAKRINNAKELLRYSNSSIEEIAHLCGIDDASYFNKVFRK 279 Query: 375 AYDTTPKEYR 384 T EYR Sbjct: 280 MEGCTASEYR 289 >UniRef50_Q2B9I5 Putative uncharacterized protein n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2B9I5_9BACI Length = 520 Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 38/101 (37%), Positives = 53/101 (52%), Gaps = 1/101 (0%) Query: 285 PAVIQAMHYIR-NHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKAR 343 PAV A I N+ +G + +++GI +S L +RF E G T +H ++ +A+ Sbjct: 414 PAVEIAEELIESNYWNEGWNLSDCAESLGIHKSTLSRRFAAEKGLTFRERLHQIRIREAK 473 Query: 344 SLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 LLI T L I I+ MCGY YF S FK +TP YR Sbjct: 474 RLLIETDLPIERIAAMCGYSHPSYFSSKFKSIASSTPASYR 514 >UniRef50_Q5LPZ2 Transcriptional regulator, AraC family n=2 Tax=Rhodobacterales RepID=Q5LPZ2_SILPO Length = 361 Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 36/101 (35%), Positives = 58/101 (57%) Query: 285 PAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARS 344 P V QAM I + + + V Q+ A+ +S+ LE++FK+ VG T+ +L+ AR Sbjct: 222 PLVRQAMTLIERNIEEPLTVPQIAAALDVSQRQLERQFKKHVGCTVVQFGLLRRLQNARV 281 Query: 345 LLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRD 385 LLI+T LS+ EI+ G+ +L +F F K + P +YR+ Sbjct: 282 LLIATELSVREIATASGFNTLSHFSYSFSKFFGRRPSDYRE 322 >UniRef50_C4G5N9 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G5N9_ABIDE Length = 513 Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 33/102 (32%), Positives = 58/102 (56%) Query: 287 VIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLL 346 + +A+ +I+ H + I ++Q+ ++ L + FKEE G A + +L+KA LL Sbjct: 403 IFKAVVFIQQHYNEPISLEQIAQEANLNPEYLSRVFKEETGYNYSAFLSNIRLKKAEYLL 462 Query: 347 ISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNS 388 I+T + I++M GY ++ YF ++FKK Y P E+R N+ Sbjct: 463 INTVEKVQNIAEMVGYSNVSYFSTIFKKKYGVNPYEFRRNNA 504 >UniRef50_C9KJL3 AraC-type DNA-binding domain-containing protein, transcriptional regulator n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KJL3_9FIRM Length = 303 Score = 67.4 bits (163), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 59/199 (29%), Positives = 87/199 (43%), Gaps = 24/199 (12%) Query: 209 VPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMG---YQAAKLLHRLL---DKEEMPLQ 262 P + VI I + L R R L+ AR+ G +Q H LL DK E Sbjct: 89 TPYERIVIYIAPDFLQRLDERAKLAKCFAAAREQGRVMHQLPNRSHDLLFHMDKLEKTAH 148 Query: 263 ----------RILVPPVRVIERRSTDYRSLT-------DPAVIQAMHYIRNHACKGIKVD 305 IL ++ RS + L DP + Q + YI H + + Sbjct: 149 GEGFANGLYTEILFIEFLILLNRSIEDHELESLDTVSYDPKIQQVLRYINEHLADDLTIA 208 Query: 306 QVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSL 365 + + V +SR L KRFK + G ++HA I +++L AR LL + T SI EIS+ G+ Sbjct: 209 TLANQVFLSRYYLMKRFKADTGYSLHAYIRSKRLLFARDLLRTET-SIQEISRASGFRDY 267 Query: 366 QYFYSVFKKAYDTTPKEYR 384 F F+ + +PKE+R Sbjct: 268 STFSRAFRTLFHCSPKEWR 286 >UniRef50_C6D4A8 Two component transcriptional regulator, AraC family n=2 Tax=Bacillales RepID=C6D4A8_PAESJ Length = 504 Score = 67.4 bits (163), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 39/104 (37%), Positives = 58/104 (55%), Gaps = 1/104 (0%) Query: 284 DPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKAR 343 + AV Y++ H + I++ ++ D V ++ S L K FK E GETI + +E++E+A+ Sbjct: 399 NKAVDTIKAYLQKHYTEEIELQRLADLVYLTPSYLSKLFKTETGETITDYLTSERIEQAK 458 Query: 344 SLLIST-TLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDV 386 LL L + +M GY YF VFKK TPKEYRD+ Sbjct: 459 RLLRDGHGLKTYMVGEMVGYADPAYFTKVFKKMTGKTPKEYRDI 502 >UniRef50_C5ETU0 Two component transcriptional regulator n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ETU0_9FIRM Length = 517 Score = 67.4 bits (163), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 34/97 (35%), Positives = 57/97 (58%), Gaps = 1/97 (1%) Query: 289 QAMHYI-RNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLI 347 +A H+I N+A + + D VG++ RF +E G T + + +LEKA+ L+ Sbjct: 417 RARHFIADNYASPEMTLKSTADYVGLNEKYFSTRFTKETGMTFSTYLTSVRLEKAKRLME 476 Query: 348 STTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 ST L + EIS GY ++++F +FKKAY +P++Y+ Sbjct: 477 STDLKMYEISDRVGYHNVEHFNRMFKKAYGISPRDYK 513 >UniRef50_D1PKE0 Transcriptional regulator, AraC/XylS family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PKE0_9FIRM Length = 324 Score = 67.4 bits (163), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 32/102 (31%), Positives = 57/102 (55%), Gaps = 1/102 (0%) Query: 284 DPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKAR 343 P V+ A+ I ++ C+ + V + +S L ++ G T ++ ++L++A+ Sbjct: 217 SPLVLAALREIEDN-CRDASLSHVAERFHVSLPYLSALIRQATGNTFKELLQQKRLDRAQ 275 Query: 344 SLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRD 385 LL +T L + I++ GY + YFY ++KKA+ TPKEYRD Sbjct: 276 QLLRTTRLPVQAIAESVGYDTTSYFYGIYKKAFGITPKEYRD 317 >UniRef50_B1R4J4 Response regulator receiver protein n=3 Tax=Clostridium perfringens RepID=B1R4J4_CLOPE Length = 524 Score = 67.4 bits (163), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 34/103 (33%), Positives = 58/103 (56%) Query: 288 IQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLI 347 +Q YI + + + V ++ + ++ S L F +E+GE++ + I ++ KA+ LL Sbjct: 421 VQVKKYIEKNYSEDLSVKKLAELFNVNYSYLSAIFTKEIGESVVSYITKVRIMKAKKLLE 480 Query: 348 STTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSEV 390 +T+ I I++ GY LQYFY VFKK TP YR++ +V Sbjct: 481 NTSADIGTIAESVGYSDLQYFYRVFKKNTQKTPMSYRNITKKV 523 >UniRef50_P07642 Arabinose operon regulatory protein n=160 Tax=Proteobacteria RepID=ARAC_ERWCH Length = 310 Score = 67.4 bits (163), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 40/130 (30%), Positives = 71/130 (54%), Gaps = 3/130 (2%) Query: 261 LQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEK 320 L+R+L+ R +E + + DP VI+A +I ++ +++D+V V +S S L Sbjct: 162 LERLLL---RAMEEDPQSPQKIMDPRVIEACQFITSNLAGELRIDEVARHVCLSPSRLAH 218 Query: 321 RFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTP 380 F+E+VG I +++ +A+ LL +T SI I ++ GY YF VF+K +P Sbjct: 219 LFREQVGINILRWREDQRVIRAKLLLQTTQESIANIGRVVGYDDQLYFSRVFRKRVGVSP 278 Query: 381 KEYRDVNSEV 390 ++R +SE+ Sbjct: 279 SDFRRRSSEI 288 >UniRef50_B1QZ71 Two-component response regulator n=2 Tax=Clostridium butyricum RepID=B1QZ71_CLOBU Length = 414 Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 35/96 (36%), Positives = 56/96 (58%) Query: 290 AMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLIST 349 A YI N+ K I + V D V +S++ L + FK+E+GE + + +++KA+ +L++T Sbjct: 315 AKDYIINNYNKNISLKDVADEVYLSQNYLSELFKKEIGEGFYDFLSKYRIKKAKEVLLTT 374 Query: 350 TLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRD 385 L + EI+QM GY F FKK TTP +R+ Sbjct: 375 NLKVYEIAQMVGYNDSITFGRAFKKITGTTPNNFRN 410 >UniRef50_C7PFA7 Transcriptional regulator, AraC family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PFA7_CHIPD Length = 309 Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 48/169 (28%), Positives = 83/169 (49%), Gaps = 15/169 (8%) Query: 219 DNEELTRYLSRVALSSVAQGARQMGY---QAAKLLHRLLDKEEMPLQRILVPPVRVIERR 275 +N E+T ++++ +Q + Y Q +LL RLL +++ + +E Sbjct: 146 NNHEITELINKLIRICTSQDKSKNIYADLQLKELLIRLLQSQQLG---------QAVESS 196 Query: 276 STDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIH 335 D V +HYIR H + I VD + +SR+ K F+E+ G T ++ Sbjct: 197 VADNNGNRLNFV---LHYIREHLTEKIAVDALSRKAYLSRNLFFKWFREQFGITPVEYVN 253 Query: 336 AEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 E+++ A+ LL SI ++S++CG+ + YF VF+K TTPK Y+ Sbjct: 254 KERIKLAKELLAKPQSSIYDVSKLCGFTDVNYFIRVFRKIEGTTPKVYQ 302 >UniRef50_A8VRA2 Methyl-accepting chemotaxis sensory transducer n=2 Tax=Bacillus RepID=A8VRA2_9BACI Length = 262 Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 30/101 (29%), Positives = 60/101 (59%) Query: 287 VIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLL 346 +++A+H+I +H I + V V ++ + L FKE+VG T + ++L+ A+SLL Sbjct: 158 ILEALHFIDDHLSDKIGIKDVAATVHLNPNYLSAHFKEQVGMTFSEYLTRKRLQYAKSLL 217 Query: 347 ISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVN 387 ++++ ++ +I+ GY + +YF +FK+ TP ++R N Sbjct: 218 LNSSSTVADIADKSGYQTAKYFVKIFKEYEKMTPSQFRKAN 258 >UniRef50_A8FI25 Response regulator n=2 Tax=Bacillus pumilus RepID=A8FI25_BACP2 Length = 472 Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 35/96 (36%), Positives = 52/96 (54%) Query: 289 QAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLIS 348 +A YI+ H C+ I ++Q V +S + KRFK+ G T + +L+K + LL Sbjct: 371 RAKRYIKTHFCEQITLEQTAAYVDLSPTYFTKRFKDVTGLTFKEYVTNCRLDKIKKLLKD 430 Query: 349 TTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 ++LS+ EI+ GY Y VFKK +PKEYR Sbjct: 431 SSLSLKEITYQAGYTDPNYVSRVFKKMVGCSPKEYR 466 >UniRef50_UPI0001C35BF7 two component transcriptional regulator, AraC family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35BF7 Length = 418 Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 37/86 (43%), Positives = 52/86 (60%), Gaps = 1/86 (1%) Query: 290 AMHYIRNH-ACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLIS 348 A+ YIR+H K + + V D VGISR+ + FKE +G I ++EKARSL I+ Sbjct: 318 ALDYIRDHLGDKDLSLQTVADQVGISRNYFSRIFKEVMGVNFIDYITRLRVEKARSLYIN 377 Query: 349 TTLSINEISQMCGYPSLQYFYSVFKK 374 T + I EI+++ GY Y YSV+KK Sbjct: 378 TDMKIYEIAELVGYSDWHYLYSVYKK 403 >UniRef50_C8Q370 Transcriptional regulator, AraC family n=1 Tax=Pantoea sp. At-9b RepID=C8Q370_9ENTR Length = 293 Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 35/124 (28%), Positives = 64/124 (51%), Gaps = 3/124 (2%) Query: 261 LQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEK 320 L+RI++ + +R+ DP + HY+ H + +++D + +S S L Sbjct: 164 LERIIL---ELFQRQPASNHRNRDPRIQTVCHYLNEHLAEDVRIDDLARMTYLSSSRLTH 220 Query: 321 RFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTP 380 F++E+G TI ++++ +A LL T LSI +I++ GY YF +F + +P Sbjct: 221 IFRKEMGNTIFGWRESQRISRACDLLQQTQLSITQIARAVGYEDPLYFSRIFSQHRHLSP 280 Query: 381 KEYR 384 +EYR Sbjct: 281 REYR 284 >UniRef50_Q5WK40 Two-component response regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WK40_BACSK Length = 407 Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 31/97 (31%), Positives = 55/97 (56%) Query: 288 IQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLI 347 ++ Y+ H + + +V D + ++ + L KRFKEE GE IH ++++A LL Sbjct: 309 VRVYEYVEAHFFEQPSLQEVADHLFLNAAYLSKRFKEETGEKFSDYIHRLRMDRAVELLA 368 Query: 348 STTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 T + +++I++ GY YF VFK+ + TP+E+R Sbjct: 369 ETNMKVSQIAKKLGYKDASYFIKVFKREFHMTPQEFR 405 >UniRef50_C6LM61 Putative raffinose operon transcriptional regulatory protein RafR n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LM61_9FIRM Length = 252 Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 32/116 (27%), Positives = 67/116 (57%) Query: 277 TDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHA 336 +++R + V A+ YI + K ++++++ D +G++RS L F+E +G + + Sbjct: 126 SEHRYPSSVYVEHAIEYINENYSKRLRINELADYIGVNRSYLTSSFQENIGCSPREYLMK 185 Query: 337 EKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSEVML 392 ++EKA++LL + + +NE++ M GY F +FK +PKEY++ S +++ Sbjct: 186 LRMEKAKTLLKNPDIQVNEVAAMVGYTDPLAFSKIFKSRTGRSPKEYKEEKSRLVV 241 >UniRef50_UPI0001B9ECE6 two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001B9ECE6 Length = 519 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 45/150 (30%), Positives = 74/150 (49%), Gaps = 3/150 (2%) Query: 237 QGARQMGYQAAKLLHRLLDKEEMPL--QRILVPPVRVIERRSTDYRSLTDPAVIQAMHYI 294 + A +GY + + D E+ +++LV + +I + D S T P V +A+ +I Sbjct: 366 RAATSIGYTSPVKVEETYDIRELTKNPEKVLVDSLGLIMKEYRDMVSTTSP-VQRAISFI 424 Query: 295 RNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSIN 354 H + + + QV V ++ + + FK+E G+ + KL KA LL T I+ Sbjct: 425 HEHLGQSLSLQQVAKHVHMNPNYFSEMFKKETGQNYIEFVTQAKLRKAMHLLRETPAKIS 484 Query: 355 EISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 EI+ GY ++YF +FKK TP EYR Sbjct: 485 EIANEIGYEDIKYFNRLFKKWTGLTPSEYR 514 >UniRef50_B0MJZ2 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MJZ2_9FIRM Length = 275 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 41/128 (32%), Positives = 69/128 (53%), Gaps = 3/128 (2%) Query: 258 EMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSN 317 E+ + ++ VR+ R T + L+ P V A+ I + K + V Q+ D G RS+ Sbjct: 147 ELNNEMVMDYAVRMQRLRRT--KRLSVP-VRTAIKMISENTGKRLTVQQIADEAGYDRSH 203 Query: 318 LEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYD 377 L + FK E+G IH I+A ++ A+ +L T +I +I+ + G+ S +F F +A Sbjct: 204 LHRLFKAEIGMGIHEYINASRINAAKGMLKDGTHTIADIASLLGFSSQSHFCRAFSEAVG 263 Query: 378 TTPKEYRD 385 TPKEY++ Sbjct: 264 VTPKEYKN 271 >UniRef50_D2M228 Transcriptional regulator, AraC family n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2M228_BACS4 Length = 406 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 34/99 (34%), Positives = 57/99 (57%) Query: 287 VIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLL 346 + + +HYI + + I + + V ++ S L FK+EVG ++ I K+++A++LL Sbjct: 303 ITECIHYIHQYLYEDITLAHLAHEVNLNPSYLSVLFKKEVGISLSEYIQQTKIDEAKNLL 362 Query: 347 ISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRD 385 + +T SI++I +P YF VFKK TTPK +RD Sbjct: 363 LLSTYSISDIFTWLNFPDQSYFTKVFKKVTGTTPKRFRD 401 >UniRef50_B0A659 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A659_9CLOT Length = 406 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 35/100 (35%), Positives = 58/100 (58%) Query: 286 AVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSL 345 V +A+ +I + + V +V +G+S L + FK+E+G I I+ +++E + L Sbjct: 303 TVKEAVTFINLNLSSNLTVKKVSSKIGLSPDYLTRLFKKEMGMNIITYINKKRIETSLEL 362 Query: 346 LISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRD 385 L T LSI EI + G + YFY++FKK T+PK+YR+ Sbjct: 363 LKVTDLSIAEIGDLIGLNNTSYFYTLFKKETGTSPKQYRN 402 >UniRef50_UPI0001789C33 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789C33 Length = 293 Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 35/122 (28%), Positives = 66/122 (54%), Gaps = 2/122 (1%) Query: 265 LVPPVRVIERRSTDYRSLTDPA--VIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRF 322 L+ + +++R D ++ P + A+ YI +H + V QV + +S S+ ++ F Sbjct: 159 LIQVLAMLQRYECDGSMVSTPTNNMDDAIQYINDHFATNLTVQQVAERSFMSPSHFQRLF 218 Query: 323 KEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKE 382 K+ G T + ++++ LL ST +SI E + GY +++F+S+F+K TP+E Sbjct: 219 KKTTGVTFMQFLQNIRVQRCCELLKSTEISIQEAANQVGYQDMKFFHSLFRKKTGVTPRE 278 Query: 383 YR 384 YR Sbjct: 279 YR 280 >UniRef50_C5EJY2 Predicted protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EJY2_9FIRM Length = 516 Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 29/103 (28%), Positives = 60/103 (58%) Query: 285 PAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARS 344 P + Q ++Y++ + I +++ + G S + L ++FK+E G+ ++ +++ KA+S Sbjct: 414 PVIQQVLNYVQKNFASDISLEKCAEVTGSSYTYLSRQFKQETGQRFVEYLNQQRVNKAKS 473 Query: 345 LLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVN 387 LLI +++ EI + G+ S YF+ +FK++ TP E+ N Sbjct: 474 LLIRHDMTMKEIIEQSGFRSYTYFFKIFKESEGLTPSEFMAKN 516 >UniRef50_B8I4H6 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulolyticum H10 RepID=B8I4H6_CLOCE Length = 760 Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 34/100 (34%), Positives = 59/100 (59%) Query: 287 VIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLL 346 +++ + YI + K I ++ + + VG+S S++ K F +E GE I I+ ++E+A+ LL Sbjct: 658 IVKILDYIHKNYKKDIAINMLAEHVGLSYSHVRKIFNDETGENIVNYINNMRIEEAQRLL 717 Query: 347 ISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDV 386 T ++IN+I+ GY + Q F FKK P EYR++ Sbjct: 718 RQTNMNINDIALSLGYNNKQSFNRFFKKYVGINPGEYRNI 757 >UniRef50_C3JN73 Transcriptional regulator, AraC family n=1 Tax=Rhodococcus erythropolis SK121 RepID=C3JN73_RHOER Length = 379 Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 33/105 (31%), Positives = 55/105 (52%) Query: 284 DPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKAR 343 DP + QA+ + N + +D++ +SRS+ +RF VG+T A I +L++A Sbjct: 272 DPRIGQALEAVHNDPSRNWTIDELATLSTLSRSSFAERFSRLVGQTPGAYITERRLDRAA 331 Query: 344 SLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNS 388 LL+ TT + I+ GY S F F++ +D +P +R NS Sbjct: 332 ELLVQTTEPVGTIAITVGYESDAAFSRAFRRRFDASPLNWRKSNS 376 >UniRef50_A4BF96 Arabinose operon regulatory protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BF96_9GAMM Length = 287 Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 30/101 (29%), Positives = 57/101 (56%) Query: 284 DPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKAR 343 D +++A +I ++ + +D++ +S+S FK++ ++ I +++ AR Sbjct: 183 DARILRACQFIHDNIASELTIDELAQVACMSQSRFSHLFKQQKNVSVRQWIEDQRIALAR 242 Query: 344 SLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 LLI+T L+IN+++Q GY YF VFKK +P+E+R Sbjct: 243 QLLITTDLAINQVAQYLGYQDALYFSRVFKKNLGESPREFR 283 >UniRef50_A8RQG1 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8RQG1_9CLOT Length = 522 Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 1/97 (1%) Query: 289 QAMHYIRNH-ACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLI 347 QA+ YI+NH +D+V AV +S S FK E G T + ++EKAR LL Sbjct: 423 QAILYIQNHYMSSSFSIDEVAGAVCLSTSYFSTVFKSETGITFTDYLIKVRMEKARGLLE 482 Query: 348 STTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 +T++ + EIS GY + YF + FK+ Y +P E++ Sbjct: 483 NTSMKMYEISSRAGYENAAYFSAAFKRYYGKSPSEFQ 519 >UniRef50_A6E6Q9 Sensor protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6E6Q9_9SPHI Length = 918 Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 37/113 (32%), Positives = 65/113 (57%), Gaps = 1/113 (0%) Query: 273 ERRSTDYRSLTDPAVIQAMHYIRNH-ACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIH 331 ER+ RS+ V +I N+ + + + VD++ +G+SR L ++ K +G TI Sbjct: 803 ERKIPISRSIDKKFVNDFAGFIENNLSNEDLNVDKIAKELGLSRVQLYRKIKALMGCTIS 862 Query: 332 AMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 I + +L+KA+ LL++ +I+EI+ M G+ S YF +VFK Y +P E++ Sbjct: 863 EYILSRRLKKAKYLLMNERYNISEITYMVGFASATYFSTVFKTKYGVSPSEFK 915 >UniRef50_UPI000178A97E transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178A97E Length = 757 Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 32/96 (33%), Positives = 54/96 (56%) Query: 291 MHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTT 350 + ++ H I + ++ ++ GIS S + FK+E ETI+ + ++E+A LL+ T Sbjct: 652 IEFMEQHLADPIGIPEIAESTGISSSLASQLFKQETNETIYNYLTRLRMERASELLVKTD 711 Query: 351 LSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDV 386 I++I+QM GY F F+K D TP +YRD+ Sbjct: 712 RKISDIAQMVGYQHENSFIRSFRKFKDITPGKYRDM 747 >UniRef50_UPI0001788C4E two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788C4E Length = 538 Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 32/93 (34%), Positives = 53/93 (56%) Query: 292 HYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTL 351 Y+ H I + Q+ +SR + ++FK+E G T+ + ++EKA++LL++ + Sbjct: 441 QYLEQHYHDEISLQQIAGKFFLSREYISRKFKQEFGVTLSDFLGRIRIEKAKTLLLNPQI 500 Query: 352 SINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 I +I++M GY +YF VFKK TP EYR Sbjct: 501 RIAQIAEMVGYQDEKYFSKVFKKMEGFTPNEYR 533 >UniRef50_C6D456 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D456_PAESJ Length = 283 Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 35/100 (35%), Positives = 50/100 (50%) Query: 289 QAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLIS 348 + Y+ HA +GI V QV + G+ RS + F EE+G + ++EKAR LLI Sbjct: 184 ECAEYMELHATEGITVQQVAEFAGVHRSYFTQVFTEEMGMPPMKYMQKVRMEKARRLLID 243 Query: 349 TTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNS 388 T S+ EI GYP+L F FK + +P R + Sbjct: 244 THASVTEIGLSLGYPNLYTFTRAFKMYFKESPLALRKAEA 283 >UniRef50_B7K731 Transcriptional regulator, AraC family n=2 Tax=Cyanobacteria RepID=B7K731_CYAP7 Length = 309 Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 32/104 (30%), Positives = 61/104 (58%) Query: 281 SLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLE 340 L+D ++ YI ++ IK+ + + +GIS+ + + FK+ VG + H + +++E Sbjct: 200 GLSDGQLLLITDYINDNLAGEIKLSNLSELIGISQFHFSRLFKQTVGISPHQYLMRQRIE 259 Query: 341 KARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 +A+ LL ++ LS+ E++ CG+ S +F F++ TPKEYR Sbjct: 260 RAKLLLKNSPLSVVEVALSCGFSSHSHFGKYFRQITGLTPKEYR 303 >UniRef50_UPI000178A020 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178A020 Length = 280 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 36/105 (34%), Positives = 57/105 (54%) Query: 283 TDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKA 342 DP + QA YI+ +A K + + + + +GIS L +RF VG T + +LE+A Sbjct: 174 ADPLMEQARLYIQQNAYKDMSLLVLAEELGISPVQLTRRFTRSVGMTPSRYLSHIRLEQA 233 Query: 343 RSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVN 387 +SLL+ T L++ +I+ CG+ + Y VF K +P YR N Sbjct: 234 KSLLVDTHLNLEQIALACGFNNGFYLSRVFTKLMKVSPSAYRKTN 278 >UniRef50_A8SHV0 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SHV0_9FIRM Length = 309 Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 37/99 (37%), Positives = 58/99 (58%) Query: 286 AVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSL 345 AV Q YI +H + + +D + + IS+ L + F E G I+ I+ +++KA+SL Sbjct: 197 AVYQISDYISDHFQERLSLDSLAEQFYISKYYLSRSFHEVTGFGINEYINILRVKKAQSL 256 Query: 346 LISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 L +TTLS++EI+ G+ S+ Y VFKK TP +YR Sbjct: 257 LETTTLSVSEIASRTGFESITYLGRVFKKYQHVTPAQYR 295 >UniRef50_C6CWR9 Two component transcriptional regulator, AraC family n=2 Tax=Paenibacillus RepID=C6CWR9_PAESJ Length = 540 Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 36/130 (27%), Positives = 68/130 (52%) Query: 261 LQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEK 320 L +++ + + +STD + ++ ++ +A ++ + + + V++ VG+S S Sbjct: 405 LLSVILQVTKAVAEKSTDKKKQSERSMAEAKSFLGRNLYRDLSVEEAATHVGLSTSYFSL 464 Query: 321 RFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTP 380 FK+ ET + E++EKA+SLL T SI +I++ GY +YF VF K P Sbjct: 465 LFKQTYNETFIEYVTRERMEKAKSLLADTMKSIAQIAKEVGYAERRYFTKVFMKYTGENP 524 Query: 381 KEYRDVNSEV 390 +YR + +V Sbjct: 525 TDYRGKHQQV 534 >UniRef50_C6J4K9 Two component transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J4K9_9BACL Length = 403 Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 38/127 (29%), Positives = 72/127 (56%), Gaps = 8/127 (6%) Query: 266 VPPVRVIERRSTDYR-SLTDP-------AVIQAMHYIRNHACKGIKVDQVLDAVGISRSN 317 VP V + ++++D +L DP A+ A+ YI+ H + + +++V V ++ + Sbjct: 260 VPQVVMRMKQASDSPVALLDPPKGSGEKAIEVALQYIKEHYNEELSLEKVASVVFLNPAY 319 Query: 318 LEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYD 377 + FK++VG + + +LE+A+ LL++ L I EI++ GY +++F +F+K Y Sbjct: 320 FSQLFKQKVGLGYKEYVTSLRLEQAKQLLLNPKLKIAEIAEYLGYQDIRHFAQMFRKKYQ 379 Query: 378 TTPKEYR 384 TP EYR Sbjct: 380 VTPNEYR 386 >UniRef50_Q65NG7 Putative uncharacterized protein n=1 Tax=Bacillus licheniformis ATCC 14580 RepID=Q65NG7_BACLD Length = 400 Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 34/101 (33%), Positives = 60/101 (59%), Gaps = 1/101 (0%) Query: 285 PAVIQAMHYIRNHAC-KGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKAR 343 P VI+A Y++ H + + Q+ DA+ +S L + K+E+G T ++ ++++A Sbjct: 288 PVVIRAKEYMQKHFTEREFSLKQMADALQVSSVYLSRMMKKELGVTFVQLLTEMRMDQAV 347 Query: 344 SLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 LL +T LSI++I++ GY + YF +VFKK +P +YR Sbjct: 348 HLLETTPLSIHDIAEQTGYDTQHYFSTVFKKTMGVSPNQYR 388 >UniRef50_A0L3B8 Transcriptional regulator, AraC family n=2 Tax=Gammaproteobacteria RepID=A0L3B8_SHESA Length = 311 Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 40/130 (30%), Positives = 67/130 (51%), Gaps = 4/130 (3%) Query: 264 ILVPPVRVIERRSTD----YRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLE 319 I V +R+ +S ++ + +P + + + I + K +D + G+SR+N Sbjct: 180 IFVQALRIHMYKSNKNAGFFKLIENPQLSKTLEAIHHSLDKKWGLDDLAGIAGMSRTNYS 239 Query: 320 KRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTT 379 +FKE G T + +LEKA+ LL + S+ E+S+ GYP+ ++F +FKK T Sbjct: 240 VKFKELSGMTPLDYLTYCRLEKAKQLLKESGKSVPEVSEAIGYPAHEHFQKLFKKKIGKT 299 Query: 380 PKEYRDVNSE 389 P YR NSE Sbjct: 300 PSAYRKENSE 309 >UniRef50_C6D787 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D787_PAESJ Length = 267 Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 34/88 (38%), Positives = 51/88 (57%) Query: 296 NHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINE 355 N+ + V +++AV + RS L + FKE G ++ + A ++E+AR LL+S+ LSI Sbjct: 170 NYWRTTLTVSDIVNAVSLERSYLFRLFKEASGMSVSGYMTAYRMERARELLMSSGLSIKS 229 Query: 356 ISQMCGYPSLQYFYSVFKKAYDTTPKEY 383 ++ GY YF VFKKA TP EY Sbjct: 230 VACSVGYKDQLYFSKVFKKATSYTPSEY 257 >UniRef50_C0CVY3 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CVY3_9CLOT Length = 529 Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 37/102 (36%), Positives = 52/102 (50%) Query: 284 DPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKAR 343 D + +A YIR + K I +++V VGIS K FKEE G + ++E A+ Sbjct: 422 DGIITRAQDYIRQNFRKDISLEEVARTVGISPYYFSKLFKEEAGMNFTEYLTGIRIETAK 481 Query: 344 SLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRD 385 LL LSI ++ GY + YF +FKK TP E+RD Sbjct: 482 RLLSERELSIKQVCVDSGYANPNYFSRIFKKWVGITPTEFRD 523 >UniRef50_C6CSB6 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CSB6_PAESJ Length = 544 Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 33/97 (34%), Positives = 50/97 (51%) Query: 293 YIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLS 352 YI N + IK+ D +SR + K FK++ G IH + +++KA+ LL +L Sbjct: 447 YIDNRYYEDIKISMFADKYFLSREYIMKLFKQQFGCGIHEYVQRIRMDKAKELLDDPSLK 506 Query: 353 INEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSE 389 I +IS+M GY YF F+ + +P EYR E Sbjct: 507 IQDISEMLGYKDKNYFSKAFRNYFSISPTEYRTARKE 543 >UniRef50_C4FNR5 Putative uncharacterized protein n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FNR5_9FIRM Length = 296 Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 44/152 (28%), Positives = 76/152 (50%), Gaps = 21/152 (13%) Query: 244 YQAAKLLHRLLD---------KEEMPLQRI--LVPPVRVIERRSTDYRSLTDPAVIQAMH 292 Y A K+L L++ EEMP +++ V R I R P + +AM Sbjct: 146 YSATKVLRILVEHYFPFNDAIAEEMPYEQLPDFVESERPINR----------PEIRKAML 195 Query: 293 YIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLS 352 YI + K + + ++ + + +S S K FK++ G ++ I ++++A+ LL+ + L+ Sbjct: 196 YIEKNLSKRVSLRRISEHIHLSESYFSKIFKDDTGLSVVQYITLLRIQEAKKLLVYSQLT 255 Query: 353 INEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 +N+IS+ GY YF +FK A TP YR Sbjct: 256 VNQISKTLGYNRTSYFCKIFKMATTETPHSYR 287 >UniRef50_C0A314 Transcriptional regulator, AraC family n=2 Tax=Opitutaceae bacterium TAV2 RepID=C0A314_9BACT Length = 319 Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 33/84 (39%), Positives = 50/84 (59%) Query: 301 GIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMC 360 G+ V ++ +G S ++L +RF E G T+ A I AE++ AR+ L + +I EI+ MC Sbjct: 216 GLTVARLAKDLGCSAAHLSRRFHGERGVTLAAWIVAERIALARTHLTNPRYNIAEIAWMC 275 Query: 361 GYPSLQYFYSVFKKAYDTTPKEYR 384 G+ S YF VF+K TP+ YR Sbjct: 276 GFTSPAYFIHVFRKHTSITPRAYR 299 >UniRef50_UPI0001C36936 two component transcriptional regulator, AraC family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C36936 Length = 527 Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 35/101 (34%), Positives = 57/101 (56%) Query: 285 PAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARS 344 P + +A+ YIR H + I + + + + + L + FKE+VG+T + ++E A+ Sbjct: 414 PVIDRALVYIREHYSENITLQSLAEDIYLHPVYLSRLFKEKVGQTFLEYLTHYRIEMAKD 473 Query: 345 LLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRD 385 L + L I +I QM GY + QYF VFK+ TTPK +R+ Sbjct: 474 YLRNPNLRIYDIGQMVGYETPQYFSRVFKELTGTTPKGFRE 514 >UniRef50_B0NHY9 Putative uncharacterized protein n=2 Tax=Clostridium RepID=B0NHY9_EUBSP Length = 507 Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 33/102 (32%), Positives = 56/102 (54%) Query: 287 VIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLL 346 V +A+ +I+ + +GI +++V + +S L +FK++ G T I ++E + LL Sbjct: 406 VQKAIQHIQEYYNQGITLEEVAAKLHVSEEYLSTQFKKQTGRTFTETIRKYRIENVKELL 465 Query: 347 ISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNS 388 + +TL +N+I+ M GY +Y VFK P EYR NS Sbjct: 466 LKSTLKLNQIADMVGYSDPKYMSKVFKDEVGMLPAEYRKKNS 507 >UniRef50_C1P7P5 Transcriptional regulator, AraC family n=1 Tax=Bacillus coagulans 36D1 RepID=C1P7P5_BACCO Length = 292 Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 32/101 (31%), Positives = 58/101 (57%) Query: 287 VIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLL 346 + QA+ YI+ H + + +++V V +S K FK+E GET + ++ +K+ A+ +L Sbjct: 188 IKQALQYIQKHIHQPVTLEEVAGHVYLSPYYFSKLFKKETGETFVSFVNRQKMNLAKDML 247 Query: 347 ISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVN 387 + L ++ I+ G+ + YF VFK+ Y TTP YR ++ Sbjct: 248 ANDDLPVSYIAHSLGFREISYFSKVFKRYYQTTPTSYRAMS 288 >UniRef50_Q7M9P2 BH0401 PROTEIN n=1 Tax=Wolinella succinogenes RepID=Q7M9P2_WOLSU Length = 292 Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 34/114 (29%), Positives = 66/114 (57%), Gaps = 4/114 (3%) Query: 272 IERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIH 331 +++ + +R+L A++YI ++ + + ++ G+S + + FKEE G+ ++ Sbjct: 1 MKKETKHFRALLAD---NALYYIYSNISAPLSLQELAKEAGVSAHHFHRIFKEEQGQNLY 57 Query: 332 AMIHAEKLEKARSLLISTTLS-INEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 I + +L+KA +LL+S S I+E++Q+CGY S F FK + TP+E+R Sbjct: 58 ETIKSIRLQKAANLLLSNHYSTISEVAQLCGYSSSASFIKAFKGRFHLTPREWR 111 >UniRef50_B0RRS5 Transcriptional regulator, AraC family n=5 Tax=Gammaproteobacteria RepID=B0RRS5_XANCB Length = 333 Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 32/104 (30%), Positives = 60/104 (57%) Query: 281 SLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLE 340 S D A+ + + ++R + +D + + V +SR + +RF + G T+ + AE+L Sbjct: 217 SPQDAALSRLLDFMRADLQQDHAMDALAERVAMSRRSFTRRFHKATGMTVGEWLGAERLR 276 Query: 341 KARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 +A+ LL ST LSI ++++ GY + F F +A+ T+P+E+R Sbjct: 277 RAKDLLESTALSIEQVAERSGYKTAVSFRQRFNQAFQTSPREWR 320 >UniRef50_A6TTZ3 Response regulator receiver protein n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TTZ3_ALKMQ Length = 245 Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 35/101 (34%), Positives = 56/101 (55%) Query: 284 DPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKAR 343 D + A YI ++ + I++ V + VG+S + K FK + ++ ++EKA+ Sbjct: 139 DHVIKGAKEYIEDNYSEKIQLKDVANHVGLSPTYFSKFFKRKTQMNFSIYLNMARIEKAK 198 Query: 344 SLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 L+ TTL++NEIS GY L YF VF+K +TP +YR Sbjct: 199 ELMRETTLTLNEISYRVGYEDLSYFSIVFQKYEASTPSDYR 239 >UniRef50_C6CVB2 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CVB2_PAESJ Length = 542 Score = 65.1 bits (157), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 34/93 (36%), Positives = 53/93 (56%) Query: 293 YIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLS 352 +I + K + + + D V + L K +K E GE + ++ ++EKA LL +T Sbjct: 444 FIDANLAKDVSLPAIADHVHLHPVYLSKIYKAETGEPLTEYVYRLRMEKAAFLLRTTPSK 503 Query: 353 INEISQMCGYPSLQYFYSVFKKAYDTTPKEYRD 385 + EIS++ GY + YF VFKK +D TP+EYRD Sbjct: 504 VFEISEIVGYNNTAYFIRVFKKFFDVTPQEYRD 536 >UniRef50_A8SRM1 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SRM1_9FIRM Length = 296 Score = 65.1 bits (157), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 33/98 (33%), Positives = 55/98 (56%) Query: 287 VIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLL 346 V A+ YI+NH +KV+++ D VGI+RS FK+ G + + ++ KA+ +L Sbjct: 171 VNHAISYIQNHYSMPMKVEELSDYVGINRSYFSDLFKQYTGMSPVKYLQNFRITKAQHML 230 Query: 347 ISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 + LS+ I+ CGY S + F+ +F+K +P YR Sbjct: 231 TISELSVESIAFSCGYQSAEAFHKIFRKTTGLSPNAYR 268 >UniRef50_A8EWB5 Transcriptional regulator, AraC family n=4 Tax=Campylobacterales RepID=A8EWB5_ARCB4 Length = 292 Score = 65.1 bits (157), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 36/97 (37%), Positives = 59/97 (60%), Gaps = 1/97 (1%) Query: 290 AMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLIST 349 M+YI + I +D++ + IS+ +L + FKEE G+ I+ I + +LEKA +LLI+ Sbjct: 16 VMNYIYKYIDTNINIDELCLELKISKFHLHRIFKEEFGKNIYESIKSIRLEKAANLLITN 75 Query: 350 TLS-INEISQMCGYPSLQYFYSVFKKAYDTTPKEYRD 385 S I +I++M GY S F FK+ + TPKE+++ Sbjct: 76 RYSTITDIAKMTGYSSQTSFLRSFKQRFLMTPKEWKN 112 >UniRef50_C8WH60 Transcriptional regulator, AraC family n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WH60_EGGLE Length = 345 Score = 65.1 bits (157), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 28/101 (27%), Positives = 57/101 (56%) Query: 286 AVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSL 345 ++ +A+ YI N+ I+ +L+A + + +K FK+ G T+ + +E++E A+ L Sbjct: 214 SIARAVSYIENNLGGAIRQKDLLEAANMGSTKFKKTFKQVTGLTVTEFVSSERIELAKRL 273 Query: 346 LISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDV 386 L +SI+E++ CGY F ++F K+ P+++R + Sbjct: 274 LTDHDMSIDEVAHRCGYARATSFSALFAKSVGMPPRKWRSI 314 >UniRef50_A7B8B1 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B8B1_RUMGN Length = 352 Score = 65.1 bits (157), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 35/101 (34%), Positives = 56/101 (55%) Query: 283 TDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKA 342 TD + + YIRNH + + + + +AV +S S L + +K + GE + I++ ++EKA Sbjct: 244 TDTLLKRVQTYIRNHYTERLTLADIAEAVHVSSSYLSRFYKLKAGENLFDTINSLRVEKA 303 Query: 343 RSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEY 383 + LL+ I EI+ + G+ YF VFKK PKEY Sbjct: 304 KELLLRGDKKIYEIAALTGFEDTAYFSKVFKKYAGCPPKEY 344 >UniRef50_A7B2G1 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B2G1_RUMGN Length = 394 Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 35/97 (36%), Positives = 57/97 (58%) Query: 289 QAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLIS 348 Q YIR + + I + + +A+G+S S+L + FK+E GE+I ++E+A +LL Sbjct: 285 QCKEYIRKYYHQKICIPDIAEALGVSESHLSRIFKKETGESIQKYSMHMRIERAENLLKY 344 Query: 349 TTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRD 385 + S+ EIS+ + S +F VFK + TPK+YRD Sbjct: 345 SEASLTEISEYLCFSSQSHFGKVFKVYKNMTPKQYRD 381 >UniRef50_A0Y392 Transcriptional regulator, AraC family protein n=1 Tax=Alteromonadales bacterium TW-7 RepID=A0Y392_9GAMM Length = 316 Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 33/106 (31%), Positives = 58/106 (54%) Query: 279 YRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEK 338 Y S D + + +I NH+ I + ++ S NL++RF + G +I+ + + Sbjct: 208 YSSHRDEKISEVQDWIYNHSSSVITIVELAKYFNFSERNLKRRFTQATGISINRYVQEVR 267 Query: 339 LEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 ++KA+ LL+ST ++NEIS GY + +F +FKK TP ++R Sbjct: 268 IDKAKKLLLSTDKTVNEISINVGYENSSFFTRLFKKNTGITPAKWR 313 >UniRef50_C2FPL8 Transcription regulator n=2 Tax=Lactobacillus plantarum RepID=C2FPL8_LACPL Length = 266 Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 32/101 (31%), Positives = 62/101 (61%) Query: 287 VIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLL 346 V ++YI NH + ++ + +L+ + + +++F++E+G TI+ I KL++A+ LL Sbjct: 159 VALVVYYIDNHCDEPLRANTILEELTLDPEYTKRKFRKELGFTINFYIRHAKLQRAKQLL 218 Query: 347 ISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVN 387 I+T L I EI++ + + F F+K +D TP +YR++N Sbjct: 219 INTHLPIGEIAERINFYNSAEFARQFQKEFDITPSKYRELN 259 >UniRef50_B7DU32 Transcriptional regulator, AraC family n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DU32_9BACL Length = 334 Score = 64.7 bits (156), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 32/99 (32%), Positives = 59/99 (59%), Gaps = 1/99 (1%) Query: 287 VIQA-MHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSL 345 +IQA + YI++H + + ++ +S +L F++E+G T+ A I + +L+KAR L Sbjct: 227 IIQAAVDYIQSHLADELSLTRIAVYCSVSTYHLSHLFRKEMGMTLTAFIKSLRLKKAREL 286 Query: 346 LISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 L++++L+++EI+ G+ YF F+ Y P EYR Sbjct: 287 LLNSSLTVSEIAYQVGFSDPNYFSKTFRVTYGLPPSEYR 325 >UniRef50_UPI0001788513 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788513 Length = 759 Score = 64.7 bits (156), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 35/93 (37%), Positives = 55/93 (59%), Gaps = 1/93 (1%) Query: 293 YIRNHACK-GIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTL 351 Y+R H + + ++QV V +SRS + K FK + + ++A +LEKAR LL ST Sbjct: 656 YVRKHYARPDMSLEQVAGEVKLSRSYVGKLFKAHCELSFNDYLNAVRLEKARELLASTEE 715 Query: 352 SINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 S+ IS+ G + YFY++FKK Y +P ++R Sbjct: 716 SVQSISEQVGILNTTYFYTLFKKHYQISPAQFR 748 >UniRef50_D0I8W0 Transcriptional regulator AraC family n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0I8W0_VIBHO Length = 231 Score = 64.7 bits (156), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 30/92 (32%), Positives = 52/92 (56%) Query: 293 YIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLS 352 YIR H + I V Q+ +V ++ S + FK +VG T H + ++ E A+ LL+S+ L+ Sbjct: 137 YIRQHISRKITVAQLAGSVFLAESQFHQLFKAQVGVTPHQYVLKKRFELAQDLLVSSELN 196 Query: 353 INEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 + +IS CG+ S F + F + + +P +R Sbjct: 197 LAQISDSCGFSSQSGFTTAFTRYFGISPSRFR 228 >UniRef50_B0NF43 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NF43_EUBSP Length = 519 Score = 64.7 bits (156), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 34/98 (34%), Positives = 56/98 (57%) Query: 287 VIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLL 346 + + YI + +GI V ++ +G+S S L + FK+E G TI I+ +K++KA+ L Sbjct: 416 IYECEKYIDENYERGITVSEISRYIGVSMSYLSRIFKDETGNTIINYINEKKIQKAKEYL 475 Query: 347 ISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 T + I EI++ G+ + YF FKK +PKEY+ Sbjct: 476 GGTDMKIYEIAEKLGFENTTYFSYFFKKYTGISPKEYK 513 >UniRef50_A5KPH1 Putative uncharacterized protein n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KPH1_9FIRM Length = 516 Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 28/100 (28%), Positives = 56/100 (56%) Query: 285 PAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARS 344 P + +A+ ++ +GI ++++ D + +S L +FK+E+G M+ ++E+ + Sbjct: 412 PLIQKALQMVKKEYDQGITLEEMADKLFVSEEYLSSQFKKEIGVGFKEMVRTLQIERIKE 471 Query: 345 LLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 LL +T L +N+I+++ GY +Y VFK P E+R Sbjct: 472 LLTNTKLKLNQIAELAGYSDAKYMSRVFKDEVGVLPSEFR 511 >UniRef50_UPI00017885E1 two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI00017885E1 Length = 513 Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 40/116 (34%), Positives = 59/116 (50%), Gaps = 3/116 (2%) Query: 269 VRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGE 328 +R +E R D + V Q I + I ++ + D V +S + L FKE+ G Sbjct: 398 IRTLEHRFMDKNA---RLVHQVRTTIDQTFHQAITINSLSDQVYLSPNYLRSIFKEKTGM 454 Query: 329 TIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 TIH + +L KA+ LL +L + +I+Q GY S YF S+F K+ TP EYR Sbjct: 455 TIHDYLTKIRLNKAKELLADDSLKVQDIAQRVGYESTSYFISLFLKSQGVTPNEYR 510 >UniRef50_A4BFF7 Putative uncharacterized protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BFF7_9GAMM Length = 324 Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 32/103 (31%), Positives = 54/103 (52%) Query: 284 DPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKAR 343 D V ++R+H + I + Q+ G S + +RF E E+ + +LE+AR Sbjct: 213 DEIVSLVQSWVRSHLNEPISLAQLAAVAGQSERQIRRRFSEATKESPMQYVQKVRLEEAR 272 Query: 344 SLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDV 386 +LL T LS+ EI+ CG+ + YF VF+++ + EYR + Sbjct: 273 ALLRETNLSVTEIASSCGFTGVAYFARVFRQSTGMSAGEYRQM 315 >UniRef50_UPI00017896CE two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI00017896CE Length = 261 Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 33/103 (32%), Positives = 58/103 (56%) Query: 287 VIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLL 346 V A+ YI H + + ++++ + +GIS S FK VG T + +++E A+ LL Sbjct: 156 VSSALEYINTHMGQDLGIEELSEHLGISSSYFCLLFKNHVGLTFVEYLTRQRMEAAKFLL 215 Query: 347 ISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSE 389 +++ +I +I GY +YF VF+KA TP E+R+++ E Sbjct: 216 VNSDKNIAQIGSFVGYHERRYFTKVFQKATGMTPSEFREMSGE 258 >UniRef50_C7IHS7 Transcriptional regulator, AraC family n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IHS7_9CLOT Length = 761 Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 39/133 (29%), Positives = 71/133 (53%), Gaps = 4/133 (3%) Query: 254 LDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGI 313 LD+ + L I + + E+ + ++ +++ + YI + K I ++ + + VG+ Sbjct: 630 LDEASLFLSNIYLQIIEYNEKFKVEGKT----HIMKILDYIHENYKKDIAINTLAEHVGL 685 Query: 314 SRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFK 373 S S++ K F +E GE I I+ ++E+A+ LL T ++IN+I+ GY + Q F FK Sbjct: 686 SYSHVRKIFNDETGENIVNYINNMRIEEAQRLLRQTNMNINDIALSLGYNNKQSFNRFFK 745 Query: 374 KAYDTTPKEYRDV 386 K P EYR + Sbjct: 746 KYVGINPGEYRSI 758 >UniRef50_C6IPT3 Transcriptional regulator n=3 Tax=Bacteroides RepID=C6IPT3_9BACE Length = 286 Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 34/103 (33%), Positives = 59/103 (57%) Query: 282 LTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEK 341 L D + +A+HYIR H + I + + + +S+ + + FK+E G+T I+ +K+EK Sbjct: 179 LKDNRIEEAIHYIRKHINETIDLRVLAENSCLSKDHFIRLFKKETGDTPLKYINRKKIEK 238 Query: 342 ARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 A+ +LI+ +SI ++ + YF +FKK TP+EYR Sbjct: 239 AQLILITDDMSIKNVALNLAFEDYSYFNRLFKKITGITPQEYR 281 >UniRef50_B3PDH3 Transcriptional regulator, AraC family n=2 Tax=Gammaproteobacteria RepID=B3PDH3_CELJU Length = 335 Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 33/101 (32%), Positives = 55/101 (54%) Query: 284 DPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKAR 343 D + Q +++++ + I + QV + G+S L +RFK +G+T + ++ AR Sbjct: 224 DEEITQIQIWLQDNYHRDIHMPQVAERFGMSLRTLNRRFKNALGKTPLTFLQEIRINTAR 283 Query: 344 SLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 LL ++ LS+ EI+ GY YF +FKK T+P EYR Sbjct: 284 DLLKTSNLSLGEIADKIGYQDAGYFTQLFKKHLATSPNEYR 324 >UniRef50_B7RVF1 Transcriptional regulator, AraC family n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RVF1_9GAMM Length = 351 Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 34/102 (33%), Positives = 52/102 (50%) Query: 283 TDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKA 342 TD + AM+YI ++ K + V+ + V +S++ L FK G T+ + ++ KA Sbjct: 233 TDSRITNAMNYINSNLEKSLTVEDIAQHVQLSKTRLSSMFKARTGSTLISWREERRIAKA 292 Query: 343 RSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 LL TTL I EIS+ GY YF F + +P+ YR Sbjct: 293 SRLLTRTTLQIQEISKQIGYEDPLYFSRTFSRLVGCSPRIYR 334 >UniRef50_B8I0K9 Two component transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=B8I0K9_CLOCE Length = 532 Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 39/116 (33%), Positives = 60/116 (51%), Gaps = 1/116 (0%) Query: 270 RVIERRSTDYRSLTDPAVIQAMHYIR-NHACKGIKVDQVLDAVGISRSNLEKRFKEEVGE 328 +++E R T D + +A YI+ N + I ++ V V +S S+ F +E GE Sbjct: 414 KILEFRDTRVEKKYDSIINKAKEYIQSNFSNSAISLNSVSSYVNVSPSHFSTIFSQEAGE 473 Query: 329 TIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 + +++KA LL +T+L +EI+ GY YF +FKKA TPKEYR Sbjct: 474 NFIEYLTKVRVKKAMELLKTTSLKSSEIAYSVGYNDPHYFCYIFKKAIGVTPKEYR 529 >UniRef50_C5ETL2 Two component transcriptional regulator n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ETL2_9FIRM Length = 517 Score = 64.3 bits (155), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 35/121 (28%), Positives = 63/121 (52%), Gaps = 7/121 (5%) Query: 264 ILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFK 323 +L P R+ E +++ + +A++YIR H +GI +++V +GI+ L F Sbjct: 402 LLCSPRRMKE-------DISNYTIKRAINYIREHYKEGISLEEVAGRLGITPEYLSTLFN 454 Query: 324 EEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEY 383 E+GE + ++ A+ LL T + + EI++ GY +YF VFK+ +P +Y Sbjct: 455 REMGENFSTFLRKFRISHAKRLLKGTDMKVYEIAEEVGYTDPKYFARVFKEELGISPGDY 514 Query: 384 R 384 R Sbjct: 515 R 515 >UniRef50_B5YFJ6 Transcriptional regulator, putative n=2 Tax=Dictyoglomus RepID=B5YFJ6_DICT6 Length = 287 Score = 64.3 bits (155), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 38/116 (32%), Positives = 66/116 (56%), Gaps = 1/116 (0%) Query: 273 ERRSTDYR-SLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIH 331 ERR+ D R + ++YI + K + +D++ V +S+ L + FKE + + Sbjct: 171 ERRNQDGRLGYKIERIKDVLNYINQNYNKNLSLDELSRQVDMSKFYLCRLFKESLRMSPV 230 Query: 332 AMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVN 387 I+ +++KA LLI+T +S++EI+ CG+ ++ YF VFKK TTP ++R N Sbjct: 231 EYINKVRVDKAMELLINTDMSVSEIAFECGFDNISYFIKVFKKYMHTTPLKFRKQN 286 >UniRef50_C0ZDD0 Probable transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZDD0_BREBN Length = 298 Score = 64.3 bits (155), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 34/104 (32%), Positives = 58/104 (55%) Query: 287 VIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLL 346 + +A+ +I+ H + I + + +A G+SR L F+E + T I ++EKA LL Sbjct: 187 ISEAVCFIQAHYKETISLGDIANAAGLSRYYLINLFREYLNTTPLQYITKLRIEKAMDLL 246 Query: 347 ISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSEV 390 T LS+N+I+ GY + YF VFKK T+P ++R+ + + Sbjct: 247 TQTNLSVNDIALAIGYANANYFNKVFKKLIGTSPGQFRECKNSL 290 >UniRef50_C6IY41 Predicted protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IY41_9BACL Length = 738 Score = 64.3 bits (155), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 36/100 (36%), Positives = 55/100 (55%), Gaps = 1/100 (1%) Query: 288 IQAMHYIRNHACK-GIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLL 346 +QA HYI H G+ + QV D + + S L FKEE+GE + ++++A+ LL Sbjct: 635 MQAKHYIDAHFTDPGLSLVQVSDYLNLQPSALSVIFKEEIGEKFVDYVLKVRMQQAKQLL 694 Query: 347 ISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDV 386 + T SI ++ GY ++ FY FKK D P EYR++ Sbjct: 695 LETEDSIQSVAINSGYQNVNSFYRAFKKFQDIPPGEYRNM 734 >UniRef50_P43461 Uncharacterized HTH-type transcriptional regulator in cgkA 5'region (Fragment) n=1 Tax=Pseudoalteromonas carrageenovora RepID=YCGK_ALTCA Length = 166 Score = 64.3 bits (155), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 36/103 (34%), Positives = 60/103 (58%), Gaps = 2/103 (1%) Query: 282 LTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEK 341 + + V AM YI N+ I +D V +VG+SRS L K+FK +TI+ I ++E+ Sbjct: 61 INNCVVQNAMLYIENNYFNDINIDTVAFSVGVSRSYLVKQFKLATNKTINNRIIEVRIEQ 120 Query: 342 ARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 A+ +L+ S+ E + G+ + YF +VFKK + TPK+++ Sbjct: 121 AKKVLLKK--SVTETAYEVGFNNSNYFATVFKKRTNYTPKQFK 161 >UniRef50_C5EPJ4 Predicted protein n=2 Tax=Clostridiales RepID=C5EPJ4_9FIRM Length = 240 Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 38/141 (26%), Positives = 72/141 (51%), Gaps = 9/141 (6%) Query: 244 YQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIK 303 ++ A L RLLD + VR + + ++ +A+ YI N+ + I Sbjct: 109 FEVAACLERLLD---------IKAEVRTVNGSGKTEAADDGGSIGKAIQYIENNFYRSIS 159 Query: 304 VDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYP 363 +++V AV ++ + FK++ G+ + ++EKAR L+++T L I I++M GY Sbjct: 160 LEEVSQAVHMNTAYFSTLFKKQTGKKYIDYVTDLRMEKARKLILNTDLKIGAIAEMVGYG 219 Query: 364 SLQYFYSVFKKAYDTTPKEYR 384 S ++F ++K+ + TTP R Sbjct: 220 STKHFTRIYKEKFGTTPNADR 240 >UniRef50_UPI0001C373B4 transcriptional regulator, AraC family protein n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C373B4 Length = 248 Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 35/97 (36%), Positives = 56/97 (57%) Query: 289 QAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLIS 348 + + YI +H + + V + +AVG+ + L K F +E G TI I+ K++ A++LL Sbjct: 143 KCIDYIYDHLHEDLTVKTLAEAVGLESTYLSKLFSKETGTTIRHFINKAKIDTAQNLLKY 202 Query: 349 TTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRD 385 + S +EIS G+ S F SVFKK TP++YR+ Sbjct: 203 SDHSCSEISFALGFSSQSAFISVFKKGTGLTPRQYRE 239 >UniRef50_A7LYG4 Sensor protein n=7 Tax=Bacteroides RepID=A7LYG4_BACOV Length = 1317 Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats. Identities = 29/79 (36%), Positives = 49/79 (62%) Query: 307 VLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQ 366 + + VG+S++ L ++FKE + +T + +LE A LL +T L+++EI CG+ + Sbjct: 1238 IAEFVGVSKATLYRKFKEIIDKTPSEFVRGIRLEYAAKLLRTTKLTVSEIMFKCGFSNKS 1297 Query: 367 YFYSVFKKAYDTTPKEYRD 385 YFY F K Y +PK+YR+ Sbjct: 1298 YFYREFLKQYGVSPKDYRN 1316 >UniRef50_UPI0001C36F4C ggdef domain n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C36F4C Length = 567 Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 42/137 (30%), Positives = 67/137 (48%), Gaps = 7/137 (5%) Query: 252 RLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIR----NHACKGIKVDQV 307 R + E+ L R L +R+ + SL + Q M +R N VD++ Sbjct: 426 RFIANTEIALDRQLYTEIRISDDTP---HSLRQKEIRQKMTELRQKLMNEPELSWTVDKM 482 Query: 308 LDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQY 367 +G+ RS ++K +K G++I + ++E A+ LL TTLS+ EI+ CGY + Y Sbjct: 483 SRTIGMGRSTIQKHYKSCFGKSIFEELIQFRVELAKRLLKDTTLSLTEITVRCGYSTESY 542 Query: 368 FYSVFKKAYDTTPKEYR 384 F FK +TP E+R Sbjct: 543 FMKQFKNVTGSTPTEFR 559 >UniRef50_B3EYL7 Two-component response regulator n=5 Tax=Firmicutes RepID=B3EYL7_BACST Length = 404 Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 60/105 (57%), Gaps = 1/105 (0%) Query: 281 SLTDPAVIQAMHYIRNHACKG-IKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKL 339 S P V +A YI+ H + + ++ V + + +S L + K+E+G + ++ ++ Sbjct: 290 SRLSPIVRRARQYIQKHFSQSDLTLESVAEFLNVSPVYLSRMIKQELGISFIHLLTKIRM 349 Query: 340 EKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 EKA LL+ST L I+EI++ GY + YF + FKKA +P +YR Sbjct: 350 EKAAELLLSTELPIHEIAERVGYDTQHYFSTAFKKAMGVSPNQYR 394 >UniRef50_C5EPK7 Two-component response regulator n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EPK7_9FIRM Length = 289 Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 32/98 (32%), Positives = 53/98 (54%) Query: 287 VIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLL 346 V QA+ Y+ + + I + V D + +S S+ K FK+E G + + K+E AR LL Sbjct: 176 VSQAISYVDRNINRNISLSDVCDELLVSMSHFSKCFKKETGAGFSSYVTMMKMENARILL 235 Query: 347 ISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 + +NE+++M GY YF+ VFKK + P + + Sbjct: 236 RNPKNRVNEVARMLGYSDYAYFFQVFKKQFGYAPSDIK 273 >UniRef50_A9U7E9 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U7E9_PHYPA Length = 399 Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 37/116 (31%), Positives = 63/116 (54%), Gaps = 1/116 (0%) Query: 269 VRVIERRSTDYRSLTDPAVIQ-AMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVG 327 V+ I RR T +L ++ + YI H + I + V D V IS++ L F++ G Sbjct: 281 VKRICRRFTPNENLKHKETVEFIIQYIHEHYAENIHLQDVADQVYISKNYLSTLFRQFTG 340 Query: 328 ETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEY 383 ET + ++EKA+S+++ L I EI++ GY ++ YF ++FKK +P E+ Sbjct: 341 ETFGDYLTRVRMEKAKSMVLEKKLLIAEIAERVGYRNVPYFTTLFKKHTGRSPTEF 396 >UniRef50_C6LF57 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LF57_9FIRM Length = 309 Score = 63.9 bits (154), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 37/121 (30%), Positives = 63/121 (52%) Query: 269 VRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGE 328 ++ I +R + TDP V + YI H + + +++ G+S S L + FK E+G+ Sbjct: 188 MKYIRKRVLASQKDTDPRVQMVVDYITLHPEENLTREKLCTMTGVSESTLRRLFKAEMGK 247 Query: 329 TIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNS 388 +I+ K+ A LL++T SI+EI GY S YF F++ + +P+ YR + Sbjct: 248 SIYEFTKDTKMMYAAHLLMTTMESISEIGYRLGYESPSYFTRRFRENFGVSPQTYRKNSR 307 Query: 389 E 389 E Sbjct: 308 E 308 >UniRef50_C6LLK3 Putative two-component response regulator n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LLK3_9FIRM Length = 531 Score = 63.9 bits (154), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 37/103 (35%), Positives = 54/103 (52%) Query: 283 TDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKA 342 ++ V +A Y++ + + I +D V V +S K FKEE GE + ++ KA Sbjct: 425 SESLVEKARSYMQENYSREISLDDVSKEVNVSPYYFSKIFKEESGENFTEYLTNIRIGKA 484 Query: 343 RSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRD 385 + LL + LSI EI M GY YF +FKK TP+EYR+ Sbjct: 485 KELLENPELSIKEIGVMSGYTDPNYFSRIFKKHTGITPREYRE 527 >UniRef50_A7B1D9 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B1D9_RUMGN Length = 508 Score = 63.9 bits (154), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 31/98 (31%), Positives = 56/98 (57%) Query: 287 VIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLL 346 V QA IR + +GI ++++ + + +S L +FK+E G T I ++EK + LL Sbjct: 407 VKQAKKLIRKYYDQGITLEEIANKLYVSEEYLSAQFKKETGSTFTETIRKYRIEKVKELL 466 Query: 347 ISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 ++T L +N+I+++ GY +Y VFK+ P ++R Sbjct: 467 LNTHLKLNQIAELAGYSDPKYMSKVFKEEVGMLPNDFR 504 >UniRef50_C6J569 Transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J569_9BACL Length = 344 Score = 63.9 bits (154), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 50/180 (27%), Positives = 87/180 (48%), Gaps = 9/180 (5%) Query: 214 CVIGIDNEELTRYLSRV-ALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVI 272 C+ +D + + R A+S + R + Q + LL +E + +IL+ VRV+ Sbjct: 153 CITSLDRLPIAPVVDRFHAMSGFLEAYRILEEQPIGF-YTLLKQE---IVQILLRTVRVL 208 Query: 273 ER----RSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGE 328 +R R R ++ A YI+++ I ++QV +A+GIS L++ F+ E Sbjct: 209 DRADDRRGIPERDMSFHRYKLATQYIQDNESMPISLEQVAEAIGISPRQLQRIFRSEGRT 268 Query: 329 TIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNS 388 T + +L S L+ T +I EI+ G+ + Y Y VFK Y+ TP YR +++ Sbjct: 269 TFRDYLEHTRLTAICSDLLLTDKAIEEIAIAHGFANPNYLYPVFKSKYEVTPSAYRKMHA 328 >UniRef50_B0NX83 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0NX83_9CLOT Length = 539 Score = 63.9 bits (154), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 37/126 (29%), Positives = 68/126 (53%), Gaps = 6/126 (4%) Query: 261 LQRILVPPVRV-IERRSTDYRSLTDPAVIQAMHYI-RNHACKGIKVDQVLDAVGISRSNL 318 ++ +++ +R+ ER + SL + +A +I +N+ + + + V D VG+S S+ Sbjct: 414 IEELIIQAIRMRNERLGKKHSSL----ITEAKEFIVKNYQEETLSLSDVADQVGLSSSHF 469 Query: 319 EKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDT 378 FK+E GE+ + + +++KA+ +L T + ++IS GY YF +FKK Sbjct: 470 STTFKQETGESFVEFLTSVRMDKAKEMLCFTDMKASQISYEVGYKDPHYFSYLFKKTQGC 529 Query: 379 TPKEYR 384 TP EYR Sbjct: 530 TPSEYR 535 >UniRef50_A7LV24 Sensor protein n=2 Tax=Bacteroides RepID=A7LV24_BACOV Length = 1411 Score = 63.9 bits (154), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 30/83 (36%), Positives = 50/83 (60%) Query: 302 IKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCG 361 +KVD++ + +G SRSNL ++ K ++ +I ++LE A +L T ++I EI+ G Sbjct: 1315 LKVDKICEEMGFSRSNLYRKLKAITDLPLNDLIRHKRLEIATQMLKQTEMNITEIATATG 1374 Query: 362 YPSLQYFYSVFKKAYDTTPKEYR 384 + +L YF FK AY +P EY+ Sbjct: 1375 FSTLAYFTKCFKSAYGVSPSEYQ 1397 >UniRef50_C6CTB8 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CTB8_PAESJ Length = 530 Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 35/101 (34%), Positives = 53/101 (52%) Query: 284 DPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKAR 343 D + Y+R H + + + V D I + KRFK+ VG + + + ++E+++ Sbjct: 429 DDIIDSVQQYVRQHYNEELSLQWVSDKYFIHPNYFSKRFKQIVGISYNDYVTRVRIERSK 488 Query: 344 SLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 LL +TTL I ISQ+ GY YF SVFKK +P YR Sbjct: 489 ELLKTTTLKIARISQLVGYEDQGYFCSVFKKVTGVSPSAYR 529 >UniRef50_Q15WQ5 Transcriptional regulator, AraC family n=3 Tax=Alteromonadales RepID=Q15WQ5_PSEA6 Length = 248 Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 39/115 (33%), Positives = 61/115 (53%), Gaps = 2/115 (1%) Query: 270 RVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGET 329 R +E+ S S+ A+ M +IR H + + + ++ +S S LE+RFK+ +G T Sbjct: 132 RHLEKTSVALNSM--DALKTPMSHIRQHYMQNLSMQELASLSHLSISALERRFKKYLGLT 189 Query: 330 IHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 I +LE AR LL+ TTL IN I+ G+ YF F + ++T P E+R Sbjct: 190 PRHYIIQVRLENARRLLVETTLPINVIAAEVGFQDASYFSRKFYQLFETKPSEFR 244 >UniRef50_C6IZ62 Transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IZ62_9BACL Length = 293 Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 34/100 (34%), Positives = 56/100 (56%) Query: 286 AVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSL 345 +V +A + ++ + I +DQ+ + VG+S+ +L +RF + G T A + + EKA L Sbjct: 181 SVKRAAELMESNYAQMISIDQLSEHVGLSKYHLIRRFSDSTGLTPGAYLTRVRTEKAMDL 240 Query: 346 LISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRD 385 L T+LSI I++ GY S YF F++ TP E+R Sbjct: 241 LRGTSLSIETIAERVGYSSGSYFIKAFRRLTGLTPGEFRS 280 >UniRef50_C0CYV6 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C0CYV6_9CLOT Length = 410 Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 32/96 (33%), Positives = 51/96 (53%) Query: 289 QAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLIS 348 + + Y H + + + D +++S L F++E G T+ IHA +L A LL S Sbjct: 309 RCITYTDFHYAEPLTLSFFADMCHVTKSYLSNLFRKETGSTLTDYIHAVRLRHALVLLNS 368 Query: 349 TTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 TT+ I ++ CGY L YF +FK+ +PK+YR Sbjct: 369 TTIPIQVVAASCGYSDLNYFIKLFKRENGISPKQYR 404 >UniRef50_C9KYS9 Transcriptional regulator n=7 Tax=Bacteroides RepID=C9KYS9_9BACE Length = 312 Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 49/179 (27%), Positives = 76/179 (42%), Gaps = 14/179 (7%) Query: 211 EKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVR 270 +++ +GI NEEL SR + A Y + +LH ++ + Sbjct: 147 QQILEVGI-NEELVSLFSRALAVAEADKISAQQYLSGIVLH-------------IIGMIL 192 Query: 271 VIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETI 330 I + S D + QA + + + +++ + IS S + FKE G Sbjct: 193 SISKNKVFEMSDVDQKIEQAKIIMNENVSGNVDPEELAMRLNISYSWFRRVFKEYTGYAP 252 Query: 331 HAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSE 389 KL KA+ LL+ T+ S+ EIS G+ S +YF+S FKK TP EYR E Sbjct: 253 AKYFQELKLRKAKQLLVGTSQSVKEISFFLGFQSTEYFFSFFKKRTGLTPLEYRSFGRE 311 >UniRef50_C4L0K1 Transcriptional regulator, AraC family n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L0K1_EXISA Length = 259 Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 1/120 (0%) Query: 271 VIERRSTDYRSLTDPAVI-QAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGET 329 +++R D S P V+ + M +I H KV V DAVG+S S FKE G T Sbjct: 136 MLDRSIQDVHSQARPPVVSRMMRFIEAHVTSDFKVSDVADAVGLSVSRTVHLFKEGTGMT 195 Query: 330 IHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSE 389 I + +L+ A + T S+ I+++ G+ S YF+ +FK+ Y P YR + + Sbjct: 196 IIEYAQSIRLQLAEEQMRYTKHSLETIAELSGFRSYPYFHRIFKRKYGVAPGVYRTLQQK 255 >UniRef50_UPI0001788A1B transcriptional regulator, LacI family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788A1B Length = 338 Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 58/182 (31%), Positives = 83/182 (45%), Gaps = 4/182 (2%) Query: 97 HYIATDNYALVESAFLHLKEKGVNRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVV 156 H + DN A +L KG R A P S + +R +RQ + EE G Sbjct: 160 HSVNADNEQGAYEAVKYLIGKGHRRIALI-TPCSLEVDASLDRYNGYRQAM-EELGDGFD 217 Query: 157 YQGLETAPENWQHAQNRLADWLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVI 216 + +E L T IIA D A +++ + L VPE L VI Sbjct: 218 ERLVEIGSFEEDSGYTETEKLLNRAERPTAIIAGRDVIASRVVEKAQELGYKVPEDLAVI 277 Query: 217 GIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKE-EMPLQRILVPPVRVIERR 275 G DN +++ L+R +++S+ RQMG +AAKLL +L+D E + +V P VIER Sbjct: 278 GFDNTAVSQ-LARPSITSIELPMRQMGLEAAKLLMQLIDGEIRFDDIQTIVLPCTVIERE 336 Query: 276 ST 277 ST Sbjct: 337 ST 338 >UniRef50_C6IY72 Response regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IY72_9BACL Length = 413 Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 34/120 (28%), Positives = 66/120 (55%), Gaps = 1/120 (0%) Query: 266 VPPVRVIERRSTDYRSLTDPAVIQAMHYIRNH-ACKGIKVDQVLDAVGISRSNLEKRFKE 324 +P V + + + + P V +A Y+ H + G+ ++ + A+ S + L + K+ Sbjct: 282 LPSVYRKAKSAVNKENAVSPLVRRAKQYMLEHFSNSGLTLEAMAQALQTSPAYLSRMIKQ 341 Query: 325 EVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 E+G T ++ + ++ +A LLI+T L+I EI++ GY + YF + FK+A +P +YR Sbjct: 342 ELGTTFNSYLTQLRIRRASRLLIATELTIAEIAEQVGYETQHYFSTAFKRATGLSPLQYR 401 >UniRef50_A8RYQ3 Putative uncharacterized protein n=5 Tax=Clostridium RepID=A8RYQ3_9CLOT Length = 564 Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 39/114 (34%), Positives = 60/114 (52%), Gaps = 3/114 (2%) Query: 270 RVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGET 329 R++ERR D R D Y+ H + I + Q +A+ IS+ L FK++ GE+ Sbjct: 444 RILERRR-DTR--VDKIAEMVREYVMEHYKERITLGQAAEALNISQGYLSTAFKKQSGES 500 Query: 330 IHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEY 383 + A K+EKA+ L+ S + E+S + G+ + YF VFKK +PKEY Sbjct: 501 FTNYVSAIKIEKAKELIASHQYMMYEVSDLLGFDTPFYFSKVFKKVTGMSPKEY 554 >UniRef50_UPI0001788A43 two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788A43 Length = 516 Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 32/104 (30%), Positives = 58/104 (55%) Query: 281 SLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLE 340 +L + V+QA+ YI+ + I + +V D V +SR+ + FK G + +L+ Sbjct: 408 TLHERIVLQAVRYIKARFTEPISLQEVADEVAVSRNYFSELFKRVTGHNFIDYVIDLRLK 467 Query: 341 KARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 +A+ LL +T+L + E++ G+ ++YF +FKK TP EY+ Sbjct: 468 RAKELLSTTSLRVYEVADRSGFNDVKYFSKLFKKMVGMTPAEYQ 511 >UniRef50_B4D591 Transcriptional regulator, AraC family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D591_9BACT Length = 310 Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 41/157 (26%), Positives = 81/157 (51%), Gaps = 12/157 (7%) Query: 234 SVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMH- 292 + A ++ Y +++L LLD +P R R I S D R + ++++++ Sbjct: 154 NAAHDTLEISYALSRVLLHLLDCPPLPTDR------RDIHS-SDDVRDV----ILESINK 202 Query: 293 YIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLS 352 Y+R + + + + + +G S S+L F++ +G ++ + +L +A LL S+ L+ Sbjct: 203 YVRANLGRAVTIADIAGELGYSVSHLRAVFRDRLGVSLGKYMRESRLSEAAQLLQSSGLN 262 Query: 353 INEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSE 389 +++I + CG+ SL F F+KAY P+ YR + E Sbjct: 263 VSDIGERCGFESLYAFSRAFRKAYGIPPRTYRQLVQE 299 >UniRef50_UPI0001C359BB two component transcriptional regulator, AraC family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C359BB Length = 108 Score = 63.2 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 34/104 (32%), Positives = 59/104 (56%) Query: 286 AVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSL 345 +V + M Y+ + + +D++ + V ++RS + FK+E G I+A + ++EKA+ L Sbjct: 4 SVFKIMQYMEARYAEPVTLDELANHVHMNRSYISHLFKKETGRNINAYLLEFRMEKAKIL 63 Query: 346 LISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSE 389 L S+ +I +I G P YF VFKK TP E+R +++E Sbjct: 64 LESSNHNIQDICCQIGIPDSAYFSKVFKKYTGFTPIEFRRISNE 107 >UniRef50_B7GJA8 Transcriptional regulator containing HTH domain, AraC family n=1 Tax=Anoxybacillus flavithermus WK1 RepID=B7GJA8_ANOFW Length = 281 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 30/106 (28%), Positives = 54/106 (50%) Query: 282 LTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEK 341 + DP + +A+ + A I + V G+S +RF+ VG + + +L K Sbjct: 174 IKDPVIAKAIERLHEQAFTNITIQNVASHFGLSSVQFTRRFQANVGISPSEYLTLLRLRK 233 Query: 342 ARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVN 387 AR+LL+ T +I++I+ CGY + YF +F K +P +R ++ Sbjct: 234 ARTLLLETDYTIDDIASRCGYSNGFYFSRIFSKKMKMSPSNFRKIH 279 >UniRef50_C1TM41 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TM41_9BACT Length = 522 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 34/110 (30%), Positives = 67/110 (60%), Gaps = 5/110 (4%) Query: 281 SLTDPAVI---QAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAE 337 S +DP VI QA+HYI + + +++V DAV +S S L + F+ +G+ + + Sbjct: 415 SASDPTVIMVQQALHYIEANY-DDVTLERVADAVHVSPSYLSRTFRRVLGDRFVDKVKSV 473 Query: 338 KLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVN 387 ++++A++LL S +S+ +++ GY ++ YF ++FK++ +P +YR N Sbjct: 474 RMDRAKALL-SDGVSVRDVAISVGYGNIAYFSTIFKQSTGCSPSDYRKKN 522 >UniRef50_A8S4U5 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S4U5_9CLOT Length = 407 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 53/105 (50%) Query: 284 DPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKAR 343 P V +A+ YIR H + + + + +S S L + F E G+++ I ++EKA Sbjct: 300 SPLVRKAVTYIRIHLADQLTLAGIAKGIRVSPSYLSRLFNRETGDSVSNFITKARVEKAA 359 Query: 344 SLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNS 388 LL + +SI I+ G+ L YF FKK TP EYR +S Sbjct: 360 GLLSFSGMSIQNIAFYVGFGDLNYFSRCFKKYKKMTPTEYRASSS 404 >UniRef50_C5BA25 DNA-binding transcriptional dual regulator n=2 Tax=Edwardsiella RepID=C5BA25_EDWI9 Length = 119 Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 36/92 (39%), Positives = 47/92 (51%) Query: 293 YIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLS 352 +I NH GIK V+ G SRS + F+ +G T+ I E+L+ + L T L Sbjct: 17 WIANHVHLGIKSADVIAISGYSRSYFLREFELAMGTTLANYIRLERLKLSLQQLEETELR 76 Query: 353 INEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 I EIS GYPS F +FK Y +P EYR Sbjct: 77 IKEISHALGYPSQSTFCQIFKNQYRVSPSEYR 108 >UniRef50_Q639B6 Methylphosphotriester-DNA alkyltransferase n=26 Tax=Bacillus cereus group RepID=Q639B6_BACCZ Length = 198 Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 43/159 (27%), Positives = 76/159 (47%), Gaps = 21/159 (13%) Query: 230 VALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQ 289 V+ S AQ A++ GY+ K L+ +I P V+E Sbjct: 52 VSFFSNAQEAQRAGYRPCKRCRSDLN------IKIYDPFECVLE---------------D 90 Query: 290 AMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLIST 349 M I+N+ + + ++++ VG+SR +L + FKE G T + +++KA+ LL++T Sbjct: 91 TMRLIKNNYVQNMSLNEIASRVGVSRFHLNRIFKERTGYTPRIYLERIRVKKAKELLLTT 150 Query: 350 TLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNS 388 + EI GY S+ FY+ FK+ +P ++R +S Sbjct: 151 VFNSTEIGYQTGYQSVSSFYNAFKRNTGFSPSQFRAFHS 189 >UniRef50_B8CY86 Regulatory protein GntR HTH n=1 Tax=Halothermothrix orenii H 168 RepID=B8CY86_HALOH Length = 368 Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 65/105 (61%), Gaps = 3/105 (2%) Query: 174 LADWLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALS 233 L ++++ P T II V + A ++++C +I +PE + +I DN ++ R+L V L+ Sbjct: 257 LYNFIKENKP-TAIIGVHNDVALDVVKMCRANNISIPEDISIICFDNTDIVRHLE-VPLT 314 Query: 234 SVAQGARQMGYQAAKLLHRLLD-KEEMPLQRILVPPVRVIERRST 277 ++ Q AR++GY AAKL+ + ++ +EE + + PV++IER S Sbjct: 315 TLVQDARKIGYDAAKLIVKKINSQEETGIMNQIYHPVKLIERNSC 359 >UniRef50_B8I8I4 Transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=B8I8I4_CLOCE Length = 300 Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 39/127 (30%), Positives = 68/127 (53%), Gaps = 4/127 (3%) Query: 261 LQRILVPPVRVIERRSTDYRSLTDPAVI--QAMHYIRNHACKGIKVDQVLDAVGISRSNL 318 L +LV P I+R +T RS + I + YI N+ K + + + + G+S++ Sbjct: 165 LNLLLVSPENTIKRINT--RSFENNYEIIKSSQKYIDNNLHKDLTLLDLAERCGVSKNFY 222 Query: 319 EKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDT 378 K FK +G + I ++ A+ LL +T + I++IS MCG ++ YF+ +FKK + Sbjct: 223 CKIFKSIIGLSPFDYIIQSRMNTAKRLLTTTNMKISDISIMCGINNITYFHKLFKKHVNM 282 Query: 379 TPKEYRD 385 TP +R+ Sbjct: 283 TPANFRE 289 >UniRef50_A7VBS4 Putative uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VBS4_9CLOT Length = 247 Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 34/98 (34%), Positives = 53/98 (54%) Query: 287 VIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLL 346 V+Q + YI +H + I+V V DAV + L + FK+++ ++ I EK AR +L Sbjct: 136 VMQVVSYINSHITEPIRVSDVADAVKLHPDYLTRLFKKDMNCSLSQYIIKEKCRAARYML 195 Query: 347 ISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 +++ S EIS + S +F + FKK Y TP YR Sbjct: 196 LNSQASCTEISSFLYFASCSHFVNCFKKEYGLTPNAYR 233 >UniRef50_B2VHH7 Putative transcriptional regulator n=1 Tax=Erwinia tasmaniensis RepID=B2VHH7_ERWT9 Length = 110 Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 33/92 (35%), Positives = 53/92 (57%) Query: 293 YIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLS 352 +I H +G+ ++ V G S+ +L++ FK + G T+ I +LE+A L+++T S Sbjct: 12 WIECHIEEGLNIEAVAAKSGYSKWHLQRAFKAQKGITLATFIRGRRLEQAAQSLVNSTKS 71 Query: 353 INEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 I IS G+ S Q F VFKK + TP++YR Sbjct: 72 IMAISTELGFSSQQCFQRVFKKHFHITPRDYR 103 >UniRef50_A7VQN5 Putative uncharacterized protein n=2 Tax=Clostridium leptum DSM 753 RepID=A7VQN5_9CLOT Length = 514 Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 29/94 (30%), Positives = 53/94 (56%) Query: 294 IRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSI 353 I +GI +D++ + + ++ L +F +EVG T + +++KA+ LLI T L + Sbjct: 420 IHEFYARGITLDEIAEKLNVTPEYLGSQFHKEVGVTFSTYMKEYRIQKAKKLLIGTNLKL 479 Query: 354 NEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVN 387 E+++ GY + +YF +FK+ P EYR +N Sbjct: 480 YEVAEQVGYATPKYFSKIFKEVTGQFPAEYRKLN 513 >UniRef50_C0ADX5 AraC-type DNA-binding domain-containing protein-like protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0ADX5_9BACT Length = 271 Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 32/102 (31%), Positives = 53/102 (51%) Query: 285 PAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARS 344 P V +AM I H + I+V+ + + +S+++L + FK VG T+ I ++E A Sbjct: 169 PIVARAMDEIDMHLAESIEVEALAGELNVSQTHLNRLFKSAVGTTVGDYIRGRRMESALH 228 Query: 345 LLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDV 386 LL TT+SI +I+ G P Q+F ++ + P R V Sbjct: 229 LLRHTTMSIKQIAWQVGIPDAQHFNKAVRRQFGQAPSALRQV 270 >UniRef50_A6UIP9 Helix-turn-helix-domain containing protein AraC type n=4 Tax=Rhizobiaceae RepID=A6UIP9_SINMW Length = 293 Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 35/117 (29%), Positives = 60/117 (51%), Gaps = 5/117 (4%) Query: 268 PVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVG 327 PV+VI + SL V + YI H I + ++ G++ + +RFK G Sbjct: 175 PVKVIR-----HGSLGGAVVKRVRDYIDAHLDGDISLGELAHVAGVAADSFARRFKATTG 229 Query: 328 ETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 +A + E++ +A SLL T ++++EI+ CG+ S +F + FK+ TP+ YR Sbjct: 230 LAPYAYVIEERVRRAESLLHETDIALSEIALNCGFSSQSHFTATFKRLRGITPRAYR 286 >UniRef50_UPI000196B709 hypothetical protein CATMIT_00139 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196B709 Length = 269 Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 1/92 (1%) Query: 294 IRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSI 353 I N++ K I +DQ+ D SR L FK + TIH + +L+KA LL + ++ Sbjct: 176 IANYS-KPITIDQLCDFFFCSRGTLLTHFKSKYNTTIHKFLLDYRLKKAAELLTNKKQTV 234 Query: 354 NEISQMCGYPSLQYFYSVFKKAYDTTPKEYRD 385 EI+ CG+ YF VFKK Y +P E+++ Sbjct: 235 KEIAYQCGFEDPNYFCKVFKKEYQCSPLEFKN 266 >UniRef50_Q03HU6 AraC-type DNA-binding transcriptional regulator n=1 Tax=Pediococcus pentosaceus ATCC 25745 RepID=Q03HU6_PEDPA Length = 242 Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 32/116 (27%), Positives = 65/116 (56%), Gaps = 1/116 (0%) Query: 275 RSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMI 334 R+ D+ ++ + A +YI H + +++DQ+ + + + RF+ E+G ++ I Sbjct: 128 RNVDFSKVSKQVALTA-YYINMHRYERLRIDQIFATLNLDKKYTLTRFRAELGFSVTQYI 186 Query: 335 HAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSEV 390 K+ +A++LLI+T++SI +I+Q+ + F F K Y +P++YR +N V Sbjct: 187 RHVKMTEAKNLLINTSMSIGKIAQILKFYDTANFSREFFKEYAVSPRKYRQLNRLV 242 >UniRef50_Q5L870 Sensor protein n=4 Tax=Bacteroides RepID=Q5L870_BACFN Length = 1307 Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 33/82 (40%), Positives = 52/82 (63%) Query: 304 VDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYP 363 V Q+ DA+ +SRS+L + K G ++ I+ ++E+A SLL++T L+INEIS G+ Sbjct: 1221 VQQLADAMIVSRSSLYSKIKIITGMGVNDYINRLRIEQAMSLLVNTNLNINEISCEVGFT 1280 Query: 364 SLQYFYSVFKKAYDTTPKEYRD 385 +YF S FK TPK++R+ Sbjct: 1281 YPRYFSSTFKSMTGMTPKQFRN 1302 >UniRef50_A8FAK6 AraC family transcriptional regulator n=2 Tax=Bacillus pumilus RepID=A8FAK6_BACP2 Length = 352 Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 32/101 (31%), Positives = 58/101 (57%), Gaps = 1/101 (0%) Query: 284 DPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKAR 343 D +IQ + YI+ C+ I + ++ + +S S L K ++G++ + +LEKA Sbjct: 248 DIRMIQMLQYIQ-QCCEHITIQEMAEEFNLSPSYLSKYIARKLGKSFREIRQEIRLEKAC 306 Query: 344 SLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 ++ S+ L IN+I+ GY ++++F +FKK Y TP +YR Sbjct: 307 EMITSSNLQINDIATAVGYQNVEHFIRLFKKKYHLTPHQYR 347 >UniRef50_A4WEG5 Transcriptional regulator, AraC family n=5 Tax=Enterobacteriaceae RepID=A4WEG5_ENT38 Length = 279 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 31/96 (32%), Positives = 51/96 (53%) Query: 289 QAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLIS 348 Q M ++ H + +D + +G SRS + ++F E GE IH ++ +L KA L+ Sbjct: 178 QVMFWLDEHYQQKFSLDALAGELGKSRSYVSRKFHAETGEKIHDYLNTLRLRKACECLLH 237 Query: 349 TTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 + S+ +I+ G+ + YF S FKK TP +YR Sbjct: 238 SNESVRDIATRVGFSDVTYFISAFKKGIGETPLQYR 273 >UniRef50_A6M1I8 Transcriptional regulator, AraC family n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6M1I8_CLOB8 Length = 279 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 37/99 (37%), Positives = 53/99 (53%) Query: 289 QAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLIS 348 +A YI N+ IKV + VGI R+ L K F EE + + + +L A +LL + Sbjct: 172 KARDYIYNNFGYDIKVSDIAKYVGIDRTYLYKIFMEEYKISPQKYLISSRLNTAVNLLET 231 Query: 349 TTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVN 387 T ++I EIS CG+ FY FKK ++ TP +YR N Sbjct: 232 TKMNITEISYSCGFKDTPTFYKHFKKQFNITPVQYRKSN 270 >UniRef50_UPI0001787E1A transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001787E1A Length = 769 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 44/138 (31%), Positives = 77/138 (55%), Gaps = 7/138 (5%) Query: 252 RLLDKEEMP-LQRILVPPVR-VIERRST---DYRSLTDPAVIQAMHYIRNHACKGIKVDQ 306 R+L+KE + ++ +L+ VR V E+R + D L V + + +++A + V + Sbjct: 625 RILEKETLDEIECVLLDVVREVFEQRRSGREDKNRLLADTVKEMID--KHYADPDLNVQK 682 Query: 307 VLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQ 366 + D + +S L + FK + G T+ I+A +L +A+ L L++ EI + G+ + Sbjct: 683 IADMLKMSSVYLGQVFKAQEGTTVVDQINATRLARAQQYLEQQQLTVAEIMEKVGFGNES 742 Query: 367 YFYSVFKKAYDTTPKEYR 384 YFY +FK+ Y TTPKEYR Sbjct: 743 YFYRLFKRRYGTTPKEYR 760 >UniRef50_A6BDG3 Putative uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BDG3_9FIRM Length = 201 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 34/99 (34%), Positives = 54/99 (54%) Query: 287 VIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLL 346 V Q + YI +H + I V D +G S S+ K FK+ + T + ++ +L A LL Sbjct: 102 VKQIVSYIESHYTEPITVQSTADYLGFSESHFMKFFKQHLHTTFTSYLNGYRLTIAARLL 161 Query: 347 ISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRD 385 ++ SI IS+ G+ +L YF +FKK Y +P+ YR+ Sbjct: 162 LTEDDSILSISERTGFNNLSYFNRLFKKEYQMSPRAYRN 200 >UniRef50_B0PG61 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PG61_9FIRM Length = 533 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 36/116 (31%), Positives = 56/116 (48%), Gaps = 5/116 (4%) Query: 273 ERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHA 332 ++R D R + A YI+ H + ++ V + VG S S FK+E G+ Sbjct: 423 QKRQADTRPIR-----TAKQYIQEHYADPLTLEWVSNIVGFSGSYFSSLFKKETGQNFLE 477 Query: 333 MIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNS 388 + ++ +A+ LL T LS+ E+ GY L+YF FKKA P E+R + S Sbjct: 478 YLSEVRMNRAKELLRETNLSVAEVCVRVGYSDLKYFTKSFKKATGLKPGEFRKLYS 533 >UniRef50_Q5WIZ4 Putative uncharacterized protein n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WIZ4_BACSK Length = 283 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 35/101 (34%), Positives = 56/101 (55%), Gaps = 1/101 (0%) Query: 285 PAVI-QAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKAR 343 PA I +++ YI H + + + + + S K+FK +G T + +++L KA+ Sbjct: 180 PAWIKESLAYIDAHLHEELDLKMLAAHACVHPSYFSKKFKASIGLTYIEFLKSKRLVKAK 239 Query: 344 SLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 LL +T LSI I++ CGY S+ +FY F+ A TTP YR Sbjct: 240 DLLKTTDLSIQAIAEACGYHSMPHFYRTFRAATGTTPAAYR 280 >UniRef50_B9Y8E0 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y8E0_9FIRM Length = 414 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 35/100 (35%), Positives = 56/100 (56%) Query: 285 PAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARS 344 P V+ AM +I + K I + V + + S+L F + G ++ I ++EKARS Sbjct: 301 PEVLLAMGFIHENYQKDISLKLVAEYTNTNVSHLSSEFNRQTGSSLPDFIAGLRIEKARS 360 Query: 345 LLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 L ++TL+I +IS+ G+ S +YF +FKK TP +YR Sbjct: 361 DLENSTLTIAQISREVGFGSERYFTEIFKKHCGKTPLQYR 400 >UniRef50_Q4L316 Similar to transcriptional regulator n=2 Tax=Staphylococcus RepID=Q4L316_STAHJ Length = 405 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 36/112 (32%), Positives = 61/112 (54%), Gaps = 1/112 (0%) Query: 280 RSLTDPAVIQA-MHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEK 338 +SL A I + +I+ + + + ++++ D VG++ S L + F +E G+++ I + Sbjct: 293 KSLKYSANINTVIQHIKINLDRPLCLNELADLVGLAPSYLSRLFNQETGQSVSQYIMQLR 352 Query: 339 LEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSEV 390 +EK R LLI T + ++EIS G+ YF FK Y +P EYR S V Sbjct: 353 VEKGRDLLIHTPMKVDEISNYIGFKQQSYFTKCFKAKYQLSPLEYRKQYSSV 404 >UniRef50_C7Q086 Transcriptional regulator, LacI family n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7Q086_CATAD Length = 354 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 64/210 (30%), Positives = 90/210 (42%), Gaps = 16/210 (7%) Query: 73 LADVDVPIVGVGGSYH-LAESYPPVHYIATDNYALVESAFLHLKEKGVNRFAFYGLPESS 131 LA+ DVP V G + A Y ++ D +A +A HL G R AF G PE S Sbjct: 147 LAERDVPFVSFGRPWEKTAFEY---SWLDVDGHAGTLAATRHLAAAGHRRVAFLGWPEGS 203 Query: 132 GKRWATEREYAFRQLVAEE---KYRGVVYQGLETAPENWQHAQNRLADWLQTLPPQTGII 188 + YA AEE RG+ +GL + + A A L P T + Sbjct: 204 ---EVGDDRYAGYLAAAEELGLPTRGLTVRGLNGIGDGTKLA----AALLDKAHPPTAFV 256 Query: 189 AVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAK 248 V+DA A ++ EH + V + VIG D+ L + + ALSSV Q + Q Sbjct: 257 CVSDAMAVGVMHAVEHRGLAVGRDVAVIGFDDSPLATVV-QPALSSVRQPLESIARQCVD 315 Query: 249 LLHRLLDKEEMPLQRILVPPVRVIERRSTD 278 L+ +D + +V P VI R S+D Sbjct: 316 LVLERIDDPRSAVTTSVVEPT-VIARGSSD 344 >UniRef50_UPI0001789626 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789626 Length = 305 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 39/122 (31%), Positives = 63/122 (51%) Query: 263 RILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRF 322 ++LV R+ E R +D + +++ Y+ + + I+V V V + L + F Sbjct: 165 QLLVCIARLYEERERSDMQQSDFYIKRSVDYLHQNYDRQIQVKDVAAEVNLHPGYLHRVF 224 Query: 323 KEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKE 382 + G TI + ++EKA+ LL T + I+EIS G S QYF+ +FKK +TP E Sbjct: 225 RRGTGRTITEYLTTIRMEKAKMLLEQTDIPIHEISDYVGVGSRQYFHMLFKKYTGSTPVE 284 Query: 383 YR 384 YR Sbjct: 285 YR 286 >UniRef50_C5RJF8 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RJF8_CLOCL Length = 305 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 30/108 (27%), Positives = 62/108 (57%) Query: 280 RSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKL 339 + +D + + ++YI + K IK++ + + + + L K FK E+ ++ + ++ Sbjct: 193 NNCSDNIMKRIVNYIDRNYYKDIKLEMLAEIFNYNSAYLGKMFKNHTNESFNSYLDKIRI 252 Query: 340 EKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVN 387 E A+ LL + +L + ++S+ GY ++ YFYS FK+ +PKEY+ +N Sbjct: 253 ENAKKLLTNDSLKVYQVSEKVGYKNIDYFYSKFKRYVGMSPKEYKKLN 300 >UniRef50_UPI0001C363C9 transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C363C9 Length = 319 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 44/167 (26%), Positives = 79/167 (47%), Gaps = 3/167 (1%) Query: 217 GIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRS 276 +++ E+T + R+ G + G L +LL+ + +L R ++R Sbjct: 153 AVESIEITPGICRILAELEQSGRYEDGIGCLYLEGKLLELLAASFKELLT--CRKAQKRL 210 Query: 277 TDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHA 336 AV +A + H +Q+ AVG+S S L + F E G TIH+ + Sbjct: 211 CGITRTDQEAVREAKRILDRHLTDAPDCEQLARAVGVSVSRLARLFSEVTGNTIHSYLIE 270 Query: 337 EKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEY 383 +LE A +LL++ ++++ + + GY ++ +F + FKK Y PKEY Sbjct: 271 RRLEHA-ALLLTEQKNVSQAAALSGYSNMSHFSASFKKKYGVLPKEY 316 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P0ACI5 Xylose operon regulatory protein n=151 Tax=Gamma... 524 e-147 UniRef50_B3H2Y3 Xylose operon regulatory protein n=7 Tax=Gammapr... 428 e-118 UniRef50_P45043 Xylose operon regulatory protein n=26 Tax=Gammap... 421 e-116 UniRef50_B2JFF0 Transcriptional regulator, AraC family n=39 Tax=... 400 e-110 UniRef50_A4A1D2 Xylose operon regulatory protein n=3 Tax=Plancto... 397 e-109 UniRef50_A3ZY76 Xylose operon regulatory protein n=1 Tax=Blastop... 375 e-102 UniRef50_A6C655 Xylose operon regulatory protein n=1 Tax=Plancto... 373 e-102 UniRef50_B4CYR5 Transcriptional regulator, AraC family n=2 Tax=V... 372 e-101 UniRef50_Q7UYL2 Xylose operon regulatory protein n=4 Tax=Plancto... 368 e-100 UniRef50_A6CF05 Xylose operon regulatory protein n=1 Tax=Plancto... 364 3e-99 UniRef50_A6C3C2 Xylose operon regulatory protein n=2 Tax=Plancto... 362 1e-98 UniRef50_A6CCU7 Xylose operon regulatory protein n=1 Tax=Plancto... 361 3e-98 UniRef50_A6C615 Xylose operon regulatory protein n=1 Tax=Plancto... 358 1e-97 UniRef50_C5BYV3 Transcriptional regulator, AraC family n=1 Tax=B... 358 2e-97 UniRef50_B5JFL8 Transcriptional regulator, AraC family protein n... 355 1e-96 UniRef50_C1ZFQ8 Transcriptional regulator n=1 Tax=Planctomyces l... 355 2e-96 UniRef50_A3ZQ62 Xylose operon regulatory protein n=1 Tax=Blastop... 352 1e-95 UniRef50_Q7UHK5 Xylose operon regulatory protein n=2 Tax=Plancto... 347 4e-94 UniRef50_D2QUQ8 Transcriptional regulator, AraC family n=1 Tax=S... 347 5e-94 UniRef50_Q7UHJ2 Xylose operon regulatory protein n=1 Tax=Rhodopi... 346 6e-94 UniRef50_Q64VG9 Transcriptional regulator n=8 Tax=Bacteroidales ... 344 3e-93 UniRef50_C0A9R7 Xylose operon regulatory protein n=1 Tax=Opituta... 344 3e-93 UniRef50_B5JIB2 Transcriptional regulator, AraC family protein n... 343 6e-93 UniRef50_A6CDQ7 Xylose operon regulatory protein n=1 Tax=Plancto... 342 1e-92 UniRef50_D2R7D2 Transcriptional regulator, AraC family n=1 Tax=P... 341 3e-92 UniRef50_Q7UXA9 Xylose operon regulatory protein n=1 Tax=Rhodopi... 340 6e-92 UniRef50_D1W5K7 Transcriptional regulator, AraC family n=1 Tax=P... 334 2e-90 UniRef50_C6W1V7 Transcriptional regulator, AraC family n=1 Tax=D... 333 5e-90 UniRef50_C1ZL78 Transcriptional regulator n=1 Tax=Planctomyces l... 333 6e-90 UniRef50_B1ZWW6 Transcriptional regulator, AraC family n=4 Tax=O... 333 8e-90 UniRef50_A6DIY5 Xylose operon regulatory protein n=1 Tax=Lentisp... 328 2e-88 UniRef50_C3QXL3 Transcriptional regulator n=7 Tax=Bacteroides Re... 327 4e-88 UniRef50_UPI000174642C xylose operon regulatory protein n=3 Tax=... 324 3e-87 UniRef50_A6C7I7 Xylose operon regulatory protein n=1 Tax=Plancto... 321 2e-86 UniRef50_A3ZWJ4 Xylose operon regulatory protein n=1 Tax=Blastop... 321 4e-86 UniRef50_C0A1Z9 Xylose operon regulatory protein n=2 Tax=Opituta... 317 4e-85 UniRef50_A3ZSV8 Xylose operon regulatory protein n=1 Tax=Blastop... 317 5e-85 UniRef50_B1ZT55 Transcriptional regulator, AraC family n=1 Tax=O... 313 1e-83 UniRef50_A3ZVD0 Xylose operon regulatory protein n=1 Tax=Blastop... 309 8e-83 UniRef50_C0A646 Xylose operon regulatory protein n=1 Tax=Opituta... 308 2e-82 UniRef50_B4D2S2 Transcriptional regulator, AraC family n=1 Tax=C... 307 6e-82 UniRef50_A3ZWC2 Xylose operon regulatory protein n=1 Tax=Blastop... 299 1e-79 UniRef50_UPI00019688DE hypothetical protein BACCELL_02763 n=1 Ta... 295 2e-78 UniRef50_B4CUN0 Transcriptional regulator, AraC family n=1 Tax=C... 292 2e-77 UniRef50_A4BCC5 PurR protein n=1 Tax=Reinekea blandensis MED297 ... 288 2e-76 UniRef50_A6DP72 Xylose operon regulatory protein n=1 Tax=Lentisp... 287 4e-76 UniRef50_D2R9H5 Transcriptional regulator, AraC family n=1 Tax=P... 279 9e-74 UniRef50_UPI0001745892 xylose operon regulatory protein n=1 Tax=... 277 6e-73 UniRef50_D1N410 Transcriptional regulator, AraC family n=1 Tax=V... 272 1e-71 UniRef50_B5JEL5 Transcriptional regulator, AraC family protein n... 272 1e-71 UniRef50_B5JIL8 Transcriptional regulator, AraC family protein n... 269 1e-70 UniRef50_UPI000174567C xylose operon regulatory protein n=1 Tax=... 264 4e-69 UniRef50_A6DPD5 Xylose operon regulatory protein n=1 Tax=Lentisp... 260 8e-68 UniRef50_Q6LUY4 Putative uncharacterized protein n=1 Tax=Photoba... 254 3e-66 UniRef50_C0AAZ9 Transcriptional regulator, AraC family n=1 Tax=O... 250 6e-65 UniRef50_C0A5R8 Transcriptional regulators-like protein n=1 Tax=... 243 1e-62 UniRef50_D1N888 Transcriptional regulator, AraC family n=1 Tax=V... 242 2e-62 UniRef50_C0ACC5 Transcriptional regulators-like protein n=1 Tax=... 235 3e-60 UniRef50_D1N1K4 Transcriptional regulator, AraC family n=1 Tax=V... 220 8e-56 UniRef50_C0A5A7 AraC-type DNA-binding domain-containing protein-... 209 2e-52 UniRef50_C0AC48 Transcriptional regulators-like protein n=1 Tax=... 207 6e-52 UniRef50_Q21A44 Two component transcriptional regulator, AraC fa... 181 4e-44 UniRef50_A4XHB8 Two component transcriptional regulator, AraC fa... 163 9e-39 UniRef50_A0Q2M6 Transcriptional regulatory protein n=6 Tax=Clost... 163 1e-38 UniRef50_UPI0001B9ECE6 two component transcriptional regulator, ... 162 2e-38 UniRef50_C6CRZ9 Two component transcriptional regulator, AraC fa... 161 4e-38 UniRef50_C6QRS7 Two component transcriptional regulator, AraC fa... 160 8e-38 UniRef50_UPI00016C020E hypothetical protein Epulo_10707 n=1 Tax=... 157 6e-37 UniRef50_A4XJL7 Transcriptional regulator, AraC family n=2 Tax=C... 157 6e-37 UniRef50_C6LLK3 Putative two-component response regulator n=1 Ta... 157 7e-37 UniRef50_C6JEP4 Two component transcriptional regulator n=3 Tax=... 157 7e-37 UniRef50_C7G788 Transcriptional regulator, AraC family n=2 Tax=B... 157 7e-37 UniRef50_A6NS86 Putative uncharacterized protein n=1 Tax=Bactero... 157 9e-37 UniRef50_C1P7P5 Transcriptional regulator, AraC family n=1 Tax=B... 157 9e-37 UniRef50_C4Z204 AraC family transcriptional regulator, L-rhamnos... 156 1e-36 UniRef50_C4Z3B2 Two-component system, response regulator YesN n=... 156 1e-36 UniRef50_B0K234 Response regulator receiver protein n=8 Tax=Ther... 154 4e-36 UniRef50_C5EHL9 Predicted protein n=1 Tax=Clostridiales bacteriu... 154 5e-36 UniRef50_C6D127 Two component transcriptional regulator, AraC fa... 154 5e-36 UniRef50_C3WEF1 Putative uncharacterized protein n=1 Tax=Fusobac... 154 6e-36 UniRef50_UPI0001788F54 two component transcriptional regulator, ... 154 6e-36 UniRef50_Q2RGN4 Two component transcriptional regulator, AraC fa... 153 9e-36 UniRef50_B9XAQ1 Transcriptional regulator, AraC family n=2 Tax=V... 153 9e-36 UniRef50_UPI0001788A43 two component transcriptional regulator, ... 153 1e-35 UniRef50_C6LLM9 Two-component response regulator n=1 Tax=Bryante... 153 1e-35 UniRef50_C0CVY3 Putative uncharacterized protein n=1 Tax=Clostri... 152 2e-35 UniRef50_C5ETL2 Two component transcriptional regulator n=1 Tax=... 152 2e-35 UniRef50_C6D5X4 Two component transcriptional regulator, AraC fa... 152 2e-35 UniRef50_C0CGQ4 Putative uncharacterized protein n=1 Tax=Blautia... 152 3e-35 UniRef50_C6D708 Transcriptional regulator, AraC family n=1 Tax=P... 152 3e-35 UniRef50_B0PG61 Putative uncharacterized protein n=1 Tax=Anaerot... 151 4e-35 UniRef50_B1QUU6 Two-component response regulator n=3 Tax=Clostri... 151 5e-35 UniRef50_C6CVC0 Two component transcriptional regulator, AraC fa... 151 5e-35 UniRef50_Q5QL43 Two-component response regulator n=2 Tax=Geobaci... 151 6e-35 UniRef50_B0PFD6 Putative uncharacterized protein n=1 Tax=Anaerot... 150 7e-35 UniRef50_UPI0001C36936 two component transcriptional regulator, ... 150 7e-35 UniRef50_B3EYL7 Two-component response regulator n=5 Tax=Firmicu... 150 7e-35 UniRef50_A5Z5R3 Putative uncharacterized protein n=1 Tax=Eubacte... 150 7e-35 UniRef50_C0ET05 Putative uncharacterized protein n=2 Tax=Firmicu... 150 9e-35 UniRef50_C7IHS7 Transcriptional regulator, AraC family n=1 Tax=C... 150 9e-35 UniRef50_C9BAM1 Helix-turn-helix domain-containing protein n=12 ... 150 1e-34 UniRef50_A4ITD0 Sugar ABC transporter (Permease) n=3 Tax=Bacilla... 150 1e-34 UniRef50_C6CT66 Two component transcriptional regulator, AraC fa... 150 1e-34 UniRef50_B8I4H6 Transcriptional regulator, AraC family n=1 Tax=C... 149 1e-34 UniRef50_B0NX83 Putative uncharacterized protein n=1 Tax=Clostri... 149 1e-34 UniRef50_B0NF43 Putative uncharacterized protein n=1 Tax=Clostri... 149 1e-34 UniRef50_UPI0001C358FB two component transcriptional regulator, ... 149 1e-34 UniRef50_A4FN08 LacI-type transcriptional regulator n=2 Tax=Acti... 149 1e-34 UniRef50_B5YFJ6 Transcriptional regulator, putative n=2 Tax=Dict... 149 1e-34 UniRef50_C4ZBY6 Transcriptional regulator, AraC family n=7 Tax=C... 149 2e-34 UniRef50_C5EK80 Putative uncharacterized protein n=2 Tax=Clostri... 149 2e-34 UniRef50_A6P0J9 Putative uncharacterized protein n=1 Tax=Bactero... 149 2e-34 UniRef50_C6D3S3 Two component transcriptional regulator, AraC fa... 149 2e-34 UniRef50_B2GEN0 Transcriptional regulator n=1 Tax=Lactobacillus ... 148 2e-34 UniRef50_B7GLF3 Transcriptional regulator, LacI family (HTH and ... 148 2e-34 UniRef50_UPI0001788C4E two component transcriptional regulator, ... 148 3e-34 UniRef50_C0ZDD0 Probable transcriptional regulator n=1 Tax=Brevi... 148 3e-34 UniRef50_B1HSI7 Transcriptional regulator, AraC family n=2 Tax=B... 148 3e-34 UniRef50_A9U777 Predicted protein n=1 Tax=Physcomitrella patens ... 148 3e-34 UniRef50_C9L4P7 DNA-binding response regulator, AraC family n=1 ... 148 4e-34 UniRef50_C5RGS5 Transcriptional regulator, AraC family n=1 Tax=C... 148 5e-34 UniRef50_C4G5N9 Putative uncharacterized protein n=1 Tax=Abiotro... 148 5e-34 UniRef50_D2LQR6 Transcriptional regulator, AraC family n=1 Tax=B... 148 5e-34 UniRef50_UPI0001789FEA two component transcriptional regulator, ... 147 5e-34 UniRef50_A5ZVU5 Putative uncharacterized protein n=1 Tax=Ruminoc... 147 5e-34 UniRef50_C6JD25 Response regulator receiver protein n=1 Tax=Rumi... 147 6e-34 UniRef50_B1QZ71 Two-component response regulator n=2 Tax=Clostri... 147 6e-34 UniRef50_C6J2H9 Response regulator n=1 Tax=Paenibacillus sp. ora... 147 6e-34 UniRef50_B1B7W8 Transcriptional regulator, AraC family protein n... 147 6e-34 UniRef50_A9U7E9 Predicted protein n=1 Tax=Physcomitrella patens ... 147 7e-34 UniRef50_C6LII8 Two-component response regulator n=1 Tax=Bryante... 147 7e-34 UniRef50_A3CL13 AraC-type DNA-binding domain-containing protein,... 147 7e-34 UniRef50_B8I9A3 Transcriptional regulator, AraC family n=1 Tax=C... 147 7e-34 UniRef50_C8P1S0 AraC family DNA-binding response regulator n=1 T... 147 8e-34 UniRef50_B0C7G2 Transcriptional regulator, AraC family n=1 Tax=A... 147 8e-34 UniRef50_C6D078 Two component transcriptional regulator, AraC fa... 147 8e-34 UniRef50_UPI0001789626 transcriptional regulator, AraC family n=... 146 1e-33 UniRef50_B1R4J4 Response regulator receiver protein n=3 Tax=Clos... 146 1e-33 UniRef50_A7VRD3 Putative uncharacterized protein n=1 Tax=Clostri... 146 1e-33 UniRef50_UPI0001C362BB response regulator receiver protein n=1 T... 146 1e-33 UniRef50_A8RIR6 Putative uncharacterized protein n=1 Tax=Clostri... 146 1e-33 UniRef50_C0D691 Putative uncharacterized protein n=1 Tax=Clostri... 146 1e-33 UniRef50_A6CLV0 AraC-type DNA-binding domain-containing protein ... 146 2e-33 UniRef50_B8I0K9 Two component transcriptional regulator, AraC fa... 146 2e-33 UniRef50_Q5WK40 Two-component response regulator n=1 Tax=Bacillu... 146 2e-33 UniRef50_C6D3W5 Two component transcriptional regulator, AraC fa... 146 2e-33 UniRef50_Q2BFH4 Putative uncharacterized protein n=1 Tax=Bacillu... 145 2e-33 UniRef50_C0FZV1 Putative uncharacterized protein n=1 Tax=Rosebur... 145 2e-33 UniRef50_Q5WL10 AraC/XylS family transcriptional regulator n=1 T... 145 2e-33 UniRef50_B0NGA4 Putative uncharacterized protein n=1 Tax=Clostri... 145 2e-33 UniRef50_A8FI25 Response regulator n=2 Tax=Bacillus pumilus RepI... 145 2e-33 UniRef50_D1PRZ9 DNA-bindng response regulator, AraC family n=2 T... 145 2e-33 UniRef50_D2LZT6 Two component transcriptional regulator, AraC fa... 145 3e-33 UniRef50_A8SRM1 Putative uncharacterized protein n=1 Tax=Coproco... 145 3e-33 UniRef50_C1I6U7 Helix-turn-helix domain-containing protein n=1 T... 145 3e-33 UniRef50_UPI0001C359BB two component transcriptional regulator, ... 145 3e-33 UniRef50_C2Z9K1 Transcriptional regulator, AraC n=2 Tax=Bacillus... 145 3e-33 UniRef50_UPI0001851370 two component AraC family transcriptional... 145 3e-33 UniRef50_Q9K690 Two-component response regulator n=1 Tax=Bacillu... 145 3e-33 UniRef50_Q1VVA7 AraC-type DNA-binding domain-containing protein ... 145 4e-33 UniRef50_A9U7M3 Predicted protein n=1 Tax=Physcomitrella patens ... 145 4e-33 UniRef50_B0NHY9 Putative uncharacterized protein n=2 Tax=Clostri... 145 4e-33 UniRef50_UPI0001C3678C two component transcriptional regulator, ... 144 4e-33 UniRef50_C6IY53 Two component transcriptional regulator n=1 Tax=... 144 4e-33 UniRef50_C4FUL3 Putative uncharacterized protein n=2 Tax=Catonel... 144 4e-33 UniRef50_B7DU32 Transcriptional regulator, AraC family n=1 Tax=A... 144 5e-33 UniRef50_UPI0001789C33 transcriptional regulator, AraC family n=... 144 5e-33 UniRef50_B1ZXD9 Transcriptional regulator, AraC family n=2 Tax=O... 144 5e-33 UniRef50_C6CTP9 Two component transcriptional regulator, AraC fa... 144 5e-33 UniRef50_B8CYB7 Helix-turn-helix-domain containing protein AraC ... 144 5e-33 UniRef50_C6J0N4 Response regulator n=1 Tax=Paenibacillus sp. ora... 144 5e-33 UniRef50_C5RL17 Transcriptional regulator, AraC family n=2 Tax=C... 144 5e-33 UniRef50_UPI000178AA55 transcriptional regulator, AraC family n=... 144 5e-33 UniRef50_C6CVD2 Two component transcriptional regulator, AraC fa... 144 6e-33 UniRef50_A8SS64 Putative uncharacterized protein n=1 Tax=Coproco... 144 6e-33 UniRef50_A7B8B1 Putative uncharacterized protein n=1 Tax=Ruminoc... 144 6e-33 UniRef50_C6LAW9 Putative transcriptional regulator n=1 Tax=Bryan... 144 6e-33 UniRef50_C5RJF8 Transcriptional regulator, AraC family n=1 Tax=C... 144 6e-33 UniRef50_A8RR78 Putative uncharacterized protein n=1 Tax=Clostri... 143 7e-33 UniRef50_A8RPA3 Putative uncharacterized protein n=3 Tax=Clostri... 143 8e-33 UniRef50_Q8ES65 Hypothetical conserved protein n=1 Tax=Oceanobac... 143 8e-33 UniRef50_C6D659 Two component transcriptional regulator, AraC fa... 143 8e-33 Sequences not found previously or not previously below threshold: UniRef50_B0ABU8 Putative uncharacterized protein n=1 Tax=Clostri... 167 8e-40 UniRef50_C9RVZ3 Two component transcriptional regulator, AraC fa... 160 6e-38 UniRef50_C5D8H7 Two component transcriptional regulator, AraC fa... 159 1e-37 UniRef50_B9MLQ2 Two component transcriptional regulator, AraC fa... 158 4e-37 UniRef50_A4XFU2 Two component transcriptional regulator, AraC fa... 157 7e-37 UniRef50_B8I425 Two component transcriptional regulator, AraC fa... 156 1e-36 UniRef50_C0BFD5 Putative uncharacterized protein n=2 Tax=Clostri... 155 3e-36 UniRef50_C6IWJ9 Transcriptional regulator n=1 Tax=Paenibacillus ... 154 4e-36 UniRef50_Q2BDI9 Two-component response regulator n=2 Tax=Firmicu... 152 2e-35 UniRef50_D1PMJ1 Transcriptional regulator, AraC family n=2 Tax=R... 152 3e-35 UniRef50_B0K3C5 Response regulator receiver protein n=4 Tax=Ther... 151 3e-35 UniRef50_A4XMF1 Two component transcriptional regulator, AraC fa... 151 4e-35 UniRef50_A4XMI8 Two component transcriptional regulator, AraC fa... 151 5e-35 UniRef50_A8RPD4 Putative uncharacterized protein n=1 Tax=Clostri... 149 1e-34 UniRef50_A6TRZ8 Response regulator receiver protein n=1 Tax=Alka... 149 1e-34 UniRef50_C7GGB1 Putative two-component response regulator n=1 Ta... 149 2e-34 UniRef50_A9KQP4 Two component transcriptional regulator, AraC fa... 149 2e-34 UniRef50_B5CXD1 Putative uncharacterized protein n=1 Tax=Bactero... 149 2e-34 UniRef50_A9WH32 Sensor protein n=2 Tax=Chloroflexus RepID=A9WH32... 148 2e-34 UniRef50_A5Z5Z2 Putative uncharacterized protein n=1 Tax=Eubacte... 148 3e-34 UniRef50_C9RT55 Two component transcriptional regulator, AraC fa... 148 3e-34 UniRef50_A8ML53 Transcriptional regulator, AraC family n=1 Tax=A... 148 3e-34 UniRef50_A4XMG0 Two component transcriptional regulator, AraC fa... 148 4e-34 UniRef50_C3QA40 Putative uncharacterized protein n=3 Tax=Bactero... 148 4e-34 UniRef50_B0A7Q6 Putative uncharacterized protein n=1 Tax=Clostri... 148 5e-34 UniRef50_C6JBV9 Two component transcriptional regulator n=1 Tax=... 147 6e-34 UniRef50_C4ZBY2 Two-component response regulator n=4 Tax=Clostri... 147 7e-34 UniRef50_UPI0001C36195 two component transcriptional regulator, ... 147 7e-34 UniRef50_Q0SVP8 Transcriptional regulator, AraC family n=3 Tax=C... 147 7e-34 UniRef50_A9KJM4 Two component transcriptional regulator, AraC fa... 147 7e-34 UniRef50_B0K339 Response regulator receiver protein n=9 Tax=Ther... 147 8e-34 UniRef50_B8I0Y2 Two component transcriptional regulator, AraC fa... 147 9e-34 UniRef50_A8RMQ2 Putative uncharacterized protein n=1 Tax=Clostri... 147 9e-34 UniRef50_C6LGW7 DNA-binding response regulator n=1 Tax=Bryantell... 147 1e-33 UniRef50_A8SBA6 Putative uncharacterized protein n=1 Tax=Faecali... 147 1e-33 UniRef50_B8HZZ5 Two component transcriptional regulator, AraC fa... 146 1e-33 UniRef50_A6M2F4 Response regulator receiver protein n=1 Tax=Clos... 146 1e-33 UniRef50_UPI00017895AE two component transcriptional regulator, ... 146 1e-33 UniRef50_A4XMH2 Two component transcriptional regulator, AraC fa... 146 1e-33 UniRef50_C3RN82 Transcriptional regulator n=2 Tax=Bacteria RepID... 146 1e-33 UniRef50_C7IE87 Transcriptional regulator, AraC family n=1 Tax=C... 146 2e-33 UniRef50_C6J7M7 Response regulator n=2 Tax=Bacillales RepID=C6J7... 146 2e-33 UniRef50_UPI0001789620 two component transcriptional regulator, ... 146 2e-33 UniRef50_A7GT81 Helix-turn-helix-domain containing protein AraC ... 145 2e-33 UniRef50_C4ZBG0 Transcriptional regulator, AraC family n=5 Tax=C... 145 2e-33 UniRef50_A6M1S5 Transcriptional regulator, AraC family n=1 Tax=C... 145 3e-33 UniRef50_Q9K9C1 Two-component response regulator n=1 Tax=Bacillu... 145 3e-33 UniRef50_C6D6F5 Transcriptional regulator, AraC family n=1 Tax=P... 145 3e-33 UniRef50_B7GJK9 DNA-binding response regulator (Contains REC and... 145 3e-33 UniRef50_C6JCU5 Two component transcriptional regulator n=2 Tax=... 145 3e-33 UniRef50_A3DHI5 Transcriptional regulator, AraC family n=5 Tax=C... 145 3e-33 UniRef50_A8RKC7 Putative uncharacterized protein n=1 Tax=Clostri... 145 4e-33 UniRef50_A5ZM23 Putative uncharacterized protein n=1 Tax=Ruminoc... 144 4e-33 UniRef50_C5EPF6 Two component transcriptional regulator n=4 Tax=... 144 4e-33 UniRef50_C0ERJ9 Putative uncharacterized protein n=1 Tax=Eubacte... 144 4e-33 UniRef50_UPI000178A7F3 two component transcriptional regulator, ... 144 5e-33 UniRef50_Q8YSB8 Transcriptional regulator n=2 Tax=Nostocaceae Re... 144 5e-33 UniRef50_C6CSY2 Two component transcriptional regulator, AraC fa... 144 5e-33 UniRef50_B0NDZ7 Putative uncharacterized protein n=1 Tax=Clostri... 144 6e-33 UniRef50_A6TKQ3 Helix-turn-helix-domain containing protein, AraC... 144 6e-33 UniRef50_UPI0001C35FBC two component transcriptional regulator, ... 144 7e-33 UniRef50_C5VY46 AraC-family regulatory protein n=8 Tax=Streptoco... 144 7e-33 UniRef50_UPI0001788EC5 two component transcriptional regulator, ... 143 8e-33 UniRef50_A8RUC8 Putative uncharacterized protein n=1 Tax=Clostri... 143 8e-33 UniRef50_C6CXU8 Two component transcriptional regulator, AraC fa... 143 8e-33 UniRef50_C0C2A1 Putative uncharacterized protein n=1 Tax=Clostri... 143 9e-33 UniRef50_C6CZ23 Two component transcriptional regulator, AraC fa... 143 9e-33 UniRef50_A4XJ70 Transcriptional regulator, AraC family n=2 Tax=C... 143 1e-32 >UniRef50_P0ACI5 Xylose operon regulatory protein n=151 Tax=Gammaproteobacteria RepID=XYLR_ECO57 Length = 392 Score = 524 bits (1350), Expect = e-147, Method: Composition-based stats. Identities = 392/392 (100%), Positives = 392/392 (100%) Query: 1 MFTKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARIDKIKDWLGDGV 60 MFTKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARIDKIKDWLGDGV Sbjct: 1 MFTKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARIDKIKDWLGDGV 60 Query: 61 IADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVN 120 IADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVN Sbjct: 61 IADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVN 120 Query: 121 RFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQT 180 RFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQT Sbjct: 121 RFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQT 180 Query: 181 LPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGAR 240 LPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGAR Sbjct: 181 LPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGAR 240 Query: 241 QMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACK 300 QMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACK Sbjct: 241 QMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACK 300 Query: 301 GIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMC 360 GIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMC Sbjct: 301 GIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMC 360 Query: 361 GYPSLQYFYSVFKKAYDTTPKEYRDVNSEVML 392 GYPSLQYFYSVFKKAYDTTPKEYRDVNSEVML Sbjct: 361 GYPSLQYFYSVFKKAYDTTPKEYRDVNSEVML 392 >UniRef50_B3H2Y3 Xylose operon regulatory protein n=7 Tax=Gammaproteobacteria RepID=B3H2Y3_ACTP7 Length = 405 Score = 428 bits (1101), Expect = e-118, Method: Composition-based stats. Identities = 219/392 (55%), Positives = 300/392 (76%) Query: 1 MFTKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARIDKIKDWLGDGV 60 M K RI L FNANK YDRQV+EG+G+Y+QASQ W+IF+++DF R ++ L DG+ Sbjct: 13 MEKKSFRIALCFNANKVYDRQVIEGIGQYIQASQCIWNIFMQDDFTYRKQDLEGLLIDGI 72 Query: 61 IADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVN 120 IADFDD + L+D+++P++ VGGSY + YP + Y+ATDNYALVE+A LHLK+KG+N Sbjct: 73 IADFDDPETAALLSDMNIPVIAVGGSYQNPDYYPHIPYVATDNYALVETALLHLKQKGIN 132 Query: 121 RFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQT 180 RFAFYG+P K W+ ER+ AF L+ + +++ +Y G + +NW AQ+ L++WL + Sbjct: 133 RFAFYGIPSDEQKHWSVERKNAFIDLMEKYEHQTNIYLGHQVNAQNWLEAQSALSEWLAS 192 Query: 181 LPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGAR 240 LP QTGIIAVTDARARH+LQ CE+L+I VPE++ VIGIDNEEL ++LSRV+LSSV QG + Sbjct: 193 LPAQTGIIAVTDARARHLLQACEYLNIAVPEQISVIGIDNEELIQHLSRVSLSSVMQGTK 252 Query: 241 QMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACK 300 Q+GYQAAK+LH L + +++ +L+PP+RV +RRSTD+++ DP VIQAMHYI ++ACK Sbjct: 253 QIGYQAAKMLHHLFEGKKLSHSPVLIPPLRVEQRRSTDFQAFQDPFVIQAMHYIHHNACK 312 Query: 301 GIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMC 360 GIK +QVLD + ISRSNLE+RFK E+ +TIH +IH EKL +A+ +L T +SI EIS++C Sbjct: 313 GIKTEQVLDHLRISRSNLEQRFKHELNKTIHQVIHEEKLNRAKYMLQFTDISIQEISEIC 372 Query: 361 GYPSLQYFYSVFKKAYDTTPKEYRDVNSEVML 392 GYPSL YFYSVFKK Y TPK +R + ++++ Sbjct: 373 GYPSLPYFYSVFKKEYADTPKAFRQSHHKILV 404 >UniRef50_P45043 Xylose operon regulatory protein n=26 Tax=Gammaproteobacteria RepID=XYLR_HAEIN Length = 387 Score = 421 bits (1083), Expect = e-116, Method: Composition-based stats. Identities = 220/384 (57%), Positives = 287/384 (74%) Query: 1 MFTKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARIDKIKDWLGDGV 60 M + ++I LLFNANK YDRQVVEG+G+Y+QASQ WDIF+E++F D I DG+ Sbjct: 1 MTEQYYKIALLFNANKVYDRQVVEGIGQYIQASQCMWDIFVEDEFIYHTDTINQLSIDGI 60 Query: 61 IADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVN 120 IADFDD + + L +P + VGGSY A+ YP YIATDN ALVE A HL+EKG++ Sbjct: 61 IADFDDPKTVELLQHTLIPTIAVGGSYKQADFYPHFPYIATDNMALVEMALSHLQEKGLS 120 Query: 121 RFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQT 180 +FAFYGL ++ K W+ ER AF +L+ + Y +Y+G++ +NW Q +L WL++ Sbjct: 121 QFAFYGLQVNTHKHWSIERRDAFVELMEKNHYPIYLYEGVQVHAQNWLEEQQKLIVWLKS 180 Query: 181 LPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGAR 240 LP TGIIAVTDARARH+LQ CE+ I VPE+LCV+GIDNEEL +YLSR++LSSV QG R Sbjct: 181 LPSHTGIIAVTDARARHLLQACEYSKIAVPEELCVVGIDNEELIQYLSRMSLSSVEQGTR 240 Query: 241 QMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACK 300 ++GYQAAKLLH+LL+ +++ IL+PP+ V R STDYRSLTDP VIQAMHYIR+ AC Sbjct: 241 EIGYQAAKLLHKLLNGQKVSHTPILIPPITVHSRNSTDYRSLTDPLVIQAMHYIRHRACH 300 Query: 301 GIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMC 360 IKV QVLD + SRSNLE+RFK E+ +TIH +IH EK+ +A++LL T +SI EI+++C Sbjct: 301 RIKVGQVLDHLETSRSNLEQRFKNEMNKTIHQVIHEEKISRAKNLLQQTDISIKEITEIC 360 Query: 361 GYPSLQYFYSVFKKAYDTTPKEYR 384 GYPS+QYFYSVFKK ++ TPKE+R Sbjct: 361 GYPSIQYFYSVFKKEFEMTPKEFR 384 >UniRef50_B2JFF0 Transcriptional regulator, AraC family n=39 Tax=cellular organisms RepID=B2JFF0_BURP8 Length = 414 Score = 400 bits (1028), Expect = e-110, Method: Composition-based stats. Identities = 195/383 (50%), Positives = 261/383 (68%), Gaps = 1/383 (0%) Query: 4 KRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARIDKIKDWLGDGVIAD 63 + HRI LLFNANK YDR+++ G+G YL +++ WD+F+EEDFRAR++ I+ + GDG IAD Sbjct: 9 RTHRIALLFNANKVYDREIITGIGNYLLSTRVAWDLFLEEDFRARLNGIEHFEGDGFIAD 68 Query: 64 FDDKQIEQALADVDVPIVGVGGSYHLAESYPP-VHYIATDNYALVESAFLHLKEKGVNRF 122 FDD + +AL+D +P+V VGGSY A +YPP + YIATDN LV A+ HL G+ RF Sbjct: 69 FDDPAVCEALSDSLLPVVAVGGSYEDAAAYPPNLPYIATDNMQLVSLAYKHLIGAGLQRF 128 Query: 123 AFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQTLP 182 A Y LPES RWA ERE AF L+ + G V++GL T+ W A +L +WLQ+LP Sbjct: 129 ALYSLPESPTNRWAQERERAFNALLKADGLEGDVHRGLPTSAPVWHQASVQLTEWLQSLP 188 Query: 183 PQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQM 242 GIIAVTDARAR +LQ C IPVPE++ +IGIDN+ LTR L+R+ LSSV QG +M Sbjct: 189 KPVGIIAVTDARARQLLQACLISGIPVPEQVAIIGIDNDPLTRSLTRIPLSSVIQGTEEM 248 Query: 243 GYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGI 302 G AA LLH++L +RILVPPV + ST + L P V++A HYIR +AC+GI Sbjct: 249 GRTAAHLLHQMLGGARFAGRRILVPPVGINVCESTKHEPLASPYVMRARHYIRQYACQGI 308 Query: 303 KVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGY 362 K +QV D VG+SRS+LE F+ E+G T+H I KL+ A+ LL +S E++ CG+ Sbjct: 309 KTEQVADYVGVSRSSLEDYFRRELGCTVHQEILKHKLDVAKQLLAQQDMSSAEVAIRCGF 368 Query: 363 PSLQYFYSVFKKAYDTTPKEYRD 385 SLQY Y+VF++ D TP+EY++ Sbjct: 369 TSLQYMYAVFRRELDCTPREYQE 391 >UniRef50_A4A1D2 Xylose operon regulatory protein n=3 Tax=Planctomycetaceae RepID=A4A1D2_9PLAN Length = 390 Score = 397 bits (1020), Expect = e-109, Method: Composition-based stats. Identities = 126/388 (32%), Positives = 206/388 (53%), Gaps = 12/388 (3%) Query: 4 KRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIE--EDFRARIDKIKDWLGDGVI 61 +R R+ L+ + Y R+V+ G+ Y+ A W I+++ E ++ W GDG+I Sbjct: 2 QRRRVMLIVETSLVYGREVLRGINRYVVA-NEPWSIYVDLRELVVRPPAWLEKWEGDGII 60 Query: 62 ADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNR 121 + + L + +P V + Y + I T++ A+ + HL E+G Sbjct: 61 TRSTTPSLAEKLRALKIPTVDLTDIY----GSQGLPQIGTNHEAVGKMGAQHLLERGFRH 116 Query: 122 FAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQG--LETAPENWQHAQNRLADWLQ 179 FAF G +G W++ R+ F+ +V + + YQ T W Q+++ WL+ Sbjct: 117 FAFCGF---TGHNWSSRRQEGFKTVVTKAGFDFHQYQSPWDTTTALTWDEQQSQIVRWLE 173 Query: 180 TLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGA 239 +LP GI+A D R +H+L C + + VPE++ VIG+DN+EL L LSS+ Sbjct: 174 SLPRPAGIMACNDMRGQHVLDACRRIGVAVPEEIAVIGVDNDELVCDLCDPPLSSIMPNP 233 Query: 240 RQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHAC 299 +++GY+AA +L L+ E+ L+ P+ V+ R+STD ++ DP V A+ YIR HAC Sbjct: 234 QRIGYEAASMLDALMRGEKPKQMNKLIEPIGVVTRQSTDVLAIDDPLVASAVKYIRQHAC 293 Query: 300 KGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQM 359 GI V++VL V +SRS LE+RF++ +G + + I A +L++ R LL T L + I+ + Sbjct: 294 DGISVEEVLKQVPVSRSILERRFRKYIGRSPQSEIRAVQLKRVRQLLRETDLPLERIATL 353 Query: 360 CGYPSLQYFYSVFKKAYDTTPKEYRDVN 387 GY +Y VFK+ TP +YR N Sbjct: 354 AGYDHPEYMSVVFKRELGQTPGQYRTQN 381 >UniRef50_A3ZY76 Xylose operon regulatory protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZY76_9PLAN Length = 387 Score = 375 bits (964), Expect = e-102, Method: Composition-based stats. Identities = 121/387 (31%), Positives = 189/387 (48%), Gaps = 10/387 (2%) Query: 7 RITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDF--RARIDKIKDWLGDGVIADF 64 R+ LL ++ Y R ++ G+ + Q W I+ + + +W GDG++A Sbjct: 6 RVALLIETSREYGRGLLRGISRF-QREHGPWSIYFQPRGANEPVPTWLANWNGDGILARV 64 Query: 65 DDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRFAF 124 +D+++ QA+ VP V + A + + DN ALV A H ++G RFAF Sbjct: 65 EDRRMAQAIQKTGVPAVDL----RFAVPNLKMPGVGVDNLALVSLALDHFLDRGFTRFAF 120 Query: 125 YGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETA--PENWQHAQNRLADWLQTLP 182 G P W R F LV ++ YR V+ P W+ Q +L W++ L Sbjct: 121 CGYPTGEFI-WMDLRAKLFHDLVVQKGYRCEVFPQDLKIAKPRTWEQDQRQLVRWIRKLE 179 Query: 183 PQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQM 242 I+A D+R + +L C VP L V+G+DN+E LS LSS+ ++ Sbjct: 180 KPVAIMACNDSRGQQLLDACRRAEADVPNDLSVLGVDNDEFLCGLSTPPLSSIDINTERI 239 Query: 243 GYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGI 302 GY AA+LL L++ P + +L P VI RRSTD ++ D + Y R +AC+GI Sbjct: 240 GYYAAELLQSLMNGAPAPSEPVLFPAEAVIARRSTDSFAVEDEEFAAVLRYFRENACQGI 299 Query: 303 KVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGY 362 ++ + A G+ R LE+R K +G + + K+E++R LL+ T +SI I+Q G+ Sbjct: 300 RMADITKATGMERRTLERRMKSTLGRSPKDELIRIKIEESRRLLVRTDMSIKNIAQAAGF 359 Query: 363 PSLQYFYSVFKKAYDTTPKEYRDVNSE 389 + +YF VF+ TTP YR E Sbjct: 360 SNSRYFSRVFQSRVGTTPLAYRKSTHE 386 >UniRef50_A6C655 Xylose operon regulatory protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C655_9PLAN Length = 381 Score = 373 bits (958), Expect = e-102, Method: Composition-based stats. Identities = 120/382 (31%), Positives = 195/382 (51%), Gaps = 10/382 (2%) Query: 12 FNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRAR--IDKIKDWLGDGVIADFDDKQI 69 ++ Y R ++ GV +Y+Q W I + I W GDG+IA D + Sbjct: 1 METSRGYGRGILHGVWQYIQ-EHETWSILYRPCGFGQVAPSWISSWDGDGIIAFIDTAKT 59 Query: 70 EQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRFAFYGLPE 129 + L VP V + G P V ++A DN + E A + ++G FA G Sbjct: 60 ARLLKQSGVPTVDLLGEL---IPKPQVPFVAPDNQQVAELAVQYFLDRGYQSFAACGF-R 115 Query: 130 SSGKRWATEREYAFRQLVAEEKYRGVVY--QGLETAPENWQHAQNRLADWLQTLPPQTGI 187 + + +R F+Q + E ++ +G +W+ Q ++A WLQ LP + Sbjct: 116 TGLRPMLDQRCLKFQQQIQETGAECALFTPRGGGKEGPSWEREQEQIARWLQGLPKPLAL 175 Query: 188 IAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAA 247 D R R +L C+ +I VPE++ V+G+ N+++ LS LSS+ +++GYQAA Sbjct: 176 FTCNDTRGREVLNACQTHNISVPEEVAVLGVGNDDILCQLSDERLSSIDVDPQRVGYQAA 235 Query: 248 KLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQV 307 +L L+ ++ +P +PP RV+ R STD ++TDP + A+ YIR +AC+ I+V+ V Sbjct: 236 AVLDSLMHQKPVP-DLTFIPPRRVVSRHSTDSLAVTDPELATAIQYIRRYACRQIQVEDV 294 Query: 308 LDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQY 367 + V + R LE+RF++ +G + A I +L +AR LL TTLS EI+ CG+ S Y Sbjct: 295 VKQVNLERRVLERRFRKLLGRSPKAEIIRLQLVRARELLAETTLSNTEIAYRCGFNSAAY 354 Query: 368 FYSVFKKAYDTTPKEYRDVNSE 389 F +F++ TP E+R + Sbjct: 355 FMDLFRRKVGQTPGEFRQTSQS 376 >UniRef50_B4CYR5 Transcriptional regulator, AraC family n=2 Tax=Verrucomicrobia RepID=B4CYR5_9BACT Length = 406 Score = 372 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 123/385 (31%), Positives = 197/385 (51%), Gaps = 10/385 (2%) Query: 2 FTKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRA--RIDKIKDWLGDG 59 T+ ++ LL + AY R+++ GV EY++ W++ + E R + DW GDG Sbjct: 10 TTRPPKVALLVETSNAYARELLLGVKEYIRV-HGPWNVHLSEHSRGDRPPSWLIDWDGDG 68 Query: 60 VIADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGV 119 VIA ++KQI +AL + VP+V +LA + TDN A+ AF H E+G Sbjct: 69 VIARVENKQIARALEALRVPVVDFSSHRYLA----GAPVVTTDNAAIARLAFDHFIERGF 124 Query: 120 NRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQ 179 FA+ G+ + W+ R F +LV Y + + +A WL+ Sbjct: 125 QHFAYCGVDRFA---WSVARGGHFDELVRRAGLICEHYADPAGFGPDSDAETDAIAQWLR 181 Query: 180 TLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGA 239 LP + A DAR + +L C+ + VP+++ V+G+DN+ L LS LSSV Sbjct: 182 GLPAPVAVFACYDARGQQLLDACQRAGLAVPDQIAVLGVDNDSLLCELSPPPLSSVMLDT 241 Query: 240 RQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHAC 299 R+ G++AA LL RL+ + + +PP+ V R+STD ++ DP + + + IR AC Sbjct: 242 RRTGWEAADLLSRLMQGQRTKAEVHRIPPLGVFTRQSTDIHAVEDPKIARVLQIIREQAC 301 Query: 300 KGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQM 359 G+ V ++L +SR LE+R KE +G H I ++ + + LL +T LS+ EI++ Sbjct: 302 AGLTVPELLRKCPMSRRVLEQRMKEVLGRAPHEEIVRVQIRRVQDLLRTTELSLEEIAER 361 Query: 360 CGYPSLQYFYSVFKKAYDTTPKEYR 384 G+ + QY VFK+ P E+R Sbjct: 362 SGFRNAQYLSVVFKREVGQPPSEFR 386 >UniRef50_Q7UYL2 Xylose operon regulatory protein n=4 Tax=Planctomycetaceae RepID=Q7UYL2_RHOBA Length = 391 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 124/393 (31%), Positives = 207/393 (52%), Gaps = 12/393 (3%) Query: 2 FTKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARID--KIKDWLGDG 59 K+ + LL + AY R ++ G+ Y+ W I++ E R + DW GDG Sbjct: 7 MPKQKAVALLIETSNAYARGLLGGIASYIH-EHDLWSIYLVEQERGAAPPSWLNDWDGDG 65 Query: 60 VIADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGV 119 +IA ++++I ++ ++ +P+V V A P + ++ T++ A+ E A+ H +E+G Sbjct: 66 LIARIENEEIASSVRNLKIPVVDVSA----ARRIPNIPWVETNDVAIGELAYQHFRERGF 121 Query: 120 NRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQ--GLETAPENWQHAQNRLADW 177 FAF G S W+ R AF V E+ ++ + + P++ + ++RLA+W Sbjct: 122 ENFAFCG---ESRFNWSILRRQAFEARVKEDGFQCQSFNFNVDDRRPQSLKRERDRLAEW 178 Query: 178 LQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQ 237 + +L G++A D A+ IL VC I VP +L ++G+DN+EL L LSSV Sbjct: 179 VLSLQHPIGVLACYDIMAQKILDVCRLHGIKVPSELALLGVDNDELLCDLCTPPLSSVVP 238 Query: 238 GARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNH 297 A Q G +AA LL ++ EE+ + L+ P+ V R+STD ++ DP + A+ +IR+H Sbjct: 239 AAHQTGREAASLLDAMMRGEEVHAEPHLIEPLGVATRQSTDVLAIKDPEIAAAVRFIRDH 298 Query: 298 ACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEIS 357 C GI V V+ V +SR E RF +G T H I ++E+ R LLI T L++ +IS Sbjct: 299 CCDGINVQDVVKKVPLSRRVFESRFLALMGRTPHQEITRRRIERVRYLLIETDLTLVQIS 358 Query: 358 QMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSEV 390 + G+ + +Y F++A P YR ++ Sbjct: 359 RRTGFQNHEYMSVAFRRAMGHPPATYRRKFRKI 391 >UniRef50_A6CF05 Xylose operon regulatory protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CF05_9PLAN Length = 386 Score = 364 bits (935), Expect = 3e-99, Method: Composition-based stats. Identities = 114/389 (29%), Positives = 202/389 (51%), Gaps = 10/389 (2%) Query: 2 FTKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFI--EEDFRARIDKIKDWLGDG 59 ++ R+ +L + + + R ++ G+ + Q W + + + ++ DG Sbjct: 1 MQEQSRVAILIDTSSGHGRGLLNGMIRF-QREIGSWSVIFRSHQPDQPAPAWLQKADIDG 59 Query: 60 VIADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGV 119 V+A KQ+ L +P++ + + + TDN +VE A HL ++G+ Sbjct: 60 VLARIPHKQMADILRKRRLPVIDMPYTREG----FGFPSLFTDNQKIVELAAQHLLDRGI 115 Query: 120 NRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVY--QGLETAPENWQHAQNRLADW 177 F F G P R ER F Q +A+ ++ Q +W++ Q +A+W Sbjct: 116 RHFGFCGWPRGLNSR-MDERCDLFVQTLADAGCTCSLFPEQNDRWDASHWENDQQGIAEW 174 Query: 178 LQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQ 237 L TLP G++A D R +H+L+ C+ + + VP+++ VIG DN++L LS L+S+ Sbjct: 175 LITLPKPAGVMACYDDRGQHVLEACQIVGLKVPDEVAVIGSDNDDLICKLSSPPLTSIDA 234 Query: 238 GARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNH 297 G ++GY+AA LL +++ + E P L PP R+++R+ST+ ++ D + A+ +IR+H Sbjct: 235 GFERIGYEAASLLEQMMKQGEQPEPVQLFPPARLVQRQSTNIVAVEDQDLAAALRFIRDH 294 Query: 298 ACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEIS 357 A + I V+ +L V ISRS+LE+R K+ +G T I +LE+ + LL T LS+ EI+ Sbjct: 295 ASQRITVEDILAEVPISRSSLERRMKKFIGRTPKEEILRVQLERVQQLLAETQLSLTEIA 354 Query: 358 QMCGYPSLQYFYSVFKKAYDTTPKEYRDV 386 G+ Y ++FK+ + TP +R Sbjct: 355 FKTGFDHPHYLAALFKRKFQQTPGSFRRA 383 >UniRef50_A6C3C2 Xylose operon regulatory protein n=2 Tax=Planctomycetaceae RepID=A6C3C2_9PLAN Length = 405 Score = 362 bits (930), Expect = 1e-98, Method: Composition-based stats. Identities = 109/385 (28%), Positives = 208/385 (54%), Gaps = 12/385 (3%) Query: 6 HRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFR--ARIDKIKDWLGDGVIAD 63 + LL ++++ R ++ G+ +++ A + EW +F+ + I W GDG++ Sbjct: 27 PHVALLIETSRSHGRGLLNGIRQFI-AEKEEWSVFLMPRSLDSQVPEWISRWKGDGILCR 85 Query: 64 FDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRFA 123 +++ A+ +P + + + L S+P ++ DN A+ H E+G+ F Sbjct: 86 TTSQEMADAITKSGIPALELRST-KLKHSFP---FLGIDNRAMGRMVAEHFLERGIRHFG 141 Query: 124 FYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETA--PENWQHAQNRLADWLQTL 181 Y E + + +R + Q + Y V+ + + P W+ Q ++ W+ L Sbjct: 142 VY---EIGCEVYFEQRCENYIQTINNAGYEVSVFSSPDDSEVPREWEKHQEKMVKWVSGL 198 Query: 182 PPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQ 241 P G++A TD +L C+ I VP+++ V+G +N+++ ++R LSSVA + + Sbjct: 199 PKPAGVMACTDLLGFWLLDACDRAGISVPDEVAVVGAENDDILCMMARPPLSSVAYNSTR 258 Query: 242 MGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKG 301 +GY+AA LL R++ +P + L+ P+ ++ R+S+D ++ DP + A+ +IR +ACKG Sbjct: 259 IGYEAAALLSRIMKGGSVPEEPYLLKPLGIVTRQSSDVVAVDDPELALALRFIRENACKG 318 Query: 302 IKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCG 361 I+V +L AV +SR+ LE++ K +G + A I ++E+A+ LL ST LS+++I+Q G Sbjct: 319 IQVTDILKAVPMSRTALERQMKSAIGRSPKAEIIRTQIERAKELLASTDLSLSQITQRIG 378 Query: 362 YPSLQYFYSVFKKAYDTTPKEYRDV 386 + Q+F ++FK+ TP E+R Sbjct: 379 FRHTQHFSTLFKEKVGETPGEFRSQ 403 >UniRef50_A6CCU7 Xylose operon regulatory protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CCU7_9PLAN Length = 395 Score = 361 bits (926), Expect = 3e-98, Method: Composition-based stats. Identities = 111/385 (28%), Positives = 188/385 (48%), Gaps = 8/385 (2%) Query: 5 RHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIE-EDFRARIDKIKDWLGDGVIAD 63 R R+ LL + + RQV+EGV EY AS WD IE F ++ W GDGVI Sbjct: 5 RWRVALLVQTSSEWSRQVLEGVAEYA-ASNGGWDFRIEPRGFYEKLRLPLTWEGDGVICR 63 Query: 64 FDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRFA 123 D ++ + L ++P V V + P V D A A + + G F Sbjct: 64 LTDPELIEELHSRNIPAVNVSWKGLNSNDIPNVIS---DEAACGRLAADYFIQNGWTNFG 120 Query: 124 FYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQ-GLETAPENWQHAQNRLADWLQTLP 182 F G P +++ + ++ QL+A Y ++ L +++ + + WL +LP Sbjct: 121 FVGPPP--NQKYTDVTQKSYSQLLAAGGYHTYQFEHSLGYGKLSFEDQRPEMEKWLLSLP 178 Query: 183 PQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQM 242 + T + I+ C HL + VP + ++ ++ + L LS V ++ + Q ++ Sbjct: 179 KPIALFVWTTTMGQEIMLFCRHLGLSVPNDVAILAVELDPLISSLSPVPIAYIDQSPHRV 238 Query: 243 GYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGI 302 G +AAKLL +++ E P + +L+PP ++ R+S D D V A+ +IR + Sbjct: 239 GMEAAKLLQKMIQGEPAPEKSVLIPPSGIVARQSVDTLLGEDEHVRNAIEFIRKKIALPM 298 Query: 303 KVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGY 362 +V+ V +AV +SR +LE RF++ +G++ MI KL +A +LL+ T L+I EI++ G+ Sbjct: 299 QVEDVANAVSLSRRSLENRFQKTLGKSPAQMIRESKLSRAMNLLMETNLTIQEIAERTGF 358 Query: 363 PSLQYFYSVFKKAYDTTPKEYRDVN 387 ++ F FK+ P YRD Sbjct: 359 FHVETFARFFKRETGKPPSLYRDKK 383 >UniRef50_A6C615 Xylose operon regulatory protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C615_9PLAN Length = 384 Score = 358 bits (920), Expect = 1e-97, Method: Composition-based stats. Identities = 120/385 (31%), Positives = 210/385 (54%), Gaps = 12/385 (3%) Query: 6 HRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEE--DFRARIDKIKDWLGDGVIAD 63 ++ + +K + R++++G+ Y + + W I+I+E + IK W GDG+IA Sbjct: 7 PQVAIFIETSKTFGREILQGISTYSR-THGPWSIYIDEWGPQTPLPEWIKTWQGDGIIAR 65 Query: 64 FDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRFA 123 +Q+ + LA + VP+V E + + D+ + + AF HL ++ + +FA Sbjct: 66 VRSRQMAERLARLRVPVVDTLQQVPELE----MPAVFADDTLIAKLAFEHLHDRHLRQFA 121 Query: 124 FYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAP--ENWQHAQNRLADWLQTL 181 F G+ +++ W+ R AF ++ E+ + +Y L E+W Q+ LADWL+ L Sbjct: 122 FVGVEKAN---WSHRRRDAFAEIACEQGFTCEIYSPLSRRRFAESWNGGQDDLADWLEAL 178 Query: 182 PPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQ 241 P G+ A D RA +L C I +PE++ V+G+DN+++ + L+S+A A++ Sbjct: 179 PKPIGLFAAHDLRALCVLDACRRRDIAIPEQVAVVGVDNDDVFCEVVDPTLTSIALQAKE 238 Query: 242 MGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKG 301 +GYQ+A LL +L+ + VPP +I RRST+ ++ DPA+ A+ IR AC+ Sbjct: 239 IGYQSAALLDQLMRGNPPAQYPLPVPPRILIPRRSTNMIAVEDPAIASALELIRRKACEK 298 Query: 302 IKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCG 361 I V + V ++R +LE+R + VG+T H +I E++ +AR LLI T ++ +I+QM G Sbjct: 299 ISVSMIASQVNLTRRSLERRLMKLVGKTPHQLISEERVRRARQLLIDTDFTLEQIAQMAG 358 Query: 362 YPSLQYFYSVFKKAYDTTPKEYRDV 386 + S Y + K+ + TP E+R Sbjct: 359 FSSAAYLSVIIKEHENCTPTEFRQK 383 >UniRef50_C5BYV3 Transcriptional regulator, AraC family n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5BYV3_BEUC1 Length = 401 Score = 358 bits (919), Expect = 2e-97, Method: Composition-based stats. Identities = 115/388 (29%), Positives = 203/388 (52%), Gaps = 13/388 (3%) Query: 1 MFTKRHR-ITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARID--KIKDWLG 57 M +R R + LL + AY R ++ GV +Y+ A + W +++ E R D ++ W G Sbjct: 1 MPPRRTRHVALLVETSNAYARGLLAGVRKYV-AGDAGWSLYLAEHSRHETDFSWLEGWEG 59 Query: 58 DGVIADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEK 117 DGV+A ++ + + + +D+P V + AE + TD+ A+ A H E+ Sbjct: 60 DGVLARIENVETARFIRRLDLPTVDLSAGRLAAE----LPGAETDDRAIARLAVEHFTER 115 Query: 118 GVNRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADW 177 G+ FAF G W+ +R + V E +R + + + RLA+W Sbjct: 116 GLRHFAFCG---DERFAWSIKRSTWYSHYVRELGHRPQTFAMKSSGMRAV--DRERLAEW 170 Query: 178 LQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQ 237 L+ LP G++A D + +L+ C+ ++ VP+ + V+G+DN+EL L+ ALSS+ Sbjct: 171 LRGLPKPVGVLACYDIAGQEVLEGCKIANLAVPDAVAVLGVDNDELVGTLTSPALSSIEP 230 Query: 238 GARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNH 297 + GY AA++L ++ E+ L+ P+RV+ R+S+D S++DP V +A+ YIR+ Sbjct: 231 DTTRTGYLAAEMLDLMMGGRELDPGLRLIEPLRVVARQSSDIFSVSDPLVAEALRYIRDR 290 Query: 298 ACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEIS 357 + + + V++VL VG+SR +L+ RF + +G T+H I ++ LL ST ++ +I+ Sbjct: 291 SDQNLAVEEVLRHVGLSRRSLDHRFAQTLGRTVHGEIVRVRMGHVAELLSSTDWTLPQIA 350 Query: 358 QMCGYPSLQYFYSVFKKAYDTTPKEYRD 385 + + +Y FKK +P YR Sbjct: 351 ERLEFSHSEYMGVAFKKYTGKSPGRYRR 378 >UniRef50_B5JFL8 Transcriptional regulator, AraC family protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JFL8_9BACT Length = 385 Score = 355 bits (912), Expect = 1e-96, Method: Composition-based stats. Identities = 105/390 (26%), Positives = 200/390 (51%), Gaps = 13/390 (3%) Query: 4 KRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARIDK--IKDWLGDGVI 61 RI +L + RQ+V G+ + + +++W IF + I++W GDG+I Sbjct: 2 PSKRIAILVETSLDSGRQIVRGISRFAR-ERNDWSIFYHTGPLGAMAPASIENWEGDGII 60 Query: 62 ADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNR 121 A + ++ + P V V G+ A+ + D+ A+ HLK++G Sbjct: 61 ARIANPKLHSLVKTRQTPAVDVLGNVPEADY----PIVKCDDRAISALVGNHLKDRGFRH 116 Query: 122 FAFYGLPESSGKRWATEREYAFRQLVAEE---KYRGVVYQGLETAPENWQHAQNRLADWL 178 AF+GL + + W+ R+ ++ E K + +E ++W R+ W+ Sbjct: 117 IAFFGL---NNEIWSVNRKIELQRFCDRELGSKLDTLEVDHIERDSQSWPDYTARIRTWI 173 Query: 179 QTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQG 238 + LP GI+ +D +L C+ + VP+++ ++G+DN+ + + LSSV Sbjct: 174 EALPKPVGIMVASDQFGPDLLGACQASGLSVPDQVALVGVDNDLPFCEICQPQLSSVEPN 233 Query: 239 ARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHA 298 +GY+AA++L +L+ P + +PP + R+S+D +L DP++++A+ YIR HA Sbjct: 234 HELVGYEAARILDTILETGSAPQSIVEIPPRLLHVRQSSDATALEDPSLVKALRYIRAHA 293 Query: 299 CKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQ 358 C + VD + G+SRS L++RF+ + +T+ I A ++ +A+ +L +T L++ ++++ Sbjct: 294 CDPVSVDDIAREAGVSRSVLQRRFRNSLNQTVLEAILAVRINRAKEMLATTRLALPDVAE 353 Query: 359 MCGYPSLQYFYSVFKKAYDTTPKEYRDVNS 388 CG+ +Y VFKK TP +YR ++ Sbjct: 354 RCGFRHQEYLGYVFKKRIGCTPGQYRTKHT 383 >UniRef50_C1ZFQ8 Transcriptional regulator n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZFQ8_PLALI Length = 409 Score = 355 bits (910), Expect = 2e-96, Method: Composition-based stats. Identities = 103/390 (26%), Positives = 188/390 (48%), Gaps = 9/390 (2%) Query: 1 MFTKRHR-ITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIE-EDFRARIDKIKDWLGD 58 M HR + L+ + + + RQV+ G+ +Y WD FIE ++ K W GD Sbjct: 26 MPPTMHRSVALIVHTSSDWTRQVLRGIAQYAS-EHGFWDFFIEPRGHDEKLLIPKGWSGD 84 Query: 59 GVIADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKG 118 G+IA +E+ + ++P V V + + + + +D A A H E+ Sbjct: 85 GIIARLTHPALEKQILKSNLPCVNVSW---MGQHSLRIPKVVSDEAACGRLAAEHFLEQS 141 Query: 119 VNRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAP-ENWQHAQNRLADW 177 FA+ G +G + + + + ++ +YQ P + + W Sbjct: 142 FRSFAYIGPIHRAG--YDDLLGKNYINTLLQAGHQTSIYQPTVPIPVPDLLTQRKGFLQW 199 Query: 178 LQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQ 237 L+ LP T I + R ++ +P+ + ++ +N+ L L+ V LS++ Q Sbjct: 200 LKMLPKPTAIFTWSGEVGRELMTCARLSRFRIPDDIALLVGENDPLLSALAPVPLSNIDQ 259 Query: 238 GARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNH 297 ++GY+AA LL +L++ E P + ILVPPV V++RRST+ ++ DP V A+ ++R+H Sbjct: 260 APVRVGYEAATLLDKLMNGEPAPEEPILVPPVGVVQRRSTETSAVDDPLVDMAVRFMRDH 319 Query: 298 ACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEIS 357 + I++ V A+ +SR LE RF + + +T ++ +L+ + LL TTL + I+ Sbjct: 320 LSEPIQIADVEKALNVSRRVLEHRFHKVLDDTPANVLRRMRLQNVKRLLGETTLPLARIA 379 Query: 358 QMCGYPSLQYFYSVFKKAYDTTPKEYRDVN 387 Q+ G+ ++ F++ TP EYR + Sbjct: 380 QLTGFNHVEVLVRTFRRELGVTPGEYRRRH 409 >UniRef50_A3ZQ62 Xylose operon regulatory protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZQ62_9PLAN Length = 391 Score = 352 bits (904), Expect = 1e-95, Method: Composition-based stats. Identities = 109/390 (27%), Positives = 189/390 (48%), Gaps = 15/390 (3%) Query: 2 FTKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDF-RARIDKIKDWLGDGV 60 + + LL +++ Y R + GV +Y + ++ + +E A + I+ W DGV Sbjct: 6 PPRSQVVLLLIESSRGYGRACLHGVADYCRIHRNWQILHVERRLNEALPEAIQHWNIDGV 65 Query: 61 IADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVN 120 I + + + + + P V + GSY TD+ A E A H E+G+ Sbjct: 66 ITRIETDDVMETIDRLGRPTVDLRGSYFPQRG----ATFDTDHAACAEMAVEHFVERGLR 121 Query: 121 RFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENW------QHAQNRL 174 A+ G P G ++ R F ++ + R + G + + + N L Sbjct: 122 DIAYCGYP---GIDFSDLRAAPFERIARQHGCRTHSFVGSQVDRDAMVRELLGESETNEL 178 Query: 175 ADWLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSS 234 W+Q+LP GI+ D RAR +L C+ + VPE + ++GIDN+ L LSS Sbjct: 179 GKWVQSLPRPCGILGCNDVRARQVLMSCKLAGVAVPEDIALLGIDNDLTICNLVTPLLSS 238 Query: 235 VAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYI 294 + A ++GY+ A L RL+ E++ + +L+PP ++ R S+D ++ D V +HYI Sbjct: 239 IEPDAHRIGYEGAASLDRLMKGEQVE-KHVLIPPKSIVVRGSSDVMAIADREVAAIVHYI 297 Query: 295 RNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSIN 354 HAC G+ V+ + + +SRS+L++RF++E+G I + I +++ A++LL T L + Sbjct: 298 SEHACSGLSVEMIANQFHLSRSSLDRRFQQELGRGIKSEIDRVRIDHAKALLRYTDLKLI 357 Query: 355 EISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 I+ Y S S FK+ TP +R Sbjct: 358 AIAHHTSYSSAAKLVSAFKRITGVTPGAFR 387 >UniRef50_Q7UHK5 Xylose operon regulatory protein n=2 Tax=Planctomycetaceae RepID=Q7UHK5_RHOBA Length = 416 Score = 347 bits (890), Expect = 4e-94, Method: Composition-based stats. Identities = 111/389 (28%), Positives = 192/389 (49%), Gaps = 10/389 (2%) Query: 2 FTKRHR-ITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFI-EEDFRARIDKIKDWLGDG 59 T R R + +L + ++ R VVE + + S+W + I D + R+ K W GDG Sbjct: 34 TTPRPRHVGILVETDDSWGRNVVEAICRF--GHSSDWTVLISPRDSQGRLRLPKVWNGDG 91 Query: 60 VIADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGV 119 +IA + + +++P+V VG + + +ATD+ A + AF HL+E+G+ Sbjct: 92 IIASLRTASSVRHVKSLNLPVVDVGIMIPKCDWF---ARVATDDAARAKMAFEHLRERGL 148 Query: 120 NRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQ 179 FA Y P R++ R AF V E Y +Y+ W + + WL Sbjct: 149 THFACYAPPIG---RYSDVRSAAFVHAVTEGGYECAMYEAPHDDSAGWLTNYSNVRRWLS 205 Query: 180 TLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGA 239 TLP GI A AR ++++C I +P++L V+ D++EL ++ +S+V + Sbjct: 206 TLPRPLGIFAADPYPARQLVEICSADSIRIPDELSVLSGDDDELLCNVATPQISAVELAS 265 Query: 240 RQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHAC 299 Q+G A+++L +++ P + L+PP++V R STD ++ D + + + YIR+ A Sbjct: 266 HQIGETASRMLAKMMSGSATPKRERLIPPLQVRGRHSTDILAIPDNEIAEILRYIRDKAR 325 Query: 300 KGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQM 359 GI V +L+ ISR LE+RF+ E+ + I ++ LL+ + I+ I+ Sbjct: 326 DGITVTDLLNEFPISRRRLEQRFRAELNRSPAEEIRRVRMSHVARLLLDSDKPISTIAYE 385 Query: 360 CGYPSLQYFYSVFKKAYDTTPKEYRDVNS 388 G+ + F++ + TTP EYR N Sbjct: 386 SGFATGASLSQAFRQHFGTTPGEYRRQNH 414 >UniRef50_D2QUQ8 Transcriptional regulator, AraC family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QUQ8_9SPHI Length = 387 Score = 347 bits (890), Expect = 5e-94, Method: Composition-based stats. Identities = 105/388 (27%), Positives = 182/388 (46%), Gaps = 16/388 (4%) Query: 5 RHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFI-------EEDFRARIDKIKDWLG 57 H+I LL + ++ Y + +++G+ +Y + W +D ++W Sbjct: 1 MHKIILLIDFSEEYSKSLLKGITKYSR-EHGPWVFCRMPLFHRETMGIDGILDWAREWEA 59 Query: 58 DGVIADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEK 117 DG++ + + + +P++ E + + I + +K Sbjct: 60 DGIVGQLYNDVSVEKIVQAGIPVIA----QDFKERFTDIPNITGAYRETGAMGAEYFLKK 115 Query: 118 GVNRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLE-TAPENWQHAQNRLAD 176 G FAFYG S W+ ER F + V Y+ ++ + + E W + + L++ Sbjct: 116 GFQHFAFYGF---SNIVWSRERAEGFEERVTRAGYQVTYFEHEKARSSELWYYKPSSLSE 172 Query: 177 WLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVA 236 WL +LP I+ D +HI + C H I +PE++ V+G+DN+E+ LS LSS+ Sbjct: 173 WLASLPKPIAIMTCDDRLGQHITEACRHSGIRIPEEVAVLGVDNDEMFCELSDPPLSSIT 232 Query: 237 QGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRN 296 A + GY AA LL RL+ KE I+V P +VI R+STD + D + ++ YI Sbjct: 233 LDAEKGGYDAAHLLDRLIRKEITQGYDIVVEPTQVITRQSTDIYATPDEYIAVSLKYIHQ 292 Query: 297 HACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEI 356 + K ++VD V+ V +SR +LE RF++ +G I+ I ++EK L+ T ++ EI Sbjct: 293 NIDKNLQVDDVVKQVPLSRRSLEMRFQQVIGYPIYKYIQNLRIEKFSKKLLETDQAVFEI 352 Query: 357 SQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 + G + FK+ TP +YR Sbjct: 353 AMDLGLNDTRNIARQFKQIKGCTPLKYR 380 >UniRef50_Q7UHJ2 Xylose operon regulatory protein n=1 Tax=Rhodopirellula baltica RepID=Q7UHJ2_RHOBA Length = 403 Score = 346 bits (889), Expect = 6e-94, Method: Composition-based stats. Identities = 106/390 (27%), Positives = 198/390 (50%), Gaps = 17/390 (4%) Query: 8 ITLLFNANKAYDRQVVEGVGEYLQASQSEWDI-FIEEDFRARID-KIKDWLGDGVIADFD 65 + LL +++AY R ++ G+ Y Q Q +W + E A + W GDGV+ + Sbjct: 11 VALLIESSRAYGRGLLRGIAAYAQ-DQGDWSLRHQEMTINADPPSWLSRWQGDGVLVRAE 69 Query: 66 DKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRFAFY 125 ++ +A+ D+ +P++ + S + TD ++V A HL+++G +F F Sbjct: 70 TPKMIRAIQDLGLPVIDL----RCWRSAGKIPGFDTDPASVVRLAVDHLRDRGYTQFGFC 125 Query: 126 GLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLET-------APENWQHAQNRLADWL 178 G G ++ R R+ V + V Y+ A ++ + L WL Sbjct: 126 GF---GGANYSDRRLTEMRKYVRSLGHDVVAYESPGPVHATTFDAEQSGMLDEVGLGRWL 182 Query: 179 QTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQG 238 ++L G++A D RA+ +L C +I VP+++ V+G+DN+++ L L+SV Sbjct: 183 KSLAKPVGVLACNDIRAQQLLNACHECNIHVPDEIAVVGVDNDDVICPLCSPPLTSVEPN 242 Query: 239 ARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHA 298 +++GY+AA +L R++ E +P + VP R++ R STD + D I+A +IR +A Sbjct: 243 TQKIGYEAAAMLDRMMSGEIVPAELTWVPARRIVVRGSTDSIPVDDAEFIKAYRFIRENA 302 Query: 299 CKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQ 358 C+G+ V V DAV +SR +LE+R + + ++ +I + +L + + LL +T+ + +I++ Sbjct: 303 CRGVSVQDVADAVPMSRRSLERRMRTYLDQSPSDLIASIRLARIKELLETTSQPLKKIAR 362 Query: 359 MCGYPSLQYFYSVFKKAYDTTPKEYRDVNS 388 + G+ ++ FKK P YR + Sbjct: 363 LTGFNYDEHMAKFFKKLTGVPPGHYRRKHR 392 >UniRef50_Q64VG9 Transcriptional regulator n=8 Tax=Bacteroidales RepID=Q64VG9_BACFR Length = 391 Score = 344 bits (884), Expect = 3e-93, Method: Composition-based stats. Identities = 102/390 (26%), Positives = 186/390 (47%), Gaps = 16/390 (4%) Query: 7 RITLLFNANKAYDRQVVEGVGEYLQASQSEWDIF-------IEEDFRARIDKIKDWLGDG 59 R+ LL + +++ +++GV Y + W + + + K W D Sbjct: 3 RLILLTDFTESFSYNLLKGVLAYSKK-HEPWVVCRMPPSYKLTYGIEGVLKWAKAWQADA 61 Query: 60 VIADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGV 119 +I FD+ + + + + + I D + A KG Sbjct: 62 IIGRFDNDDNVELFRKNGIIAIAQDYKSRFS----NIPNITGDYHKTGRMAAEFFLSKGF 117 Query: 120 NRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPEN-WQHAQNRLADWL 178 FAFYG ++ W+ ER F + +AE + Y E + ++ W + L WL Sbjct: 118 RNFAFYGYRDTV---WSQERCEGFYECIAEHGFGNNFYSYQEQSLDDLWFYEAPPLLTWL 174 Query: 179 QTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQG 238 ++LP T ++A D + I ++C+ +I VP+K+ ++G+DN+E+ LS LSS++Q Sbjct: 175 KSLPQPTALMACDDNQGNRITEICKVNNIRVPDKIAILGVDNDEIICNLSDPPLSSISQN 234 Query: 239 ARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHA 298 + G++AA+L+ LL+ EE Q +++ PV ++ R STD+ S T+ + A+ YI + Sbjct: 235 IVRGGFEAAELIEHLLNDEECSYQDVVLQPVNIVNRLSTDFYSTTNTHIHTALKYIHRNL 294 Query: 299 CKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQ 358 I V ++ V +SR LE RFKE ++IH I ++E+ LL+++ I ++++ Sbjct: 295 ANDITVSDIVKQVPLSRRLLEIRFKEVTKQSIHKYILNLRIERFAQLLLASDAPIADVAE 354 Query: 359 MCGYPSLQYFYSVFKKAYDTTPKEYRDVNS 388 G +L+ FK + +P EYR + Sbjct: 355 QVGINNLKNLSRQFKTLKNVSPYEYRKEHQ 384 >UniRef50_C0A9R7 Xylose operon regulatory protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A9R7_9BACT Length = 403 Score = 344 bits (883), Expect = 3e-93, Method: Composition-based stats. Identities = 110/396 (27%), Positives = 183/396 (46%), Gaps = 18/396 (4%) Query: 8 ITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARIDKIKD-WLGDGVIADFDD 66 + LL + + R ++ G+ Y S W++ +E A + W GDGVIAD Sbjct: 12 VALLIDTACQWTRHIILGINRYKSMLASPWNLLVEPHGSADPLALPHGWQGDGVIADIRF 71 Query: 67 KQIEQALADVDVPIVGVGGS-------YHLAESYPPVHYIATDNYALVESAFLHLKEKGV 119 ++ L VP+V V S + + D A E A H E+G Sbjct: 72 PKMAAQLRKYGVPVVNVSDSTVATATKRGGGAAMQGFPQVCIDRKAACELAVEHFTERGF 131 Query: 120 NRFAFYGLPESSGKRWATEREYAFRQLVAEEKY-RGVVYQGLETA--PENWQHAQNRLAD 176 FA+ + +G W E F + Y+ A +W + L Sbjct: 132 THFAYI---DLAGNEWDRETHRYFTGALRAAGIKECASYEAQNRAWGAPDWSIDIDALGA 188 Query: 177 WLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVA 236 WL++LP + + + R ++ C + + VPE++ ++ + +E+ + V +S + Sbjct: 189 WLRSLPKPVAVFSWS--VGREVIHACRRVGLKVPEEVALLLLAYDEIFSEVGYVPISGIV 246 Query: 237 QGARQMGYQAAKLLHRLLDKEEMPL--QRILVPPVRVIERRSTDYRSLTDPAVIQAMHYI 294 ++GYQAA+ L RLL + +P R LVPPV V R+STD ++T+P + A+ YI Sbjct: 247 HAWEEIGYQAAERLGRLLAGKRIPAREWRTLVPPVGVRTRQSTDTLAITNPVITSALGYI 306 Query: 295 RNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSIN 354 R +A + + VD+V + G+SR LE+ F +G T I ++E+A+ LL T I Sbjct: 307 RENAGRPLLVDEVAEHAGVSRRKLERHFLHVMGRTPADQIRHVQVERAKVLLAETNRPIP 366 Query: 355 EISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSEV 390 E+++ G+ S +Y +VF+K TP +YR V Sbjct: 367 EVAEAAGFGSPEYMATVFQKKLGLTPLKYRKKRHAV 402 >UniRef50_B5JIB2 Transcriptional regulator, AraC family protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JIB2_9BACT Length = 394 Score = 343 bits (881), Expect = 6e-93, Method: Composition-based stats. Identities = 106/395 (26%), Positives = 191/395 (48%), Gaps = 14/395 (3%) Query: 4 KRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRAR--IDKIKDWLGDGVI 61 +R R+ L+ + ++ + ++ + ++W +F+++ R D + D DG+I Sbjct: 3 ERPRVALVLRGWLEENLNILHSLAKFKR-FNAKWHVFVDDQARGADNPDWLLDQGWDGII 61 Query: 62 ADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNR 121 ++ + + + V + +L E P + +N A+ + H EKG Sbjct: 62 CKERSGELFRKARERGIACVDMSDDGNLREGCPKMR---PNNLAIGHTGAEHFIEKGFRH 118 Query: 122 FAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETA---PENWQHAQNRLADWL 178 FA+ G + W+ ER + + + + V++ P ++ +A W+ Sbjct: 119 FAYCGF---GNELWSRERGEGYIEALTLAGKKCAVFESDYPGVSVPAWEFAEEDEMAKWI 175 Query: 179 QTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQG 238 TLP I+A D RA HI+ C VPE++ ++GI+N+ L +LSS+ Sbjct: 176 DTLPKPVAILACNDLRAMHIVNACHQGEFRVPEEVAILGINNDSARCELCSPSLSSIPVD 235 Query: 239 ARQMGYQAAKLLHRLLDKEEMP--LQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRN 296 + A + L L+ + + + P+ V+ RRST ++ DPAV QA++ IR Sbjct: 236 VTEYARVAGETLEALMKGADPADFKEVTYIDPLEVVTRRSTSILAVEDPAVAQALNLIRE 295 Query: 297 HACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEI 356 +ACKGI V+QV +V ISRS LEKRF++ VG + I ++ + + +L T LS+ E+ Sbjct: 296 NACKGITVEQVAKSVHISRSLLEKRFRQYVGRSPQVEIRHAQVMRIKQMLTETELSLAEV 355 Query: 357 SQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSEVM 391 +++ G+ +Y VFK+ TTP YR + E+ Sbjct: 356 AEITGFEHPEYMSVVFKRLTHTTPSAYRKKSKELA 390 >UniRef50_A6CDQ7 Xylose operon regulatory protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CDQ7_9PLAN Length = 388 Score = 342 bits (878), Expect = 1e-92, Method: Composition-based stats. Identities = 107/390 (27%), Positives = 192/390 (49%), Gaps = 8/390 (2%) Query: 2 FTKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIE-EDFRARIDKIKDWLGDGV 60 F +R +I LL + + RQ+++G+ +Y Q WD +IE + ++ W G G Sbjct: 3 FPERRKIALLVQTSSDWSRQIIQGIADYA-LEQGGWDFWIEFRGLQEQLRLPASWNGHGT 61 Query: 61 IADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVN 120 + D +I+Q++ +P V V L + + + +D A A KG Sbjct: 62 VCRLTDARIQQSILRRKLPAVNVSW---LGKHSAKIPKVVSDERACARLAADFFLRKGFR 118 Query: 121 RFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPEN-WQHAQNRLADWLQ 179 + G + + E E F++ + + + + E E+ +Q Q RL +WL Sbjct: 119 SCGYIGPDPTLKYQPIIENE--FQKRIVQGEGVCYQFPYYELTKEDDYQKQQKRLKEWLW 176 Query: 180 TLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGA 239 LP ++ + R + VC + H+ +P+++ ++ I+++ L LS V LS + Q Sbjct: 177 ELPKPVALLVWSSKVGREVATVCVNHHLEIPDQVAILSIEHDPLMSALSPVPLSCINQSP 236 Query: 240 RQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHAC 299 +GY+AA+LL +L+ P + IL+PP+ + ER STD D V +A+ +IR HA Sbjct: 237 HVVGYEAAQLLDQLIQGAPPPAEPILIPPLLIEERASTDTLFADDGLVREAIQFIRQHAQ 296 Query: 300 KGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQM 359 + ++V + D + +SR LE RF++ + + A I EKL++ LL T L+I++I+ Sbjct: 297 EPLQVSDLTDHLNVSRRILEHRFQKALHRSPAAEIRQEKLKRIIKLLQETKLTISQIAAR 356 Query: 360 CGYPSLQYFYSVFKKAYDTTPKEYRDVNSE 389 CG+ + +F + +P+EYR N Sbjct: 357 CGFQHQEAMIRMFGRVTGMSPREYRQQNHS 386 >UniRef50_D2R7D2 Transcriptional regulator, AraC family n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R7D2_9PLAN Length = 390 Score = 341 bits (875), Expect = 3e-92, Method: Composition-based stats. Identities = 119/389 (30%), Positives = 193/389 (49%), Gaps = 16/389 (4%) Query: 3 TKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRAR--IDKIKDWLGDGV 60 T R ++ L+ + Y R +++GV Y++++ EW +F+E+ I W GDG+ Sbjct: 9 TSRPQVALIIETSINYGRGLLKGVARYMRSA-GEWSVFLEQRELGAELPRWIDRWDGDGI 67 Query: 61 IADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVN 120 I DD ++ + +P V + + V I DN A+ A HL E+G Sbjct: 68 ITRSDDPRLLE----RGIPTVALFDHRSCQQ---KVPQILNDNRAVGRLAAAHLVERGFR 120 Query: 121 RFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPE---NWQHAQNRLADW 177 AFYG+P G+ W+ ER R+ A + V++ + + WQ +Q LA W Sbjct: 121 HLAFYGVP---GEFWSEERLAGVREEGARQGASLAVFEPARSRRKRSIAWQDSQEELARW 177 Query: 178 LQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQ 237 + G++A D L C+ I VPE++ V+G DN+E LS LSS+A Sbjct: 178 MSAQAAPLGLVAANDIHGLRALDACKRAGISVPERVAVMGADNDEELCELSDPPLSSIAF 237 Query: 238 GARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNH 297 + G+ AA++L R++ E + LVPP+ ++ R+STD ++ D V +A+ IR Sbjct: 238 QPLRAGFAAAEMLARMMRGERVQSAMQLVPPLGLVTRQSTDVLAMEDEEVARALAVIRQQ 297 Query: 298 ACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEIS 357 AC G+ V +L V ISR +LE R ++ +G T I ++E+A+ LL T L ++ I+ Sbjct: 298 ACDGLDVPAILRQVPISRRSLEIRMQKLLGRTPREEIRRVQIERAKKLLSETDLKLDRIA 357 Query: 358 QMCGYPSLQYFYSVFKKAYDTTPKEYRDV 386 CG+ F++ TTP +YR Sbjct: 358 VSCGFVRASALSIAFREVVGTTPSDYRSQ 386 >UniRef50_Q7UXA9 Xylose operon regulatory protein n=1 Tax=Rhodopirellula baltica RepID=Q7UXA9_RHOBA Length = 438 Score = 340 bits (872), Expect = 6e-92, Method: Composition-based stats. Identities = 125/395 (31%), Positives = 195/395 (49%), Gaps = 18/395 (4%) Query: 4 KRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRAR--IDKIKDWLGDGVI 61 R RI LL ++AY R+++ G+ Y + ++ +W + EE D I DGVI Sbjct: 38 NRPRIALLVEVSRAYGRELLRGIALYAR-TKGDWSLLHEEMTIDSVVPDWISRTRVDGVI 96 Query: 62 ADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNR 121 A D I L + VPIV V G+ +P V + DN + E AF HL E+G R Sbjct: 97 ARLDHHSI-DPLRRLRVPIVDVRGN----RKFPGVPQVEADNEQVAEMAFEHLWERGFRR 151 Query: 122 FAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQG-------LETAPENWQHAQNRL 174 FAF G ++ R AFR+LV + +Q L Q L Sbjct: 152 FAFCGF---RFATYSDARLIAFRKLVEKAGCPFTEHQSPGAPGITLRELERAGVVEQEAL 208 Query: 175 ADWLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSS 234 +WL TL TG+ D R + +L C +I VP+ + VIG+D+++ + +LSS Sbjct: 209 VEWLSTLERPTGLFVCNDIRGQQVLNACRFANIAVPDDVGVIGVDDDDTICSICDPSLSS 268 Query: 235 VAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYI 294 V A GY+AA++L ++L+ + +PP+ V ER ST ++ D + + +I Sbjct: 269 VRPNAELAGYRAAEILQQMLNGWVPDKEVERIPPISVTERLSTKVVAVEDAELARVCRFI 328 Query: 295 RNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSIN 354 R +AC GI V V++ +SR LE+RF++ +G T H I +LE+ R LL T +++ Sbjct: 329 RQNACNGINVGDVVEFTSLSRRQLERRFRDVLGHTPHHQITMTQLERVRQLLTETDMTLE 388 Query: 355 EISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSE 389 +I+ + GY + +VFK+ +P EYR + Sbjct: 389 QIAPLAGYSHKESLGAVFKRETGQSPGEYRTEQQK 423 >UniRef50_D1W5K7 Transcriptional regulator, AraC family n=1 Tax=Prevotella buccalis ATCC 35310 RepID=D1W5K7_9BACT Length = 387 Score = 334 bits (858), Expect = 2e-90, Method: Composition-based stats. Identities = 108/389 (27%), Positives = 176/389 (45%), Gaps = 15/389 (3%) Query: 7 RITLLFNANKAYDRQVVEGVGEYLQASQSEWDIF-------IEEDFRARIDKIKDWLGDG 59 R+ LL + + Y +++ G+ +Y Q S W I +E + + W D Sbjct: 3 RLILLIDFTETYATELLRGILDYSQ-SHEPWVICRMPPSYRVEHGIEGVLQWARQWKADA 61 Query: 60 VIADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGV 119 +I F+ A+ + + + + + + I D A +KG Sbjct: 62 IIGQFNSNDDVSVFAEYGI----IALAQDFIQRFQNIPNITGDYIGQGNLAAEFFIKKGF 117 Query: 120 NRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQ 179 FAFYG + W+ ER F + Y ++ W + L +WL Sbjct: 118 RNFAFYGY---ANAVWSQERCKGFSDTIKSFGYHSPSIYIKQSLEYLWYYDLEPLVEWLS 174 Query: 180 TLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGA 239 LP T I+A D RA IL+VC L I VP ++ V+G+DN+E+T L+ LSS++ Sbjct: 175 KLPSSTAILACDDTRASVILEVCRLLRIKVPSEIAVLGVDNDEITCTLTHPLLSSISLDV 234 Query: 240 RQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHAC 299 R+ GY +A+ + +L+ + I+V + V+ERRSTD ++ ++ + +I Sbjct: 235 RRAGYNSAQYIDHVLNHNYKRVDNIMVDYMGVVERRSTDIFMTSNKHILTVLSFIHQFYA 294 Query: 300 KGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQM 359 + VD++L V +SR LEK FK E G +IH I + E + L+ST I E++ Sbjct: 295 DNLSVDRLLKLVPMSRRLLEKTFKAETGTSIHQYILDLRFEHMKHKLVSTDTPIAELALS 354 Query: 360 CGYPSLQYFYSVFKKAYDTTPKEYRDVNS 388 G + +FKK TP EYRD + Sbjct: 355 TGLSDAKNVARMFKKRMGITPLEYRDKHR 383 >UniRef50_C6W1V7 Transcriptional regulator, AraC family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W1V7_DYAFD Length = 386 Score = 333 bits (855), Expect = 5e-90, Method: Composition-based stats. Identities = 104/392 (26%), Positives = 187/392 (47%), Gaps = 19/392 (4%) Query: 5 RHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRAR--------IDKIKDWL 56 ++I LL + + Y + +++G+ Y W IF R + +W Sbjct: 1 MYKIILLLDFAEEYSKSLMKGINAYS-KEFGPW-IFCRMPLFHRETIGIDGILKWALEWG 58 Query: 57 GDGVIADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKE 116 DG++ +K+I++ L +P++ E + + I + + + + Sbjct: 59 ADGIVGQLYNKEIDKILRA-GIPVIA----QDFKERFTEIPNITGAYHEAGQMGADYFLK 113 Query: 117 KGVNRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAP-ENWQHAQNRLA 175 KG FAFYG + W+ ER F + + ++ ++ ++ ++ E W + + L+ Sbjct: 114 KGFTNFAFYGF---NDIVWSRERAEGFEEHLRKKGHKVHYFEHKKSRSTELWYYKPSSLS 170 Query: 176 DWLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSV 235 WL++LP G++ D + +HI + C H+ I +PE++ V+G+DN+E+ LS LSS+ Sbjct: 171 RWLKSLPKPIGLMTCDDNQGQHITEACRHVGIRIPEEVAVLGVDNDEMICDLSDPPLSSI 230 Query: 236 AQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIR 295 A + GY AAKLL ++ ++V P +VI R STD + D + ++ YI Sbjct: 231 ALDVEKGGYDAAKLLDHMIRHGTAGFYDVVVRPTQVITRHSTDIYATNDDHIASSLKYIH 290 Query: 296 NHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINE 355 + K + VD+V+ V +SR LEKRF E G I+ I ++EK L+ T +S+ E Sbjct: 291 QNIEKNLHVDEVVKQVPLSRRALEKRFLEITGYPIYKYIFNLRIEKFTQKLLDTDMSVFE 350 Query: 356 ISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVN 387 I+ G + F++A +P YR Sbjct: 351 IALDMGLGDSKNIARQFRQAKGCSPSAYRSKY 382 >UniRef50_C1ZL78 Transcriptional regulator n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZL78_PLALI Length = 380 Score = 333 bits (854), Expect = 6e-90, Method: Composition-based stats. Identities = 106/385 (27%), Positives = 185/385 (48%), Gaps = 9/385 (2%) Query: 1 MFTKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFI-EEDFRARIDKIKDWLGDG 59 M + +L ++ R VVE V Y Q S+ W + I D R+ W GDG Sbjct: 1 MPNYSRSVAVLIETGDSWGRNVVEAVARYAQKSR--WALVISPRDEDGRLRLPHRWQGDG 58 Query: 60 VIADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGV 119 +A D + ++L +P+V V L V + TD+ + AF H + K Sbjct: 59 AVAMLRDVPMARSLQTAAIPVVDVDV---LMRQETWVGRVVTDDRVRIAMAFEHFRSKNF 115 Query: 120 NRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQ 179 FA + R+ +R F+Q+ + + + LE W +A W++ Sbjct: 116 THFACFAP---HVNRYPDQRSQLFQQVARKAGFYCCGFDKLERNELGWYADPQLVAQWIR 172 Query: 180 TLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGA 239 + P + A AR + ++C+ I +P+++ ++ D ++L ++ +SSV Sbjct: 173 SQPSPLAVFAPDPVPARQLAEICQWEGIHIPDEVAILSGDTDDLLCSIASPPISSVELDC 232 Query: 240 RQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHAC 299 ++G++A LLHR+++ P L+PP+RVI R ST+ ++ D + + +IR+HAC Sbjct: 233 ARIGHEACALLHRMMNGRPAPKHPKLIPPLRVIARHSTEILAVADQEIGDVLRFIRSHAC 292 Query: 300 KGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQM 359 +GI+V +L ISR LE++F+ +G T I +LE+AR+LL+ + L I+ ++ Sbjct: 293 EGIRVPDILKVYPISRRTLEQKFQTILGRTPSEEIRRTRLEQARNLLVDSDLPISSVATK 352 Query: 360 CGYPSLQYFYSVFKKAYDTTPKEYR 384 CG+ S F F+K P + R Sbjct: 353 CGFSSSVEFSHAFRKYLGIKPSDLR 377 >UniRef50_B1ZWW6 Transcriptional regulator, AraC family n=4 Tax=Opitutus terrae PB90-1 RepID=B1ZWW6_OPITP Length = 445 Score = 333 bits (854), Expect = 8e-90, Method: Composition-based stats. Identities = 112/391 (28%), Positives = 199/391 (50%), Gaps = 13/391 (3%) Query: 3 TKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARID--KIKDWLGDGV 60 + + L+F ++ GV Y +AS S W +++++ RA ID ++ GV Sbjct: 57 ESKPHVLLVFKTRYEDAAGMLRGVTHYERASNS-WVAYLDDEGRAEIDPRWVRSKRWCGV 115 Query: 61 IADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVN 120 I+ + + +++ +P+V + A P V I DN AL + + E+G Sbjct: 116 ISRHTTPTLARTCSELGIPLVDLSD----APPMPHVSKIRADNAALGQMGAEYFLERGYR 171 Query: 121 RFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAP--ENWQHAQ-NRLADW 177 FAF G + W+ ER F + + + +++ + W+ A+ + L W Sbjct: 172 HFAFCGYRDLG---WSQERRTGFVEALGLAGHPCELFEVERPSDLAPFWEGAEADALTLW 228 Query: 178 LQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQ 237 ++ LPP+ ++A +D A +++ E + VPE++ V+G +N+ + L+ +SSVA Sbjct: 229 VRGLPPRVAVMACSDLCAFQVMRAAEAAGVLVPEQMGVLGANNDPMRCELANPPISSVAA 288 Query: 238 GARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNH 297 + Q GYQAA+ L L+ + + + P+ V+ R+STD +++D V A+ YIR H Sbjct: 289 NSFQAGYQAAQHLDELMAGRASGVIDVRIEPLGVVTRKSTDVVAVSDAVVSHALSYIREH 348 Query: 298 ACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEIS 357 ACKG+ VD VL V +SRS LE RF+ VG + A I ++ + LL+ T L + EI+ Sbjct: 349 ACKGVSVDDVLRQVLVSRSKLESRFRRHVGRSPQAEIRRVQVMRIIQLLLETDLPLAEIA 408 Query: 358 QMCGYPSLQYFYSVFKKAYDTTPKEYRDVNS 388 ++ G+ ++Y +FK+ +P YR + Sbjct: 409 ELTGFVHVEYMCVLFKRFTGESPGRYRRKHR 439 >UniRef50_A6DIY5 Xylose operon regulatory protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DIY5_9BACT Length = 386 Score = 328 bits (841), Expect = 2e-88, Method: Composition-based stats. Identities = 109/385 (28%), Positives = 191/385 (49%), Gaps = 12/385 (3%) Query: 4 KRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEED-FRARIDKIKDWLGDGVIA 62 R+ L F + +V+ G+ + A+ W + R I +K+W GDG+IA Sbjct: 10 SMKRVALAFPIGVDHLTEVLYGIRNHPCAAN--WQFLTNPERHRLEIRDLKNWDGDGIIA 67 Query: 63 DFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRF 122 + ++ + + + +P + + G + PV + D + + A +KG F Sbjct: 68 QINSQEEAELIQSLGIPCINISGVLKKS----PVPRVCADYEEIGKKAAEFFLKKGFRNF 123 Query: 123 AFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQTLP 182 A+YG+ + ++ E FR LVA+ Y +Y+ WQ + + L +L+TL Sbjct: 124 AYYGIKKVW---YSAEVYRGFRNLVADHGYEVDLYEAHSGVSTEWQQSNDGLESFLRTLA 180 Query: 183 PQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQM 242 P+T ++A D RA +LQ C + I VPE++ V+G +N+++ L+ LSSVA+ R++ Sbjct: 181 PKTALLAAHDPRAVEVLQTCARIGIKVPEQISVMGENNDKVNCELATPTLSSVARQGRKL 240 Query: 243 GYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGI 302 G++ A+LLH ++ E + + +P + ER ST S+ +P + + + +IR + + I Sbjct: 241 GHKVAELLHSFMNGESVAGDHV-IPCGEIFERDSTAVLSIYNPEIAKVVEFIRLNVLQQI 299 Query: 303 KVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLL-ISTTLSINEISQMCG 361 V+ +G SR LE FKEE+ +T I + + EKA+ LL + +L I E + G Sbjct: 300 NVESAASHIGRSRRWLEYHFKEELQQTPLEFISSVRAEKAKELLELDASLRITEAAYKLG 359 Query: 362 YPSLQYFYSVFKKAYDTTPKEYRDV 386 + S KK Y + KE R Sbjct: 360 FSSTNQLNKYLKKFYGMSAKEIRQK 384 >UniRef50_C3QXL3 Transcriptional regulator n=7 Tax=Bacteroides RepID=C3QXL3_9BACE Length = 381 Score = 327 bits (839), Expect = 4e-88, Method: Composition-based stats. Identities = 87/390 (22%), Positives = 180/390 (46%), Gaps = 20/390 (5%) Query: 7 RITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARID-------KIKDWLGDG 59 +I LL + + +DR+++ G+ +Y W + + + + K+W D Sbjct: 3 KILLLIDYSSEFDRKLLRGLVQYS-KENGPWLFYRLPSYYSTMHGEQGILKWAKEWKADA 61 Query: 60 VIADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGV 119 +I +++ ++++P+V + +H + +Y + D A ++ Sbjct: 62 IIGQWNN-DTIDLQKELNIPVV-LQNYHHRSVTY---SNLTGDYKGTGRMAAQFFAKRMF 116 Query: 120 NRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQ 179 FA++G+ G W+ ER +RQ V ++ + + + WLQ Sbjct: 117 RNFAYFGVK---GVVWSDERCEGYRQEVKRIGGEFFSFES----DKQEDEIRMEASQWLQ 169 Query: 180 TLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGA 239 LP + DA A I + C+ +IP+PE++ ++G+DN+EL +S +SS+ Sbjct: 170 QLPKPVALFCCDDAHALFISETCKMTNIPIPEEIALLGVDNDELMCNISDPPISSIELEV 229 Query: 240 RQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHAC 299 + GY +L+H+ + KE I++ P+R+ R+ST+ ++ DP +++ + YI +H Sbjct: 230 ERGGYSIGRLIHQQIKKEHEGTFNIVINPIRIELRQSTEKHNIKDPYILEVVKYIESHYS 289 Query: 300 KGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQM 359 + ++ +L + +SR N E +FK + +I+ I + LL++T + +++ Sbjct: 290 SDLTIESLLANIPLSRRNFEVKFKNALNTSIYQYILNCRCNHLADLLLTTDRPLADLAME 349 Query: 360 CGYPSLQYFYSVFKKAYDTTPKEYRDVNSE 389 G+ +FKK +P EYR + Sbjct: 350 VGFTDYNNIARIFKKFKGCSPIEYRQKKTR 379 >UniRef50_UPI000174642C xylose operon regulatory protein n=3 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI000174642C Length = 417 Score = 324 bits (831), Expect = 3e-87, Method: Composition-based stats. Identities = 114/386 (29%), Positives = 186/386 (48%), Gaps = 11/386 (2%) Query: 3 TKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFI--EEDFRARIDKIKDWLGDGV 60 ++ +L + +Y R ++ G+G Y + S+ W ++I F ++ W G G+ Sbjct: 9 PGSQQVAVLIDDAGSYSRDLLIGIGRYQRESKKPWALYIIHRRRFEMPPPSLRSWRGQGI 68 Query: 61 IADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVN 120 IA D +++E L + +P+V + G A P ++ D A ++G Sbjct: 69 IARVDTQEVEAELKSLSLPVVNISG----ALKEPFFPTLSQDPLLAAHLALKCFDDRGFR 124 Query: 121 RFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQT 180 AF G S ++W+ ER FR+L+ R L A +A WL++ Sbjct: 125 HHAFVG---DSLQQWSLERWEEFRRLLGARGERCGNL-LLNPGESGAGRAVQIIAKWLES 180 Query: 181 LPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGAR 240 P GI A D +L C +I VPE + V+G+DN+ L+ LSS+ Sbjct: 181 QPRPLGIWAGDDGMGLQVLNACLVSNIRVPEDVAVLGVDNDASIAELASPPLSSIILNGE 240 Query: 241 QMGYQAAKLLHRLLDKEEMPLQRIL-VPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHAC 299 GY+AA+LL R + E +I + P V RRSTD ++ DP V +A+ I+ AC Sbjct: 241 GAGYRAAQLLDRWMGGEPAVTGKIYQLAPAGVAWRRSTDVFAVEDPYVAKALRMIQQEAC 300 Query: 300 KGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQM 359 G++V +V+ V ++R LE RFK V T+ A I + +A+ LL +T + + ++++ Sbjct: 301 AGLRVAEVVGRVPLARRQLEMRFKAAVRRTLLAEIWRVQCRRAQELLETTDIPMVDVAEQ 360 Query: 360 CGYPSLQYFYSVFKKAYDTTPKEYRD 385 CGY L++F VFKK P E+R Sbjct: 361 CGYEHLEHFSKVFKKVVGHPPGEHRR 386 >UniRef50_A6C7I7 Xylose operon regulatory protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C7I7_9PLAN Length = 374 Score = 321 bits (824), Expect = 2e-86, Method: Composition-based stats. Identities = 106/377 (28%), Positives = 192/377 (50%), Gaps = 9/377 (2%) Query: 10 LLFNANKAYDRQVVEGVGEYLQASQSEWDIFI-EEDFRARIDKIKDWLGDGVIADFDDKQ 68 +L + + + R V++G+ ++ + W ++I D + R+ ++W GDG+IA D + Sbjct: 1 MLIDPDDTWGRSVIQGIASAVR-NVLPWSLWIAPRDQQWRLRVPRNWQGDGIIAAIRDDK 59 Query: 69 IEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRFAFYGLP 128 ++ +D+P V V + YP + + T++ E AF H +E+ + FA+YG P Sbjct: 60 TADHVSGLDLPTVNVSS---WEKDYPDCYRVKTNDTRRAEMAFSHFRERSFSHFAYYGPP 116 Query: 129 ESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQTLPPQTGII 188 +R++ R F+ +V + ++ T E Q R WLQ P I Sbjct: 117 S---QRYSQSRGDYFQDVVQAAGFVCDTFRSRTTTREK-SSIQERTLRWLQQAPRPLAIF 172 Query: 189 AVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAK 248 A + +VC + VPE++ ++ D ++L +S LSS+ + Q+G + + Sbjct: 173 AADPHSGVLLTEVCSAVGFRVPEEIAILVGDTDDLLCNISAPPLSSIVLASEQIGMTSVR 232 Query: 249 LLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVL 308 +L LL +++ + +PP+ VIER+S++ ++ DP ++ A+ +IR A GI+V VL Sbjct: 233 ILESLLKGKKVKSKVHALPPLHVIERQSSEMLAIDDPLLVDALRFIRVRAHTGIQVSDVL 292 Query: 309 DAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYF 368 V ISR +LE+RF++ + T I K+E+ + LLIST ++ +I+ G+ S Sbjct: 293 QTVPISRRSLEQRFRQLLNCTPADEIRRIKIERVKQLLISTDKTVEQIAASSGFCSPGQL 352 Query: 369 YSVFKKAYDTTPKEYRD 385 F+K TP E+R Sbjct: 353 CFAFRKQIGQTPIEFRR 369 >UniRef50_A3ZWJ4 Xylose operon regulatory protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZWJ4_9PLAN Length = 400 Score = 321 bits (822), Expect = 4e-86, Method: Composition-based stats. Identities = 103/387 (26%), Positives = 175/387 (45%), Gaps = 8/387 (2%) Query: 1 MFTKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIE-EDFRARIDKIKDWLGDG 59 ++ R RI LL + R ++EGV + A WD ++ + + DW G+G Sbjct: 7 VYPDRLRIALLVLNESQWSRSILEGVSRFA-AEHGGWDFWLHPRAMKTQALMPADWKGEG 65 Query: 60 VIADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGV 119 +IA D+ + +L D+P + V + +P + D E A ++G Sbjct: 66 IIARIADEHVRASLERHDMPTINVSWHSEQSRRFPK---VIADPQGSGELAGNFFVQRGF 122 Query: 120 NRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPE-NWQHAQNRLADWL 178 F + G P R + A +++ E Y + +P ++ + ++RL W+ Sbjct: 123 QHFGYIGPPLCYNYRDPVQ--PAAERVIEEAGYSLRSFSPDPASPSSDYDYQRSRLVQWV 180 Query: 179 QTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQG 238 ++LP G+IA + AR I+ C I VP + V+ ++++ L LS + +S + Q Sbjct: 181 RSLPKPIGVIAFSTVVAREIMLTCSAEGINVPNDVAVLAVEHDPLISQLSPMPISYIQQR 240 Query: 239 ARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHA 298 +GY+AA+ L RL+ + I + P +IE+ STD D V A+ YI+ +A Sbjct: 241 PELVGYEAARELRRLISGGTPRDEPIAIAPEGIIEKPSTDTIFAADSMVQNAVAYIKQNA 300 Query: 299 CKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQ 358 I V + + +SR +LE RF++ + T I +L + L T LS+ EIS Sbjct: 301 DSAINVSDLTRFLDVSRRSLEDRFRKALNRTPAEEIRFARLLVLKDFLRQTNLSLAEISA 360 Query: 359 MCGYPSLQYFYSVFKKAYDTTPKEYRD 385 G+ FK+ TP EYR Sbjct: 361 KSGFSCENSTLRFFKRMTGMTPGEYRR 387 >UniRef50_C0A1Z9 Xylose operon regulatory protein n=2 Tax=Opitutaceae bacterium TAV2 RepID=C0A1Z9_9BACT Length = 413 Score = 317 bits (813), Expect = 4e-85, Method: Composition-based stats. Identities = 99/399 (24%), Positives = 187/399 (46%), Gaps = 28/399 (7%) Query: 7 RITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDF-RARIDKIKDWLGDGVIADFD 65 R+ LL + + R +++G+ YL+ + W IF+E I W+G+GVIA+ Sbjct: 20 RVALLVETSTTWARSILDGINNYLRKGHN-WQIFLEPHGSNESIRMPAGWVGEGVIAEIK 78 Query: 66 DKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRFAFY 125 D + + A +++P+V + ++P + +D A A + E+G FA+ Sbjct: 79 DLGMARHFASLNIPVVNLSQVTFRDIAFP---TVTSDIAACARMAGRYYFERGYQNFAYL 135 Query: 126 GLPESSGKRWATEREYAFRQLVAEEK--YRGVVYQGLETAPENWQHAQNRLADWLQTLPP 183 L ++ + F + V + + + + +W + LADWL LP Sbjct: 136 RLERNALDA---QHSANFGEFVTQAGGSFFSLGVKNRAWGVADWNMSIKALADWLAGLPK 192 Query: 184 QTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMG 243 GI + A R ++Q C + +PE++ ++ + ++E+ +S + +S + Q+G Sbjct: 193 PVGIFSW--AIGREVVQACHLAGLRMPEEVALVMLSDDEIFLEMSHIPISGIMHPGEQIG 250 Query: 244 YQAAKLLHRLLDKEEM----------------PLQRILVPPVRVIERRSTDYRSLTDPAV 287 ++AA++L L+ + P L+ P+ V R+S+D ++TDPA+ Sbjct: 251 HEAAQMLDELMTAAKSKKHAATFSGKSQPAASPPPVRLIQPLGVKTRQSSDVLAITDPAL 310 Query: 288 IQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLI 347 A+ YIR + ++VD V GISR +LE++F + + + I L +A+ LL Sbjct: 311 RTAISYIRQRVGEPLQVDDVARQAGISRRSLEQKFAKTLERSPADYIRDAHLARAKDLLR 370 Query: 348 STTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDV 386 TTL I +++ G+ S +Y +F+ +P YR Sbjct: 371 ETTLPIPQVADAAGFSSPEYMAQLFRAKLGESPLRYRKK 409 >UniRef50_A3ZSV8 Xylose operon regulatory protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZSV8_9PLAN Length = 380 Score = 317 bits (812), Expect = 5e-85, Method: Composition-based stats. Identities = 92/383 (24%), Positives = 174/383 (45%), Gaps = 7/383 (1%) Query: 8 ITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFR-ARIDKIKDWLGDGVIADFDD 66 + +L + + +V G+ YL W++F+E + + K W GDG+IA ++ Sbjct: 1 MGVLIETSTGWGNGMVSGIASYLDDCGESWNVFLEPRGKFEPLHIPKGWNGDGIIARVNN 60 Query: 67 KQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRFAFYG 126 ++ + + +P V V + D A + K + FA+ G Sbjct: 61 AELAEEILKAGIPCVNVSW---YDYGEGTIARCTLDEEESGRLAAKYYLNKKYSYFAYCG 117 Query: 127 LPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPE-NWQHAQNRLADWLQTLPPQT 185 P R A+ Q + Y Y + W +L WL LP Sbjct: 118 SPWRPDYEDLFGR--AYSQYLQTAGYTCHTYPAPGIDRQQPWIDQLRQLGTWLTKLPKPC 175 Query: 186 GIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQ 245 G++A+ +R ++ + + VPE + V+ +++EL ++R LS + A +GY Sbjct: 176 GVLAIDTQTSRQLIDAAKFAELGVPETIAVLAGEHDELASGITRPKLSMLDNAAHSVGYN 235 Query: 246 AAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVD 305 AA+LL R++ E + + + P VI ++STD+ L+D +++A+ ++R++ I+V Sbjct: 236 AAQLLDRIMRGEANRGELVTIKPTNVISKKSTDWTVLSDERLMRALRFVRDNFHHPIQVA 295 Query: 306 QVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSL 365 + + GISR LE+ F + T I +L++A+ LL + L+++EI+ CG+ S Sbjct: 296 DLAEQAGISRRLLEQLFDRHLEITPSKQILLVRLDEAKHLLDRSVLAMSEIASRCGFDSP 355 Query: 366 QYFYSVFKKAYDTTPKEYRDVNS 388 + F++ +P +YR Sbjct: 356 EVMCRAFQRELQLSPTKYRQTRR 378 >UniRef50_B1ZT55 Transcriptional regulator, AraC family n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZT55_OPITP Length = 411 Score = 313 bits (801), Expect = 1e-83, Method: Composition-based stats. Identities = 101/373 (27%), Positives = 176/373 (47%), Gaps = 20/373 (5%) Query: 21 QVVEGVGEYLQASQSEWDIFIEEDFRARIDKIKDWLGDGVIA-DFDDKQIEQALADVDVP 79 + + G+ + +A +W + ++ F + + W G GV+A ++ L +P Sbjct: 22 ECIRGITRHARAH--DWHLVMDMLFTGALP--RGWNGSGVLALGAHQPELLAHLQASGLP 77 Query: 80 IVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRFAFYGLPESSGKRWATER 139 V + + + + D+ A+ A H E+ FA+ + R ER Sbjct: 78 CVVLTD----GDPIVDLPRVEPDHRAIGRLAADHFLERAHRSFAWAPFLNDAANR---ER 130 Query: 140 EYAFRQLVAEEKYRGVVYQGLETA-----PENWQHAQNRLADWLQTLPPQTGIIAVTDAR 194 F++ +AE + T +NW + LA L LP T I A D Sbjct: 131 LAGFQERLAEHGRTCRLLPPAHTRIGPYWQDNWDDYRRNLAAELLRLPRPTAIFAFNDCT 190 Query: 195 ARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLL 254 A +++ C+ + VPE + V+G+ N L LS V LSSV ++GY+AA LL +L Sbjct: 191 AANVIDCCQDAALAVPEDVAVLGVGNS-LVCELSPVPLSSVDDDMTELGYRAALLLESVL 249 Query: 255 DKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKG-IKVDQVLDAVGI 313 + + +PP ++ R S+D ++TDP V +A+HYI H + V QV +A+G+ Sbjct: 250 SGAGTATRTLRIPPRGIVTRLSSDMAAVTDPRVARALHYIAEHYSNPMLTVCQVAEALGM 309 Query: 314 SRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLI-STTLSINEISQMCGYPSLQYFYSVF 372 SR NLE+ F++E G TIH I A ++ +A LL + ++++ + G + F F Sbjct: 310 SRRNLERSFRDETGCTIHENIIAVRMREASRLLRMHPSTKTSDVAGLVGISGVGTFCRTF 369 Query: 373 KKAYDTTPKEYRD 385 ++ + +P+ +RD Sbjct: 370 RRHFGMSPQAHRD 382 >UniRef50_A3ZVD0 Xylose operon regulatory protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZVD0_9PLAN Length = 416 Score = 309 bits (793), Expect = 8e-83, Method: Composition-based stats. Identities = 108/385 (28%), Positives = 179/385 (46%), Gaps = 11/385 (2%) Query: 6 HRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARIDKIKDWLGDGVIADFD 65 H+ITL + +++ GV +Y + I+ + DG+IA + Sbjct: 37 HKITLAVVPSSDNQVRMIRGVMQYATETGRIQITKRAAIPYVPIELLDKLAADGIIAYAE 96 Query: 66 DKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRFAFY 125 ++ L + +P V + +E V + +DN + HL G+ FAF Sbjct: 97 SQERINFLQSLGIPFVNLTLQ---SEPEAGVPVVHSDNLQIGRRLAEHLLSLGLRNFAFV 153 Query: 126 GLPESSGKRWATEREYAFRQLVAEEKYRGVVYQ-----GLETAPENWQHAQNRLADWLQT 180 G R R+ F Q +AE + L + Q Q L + Sbjct: 154 GHFAWYHNRM---RQTGFLQRLAESGFDAASIDISFDSELSLETSDRQVHQGELQQAIAG 210 Query: 181 LPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGAR 240 LP G+ + D A I++ C+ + +P + VIG+++ L + LSSVAQ + Sbjct: 211 LPEPCGVASCHDEFAHEIVEACKVIGRSIPHSVSVIGVNDYRLICETTMPGLSSVAQNSE 270 Query: 241 QMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACK 300 ++GY AA+L+ +L++ E P + ILVPP ++I RRS+ + +L D V+ A+ +IR+ + Sbjct: 271 RIGYLAAQLVDQLIEGAERPAKPILVPPGQLIVRRSSQFLALGDANVVAAVEFIRDRCHR 330 Query: 301 GIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMC 360 I V V+D + +SR LEKRFK +G +I I ++ A+ LL ST LSI +++ Sbjct: 331 PITVTDVVDHLHLSRKVLEKRFKTAIGHSIAHEIRLSRMRNAQHLLTSTPLSIVDVAVRS 390 Query: 361 GYPSLQYFYSVFKKAYDTTPKEYRD 385 G+ S F F++ TP YR Sbjct: 391 GFDSTSGFIRAFREHTGVTPANYRK 415 >UniRef50_C0A646 Xylose operon regulatory protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A646_9BACT Length = 393 Score = 308 bits (790), Expect = 2e-82, Method: Composition-based stats. Identities = 109/391 (27%), Positives = 174/391 (44%), Gaps = 18/391 (4%) Query: 4 KRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARIDKIKDWLGDGVIAD 63 + R ++L Y V G+ + + ++ W + + + W DG+I+ Sbjct: 14 SQKRTSILLALAW-YSPAVHRGIIRHAR--EAGWIL--DAAVERYKNHFPLWREDGIISY 68 Query: 64 FD-DKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRF 122 D + + + D P+V +G P V + D + A + E+G Sbjct: 69 LHADSALYEFIKKTDKPVVNIGNGKQ-----PGVPTVKPDVRKIGVMAADYFFERGFRDM 123 Query: 123 AFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWL---- 178 AF+ + R ER AFR E R + L + Q+++ L +WL Sbjct: 124 AFFLKSHAPAAR---ERWRAFRARAEELGARAHLMNWLRHSGGRVQYSEAALVEWLGESV 180 Query: 179 QTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQG 238 LP I+A D A ++ C IP+PE++ V+G++N+ L + V LSS+ Sbjct: 181 TALPKPLAIMAEHDEHAIEVIHACIQFSIPIPEQVAVLGVNNDPLRCEFAPVPLSSIDSN 240 Query: 239 ARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHA 298 MGY+AA LL R+L E P + +L+PP V+ R STD ++ P V +H+I + Sbjct: 241 HEVMGYEAAVLLDRILHGETPPAEPVLIPPAGVVTRLSTDMMAIKHPHVATVLHHIWQNY 300 Query: 299 CKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQ 358 + I V V +S L F + VG TI I +++EKAR LL T +I+ Sbjct: 301 TRAINAKTVAALVPLSYQRLHAAFLKNVGRTIANEITHKRMEKARELLAGTAKKAYDIAL 360 Query: 359 MCGYPSLQYFYSVFKKAYDTTPKEYRDVNSE 389 CG+P+ VFK+ TP EYR N + Sbjct: 361 ECGFPNDDRMGRVFKRVLGVTPMEYRQQNRK 391 >UniRef50_B4D2S2 Transcriptional regulator, AraC family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D2S2_9BACT Length = 385 Score = 307 bits (786), Expect = 6e-82, Method: Composition-based stats. Identities = 110/392 (28%), Positives = 181/392 (46%), Gaps = 13/392 (3%) Query: 1 MFTKR--HRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFR--ARIDKIKDWL 56 M T+R R+ LL + Y R+++ GV Y+ A+ W F+E + ++DW Sbjct: 1 MPTRRRTPRVALLIETTRTYTRELLAGVRRYI-AAHGPWSTFLELRALDSSPPAWLRDWD 59 Query: 57 GDGVIADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKE 116 GDG++ Q+ + + +P + + Y+ DN + S H E Sbjct: 60 GDGILTRTFTPQMGRLIEATGLPAIEL----RTTNFGGSRPYVGMDNRLIGASVAEHFLE 115 Query: 117 KGVNRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRG-VVYQGLETAPENWQHAQNRLA 175 +G +FA Y L S + ER F V R + + + ++W+ +Q RL Sbjct: 116 RGYRQFAAYSLHTES---FFVERIRNFVTTVEALGARCSRLPETTSDSAKDWEKSQARLV 172 Query: 176 DWLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSV 235 WLQ LP GI A D +L+ C+ + VPE++ V+G +NEE + L+SV Sbjct: 173 AWLQELPKPVGIFAANDQLGVRLLEACQRAGVAVPEEVAVVGAENEETLCSFATPPLTSV 232 Query: 236 AQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIR 295 + +GY AA++L +L+ + +L+PP ++ R S+D + DP V A IR Sbjct: 233 RYDGQAVGYAAAEMLDQLMRGRRLRRSAVLIPPKGIVVRHSSDSLVINDPFVAHAARLIR 292 Query: 296 NHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINE 355 A G+ VDQ+ + SRS L++R K + T I + + LL T L+I+ Sbjct: 293 EEALHGLNVDQLCHKLNASRSTLDRRMKAALQRTPKEEILRVRFREVERLLRETDLTIDT 352 Query: 356 ISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVN 387 I+ G+ Y + FK+ + TP +R V Sbjct: 353 IAAQTGFAHSHYLQAAFKETHGVTPGAWRRVQ 384 >UniRef50_A3ZWC2 Xylose operon regulatory protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZWC2_9PLAN Length = 389 Score = 299 bits (766), Expect = 1e-79, Method: Composition-based stats. Identities = 109/396 (27%), Positives = 176/396 (44%), Gaps = 26/396 (6%) Query: 3 TKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARIDKIKDWLGDGVIA 62 +R +L Y ++ GV + + W + + D +DW GDGVI Sbjct: 12 PQRSATHVLLALGWYYS-EIHRGVARFARDHH--WHVTFDFDDL----VPRDWQGDGVIT 64 Query: 63 DF-DDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNR 121 +QI ++L DVP+V + S P+ + DN A+ + A H ++G Sbjct: 65 LLGAQQQIWRSLQQFDVPMVDLSES----RPDVPLPRVTMDNVAIGQMAAQHFLDRGFRH 120 Query: 122 FAFYGLPESSGKRW----ATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNR---L 174 FAF RW + R AF +A+ R + Q R L Sbjct: 121 FAFV-------HRWELGVSQRRRDAFTAELAQYDRRCEILSWQTQRGRQADTRQQRHRWL 173 Query: 175 ADWLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSS 234 A L LP I A D A I++ + VP+++ V+G+DN E + LSS Sbjct: 174 AQRLSELPKPLAIFAPRDIEAVEIIEAAMAISALVPDEISVLGVDNTETICDCLQTPLSS 233 Query: 235 VAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYI 294 + Q+GY+ A LL RL+ E+ P + + P RV+ERRSTD ++ P V A+ ++ Sbjct: 234 IDNNLEQVGYEGAALLSRLMAGEQSPTETFYIAPSRVVERRSTDSIAVPHPQVAAALRFM 293 Query: 295 RNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSIN 354 + +A I + V V +SRS LEK F+E + +L +A+ +L+ T I Sbjct: 294 QENAHLPISMVDVFRTVAMSRSGLEKAFRENYVRPPMEELRRIRLLRAKKMLLQTHEKIV 353 Query: 355 EISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSEV 390 I++ G+ + Q VF++ TPK++R + + Sbjct: 354 NIAKSTGFETSQNLCRVFRQCVGMTPKQFRTQGAVI 389 >UniRef50_UPI00019688DE hypothetical protein BACCELL_02763 n=1 Tax=Bacteroides cellulosilyticus DSM 14838 RepID=UPI00019688DE Length = 372 Score = 295 bits (756), Expect = 2e-78, Method: Composition-based stats. Identities = 105/364 (28%), Positives = 170/364 (46%), Gaps = 8/364 (2%) Query: 25 GVGEYLQASQSEWDIFIEEDFRARIDKIKDWLGDGVIADFDDKQIEQALADVDVPIVGVG 84 G + + S D E+ ID + W D ++ + E+ L + +P++ Sbjct: 4 GNWRFYRIPLSREDFNDEKAIETVIDIAQRWGADAIMGQLSEVNTER-LRSIGIPVI--- 59 Query: 85 GSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRFAFYGLPESSGKRWATEREYAFR 144 + + I D Y E A + KG FAFYG ++ W+ ERE F Sbjct: 60 -LQNYTNRVDGISNITGDYYGTGEMAANYFLRKGYTNFAFYGTSDT---IWSREREEGFC 115 Query: 145 QLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQTLPPQTGIIAVTDARARHILQVCEH 204 +AE +Y Q L WLQ LP T + A D A I +VC Sbjct: 116 TRLAEVGQHAYIYNEESNIRYGSTSDQQALQAWLQQLPHPTALFACDDVFALRITEVCGI 175 Query: 205 LHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRI 264 +I VP+ L V+G+DN+E+ +S LSS+ + GYQAAKLLH ++ +++P I Sbjct: 176 SNIQVPQDLAVLGVDNDEILCNMSDPPLSSIVLDVKNGGYQAAKLLHSIVKDKQLPQFNI 235 Query: 265 LVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKE 324 ++ P+R+ R+ST+ S++D V+ A+ I I + ++L+ + +SR LEK F++ Sbjct: 236 VINPIRIERRKSTEGYSVSDKLVLGALKLIETENNGLISITEILNRLCVSRRVLEKHFRK 295 Query: 325 EVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 EVG +I+ I + L+++ L I +I+ GY FK+ Y TP +YR Sbjct: 296 EVGISIYQYILDYRTSCFAEKLLTSDLPIMDIAFELGYEDYINLTKSFKRIYQMTPTQYR 355 Query: 385 DVNS 388 + Sbjct: 356 NYYK 359 >UniRef50_B4CUN0 Transcriptional regulator, AraC family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUN0_9BACT Length = 383 Score = 292 bits (747), Expect = 2e-77, Method: Composition-based stats. Identities = 100/379 (26%), Positives = 173/379 (45%), Gaps = 18/379 (4%) Query: 18 YDRQVVEGVGEYLQASQSEWDIFIEEDFRARIDKIKDWLGDGVIADFDD-KQIEQALADV 76 YD ++++G+ Y A++ W + ++ W GDGV+A + +A V Sbjct: 14 YDHRLLQGIATY--ATEHRWHLAAHSIIHEKVIPW-GWEGDGVLAWLAAGDDLAHFVASV 70 Query: 77 DVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRFAFYGLPESSGKRWA 136 P V + + P ++ D+ + H ++G+ F FY S + W+ Sbjct: 71 KKPTVDFS----MRRPHLPFAHVVQDHAKTGQLVASHFLDRGLRHFRFY----SDSENWS 122 Query: 137 T-EREYAFRQLVAEEKYRGVVYQGLETAPEN-----WQHAQNRLADWLQTLPPQTGIIAV 190 ER F + + ++ ET+ + W + L +Q+ P + Sbjct: 123 QVERGEGFARALTASGEECEWWRWRETSGQGSGQNQWLRRREWLLRQIQSAPKPLAVFTA 182 Query: 191 TDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLL 250 A I +VC I VP ++ ++GID+ L+ + ++S V + GY+ A+LL Sbjct: 183 NGTLAVEIQEVCAEAKIQVPSEVAIVGIDDYLLSVGAANRSISGVDTNLEEQGYRGAELL 242 Query: 251 HRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDA 310 R++ P++ + +PP +VI R+S+D ++ V + +H+I H + I VD V A Sbjct: 243 DRMMRGARQPVKPVRIPPAQVITRKSSDILAVNHGGVARGLHFIAEHFAQAISVDDVARA 302 Query: 311 VGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYS 370 G+SR L + F E VG T I +L A+ LL T I I+Q GYPS+ F+ Sbjct: 303 AGMSRRGLHQAFSEHVGCTPGDKIRGVRLNLAKRLLAETEDKIESIAQQSGYPSINTFFI 362 Query: 371 VFKKAYDTTPKEYRDVNSE 389 F++A TTP E+R + Sbjct: 363 AFRRAEKTTPAEFRKIARR 381 >UniRef50_A4BCC5 PurR protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BCC5_9GAMM Length = 371 Score = 288 bits (738), Expect = 2e-76, Method: Composition-based stats. Identities = 113/382 (29%), Positives = 187/382 (48%), Gaps = 17/382 (4%) Query: 10 LLFNANKAYDRQVVEGVGEYLQASQSEWDI-FIEEDFRARIDKIKDWLGDGVIADFDDKQ 68 +LF+ + YDR++ +G+ + + S I F+ D + +DW D +IADFD Sbjct: 1 MLFDIKQPYDRKITDGILDAMHNSNRNLQITFMTYDEALLVAHDQDW--DAIIADFDRLP 58 Query: 69 IEQALADVDVPIVGVGGSYHLAESYPPVHYI--ATDNYALVESAFLHLKEKGVNRFAFYG 126 A + P V V + + I A D+ + + A HL G +FA++ Sbjct: 59 NIDLCASLKAPTVAVFSNLQRMPELTDIPVIFLAPDSEKICQLARDHLLACGCRQFAYFA 118 Query: 127 LPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQTLPPQTG 186 WA ER F+Q V EE ++ Q L P TG Sbjct: 119 GTADDIGLWARERRLCFKQAVLEEGLNWAGAYTTQSIRHFLQTD----------LAPGTG 168 Query: 187 IIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQA 246 + +D +AR ++ + ++L+I +P +LCVIGIDN+E+ LSR+ +S+V +G A Sbjct: 169 FLCASDTQARQLITLAQNLNISIPSQLCVIGIDNDEVENQLSRIPISTVTLAPSDLGKAA 228 Query: 247 AKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQ 306 + L L + + + L+ P V+ R S DP + A+ +I H + IK +Q Sbjct: 229 FEALFELSTQHQPVTK--LIQPGEVMNRLSAFLEVNDDPLLSTALKFIYKHYHRSIKAEQ 286 Query: 307 VLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQ 366 V+ SR+ LE RFK + ++IH ++H +LE A+ +L +T I+E++ CG+ S Q Sbjct: 287 VIAECKTSRNTLESRFKTVLEKSIHQVLHDVRLENAKDMLKNTRKGIDEVAIQCGFSSPQ 346 Query: 367 YFYSVFKKAYDTTPKEYRDVNS 388 Y Y +F+K TP +YR++N+ Sbjct: 347 YLYYIFRKELGMTPTKYRELNT 368 >UniRef50_A6DP72 Xylose operon regulatory protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DP72_9BACT Length = 375 Score = 287 bits (735), Expect = 4e-76, Method: Composition-based stats. Identities = 93/376 (24%), Positives = 186/376 (49%), Gaps = 12/376 (3%) Query: 4 KRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEED-FRARIDKIKDWLGDGVIA 62 + RI L F ++ + G+ Y + +W + + +I +I DG+IA Sbjct: 2 NKKRIALAFPMGSSHWEKTAYGIRSYCNQERDKWKLITNPETHDLKISEINLDAIDGIIA 61 Query: 63 DFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRF 122 +K L VP V + G+ ++ + + D Y + + A H E+G F Sbjct: 62 VVRNKTDLDHLKKHSVPCVNISGTLQKSD----LPRVCPDFYQMGQLAAQHFFERGFQNF 117 Query: 123 AFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQTLP 182 A++GL E+ ++ F + ++++ + A N+ + ++L++L Sbjct: 118 AYFGLSETV---FSERMYQGFHKELSKKTKTCEKLEVTFGA--NFLEQDELIHEFLKSLK 172 Query: 183 PQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQM 242 I+A D RA+ +L+ CE + + VPE + ++G +N+ ++ S LSS+ + +++ Sbjct: 173 LPCAILAAHDPRAQILLEACEEMALRVPEDIAILGSNNDTVSCEFSSPPLSSIERDDQKI 232 Query: 243 GYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGI 302 G++AAK L L+ ++E +++PP++V R+ST+ + P + +A+ +I + + Sbjct: 233 GFEAAKALDMLM-RQEACQHELIIPPLKVKTRKSTEIFTPKHPEIKRALDFIEEQFDQSL 291 Query: 303 KVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLI-STTLSINEISQMCG 361 V + D +G SR LE F+EE+ ++ I +L+KA LL S+ L++++ISQ G Sbjct: 292 NVQMICDYLGRSRRWLEYAFREELQQSPKHFIDERRLKKALQLLQGSSQLNLSQISQQSG 351 Query: 362 YPSLQYFYSVFKKAYD 377 + S+ +F K + Sbjct: 352 FSSVDQMNQLFIKKHG 367 >UniRef50_D2R9H5 Transcriptional regulator, AraC family n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R9H5_9PLAN Length = 416 Score = 279 bits (715), Expect = 9e-74, Method: Composition-based stats. Identities = 91/411 (22%), Positives = 178/411 (43%), Gaps = 32/411 (7%) Query: 2 FTKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARI--DKIKDWLGDG 59 K R+ ++ + R G A++ W+ I+E + + L DG Sbjct: 1 MPKSRRVAIMLDLRWPLKRHADIFAGTQRYAAEKGWESVIDEYVAEHLLEQPKQARLYDG 60 Query: 60 VIADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGV 119 VI ++ + + +P+V + + + P V + D A+ HL +G+ Sbjct: 61 VIGRIP-ARLAELQSRFPIPLVNIWFNSPVRAPLPGVFH---DAAAVGRLEAEHLLARGL 116 Query: 120 NRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGL---ETAPENWQHAQNRLAD 176 +FA + + E+ AFR +V+E + +V + + W+ + + Sbjct: 117 RQFAVL----TRKDKAQLEQAAAFRAVVSEAGFPCIVERLPLVPSRSYATWKKTERLIDS 172 Query: 177 WLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVA 236 W+ P G+ T+ R ++Q+C +P + ++ NEE R +LSSV Sbjct: 173 WMDHWQPPIGVSICTEVMGRLVVQLCRRRGWRIPGDVAIVAGMNEETLCTHPRPSLSSVE 232 Query: 237 QGARQMGYQAAKLLHRLLDKEEMPLQ-------------------RILVPPVRVIERRST 277 G ++GY+AA+LL +L+ ++ + + +++PP +I R ST Sbjct: 233 IGYERIGYEAARLLDQLMHQQSLRSRSKKRLSHLQPSARKPSQPPHLILPPQGMIVREST 292 Query: 278 DYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAE 337 D+ ++ D + QA+ +I +H+ I D V +++ + L++RF++ + I I Sbjct: 293 DFYAVEDKLIAQALEFIASHSHLPINCDTVAESLHVHTRTLQRRFRQVLDRPIADEIRRV 352 Query: 338 KLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNS 388 + E+A+ LI + S+ EI++ G+ Y VF + TP YR Sbjct: 353 RTERAKRELIQSDRSLTEIARDVGFSDRMQLYEVFCREVGVTPSHYRKQRR 403 >UniRef50_UPI0001745892 xylose operon regulatory protein n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001745892 Length = 394 Score = 277 bits (708), Expect = 6e-73, Method: Composition-based stats. Identities = 97/390 (24%), Positives = 165/390 (42%), Gaps = 22/390 (5%) Query: 12 FNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARIDKI---KDWLGDGVIADFDDKQ 68 F + + R V +G+ +++QA W I D + + W GDG+I Q Sbjct: 5 FPSWITFQRGVFDGILKFMQA-HEPWVIEAPMDSGGELAPVVIGPRWHGDGLIVFRYTPQ 63 Query: 69 IEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRFAFYGLP 128 A +P+V + + L +P I DN +A HL G+ FA+ G Sbjct: 64 EATAWRKAGIPVVNLS-TERLGGVFP---SIVPDNEGGGAAAAKHLLTLGLRHFAYVGRA 119 Query: 129 E----------SSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPEN--WQHAQNRLAD 176 +R++ ERE FR+ + E + +++Q W+ + Sbjct: 120 TPFVDDGLTGLGVARRYSQEREAGFRKTLEEAGFTPLLFQVSTRRNNGPVWEELHETYSG 179 Query: 177 WLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVA 236 LQ LP G+ A D A +LQ + VP+ + ++G +++ + LSSV Sbjct: 180 LLQALPRPCGVFAADDMLAHGLLQAAQSSGARVPQDVALVGFNDQSHFCQAATPPLSSVT 239 Query: 237 QGARQMGYQAAKLLHRLLDKEEMPLQRI-LVPPVRVIERRSTDYRSLTDPAVIQAMHYIR 295 +G +AA+ ++ L+ P I VP V R ST+ S+ DP V A+ IR Sbjct: 240 YPGEAIGLRAAEAIYALMQGLPAPGGHIQRVPVSGVTIRESTNVLSIRDPLVASAVRLIR 299 Query: 296 NH-ACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSIN 354 A +V ++ D +G+S S L +RF E +G + + +L+ R L +T L Sbjct: 300 KQAAATAPRVGEIADQLGVSASLLRQRFLEALGISPKEEVDRARLDIIRHWLTTTKLGPG 359 Query: 355 EISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 +I+ G+ F++ T ++YR Sbjct: 360 DIAAKTGFLDAAELRRFFRRGTGQTLQDYR 389 >UniRef50_D1N410 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N410_9BACT Length = 380 Score = 272 bits (697), Expect = 1e-71, Method: Composition-based stats. Identities = 94/395 (23%), Positives = 167/395 (42%), Gaps = 25/395 (6%) Query: 1 MFTKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARIDKIKDWLGDGV 60 M +R + L + ++ +G+ +Y +A W + I R + ++ W G+G+ Sbjct: 1 MEKERKTVLLAL---AWHLEKLTQGIADYARAHN--WHLLIHRGGELR-EILRRWRGNGI 54 Query: 61 IADF----DDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKE 116 I+ F D E+ LA + + P + D+YA+ A + Sbjct: 55 ISSFWNAYTDSATEEVLAARSWDATRMVSLVPIRNPRIPCRVVREDDYAIGTLAAEYFLG 114 Query: 117 KGVNRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLAD 176 G +A Y + R FR + + A + + L Sbjct: 115 TGHRNYAVYS---------DSVRMTGFRDRLRRSGFACCDLSPYRAA----EREEAELLG 161 Query: 177 WLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVA 236 WL+ LP + D A +L I VP++L ++G+ N+EL + V+LSSV Sbjct: 162 WLRELPKPCAVFCENDWDAAELLNTAFWGKIAVPDELAILGVGNDELVCMAASVSLSSVD 221 Query: 237 QGARQMGYQAAKLLHRLLDKEEMPLQRILVPPV-RVIERRSTDYRSLTDPAVIQAMHYIR 295 ++G AA L +L+D E P + + P V+ERRSTD+ ++ +P +I+ + Y R Sbjct: 222 SRLYELGQLAAAELDKLIDGTEAPEGALFLKPEPLVVERRSTDFYAVENPELIRMIEYFR 281 Query: 296 NHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLI-STTLSIN 354 NHAC+ V + S S L K F + + + ++L A S L + Sbjct: 282 NHACEPFSVAEAARRFHTSESALYKLFVRNLKISPKQFVLEQRLRNACSYLKMERAWPME 341 Query: 355 EISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSE 389 E+++ G+P+ +S F+K + T+P +R + Sbjct: 342 EVARRAGFPTACAMFSTFQKRFGTSPGNWRKNSRS 376 >UniRef50_B5JEL5 Transcriptional regulator, AraC family protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JEL5_9BACT Length = 387 Score = 272 bits (696), Expect = 1e-71, Method: Composition-based stats. Identities = 108/397 (27%), Positives = 185/397 (46%), Gaps = 23/397 (5%) Query: 2 FTKRHRITLLFNANKAYDRQVVEGVGEYL-----QASQSEWDIFIEEDFRARIDKIKDWL 56 TK RI ++ + + Y RQ G Y W E + +K Sbjct: 1 MTKAKRIQVVPDMSLEYFRQATVGALRYAFNTGRMEFPGRW--LDHERYGDISPLVKRDD 58 Query: 57 GDGVIADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKE 116 G+I D E AD+++P+V + S S P + + D+ ++ A HL + Sbjct: 59 IHGLIVAAHDAAEEARFADLEIPVVNISNSM----SAPRIPVVTQDDVSVGRLAAEHLID 114 Query: 117 KGVNRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLAD 176 +G FAF+G GK ++ ER FRQ + + + P + + Sbjct: 115 RGCRNFAFWG---DKGKSYSDERLQGFRQTLGSRPLQVKLGGRNRVRPHPVFKS---MKA 168 Query: 177 WLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVA 236 +++TLPP+TG+ A D A + L+ L VP+ + V+G +++ + V LSS+ Sbjct: 169 FMKTLPPKTGLFATLDDSALYFLRAARELGRSVPDDIAVLGAGDDDFLVEIESVPLSSIR 228 Query: 237 QGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRN 296 AR++GYQAA LL +++K+ + I +P + ER STD DP V + M Y+R+ Sbjct: 229 LPAREIGYQAAALLDEMIEKDTRNVDSIRLPVHGISERHSTDALQFEDPVVTKVMRYLRD 288 Query: 297 HACKGIKVD--QVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSIN 354 I ++ G+SRS L+ RF+ VG ++ IH ++ +A+ LL ++ L++ Sbjct: 289 ----DITCQASDLIAISGVSRSGLQTRFRAAVGRSLLEEIHRARISQAKHLLATSDLTLE 344 Query: 355 EISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSEVM 391 I+ G+ S Q +++F K+ T P +R N + Sbjct: 345 NIADRVGFNSAQRLHAIFTKSVGTPPGVFRTRNRAIA 381 >UniRef50_B5JIL8 Transcriptional regulator, AraC family protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JIL8_9BACT Length = 455 Score = 269 bits (689), Expect = 1e-70, Method: Composition-based stats. Identities = 96/388 (24%), Positives = 167/388 (43%), Gaps = 16/388 (4%) Query: 7 RITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARIDKIKDWLGDGVIADFDD 66 R T ++ +++ ++G+ Y A + W + D + WLG GVI Sbjct: 79 RQTKIWVSSQTAQPSFLQGIIRY--AKKQSWQL--TTDLLQSGNVSGSWLGHGVIKYLPV 134 Query: 67 KQIE-QALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRFAFY 125 + Q + D+P V + L++ + DN+A+ A HL + FA+ Sbjct: 135 PTFDSQTPSSTDLPCV----TASLSDQPTTGLRVQADNFAIGRQAAEHLINRNCRNFAWL 190 Query: 126 GLPESSGKRWATEREYAFRQLVAEEKYRGVVYQG--LETAPENWQHAQNRLADWLQTLPP 183 R F + + + L+T+ + + +Q L Sbjct: 191 PYAHDKTN---QIRYMGFLSHLRDRGFSCRQLAPPLLDTSVDPCRERILWRQAMIQPLEG 247 Query: 184 QTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMG 243 +TG+ A +D+ A + ++ VPE L ++GI N+ + ++LSS+ ++G Sbjct: 248 RTGLFASSDSLAIEVAELVGETGTRVPEDLAILGIGNQTAECESAPISLSSIDPNLEELG 307 Query: 244 YQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKG-I 302 +QAAKLL L E I V P V R ST +L + V QA+ +I NH + Sbjct: 308 FQAAKLLDAALKSETNANSCIHVSPTGVEARDSTAISNLENQRVAQALVFISNHYPDPRL 367 Query: 303 KVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLIS-TTLSINEISQMCG 361 V V +++ ISR LE+ F+ E G TI I ++ +A LL L+++ I+ G Sbjct: 368 GVCSVAESLNISRRQLERDFRNEKGCTIREFIEHTRMNEASRLLSERPALTVSAIADQVG 427 Query: 362 YPSLQYFYSVFKKAYDTTPKEYRDVNSE 389 + F+ +F+K + TP YR+ + Sbjct: 428 ISAQGNFFRIFRKHFGLTPSAYREQQTS 455 >UniRef50_UPI000174567C xylose operon regulatory protein n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI000174567C Length = 419 Score = 264 bits (675), Expect = 4e-69, Method: Composition-based stats. Identities = 84/392 (21%), Positives = 172/392 (43%), Gaps = 19/392 (4%) Query: 3 TKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEE-DFRARIDKIKDWLGDGVI 61 T +H+ ++F A YD + +G+ ++++ +++W++ + R +K DG++ Sbjct: 30 TLKHK-PVIFMALSFYDASLHDGIAQWVR--ENDWELDVSNFPVLMRPPTVK---CDGIL 83 Query: 62 ADFDDKQIEQALADVDVPIVG--VGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGV 119 + + L D P+V + + L E+ + ++ D + HL G Sbjct: 84 TTITRPETLEWLKPYDCPMVRMLIAPTPELEEASGHIPLVSADYESAGRLGAKHLLTLGQ 143 Query: 120 NRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVV--YQGLETAPENWQH-----AQN 172 FAFY + F + + + V + G + + + Sbjct: 144 PHFAFYQRGVGPDVLAIRD---GFVETLKAAGKQVTVLNFMGDHPNLDPFTRVPRADRRE 200 Query: 173 RLADWLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVAL 232 LA ++ LP I+A D A ++ + + +P + ++G D+ L +S V++ Sbjct: 201 WLARRIRALPKPLAIMAEDDRFAIEVMHAVRAMGLRIPTDVAILGCDDNRLALSVSPVSM 260 Query: 233 SSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMH 292 SSV R +GY AA +L L+ +E P + I +P RV+ R ST + + V +A+ Sbjct: 261 SSVDTNLRGVGYAAASILAGLIQGKEKPSRPIRIPSRRVLARESTATYAGSHQGVSEALR 320 Query: 293 YIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLS 352 ++R H + ++ +V +S L+ ++E T++ I ++ A +L T L Sbjct: 321 FVRQHFREPLQASRVAKHARMSLRGLQSALRQEAQLTLNDEIARLRVTAASEMLEETDLK 380 Query: 353 INEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 ++ I+ G + VF++ Y TP+++R Sbjct: 381 LDSIAADVGLRDAKNLCRVFRQRYGMTPQQWR 412 >UniRef50_A6DPD5 Xylose operon regulatory protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DPD5_9BACT Length = 376 Score = 260 bits (664), Expect = 8e-68, Method: Composition-based stats. Identities = 87/386 (22%), Positives = 163/386 (42%), Gaps = 17/386 (4%) Query: 2 FTKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDI-FIEEDFRARIDKIKDWLGDGV 60 +K I L + YD ++ +GV + ++ W + F++ FR+ W GDG Sbjct: 1 MSKTPEIILALDW---YDYRIHQGVVNVAR--ENGWSLLFLQNSFRSSAVPA-AWRGDGA 54 Query: 61 IADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVN 120 I + Q +P+V +G + H + + TDN L A H E+G Sbjct: 55 ITLIHSAETYQFFQTHKIPVVDLGLNKHGLA----IPRVVTDNVELGRMAAEHFLERGFT 110 Query: 121 RFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENW-QHAQNRLADWLQ 179 F Y L ++ + + ER AF++ + ++ Y + + + +Q L L Sbjct: 111 HF--YALSTNNIQMF-QERYQAFKETLMKKGYDCEIIEVPNLYDTHLLDLSQAILKQKLS 167 Query: 180 TLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGA 239 + A D+ A + + E + + VP L ++G DN L LSSV Sbjct: 168 KFKNPAALFAYEDSWAAQWIYLAESMGLKVPNDLAILGADNNPLIARSLSTPLSSVETNQ 227 Query: 240 RQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHAC 299 +G QAA +L L++ + + + P V+ R STD + ++P + A+ + N Sbjct: 228 EGLGQQAALVLKDLMEGKGIGDHLYKLQPTSVVTRASTDVIASSNPVIRTALEIMNNDIS 287 Query: 300 KGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQM 359 I +V + +++ L++ F+ + ++ ++ ++ L+ T S+ EI+ Sbjct: 288 --ITAAEVAQQMDMTQQGLQRAFRTHFHLSPGQILRKLRIRFIKNALVHTDKSMEEIAFE 345 Query: 360 CGYPSLQYFYSVFKKAYDTTPKEYRD 385 G+ S Y FK+ TP Y+ Sbjct: 346 AGFTSTPSLYLFFKREAGETPGNYKK 371 >UniRef50_Q6LUY4 Putative uncharacterized protein n=1 Tax=Photobacterium profundum RepID=Q6LUY4_PHOPR Length = 367 Score = 254 bits (650), Expect = 3e-66, Method: Composition-based stats. Identities = 89/377 (23%), Positives = 157/377 (41%), Gaps = 21/377 (5%) Query: 11 LFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARIDKIKDWLGDGVIADFDDKQIE 70 + ++ +DRQV++G+ L + + +E + W D VIAD+D + Sbjct: 1 MLDSMIYFDRQVLKGIKAKLDEANVNVSLHLESGTLLEELTREHW--DYVIADYDKPHFQ 58 Query: 71 QALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRFAFYGLPES 130 Q + V V ++ + + + DN L +A + FY + Sbjct: 59 QIVQTCGAKSV-VYSNHQRDDFSEKMSSVVMDNTCLASAALRRFLDAKYTHVGFYTNEQD 117 Query: 131 SGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQTLPPQTGIIAV 190 + + W ERE AF+ L + V A + G+ Sbjct: 118 ALQPWGQEREEAFQLLTMQAGIHFVHDVHQAMAARQF----------------PFGVYCS 161 Query: 191 TDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLL 250 +D AR + Q C+ I VP+ + +IG D+++ R LS + LSS+ ++G + L Sbjct: 162 SDRSARKLAQYCQCNAIAVPKDVAIIGTDSDDTERMLSPLPLSSLDVNPYELGRFCVETL 221 Query: 251 HRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDA 310 + + + R+ P + E +T + + D V +A +IRN+ I + QV D Sbjct: 222 IKTIRFKRTL--RLRYAPETLYEAATTTHCNHVDDIVSRATLFIRNNFHLNINIKQVTDY 279 Query: 311 VGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYS 370 SR L+ RF G T H + ++ +A+ LL + ++ I+ CGYP+ Y Sbjct: 280 CRTSRKTLDTRFLAAQGITAHQYLTEVRVARAKYLLAHSQNKLDSIALQCGYPNQSYLTQ 339 Query: 371 VFKKAYDTTPKEYRDVN 387 VF K +P +YR + Sbjct: 340 VFGKQLGVSPSQYRQAS 356 >UniRef50_C0AAZ9 Transcriptional regulator, AraC family n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0AAZ9_9BACT Length = 409 Score = 250 bits (639), Expect = 6e-65, Method: Composition-based stats. Identities = 89/399 (22%), Positives = 177/399 (44%), Gaps = 22/399 (5%) Query: 8 ITLLFNANKAYDRQVVEGVGEYLQASQSEW--DIFIEEDFRARIDKIKDWLGDGVIADFD 65 + +L + + Y R V G Y ++ D +++ + + + + G+I Sbjct: 18 VQILHDGSLEYFRNVTLGARHYAFDTKRFVLADRWLDHETASWHELVARDAIQGIIVAAH 77 Query: 66 DKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRFAFY 125 +++ + + + + + D+ + A HL G F F+ Sbjct: 78 REEMVKQFTALK----VPVVNVSNVVPQLRLPLVTQDDVGVGRLAAEHLLACGCRAFGFW 133 Query: 126 GLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQTLPPQT 185 G R++ +R FR ++ + ++ ++A E + R+ +WL LP Sbjct: 134 G---EWASRFSEQRLTGFRDVLGKHGLGQALHVNGQSAMEPATESFARMVEWLPLLPRPI 190 Query: 186 GIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQ 245 G V D A ++ + L VP+ + V+G ++E V LSSV + ++GY+ Sbjct: 191 GFFCVMDTMALYLQRAVTSLGWRVPDDVAVLGAGDDEFWVKFENVPLSSVKLPSLKIGYE 250 Query: 246 AAKLLHRLLDK----------EEMPLQRI---LVPPVRVIERRSTDYRSLTDPAVIQAMH 292 AA L L+ + E+ R+ ++P + R+STD ++D AV +A+ Sbjct: 251 AAAFLDELIVRGRRRREAGWSEDGGQGRVPVRVLPVSEIAARQSTDTLFVSDEAVARAVR 310 Query: 293 YIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLS 352 +IR +A + + VD+++ A G++R+ L++RFKE +G ++ + ++ A+ LL + L Sbjct: 311 HIRANAARELYVDEIVRAAGVARTALQRRFKEVLGHSLMDELTRARIVLAQGLLAGSDLP 370 Query: 353 INEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSEVM 391 + +++ G PS VF+ +P EYR VM Sbjct: 371 METVAERSGLPSSHRLSVVFRAETGMSPTEYRRKFRVVM 409 >UniRef50_C0A5R8 Transcriptional regulators-like protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A5R8_9BACT Length = 374 Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats. Identities = 95/373 (25%), Positives = 164/373 (43%), Gaps = 18/373 (4%) Query: 21 QVVEGVGEYLQASQSEWDIFIEEDFRARIDKIKDWLGDGVIADFDDKQIEQALADV--DV 78 + G+ Y + ++ W + A K + DG+I + Sbjct: 10 SLWHGLRAYAR--EAGWLLAAPPTLLAGPPKAPR-VFDGLII-LPTEYTAFDARKFFPGA 65 Query: 79 PIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRFAFYGLPESSGKRWATE 138 IV + G A+ P + D+ + + A +L G F GL S K + Sbjct: 66 KIVDILG----AKGLIPDARVIVDHKKVGQMAADYLHSLGCKSF--LGLDLKSYKYNLRK 119 Query: 139 REYAFRQLVA-----EEKYRGVVYQGL-ETAPENWQHAQNRLADWLQTLPPQTGIIAVTD 192 R A++ + ++ + + Y G E + N RL L +P G+ + Sbjct: 120 RNAAYKAQLEALDIKQDYIKTLHYDGWGEYSAANLSILPARLKRALAGMPLPVGVFSPDG 179 Query: 193 ARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLHR 252 A Q L VP+ + V+ DN+ ++RV LSSV ++GY+AA+LL R Sbjct: 180 YAADVFEQGVMELGYRVPDDIAVLSTDNDRGICEMARVPLSSVDVNLSKLGYEAARLLDR 239 Query: 253 LLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVG 312 L+ ++ + I++PP+ + +RRST+ S DP V M YIR H + I + ++ + Sbjct: 240 LMAGDKNAPREIVIPPLGIEKRRSTERTSCDDPIVTAIMEYIREHFMEKITAELIIHDIH 299 Query: 313 ISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVF 372 SR+N RF++ +G +I I ++E A+SLL +T ++ ++++ GY + F F Sbjct: 300 ASRTNAFVRFRKVMGRSIGEEIERVRIEHAQSLLTTTDYKVDAVARLSGYLNTSAFCRAF 359 Query: 373 KKAYDTTPKEYRD 385 K TP E R Sbjct: 360 KACTGRTPTEVRS 372 >UniRef50_D1N888 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N888_9BACT Length = 379 Score = 242 bits (617), Expect = 2e-62, Method: Composition-based stats. Identities = 87/401 (21%), Positives = 167/401 (41%), Gaps = 36/401 (8%) Query: 1 MFTKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARIDKIKDWLGDGV 60 M K I F Q+++ + Y + W I + + + W GDGV Sbjct: 1 MPKKTPYILCAFKQPND---QLLQPI--YAFGQRQGWLIELCTETL-----PQSWQGDGV 50 Query: 61 IADFDDKQIEQALADVD-VPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGV 119 I+D+ + AL D+ +P+V + V + +D A+ A +G Sbjct: 51 ISDYLTLEELAALRDIGKIPVV-----SRILPPGGNVRSVLSDTRAVARVAVDFFAGQGF 105 Query: 120 NRFA----------FYGLPESSGKRWATEREYAFRQLVAEEK--YRGVVYQGLETAPENW 167 FA G+P S G+ A +L E Y +E P + Sbjct: 106 RVFASVSARDFPGEVCGIPVSPGR--------ALLELTRERGLEYHAHYCAPVEGNPPAY 157 Query: 168 QHAQNRLADWLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYL 227 + ++L+ LP + + + + E L + VPE++ ++ L Sbjct: 158 PEMVAGIREFLRNLPKPAALTLTSVWVVAPVWRAVEELELRVPEEIAILCNSQRPLYTCY 217 Query: 228 SRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAV 287 + V LS ++ +G + A+ + ++LD +++PL+ +V P VI R STD ++ + Sbjct: 218 TPVPLSGISGEHGTVGLKLAETMQKMLDGDDVPLEPEVVSPSAVIRRASTDIIAVPHLKL 277 Query: 288 IQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLI 347 A+ ++ + + + + G+S+S L + F+ +G T + ++++ ++LL Sbjct: 278 ATAIRFLIQNCGTSVGIGEAARYAGLSQSMLNRLFRRYLGRTAAGFLQQLRIDRMKNLLD 337 Query: 348 STTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNS 388 ST LS++EI+ GY S F++A P YR++ Sbjct: 338 STGLSLSEIAAQTGYSSPVSLSLAFRRATGMQPGAYRELRR 378 >UniRef50_C0ACC5 Transcriptional regulators-like protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0ACC5_9BACT Length = 397 Score = 235 bits (599), Expect = 3e-60, Method: Composition-based stats. Identities = 92/370 (24%), Positives = 159/370 (42%), Gaps = 16/370 (4%) Query: 24 EGVGEYLQASQSEWDI-FIEEDFRARIDKIKDWLGDGVIADFDDKQIEQALADVDVPIVG 82 G+ Y + +++W + F+ K DG+IA +++ + IV Sbjct: 37 YGIRAYAR--EADWTLSFMRNAQDYPTGSTKV---DGLIAFIGHTKVDFRQLYPNAKIVD 91 Query: 83 VGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRFAFYGLPESSGKRWATEREYA 142 + G + +P I D+ + A +L G RF +G R + Sbjct: 92 LRGL----DEFPADSSIRIDHEHVSRLAADYLYNLGYRRFLAFGCKPV---EPIVTRIRS 144 Query: 143 FRQLVAEEKYRGVVYQGLETAPE---NWQHAQNRLADWLQTLPPQTGIIAVTDARARHIL 199 F++ + E + N + R+ ++ + A D A + Sbjct: 145 FQRCLEERGLTVEEIFLNYWTEQIVINPGDLKARITKIVRKTGLPLAVYAPDDMYAEAFI 204 Query: 200 QVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEM 259 Q L +P+ + V+G++N RV +SS+ ++GY+ A+LL L+ + Sbjct: 205 QTALDLGYRIPQDIAVLGVNNSRDICEECRVPISSIDVNFSRLGYEGARLLDGLMRGDIR 264 Query: 260 PLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLE 319 QRI++PP+ + +R+STD + TD V+ YIR H + I ++ VL + ISRS Sbjct: 265 KFQRIVIPPLTIEKRQSTDSAAETDKTVVAIQQYIREHFAERITIETVLRDLHISRSMAF 324 Query: 320 KRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTT 379 RF VG I I ++ AR LL ST I+ +++MCGY F +FK+ + + Sbjct: 325 VRFTRAVGHPIGREIINVRISHARHLLTSTDYKIDVVARMCGYEDTSAFGRLFKQLHQQS 384 Query: 380 PKEYRDVNSE 389 P YR +E Sbjct: 385 PAAYRKKLAE 394 >UniRef50_D1N1K4 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N1K4_9BACT Length = 388 Score = 220 bits (560), Expect = 8e-56, Method: Composition-based stats. Identities = 73/376 (19%), Positives = 150/376 (39%), Gaps = 19/376 (5%) Query: 21 QVVEGVGEYLQASQSEWDIFIEEDFRARIDKIKDWLGDGVIADFDDKQIEQALADV-DVP 79 Q+V + + + +W + + W GDGV+ D + + + + P Sbjct: 14 QIVREIHRFGRDH--DWQVELCGG-----RIPPGWSGDGVLTDCLPLEELKKIRNFERTP 66 Query: 80 IVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRFAFYGLPESSGK--RWAT 137 +V H V +A D + E + ++G FA + + + Sbjct: 67 VV-----SHTLTPGGNVRTVAGDTRRIAEMIADYFLDRGFRNFAAIDARDWNRQGCIHGI 121 Query: 138 EREYAFRQLVAEEKYRGVVYQGLETAPE----NWQHAQNRLADWLQTLPPQTGIIAVTDA 193 + + R+ + +R V E ++ RLA++ +P + Sbjct: 122 DPVVSLREELERRGFRLEVCHWKEDLRPEELADYGSVLARLAEFFSEMPRPLALFIPNGR 181 Query: 194 RARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRL 253 +V L I VPE+ V+ +E + + + ++ ++G +A+LL R+ Sbjct: 182 HLTVAYRVIHQLGIRVPEEFAVLCNTDEPFFTENASIPTTHISGEPLKLGRMSAELLERM 241 Query: 254 LDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGI 313 ++ E +P + VPP ++ RSTD ++++P + A+ + + I V+ A G+ Sbjct: 242 MNAETVPEAPVWVPPASIVSSRSTDVLAISNPKLAAAVDFFLGNFMNFISVEDAAAAAGL 301 Query: 314 SRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFK 373 S S L + F++ + ++ + + + R L + L + EI++ GY S F+ Sbjct: 302 SPSMLVRLFRKHLRKSPSEFLRGLRFNRIRHFLDKSDLPLPEIARRTGYGSAMSLSIAFR 361 Query: 374 KAYDTTPKEYRDVNSE 389 + Y P EYR Sbjct: 362 REYGIAPGEYRRTRRR 377 >UniRef50_C0A5A7 AraC-type DNA-binding domain-containing protein-like protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A5A7_9BACT Length = 388 Score = 209 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 87/371 (23%), Positives = 157/371 (42%), Gaps = 9/371 (2%) Query: 21 QVVEGVGEYLQASQSEWDIFIEEDFRARIDKIKDWLGDGVIADF-DDKQIEQALADVDVP 79 ++ GV Y + + W + I D DGV+ +D + + Sbjct: 25 KLEYGVRAYARDAN--WVLSINRHANELPPVSPD--VDGVLLLVGEDFLFDARCYFPNAK 80 Query: 80 IVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRFAFYGLPESSGKRWATER 139 V + G Y E D+ + A +L E G +G + R Sbjct: 81 SVDLRGIY---EPRMVDGITMIDHEKVGCVAADYLYEIGRRNVLAFGGNPNLEFRAQIGS 137 Query: 140 EYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQTLPPQTGIIAVTDARARHIL 199 + + + Q E + + ++ ++ L G+ + D A + Sbjct: 138 FIKRSKAIGSKAAAIYTNQWAEGTATDHANLTEKIRRTIEELGLPLGVFSPDDMMADSFM 197 Query: 200 QVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKE-E 258 Q+ L VP ++ V+G++N+ + RV LSS+ ++GY A+LL RL+ + + Sbjct: 198 QIALGLGYSVPAQIAVLGMNNDRGFCEMCRVPLSSLDVNLSRLGYDGARLLDRLMRGQIQ 257 Query: 259 MPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNL 318 PL R++VPP+ V R+STD+ D V+ + YIR+H + + V+ +L + SR+ Sbjct: 258 EPLPRVIVPPLTVETRQSTDHTRCDDRLVVAILEYIRDHFAEHMTVEDMLRDLHTSRAVA 317 Query: 319 EKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDT 378 +RF++ +G I I ++ AR LL+ + I+ +++M GY + F FK + Sbjct: 318 YERFQKHIGHPIGEEIERVRMNYARGLLVGSDYKIDVVARMSGYQNTASFGRAFKTRFGE 377 Query: 379 TPKEYRDVNSE 389 TP R E Sbjct: 378 TPNAARRRGQE 388 >UniRef50_C0AC48 Transcriptional regulators-like protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0AC48_9BACT Length = 371 Score = 207 bits (527), Expect = 6e-52, Method: Composition-based stats. Identities = 85/373 (22%), Positives = 167/373 (44%), Gaps = 18/373 (4%) Query: 19 DRQVVEGVGEYLQASQSEWDIFIEEDFRARIDKIKDWL---GDGVIADFDDKQIEQALAD 75 R+V GV + + + D+ +++ AR+ DGV+ D + + A Sbjct: 5 GRRVWNGVVAFARDRR---DVIVQQWSLARLADPGFMAASGCDGVV-MIDGRAGDFARLP 60 Query: 76 VDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRFAFYGLPESSGKRW 135 +P V A + + D L E A + +G A+ G P G Sbjct: 61 QGLPAVTTSAYLKSA----GIPRVCDDQRWLGELAAGYFTRRGFQTVAYCGYPFHHG--- 113 Query: 136 ATEREYAFRQLVAEEKYRGVVYQ----GLETAPENWQHAQNRLADWLQTLPPQTGIIAVT 191 + R F + + R +VY+ E N Q RL WL+ LP ++A + Sbjct: 114 SQLRGAGFAEAAGAARARVLVYEVKGSPEEDVAFNSAREQRRLRAWLRRLPKPCALLAFS 173 Query: 192 DARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLH 251 D A ++Q+ + +PE + ++GIDN+ L + + LSS+ G+ + G +AA+++ Sbjct: 174 DTLAGLVMQLALDEGLRLPEHVALLGIDNDMLLQRALPLGLSSIEIGSEKTGKKAAEVVL 233 Query: 252 RLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAV 311 + P LV R++ R++TD D + QA+ +I H V ++ + Sbjct: 234 NWIRDGTAPAAETLVRHARLVPRQTTDRHYTEDDFIAQALDFIHEHKTSAPTVTEIAAHM 293 Query: 312 GISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSV 371 G +R +E+RF+ +G + H ++ +LE+ ++ L+ + + ++ CG+ + ++ + Sbjct: 294 GCTRRTVERRFRAALGNSAHQVMQELRLERTQAYLLESQAPLKAVALACGFSNDRHLCTA 353 Query: 372 FKKAYDTTPKEYR 384 F++ + TP +R Sbjct: 354 FRQRFGMTPGGFR 366 >UniRef50_Q21A44 Two component transcriptional regulator, AraC family n=2 Tax=Alphaproteobacteria RepID=Q21A44_RHOPB Length = 359 Score = 181 bits (460), Expect = 4e-44, Method: Composition-based stats. Identities = 76/343 (22%), Positives = 127/343 (37%), Gaps = 40/343 (11%) Query: 53 KDWLGDGVIADFDDKQIEQALADVDVPIV-GVGGSYHLAESYPPVHYIATDNYALVESA- 110 + G +A D ++ L D+++PI+ G+ HL E + + T Y E Sbjct: 33 EARTGAEAVALIDSCDVDLMLVDINIPIITGLDVIRHLREGHVDTKVVVTTAYDYFEMTR 92 Query: 111 -FLHLKEKGVNRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQH 169 +HLK Y L + + E +QL A+ K R +V + E A +N Sbjct: 93 EAIHLK------VDEYLLKPVRTQALVSTLETCIQQLGADRKCRVMVARLGELADQN--- 143 Query: 170 AQNRLADWLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSR 229 Q G+ V RH+ +C P + + T L+ Sbjct: 144 ------------AYQDGVALVR----RHVEWICTQRDYPCRD------VAQNSATALLAL 181 Query: 230 VALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPA--- 286 + + A R + ++ LQ +L + + + D A Sbjct: 182 IRAKGLRVSA---ALARQVTELRTMSLDDRGLQSVLGVFLGLADLLFDVREEQLDEAGST 238 Query: 287 VIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLL 346 V +A++YI + K + ++ D IS L + FK+ + + ++E A+ LL Sbjct: 239 VQKAINYIERNLSKRVTLEDAADYAKISACYLSRMFKKTLDVNFVTYLTTRRMELAKELL 298 Query: 347 ISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSE 389 T SI I++ Y L YF FKK +P EYR E Sbjct: 299 AGTERSITNIAKEFSYNDLNYFCKSFKKEIGVSPSEYRRQARE 341 >UniRef50_B0ABU8 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ABU8_9CLOT Length = 412 Score = 167 bits (422), Expect = 8e-40, Method: Composition-based stats. Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 1/165 (0%) Query: 222 ELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRS 281 EL LSR ++ A + + L K L ++ + + ++ Sbjct: 246 ELCTLLSRASIDGGADSNTIIDLNSKFLYKISNIKNIEDLSYWVIHMLDSFTQNVFNFNE 305 Query: 282 LTDPA-VIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLE 340 +P + + + YI H + I ++ + + V ++ S FK+EVG + ++ ++E Sbjct: 306 SKNPVLIQKCISYINEHYNEDINLETIANIVHLNPSYFSSIFKKEVGVSFSNYLNKIRIE 365 Query: 341 KARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRD 385 +++ LL +T SI EI+ G+ YF VFK TPK+YR Sbjct: 366 QSKLLLKNTDSSIVEIALEVGFEDQSYFSKVFKNLTKMTPKQYRQ 410 >UniRef50_A4XHB8 Two component transcriptional regulator, AraC family n=2 Tax=Clostridia RepID=A4XHB8_CALS8 Length = 546 Score = 163 bits (413), Expect = 9e-39, Method: Composition-based stats. Identities = 40/158 (25%), Positives = 78/158 (49%), Gaps = 3/158 (1%) Query: 232 LSSVAQGARQMGYQAAKLLHRLLDKEEMP-LQRIL-VPPVRVIERRSTDYRSLTDPAVIQ 289 LSS +Q ++ Q + L +L + + L +L + + IE +S + + Sbjct: 379 LSSSSQYEQEDKLQDIEFLSEILKCKSISELNGVLKMSIQKTIEEVQKHNQSKMGSLIKK 438 Query: 290 AMHYIRNHAC-KGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLIS 348 + YI+ + I + ++ + +S S L + FK+E G+ + I+ ++EKA+ LL + Sbjct: 439 VIEYIKANYSYNEISLSEISEKFFVSPSYLSRLFKKETGKNLSDFINEYRIEKAKELLAT 498 Query: 349 TTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDV 386 T L E++ G P YF +FK+ +P EY+++ Sbjct: 499 TDLKTYEVADKVGIPDPHYFSRIFKRYTGYSPSEYKEI 536 >UniRef50_A0Q2M6 Transcriptional regulatory protein n=6 Tax=Clostridium RepID=A0Q2M6_CLONN Length = 246 Score = 163 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 41/136 (30%), Positives = 65/136 (47%) Query: 253 LLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVG 312 L + IL ++ ++R + + + YI + I + V D V Sbjct: 110 LKPIRPQKIVDILNEFIKDNKKRIEESNKNCTEEFQEVVEYIDKNFKNDITLKDVADHVN 169 Query: 313 ISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVF 372 S S L K FK+E+G + I +++KA+ +LI++ +SINEI+ GY YF VF Sbjct: 170 FSSSYLSKLFKKEMGINFNRYITKIRIDKAKEILINSNISINEIAFSVGYNEPNYFCKVF 229 Query: 373 KKAYDTTPKEYRDVNS 388 KK + TP EYR + Sbjct: 230 KKIVNMTPSEYRTNSR 245 >UniRef50_UPI0001B9ECE6 two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001B9ECE6 Length = 519 Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 63/271 (23%), Positives = 108/271 (39%), Gaps = 33/271 (12%) Query: 121 RFAFYGLPESSGKRWA--TEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWL 178 A E+S W +ER + + R V + +L+ L Sbjct: 270 HIALATAVEASSYEWLLQSERHIRYEDIEGRTGIRTVC----------SMEEETKLSSLL 319 Query: 179 QTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVA-- 236 ++ G A A +L+ + P + YL + +S+ Sbjct: 320 RS-----GESADLQAWVADLLRRIQSQGQATPGSV----------QAYLHSLIVSAQRWL 364 Query: 237 -QGARQMGYQAAKLLHRLLDKEEM--PLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHY 293 + A +GY + + D E+ +++LV + +I + D S T P V +A+ + Sbjct: 365 IRAATSIGYTSPVKVEETYDIRELTKNPEKVLVDSLGLIMKEYRDMVSTTSP-VQRAISF 423 Query: 294 IRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSI 353 I H + + + QV V ++ + + FK+E G+ + KL KA LL T I Sbjct: 424 IHEHLGQSLSLQQVAKHVHMNPNYFSEMFKKETGQNYIEFVTQAKLRKAMHLLRETPAKI 483 Query: 354 NEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 +EI+ GY ++YF +FKK TP EYR Sbjct: 484 SEIANEIGYEDIKYFNRLFKKWTGLTPSEYR 514 >UniRef50_C6CRZ9 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CRZ9_PAESJ Length = 501 Score = 161 bits (407), Expect = 4e-38, Method: Composition-based stats. Identities = 47/150 (31%), Positives = 73/150 (48%), Gaps = 5/150 (3%) Query: 243 GYQAAKLLHRLLDKE-EMPLQRILVPPVRVIERRSTDYRSLTDPAV---IQAMHYIRNHA 298 G A LL + M L+ + E R ++ +P V QA+ YI H Sbjct: 352 GKSAESLLQTIDQLPGSMELKSWFKAACQDFETRLDRWKQQANPYVNSIQQAIDYIEEHY 411 Query: 299 -CKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEIS 357 + + QV + + ++ S L FK+E GET ++ KL+KA+ LL +T + I+EI Sbjct: 412 LDSDLSIKQVAENIHLNPSYLSTLFKKETGETFTGYVNKLKLQKAQVLLRNTDMKISEIC 471 Query: 358 QMCGYPSLQYFYSVFKKAYDTTPKEYRDVN 387 Q G+ YF SVFKK + +P E+R + Sbjct: 472 QTVGFEDSTYFSSVFKKHFQISPSEFRQNH 501 >UniRef50_C9RVZ3 Two component transcriptional regulator, AraC family n=4 Tax=Geobacillus RepID=C9RVZ3_GEOSY Length = 513 Score = 160 bits (406), Expect = 6e-38, Method: Composition-based stats. Identities = 44/179 (24%), Positives = 69/179 (38%), Gaps = 16/179 (8%) Query: 224 TRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRI----------------LVP 267 Y+ +A S A + + L RLL + + +R+ L Sbjct: 331 LTYIEELASSHSLPAAGRKAEETFVWLGRLLSELGIRYERLASFASCRSAAELKRAALDE 390 Query: 268 PVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVG 327 R+ + + +A YI H + + +++V + GIS K FKE G Sbjct: 391 LDRIAADLEVWRQQQAYGKLGKAKDYIDRHYAEPLTLEEVAEQAGISPYYFSKLFKEHFG 450 Query: 328 ETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDV 386 T + ++E+A+ L T S+ EI GY YF VFKK +P EYR Sbjct: 451 ITFIDYVTNVRIERAKEALAETDQSLKEICFSVGYNDPNYFSRVFKKQTGLSPSEYRKK 509 >UniRef50_C6QRS7 Two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y4.1MC1 RepID=C6QRS7_9BACI Length = 269 Score = 160 bits (405), Expect = 8e-38, Method: Composition-based stats. Identities = 39/111 (35%), Positives = 60/111 (54%), Gaps = 1/111 (0%) Query: 280 RSLTDPAVIQ-AMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEK 338 S+ D VIQ A++YI + GI +++V + V IS L K FK+E+ + + +K Sbjct: 142 NSIQDGKVIQSALNYIEENYQNGITLEEVAEHVHISPFYLSKLFKKELKMNFVSYVTEKK 201 Query: 339 LEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSE 389 ++KA+ LL +T L + I+ Y YF VFKK TP EYR + + Sbjct: 202 MQKAKELLENTDLPVIHIALELNYQEPNYFSKVFKKVVGITPSEYRKRSKK 252 >UniRef50_C5D8H7 Two component transcriptional regulator, AraC family n=3 Tax=Geobacillus RepID=C5D8H7_GEOSW Length = 515 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 39/166 (23%), Positives = 62/166 (37%), Gaps = 7/166 (4%) Query: 221 EELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYR 280 EE L R+ R + + L L LQ ++ Sbjct: 352 EETFILLGRMLTDFGISYERTTTFHSCGSLEELKRTATEQLQ-------HMVHYIQAWRH 404 Query: 281 SLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLE 340 + + +A YI H + +++V + VGIS K FK+ G T + ++ Sbjct: 405 QQANGKIGKAKDYIDEHYHHPLTLEEVAEYVGISPYYFSKLFKDRFGMTFIDYVTEVRIA 464 Query: 341 KARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDV 386 +A+ + S+ EI + GY YF VFKK +P EYR Sbjct: 465 RAKKEMADPNKSLKEICFLVGYNDPNYFSRVFKKHTGMSPTEYRKK 510 >UniRef50_B9MLQ2 Two component transcriptional regulator, AraC family n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MLQ2_ANATD Length = 519 Score = 158 bits (399), Expect = 4e-37, Method: Composition-based stats. Identities = 27/109 (24%), Positives = 52/109 (47%) Query: 282 LTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEK 341 + + ++ +A+ +I + + I + Q+ + K FK+ G + + +++K Sbjct: 408 INNDSINKAIEFINQNYSEEITLSQISSTFNFNPYYFSKLFKKYTGVSFKTYLTKLRIQK 467 Query: 342 ARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSEV 390 A LL +T+ SI EIS G+ YF FKK TP +R + ++ Sbjct: 468 ACQLLKNTSKSIKEISFAVGFSDPNYFIKAFKKFTGMTPSAFRSSSVDI 516 >UniRef50_UPI00016C020E hypothetical protein Epulo_10707 n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C020E Length = 420 Score = 157 bits (398), Expect = 6e-37, Method: Composition-based stats. Identities = 53/261 (20%), Positives = 116/261 (44%), Gaps = 23/261 (8%) Query: 129 ESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQTLPPQTGII 188 + +R +R+ + + E+KY ++ + P + +L + +++ Sbjct: 177 KERNERALQQRK--ISETLQEKKY---LHNADYSYP---FEKEKKLVEAVKSGQTADAAA 228 Query: 189 AVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAK 248 + D +L L+I + ++ EL +SRVAL S + + A Sbjct: 229 ILNDLLGHVLLSNANDLNI-IKARVL-------ELCTIISRVALESTKRIENTLSLNAV- 279 Query: 249 LLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPA----VIQAMHYIRNHACKGIKV 304 L+ L+ E L+ + +VI+ + + L + A + + ++YI + + I + Sbjct: 280 FLNELM--ESKSLEDLAFALHKVIKEFTDEILELNNTALFVPIRKVINYINTYYAEEISL 337 Query: 305 DQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPS 364 +V V ++ S FK+E G + ++ ++E + LL+ T++++ E++ G+ + Sbjct: 338 HKVAKLVHLTPSYFSTVFKKETGYSFTQYLNKVRIEHGKLLLMDTSMTVLEVAIEVGFDT 397 Query: 365 LQYFYSVFKKAYDTTPKEYRD 385 YF +VFKK TP ++R Sbjct: 398 DTYFCTVFKKVVGVTPNQFRK 418 >UniRef50_A4XJL7 Transcriptional regulator, AraC family n=2 Tax=Clostridia RepID=A4XJL7_CALS8 Length = 291 Score = 157 bits (398), Expect = 6e-37, Method: Composition-based stats. Identities = 35/125 (28%), Positives = 65/125 (52%), Gaps = 2/125 (1%) Query: 261 LQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEK 320 L + + +++ SL+ + + + YI+NH + I +D + V +S + L Sbjct: 155 LDMMHIVAKYILDSEMIRISSLSS--IEKIIEYIKNHYMEDITLDDLAKMVYLSPTYLSY 212 Query: 321 RFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTP 380 FK+++G T + +L+K++ L+ +T LSI EIS+M G YF +FKK + +P Sbjct: 213 LFKKQLGITFKEYLINIRLKKSKELIETTDLSIGEISKMVGIEDQNYFSRLFKKKFGVSP 272 Query: 381 KEYRD 385 Y+ Sbjct: 273 LNYKK 277 >UniRef50_C6LLK3 Putative two-component response regulator n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LLK3_9FIRM Length = 531 Score = 157 bits (397), Expect = 7e-37, Method: Composition-based stats. Identities = 41/139 (29%), Positives = 63/139 (45%), Gaps = 2/139 (1%) Query: 249 LLHRLLDKEEMPLQRI--LVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQ 306 L ++ E+ R L ++ ++ V +A Y++ + + I +D Sbjct: 389 YLDTVMALEDYEDIRTWFLEKMMQTCCSIRDKNEDRSESLVEKARSYMQENYSREISLDD 448 Query: 307 VLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQ 366 V V +S K FKEE GE + ++ KA+ LL + LSI EI M GY Sbjct: 449 VSKEVNVSPYYFSKIFKEESGENFTEYLTNIRIGKAKELLENPELSIKEIGVMSGYTDPN 508 Query: 367 YFYSVFKKAYDTTPKEYRD 385 YF +FKK TP+EYR+ Sbjct: 509 YFSRIFKKHTGITPREYRE 527 >UniRef50_C6JEP4 Two component transcriptional regulator n=3 Tax=Clostridiales RepID=C6JEP4_9FIRM Length = 531 Score = 157 bits (397), Expect = 7e-37, Method: Composition-based stats. Identities = 36/121 (29%), Positives = 52/121 (42%) Query: 265 LVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKE 324 L + + + +A YI + + I +D V V IS K FK+ Sbjct: 408 LDKTREICTKLENSKEKEAGSIIDRAKEYINENFRRDISLDDVSREVDISPYYFSKLFKQ 467 Query: 325 EVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 E G+ + +L+ AR LL + LSI EI GY YF +FKK TP E+R Sbjct: 468 ETGKNFIEYLTEIRLKNARELLQDSRLSIKEICAQSGYSDPNYFSRIFKKYEGVTPSEFR 527 Query: 385 D 385 + Sbjct: 528 E 528 >UniRef50_A4XFU2 Two component transcriptional regulator, AraC family n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XFU2_CALS8 Length = 508 Score = 157 bits (397), Expect = 7e-37, Method: Composition-based stats. Identities = 35/145 (24%), Positives = 71/145 (48%), Gaps = 1/145 (0%) Query: 246 AAKLLHRLLDKEEMPLQRILVPPVRV-IERRSTDYRSLTDPAVIQAMHYIRNHACKGIKV 304 A + L +E +++ L+ V I++ S + A+ YI + I + Sbjct: 364 AKSMAFSLNMQESNNIEKSLIEFVHYCIDKIQNVKESRHKKIIKDAITYIERNYANQIFL 423 Query: 305 DQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPS 364 + + G+S + K FKEE G++ ++ ++ KA+ LL+ST L E+++ G+ Sbjct: 424 SDIAEVCGVSPNYFCKIFKEETGKSFVDFLNELRINKAKELLLSTNLKSYEVAEKVGFND 483 Query: 365 LQYFYSVFKKAYDTTPKEYRDVNSE 389 +YF +FKK T+P ++++ + Sbjct: 484 YKYFSMIFKKYTGTSPSKFKEERQK 508 >UniRef50_C7G788 Transcriptional regulator, AraC family n=2 Tax=Bacteria RepID=C7G788_9FIRM Length = 292 Score = 157 bits (397), Expect = 7e-37, Method: Composition-based stats. Identities = 43/183 (23%), Positives = 76/183 (41%), Gaps = 7/183 (3%) Query: 210 PEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQ------- 262 P +L I + E Y + + + ++ E P Sbjct: 108 PWELLWIHFNGPEARAYYTYFRDHHNWHFRSAHFTELINAIESIIRYNEEPTDDTDLLTA 167 Query: 263 RILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRF 322 + ++ + +I S + L + +HY+ H + I +DQ+ + IS+ L + F Sbjct: 168 QQIIHILTLICTESNEKNELLSDKLKTILHYLDEHYTENISLDQLAEQFFISKYYLSREF 227 Query: 323 KEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKE 382 K+E G T+ + A+++ A+ LL + SI EI+ +CG YF VF+K T E Sbjct: 228 KKEFGTTVIQYVLAKRINNAKELLRYSNSSIEEIAHLCGIDDASYFNKVFRKMEGCTASE 287 Query: 383 YRD 385 YR Sbjct: 288 YRK 290 >UniRef50_A6NS86 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NS86_9BACE Length = 425 Score = 157 bits (396), Expect = 9e-37, Method: Composition-based stats. Identities = 56/239 (23%), Positives = 104/239 (43%), Gaps = 18/239 (7%) Query: 153 RGVVYQGLETAPENWQHAQNRLADWLQTLPPQTGIIAVTDARARHIL-QVCEHLHIPVPE 211 Q L+ A E+ ++ ++ + ++ + AR +L ++ E++ E Sbjct: 181 ECTHIQPLKAAGESGRYPMDKERELVR------AVKEGDQTTARQLLRELLEYIQSATGE 234 Query: 212 KLCVIGIDNEELTRYLSRVAL--SSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPV 269 C++ EL LSR A+ M + L EE+ L Sbjct: 235 DFCLMRSRALELMAVLSRAAVDGGGDQDTILDMNSRCFSESDHLRTAEELALW-----LT 289 Query: 270 RVIERRSTDYRSLTD----PAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEE 325 R+ +R + SL + + +A+ Y++ + + ++ VG+S S + FKEE Sbjct: 290 RMTDRFTDTVFSLVEVKHRDIICKAIEYLKRNCRDRVTLEDTAGHVGLSPSYFSRVFKEE 349 Query: 326 VGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 VGE+ ++ + A ++ + R++L+ T SI EI CG+ YF VF+K TP +R Sbjct: 350 VGESFNSYLTALRISRGRAMLLDTDASIAEICDRCGFDDQSYFTKVFRKYTGVTPGRFR 408 >UniRef50_C1P7P5 Transcriptional regulator, AraC family n=1 Tax=Bacillus coagulans 36D1 RepID=C1P7P5_BACCO Length = 292 Score = 157 bits (396), Expect = 9e-37, Method: Composition-based stats. Identities = 41/171 (23%), Positives = 79/171 (46%), Gaps = 9/171 (5%) Query: 219 DNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTD 278 D L +L ++ A +G + L +L++E P + Sbjct: 129 DFAAAYSKLPVFSLEKLSASAEVLGTLSEYYLSSVLNEEAKPAKE---------STAQVK 179 Query: 279 YRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEK 338 + + + QA+ YI+ H + + +++V V +S K FK+E GET + ++ +K Sbjct: 180 KHASSKKEIKQALQYIQKHIHQPVTLEEVAGHVYLSPYYFSKLFKKETGETFVSFVNRQK 239 Query: 339 LEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSE 389 + A+ +L + L ++ I+ G+ + YF VFK+ Y TTP YR ++ + Sbjct: 240 MNLAKDMLANDDLPVSYIAHSLGFREISYFSKVFKRYYQTTPTSYRAMSRK 290 >UniRef50_C4Z204 AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR n=2 Tax=Clostridiales RepID=C4Z204_EUBE2 Length = 277 Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats. Identities = 40/192 (20%), Positives = 76/192 (39%), Gaps = 17/192 (8%) Query: 195 ARHILQVCEHLHI-PVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRL 253 + +++ C + +PEK + + L ++ + + + L+ L Sbjct: 98 GKELMENCMKPGVVNIPEKRR------DYVVALLDKLIFENDSPDELSPAFIKVGLIELL 151 Query: 254 LDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGI 313 L + + E + + + + YI H + ++ V D + Sbjct: 152 L----------FIIRCKNYEENVIKEIDVDNRIIQEVATYIYEHYADNLSLEYVADKFNL 201 Query: 314 SRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFK 373 SRS L K+FK G I +++ A +LL+ T SI +I+ CG+ YF F+ Sbjct: 202 SRSYLSKKFKTATGFGFKEYIINVRIQNACNLLLETNKSITDIAFECGFNDSNYFGDAFR 261 Query: 374 KAYDTTPKEYRD 385 KA +P +YR Sbjct: 262 KAKGISPHKYRK 273 >UniRef50_C4Z3B2 Two-component system, response regulator YesN n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z3B2_EUBE2 Length = 514 Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats. Identities = 38/140 (27%), Positives = 72/140 (51%), Gaps = 1/140 (0%) Query: 248 KLLHRLLDKEEMP-LQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQ 306 + + RL E+ + I+ + ++E+ + + + +YI NH + I Q Sbjct: 371 REIDRLYKSEDFSCIMDIVNNYIDLLEKSFGKEPATSHREIETVKNYIHNHYGEEIGAQQ 430 Query: 307 VLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQ 366 + D V ++ S L FK+E G+ + I ++EKA+ LL T + I IS+ GYP++ Sbjct: 431 LADMVYLAPSYLSSLFKKETGQNLSKYIKQYRMEKAKELLTGTNMKIVNISEQVGYPNVS 490 Query: 367 YFYSVFKKAYDTTPKEYRDV 386 YF F++ + +P+++RD Sbjct: 491 YFVQSFREYFGISPQKFRDQ 510 >UniRef50_B8I425 Two component transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=B8I425_CLOCE Length = 538 Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats. Identities = 37/161 (22%), Positives = 80/161 (49%), Gaps = 5/161 (3%) Query: 229 RVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAV- 287 R+++SSV + + L +L++K + + + V R ++ S + ++ Sbjct: 376 RISVSSVDTEKKYSEGEDIASLIKLIEKTDKA-EELNSLLEEVAVRIASKVNSFNNKSIK 434 Query: 288 ---IQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARS 344 +A+ YI+ H + + +++V + + +S + + FK+E+G++ ++ +++KA+ Sbjct: 435 LILRKAIDYIQEHYNEQVTLNEVAENIYVSTFYISRMFKKELGKSFVDYLNDVRIDKAKE 494 Query: 345 LLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRD 385 LL E+++ G YF +FKK TP EYRD Sbjct: 495 LLKDVRYKTYEVAEKVGISDPHYFSKLFKKYSGMTPSEYRD 535 >UniRef50_C0BFD5 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C0BFD5_9FIRM Length = 305 Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats. Identities = 41/191 (21%), Positives = 81/191 (42%), Gaps = 11/191 (5%) Query: 210 PEKLCVIGIDNEELTRYLSRVALSSVAQGAR-QMGYQAAKLLHRLLDKEEMPLQRILVP- 267 P +G E R++ + L+S + G + +++ +L + + Sbjct: 85 PWSYLWVGFGGTEAQRFVRDLGLNSRQLTCECEYGEELKEIVFEMLHHTCSTAENLYYLQ 144 Query: 268 ---------PVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNL 318 R IE + + V +A+ YI+N+ + I V+ + + + ++RS L Sbjct: 145 GKLYQFFSVLARGIEIQQYSNDTKESIHVQEAIAYIKNYYSQKITVEDIANYLALNRSYL 204 Query: 319 EKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDT 378 F +G + + ++ + + L T LS+ EI+ CGY + F VFK+ Sbjct: 205 YTIFMNSLGISPKEFLTEFRISRGKEQLALTDLSVEEIAVSCGYRNSLAFGKVFKQKMGM 264 Query: 379 TPKEYRDVNSE 389 TP +YR+ N + Sbjct: 265 TPTQYRNDNRK 275 >UniRef50_B0K234 Response regulator receiver protein n=8 Tax=Thermoanaerobacteraceae RepID=B0K234_THEPX Length = 537 Score = 154 bits (390), Expect = 4e-36, Method: Composition-based stats. Identities = 35/116 (30%), Positives = 55/116 (47%) Query: 271 VIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETI 330 + E T + D + + + +I ++ K I +D V V +S K FK++ G+ Sbjct: 411 LFENIKTINKEKMDTFIAKIIRFIEDNFNKDITLDDVAKEVNMSYHYFSKFFKDQTGKNF 470 Query: 331 HAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDV 386 + ++ KA+ LL T+SI E+ GY YF +FKKA TP EYR Sbjct: 471 IDYLTNLRVTKAKELLEDETVSIKEVCYKVGYSDPNYFSKIFKKATGMTPTEYRSA 526 >UniRef50_C6IWJ9 Transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IWJ9_9BACL Length = 284 Score = 154 bits (390), Expect = 4e-36, Method: Composition-based stats. Identities = 44/190 (23%), Positives = 80/190 (42%), Gaps = 13/190 (6%) Query: 210 PEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEE------MPLQR 263 P IG + E++ LSR L+ + + +L L + EE + LQ Sbjct: 87 PWTYSWIGFNGEQVAEILSRTRLTPASPVLPMDTHLMPQLYELLNEAEESNTTRDLRLQT 146 Query: 264 ILVPPVRVIER-------RSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRS 316 +L + ++ + D + + + ++ +H + + V Q+ VG+ R Sbjct: 147 LLYEFMTLLVELVPASGDADSTRTQAKDAYIHRCLDFLHSHYSEEMSVGQLAAIVGLDRK 206 Query: 317 NLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAY 376 L FK G + ++EKA +LL + SI E+++ GY F +FKK Sbjct: 207 YLSSLFKRATGMPPQQYLLKYRMEKACALLRNGHYSIAEVARSVGYQDALLFSKMFKKTV 266 Query: 377 DTTPKEYRDV 386 T+P +YR+ Sbjct: 267 GTSPSDYREQ 276 >UniRef50_C5EHL9 Predicted protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EHL9_9FIRM Length = 254 Score = 154 bits (390), Expect = 5e-36, Method: Composition-based stats. Identities = 49/253 (19%), Positives = 101/253 (39%), Gaps = 17/253 (6%) Query: 139 REYAFRQLVAEEKYR-GVVYQGLETAPENWQHAQNRLADWLQTLPPQTGIIAVTDARAR- 196 R + L A + ++ V++ +A + + +P +G+ + R R Sbjct: 13 RNGLLKLLGARDGWQVTGVFEDALSALTALYDNEADVIVTDIKMPEVSGLELIRQIRERN 72 Query: 197 ---HILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRL 253 HI+ + H + +K +G+ L R ++ + +++ A + Sbjct: 73 QDIHIVILSGHSNFAYAQKAIELGVTRYLLKPTNPRELVAVLEGIEKELKQGAGDAPDKK 132 Query: 254 LDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGI 313 PP D + + V +A+ Y+ H I + + + + + Sbjct: 133 Q------------PPQEGEAGSGADGDGVGNLLVQKAIQYVEVHYGGRITLKDMSEELHL 180 Query: 314 SRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFK 373 S + L + FK G+ + + ++ KAR+ L ++++++M GY +YF S FK Sbjct: 181 SPNYLCELFKRHTGKNLMEYVTEYRMMKARNYLNHVEYKVSDVAEMVGYKEAKYFSSTFK 240 Query: 374 KAYDTTPKEYRDV 386 K Y TP EYR+ Sbjct: 241 KMYGMTPLEYRNK 253 >UniRef50_C6D127 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D127_PAESJ Length = 534 Score = 154 bits (389), Expect = 5e-36, Method: Composition-based stats. Identities = 33/108 (30%), Positives = 63/108 (58%) Query: 283 TDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKA 342 +D V +++ YI+ + + I + V VG++ + L + FK+E G+ + + K+ +A Sbjct: 426 SDSVVQKSVQYIKENVEEDISREDVAAHVGLNPAYLSRLFKKETGQNLIDYLIETKMARA 485 Query: 343 RSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSEV 390 R LL +T ++++ I+Q GY + +F +FKK Y P+EYR+V + Sbjct: 486 RQLLDTTGMTVSAIAQQVGYSNFSHFTKMFKKQYGINPQEYRNVTKRL 533 >UniRef50_C3WEF1 Putative uncharacterized protein n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WEF1_FUSMR Length = 285 Score = 154 bits (389), Expect = 6e-36, Method: Composition-based stats. Identities = 51/197 (25%), Positives = 85/197 (43%), Gaps = 11/197 (5%) Query: 204 HLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGY-QAAKLLHRLLDK------ 256 P K IG D E +YL + + R + LL +L + Sbjct: 74 QADAKNPWKYFWIGFDGEGAEKYLRELGIIQHKPIFRTDKLDELFSLLKEMLKRKNLTLA 133 Query: 257 EEMPLQRILVPPVRVIERRSTDYRSLT----DPAVIQAMHYIRNHACKGIKVDQVLDAVG 312 EE+ LQ + +I ++ +P V + + YI+N+ I V+ +++ VG Sbjct: 134 EELKLQGLFYEFFSLIVEENSIEEKDEKNELNPYVDKIITYIKNNYWDDINVNNIIEYVG 193 Query: 313 ISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVF 372 ++RS L FK+ +G TI + +L +A LL T SI ++ CGY F + Sbjct: 194 LNRSYLSTLFKKNMGITIQEYLTVFRLSRANELLDITNESIENVANSCGYKDPLVFTKAY 253 Query: 373 KKAYDTTPKEYRDVNSE 389 KK Y TP ++R + + Sbjct: 254 KKKYGVTPTQHRKKDRK 270 >UniRef50_UPI0001788F54 two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788F54 Length = 523 Score = 154 bits (389), Expect = 6e-36, Method: Composition-based stats. Identities = 37/121 (30%), Positives = 59/121 (48%) Query: 269 VRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGE 328 +R ER + + +P + + + YI++H I + V + S L F GE Sbjct: 398 IREAERAIGETNTSVNPNMDRLLEYIQDHYADPITLTGVARQFHFNASYLSSYFASYNGE 457 Query: 329 TIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNS 388 ++ +LEKA LL++T L+I+EIS GY YF VFKK +P ++R N+ Sbjct: 458 GFSEYLNKIRLEKAMELLLTTELTISEISASVGYSDQSYFTKVFKKQTGISPSQFRRQNA 517 Query: 389 E 389 Sbjct: 518 R 518 >UniRef50_Q2RGN4 Two component transcriptional regulator, AraC family n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RGN4_MOOTA Length = 548 Score = 153 bits (387), Expect = 9e-36, Method: Composition-based stats. Identities = 62/260 (23%), Positives = 104/260 (40%), Gaps = 14/260 (5%) Query: 138 EREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQTLPPQ---TGI-IAVTDA 193 E ++ + VA ++R + Y G + + A+ +L Q I + A Sbjct: 286 ELARSYAEAVAAAEFR-LFYGGDQVIHADDVIARPSAGQFLPAPEEQELTQAIRMGDRQA 344 Query: 194 RARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAK----- 248 R + L + ++ ++ + EL +R AL A A Sbjct: 345 AYRQAKNILMQLLLEQEKRPAILKMKLLELNTLAARAALEGGADPEAVSDLALASSTEFL 404 Query: 249 LLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVL 308 L L D E L+R++ +V E R SL D +A YI + + + +++V Sbjct: 405 TLDNLADMRERILERLMALVAQVAETREQRNSSLID----RASKYIEANFSQDLTLEEVA 460 Query: 309 DAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYF 368 V +S K FK+ G + +L+ AR LL++T L + EI+ GY +YF Sbjct: 461 RQVYLSPCYFSKLFKQFKGLNFIDYLTKVRLKAARELLLNTKLPVAEIATRVGYRDARYF 520 Query: 369 YSVFKKAYDTTPKEYRDVNS 388 VFKK TP +R + Sbjct: 521 GQVFKKQEGYTPSVFRKIGG 540 >UniRef50_B9XAQ1 Transcriptional regulator, AraC family n=2 Tax=Verrucomicrobia RepID=B9XAQ1_9BACT Length = 326 Score = 153 bits (387), Expect = 9e-36, Method: Composition-based stats. Identities = 37/154 (24%), Positives = 71/154 (46%), Gaps = 1/154 (0%) Query: 234 SVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVI-ERRSTDYRSLTDPAVIQAMH 292 V + + Y K++ + + L I + ++ R+ P + +A Sbjct: 170 EVDKDRLRQAYFDTKVVSTRQHEAIVSLLEIFAQHISLVSNWVLVQERNAEPPVIARAKR 229 Query: 293 YIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLS 352 YI ++ + + + +V AV S K FK+ G + ++EKA++LL++ L Sbjct: 230 YIEDNQAEDLTLSEVAKAVNTSTFYFCKMFKKATGLHFTEYVSRVRIEKAKNLLLNPNLR 289 Query: 353 INEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDV 386 ++E++ G+ SL +F VFKK +P EYR+ Sbjct: 290 VSEVAFEVGFQSLTHFNRVFKKIVGQSPTEYREQ 323 >UniRef50_UPI0001788A43 two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788A43 Length = 516 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 62/268 (23%), Positives = 111/268 (41%), Gaps = 18/268 (6%) Query: 130 SSGKRWATEREYAFRQLVAEEKYRGVVYQGL------ETAPENWQHAQNRLADWLQTL-- 181 S + + AFR+ A E G+ + E P AQ R A L L Sbjct: 259 SRRYNSMDKLQEAFRE--AAESLEGLFFHPDQQILRAEELPLTADSAQERPAAELHALRA 316 Query: 182 PPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQ 241 G + ++ R + I+Q + P V+ E LS +A+ + G Sbjct: 317 ALTVGNMDISQERLQSIMQSWRPGRMKKP---AVL----REAEELLSLLAMFHLPGGPPL 369 Query: 242 MGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKG 301 + L + + +++ LQ R +L + V+QA+ YI+ + Sbjct: 370 PQIREVGKLRSVEEVKKLVLQG-FHALREEAMRHPVPESTLHERIVLQAVRYIKARFTEP 428 Query: 302 IKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCG 361 I + +V D V +SR+ + FK G + +L++A+ LL +T+L + E++ G Sbjct: 429 ISLQEVADEVAVSRNYFSELFKRVTGHNFIDYVIDLRLKRAKELLSTTSLRVYEVADRSG 488 Query: 362 YPSLQYFYSVFKKAYDTTPKEYRDVNSE 389 + ++YF +FKK TP EY+ + + Sbjct: 489 FNDVKYFSKLFKKMVGMTPAEYQGQHRK 516 >UniRef50_C6LLM9 Two-component response regulator n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LLM9_9FIRM Length = 516 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 53/269 (19%), Positives = 103/269 (38%), Gaps = 38/269 (14%) Query: 124 FYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQTLPP 183 FY + +RW+ E F + + + LE + A+ +L + Sbjct: 269 FYRTKKQQIQRWSGEEMVPFTIDLLQNHVESELCALLEQRKA--EEAEEKLRGQM----- 321 Query: 184 QTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQG----- 238 AR ++ +P+ + + L R+A++ + Sbjct: 322 --------TWCARKMI---------IPQDVA-------RYFQGLLRLAIAQMRTDGFLPP 357 Query: 239 -ARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNH 297 + + ++ EE+ L+++ V + + + V + YI+ H Sbjct: 358 VLDDILNEQIFSVNDCSSSEEL-LEKVKVILQELTREDQRTGETGSSRIVQEIKRYIQEH 416 Query: 298 ACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEIS 357 + I ++ + D V +S L FK E GE + + ++E A+ L+ L I E++ Sbjct: 417 YAENINLNALADQVYLSPKYLSDLFKRETGENYTSYLLYVRMEHAKKYLMQFDLKIYEVA 476 Query: 358 QMCGYPSLQYFYSVFKKAYDTTPKEYRDV 386 ++ GY S + F VFKK TP EYR+ Sbjct: 477 ELTGYASPKQFIRVFKKEVGVTPGEYRNQ 505 Score = 58.0 bits (139), Expect = 6e-07, Method: Composition-based stats. Identities = 18/130 (13%), Positives = 34/130 (26%), Gaps = 50/130 (38%) Query: 258 EMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSN 317 E L+++ V + + + V + YI+ H + I ++ + D V +S Sbjct: 377 EELLEKVKVILQELTREDQRTGETGSSRIVQEIKRYIQEHYAENINLNALADQVYLSPKY 436 Query: 318 LE--------------------------------------------------KRFKEEVG 327 L + FK+EVG Sbjct: 437 LSDLFKRETGENYTSYLLYVRMEHAKKYLMQFDLKIYEVAELTGYASPKQFIRVFKKEVG 496 Query: 328 ETIHAMIHAE 337 T + Sbjct: 497 VTPGEYRNQV 506 >UniRef50_C0CVY3 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CVY3_9CLOT Length = 529 Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats. Identities = 41/133 (30%), Positives = 61/133 (45%) Query: 253 LLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVG 312 L EE ++ V + + + D + +A YIR + K I +++V VG Sbjct: 391 LAAGEEETARQKFVAAMVELAQAVVIKNQEPDGIITRAQDYIRQNFRKDISLEEVARTVG 450 Query: 313 ISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVF 372 IS K FKEE G + ++E A+ LL LSI ++ GY + YF +F Sbjct: 451 ISPYYFSKLFKEEAGMNFTEYLTGIRIETAKRLLSERELSIKQVCVDSGYANPNYFSRIF 510 Query: 373 KKAYDTTPKEYRD 385 KK TP E+RD Sbjct: 511 KKWVGITPTEFRD 523 >UniRef50_Q2BDI9 Two-component response regulator n=2 Tax=Firmicutes RepID=Q2BDI9_9BACI Length = 525 Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats. Identities = 32/121 (26%), Positives = 52/121 (42%) Query: 267 PPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEV 326 +R++ S + +A YI H + + ++ + V +S K FK+ Sbjct: 405 HLLRIVRHVQAWRNSHAKDMLYKAKEYIEAHYAEALTLESAAEYVDLSPFYFSKLFKDRF 464 Query: 327 GETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDV 386 G T + ++ KA+ L +LS+ EI GY YF VFKK +P EYR Sbjct: 465 GMTFIDFVTDVRIRKAKHFLKEGSLSLKEICYSIGYKDPNYFSRVFKKHTGLSPTEYRKE 524 Query: 387 N 387 + Sbjct: 525 S 525 >UniRef50_C5ETL2 Two component transcriptional regulator n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ETL2_9FIRM Length = 517 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 36/148 (24%), Positives = 66/148 (44%), Gaps = 4/148 (2%) Query: 243 GYQAAKLLHRLLDKEEMPLQRILVPPVR----VIERRSTDYRSLTDPAVIQAMHYIRNHA 298 Y + L E R + R ++ +++ + +A++YIR H Sbjct: 370 AYTQMQNADLLSKCTEAVTLREMEQSYRDGLALLCSPRRMKEDISNYTIKRAINYIREHY 429 Query: 299 CKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQ 358 +GI +++V +GI+ L F E+GE + ++ A+ LL T + + EI++ Sbjct: 430 KEGISLEEVAGRLGITPEYLSTLFNREMGENFSTFLRKFRISHAKRLLKGTDMKVYEIAE 489 Query: 359 MCGYPSLQYFYSVFKKAYDTTPKEYRDV 386 GY +YF VFK+ +P +YR Sbjct: 490 EVGYTDPKYFARVFKEELGISPGDYRQQ 517 >UniRef50_C6D5X4 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D5X4_PAESJ Length = 533 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 51/248 (20%), Positives = 95/248 (38%), Gaps = 18/248 (7%) Query: 153 RGVVYQGLETAPENWQHAQNRLADWLQTLPPQTGIIAVTDARARHILQVCE--------- 203 + + L+ + + ++ A W + +G++A+ D A I + Sbjct: 287 KQALCNLLKADEQRFYLSKGETAKWQKGAQHSSGLLAMYDQAAAEIREAIMAKDSDKVRT 346 Query: 204 -----HLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEE 258 HI E+ + + + + L + L A A KL ++ + Sbjct: 347 LAGKWETHIR-KEQYASEEV-RDWVLKLLIDMRLKLHAMLFASQTLTAEKLHKEIVYFDS 404 Query: 259 M--PLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRS 316 + + I R V +A Y+ + K I +++V + ++ S Sbjct: 405 LWGLFEWFHTQLQSYIAAREEALPVSKRREVSEARKYVSMNLGKRISLEEVAAHLHMNPS 464 Query: 317 NLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAY 376 + FK+E G T + +K+E+A+ LL T ++EI +M GY + YF FK Sbjct: 465 YFSRFFKKETGLTFIEYVTDQKIERAKELLDQTNYYVSEICEMLGYDNQSYFIKTFKAQT 524 Query: 377 DTTPKEYR 384 TP EYR Sbjct: 525 GLTPTEYR 532 >UniRef50_C0CGQ4 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CGQ4_9FIRM Length = 535 Score = 152 bits (383), Expect = 3e-35, Method: Composition-based stats. Identities = 35/134 (26%), Positives = 62/134 (46%) Query: 255 DKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGIS 314 +E + + + I + + QA YI +H + I +++V + + I+ Sbjct: 401 SSKEDLISTLKHMIIGEISAFQKLQYTKDSRYISQAKEYIHDHLDQNITLNEVAEMLYIN 460 Query: 315 RSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKK 374 S FK+E GET I ++ +++ LL SI+EIS M GY +YF VF+K Sbjct: 461 PSYFSTLFKKETGETFSNYITQTRIGRSKELLRDLKYSISEISAMVGYQDSKYFSKVFQK 520 Query: 375 AYDTTPKEYRDVNS 388 P ++R + + Sbjct: 521 TVGIKPSKFRKLYT 534 >UniRef50_C6D708 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D708_PAESJ Length = 766 Score = 152 bits (383), Expect = 3e-35, Method: Composition-based stats. Identities = 42/148 (28%), Positives = 69/148 (46%), Gaps = 1/148 (0%) Query: 242 MGYQAAKLLHRLLDKEEMPLQRILVPPV-RVIERRSTDYRSLTDPAVIQAMHYIRNHACK 300 G +AA + +++ L+ R+I+ +TD + A+ Y+ + Sbjct: 611 FGSRAAYADLIARAETLKDMEKCLIEMCDRIIDYHREKRSKMTDVTLQLAIDYMDANFNN 670 Query: 301 GIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMC 360 I VD V + V S S L + FKE +G TI+ + ++ +A LL LSI EI Sbjct: 671 NISVDTVAEYVERSSSYLSRIFKESMGMTINDYLIQLRIRRATELLGQVNLSIEEICHEI 730 Query: 361 GYPSLQYFYSVFKKAYDTTPKEYRDVNS 388 GY ++ YF +FK TP +YR ++ Sbjct: 731 GYANVSYFNKIFKARTGLTPGQYRQQHA 758 >UniRef50_D1PMJ1 Transcriptional regulator, AraC family n=2 Tax=Ruminococcaceae RepID=D1PMJ1_9FIRM Length = 285 Score = 152 bits (383), Expect = 3e-35, Method: Composition-based stats. Identities = 42/185 (22%), Positives = 78/185 (42%), Gaps = 11/185 (5%) Query: 210 PEKLCVIGIDNEELTRYLSRVALSSVA--------QGARQMGYQAAKLLHRLLDKEEMPL 261 P + +G + + + + S + Q R+ Y E + Sbjct: 87 PWEYYWVGFNGACANKLVQQTPFSDLHPVHHCKDPQAVREALYNIYLSRGPEPQCEALMT 146 Query: 262 QRILVPPVRVIERRSTDYRSL---TDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNL 318 + + +++ ++ + V+ A+ YI+ + I VD + AVG+SRS+L Sbjct: 147 GYLYIFMAHLMKEARDAMPNVGSSSSQYVLSAIKYIQFNYSHDISVDDIAKAVGVSRSHL 206 Query: 319 EKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDT 378 + F VG++ + ++ +A SLL ++ LSI EI+ G+ YF VFKK Sbjct: 207 YRVFMANVGQSPIDYLTNYRISEACSLLKNSNLSIAEIAVSVGFFDQFYFSRVFKKVKGV 266 Query: 379 TPKEY 383 P +Y Sbjct: 267 PPSKY 271 >UniRef50_B0K3C5 Response regulator receiver protein n=4 Tax=Thermoanaerobacter RepID=B0K3C5_THEPX Length = 530 Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats. Identities = 46/237 (19%), Positives = 98/237 (41%), Gaps = 5/237 (2%) Query: 150 EKYRGVVYQGLETAPENWQHAQNRLADWLQTLPPQTGIIAVTDARARHILQVCEHLHIPV 209 +K V+ N + Q + ++LQ Q + + + IL ++ + Sbjct: 295 KKEDIEVFLKPHFVSLNTKRKQEEMIEFLQLGDSQKALQLLKEVVG-EILTTTKNNLLEC 353 Query: 210 PEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPV 269 L I + + + +S V + + +G R + + L + + + + Sbjct: 354 QINLIEIMM---RIVKTISEVGMLTGEEG-RVFQFCFSHLQKLMRTQNYRGITLWATSFL 409 Query: 270 RVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGET 329 I + + V + + YI + K I++ ++ + ++ + FK+EVG T Sbjct: 410 EEISDLFAGAKRNENNIVERVVKYINENFEKEIRLKELSQTIYLNPEYFSRLFKKEVGCT 469 Query: 330 IHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDV 386 + ++E A+ L + +L+I+EI++ GY YF VFKK +P E+R + Sbjct: 470 YAEYLTRIRIEAAKKYLANPSLTISEIARKVGYQDANYFSKVFKKVVGISPSEFRKL 526 >UniRef50_B0PG61 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PG61_9FIRM Length = 533 Score = 151 bits (382), Expect = 4e-35, Method: Composition-based stats. Identities = 33/102 (32%), Positives = 51/102 (50%) Query: 287 VIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLL 346 + A YI+ H + ++ V + VG S S FK+E G+ + ++ +A+ LL Sbjct: 432 IRTAKQYIQEHYADPLTLEWVSNIVGFSGSYFSSLFKKETGQNFLEYLSEVRMNRAKELL 491 Query: 347 ISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNS 388 T LS+ E+ GY L+YF FKKA P E+R + S Sbjct: 492 RETNLSVAEVCVRVGYSDLKYFTKSFKKATGLKPGEFRKLYS 533 >UniRef50_A4XMF1 Two component transcriptional regulator, AraC family n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XMF1_CALS8 Length = 518 Score = 151 bits (382), Expect = 4e-35, Method: Composition-based stats. Identities = 39/186 (20%), Positives = 85/186 (45%), Gaps = 11/186 (5%) Query: 213 LCVIGIDN--EELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVR 270 + V G +N ++ + + + L + A + + K++ +L+ + RIL R Sbjct: 337 VEVFGENNLKYKMIKLIIMLLLETGAINKEE-SFDIEKVITEILNAD---AHRILETSKR 392 Query: 271 VI-----ERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEE 325 I + T + + + ++ +A+ +I + + I + Q+ + K FK+ Sbjct: 393 AILALFGNAKVTHEQIIHNDSINKAIDFINQNYNQEISLAQISAIFNFNPYYFSKLFKKY 452 Query: 326 VGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRD 385 G + + +++KA LL +++ SI EI+ M G+ YF FKK TP +R+ Sbjct: 453 TGVSYKTYLTKLRIQKACELLKNSSKSIKEIAFMVGFSDPNYFIKAFKKFVGVTPSFFRN 512 Query: 386 VNSEVM 391 + +++ Sbjct: 513 MPEQLI 518 >UniRef50_A4XMI8 Two component transcriptional regulator, AraC family n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XMI8_CALS8 Length = 516 Score = 151 bits (381), Expect = 5e-35, Method: Composition-based stats. Identities = 31/105 (29%), Positives = 55/105 (52%) Query: 286 AVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSL 345 + +A+ +I + K I + V + V ++ FKE G + ++ +++KA+ L Sbjct: 409 EIEEAIKFINENYYKDINMAMVANHVSLNYYYFSTIFKERTGMSFLDYLNKVRIDKAKEL 468 Query: 346 LISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSEV 390 L +T L I EIS+ GY + ++F +FK+ TP EYRD + Sbjct: 469 LANTNLKIWEISEKVGYKNPKHFARIFKEITGLTPNEYRDAQKRL 513 >UniRef50_B1QUU6 Two-component response regulator n=3 Tax=Clostridium butyricum RepID=B1QUU6_CLOBU Length = 351 Score = 151 bits (381), Expect = 5e-35, Method: Composition-based stats. Identities = 36/98 (36%), Positives = 49/98 (50%) Query: 290 AMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLIST 349 + YI + + I ++ V A +S L K FK+ G I+ K+EKA+ LL +T Sbjct: 249 VLIYISENYSEKITLESVSKACNLSVFYLSKLFKKNTGMKFIDYINLYKIEKAKQLLENT 308 Query: 350 TLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVN 387 +SI IS GY YF VFKK TP YR+ N Sbjct: 309 DMSIINISMSLGYDESGYFSKVFKKVVGVTPSAYRNKN 346 >UniRef50_C6CVC0 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CVC0_PAESJ Length = 539 Score = 151 bits (381), Expect = 5e-35, Method: Composition-based stats. Identities = 34/121 (28%), Positives = 58/121 (47%) Query: 270 RVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGET 329 I R + R AV +A YI H + + + + D V +SR+ + + FK+E G Sbjct: 419 HQIMDRISARRPQYGEAVERACEYITLHYAEDLMLQDIADHVHLSRTYISELFKKETGMN 478 Query: 330 IHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSE 389 + + ++EKA+ LL TL + + + + GY + YF +FK +P EY + Sbjct: 479 YNEYLMQVRMEKAKELLKRQTLKVADAAALVGYSNTSYFIKLFKNYTGLSPSEYMEQQRS 538 Query: 390 V 390 V Sbjct: 539 V 539 >UniRef50_Q5QL43 Two-component response regulator n=2 Tax=Geobacillus RepID=Q5QL43_GEOKA Length = 258 Score = 151 bits (381), Expect = 6e-35, Method: Composition-based stats. Identities = 39/175 (22%), Positives = 87/175 (49%), Gaps = 12/175 (6%) Query: 226 YLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEM--PLQRILVPPVRVIERRSTDYR--- 280 +S + + + Q A G+ + + + E+ L+RIL P + ++ ++ + Sbjct: 81 IVSHLQMFEIVQSAINAGFSG--YYLKPISRTELLSGLERILTPSLDTMKTKANQHYGKG 138 Query: 281 ----SLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHA 336 L +P + A+ YI+++ + +++V V +S+S+ + FK G T + Sbjct: 139 MESIDLANP-IESALRYIQDNYHLPLTLNEVASMVYLSQSHFSRLFKSATGMTFVEYLTQ 197 Query: 337 EKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSEVM 391 +++K++ LL ++L I+ I+ G+ + YF + FK+ TP EYR++ ++ Sbjct: 198 VRIQKSKYLLKMSSLPIDVIAHKTGFSNASYFATTFKRLEGKTPTEYRELLQKIY 252 >UniRef50_B0PFD6 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PFD6_9FIRM Length = 440 Score = 150 bits (380), Expect = 7e-35, Method: Composition-based stats. Identities = 53/196 (27%), Positives = 85/196 (43%), Gaps = 15/196 (7%) Query: 199 LQVCEHLHIPVPEKL---CVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLD 255 L +CE I + L C I ID R+L + S + Q H L Sbjct: 257 LSICERFRISIKNNLKNTCSIYIDQ---PRWLEELPASYIEITEEQEAN------HHLYY 307 Query: 256 KEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISR 315 + L+ +P + +R + D DP + + YI H + I +D + S+ Sbjct: 308 DTIVNLEDNSLPS--IYQRAADDGALPVDP-IDDVLDYIHQHYREQISLDDLARISNFSK 364 Query: 316 SNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKA 375 +L K+FKE+ +I I +++KA+ LL+ I I+Q G+ YF +FKK Sbjct: 365 YHLCKKFKEKTKTSIINYILMVRIDKAKELLLQNQDRIFVIAQKVGFNDTSYFNRIFKKV 424 Query: 376 YDTTPKEYRDVNSEVM 391 TPKE+ + N V+ Sbjct: 425 TGYTPKEFIEYNHSVL 440 >UniRef50_UPI0001C36936 two component transcriptional regulator, AraC family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C36936 Length = 527 Score = 150 bits (380), Expect = 7e-35, Method: Composition-based stats. Identities = 35/102 (34%), Positives = 57/102 (55%) Query: 284 DPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKAR 343 P + +A+ YIR H + I + + + + + L + FKE+VG+T + ++E A+ Sbjct: 413 SPVIDRALVYIREHYSENITLQSLAEDIYLHPVYLSRLFKEKVGQTFLEYLTHYRIEMAK 472 Query: 344 SLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRD 385 L + L I +I QM GY + QYF VFK+ TTPK +R+ Sbjct: 473 DYLRNPNLRIYDIGQMVGYETPQYFSRVFKELTGTTPKGFRE 514 >UniRef50_B3EYL7 Two-component response regulator n=5 Tax=Firmicutes RepID=B3EYL7_BACST Length = 404 Score = 150 bits (379), Expect = 7e-35, Method: Composition-based stats. Identities = 46/171 (26%), Positives = 80/171 (46%), Gaps = 5/171 (2%) Query: 219 DNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTD 278 D+ E +S +S + RQM + LH ++ +V E+ Sbjct: 228 DSNEFIVVISWKPIS--EEQCRQMETALKQHLHIRASVYIETVEGGMVGVATAYEKCKEQ 285 Query: 279 Y--RSLTDPAVIQAMHYIRNHACK-GIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIH 335 S P V +A YI+ H + + ++ V + + +S L + K+E+G + ++ Sbjct: 286 MVEESRLSPIVRRARQYIQKHFSQSDLTLESVAEFLNVSPVYLSRMIKQELGISFIHLLT 345 Query: 336 AEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDV 386 ++EKA LL+ST L I+EI++ GY + YF + FKKA +P +YR Sbjct: 346 KIRMEKAAELLLSTELPIHEIAERVGYDTQHYFSTAFKKAMGVSPNQYRRT 396 >UniRef50_A5Z5R3 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z5R3_9FIRM Length = 509 Score = 150 bits (379), Expect = 7e-35, Method: Composition-based stats. Identities = 33/126 (26%), Positives = 65/126 (51%) Query: 261 LQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEK 320 L+ I+ + ++ + T + ++++YI+ H + ++Q+ + I+ S + Sbjct: 380 LKSIVSDMINDLQIQLTQSVKKYSSFIEESLNYIKEHLEDDLSLEQIAQHIHINESYFSR 439 Query: 321 RFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTP 380 FK+E G ++ + I+ ++ KA+ LL ++ L EIS+ G YF +FKK +P Sbjct: 440 TFKKECGNSVISYINNLRINKAKELLATSNLKTFEISEAVGIHDPAYFSVLFKKNTGMSP 499 Query: 381 KEYRDV 386 K YRD Sbjct: 500 KAYRDQ 505 >UniRef50_C0ET05 Putative uncharacterized protein n=2 Tax=Firmicutes RepID=C0ET05_9FIRM Length = 355 Score = 150 bits (379), Expect = 9e-35, Method: Composition-based stats. Identities = 65/341 (19%), Positives = 130/341 (38%), Gaps = 49/341 (14%) Query: 61 IADFDDKQIEQALADVDVPIVG-VGGSYHLAESYPPVHYIAT---DNYALVESAFLHLKE 116 + D K I L D+++P + + + + P I T D++ + A + Sbjct: 41 VEMIDSKDINLMLVDINIPGMDGMEVIKYARKKLPKAVIIITTAYDDFNIAHRA----IK 96 Query: 117 KGVNRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRG-----VVYQGLETAPENWQHAQ 171 V+ F L + K E +F + E + G + +E +++ + Sbjct: 97 LKVDDF----LLKPIRKEVLLESVKSFASRLGEGRQTGKSNKLLSKFEMELKKCSYKASV 152 Query: 172 NRLADWLQTL---PPQTGIIAVT-DARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYL 227 + L +++ L II+ A+ ++++ E L I D EL + Sbjct: 153 DILREYIDQLYLEEHDVNIISKRLQEVAKAVVRISEELGI----------TDTNELVVQM 202 Query: 228 SRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAV 287 ++ + + + Y ++ V ++ + L++ + Sbjct: 203 EKLKIKYLLYNNKHDAY------------------NEIIKMVDILFDKMNIKGKLSEGGM 244 Query: 288 IQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLI 347 + YI + KGI ++ V + V IS L K FK+E+G + K++ A+ +L+ Sbjct: 245 KAVIDYIERNLKKGISLEDVANHVNISTYYLSKIFKKEMGVNFITYVTDRKMDLAKEMLV 304 Query: 348 STTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNS 388 +T + + I+ Y YF FKK TP EYR+ Sbjct: 305 NTDIPVLNIALDLAYNEANYFSKAFKKKTGLTPSEYREKYR 345 >UniRef50_C7IHS7 Transcriptional regulator, AraC family n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IHS7_9CLOT Length = 761 Score = 150 bits (379), Expect = 9e-35, Method: Composition-based stats. Identities = 39/137 (28%), Positives = 72/137 (52%), Gaps = 4/137 (2%) Query: 252 RLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAV 311 LD+ + L I + + E+ + ++ +++ + YI + K I ++ + + V Sbjct: 628 ETLDEASLFLSNIYLQIIEYNEKFKVEGKT----HIMKILDYIHENYKKDIAINTLAEHV 683 Query: 312 GISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSV 371 G+S S++ K F +E GE I I+ ++E+A+ LL T ++IN+I+ GY + Q F Sbjct: 684 GLSYSHVRKIFNDETGENIVNYINNMRIEEAQRLLRQTNMNINDIALSLGYNNKQSFNRF 743 Query: 372 FKKAYDTTPKEYRDVNS 388 FKK P EYR + + Sbjct: 744 FKKYVGINPGEYRSIKA 760 >UniRef50_C9BAM1 Helix-turn-helix domain-containing protein n=12 Tax=Enterococcus faecium RepID=C9BAM1_ENTFC Length = 483 Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats. Identities = 40/179 (22%), Positives = 89/179 (49%), Gaps = 8/179 (4%) Query: 212 KLCVIGIDNEELTRYLSRVALSSVAQGARQMGY-QAAKLLHRLLDKEEMPLQRILVPPVR 270 +L + ++ + +L + + Y Q + +H+ +E LQ++L+ ++ Sbjct: 311 QLAAMMPEDIRYSSFLLFMEIQRELIDLEDEEYLQGIEKIHQAKTVQE--LQQLLLSFIK 368 Query: 271 VIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETI 330 +R+ + V + + + H + + + +V + + ++ L + FK+E ++ Sbjct: 369 KHQRQKKYSDN-----VEKVIVILHQHYQEPLTLKEVSENLHLNVMYLGQLFKKETKKSF 423 Query: 331 HAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSE 389 A ++ ++EKA+ LL+ + +INEI+ GY + YF +FKK +PKEYR+ + E Sbjct: 424 SAYLNHLRMEKAKQLLLHSNQNINEIASEIGYNNTTYFSKLFKKIVGRSPKEYRENSGE 482 >UniRef50_A4ITD0 Sugar ABC transporter (Permease) n=3 Tax=Bacillaceae RepID=A4ITD0_GEOTN Length = 366 Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats. Identities = 39/125 (31%), Positives = 67/125 (53%), Gaps = 1/125 (0%) Query: 267 PPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEV 326 V +IE+ D+ D + +A+ YIR + IK +V + V IS + F+++ Sbjct: 240 DLVTIIEKLGLDHEETNDWLIERALEYIRQFYREPIKASEVANVVNISANYFSTIFRQKT 299 Query: 327 GETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDV 386 G+T + ++ ++ +AR LL T+L + I+ G+ +YF VFKK TP EYR++ Sbjct: 300 GKTFNEYVNLLRVNEARKLLSETSLRVGVIANNVGFHEYKYFVEVFKKFTGMTPTEYRNL 359 Query: 387 -NSEV 390 N E+ Sbjct: 360 YNREL 364 >UniRef50_C6CT66 Two component transcriptional regulator, AraC family n=2 Tax=Bacillales RepID=C6CT66_PAESJ Length = 262 Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats. Identities = 36/149 (24%), Positives = 73/149 (48%), Gaps = 9/149 (6%) Query: 241 QMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACK 300 ++ ++ + L+R+ E ++L +T+ + V +A+ Y+ H + Sbjct: 117 ELAFRKEEELNRIERMERFVDTKLL---------ETTEQETQYSAPVKEAIQYLEEHLHE 167 Query: 301 GIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMC 360 + + + D + ++ S FKE+ G T + ++++A+ LL +T LSINEI++ Sbjct: 168 PVTMRDIADHLHMNASYFSVLFKEQTGLTFSDYLTRRRVQRAKELLTNTRLSINEIAEKA 227 Query: 361 GYPSLQYFYSVFKKAYDTTPKEYRDVNSE 389 GY + +YF VF+ +P +YR S Sbjct: 228 GYQTAKYFVKVFRSHEGVSPGQYRKNVSH 256 >UniRef50_B8I4H6 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulolyticum H10 RepID=B8I4H6_CLOCE Length = 760 Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats. Identities = 43/167 (25%), Positives = 79/167 (47%), Gaps = 4/167 (2%) Query: 222 ELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRS 281 +YL + +S + LD+ + L I + + E + +S Sbjct: 597 STIKYLLDLNISVSKVFGNDFNIYSKLAEIDTLDEAGLFLSNIYLQIIEYNEMFKVEGKS 656 Query: 282 LTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEK 341 +++ + YI + K I ++ + + VG+S S++ K F +E GE I I+ ++E+ Sbjct: 657 ----HIVKILDYIHKNYKKDIAINMLAEHVGLSYSHVRKIFNDETGENIVNYINNMRIEE 712 Query: 342 ARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNS 388 A+ LL T ++IN+I+ GY + Q F FKK P EYR++ + Sbjct: 713 AQRLLRQTNMNINDIALSLGYNNKQSFNRFFKKYVGINPGEYRNIKA 759 >UniRef50_B0NX83 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0NX83_9CLOT Length = 539 Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats. Identities = 34/126 (26%), Positives = 63/126 (50%), Gaps = 4/126 (3%) Query: 261 LQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKG-IKVDQVLDAVGISRSNLE 319 ++ +++ +R+ R S + +A +I + + + + V D VG+S S+ Sbjct: 414 IEELIIQAIRMRNERLGKKHS---SLITEAKEFIVKNYQEETLSLSDVADQVGLSSSHFS 470 Query: 320 KRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTT 379 FK+E GE+ + + +++KA+ +L T + ++IS GY YF +FKK T Sbjct: 471 TTFKQETGESFVEFLTSVRMDKAKEMLCFTDMKASQISYEVGYKDPHYFSYLFKKTQGCT 530 Query: 380 PKEYRD 385 P EYR Sbjct: 531 PSEYRS 536 >UniRef50_B0NF43 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NF43_EUBSP Length = 519 Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats. Identities = 40/158 (25%), Positives = 71/158 (44%), Gaps = 1/158 (0%) Query: 228 SRVALSSVAQGARQMGYQAAKLLHRLLDKEEMP-LQRILVPPVRVIERRSTDYRSLTDPA 286 S+ LS + + + Q + + I+ + S + Sbjct: 356 SKKMLSDMEKTLYDITLQKESFSKSIYRCRHISEYYSIMRTVIESTAEYIKIAASRRNIL 415 Query: 287 VIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLL 346 + + YI + +GI V ++ +G+S S L + FK+E G TI I+ +K++KA+ L Sbjct: 416 IYECEKYIDENYERGITVSEISRYIGVSMSYLSRIFKDETGNTIINYINEKKIQKAKEYL 475 Query: 347 ISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 T + I EI++ G+ + YF FKK +PKEY+ Sbjct: 476 GGTDMKIYEIAEKLGFENTTYFSYFFKKYTGISPKEYK 513 >UniRef50_A8RPD4 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RPD4_9CLOT Length = 532 Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats. Identities = 55/267 (20%), Positives = 102/267 (38%), Gaps = 14/267 (5%) Query: 125 YGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRL-ADWLQTLPP 183 G SS + E A + ++ + PEN++ L ++ + Sbjct: 271 IGSRVSSLEHLPDSLETAVKSVMLRIDLGVGNIIRYDRLPENYKKDSYPLPKEFEVKMER 330 Query: 184 QTGIIAVTDARARHILQVCEHLHIPVPEKLC---VIGIDNEELTRYLSRVALSSVAQGAR 240 Q ++A + +L E ++ V + + G+ L L R L Sbjct: 331 QVPLLAA----GKLVLIGEEAMNRAVEGQYRYYRLYGL----LEEMLERTGLVFSDIMKD 382 Query: 241 QMGYQAAKLLHRLLDKEEMP-LQRILVPPVRV-IERRSTDYRSLTDPAVIQAMHYIRNHA 298 A + RL + + L+ + V V E + V YI H Sbjct: 383 YEIPDAEPYIRRLENCTTLNQLKLVWADYVSVSCELCQRQKDGMGSRPVRMIKEYIGEHY 442 Query: 299 CKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQ 358 + I ++ + D V ++ + L FK+E G+T+ + +++KA+ +L + +I EI+ Sbjct: 443 SENITLNDIADIVFLNPAYLSAMFKKETGQTLTQYLIDVRIDKAKEMLRNPERTIGEIAC 502 Query: 359 MCGYPSLQYFYSVFKKAYDTTPKEYRD 385 M GY ++F +F K P EYR Sbjct: 503 MVGYQDERHFSKLFSKMTGVKPTEYRR 529 >UniRef50_A6TRZ8 Response regulator receiver protein n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TRZ8_ALKMQ Length = 529 Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats. Identities = 40/163 (24%), Positives = 69/163 (42%), Gaps = 3/163 (1%) Query: 225 RYLSRVALSSVAQGARQMG-YQAAKLLHRLLD-KEEMPLQRILVPPVR-VIERRSTDYRS 281 R + + L G K L +LL L+ + +R +I ++ Sbjct: 362 RLIELLILMKRNIPYEMKGKLDDEKYLIQLLKIDNIKELKNSYLNYIRSIIFSIEEIRKN 421 Query: 282 LTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEK 341 + + +A+ +I+ H + I ++ V + +S K FKE G+ + K+E+ Sbjct: 422 ELNGLITKALAFIQKHYNENICLNDVAQEINMSYHYFSKFFKESTGKNFVDYLTELKIER 481 Query: 342 ARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 ++ LL + ++SI EI GY YF FKK TP YR Sbjct: 482 SKELLKNQSISIKEICYEIGYSDPNYFSKAFKKITGVTPTAYR 524 >UniRef50_UPI0001C358FB two component transcriptional regulator, AraC family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C358FB Length = 273 Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats. Identities = 30/100 (30%), Positives = 58/100 (58%) Query: 284 DPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKAR 343 + +A++Y+ +H + I ++ + + V ++++ + FK+E G++ + +LEKA+ Sbjct: 162 SRVIRKALNYMEDHYHEDISLESISEVVFLNKNYFSELFKKETGKSFVQYLTEYRLEKAK 221 Query: 344 SLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEY 383 LL + +E++ M G+ + YF SVFKK TPKEY Sbjct: 222 LLLAISGFKGSEVADMTGFQNNSYFISVFKKYVGCTPKEY 261 >UniRef50_A4FN08 LacI-type transcriptional regulator n=2 Tax=Actinomycetales RepID=A4FN08_SACEN Length = 335 Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats. Identities = 73/251 (29%), Positives = 112/251 (44%), Gaps = 23/251 (9%) Query: 7 RITLLFNANKAYDRQV-VEGVGEYLQASQSEWDIFIEEDFRA----RIDKIKDWLGDGVI 61 R+ +L + + V + G+G L+ + + ++ D R + D VI Sbjct: 58 RVAVLVPFLQPWFFGVALAGIGTRLRQADLDMLVYQVGDMRGVEEYLGELPLRRNVDAVI 117 Query: 62 A---DFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKG 118 A D D+++I L +V VP+V V + P + DN A SA HL G Sbjct: 118 ALSLDLDEREIA-VLDEVGVPVVFVS------QRIPERASVFIDNAAAARSATRHLLNLG 170 Query: 119 VNRFAFYGLPESSGKRWAT-EREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADW 177 AF +S+G W++ ER +R+ +AE R V G E+ P A L Sbjct: 171 HTSIAFVQSADSTGFEWSSAERVNGYREAMAEAGVRPQVLVG-ESGPRGGALAAGEL--- 226 Query: 178 LQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQ 237 L P T I A +D A +L+V + + VPE + V+G DN ++ L LS+VAQ Sbjct: 227 LSRAEPPTAIFAESDDVAMGVLRVLQRSGLAVPEVMSVLGFDNHDMAELLD---LSTVAQ 283 Query: 238 GARQMGYQAAK 248 +MG AA+ Sbjct: 284 PVSEMGAVAAR 294 >UniRef50_B5YFJ6 Transcriptional regulator, putative n=2 Tax=Dictyoglomus RepID=B5YFJ6_DICT6 Length = 287 Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats. Identities = 34/115 (29%), Positives = 61/115 (53%) Query: 273 ERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHA 332 R + ++YI + K + +D++ V +S+ L + FKE + + Sbjct: 172 RRNQDGRLGYKIERIKDVLNYINQNYNKNLSLDELSRQVDMSKFYLCRLFKESLRMSPVE 231 Query: 333 MIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVN 387 I+ +++KA LLI+T +S++EI+ CG+ ++ YF VFKK TTP ++R N Sbjct: 232 YINKVRVDKAMELLINTDMSVSEIAFECGFDNISYFIKVFKKYMHTTPLKFRKQN 286 >UniRef50_C4ZBY6 Transcriptional regulator, AraC family n=7 Tax=Clostridiales RepID=C4ZBY6_EUBR3 Length = 280 Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 39/193 (20%), Positives = 79/193 (40%), Gaps = 12/193 (6%) Query: 208 PVPEKLCVIGIDNEELTRYLSRVALSSV----AQGARQMGYQAAKLLHRLLDKEEMPLQR 263 +P + I D + L+ L+ ++ + + + + + Sbjct: 88 KLPWEYIWIEFDGLRVKEALTTTELTKNNPVYHTHSKDIREKLVEEMLYITRHPSESPYH 147 Query: 264 ILVPPVRVIERRSTDYRS--------LTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISR 315 ++ ++ +S ++D + +AM+YI + I ++ + GI+R Sbjct: 148 LIGHMYLFLDYLMQSAKSSKLVPGGKMSDFYIKEAMNYIEQNFQNDISIEDIAGVCGINR 207 Query: 316 SNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKA 375 S L K FK VG + + ++ KA LL T+LSI ++ GY + +F FK Sbjct: 208 SYLGKIFKNSVGHSPQEFLMNYRMIKATELLKLTSLSIADVGSAVGYENQLHFSRAFKNI 267 Query: 376 YDTTPKEYRDVNS 388 Y P+E+R+ + Sbjct: 268 YGVAPREWRNEHK 280 >UniRef50_C5EK80 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C5EK80_9FIRM Length = 291 Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 40/191 (20%), Positives = 76/191 (39%), Gaps = 12/191 (6%) Query: 210 PEKLCVIGIDNEELTRYLSRVALSSV----AQGARQMGYQAAKLLHRLLDKEEMPLQRIL 265 P + + D + L L+ AR + + + + + + ++ Sbjct: 90 PWEYTWLEFDGLRVKEALELAGLTMDNPVYHSNARDLSLELKNEMLYIANHSDQSPFHLI 149 Query: 266 VPPVRVIER--------RSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSN 317 ++ R L D + +A +I + I V+ + ++RS Sbjct: 150 GHLYLFLDYLTRSSSSRRMMRGGKLQDFYIREATSFIEQNFQNDISVEDIAAFCNLNRSY 209 Query: 318 LEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYD 377 K F++ VG++ + + ++ KA LL T L+I +I GYPS +F FKK Y Sbjct: 210 FGKIFRDAVGKSPQEFLISYRMTKAAELLKLTELTIKDIGNAVGYPSQLHFSRAFKKTYG 269 Query: 378 TTPKEYRDVNS 388 +P+E+R N Sbjct: 270 ISPREWRSENK 280 >UniRef50_C7GGB1 Putative two-component response regulator n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GGB1_9FIRM Length = 551 Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 41/168 (24%), Positives = 70/168 (41%), Gaps = 1/168 (0%) Query: 221 EELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYR 280 + +S + S Y+ A+ + L + I VIE R Sbjct: 374 DLYVSAVSVLEKSGYTSENLLEQYKDAQKMEIFLGTAGQAREYIKNLFGAVIELREQGME 433 Query: 281 SLTDPAVIQAMHYIRNHA-CKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKL 339 D + A YI ++ + I ++ V V +S S+ F +E G T + ++ Sbjct: 434 RRYDNLIQHAKAYIEDNYNHEDISLNMVASEVNLSSSHFSTVFGQETGVTFVEYLTKVRM 493 Query: 340 EKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVN 387 +KA+ LL +T EI+ G+ YF ++FKK TP+EYR+ + Sbjct: 494 DKAKQLLRTTGTKTTEIAFEVGFRDAHYFSNLFKKTQGCTPREYRNRS 541 >UniRef50_A9KQP4 Two component transcriptional regulator, AraC family n=2 Tax=Clostridiales RepID=A9KQP4_CLOPH Length = 533 Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 37/127 (29%), Positives = 59/127 (46%), Gaps = 1/127 (0%) Query: 260 PLQRILVPPVRVIERRSTDYRSLTD-PAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNL 318 L+ + + R + + +T V +A YIR++ K + +++V V IS Sbjct: 403 ALRLWFAERIEIACRNVENKKKVTSISTVEKAKLYIRDNYQKDLSLEEVSRQVDISPYYF 462 Query: 319 EKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDT 378 K FKEE G + ++ A+ LL+ + S+ EI M GY YF FKK Sbjct: 463 SKVFKEETGTNFIDYLTELRMSVAKQLLLESERSMKEIGIMVGYSDPNYFSRSFKKNIGI 522 Query: 379 TPKEYRD 385 TP EY++ Sbjct: 523 TPTEYKE 529 >UniRef50_A6P0J9 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6P0J9_9BACE Length = 425 Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 55/280 (19%), Positives = 110/280 (39%), Gaps = 36/280 (12%) Query: 127 LPESSGKRWATEREYAFRQL-----VAEEKYRGVVYQGLETAPENWQHAQNRLADWLQTL 181 + + R RQL + + K + W ++RLA +Q Sbjct: 160 HSHKNWDDYEQLRLRYQRQLTVGDHIQKRKQSKPQNTSAALSAPTWSDLEDRLAREIQGR 219 Query: 182 PPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNE-------ELTRYLSRVALSS 234 + + + D +L V G + + EL L+R++ Sbjct: 220 NREAALACLDDLFEELVL---------------VEGGNFDSIKLHFFELYISLARMSTER 264 Query: 235 VA--QGARQMGYQAAKLLHRLLDKEEMPLQ--RILVPPVRVIERRSTDYRSLTDPAVIQA 290 A + + ++ L+ L + + ++ V I S T +A Sbjct: 265 GASLRNIFGLDFKFINSLNELNTLDSLAQWSRELVAHFVDDIFADLPQVSSAT----TRA 320 Query: 291 MHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTT 350 + YI H + + + A+ ++ S+L K F++E+G + ++ ++E + L+ +T Sbjct: 321 VSYINAHYMDKLTLRDLASALFLNESSLSKLFRQELGTSFTDYLNRIRIEHSTELMRNTD 380 Query: 351 LSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR-DVNSE 389 S+ EIS + G+ YF +FKK TTP++Y+ +N+E Sbjct: 381 RSLLEISGLVGFDDQSYFTKIFKKVTGTTPRQYKSQLNNE 420 >UniRef50_C6D3S3 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3S3_PAESJ Length = 538 Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 45/174 (25%), Positives = 73/174 (41%), Gaps = 15/174 (8%) Query: 227 LSRVALSSVAQGARQM--------GYQAAKLLHRLLDKEEMP-----LQRILVPPVRVIE 273 L+ L+ Q +QM G QA +LL L E + L+ ++ Sbjct: 353 LTPQLLALFIQDFQQMVHYVLQIKGIQAHQLLSDSLSVERFARAGRSAKDALIWIRHIVG 412 Query: 274 RRSTDYRSLTDP--AVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIH 331 + SL V QA YI H + I + + V ++ L + FK E G +I Sbjct: 413 KSLDYMNSLEHSPSVVEQAKTYIHQHLAEEISREDIASHVYLNPDYLTRIFKRETGMSIS 472 Query: 332 AMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRD 385 + ++L A LL +T L+++ ++ GY + +F +FKK P EYR Sbjct: 473 DYLLQQRLRIAAELLANTDLAVSAVASRIGYANFSHFSRIFKKYMGINPLEYRQ 526 >UniRef50_B5CXD1 Putative uncharacterized protein n=1 Tax=Bacteroides plebeius DSM 17135 RepID=B5CXD1_9BACE Length = 293 Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 40/169 (23%), Positives = 72/169 (42%), Gaps = 6/169 (3%) Query: 216 IGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERR 275 I ID+ R+ R+ L + +MGY L + L + +P R I + Sbjct: 126 IYIDDSPTARFNDRIQLFNEILVNLEMGYSIENLEYITLCLWYLLGSFRYIPQFREINKP 185 Query: 276 STDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIH 335 T + + ++Y++ + K + ++ + ++V S + L F ++ G + + Sbjct: 186 K------TQDTIQKVINYMKANLDKQLTLEDMAESVNYSPTYLSTLFTQKSGMSPINYFN 239 Query: 336 AEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 K++KA LL T EI+ + YF VF K +PKEYR Sbjct: 240 QLKIQKACQLLDFTDKKAKEIAFELAFSDPYYFSKVFTKYMHMSPKEYR 288 >UniRef50_B2GEN0 Transcriptional regulator n=1 Tax=Lactobacillus fermentum IFO 3956 RepID=B2GEN0_LACF3 Length = 278 Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats. Identities = 45/190 (23%), Positives = 84/190 (44%), Gaps = 12/190 (6%) Query: 210 PEKLCVIGIDNEELTRYLSRVALSSVAQ-GARQMGYQAAKLLHRLLDKEEMPLQ------ 262 P +G + ++ ++ +S + Y+ A ++ +L + + ++ Sbjct: 85 PWSYVWLGFTGKSAATWIDQINISEIRPVFNSNKSYELANCVNEILALDNLSMENNLRAL 144 Query: 263 ----RILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNL 318 R L S + V QA+ YI +H K + V+ + AV ++RS L Sbjct: 145 SCFFRFLSYIATGTVINIQQANSEKNHYVTQAIQYISHHLSK-VTVESLAHAVNLNRSYL 203 Query: 319 EKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDT 378 FK ++ T I ++ KAR LL S+ +SI+++++ CGY F VFK+ Y Sbjct: 204 TSLFKHDLDLTPSEYIQNFRITKARHLLESSDISIDQVAEQCGYQRTNSFTRVFKRTYGI 263 Query: 379 TPKEYRDVNS 388 +P++YR Sbjct: 264 SPRQYRQETK 273 >UniRef50_B7GLF3 Transcriptional regulator, LacI family (HTH and periplasmic-binding domains) n=10 Tax=Bacillales RepID=B7GLF3_ANOFW Length = 343 Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats. Identities = 64/283 (22%), Positives = 115/283 (40%), Gaps = 22/283 (7%) Query: 1 MFTKRHRITLLFNA------NKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARI----D 50 + K I LL + + +V+ GV +Y+ + + +F + R Sbjct: 60 VMNKSKTIGLLVSGMTRSAVKDNFTFEVMTGVNDYIAKTDYDVILFNTNSTKQREKTYSQ 119 Query: 51 KIKDWLGDGVIAD---FDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALV 107 ++ DGVI DD + + + D+P V + + V Y+ TDN Sbjct: 120 LCRERRVDGVILQGIKTDDPYLTEVVES-DIPCVLID----IPIQSDRVGYVTTDNVHGA 174 Query: 108 ESAFLHLKEKGVNRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENW 167 + A HL E G A + + + +R F + + E + + + Sbjct: 175 KKAVQHLLELGHRHIAMMNGHDYAFV--SKQRLQGFYEAMEEANVPVQK-EWIVNGDFSE 231 Query: 168 QHAQNRLADWLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYL 227 + A+ R + T I +D A +++ + L + VPE + V+G D+ L Y+ Sbjct: 232 EIAEARAYELFAKHQHITAIFCASDLMALGVMKALKQLGLRVPEDVSVVGYDDILLASYV 291 Query: 228 SRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVR 270 S AL++VAQ QMGY+AA +L +L+ E + + V Sbjct: 292 S-PALTTVAQNKFQMGYEAASMLIDMLEGNEAKVVTLRTQLVE 333 >UniRef50_A9WH32 Sensor protein n=2 Tax=Chloroflexus RepID=A9WH32_CHLAA Length = 1202 Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats. Identities = 38/142 (26%), Positives = 62/142 (43%), Gaps = 1/142 (0%) Query: 248 KLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQV 307 + + +L K L +ERR V +AM YI +H + + Sbjct: 1059 QGVTTILSKGIFSADETLAHLQAALERRRRLSDQAQ-MLVRKAMAYIHSHYTHPLTRQDI 1117 Query: 308 LDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQY 367 VG+S L F++E+G T ++ ++ +AR LL + SI I+ G+ S Y Sbjct: 1118 AHYVGMSEDYLTHCFRQELGTTPVEYLNRYRVLQARHLLAESDKSITNIALEVGFSSSSY 1177 Query: 368 FYSVFKKAYDTTPKEYRDVNSE 389 F VF+K +P+EYR + Sbjct: 1178 FSRVFRKEVGQSPEEYRRLKQS 1199 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 60/248 (24%), Positives = 96/248 (38%), Gaps = 17/248 (6%) Query: 55 WLGDGVIA-----DFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVES 109 W G+I + Q+ QA+ D P++ VG P I +N + Sbjct: 87 WNTHGLIIINPLQRPERSQMVQAIRDAGHPVIFVGSGE-------PGPTIVANNAGGIYL 139 Query: 110 AFLHLKEKGVNRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQH 169 A HL E G + AF E + +R AF +A + + + Sbjct: 140 ALQHLIEHGHRQIAFIAGSEHDLEGDTGDRLRAFHSSMARFGLEVDE-RLIAFGRHVFTG 198 Query: 170 AQNRLADWLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSR 229 + L T P T ++A D A + + VP+ + +IG D+ L+ Sbjct: 199 GYTAMRQLLATGVPFTAVLASNDESALGAISALQEAGYRVPDDIAIIGFDDRP-EGLLAE 257 Query: 230 VALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQ 289 AL+SV +MGYQA KL+ L +E +PL ++ P R+I R S + + Sbjct: 258 PALTSVQIPLFKMGYQALKLMVHHL-RERVPLPELVQVPTRLIIRESCG--CSQNAVLAD 314 Query: 290 AMHYIRNH 297 A+ H Sbjct: 315 ALEMTSLH 322 >UniRef50_A5Z5Z2 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z5Z2_9FIRM Length = 533 Score = 148 bits (375), Expect = 3e-34, Method: Composition-based stats. Identities = 28/101 (27%), Positives = 51/101 (50%) Query: 287 VIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLL 346 + +A+ YI+ + K I + + + V +S FK++ G+ + I ++E A+ +L Sbjct: 433 LRKAIKYIKENYDKQITAETLAEVVNLSPVYFSHLFKKQTGKNMTDYITEYRMEIAKKML 492 Query: 347 ISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVN 387 T +I EI+ G+ +YF FK+ TP EYR + Sbjct: 493 FDTDKTIFEIAVAVGFQDQRYFSKRFKQIVGKTPSEYRKLK 533 >UniRef50_C9RT55 Two component transcriptional regulator, AraC family n=4 Tax=Bacillales RepID=C9RT55_GEOSY Length = 259 Score = 148 bits (375), Expect = 3e-34, Method: Composition-based stats. Identities = 32/145 (22%), Positives = 71/145 (48%), Gaps = 2/145 (1%) Query: 244 YQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIK 303 ++A + + +++E +R++ + + D T + +A+ +I I Sbjct: 115 FEAVERAIHVSEQKER--ERVMKQLIDDKLINALDRHPQTREPIREAIQFIDQRLKDDIS 172 Query: 304 VDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYP 363 + V + V ++ S FKE++ T + ++++A+ LL++T +++ EI++ CGY Sbjct: 173 LKDVAEHVHLNPSYFSTLFKEQMQLTFSEYLTRRRMQRAKELLMTTDMTVAEIAEECGYR 232 Query: 364 SLQYFYSVFKKAYDTTPKEYRDVNS 388 + +YF +FK+ TP YR Sbjct: 233 TAKYFIHLFKEMEGKTPSSYRKSQK 257 >UniRef50_A8ML53 Transcriptional regulator, AraC family n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8ML53_ALKOO Length = 245 Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats. Identities = 34/156 (21%), Positives = 72/156 (46%) Query: 229 RVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVI 288 RV V+ + + YQA + L + + + ++ Sbjct: 80 RVIQKGVSTYSSKSKYQAFAKAIHKTSSKIEALNMGKTMVTAYATQVKKSLNKVDNISIR 139 Query: 289 QAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLIS 348 +A+ YI N+ + + +++V + +S+ +FK+E+ + + ++EK++ LL + Sbjct: 140 RAIDYILNNLGETLTLEEVANHANLSKCYFCTQFKKEMKMSFTDYLSHARIEKSKYLLCN 199 Query: 349 TTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 + SI +I+ + G+ S YF + FKK +PKE+R Sbjct: 200 SNKSILDIAILIGFNSQSYFTTQFKKYTGVSPKEFR 235 >UniRef50_UPI0001788C4E two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788C4E Length = 538 Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats. Identities = 35/114 (30%), Positives = 59/114 (51%) Query: 274 RRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAM 333 R T S + + Y+ H I + Q+ +SR + ++FK+E G T+ Sbjct: 423 RVLTQIHSKDNHIIHDIAQYLEQHYHDEISLQQIAGKFFLSREYISRKFKQEFGVTLSDF 482 Query: 334 IHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVN 387 + ++EKA++LL++ + I +I++M GY +YF VFKK TP EYR + Sbjct: 483 LGRIRIEKAKTLLLNPQIRIAQIAEMVGYQDEKYFSKVFKKMEGFTPNEYRKKH 536 >UniRef50_C0ZDD0 Probable transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZDD0_BREBN Length = 298 Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats. Identities = 40/164 (24%), Positives = 76/164 (46%), Gaps = 1/164 (0%) Query: 227 LSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPA 286 LS + + Q ++ + + L ++ R ++ + + D Sbjct: 128 LSIPPEAKLVQLLLKIYQEVCEKRVTDLYCSSAKAYEFVMECYRFMKNIDNPSKQVPD-R 186 Query: 287 VIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLL 346 + +A+ +I+ H + I + + +A G+SR L F+E + T I ++EKA LL Sbjct: 187 ISEAVCFIQAHYKETISLGDIANAAGLSRYYLINLFREYLNTTPLQYITKLRIEKAMDLL 246 Query: 347 ISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSEV 390 T LS+N+I+ GY + YF VFKK T+P ++R+ + + Sbjct: 247 TQTNLSVNDIALAIGYANANYFNKVFKKLIGTSPGQFRECKNSL 290 >UniRef50_B1HSI7 Transcriptional regulator, AraC family n=2 Tax=Bacillaceae RepID=B1HSI7_LYSSC Length = 308 Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats. Identities = 49/218 (22%), Positives = 98/218 (44%), Gaps = 15/218 (6%) Query: 187 IIAVTDARARHILQVCEHLHIPVPEKLCVIGI----DNEELTRYLSRVALSSVAQGARQM 242 I+ R + ++ E L+ + E+ +G+ +N + +YL ++ + + A + Sbjct: 93 ILLDNVKNGR-MEKLTEVLNYSIVEQ-AELGVLSKRNNLKSVQYLMITGIALICRAAIEG 150 Query: 243 GY-QAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPA--------VIQAMHY 293 G + +++ Q L+ + ++E DY S A + +H+ Sbjct: 151 GLNEETAFTLSDFYIQKLEDQNNLIDILSLMEEAIYDYTSRVAQASTRKFSAPITTCVHF 210 Query: 294 IRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSI 353 I N I +DQ+ +S + L FK+EVG + I +++++A+ LL T I Sbjct: 211 IENQLYGDITLDQLSAICHLSPNYLSSLFKKEVGISFTEYIQQQRIDEAKKLLTFTNYPI 270 Query: 354 NEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSEVM 391 +I + + YF VFKK TPK+YR +++ ++ Sbjct: 271 LDIGSLLNFTDQSYFIKVFKKFTGITPKQYRRLSNRIL 308 >UniRef50_A9U777 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U777_PHYPA Length = 561 Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats. Identities = 38/166 (22%), Positives = 79/166 (47%), Gaps = 3/166 (1%) Query: 223 LTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSL 282 L L+R ++ A +M + LH ++ +R+IE R + + Sbjct: 394 LLTQLNRWSVDHAALEEVEMDRVSHYQLHATRKD---AFHYLIHAALRLIEARDDEKKEH 450 Query: 283 TDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKA 342 T+ V + Y+ H + + + D V ++ + + +K+ G + I E+++KA Sbjct: 451 TNQVVSRLNRYVEEHLDSDLSLTTLSDLVHLNPYYMSRLYKQMTGVNLPDYITDERIKKA 510 Query: 343 RSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNS 388 + L++ + L ++EI + G+ S YF +FKK +TP+E+R+ + Sbjct: 511 KELVVESHLKMHEICKKVGFESPAYFTRIFKKKTGSTPQEFREKHQ 556 >UniRef50_A4XMG0 Two component transcriptional regulator, AraC family n=2 Tax=Thermoanaerobacterales RepID=A4XMG0_CALS8 Length = 529 Score = 148 bits (374), Expect = 4e-34, Method: Composition-based stats. Identities = 29/105 (27%), Positives = 53/105 (50%) Query: 283 TDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKA 342 + V A+ +I + K I ++ V V ++ + L FK E+ +H +++KA Sbjct: 424 KNLIVKAAISFIEKNYNKNITLESVAKEVYVTPAYLSILFKRELKINFVDYLHKIRIQKA 483 Query: 343 RSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVN 387 + LL + L +++ M G+ +YF VFKK TP ++R+ N Sbjct: 484 QELLKNQNLKTYQVANMVGFSDEKYFSQVFKKYTGLTPSQFREAN 528 >UniRef50_C9L4P7 DNA-binding response regulator, AraC family n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L4P7_RUMHA Length = 549 Score = 148 bits (374), Expect = 4e-34, Method: Composition-based stats. Identities = 36/112 (32%), Positives = 55/112 (49%) Query: 272 IERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIH 331 + S TD V A Y+R + + + + + +GIS+ L FK++ G ++ Sbjct: 430 NTMENFHRGSKTDKIVEAAKEYVRENYGEKLTLAAIASKIGISQGYLSSVFKKQTGGNLN 489 Query: 332 AMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEY 383 I+ K+EKA+ LL + EIS M G+ + YF VFKK TP EY Sbjct: 490 DYINQMKIEKAKELLEKHEYMMYEISDMLGFENPYYFSKVFKKLTGITPSEY 541 >UniRef50_C3QA40 Putative uncharacterized protein n=3 Tax=Bacteroides RepID=C3QA40_9BACE Length = 288 Score = 148 bits (373), Expect = 4e-34, Method: Composition-based stats. Identities = 36/160 (22%), Positives = 68/160 (42%), Gaps = 3/160 (1%) Query: 233 SSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMH 292 + Q R G+ +L + ILV + + +S + + Sbjct: 130 EKILQLTRMQGFHTVLEFLSILYDLSTADRHILVSNLYDTKDTIRTSKS---RRIAKVCD 186 Query: 293 YIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLS 352 YI + + IK+ V V +S S F+++ T I+ ++ +A +L T+ + Sbjct: 187 YIEKNFEEPIKLGDVAALVNMSESAFSHFFRKKTNCTFIDYINNLRVARACQMLTETSHT 246 Query: 353 INEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSEVML 392 + EI CG+ +L F +FKK TP EYR + ++++ Sbjct: 247 VAEICYSCGFNNLSNFIRIFKKKKGNTPSEYRTILQQMLI 286 >UniRef50_C5RGS5 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RGS5_CLOCL Length = 293 Score = 148 bits (373), Expect = 5e-34, Method: Composition-based stats. Identities = 43/188 (22%), Positives = 83/188 (44%), Gaps = 17/188 (9%) Query: 198 ILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKE 257 + + + P ++ DN ++ L + + Q+G ++ + + Sbjct: 115 VKSIALLFEMRCP---FLLLKDNNDIYHSLKNIVI--------QLGMESEENQFSI---- 159 Query: 258 EMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSN 317 ++ +L+ +V S + S ++ + +A H+I + K I + + V I+ Sbjct: 160 QLLFYELLLKISKVAM--SNENTSTSNIYINKAKHFISMNYDKDITIKDISSYVNINEDY 217 Query: 318 LEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYD 377 L + FK+ G TI + ++EKA+ LL +T + I +I G S QYF VFKK Sbjct: 218 LNRIFKKHTGHTITEYVTLFRIEKAKMLLSNTDIPIIDICSYVGINSRQYFSQVFKKCTG 277 Query: 378 TTPKEYRD 385 +P +YR Sbjct: 278 ISPYKYRK 285 >UniRef50_C4G5N9 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G5N9_ABIDE Length = 513 Score = 148 bits (373), Expect = 5e-34, Method: Composition-based stats. Identities = 35/129 (27%), Positives = 64/129 (49%) Query: 260 PLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLE 319 ++RI + + + +A+ +I+ H + I ++Q+ ++ L Sbjct: 376 KMKRISLEYAGANIPDNEINEKELSQRIFKAVVFIQQHYNEPISLEQIAQEANLNPEYLS 435 Query: 320 KRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTT 379 + FKEE G A + +L+KA LLI+T + I++M GY ++ YF ++FKK Y Sbjct: 436 RVFKEETGYNYSAFLSNIRLKKAEYLLINTVEKVQNIAEMVGYSNVSYFSTIFKKKYGVN 495 Query: 380 PKEYRDVNS 388 P E+R N+ Sbjct: 496 PYEFRRNNA 504 >UniRef50_B0A7Q6 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A7Q6_9CLOT Length = 241 Score = 148 bits (373), Expect = 5e-34, Method: Composition-based stats. Identities = 28/106 (26%), Positives = 57/106 (53%) Query: 284 DPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKAR 343 +P + +A+ Y+ H K I + + + + +++S FK G T ++ ++EK++ Sbjct: 135 NPHIKKAIEYVHKHYDKSINITDLCEHLNLNKSYFCSTFKTTTGHTFCHFLNHFRIEKSK 194 Query: 344 SLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSE 389 LL+ T L++ +I+ G+ + Y+ ++FKK TP +YR N Sbjct: 195 KLLLETDLNMLDIALSVGFNNQNYYCTMFKKFTGKTPLQYRVCNKH 240 >UniRef50_D2LQR6 Transcriptional regulator, AraC family n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LQR6_BACS4 Length = 302 Score = 148 bits (373), Expect = 5e-34, Method: Composition-based stats. Identities = 49/197 (24%), Positives = 83/197 (42%), Gaps = 15/197 (7%) Query: 210 PEKLCVIGIDNEELTRYLSRVALSSVAQ-GARQMGYQAAKLLHRLLDKEEMPLQRILVPP 268 P IG D + L + S + + G L+ +L ++ L Sbjct: 92 PWTYIWIGFDGMKAESCLINASFSKENRVSKFECGETLVHYLNGMLSASKLTYSNDLKRE 151 Query: 269 VRVIERRSTDYRSLTDP--------------AVIQAMHYIRNHACKGIKVDQVLDAVGIS 314 + S + TD V A+ +I ++ K IKV + + +GI+ Sbjct: 152 GYLYMFLSALIQEKTDNNSDKPEVYDYPFLVYVEHALDFISHNYEKQIKVIDIAEYIGIN 211 Query: 315 RSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKK 374 RS L FK+ + + + +L+KA +LL +T L +NEI++ GY + F VFK Sbjct: 212 RSYLTTIFKKSLKVSPQEYLVKYRLDKACTLLKNTDLLVNEIARNVGYNNALTFSKVFKN 271 Query: 375 AYDTTPKEYRDVNSEVM 391 Y +PK YR + E++ Sbjct: 272 YYKMSPKTYRTQHQELV 288 >UniRef50_UPI0001789FEA two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789FEA Length = 560 Score = 147 bits (372), Expect = 5e-34, Method: Composition-based stats. Identities = 44/176 (25%), Positives = 80/176 (45%), Gaps = 6/176 (3%) Query: 222 ELTRYLSRVALSSVAQGARQMGYQAAKL-LHRLLDKEEMPLQRILVPPVRVIERRSTDYR 280 EL +LS V L+ + + Y ++ + L +EE L+P I ++ Sbjct: 381 ELYHFLSAVFLAHLHKNKDMRDYMNTQMNMDMLFRQEETASWTELIPYYWQIADCFFEWN 440 Query: 281 SLTD-----PAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIH 335 +L V + YI H I + + D V ++ S L + +K+ G + ++ Sbjct: 441 ALRGTELPAEVVNKVHRYIEEHIADDISLTAIGDYVSLNPSYLSRLYKQITGIGLSKYVN 500 Query: 336 AEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSEVM 391 + A+ +L++T++ +NEI+ GY S F FKK D TP+++R +E M Sbjct: 501 DYRNVIAKDMLLNTSMKVNEIAAKLGYNSALAFIRFFKKQNDMTPQDFRTARTETM 556 >UniRef50_A5ZVU5 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZVU5_9FIRM Length = 509 Score = 147 bits (372), Expect = 5e-34, Method: Composition-based stats. Identities = 41/179 (22%), Positives = 83/179 (46%), Gaps = 10/179 (5%) Query: 219 DNEELTRYLSRVALSSVAQGA-RQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRST 277 DN + + + S+V Q ++ + + L + E + R ++ + V E Sbjct: 328 DNTKYSAMYIKFVFSNVIQELFQENQFSGERRLEH--EIERLYNCRNIMEILEVTEDNIK 385 Query: 278 DYRSLTDP-------AVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETI 330 +Y + D V +YI H + + ++ + + V +S L FK+E G + Sbjct: 386 EYEAFLDRSMSSSRNEVAAVKNYIYQHYEEDLNLEMLAEKVYLSSGYLSFIFKKETGMNL 445 Query: 331 HAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSE 389 + I ++EKA+ LL ST + + ++S+ G+ ++ YF F++ Y ++P+ YR E Sbjct: 446 NRYIRVFRMEKAKELLCSTNMKVAQVSERVGFANVSYFCRSFREYYGSSPESYRKGTGE 504 >UniRef50_C6JD25 Response regulator receiver protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JD25_9FIRM Length = 519 Score = 147 bits (372), Expect = 6e-34, Method: Composition-based stats. Identities = 37/137 (27%), Positives = 63/137 (45%), Gaps = 1/137 (0%) Query: 250 LHRLLDKEEMPLQRILVPPVRV-IERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVL 308 L L + R+ IE+ + + A HYI H + I V + Sbjct: 378 LDALSKSLSSAGKEEACEITRMFIEQLIENDEEDVHYTISNARHYIDEHLAEDISVSSIA 437 Query: 309 DAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYF 368 +++ I+ + + FK GE + I +++EKA+SLL +T++ +I+ M GY YF Sbjct: 438 ESLYITPNYFSRLFKRITGEGCNEYIVRKRIEKAKSLLETTSIKTGKIAMMVGYRDTNYF 497 Query: 369 YSVFKKAYDTTPKEYRD 385 FKK +P +YR+ Sbjct: 498 SLAFKKHTGKSPTKYRE 514 >UniRef50_B1QZ71 Two-component response regulator n=2 Tax=Clostridium butyricum RepID=B1QZ71_CLOBU Length = 414 Score = 147 bits (372), Expect = 6e-34, Method: Composition-based stats. Identities = 35/100 (35%), Positives = 57/100 (57%) Query: 286 AVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSL 345 + A YI N+ K I + V D V +S++ L + FK+E+GE + + +++KA+ + Sbjct: 311 VIKLAKDYIINNYNKNISLKDVADEVYLSQNYLSELFKKEIGEGFYDFLSKYRIKKAKEV 370 Query: 346 LISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRD 385 L++T L + EI+QM GY F FKK TTP +R+ Sbjct: 371 LLTTNLKVYEIAQMVGYNDSITFGRAFKKITGTTPNNFRN 410 >UniRef50_C6J2H9 Response regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J2H9_9BACL Length = 535 Score = 147 bits (372), Expect = 6e-34, Method: Composition-based stats. Identities = 45/137 (32%), Positives = 71/137 (51%), Gaps = 2/137 (1%) Query: 256 KEEMPLQRILVPPVRVIE--RRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGI 313 +E M L+ +L V +IE R S + T+ ++ A +YI+NH + ++ + D +GI Sbjct: 398 REPMSLKELLSIIVSLIEHARSSLSAKKSTELLMMSAQNYIQNHLGRDFGIEDIADYLGI 457 Query: 314 SRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFK 373 S S FK GET + +++E A+ LL ++ SI +I GY +YF VF+ Sbjct: 458 SSSYFCLLFKNHFGETFVEYLTKQRMEMAKCLLRTSERSIAQIGSSIGYQERRYFTKVFQ 517 Query: 374 KAYDTTPKEYRDVNSEV 390 K TP +YR S V Sbjct: 518 KYTGMTPSDYRQKESNV 534 >UniRef50_C6JBV9 Two component transcriptional regulator n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JBV9_9FIRM Length = 527 Score = 147 bits (371), Expect = 6e-34, Method: Composition-based stats. Identities = 30/112 (26%), Positives = 52/112 (46%) Query: 275 RSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMI 334 + + D V ++YI H + I + D V ++ L + FK++ +I I Sbjct: 416 EYNSFINEKDSVVDIVLNYIHQHYSEDISRTMLADMVYLNPDYLARLFKKQTQTSIINYI 475 Query: 335 HAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDV 386 +LEKA+ LL++ + + ++ GY + YF +FK TP EYR Sbjct: 476 TTYRLEKAKELLLNPDIPVGTVALKVGYGNYSYFSKLFKDVVGCTPNEYRKK 527 >UniRef50_B1B7W8 Transcriptional regulator, AraC family protein n=1 Tax=Clostridium botulinum C str. Eklund RepID=B1B7W8_CLOBO Length = 769 Score = 147 bits (371), Expect = 6e-34, Method: Composition-based stats. Identities = 42/126 (33%), Positives = 61/126 (48%), Gaps = 1/126 (0%) Query: 265 LVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGI-KVDQVLDAVGISRSNLEKRFK 323 L I S V +A +YI + + V+ V + V IS + L FK Sbjct: 644 LDLYETTINTLSDKKLYKNTETVEKAKNYIEKNYTNSLLSVELVSEYVNISPNYLRTLFK 703 Query: 324 EEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEY 383 GE+I I+ + E A+ LLI+T L+I +IS GY + YFY+ FKK Y +P ++ Sbjct: 704 NITGESISKYINICRFENAKKLLINTDLTILDISSKVGYSNNNYFYTAFKKTYGISPSQF 763 Query: 384 RDVNSE 389 R N E Sbjct: 764 RRNNKE 769 >UniRef50_C4ZBY2 Two-component response regulator n=4 Tax=Clostridiales RepID=C4ZBY2_EUBR3 Length = 534 Score = 147 bits (371), Expect = 7e-34, Method: Composition-based stats. Identities = 39/176 (22%), Positives = 75/176 (42%), Gaps = 8/176 (4%) Query: 211 EKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVP-PV 269 + V+ EL L +S+ A+++ +L + L + E + L++ L+ Sbjct: 357 YHVAVM-----ELISELYHF-MSNNELNAQEISGSVGRLYNELSNFEPVVLKQWLLDFSS 410 Query: 270 RVIERRSTDYRSLTDPAVIQAMHYIRNHACK-GIKVDQVLDAVGISRSNLEKRFKEEVGE 328 R+ + + + + A Y+ + + +D +G+S S FK+E G Sbjct: 411 RLHDDMADARYNSKKSLIDSAKDYVHRNYRSVDLGLDDTCKELGVSNSYFSSLFKKETGS 470 Query: 329 TIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 + + +++KA +L+ T I+Q GY YF VFK+ Y +P YR Sbjct: 471 SFVEYLTDYRMDKAARMLVETDDKSYVIAQNVGYADPNYFSYVFKRKYGVSPSRYR 526 >UniRef50_A9U7E9 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U7E9_PHYPA Length = 399 Score = 147 bits (371), Expect = 7e-34, Method: Composition-based stats. Identities = 65/271 (23%), Positives = 109/271 (40%), Gaps = 21/271 (7%) Query: 126 GLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQN----RLADWLQTL 181 GL + A E AF Q +AE + + + E R + Q + Sbjct: 137 GLRKDDWTAIADSTEEAF-QALAERREPDANHPCVYVYTEAGFRHPAARNVRPVRFFQEM 195 Query: 182 PPQTGIIAVTDARARHILQVCEHLHIPV----PEKLCVIGIDNEELTRYLSRVALSSVAQ 237 + + RA L+ V P +L +G T+ ++ ++ + Sbjct: 196 A--DAVRTFDEPRALLALEDFASSDSGVAQLSPGELAALG------TQLIAILSFTLYDS 247 Query: 238 GARQMGYQAAKLLHRLLDKEEMPLQ--RILVPPVRVIERRSTDYRSLTDPA-VIQAMHYI 294 G + L + L E Q + V+ I RR T +L V + YI Sbjct: 248 GHKLDDELPPADLSKELGLIENAQQWKAWVAEKVKRICRRFTPNENLKHKETVEFIIQYI 307 Query: 295 RNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSIN 354 H + I + V D V IS++ L F++ GET + ++EKA+S+++ L I Sbjct: 308 HEHYAENIHLQDVADQVYISKNYLSTLFRQFTGETFGDYLTRVRMEKAKSMVLEKKLLIA 367 Query: 355 EISQMCGYPSLQYFYSVFKKAYDTTPKE-YR 384 EI++ GY ++ YF ++FKK +P E YR Sbjct: 368 EIAERVGYRNVPYFTTLFKKHTGRSPTEFYR 398 >UniRef50_C6LII8 Two-component response regulator n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LII8_9FIRM Length = 502 Score = 147 bits (371), Expect = 7e-34, Method: Composition-based stats. Identities = 39/170 (22%), Positives = 68/170 (40%), Gaps = 3/170 (1%) Query: 222 ELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEE---MPLQRILVPPVRVIERRSTD 278 E L R + A+ G EE + R ++ + Sbjct: 333 ESLCGLCRDTFELLEFEAKGNGISLTGTDILREQMEECISLEEARRIMEAFAGQCHLTEL 392 Query: 279 YRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEK 338 + + A+ YI H + + ++QV +V ++ + FK E G+T + + Sbjct: 393 QNAPKSKNIQLAVEYINAHYAEQLSLEQVAASVYLNPDYFSRAFKMETGQTFVNYLTDVR 452 Query: 339 LEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNS 388 L ++ LL +T L + I+Q GY + YF ++FKK Y +P EYR Sbjct: 453 LSRSVWLLENTALRVQMIAQQVGYYNASYFSTIFKKKYGMSPYEYRRKEK 502 >UniRef50_A3CL13 AraC-type DNA-binding domain-containing protein, putative n=1 Tax=Streptococcus sanguinis SK36 RepID=A3CL13_STRSV Length = 282 Score = 147 bits (371), Expect = 7e-34, Method: Composition-based stats. Identities = 50/193 (25%), Positives = 83/193 (43%), Gaps = 12/193 (6%) Query: 210 PEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLL-HRLLDKE------EMPLQ 262 P +G+ L RYL + L S Q K L L E E+ LQ Sbjct: 86 PWSYVWMGLGGRLLPRYLQDLGLQSGQWSFELTSLQEFKALVFESLAYEGSGITAELALQ 145 Query: 263 RILVPPVRVIERRSTDYRSLT-----DPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSN 317 R + + ++ +R +T +P V Q + + +H + + V ++ + + S Sbjct: 146 RQVYRFLELLSQRLKQTSLITESRRVNPYVQQVLELLSSHLPESLSVQELAQKLALHPSY 205 Query: 318 LEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYD 377 L + FK+EVG+ I + +L A LL + LS+ EI+ G+ Q F FKKA Sbjct: 206 LSRLFKDEVGKGIKEYSNDLRLNMAADLLTGSQLSVEEIANKTGFAGTQSFSKAFKKARG 265 Query: 378 TTPKEYRDVNSEV 390 +P +R +S + Sbjct: 266 QSPLNFRKASSHL 278 >UniRef50_UPI0001C36195 two component transcriptional regulator, AraC family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C36195 Length = 145 Score = 147 bits (371), Expect = 7e-34, Method: Composition-based stats. Identities = 32/98 (32%), Positives = 46/98 (46%) Query: 286 AVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSL 345 +I YI + + V + G++ S L FKE G I + I ++EKA +L Sbjct: 25 VIISIREYIEKNYDDSLNVADLARKYGLNVSYLSTLFKERTGINITSYIEGIRMEKAMNL 84 Query: 346 LISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEY 383 L T + E++ GY + YF VFKK TP EY Sbjct: 85 LRETNWKVTEVAFHVGYSNSGYFSRVFKKYTGVTPGEY 122 >UniRef50_Q0SVP8 Transcriptional regulator, AraC family n=3 Tax=Clostridium RepID=Q0SVP8_CLOPS Length = 284 Score = 147 bits (371), Expect = 7e-34, Method: Composition-based stats. Identities = 44/188 (23%), Positives = 83/188 (44%), Gaps = 12/188 (6%) Query: 210 PEKLCVIGIDNEELTRYL-------SRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQ 262 P I + + +YL + + ++ L+R+ E+ +Q Sbjct: 93 PWTYMWIAFNGIKAKKYLNYANLNEDNLIFEYTEDDSLEIYINRMFELNRMNYSNELEIQ 152 Query: 263 RILVPPVRVI----ERRSTDYRSLTDPAVIQAMHYIRNHA-CKGIKVDQVLDAVGISRSN 317 +L + + S +++D V +A+ +++N+ +K+ V + VG++RS Sbjct: 153 GLLYLFLSKLAMSKNENSLKSNNISDFYVEKAIEFMQNNYLNPDLKITDVANFVGLNRSY 212 Query: 318 LEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYD 377 L FK+ + + + ++ +A SLL +T LS+ IS+ GY F VFKK Sbjct: 213 LTHLFKKSLKLSPQEFLLNYRINEATSLLKNTNLSVGTISKSIGYNDQLTFSKVFKKVKG 272 Query: 378 TTPKEYRD 385 +PK YRD Sbjct: 273 ISPKTYRD 280 >UniRef50_B8I9A3 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulolyticum H10 RepID=B8I9A3_CLOCE Length = 307 Score = 147 bits (371), Expect = 7e-34, Method: Composition-based stats. Identities = 47/177 (26%), Positives = 88/177 (49%), Gaps = 5/177 (2%) Query: 218 IDNEELTR-YLSRVALSSVAQGARQMGYQAAKLLHRLLDKE--EMPLQRILVPPVRVIER 274 ++N E R ++ R V ++GY L+ L K+ + L RIL + V Sbjct: 101 LNNSETYRGFIDRKEDFLVLNDNGKVGYALKDLISELEKKKSSDQFLLRILFFRMLVEFT 160 Query: 275 RSTDYRS--LTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHA 332 R+ S L + +A YI H + + V+ + + GI+ S L+ F ++ I A Sbjct: 161 RNIGQDSHYLGSLHLRKAQKYINEHLYEDLNVEMIAEYTGINHSYLQTLFSKQFNCGIIA 220 Query: 333 MIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSE 389 ++ ++E A LL ++ +SI +++ GY S Q+F +F+K Y+ +P++YR + + Sbjct: 221 YVNKLRMEHAAFLLNNSNMSITDMAFHLGYNSRQHFGYIFEKHYNMSPQQYRKLKGQ 277 >UniRef50_A9KJM4 Two component transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KJM4_CLOPH Length = 517 Score = 147 bits (371), Expect = 7e-34, Method: Composition-based stats. Identities = 32/113 (28%), Positives = 57/113 (50%) Query: 271 VIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETI 330 V++ + + A+ + + Y+ H + I +++V + IS + FKE++G T Sbjct: 398 VLKSVRDNQDENSFAAIRKVLRYVDTHYDEDITLEEVAGILNISPQYFSRIFKEKMGVTY 457 Query: 331 HAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEY 383 + +++KA+ LI + +I EI M GY YF VFKK TPK++ Sbjct: 458 VDYLTNIRIKKAQEWLIYSDKNIQEICYMVGYKDPNYFSRVFKKTVGVTPKQF 510 >UniRef50_C8P1S0 AraC family DNA-binding response regulator n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P1S0_ERYRH Length = 497 Score = 147 bits (371), Expect = 8e-34, Method: Composition-based stats. Identities = 41/167 (24%), Positives = 82/167 (49%), Gaps = 2/167 (1%) Query: 220 NEELTRYLSRVALSSVAQGARQMGYQAAK-LLHRLLDKEEMPLQRILVPPVRVIERRSTD 278 + E RY+ V S + + +G Q LLH L + + R ++ + R Sbjct: 322 DPEYVRYIGFVIFSDIYRQHESVGSQMYHDLLHELNKCDSIAEIREVLHHA-LEATRYDQ 380 Query: 279 YRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEK 338 +P + + + + + I + + D + ++ L + FK+E ++ ++ + Sbjct: 381 VLKQHNPNIQKVLQIVLKDYAQDITISSIADTLHMNAMYLGQLFKKETNKSFSQYLNHFR 440 Query: 339 LEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRD 385 +++A++LL+ + +INEI+++ GY S YFY FKK +PKEYR+ Sbjct: 441 IKEAQNLLLKSNHNINEIAELVGYTSSGYFYKNFKKECGISPKEYRE 487 >UniRef50_B0C7G2 Transcriptional regulator, AraC family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C7G2_ACAM1 Length = 311 Score = 147 bits (371), Expect = 8e-34, Method: Composition-based stats. Identities = 37/179 (20%), Positives = 80/179 (44%), Gaps = 9/179 (5%) Query: 219 DNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVP-PVRVIERRST 277 D ++ R+ ++ + +G + L+ L + + + ++ + +++R T Sbjct: 133 DLTQVNRFELLPNIAVQDRLIYDIGTALRQELNTLEFTDHLYIDSLVTALSIHLMKRYCT 192 Query: 278 DYRSLTDP--------AVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGET 329 L D + +A+ YI +H + +K+ + VG+SR + FK+ +G Sbjct: 193 QVPRLKDSSDQGLPPALLNRALEYINDHLDQNLKLVDLAQEVGMSRYYFSRLFKKSMGVA 252 Query: 330 IHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNS 388 H ++++KA+ LL T I I++ CG+ + + F++ TPK +RD Sbjct: 253 PHQYAIKQRIKKAKGLLRQTNTPIAMIARQCGFTNPSHLSKYFRQLTGVTPKAFRDQYR 311 >UniRef50_B0K339 Response regulator receiver protein n=9 Tax=Thermoanaerobacterales RepID=B0K339_THEPX Length = 365 Score = 147 bits (371), Expect = 8e-34, Method: Composition-based stats. Identities = 35/117 (29%), Positives = 57/117 (48%), Gaps = 1/117 (0%) Query: 271 VIERRSTDYRSLTDPAVIQAMHYIRNHACK-GIKVDQVLDAVGISRSNLEKRFKEEVGET 329 V E S S + +A+ I+ + I ++ + + + I+ + L FK E+G T Sbjct: 247 VCEYVSLTKNSKNRKLIDEAIKLIQENYSDLNISLNSIAEKLYITPNYLSTLFKSEMGVT 306 Query: 330 IHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDV 386 + A ++EKA+ LL + I E+++ GY YF VFK TPKEYR+ Sbjct: 307 FSDYLTACRIEKAKELLKDVKVKIYEVAEAVGYTDQHYFSKVFKNITGFTPKEYREK 363 >UniRef50_C6D078 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D078_PAESJ Length = 544 Score = 147 bits (370), Expect = 8e-34, Method: Composition-based stats. Identities = 39/157 (24%), Positives = 79/157 (50%), Gaps = 1/157 (0%) Query: 233 SSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVI-ERRSTDYRSLTDPAVIQAM 291 S + + RQ G + LL +EE L + + ++ I E + S V +A+ Sbjct: 379 SDIGEANRQFGSEQKLWEQLLLCREERELLQETIRIIKEISEFIADRRMSHAQIVVQKAI 438 Query: 292 HYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTL 351 Y+ H + + + V ++V +S + L F+ E+GE+ + ++++A+ +L + Sbjct: 439 EYMCAHYKENLSLRSVAESVFLSPNYLGALFRTELGESFTDQLIRIRIQRAKDMLKNPEF 498 Query: 352 SINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNS 388 + E++ GY ++ YF +FK+ +PKEYRD++ Sbjct: 499 KLYEVADQIGYQNMGYFTGLFKRMTGLSPKEYRDLHG 535 >UniRef50_B8I0Y2 Two component transcriptional regulator, AraC family n=1 Tax=Clostridium cellulolyticum H10 RepID=B8I0Y2_CLOCE Length = 531 Score = 147 bits (370), Expect = 9e-34, Method: Composition-based stats. Identities = 37/164 (22%), Positives = 66/164 (40%) Query: 223 LTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSL 282 + Y R+ S + + L IL V + + + + Sbjct: 368 IASYCYRLVASYKLFAPELADSEPEVYKQIQSSRNIQNLLNILRQLVENVSQVVENNGNK 427 Query: 283 TDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKA 342 V + YIR++ K I + + D + ++ S L + +K+E GE+I I+ ++E A Sbjct: 428 FSCLVKETQKYIRDNYNKNISLQSIADHIHVNSSYLSRLYKKETGESIVDAINKYRIENA 487 Query: 343 RSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDV 386 + LL + E++ G YF VF K +PKEY+ Sbjct: 488 KKLLKDPVYKVFEVACAVGIEDPAYFTHVFTKYTGMSPKEYKSK 531 >UniRef50_A8RMQ2 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RMQ2_9CLOT Length = 502 Score = 147 bits (370), Expect = 9e-34, Method: Composition-based stats. Identities = 32/122 (26%), Positives = 56/122 (45%), Gaps = 1/122 (0%) Query: 270 RVIERRSTDYRSLTDPAVIQAMHYIRNHACK-GIKVDQVLDAVGISRSNLEKRFKEEVGE 328 R+ E + + V++A+ Y+ + + ++ A G+S + FK E G Sbjct: 377 RICEYVGSQKSGVYSRPVVKALAYMEENYSSPDLSMEDTAVAAGLSSARFSTSFKSETGV 436 Query: 329 TIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNS 388 T + ++EKA+ L+ I EI+ M GY ++ YF + FKK P EYR+ Sbjct: 437 TFTDYLLKLRMEKAKDLMRDPNRKIYEIAMMTGYSNIPYFSTAFKKYTGCPPSEYREKQH 496 Query: 389 EV 390 + Sbjct: 497 GL 498 >UniRef50_C6LGW7 DNA-binding response regulator n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LGW7_9FIRM Length = 504 Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats. Identities = 30/127 (23%), Positives = 61/127 (48%) Query: 261 LQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEK 320 L+ + +I + + + +A+++IR H + I ++ + + + I+ L Sbjct: 378 LEDCFRREIEIILSEKDKKEDIRNYTIRRAINFIREHYRENISLELLAEHLEITPEYLST 437 Query: 321 RFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTP 380 F +EVG + ++ A+ LL ++ I EIS+ GY +YF VFK+ +P Sbjct: 438 LFNKEVGINFTTFLKRFRISHAKRLLKGSSKKIYEISEEVGYHDPKYFNRVFKEEVGVSP 497 Query: 381 KEYRDVN 387 +YR ++ Sbjct: 498 GDYRQMS 504 >UniRef50_A8SBA6 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SBA6_9FIRM Length = 286 Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats. Identities = 45/185 (24%), Positives = 79/185 (42%), Gaps = 11/185 (5%) Query: 210 PEKLCVIGIDN---EELTRYLSRVALSSVAQGARQMGYQAA----KLLHRLLDKEEMPLQ 262 P + +G + +L L + V + G +AA L ++E + Sbjct: 87 PWEYSWVGFNGACAHKLAAQLPFTDDAPVHHTSDPDGMRAALTNIYSSRGLQPQDEAAMV 146 Query: 263 RILVPPVRVIERR----STDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNL 318 L + + R S + V+ A+ YI+ + I +D V +VG+SRS+L Sbjct: 147 GYLYLFIAALMRETSAGKPHTASSSSQYVLNAIKYIQFNYSHDISIDDVAKSVGVSRSHL 206 Query: 319 EKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDT 378 + F VG++ + ++ +A LL + LSI E++ G+ YF VFK+A Sbjct: 207 YRVFMLNVGKSPIDYLTEYRINEACKLLRAGNLSIAEVAVSVGFFDQFYFSRVFKRAKGV 266 Query: 379 TPKEY 383 P +Y Sbjct: 267 PPSKY 271 >UniRef50_UPI0001789626 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789626 Length = 305 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 49/178 (27%), Positives = 79/178 (44%), Gaps = 13/178 (7%) Query: 207 IPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILV 266 + P + V+ D EE+ L + L +G G L ++LV Sbjct: 122 LKRPFRYLVLA-DQEEVYPVLKSLVLELDQRGTD--GRMMTHAL----------FIQLLV 168 Query: 267 PPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEV 326 R+ E R +D + +++ Y+ + + I+V V V + L + F+ Sbjct: 169 CIARLYEERERSDMQQSDFYIKRSVDYLHQNYDRQIQVKDVAAEVNLHPGYLHRVFRRGT 228 Query: 327 GETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 G TI + ++EKA+ LL T + I+EIS G S QYF+ +FKK +TP EYR Sbjct: 229 GRTITEYLTTIRMEKAKMLLEQTDIPIHEISDYVGVGSRQYFHMLFKKYTGSTPVEYR 286 >UniRef50_B1R4J4 Response regulator receiver protein n=3 Tax=Clostridium perfringens RepID=B1R4J4_CLOPE Length = 524 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 46/189 (24%), Positives = 86/189 (45%), Gaps = 10/189 (5%) Query: 211 EKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLL---------DKEEMPL 261 E L V+ + + Y+S + + + GY L++ + E + Sbjct: 336 ESLFVVNVYDVNPKCYISTILNEIIEIIIKLYGYDVYNLINSKIGLSRYIYEVKDTEALV 395 Query: 262 QRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKR 321 I+ + E ++ + + V Q YI + + + V ++ + ++ S L Sbjct: 396 NFIVKFIEEIYEIKNIKKVNNENIPV-QVKKYIEKNYSEDLSVKKLAELFNVNYSYLSAI 454 Query: 322 FKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPK 381 F +E+GE++ + I ++ KA+ LL +T+ I I++ GY LQYFY VFKK TP Sbjct: 455 FTKEIGESVVSYITKVRIMKAKKLLENTSADIGTIAESVGYSDLQYFYRVFKKNTQKTPM 514 Query: 382 EYRDVNSEV 390 YR++ +V Sbjct: 515 SYRNITKKV 523 >UniRef50_A7VRD3 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VRD3_9CLOT Length = 277 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 36/121 (29%), Positives = 64/121 (52%), Gaps = 1/121 (0%) Query: 264 ILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFK 323 +LV +R+I R + + + + Y+ + I +D + + V IS+ L FK Sbjct: 154 LLVLVMRLI-RINPEDEAALSQECQKIKEYLDQNFTSPITLDSLSETVYISKHYLSHLFK 212 Query: 324 EEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEY 383 E+ G + + ++++EKA LL T L ++E+S+ GY + YF VFK+ Y +P +Y Sbjct: 213 EQTGVSPIKYLTSKRMEKACELLSETELPVSEVSKAVGYENPLYFSQVFKRIYGISPVKY 272 Query: 384 R 384 R Sbjct: 273 R 273 >UniRef50_B8HZZ5 Two component transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=B8HZZ5_CLOCE Length = 519 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 35/150 (23%), Positives = 65/150 (43%), Gaps = 1/150 (0%) Query: 240 RQMGYQAAKLLHRLLDKEEMP-LQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHA 298 + G A L L+ + L+ V I + + + A +I Sbjct: 367 KTTGNSADGRLETLISTLQTNDLENCCVFTEMFIVKLMYTNKKQMHEIIEAATVFINKRL 426 Query: 299 CKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQ 358 + + V + + ++R+ + FK+E+GE + I +++EKA+ LL + L E+++ Sbjct: 427 TEDLTVFTLAEQFHVARNYFSRLFKKEMGEGCNEYITRKRIEKAKHLLTVSRLKTYEVAE 486 Query: 359 MCGYPSLQYFYSVFKKAYDTTPKEYRDVNS 388 GY YF FKK +P E+RD + Sbjct: 487 QVGYNDTNYFSLAFKKNTGMSPTEFRDRQN 516 >UniRef50_UPI0001C362BB response regulator receiver protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C362BB Length = 482 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 30/106 (28%), Positives = 54/106 (50%) Query: 284 DPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKAR 343 V + YI+NH + I ++ + + +S + L ++F + G +I + + ++ A Sbjct: 376 SEIVDNVIRYIKNHYKEDINLNVLANEFFLSPAYLSRKFSQTTGVSIMSYLEDYRINVAT 435 Query: 344 SLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSE 389 LL + SI+EI+ GY YF +FKK TPKE+R ++ Sbjct: 436 DLLKGSERSISEIADQVGYYDANYFTKIFKKVKGITPKEFRKMSKS 481 >UniRef50_A6M2F4 Response regulator receiver protein n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6M2F4_CLOB8 Length = 531 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 29/107 (27%), Positives = 55/107 (51%) Query: 283 TDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKA 342 + + +A YI +H + I V + + + ++ + K FK GE + I ++++KA Sbjct: 412 SHEIIRKAKQYINDHLNEDISVYSIAEMLYLTPTYFSKLFKHSTGEGCNNYIIRKRIQKA 471 Query: 343 RSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSE 389 +SLL +T++ +I+ + GY YF FKK +P E+R+ Sbjct: 472 KSLLETTSMKTGKIATLVGYKDTNYFSLAFKKQTGMSPTEFREKGGS 518 >UniRef50_A8RIR6 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RIR6_9CLOT Length = 370 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 32/105 (30%), Positives = 56/105 (53%) Query: 286 AVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSL 345 V +A+ YI+ H + + +D V + + +S L F +G T I + +++KA+ L Sbjct: 262 YVNKAIQYIQAHYNENLSLDSVANEIELSSPYLSSLFSRILGTTFVNYIQSVRIQKAKEL 321 Query: 346 LISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSEV 390 L TT+ + EI+ GY +YF VF+K TP ++R +S + Sbjct: 322 LCGTTMKVYEIAYCIGYDDEKYFSQVFRKTEGITPSQFRAQSSSI 366 >UniRef50_UPI00017895AE two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI00017895AE Length = 353 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 61/348 (17%), Positives = 125/348 (35%), Gaps = 40/348 (11%) Query: 43 EDFRARIDKIKDWLGDGVIADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIAT- 101 ED ++ +++ D ++ D +++ G+ + ES+ +H+I Sbjct: 35 EDGVEALEMLENSRPDIIVTDICMPEMD-----------GLEFIRRVRESHAQMHFIILS 83 Query: 102 --DNYALVESAFLHLKEKGVNRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQG 159 DN+ A + GV+ F + + ER E R + Sbjct: 84 GHDNFEFARQAMRY----GVSDF-LLKPIDPAQFHATLER------ACRELDERKARFSR 132 Query: 160 LETAPENWQHAQNRLADWLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGID 219 Q + RLA+ L + + + + A + E + P+++ + Sbjct: 133 QTKWTLAQQRHKARLAELLWSAEEREALEQTHEIMA-----LFETMG---PKEVSLSRYA 184 Query: 220 NEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDY 279 + ++ LS + + Q A+ L ++ ++ Sbjct: 185 HMLISELLSALEERGLMLNMDTGEEQWAQ--DDPLACRRQTEDKV----KEMLALIKGSR 238 Query: 280 RSLTDPAVIQAMHYIRNHAC-KGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEK 338 + + +A +I + + + + +V D+VG+S + L + FK E + + Sbjct: 239 NLGSRHNIQKAKRFIEENYAMEDLSLQEVADSVGMSVTYLSRTFKSETNMNFVKYLVQVR 298 Query: 339 LEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDV 386 +EKAR LL + LS E + G+ +F FKK + TP YR Sbjct: 299 MEKARELLAESELSAQEAAYRVGFSDYVHFSKTFKKFHGLTPSAYRKQ 346 >UniRef50_A4XMH2 Two component transcriptional regulator, AraC family n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XMH2_CALS8 Length = 476 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 28/165 (16%), Positives = 73/165 (44%), Gaps = 2/165 (1%) Query: 228 SRVALSSVAQGARQMGYQAAKLLHRLLD--KEEMPLQRILVPPVRVIERRSTDYRSLTDP 285 ++++L + + + + + L+ + + ++ + ++ Sbjct: 308 NQLSLYLNKLNPSEYSDMSIMEYDEIANTFCNIENMSEYLLERIEGVITKNKQFEYCSNE 367 Query: 286 AVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSL 345 ++ + YI NH + + + ++ IS + + F++ +G + + +++KA L Sbjct: 368 NFLKLIEYIDNHYSEPLSLKELSAKFFISLNYCCELFRKVIGCSFTEYLTNLRMKKAEEL 427 Query: 346 LISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSEV 390 L +T S+ EI+++ GY +F FKK Y T P +R + ++ Sbjct: 428 LKTTNYSVAEIARLVGYNDYYHFNKAFKKFYGTPPATFRKKHFQI 472 >UniRef50_C0D691 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D691_9CLOT Length = 253 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 34/103 (33%), Positives = 55/103 (53%) Query: 288 IQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLI 347 +AM YI + + + + V V + + FK++ G + + + ++EKAR LL Sbjct: 151 KRAMEYIDRYFYQELTLAGVAKEVHMHPNYFGNLFKKKTGVSYLTYLTSVRMEKARELLD 210 Query: 348 STTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSEV 390 + L + E+ Q+ GY S ++F VFKK + TP EYRD N V Sbjct: 211 NPNLKVYEVGQIVGYYSPKHFSKVFKKHTNMTPNEYRDRNKHV 253 >UniRef50_C3RN82 Transcriptional regulator n=2 Tax=Bacteria RepID=C3RN82_9MOLU Length = 267 Score = 146 bits (368), Expect = 1e-33, Method: Composition-based stats. Identities = 41/189 (21%), Positives = 81/189 (42%), Gaps = 12/189 (6%) Query: 210 PEKLCVIGIDNEELTRYLSRVALSSVAQ-------GARQMGYQAAKLLHRLLDKEEMPLQ 262 P I D + +YL R L + A ++L E+ +Q Sbjct: 62 PWTYLWISFDGSKTRQYLKRCNLDEHNLVVHCDYINELRETTIAILAHNKLSYSNELFIQ 121 Query: 263 RILVPPVRVIERRSTDYRSLT-----DPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSN 317 L + + + + +P V +A+ YI+N+ + + V+++ D + ++RS Sbjct: 122 GQLYTFFSFLAKSANITYNDNVAPNYNPYVDKAIEYIQNNYQEMVTVNEIADYLSLNRSY 181 Query: 318 LEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYD 377 L FK+ + + + ++ +A LL +T L+IN+I+ CGY + F F ++ Sbjct: 182 LTTLFKKHLHLSPQEFLLKYRMMRAEDLLTNTDLTINQIAFSCGYSNQLSFSKAFSNSHQ 241 Query: 378 TTPKEYRDV 386 P++YR Sbjct: 242 MAPRDYRKQ 250 >UniRef50_C7IE87 Transcriptional regulator, AraC family n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IE87_9CLOT Length = 329 Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats. Identities = 31/117 (26%), Positives = 57/117 (48%) Query: 269 VRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGE 328 + E+ +D + + + A+ YI + + I ++ + IS S K F+ +G+ Sbjct: 210 TGISEKNKSDISNRENIILKPALDYIEKYYTRNISLNNMASLCNISTSYFSKLFRRTIGD 269 Query: 329 TIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRD 385 I+ +++KAR LL +T + I I+ G+ YF VFKK TP ++R+ Sbjct: 270 NFSNHINRIRIKKARELLETTDIPITNIALDLGFEDSGYFIKVFKKFEGVTPSKFRN 326 >UniRef50_A6CLV0 AraC-type DNA-binding domain-containing protein n=1 Tax=Bacillus sp. SG-1 RepID=A6CLV0_9BACI Length = 525 Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats. Identities = 32/122 (26%), Positives = 62/122 (50%) Query: 267 PPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEV 326 +++ S ++ + Y++ + + I + ++ D +SR + ++FK++ Sbjct: 401 EFKELVKILSDAKYQKEKNSMQRIEEYLQKNYQEDINLQEIADRFYLSREYISRKFKQDY 460 Query: 327 GETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDV 386 TI + + ++EKA++LL + L I E++ GY + +YF VFKK TP EYR Sbjct: 461 DATITDYLTSIRMEKAKNLLKNPYLKIYEVAYGVGYQNEKYFSKVFKKHEGVTPNEYRQS 520 Query: 387 NS 388 S Sbjct: 521 YS 522 >UniRef50_B8I0K9 Two component transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=B8I0K9_CLOCE Length = 532 Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats. Identities = 38/117 (32%), Positives = 60/117 (51%), Gaps = 1/117 (0%) Query: 270 RVIERRSTDYRSLTDPAVIQAMHYIRNHACKG-IKVDQVLDAVGISRSNLEKRFKEEVGE 328 +++E R T D + +A YI+++ I ++ V V +S S+ F +E GE Sbjct: 414 KILEFRDTRVEKKYDSIINKAKEYIQSNFSNSAISLNSVSSYVNVSPSHFSTIFSQEAGE 473 Query: 329 TIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRD 385 + +++KA LL +T+L +EI+ GY YF +FKKA TPKEYR Sbjct: 474 NFIEYLTKVRVKKAMELLKTTSLKSSEIAYSVGYNDPHYFCYIFKKAIGVTPKEYRS 530 >UniRef50_Q5WK40 Two-component response regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WK40_BACSK Length = 407 Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats. Identities = 31/103 (30%), Positives = 56/103 (54%) Query: 283 TDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKA 342 + ++ Y+ H + + +V D + ++ + L KRFKEE GE IH ++++A Sbjct: 304 KEQLAVRVYEYVEAHFFEQPSLQEVADHLFLNAAYLSKRFKEETGEKFSDYIHRLRMDRA 363 Query: 343 RSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRD 385 LL T + +++I++ GY YF VFK+ + TP+E+R Sbjct: 364 VELLAETNMKVSQIAKKLGYKDASYFIKVFKREFHMTPQEFRS 406 >UniRef50_C6J7M7 Response regulator n=2 Tax=Bacillales RepID=C6J7M7_9BACL Length = 531 Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats. Identities = 40/175 (22%), Positives = 78/175 (44%), Gaps = 11/175 (6%) Query: 212 KLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRV 271 +L V+ E LS +L + Q + +G L ++ + R + Sbjct: 366 ELTVVMFRQYEQMHLLSEWSLEGLLQELQSLG-----TLSEMIGLLKANFGR------WI 414 Query: 272 IERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIH 331 E R + + + + YI ++ K + +++V + +S S+ FK+ G T Sbjct: 415 SESRESQIKDNVQNVIAKTQEYILSNYHKDLSMEEVAERADLSISHFCLLFKQVTGYTFL 474 Query: 332 AMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDV 386 + ++EKA+ +L ++ + + +++ M GY +YF VFKK TP EYR+ Sbjct: 475 EYLTECRIEKAKYILKNSQVKVYQVAPMVGYQDPRYFTQVFKKVTGMTPTEYREA 529 >UniRef50_C6D3W5 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3W5_PAESJ Length = 421 Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats. Identities = 47/189 (24%), Positives = 80/189 (42%), Gaps = 12/189 (6%) Query: 195 ARHILQVCEHLH-IPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRL 253 A H E L + + IG+D +R L +++ + L L Sbjct: 240 ALHTASAAERLGGLIINYLKSYIGLD--------ARFGLGRTKDSWQEIKASCDEALQGL 291 Query: 254 LDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGI 313 L+ + Q + E AV + Y+ H + I ++Q+ + I Sbjct: 292 LEDPDREQQ---AEEPQATELSFNTIHEKHRKAVQYMIEYVHTHYAEDITLEQLASQLYI 348 Query: 314 SRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFK 373 S++ L + FK+ GET + ++EKA+ LL+ I E+S+M GY ++ YF ++FK Sbjct: 349 SKNYLNQLFKKVTGETFTNYVIRVRIEKAKVLLLEGKHLIYEVSEMVGYQNVPYFTTLFK 408 Query: 374 KAYDTTPKE 382 K TP E Sbjct: 409 KYCGVTPSE 417 >UniRef50_UPI0001789620 two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789620 Length = 540 Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats. Identities = 63/334 (18%), Positives = 122/334 (36%), Gaps = 25/334 (7%) Query: 69 IEQALADVDVPIV----GVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVN-RFA 123 + + L ++ V S L P + D A E+ + R + Sbjct: 214 LREVLDQLNPDAVHVLYDAKSSLLLFAYRPGLGSNIYDEAAACLKEVQRTLERVLRIRMS 273 Query: 124 FY---------GLPESSGKRWATEREYAFRQLVAEEKYRGVVYQ-GLETAPENWQHAQNR 173 F GL + A+ + + + + K G + Q L P+ + + Sbjct: 274 FLIGRGCADPEGLKAGLNELLASRHQRFYLEPLEISKLNGALEQKSLHGDPDLFVYYDRA 333 Query: 174 LADWLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALS 233 ++ ++L + G A D R I + PE + + + + L + L Sbjct: 334 SSELRESLLGKEGSGAARDTVDRWISWI--QGKRYAPESV------KDWVLKLLLDLKLR 385 Query: 234 SVAQGARQMGYQAAKLLHRLLDKEEMP-LQRILVPPVR-VIERRSTDYRSLTDPAVIQAM 291 + Y A L ++D + + L+ L + ++ + V +A Sbjct: 386 LHLLHSLSPAYTADALHKEIMDMDSLNELKSWLHDYLESTMQAMDRGFGGSRRSEVAEAC 445 Query: 292 HYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTL 351 Y+ + I +D V + ++ S + FK+E G T + K+E+A+ LL T Sbjct: 446 KYVSLRLDQRITLDDVAGCLHLNPSYFSRMFKKETGVTFIEYVTRMKMERAKELLRQTDR 505 Query: 352 SINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRD 385 ++ EI + Y ++ YF FK TP E+R+ Sbjct: 506 TVGEICESLAYDNVSYFSKTFKAYAGVTPVEFRN 539 >UniRef50_Q2BFH4 Putative uncharacterized protein n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2BFH4_9BACI Length = 515 Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats. Identities = 37/125 (29%), Positives = 65/125 (52%) Query: 264 ILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFK 323 +L R I + D + +A+ YIR + IK +V D V I+ + FK Sbjct: 390 LLQDIERAIHVFNLKAADNKDWLIERALEYIRTYYKSEIKAQEVADVVNITPNYFSSLFK 449 Query: 324 EEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEY 383 ++ G++ + ++ ++E+A++LL T INEI++ G+ +YF VF+K TP +Y Sbjct: 450 QKTGKSFNEYVNHMRVEEAKTLLEETPFKINEIAEQAGFHEYKYFVEVFRKFSGMTPTQY 509 Query: 384 RDVNS 388 R + S Sbjct: 510 RKLRS 514 >UniRef50_C0FZV1 Putative uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FZV1_9FIRM Length = 524 Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats. Identities = 42/159 (26%), Positives = 67/159 (42%), Gaps = 1/159 (0%) Query: 227 LSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPA 286 ++ L S QM + H LL + + L+ Y TD Sbjct: 365 IAHNVLVSHNMTTYQMLSRVRNQEHALLALKSVSCMEELIEEEVRKIWELVSYVEKTDTM 424 Query: 287 VIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLL 346 + YI H + ++ + +S + L K F++E G ++ I ++ +A+ LL Sbjct: 425 IADIRRYIDKHL-DSVTRSEISEEFYLSPNYLSKLFRKETGSSLSVYIQNVRMSRAKQLL 483 Query: 347 ISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRD 385 + T SI+EI+ GYPS +F FKK TP EYR Sbjct: 484 LETNYSISEIATETGYPSFAHFSKQFKKFVGKTPNEYRK 522 >UniRef50_A7GT81 Helix-turn-helix-domain containing protein AraC type n=32 Tax=Bacillus cereus group RepID=A7GT81_BACCN Length = 412 Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats. Identities = 39/147 (26%), Positives = 69/147 (46%), Gaps = 1/147 (0%) Query: 239 ARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHA 298 AR +G + + + D + + + + V +R A+ +YI + Sbjct: 262 ARTLGEMYIQNIEKSKDIKTID-KLLKVALCTFADRVKEHKAQHHSKAITTCQNYIFKNI 320 Query: 299 CKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQ 358 + I V Q+ V ++ + L FKEEVG +++ I E++E+A+ LL T S+++I Sbjct: 321 YQKISVKQLARMVNMNPNYLSILFKEEVGISLNEYIQRERVEEAKKLLTLTDYSLSDICA 380 Query: 359 MCGYPSLQYFYSVFKKAYDTTPKEYRD 385 + YF VFKK + TP +YR Sbjct: 381 WLNFSDQSYFTKVFKKFTNKTPGKYRK 407 >UniRef50_Q5WL10 AraC/XylS family transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WL10_BACSK Length = 298 Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats. Identities = 38/159 (23%), Positives = 73/159 (45%), Gaps = 2/159 (1%) Query: 232 LSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDP--AVIQ 289 L Q + + + ++ + +Q +L + I + + D V + Sbjct: 122 LLHDTDDTYQCLRRLILEVDKKSEQTDFMVQLLLSEYLIRIAELAEAKVAEPDQQAYVKR 181 Query: 290 AMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLIST 349 A+ YI + + + V + ++V + L++ FK G++IH + + ++ KA+++L T Sbjct: 182 ALAYIHQNYDREVSVADIANSVHLHPGYLQRVFKAFTGKSIHEFLISYRINKAKAMLKQT 241 Query: 350 TLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNS 388 +SI +I G S QYF + FKK TP EYR + Sbjct: 242 DISITDIPHYIGMNSQQYFSTTFKKHVKCTPSEYRKRHQ 280 >UniRef50_B0NGA4 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NGA4_EUBSP Length = 295 Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats. Identities = 41/184 (22%), Positives = 76/184 (41%), Gaps = 8/184 (4%) Query: 210 PEKLCVIGI--DNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVP 267 P + + +N + ++ + LL R+L + I + Sbjct: 105 PWSILWVHFKGENTAYFPIDEPHVVPMNSRHSDNRMMVLFNLLFRVLRRNYTLGNFIYIS 164 Query: 268 PV------RVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKR 321 V V R D S+ D V + ++ + + + ++++ + V +SRS L Sbjct: 165 QVLSLILSEVYYREKVDESSVQDRHVTMVIRFMYENLTRSLTLEEISEEVQLSRSYLNTI 224 Query: 322 FKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPK 381 FK + G + K+++A LL +T L I E+S GY YF +FKK +PK Sbjct: 225 FKNQTGRSPVEFFIHLKMQEACKLLKNTNLYIYEVSSRLGYEDQYYFSRIFKKVVGVSPK 284 Query: 382 EYRD 385 +Y++ Sbjct: 285 DYKN 288 >UniRef50_A8FI25 Response regulator n=2 Tax=Bacillus pumilus RepID=A8FI25_BACP2 Length = 472 Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats. Identities = 35/100 (35%), Positives = 53/100 (53%) Query: 287 VIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLL 346 + +A YI+ H C+ I ++Q V +S + KRFK+ G T + +L+K + LL Sbjct: 369 MERAKRYIKTHFCEQITLEQTAAYVDLSPTYFTKRFKDVTGLTFKEYVTNCRLDKIKKLL 428 Query: 347 ISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDV 386 ++LS+ EI+ GY Y VFKK +PKEYR Sbjct: 429 KDSSLSLKEITYQAGYTDPNYVSRVFKKMVGCSPKEYRKQ 468 >UniRef50_C4ZBG0 Transcriptional regulator, AraC family n=5 Tax=Clostridiales RepID=C4ZBG0_EUBR3 Length = 279 Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats. Identities = 38/190 (20%), Positives = 75/190 (39%), Gaps = 10/190 (5%) Query: 210 PEKLCVIGIDNEELTRYLSRVALSSVAQGARQM--GYQAAKLLHRLLDKEEMPLQRILVP 267 P + +G + L + + G + + L + D + L Sbjct: 87 PWEYTWVGFTGSDAATILRATDFTKAHPYIHSVSNGNEIKRQLMHIYDARGTEFENALEM 146 Query: 268 PVRVIER--------RSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLE 319 R+ S ++ + V + + YI + I V+ + +G+SRS+L Sbjct: 147 TGRLYTTLALFVSAATSKPPQNSANSYVQKGIEYISANYSYPITVEDIASYIGLSRSHLF 206 Query: 320 KRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTT 379 + F+ +G + + ++++A LL ++LSI I+ G+ + YF F K + Sbjct: 207 RSFQSILGVSPKEYLTDFRIKQACYLLKHSSLSITAIAGSIGFDNSLYFSKTFHKIKGLS 266 Query: 380 PKEYRDVNSE 389 PKEYR + Sbjct: 267 PKEYRSKYKK 276 >UniRef50_D1PRZ9 DNA-bindng response regulator, AraC family n=2 Tax=Ruminococcaceae RepID=D1PRZ9_9FIRM Length = 248 Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats. Identities = 32/116 (27%), Positives = 59/116 (50%) Query: 273 ERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHA 332 + R + + YI H + I ++ + D +G+S S L + FK+E G ++ A Sbjct: 127 KMRKNLRSDTNSKHINEGKDYIYAHIKERITIEDLADELGVSPSYLSRLFKKETGMSVSA 186 Query: 333 MIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNS 388 I +K+E A++LL + S+ +I+ + S +F F++ TPK+YRD + Sbjct: 187 YIRQQKIEIAKNLLRFSDSSLIDIANQLAFSSQSHFIQQFREVTGMTPKKYRDESR 242 >UniRef50_D2LZT6 Two component transcriptional regulator, AraC family n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LZT6_BACS4 Length = 512 Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats. Identities = 39/121 (32%), Positives = 59/121 (48%), Gaps = 2/121 (1%) Query: 265 LVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKE 324 L+ +R + + D L + YI H+ + I +D++ VG+S + K FKE Sbjct: 388 LLQQMRQLYTKHYDQLELDS--IFLMKRYILEHSHEDISLDKLAKKVGLSPIYMSKLFKE 445 Query: 325 EVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 ++G + ++EKA+ LL SI EI+ GY YF VFKK +PKEYR Sbjct: 446 KLGVNYIDFLTECRIEKAKQLLKRPDKSIKEITFDVGYHEPNYFSKVFKKMCGVSPKEYR 505 Query: 385 D 385 Sbjct: 506 K 506 >UniRef50_A6M1S5 Transcriptional regulator, AraC family n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6M1S5_CLOB8 Length = 286 Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats. Identities = 48/192 (25%), Positives = 82/192 (42%), Gaps = 13/192 (6%) Query: 210 PEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQ-----AAKLLHRLLDKEEMPLQRI 264 P + + + RYL + LSS Y L LL+ P I Sbjct: 92 PWNYVWVEFEGLKAQRYLEEIGLSSKNLIFTPKEYNNDDNSIKDNLMFLLNNPSAPDSAI 151 Query: 265 L----VPPVRVIERRSTDYR----SLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRS 316 L + ++E S + +L + V +A++YI + I V+ + + RS Sbjct: 152 LGHLYLFFYALLENSSFNNTKSASNLQEFYVREAINYIEKNYNNNISVENIAKWCNLDRS 211 Query: 317 NLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAY 376 K FK + T + +L KA +L +SI EIS++ GYP+ +F FK+ Y Sbjct: 212 YFGKIFKNSMKTTPQEFLIKYRLSKACEMLKDNNISIREISELTGYPNQFHFSRSFKEVY 271 Query: 377 DTTPKEYRDVNS 388 + +P+++R+ N Sbjct: 272 NMSPRQWRNQNK 283 >UniRef50_A8SRM1 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SRM1_9FIRM Length = 296 Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats. Identities = 45/184 (24%), Positives = 79/184 (42%), Gaps = 9/184 (4%) Query: 210 PEKLCVIGIDNEELTRYLSRVALSSVAQGAR-QMGYQAAKLLHRLLDKEEMP------LQ 262 P + G LS + L+ + G + K + +L L Sbjct: 85 PWRYVWFGFSGRCAHDTLSSIGLTQNQPIFTCEDGDKLKKYVFDMLAHNTSGHADHYRLM 144 Query: 263 RILVPPVRVIE--RRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEK 320 +L + VI ++ + V A+ YI+NH +KV+++ D VGI+RS Sbjct: 145 GMLYLALSVIANAQKDKLEAPSGNAYVNHAISYIQNHYSMPMKVEELSDYVGINRSYFSD 204 Query: 321 RFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTP 380 FK+ G + + ++ KA+ +L + LS+ I+ CGY S + F+ +F+K +P Sbjct: 205 LFKQYTGMSPVKYLQNFRITKAQHMLTISELSVESIAFSCGYQSAEAFHKIFRKTTGLSP 264 Query: 381 KEYR 384 YR Sbjct: 265 NAYR 268 >UniRef50_C1I6U7 Helix-turn-helix domain-containing protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I6U7_9CLOT Length = 419 Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats. Identities = 41/154 (26%), Positives = 75/154 (48%), Gaps = 4/154 (2%) Query: 234 SVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHY 293 V+ ++A + L+ + D E+ L+ IL V + + +Y S A+++ Y Sbjct: 266 EVSLTLTDFYFEAVEELNTIKDINELFLKMILDYTEHVNKVKMYNYSS----AILKCQKY 321 Query: 294 IRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSI 353 I H + I + + D ++ L FK+EVG +I I E++E+++ L++S S+ Sbjct: 322 IFEHLYEKISLSILADYSSMNPCYLSHLFKKEVGVSISDYIQKERIEESKKLILSGKKSL 381 Query: 354 NEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVN 387 +I G+ +F FKK TPKEY+ + Sbjct: 382 VDIYVPLGFIDQSHFSKTFKKFVGITPKEYKTLY 415 >UniRef50_Q9K9C1 Two-component response regulator n=1 Tax=Bacillus halodurans RepID=Q9K9C1_BACHD Length = 510 Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats. Identities = 31/125 (24%), Positives = 58/125 (46%) Query: 265 LVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKE 324 + V ++ + Y + ++ + + YI H + + + Q+ + + S L F++ Sbjct: 380 FYQFLEVTKQIISVYSNEGSSSIQKMLAYIEEHHSEPLSLSQLANYFHFNPSYLSAYFRQ 439 Query: 325 EVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 E ++ ++ KA+ L S+T+ I+EI + GY YF VFKK P YR Sbjct: 440 HHDEGFSEYLNKVRIRKAKEWLKSSTIPISEIYALVGYSDHSYFCKVFKKRTGMPPSRYR 499 Query: 385 DVNSE 389 N+E Sbjct: 500 RENAE 504 >UniRef50_C6D6F5 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D6F5_PAESJ Length = 778 Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats. Identities = 45/221 (20%), Positives = 90/221 (40%), Gaps = 23/221 (10%) Query: 171 QNRLADWLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRV 230 + ++ L G ++ A+ + Q HL + + V G++ L + ++ Sbjct: 580 EEEASELLSAF---VGALSCAGAKEIEVQQGMLHLLGNIQHVIMVSGVNPNRLFKGVNLY 636 Query: 231 -ALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQ 289 LS + + R + + ++L P + S S + Sbjct: 637 EQLSQIREPKRMLCW---------------FRDKVLAPYQ---KELSCRAGSEVKRLIEA 678 Query: 290 AMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLIST 349 AM Y++ + + I +D + +G + L K FK G+ + ++E+A+ LL + Sbjct: 679 AMIYMQQYYRQDISLDNCAEHIGTNPFYLSKSFKVVTGKNFIDYLTELRIERAKELLRES 738 Query: 350 TLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSEV 390 L IN++++ GY YF +FKK TP YR+ + + Sbjct: 739 ELKINDVAEQVGYQH-SYFNRIFKKLEGMTPTSYREQSQHL 778 >UniRef50_B7GJK9 DNA-binding response regulator (Contains REC and AraC-type DNA-binding domain) n=1 Tax=Anoxybacillus flavithermus WK1 RepID=B7GJK9_ANOFW Length = 428 Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats. Identities = 29/100 (29%), Positives = 50/100 (50%) Query: 286 AVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSL 345 + Q +++ + C + +++V V ++ K FK+E G+T + ++EKA+ L Sbjct: 323 VIEQVEMFLQENYCYDVTLEEVAKYVHLTPYYFSKLFKKETGQTFIDYVTHLRIEKAKQL 382 Query: 346 LISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRD 385 + L++ E GY YF VFKK + TP EYR Sbjct: 383 MRDEGLTVKEACYRVGYKDPNYFSRVFKKVTNMTPTEYRQ 422 Score = 51.9 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 23/133 (17%), Positives = 47/133 (35%), Gaps = 9/133 (6%) Query: 215 VIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPP----VR 270 V+ +D+ LT + + + + Q+ + + EE+ L P + Sbjct: 300 VMHVDDVPLTDEVEQTTIKTGGSVIEQVEMFLQENYCYDVTLEEVAKYVHLTPYYFSKLF 359 Query: 271 VIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGI-SRSNLEKRFKEEVGET 329 E T +T + +A +R+ +G+ V + VG + + FK+ T Sbjct: 360 KKETGQTFIDYVTHLRIEKAKQLMRD---EGLTVKEACYRVGYKDPNYFSRVFKKVTNMT 416 Query: 330 IHAMIHAEKLEKA 342 E+A Sbjct: 417 PTEYRQDV-CERA 428 >UniRef50_UPI0001C359BB two component transcriptional regulator, AraC family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C359BB Length = 108 Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats. Identities = 34/106 (32%), Positives = 59/106 (55%) Query: 284 DPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKAR 343 +V + M Y+ + + +D++ + V ++RS + FK+E G I+A + ++EKA+ Sbjct: 2 SDSVFKIMQYMEARYAEPVTLDELANHVHMNRSYISHLFKKETGRNINAYLLEFRMEKAK 61 Query: 344 SLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSE 389 LL S+ +I +I G P YF VFKK TP E+R +++E Sbjct: 62 ILLESSNHNIQDICCQIGIPDSAYFSKVFKKYTGFTPIEFRRISNE 107 >UniRef50_C6JCU5 Two component transcriptional regulator n=2 Tax=Ruminococcus RepID=C6JCU5_9FIRM Length = 539 Score = 145 bits (365), Expect = 3e-33, Method: Composition-based stats. Identities = 45/160 (28%), Positives = 67/160 (41%), Gaps = 4/160 (2%) Query: 233 SSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILV--PPVRVIERRSTDYRSLTDPAVIQA 290 S++ ++ Q KLL + + LV V E S + A Sbjct: 380 QSLSDDPEKIIAQREKLLKEVSQAKTFDKAVTLVKEYAEGVFESLQDLNSSSGQRQGMMA 439 Query: 291 MHYIRNHACK-GIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLIST 349 M YIR + + ++ + + IS S FKE GET + ++EKA+ LL +T Sbjct: 440 MDYIRKNYMDPDLSLNSICSYLNISTSYFSTIFKEMTGETFVESLTRIRMEKAKELLENT 499 Query: 350 TLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEY-RDVNS 388 TL EI++ G+ YF FKK TP EY R+ Sbjct: 500 TLKNYEIAEKVGFSDPHYFGISFKKMTGKTPTEYAREKRR 539 >UniRef50_C2Z9K1 Transcriptional regulator, AraC n=2 Tax=Bacillus cereus RepID=C2Z9K1_BACCE Length = 416 Score = 145 bits (365), Expect = 3e-33, Method: Composition-based stats. Identities = 44/205 (21%), Positives = 83/205 (40%), Gaps = 13/205 (6%) Query: 187 IIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQA 246 I + + + + + + L + GI + R A+ + + Sbjct: 214 IFDYSIVGEAELGLLSKRNRLRSEKNLMITGI------ALVCRAAIEGGLNN--ETAFTL 265 Query: 247 AKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLT----DPAVIQAMHYIRNHACKGI 302 + + L+ E L+ IL I + L + HYI +H I Sbjct: 266 SDFYIQQLE-ELRSLKGILKLMEEAIMDFTNRVHQLNIEKYSATITACQHYIYDHLYDDI 324 Query: 303 KVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGY 362 K+D + +S + L FK+EVG + I +++++A+ LL+ T SI +IS + Sbjct: 325 KLDHLAQLCHLSPNYLSSLFKKEVGTPLSEYIQRQRVDEAKKLLLLTNYSILDISMWLNF 384 Query: 363 PSLQYFYSVFKKAYDTTPKEYRDVN 387 YF +FKK TP+++R+ + Sbjct: 385 NDQSYFIKIFKKYTGLTPRQFRNDH 409 >UniRef50_UPI0001851370 two component AraC family transcriptional regulator n=1 Tax=Bacillus coahuilensis m4-4 RepID=UPI0001851370 Length = 253 Score = 145 bits (365), Expect = 3e-33, Method: Composition-based stats. Identities = 48/216 (22%), Positives = 84/216 (38%), Gaps = 14/216 (6%) Query: 187 IIAVTDARARHILQVCEHLHIPVPEKLCVIGIDN-----EELTRYLSRVALSSVAQGARQ 241 + A +A I++ I K+ V+G E R+ L+ Q Sbjct: 31 VEAENGQQAVQIIETSSPEIIITDMKMPVMGGGKLLEWLNETECPSIRIVLTGFDQYEYM 90 Query: 242 MGYQAAKLLHRLLD-KEEMPLQRILVPPVRVIERRSTDYRSLTDPA--------VIQAMH 292 LL + L +L V ++ + + + + + Sbjct: 91 RKAVQHGSFDYLLKPIDPDLLHEVLTKAVSAVQLQQPKGEVVAEDYKDQTITITMRKVEE 150 Query: 293 YIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLS 352 Y++ + + IK+ + D ISR + ++FKE TI + +++KA LL T L Sbjct: 151 YLKEYYHEDIKLQDIADTFYISREYISRKFKEHFHLTITDYLVDLRMKKAMELLDRTNLK 210 Query: 353 INEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNS 388 + EI++ GY +YF VFKK TP +YR + Sbjct: 211 VYEIAEKVGYVDDKYFRKVFKKFAGVTPNDYRQKDK 246 >UniRef50_A3DHI5 Transcriptional regulator, AraC family n=5 Tax=Clostridium RepID=A3DHI5_CLOTH Length = 302 Score = 145 bits (365), Expect = 3e-33, Method: Composition-based stats. Identities = 32/127 (25%), Positives = 59/127 (46%), Gaps = 4/127 (3%) Query: 263 RILVPPVRVIERRSTDYRSLTDPAVIQAMH----YIRNHACKGIKVDQVLDAVGISRSNL 318 + V R ++ + P + + + YI N+ + I + + V +S S Sbjct: 169 ELFVLISRALKMEWENSIKNKSPKIKELIQASVNYINNNYERDISLKDIARYVFLSTSYF 228 Query: 319 EKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDT 378 + FKEE+G + + ++E+A+ LL T I++I+ G+ + Q F +FKK Sbjct: 229 TRAFKEEMGISPINYLLKIRVERAKELLKDTDNRISDIALSVGFSNQQRFNDIFKKYVKL 288 Query: 379 TPKEYRD 385 TP +YR Sbjct: 289 TPLQYRK 295 >UniRef50_Q9K690 Two-component response regulator n=1 Tax=Bacillus halodurans RepID=Q9K690_BACHD Length = 530 Score = 145 bits (365), Expect = 3e-33, Method: Composition-based stats. Identities = 30/119 (25%), Positives = 53/119 (44%) Query: 267 PPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEV 326 + ++ + ++ A Y+ +H + + +D + +G+S + K FKE Sbjct: 397 EILHIVRTLQEWRTTDEQSLMLLARDYVHDHFREPLTLDDLAKHIGLSPYYVSKLFKERF 456 Query: 327 GETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRD 385 T + ++E A+ LL T S+ EI+ GY YF VFKK +P +YR Sbjct: 457 DLTFSEYVTQLRVEHAKQLLSLTQKSLKEITYEIGYKDPNYFSRVFKKLTGKSPSDYRK 515 >UniRef50_Q1VVA7 AraC-type DNA-binding domain-containing protein n=2 Tax=Flavobacteriaceae RepID=Q1VVA7_9FLAO Length = 306 Score = 145 bits (365), Expect = 4e-33, Method: Composition-based stats. Identities = 37/170 (21%), Positives = 84/170 (49%), Gaps = 15/170 (8%) Query: 219 DNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTD 278 +N ++ L R+ + + G+++ L ++ ++ +++ ++ R + Sbjct: 145 NNTQVQHLLERLLQTFSS------GHKSKDALLDVM------IKELILRLLQTNARGALL 192 Query: 279 YRS---LTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIH 335 + + + + YIR + I V+ + D +S+S+ K FK +GET ++ Sbjct: 193 DENSYLFDNHRMAFVLKYIREYYKDDITVEDLADKACMSKSHFYKSFKNTLGETPMEYLN 252 Query: 336 AEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRD 385 +E+L++A+ L+ +T+ ++EI+ G+ S YF + FKK TP ++R Sbjct: 253 SERLKQAKKLIRTTSSKLSEIAFSTGFNSSSYFVTQFKKQEGMTPSQFRK 302 >UniRef50_A8RKC7 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RKC7_9CLOT Length = 545 Score = 145 bits (365), Expect = 4e-33, Method: Composition-based stats. Identities = 36/157 (22%), Positives = 73/157 (46%), Gaps = 3/157 (1%) Query: 229 RVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVI 288 + L +A+ + G A ++ R++ KE+ +L +R+ + + + + + Sbjct: 388 DLDLEQLAEEGEEQGDTFA-VIPRMMKKEDFAHW-LLSAALRMNQAMNRERDNTMKQVIQ 445 Query: 289 QAMHYIRNHACK-GIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLI 347 +A YI ++ + V+++ + +S + FK+E G+ A + +L+KA LL Sbjct: 446 KAKEYIMDNYQDPDLSVEKICRQLHMSPAYFSTMFKKETGQAYTAYLTQVRLDKAVELLN 505 Query: 348 STTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 T I+ GY YF VFKK + +P ++R Sbjct: 506 KTDDKTYVIAAKVGYQEQNYFSYVFKKRFGVSPTKFR 542 >UniRef50_A9U7M3 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U7M3_PHYPA Length = 385 Score = 145 bits (365), Expect = 4e-33, Method: Composition-based stats. Identities = 37/133 (27%), Positives = 73/133 (54%), Gaps = 3/133 (2%) Query: 254 LDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGI 313 + + ++L + + S Y S P + A+ YIR H + ++++ + AV + Sbjct: 245 IQQLSNLHDKMLYEYCETVRKLSLKYYS---PVIRTAIEYIRLHLAEPLRLEAIATAVHV 301 Query: 314 SRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFK 373 S S+L ++FK+E G+ + + I++ ++ +A ++ S +SI +I+QM G+ + YF VFK Sbjct: 302 SPSDLSRQFKKETGQPLTSYINSLRIREALQIIRSEPISITDIAQMVGFSDVNYFTKVFK 361 Query: 374 KAYDTTPKEYRDV 386 + TP +YR Sbjct: 362 QLQGVTPSDYRKT 374 >UniRef50_B0NHY9 Putative uncharacterized protein n=2 Tax=Clostridium RepID=B0NHY9_EUBSP Length = 507 Score = 145 bits (365), Expect = 4e-33, Method: Composition-based stats. Identities = 33/103 (32%), Positives = 56/103 (54%) Query: 286 AVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSL 345 V +A+ +I+ + +GI +++V + +S L +FK++ G T I ++E + L Sbjct: 405 LVQKAIQHIQEYYNQGITLEEVAAKLHVSEEYLSTQFKKQTGRTFTETIRKYRIENVKEL 464 Query: 346 LISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNS 388 L+ +TL +N+I+ M GY +Y VFK P EYR NS Sbjct: 465 LLKSTLKLNQIADMVGYSDPKYMSKVFKDEVGMLPAEYRKKNS 507 >UniRef50_UPI0001C3678C two component transcriptional regulator, AraC family protein n=2 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C3678C Length = 539 Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats. Identities = 46/174 (26%), Positives = 76/174 (43%), Gaps = 25/174 (14%) Query: 213 LCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVI 272 + DNEE + RVALSS H +L E L + + V+ Sbjct: 381 YAHMLFDNEENNKIYGRVALSS----------------HNMLQYLEYLLSKAM-EYKDVV 423 Query: 273 ERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHA 332 ER T V Y+ +H + + D + V ++ L + FK+E+G +I + Sbjct: 424 ERPHT--------IVDTIRDYMDHHFQENLSRDDLSRLVFLNPDYLSRLFKKEMGLSISS 475 Query: 333 MIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDV 386 + ++++ A+ LL +T ++ IS GY + YF VFK+ +P EYR Sbjct: 476 YLIQKRIDLAKELLSTTRTPVSVISSQAGYDNFAYFTKVFKEKTGMSPNEYRKK 529 >UniRef50_C6IY53 Two component transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IY53_9BACL Length = 545 Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats. Identities = 34/117 (29%), Positives = 55/117 (47%) Query: 273 ERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHA 332 E + + + + + Y+ H + I + V + S L K FK E Sbjct: 421 EYGADRRETDSSQLIWHIVDYLDAHYFEDISLIDVATRFHLDPSYLSKLFKSVTSENFIE 480 Query: 333 MIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSE 389 + +++EKA LL S+ I+EIS++ GY + +YF VFKK+ TP EYR+ Sbjct: 481 YVTRKRIEKACELLRSSERKISEISELIGYENQRYFSQVFKKSTGQTPSEYREAQQS 537 >UniRef50_A5ZM23 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZM23_9FIRM Length = 518 Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats. Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 1/111 (0%) Query: 278 DYRSLTDPAVIQAMHYIRNHA-CKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHA 336 + S +P + YI + + + V + V +S S + FK E G+T++ I Sbjct: 406 ETTSQENPTIFLIKDYISKNYMNETLSVKDISSHVFLSTSYVCTFFKSETGQTLNQYITE 465 Query: 337 EKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVN 387 ++EKA+ LL I +IS GY YF FKK +P EYR+ N Sbjct: 466 YRMEKAKQLLKDARFKITDISSRVGYSDGNYFGKSFKKYSGLSPSEYREQN 516 >UniRef50_C4FUL3 Putative uncharacterized protein n=2 Tax=Catonella morbi ATCC 51271 RepID=C4FUL3_9FIRM Length = 277 Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats. Identities = 39/191 (20%), Positives = 77/191 (40%), Gaps = 12/191 (6%) Query: 210 PEKLCVIGIDNEELTRYLSRVALSSVAQGAR----QMGYQAAKLLHRLL----DKEEMPL 261 P C I + + ++ + L++ + L ++ E + Sbjct: 87 PWTYCWIEFNGLKAANFMRQAGLNANNLIFTPHKPMIISSIKDTLETIIRNHSQHESFLI 146 Query: 262 QRILVPPVRVIERRSTDYRSLTDP----AVIQAMHYIRNHACKGIKVDQVLDAVGISRSN 317 ++ + +I + + + +A+HYI++H VDQ+ D ++R+ Sbjct: 147 AQLYLLVDHLIRFSKHSPQQRPNEIHSFYIREAIHYIQDHYMDNPSVDQLADICHLNRNY 206 Query: 318 LEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYD 377 + FK+E+ T I ++ ++ LL ST SI +I+ GY + F S FK+ Sbjct: 207 FTRLFKQELHMTPSQFILTYRINQSCELLASTNRSIRDIADQIGYSNQFNFSSAFKRVKG 266 Query: 378 TTPKEYRDVNS 388 TP E+R Sbjct: 267 MTPMEWRRRYR 277 >UniRef50_C5EPF6 Two component transcriptional regulator n=4 Tax=Clostridiales RepID=C5EPF6_9FIRM Length = 550 Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats. Identities = 35/131 (26%), Positives = 60/131 (45%), Gaps = 1/131 (0%) Query: 262 QRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHAC-KGIKVDQVLDAVGISRSNLEK 320 + ++ + R + S + +A +IR + + I ++ V V IS S Sbjct: 420 ESLIRLFEGTMLLRDSQTASKYSQVLEEARAFIRENYAKEEISLNTVAARVNISPSYFSS 479 Query: 321 RFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTP 380 F +E+G T + ++E+A+ LL+ + + EI GY YF +FKK TP Sbjct: 480 IFSQEMGVTFVEYLTGVRMERAKELLMCSNMKTTEIGYEVGYKDSHYFGYLFKKTVGCTP 539 Query: 381 KEYRDVNSEVM 391 KEYR + E + Sbjct: 540 KEYRAGSRERL 550 >UniRef50_C0ERJ9 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ERJ9_9FIRM Length = 294 Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats. Identities = 34/120 (28%), Positives = 62/120 (51%), Gaps = 2/120 (1%) Query: 265 LVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKE 324 LV + + + +SL + + YI N+ + I ++ + + S+S K FKE Sbjct: 176 LVSNCGQNKIKPINQKSL--KKIKTILSYIANNFQENIAIEDIANYCFYSKSYFMKFFKE 233 Query: 325 EVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 +G + ++ +LE A LL +TT +I +I+ G+ ++ YF FKK Y +P++YR Sbjct: 234 TMGVSFIQYLNDYRLEIAAELLTTTTDNILDIAFATGFNNISYFNRCFKKKYGVSPRKYR 293 >UniRef50_UPI000178A7F3 two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178A7F3 Length = 349 Score = 144 bits (364), Expect = 5e-33, Method: Composition-based stats. Identities = 46/225 (20%), Positives = 88/225 (39%), Gaps = 10/225 (4%) Query: 164 PENWQHAQNRLADWLQTLPPQTGIIAVTDARA--RHILQVCEHLHIPVPEKLCVIGIDNE 221 + + ++L DWL+ L + + D + + I C E + + + +E Sbjct: 129 KQRFYFPLSKLEDWLEQLELAVWHLQMNDIQMKLQEIEDYCNERRF---ESIQLQELLDE 185 Query: 222 ELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRS 281 + + ++ V R G +R + + ++ + Sbjct: 186 LYAKLIKQLNGRDVYSFERMTGISGPA-----PGGNHHYFERFRLAVNQTVKLIREKRKG 240 Query: 282 LTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEK 341 V +A YI + + + +D+V D +G++ S + FK+ ET +++EK Sbjct: 241 NAKEPVEEAKAYIERNLSRDLSLDEVADMLGLNPSYFSQLFKQMTDETFVHYRIKKRMEK 300 Query: 342 ARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDV 386 A+ LL I +IS GY +F FKK TP EYR++ Sbjct: 301 AKKLLAIPHYKITDISFEVGYADHPHFTKTFKKVTGYTPSEYREM 345 >UniRef50_B7DU32 Transcriptional regulator, AraC family n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DU32_9BACL Length = 334 Score = 144 bits (364), Expect = 5e-33, Method: Composition-based stats. Identities = 44/221 (19%), Positives = 86/221 (38%), Gaps = 27/221 (12%) Query: 187 IIAVTDARA---RHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMG 243 +I A +++ + + + +G+ L+ Q AR+ Sbjct: 111 LILCDSEFADADIEVMRTRASSGLTIGARFA-LGL----TRCSDGVAGLTHSIQVAREAA 165 Query: 244 YQAAKLLHRLLDKEEMPLQRILV-------------------PPVRVIERRSTDYRSLTD 284 QA L E+M + + R +S Sbjct: 166 RQAVLFGQSFLCAEDMDSEIHTMADESGNVIHIDQNGDSTEAESCETETPRLEPSKSPRS 225 Query: 285 PAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARS 344 + A+ YI++H + + ++ +S +L F++E+G T+ A I + +L+KAR Sbjct: 226 RIIQAAVDYIQSHLADELSLTRIAVYCSVSTYHLSHLFRKEMGMTLTAFIKSLRLKKARE 285 Query: 345 LLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRD 385 LL++++L+++EI+ G+ YF F+ Y P EYR Sbjct: 286 LLLNSSLTVSEIAYQVGFSDPNYFSKTFRVTYGLPPSEYRS 326 >UniRef50_UPI0001789C33 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789C33 Length = 293 Score = 144 bits (364), Expect = 5e-33, Method: Composition-based stats. Identities = 36/130 (27%), Positives = 68/130 (52%), Gaps = 2/130 (1%) Query: 258 EMPLQRILVPPVRVIERRSTDYRSLTDPA--VIQAMHYIRNHACKGIKVDQVLDAVGISR 315 E + L+ + +++R D ++ P + A+ YI +H + V QV + +S Sbjct: 152 EFLMMGQLIQVLAMLQRYECDGSMVSTPTNNMDDAIQYINDHFATNLTVQQVAERSFMSP 211 Query: 316 SNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKA 375 S+ ++ FK+ G T + ++++ LL ST +SI E + GY +++F+S+F+K Sbjct: 212 SHFQRLFKKTTGVTFMQFLQNIRVQRCCELLKSTEISIQEAANQVGYQDMKFFHSLFRKK 271 Query: 376 YDTTPKEYRD 385 TP+EYR Sbjct: 272 TGVTPREYRR 281 >UniRef50_B1ZXD9 Transcriptional regulator, AraC family n=2 Tax=Opitutaceae RepID=B1ZXD9_OPITP Length = 430 Score = 144 bits (364), Expect = 5e-33, Method: Composition-based stats. Identities = 39/174 (22%), Positives = 82/174 (47%), Gaps = 13/174 (7%) Query: 222 ELTRYLSRVALSSVAQGARQMG--YQAAKLLHRLLDKEEMPLQ-----RILVPPVRVIER 274 EL ++R A+ + ++ +G YQ+ L R+ +EE+ +L+ ++ R Sbjct: 257 ELVVTMTRTAVQAGGDPSQILGLNYQSITTLARIASQEELATWLCEMLELLIDAIQANRR 316 Query: 275 RSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMI 334 + + +A+ Y+ H + ++V A G+S S+ +++ G + ++ Sbjct: 317 HPNSVQ------LARAIEYMEEHLAGELTREEVARAAGLSPSHFSHLMRDKTGRSFTELL 370 Query: 335 HAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNS 388 ++++A LL T + +I+Q CG+ YF VF++A TP E+R + Sbjct: 371 TRLRVDRACHLLARTETELAQIAQSCGFGDQSYFTRVFRRATQQTPGEFRRAQT 424 >UniRef50_C6CTP9 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CTP9_PAESJ Length = 537 Score = 144 bits (364), Expect = 5e-33, Method: Composition-based stats. Identities = 41/171 (23%), Positives = 78/171 (45%), Gaps = 6/171 (3%) Query: 222 ELTRYLSRVALSSVAQGARQMGYQAAKLL---HRLLDKEEMPLQ---RILVPPVRVIERR 275 E LSR A+ Q G + + L L ++ + L+ R L+ + Sbjct: 367 EYESMLSRWRQELAAKQGIQAGAEPSSGLPLYVLLDEQGRLSLELCRRELLNGLTAFAAL 426 Query: 276 STDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIH 335 + + + Y+ + + + + + + +SR + +RFK+E+GE + + Sbjct: 427 TGAGGNKEHSIMRDIARYMEQNYNREVTLQDISERFYLSREYISRRFKQEMGENVFDYLG 486 Query: 336 AEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDV 386 ++EKA+ LL + L I +I++M GY +YF VFKK +P +YR + Sbjct: 487 RIRVEKAKLLLQNPNLKIAQIAEMVGYDDDKYFSKVFKKFEGQSPNQYRKL 537 >UniRef50_B8CYB7 Helix-turn-helix-domain containing protein AraC type n=1 Tax=Halothermothrix orenii H 168 RepID=B8CYB7_HALOH Length = 415 Score = 144 bits (364), Expect = 5e-33, Method: Composition-based stats. Identities = 48/165 (29%), Positives = 78/165 (47%), Gaps = 3/165 (1%) Query: 222 ELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPV-RVIERRSTDYR 280 EL L+R A+ A G + ++ L ILV + R IE + Sbjct: 251 ELMVVLARAAIEVGADLEVIFGLENTYFNKIDNIEDVNRLSEILVRVLDRFIECIFSIKN 310 Query: 281 SLTDPAVIQAMHYIRNHA-CKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKL 339 + +AM+YIR++ K I +++V D VG+S + K FKEE+G T ++ ++ Sbjct: 311 VRKKDLMYKAMNYIRDNYAHKSISLNEVADEVGLSAAYFSKLFKEELGLTYTEYLNKVRI 370 Query: 340 EKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 E ++ LL S+ I+Q G+ YF VFKK +P ++R Sbjct: 371 EASKELLKQ-GCSLASIAQTVGFNDQSYFSKVFKKMEGLSPGKWR 414 >UniRef50_Q8YSB8 Transcriptional regulator n=2 Tax=Nostocaceae RepID=Q8YSB8_ANASP Length = 306 Score = 144 bits (364), Expect = 5e-33, Method: Composition-based stats. Identities = 31/111 (27%), Positives = 58/111 (52%) Query: 276 STDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIH 335 ++ L+ + QA+ YI + + + + + AVG+S ++FK+ G H + Sbjct: 193 DHHHKGLSHWKLRQAISYIHENLDQDLTLVDISTAVGMSMYYFSRQFKQSTGFAPHQYVM 252 Query: 336 AEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDV 386 ++E+A+ LL ST +I +I G+ S +F +VF+K TP+ YR+ Sbjct: 253 NCRIERAKKLLGSTNKTIEQICTQVGFQSQSHFTNVFRKLMGITPRVYREQ 303 >UniRef50_C6J0N4 Response regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J0N4_9BACL Length = 533 Score = 144 bits (364), Expect = 5e-33, Method: Composition-based stats. Identities = 45/166 (27%), Positives = 77/166 (46%), Gaps = 5/166 (3%) Query: 221 EELTRYLSRVALSSVAQGARQMG-YQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDY 279 + L + +L+ A+ ++ YQ+ L + E + R + ++ R+TD Sbjct: 370 DRLEEQIHSPSLNGQAEPVKRAALYQSVYDCQTLQEI-EAAIWRAAAHYLELLMERATDK 428 Query: 280 RSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKL 339 + V Q I N + I + + V +S + L F+++ G TIH + +L Sbjct: 429 NA---KLVHQVCQIIDNTYHEPITIQSLSSQVYLSPNYLRSIFRDKTGMTIHDYLTRIRL 485 Query: 340 EKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRD 385 EKA+ +L +L + +I+Q GY S YF S+F K TP EYR Sbjct: 486 EKAKEMLADPSLKVQDIAQKIGYESTSYFISLFVKNQGVTPNEYRK 531 >UniRef50_C6CSY2 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CSY2_PAESJ Length = 533 Score = 144 bits (364), Expect = 5e-33, Method: Composition-based stats. Identities = 29/117 (24%), Positives = 58/117 (49%), Gaps = 2/117 (1%) Query: 272 IERRSTDYRSLTDPA--VIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGET 329 IE S +D + + + + Y+ H + + + + + S L ++FK G Sbjct: 407 IEAHIRARASSSDASNPMSEIVAYLDGHYFEDVGLIDMATRYHMDPSYLSRQFKAATGVN 466 Query: 330 IHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDV 386 + +++EKA LL + +++I+++ GY + +YF VFKK TP E+R++ Sbjct: 467 FIEYVTRKRMEKACELLRESDRKVSDIAELVGYENQRYFSQVFKKFTGQTPSEFREL 523 >UniRef50_C5RL17 Transcriptional regulator, AraC family n=2 Tax=Clostridium cellulovorans 743B RepID=C5RL17_CLOCL Length = 282 Score = 144 bits (364), Expect = 5e-33, Method: Composition-based stats. Identities = 41/189 (21%), Positives = 83/189 (43%), Gaps = 13/189 (6%) Query: 210 PEKLCVIGIDNEELTRYLSRVALSSVA-------QGARQMGYQ------AAKLLHRLLDK 256 P + + ++L ++ LSS + + +Q + LL Sbjct: 87 PWTYAWVEFNGRLSEKFLHQIGLSSKTPVFSCKKKDLLEASFQYIFDACKKSRNNNLLIL 146 Query: 257 EEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRS 316 + ++ E+ + L D + QAM +I + + + + ++ + ++R+ Sbjct: 147 SSLYHFLAMIHEASAPEQTEKNTEKLKDYYIHQAMIFIEKNYYRNLCISEMAKYLSLNRN 206 Query: 317 NLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAY 376 + FKE VG T A + +++KA+ L+ +++L+I EIS + GY F +FKK + Sbjct: 207 YMSTLFKESVGITPQAYLINYRMDKAKELMKNSSLTIGEISSLVGYNDPLMFSRMFKKLF 266 Query: 377 DTTPKEYRD 385 PK YR+ Sbjct: 267 GIPPKNYRN 275 >UniRef50_UPI000178AA55 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178AA55 Length = 275 Score = 144 bits (363), Expect = 5e-33, Method: Composition-based stats. Identities = 34/125 (27%), Positives = 61/125 (48%), Gaps = 3/125 (2%) Query: 264 ILVPPVRVIERRSTDYRSLTDP---AVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEK 320 +L RV E + + + + YI+NH + I ++Q+ + + + K Sbjct: 149 MLDILSRVFEHQQPQIHADKMEDMGRLHKVQQYIKNHLHEEITLEQMAGTLHLHPNYFIK 208 Query: 321 RFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTP 380 FK G T + +++E+A+ +L +T+LSI EI+ G+ S YF F+K +P Sbjct: 209 YFKRHFGITPQKYLSLKRMEQAKLMLRTTSLSIKEIADATGFESANYFSKTFRKEVGYSP 268 Query: 381 KEYRD 385 EYR+ Sbjct: 269 SEYRN 273 >UniRef50_C6CVD2 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CVD2_PAESJ Length = 536 Score = 144 bits (363), Expect = 6e-33, Method: Composition-based stats. Identities = 32/107 (29%), Positives = 56/107 (52%) Query: 284 DPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKAR 343 P V + YI H + + +Q+ ++ + L + F++E G + I E++E+A Sbjct: 429 SPIVQKVKAYIAEHLNEELSREQLASIAFVNPAYLSRLFRKETGMVLTDYILKERMERAA 488 Query: 344 SLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSEV 390 LL +T SI+EI+ Y + YF +F+K + TP+EYR +V Sbjct: 489 ELLATTDRSISEIADGLSYGNFSYFARLFRKVHGVTPQEYRKPYRKV 535 >UniRef50_A8SS64 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SS64_9FIRM Length = 328 Score = 144 bits (363), Expect = 6e-33, Method: Composition-based stats. Identities = 48/195 (24%), Positives = 82/195 (42%), Gaps = 14/195 (7%) Query: 210 PEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGY-QAAKLLHRLLDK------EEMPLQ 262 P +G ++ + + + A ++ +L+ E+ Q Sbjct: 120 PWSYMWVGFHGYRAEDFIESMGYKKDSPIIKIEQMDTCATCINNMLEYSQITRINEVKRQ 179 Query: 263 RILVPPVRVIERRSTDYRSLTDP-------AVIQAMHYIRNHACKGIKVDQVLDAVGISR 315 L+ I +T + D V A+ +I IK+D + D +GISR Sbjct: 180 SALMMLFATIMEDNTSGQQENDNVEYPSKIYVKAAVDFITEKYMNKIKIDDIADFIGISR 239 Query: 316 SNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKA 375 S+L FK+E+G + + +LEKA SLL S+ IN I+ CGY F FK+ Sbjct: 240 SHLTGSFKKEMGVSPQEYLINFRLEKAASLLRSSKEQINIIAYQCGYEDSLSFSKAFKQK 299 Query: 376 YDTTPKEYRDVNSEV 390 + +PK +R++ E+ Sbjct: 300 FGMSPKSFRNLEVEL 314 >UniRef50_A7B8B1 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B8B1_RUMGN Length = 352 Score = 144 bits (363), Expect = 6e-33, Method: Composition-based stats. Identities = 41/158 (25%), Positives = 71/158 (44%), Gaps = 6/158 (3%) Query: 226 YLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDP 285 +L ++ +Q + + ++IL+ P E TD Sbjct: 193 FLGETPQILCSRAYQQGDDSSLLYEQTKAYAKGRSAEQILIVPQNAEE------GDGTDT 246 Query: 286 AVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSL 345 + + YIRNH + + + + +AV +S S L + +K + GE + I++ ++EKA+ L Sbjct: 247 LLKRVQTYIRNHYTERLTLADIAEAVHVSSSYLSRFYKLKAGENLFDTINSLRVEKAKEL 306 Query: 346 LISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEY 383 L+ I EI+ + G+ YF VFKK PKEY Sbjct: 307 LLRGDKKIYEIAALTGFEDTAYFSKVFKKYAGCPPKEY 344 >UniRef50_B0NDZ7 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NDZ7_EUBSP Length = 515 Score = 144 bits (363), Expect = 6e-33, Method: Composition-based stats. Identities = 27/128 (21%), Positives = 59/128 (46%) Query: 261 LQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEK 320 L+ + + + + + + + +I + + ++ + + + IS S+L + Sbjct: 378 LENTVNELFQYTKNQFNGSNGTQNRIIENTIKFIHQNLATALSLEVIAEHLHISASHLSR 437 Query: 321 RFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTP 380 FK+ E++ ++ ++EKA+ L + + EI+ GY YF S+FKK +P Sbjct: 438 TFKKYCDESLTEYVNKTRIEKAKEYLKDSNMLTYEIANQVGYNDATYFSSIFKKYTGFSP 497 Query: 381 KEYRDVNS 388 EYR + Sbjct: 498 SEYRQKYA 505 >UniRef50_A6TKQ3 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TKQ3_ALKMQ Length = 282 Score = 144 bits (363), Expect = 6e-33, Method: Composition-based stats. Identities = 45/208 (21%), Positives = 85/208 (40%), Gaps = 9/208 (4%) Query: 189 AVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAK 248 A T R +L + + P + ++ D + LS+ Q + + Sbjct: 77 ADTQDHVRVLLNFSKDYLLSSPYVIALL--DGLFMNNNYVIPFLSAEQQYVEVLLDKMIH 134 Query: 249 LLHRLLDKEEMPLQRILVPPV----RVIERRSTD---YRSLTDPAVIQAMHYIRNHACKG 301 + ++ LQ +L+ + R IE D S + Q + YI + Sbjct: 135 EIEHQSTGFQVALQALLMDLLVYTSRYIESNRHDVLAPPSQVHEKISQIVQYINTNYQTP 194 Query: 302 IKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCG 361 + + V +S+ L + FK+ G T I+ ++ +A+ LL T + +IS+ G Sbjct: 195 LTLSSVAQNFFVSQYYLSRTFKQATGFTFVEYINNIRIREAQRLLRETNHKVIDISEAVG 254 Query: 362 YPSLQYFYSVFKKAYDTTPKEYRDVNSE 389 + S+ +F VFK+ +P YR +N+E Sbjct: 255 FGSISHFGRVFKEVTRFSPLNYRRLNTE 282 >UniRef50_C6LAW9 Putative transcriptional regulator n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LAW9_9FIRM Length = 303 Score = 144 bits (363), Expect = 6e-33, Method: Composition-based stats. Identities = 52/221 (23%), Positives = 99/221 (44%), Gaps = 12/221 (5%) Query: 179 QTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQG 238 +P Q I A ++ P+P + + ++ E ++ + +V+ Sbjct: 66 SAVPHQLEIAAGHPCSILNLEFTVHTEKTPLPMQQ--LLEESAEFRKFWASRPPFAVSDD 123 Query: 239 ARQMGYQAAKLLHRLLDKEEMP-------LQRILVPPVRVIERRSTDYRSLTDPAVIQAM 291 R MGY LL RL + E P R+L+ RR + + + +A Sbjct: 124 QRSMGYSMKDLLSRLQKQPEQPDFLFRLLFYRMLLEMTWCFRRRRS---ASGLEYLKKAC 180 Query: 292 HYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTL 351 YI H + + + + G+++S L+ F + TI + I+ ++L +A LL +++L Sbjct: 181 DYIDRHLLEELSIPAIAACAGVNKSYLQALFSRTMHCTIGSYINQKRLNQAVFLLTNSSL 240 Query: 352 SINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSEVML 392 S+ +++ GY S Q+F F+K Y +P YR ++S +L Sbjct: 241 SVTDVAFASGYNSRQHFAHTFQKFYGISPSHYRRLHSRQLL 281 >UniRef50_C5RJF8 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RJF8_CLOCL Length = 305 Score = 144 bits (363), Expect = 6e-33, Method: Composition-based stats. Identities = 37/146 (25%), Positives = 73/146 (50%), Gaps = 10/146 (6%) Query: 243 GYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGI 302 G + L LL ++ + VIE + +D + + ++YI + K I Sbjct: 166 GIYSYANLKTLLQY----IKEEFMSMSEVIE------NNCSDNIMKRIVNYIDRNYYKDI 215 Query: 303 KVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGY 362 K++ + + + + L K FK E+ ++ + ++E A+ LL + +L + ++S+ GY Sbjct: 216 KLEMLAEIFNYNSAYLGKMFKNHTNESFNSYLDKIRIENAKKLLTNDSLKVYQVSEKVGY 275 Query: 363 PSLQYFYSVFKKAYDTTPKEYRDVNS 388 ++ YFYS FK+ +PKEY+ +N Sbjct: 276 KNIDYFYSKFKRYVGMSPKEYKKLNK 301 >UniRef50_UPI0001C35FBC two component transcriptional regulator, AraC family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35FBC Length = 508 Score = 144 bits (363), Expect = 7e-33, Method: Composition-based stats. Identities = 29/115 (25%), Positives = 55/115 (47%) Query: 270 RVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGET 329 R++ + +A+ YI+ + K + V++V +G + + F+ EVG T Sbjct: 389 RIVNSYEESRNGHYSANIRKALAYIQEYYAKDLLVEEVAAYIGKTPNYFSSIFRTEVGVT 448 Query: 330 IHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 ++ ++E+A+ L+ + + I EI++ GY YF VFKK +P R Sbjct: 449 FREYLNHYRIERAKELIEESDMMIYEIAEQVGYSDYTYFSQVFKKMTGISPTSMR 503 >UniRef50_C5VY46 AraC-family regulatory protein n=8 Tax=Streptococcus RepID=C5VY46_STRSE Length = 278 Score = 144 bits (363), Expect = 7e-33, Method: Composition-based stats. Identities = 39/191 (20%), Positives = 80/191 (41%), Gaps = 12/191 (6%) Query: 210 PEKLCVIGIDNEELTRYLSRVALSSVAQGARQMG--------YQAAKLLHRLLDKEEMPL 261 P + D + +L + LS Q ++ ++L K + L Sbjct: 88 PWTYIWLEFDGLKTEHFLRQAGLSKEQPIFSQREMPTSSPVYHEMKQILALHHQKSALVL 147 Query: 262 QRILVPPVRVIERRSTDYRSLTDP----AVIQAMHYIRNHACKGIKVDQVLDAVGISRSN 317 + + +I+ T S D + +A++++ + K I VD + ++R Sbjct: 148 GHLYLFISCLIDCSLTKTSSKHDENKEFYIREAINFVERNYEKAISVDDLAQVCNLNRHY 207 Query: 318 LEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYD 377 + FKE++ + I +L +A LL +TT ++ EI++ GY + F + FK+ Y Sbjct: 208 FSRLFKEQMNISPQQFIIQYRLSEACELLKNTTKTLQEIAEEIGYSNQFNFSTAFKRHYQ 267 Query: 378 TTPKEYRDVNS 388 +P +R ++ Sbjct: 268 ISPNRWRKIHK 278 >UniRef50_A8RR78 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RR78_9CLOT Length = 281 Score = 143 bits (362), Expect = 7e-33, Method: Composition-based stats. Identities = 39/158 (24%), Positives = 69/158 (43%), Gaps = 4/158 (2%) Query: 229 RVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIE-RRSTDYRSLTDPAV 287 R + + + Q L L +ILV R E RR + A+ Sbjct: 126 RPKIEELLAQMQDEEKQGDSYCQIQLCS---LLHQILVVLGRCQEARREGHALEEAEEAM 182 Query: 288 IQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLI 347 ++A Y+ H +G+ + QV +S + K+FK G ++ +++KA +L Sbjct: 183 VRAARYMNQHYQEGVTLGQVAAFANMSPTYFSKKFKSSTGLCFKEYLNYIRVQKASDMLR 242 Query: 348 STTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRD 385 +T LS+ ++ CG+ YF VF++ +P+EYR Sbjct: 243 NTDLSVTGVAMACGFSDGNYFGDVFRRLTGVSPREYRK 280 >UniRef50_UPI0001788EC5 two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788EC5 Length = 524 Score = 143 bits (362), Expect = 8e-33, Method: Composition-based stats. Identities = 46/165 (27%), Positives = 69/165 (41%), Gaps = 6/165 (3%) Query: 230 VALSSVAQGARQMGYQAA----KLLHRLLDKEEMP--LQRILVPPVRVIERRSTDYRSLT 283 V L Q + Y+ A K L LL E M + + + + E + Sbjct: 360 VKLEGHLQAMNEELYRMAGLELKNLDILLQFETMDDIFSWLRMKAMEISEMLKNRKSTKN 419 Query: 284 DPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKAR 343 V + + I+ + I + + + S + L FKEE G + ++E+AR Sbjct: 420 GRLVEEIIENIQARMHENITLRDMANRFSFSPNYLGVLFKEETGHNFSDYVIKLRMERAR 479 Query: 344 SLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNS 388 LL +T L I EI+ GY L YF FK+ Y TP EYR +S Sbjct: 480 DLLKTTKLKIYEIASQTGYQYLPYFSRQFKEMYGMTPLEYRRKHS 524 >UniRef50_A8RUC8 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RUC8_9CLOT Length = 479 Score = 143 bits (362), Expect = 8e-33, Method: Composition-based stats. Identities = 30/101 (29%), Positives = 54/101 (53%) Query: 284 DPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKAR 343 P + +A+H I + I ++ V + + I+ L + F +E+ + + + ++E+A+ Sbjct: 373 SPLIQKALHVIDKSYKEPISLNSVAEQLNITPQYLSRLFMKEMSRSFVDYLTSYRMERAK 432 Query: 344 SLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 SLL T + IN I GY +YF ++FKK TP +YR Sbjct: 433 SLLQDTNMKINMICVQVGYQDAKYFCTLFKKITGVTPNQYR 473 >UniRef50_A8RPA3 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A8RPA3_9CLOT Length = 339 Score = 143 bits (362), Expect = 8e-33, Method: Composition-based stats. Identities = 31/108 (28%), Positives = 57/108 (52%), Gaps = 1/108 (0%) Query: 285 PAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARS 344 + + + Y+ H + I V+ + S S+ K FK+ +G ++ +LEKA Sbjct: 233 ERMKRLLEYMEEHYGEKITVEDGAELCFYSNSHFMKYFKQYMGVPFIQYLNEFRLEKAAG 292 Query: 345 LLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSEVML 392 +L++T + ++Q CG+ ++ YF +F++ Y TP EYR N E+ L Sbjct: 293 MLLTTPDPVTAVAQRCGFDNISYFNRLFRRKYGKTPGEYRK-NGEIYL 339 >UniRef50_Q8ES65 Hypothetical conserved protein n=1 Tax=Oceanobacillus iheyensis RepID=Q8ES65_OCEIH Length = 517 Score = 143 bits (362), Expect = 8e-33, Method: Composition-based stats. Identities = 37/118 (31%), Positives = 64/118 (54%) Query: 271 VIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETI 330 ++++ + D + QA YI + IKV +V D + +S + FK++ GE Sbjct: 398 IMKKLAHHKLEKADWLIKQAERYINEYFRTTIKVQEVADVINVSSNYFSTLFKQKTGENF 457 Query: 331 HAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNS 388 + ++ ++E+A+SLLI+T ++EIS G+ +YF SVFKK TP YR + + Sbjct: 458 NEYVNKLRVEEAKSLLINTPFKVSEISIQVGFQEYKYFVSVFKKFSGLTPTNYRKLTA 515 >UniRef50_C6D659 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D659_PAESJ Length = 395 Score = 143 bits (362), Expect = 8e-33, Method: Composition-based stats. Identities = 28/113 (24%), Positives = 60/113 (53%) Query: 276 STDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIH 335 Y S +D ++ A+ YIR H + +++V V ++ + FK++ G + Sbjct: 275 YEHYASGSDQSIEVALQYIRTHYHADLSLEKVAAIVYLNPVYFSQLFKQKTGSGFKEYVI 334 Query: 336 AEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNS 388 +LE+A+ +L++ L + ++++ GY +++F +F+K Y TP E+R + Sbjct: 335 GLRLEQAKQMLLNPKLKLADVAERIGYQDMRHFSQLFRKKYGETPSEFRQRHR 387 >UniRef50_C6CXU8 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CXU8_PAESJ Length = 529 Score = 143 bits (362), Expect = 8e-33, Method: Composition-based stats. Identities = 40/154 (25%), Positives = 69/154 (44%), Gaps = 6/154 (3%) Query: 241 QMGYQAAKLLHRLLDKEEMPLQRIL-----VPPVRVIERRSTDYRSLTDPAVIQAMHYIR 295 QM ++ +H + D E + ++++ V +I + + Y + + +A YI Sbjct: 371 QMLNESGFSMHHVGDLEHLHSEQLIREFAKYQIVLLINQVTNWYNLDSRGNMEKAKSYIT 430 Query: 296 NHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLL-ISTTLSIN 354 +H + ++ V D V ++ K F E G T + ++ KA+ LL S+ Sbjct: 431 DHYADDLSLEVVADYVQLNPHYFSKLFHERCGITFVDYLTQVRISKAKELLAADFEQSLK 490 Query: 355 EISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNS 388 EIS GY YF VFKK +P E+R +S Sbjct: 491 EISMRVGYRDPNYFSRVFKKLTGLSPSEFRQTHS 524 >UniRef50_C0C2A1 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C2A1_9CLOT Length = 536 Score = 143 bits (361), Expect = 9e-33, Method: Composition-based stats. Identities = 41/221 (18%), Positives = 88/221 (39%), Gaps = 33/221 (14%) Query: 170 AQNRLADWLQTLPPQTGIIAVTDARARHILQVC--EHLHIPVPEKLCVIGIDNEELTRYL 227 + L L P + G + + + L + +I +P++ EL ++L Sbjct: 347 EMDDLERKLSESPAKDGRLVASVYKEVLTLFYFGTHNYNIEIPDQY-------PELLKHL 399 Query: 228 SRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAV 287 + A GY ++H L+ + E++ + + Sbjct: 400 EVLGTIHEA-----AGYLKRYMVHSLMH--------------WIEEKKY-----VESRPI 435 Query: 288 IQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLI 347 A +I + + ++ V +G + + FK+E G+ + ++E A+++L+ Sbjct: 436 RLARQFIGENYYLPLTLETVSREIGFNPTYFSGMFKKETGKNFSDYLKEIRIENAKNMLL 495 Query: 348 STTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNS 388 +T + +IS GY ++YF +FKK TP E+R + + Sbjct: 496 NTEQQVEDISFAVGYSDIKYFSRLFKKQTGVTPTEFRRLYN 536 >UniRef50_C6CZ23 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CZ23_PAESJ Length = 522 Score = 143 bits (361), Expect = 9e-33, Method: Composition-based stats. Identities = 32/104 (30%), Positives = 47/104 (45%) Query: 284 DPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKAR 343 + + + + YI H + + + ++ + S L F E +H +LEKA Sbjct: 417 NANMKRLLDYIHEHYAESLNLTEMAKHFHFNPSYLSSYFSTHHNEGFVDYLHRVRLEKAS 476 Query: 344 SLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVN 387 LL + SI+EIS M GY YF VFKK +P YR N Sbjct: 477 ELLRAGEASISEISGMVGYSDHSYFCKVFKKHTGLSPSRYRQQN 520 >UniRef50_A4XJ70 Transcriptional regulator, AraC family n=2 Tax=Clostridia RepID=A4XJ70_CALS8 Length = 286 Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats. Identities = 29/101 (28%), Positives = 52/101 (51%) Query: 285 PAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARS 344 + A+ +I ++ I +D + +S+ + FKE T I+ ++EKA Sbjct: 182 EKIKSALDFINSNYSSDIDIDLLAKLANLSKFYFCRLFKEITHLTPVDYINKFRVEKAIE 241 Query: 345 LLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRD 385 L+ +T LSI+EI+ G+ ++ YF VFK+ TP +Y+ Sbjct: 242 LIKNTNLSISEIAFEVGFNNVSYFIKVFKEYVGVTPFKYKK 282 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P0ACI5 Xylose operon regulatory protein n=151 Tax=Gamma... 438 e-121 UniRef50_A4A1D2 Xylose operon regulatory protein n=3 Tax=Plancto... 396 e-109 UniRef50_B3H2Y3 Xylose operon regulatory protein n=7 Tax=Gammapr... 388 e-106 UniRef50_P45043 Xylose operon regulatory protein n=26 Tax=Gammap... 382 e-104 UniRef50_A3ZY76 Xylose operon regulatory protein n=1 Tax=Blastop... 376 e-103 UniRef50_B4CYR5 Transcriptional regulator, AraC family n=2 Tax=V... 372 e-101 UniRef50_Q7UYL2 Xylose operon regulatory protein n=4 Tax=Plancto... 371 e-101 UniRef50_A6C655 Xylose operon regulatory protein n=1 Tax=Plancto... 363 6e-99 UniRef50_B2JFF0 Transcriptional regulator, AraC family n=39 Tax=... 361 2e-98 UniRef50_A6CF05 Xylose operon regulatory protein n=1 Tax=Plancto... 356 5e-97 UniRef50_A6CCU7 Xylose operon regulatory protein n=1 Tax=Plancto... 356 9e-97 UniRef50_A6C3C2 Xylose operon regulatory protein n=2 Tax=Plancto... 356 1e-96 UniRef50_C5BYV3 Transcriptional regulator, AraC family n=1 Tax=B... 353 5e-96 UniRef50_C1ZFQ8 Transcriptional regulator n=1 Tax=Planctomyces l... 353 8e-96 UniRef50_A6C615 Xylose operon regulatory protein n=1 Tax=Plancto... 350 6e-95 UniRef50_A3ZQ62 Xylose operon regulatory protein n=1 Tax=Blastop... 347 4e-94 UniRef50_C0A9R7 Xylose operon regulatory protein n=1 Tax=Opituta... 346 8e-94 UniRef50_B5JFL8 Transcriptional regulator, AraC family protein n... 346 1e-93 UniRef50_Q7UHK5 Xylose operon regulatory protein n=2 Tax=Plancto... 345 2e-93 UniRef50_Q64VG9 Transcriptional regulator n=8 Tax=Bacteroidales ... 344 2e-93 UniRef50_Q7UHJ2 Xylose operon regulatory protein n=1 Tax=Rhodopi... 344 3e-93 UniRef50_D2QUQ8 Transcriptional regulator, AraC family n=1 Tax=S... 341 2e-92 UniRef50_B5JIB2 Transcriptional regulator, AraC family protein n... 341 3e-92 UniRef50_A6CDQ7 Xylose operon regulatory protein n=1 Tax=Plancto... 339 7e-92 UniRef50_D2R7D2 Transcriptional regulator, AraC family n=1 Tax=P... 338 2e-91 UniRef50_Q7UXA9 Xylose operon regulatory protein n=1 Tax=Rhodopi... 337 4e-91 UniRef50_C1ZL78 Transcriptional regulator n=1 Tax=Planctomyces l... 334 4e-90 UniRef50_D1W5K7 Transcriptional regulator, AraC family n=1 Tax=P... 334 5e-90 UniRef50_C6W1V7 Transcriptional regulator, AraC family n=1 Tax=D... 331 3e-89 UniRef50_B1ZWW6 Transcriptional regulator, AraC family n=4 Tax=O... 330 4e-89 UniRef50_A6DIY5 Xylose operon regulatory protein n=1 Tax=Lentisp... 328 2e-88 UniRef50_UPI000174642C xylose operon regulatory protein n=3 Tax=... 323 6e-87 UniRef50_A3ZSV8 Xylose operon regulatory protein n=1 Tax=Blastop... 319 1e-85 UniRef50_C3QXL3 Transcriptional regulator n=7 Tax=Bacteroides Re... 319 2e-85 UniRef50_A6C7I7 Xylose operon regulatory protein n=1 Tax=Plancto... 315 2e-84 UniRef50_C0A1Z9 Xylose operon regulatory protein n=2 Tax=Opituta... 314 3e-84 UniRef50_C0A646 Xylose operon regulatory protein n=1 Tax=Opituta... 314 5e-84 UniRef50_A3ZWC2 Xylose operon regulatory protein n=1 Tax=Blastop... 312 1e-83 UniRef50_B1ZT55 Transcriptional regulator, AraC family n=1 Tax=O... 311 3e-83 UniRef50_A3ZWJ4 Xylose operon regulatory protein n=1 Tax=Blastop... 309 8e-83 UniRef50_B4D2S2 Transcriptional regulator, AraC family n=1 Tax=C... 304 2e-81 UniRef50_A3ZVD0 Xylose operon regulatory protein n=1 Tax=Blastop... 303 6e-81 UniRef50_B4CUN0 Transcriptional regulator, AraC family n=1 Tax=C... 291 3e-77 UniRef50_B5JEL5 Transcriptional regulator, AraC family protein n... 287 6e-76 UniRef50_A6DP72 Xylose operon regulatory protein n=1 Tax=Lentisp... 280 7e-74 UniRef50_A4BCC5 PurR protein n=1 Tax=Reinekea blandensis MED297 ... 275 2e-72 UniRef50_D2R9H5 Transcriptional regulator, AraC family n=1 Tax=P... 275 2e-72 UniRef50_UPI00019688DE hypothetical protein BACCELL_02763 n=1 Ta... 274 4e-72 UniRef50_A6DPD5 Xylose operon regulatory protein n=1 Tax=Lentisp... 272 1e-71 UniRef50_UPI0001745892 xylose operon regulatory protein n=1 Tax=... 266 7e-70 UniRef50_B5JIL8 Transcriptional regulator, AraC family protein n... 266 7e-70 UniRef50_D1N410 Transcriptional regulator, AraC family n=1 Tax=V... 265 2e-69 UniRef50_D1N888 Transcriptional regulator, AraC family n=1 Tax=V... 265 2e-69 UniRef50_C0AAZ9 Transcriptional regulator, AraC family n=1 Tax=O... 262 2e-68 UniRef50_C0ACC5 Transcriptional regulators-like protein n=1 Tax=... 259 9e-68 UniRef50_D1N1K4 Transcriptional regulator, AraC family n=1 Tax=V... 256 1e-66 UniRef50_C0A5R8 Transcriptional regulators-like protein n=1 Tax=... 254 5e-66 UniRef50_Q6LUY4 Putative uncharacterized protein n=1 Tax=Photoba... 252 1e-65 UniRef50_UPI000174567C xylose operon regulatory protein n=1 Tax=... 249 1e-64 UniRef50_C0A5A7 AraC-type DNA-binding domain-containing protein-... 240 5e-62 UniRef50_C0AC48 Transcriptional regulators-like protein n=1 Tax=... 220 8e-56 UniRef50_UPI00017895AE two component transcriptional regulator, ... 193 1e-47 UniRef50_A8RPD4 Putative uncharacterized protein n=1 Tax=Clostri... 189 2e-46 UniRef50_C0ET05 Putative uncharacterized protein n=2 Tax=Firmicu... 183 1e-44 UniRef50_B0ABU8 Putative uncharacterized protein n=1 Tax=Clostri... 183 1e-44 UniRef50_Q21A44 Two component transcriptional regulator, AraC fa... 182 2e-44 UniRef50_UPI0001789620 two component transcriptional regulator, ... 182 2e-44 UniRef50_UPI00016C020E hypothetical protein Epulo_10707 n=1 Tax=... 178 3e-43 UniRef50_C6IWJ3 Response regulator n=2 Tax=Bacillales RepID=C6IW... 177 8e-43 UniRef50_UPI0001788A43 two component transcriptional regulator, ... 176 1e-42 UniRef50_Q2RGN4 Two component transcriptional regulator, AraC fa... 176 1e-42 UniRef50_B0K3C5 Response regulator receiver protein n=4 Tax=Ther... 176 1e-42 UniRef50_C6D5X4 Two component transcriptional regulator, AraC fa... 175 3e-42 UniRef50_C6IWJ9 Transcriptional regulator n=1 Tax=Paenibacillus ... 175 3e-42 UniRef50_UPI0001B9ECE6 two component transcriptional regulator, ... 175 3e-42 UniRef50_C5D8H7 Two component transcriptional regulator, AraC fa... 174 4e-42 UniRef50_D1PMJ1 Transcriptional regulator, AraC family n=2 Tax=R... 173 7e-42 UniRef50_A6NS86 Putative uncharacterized protein n=1 Tax=Bactero... 173 7e-42 UniRef50_C9RVZ3 Two component transcriptional regulator, AraC fa... 173 8e-42 UniRef50_C7G788 Transcriptional regulator, AraC family n=2 Tax=B... 172 2e-41 UniRef50_A4XHB8 Two component transcriptional regulator, AraC fa... 172 2e-41 UniRef50_C6LLM9 Two-component response regulator n=1 Tax=Bryante... 172 3e-41 UniRef50_C3WEF1 Putative uncharacterized protein n=1 Tax=Fusobac... 171 3e-41 UniRef50_C6D4A8 Two component transcriptional regulator, AraC fa... 171 4e-41 UniRef50_C6LLK3 Putative two-component response regulator n=1 Ta... 171 5e-41 UniRef50_Q65NG7 Putative uncharacterized protein n=1 Tax=Bacillu... 171 5e-41 UniRef50_A9U7E9 Predicted protein n=1 Tax=Physcomitrella patens ... 170 6e-41 UniRef50_C6JEP4 Two component transcriptional regulator n=3 Tax=... 170 7e-41 UniRef50_A0Q2M6 Transcriptional regulatory protein n=6 Tax=Clost... 170 7e-41 UniRef50_A8RW54 Putative uncharacterized protein n=1 Tax=Clostri... 170 7e-41 UniRef50_C5RH22 Transcriptional regulator, AraC family n=1 Tax=C... 170 9e-41 UniRef50_C6LB63 Putative response regulator receiver domain prot... 170 1e-40 UniRef50_C4FUL3 Putative uncharacterized protein n=2 Tax=Catonel... 169 2e-40 UniRef50_UPI0001C368F3 two component transcriptional regulator, ... 169 2e-40 UniRef50_C6CRZ9 Two component transcriptional regulator, AraC fa... 168 3e-40 UniRef50_Q9KDT8 BH1123 protein n=1 Tax=Bacillus halodurans RepID... 168 3e-40 UniRef50_A4XFU2 Two component transcriptional regulator, AraC fa... 168 4e-40 UniRef50_UPI000178A7F3 two component transcriptional regulator, ... 167 5e-40 UniRef50_C5VY46 AraC-family regulatory protein n=8 Tax=Streptoco... 167 5e-40 UniRef50_C4ZBG0 Transcriptional regulator, AraC family n=5 Tax=C... 167 5e-40 UniRef50_D2LQR6 Transcriptional regulator, AraC family n=1 Tax=B... 167 6e-40 UniRef50_C0BFD5 Putative uncharacterized protein n=2 Tax=Clostri... 167 6e-40 UniRef50_C4ZBY6 Transcriptional regulator, AraC family n=7 Tax=C... 167 6e-40 UniRef50_B9MLQ2 Two component transcriptional regulator, AraC fa... 167 7e-40 UniRef50_B8I425 Two component transcriptional regulator, AraC fa... 167 7e-40 UniRef50_B0K339 Response regulator receiver protein n=9 Tax=Ther... 167 7e-40 UniRef50_C6LL33 Two-component response regulator n=1 Tax=Bryante... 167 7e-40 UniRef50_C6LM61 Putative raffinose operon transcriptional regula... 167 8e-40 UniRef50_C4Z204 AraC family transcriptional regulator, L-rhamnos... 167 1e-39 UniRef50_A6P0J9 Putative uncharacterized protein n=1 Tax=Bactero... 167 1e-39 UniRef50_C6QRS7 Two component transcriptional regulator, AraC fa... 166 1e-39 UniRef50_Q0SVP8 Transcriptional regulator, AraC family n=3 Tax=C... 166 2e-39 UniRef50_UPI0001787D2D two component transcriptional regulator, ... 166 2e-39 UniRef50_B2GEN0 Transcriptional regulator n=1 Tax=Lactobacillus ... 165 2e-39 UniRef50_B0K234 Response regulator receiver protein n=8 Tax=Ther... 165 2e-39 UniRef50_B0PG61 Putative uncharacterized protein n=1 Tax=Anaerot... 165 2e-39 UniRef50_A6M1S5 Transcriptional regulator, AraC family n=1 Tax=C... 165 2e-39 UniRef50_A8SRM1 Putative uncharacterized protein n=1 Tax=Coproco... 165 2e-39 UniRef50_C5EK80 Putative uncharacterized protein n=2 Tax=Clostri... 165 2e-39 UniRef50_Q2BDI9 Two-component response regulator n=2 Tax=Firmicu... 165 3e-39 UniRef50_C6D6F5 Transcriptional regulator, AraC family n=1 Tax=P... 163 7e-39 UniRef50_C1I3A1 Response regulator receiver protein n=1 Tax=Clos... 163 7e-39 UniRef50_C3RN82 Transcriptional regulator n=2 Tax=Bacteria RepID... 163 8e-39 UniRef50_C0CGQ4 Putative uncharacterized protein n=1 Tax=Blautia... 163 8e-39 UniRef50_A8SBA6 Putative uncharacterized protein n=1 Tax=Faecali... 163 1e-38 UniRef50_C7IHL5 Transcriptional regulator, AraC family n=1 Tax=C... 162 2e-38 UniRef50_C7GGB1 Putative two-component response regulator n=1 Ta... 162 2e-38 UniRef50_A4XMI8 Two component transcriptional regulator, AraC fa... 162 2e-38 UniRef50_B3EYL7 Two-component response regulator n=5 Tax=Firmicu... 162 3e-38 UniRef50_A4XJL7 Transcriptional regulator, AraC family n=2 Tax=C... 162 3e-38 UniRef50_C9RT55 Two component transcriptional regulator, AraC fa... 161 3e-38 UniRef50_A5Z5Z2 Putative uncharacterized protein n=1 Tax=Eubacte... 161 4e-38 UniRef50_A4XMF1 Two component transcriptional regulator, AraC fa... 161 4e-38 UniRef50_C5RL17 Transcriptional regulator, AraC family n=2 Tax=C... 161 4e-38 UniRef50_C4Z3B2 Two-component system, response regulator YesN n=... 161 4e-38 UniRef50_C9KND9 Transcriptional regulator, AraC family n=1 Tax=M... 161 4e-38 UniRef50_B8HZZ5 Two component transcriptional regulator, AraC fa... 161 5e-38 UniRef50_C1P7P5 Transcriptional regulator, AraC family n=1 Tax=B... 160 6e-38 UniRef50_C4ZBY2 Two-component response regulator n=4 Tax=Clostri... 160 8e-38 UniRef50_C6CVC0 Two component transcriptional regulator, AraC fa... 160 9e-38 UniRef50_A7B7P4 Putative uncharacterized protein n=1 Tax=Ruminoc... 160 9e-38 UniRef50_A6TRZ8 Response regulator receiver protein n=1 Tax=Alka... 160 9e-38 UniRef50_C6CT66 Two component transcriptional regulator, AraC fa... 160 9e-38 UniRef50_UPI0001C36936 two component transcriptional regulator, ... 160 1e-37 UniRef50_C5ETL2 Two component transcriptional regulator n=1 Tax=... 160 1e-37 UniRef50_C0C2A1 Putative uncharacterized protein n=1 Tax=Clostri... 160 1e-37 UniRef50_UPI0001851370 two component AraC family transcriptional... 160 1e-37 UniRef50_A6TKQ3 Helix-turn-helix-domain containing protein, AraC... 159 1e-37 UniRef50_C6CXU8 Two component transcriptional regulator, AraC fa... 159 1e-37 UniRef50_C0CVY3 Putative uncharacterized protein n=1 Tax=Clostri... 159 2e-37 UniRef50_C6IY76 Two component transcriptional regulator n=1 Tax=... 159 2e-37 UniRef50_A9KIW0 Transcriptional regulator, AraC family n=1 Tax=C... 159 2e-37 UniRef50_A5Z5R3 Putative uncharacterized protein n=1 Tax=Eubacte... 159 2e-37 UniRef50_B9XAQ1 Transcriptional regulator, AraC family n=2 Tax=V... 159 2e-37 UniRef50_C6J7M7 Response regulator n=2 Tax=Bacillales RepID=C6J7... 158 2e-37 UniRef50_A9WH32 Sensor protein n=2 Tax=Chloroflexus RepID=A9WH32... 158 3e-37 UniRef50_C5ENT8 Two component transcriptional regulator n=2 Tax=... 158 3e-37 UniRef50_C6D490 Two component transcriptional regulator, AraC fa... 158 3e-37 UniRef50_C6LII8 Two-component response regulator n=1 Tax=Bryante... 158 3e-37 UniRef50_UPI0001788F54 two component transcriptional regulator, ... 158 3e-37 UniRef50_C9KMM2 Putative methylphosphotriester-DNA alkyltransfer... 158 3e-37 UniRef50_C5EHL9 Predicted protein n=1 Tax=Clostridiales bacteriu... 158 4e-37 UniRef50_UPI0001788C4E two component transcriptional regulator, ... 158 4e-37 UniRef50_A8SS64 Putative uncharacterized protein n=1 Tax=Coproco... 158 4e-37 UniRef50_O31522 HTH-type transcriptional regulator yesS n=2 Tax=... 158 4e-37 UniRef50_B0NX83 Putative uncharacterized protein n=1 Tax=Clostri... 157 5e-37 UniRef50_C5EPF6 Two component transcriptional regulator n=4 Tax=... 157 5e-37 UniRef50_C6CX81 Transcriptional regulator, AraC family n=1 Tax=P... 157 5e-37 UniRef50_C6D127 Two component transcriptional regulator, AraC fa... 157 5e-37 UniRef50_C6J070 Two component transcriptional regulator n=1 Tax=... 157 6e-37 UniRef50_B8I0Y2 Two component transcriptional regulator, AraC fa... 157 6e-37 UniRef50_A8SGH8 Putative uncharacterized protein n=2 Tax=Bacteri... 157 6e-37 UniRef50_UPI0001788789 transcriptional regulator, AraC family n=... 157 6e-37 UniRef50_UPI000178A7F2 two component transcriptional regulator, ... 157 7e-37 UniRef50_C6LHJ3 Two-component response regulator n=2 Tax=Clostri... 157 7e-37 UniRef50_C6JBV9 Two component transcriptional regulator n=1 Tax=... 157 8e-37 UniRef50_C6CVE0 Two component transcriptional regulator, AraC fa... 157 9e-37 UniRef50_UPI0001C358FB two component transcriptional regulator, ... 157 1e-36 UniRef50_A9KQP4 Two component transcriptional regulator, AraC fa... 157 1e-36 UniRef50_C6JCU5 Two component transcriptional regulator n=2 Tax=... 157 1e-36 UniRef50_C6CT83 Two component transcriptional regulator, AraC fa... 156 1e-36 UniRef50_A4XMH2 Two component transcriptional regulator, AraC fa... 156 1e-36 UniRef50_UPI0001C36BEF two component AraC family transcriptional... 156 1e-36 UniRef50_A9KJM4 Two component transcriptional regulator, AraC fa... 156 1e-36 UniRef50_A8RUC8 Putative uncharacterized protein n=1 Tax=Clostri... 156 2e-36 UniRef50_A4XMG0 Two component transcriptional regulator, AraC fa... 156 2e-36 UniRef50_C5RGS5 Transcriptional regulator, AraC family n=1 Tax=C... 156 2e-36 UniRef50_B5CXD1 Putative uncharacterized protein n=1 Tax=Bactero... 156 2e-36 UniRef50_Q5WL10 AraC/XylS family transcriptional regulator n=1 T... 156 2e-36 UniRef50_C9KN80 Transcriptional regulator, AraC family n=1 Tax=M... 156 2e-36 UniRef50_B0NGA4 Putative uncharacterized protein n=1 Tax=Clostri... 155 2e-36 UniRef50_Q9K9C1 Two-component response regulator n=1 Tax=Bacillu... 155 2e-36 UniRef50_A4ITD0 Sugar ABC transporter (Permease) n=3 Tax=Bacilla... 155 2e-36 UniRef50_A7VRD3 Putative uncharacterized protein n=1 Tax=Clostri... 155 2e-36 UniRef50_C6J0N4 Response regulator n=1 Tax=Paenibacillus sp. ora... 155 2e-36 UniRef50_C3QA40 Putative uncharacterized protein n=3 Tax=Bactero... 155 2e-36 UniRef50_C6JD25 Response regulator receiver protein n=1 Tax=Rumi... 155 2e-36 UniRef50_A8RKC7 Putative uncharacterized protein n=1 Tax=Clostri... 155 2e-36 UniRef50_C6CTP9 Two component transcriptional regulator, AraC fa... 155 2e-36 UniRef50_C8P1S0 AraC family DNA-binding response regulator n=1 T... 155 2e-36 UniRef50_C6IY53 Two component transcriptional regulator n=1 Tax=... 155 2e-36 UniRef50_C2H3H7 Response regulator n=23 Tax=Enterococcus faecali... 155 2e-36 UniRef50_B8I0K9 Two component transcriptional regulator, AraC fa... 155 2e-36 UniRef50_A6CLV0 AraC-type DNA-binding domain-containing protein ... 155 3e-36 UniRef50_A9U777 Predicted protein n=1 Tax=Physcomitrella patens ... 155 3e-36 UniRef50_B0P6G3 Putative uncharacterized protein n=1 Tax=Anaerot... 155 3e-36 UniRef50_A3DK80 Two component transcriptional regulator, AraC fa... 155 3e-36 UniRef50_Q2RJ70 Transcriptional regulator, AraC family n=1 Tax=M... 155 3e-36 UniRef50_C6D3S3 Two component transcriptional regulator, AraC fa... 155 3e-36 UniRef50_C2KWQ1 AraC family transcriptional regulator n=1 Tax=Or... 155 3e-36 UniRef50_UPI0001788EC5 two component transcriptional regulator, ... 155 3e-36 UniRef50_A8ML53 Transcriptional regulator, AraC family n=1 Tax=A... 155 3e-36 UniRef50_UPI0001C35FBC two component transcriptional regulator, ... 155 3e-36 UniRef50_C5EU48 Response regulator receiver protein n=4 Tax=Clos... 155 4e-36 UniRef50_B8FQG3 Transcriptional regulator, AraC family n=2 Tax=D... 154 4e-36 UniRef50_B0NDZ7 Putative uncharacterized protein n=1 Tax=Clostri... 154 4e-36 UniRef50_B7GJK9 DNA-binding response regulator (Contains REC and... 154 5e-36 UniRef50_C6J482 Two component transcriptional regulator n=1 Tax=... 154 5e-36 UniRef50_B6FKZ8 Putative uncharacterized protein n=1 Tax=Clostri... 154 5e-36 UniRef50_A6NRT4 Putative uncharacterized protein n=1 Tax=Bactero... 154 5e-36 UniRef50_B0A7Q6 Putative uncharacterized protein n=1 Tax=Clostri... 154 5e-36 UniRef50_B1QUU6 Two-component response regulator n=3 Tax=Clostri... 154 5e-36 UniRef50_C6D708 Transcriptional regulator, AraC family n=1 Tax=P... 154 6e-36 UniRef50_C7H4C8 Two Component Transcriptional Regulator, AraC fa... 154 6e-36 UniRef50_C9BAM1 Helix-turn-helix domain-containing protein n=12 ... 154 6e-36 UniRef50_Q05587 Regulatory protein pocR n=57 Tax=Gammaproteobact... 153 7e-36 UniRef50_C6CWF4 Two component transcriptional regulator, AraC fa... 153 8e-36 UniRef50_C6CVZ4 Transcriptional regulator, AraC family n=1 Tax=P... 153 8e-36 UniRef50_C6LGW7 DNA-binding response regulator n=1 Tax=Bryantell... 153 8e-36 UniRef50_Q5QL43 Two-component response regulator n=2 Tax=Geobaci... 153 9e-36 UniRef50_B1B7W8 Transcriptional regulator, AraC family protein n... 153 9e-36 UniRef50_C6CY25 Two component transcriptional regulator, AraC fa... 153 9e-36 UniRef50_C7H5Z6 Transcription regulator, AraC family n=2 Tax=Rum... 153 9e-36 UniRef50_A6M2F4 Response regulator receiver protein n=1 Tax=Clos... 153 9e-36 UniRef50_UPI0001C3678C two component transcriptional regulator, ... 153 1e-35 UniRef50_C6CSY2 Two component transcriptional regulator, AraC fa... 153 1e-35 UniRef50_A3DHI5 Transcriptional regulator, AraC family n=5 Tax=C... 153 1e-35 UniRef50_A8RMQ2 Putative uncharacterized protein n=1 Tax=Clostri... 153 1e-35 UniRef50_Q65KY8 Probable transcriptional regulator n=1 Tax=Bacil... 153 1e-35 UniRef50_C6CXJ2 Transcriptional regulator, AraC family n=1 Tax=P... 153 1e-35 UniRef50_C6J6V9 Response regulator n=2 Tax=Bacillales RepID=C6J6... 153 1e-35 UniRef50_C6J4K9 Two component transcriptional regulator n=1 Tax=... 153 1e-35 UniRef50_C5RJU1 Two component transcriptional regulator, AraC fa... 153 1e-35 UniRef50_B5YFJ6 Transcriptional regulator, putative n=2 Tax=Dict... 153 1e-35 UniRef50_C0FTY3 Putative uncharacterized protein n=1 Tax=Rosebur... 153 1e-35 UniRef50_A5ZMK6 Putative uncharacterized protein n=1 Tax=Ruminoc... 153 1e-35 Sequences not found previously or not previously below threshold: UniRef50_B1BNT9 Transcriptional regulator, AraC family n=4 Tax=C... 157 7e-37 UniRef50_C5EPZ4 Two component transcriptional regulator n=3 Tax=... 157 7e-37 UniRef50_B8D1C2 Transcriptional regulator, AraC family n=1 Tax=H... 157 1e-36 UniRef50_B1SDU2 Putative uncharacterized protein n=1 Tax=Strepto... 154 4e-36 >UniRef50_P0ACI5 Xylose operon regulatory protein n=151 Tax=Gammaproteobacteria RepID=XYLR_ECO57 Length = 392 Score = 438 bits (1126), Expect = e-121, Method: Composition-based stats. Identities = 392/392 (100%), Positives = 392/392 (100%) Query: 1 MFTKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARIDKIKDWLGDGV 60 MFTKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARIDKIKDWLGDGV Sbjct: 1 MFTKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARIDKIKDWLGDGV 60 Query: 61 IADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVN 120 IADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVN Sbjct: 61 IADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVN 120 Query: 121 RFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQT 180 RFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQT Sbjct: 121 RFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQT 180 Query: 181 LPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGAR 240 LPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGAR Sbjct: 181 LPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGAR 240 Query: 241 QMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACK 300 QMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACK Sbjct: 241 QMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACK 300 Query: 301 GIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMC 360 GIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMC Sbjct: 301 GIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMC 360 Query: 361 GYPSLQYFYSVFKKAYDTTPKEYRDVNSEVML 392 GYPSLQYFYSVFKKAYDTTPKEYRDVNSEVML Sbjct: 361 GYPSLQYFYSVFKKAYDTTPKEYRDVNSEVML 392 >UniRef50_A4A1D2 Xylose operon regulatory protein n=3 Tax=Planctomycetaceae RepID=A4A1D2_9PLAN Length = 390 Score = 396 bits (1018), Expect = e-109, Method: Composition-based stats. Identities = 124/388 (31%), Positives = 205/388 (52%), Gaps = 12/388 (3%) Query: 4 KRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFR--ARIDKIKDWLGDGVI 61 +R R+ L+ + Y R+V+ G+ Y+ + W I+++ ++ W GDG+I Sbjct: 2 QRRRVMLIVETSLVYGREVLRGINRYV-VANEPWSIYVDLRELVVRPPAWLEKWEGDGII 60 Query: 62 ADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNR 121 + + L + +P V + Y + I T++ A+ + HL E+G Sbjct: 61 TRSTTPSLAEKLRALKIPTVDLTDIY----GSQGLPQIGTNHEAVGKMGAQHLLERGFRH 116 Query: 122 FAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQ--GLETAPENWQHAQNRLADWLQ 179 FAF G +G W++ R+ F+ +V + + YQ T W Q+++ WL+ Sbjct: 117 FAFCGF---TGHNWSSRRQEGFKTVVTKAGFDFHQYQSPWDTTTALTWDEQQSQIVRWLE 173 Query: 180 TLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGA 239 +LP GI+A D R +H+L C + + VPE++ VIG+DN+EL L LSS+ Sbjct: 174 SLPRPAGIMACNDMRGQHVLDACRRIGVAVPEEIAVIGVDNDELVCDLCDPPLSSIMPNP 233 Query: 240 RQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHAC 299 +++GY+AA +L L+ E+ L+ P+ V+ R+STD ++ DP V A+ YIR HAC Sbjct: 234 QRIGYEAASMLDALMRGEKPKQMNKLIEPIGVVTRQSTDVLAIDDPLVASAVKYIRQHAC 293 Query: 300 KGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQM 359 GI V++VL V +SRS LE+RF++ +G + + I A +L++ R LL T L + I+ + Sbjct: 294 DGISVEEVLKQVPVSRSILERRFRKYIGRSPQSEIRAVQLKRVRQLLRETDLPLERIATL 353 Query: 360 CGYPSLQYFYSVFKKAYDTTPKEYRDVN 387 GY +Y VFK+ TP +YR N Sbjct: 354 AGYDHPEYMSVVFKRELGQTPGQYRTQN 381 >UniRef50_B3H2Y3 Xylose operon regulatory protein n=7 Tax=Gammaproteobacteria RepID=B3H2Y3_ACTP7 Length = 405 Score = 388 bits (998), Expect = e-106, Method: Composition-based stats. Identities = 219/392 (55%), Positives = 300/392 (76%) Query: 1 MFTKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARIDKIKDWLGDGV 60 M K RI L FNANK YDRQV+EG+G+Y+QASQ W+IF+++DF R ++ L DG+ Sbjct: 13 MEKKSFRIALCFNANKVYDRQVIEGIGQYIQASQCIWNIFMQDDFTYRKQDLEGLLIDGI 72 Query: 61 IADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVN 120 IADFDD + L+D+++P++ VGGSY + YP + Y+ATDNYALVE+A LHLK+KG+N Sbjct: 73 IADFDDPETAALLSDMNIPVIAVGGSYQNPDYYPHIPYVATDNYALVETALLHLKQKGIN 132 Query: 121 RFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQT 180 RFAFYG+P K W+ ER+ AF L+ + +++ +Y G + +NW AQ+ L++WL + Sbjct: 133 RFAFYGIPSDEQKHWSVERKNAFIDLMEKYEHQTNIYLGHQVNAQNWLEAQSALSEWLAS 192 Query: 181 LPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGAR 240 LP QTGIIAVTDARARH+LQ CE+L+I VPE++ VIGIDNEEL ++LSRV+LSSV QG + Sbjct: 193 LPAQTGIIAVTDARARHLLQACEYLNIAVPEQISVIGIDNEELIQHLSRVSLSSVMQGTK 252 Query: 241 QMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACK 300 Q+GYQAAK+LH L + +++ +L+PP+RV +RRSTD+++ DP VIQAMHYI ++ACK Sbjct: 253 QIGYQAAKMLHHLFEGKKLSHSPVLIPPLRVEQRRSTDFQAFQDPFVIQAMHYIHHNACK 312 Query: 301 GIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMC 360 GIK +QVLD + ISRSNLE+RFK E+ +TIH +IH EKL +A+ +L T +SI EIS++C Sbjct: 313 GIKTEQVLDHLRISRSNLEQRFKHELNKTIHQVIHEEKLNRAKYMLQFTDISIQEISEIC 372 Query: 361 GYPSLQYFYSVFKKAYDTTPKEYRDVNSEVML 392 GYPSL YFYSVFKK Y TPK +R + ++++ Sbjct: 373 GYPSLPYFYSVFKKEYADTPKAFRQSHHKILV 404 >UniRef50_P45043 Xylose operon regulatory protein n=26 Tax=Gammaproteobacteria RepID=XYLR_HAEIN Length = 387 Score = 382 bits (982), Expect = e-104, Method: Composition-based stats. Identities = 220/384 (57%), Positives = 287/384 (74%) Query: 1 MFTKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARIDKIKDWLGDGV 60 M + ++I LLFNANK YDRQVVEG+G+Y+QASQ WDIF+E++F D I DG+ Sbjct: 1 MTEQYYKIALLFNANKVYDRQVVEGIGQYIQASQCMWDIFVEDEFIYHTDTINQLSIDGI 60 Query: 61 IADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVN 120 IADFDD + + L +P + VGGSY A+ YP YIATDN ALVE A HL+EKG++ Sbjct: 61 IADFDDPKTVELLQHTLIPTIAVGGSYKQADFYPHFPYIATDNMALVEMALSHLQEKGLS 120 Query: 121 RFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQT 180 +FAFYGL ++ K W+ ER AF +L+ + Y +Y+G++ +NW Q +L WL++ Sbjct: 121 QFAFYGLQVNTHKHWSIERRDAFVELMEKNHYPIYLYEGVQVHAQNWLEEQQKLIVWLKS 180 Query: 181 LPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGAR 240 LP TGIIAVTDARARH+LQ CE+ I VPE+LCV+GIDNEEL +YLSR++LSSV QG R Sbjct: 181 LPSHTGIIAVTDARARHLLQACEYSKIAVPEELCVVGIDNEELIQYLSRMSLSSVEQGTR 240 Query: 241 QMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACK 300 ++GYQAAKLLH+LL+ +++ IL+PP+ V R STDYRSLTDP VIQAMHYIR+ AC Sbjct: 241 EIGYQAAKLLHKLLNGQKVSHTPILIPPITVHSRNSTDYRSLTDPLVIQAMHYIRHRACH 300 Query: 301 GIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMC 360 IKV QVLD + SRSNLE+RFK E+ +TIH +IH EK+ +A++LL T +SI EI+++C Sbjct: 301 RIKVGQVLDHLETSRSNLEQRFKNEMNKTIHQVIHEEKISRAKNLLQQTDISIKEITEIC 360 Query: 361 GYPSLQYFYSVFKKAYDTTPKEYR 384 GYPS+QYFYSVFKK ++ TPKE+R Sbjct: 361 GYPSIQYFYSVFKKEFEMTPKEFR 384 >UniRef50_A3ZY76 Xylose operon regulatory protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZY76_9PLAN Length = 387 Score = 376 bits (967), Expect = e-103, Method: Composition-based stats. Identities = 120/392 (30%), Positives = 189/392 (48%), Gaps = 10/392 (2%) Query: 2 FTKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDF--RARIDKIKDWLGDG 59 R+ LL ++ Y R ++ G+ + + W I+ + + +W GDG Sbjct: 1 MNSSLRVALLIETSREYGRGLLRGISRFQR-EHGPWSIYFQPRGANEPVPTWLANWNGDG 59 Query: 60 VIADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGV 119 ++A +D+++ QA+ VP V + A + + DN ALV A H ++G Sbjct: 60 ILARVEDRRMAQAIQKTGVPAVDL----RFAVPNLKMPGVGVDNLALVSLALDHFLDRGF 115 Query: 120 NRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVY--QGLETAPENWQHAQNRLADW 177 RFAF G P W R F LV ++ YR V+ P W+ Q +L W Sbjct: 116 TRFAFCGYPTG-EFIWMDLRAKLFHDLVVQKGYRCEVFPQDLKIAKPRTWEQDQRQLVRW 174 Query: 178 LQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQ 237 ++ L I+A D+R + +L C VP L V+G+DN+E LS LSS+ Sbjct: 175 IRKLEKPVAIMACNDSRGQQLLDACRRAEADVPNDLSVLGVDNDEFLCGLSTPPLSSIDI 234 Query: 238 GARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNH 297 ++GY AA+LL L++ P + +L P VI RRSTD ++ D + Y R + Sbjct: 235 NTERIGYYAAELLQSLMNGAPAPSEPVLFPAEAVIARRSTDSFAVEDEEFAAVLRYFREN 294 Query: 298 ACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEIS 357 AC+GI++ + A G+ R LE+R K +G + + K+E++R LL+ T +SI I+ Sbjct: 295 ACQGIRMADITKATGMERRTLERRMKSTLGRSPKDELIRIKIEESRRLLVRTDMSIKNIA 354 Query: 358 QMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSE 389 Q G+ + +YF VF+ TTP YR E Sbjct: 355 QAAGFSNSRYFSRVFQSRVGTTPLAYRKSTHE 386 >UniRef50_B4CYR5 Transcriptional regulator, AraC family n=2 Tax=Verrucomicrobia RepID=B4CYR5_9BACT Length = 406 Score = 372 bits (956), Expect = e-101, Method: Composition-based stats. Identities = 123/385 (31%), Positives = 196/385 (50%), Gaps = 10/385 (2%) Query: 2 FTKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRA--RIDKIKDWLGDG 59 T+ ++ LL + AY R+++ GV EY++ W++ + E R + DW GDG Sbjct: 10 TTRPPKVALLVETSNAYARELLLGVKEYIRV-HGPWNVHLSEHSRGDRPPSWLIDWDGDG 68 Query: 60 VIADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGV 119 VIA ++KQI +AL + VP+V +LA + TDN A+ AF H E+G Sbjct: 69 VIARVENKQIARALEALRVPVVDFSSHRYLA----GAPVVTTDNAAIARLAFDHFIERGF 124 Query: 120 NRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQ 179 FA+ G+ W+ R F +LV Y + + +A WL+ Sbjct: 125 QHFAYCGVD---RFAWSVARGGHFDELVRRAGLICEHYADPAGFGPDSDAETDAIAQWLR 181 Query: 180 TLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGA 239 LP + A DAR + +L C+ + VP+++ V+G+DN+ L LS LSSV Sbjct: 182 GLPAPVAVFACYDARGQQLLDACQRAGLAVPDQIAVLGVDNDSLLCELSPPPLSSVMLDT 241 Query: 240 RQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHAC 299 R+ G++AA LL RL+ + + +PP+ V R+STD ++ DP + + + IR AC Sbjct: 242 RRTGWEAADLLSRLMQGQRTKAEVHRIPPLGVFTRQSTDIHAVEDPKIARVLQIIREQAC 301 Query: 300 KGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQM 359 G+ V ++L +SR LE+R KE +G H I ++ + + LL +T LS+ EI++ Sbjct: 302 AGLTVPELLRKCPMSRRVLEQRMKEVLGRAPHEEIVRVQIRRVQDLLRTTELSLEEIAER 361 Query: 360 CGYPSLQYFYSVFKKAYDTTPKEYR 384 G+ + QY VFK+ P E+R Sbjct: 362 SGFRNAQYLSVVFKREVGQPPSEFR 386 >UniRef50_Q7UYL2 Xylose operon regulatory protein n=4 Tax=Planctomycetaceae RepID=Q7UYL2_RHOBA Length = 391 Score = 371 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 123/393 (31%), Positives = 209/393 (53%), Gaps = 12/393 (3%) Query: 2 FTKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFI--EEDFRARIDKIKDWLGDG 59 K+ + LL + AY R ++ G+ Y+ W I++ +E A + DW GDG Sbjct: 7 MPKQKAVALLIETSNAYARGLLGGIASYIH-EHDLWSIYLVEQERGAAPPSWLNDWDGDG 65 Query: 60 VIADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGV 119 +IA ++++I ++ ++ +P+V V + + P + ++ T++ A+ E A+ H +E+G Sbjct: 66 LIARIENEEIASSVRNLKIPVVDVSAARRI----PNIPWVETNDVAIGELAYQHFRERGF 121 Query: 120 NRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQ--GLETAPENWQHAQNRLADW 177 FAF G S W+ R AF V E+ ++ + + P++ + ++RLA+W Sbjct: 122 ENFAFCG---ESRFNWSILRRQAFEARVKEDGFQCQSFNFNVDDRRPQSLKRERDRLAEW 178 Query: 178 LQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQ 237 + +L G++A D A+ IL VC I VP +L ++G+DN+EL L LSSV Sbjct: 179 VLSLQHPIGVLACYDIMAQKILDVCRLHGIKVPSELALLGVDNDELLCDLCTPPLSSVVP 238 Query: 238 GARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNH 297 A Q G +AA LL ++ EE+ + L+ P+ V R+STD ++ DP + A+ +IR+H Sbjct: 239 AAHQTGREAASLLDAMMRGEEVHAEPHLIEPLGVATRQSTDVLAIKDPEIAAAVRFIRDH 298 Query: 298 ACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEIS 357 C GI V V+ V +SR E RF +G T H I ++E+ R LLI T L++ +IS Sbjct: 299 CCDGINVQDVVKKVPLSRRVFESRFLALMGRTPHQEITRRRIERVRYLLIETDLTLVQIS 358 Query: 358 QMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSEV 390 + G+ + +Y F++A P YR ++ Sbjct: 359 RRTGFQNHEYMSVAFRRAMGHPPATYRRKFRKI 391 >UniRef50_A6C655 Xylose operon regulatory protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C655_9PLAN Length = 381 Score = 363 bits (932), Expect = 6e-99, Method: Composition-based stats. Identities = 119/382 (31%), Positives = 191/382 (50%), Gaps = 10/382 (2%) Query: 12 FNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRA--RIDKIKDWLGDGVIADFDDKQI 69 ++ Y R ++ GV +Y+Q W I I W GDG+IA D + Sbjct: 1 METSRGYGRGILHGVWQYIQ-EHETWSILYRPCGFGQVAPSWISSWDGDGIIAFIDTAKT 59 Query: 70 EQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRFAFYGLPE 129 + L VP V + G P V ++A DN + E A + ++G FA G Sbjct: 60 ARLLKQSGVPTVDLLGEL---IPKPQVPFVAPDNQQVAELAVQYFLDRGYQSFAACGFRT 116 Query: 130 SSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAP--ENWQHAQNRLADWLQTLPPQTGI 187 + +R F+Q + E ++ +W+ Q ++A WLQ LP + Sbjct: 117 G-LRPMLDQRCLKFQQQIQETGAECALFTPRGGGKEGPSWEREQEQIARWLQGLPKPLAL 175 Query: 188 IAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAA 247 D R R +L C+ +I VPE++ V+G+ N+++ LS LSS+ +++GYQAA Sbjct: 176 FTCNDTRGREVLNACQTHNISVPEEVAVLGVGNDDILCQLSDERLSSIDVDPQRVGYQAA 235 Query: 248 KLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQV 307 +L L+ ++ +P +PP RV+ R STD ++TDP + A+ YIR +AC+ I+V+ V Sbjct: 236 AVLDSLMHQKPVPDLT-FIPPRRVVSRHSTDSLAVTDPELATAIQYIRRYACRQIQVEDV 294 Query: 308 LDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQY 367 + V + R LE+RF++ +G + A I +L +AR LL TTLS EI+ CG+ S Y Sbjct: 295 VKQVNLERRVLERRFRKLLGRSPKAEIIRLQLVRARELLAETTLSNTEIAYRCGFNSAAY 354 Query: 368 FYSVFKKAYDTTPKEYRDVNSE 389 F +F++ TP E+R + Sbjct: 355 FMDLFRRKVGQTPGEFRQTSQS 376 >UniRef50_B2JFF0 Transcriptional regulator, AraC family n=39 Tax=cellular organisms RepID=B2JFF0_BURP8 Length = 414 Score = 361 bits (927), Expect = 2e-98, Method: Composition-based stats. Identities = 195/385 (50%), Positives = 261/385 (67%), Gaps = 1/385 (0%) Query: 3 TKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARIDKIKDWLGDGVIA 62 + HRI LLFNANK YDR+++ G+G YL +++ WD+F+EEDFRAR++ I+ + GDG IA Sbjct: 8 QRTHRIALLFNANKVYDREIITGIGNYLLSTRVAWDLFLEEDFRARLNGIEHFEGDGFIA 67 Query: 63 DFDDKQIEQALADVDVPIVGVGGSYHLAESYPP-VHYIATDNYALVESAFLHLKEKGVNR 121 DFDD + +AL+D +P+V VGGSY A +YPP + YIATDN LV A+ HL G+ R Sbjct: 68 DFDDPAVCEALSDSLLPVVAVGGSYEDAAAYPPNLPYIATDNMQLVSLAYKHLIGAGLQR 127 Query: 122 FAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQTL 181 FA Y LPES RWA ERE AF L+ + G V++GL T+ W A +L +WLQ+L Sbjct: 128 FALYSLPESPTNRWAQERERAFNALLKADGLEGDVHRGLPTSAPVWHQASVQLTEWLQSL 187 Query: 182 PPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQ 241 P GIIAVTDARAR +LQ C IPVPE++ +IGIDN+ LTR L+R+ LSSV QG + Sbjct: 188 PKPVGIIAVTDARARQLLQACLISGIPVPEQVAIIGIDNDPLTRSLTRIPLSSVIQGTEE 247 Query: 242 MGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKG 301 MG AA LLH++L +RILVPPV + ST + L P V++A HYIR +AC+G Sbjct: 248 MGRTAAHLLHQMLGGARFAGRRILVPPVGINVCESTKHEPLASPYVMRARHYIRQYACQG 307 Query: 302 IKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCG 361 IK +QV D VG+SRS+LE F+ E+G T+H I KL+ A+ LL +S E++ CG Sbjct: 308 IKTEQVADYVGVSRSSLEDYFRRELGCTVHQEILKHKLDVAKQLLAQQDMSSAEVAIRCG 367 Query: 362 YPSLQYFYSVFKKAYDTTPKEYRDV 386 + SLQY Y+VF++ D TP+EY++ Sbjct: 368 FTSLQYMYAVFRRELDCTPREYQER 392 >UniRef50_A6CF05 Xylose operon regulatory protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CF05_9PLAN Length = 386 Score = 356 bits (915), Expect = 5e-97, Method: Composition-based stats. Identities = 113/392 (28%), Positives = 203/392 (51%), Gaps = 10/392 (2%) Query: 2 FTKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFI--EEDFRARIDKIKDWLGDG 59 ++ R+ +L + + + R ++ G+ + + W + + + ++ DG Sbjct: 1 MQEQSRVAILIDTSSGHGRGLLNGMIRFQR-EIGSWSVIFRSHQPDQPAPAWLQKADIDG 59 Query: 60 VIADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGV 119 V+A KQ+ L +P++ + + + TDN +VE A HL ++G+ Sbjct: 60 VLARIPHKQMADILRKRRLPVIDMPYTREGF----GFPSLFTDNQKIVELAAQHLLDRGI 115 Query: 120 NRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVY--QGLETAPENWQHAQNRLADW 177 F F G P R ER F Q +A+ ++ Q +W++ Q +A+W Sbjct: 116 RHFGFCGWPRGLNSRM-DERCDLFVQTLADAGCTCSLFPEQNDRWDASHWENDQQGIAEW 174 Query: 178 LQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQ 237 L TLP G++A D R +H+L+ C+ + + VP+++ VIG DN++L LS L+S+ Sbjct: 175 LITLPKPAGVMACYDDRGQHVLEACQIVGLKVPDEVAVIGSDNDDLICKLSSPPLTSIDA 234 Query: 238 GARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNH 297 G ++GY+AA LL +++ + E P L PP R+++R+ST+ ++ D + A+ +IR+H Sbjct: 235 GFERIGYEAASLLEQMMKQGEQPEPVQLFPPARLVQRQSTNIVAVEDQDLAAALRFIRDH 294 Query: 298 ACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEIS 357 A + I V+ +L V ISRS+LE+R K+ +G T I +LE+ + LL T LS+ EI+ Sbjct: 295 ASQRITVEDILAEVPISRSSLERRMKKFIGRTPKEEILRVQLERVQQLLAETQLSLTEIA 354 Query: 358 QMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSE 389 G+ Y ++FK+ + TP +R + Sbjct: 355 FKTGFDHPHYLAALFKRKFQQTPGSFRRAVRK 386 >UniRef50_A6CCU7 Xylose operon regulatory protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CCU7_9PLAN Length = 395 Score = 356 bits (913), Expect = 9e-97, Method: Composition-based stats. Identities = 109/385 (28%), Positives = 189/385 (49%), Gaps = 8/385 (2%) Query: 5 RHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEE-DFRARIDKIKDWLGDGVIAD 63 R R+ LL + + RQV+EGV EY AS WD IE F ++ W GDGVI Sbjct: 5 RWRVALLVQTSSEWSRQVLEGVAEYA-ASNGGWDFRIEPRGFYEKLRLPLTWEGDGVICR 63 Query: 64 FDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRFA 123 D ++ + L ++P V V + + + +D A A + + G F Sbjct: 64 LTDPELIEELHSRNIPAVNVSWKGLNSN---DIPNVISDEAACGRLAADYFIQNGWTNFG 120 Query: 124 FYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQ-GLETAPENWQHAQNRLADWLQTLP 182 F G P +++ + ++ QL+A Y ++ L +++ + + WL +LP Sbjct: 121 FVGPPP--NQKYTDVTQKSYSQLLAAGGYHTYQFEHSLGYGKLSFEDQRPEMEKWLLSLP 178 Query: 183 PQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQM 242 + T + I+ C HL + VP + ++ ++ + L LS V ++ + Q ++ Sbjct: 179 KPIALFVWTTTMGQEIMLFCRHLGLSVPNDVAILAVELDPLISSLSPVPIAYIDQSPHRV 238 Query: 243 GYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGI 302 G +AAKLL +++ E P + +L+PP ++ R+S D D V A+ +IR + Sbjct: 239 GMEAAKLLQKMIQGEPAPEKSVLIPPSGIVARQSVDTLLGEDEHVRNAIEFIRKKIALPM 298 Query: 303 KVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGY 362 +V+ V +AV +SR +LE RF++ +G++ MI KL +A +LL+ T L+I EI++ G+ Sbjct: 299 QVEDVANAVSLSRRSLENRFQKTLGKSPAQMIRESKLSRAMNLLMETNLTIQEIAERTGF 358 Query: 363 PSLQYFYSVFKKAYDTTPKEYRDVN 387 ++ F FK+ P YRD Sbjct: 359 FHVETFARFFKRETGKPPSLYRDKK 383 >UniRef50_A6C3C2 Xylose operon regulatory protein n=2 Tax=Planctomycetaceae RepID=A6C3C2_9PLAN Length = 405 Score = 356 bits (913), Expect = 1e-96, Method: Composition-based stats. Identities = 106/385 (27%), Positives = 204/385 (52%), Gaps = 12/385 (3%) Query: 6 HRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFR--ARIDKIKDWLGDGVIAD 63 + LL ++++ R ++ G+ +++ A + EW +F+ + I W GDG++ Sbjct: 27 PHVALLIETSRSHGRGLLNGIRQFI-AEKEEWSVFLMPRSLDSQVPEWISRWKGDGILCR 85 Query: 64 FDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRFA 123 +++ A+ +P + + + ++ DN A+ H E+G+ F Sbjct: 86 TTSQEMADAITKSGIPALELRSTKLKH----SFPFLGIDNRAMGRMVAEHFLERGIRHFG 141 Query: 124 FYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETA--PENWQHAQNRLADWLQTL 181 Y E + + +R + Q + Y V+ + + P W+ Q ++ W+ L Sbjct: 142 VY---EIGCEVYFEQRCENYIQTINNAGYEVSVFSSPDDSEVPREWEKHQEKMVKWVSGL 198 Query: 182 PPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQ 241 P G++A TD +L C+ I VP+++ V+G +N+++ ++R LSSVA + + Sbjct: 199 PKPAGVMACTDLLGFWLLDACDRAGISVPDEVAVVGAENDDILCMMARPPLSSVAYNSTR 258 Query: 242 MGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKG 301 +GY+AA LL R++ +P + L+ P+ ++ R+S+D ++ DP + A+ +IR +ACKG Sbjct: 259 IGYEAAALLSRIMKGGSVPEEPYLLKPLGIVTRQSSDVVAVDDPELALALRFIRENACKG 318 Query: 302 IKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCG 361 I+V +L AV +SR+ LE++ K +G + A I ++E+A+ LL ST LS+++I+Q G Sbjct: 319 IQVTDILKAVPMSRTALERQMKSAIGRSPKAEIIRTQIERAKELLASTDLSLSQITQRIG 378 Query: 362 YPSLQYFYSVFKKAYDTTPKEYRDV 386 + Q+F ++FK+ TP E+R Sbjct: 379 FRHTQHFSTLFKEKVGETPGEFRSQ 403 >UniRef50_C5BYV3 Transcriptional regulator, AraC family n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5BYV3_BEUC1 Length = 401 Score = 353 bits (907), Expect = 5e-96, Method: Composition-based stats. Identities = 115/388 (29%), Positives = 202/388 (52%), Gaps = 13/388 (3%) Query: 1 MFTKRHR-ITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARID--KIKDWLG 57 M +R R + LL + AY R ++ GV +Y+ A + W +++ E R D ++ W G Sbjct: 1 MPPRRTRHVALLVETSNAYARGLLAGVRKYV-AGDAGWSLYLAEHSRHETDFSWLEGWEG 59 Query: 58 DGVIADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEK 117 DGV+A ++ + + + +D+P V + AE + TD+ A+ A H E+ Sbjct: 60 DGVLARIENVETARFIRRLDLPTVDLSAGRLAAE----LPGAETDDRAIARLAVEHFTER 115 Query: 118 GVNRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADW 177 G+ FAF G W+ +R + V E +R + + RLA+W Sbjct: 116 GLRHFAFCG---DERFAWSIKRSTWYSHYVRELGHRPQTFAMKSSGMRAVDR--ERLAEW 170 Query: 178 LQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQ 237 L+ LP G++A D + +L+ C+ ++ VP+ + V+G+DN+EL L+ ALSS+ Sbjct: 171 LRGLPKPVGVLACYDIAGQEVLEGCKIANLAVPDAVAVLGVDNDELVGTLTSPALSSIEP 230 Query: 238 GARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNH 297 + GY AA++L ++ E+ L+ P+RV+ R+S+D S++DP V +A+ YIR+ Sbjct: 231 DTTRTGYLAAEMLDLMMGGRELDPGLRLIEPLRVVARQSSDIFSVSDPLVAEALRYIRDR 290 Query: 298 ACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEIS 357 + + + V++VL VG+SR +L+ RF + +G T+H I ++ LL ST ++ +I+ Sbjct: 291 SDQNLAVEEVLRHVGLSRRSLDHRFAQTLGRTVHGEIVRVRMGHVAELLSSTDWTLPQIA 350 Query: 358 QMCGYPSLQYFYSVFKKAYDTTPKEYRD 385 + + +Y FKK +P YR Sbjct: 351 ERLEFSHSEYMGVAFKKYTGKSPGRYRR 378 >UniRef50_C1ZFQ8 Transcriptional regulator n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZFQ8_PLALI Length = 409 Score = 353 bits (906), Expect = 8e-96, Method: Composition-based stats. Identities = 103/390 (26%), Positives = 188/390 (48%), Gaps = 9/390 (2%) Query: 1 MFTKRHR-ITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDF-RARIDKIKDWLGD 58 M HR + L+ + + + RQV+ G+ +Y + WD FIE ++ K W GD Sbjct: 26 MPPTMHRSVALIVHTSSDWTRQVLRGIAQYA-SEHGFWDFFIEPRGHDEKLLIPKGWSGD 84 Query: 59 GVIADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKG 118 G+IA +E+ + ++P V V + + + +D A A H E+ Sbjct: 85 GIIARLTHPALEKQILKSNLPCVNVSWM---GQHSLRIPKVVSDEAACGRLAAEHFLEQS 141 Query: 119 VNRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAP-ENWQHAQNRLADW 177 FA+ G +G + + + + ++ +YQ P + + W Sbjct: 142 FRSFAYIGPIHRAG--YDDLLGKNYINTLLQAGHQTSIYQPTVPIPVPDLLTQRKGFLQW 199 Query: 178 LQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQ 237 L+ LP T I + R ++ +P+ + ++ +N+ L L+ V LS++ Q Sbjct: 200 LKMLPKPTAIFTWSGEVGRELMTCARLSRFRIPDDIALLVGENDPLLSALAPVPLSNIDQ 259 Query: 238 GARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNH 297 ++GY+AA LL +L++ E P + ILVPPV V++RRST+ ++ DP V A+ ++R+H Sbjct: 260 APVRVGYEAATLLDKLMNGEPAPEEPILVPPVGVVQRRSTETSAVDDPLVDMAVRFMRDH 319 Query: 298 ACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEIS 357 + I++ V A+ +SR LE RF + + +T ++ +L+ + LL TTL + I+ Sbjct: 320 LSEPIQIADVEKALNVSRRVLEHRFHKVLDDTPANVLRRMRLQNVKRLLGETTLPLARIA 379 Query: 358 QMCGYPSLQYFYSVFKKAYDTTPKEYRDVN 387 Q+ G+ ++ F++ TP EYR + Sbjct: 380 QLTGFNHVEVLVRTFRRELGVTPGEYRRRH 409 >UniRef50_A6C615 Xylose operon regulatory protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C615_9PLAN Length = 384 Score = 350 bits (898), Expect = 6e-95, Method: Composition-based stats. Identities = 119/387 (30%), Positives = 208/387 (53%), Gaps = 12/387 (3%) Query: 4 KRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDF--RARIDKIKDWLGDGVI 61 ++ + +K + R++++G+ Y + + W I+I+E + IK W GDG+I Sbjct: 5 STPQVAIFIETSKTFGREILQGISTYSR-THGPWSIYIDEWGPQTPLPEWIKTWQGDGII 63 Query: 62 ADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNR 121 A +Q+ + LA + VP+V + + D+ + + AF HL ++ + + Sbjct: 64 ARVRSRQMAERLARLRVPVVD----TLQQVPELEMPAVFADDTLIAKLAFEHLHDRHLRQ 119 Query: 122 FAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAP--ENWQHAQNRLADWLQ 179 FAF G+ ++ W+ R AF ++ E+ + +Y L E+W Q+ LADWL+ Sbjct: 120 FAFVGVEKA---NWSHRRRDAFAEIACEQGFTCEIYSPLSRRRFAESWNGGQDDLADWLE 176 Query: 180 TLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGA 239 LP G+ A D RA +L C I +PE++ V+G+DN+++ + L+S+A A Sbjct: 177 ALPKPIGLFAAHDLRALCVLDACRRRDIAIPEQVAVVGVDNDDVFCEVVDPTLTSIALQA 236 Query: 240 RQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHAC 299 +++GYQ+A LL +L+ + VPP +I RRST+ ++ DPA+ A+ IR AC Sbjct: 237 KEIGYQSAALLDQLMRGNPPAQYPLPVPPRILIPRRSTNMIAVEDPAIASALELIRRKAC 296 Query: 300 KGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQM 359 + I V + V ++R +LE+R + VG+T H +I E++ +AR LLI T ++ +I+QM Sbjct: 297 EKISVSMIASQVNLTRRSLERRLMKLVGKTPHQLISEERVRRARQLLIDTDFTLEQIAQM 356 Query: 360 CGYPSLQYFYSVFKKAYDTTPKEYRDV 386 G+ S Y + K+ + TP E+R Sbjct: 357 AGFSSAAYLSVIIKEHENCTPTEFRQK 383 >UniRef50_A3ZQ62 Xylose operon regulatory protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZQ62_9PLAN Length = 391 Score = 347 bits (891), Expect = 4e-94, Method: Composition-based stats. Identities = 108/390 (27%), Positives = 188/390 (48%), Gaps = 15/390 (3%) Query: 2 FTKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRAR-IDKIKDWLGDGV 60 + + LL +++ Y R + GV +Y + ++ + +E + I+ W DGV Sbjct: 6 PPRSQVVLLLIESSRGYGRACLHGVADYCRIHRNWQILHVERRLNEALPEAIQHWNIDGV 65 Query: 61 IADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVN 120 I + + + + + P V + GSY TD+ A E A H E+G+ Sbjct: 66 ITRIETDDVMETIDRLGRPTVDLRGSYFPQRG----ATFDTDHAACAEMAVEHFVERGLR 121 Query: 121 RFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPEN------WQHAQNRL 174 A+ G P G ++ R F ++ + R + G + + + N L Sbjct: 122 DIAYCGYP---GIDFSDLRAAPFERIARQHGCRTHSFVGSQVDRDAMVRELLGESETNEL 178 Query: 175 ADWLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSS 234 W+Q+LP GI+ D RAR +L C+ + VPE + ++GIDN+ L LSS Sbjct: 179 GKWVQSLPRPCGILGCNDVRARQVLMSCKLAGVAVPEDIALLGIDNDLTICNLVTPLLSS 238 Query: 235 VAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYI 294 + A ++GY+ A L RL+ E++ + +L+PP ++ R S+D ++ D V +HYI Sbjct: 239 IEPDAHRIGYEGAASLDRLMKGEQVE-KHVLIPPKSIVVRGSSDVMAIADREVAAIVHYI 297 Query: 295 RNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSIN 354 HAC G+ V+ + + +SRS+L++RF++E+G I + I +++ A++LL T L + Sbjct: 298 SEHACSGLSVEMIANQFHLSRSSLDRRFQQELGRGIKSEIDRVRIDHAKALLRYTDLKLI 357 Query: 355 EISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 I+ Y S S FK+ TP +R Sbjct: 358 AIAHHTSYSSAAKLVSAFKRITGVTPGAFR 387 >UniRef50_C0A9R7 Xylose operon regulatory protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A9R7_9BACT Length = 403 Score = 346 bits (888), Expect = 8e-94, Method: Composition-based stats. Identities = 110/407 (27%), Positives = 183/407 (44%), Gaps = 23/407 (5%) Query: 2 FTKRHR-----ITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRA-RIDKIKDW 55 R + LL + + R ++ G+ Y S W++ +E A + W Sbjct: 1 MKNSRRQTDLDVALLIDTACQWTRHIILGINRYKSMLASPWNLLVEPHGSADPLALPHGW 60 Query: 56 LGDGVIADFDDKQIEQALADVDVPIVGVGGS-------YHLAESYPPVHYIATDNYALVE 108 GDGVIAD ++ L VP+V V S + + D A E Sbjct: 61 QGDGVIADIRFPKMAAQLRKYGVPVVNVSDSTVATATKRGGGAAMQGFPQVCIDRKAACE 120 Query: 109 SAFLHLKEKGVNRFAFYGLPESSGKRWATEREYAFRQLVAEEKY-RGVVYQGLE--TAPE 165 A H E+G FA+ + +G W E F + Y+ Sbjct: 121 LAVEHFTERGFTHFAYI---DLAGNEWDRETHRYFTGALRAAGIKECASYEAQNRAWGAP 177 Query: 166 NWQHAQNRLADWLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTR 225 +W + L WL++LP + + + R ++ C + + VPE++ ++ + +E+ Sbjct: 178 DWSIDIDALGAWLRSLPKPVAVFSWS--VGREVIHACRRVGLKVPEEVALLLLAYDEIFS 235 Query: 226 YLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMP--LQRILVPPVRVIERRSTDYRSLT 283 + V +S + ++GYQAA+ L RLL + +P R LVPPV V R+STD ++T Sbjct: 236 EVGYVPISGIVHAWEEIGYQAAERLGRLLAGKRIPAREWRTLVPPVGVRTRQSTDTLAIT 295 Query: 284 DPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKAR 343 +P + A+ YIR +A + + VD+V + G+SR LE+ F +G T I ++E+A+ Sbjct: 296 NPVITSALGYIRENAGRPLLVDEVAEHAGVSRRKLERHFLHVMGRTPADQIRHVQVERAK 355 Query: 344 SLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSEV 390 LL T I E+++ G+ S +Y +VF+K TP +YR V Sbjct: 356 VLLAETNRPIPEVAEAAGFGSPEYMATVFQKKLGLTPLKYRKKRHAV 402 >UniRef50_B5JFL8 Transcriptional regulator, AraC family protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JFL8_9BACT Length = 385 Score = 346 bits (887), Expect = 1e-93, Method: Composition-based stats. Identities = 105/390 (26%), Positives = 199/390 (51%), Gaps = 13/390 (3%) Query: 4 KRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRAR--IDKIKDWLGDGVI 61 RI +L + RQ+V G+ + + +++W IF I++W GDG+I Sbjct: 2 PSKRIAILVETSLDSGRQIVRGISRFAR-ERNDWSIFYHTGPLGAMAPASIENWEGDGII 60 Query: 62 ADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNR 121 A + ++ + P V V G+ A+ + D+ A+ HLK++G Sbjct: 61 ARIANPKLHSLVKTRQTPAVDVLGNVPEADY----PIVKCDDRAISALVGNHLKDRGFRH 116 Query: 122 FAFYGLPESSGKRWATEREYAFRQLVAEE---KYRGVVYQGLETAPENWQHAQNRLADWL 178 AF+GL + + W+ R+ ++ E K + +E ++W R+ W+ Sbjct: 117 IAFFGL---NNEIWSVNRKIELQRFCDRELGSKLDTLEVDHIERDSQSWPDYTARIRTWI 173 Query: 179 QTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQG 238 + LP GI+ +D +L C+ + VP+++ ++G+DN+ + + LSSV Sbjct: 174 EALPKPVGIMVASDQFGPDLLGACQASGLSVPDQVALVGVDNDLPFCEICQPQLSSVEPN 233 Query: 239 ARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHA 298 +GY+AA++L +L+ P + +PP + R+S+D +L DP++++A+ YIR HA Sbjct: 234 HELVGYEAARILDTILETGSAPQSIVEIPPRLLHVRQSSDATALEDPSLVKALRYIRAHA 293 Query: 299 CKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQ 358 C + VD + G+SRS L++RF+ + +T+ I A ++ +A+ +L +T L++ ++++ Sbjct: 294 CDPVSVDDIAREAGVSRSVLQRRFRNSLNQTVLEAILAVRINRAKEMLATTRLALPDVAE 353 Query: 359 MCGYPSLQYFYSVFKKAYDTTPKEYRDVNS 388 CG+ +Y VFKK TP +YR ++ Sbjct: 354 RCGFRHQEYLGYVFKKRIGCTPGQYRTKHT 383 >UniRef50_Q7UHK5 Xylose operon regulatory protein n=2 Tax=Planctomycetaceae RepID=Q7UHK5_RHOBA Length = 416 Score = 345 bits (885), Expect = 2e-93, Method: Composition-based stats. Identities = 108/390 (27%), Positives = 190/390 (48%), Gaps = 9/390 (2%) Query: 2 FTKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFI-EEDFRARIDKIKDWLGDGV 60 + + +L + ++ R VVE + + S+W + I D + R+ K W GDG+ Sbjct: 35 TPRPRHVGILVETDDSWGRNVVEAICRF--GHSSDWTVLISPRDSQGRLRLPKVWNGDGI 92 Query: 61 IADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVN 120 IA + + +++P+V VG + + +ATD+ A + AF HL+E+G+ Sbjct: 93 IASLRTASSVRHVKSLNLPVVDVGIMIPKCDWF---ARVATDDAARAKMAFEHLRERGLT 149 Query: 121 RFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQT 180 FA Y P R++ R AF V E Y +Y+ W + + WL T Sbjct: 150 HFACYAPPIG---RYSDVRSAAFVHAVTEGGYECAMYEAPHDDSAGWLTNYSNVRRWLST 206 Query: 181 LPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGAR 240 LP GI A AR ++++C I +P++L V+ D++EL ++ +S+V + Sbjct: 207 LPRPLGIFAADPYPARQLVEICSADSIRIPDELSVLSGDDDELLCNVATPQISAVELASH 266 Query: 241 QMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACK 300 Q+G A+++L +++ P + L+PP++V R STD ++ D + + + YIR+ A Sbjct: 267 QIGETASRMLAKMMSGSATPKRERLIPPLQVRGRHSTDILAIPDNEIAEILRYIRDKARD 326 Query: 301 GIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMC 360 GI V +L+ ISR LE+RF+ E+ + I ++ LL+ + I+ I+ Sbjct: 327 GITVTDLLNEFPISRRRLEQRFRAELNRSPAEEIRRVRMSHVARLLLDSDKPISTIAYES 386 Query: 361 GYPSLQYFYSVFKKAYDTTPKEYRDVNSEV 390 G+ + F++ + TTP EYR N Sbjct: 387 GFATGASLSQAFRQHFGTTPGEYRRQNHAT 416 >UniRef50_Q64VG9 Transcriptional regulator n=8 Tax=Bacteroidales RepID=Q64VG9_BACFR Length = 391 Score = 344 bits (884), Expect = 2e-93, Method: Composition-based stats. Identities = 102/390 (26%), Positives = 186/390 (47%), Gaps = 16/390 (4%) Query: 7 RITLLFNANKAYDRQVVEGVGEYLQASQSEWDIF-------IEEDFRARIDKIKDWLGDG 59 R+ LL + +++ +++GV Y + W + + + K W D Sbjct: 3 RLILLTDFTESFSYNLLKGVLAYSKK-HEPWVVCRMPPSYKLTYGIEGVLKWAKAWQADA 61 Query: 60 VIADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGV 119 +I FD+ + + + + + I D + A KG Sbjct: 62 IIGRFDNDDNVELFRKNGIIAIAQDYKSRFS----NIPNITGDYHKTGRMAAEFFLSKGF 117 Query: 120 NRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPEN-WQHAQNRLADWL 178 FAFYG ++ W+ ER F + +AE + Y E + ++ W + L WL Sbjct: 118 RNFAFYGYRDTV---WSQERCEGFYECIAEHGFGNNFYSYQEQSLDDLWFYEAPPLLTWL 174 Query: 179 QTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQG 238 ++LP T ++A D + I ++C+ +I VP+K+ ++G+DN+E+ LS LSS++Q Sbjct: 175 KSLPQPTALMACDDNQGNRITEICKVNNIRVPDKIAILGVDNDEIICNLSDPPLSSISQN 234 Query: 239 ARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHA 298 + G++AA+L+ LL+ EE Q +++ PV ++ R STD+ S T+ + A+ YI + Sbjct: 235 IVRGGFEAAELIEHLLNDEECSYQDVVLQPVNIVNRLSTDFYSTTNTHIHTALKYIHRNL 294 Query: 299 CKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQ 358 I V ++ V +SR LE RFKE ++IH I ++E+ LL+++ I ++++ Sbjct: 295 ANDITVSDIVKQVPLSRRLLEIRFKEVTKQSIHKYILNLRIERFAQLLLASDAPIADVAE 354 Query: 359 MCGYPSLQYFYSVFKKAYDTTPKEYRDVNS 388 G +L+ FK + +P EYR + Sbjct: 355 QVGINNLKNLSRQFKTLKNVSPYEYRKEHQ 384 >UniRef50_Q7UHJ2 Xylose operon regulatory protein n=1 Tax=Rhodopirellula baltica RepID=Q7UHJ2_RHOBA Length = 403 Score = 344 bits (884), Expect = 3e-93, Method: Composition-based stats. Identities = 105/390 (26%), Positives = 196/390 (50%), Gaps = 17/390 (4%) Query: 8 ITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDF--RARIDKIKDWLGDGVIADFD 65 + LL +++AY R ++ G+ Y Q Q +W + +E + W GDGV+ + Sbjct: 11 VALLIESSRAYGRGLLRGIAAYAQD-QGDWSLRHQEMTINADPPSWLSRWQGDGVLVRAE 69 Query: 66 DKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRFAFY 125 ++ +A+ D+ +P++ + S + TD ++V A HL+++G +F F Sbjct: 70 TPKMIRAIQDLGLPVIDL----RCWRSAGKIPGFDTDPASVVRLAVDHLRDRGYTQFGFC 125 Query: 126 GLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQN-------RLADWL 178 G G ++ R R+ V + V Y+ A+ L WL Sbjct: 126 GF---GGANYSDRRLTEMRKYVRSLGHDVVAYESPGPVHATTFDAEQSGMLDEVGLGRWL 182 Query: 179 QTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQG 238 ++L G++A D RA+ +L C +I VP+++ V+G+DN+++ L L+SV Sbjct: 183 KSLAKPVGVLACNDIRAQQLLNACHECNIHVPDEIAVVGVDNDDVICPLCSPPLTSVEPN 242 Query: 239 ARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHA 298 +++GY+AA +L R++ E +P + VP R++ R STD + D I+A +IR +A Sbjct: 243 TQKIGYEAAAMLDRMMSGEIVPAELTWVPARRIVVRGSTDSIPVDDAEFIKAYRFIRENA 302 Query: 299 CKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQ 358 C+G+ V V DAV +SR +LE+R + + ++ +I + +L + + LL +T+ + +I++ Sbjct: 303 CRGVSVQDVADAVPMSRRSLERRMRTYLDQSPSDLIASIRLARIKELLETTSQPLKKIAR 362 Query: 359 MCGYPSLQYFYSVFKKAYDTTPKEYRDVNS 388 + G+ ++ FKK P YR + Sbjct: 363 LTGFNYDEHMAKFFKKLTGVPPGHYRRKHR 392 >UniRef50_D2QUQ8 Transcriptional regulator, AraC family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QUQ8_9SPHI Length = 387 Score = 341 bits (876), Expect = 2e-92, Method: Composition-based stats. Identities = 105/391 (26%), Positives = 182/391 (46%), Gaps = 16/391 (4%) Query: 5 RHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFI-------EEDFRARIDKIKDWLG 57 H+I LL + ++ Y + +++G+ +Y + W +D ++W Sbjct: 1 MHKIILLIDFSEEYSKSLLKGITKYSR-EHGPWVFCRMPLFHRETMGIDGILDWAREWEA 59 Query: 58 DGVIADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEK 117 DG++ + + + +P++ E + + I + +K Sbjct: 60 DGIVGQLYNDVSVEKIVQAGIPVIA----QDFKERFTDIPNITGAYRETGAMGAEYFLKK 115 Query: 118 GVNRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLE-TAPENWQHAQNRLAD 176 G FAFYG S W+ ER F + V Y+ ++ + + E W + + L++ Sbjct: 116 GFQHFAFYGF---SNIVWSRERAEGFEERVTRAGYQVTYFEHEKARSSELWYYKPSSLSE 172 Query: 177 WLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVA 236 WL +LP I+ D +HI + C H I +PE++ V+G+DN+E+ LS LSS+ Sbjct: 173 WLASLPKPIAIMTCDDRLGQHITEACRHSGIRIPEEVAVLGVDNDEMFCELSDPPLSSIT 232 Query: 237 QGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRN 296 A + GY AA LL RL+ KE I+V P +VI R+STD + D + ++ YI Sbjct: 233 LDAEKGGYDAAHLLDRLIRKEITQGYDIVVEPTQVITRQSTDIYATPDEYIAVSLKYIHQ 292 Query: 297 HACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEI 356 + K ++VD V+ V +SR +LE RF++ +G I+ I ++EK L+ T ++ EI Sbjct: 293 NIDKNLQVDDVVKQVPLSRRSLEMRFQQVIGYPIYKYIQNLRIEKFSKKLLETDQAVFEI 352 Query: 357 SQMCGYPSLQYFYSVFKKAYDTTPKEYRDVN 387 + G + FK+ TP +YR Sbjct: 353 AMDLGLNDTRNIARQFKQIKGCTPLKYRHRY 383 >UniRef50_B5JIB2 Transcriptional regulator, AraC family protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JIB2_9BACT Length = 394 Score = 341 bits (874), Expect = 3e-92, Method: Composition-based stats. Identities = 106/396 (26%), Positives = 191/396 (48%), Gaps = 14/396 (3%) Query: 2 FTKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRAR--IDKIKDWLGDG 59 +R R+ L+ + ++ + ++ + ++W +F+++ R D + D DG Sbjct: 1 MIERPRVALVLRGWLEENLNILHSLAKFKR-FNAKWHVFVDDQARGADNPDWLLDQGWDG 59 Query: 60 VIADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGV 119 +I ++ + + + V + +L E P + +N A+ + H EKG Sbjct: 60 IICKERSGELFRKARERGIACVDMSDDGNLREGCPKMR---PNNLAIGHTGAEHFIEKGF 116 Query: 120 NRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETA---PENWQHAQNRLAD 176 FA+ G + W+ ER + + + + V++ P ++ +A Sbjct: 117 RHFAYCGF---GNELWSRERGEGYIEALTLAGKKCAVFESDYPGVSVPAWEFAEEDEMAK 173 Query: 177 WLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVA 236 W+ TLP I+A D RA HI+ C VPE++ ++GI+N+ L +LSS+ Sbjct: 174 WIDTLPKPVAILACNDLRAMHIVNACHQGEFRVPEEVAILGINNDSARCELCSPSLSSIP 233 Query: 237 QGARQMGYQAAKLLHRLLDKEEMPL--QRILVPPVRVIERRSTDYRSLTDPAVIQAMHYI 294 + A + L L+ + + + P+ V+ RRST ++ DPAV QA++ I Sbjct: 234 VDVTEYARVAGETLEALMKGADPADFKEVTYIDPLEVVTRRSTSILAVEDPAVAQALNLI 293 Query: 295 RNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSIN 354 R +ACKGI V+QV +V ISRS LEKRF++ VG + I ++ + + +L T LS+ Sbjct: 294 RENACKGITVEQVAKSVHISRSLLEKRFRQYVGRSPQVEIRHAQVMRIKQMLTETELSLA 353 Query: 355 EISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSEV 390 E++++ G+ +Y VFK+ TTP YR + E+ Sbjct: 354 EVAEITGFEHPEYMSVVFKRLTHTTPSAYRKKSKEL 389 >UniRef50_A6CDQ7 Xylose operon regulatory protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CDQ7_9PLAN Length = 388 Score = 339 bits (871), Expect = 7e-92, Method: Composition-based stats. Identities = 107/390 (27%), Positives = 192/390 (49%), Gaps = 8/390 (2%) Query: 2 FTKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIE-EDFRARIDKIKDWLGDGV 60 F +R +I LL + + RQ+++G+ +Y Q WD +IE + ++ W G G Sbjct: 3 FPERRKIALLVQTSSDWSRQIIQGIADYA-LEQGGWDFWIEFRGLQEQLRLPASWNGHGT 61 Query: 61 IADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVN 120 + D +I+Q++ +P V V L + + + +D A A KG Sbjct: 62 VCRLTDARIQQSILRRKLPAVNVSW---LGKHSAKIPKVVSDERACARLAADFFLRKGFR 118 Query: 121 RFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPEN-WQHAQNRLADWLQ 179 + G + + E E F++ + + + + E E+ +Q Q RL +WL Sbjct: 119 SCGYIGPDPTLKYQPIIENE--FQKRIVQGEGVCYQFPYYELTKEDDYQKQQKRLKEWLW 176 Query: 180 TLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGA 239 LP ++ + R + VC + H+ +P+++ ++ I+++ L LS V LS + Q Sbjct: 177 ELPKPVALLVWSSKVGREVATVCVNHHLEIPDQVAILSIEHDPLMSALSPVPLSCINQSP 236 Query: 240 RQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHAC 299 +GY+AA+LL +L+ P + IL+PP+ + ER STD D V +A+ +IR HA Sbjct: 237 HVVGYEAAQLLDQLIQGAPPPAEPILIPPLLIEERASTDTLFADDGLVREAIQFIRQHAQ 296 Query: 300 KGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQM 359 + ++V + D + +SR LE RF++ + + A I EKL++ LL T L+I++I+ Sbjct: 297 EPLQVSDLTDHLNVSRRILEHRFQKALHRSPAAEIRQEKLKRIIKLLQETKLTISQIAAR 356 Query: 360 CGYPSLQYFYSVFKKAYDTTPKEYRDVNSE 389 CG+ + +F + +P+EYR N Sbjct: 357 CGFQHQEAMIRMFGRVTGMSPREYRQQNHS 386 >UniRef50_D2R7D2 Transcriptional regulator, AraC family n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R7D2_9PLAN Length = 390 Score = 338 bits (867), Expect = 2e-91, Method: Composition-based stats. Identities = 119/389 (30%), Positives = 193/389 (49%), Gaps = 16/389 (4%) Query: 3 TKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRAR--IDKIKDWLGDGV 60 T R ++ L+ + Y R +++GV Y++++ EW +F+E+ I W GDG+ Sbjct: 9 TSRPQVALIIETSINYGRGLLKGVARYMRSA-GEWSVFLEQRELGAELPRWIDRWDGDGI 67 Query: 61 IADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVN 120 I DD ++ + +P V + + V I DN A+ A HL E+G Sbjct: 68 ITRSDDPRLLE----RGIPTVALFDHRSCQQ---KVPQILNDNRAVGRLAAAHLVERGFR 120 Query: 121 RFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPE---NWQHAQNRLADW 177 AFYG+P G+ W+ ER R+ A + V++ + + WQ +Q LA W Sbjct: 121 HLAFYGVP---GEFWSEERLAGVREEGARQGASLAVFEPARSRRKRSIAWQDSQEELARW 177 Query: 178 LQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQ 237 + G++A D L C+ I VPE++ V+G DN+E LS LSS+A Sbjct: 178 MSAQAAPLGLVAANDIHGLRALDACKRAGISVPERVAVMGADNDEELCELSDPPLSSIAF 237 Query: 238 GARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNH 297 + G+ AA++L R++ E + LVPP+ ++ R+STD ++ D V +A+ IR Sbjct: 238 QPLRAGFAAAEMLARMMRGERVQSAMQLVPPLGLVTRQSTDVLAMEDEEVARALAVIRQQ 297 Query: 298 ACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEIS 357 AC G+ V +L V ISR +LE R ++ +G T I ++E+A+ LL T L ++ I+ Sbjct: 298 ACDGLDVPAILRQVPISRRSLEIRMQKLLGRTPREEIRRVQIERAKKLLSETDLKLDRIA 357 Query: 358 QMCGYPSLQYFYSVFKKAYDTTPKEYRDV 386 CG+ F++ TTP +YR Sbjct: 358 VSCGFVRASALSIAFREVVGTTPSDYRSQ 386 >UniRef50_Q7UXA9 Xylose operon regulatory protein n=1 Tax=Rhodopirellula baltica RepID=Q7UXA9_RHOBA Length = 438 Score = 337 bits (865), Expect = 4e-91, Method: Composition-based stats. Identities = 124/395 (31%), Positives = 197/395 (49%), Gaps = 18/395 (4%) Query: 4 KRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRAR--IDKIKDWLGDGVI 61 R RI LL ++AY R+++ G+ Y + ++ +W + EE D I DGVI Sbjct: 38 NRPRIALLVEVSRAYGRELLRGIALYAR-TKGDWSLLHEEMTIDSVVPDWISRTRVDGVI 96 Query: 62 ADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNR 121 A D I+ L + VPIV V G+ +P V + DN + E AF HL E+G R Sbjct: 97 ARLDHHSID-PLRRLRVPIVDVRGNRK----FPGVPQVEADNEQVAEMAFEHLWERGFRR 151 Query: 122 FAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGL-------ETAPENWQHAQNRL 174 FAF G ++ ++ R AFR+LV + +Q Q L Sbjct: 152 FAFCGFRFAT---YSDARLIAFRKLVEKAGCPFTEHQSPGAPGITLRELERAGVVEQEAL 208 Query: 175 ADWLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSS 234 +WL TL TG+ D R + +L C +I VP+ + VIG+D+++ + +LSS Sbjct: 209 VEWLSTLERPTGLFVCNDIRGQQVLNACRFANIAVPDDVGVIGVDDDDTICSICDPSLSS 268 Query: 235 VAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYI 294 V A GY+AA++L ++L+ + +PP+ V ER ST ++ D + + +I Sbjct: 269 VRPNAELAGYRAAEILQQMLNGWVPDKEVERIPPISVTERLSTKVVAVEDAELARVCRFI 328 Query: 295 RNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSIN 354 R +AC GI V V++ +SR LE+RF++ +G T H I +LE+ R LL T +++ Sbjct: 329 RQNACNGINVGDVVEFTSLSRRQLERRFRDVLGHTPHHQITMTQLERVRQLLTETDMTLE 388 Query: 355 EISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSE 389 +I+ + GY + +VFK+ +P EYR + Sbjct: 389 QIAPLAGYSHKESLGAVFKRETGQSPGEYRTEQQK 423 >UniRef50_C1ZL78 Transcriptional regulator n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZL78_PLALI Length = 380 Score = 334 bits (856), Expect = 4e-90, Method: Composition-based stats. Identities = 106/385 (27%), Positives = 185/385 (48%), Gaps = 9/385 (2%) Query: 1 MFTKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFI-EEDFRARIDKIKDWLGDG 59 M + +L ++ R VVE V Y Q S+ W + I D R+ W GDG Sbjct: 1 MPNYSRSVAVLIETGDSWGRNVVEAVARYAQKSR--WALVISPRDEDGRLRLPHRWQGDG 58 Query: 60 VIADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGV 119 +A D + ++L +P+V V L V + TD+ + AF H + K Sbjct: 59 AVAMLRDVPMARSLQTAAIPVVDVDV---LMRQETWVGRVVTDDRVRIAMAFEHFRSKNF 115 Query: 120 NRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQ 179 FA + R+ +R F+Q+ + + + LE W +A W++ Sbjct: 116 THFACFAPHV---NRYPDQRSQLFQQVARKAGFYCCGFDKLERNELGWYADPQLVAQWIR 172 Query: 180 TLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGA 239 + P + A AR + ++C+ I +P+++ ++ D ++L ++ +SSV Sbjct: 173 SQPSPLAVFAPDPVPARQLAEICQWEGIHIPDEVAILSGDTDDLLCSIASPPISSVELDC 232 Query: 240 RQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHAC 299 ++G++A LLHR+++ P L+PP+RVI R ST+ ++ D + + +IR+HAC Sbjct: 233 ARIGHEACALLHRMMNGRPAPKHPKLIPPLRVIARHSTEILAVADQEIGDVLRFIRSHAC 292 Query: 300 KGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQM 359 +GI+V +L ISR LE++F+ +G T I +LE+AR+LL+ + L I+ ++ Sbjct: 293 EGIRVPDILKVYPISRRTLEQKFQTILGRTPSEEIRRTRLEQARNLLVDSDLPISSVATK 352 Query: 360 CGYPSLQYFYSVFKKAYDTTPKEYR 384 CG+ S F F+K P + R Sbjct: 353 CGFSSSVEFSHAFRKYLGIKPSDLR 377 >UniRef50_D1W5K7 Transcriptional regulator, AraC family n=1 Tax=Prevotella buccalis ATCC 35310 RepID=D1W5K7_9BACT Length = 387 Score = 334 bits (856), Expect = 5e-90, Method: Composition-based stats. Identities = 108/389 (27%), Positives = 176/389 (45%), Gaps = 15/389 (3%) Query: 7 RITLLFNANKAYDRQVVEGVGEYLQASQSEWDIF-------IEEDFRARIDKIKDWLGDG 59 R+ LL + + Y +++ G+ +Y Q S W I +E + + W D Sbjct: 3 RLILLIDFTETYATELLRGILDYSQ-SHEPWVICRMPPSYRVEHGIEGVLQWARQWKADA 61 Query: 60 VIADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGV 119 +I F+ A+ + + + + + + I D A +KG Sbjct: 62 IIGQFNSNDDVSVFAEYGI----IALAQDFIQRFQNIPNITGDYIGQGNLAAEFFIKKGF 117 Query: 120 NRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQ 179 FAFYG + W+ ER F + Y ++ W + L +WL Sbjct: 118 RNFAFYGY---ANAVWSQERCKGFSDTIKSFGYHSPSIYIKQSLEYLWYYDLEPLVEWLS 174 Query: 180 TLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGA 239 LP T I+A D RA IL+VC L I VP ++ V+G+DN+E+T L+ LSS++ Sbjct: 175 KLPSSTAILACDDTRASVILEVCRLLRIKVPSEIAVLGVDNDEITCTLTHPLLSSISLDV 234 Query: 240 RQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHAC 299 R+ GY +A+ + +L+ + I+V + V+ERRSTD ++ ++ + +I Sbjct: 235 RRAGYNSAQYIDHVLNHNYKRVDNIMVDYMGVVERRSTDIFMTSNKHILTVLSFIHQFYA 294 Query: 300 KGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQM 359 + VD++L V +SR LEK FK E G +IH I + E + L+ST I E++ Sbjct: 295 DNLSVDRLLKLVPMSRRLLEKTFKAETGTSIHQYILDLRFEHMKHKLVSTDTPIAELALS 354 Query: 360 CGYPSLQYFYSVFKKAYDTTPKEYRDVNS 388 G + +FKK TP EYRD + Sbjct: 355 TGLSDAKNVARMFKKRMGITPLEYRDKHR 383 >UniRef50_C6W1V7 Transcriptional regulator, AraC family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W1V7_DYAFD Length = 386 Score = 331 bits (848), Expect = 3e-89, Method: Composition-based stats. Identities = 100/391 (25%), Positives = 183/391 (46%), Gaps = 17/391 (4%) Query: 5 RHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEE-------DFRARIDKIKDWLG 57 ++I LL + + Y + +++G+ Y W + +W Sbjct: 1 MYKIILLLDFAEEYSKSLMKGINAYS-KEFGPWIFCRMPLFHRETIGIDGILKWALEWGA 59 Query: 58 DGVIADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEK 117 DG++ +K+I++ L +P++ E + + I + + + +K Sbjct: 60 DGIVGQLYNKEIDKILRA-GIPVIA----QDFKERFTEIPNITGAYHEAGQMGADYFLKK 114 Query: 118 GVNRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPEN-WQHAQNRLAD 176 G FAFYG + W+ ER F + + ++ ++ ++ ++ W + + L+ Sbjct: 115 GFTNFAFYGFND---IVWSRERAEGFEEHLRKKGHKVHYFEHKKSRSTELWYYKPSSLSR 171 Query: 177 WLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVA 236 WL++LP G++ D + +HI + C H+ I +PE++ V+G+DN+E+ LS LSS+A Sbjct: 172 WLKSLPKPIGLMTCDDNQGQHITEACRHVGIRIPEEVAVLGVDNDEMICDLSDPPLSSIA 231 Query: 237 QGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRN 296 + GY AAKLL ++ ++V P +VI R STD + D + ++ YI Sbjct: 232 LDVEKGGYDAAKLLDHMIRHGTAGFYDVVVRPTQVITRHSTDIYATNDDHIASSLKYIHQ 291 Query: 297 HACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEI 356 + K + VD+V+ V +SR LEKRF E G I+ I ++EK L+ T +S+ EI Sbjct: 292 NIEKNLHVDEVVKQVPLSRRALEKRFLEITGYPIYKYIFNLRIEKFTQKLLDTDMSVFEI 351 Query: 357 SQMCGYPSLQYFYSVFKKAYDTTPKEYRDVN 387 + G + F++A +P YR Sbjct: 352 ALDMGLGDSKNIARQFRQAKGCSPSAYRSKY 382 >UniRef50_B1ZWW6 Transcriptional regulator, AraC family n=4 Tax=Opitutus terrae PB90-1 RepID=B1ZWW6_OPITP Length = 445 Score = 330 bits (847), Expect = 4e-89, Method: Composition-based stats. Identities = 110/391 (28%), Positives = 195/391 (49%), Gaps = 13/391 (3%) Query: 3 TKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRAR--IDKIKDWLGDGV 60 + + L+F ++ GV Y +AS S W +++++ RA ++ GV Sbjct: 57 ESKPHVLLVFKTRYEDAAGMLRGVTHYERASNS-WVAYLDDEGRAEIDPRWVRSKRWCGV 115 Query: 61 IADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVN 120 I+ + + +++ +P+V + A P V I DN AL + + E+G Sbjct: 116 ISRHTTPTLARTCSELGIPLVDLSD----APPMPHVSKIRADNAALGQMGAEYFLERGYR 171 Query: 121 RFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQ---GLETAPENWQHAQNRLADW 177 FAF G + W+ ER F + + + +++ + AP + L W Sbjct: 172 HFAFCGYRDLG---WSQERRTGFVEALGLAGHPCELFEVERPSDLAPFWEGAEADALTLW 228 Query: 178 LQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQ 237 ++ LPP+ ++A +D A +++ E + VPE++ V+G +N+ + L+ +SSVA Sbjct: 229 VRGLPPRVAVMACSDLCAFQVMRAAEAAGVLVPEQMGVLGANNDPMRCELANPPISSVAA 288 Query: 238 GARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNH 297 + Q GYQAA+ L L+ + + + P+ V+ R+STD +++D V A+ YIR H Sbjct: 289 NSFQAGYQAAQHLDELMAGRASGVIDVRIEPLGVVTRKSTDVVAVSDAVVSHALSYIREH 348 Query: 298 ACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEIS 357 ACKG+ VD VL V +SRS LE RF+ VG + A I ++ + LL+ T L + EI+ Sbjct: 349 ACKGVSVDDVLRQVLVSRSKLESRFRRHVGRSPQAEIRRVQVMRIIQLLLETDLPLAEIA 408 Query: 358 QMCGYPSLQYFYSVFKKAYDTTPKEYRDVNS 388 ++ G+ ++Y +FK+ +P YR + Sbjct: 409 ELTGFVHVEYMCVLFKRFTGESPGRYRRKHR 439 >UniRef50_A6DIY5 Xylose operon regulatory protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DIY5_9BACT Length = 386 Score = 328 bits (842), Expect = 2e-88, Method: Composition-based stats. Identities = 110/385 (28%), Positives = 191/385 (49%), Gaps = 12/385 (3%) Query: 4 KRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFI-EEDFRARIDKIKDWLGDGVIA 62 R+ L F + +V+ G+ + A+ W E R I +K+W GDG+IA Sbjct: 10 SMKRVALAFPIGVDHLTEVLYGIRNHPCAAN--WQFLTNPERHRLEIRDLKNWDGDGIIA 67 Query: 63 DFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRF 122 + ++ + + + +P + + G + PV + D + + A +KG F Sbjct: 68 QINSQEEAELIQSLGIPCINISGVLKKS----PVPRVCADYEEIGKKAAEFFLKKGFRNF 123 Query: 123 AFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQTLP 182 A+YG+ + ++ E FR LVA+ Y +Y+ WQ + + L +L+TL Sbjct: 124 AYYGIKKVW---YSAEVYRGFRNLVADHGYEVDLYEAHSGVSTEWQQSNDGLESFLRTLA 180 Query: 183 PQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQM 242 P+T ++A D RA +LQ C + I VPE++ V+G +N+++ L+ LSSVA+ R++ Sbjct: 181 PKTALLAAHDPRAVEVLQTCARIGIKVPEQISVMGENNDKVNCELATPTLSSVARQGRKL 240 Query: 243 GYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGI 302 G++ A+LLH ++ E + + +P + ER ST S+ +P + + + +IR + + I Sbjct: 241 GHKVAELLHSFMNGESVAGDHV-IPCGEIFERDSTAVLSIYNPEIAKVVEFIRLNVLQQI 299 Query: 303 KVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLL-ISTTLSINEISQMCG 361 V+ +G SR LE FKEE+ +T I + + EKA+ LL + +L I E + G Sbjct: 300 NVESAASHIGRSRRWLEYHFKEELQQTPLEFISSVRAEKAKELLELDASLRITEAAYKLG 359 Query: 362 YPSLQYFYSVFKKAYDTTPKEYRDV 386 + S KK Y + KE R Sbjct: 360 FSSTNQLNKYLKKFYGMSAKEIRQK 384 >UniRef50_UPI000174642C xylose operon regulatory protein n=3 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI000174642C Length = 417 Score = 323 bits (829), Expect = 6e-87, Method: Composition-based stats. Identities = 114/392 (29%), Positives = 188/392 (47%), Gaps = 11/392 (2%) Query: 3 TKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFI--EEDFRARIDKIKDWLGDGV 60 ++ +L + +Y R ++ G+G Y + S+ W ++I F ++ W G G+ Sbjct: 9 PGSQQVAVLIDDAGSYSRDLLIGIGRYQRESKKPWALYIIHRRRFEMPPPSLRSWRGQGI 68 Query: 61 IADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVN 120 IA D +++E L + +P+V + G+ P ++ D A ++G Sbjct: 69 IARVDTQEVEAELKSLSLPVVNISGALK----EPFFPTLSQDPLLAAHLALKCFDDRGFR 124 Query: 121 RFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQT 180 AF G S ++W+ ER FR+L+ R L A +A WL++ Sbjct: 125 HHAFVG---DSLQQWSLERWEEFRRLLGARGERCGNL-LLNPGESGAGRAVQIIAKWLES 180 Query: 181 LPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGAR 240 P GI A D +L C +I VPE + V+G+DN+ L+ LSS+ Sbjct: 181 QPRPLGIWAGDDGMGLQVLNACLVSNIRVPEDVAVLGVDNDASIAELASPPLSSIILNGE 240 Query: 241 QMGYQAAKLLHRLLDKEEMPLQRIL-VPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHAC 299 GY+AA+LL R + E +I + P V RRSTD ++ DP V +A+ I+ AC Sbjct: 241 GAGYRAAQLLDRWMGGEPAVTGKIYQLAPAGVAWRRSTDVFAVEDPYVAKALRMIQQEAC 300 Query: 300 KGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQM 359 G++V +V+ V ++R LE RFK V T+ A I + +A+ LL +T + + ++++ Sbjct: 301 AGLRVAEVVGRVPLARRQLEMRFKAAVRRTLLAEIWRVQCRRAQELLETTDIPMVDVAEQ 360 Query: 360 CGYPSLQYFYSVFKKAYDTTPKEYRDVNSEVM 391 CGY L++F VFKK P E+R +M Sbjct: 361 CGYEHLEHFSKVFKKVVGHPPGEHRRNWRRMM 392 >UniRef50_A3ZSV8 Xylose operon regulatory protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZSV8_9PLAN Length = 380 Score = 319 bits (817), Expect = 1e-85, Method: Composition-based stats. Identities = 92/383 (24%), Positives = 175/383 (45%), Gaps = 7/383 (1%) Query: 8 ITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFR-ARIDKIKDWLGDGVIADFDD 66 + +L + + +V G+ YL W++F+E + + K W GDG+IA ++ Sbjct: 1 MGVLIETSTGWGNGMVSGIASYLDDCGESWNVFLEPRGKFEPLHIPKGWNGDGIIARVNN 60 Query: 67 KQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRFAFYG 126 ++ + + +P V V + + D A + K + FA+ G Sbjct: 61 AELAEEILKAGIPCVNVSWYDY---GEGTIARCTLDEEESGRLAAKYYLNKKYSYFAYCG 117 Query: 127 LPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPE-NWQHAQNRLADWLQTLPPQT 185 P R A+ Q + Y Y + W +L WL LP Sbjct: 118 SPWRPDYEDLFGR--AYSQYLQTAGYTCHTYPAPGIDRQQPWIDQLRQLGTWLTKLPKPC 175 Query: 186 GIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQ 245 G++A+ +R ++ + + VPE + V+ +++EL ++R LS + A +GY Sbjct: 176 GVLAIDTQTSRQLIDAAKFAELGVPETIAVLAGEHDELASGITRPKLSMLDNAAHSVGYN 235 Query: 246 AAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVD 305 AA+LL R++ E + + + P VI ++STD+ L+D +++A+ ++R++ I+V Sbjct: 236 AAQLLDRIMRGEANRGELVTIKPTNVISKKSTDWTVLSDERLMRALRFVRDNFHHPIQVA 295 Query: 306 QVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSL 365 + + GISR LE+ F + T I +L++A+ LL + L+++EI+ CG+ S Sbjct: 296 DLAEQAGISRRLLEQLFDRHLEITPSKQILLVRLDEAKHLLDRSVLAMSEIASRCGFDSP 355 Query: 366 QYFYSVFKKAYDTTPKEYRDVNS 388 + F++ +P +YR Sbjct: 356 EVMCRAFQRELQLSPTKYRQTRR 378 >UniRef50_C3QXL3 Transcriptional regulator n=7 Tax=Bacteroides RepID=C3QXL3_9BACE Length = 381 Score = 319 bits (817), Expect = 2e-85, Method: Composition-based stats. Identities = 87/390 (22%), Positives = 179/390 (45%), Gaps = 20/390 (5%) Query: 7 RITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEE-------DFRARIDKIKDWLGDG 59 +I LL + + +DR+++ G+ +Y W + + + K+W D Sbjct: 3 KILLLIDYSSEFDRKLLRGLVQYS-KENGPWLFYRLPSYYSTMHGEQGILKWAKEWKADA 61 Query: 60 VIADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGV 119 +I +++ ++++P+V + +H + +Y + D A ++ Sbjct: 62 IIGQWNN-DTIDLQKELNIPVV-LQNYHHRSVTYSNL---TGDYKGTGRMAAQFFAKRMF 116 Query: 120 NRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQ 179 FA++G+ G W+ ER +RQ V ++ + + + WLQ Sbjct: 117 RNFAYFGVK---GVVWSDERCEGYRQEVKRIGGEFFSFESDKQ----EDEIRMEASQWLQ 169 Query: 180 TLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGA 239 LP + DA A I + C+ +IP+PE++ ++G+DN+EL +S +SS+ Sbjct: 170 QLPKPVALFCCDDAHALFISETCKMTNIPIPEEIALLGVDNDELMCNISDPPISSIELEV 229 Query: 240 RQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHAC 299 + GY +L+H+ + KE I++ P+R+ R+ST+ ++ DP +++ + YI +H Sbjct: 230 ERGGYSIGRLIHQQIKKEHEGTFNIVINPIRIELRQSTEKHNIKDPYILEVVKYIESHYS 289 Query: 300 KGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQM 359 + ++ +L + +SR N E +FK + +I+ I + LL++T + +++ Sbjct: 290 SDLTIESLLANIPLSRRNFEVKFKNALNTSIYQYILNCRCNHLADLLLTTDRPLADLAME 349 Query: 360 CGYPSLQYFYSVFKKAYDTTPKEYRDVNSE 389 G+ +FKK +P EYR + Sbjct: 350 VGFTDYNNIARIFKKFKGCSPIEYRQKKTR 379 >UniRef50_A6C7I7 Xylose operon regulatory protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C7I7_9PLAN Length = 374 Score = 315 bits (808), Expect = 2e-84, Method: Composition-based stats. Identities = 106/377 (28%), Positives = 191/377 (50%), Gaps = 9/377 (2%) Query: 10 LLFNANKAYDRQVVEGVGEYLQASQSEWDIFI-EEDFRARIDKIKDWLGDGVIADFDDKQ 68 +L + + + R V++G+ ++ W ++I D + R+ ++W GDG+IA D + Sbjct: 1 MLIDPDDTWGRSVIQGIASAVRNV-LPWSLWIAPRDQQWRLRVPRNWQGDGIIAAIRDDK 59 Query: 69 IEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRFAFYGLP 128 ++ +D+P V V + YP + + T++ E AF H +E+ + FA+YG P Sbjct: 60 TADHVSGLDLPTVNVSS---WEKDYPDCYRVKTNDTRRAEMAFSHFRERSFSHFAYYGPP 116 Query: 129 ESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQTLPPQTGII 188 +R++ R F+ +V + ++ T E Q R WLQ P I Sbjct: 117 S---QRYSQSRGDYFQDVVQAAGFVCDTFRSRTTTREK-SSIQERTLRWLQQAPRPLAIF 172 Query: 189 AVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAK 248 A + +VC + VPE++ ++ D ++L +S LSS+ + Q+G + + Sbjct: 173 AADPHSGVLLTEVCSAVGFRVPEEIAILVGDTDDLLCNISAPPLSSIVLASEQIGMTSVR 232 Query: 249 LLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVL 308 +L LL +++ + +PP+ VIER+S++ ++ DP ++ A+ +IR A GI+V VL Sbjct: 233 ILESLLKGKKVKSKVHALPPLHVIERQSSEMLAIDDPLLVDALRFIRVRAHTGIQVSDVL 292 Query: 309 DAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYF 368 V ISR +LE+RF++ + T I K+E+ + LLIST ++ +I+ G+ S Sbjct: 293 QTVPISRRSLEQRFRQLLNCTPADEIRRIKIERVKQLLISTDKTVEQIAASSGFCSPGQL 352 Query: 369 YSVFKKAYDTTPKEYRD 385 F+K TP E+R Sbjct: 353 CFAFRKQIGQTPIEFRR 369 >UniRef50_C0A1Z9 Xylose operon regulatory protein n=2 Tax=Opitutaceae bacterium TAV2 RepID=C0A1Z9_9BACT Length = 413 Score = 314 bits (805), Expect = 3e-84, Method: Composition-based stats. Identities = 97/399 (24%), Positives = 183/399 (45%), Gaps = 28/399 (7%) Query: 7 RITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDF-RARIDKIKDWLGDGVIADFD 65 R+ LL + + R +++G+ YL+ + W IF+E I W+G+GVIA+ Sbjct: 20 RVALLVETSTTWARSILDGINNYLRKGHN-WQIFLEPHGSNESIRMPAGWVGEGVIAEIK 78 Query: 66 DKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRFAFY 125 D + + A +++P+V + ++ + +D A A + E+G FA+ Sbjct: 79 DLGMARHFASLNIPVVNLSQVTFRDIAF---PTVTSDIAACARMAGRYYFERGYQNFAYL 135 Query: 126 GLPESSGKRWATEREYAFRQLVAEEKYRGVVY--QGLETAPENWQHAQNRLADWLQTLPP 183 L ++ + F + V + + +W + LADWL LP Sbjct: 136 RLERNALDA---QHSANFGEFVTQAGGSFFSLGVKNRAWGVADWNMSIKALADWLAGLPK 192 Query: 184 QTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMG 243 GI + A R ++Q C + +PE++ ++ + ++E+ +S + +S + Q+G Sbjct: 193 PVGIFSW--AIGREVVQACHLAGLRMPEEVALVMLSDDEIFLEMSHIPISGIMHPGEQIG 250 Query: 244 YQAAKLLHRLLDKEEMPLQRI----------------LVPPVRVIERRSTDYRSLTDPAV 287 ++AA++L L+ + L+ P+ V R+S+D ++TDPA+ Sbjct: 251 HEAAQMLDELMTAAKSKKHAATFSGKSQPAASPPPVRLIQPLGVKTRQSSDVLAITDPAL 310 Query: 288 IQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLI 347 A+ YIR + ++VD V GISR +LE++F + + + I L +A+ LL Sbjct: 311 RTAISYIRQRVGEPLQVDDVARQAGISRRSLEQKFAKTLERSPADYIRDAHLARAKDLLR 370 Query: 348 STTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDV 386 TTL I +++ G+ S +Y +F+ +P YR Sbjct: 371 ETTLPIPQVADAAGFSSPEYMAQLFRAKLGESPLRYRKK 409 >UniRef50_C0A646 Xylose operon regulatory protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A646_9BACT Length = 393 Score = 314 bits (804), Expect = 5e-84, Method: Composition-based stats. Identities = 109/391 (27%), Positives = 173/391 (44%), Gaps = 18/391 (4%) Query: 4 KRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARIDKIKDWLGDGVIAD 63 + R ++L Y V G+ + + + W + + + W DG+I+ Sbjct: 14 SQKRTSILLALAW-YSPAVHRGIIRHAREA--GWIL--DAAVERYKNHFPLWREDGIISY 68 Query: 64 FD-DKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRF 122 D + + + D P+V +G P V + D + A + E+G Sbjct: 69 LHADSALYEFIKKTDKPVVNIGNGKQ-----PGVPTVKPDVRKIGVMAADYFFERGFRDM 123 Query: 123 AFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWL---- 178 AF+ + A ER AFR E R + L + Q+++ L +WL Sbjct: 124 AFFLKSHAP---AARERWRAFRARAEELGARAHLMNWLRHSGGRVQYSEAALVEWLGESV 180 Query: 179 QTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQG 238 LP I+A D A ++ C IP+PE++ V+G++N+ L + V LSS+ Sbjct: 181 TALPKPLAIMAEHDEHAIEVIHACIQFSIPIPEQVAVLGVNNDPLRCEFAPVPLSSIDSN 240 Query: 239 ARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHA 298 MGY+AA LL R+L E P + +L+PP V+ R STD ++ P V +H+I + Sbjct: 241 HEVMGYEAAVLLDRILHGETPPAEPVLIPPAGVVTRLSTDMMAIKHPHVATVLHHIWQNY 300 Query: 299 CKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQ 358 + I V V +S L F + VG TI I +++EKAR LL T +I+ Sbjct: 301 TRAINAKTVAALVPLSYQRLHAAFLKNVGRTIANEITHKRMEKARELLAGTAKKAYDIAL 360 Query: 359 MCGYPSLQYFYSVFKKAYDTTPKEYRDVNSE 389 CG+P+ VFK+ TP EYR N + Sbjct: 361 ECGFPNDDRMGRVFKRVLGVTPMEYRQQNRK 391 >UniRef50_A3ZWC2 Xylose operon regulatory protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZWC2_9PLAN Length = 389 Score = 312 bits (800), Expect = 1e-83, Method: Composition-based stats. Identities = 106/392 (27%), Positives = 173/392 (44%), Gaps = 18/392 (4%) Query: 3 TKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARIDKIKDWLGDGVIA 62 +R +L Y ++ GV + + W + + D +DW GDGVI Sbjct: 12 PQRSATHVLLALGWYYS-EIHRGVARFARDHH--WHVTFDFDDL----VPRDWQGDGVIT 64 Query: 63 DF-DDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNR 121 +QI ++L DVP+V + S P+ + DN A+ + A H ++G Sbjct: 65 LLGAQQQIWRSLQQFDVPMVDLSESR----PDVPLPRVTMDNVAIGQMAAQHFLDRGFRH 120 Query: 122 FAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQ---NRLADWL 178 FAF + R AF +A+ R + Q LA L Sbjct: 121 FAFV---HRWELGVSQRRRDAFTAELAQYDRRCEILSWQTQRGRQADTRQQRHRWLAQRL 177 Query: 179 QTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQG 238 LP I A D A I++ + VP+++ V+G+DN E + LSS+ Sbjct: 178 SELPKPLAIFAPRDIEAVEIIEAAMAISALVPDEISVLGVDNTETICDCLQTPLSSIDNN 237 Query: 239 ARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHA 298 Q+GY+ A LL RL+ E+ P + + P RV+ERRSTD ++ P V A+ +++ +A Sbjct: 238 LEQVGYEGAALLSRLMAGEQSPTETFYIAPSRVVERRSTDSIAVPHPQVAAALRFMQENA 297 Query: 299 CKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQ 358 I + V V +SRS LEK F+E + +L +A+ +L+ T I I++ Sbjct: 298 HLPISMVDVFRTVAMSRSGLEKAFRENYVRPPMEELRRIRLLRAKKMLLQTHEKIVNIAK 357 Query: 359 MCGYPSLQYFYSVFKKAYDTTPKEYRDVNSEV 390 G+ + Q VF++ TPK++R + + Sbjct: 358 STGFETSQNLCRVFRQCVGMTPKQFRTQGAVI 389 >UniRef50_B1ZT55 Transcriptional regulator, AraC family n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZT55_OPITP Length = 411 Score = 311 bits (796), Expect = 3e-83, Method: Composition-based stats. Identities = 100/373 (26%), Positives = 175/373 (46%), Gaps = 20/373 (5%) Query: 21 QVVEGVGEYLQASQSEWDIFIEEDFRARIDKIKDWLGDGVIAD-FDDKQIEQALADVDVP 79 + + G+ + +A +W + ++ F + + W G GV+A ++ L +P Sbjct: 22 ECIRGITRHARAH--DWHLVMDMLFTGAL--PRGWNGSGVLALGAHQPELLAHLQASGLP 77 Query: 80 IVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRFAFYGLPESSGKRWATER 139 V + + + + D+ A+ A H E+ FA+ + R ER Sbjct: 78 CVVLTD----GDPIVDLPRVEPDHRAIGRLAADHFLERAHRSFAWAPFLNDAANR---ER 130 Query: 140 EYAFRQLVAEEKYRGVVYQGLETA-----PENWQHAQNRLADWLQTLPPQTGIIAVTDAR 194 F++ +AE + T +NW + LA L LP T I A D Sbjct: 131 LAGFQERLAEHGRTCRLLPPAHTRIGPYWQDNWDDYRRNLAAELLRLPRPTAIFAFNDCT 190 Query: 195 ARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLL 254 A +++ C+ + VPE + V+G+ L LS V LSSV ++GY+AA LL +L Sbjct: 191 AANVIDCCQDAALAVPEDVAVLGV-GNSLVCELSPVPLSSVDDDMTELGYRAALLLESVL 249 Query: 255 DKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKG-IKVDQVLDAVGI 313 + + +PP ++ R S+D ++TDP V +A+HYI H + V QV +A+G+ Sbjct: 250 SGAGTATRTLRIPPRGIVTRLSSDMAAVTDPRVARALHYIAEHYSNPMLTVCQVAEALGM 309 Query: 314 SRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLI-STTLSINEISQMCGYPSLQYFYSVF 372 SR NLE+ F++E G TIH I A ++ +A LL + ++++ + G + F F Sbjct: 310 SRRNLERSFRDETGCTIHENIIAVRMREASRLLRMHPSTKTSDVAGLVGISGVGTFCRTF 369 Query: 373 KKAYDTTPKEYRD 385 ++ + +P+ +RD Sbjct: 370 RRHFGMSPQAHRD 382 >UniRef50_A3ZWJ4 Xylose operon regulatory protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZWJ4_9PLAN Length = 400 Score = 309 bits (793), Expect = 8e-83, Method: Composition-based stats. Identities = 102/389 (26%), Positives = 174/389 (44%), Gaps = 8/389 (2%) Query: 1 MFTKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEED-FRARIDKIKDWLGDG 59 ++ R RI LL + R ++EGV + A WD ++ + + DW G+G Sbjct: 7 VYPDRLRIALLVLNESQWSRSILEGVSRFA-AEHGGWDFWLHPRAMKTQALMPADWKGEG 65 Query: 60 VIADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGV 119 +IA D+ + +L D+P + V + +P + D E A ++G Sbjct: 66 IIARIADEHVRASLERHDMPTINVSWHSEQSRRFPK---VIADPQGSGELAGNFFVQRGF 122 Query: 120 NRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPE-NWQHAQNRLADWL 178 F + G P R + +++ E Y + +P ++ + ++RL W+ Sbjct: 123 QHFGYIGPPLCYNYRDPVQPAA--ERVIEEAGYSLRSFSPDPASPSSDYDYQRSRLVQWV 180 Query: 179 QTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQG 238 ++LP G+IA + AR I+ C I VP + V+ ++++ L LS + +S + Q Sbjct: 181 RSLPKPIGVIAFSTVVAREIMLTCSAEGINVPNDVAVLAVEHDPLISQLSPMPISYIQQR 240 Query: 239 ARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHA 298 +GY+AA+ L RL+ + I + P +IE+ STD D V A+ YI+ +A Sbjct: 241 PELVGYEAARELRRLISGGTPRDEPIAIAPEGIIEKPSTDTIFAADSMVQNAVAYIKQNA 300 Query: 299 CKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQ 358 I V + + +SR +LE RF++ + T I +L + L T LS+ EIS Sbjct: 301 DSAINVSDLTRFLDVSRRSLEDRFRKALNRTPAEEIRFARLLVLKDFLRQTNLSLAEISA 360 Query: 359 MCGYPSLQYFYSVFKKAYDTTPKEYRDVN 387 G+ FK+ TP EYR Sbjct: 361 KSGFSCENSTLRFFKRMTGMTPGEYRRNY 389 >UniRef50_B4D2S2 Transcriptional regulator, AraC family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D2S2_9BACT Length = 385 Score = 304 bits (780), Expect = 2e-81, Method: Composition-based stats. Identities = 109/390 (27%), Positives = 178/390 (45%), Gaps = 13/390 (3%) Query: 1 MFTKR--HRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFR--ARIDKIKDWL 56 M T+R R+ LL + Y R+++ GV Y+ A+ W F+E + ++DW Sbjct: 1 MPTRRRTPRVALLIETTRTYTRELLAGVRRYI-AAHGPWSTFLELRALDSSPPAWLRDWD 59 Query: 57 GDGVIADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKE 116 GDG++ Q+ + + +P + + Y+ DN + S H E Sbjct: 60 GDGILTRTFTPQMGRLIEATGLPAIEL----RTTNFGGSRPYVGMDNRLIGASVAEHFLE 115 Query: 117 KGVNRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVY-QGLETAPENWQHAQNRLA 175 +G +FA Y L S ER F V R + + ++W+ +Q RL Sbjct: 116 RGYRQFAAYSLHTESFF---VERIRNFVTTVEALGARCSRLPETTSDSAKDWEKSQARLV 172 Query: 176 DWLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSV 235 WLQ LP GI A D +L+ C+ + VPE++ V+G +NEE + L+SV Sbjct: 173 AWLQELPKPVGIFAANDQLGVRLLEACQRAGVAVPEEVAVVGAENEETLCSFATPPLTSV 232 Query: 236 AQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIR 295 + +GY AA++L +L+ + +L+PP ++ R S+D + DP V A IR Sbjct: 233 RYDGQAVGYAAAEMLDQLMRGRRLRRSAVLIPPKGIVVRHSSDSLVINDPFVAHAARLIR 292 Query: 296 NHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINE 355 A G+ VDQ+ + SRS L++R K + T I + + LL T L+I+ Sbjct: 293 EEALHGLNVDQLCHKLNASRSTLDRRMKAALQRTPKEEILRVRFREVERLLRETDLTIDT 352 Query: 356 ISQMCGYPSLQYFYSVFKKAYDTTPKEYRD 385 I+ G+ Y + FK+ + TP +R Sbjct: 353 IAAQTGFAHSHYLQAAFKETHGVTPGAWRR 382 >UniRef50_A3ZVD0 Xylose operon regulatory protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZVD0_9PLAN Length = 416 Score = 303 bits (777), Expect = 6e-81, Method: Composition-based stats. Identities = 108/385 (28%), Positives = 179/385 (46%), Gaps = 11/385 (2%) Query: 6 HRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARIDKIKDWLGDGVIADFD 65 H+ITL + +++ GV +Y + I+ + DG+IA + Sbjct: 37 HKITLAVVPSSDNQVRMIRGVMQYATETGRIQITKRAAIPYVPIELLDKLAADGIIAYAE 96 Query: 66 DKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRFAFY 125 ++ L + +P V + +E V + +DN + HL G+ FAF Sbjct: 97 SQERINFLQSLGIPFVNLTLQ---SEPEAGVPVVHSDNLQIGRRLAEHLLSLGLRNFAFV 153 Query: 126 GLPESSGKRWATEREYAFRQLVAEEKYRGVVYQ-----GLETAPENWQHAQNRLADWLQT 180 G R R+ F Q +AE + L + Q Q L + Sbjct: 154 GHFAWYHNRM---RQTGFLQRLAESGFDAASIDISFDSELSLETSDRQVHQGELQQAIAG 210 Query: 181 LPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGAR 240 LP G+ + D A I++ C+ + +P + VIG+++ L + LSSVAQ + Sbjct: 211 LPEPCGVASCHDEFAHEIVEACKVIGRSIPHSVSVIGVNDYRLICETTMPGLSSVAQNSE 270 Query: 241 QMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACK 300 ++GY AA+L+ +L++ E P + ILVPP ++I RRS+ + +L D V+ A+ +IR+ + Sbjct: 271 RIGYLAAQLVDQLIEGAERPAKPILVPPGQLIVRRSSQFLALGDANVVAAVEFIRDRCHR 330 Query: 301 GIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMC 360 I V V+D + +SR LEKRFK +G +I I ++ A+ LL ST LSI +++ Sbjct: 331 PITVTDVVDHLHLSRKVLEKRFKTAIGHSIAHEIRLSRMRNAQHLLTSTPLSIVDVAVRS 390 Query: 361 GYPSLQYFYSVFKKAYDTTPKEYRD 385 G+ S F F++ TP YR Sbjct: 391 GFDSTSGFIRAFREHTGVTPANYRK 415 >UniRef50_B4CUN0 Transcriptional regulator, AraC family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUN0_9BACT Length = 383 Score = 291 bits (746), Expect = 3e-77, Method: Composition-based stats. Identities = 99/395 (25%), Positives = 174/395 (44%), Gaps = 21/395 (5%) Query: 2 FTKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARIDKIKDWLGDGVI 61 + + + YD ++++G+ Y + W + ++ W GDGV+ Sbjct: 1 MARTKNVLVAL---GWYDHRLLQGIATYATEHR--WHLAAHSIIHEKV-IPWGWEGDGVL 54 Query: 62 ADFDD-KQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVN 120 A + +A V P V + + P ++ D+ + H ++G+ Sbjct: 55 AWLAAGDDLAHFVASVKKPTVDFS----MRRPHLPFAHVVQDHAKTGQLVASHFLDRGLR 110 Query: 121 RFAFYGLPESSGKRWAT-EREYAFRQLVAEEKYRGVVYQGLETAPEN-----WQHAQNRL 174 F FY S + W+ ER F + + ++ ET+ + W + L Sbjct: 111 HFRFY----SDSENWSQVERGEGFARALTASGEECEWWRWRETSGQGSGQNQWLRRREWL 166 Query: 175 ADWLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSS 234 +Q+ P + A I +VC I VP ++ ++GID+ L+ + ++S Sbjct: 167 LRQIQSAPKPLAVFTANGTLAVEIQEVCAEAKIQVPSEVAIVGIDDYLLSVGAANRSISG 226 Query: 235 VAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYI 294 V + GY+ A+LL R++ P++ + +PP +VI R+S+D ++ V + +H+I Sbjct: 227 VDTNLEEQGYRGAELLDRMMRGARQPVKPVRIPPAQVITRKSSDILAVNHGGVARGLHFI 286 Query: 295 RNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSIN 354 H + I VD V A G+SR L + F E VG T I +L A+ LL T I Sbjct: 287 AEHFAQAISVDDVARAAGMSRRGLHQAFSEHVGCTPGDKIRGVRLNLAKRLLAETEDKIE 346 Query: 355 EISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSE 389 I+Q GYPS+ F+ F++A TTP E+R + Sbjct: 347 SIAQQSGYPSINTFFIAFRRAEKTTPAEFRKIARR 381 >UniRef50_B5JEL5 Transcriptional regulator, AraC family protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JEL5_9BACT Length = 387 Score = 287 bits (734), Expect = 6e-76, Method: Composition-based stats. Identities = 107/396 (27%), Positives = 185/396 (46%), Gaps = 23/396 (5%) Query: 2 FTKRHRITLLFNANKAYDRQVVEGVGEYLQASQ-----SEWDIFIEEDFRARIDKIKDWL 56 TK RI ++ + + Y RQ G Y + W E + +K Sbjct: 1 MTKAKRIQVVPDMSLEYFRQATVGALRYAFNTGRMEFPGRW--LDHERYGDISPLVKRDD 58 Query: 57 GDGVIADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKE 116 G+I D E AD+++P+V + S P + + D+ ++ A HL + Sbjct: 59 IHGLIVAAHDAAEEARFADLEIPVVNISNSMSA----PRIPVVTQDDVSVGRLAAEHLID 114 Query: 117 KGVNRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLAD 176 +G FAF+G GK ++ ER FRQ + + + P + + Sbjct: 115 RGCRNFAFWG---DKGKSYSDERLQGFRQTLGSRPLQVKLGGRNRVRPHPVFKS---MKA 168 Query: 177 WLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVA 236 +++TLPP+TG+ A D A + L+ L VP+ + V+G +++ + V LSS+ Sbjct: 169 FMKTLPPKTGLFATLDDSALYFLRAARELGRSVPDDIAVLGAGDDDFLVEIESVPLSSIR 228 Query: 237 QGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRN 296 AR++GYQAA LL +++K+ + I +P + ER STD DP V + M Y+R+ Sbjct: 229 LPAREIGYQAAALLDEMIEKDTRNVDSIRLPVHGISERHSTDALQFEDPVVTKVMRYLRD 288 Query: 297 HACKGIKVD--QVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSIN 354 I ++ G+SRS L+ RF+ VG ++ IH ++ +A+ LL ++ L++ Sbjct: 289 ----DITCQASDLIAISGVSRSGLQTRFRAAVGRSLLEEIHRARISQAKHLLATSDLTLE 344 Query: 355 EISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSEV 390 I+ G+ S Q +++F K+ T P +R N + Sbjct: 345 NIADRVGFNSAQRLHAIFTKSVGTPPGVFRTRNRAI 380 >UniRef50_A6DP72 Xylose operon regulatory protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DP72_9BACT Length = 375 Score = 280 bits (716), Expect = 7e-74, Method: Composition-based stats. Identities = 93/376 (24%), Positives = 185/376 (49%), Gaps = 12/376 (3%) Query: 4 KRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEED-FRARIDKIKDWLGDGVIA 62 + RI L F ++ + G+ Y + +W + + +I +I DG+IA Sbjct: 2 NKKRIALAFPMGSSHWEKTAYGIRSYCNQERDKWKLITNPETHDLKISEINLDAIDGIIA 61 Query: 63 DFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRF 122 +K L VP V + G+ ++ + + D Y + + A H E+G F Sbjct: 62 VVRNKTDLDHLKKHSVPCVNISGTLQKSD----LPRVCPDFYQMGQLAAQHFFERGFQNF 117 Query: 123 AFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQTLP 182 A++GL E+ ++ F + ++++ + T N+ + ++L++L Sbjct: 118 AYFGLSETV---FSERMYQGFHKELSKKTKTCEKLEV--TFGANFLEQDELIHEFLKSLK 172 Query: 183 PQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQM 242 I+A D RA+ +L+ CE + + VPE + ++G +N+ ++ S LSS+ + +++ Sbjct: 173 LPCAILAAHDPRAQILLEACEEMALRVPEDIAILGSNNDTVSCEFSSPPLSSIERDDQKI 232 Query: 243 GYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGI 302 G++AAK L L+ + E +++PP++V R+ST+ + P + +A+ +I + + Sbjct: 233 GFEAAKALDMLMRQ-EACQHELIIPPLKVKTRKSTEIFTPKHPEIKRALDFIEEQFDQSL 291 Query: 303 KVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLI-STTLSINEISQMCG 361 V + D +G SR LE F+EE+ ++ I +L+KA LL S+ L++++ISQ G Sbjct: 292 NVQMICDYLGRSRRWLEYAFREELQQSPKHFIDERRLKKALQLLQGSSQLNLSQISQQSG 351 Query: 362 YPSLQYFYSVFKKAYD 377 + S+ +F K + Sbjct: 352 FSSVDQMNQLFIKKHG 367 >UniRef50_A4BCC5 PurR protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BCC5_9GAMM Length = 371 Score = 275 bits (704), Expect = 2e-72, Method: Composition-based stats. Identities = 113/382 (29%), Positives = 187/382 (48%), Gaps = 17/382 (4%) Query: 10 LLFNANKAYDRQVVEGVGEYLQASQSEWDI-FIEEDFRARIDKIKDWLGDGVIADFDDKQ 68 +LF+ + YDR++ +G+ + + S I F+ D + +DW D +IADFD Sbjct: 1 MLFDIKQPYDRKITDGILDAMHNSNRNLQITFMTYDEALLVAHDQDW--DAIIADFDRLP 58 Query: 69 IEQALADVDVPIVGVGGSYHLAESYPPVHYI--ATDNYALVESAFLHLKEKGVNRFAFYG 126 A + P V V + + I A D+ + + A HL G +FA++ Sbjct: 59 NIDLCASLKAPTVAVFSNLQRMPELTDIPVIFLAPDSEKICQLARDHLLACGCRQFAYFA 118 Query: 127 LPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQTLPPQTG 186 WA ER F+Q V EE ++ Q L P TG Sbjct: 119 GTADDIGLWARERRLCFKQAVLEEGLNWAGAYTTQSIRHFLQTD----------LAPGTG 168 Query: 187 IIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQA 246 + +D +AR ++ + ++L+I +P +LCVIGIDN+E+ LSR+ +S+V +G A Sbjct: 169 FLCASDTQARQLITLAQNLNISIPSQLCVIGIDNDEVENQLSRIPISTVTLAPSDLGKAA 228 Query: 247 AKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQ 306 + L L + + + L+ P V+ R S DP + A+ +I H + IK +Q Sbjct: 229 FEALFELSTQHQPVTK--LIQPGEVMNRLSAFLEVNDDPLLSTALKFIYKHYHRSIKAEQ 286 Query: 307 VLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQ 366 V+ SR+ LE RFK + ++IH ++H +LE A+ +L +T I+E++ CG+ S Q Sbjct: 287 VIAECKTSRNTLESRFKTVLEKSIHQVLHDVRLENAKDMLKNTRKGIDEVAIQCGFSSPQ 346 Query: 367 YFYSVFKKAYDTTPKEYRDVNS 388 Y Y +F+K TP +YR++N+ Sbjct: 347 YLYYIFRKELGMTPTKYRELNT 368 >UniRef50_D2R9H5 Transcriptional regulator, AraC family n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R9H5_9PLAN Length = 416 Score = 275 bits (704), Expect = 2e-72, Method: Composition-based stats. Identities = 90/411 (21%), Positives = 177/411 (43%), Gaps = 32/411 (7%) Query: 2 FTKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARI--DKIKDWLGDG 59 K R+ ++ + R G A++ W+ I+E + + L DG Sbjct: 1 MPKSRRVAIMLDLRWPLKRHADIFAGTQRYAAEKGWESVIDEYVAEHLLEQPKQARLYDG 60 Query: 60 VIADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGV 119 VI ++ + + +P+V + + + P + D A+ HL +G+ Sbjct: 61 VIGRIP-ARLAELQSRFPIPLVNIWFNSPVRAPLPG---VFHDAAAVGRLEAEHLLARGL 116 Query: 120 NRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGL---ETAPENWQHAQNRLAD 176 +FA + + E+ AFR +V+E + +V + + W+ + + Sbjct: 117 RQFAVLTRKDKAQ----LEQAAAFRAVVSEAGFPCIVERLPLVPSRSYATWKKTERLIDS 172 Query: 177 WLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVA 236 W+ P G+ T+ R ++Q+C +P + ++ NEE R +LSSV Sbjct: 173 WMDHWQPPIGVSICTEVMGRLVVQLCRRRGWRIPGDVAIVAGMNEETLCTHPRPSLSSVE 232 Query: 237 QGARQMGYQAAKLLHRLLDKEEMPLQ-------------------RILVPPVRVIERRST 277 G ++GY+AA+LL +L+ ++ + + +++PP +I R ST Sbjct: 233 IGYERIGYEAARLLDQLMHQQSLRSRSKKRLSHLQPSARKPSQPPHLILPPQGMIVREST 292 Query: 278 DYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAE 337 D+ ++ D + QA+ +I +H+ I D V +++ + L++RF++ + I I Sbjct: 293 DFYAVEDKLIAQALEFIASHSHLPINCDTVAESLHVHTRTLQRRFRQVLDRPIADEIRRV 352 Query: 338 KLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNS 388 + E+A+ LI + S+ EI++ G+ Y VF + TP YR Sbjct: 353 RTERAKRELIQSDRSLTEIARDVGFSDRMQLYEVFCREVGVTPSHYRKQRR 403 >UniRef50_UPI00019688DE hypothetical protein BACCELL_02763 n=1 Tax=Bacteroides cellulosilyticus DSM 14838 RepID=UPI00019688DE Length = 372 Score = 274 bits (701), Expect = 4e-72, Method: Composition-based stats. Identities = 104/364 (28%), Positives = 169/364 (46%), Gaps = 8/364 (2%) Query: 25 GVGEYLQASQSEWDIFIEEDFRARIDKIKDWLGDGVIADFDDKQIEQALADVDVPIVGVG 84 G + + S D E+ ID + W D ++ + + L + +P++ Sbjct: 4 GNWRFYRIPLSREDFNDEKAIETVIDIAQRWGADAIMGQLSEVNT-ERLRSIGIPVI--- 59 Query: 85 GSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRFAFYGLPESSGKRWATEREYAFR 144 + + I D Y E A + KG FAFYG ++ W+ ERE F Sbjct: 60 -LQNYTNRVDGISNITGDYYGTGEMAANYFLRKGYTNFAFYGTSDT---IWSREREEGFC 115 Query: 145 QLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQTLPPQTGIIAVTDARARHILQVCEH 204 +AE +Y Q L WLQ LP T + A D A I +VC Sbjct: 116 TRLAEVGQHAYIYNEESNIRYGSTSDQQALQAWLQQLPHPTALFACDDVFALRITEVCGI 175 Query: 205 LHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRI 264 +I VP+ L V+G+DN+E+ +S LSS+ + GYQAAKLLH ++ +++P I Sbjct: 176 SNIQVPQDLAVLGVDNDEILCNMSDPPLSSIVLDVKNGGYQAAKLLHSIVKDKQLPQFNI 235 Query: 265 LVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKE 324 ++ P+R+ R+ST+ S++D V+ A+ I I + ++L+ + +SR LEK F++ Sbjct: 236 VINPIRIERRKSTEGYSVSDKLVLGALKLIETENNGLISITEILNRLCVSRRVLEKHFRK 295 Query: 325 EVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 EVG +I+ I + L+++ L I +I+ GY FK+ Y TP +YR Sbjct: 296 EVGISIYQYILDYRTSCFAEKLLTSDLPIMDIAFELGYEDYINLTKSFKRIYQMTPTQYR 355 Query: 385 DVNS 388 + Sbjct: 356 NYYK 359 >UniRef50_A6DPD5 Xylose operon regulatory protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DPD5_9BACT Length = 376 Score = 272 bits (697), Expect = 1e-71, Method: Composition-based stats. Identities = 84/385 (21%), Positives = 159/385 (41%), Gaps = 15/385 (3%) Query: 2 FTKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARIDKIKDWLGDGVI 61 +K I L + YD ++ +GV + ++ W + ++ W GDG I Sbjct: 1 MSKTPEIILALDW---YDYRIHQGVVNVAR--ENGWSLLFLQNSFRSSAVPAAWRGDGAI 55 Query: 62 ADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNR 121 + Q +P+V +G + H + + TDN L A H E+G Sbjct: 56 TLIHSAETYQFFQTHKIPVVDLGLNKHGLA----IPRVVTDNVELGRMAAEHFLERGFTH 111 Query: 122 FAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQH-AQNRLADWLQT 180 F Y L ++ + + ER AF++ + ++ Y + + + +Q L L Sbjct: 112 F--YALSTNNIQMF-QERYQAFKETLMKKGYDCEIIEVPNLYDTHLLDLSQAILKQKLSK 168 Query: 181 LPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGAR 240 + A D+ A + + E + + VP L ++G DN L LSSV Sbjct: 169 FKNPAALFAYEDSWAAQWIYLAESMGLKVPNDLAILGADNNPLIARSLSTPLSSVETNQE 228 Query: 241 QMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACK 300 +G QAA +L L++ + + + P V+ R STD + ++P + A+ + N Sbjct: 229 GLGQQAALVLKDLMEGKGIGDHLYKLQPTSVVTRASTDVIASSNPVIRTALEIMNNDIS- 287 Query: 301 GIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMC 360 I +V + +++ L++ F+ + ++ ++ ++ L+ T S+ EI+ Sbjct: 288 -ITAAEVAQQMDMTQQGLQRAFRTHFHLSPGQILRKLRIRFIKNALVHTDKSMEEIAFEA 346 Query: 361 GYPSLQYFYSVFKKAYDTTPKEYRD 385 G+ S Y FK+ TP Y+ Sbjct: 347 GFTSTPSLYLFFKREAGETPGNYKK 371 >UniRef50_UPI0001745892 xylose operon regulatory protein n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001745892 Length = 394 Score = 266 bits (681), Expect = 7e-70, Method: Composition-based stats. Identities = 95/390 (24%), Positives = 161/390 (41%), Gaps = 22/390 (5%) Query: 12 FNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARIDKI---KDWLGDGVIADFDDKQ 68 F + + R V +G+ +++QA W I D + + W GDG+I Q Sbjct: 5 FPSWITFQRGVFDGILKFMQA-HEPWVIEAPMDSGGELAPVVIGPRWHGDGLIVFRYTPQ 63 Query: 69 IEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRFAFYGLP 128 A +P+V + I DN +A HL G+ FA+ G Sbjct: 64 EATAWRKAGIPVVNLSTERLGGV----FPSIVPDNEGGGAAAAKHLLTLGLRHFAYVGRA 119 Query: 129 ES----------SGKRWATEREYAFRQLVAEEKYRGVVYQGLETA--PENWQHAQNRLAD 176 +R++ ERE FR+ + E + +++Q W+ + Sbjct: 120 TPFVDDGLTGLGVARRYSQEREAGFRKTLEEAGFTPLLFQVSTRRNNGPVWEELHETYSG 179 Query: 177 WLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVA 236 LQ LP G+ A D A +LQ + VP+ + ++G +++ + LSSV Sbjct: 180 LLQALPRPCGVFAADDMLAHGLLQAAQSSGARVPQDVALVGFNDQSHFCQAATPPLSSVT 239 Query: 237 QGARQMGYQAAKLLHRLLDKEEMPLQRI-LVPPVRVIERRSTDYRSLTDPAVIQAMHYIR 295 +G +AA+ ++ L+ P I VP V R ST+ S+ DP V A+ IR Sbjct: 240 YPGEAIGLRAAEAIYALMQGLPAPGGHIQRVPVSGVTIRESTNVLSIRDPLVASAVRLIR 299 Query: 296 NH-ACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSIN 354 A +V ++ D +G+S S L +RF E +G + + +L+ R L +T L Sbjct: 300 KQAAATAPRVGEIADQLGVSASLLRQRFLEALGISPKEEVDRARLDIIRHWLTTTKLGPG 359 Query: 355 EISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 +I+ G+ F++ T ++YR Sbjct: 360 DIAAKTGFLDAAELRRFFRRGTGQTLQDYR 389 >UniRef50_B5JIL8 Transcriptional regulator, AraC family protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JIL8_9BACT Length = 455 Score = 266 bits (681), Expect = 7e-70, Method: Composition-based stats. Identities = 94/388 (24%), Positives = 163/388 (42%), Gaps = 16/388 (4%) Query: 7 RITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARIDKIKDWLGDGVIADFDD 66 R T ++ +++ ++G+ Y + W + D + WLG GVI Sbjct: 79 RQTKIWVSSQTAQPSFLQGIIRYAKK--QSWQL--TTDLLQSGNVSGSWLGHGVIKYLPV 134 Query: 67 KQIE-QALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRFAFY 125 + Q + D+P V S + DN+A+ A HL + FA+ Sbjct: 135 PTFDSQTPSSTDLPCVTASLSDQPTTGL----RVQADNFAIGRQAAEHLINRNCRNFAWL 190 Query: 126 GLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGL--ETAPENWQHAQNRLADWLQTLPP 183 + R F + + + +T+ + + +Q L Sbjct: 191 PYAHDKTNQI---RYMGFLSHLRDRGFSCRQLAPPLLDTSVDPCRERILWRQAMIQPLEG 247 Query: 184 QTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMG 243 +TG+ A +D+ A + ++ VPE L ++GI N+ + ++LSS+ ++G Sbjct: 248 RTGLFASSDSLAIEVAELVGETGTRVPEDLAILGIGNQTAECESAPISLSSIDPNLEELG 307 Query: 244 YQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKG-I 302 +QAAKLL L E I V P V R ST +L + V QA+ +I NH + Sbjct: 308 FQAAKLLDAALKSETNANSCIHVSPTGVEARDSTAISNLENQRVAQALVFISNHYPDPRL 367 Query: 303 KVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLIS-TTLSINEISQMCG 361 V V +++ ISR LE+ F+ E G TI I ++ +A LL L+++ I+ G Sbjct: 368 GVCSVAESLNISRRQLERDFRNEKGCTIREFIEHTRMNEASRLLSERPALTVSAIADQVG 427 Query: 362 YPSLQYFYSVFKKAYDTTPKEYRDVNSE 389 + F+ +F+K + TP YR+ + Sbjct: 428 ISAQGNFFRIFRKHFGLTPSAYREQQTS 455 >UniRef50_D1N410 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N410_9BACT Length = 380 Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats. Identities = 94/395 (23%), Positives = 166/395 (42%), Gaps = 25/395 (6%) Query: 1 MFTKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARIDKIKDWLGDGV 60 M +R + L + ++ +G+ +Y +A W + I R + ++ W G+G+ Sbjct: 1 MEKERKTVLLAL---AWHLEKLTQGIADYARAHN--WHLLIHRGGELR-EILRRWRGNGI 54 Query: 61 IADF----DDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKE 116 I+ F D E+ LA + + P + D+YA+ A + Sbjct: 55 ISSFWNAYTDSATEEVLAARSWDATRMVSLVPIRNPRIPCRVVREDDYAIGTLAAEYFLG 114 Query: 117 KGVNRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLAD 176 G +A Y R FR + + A + + L Sbjct: 115 TGHRNYAVYSDSV---------RMTGFRDRLRRSGFACCDLSPYRAA----EREEAELLG 161 Query: 177 WLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVA 236 WL+ LP + D A +L I VP++L ++G+ N+EL + V+LSSV Sbjct: 162 WLRELPKPCAVFCENDWDAAELLNTAFWGKIAVPDELAILGVGNDELVCMAASVSLSSVD 221 Query: 237 QGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVR-VIERRSTDYRSLTDPAVIQAMHYIR 295 ++G AA L +L+D E P + + P V+ERRSTD+ ++ +P +I+ + Y R Sbjct: 222 SRLYELGQLAAAELDKLIDGTEAPEGALFLKPEPLVVERRSTDFYAVENPELIRMIEYFR 281 Query: 296 NHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLI-STTLSIN 354 NHAC+ V + S S L K F + + + ++L A S L + Sbjct: 282 NHACEPFSVAEAARRFHTSESALYKLFVRNLKISPKQFVLEQRLRNACSYLKMERAWPME 341 Query: 355 EISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSE 389 E+++ G+P+ +S F+K + T+P +R + Sbjct: 342 EVARRAGFPTACAMFSTFQKRFGTSPGNWRKNSRS 376 >UniRef50_D1N888 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N888_9BACT Length = 379 Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats. Identities = 84/393 (21%), Positives = 164/393 (41%), Gaps = 20/393 (5%) Query: 1 MFTKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARIDKIKDWLGDGV 60 M K I F Q+++ + Y + W I + + + W GDGV Sbjct: 1 MPKKTPYILCAFKQPND---QLLQPI--YAFGQRQGWLIELCTET-----LPQSWQGDGV 50 Query: 61 IADFDDKQIEQALADVD-VPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGV 119 I+D+ + AL D+ +P+V + V + +D A+ A +G Sbjct: 51 ISDYLTLEELAALRDIGKIPVV-----SRILPPGGNVRSVLSDTRAVARVAVDFFAGQGF 105 Query: 120 NRFAFYGLPESSGKR--WATEREYAFRQLVAEEK--YRGVVYQGLETAPENWQHAQNRLA 175 FA + G+ A +L E Y +E P + + Sbjct: 106 RVFASVSARDFPGEVCGIPVSPGRALLELTRERGLEYHAHYCAPVEGNPPAYPEMVAGIR 165 Query: 176 DWLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSV 235 ++L+ LP + + + + E L + VPE++ ++ L + V LS + Sbjct: 166 EFLRNLPKPAALTLTSVWVVAPVWRAVEELELRVPEEIAILCNSQRPLYTCYTPVPLSGI 225 Query: 236 AQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIR 295 + +G + A+ + ++LD +++PL+ +V P VI R STD ++ + A+ ++ Sbjct: 226 SGEHGTVGLKLAETMQKMLDGDDVPLEPEVVSPSAVIRRASTDIIAVPHLKLATAIRFLI 285 Query: 296 NHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINE 355 + + + + G+S+S L + F+ +G T + ++++ ++LL ST LS++E Sbjct: 286 QNCGTSVGIGEAARYAGLSQSMLNRLFRRYLGRTAAGFLQQLRIDRMKNLLDSTGLSLSE 345 Query: 356 ISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNS 388 I+ GY S F++A P YR++ Sbjct: 346 IAAQTGYSSPVSLSLAFRRATGMQPGAYRELRR 378 >UniRef50_C0AAZ9 Transcriptional regulator, AraC family n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0AAZ9_9BACT Length = 409 Score = 262 bits (669), Expect = 2e-68, Method: Composition-based stats. Identities = 87/399 (21%), Positives = 174/399 (43%), Gaps = 22/399 (5%) Query: 8 ITLLFNANKAYDRQVVEGVGEYLQASQSEW--DIFIEEDFRARIDKIKDWLGDGVIADFD 65 + +L + + Y R V G Y ++ D +++ + + + + G+I Sbjct: 18 VQILHDGSLEYFRNVTLGARHYAFDTKRFVLADRWLDHETASWHELVARDAIQGIIVAAH 77 Query: 66 DKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRFAFY 125 +++ + + + + + D+ + A HL G F F+ Sbjct: 78 REEMVKQFTALK----VPVVNVSNVVPQLRLPLVTQDDVGVGRLAAEHLLACGCRAFGFW 133 Query: 126 GLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQTLPPQT 185 G R++ +R FR ++ + ++ ++A E + R+ +WL LP Sbjct: 134 G---EWASRFSEQRLTGFRDVLGKHGLGQALHVNGQSAMEPATESFARMVEWLPLLPRPI 190 Query: 186 GIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQ 245 G V D A ++ + L VP+ + V+G ++E V LSSV + ++GY+ Sbjct: 191 GFFCVMDTMALYLQRAVTSLGWRVPDDVAVLGAGDDEFWVKFENVPLSSVKLPSLKIGYE 250 Query: 246 AAKLLHRLLDKEEMPLQ-------------RILVPPVRVIERRSTDYRSLTDPAVIQAMH 292 AA L L+ + + ++P + R+STD ++D AV +A+ Sbjct: 251 AAAFLDELIVRGRRRREAGWSEDGGQGRVPVRVLPVSEIAARQSTDTLFVSDEAVARAVR 310 Query: 293 YIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLS 352 +IR +A + + VD+++ A G++R+ L++RFKE +G ++ + ++ A+ LL + L Sbjct: 311 HIRANAARELYVDEIVRAAGVARTALQRRFKEVLGHSLMDELTRARIVLAQGLLAGSDLP 370 Query: 353 INEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSEVM 391 + +++ G PS VF+ +P EYR VM Sbjct: 371 METVAERSGLPSSHRLSVVFRAETGMSPTEYRRKFRVVM 409 >UniRef50_C0ACC5 Transcriptional regulators-like protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0ACC5_9BACT Length = 397 Score = 259 bits (663), Expect = 9e-68, Method: Composition-based stats. Identities = 91/389 (23%), Positives = 161/389 (41%), Gaps = 16/389 (4%) Query: 1 MFTKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARIDKIKDWLGDGV 60 + R L ++ G+ Y + +++W + + + DG+ Sbjct: 16 IPKMNPRHVLAHLYWST--PRLEYGIRAYAR--EADWTLSFMRNAQDYP--TGSTKVDGL 69 Query: 61 IADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVN 120 IA +++ + IV + G + +P I D+ + A +L G Sbjct: 70 IAFIGHTKVDFRQLYPNAKIVDLRGL----DEFPADSSIRIDHEHVSRLAADYLYNLGYR 125 Query: 121 RFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPE---NWQHAQNRLADW 177 RF +G R +F++ + E + N + R+ Sbjct: 126 RFLAFGCKPV---EPIVTRIRSFQRCLEERGLTVEEIFLNYWTEQIVINPGDLKARITKI 182 Query: 178 LQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQ 237 ++ + A D A +Q L +P+ + V+G++N RV +SS+ Sbjct: 183 VRKTGLPLAVYAPDDMYAEAFIQTALDLGYRIPQDIAVLGVNNSRDICEECRVPISSIDV 242 Query: 238 GARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNH 297 ++GY+ A+LL L+ + QRI++PP+ + +R+STD + TD V+ YIR H Sbjct: 243 NFSRLGYEGARLLDGLMRGDIRKFQRIVIPPLTIEKRQSTDSAAETDKTVVAIQQYIREH 302 Query: 298 ACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEIS 357 + I ++ VL + ISRS RF VG I I ++ AR LL ST I+ ++ Sbjct: 303 FAERITIETVLRDLHISRSMAFVRFTRAVGHPIGREIINVRISHARHLLTSTDYKIDVVA 362 Query: 358 QMCGYPSLQYFYSVFKKAYDTTPKEYRDV 386 +MCGY F +FK+ + +P YR Sbjct: 363 RMCGYEDTSAFGRLFKQLHQQSPAAYRKK 391 >UniRef50_D1N1K4 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N1K4_9BACT Length = 388 Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats. Identities = 74/392 (18%), Positives = 153/392 (39%), Gaps = 22/392 (5%) Query: 5 RHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARIDKIKDWLGDGVIADF 64 +I + Q+V + + + +W + + W GDGV+ D Sbjct: 1 MRQILCAMMSPND---QIVREIHRFGRDH--DWQVELCGG-----RIPPGWSGDGVLTDC 50 Query: 65 DDKQIEQALADV-DVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRFA 123 + + + + P+V H V +A D + E + ++G FA Sbjct: 51 LPLEELKKIRNFERTPVV-----SHTLTPGGNVRTVAGDTRRIAEMIADYFLDRGFRNFA 105 Query: 124 FYGLPESSGK--RWATEREYAFRQLVAEEKYRGVVYQGLETAPE----NWQHAQNRLADW 177 + + + + + R+ + +R V E ++ RLA++ Sbjct: 106 AIDARDWNRQGCIHGIDPVVSLREELERRGFRLEVCHWKEDLRPEELADYGSVLARLAEF 165 Query: 178 LQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQ 237 +P + +V L I VPE+ V+ +E + + + ++ Sbjct: 166 FSEMPRPLALFIPNGRHLTVAYRVIHQLGIRVPEEFAVLCNTDEPFFTENASIPTTHISG 225 Query: 238 GARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNH 297 ++G +A+LL R+++ E +P + VPP ++ RSTD ++++P + A+ + + Sbjct: 226 EPLKLGRMSAELLERMMNAETVPEAPVWVPPASIVSSRSTDVLAISNPKLAAAVDFFLGN 285 Query: 298 ACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEIS 357 I V+ A G+S S L + F++ + ++ + + + R L + L + EI+ Sbjct: 286 FMNFISVEDAAAAAGLSPSMLVRLFRKHLRKSPSEFLRGLRFNRIRHFLDKSDLPLPEIA 345 Query: 358 QMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSE 389 + GY S F++ Y P EYR Sbjct: 346 RRTGYGSAMSLSIAFRREYGIAPGEYRRTRRR 377 >UniRef50_C0A5R8 Transcriptional regulators-like protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A5R8_9BACT Length = 374 Score = 254 bits (648), Expect = 5e-66, Method: Composition-based stats. Identities = 93/377 (24%), Positives = 160/377 (42%), Gaps = 18/377 (4%) Query: 19 DRQVVEGVGEYLQASQSEWDIFIEEDFRARIDKIKDWLGDGVIADFDDKQIEQALADV-- 76 + G+ Y + ++ W + A K + DG+I + Sbjct: 8 APSLWHGLRAYAR--EAGWLLAAPPTLLAGPPKAPR-VFDGLII-LPTEYTAFDARKFFP 63 Query: 77 DVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRFAFYGLPESSGKRWA 136 IV + G A+ P + D+ + + A +L G F GL S K Sbjct: 64 GAKIVDILG----AKGLIPDARVIVDHKKVGQMAADYLHSLGCKSF--LGLDLKSYKYNL 117 Query: 137 TEREYAFRQLVAEEKYRGVVYQ------GLETAPENWQHAQNRLADWLQTLPPQTGIIAV 190 +R A++ + + + E + N RL L +P G+ + Sbjct: 118 RKRNAAYKAQLEALDIKQDYIKTLHYDGWGEYSAANLSILPARLKRALAGMPLPVGVFSP 177 Query: 191 TDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLL 250 A Q L VP+ + V+ DN+ ++RV LSSV ++GY+AA+LL Sbjct: 178 DGYAADVFEQGVMELGYRVPDDIAVLSTDNDRGICEMARVPLSSVDVNLSKLGYEAARLL 237 Query: 251 HRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDA 310 RL+ ++ + I++PP+ + +RRST+ S DP V M YIR H + I + ++ Sbjct: 238 DRLMAGDKNAPREIVIPPLGIEKRRSTERTSCDDPIVTAIMEYIREHFMEKITAELIIHD 297 Query: 311 VGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYS 370 + SR+N RF++ +G +I I ++E A+SLL +T ++ ++++ GY + F Sbjct: 298 IHASRTNAFVRFRKVMGRSIGEEIERVRIEHAQSLLTTTDYKVDAVARLSGYLNTSAFCR 357 Query: 371 VFKKAYDTTPKEYRDVN 387 FK TP E R Sbjct: 358 AFKACTGRTPTEVRSRR 374 >UniRef50_Q6LUY4 Putative uncharacterized protein n=1 Tax=Photobacterium profundum RepID=Q6LUY4_PHOPR Length = 367 Score = 252 bits (644), Expect = 1e-65, Method: Composition-based stats. Identities = 88/377 (23%), Positives = 157/377 (41%), Gaps = 21/377 (5%) Query: 11 LFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARIDKIKDWLGDGVIADFDDKQIE 70 + ++ +DRQV++G+ L + + +E + W D VIAD+D + Sbjct: 1 MLDSMIYFDRQVLKGIKAKLDEANVNVSLHLESGTLLEELTREHW--DYVIADYDKPHFQ 58 Query: 71 QALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRFAFYGLPES 130 Q + V V ++ + + + DN L +A + FY + Sbjct: 59 QIVQTCGAKSV-VYSNHQRDDFSEKMSSVVMDNTCLASAALRRFLDAKYTHVGFYTNEQD 117 Query: 131 SGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQTLPPQTGIIAV 190 + + W ERE AF+ L + V + + G+ Sbjct: 118 ALQPWGQEREEAFQLLTMQAGIHFVH----------------DVHQAMAARQFPFGVYCS 161 Query: 191 TDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLL 250 +D AR + Q C+ I VP+ + +IG D+++ R LS + LSS+ ++G + L Sbjct: 162 SDRSARKLAQYCQCNAIAVPKDVAIIGTDSDDTERMLSPLPLSSLDVNPYELGRFCVETL 221 Query: 251 HRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDA 310 + + + R+ P + E +T + + D V +A +IRN+ I + QV D Sbjct: 222 IKTIRFKRTL--RLRYAPETLYEAATTTHCNHVDDIVSRATLFIRNNFHLNINIKQVTDY 279 Query: 311 VGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYS 370 SR L+ RF G T H + ++ +A+ LL + ++ I+ CGYP+ Y Sbjct: 280 CRTSRKTLDTRFLAAQGITAHQYLTEVRVARAKYLLAHSQNKLDSIALQCGYPNQSYLTQ 339 Query: 371 VFKKAYDTTPKEYRDVN 387 VF K +P +YR + Sbjct: 340 VFGKQLGVSPSQYRQAS 356 >UniRef50_UPI000174567C xylose operon regulatory protein n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI000174567C Length = 419 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 82/389 (21%), Positives = 167/389 (42%), Gaps = 18/389 (4%) Query: 10 LLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEE-DFRARIDKIKDWLGDGVIADFDDKQ 68 ++F A YD + +G+ ++++ +++W++ + R +K DG++ + Sbjct: 36 VIFMALSFYDASLHDGIAQWVR--ENDWELDVSNFPVLMRPPTVK---CDGILTTITRPE 90 Query: 69 IEQALADVDVPIVG--VGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRFAFYG 126 + L D P+V + + L E+ + ++ D + HL G FAFY Sbjct: 91 TLEWLKPYDCPMVRMLIAPTPELEEASGHIPLVSADYESAGRLGAKHLLTLGQPHFAFYQ 150 Query: 127 LPESSGKRWATEREYAFRQLVAEEKYRGVV--YQGLETAPENWQH-----AQNRLADWLQ 179 F + + + V + G + + + LA ++ Sbjct: 151 RGVGPDVLAIR---DGFVETLKAAGKQVTVLNFMGDHPNLDPFTRVPRADRREWLARRIR 207 Query: 180 TLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGA 239 LP I+A D A ++ + + +P + ++G D+ L +S V++SSV Sbjct: 208 ALPKPLAIMAEDDRFAIEVMHAVRAMGLRIPTDVAILGCDDNRLALSVSPVSMSSVDTNL 267 Query: 240 RQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHAC 299 R +GY AA +L L+ +E P + I +P RV+ R ST + + V +A+ ++R H Sbjct: 268 RGVGYAAASILAGLIQGKEKPSRPIRIPSRRVLARESTATYAGSHQGVSEALRFVRQHFR 327 Query: 300 KGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQM 359 + ++ +V +S L+ ++E T++ I ++ A +L T L ++ I+ Sbjct: 328 EPLQASRVAKHARMSLRGLQSALRQEAQLTLNDEIARLRVTAASEMLEETDLKLDSIAAD 387 Query: 360 CGYPSLQYFYSVFKKAYDTTPKEYRDVNS 388 G + VF++ Y TP+++R Sbjct: 388 VGLRDAKNLCRVFRQRYGMTPQQWRARKQ 416 >UniRef50_C0A5A7 AraC-type DNA-binding domain-containing protein-like protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A5A7_9BACT Length = 388 Score = 240 bits (614), Expect = 5e-62, Method: Composition-based stats. Identities = 87/371 (23%), Positives = 157/371 (42%), Gaps = 9/371 (2%) Query: 21 QVVEGVGEYLQASQSEWDIFIEEDFRARIDKIKDWLGDGVIADF-DDKQIEQALADVDVP 79 ++ GV Y + + W + I D DGV+ +D + + Sbjct: 25 KLEYGVRAYARDAN--WVLSINRHANELPPVSPD--VDGVLLLVGEDFLFDARCYFPNAK 80 Query: 80 IVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRFAFYGLPESSGKRWATER 139 V + G Y E D+ + A +L E G +G + R Sbjct: 81 SVDLRGIY---EPRMVDGITMIDHEKVGCVAADYLYEIGRRNVLAFGGNPNLEFRAQIGS 137 Query: 140 EYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQTLPPQTGIIAVTDARARHIL 199 + + + Q E + + ++ ++ L G+ + D A + Sbjct: 138 FIKRSKAIGSKAAAIYTNQWAEGTATDHANLTEKIRRTIEELGLPLGVFSPDDMMADSFM 197 Query: 200 QVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKE-E 258 Q+ L VP ++ V+G++N+ + RV LSS+ ++GY A+LL RL+ + + Sbjct: 198 QIALGLGYSVPAQIAVLGMNNDRGFCEMCRVPLSSLDVNLSRLGYDGARLLDRLMRGQIQ 257 Query: 259 MPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNL 318 PL R++VPP+ V R+STD+ D V+ + YIR+H + + V+ +L + SR+ Sbjct: 258 EPLPRVIVPPLTVETRQSTDHTRCDDRLVVAILEYIRDHFAEHMTVEDMLRDLHTSRAVA 317 Query: 319 EKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDT 378 +RF++ +G I I ++ AR LL+ + I+ +++M GY + F FK + Sbjct: 318 YERFQKHIGHPIGEEIERVRMNYARGLLVGSDYKIDVVARMSGYQNTASFGRAFKTRFGE 377 Query: 379 TPKEYRDVNSE 389 TP R E Sbjct: 378 TPNAARRRGQE 388 >UniRef50_C0AC48 Transcriptional regulators-like protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0AC48_9BACT Length = 371 Score = 220 bits (560), Expect = 8e-56, Method: Composition-based stats. Identities = 84/373 (22%), Positives = 166/373 (44%), Gaps = 18/373 (4%) Query: 19 DRQVVEGVGEYLQASQSEWDIFIEEDFRARIDKI---KDWLGDGVIADFDDKQIEQALAD 75 R+V GV + + + D+ +++ AR+ DGV+ D + + A Sbjct: 5 GRRVWNGVVAFARDRR---DVIVQQWSLARLADPGFMAASGCDGVV-MIDGRAGDFARLP 60 Query: 76 VDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRFAFYGLPESSGKRW 135 +P V A + + D L E A + +G A+ G P Sbjct: 61 QGLPAVTTSAYLKSA----GIPRVCDDQRWLGELAAGYFTRRGFQTVAYCGYP---FHHG 113 Query: 136 ATEREYAFRQLVAEEKYRGVVYQ----GLETAPENWQHAQNRLADWLQTLPPQTGIIAVT 191 + R F + + R +VY+ E N Q RL WL+ LP ++A + Sbjct: 114 SQLRGAGFAEAAGAARARVLVYEVKGSPEEDVAFNSAREQRRLRAWLRRLPKPCALLAFS 173 Query: 192 DARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLH 251 D A ++Q+ + +PE + ++GIDN+ L + + LSS+ G+ + G +AA+++ Sbjct: 174 DTLAGLVMQLALDEGLRLPEHVALLGIDNDMLLQRALPLGLSSIEIGSEKTGKKAAEVVL 233 Query: 252 RLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAV 311 + P LV R++ R++TD D + QA+ +I H V ++ + Sbjct: 234 NWIRDGTAPAAETLVRHARLVPRQTTDRHYTEDDFIAQALDFIHEHKTSAPTVTEIAAHM 293 Query: 312 GISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSV 371 G +R +E+RF+ +G + H ++ +LE+ ++ L+ + + ++ CG+ + ++ + Sbjct: 294 GCTRRTVERRFRAALGNSAHQVMQELRLERTQAYLLESQAPLKAVALACGFSNDRHLCTA 353 Query: 372 FKKAYDTTPKEYR 384 F++ + TP +R Sbjct: 354 FRQRFGMTPGGFR 366 >UniRef50_UPI00017895AE two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI00017895AE Length = 353 Score = 193 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 62/348 (17%), Positives = 126/348 (36%), Gaps = 40/348 (11%) Query: 43 EDFRARIDKIKDWLGDGVIADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIAT- 101 ED ++ +++ D ++ D +++ G+ + ES+ +H+I Sbjct: 35 EDGVEALEMLENSRPDIIVTDICMPEMD-----------GLEFIRRVRESHAQMHFIILS 83 Query: 102 --DNYALVESAFLHLKEKGVNRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQG 159 DN+ A + GV+ F + + ER E R + Sbjct: 84 GHDNFEFARQAMRY----GVSDF-LLKPIDPAQFHATLER------ACRELDERKARFSR 132 Query: 160 LETAPENWQHAQNRLADWLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGID 219 Q + RLA+ L + + + + A + E + P+++ + Sbjct: 133 QTKWTLAQQRHKARLAELLWSAEEREALEQTHEIMA-----LFETMG---PKEVSLSRYA 184 Query: 220 NEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDY 279 + ++ LS + + Q A+ L ++ + R+ Sbjct: 185 HMLISELLSALEERGLMLNMDTGEEQWAQ--DDPLACRRQTEDKVKEMLALIKGSRNL-- 240 Query: 280 RSLTDPAVIQAMHYIRNHAC-KGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEK 338 + + +A +I + + + + +V D+VG+S + L + FK E + + Sbjct: 241 --GSRHNIQKAKRFIEENYAMEDLSLQEVADSVGMSVTYLSRTFKSETNMNFVKYLVQVR 298 Query: 339 LEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDV 386 +EKAR LL + LS E + G+ +F FKK + TP YR Sbjct: 299 MEKARELLAESELSAQEAAYRVGFSDYVHFSKTFKKFHGLTPSAYRKQ 346 >UniRef50_A8RPD4 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RPD4_9CLOT Length = 532 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 51/266 (19%), Positives = 98/266 (36%), Gaps = 8/266 (3%) Query: 125 YGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRL-ADWLQTLPP 183 G SS + E A + ++ + PEN++ L ++ + Sbjct: 271 IGSRVSSLEHLPDSLETAVKSVMLRIDLGVGNIIRYDRLPENYKKDSYPLPKEFEVKMER 330 Query: 184 QTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMG 243 Q ++A + +L E ++ V + + L L R L Sbjct: 331 QVPLLAA----GKLVLIGEEAMNRAVEGQYRYYRLYGL-LEEMLERTGLVFSDIMKDYEI 385 Query: 244 YQAAKLLHRLLDKEEMPLQRIL--VPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKG 301 A + RL + + +++ E + V YI H + Sbjct: 386 PDAEPYIRRLENCTTLNQLKLVWADYVSVSCELCQRQKDGMGSRPVRMIKEYIGEHYSEN 445 Query: 302 IKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCG 361 I ++ + D V ++ + L FK+E G+T+ + +++KA+ +L + +I EI+ M G Sbjct: 446 ITLNDIADIVFLNPAYLSAMFKKETGQTLTQYLIDVRIDKAKEMLRNPERTIGEIACMVG 505 Query: 362 YPSLQYFYSVFKKAYDTTPKEYRDVN 387 Y ++F +F K P EYR Sbjct: 506 YQDERHFSKLFSKMTGVKPTEYRRFY 531 >UniRef50_C0ET05 Putative uncharacterized protein n=2 Tax=Firmicutes RepID=C0ET05_9FIRM Length = 355 Score = 183 bits (464), Expect = 1e-44, Method: Composition-based stats. Identities = 71/370 (19%), Positives = 140/370 (37%), Gaps = 49/370 (13%) Query: 33 SQSEWDIFIEEDFRARIDKIKDWLGDGVIADFDDKQIEQALADVDVPIVG-VGGSYHLAE 91 ++ IF+EE+ + G + D K I L D+++P + + + + Sbjct: 13 ERTSMKIFLEENLLDVEIVGEAKSGFEAVEMIDSKDINLMLVDINIPGMDGMEVIKYARK 72 Query: 92 SYPPVHYIAT---DNYALVESAFLHLKEKGVNRFAFYGLPESSGKRWATEREYAFRQLVA 148 P I T D++ + A + V+ F L + K E +F + Sbjct: 73 KLPKAVIIITTAYDDFNIAHRA----IKLKVDDF----LLKPIRKEVLLESVKSFASRLG 124 Query: 149 EEKYRGVVYQGL-----ETAPENWQHAQNRLADWLQTL---PPQTGIIAVT-DARARHIL 199 E + G + L E +++ + + L +++ L II+ A+ ++ Sbjct: 125 EGRQTGKSNKLLSKFEMELKKCSYKASVDILREYIDQLYLEEHDVNIISKRLQEVAKAVV 184 Query: 200 QVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEM 259 ++ E L I D EL + ++ + + + Y Sbjct: 185 RISEELGIT----------DTNELVVQMEKLKIKYLLYNNKHDAY--------------- 219 Query: 260 PLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLE 319 ++ V ++ + L++ + + YI + KGI ++ V + V IS L Sbjct: 220 ---NEIIKMVDILFDKMNIKGKLSEGGMKAVIDYIERNLKKGISLEDVANHVNISTYYLS 276 Query: 320 KRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTT 379 K FK+E+G + K++ A+ +L++T + + I+ Y YF FKK T Sbjct: 277 KIFKKEMGVNFITYVTDRKMDLAKEMLVNTDIPVLNIALDLAYNEANYFSKAFKKKTGLT 336 Query: 380 PKEYRDVNSE 389 P EYR+ Sbjct: 337 PSEYREKYRN 346 >UniRef50_B0ABU8 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ABU8_9CLOT Length = 412 Score = 183 bits (464), Expect = 1e-44, Method: Composition-based stats. Identities = 41/174 (23%), Positives = 77/174 (44%), Gaps = 1/174 (0%) Query: 213 LCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVI 272 + +I EL LSR ++ A + + L K L ++ + Sbjct: 237 INIIKSKTLELCTLLSRASIDGGADSNTIIDLNSKFLYKISNIKNIEDLSYWVIHMLDSF 296 Query: 273 ERRSTDYRSLTDP-AVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIH 331 + ++ +P + + + YI H + I ++ + + V ++ S FK+EVG + Sbjct: 297 TQNVFNFNESKNPVLIQKCISYINEHYNEDINLETIANIVHLNPSYFSSIFKKEVGVSFS 356 Query: 332 AMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRD 385 ++ ++E+++ LL +T SI EI+ G+ YF VFK TPK+YR Sbjct: 357 NYLNKIRIEQSKLLLKNTDSSIVEIALEVGFEDQSYFSKVFKNLTKMTPKQYRQ 410 >UniRef50_Q21A44 Two component transcriptional regulator, AraC family n=2 Tax=Alphaproteobacteria RepID=Q21A44_RHOPB Length = 359 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 73/340 (21%), Positives = 122/340 (35%), Gaps = 34/340 (10%) Query: 53 KDWLGDGVIADFDDKQIEQALADVDVPIV-GVGGSYHLAESYPPVHYIATDNYALVES-- 109 + G +A D ++ L D+++PI+ G+ HL E + + T Y E Sbjct: 33 EARTGAEAVALIDSCDVDLMLVDINIPIITGLDVIRHLREGHVDTKVVVTTAYDYFEMTR 92 Query: 110 AFLHLKEKGVNRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQH 169 +HL + Y L + + E +QL A+ K R +V + E A +N Sbjct: 93 EAIHL------KVDEYLLKPVRTQALVSTLETCIQQLGADRKCRVMVARLGELADQNAYQ 146 Query: 170 AQNRLADWLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSR 229 L RH+ +C P + V L + Sbjct: 147 DGVALVR-------------------RHVEWICTQRDYPCRD---VAQNSATALLALIRA 184 Query: 230 VALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQ 289 L A ARQ+ L D+ + + + ++ + V + Sbjct: 185 KGLRVSAALARQVTELRTMSLD---DRGLQSVLGVFLGLADLLFDVREEQLDEAGSTVQK 241 Query: 290 AMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLIST 349 A++YI + K + ++ D IS L + FK+ + + ++E A+ LL T Sbjct: 242 AINYIERNLSKRVTLEDAADYAKISACYLSRMFKKTLDVNFVTYLTTRRMELAKELLAGT 301 Query: 350 TLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSE 389 SI I++ Y L YF FKK +P EYR E Sbjct: 302 ERSITNIAKEFSYNDLNYFCKSFKKEIGVSPSEYRRQARE 341 >UniRef50_UPI0001789620 two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789620 Length = 540 Score = 182 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 61/334 (18%), Positives = 119/334 (35%), Gaps = 25/334 (7%) Query: 69 IEQALADVDVPIV----GVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVN-RFA 123 + + L ++ V S L P + D A E+ + R + Sbjct: 214 LREVLDQLNPDAVHVLYDAKSSLLLFAYRPGLGSNIYDEAAACLKEVQRTLERVLRIRMS 273 Query: 124 FY---------GLPESSGKRWATEREYAFRQLVAEEKYRGVVYQ-GLETAPENWQHAQNR 173 F GL + A+ + + + + K G + Q L P+ + + Sbjct: 274 FLIGRGCADPEGLKAGLNELLASRHQRFYLEPLEISKLNGALEQKSLHGDPDLFVYYDRA 333 Query: 174 LADWLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALS 233 ++ ++L + G A D R I + PE + + + + L + L Sbjct: 334 SSELRESLLGKEGSGAARDTVDRWISWI--QGKRYAPESV------KDWVLKLLLDLKLR 385 Query: 234 SVAQGARQMGYQAAKLLHRLLDKEEMPL--QRILVPPVRVIERRSTDYRSLTDPAVIQAM 291 + Y A L ++D + + + ++ + V +A Sbjct: 386 LHLLHSLSPAYTADALHKEIMDMDSLNELKSWLHDYLESTMQAMDRGFGGSRRSEVAEAC 445 Query: 292 HYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTL 351 Y+ + I +D V + ++ S + FK+E G T + K+E+A+ LL T Sbjct: 446 KYVSLRLDQRITLDDVAGCLHLNPSYFSRMFKKETGVTFIEYVTRMKMERAKELLRQTDR 505 Query: 352 SINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRD 385 ++ EI + Y ++ YF FK TP E+R+ Sbjct: 506 TVGEICESLAYDNVSYFSKTFKAYAGVTPVEFRN 539 >UniRef50_UPI00016C020E hypothetical protein Epulo_10707 n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C020E Length = 420 Score = 178 bits (452), Expect = 3e-43, Method: Composition-based stats. Identities = 54/261 (20%), Positives = 115/261 (44%), Gaps = 23/261 (8%) Query: 129 ESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQTLPPQTGII 188 + +R +R+ + + + E+KY ++ + P + +L + +++ Sbjct: 177 KERNERALQQRKIS--ETLQEKKY---LHNADYSYP---FEKEKKLVEAVKSGQTADAAA 228 Query: 189 AVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAK 248 + D +L L+I I EL +SRVAL S + + A Sbjct: 229 ILNDLLGHVLLSNANDLNI--------IKARVLELCTIISRVALESTKRIENTLSLNAV- 279 Query: 249 LLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPA----VIQAMHYIRNHACKGIKV 304 L+ L+ E L+ + +VI+ + + L + A + + ++YI + + I + Sbjct: 280 FLNELM--ESKSLEDLAFALHKVIKEFTDEILELNNTALFVPIRKVINYINTYYAEEISL 337 Query: 305 DQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPS 364 +V V ++ S FK+E G + ++ ++E + LL+ T++++ E++ G+ + Sbjct: 338 HKVAKLVHLTPSYFSTVFKKETGYSFTQYLNKVRIEHGKLLLMDTSMTVLEVAIEVGFDT 397 Query: 365 LQYFYSVFKKAYDTTPKEYRD 385 YF +VFKK TP ++R Sbjct: 398 DTYFCTVFKKVVGVTPNQFRK 418 >UniRef50_C6IWJ3 Response regulator n=2 Tax=Bacillales RepID=C6IWJ3_9BACL Length = 539 Score = 177 bits (448), Expect = 8e-43, Method: Composition-based stats. Identities = 53/270 (19%), Positives = 90/270 (33%), Gaps = 22/270 (8%) Query: 125 YGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQN----------RL 174 G + + E AFR + R Y E L Sbjct: 277 IGGVKPQWQHIPDSTEEAFRAIDMRLGRRDSTYALYAYQDEEDGKTAAASLFSVKFYVEL 336 Query: 175 ADWLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGID--NEELTRYLSRVAL 232 A L+ V D R LQ PE + + + L Sbjct: 337 ASALKASQEADAKKLVADYMNRLELQKAM-----TPETVQIFACELWGVFTYCLYETGVL 391 Query: 233 SSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMH 292 + Q+ + L E + + + R S V Sbjct: 392 LNDLVPEEQITKELVG-----LTGLEQLTEWLSDKITLICSSRQWRGNSKHRQVVDYMTG 446 Query: 293 YIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLS 352 YI H + I + ++ + + ISR++L FK GET + + ++EKAR LL+ + Sbjct: 447 YIHEHYAEDITLAELSEKLYISRNHLSIIFKNITGETFNNYLTRVRIEKARELLLQRNML 506 Query: 353 INEISQMCGYPSLQYFYSVFKKAYDTTPKE 382 + E+++ GY ++ YF ++FKK +P + Sbjct: 507 VYEVAEQVGYKNVPYFSTLFKKITGMSPTD 536 >UniRef50_UPI0001788A43 two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788A43 Length = 516 Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats. Identities = 59/266 (22%), Positives = 108/266 (40%), Gaps = 14/266 (5%) Query: 130 SSGKRWATEREYAFRQLVAEEK----YRGVVYQGLETAPENWQHAQNRLADWLQTL--PP 183 S + + AFR+ + + E P AQ R A L L Sbjct: 259 SRRYNSMDKLQEAFREAAESLEGLFFHPDQQILRAEELPLTADSAQERPAAELHALRAAL 318 Query: 184 QTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMG 243 G + ++ R + I+Q + P V+ E LS +A+ + G Sbjct: 319 TVGNMDISQERLQSIMQSWRPGRMKKP---AVL----REAEELLSLLAMFHLPGGPPLPQ 371 Query: 244 YQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIK 303 + L + + +++ LQ R +L + V+QA+ YI+ + I Sbjct: 372 IREVGKLRSVEEVKKLVLQG-FHALREEAMRHPVPESTLHERIVLQAVRYIKARFTEPIS 430 Query: 304 VDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYP 363 + +V D V +SR+ + FK G + +L++A+ LL +T+L + E++ G+ Sbjct: 431 LQEVADEVAVSRNYFSELFKRVTGHNFIDYVIDLRLKRAKELLSTTSLRVYEVADRSGFN 490 Query: 364 SLQYFYSVFKKAYDTTPKEYRDVNSE 389 ++YF +FKK TP EY+ + + Sbjct: 491 DVKYFSKLFKKMVGMTPAEYQGQHRK 516 >UniRef50_Q2RGN4 Two component transcriptional regulator, AraC family n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RGN4_MOOTA Length = 548 Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats. Identities = 59/257 (22%), Positives = 101/257 (39%), Gaps = 14/257 (5%) Query: 138 EREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQTLPPQT---GI-IAVTDA 193 E ++ + VA ++R + Y G + + A+ +L Q I + A Sbjct: 286 ELARSYAEAVAAAEFR-LFYGGDQVIHADDVIARPSAGQFLPAPEEQELTQAIRMGDRQA 344 Query: 194 RARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKL---- 249 R + L + ++ ++ + EL +R AL A A Sbjct: 345 AYRQAKNILMQLLLEQEKRPAILKMKLLELNTLAARAALEGGADPEAVSDLALASSTEFL 404 Query: 250 -LHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVL 308 L L D E L+R++ +V E R + +A YI + + + +++V Sbjct: 405 TLDNLADMRERILERLMALVAQVAETREQR----NSSLIDRASKYIEANFSQDLTLEEVA 460 Query: 309 DAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYF 368 V +S K FK+ G + +L+ AR LL++T L + EI+ GY +YF Sbjct: 461 RQVYLSPCYFSKLFKQFKGLNFIDYLTKVRLKAARELLLNTKLPVAEIATRVGYRDARYF 520 Query: 369 YSVFKKAYDTTPKEYRD 385 VFKK TP +R Sbjct: 521 GQVFKKQEGYTPSVFRK 537 >UniRef50_B0K3C5 Response regulator receiver protein n=4 Tax=Thermoanaerobacter RepID=B0K3C5_THEPX Length = 530 Score = 176 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 43/237 (18%), Positives = 92/237 (38%), Gaps = 5/237 (2%) Query: 150 EKYRGVVYQGLETAPENWQHAQNRLADWLQTLPPQTGIIAVTDARARHILQVCEHLHIPV 209 +K V+ N + Q + ++LQ Q + + + IL ++ + Sbjct: 295 KKEDIEVFLKPHFVSLNTKRKQEEMIEFLQLGDSQKALQLLKEVVG-EILTTTKNNLLEC 353 Query: 210 PEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPV 269 L I + + + + R + + L + + + + Sbjct: 354 QINLIEIMMRIVKTISEVGMLTGEEG----RVFQFCFSHLQKLMRTQNYRGITLWATSFL 409 Query: 270 RVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGET 329 I + + V + + YI + K I++ ++ + ++ + FK+EVG T Sbjct: 410 EEISDLFAGAKRNENNIVERVVKYINENFEKEIRLKELSQTIYLNPEYFSRLFKKEVGCT 469 Query: 330 IHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDV 386 + ++E A+ L + +L+I+EI++ GY YF VFKK +P E+R + Sbjct: 470 YAEYLTRIRIEAAKKYLANPSLTISEIARKVGYQDANYFSKVFKKVVGISPSEFRKL 526 >UniRef50_C6D5X4 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D5X4_PAESJ Length = 533 Score = 175 bits (444), Expect = 3e-42, Method: Composition-based stats. Identities = 58/335 (17%), Positives = 115/335 (34%), Gaps = 35/335 (10%) Query: 69 IEQALADVDVPIVGVGGSYH----LAESYPPVHYIATDNYALVESAFLHLKEKGVN-RFA 123 +E+ L ++ + +V +G S L P + D + + + A Sbjct: 214 MEELLIELPLRVVHIGYSSRQSLLLFAFKPGLKQNVYDQVQASLQTVQRTLGQVLKIQMA 273 Query: 124 FYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQTLPP 183 F + + + L+ + + ++ A W + Sbjct: 274 FLIGTGCDNPQLLKQ----------------ALCNLLKADEQRFYLSKGETAKWQKGAQH 317 Query: 184 QTGIIAVTDARARHILQVCEHLHI------------PVPEKLCVIGIDNEELTRYLSRVA 231 +G++A+ D A I + + ++ + + + L + Sbjct: 318 SSGLLAMYDQAAAEIREAIMAKDSDKVRTLAGKWETHIRKEQYASEEVRDWVLKLLIDMR 377 Query: 232 LSSVAQGARQMGYQAAKLLHRLLDKEEM--PLQRILVPPVRVIERRSTDYRSLTDPAVIQ 289 L A A KL ++ + + + I R V + Sbjct: 378 LKLHAMLFASQTLTAEKLHKEIVYFDSLWGLFEWFHTQLQSYIAAREEALPVSKRREVSE 437 Query: 290 AMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLIST 349 A Y+ + K I +++V + ++ S + FK+E G T + +K+E+A+ LL T Sbjct: 438 ARKYVSMNLGKRISLEEVAAHLHMNPSYFSRFFKKETGLTFIEYVTDQKIERAKELLDQT 497 Query: 350 TLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 ++EI +M GY + YF FK TP EYR Sbjct: 498 NYYVSEICEMLGYDNQSYFIKTFKAQTGLTPTEYR 532 >UniRef50_C6IWJ9 Transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IWJ9_9BACL Length = 284 Score = 175 bits (444), Expect = 3e-42, Method: Composition-based stats. Identities = 44/193 (22%), Positives = 81/193 (41%), Gaps = 13/193 (6%) Query: 210 PEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEE------MPLQR 263 P IG + E++ LSR L+ + + +L L + EE + LQ Sbjct: 87 PWTYSWIGFNGEQVAEILSRTRLTPASPVLPMDTHLMPQLYELLNEAEESNTTRDLRLQT 146 Query: 264 ILVPPVRVIERR-------STDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRS 316 +L + ++ + D + + + ++ +H + + V Q+ VG+ R Sbjct: 147 LLYEFMTLLVELVPASGDADSTRTQAKDAYIHRCLDFLHSHYSEEMSVGQLAAIVGLDRK 206 Query: 317 NLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAY 376 L FK G + ++EKA +LL + SI E+++ GY F +FKK Sbjct: 207 YLSSLFKRATGMPPQQYLLKYRMEKACALLRNGHYSIAEVARSVGYQDALLFSKMFKKTV 266 Query: 377 DTTPKEYRDVNSE 389 T+P +YR+ + Sbjct: 267 GTSPSDYREQWQK 279 >UniRef50_UPI0001B9ECE6 two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001B9ECE6 Length = 519 Score = 175 bits (443), Expect = 3e-42, Method: Composition-based stats. Identities = 63/269 (23%), Positives = 106/269 (39%), Gaps = 29/269 (10%) Query: 121 RFAFYGLPESSGKRW--ATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWL 178 A E+S W +ER + + R V + +L+ L Sbjct: 270 HIALATAVEASSYEWLLQSERHIRYEDIEGRTGIRTVC----------SMEEETKLSSLL 319 Query: 179 QTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKL-CVIGIDNEELTRYLSRVALSSVAQ 237 ++ A A +L+ + P + + R+L R A S Sbjct: 320 RSGES-----ADLQAWVADLLRRIQSQGQATPGSVQAYLHSLIVSAQRWLIRAATS---- 370 Query: 238 GARQMGYQAAKLLHRLLDKEEM--PLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIR 295 +GY + + D E+ +++LV + +I + D S T P V +A+ +I Sbjct: 371 ----IGYTSPVKVEETYDIRELTKNPEKVLVDSLGLIMKEYRDMVSTTSP-VQRAISFIH 425 Query: 296 NHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINE 355 H + + + QV V ++ + + FK+E G+ + KL KA LL T I+E Sbjct: 426 EHLGQSLSLQQVAKHVHMNPNYFSEMFKKETGQNYIEFVTQAKLRKAMHLLRETPAKISE 485 Query: 356 ISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 I+ GY ++YF +FKK TP EYR Sbjct: 486 IANEIGYEDIKYFNRLFKKWTGLTPSEYR 514 >UniRef50_C5D8H7 Two component transcriptional regulator, AraC family n=3 Tax=Geobacillus RepID=C5D8H7_GEOSW Length = 515 Score = 174 bits (442), Expect = 4e-42, Method: Composition-based stats. Identities = 39/166 (23%), Positives = 62/166 (37%), Gaps = 7/166 (4%) Query: 221 EELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYR 280 EE L R+ R + + L L LQ ++ Sbjct: 352 EETFILLGRMLTDFGISYERTTTFHSCGSLEELKRTATEQLQHMVHYI-------QAWRH 404 Query: 281 SLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLE 340 + + +A YI H + +++V + VGIS K FK+ G T + ++ Sbjct: 405 QQANGKIGKAKDYIDEHYHHPLTLEEVAEYVGISPYYFSKLFKDRFGMTFIDYVTEVRIA 464 Query: 341 KARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDV 386 +A+ + S+ EI + GY YF VFKK +P EYR Sbjct: 465 RAKKEMADPNKSLKEICFLVGYNDPNYFSRVFKKHTGMSPTEYRKK 510 >UniRef50_D1PMJ1 Transcriptional regulator, AraC family n=2 Tax=Ruminococcaceae RepID=D1PMJ1_9FIRM Length = 285 Score = 173 bits (440), Expect = 7e-42, Method: Composition-based stats. Identities = 43/185 (23%), Positives = 80/185 (43%), Gaps = 11/185 (5%) Query: 210 PEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKL-LHRLL-------DKEEMPL 261 P + +G + + + + S + QA + L+ + E + Sbjct: 87 PWEYYWVGFNGACANKLVQQTPFSDLHPVHHCKDPQAVREALYNIYLSRGPEPQCEALMT 146 Query: 262 QRILVPPVRVIERRST---DYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNL 318 + + +++ + S + V+ A+ YI+ + I VD + AVG+SRS+L Sbjct: 147 GYLYIFMAHLMKEARDAMPNVGSSSSQYVLSAIKYIQFNYSHDISVDDIAKAVGVSRSHL 206 Query: 319 EKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDT 378 + F VG++ + ++ +A SLL ++ LSI EI+ G+ YF VFKK Sbjct: 207 YRVFMANVGQSPIDYLTNYRISEACSLLKNSNLSIAEIAVSVGFFDQFYFSRVFKKVKGV 266 Query: 379 TPKEY 383 P +Y Sbjct: 267 PPSKY 271 >UniRef50_A6NS86 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NS86_9BACE Length = 425 Score = 173 bits (440), Expect = 7e-42, Method: Composition-based stats. Identities = 54/241 (22%), Positives = 99/241 (41%), Gaps = 10/241 (4%) Query: 152 YRGVVYQGLETAPENWQHAQNRLADWLQTLPPQTGIIAVTDARARHIL-QVCEHLHIPVP 210 Q L+ A E+ ++ ++ + ++ + AR +L ++ E++ Sbjct: 180 EECTHIQPLKAAGESGRYPMDKERELVR------AVKEGDQTTARQLLRELLEYIQSATG 233 Query: 211 EKLCVIGIDNEELTRYLSRVALSSV--AQGARQMGYQAAKLLHRLLDKEEMPLQRILVPP 268 E C++ EL LSR A+ M + L EE+ L + Sbjct: 234 EDFCLMRSRALELMAVLSRAAVDGGGDQDTILDMNSRCFSESDHLRTAEELALWLTRMTD 293 Query: 269 VRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGE 328 S D + +A+ Y++ + + ++ VG+S S + FKEEVGE Sbjct: 294 RFTDTVFSLVEVKHRD-IICKAIEYLKRNCRDRVTLEDTAGHVGLSPSYFSRVFKEEVGE 352 Query: 329 TIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNS 388 + ++ + A ++ + R++L+ T SI EI CG+ YF VF+K TP +R Sbjct: 353 SFNSYLTALRISRGRAMLLDTDASIAEICDRCGFDDQSYFTKVFRKYTGVTPGRFRARRG 412 Query: 389 E 389 Sbjct: 413 R 413 >UniRef50_C9RVZ3 Two component transcriptional regulator, AraC family n=4 Tax=Geobacillus RepID=C9RVZ3_GEOSY Length = 513 Score = 173 bits (440), Expect = 8e-42, Method: Composition-based stats. Identities = 73/400 (18%), Positives = 130/400 (32%), Gaps = 54/400 (13%) Query: 19 DRQVVEGVGEYLQASQSEWDIFIEEDFRARIDKIKDWLGDGVIADFDDKQIEQALADVDV 78 RQ+ E + +SEW + + + + + W ++ + + D Sbjct: 132 SRQLEEQIRRLQTLVESEWLSVLMTEDVSADEW-ERWK--ELLPFSIASGMFLVIQFPDA 188 Query: 79 PIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRFAFYGLPESSGKRW--- 135 + S+ + Y + A L F+ P W Sbjct: 189 GVADEWKSWLDKQLSGKAPT----RYWIGRMANRRLP------VLFFRSPNDGEPAWKPT 238 Query: 136 ----ATEREYAFRQLVAEEKYRGVV--YQGLETAPENWQHAQNRLADWLQTLPPQTGIIA 189 A + F Y G+ + L+ ++ A + + Q G + Sbjct: 239 VQALALDLARQFSARYGAALYIGLGSPFSRLDQLRSSYYEALSAAHYYADRQKAQVGFLP 298 Query: 190 VTDARA-------RHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQM 242 RA + + + I E+ +IG+ Y+ +A S A + Sbjct: 299 AEATRAGGEAERDKQLFEALRLGDI---EQARMIGL------TYIEELASSHSLPAAGRK 349 Query: 243 GYQAAKLLHRLLDKEEMPLQRI----------------LVPPVRVIERRSTDYRSLTDPA 286 + L RLL + + +R+ L R+ + Sbjct: 350 AEETFVWLGRLLSELGIRYERLASFASCRSAAELKRAALDELDRIAADLEVWRQQQAYGK 409 Query: 287 VIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLL 346 + +A YI H + + +++V + GIS K FKE G T + ++E+A+ L Sbjct: 410 LGKAKDYIDRHYAEPLTLEEVAEQAGISPYYFSKLFKEHFGITFIDYVTNVRIERAKEAL 469 Query: 347 ISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDV 386 T S+ EI GY YF VFKK +P EYR Sbjct: 470 AETDQSLKEICFSVGYNDPNYFSRVFKKQTGLSPSEYRKK 509 >UniRef50_C7G788 Transcriptional regulator, AraC family n=2 Tax=Bacteria RepID=C7G788_9FIRM Length = 292 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 43/184 (23%), Positives = 76/184 (41%), Gaps = 7/184 (3%) Query: 210 PEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQ------- 262 P +L I + E Y + + + ++ E P Sbjct: 108 PWELLWIHFNGPEARAYYTYFRDHHNWHFRSAHFTELINAIESIIRYNEEPTDDTDLLTA 167 Query: 263 RILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRF 322 + ++ + +I S + L + +HY+ H + I +DQ+ + IS+ L + F Sbjct: 168 QQIIHILTLICTESNEKNELLSDKLKTILHYLDEHYTENISLDQLAEQFFISKYYLSREF 227 Query: 323 KEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKE 382 K+E G T+ + A+++ A+ LL + SI EI+ +CG YF VF+K T E Sbjct: 228 KKEFGTTVIQYVLAKRINNAKELLRYSNSSIEEIAHLCGIDDASYFNKVFRKMEGCTASE 287 Query: 383 YRDV 386 YR Sbjct: 288 YRKR 291 >UniRef50_A4XHB8 Two component transcriptional regulator, AraC family n=2 Tax=Clostridia RepID=A4XHB8_CALS8 Length = 546 Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 38/157 (24%), Positives = 75/157 (47%), Gaps = 3/157 (1%) Query: 232 LSSVAQGARQMGYQAAKLLHRLLDKEEMPLQR--ILVPPVRVIERRSTDYRSLTDPAVIQ 289 LSS +Q ++ Q + L +L + + + + + IE +S + + Sbjct: 379 LSSSSQYEQEDKLQDIEFLSEILKCKSISELNGVLKMSIQKTIEEVQKHNQSKMGSLIKK 438 Query: 290 AMHYIRNHAC-KGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLIS 348 + YI+ + I + ++ + +S S L + FK+E G+ + I+ ++EKA+ LL + Sbjct: 439 VIEYIKANYSYNEISLSEISEKFFVSPSYLSRLFKKETGKNLSDFINEYRIEKAKELLAT 498 Query: 349 TTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRD 385 T L E++ G P YF +FK+ +P EY++ Sbjct: 499 TDLKTYEVADKVGIPDPHYFSRIFKRYTGYSPSEYKE 535 >UniRef50_C6LLM9 Two-component response regulator n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LLM9_9FIRM Length = 516 Score = 172 bits (435), Expect = 3e-41, Method: Composition-based stats. Identities = 53/274 (19%), Positives = 104/274 (37%), Gaps = 38/274 (13%) Query: 119 VNRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWL 178 +FY + +RW+ E F + + + LE + A+ +L + Sbjct: 264 CQGMSFYRTKKQQIQRWSGEEMVPFTIDLLQNHVESELCALLEQRKA--EEAEEKLRGQM 321 Query: 179 QTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVA-- 236 AR ++ +P+ + + L R+A++ + Sbjct: 322 T-------------WCARKMI---------IPQDVA-------RYFQGLLRLAIAQMRTD 352 Query: 237 ----QGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMH 292 + + ++ EE+ L+++ V + + + V + Sbjct: 353 GFLPPVLDDILNEQIFSVNDCSSSEEL-LEKVKVILQELTREDQRTGETGSSRIVQEIKR 411 Query: 293 YIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLS 352 YI+ H + I ++ + D V +S L FK E GE + + ++E A+ L+ L Sbjct: 412 YIQEHYAENINLNALADQVYLSPKYLSDLFKRETGENYTSYLLYVRMEHAKKYLMQFDLK 471 Query: 353 INEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDV 386 I E++++ GY S + F VFKK TP EYR+ Sbjct: 472 IYEVAELTGYASPKQFIRVFKKEVGVTPGEYRNQ 505 >UniRef50_C3WEF1 Putative uncharacterized protein n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WEF1_FUSMR Length = 285 Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats. Identities = 52/200 (26%), Positives = 87/200 (43%), Gaps = 11/200 (5%) Query: 201 VCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGY-QAAKLLHRLLD---- 255 P K IG D E +YL + + R + LL +L Sbjct: 71 TFYQADAKNPWKYFWIGFDGEGAEKYLRELGIIQHKPIFRTDKLDELFSLLKEMLKRKNL 130 Query: 256 --KEEMPLQRILVPPVRVIERRST----DYRSLTDPAVIQAMHYIRNHACKGIKVDQVLD 309 EE+ LQ + +I ++ D ++ +P V + + YI+N+ I V+ +++ Sbjct: 131 TLAEELKLQGLFYEFFSLIVEENSIEEKDEKNELNPYVDKIITYIKNNYWDDINVNNIIE 190 Query: 310 AVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFY 369 VG++RS L FK+ +G TI + +L +A LL T SI ++ CGY F Sbjct: 191 YVGLNRSYLSTLFKKNMGITIQEYLTVFRLSRANELLDITNESIENVANSCGYKDPLVFT 250 Query: 370 SVFKKAYDTTPKEYRDVNSE 389 +KK Y TP ++R + + Sbjct: 251 KAYKKKYGVTPTQHRKKDRK 270 >UniRef50_C6D4A8 Two component transcriptional regulator, AraC family n=2 Tax=Bacillales RepID=C6D4A8_PAESJ Length = 504 Score = 171 bits (433), Expect = 4e-41, Method: Composition-based stats. Identities = 67/296 (22%), Positives = 108/296 (36%), Gaps = 23/296 (7%) Query: 102 DNYALVESAFLHLKEK--GVNR--FAFYGLPESSGKRWATEREY--AFRQLVAEEKYRGV 155 D+ V + L ++ G + F G+ S + RE AF+Q RG Sbjct: 217 DHANTVRDLAVTLLQRLPGFTKAKIGFSGVFSGSSRLGQAYREASAAFQQAWYNSVLRGC 276 Query: 156 VYQGLETAPENWQHAQNRLADWLQTLPPQTGIIAVTDARARHIL--QVCEHLHIPVPEKL 213 +TA + ++ R+ D + LP + A A + E Sbjct: 277 SGVSNQTAHKEERYRLLRIIDK-EVLP---ALQVCDFAMASRAFENWLTECAKYRFHW-- 330 Query: 214 CVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIE 273 D V +S + +++ E + +R Sbjct: 331 -----DELREVCSDMHVLISEEIKQRLDRQLTVGGEPSKMIAPESFEDWQAFAAQLRADM 385 Query: 274 RRSTDYRSL---TDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETI 330 + AV Y++ H + I++ ++ D V ++ S L K FK E GETI Sbjct: 386 SDRFHKLEQGRSENKAVDTIKAYLQKHYTEEIELQRLADLVYLTPSYLSKLFKTETGETI 445 Query: 331 HAMIHAEKLEKARSLLISTT-LSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRD 385 + +E++E+A+ LL L + +M GY YF VFKK TPKEYRD Sbjct: 446 TDYLTSERIEQAKRLLRDGHGLKTYMVGEMVGYADPAYFTKVFKKMTGKTPKEYRD 501 >UniRef50_C6LLK3 Putative two-component response regulator n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LLK3_9FIRM Length = 531 Score = 171 bits (433), Expect = 5e-41, Method: Composition-based stats. Identities = 41/141 (29%), Positives = 63/141 (44%), Gaps = 2/141 (1%) Query: 249 LLHRLLDKEEMPLQR--ILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQ 306 L ++ E+ R L ++ ++ V +A Y++ + + I +D Sbjct: 389 YLDTVMALEDYEDIRTWFLEKMMQTCCSIRDKNEDRSESLVEKARSYMQENYSREISLDD 448 Query: 307 VLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQ 366 V V +S K FKEE GE + ++ KA+ LL + LSI EI M GY Sbjct: 449 VSKEVNVSPYYFSKIFKEESGENFTEYLTNIRIGKAKELLENPELSIKEIGVMSGYTDPN 508 Query: 367 YFYSVFKKAYDTTPKEYRDVN 387 YF +FKK TP+EYR+ Sbjct: 509 YFSRIFKKHTGITPREYRERY 529 >UniRef50_Q65NG7 Putative uncharacterized protein n=1 Tax=Bacillus licheniformis ATCC 14580 RepID=Q65NG7_BACLD Length = 400 Score = 171 bits (433), Expect = 5e-41, Method: Composition-based stats. Identities = 72/413 (17%), Positives = 162/413 (39%), Gaps = 47/413 (11%) Query: 2 FTKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARIDKIKDWLGDGVI 61 ++ R+ L ++ + R+ G+ + + + + + E + ++ G Sbjct: 1 MSECWRV--LIADDEPWIRE---GIRDAVSWERYQMSVSAEAENGEEAFELALKHG---- 51 Query: 62 ADFDDKQIEQALADVDVPIVG-VGGSYHLAESYPPVHYIAT---DNYALVESAF-----L 112 I+ + D+++PIV + L + P ++ D +A + A Sbjct: 52 -------IDLLIVDLNMPIVNGIALMKKLRGALPQCRFVIVTGYDQFAYAQEAIRLNVDD 104 Query: 113 HLK--------EKGVNRFAFYGLPESSGKRWATEREYAFRQLVAEEKY-RGVVYQGLETA 163 +L E+ + + + ++ K+ +E++ A + + + V++ Sbjct: 105 YLLKPVDPAHLEQVLKKI---SVSLAAEKKKLSEQKLAEQHIQQNLGLLKEHVFRSWIEN 161 Query: 164 PENWQHAQNRLA--DWLQTLPPQTGIIAV-----TDARARHILQVCEHLHIPVPEKLCVI 216 + + +L P G+IA + A ++ + E I +K + Sbjct: 162 RADEEDVYRQLECLRLPARNPETLGVIAAGHVWNKPSEADNLKEKVERFFINERDK--AV 219 Query: 217 GIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRS 276 D + L +++ Q A +A + ++ P R+ Sbjct: 220 FFDGDRLIAACLWRSVTEAEQRALAEMIKAELQASAAVCFAKLAENGRSAPQCYQHCRQQ 279 Query: 277 TDYRSLTDPAVIQAMHYIRNHACK-GIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIH 335 P VI+A Y++ H + + Q+ DA+ +S L + K+E+G T ++ Sbjct: 280 VSKAFNISPVVIRAKEYMQKHFTEREFSLKQMADALQVSSVYLSRMMKKELGVTFVQLLT 339 Query: 336 AEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNS 388 ++++A LL +T LSI++I++ GY + YF +VFKK +P +YR ++ Sbjct: 340 EMRMDQAVHLLETTPLSIHDIAEQTGYDTQHYFSTVFKKTMGVSPNQYRRMSG 392 >UniRef50_A9U7E9 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U7E9_PHYPA Length = 399 Score = 170 bits (432), Expect = 6e-41, Method: Composition-based stats. Identities = 65/271 (23%), Positives = 109/271 (40%), Gaps = 21/271 (7%) Query: 126 GLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQN----RLADWLQTL 181 GL + A E AF Q +AE + + + E R + Q + Sbjct: 137 GLRKDDWTAIADSTEEAF-QALAERREPDANHPCVYVYTEAGFRHPAARNVRPVRFFQEM 195 Query: 182 PPQTGIIAVTDARARHILQVCEHLHIPV----PEKLCVIGIDNEELTRYLSRVALSSVAQ 237 + + RA L+ V P +L +G T+ ++ ++ + Sbjct: 196 --ADAVRTFDEPRALLALEDFASSDSGVAQLSPGELAALG------TQLIAILSFTLYDS 247 Query: 238 GARQMGYQAAKLLHRLLDKEEMPLQR--ILVPPVRVIERRSTDYRSLTDPA-VIQAMHYI 294 G + L + L E Q + V+ I RR T +L V + YI Sbjct: 248 GHKLDDELPPADLSKELGLIENAQQWKAWVAEKVKRICRRFTPNENLKHKETVEFIIQYI 307 Query: 295 RNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSIN 354 H + I + V D V IS++ L F++ GET + ++EKA+S+++ L I Sbjct: 308 HEHYAENIHLQDVADQVYISKNYLSTLFRQFTGETFGDYLTRVRMEKAKSMVLEKKLLIA 367 Query: 355 EISQMCGYPSLQYFYSVFKKAYDTTPKE-YR 384 EI++ GY ++ YF ++FKK +P E YR Sbjct: 368 EIAERVGYRNVPYFTTLFKKHTGRSPTEFYR 398 >UniRef50_C6JEP4 Two component transcriptional regulator n=3 Tax=Clostridiales RepID=C6JEP4_9FIRM Length = 531 Score = 170 bits (432), Expect = 7e-41, Method: Composition-based stats. Identities = 49/258 (18%), Positives = 83/258 (32%), Gaps = 23/258 (8%) Query: 140 EYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQTLPPQTGIIAVTDARARHIL 199 + +F++ V + +E P ++ D + I+ A A + Sbjct: 284 KESFKEAVVALRESISHVVHIEDVPAAQKYDGEYPRDLEIRYQKR--ILEKDAAGAMNCA 341 Query: 200 QVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGY---------QAAKLL 250 + + + L V R+ + + Sbjct: 342 EGFFE----------WMHSQQTVTREDIEIKILEMVMNAERRAFFAGTLKYNVNSRRSYI 391 Query: 251 HRLLDKE--EMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVL 308 L E + L + + + +A YI + + I +D V Sbjct: 392 RELQSCTDIENLKKWFLDKTREICTKLENSKEKEAGSIIDRAKEYINENFRRDISLDDVS 451 Query: 309 DAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYF 368 V IS K FK+E G+ + +L+ AR LL + LSI EI GY YF Sbjct: 452 REVDISPYYFSKLFKQETGKNFIEYLTEIRLKNARELLQDSRLSIKEICAQSGYSDPNYF 511 Query: 369 YSVFKKAYDTTPKEYRDV 386 +FKK TP E+R+ Sbjct: 512 SRIFKKYEGVTPSEFRER 529 >UniRef50_A0Q2M6 Transcriptional regulatory protein n=6 Tax=Clostridium RepID=A0Q2M6_CLONN Length = 246 Score = 170 bits (432), Expect = 7e-41, Method: Composition-based stats. Identities = 41/138 (29%), Positives = 66/138 (47%) Query: 251 HRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDA 310 + L + IL ++ ++R + + + YI + I + V D Sbjct: 108 YLLKPIRPQKIVDILNEFIKDNKKRIEESNKNCTEEFQEVVEYIDKNFKNDITLKDVADH 167 Query: 311 VGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYS 370 V S S L K FK+E+G + I +++KA+ +LI++ +SINEI+ GY YF Sbjct: 168 VNFSSSYLSKLFKKEMGINFNRYITKIRIDKAKEILINSNISINEIAFSVGYNEPNYFCK 227 Query: 371 VFKKAYDTTPKEYRDVNS 388 VFKK + TP EYR + Sbjct: 228 VFKKIVNMTPSEYRTNSR 245 >UniRef50_A8RW54 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RW54_9CLOT Length = 517 Score = 170 bits (431), Expect = 7e-41, Method: Composition-based stats. Identities = 53/259 (20%), Positives = 99/259 (38%), Gaps = 17/259 (6%) Query: 137 TEREYAFRQLVAEEKYRGVVYQGL---ETAPENWQHAQNRLADWLQTLPP------QTGI 187 E A+RQ + +YR + L T E Q + + DW + L + I Sbjct: 266 RELSAAYRQSLEAVEYRFFTDRSLICYSTVREEIQSSFKDMPDWNRYLEKSMKHGGECEI 325 Query: 188 IAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAA 247 TD ++ Q + + + + I ++ R + + Sbjct: 326 KTFTDDFLSYVYQA-KPSPVIIRTAVSAILLETIRTLRTAGGKPEDLFLSVSDTITAVLN 384 Query: 248 KLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACK-GIKVDQ 306 + L+ ++ L+ IL+ I R + V +A YI + +++D Sbjct: 385 ESNPALMARK---LREILLSASVYISRLEKLRP---NSVVQKARKYIEENYWNPDLRLDD 438 Query: 307 VLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQ 366 V V I+ S F +E+G + + ++EKA LL +T + I EI+ + GY + Sbjct: 439 VAGYVYINASYFSSVFSKEMGISFGDYLTKVRIEKAMDLLKNTHMKIYEIADLVGYQNPS 498 Query: 367 YFYSVFKKAYDTTPKEYRD 385 +F FK+ P ++R Sbjct: 499 WFNVAFKRYTGQKPGDFRK 517 >UniRef50_C5RH22 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RH22_CLOCL Length = 278 Score = 170 bits (430), Expect = 9e-41, Method: Composition-based stats. Identities = 44/194 (22%), Positives = 71/194 (36%), Gaps = 10/194 (5%) Query: 201 VCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMP 260 P IG + YL L+ + ++++ Sbjct: 79 TFYEADENEPWTYVWIGFRGIKAAAYLESANLNMNNLIFNCTSEILKEYFFKIMNANLYS 138 Query: 261 ----------LQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDA 310 L IL + + D +D V +A+ YI + VD V A Sbjct: 139 SGYELRLQGYLSIILSELIDISAMDILDTNKHSDIYVRKALQYIETNYSGSTSVDAVAKA 198 Query: 311 VGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYS 370 +G++R+ FK+ +G + I K+ KA L + +L+I+EIS+ GY F Sbjct: 199 IGLNRNYFSTIFKKHIGISPKEYIIRYKIGKACEFLKNNSLTISEISKSVGYNDPLSFSK 258 Query: 371 VFKKAYDTTPKEYR 384 VFK +PK YR Sbjct: 259 VFKHIKGVSPKYYR 272 >UniRef50_C6LB63 Putative response regulator receiver domain protein n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LB63_9FIRM Length = 517 Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 54/276 (19%), Positives = 106/276 (38%), Gaps = 17/276 (6%) Query: 122 FAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVV------YQGLETAPENWQHAQNRLA 175 FAFY S + + + A+ + + KYR + L + L Sbjct: 250 FAFY--VSSVQENMYKQMQKAYEEALTVWKYRFYSLGDYCDFDLLGGRLDGEIEEIADLL 307 Query: 176 DWLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSV 235 + + Q II+ +++ +P P KLC + L ++ + Sbjct: 308 NPMLEKIKQNDIISAFQMLKSAVVKN-MEDKLPEPGKLC------RAVMLLLFQIVKALD 360 Query: 236 AQGARQMGYQAAKLLHRLLDKE--EMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHY 293 + + +M + + L R+ + E L+ + + + + + + Y Sbjct: 361 SMMSEEMKQKTDESLMRIYQSQTLERLLRFVYGFLLEIGKNINFQKEIRGVDVLEHCREY 420 Query: 294 IRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSI 353 + H I ++ + + + S FK G++ + +++KA+ LIST I Sbjct: 421 LEKHYMDEITMEMIAEKYYFNASYFSTVFKNYFGKSFSGYMTELRMQKAKEFLISTDWKI 480 Query: 354 NEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSE 389 EI+ GY YF FKK Y TP+EYR ++++ Sbjct: 481 KEIASKTGYRDANYFIRAFKKFYGYTPEEYRKLSAQ 516 >UniRef50_C4FUL3 Putative uncharacterized protein n=2 Tax=Catonella morbi ATCC 51271 RepID=C4FUL3_9FIRM Length = 277 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 38/191 (19%), Positives = 76/191 (39%), Gaps = 12/191 (6%) Query: 210 PEKLCVIGIDNEELTRYLSRVALSSVAQGA--------RQMGYQAAKLLHRLLDKEEMPL 261 P C I + + ++ + L++ + ++ E + Sbjct: 87 PWTYCWIEFNGLKAANFMRQAGLNANNLIFTPHKPMIISSIKDTLETIIRNHSQHESFLI 146 Query: 262 QRILVPPVRVIERRSTDYRSLTDP----AVIQAMHYIRNHACKGIKVDQVLDAVGISRSN 317 ++ + +I + + + +A+HYI++H VDQ+ D ++R+ Sbjct: 147 AQLYLLVDHLIRFSKHSPQQRPNEIHSFYIREAIHYIQDHYMDNPSVDQLADICHLNRNY 206 Query: 318 LEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYD 377 + FK+E+ T I ++ ++ LL ST SI +I+ GY + F S FK+ Sbjct: 207 FTRLFKQELHMTPSQFILTYRINQSCELLASTNRSIRDIADQIGYSNQFNFSSAFKRVKG 266 Query: 378 TTPKEYRDVNS 388 TP E+R Sbjct: 267 MTPMEWRRRYR 277 >UniRef50_UPI0001C368F3 two component transcriptional regulator, AraC family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C368F3 Length = 538 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 46/281 (16%), Positives = 100/281 (35%), Gaps = 13/281 (4%) Query: 116 EKGVNRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLA 175 + G+ + G P + + A++ + + +N Q QN + Sbjct: 260 KLGIKSYVGVGTPVERLEDIRSSYRQAYQNSQVAKYSHNKSFLANPPQEQNQQELQNLIN 319 Query: 176 DWLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPE----KLCVIGID--NEELTRYLSR 229 ++ LP + + A ++ +P + V+ + N L + Sbjct: 320 TVMEELPLFMQL--PQEDTALQRVEAAYDSLERIPSHVLSDVMVLSLSIVNIVLATLRDK 377 Query: 230 VALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQ 289 + + Y L D + LQ + +V + + + + Sbjct: 378 GISYNEIYNTDHLPYTHILKLTDEKDIRQYVLQMVRFTLYQV----NLYTDARGNKLIHT 433 Query: 290 AMHYIRNHACKG-IKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLIS 348 + Y+ + K + + ++ + ++ S L + FKE + ++EKA+ LL + Sbjct: 434 ILQYLNENLSKSTLTLKKIAEINYVNPSYLSRIFKEVTQMNFVDYLATLRIEKAKRLLQT 493 Query: 349 TTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSE 389 L I EI++ G YF +FKK + TP +Y++ Sbjct: 494 GNLRIYEIAESVGISDPNYFSKLFKKYTNMTPAQYKEEIHR 534 >UniRef50_C6CRZ9 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CRZ9_PAESJ Length = 501 Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats. Identities = 49/170 (28%), Positives = 79/170 (46%), Gaps = 5/170 (2%) Query: 223 LTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDK-EEMPLQRILVPPVRVIERRSTDYRS 281 + L+ +S V G A LL + M L+ + E R ++ Sbjct: 332 INHSLALDQISEVLGLFSHQGKSAESLLQTIDQLPGSMELKSWFKAACQDFETRLDRWKQ 391 Query: 282 LTDPA---VIQAMHYIRNHA-CKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAE 337 +P + QA+ YI H + + QV + + ++ S L FK+E GET ++ Sbjct: 392 QANPYVNSIQQAIDYIEEHYLDSDLSIKQVAENIHLNPSYLSTLFKKETGETFTGYVNKL 451 Query: 338 KLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVN 387 KL+KA+ LL +T + I+EI Q G+ YF SVFKK + +P E+R + Sbjct: 452 KLQKAQVLLRNTDMKISEICQTVGFEDSTYFSSVFKKHFQISPSEFRQNH 501 >UniRef50_Q9KDT8 BH1123 protein n=1 Tax=Bacillus halodurans RepID=Q9KDT8_BACHD Length = 526 Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats. Identities = 43/199 (21%), Positives = 75/199 (37%), Gaps = 1/199 (0%) Query: 185 TGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGY 244 I RA+ +L+ + VP V E+ ++ Sbjct: 323 DAIRYADATRAKEVLEEAVGVLGEVPYSTLVGYKVGIEIWTIITYSLYDIGILIQEMFDE 382 Query: 245 QAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDP-AVIQAMHYIRNHACKGIK 303 H R L + I ++ + Q M YI H + I Sbjct: 383 DFDLAQHLTKQGNWQEWIRFLCEQIEHICYHQQWDENIKHKQLIEQVMIYIEKHLAENIT 442 Query: 304 VDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYP 363 + + D + ISR+ L + FK+ VGE+ + ++EKA+ ++ I E+S+ GY Sbjct: 443 LQDIADELYISRNYLGQIFKKVVGESFKNYVTRLRMEKAKKMIQEGNFLIYEVSEKVGYV 502 Query: 364 SLQYFYSVFKKAYDTTPKE 382 + YF ++FKK TP++ Sbjct: 503 NPAYFTTMFKKYTGYTPRD 521 >UniRef50_A4XFU2 Two component transcriptional regulator, AraC family n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XFU2_CALS8 Length = 508 Score = 168 bits (425), Expect = 4e-40, Method: Composition-based stats. Identities = 38/169 (22%), Positives = 81/169 (47%), Gaps = 2/169 (1%) Query: 223 LTRYLSRVALSSVAQGARQMGYQAAKLL-HRLLDKEEMPLQRILVPPVRV-IERRSTDYR 280 + + L + L+ + + + AK + L +E +++ L+ V I++ Sbjct: 340 VYKKLFDLILTKAKEICPVLKDEFAKSMAFSLNMQESNNIEKSLIEFVHYCIDKIQNVKE 399 Query: 281 SLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLE 340 S + A+ YI + I + + + G+S + K FKEE G++ ++ ++ Sbjct: 400 SRHKKIIKDAITYIERNYANQIFLSDIAEVCGVSPNYFCKIFKEETGKSFVDFLNELRIN 459 Query: 341 KARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSE 389 KA+ LL+ST L E+++ G+ +YF +FKK T+P ++++ + Sbjct: 460 KAKELLLSTNLKSYEVAEKVGFNDYKYFSMIFKKYTGTSPSKFKEERQK 508 >UniRef50_UPI000178A7F3 two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178A7F3 Length = 349 Score = 167 bits (424), Expect = 5e-40, Method: Composition-based stats. Identities = 46/225 (20%), Positives = 88/225 (39%), Gaps = 10/225 (4%) Query: 164 PENWQHAQNRLADWLQTLPPQTGIIAVTDARA--RHILQVCEHLHIPVPEKLCVIGIDNE 221 + + ++L DWL+ L + + D + + I C E + + + +E Sbjct: 129 KQRFYFPLSKLEDWLEQLELAVWHLQMNDIQMKLQEIEDYCNERRF---ESIQLQELLDE 185 Query: 222 ELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRS 281 + + ++ V R G +R + + ++ + Sbjct: 186 LYAKLIKQLNGRDVYSFERMTGISGPA-----PGGNHHYFERFRLAVNQTVKLIREKRKG 240 Query: 282 LTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEK 341 V +A YI + + + +D+V D +G++ S + FK+ ET +++EK Sbjct: 241 NAKEPVEEAKAYIERNLSRDLSLDEVADMLGLNPSYFSQLFKQMTDETFVHYRIKKRMEK 300 Query: 342 ARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDV 386 A+ LL I +IS GY +F FKK TP EYR++ Sbjct: 301 AKKLLAIPHYKITDISFEVGYADHPHFTKTFKKVTGYTPSEYREM 345 Score = 48.4 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 30/191 (15%), Positives = 70/191 (36%), Gaps = 54/191 (28%) Query: 235 VAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYI 294 ++ +Q Y L L++ E+ + + + +++ + + Y Sbjct: 124 ISMQEKQRFYFPLSKLEDWLEQLELAVWHLQMNDIQM--------------KLQEIEDYC 169 Query: 295 RNHACKGIKVDQVLDAVGI---------------------------SRSNLEKRFKEEVG 327 + I++ ++LD + + E+ F+ V Sbjct: 170 NERRFESIQLQELLDELYAKLIKQLNGRDVYSFERMTGISGPAPGGNHHYFER-FRLAVN 228 Query: 328 ETIHAMIHAEK-------LEKARSLL---ISTTLSINEISQMCGYPSLQYFYSVFKKAYD 377 +T +I ++ +E+A++ + +S LS++E++ M G + YF +FK+ D Sbjct: 229 QT-VKLIREKRKGNAKEPVEEAKAYIERNLSRDLSLDEVADMLGL-NPSYFSQLFKQMTD 286 Query: 378 TTPKEYRDVNS 388 T YR Sbjct: 287 ETFVHYRIKKR 297 >UniRef50_C5VY46 AraC-family regulatory protein n=8 Tax=Streptococcus RepID=C5VY46_STRSE Length = 278 Score = 167 bits (424), Expect = 5e-40, Method: Composition-based stats. Identities = 39/191 (20%), Positives = 81/191 (42%), Gaps = 12/191 (6%) Query: 210 PEKLCVIGIDNEELTRYLSRVALSSVAQGARQ--------MGYQAAKLLHRLLDKEEMPL 261 P + D + +L + LS Q + ++ ++L K + L Sbjct: 88 PWTYIWLEFDGLKTEHFLRQAGLSKEQPIFSQREMPTSSPVYHEMKQILALHHQKSALVL 147 Query: 262 QRILVPPVRVIERRSTDYRSLTDP----AVIQAMHYIRNHACKGIKVDQVLDAVGISRSN 317 + + +I+ T S D + +A++++ + K I VD + ++R Sbjct: 148 GHLYLFISCLIDCSLTKTSSKHDENKEFYIREAINFVERNYEKAISVDDLAQVCNLNRHY 207 Query: 318 LEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYD 377 + FKE++ + I +L +A LL +TT ++ EI++ GY + F + FK+ Y Sbjct: 208 FSRLFKEQMNISPQQFIIQYRLSEACELLKNTTKTLQEIAEEIGYSNQFNFSTAFKRHYQ 267 Query: 378 TTPKEYRDVNS 388 +P +R ++ Sbjct: 268 ISPNRWRKIHK 278 >UniRef50_C4ZBG0 Transcriptional regulator, AraC family n=5 Tax=Clostridiales RepID=C4ZBG0_EUBR3 Length = 279 Score = 167 bits (424), Expect = 5e-40, Method: Composition-based stats. Identities = 39/200 (19%), Positives = 77/200 (38%), Gaps = 10/200 (5%) Query: 200 QVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQM--GYQAAKLLHRLLDKE 257 +V P + +G + L + + G + + L + D Sbjct: 77 EVIYQADAQDPWEYTWVGFTGSDAATILRATDFTKAHPYIHSVSNGNEIKRQLMHIYDAR 136 Query: 258 EMPLQRILVPPVRVIERR--------STDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLD 309 + L R+ S ++ + V + + YI + I V+ + Sbjct: 137 GTEFENALEMTGRLYTTLALFVSAATSKPPQNSANSYVQKGIEYISANYSYPITVEDIAS 196 Query: 310 AVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFY 369 +G+SRS+L + F+ +G + + ++++A LL ++LSI I+ G+ + YF Sbjct: 197 YIGLSRSHLFRSFQSILGVSPKEYLTDFRIKQACYLLKHSSLSITAIAGSIGFDNSLYFS 256 Query: 370 SVFKKAYDTTPKEYRDVNSE 389 F K +PKEYR + Sbjct: 257 KTFHKIKGLSPKEYRSKYKK 276 >UniRef50_D2LQR6 Transcriptional regulator, AraC family n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LQR6_BACS4 Length = 302 Score = 167 bits (423), Expect = 6e-40, Method: Composition-based stats. Identities = 49/197 (24%), Positives = 87/197 (44%), Gaps = 15/197 (7%) Query: 210 PEKLCVIGIDNEELTRYLSRVALSSVAQGAR-QMGYQAAKLLHRLL------DKEEMPLQ 262 P IG D + L + S + ++ + G L+ +L ++ + Sbjct: 92 PWTYIWIGFDGMKAESCLINASFSKENRVSKFECGETLVHYLNGMLSASKLTYSNDLKRE 151 Query: 263 RILVPPVRVIERRSTDYRSLTDP--------AVIQAMHYIRNHACKGIKVDQVLDAVGIS 314 L + + + TD S V A+ +I ++ K IKV + + +GI+ Sbjct: 152 GYLYMFLSALIQEKTDNNSDKPEVYDYPFLVYVEHALDFISHNYEKQIKVIDIAEYIGIN 211 Query: 315 RSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKK 374 RS L FK+ + + + +L+KA +LL +T L +NEI++ GY + F VFK Sbjct: 212 RSYLTTIFKKSLKVSPQEYLVKYRLDKACTLLKNTDLLVNEIARNVGYNNALTFSKVFKN 271 Query: 375 AYDTTPKEYRDVNSEVM 391 Y +PK YR + E++ Sbjct: 272 YYKMSPKTYRTQHQELV 288 >UniRef50_C0BFD5 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C0BFD5_9FIRM Length = 305 Score = 167 bits (423), Expect = 6e-40, Method: Composition-based stats. Identities = 40/191 (20%), Positives = 82/191 (42%), Gaps = 11/191 (5%) Query: 210 PEKLCVIGIDNEELTRYLSRVALSSVAQGAR-QMGYQAAKLLHRLLDKEEMPLQRILVPP 268 P +G E R++ + L+S + G + +++ +L + + Sbjct: 85 PWSYLWVGFGGTEAQRFVRDLGLNSRQLTCECEYGEELKEIVFEMLHHTCSTAENLYYLQ 144 Query: 269 VRV----------IERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNL 318 ++ IE + + V +A+ YI+N+ + I V+ + + + ++RS L Sbjct: 145 GKLYQFFSVLARGIEIQQYSNDTKESIHVQEAIAYIKNYYSQKITVEDIANYLALNRSYL 204 Query: 319 EKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDT 378 F +G + + ++ + + L T LS+ EI+ CGY + F VFK+ Sbjct: 205 YTIFMNSLGISPKEFLTEFRISRGKEQLALTDLSVEEIAVSCGYRNSLAFGKVFKQKMGM 264 Query: 379 TPKEYRDVNSE 389 TP +YR+ N + Sbjct: 265 TPTQYRNDNRK 275 >UniRef50_C4ZBY6 Transcriptional regulator, AraC family n=7 Tax=Clostridiales RepID=C4ZBY6_EUBR3 Length = 280 Score = 167 bits (423), Expect = 6e-40, Method: Composition-based stats. Identities = 41/193 (21%), Positives = 78/193 (40%), Gaps = 12/193 (6%) Query: 208 PVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLL-HRLLDKEEMPLQ---- 262 +P + I D + L+ L+ + L +L P + Sbjct: 88 KLPWEYIWIEFDGLRVKEALTTTELTKNNPVYHTHSKDIREKLVEEMLYITRHPSESPYH 147 Query: 263 ---RILVPPVRVIERRSTDYR----SLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISR 315 + + +++ + ++D + +AM+YI + I ++ + GI+R Sbjct: 148 LIGHMYLFLDYLMQSAKSSKLVPGGKMSDFYIKEAMNYIEQNFQNDISIEDIAGVCGINR 207 Query: 316 SNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKA 375 S L K FK VG + + ++ KA LL T+LSI ++ GY + +F FK Sbjct: 208 SYLGKIFKNSVGHSPQEFLMNYRMIKATELLKLTSLSIADVGSAVGYENQLHFSRAFKNI 267 Query: 376 YDTTPKEYRDVNS 388 Y P+E+R+ + Sbjct: 268 YGVAPREWRNEHK 280 >UniRef50_B9MLQ2 Two component transcriptional regulator, AraC family n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MLQ2_ANATD Length = 519 Score = 167 bits (423), Expect = 7e-40, Method: Composition-based stats. Identities = 33/181 (18%), Positives = 76/181 (41%), Gaps = 3/181 (1%) Query: 213 LCVIGIDN--EELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVR 270 + + G +N ++ + + + L + + + + L E ++ + Sbjct: 336 IELFGENNLKYKVIKLIIMLLLETGIATSDESIDVEKLISQILNSSYEQIVEIFKKAVLS 395 Query: 271 VIERRSTDYRSL-TDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGET 329 + + T + + + ++ +A+ +I + + I + Q+ + K FK+ G + Sbjct: 396 LFSKAKTKHEQIINNDSINKAIEFINQNYSEEITLSQISSTFNFNPYYFSKLFKKYTGVS 455 Query: 330 IHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSE 389 + +++KA LL +T+ SI EIS G+ YF FKK TP +R + + Sbjct: 456 FKTYLTKLRIQKACQLLKNTSKSIKEISFAVGFSDPNYFIKAFKKFTGMTPSAFRSSSVD 515 Query: 390 V 390 + Sbjct: 516 I 516 >UniRef50_B8I425 Two component transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=B8I425_CLOCE Length = 538 Score = 167 bits (423), Expect = 7e-40, Method: Composition-based stats. Identities = 37/161 (22%), Positives = 80/161 (49%), Gaps = 5/161 (3%) Query: 229 RVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVI 288 R+++SSV + + L +L++K + + + V R ++ S + ++ Sbjct: 376 RISVSSVDTEKKYSEGEDIASLIKLIEKTDKA-EELNSLLEEVAVRIASKVNSFNNKSIK 434 Query: 289 ----QAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARS 344 +A+ YI+ H + + +++V + + +S + + FK+E+G++ ++ +++KA+ Sbjct: 435 LILRKAIDYIQEHYNEQVTLNEVAENIYVSTFYISRMFKKELGKSFVDYLNDVRIDKAKE 494 Query: 345 LLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRD 385 LL E+++ G YF +FKK TP EYRD Sbjct: 495 LLKDVRYKTYEVAEKVGISDPHYFSKLFKKYSGMTPSEYRD 535 >UniRef50_B0K339 Response regulator receiver protein n=9 Tax=Thermoanaerobacterales RepID=B0K339_THEPX Length = 365 Score = 167 bits (423), Expect = 7e-40, Method: Composition-based stats. Identities = 58/359 (16%), Positives = 119/359 (33%), Gaps = 42/359 (11%) Query: 42 EEDFRARIDKIKDWLGDGVIADFDDK-----QIEQALADVDVPIVGVGGSYHLAESYPPV 96 E + ++ +D D ++ D ++ + + +D +V + S Sbjct: 33 EANGKSALDVFNREQPDIILTDIRMPFMDGLELTREVKKLDPLVVVILLS---------- 82 Query: 97 HYIATDNYALVESAFLHLKEKGVNRFAFYGLPESSGKRWATEREYAFR--QLVAEEKYRG 154 A D++ + A + F + P T R + +L+ ++K Sbjct: 83 ---AYDDFKYAQQAIR------LGAFDYILKPIDIDTLKETVRRAVLKRKELLDKKKEPL 133 Query: 155 VVYQGLETAPENWQHA------QNRLADWLQTLPPQTGIIAVTDARARHILQVCEHLHIP 208 + ++ + +L+ ++ + D I + Sbjct: 134 PSLNKEDLKFFKAEYYKYPLKLEEKLSKAIKRGDKDLALNIFND-----IWNEFHDKNYT 188 Query: 209 VPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPP 268 L ++R + L +E + + Sbjct: 189 EDFIKRW----GLGLVAVITRSFIEIGENADILFKETDPWRQISELSTKEKFREWMRNII 244 Query: 269 VRVIERRSTDYRSLTDPAVIQAMHYIRNHACK-GIKVDQVLDAVGISRSNLEKRFKEEVG 327 V E S S + +A+ I+ + I ++ + + + I+ + L FK E+G Sbjct: 245 EVVCEYVSLTKNSKNRKLIDEAIKLIQENYSDLNISLNSIAEKLYITPNYLSTLFKSEMG 304 Query: 328 ETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDV 386 T + A ++EKA+ LL + I E+++ GY YF VFK TPKEYR+ Sbjct: 305 VTFSDYLTACRIEKAKELLKDVKVKIYEVAEAVGYTDQHYFSKVFKNITGFTPKEYREK 363 >UniRef50_C6LL33 Two-component response regulator n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LL33_9FIRM Length = 529 Score = 167 bits (423), Expect = 7e-40, Method: Composition-based stats. Identities = 55/265 (20%), Positives = 102/265 (38%), Gaps = 8/265 (3%) Query: 125 YGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQTLPPQ 184 G ++ A + A +L+ E +G + + N + +L+ + Sbjct: 272 LGRAVRQPEQLAASMKEA-AELMQERIVKGTGRVLEHMGGPSALKSSNVMERYLREITQA 330 Query: 185 TGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGY 244 +++V A A E L V V G + EL + + V R Sbjct: 331 VELLSVERADA-----AAELLKAEVRGTKDVRGCEIAELVSSACDIFSAHVQMQERSQKM 385 Query: 245 Q-AAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIK 303 + + + + EE+ + + IE + T + A YI+NH + I Sbjct: 386 EKFRQRCGQCRNMEEL-FACLQDFQRQEIEAMLRKRENDTVRPIRIAKEYIQNHYSEPIT 444 Query: 304 VDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYP 363 +++V AVG+S + FK+ G + ++E+A+SLL T + EI + GY Sbjct: 445 LEEVSSAVGLSTAYFSTLFKKTEGGGFAKYLIQVRMEQAKSLLRETNTPVAEICRQVGYN 504 Query: 364 SLQYFYSVFKKAYDTTPKEYRDVNS 388 +++F F+K P YR + Sbjct: 505 DIKHFTHTFEKMVGVKPATYRKLYG 529 >UniRef50_C6LM61 Putative raffinose operon transcriptional regulatory protein RafR n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LM61_9FIRM Length = 252 Score = 167 bits (422), Expect = 8e-40, Method: Composition-based stats. Identities = 41/212 (19%), Positives = 85/212 (40%), Gaps = 18/212 (8%) Query: 199 LQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAK-LLHRLLDKE 257 ++ P IG + L + + + ++L Sbjct: 30 VEAWYEADKETPWSYRWIGFEGVSARECLESAGFTPQKPVRKVRCLDKVGGYIDQMLKCH 89 Query: 258 EMPLQRIL---VPPVRVIERRSTDYRS--------------LTDPAVIQAMHYIRNHACK 300 ++ + L + V TD R + V A+ YI + K Sbjct: 90 QLYYENELKRNALLMLVFAELITDNRKNLAGMGKYPSEHRYPSSVYVEHAIEYINENYSK 149 Query: 301 GIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMC 360 ++++++ D +G++RS L F+E +G + + ++EKA++LL + + +NE++ M Sbjct: 150 RLRINELADYIGVNRSYLTSSFQENIGCSPREYLMKLRMEKAKTLLKNPDIQVNEVAAMV 209 Query: 361 GYPSLQYFYSVFKKAYDTTPKEYRDVNSEVML 392 GY F +FK +PKEY++ S +++ Sbjct: 210 GYTDPLAFSKIFKSRTGRSPKEYKEEKSRLVV 241 >UniRef50_C4Z204 AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR n=2 Tax=Clostridiales RepID=C4Z204_EUBE2 Length = 277 Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 40/194 (20%), Positives = 76/194 (39%), Gaps = 17/194 (8%) Query: 193 ARARHILQVCEHLHI-PVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLH 251 + +++ C + +PEK + + L ++ + + + L+ Sbjct: 96 QTGKELMENCMKPGVVNIPEK------RRDYVVALLDKLIFENDSPDELSPAFIKVGLIE 149 Query: 252 RLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAV 311 LL + + E + + + + YI H + ++ V D Sbjct: 150 LLL----------FIIRCKNYEENVIKEIDVDNRIIQEVATYIYEHYADNLSLEYVADKF 199 Query: 312 GISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSV 371 +SRS L K+FK G I +++ A +LL+ T SI +I+ CG+ YF Sbjct: 200 NLSRSYLSKKFKTATGFGFKEYIINVRIQNACNLLLETNKSITDIAFECGFNDSNYFGDA 259 Query: 372 FKKAYDTTPKEYRD 385 F+KA +P +YR Sbjct: 260 FRKAKGISPHKYRK 273 >UniRef50_A6P0J9 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6P0J9_9BACE Length = 425 Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 50/267 (18%), Positives = 106/267 (39%), Gaps = 17/267 (6%) Query: 127 LPESSGKRWATEREYAFRQL-----VAEEKYRGVVYQGLETAPENWQHAQNRLADWLQTL 181 + + R RQL + + K + W ++RLA +Q Sbjct: 160 HSHKNWDDYEQLRLRYQRQLTVGDHIQKRKQSKPQNTSAALSAPTWSDLEDRLAREIQGR 219 Query: 182 PPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVA--QGA 239 + + + D +L E + I + EL L+R++ A + Sbjct: 220 NREAALACLDDLFEELVL--VEGGNFDS------IKLHFFELYISLARMSTERGASLRNI 271 Query: 240 RQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHAC 299 + ++ L+ L + + + ++ D ++ +A+ YI H Sbjct: 272 FGLDFKFINSLNELNTLDSLAQWSREL-VAHFVDDIFADLPQVSSAT-TRAVSYINAHYM 329 Query: 300 KGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQM 359 + + + A+ ++ S+L K F++E+G + ++ ++E + L+ +T S+ EIS + Sbjct: 330 DKLTLRDLASALFLNESSLSKLFRQELGTSFTDYLNRIRIEHSTELMRNTDRSLLEISGL 389 Query: 360 CGYPSLQYFYSVFKKAYDTTPKEYRDV 386 G+ YF +FKK TTP++Y+ Sbjct: 390 VGFDDQSYFTKIFKKVTGTTPRQYKSQ 416 >UniRef50_C6QRS7 Two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y4.1MC1 RepID=C6QRS7_9BACI Length = 269 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 37/176 (21%), Positives = 72/176 (40%), Gaps = 1/176 (0%) Query: 214 CVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIE 273 ++ + + + AL A ++ + ++ +++ Sbjct: 78 IILLSGYDLFGSEILQRALEMGADEILMKPSHQEDVIALIRRYMTFN-EKENDKFDSMLD 136 Query: 274 RRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAM 333 + + A++YI + GI +++V + V IS L K FK+E+ + Sbjct: 137 GITAKNSIQDGKVIQSALNYIEENYQNGITLEEVAEHVHISPFYLSKLFKKELKMNFVSY 196 Query: 334 IHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSE 389 + +K++KA+ LL +T L + I+ Y YF VFKK TP EYR + + Sbjct: 197 VTEKKMQKAKELLENTDLPVIHIALELNYQEPNYFSKVFKKVVGITPSEYRKRSKK 252 >UniRef50_Q0SVP8 Transcriptional regulator, AraC family n=3 Tax=Clostridium RepID=Q0SVP8_CLOPS Length = 284 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 44/188 (23%), Positives = 82/188 (43%), Gaps = 12/188 (6%) Query: 210 PEKLCVIGIDNEELTRYL-------SRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQ 262 P I + + +YL + + ++ L+R+ E+ +Q Sbjct: 93 PWTYMWIAFNGIKAKKYLNYANLNEDNLIFEYTEDDSLEIYINRMFELNRMNYSNELEIQ 152 Query: 263 RILVPPV----RVIERRSTDYRSLTDPAVIQAMHYIRNHACK-GIKVDQVLDAVGISRSN 317 +L + S +++D V +A+ +++N+ +K+ V + VG++RS Sbjct: 153 GLLYLFLSKLAMSKNENSLKSNNISDFYVEKAIEFMQNNYLNPDLKITDVANFVGLNRSY 212 Query: 318 LEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYD 377 L FK+ + + + ++ +A SLL +T LS+ IS+ GY F VFKK Sbjct: 213 LTHLFKKSLKLSPQEFLLNYRINEATSLLKNTNLSVGTISKSIGYNDQLTFSKVFKKVKG 272 Query: 378 TTPKEYRD 385 +PK YRD Sbjct: 273 ISPKTYRD 280 >UniRef50_UPI0001787D2D two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001787D2D Length = 535 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 47/283 (16%), Positives = 103/283 (36%), Gaps = 15/283 (5%) Query: 114 LKEKGVNRFAF---YGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHA 170 ++ F G+ + + E +F+Q + Y Y G N+ A Sbjct: 255 FIDRVRLEFGLTLSIGVGDGVVDLY-REAPRSFKQALHALDYTF--YCGSGKVVVNYGIA 311 Query: 171 QNRLADWLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKL-----CVIGIDNEELTR 225 N L+ +P +TGI A R R + E L + + + L + + L Sbjct: 312 YNPYKPSLELVPAETGIAAAVANRERE--KAIESLSLLIRQLLDGDYPSPSHLKHSILYV 369 Query: 226 YLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPL--QRILVPPVRVIERRSTDYRSLT 283 ++ V S + + + +++ ++ + ++ R+I+ + Sbjct: 370 LVNLVKASEASIRSEEANNFVSEMEFQIPACATLDEVEEKAGYYLNRIIDSIENRRNNKN 429 Query: 284 DPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKAR 343 + + Y+ H + + ++ V S + F+ T + +++KA Sbjct: 430 ERIIAMCKAYLAEHYMEDLSLELVAKRFFFSPAYFSSFFRSHTSMTFTEYLLKLRMDKAM 489 Query: 344 SLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDV 386 +L I+EI+ G+ YF +FK+ +P+E+R Sbjct: 490 QMLEGGNRKISEIALSVGFRDAGYFTRIFKRETGLSPEEFRKK 532 >UniRef50_B2GEN0 Transcriptional regulator n=1 Tax=Lactobacillus fermentum IFO 3956 RepID=B2GEN0_LACF3 Length = 278 Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 45/192 (23%), Positives = 84/192 (43%), Gaps = 12/192 (6%) Query: 208 PVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQM-GYQAAKLLHRLLDKEEMPLQRILV 266 P +G + ++ ++ +S + Y+ A ++ +L + + ++ L Sbjct: 83 ETPWSYVWLGFTGKSAATWIDQINISEIRPVFNSNKSYELANCVNEILALDNLSMENNLR 142 Query: 267 PPVRVIERRS----------TDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRS 316 S S + V QA+ YI +H K + V+ + AV ++RS Sbjct: 143 ALSCFFRFLSYIATGTVINIQQANSEKNHYVTQAIQYISHHLSK-VTVESLAHAVNLNRS 201 Query: 317 NLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAY 376 L FK ++ T I ++ KAR LL S+ +SI+++++ CGY F VFK+ Y Sbjct: 202 YLTSLFKHDLDLTPSEYIQNFRITKARHLLESSDISIDQVAEQCGYQRTNSFTRVFKRTY 261 Query: 377 DTTPKEYRDVNS 388 +P++YR Sbjct: 262 GISPRQYRQETK 273 >UniRef50_B0K234 Response regulator receiver protein n=8 Tax=Thermoanaerobacteraceae RepID=B0K234_THEPX Length = 537 Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 41/181 (22%), Positives = 74/181 (40%), Gaps = 9/181 (4%) Query: 213 LCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAA-------KLLHRLLDKEEMPLQRIL 265 + + +E + + + R + Y A + L +L ++ + + Sbjct: 344 YEWMVFEYQEDIDKIKAKLIEIIGVIKRNLSYYAEDENFIENRELEEILKINDVDKIKFI 403 Query: 266 VP--PVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFK 323 + E T + D + + + +I ++ K I +D V V +S K FK Sbjct: 404 FINTLKNLFENIKTINKEKMDTFIAKIIRFIEDNFNKDITLDDVAKEVNMSYHYFSKFFK 463 Query: 324 EEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEY 383 ++ G+ + ++ KA+ LL T+SI E+ GY YF +FKKA TP EY Sbjct: 464 DQTGKNFIDYLTNLRVTKAKELLEDETVSIKEVCYKVGYSDPNYFSKIFKKATGMTPTEY 523 Query: 384 R 384 R Sbjct: 524 R 524 >UniRef50_B0PG61 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PG61_9FIRM Length = 533 Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 50/216 (23%), Positives = 84/216 (38%), Gaps = 20/216 (9%) Query: 184 QTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTR---------YLSRVALSS 234 QT + + A ++ + G EL R YL L Sbjct: 327 QTALELLNPMMALEAIEA-MRAGLE-----NAGGYTGGELLRLTAEACGTWYLLARNLQY 380 Query: 235 VAQGARQMGYQAAKLLHRLLDKEEM--PLQRILVPPVRVIERRSTDYRSLTDPAVIQAMH 292 G + + A+ +++ L+ +L ++V+ S R + A Sbjct: 381 DVPGGDTLRERFARRADLCASADDVWCCLRGMLSEAMQVL---SEQKRQADTRPIRTAKQ 437 Query: 293 YIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLS 352 YI+ H + ++ V + VG S S FK+E G+ + ++ +A+ LL T LS Sbjct: 438 YIQEHYADPLTLEWVSNIVGFSGSYFSSLFKKETGQNFLEYLSEVRMNRAKELLRETNLS 497 Query: 353 INEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNS 388 + E+ GY L+YF FKKA P E+R + S Sbjct: 498 VAEVCVRVGYSDLKYFTKSFKKATGLKPGEFRKLYS 533 >UniRef50_A6M1S5 Transcriptional regulator, AraC family n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6M1S5_CLOB8 Length = 286 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 44/195 (22%), Positives = 79/195 (40%), Gaps = 13/195 (6%) Query: 210 PEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQ---------AAKLLHRLLDKEEMP 260 P + + + RYL + LSS Y LL+ + Sbjct: 92 PWNYVWVEFEGLKAQRYLEEIGLSSKNLIFTPKEYNNDDNSIKDNLMFLLNNPSAPDSAI 151 Query: 261 LQRILVPPVRVIERRSTDYRSLTDP----AVIQAMHYIRNHACKGIKVDQVLDAVGISRS 316 L + + ++E S + V +A++YI + I V+ + + RS Sbjct: 152 LGHLYLFFYALLENSSFNNTKSASNLQEFYVREAINYIEKNYNNNISVENIAKWCNLDRS 211 Query: 317 NLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAY 376 K FK + T + +L KA +L +SI EIS++ GYP+ +F FK+ Y Sbjct: 212 YFGKIFKNSMKTTPQEFLIKYRLSKACEMLKDNNISIREISELTGYPNQFHFSRSFKEVY 271 Query: 377 DTTPKEYRDVNSEVM 391 + +P+++R+ N + Sbjct: 272 NMSPRQWRNQNKTKL 286 >UniRef50_A8SRM1 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SRM1_9FIRM Length = 296 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 46/184 (25%), Positives = 78/184 (42%), Gaps = 9/184 (4%) Query: 210 PEKLCVIGIDNEELTRYLSRVALSSVAQGAR-QMGYQAAKLLHRLLDKEE------MPLQ 262 P + G LS + L+ + G + K + +L L Sbjct: 85 PWRYVWFGFSGRCAHDTLSSIGLTQNQPIFTCEDGDKLKKYVFDMLAHNTSGHADHYRLM 144 Query: 263 RILVPPVRVIERRSTDYRSLT--DPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEK 320 +L + VI D + V A+ YI+NH +KV+++ D VGI+RS Sbjct: 145 GMLYLALSVIANAQKDKLEAPSGNAYVNHAISYIQNHYSMPMKVEELSDYVGINRSYFSD 204 Query: 321 RFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTP 380 FK+ G + + ++ KA+ +L + LS+ I+ CGY S + F+ +F+K +P Sbjct: 205 LFKQYTGMSPVKYLQNFRITKAQHMLTISELSVESIAFSCGYQSAEAFHKIFRKTTGLSP 264 Query: 381 KEYR 384 YR Sbjct: 265 NAYR 268 >UniRef50_C5EK80 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C5EK80_9FIRM Length = 291 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 39/191 (20%), Positives = 76/191 (39%), Gaps = 12/191 (6%) Query: 210 PEKLCVIGIDNEELTRYLSRVALSSVAQ----GARQMGYQAAKLLHRLLDKEEMPLQRIL 265 P + + D + L L+ AR + + + + + + ++ Sbjct: 90 PWEYTWLEFDGLRVKEALELAGLTMDNPVYHSNARDLSLELKNEMLYIANHSDQSPFHLI 149 Query: 266 VPPVRVIERRSTDYR--------SLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSN 317 ++ + L D + +A +I + I V+ + ++RS Sbjct: 150 GHLYLFLDYLTRSSSSRRMMRGGKLQDFYIREATSFIEQNFQNDISVEDIAAFCNLNRSY 209 Query: 318 LEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYD 377 K F++ VG++ + + ++ KA LL T L+I +I GYPS +F FKK Y Sbjct: 210 FGKIFRDAVGKSPQEFLISYRMTKAAELLKLTELTIKDIGNAVGYPSQLHFSRAFKKTYG 269 Query: 378 TTPKEYRDVNS 388 +P+E+R N Sbjct: 270 ISPREWRSENK 280 >UniRef50_Q2BDI9 Two-component response regulator n=2 Tax=Firmicutes RepID=Q2BDI9_9BACI Length = 525 Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats. Identities = 52/272 (19%), Positives = 92/272 (33%), Gaps = 23/272 (8%) Query: 123 AFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLE-------TAPENWQHAQNRLA 175 A G P + + L ++ G Y E +P +A+ L Sbjct: 270 AGIGHPYEDAQELTKSYHESALALQKIKQLPGRSYLFGEKQGKTAAGSPPPGYNAEKELL 329 Query: 176 DWLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSV 235 + ++ + A H + E I + EL +SR+ Sbjct: 330 EAVRQADVNHVLSAFAGFMGSHAEEAQETADIRRSLQ---------ELFVLVSRMLYELG 380 Query: 236 AQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIR 295 + Y+ L + ++ +R++ S + +A YI Sbjct: 381 ------IDYRQVPELSD-YHDSAVLFEQGKNHLLRIVRHVQAWRNSHAKDMLYKAKEYIE 433 Query: 296 NHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINE 355 H + + ++ + V +S K FK+ G T + ++ KA+ L +LS+ E Sbjct: 434 AHYAEALTLESAAEYVDLSPFYFSKLFKDRFGMTFIDFVTDVRIRKAKHFLKEGSLSLKE 493 Query: 356 ISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVN 387 I GY YF VFKK +P EYR + Sbjct: 494 ICYSIGYKDPNYFSRVFKKHTGLSPTEYRKES 525 >UniRef50_C6D6F5 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D6F5_PAESJ Length = 778 Score = 163 bits (414), Expect = 7e-39, Method: Composition-based stats. Identities = 52/267 (19%), Positives = 106/267 (39%), Gaps = 25/267 (9%) Query: 125 YGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQTLPPQ 184 Y +++ + E+ + AE +Y + + L A + + ++ L Sbjct: 536 YRNCDNANQIIDMEQGVLGGEAWAEPQYPFTLERELIQALRTGKEEEA--SELLSAF--- 590 Query: 185 TGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRV-ALSSVAQGARQMG 243 G ++ A+ + Q HL + + V G++ L + ++ LS + + R + Sbjct: 591 VGALSCAGAKEIEVQQGMLHLLGNIQHVIMVSGVNPNRLFKGVNLYEQLSQIREPKRMLC 650 Query: 244 YQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIK 303 + K+L + S S + AM Y++ + + I Sbjct: 651 WFRDKVL------------------APYQKELSCRAGSEVKRLIEAAMIYMQQYYRQDIS 692 Query: 304 VDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYP 363 +D + +G + L K FK G+ + ++E+A+ LL + L IN++++ GY Sbjct: 693 LDNCAEHIGTNPFYLSKSFKVVTGKNFIDYLTELRIERAKELLRESELKINDVAEQVGYQ 752 Query: 364 SLQYFYSVFKKAYDTTPKEYRDVNSEV 390 YF +FKK TP YR+ + + Sbjct: 753 H-SYFNRIFKKLEGMTPTSYREQSQHL 778 >UniRef50_C1I3A1 Response regulator receiver protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I3A1_9CLOT Length = 249 Score = 163 bits (414), Expect = 7e-39, Method: Composition-based stats. Identities = 40/202 (19%), Positives = 85/202 (42%), Gaps = 1/202 (0%) Query: 183 PQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQM 242 P II +++ + + +PE +I + E Y V + + Sbjct: 48 PPDVIITDIKMPVMDGIELSKRIKEVIPEVYIIILTNFAEF-SYAKEAISCGVYEYLIKS 106 Query: 243 GYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGI 302 + +L L + +I + +++ + ++ +A+ YI ++ K I Sbjct: 107 DIRPKELSEILNKINAIIKSKIEIKDEEKLDKHNIVKPKAYSRSIEKALKYIDDNYKKHI 166 Query: 303 KVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGY 362 + V + +S + FKEEVGE + +++KA+ L+ +T + I++I+ GY Sbjct: 167 SLMDVAKHIYLSHEYFSRLFKEEVGENFSTYLTIYRIKKAKELIKNTDMKISQIALEVGY 226 Query: 363 PSLQYFYSVFKKAYDTTPKEYR 384 + YF +K+ +P+E R Sbjct: 227 SNAGYFSKNYKRYTGISPEEDR 248 >UniRef50_C3RN82 Transcriptional regulator n=2 Tax=Bacteria RepID=C3RN82_9MOLU Length = 267 Score = 163 bits (414), Expect = 8e-39, Method: Composition-based stats. Identities = 41/191 (21%), Positives = 81/191 (42%), Gaps = 12/191 (6%) Query: 210 PEKLCVIGIDNEELTRYLSRVALSSVAQ-------GARQMGYQAAKLLHRLLDKEEMPLQ 262 P I D + +YL R L + A ++L E+ +Q Sbjct: 62 PWTYLWISFDGSKTRQYLKRCNLDEHNLVVHCDYINELRETTIAILAHNKLSYSNELFIQ 121 Query: 263 RILVPPVRVIERRSTDYRSL-----TDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSN 317 L + + + + +P V +A+ YI+N+ + + V+++ D + ++RS Sbjct: 122 GQLYTFFSFLAKSANITYNDNVAPNYNPYVDKAIEYIQNNYQEMVTVNEIADYLSLNRSY 181 Query: 318 LEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYD 377 L FK+ + + + ++ +A LL +T L+IN+I+ CGY + F F ++ Sbjct: 182 LTTLFKKHLHLSPQEFLLKYRMMRAEDLLTNTDLTINQIAFSCGYSNQLSFSKAFSNSHQ 241 Query: 378 TTPKEYRDVNS 388 P++YR Sbjct: 242 MAPRDYRKQFK 252 >UniRef50_C0CGQ4 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CGQ4_9FIRM Length = 535 Score = 163 bits (414), Expect = 8e-39, Method: Composition-based stats. Identities = 41/180 (22%), Positives = 73/180 (40%), Gaps = 1/180 (0%) Query: 210 PEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPV 269 P + + EL + R Q + KE++ + + + Sbjct: 357 PSSVIDLCAKFLELLKDQIRNQYQKAGIDYDFPKKQYQAQIQNASSKEDL-ISTLKHMII 415 Query: 270 RVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGET 329 I + + QA YI +H + I +++V + + I+ S FK+E GET Sbjct: 416 GEISAFQKLQYTKDSRYISQAKEYIHDHLDQNITLNEVAEMLYINPSYFSTLFKKETGET 475 Query: 330 IHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSE 389 I ++ +++ LL SI+EIS M GY +YF VF+K P ++R + + Sbjct: 476 FSNYITQTRIGRSKELLRDLKYSISEISAMVGYQDSKYFSKVFQKTVGIKPSKFRKLYTN 535 >UniRef50_A8SBA6 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SBA6_9FIRM Length = 286 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 39/185 (21%), Positives = 77/185 (41%), Gaps = 11/185 (5%) Query: 210 PEKLCVIGIDNEELTRYLSRVALSSV-------AQGARQMGYQAAKLLHRLLDKEEMPLQ 262 P + +G + + +++ + + L ++E + Sbjct: 87 PWEYSWVGFNGACAHKLAAQLPFTDDAPVHHTSDPDGMRAALTNIYSSRGLQPQDEAAMV 146 Query: 263 RILVPPVRVIERRST----DYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNL 318 L + + R ++ S + V+ A+ YI+ + I +D V +VG+SRS+L Sbjct: 147 GYLYLFIAALMRETSAGKPHTASSSSQYVLNAIKYIQFNYSHDISIDDVAKSVGVSRSHL 206 Query: 319 EKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDT 378 + F VG++ + ++ +A LL + LSI E++ G+ YF VFK+A Sbjct: 207 YRVFMLNVGKSPIDYLTEYRINEACKLLRAGNLSIAEVAVSVGFFDQFYFSRVFKRAKGV 266 Query: 379 TPKEY 383 P +Y Sbjct: 267 PPSKY 271 >UniRef50_C7IHL5 Transcriptional regulator, AraC family n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IHL5_9CLOT Length = 287 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 48/288 (16%), Positives = 103/288 (35%), Gaps = 31/288 (10%) Query: 121 RFAFYGLPESSGKRWAT-------EREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNR 173 F F+G + + ++ + + Y G ++Q ++ R Sbjct: 7 NFGFFGTDVIGEQSLSIKDLGLETRQKENYLFDNSTRDYHGYLFQYTLDGYGIYESRNTR 66 Query: 174 L-----ADWLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLS 228 +L + P ++ + A I +++ Sbjct: 67 YKLTKGRAFLISFPEESKYYLPSSEDAPEHS-----------WTFFYIHFSGPAAAPFIN 115 Query: 229 RVALSSVAQGARQMGYQAAKLLHRLLD--------KEEMPLQRILVPPVRVIERRSTDYR 280 R+ + + + L + M + + + ++ Sbjct: 116 RIRELTGSVMELGIDSLPISYFFELYNNLHSQRPLGRYMGSEWLYRFLIALLRNIEFPTA 175 Query: 281 SLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLE 340 P V A+ +I + I ++++ +G++ S+L ++F +E G + + +LE Sbjct: 176 RKASPHVAAAIEWINRNYSNQINLEEMCPEIGVTYSHLTRQFCKEKGISPVQYLTNLRLE 235 Query: 341 KARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNS 388 LL++T LSI +I++ CG+ YF V+KKA TTP EYR+ + Sbjct: 236 HGMQLLLNTNLSIQKIAEACGFSCANYFTKVYKKAMHTTPVEYRNQHK 283 >UniRef50_C7GGB1 Putative two-component response regulator n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GGB1_9FIRM Length = 551 Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 41/168 (24%), Positives = 70/168 (41%), Gaps = 1/168 (0%) Query: 221 EELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYR 280 + +S + S Y+ A+ + L + I VIE R Sbjct: 374 DLYVSAVSVLEKSGYTSENLLEQYKDAQKMEIFLGTAGQAREYIKNLFGAVIELREQGME 433 Query: 281 SLTDPAVIQAMHYIRNHA-CKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKL 339 D + A YI ++ + I ++ V V +S S+ F +E G T + ++ Sbjct: 434 RRYDNLIQHAKAYIEDNYNHEDISLNMVASEVNLSSSHFSTVFGQETGVTFVEYLTKVRM 493 Query: 340 EKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVN 387 +KA+ LL +T EI+ G+ YF ++FKK TP+EYR+ + Sbjct: 494 DKAKQLLRTTGTKTTEIAFEVGFRDAHYFSNLFKKTQGCTPREYRNRS 541 >UniRef50_A4XMI8 Two component transcriptional regulator, AraC family n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XMI8_CALS8 Length = 516 Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 41/223 (18%), Positives = 81/223 (36%), Gaps = 8/223 (3%) Query: 168 QHAQNRLADWLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYL 227 + ++L + + + + V + L+ C I I + + Sbjct: 299 DESIHKLKELILAGKQKEALSCVENIFNHEFLKNCSIESIQ--------DIATKLYREII 350 Query: 228 SRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAV 287 R + Y K + + +E + + Sbjct: 351 ERFESQVPRKILDMSSYLLLKNILNFSNMKEYIEMLKNFVYEATSMIAALKGILTVKDEI 410 Query: 288 IQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLI 347 +A+ +I + K I + V + V ++ FKE G + ++ +++KA+ LL Sbjct: 411 EEAIKFINENYYKDINMAMVANHVSLNYYYFSTIFKERTGMSFLDYLNKVRIDKAKELLA 470 Query: 348 STTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSEV 390 +T L I EIS+ GY + ++F +FK+ TP EYRD + Sbjct: 471 NTNLKIWEISEKVGYKNPKHFARIFKEITGLTPNEYRDAQKRL 513 >UniRef50_B3EYL7 Two-component response regulator n=5 Tax=Firmicutes RepID=B3EYL7_BACST Length = 404 Score = 162 bits (409), Expect = 3e-38, Method: Composition-based stats. Identities = 67/383 (17%), Positives = 138/383 (36%), Gaps = 36/383 (9%) Query: 41 IEEDFRARIDK--------IKDWLGDGVIADFDDKQIEQALADVDVPIVG-VGGSYHLAE 91 I E R ID + G+ + +++ D+ +PI+ + + E Sbjct: 15 IREGIRESIDWNEFNMEVVAEAEDGEEALELALRHRVDVLFVDLSMPIMDGLTLMKYARE 74 Query: 92 SYPPVHYIAT---DNYALVESAF-----LHLKE----KGVNRFAFYGLPESSGKRWATER 139 P H I D ++ + A +L + + + + ++ + Sbjct: 75 KLPNCHMIVITGYDEFSYAQEAIRLQVDDYLLKPTDPQRLREVVAKVKEKLEQEQKEKQY 134 Query: 140 EYAFRQLVAEEKYRGVVYQGLETAPENWQHA----QNRLADWLQTLPPQTGIIAVTDARA 195 V + + G+E Q L ++ P Q +I + Sbjct: 135 RELLTNQVQKHIHVLRQQFGMEWVAGRLTEEDIMGQLSLLGLSRSCPAQVVVIQWFSFKN 194 Query: 196 RHIL--QVCEHLHIPVPEKLCVIGIDN--------EELTRYLSRVALSSVAQGARQMGYQ 245 + I+ + + L + + + + D E +S +S + + Sbjct: 195 QPIVSDRDRQLLLFAIEKAVSELLGDGEKIVFRDSNEFIVVISWKPISEEQCRQMETALK 254 Query: 246 AAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACK-GIKV 304 + + E + + V + S P V +A YI+ H + + + Sbjct: 255 QHLHIRASVYIETVEGGMVGVATAYEKCKEQMVEESRLSPIVRRARQYIQKHFSQSDLTL 314 Query: 305 DQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPS 364 + V + + +S L + K+E+G + ++ ++EKA LL+ST L I+EI++ GY + Sbjct: 315 ESVAEFLNVSPVYLSRMIKQELGISFIHLLTKIRMEKAAELLLSTELPIHEIAERVGYDT 374 Query: 365 LQYFYSVFKKAYDTTPKEYRDVN 387 YF + FKKA +P +YR Sbjct: 375 QHYFSTAFKKAMGVSPNQYRRTR 397 >UniRef50_A4XJL7 Transcriptional regulator, AraC family n=2 Tax=Clostridia RepID=A4XJL7_CALS8 Length = 291 Score = 162 bits (409), Expect = 3e-38, Method: Composition-based stats. Identities = 39/157 (24%), Positives = 75/157 (47%), Gaps = 9/157 (5%) Query: 229 RVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVI 288 + + + + + + + L +LD + + IL + I S+ + Sbjct: 130 PLDIEAARRSFFNLTHIDHEKLQSVLDMMHIVAKYILDSEMIRISSLSS---------IE 180 Query: 289 QAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLIS 348 + + YI+NH + I +D + V +S + L FK+++G T + +L+K++ L+ + Sbjct: 181 KIIEYIKNHYMEDITLDDLAKMVYLSPTYLSYLFKKQLGITFKEYLINIRLKKSKELIET 240 Query: 349 TTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRD 385 T LSI EIS+M G YF +FKK + +P Y+ Sbjct: 241 TDLSIGEISKMVGIEDQNYFSRLFKKKFGVSPLNYKK 277 >UniRef50_C9RT55 Two component transcriptional regulator, AraC family n=4 Tax=Bacillales RepID=C9RT55_GEOSY Length = 259 Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats. Identities = 33/197 (16%), Positives = 80/197 (40%), Gaps = 1/197 (0%) Query: 192 DARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLH 251 + +L+ P + + + + + + + + + + Sbjct: 62 EITGLEVLEGMRENEDS-PVVIIISAYPDFDYAQKAISLGVLNYLLKPVKKSELFEAVER 120 Query: 252 RLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAV 311 + E+ +R++ + + D T + +A+ +I I + V + V Sbjct: 121 AIHVSEQKERERVMKQLIDDKLINALDRHPQTREPIREAIQFIDQRLKDDISLKDVAEHV 180 Query: 312 GISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSV 371 ++ S FKE++ T + ++++A+ LL++T +++ EI++ CGY + +YF + Sbjct: 181 HLNPSYFSTLFKEQMQLTFSEYLTRRRMQRAKELLMTTDMTVAEIAEECGYRTAKYFIHL 240 Query: 372 FKKAYDTTPKEYRDVNS 388 FK+ TP YR Sbjct: 241 FKEMEGKTPSSYRKSQK 257 >UniRef50_A5Z5Z2 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z5Z2_9FIRM Length = 533 Score = 161 bits (408), Expect = 4e-38, Method: Composition-based stats. Identities = 42/264 (15%), Positives = 92/264 (34%), Gaps = 2/264 (0%) Query: 124 FYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQTLPP 183 G + RE A+ A K + + + +L ++ L Sbjct: 272 CVGNGYEDHTKVPNSREEAYSSAWARMKQGTRKVLYYKKTFDIHVSYKQKLERIVEQLKS 331 Query: 184 QTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMG 243 + V + ++++ L V + + + ++ Sbjct: 332 TADTLNVDEFH--NMIKQLFDLPDYVLTEYNSRNYLMNFVDTFFEINGKVLAEHMNVEVE 389 Query: 244 YQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIK 303 + K + E + + ++ + + D + +A+ YI+ + K I Sbjct: 390 KEYIKKILNYSRTLEDYQKNLEHKFDQMFKILADDAEKQNFRPLRKAIKYIKENYDKQIT 449 Query: 304 VDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYP 363 + + + V +S FK++ G+ + I ++E A+ +L T +I EI+ G+ Sbjct: 450 AETLAEVVNLSPVYFSHLFKKQTGKNMTDYITEYRMEIAKKMLFDTDKTIFEIAVAVGFQ 509 Query: 364 SLQYFYSVFKKAYDTTPKEYRDVN 387 +YF FK+ TP EYR + Sbjct: 510 DQRYFSKRFKQIVGKTPSEYRKLK 533 >UniRef50_A4XMF1 Two component transcriptional regulator, AraC family n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XMF1_CALS8 Length = 518 Score = 161 bits (408), Expect = 4e-38, Method: Composition-based stats. Identities = 34/182 (18%), Positives = 78/182 (42%), Gaps = 3/182 (1%) Query: 213 LCVIGIDN--EELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVR 270 + V G +N ++ + + + L + A + + L L+ + Sbjct: 337 VEVFGENNLKYKMIKLIIMLLLETGAINKEESFDIEKVITEILNADAHRILETSKRAILA 396 Query: 271 VI-ERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGET 329 + + T + + + ++ +A+ +I + + I + Q+ + K FK+ G + Sbjct: 397 LFGNAKVTHEQIIHNDSINKAIDFINQNYNQEISLAQISAIFNFNPYYFSKLFKKYTGVS 456 Query: 330 IHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSE 389 + +++KA LL +++ SI EI+ M G+ YF FKK TP +R++ + Sbjct: 457 YKTYLTKLRIQKACELLKNSSKSIKEIAFMVGFSDPNYFIKAFKKFVGVTPSFFRNMPEQ 516 Query: 390 VM 391 ++ Sbjct: 517 LI 518 >UniRef50_C5RL17 Transcriptional regulator, AraC family n=2 Tax=Clostridium cellulovorans 743B RepID=C5RL17_CLOCL Length = 282 Score = 161 bits (408), Expect = 4e-38, Method: Composition-based stats. Identities = 41/189 (21%), Positives = 83/189 (43%), Gaps = 13/189 (6%) Query: 210 PEKLCVIGIDNEELTRYLSRVALSSVAQGAR-------QMGYQAAKLLHRLLDKEEMPLQ 262 P + + ++L ++ LSS + +Q + + + Sbjct: 87 PWTYAWVEFNGRLSEKFLHQIGLSSKTPVFSCKKKDLLEASFQYIFDACKKSRNNNLLIL 146 Query: 263 RILVPPVRVI------ERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRS 316 L + +I E+ + L D + QAM +I + + + + ++ + ++R+ Sbjct: 147 SSLYHFLAMIHEASAPEQTEKNTEKLKDYYIHQAMIFIEKNYYRNLCISEMAKYLSLNRN 206 Query: 317 NLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAY 376 + FKE VG T A + +++KA+ L+ +++L+I EIS + GY F +FKK + Sbjct: 207 YMSTLFKESVGITPQAYLINYRMDKAKELMKNSSLTIGEISSLVGYNDPLMFSRMFKKLF 266 Query: 377 DTTPKEYRD 385 PK YR+ Sbjct: 267 GIPPKNYRN 275 >UniRef50_C4Z3B2 Two-component system, response regulator YesN n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z3B2_EUBE2 Length = 514 Score = 161 bits (408), Expect = 4e-38, Method: Composition-based stats. Identities = 38/143 (26%), Positives = 73/143 (51%), Gaps = 1/143 (0%) Query: 245 QAAKLLHRLLDKEEMP-LQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIK 303 + + + RL E+ + I+ + ++E+ + + + +YI NH + I Sbjct: 368 EFGREIDRLYKSEDFSCIMDIVNNYIDLLEKSFGKEPATSHREIETVKNYIHNHYGEEIG 427 Query: 304 VDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYP 363 Q+ D V ++ S L FK+E G+ + I ++EKA+ LL T + I IS+ GYP Sbjct: 428 AQQLADMVYLAPSYLSSLFKKETGQNLSKYIKQYRMEKAKELLTGTNMKIVNISEQVGYP 487 Query: 364 SLQYFYSVFKKAYDTTPKEYRDV 386 ++ YF F++ + +P+++RD Sbjct: 488 NVSYFVQSFREYFGISPQKFRDQ 510 >UniRef50_C9KND9 Transcriptional regulator, AraC family n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KND9_9FIRM Length = 298 Score = 161 bits (408), Expect = 4e-38, Method: Composition-based stats. Identities = 42/204 (20%), Positives = 75/204 (36%), Gaps = 11/204 (5%) Query: 200 QVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQG---ARQMGYQAAKLLHRLLDK 256 Q P + + ++ + LS ++ G + A + +L Sbjct: 75 QTTYESDAKEPWTYIWVAFNGSRAAEIIASLRLSQADPIYTCTKEQGAKLAAYVQDMLAH 134 Query: 257 EEMPLQR------ILVPPVRVIERRSTD--YRSLTDPAVIQAMHYIRNHACKGIKVDQVL 308 L +L+ + V+ D + + + ++IR H + V ++ Sbjct: 135 NSFTLSGRYYRLGLLMQFLSVLAEAQRDLLPPADNNAYISHMTNFIRTHLEEPFTVQELA 194 Query: 309 DAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYF 368 D + ++RS + FK + + H I +L KAR LL +TT S+ I+ CGY F Sbjct: 195 DYMNLNRSYVTTLFKRYLHCSPHEYIQNCRLTKARHLLETTTFSVESIAYSCGYAKSDSF 254 Query: 369 YSVFKKAYDTTPKEYRDVNSEVML 392 F + TP YR L Sbjct: 255 QRAFLRKAGMTPTAYRRQQQSSYL 278 >UniRef50_B8HZZ5 Two component transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=B8HZZ5_CLOCE Length = 519 Score = 161 bits (407), Expect = 5e-38, Method: Composition-based stats. Identities = 37/191 (19%), Positives = 76/191 (39%), Gaps = 1/191 (0%) Query: 200 QVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEM 259 + + ++ G+ + +A + + + G A L L+ + Sbjct: 327 EAAKEYLKKYINEVKTSGVSKSVAEQKFYDLASAFYWEYLKTTGNSADGRLETLISTLQT 386 Query: 260 P-LQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNL 318 L+ V I + + + A +I + + V + + ++R+ Sbjct: 387 NDLENCCVFTEMFIVKLMYTNKKQMHEIIEAATVFINKRLTEDLTVFTLAEQFHVARNYF 446 Query: 319 EKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDT 378 + FK+E+GE + I +++EKA+ LL + L E+++ GY YF FKK Sbjct: 447 SRLFKKEMGEGCNEYITRKRIEKAKHLLTVSRLKTYEVAEQVGYNDTNYFSLAFKKNTGM 506 Query: 379 TPKEYRDVNSE 389 +P E+RD + Sbjct: 507 SPTEFRDRQNN 517 >UniRef50_C1P7P5 Transcriptional regulator, AraC family n=1 Tax=Bacillus coagulans 36D1 RepID=C1P7P5_BACCO Length = 292 Score = 160 bits (406), Expect = 6e-38, Method: Composition-based stats. Identities = 41/171 (23%), Positives = 79/171 (46%), Gaps = 9/171 (5%) Query: 219 DNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTD 278 D L +L ++ A +G + L +L++E P + Sbjct: 129 DFAAAYSKLPVFSLEKLSASAEVLGTLSEYYLSSVLNEEAKPAKE---------STAQVK 179 Query: 279 YRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEK 338 + + + QA+ YI+ H + + +++V V +S K FK+E GET + ++ +K Sbjct: 180 KHASSKKEIKQALQYIQKHIHQPVTLEEVAGHVYLSPYYFSKLFKKETGETFVSFVNRQK 239 Query: 339 LEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSE 389 + A+ +L + L ++ I+ G+ + YF VFK+ Y TTP YR ++ + Sbjct: 240 MNLAKDMLANDDLPVSYIAHSLGFREISYFSKVFKRYYQTTPTSYRAMSRK 290 >UniRef50_C4ZBY2 Two-component response regulator n=4 Tax=Clostridiales RepID=C4ZBY2_EUBR3 Length = 534 Score = 160 bits (405), Expect = 8e-38, Method: Composition-based stats. Identities = 39/195 (20%), Positives = 79/195 (40%), Gaps = 3/195 (1%) Query: 197 HILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDK 256 ++ + + L + EL L +S+ A+++ +L + L + Sbjct: 338 QAVEAYMQHNFMSQQSLENYHVAVMELISELYHF-MSNNELNAQEISGSVGRLYNELSNF 396 Query: 257 EEMPLQRILVPPV-RVIERRSTDYRSLTDPAVIQAMHYIRNHACK-GIKVDQVLDAVGIS 314 E + L++ L+ R+ + + + + A Y+ + + +D +G+S Sbjct: 397 EPVVLKQWLLDFSSRLHDDMADARYNSKKSLIDSAKDYVHRNYRSVDLGLDDTCKELGVS 456 Query: 315 RSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKK 374 S FK+E G + + +++KA +L+ T I+Q GY YF VFK+ Sbjct: 457 NSYFSSLFKKETGSSFVEYLTDYRMDKAARMLVETDDKSYVIAQNVGYADPNYFSYVFKR 516 Query: 375 AYDTTPKEYRDVNSE 389 Y +P YR + Sbjct: 517 KYGVSPSRYRTEYEK 531 >UniRef50_C6CVC0 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CVC0_PAESJ Length = 539 Score = 160 bits (405), Expect = 9e-38, Method: Composition-based stats. Identities = 35/132 (26%), Positives = 59/132 (44%) Query: 259 MPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNL 318 L I R + R AV +A YI H + + + + D V +SR+ + Sbjct: 408 RELSGWARSVFHQIMDRISARRPQYGEAVERACEYITLHYAEDLMLQDIADHVHLSRTYI 467 Query: 319 EKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDT 378 + FK+E G + + ++EKA+ LL TL + + + + GY + YF +FK Sbjct: 468 SELFKKETGMNYNEYLMQVRMEKAKELLKRQTLKVADAAALVGYSNTSYFIKLFKNYTGL 527 Query: 379 TPKEYRDVNSEV 390 +P EY + V Sbjct: 528 SPSEYMEQQRSV 539 >UniRef50_A7B7P4 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B7P4_RUMGN Length = 253 Score = 160 bits (405), Expect = 9e-38, Method: Composition-based stats. Identities = 42/190 (22%), Positives = 81/190 (42%), Gaps = 11/190 (5%) Query: 210 PEKLCVIGIDNEELTRYLSRVALSSVAQGAR-QMGYQAAKLLHRLLDK------EEMPLQ 262 P +GI + +YL LS+ A + ++ E+ +Q Sbjct: 62 PWSYLWVGIGGHDAEKYLRLAGLSARNPIFSCTQIDTAKSYILDMMKHHALSAANEIYIQ 121 Query: 263 RILVPPVRVIERRS----TDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNL 318 IL+ + ++ + + ++ + + QA+ YI + + V ++ D + ++RS L Sbjct: 122 GILMQFLALLVEDAGCTVSPQQNTSSVYINQAISYIHKNYQNPLTVQEIADYLSLNRSYL 181 Query: 319 EKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDT 378 + F + V + + ++ K+ LL S++LSI I+ CGY S F F+K Sbjct: 182 TELFLKTVQLSPQQFLTRYRITKSEELLQSSSLSIQNIAYSCGYSSSFSFSKAFRKVNGL 241 Query: 379 TPKEYRDVNS 388 +P EYR Sbjct: 242 SPSEYRKQKR 251 >UniRef50_A6TRZ8 Response regulator receiver protein n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TRZ8_ALKMQ Length = 529 Score = 160 bits (405), Expect = 9e-38, Method: Composition-based stats. Identities = 39/163 (23%), Positives = 67/163 (41%), Gaps = 3/163 (1%) Query: 225 RYLSRVALSSVAQGARQMG-YQAAKLLHRLLDKEEMPL--QRILVPPVRVIERRSTDYRS 281 R + + L G K L +LL + + L +I ++ Sbjct: 362 RLIELLILMKRNIPYEMKGKLDDEKYLIQLLKIDNIKELKNSYLNYIRSIIFSIEEIRKN 421 Query: 282 LTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEK 341 + + +A+ +I+ H + I ++ V + +S K FKE G+ + K+E+ Sbjct: 422 ELNGLITKALAFIQKHYNENICLNDVAQEINMSYHYFSKFFKESTGKNFVDYLTELKIER 481 Query: 342 ARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 ++ LL + ++SI EI GY YF FKK TP YR Sbjct: 482 SKELLKNQSISIKEICYEIGYSDPNYFSKAFKKITGVTPTAYR 524 >UniRef50_C6CT66 Two component transcriptional regulator, AraC family n=2 Tax=Bacillales RepID=C6CT66_PAESJ Length = 262 Score = 160 bits (404), Expect = 9e-38, Method: Composition-based stats. Identities = 50/243 (20%), Positives = 94/243 (38%), Gaps = 8/243 (3%) Query: 148 AEEKYRGVVYQGLETAPENWQHAQN-RLADWLQTLPPQTGIIAVTDARARHI--LQVCEH 204 E R V+ E + +WL+ + +TD R I L++ E Sbjct: 13 TREGVRKVLESWSAGRYEITTSSSAVEALEWLKANE---ANLVITDIRMPEINGLELVEK 69 Query: 205 LHIPV-PEKLCVIGIDN-EELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQ 262 L P + VI + + + + +EE+ Sbjct: 70 LRDRQHPPVVIVISGHPQFDYAHKALQFGVIEYLLKPLDKKKLVEAVELAFRKEEELNRI 129 Query: 263 RILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRF 322 + V +T+ + V +A+ Y+ H + + + + D + ++ S F Sbjct: 130 ERMERFVDTKLLETTEQETQYSAPVKEAIQYLEEHLHEPVTMRDIADHLHMNASYFSVLF 189 Query: 323 KEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKE 382 KE+ G T + ++++A+ LL +T LSINEI++ GY + +YF VF+ +P + Sbjct: 190 KEQTGLTFSDYLTRRRVQRAKELLTNTRLSINEIAEKAGYQTAKYFVKVFRSHEGVSPGQ 249 Query: 383 YRD 385 YR Sbjct: 250 YRK 252 >UniRef50_UPI0001C36936 two component transcriptional regulator, AraC family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C36936 Length = 527 Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 39/147 (26%), Positives = 70/147 (47%) Query: 240 RQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHAC 299 R+ G +L+ R++ + + + + P + +A+ YIR H Sbjct: 369 RETGNGIQELICRIISMKSRHRIQDIAREYLASTAPLIESAKSRSPVIDRALVYIREHYS 428 Query: 300 KGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQM 359 + I + + + + + L + FKE+VG+T + ++E A+ L + L I +I QM Sbjct: 429 ENITLQSLAEDIYLHPVYLSRLFKEKVGQTFLEYLTHYRIEMAKDYLRNPNLRIYDIGQM 488 Query: 360 CGYPSLQYFYSVFKKAYDTTPKEYRDV 386 GY + QYF VFK+ TTPK +R+ Sbjct: 489 VGYETPQYFSRVFKELTGTTPKGFREE 515 >UniRef50_C5ETL2 Two component transcriptional regulator n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ETL2_9FIRM Length = 517 Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 35/159 (22%), Positives = 69/159 (43%), Gaps = 4/159 (2%) Query: 232 LSSVAQGARQMGYQAAKLLHRLLDKEEM----PLQRILVPPVRVIERRSTDYRSLTDPAV 287 L + Y + L E +++ + ++ +++ + Sbjct: 359 LLDTIREIDGTAYTQMQNADLLSKCTEAVTLREMEQSYRDGLALLCSPRRMKEDISNYTI 418 Query: 288 IQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLI 347 +A++YIR H +GI +++V +GI+ L F E+GE + ++ A+ LL Sbjct: 419 KRAINYIREHYKEGISLEEVAGRLGITPEYLSTLFNREMGENFSTFLRKFRISHAKRLLK 478 Query: 348 STTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDV 386 T + + EI++ GY +YF VFK+ +P +YR Sbjct: 479 GTDMKVYEIAEEVGYTDPKYFARVFKEELGISPGDYRQQ 517 >UniRef50_C0C2A1 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C2A1_9CLOT Length = 536 Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 40/221 (18%), Positives = 86/221 (38%), Gaps = 33/221 (14%) Query: 170 AQNRLADWLQTLPPQTGIIAVTDARARHILQVC--EHLHIPVPEKLCVIGIDNEELTRYL 227 + L L P + G + + + L + +I +P++ EL ++L Sbjct: 347 EMDDLERKLSESPAKDGRLVASVYKEVLTLFYFGTHNYNIEIPDQY-------PELLKHL 399 Query: 228 SRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAV 287 + A GY ++H L+ + + + + Sbjct: 400 EVLGTIHEA-----AGYLKRYMVHSLMH-------------------WIEEKKYVESRPI 435 Query: 288 IQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLI 347 A +I + + ++ V +G + + FK+E G+ + ++E A+++L+ Sbjct: 436 RLARQFIGENYYLPLTLETVSREIGFNPTYFSGMFKKETGKNFSDYLKEIRIENAKNMLL 495 Query: 348 STTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNS 388 +T + +IS GY ++YF +FKK TP E+R + + Sbjct: 496 NTEQQVEDISFAVGYSDIKYFSRLFKKQTGVTPTEFRRLYN 536 >UniRef50_UPI0001851370 two component AraC family transcriptional regulator n=1 Tax=Bacillus coahuilensis m4-4 RepID=UPI0001851370 Length = 253 Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 51/236 (21%), Positives = 89/236 (37%), Gaps = 15/236 (6%) Query: 168 QHAQNRLADWLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDN-----EE 222 + L W + L + A +A I++ I K+ V+G E Sbjct: 13 REGIRLLGRW-EELQITEIVEAENGQQAVQIIETSSPEIIITDMKMPVMGGGKLLEWLNE 71 Query: 223 LTRYLSRVALSSVAQGARQMGYQAAKLLHRLLD-KEEMPLQRILVPPVRVIERRSTDYRS 281 R+ L+ Q LL + L +L V ++ + Sbjct: 72 TECPSIRIVLTGFDQYEYMRKAVQHGSFDYLLKPIDPDLLHEVLTKAVSAVQLQQPKGEV 131 Query: 282 LTDPA--------VIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAM 333 + + + + Y++ + + IK+ + D ISR + ++FKE TI Sbjct: 132 VAEDYKDQTITITMRKVEEYLKEYYHEDIKLQDIADTFYISREYISRKFKEHFHLTITDY 191 Query: 334 IHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSE 389 + +++KA LL T L + EI++ GY +YF VFKK TP +YR + Sbjct: 192 LVDLRMKKAMELLDRTNLKVYEIAEKVGYVDDKYFRKVFKKFAGVTPNDYRQKDKN 247 >UniRef50_A6TKQ3 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TKQ3_ALKMQ Length = 282 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 43/208 (20%), Positives = 83/208 (39%), Gaps = 9/208 (4%) Query: 189 AVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAK 248 A T R +L + + P + ++ D + LS+ Q + + Sbjct: 77 ADTQDHVRVLLNFSKDYLLSSPYVIALL--DGLFMNNNYVIPFLSAEQQYVEVLLDKMIH 134 Query: 249 LLHRLLDKEEMPLQRILVPPVRVIERRSTDYR-------SLTDPAVIQAMHYIRNHACKG 301 + ++ LQ +L+ + R R S + Q + YI + Sbjct: 135 EIEHQSTGFQVALQALLMDLLVYTSRYIESNRHDVLAPPSQVHEKISQIVQYINTNYQTP 194 Query: 302 IKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCG 361 + + V +S+ L + FK+ G T I+ ++ +A+ LL T + +IS+ G Sbjct: 195 LTLSSVAQNFFVSQYYLSRTFKQATGFTFVEYINNIRIREAQRLLRETNHKVIDISEAVG 254 Query: 362 YPSLQYFYSVFKKAYDTTPKEYRDVNSE 389 + S+ +F VFK+ +P YR +N+E Sbjct: 255 FGSISHFGRVFKEVTRFSPLNYRRLNTE 282 >UniRef50_C6CXU8 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CXU8_PAESJ Length = 529 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 54/270 (20%), Positives = 99/270 (36%), Gaps = 16/270 (5%) Query: 124 FYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQTLPP 183 F G+ K + ++ + + Y + + + + + + + Sbjct: 266 FIGIGSPYLK--QDQYVLSYHEALLASG-DTQGYTKVRYFADMQKSDKKPQQAFSREVEK 322 Query: 184 QTGIIAVTDARARHIL----QVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGA 239 I+A+ A L Q E L L VI + E+L ++ ++ S Sbjct: 323 SL-IMALRKADKELTLSVFDQYLEQLFQNARYDLRVIKYELEKLFDFIVQMLNESGFSMH 381 Query: 240 RQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHAC 299 + L E++ + V +I + + Y + + +A YI +H Sbjct: 382 HVGDLEH-------LHSEQLIREFAKYQIVLLINQVTNWYNLDSRGNMEKAKSYITDHYA 434 Query: 300 KGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLL-ISTTLSINEISQ 358 + ++ V D V ++ K F E G T + ++ KA+ LL S+ EIS Sbjct: 435 DDLSLEVVADYVQLNPHYFSKLFHERCGITFVDYLTQVRISKAKELLAADFEQSLKEISM 494 Query: 359 MCGYPSLQYFYSVFKKAYDTTPKEYRDVNS 388 GY YF VFKK +P E+R +S Sbjct: 495 RVGYRDPNYFSRVFKKLTGLSPSEFRQTHS 524 >UniRef50_C0CVY3 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CVY3_9CLOT Length = 529 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 41/133 (30%), Positives = 61/133 (45%) Query: 253 LLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVG 312 L EE ++ V + + + D + +A YIR + K I +++V VG Sbjct: 391 LAAGEEETARQKFVAAMVELAQAVVIKNQEPDGIITRAQDYIRQNFRKDISLEEVARTVG 450 Query: 313 ISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVF 372 IS K FKEE G + ++E A+ LL LSI ++ GY + YF +F Sbjct: 451 ISPYYFSKLFKEEAGMNFTEYLTGIRIETAKRLLSERELSIKQVCVDSGYANPNYFSRIF 510 Query: 373 KKAYDTTPKEYRD 385 KK TP E+RD Sbjct: 511 KKWVGITPTEFRD 523 >UniRef50_C6IY76 Two component transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IY76_9BACL Length = 501 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 58/296 (19%), Positives = 108/296 (36%), Gaps = 36/296 (12%) Query: 117 KGVNRFAFYGLPESSGKRWATEREY---AFRQLVAEEKYRGVVYQGLETA-------PEN 166 +G GLP S ++ Q AE K + E+A Sbjct: 218 RGFTDRLRAGLPASRILAGSSSAYRDPACLSQAYAEAKRACELGVYGESAWNYHPVTELP 277 Query: 167 WQHAQNRLADWLQ----TLPPQTGII--AVTDARARHILQVCEHLHIPVPEKLCVIGIDN 220 + + +++W L Q I+ A T A + + V Sbjct: 278 EREPKAEISEWFAGYRDELSQQLQILDIAWTTACLERLFEQLRQNRASV----------- 326 Query: 221 EELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRI-------LVPPVRVIE 273 EL + R+ L + A + ++ ++L+ + R + V++ Sbjct: 327 -ELVLLVCRLMLETAAAELHEWSKLQSQASVKMLETKLSSCLRFHDMQTTFIAEFTGVLK 385 Query: 274 RRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAM 333 + + +V +I H + ++ + V ++ S L KRFK E G TI Sbjct: 386 QIRDARLAQAGKSVETVKRWIAEHYDQPAELSHLASLVYLTPSYLSKRFKSETGMTITDY 445 Query: 334 IHAEKLEKARSLLIS-TTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNS 388 + +++KA+ LL L ++E+ + GYP YF +FK+ TP EY+ ++ Sbjct: 446 LIEVRIKKAKQLLRQANDLKVHEVGSVVGYPDPAYFNKLFKRIVGVTPNEYKRLSQ 501 >UniRef50_A9KIW0 Transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KIW0_CLOPH Length = 300 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 39/187 (20%), Positives = 78/187 (41%), Gaps = 8/187 (4%) Query: 210 PEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPL---QRILV 266 P + V+GI+ + L + + + L H + ++ Q +L Sbjct: 110 PMEYIVLGIEGIKFQAEDQGYILLNSSAHKSDLHLYFNSLAHEMKSEQPYRNFVCQNLLN 169 Query: 267 PPVRVIERRSTDYRSLTD-----PAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKR 321 +I R S+ A YI + + I ++ + V +++ Sbjct: 170 IIFTMILRNDAFKISIVSGPKLTRECNIAKKYIEENYQENITIETLSSLVHLNKYYFVHN 229 Query: 322 FKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPK 381 FK++ G + + ++E++ LL+ST S++ ISQ+ G+ S YF FK+ + TP+ Sbjct: 230 FKKQFGTSPINYLIKRRIEESMHLLVSTNHSLSSISQIVGFSSPSYFSQAFKRMTNITPQ 289 Query: 382 EYRDVNS 388 EY+ + Sbjct: 290 EYKKMYK 296 >UniRef50_A5Z5R3 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z5R3_9FIRM Length = 509 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 38/170 (22%), Positives = 72/170 (42%), Gaps = 3/170 (1%) Query: 217 GIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRS 276 + N YL L L + L+ I+ + ++ + Sbjct: 339 SVKNICTQIYLISYRLVMSTYNLPMDEKYVKML---TESSDIFQLKSIVSDMINDLQIQL 395 Query: 277 TDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHA 336 T + ++++YI+ H + ++Q+ + I+ S + FK+E G ++ + I+ Sbjct: 396 TQSVKKYSSFIEESLNYIKEHLEDDLSLEQIAQHIHINESYFSRTFKKECGNSVISYINN 455 Query: 337 EKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDV 386 ++ KA+ LL ++ L EIS+ G YF +FKK +PK YRD Sbjct: 456 LRINKAKELLATSNLKTFEISEAVGIHDPAYFSVLFKKNTGMSPKAYRDQ 505 >UniRef50_B9XAQ1 Transcriptional regulator, AraC family n=2 Tax=Verrucomicrobia RepID=B9XAQ1_9BACT Length = 326 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 37/154 (24%), Positives = 71/154 (46%), Gaps = 1/154 (0%) Query: 234 SVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIER-RSTDYRSLTDPAVIQAMH 292 V + + Y K++ + + L I + ++ R+ P + +A Sbjct: 170 EVDKDRLRQAYFDTKVVSTRQHEAIVSLLEIFAQHISLVSNWVLVQERNAEPPVIARAKR 229 Query: 293 YIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLS 352 YI ++ + + + +V AV S K FK+ G + ++EKA++LL++ L Sbjct: 230 YIEDNQAEDLTLSEVAKAVNTSTFYFCKMFKKATGLHFTEYVSRVRIEKAKNLLLNPNLR 289 Query: 353 INEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDV 386 ++E++ G+ SL +F VFKK +P EYR+ Sbjct: 290 VSEVAFEVGFQSLTHFNRVFKKIVGQSPTEYREQ 323 >UniRef50_C6J7M7 Response regulator n=2 Tax=Bacillales RepID=C6J7M7_9BACL Length = 531 Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 47/264 (17%), Positives = 101/264 (38%), Gaps = 26/264 (9%) Query: 136 ATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHA------------QNRLADWLQTLPP 183 A++ R + + + + L D ++TL Sbjct: 277 LERLSEAYQSATRALYQRFYSDRAGVFIDQPSREPGADREAKYPKHLEAVLLDSIRTLNR 336 Query: 184 QTGIIAVTDARARHILQVCEHLHIPVPE--KLCVIGIDNEELTRYLSRVALSSVAQGARQ 241 + +++ D +++ + +L V+ E LS +L + Q + Sbjct: 337 E-RLLSALDETKQYLEEQAFSKEAAERMIVELTVVMFRQYEQMHLLSEWSLEGLLQELQS 395 Query: 242 MGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKG 301 +G L ++ + R + E R + + + + YI ++ K Sbjct: 396 LG-----TLSEMIGLLKANFGR------WISESRESQIKDNVQNVIAKTQEYILSNYHKD 444 Query: 302 IKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCG 361 + +++V + +S S+ FK+ G T + ++EKA+ +L ++ + + +++ M G Sbjct: 445 LSMEEVAERADLSISHFCLLFKQVTGYTFLEYLTECRIEKAKYILKNSQVKVYQVAPMVG 504 Query: 362 YPSLQYFYSVFKKAYDTTPKEYRD 385 Y +YF VFKK TP EYR+ Sbjct: 505 YQDPRYFTQVFKKVTGMTPTEYRE 528 >UniRef50_A9WH32 Sensor protein n=2 Tax=Chloroflexus RepID=A9WH32_CHLAA Length = 1202 Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 44/180 (24%), Positives = 76/180 (42%), Gaps = 6/180 (3%) Query: 217 GIDNEELTRYLSRVA-LSSVAQGARQMGYQAAKLLHR----LLDKEEMPLQRILVPPVRV 271 G ++ R R+ + + R + + LL++ +L K L Sbjct: 1023 GFTLLQMMREDQRLREIPVIVITGRMLSEEDMALLNQGVTTILSKGIFSADETLAHLQAA 1082 Query: 272 IERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIH 331 +ERR V +AM YI +H + + VG+S L F++E+G T Sbjct: 1083 LERRRRLSDQAQ-MLVRKAMAYIHSHYTHPLTRQDIAHYVGMSEDYLTHCFRQELGTTPV 1141 Query: 332 AMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSEVM 391 ++ ++ +AR LL + SI I+ G+ S YF VF+K +P+EYR + + Sbjct: 1142 EYLNRYRVLQARHLLAESDKSITNIALEVGFSSSSYFSRVFRKEVGQSPEEYRRLKQSSV 1201 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 58/227 (25%), Positives = 90/227 (39%), Gaps = 15/227 (6%) Query: 55 WLGDGVIA-----DFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVES 109 W G+I + Q+ QA+ D P++ VG P I +N + Sbjct: 87 WNTHGLIIINPLQRPERSQMVQAIRDAGHPVIFVGSGE-------PGPTIVANNAGGIYL 139 Query: 110 AFLHLKEKGVNRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQH 169 A HL E G + AF E + +R AF +A + + + Sbjct: 140 ALQHLIEHGHRQIAFIAGSEHDLEGDTGDRLRAFHSSMARFGLEVDE-RLIAFGRHVFTG 198 Query: 170 AQNRLADWLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSR 229 + L T P T ++A D A + + VP+ + +IG D+ L+ Sbjct: 199 GYTAMRQLLATGVPFTAVLASNDESALGAISALQEAGYRVPDDIAIIGFDDRP-EGLLAE 257 Query: 230 VALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRS 276 AL+SV +MGYQA KL+ L E +PL ++ P R+I R S Sbjct: 258 PALTSVQIPLFKMGYQALKLMVHHLR-ERVPLPELVQVPTRLIIRES 303 >UniRef50_C5ENT8 Two component transcriptional regulator n=2 Tax=Clostridiales RepID=C5ENT8_9FIRM Length = 529 Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 48/237 (20%), Positives = 91/237 (38%), Gaps = 16/237 (6%) Query: 167 WQHAQNRLADWLQTLPPQTGIIAVT--DARARHILQVCEHLHIPVPEKLC------VIGI 218 W+ L+T+P +G+ D + + + L++ + C V+G+ Sbjct: 294 WERLMEGTGRLLETVPAGSGLEKQNLLDRYMKLMEHSVDTLNLEEAGEACGMLEREVLGL 353 Query: 219 DNE------ELTRYLSRVALSSVAQGA-RQMGYQAAKLLHRLLDKEEMPLQRILVPPVRV 271 + EL R+ ++ A ++ A + + Q + + Sbjct: 354 ERICGREILELVLSAGRLFIARTALNHVEEIQQDFAACCSQCSTVGGLFGQLKQIQARLL 413 Query: 272 IERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIH 331 E R P + A Y+ H + I ++ V + +G S + FK E GE Sbjct: 414 SEARDLRSNEAARP-IRIAKQYVMQHYQEPITLETVCEDIGFSVNYFSTLFKRETGEGFA 472 Query: 332 AMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNS 388 + ++E+A++LL T+L + EI + GY ++F F K P EYR + Sbjct: 473 KYLTRVRMEEAKTLLRETSLPVAEICEKVGYSDRKHFTHTFHKDTGLNPAEYRKLYG 529 >UniRef50_C6D490 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D490_PAESJ Length = 527 Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 42/234 (17%), Positives = 87/234 (37%), Gaps = 7/234 (2%) Query: 153 RGVVYQGLETAPENWQHAQNRLADWLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEK 212 ++ + + +L L+ L + GI + D I + E P Sbjct: 297 HPEIHNLTGRSEPVPEEMITKLEAALENLDEKEGISIIRD-----IFRKMEARSGMSPTD 351 Query: 213 LCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVI 272 L + ++ L + +++ + Q + + E + + ++I Sbjct: 352 LQLQCLNI--LLSSVRKMSFRQLQQNDFLGRHILSLEGMSRFQTLESLEEWMAQVIRKII 409 Query: 273 ERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHA 332 + + + Y+ H + I + + IS L + FK++ G+T Sbjct: 410 VFKQEHNIPKKKDIIAEVKEYVAEHYSEPITLADLSARFFISPYYLSQFFKQKTGDTYVN 469 Query: 333 MIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDV 386 + ++ KA+ LL T L + E+ QM GY Q+F +F+K P++YR Sbjct: 470 FLTRIRINKAKELLERTDLKVYEVCQMVGYSDTQHFARMFEKLTGYKPRDYRKR 523 >UniRef50_C6LII8 Two-component response regulator n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LII8_9FIRM Length = 502 Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats. Identities = 38/170 (22%), Positives = 70/170 (41%), Gaps = 3/170 (1%) Query: 222 ELTRYLSRVALSSVAQGARQMGYQAA---KLLHRLLDKEEMPLQRILVPPVRVIERRSTD 278 E L R + A+ G L ++ + + R ++ + Sbjct: 333 ESLCGLCRDTFELLEFEAKGNGISLTGTDILREQMEECISLEEARRIMEAFAGQCHLTEL 392 Query: 279 YRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEK 338 + + A+ YI H + + ++QV +V ++ + FK E G+T + + Sbjct: 393 QNAPKSKNIQLAVEYINAHYAEQLSLEQVAASVYLNPDYFSRAFKMETGQTFVNYLTDVR 452 Query: 339 LEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNS 388 L ++ LL +T L + I+Q GY + YF ++FKK Y +P EYR Sbjct: 453 LSRSVWLLENTALRVQMIAQQVGYYNASYFSTIFKKKYGMSPYEYRRKEK 502 >UniRef50_UPI0001788F54 two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788F54 Length = 523 Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats. Identities = 37/122 (30%), Positives = 59/122 (48%) Query: 268 PVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVG 327 +R ER + + +P + + + YI++H I + V + S L F G Sbjct: 397 FIREAERAIGETNTSVNPNMDRLLEYIQDHYADPITLTGVARQFHFNASYLSSYFASYNG 456 Query: 328 ETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVN 387 E ++ +LEKA LL++T L+I+EIS GY YF VFKK +P ++R N Sbjct: 457 EGFSEYLNKIRLEKAMELLLTTELTISEISASVGYSDQSYFTKVFKKQTGISPSQFRRQN 516 Query: 388 SE 389 + Sbjct: 517 AR 518 >UniRef50_C9KMM2 Putative methylphosphotriester-DNA alkyltransferase / transcriptional activator of the adaAB operon n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KMM2_9FIRM Length = 310 Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats. Identities = 40/201 (19%), Positives = 85/201 (42%), Gaps = 10/201 (4%) Query: 195 ARHILQVCEHLHIPVPE---KLCVIGIDNEELTRYLSRVALSSVA-QGARQMGYQAAKLL 250 +L C + E ++ + E+ L R+ ++ + + G + L+ Sbjct: 76 GELVLLACREKNDYWSEGTARVKWFHFNGREVGPLLERIYETNGSGHMSTFFGARVEPLI 135 Query: 251 HRLLD------KEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKV 304 +L E R L + + +S + + + +V +A+ YIR H + + V Sbjct: 136 DDILQGLKSGNCSEFQFSRDLYSILCQLAEQSLEKEAPAEESVRRAVAYIRRHYAEPLSV 195 Query: 305 DQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPS 364 + ++V +S + FK + + H + +L +A+ +L+ T I+ I++ G+ S Sbjct: 196 QDIAESVSLSPYYFTRLFKRIMMTSPHLYLLNHRLAEAKKMLVYTRDKIDTIAEATGFQS 255 Query: 365 LQYFYSVFKKAYDTTPKEYRD 385 YF F + + TPK +R Sbjct: 256 SSYFVRAFHREMNMTPKAFRQ 276 >UniRef50_C5EHL9 Predicted protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EHL9_9FIRM Length = 254 Score = 158 bits (399), Expect = 4e-37, Method: Composition-based stats. Identities = 49/254 (19%), Positives = 101/254 (39%), Gaps = 17/254 (6%) Query: 139 REYAFRQLVAEEKYRGV-VYQGLETAPENWQHAQNRLADWLQTLPPQTGIIAVTDARAR- 196 R + L A + ++ V++ +A + + +P +G+ + R R Sbjct: 13 RNGLLKLLGARDGWQVTGVFEDALSALTALYDNEADVIVTDIKMPEVSGLELIRQIRERN 72 Query: 197 ---HILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRL 253 HI+ + H + +K +G+ L R ++ + +++ A + Sbjct: 73 QDIHIVILSGHSNFAYAQKAIELGVTRYLLKPTNPRELVAVLEGIEKELKQGAGDAPDKK 132 Query: 254 LDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGI 313 PP D + + V +A+ Y+ H I + + + + + Sbjct: 133 Q------------PPQEGEAGSGADGDGVGNLLVQKAIQYVEVHYGGRITLKDMSEELHL 180 Query: 314 SRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFK 373 S + L + FK G+ + + ++ KAR+ L ++++++M GY +YF S FK Sbjct: 181 SPNYLCELFKRHTGKNLMEYVTEYRMMKARNYLNHVEYKVSDVAEMVGYKEAKYFSSTFK 240 Query: 374 KAYDTTPKEYRDVN 387 K Y TP EYR+ Sbjct: 241 KMYGMTPLEYRNKR 254 >UniRef50_UPI0001788C4E two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788C4E Length = 538 Score = 158 bits (399), Expect = 4e-37, Method: Composition-based stats. Identities = 49/271 (18%), Positives = 97/271 (35%), Gaps = 26/271 (9%) Query: 135 WATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQTLPPQTGIIAVTDAR 194 + + A+ V R ++ E ++ L + + + A++ ++ Sbjct: 274 FPQDLPKAYSTAVQALCSRNLLTGKCHIHRERAVESEGSRTLRLSSYEEEFKLAALSGSK 333 Query: 195 AR------HILQVCEHLHIPVPE------------KLCVIGIDNEELTRYLSRVALSSVA 236 R LQ + PE + + + + +S Sbjct: 334 ERIEAATAEWLQEVRERDLVSPEHLMRWNSEWDWIQYHWTENEVKSTQEPVEDAEISQDL 393 Query: 237 QGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRN 296 A R ++ + + R T S + + Y+ Sbjct: 394 PSALPYSEDGMICWDRWREQ--------ISGRLYAASRVLTQIHSKDNHIIHDIAQYLEQ 445 Query: 297 HACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEI 356 H I + Q+ +SR + ++FK+E G T+ + ++EKA++LL++ + I +I Sbjct: 446 HYHDEISLQQIAGKFFLSREYISRKFKQEFGVTLSDFLGRIRIEKAKTLLLNPQIRIAQI 505 Query: 357 SQMCGYPSLQYFYSVFKKAYDTTPKEYRDVN 387 ++M GY +YF VFKK TP EYR + Sbjct: 506 AEMVGYQDEKYFSKVFKKMEGFTPNEYRKKH 536 >UniRef50_A8SS64 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SS64_9FIRM Length = 328 Score = 158 bits (399), Expect = 4e-37, Method: Composition-based stats. Identities = 48/195 (24%), Positives = 83/195 (42%), Gaps = 14/195 (7%) Query: 210 PEKLCVIGIDNEELTRYLSRVALSSVAQGAR-QMGYQAAKLLHRLLDK------EEMPLQ 262 P +G ++ + + + + A ++ +L+ E+ Q Sbjct: 120 PWSYMWVGFHGYRAEDFIESMGYKKDSPIIKIEQMDTCATCINNMLEYSQITRINEVKRQ 179 Query: 263 RILVPPVRVIERRSTDYRSLTDP-------AVIQAMHYIRNHACKGIKVDQVLDAVGISR 315 L+ I +T + D V A+ +I IK+D + D +GISR Sbjct: 180 SALMMLFATIMEDNTSGQQENDNVEYPSKIYVKAAVDFITEKYMNKIKIDDIADFIGISR 239 Query: 316 SNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKA 375 S+L FK+E+G + + +LEKA SLL S+ IN I+ CGY F FK+ Sbjct: 240 SHLTGSFKKEMGVSPQEYLINFRLEKAASLLRSSKEQINIIAYQCGYEDSLSFSKAFKQK 299 Query: 376 YDTTPKEYRDVNSEV 390 + +PK +R++ E+ Sbjct: 300 FGMSPKSFRNLEVEL 314 >UniRef50_O31522 HTH-type transcriptional regulator yesS n=2 Tax=Bacillus subtilis RepID=YESS_BACSU Length = 761 Score = 158 bits (399), Expect = 4e-37, Method: Composition-based stats. Identities = 42/223 (18%), Positives = 80/223 (35%), Gaps = 25/223 (11%) Query: 168 QHAQNRLADWLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYL 227 Q A+ + ++ L + I RH+ L + E + G++ EL ++ Sbjct: 563 QEAKELIDGCMKELSEKAAI-------DRHVHSALIQLFSRIQEDILHSGLNPSELFQH- 614 Query: 228 SRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAV 287 + L + E + V + + Sbjct: 615 ----------------RNPFLDISELREPNEAAAWLMDVVVTPYLSKLEGRKNRQQKQLA 658 Query: 288 IQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLI 347 + + I I ++ DA+G++ L K FK+ G + ++EKA+ LL+ Sbjct: 659 ERVIAMIHEQYMADISLESCADALGMNSYTLSKAFKQVTGINFIDYVTQIRIEKAKELLV 718 Query: 348 STTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSEV 390 +T I+++S+ GY YF +FKK P +R + E Sbjct: 719 NTNKKIHDVSEEVGYRH-NYFNRIFKKQVGMPPGVFRQMYQET 760 >UniRef50_B0NX83 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0NX83_9CLOT Length = 539 Score = 157 bits (398), Expect = 5e-37, Method: Composition-based stats. Identities = 35/131 (26%), Positives = 61/131 (46%), Gaps = 1/131 (0%) Query: 258 EMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKG-IKVDQVLDAVGISRS 316 E + I ++ I R+ + +A +I + + + + V D VG+S S Sbjct: 408 EKAAEYIEELIIQAIRMRNERLGKKHSSLITEAKEFIVKNYQEETLSLSDVADQVGLSSS 467 Query: 317 NLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAY 376 + FK+E GE+ + + +++KA+ +L T + ++IS GY YF +FKK Sbjct: 468 HFSTTFKQETGESFVEFLTSVRMDKAKEMLCFTDMKASQISYEVGYKDPHYFSYLFKKTQ 527 Query: 377 DTTPKEYRDVN 387 TP EYR Sbjct: 528 GCTPSEYRSRR 538 >UniRef50_C5EPF6 Two component transcriptional regulator n=4 Tax=Clostridiales RepID=C5EPF6_9FIRM Length = 550 Score = 157 bits (398), Expect = 5e-37, Method: Composition-based stats. Identities = 36/170 (21%), Positives = 67/170 (39%), Gaps = 4/170 (2%) Query: 223 LTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSL 282 + +L + + + + + ++ + R + S Sbjct: 384 VRTFLEELGMDMLKLPEGVADMDMVLKESHSI---TALKESLIRLFEGTMLLRDSQTASK 440 Query: 283 TDPAVIQAMHYIRNHAC-KGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEK 341 + +A +IR + + I ++ V V IS S F +E+G T + ++E+ Sbjct: 441 YSQVLEEARAFIRENYAKEEISLNTVAARVNISPSYFSSIFSQEMGVTFVEYLTGVRMER 500 Query: 342 ARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSEVM 391 A+ LL+ + + EI GY YF +FKK TPKEYR + E + Sbjct: 501 AKELLMCSNMKTTEIGYEVGYKDSHYFGYLFKKTVGCTPKEYRAGSRERL 550 >UniRef50_C6CX81 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CX81_PAESJ Length = 272 Score = 157 bits (398), Expect = 5e-37, Method: Composition-based stats. Identities = 45/187 (24%), Positives = 74/187 (39%), Gaps = 12/187 (6%) Query: 210 PEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPV 269 P IG E++ L R L+S L LL+ + P L Sbjct: 86 PWSYSWIGFRGEQVGEVLERTKLTSEESVFPMDKQFMPNLYELLLESADHPKNHDLRLTS 145 Query: 270 RVIERRSTDYRSL------------TDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSN 317 +IE + SL D + +++ +I +H + I V Q+ ++G+ R Sbjct: 146 LLIEFLTVLIDSLPSSADAGVQPRKQDTYIHRSLDFIHSHFSEPITVQQMAASLGLDRKY 205 Query: 318 LEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYD 377 L FKE +G + ++++A LL SI E+++ GY F +FKK Sbjct: 206 LSYLFKEAMGLPPQQYLLNYRMDRAGELLRKGEYSIGEVARSVGYQDALLFSKMFKKLKG 265 Query: 378 TTPKEYR 384 PK Y+ Sbjct: 266 VPPKLYK 272 >UniRef50_C6D127 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D127_PAESJ Length = 534 Score = 157 bits (398), Expect = 5e-37, Method: Composition-based stats. Identities = 34/136 (25%), Positives = 67/136 (49%) Query: 255 DKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGIS 314 + R + + +D V +++ YI+ + + I + V VG++ Sbjct: 398 QIRSLSQYRHWAENIVSAVMDAAFTALESDSVVQKSVQYIKENVEEDISREDVAAHVGLN 457 Query: 315 RSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKK 374 + L + FK+E G+ + + K+ +AR LL +T ++++ I+Q GY + +F +FKK Sbjct: 458 PAYLSRLFKKETGQNLIDYLIETKMARARQLLDTTGMTVSAIAQQVGYSNFSHFTKMFKK 517 Query: 375 AYDTTPKEYRDVNSEV 390 Y P+EYR+V + Sbjct: 518 QYGINPQEYRNVTKRL 533 >UniRef50_C6J070 Two component transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J070_9BACL Length = 523 Score = 157 bits (398), Expect = 6e-37, Method: Composition-based stats. Identities = 49/268 (18%), Positives = 83/268 (30%), Gaps = 24/268 (8%) Query: 125 YGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGL----ETAPENWQHAQNRLADWLQT 180 G + A R E+ V + P + +L D L Sbjct: 270 IGGVREGWDGLSRSYREAVRVCAEEQDIVCVRHYDDIAESSGGPAIPLDEEKKLLDALLR 329 Query: 181 LPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGAR 240 R + G ++ R V + Sbjct: 330 QDKPEAAERFDLLFER------------------LKGGRSDYFPRLRGDVIGLLLYLSRG 371 Query: 241 QMGYQAAKLLHRLLDKEEMPL--QRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHA 298 +L+ L E+ +R L I+ + +A+ ++ Sbjct: 372 VEAGDGPELIEDLSACEDTASLRERALHRLGGWIDGLRERKERSRSHVLQRALLFVNQRF 431 Query: 299 CKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQ 358 + I ++Q + V +S K FK + GE + ++E+A+ L+ +LS+ EI Sbjct: 432 KEEISMEQTAEYVNLSPYYFSKLFKLQTGENFSDYLTRLRIEEAKRLIAGRSLSLKEICY 491 Query: 359 MCGYPSLQYFYSVFKKAYDTTPKEYRDV 386 GY YF VFKK+ TP EYR Sbjct: 492 EVGYKDPNYFSRVFKKSVGITPSEYRQQ 519 >UniRef50_B8I0Y2 Two component transcriptional regulator, AraC family n=1 Tax=Clostridium cellulolyticum H10 RepID=B8I0Y2_CLOCE Length = 531 Score = 157 bits (398), Expect = 6e-37, Method: Composition-based stats. Identities = 37/164 (22%), Positives = 66/164 (40%) Query: 223 LTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSL 282 + Y R+ S + + L IL V + + + + Sbjct: 368 IASYCYRLVASYKLFAPELADSEPEVYKQIQSSRNIQNLLNILRQLVENVSQVVENNGNK 427 Query: 283 TDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKA 342 V + YIR++ K I + + D + ++ S L + +K+E GE+I I+ ++E A Sbjct: 428 FSCLVKETQKYIRDNYNKNISLQSIADHIHVNSSYLSRLYKKETGESIVDAINKYRIENA 487 Query: 343 RSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDV 386 + LL + E++ G YF VF K +PKEY+ Sbjct: 488 KKLLKDPVYKVFEVACAVGIEDPAYFTHVFTKYTGMSPKEYKSK 531 >UniRef50_A8SGH8 Putative uncharacterized protein n=2 Tax=Bacteria RepID=A8SGH8_9FIRM Length = 288 Score = 157 bits (398), Expect = 6e-37, Method: Composition-based stats. Identities = 40/204 (19%), Positives = 86/204 (42%), Gaps = 15/204 (7%) Query: 199 LQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEE 258 ++ E P + V+G+ + E S+ + R+ + LLH LL + + Sbjct: 75 VEHTELSLNASPLEYIVLGVASMEF--LFSKADTNYAIFNCRENRERMVTLLHMLLAEAD 132 Query: 259 MPL-----------QRILVPP--VRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVD 305 L + +L+ I + + + + Y+ + + I +D Sbjct: 133 RSLDGCETVCQDLLEVLLIWLVRCTTISLQLEEAAPTENRECAEIKRYLDTNYREDISLD 192 Query: 306 QVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSL 365 + + +++ L F+ E G + ++ ++E+++ +L +T S+ +IS++ G+ S Sbjct: 193 LLAELAHLNKYYLAHTFQREYGISPITYLNRRRIEESKHMLGNTGYSLAQISELMGFSSP 252 Query: 366 QYFYSVFKKAYDTTPKEYRDVNSE 389 YF F+KA TP EYR + Sbjct: 253 SYFSQCFRKAEGMTPNEYRRQTRQ 276 >UniRef50_UPI0001788789 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788789 Length = 746 Score = 157 bits (397), Expect = 6e-37, Method: Composition-based stats. Identities = 50/261 (19%), Positives = 97/261 (37%), Gaps = 33/261 (12%) Query: 127 LPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQTLPPQTG 186 E + W E AE+++ V N Q + L+ L Q Sbjct: 516 PLEETQIIWEKELRGDVTGFTAEQEHEFYV----NLQAGNESSCQMLIDRALERLQRQEA 571 Query: 187 IIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQA 246 A + + + + + + ++ I+ + L Y +A S R++ Sbjct: 572 -------TADQLSHFAKSVSVRMRRTVELLKINTDALPDYADMLAYSVTPAQYREV---- 620 Query: 247 AKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQ 306 L L + I R+ ++ + + Y+ +H + I ++Q Sbjct: 621 --------------LLGELSHATQAIRRKREEHY----DIIQYVIQYLESHYNEEISLEQ 662 Query: 307 VLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQ 366 + + +S + L KE+ G ++A ++ KA+ LL +T + I E+ GY ++ Sbjct: 663 LAYKLNMSPTYLSGYIKEKTGSNFSDQLNAIRITKAKELLETTNMPIQEVGNRIGYRNVT 722 Query: 367 YFYSVFKKAYDTTPKEYRDVN 387 F +FKK TP +YR N Sbjct: 723 SFIRMFKKITGQTPGDYRKTN 743 >UniRef50_UPI000178A7F2 two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178A7F2 Length = 544 Score = 157 bits (397), Expect = 7e-37, Method: Composition-based stats. Identities = 54/268 (20%), Positives = 99/268 (36%), Gaps = 12/268 (4%) Query: 129 ESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQTLPPQTGII 188 S R ++ +++++ + YR ++ ++ + + L L Q I Sbjct: 280 VGSRVRTLSDLKHSYQDALLALDYRLILGAEKVIFIDDVESPRQEGIR-LDELQEQALIR 338 Query: 189 AVTDARARHILQVC-----EHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMG 243 + A + + E + + + I E+ + R A S + G Sbjct: 339 NLKLGTAEELSEAITHIFDELIGASC--TIQEVQIYLLEVVTAILRTAKESGIELEEMFG 396 Query: 244 --YQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACK- 300 YQ + + +E V + S+ + D V +A+ Y R H Sbjct: 397 AGYQLHAEIFKFSGLQEAKAWLQDVSLAIRKQISSSRQHAYKD-IVEKALQYTREHYGDP 455 Query: 301 GIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMC 360 I + ++ + IS FK+E+ T + ++E A+ LL ST L EI++ Sbjct: 456 DISLQKLCMHLHISTGYFSGVFKKELKMTYVQYLMQLRMETAKELLRSTDLKAFEIAERV 515 Query: 361 GYPSLQYFYSVFKKAYDTTPKEYRDVNS 388 G+ YF FKK +PKEYR Sbjct: 516 GFADPNYFSFSFKKQVGVSPKEYRAQAR 543 >UniRef50_B1BNT9 Transcriptional regulator, AraC family n=4 Tax=Clostridium perfringens RepID=B1BNT9_CLOPE Length = 285 Score = 157 bits (397), Expect = 7e-37, Method: Composition-based stats. Identities = 32/187 (17%), Positives = 79/187 (42%), Gaps = 12/187 (6%) Query: 210 PEKLCVIGIDNEELTRYLSRVALS--------SVAQGARQMGYQAAKLLHRLLDKEEMPL 261 P I + + Y+ L+ + + ++ + ++ + Sbjct: 91 PWHYMWIEFNGIKAKLYMEEAGLTPANPIFKLKESINSLKIIEEMKSIISNNKKNPSFLI 150 Query: 262 QRILVPPVRVIERRSTDYRSLTDP----AVIQAMHYIRNHACKGIKVDQVLDAVGISRSN 317 + + +IE + D + +A+++I + + I V+ V + +S+S Sbjct: 151 GHLYLFINSLIEFSLNSTLNELDTLNELYIREALNFIEENYNRNISVEDVSNRCNLSKSY 210 Query: 318 LEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYD 377 + FK+ + T + K+ +A +LL +LSI++++++ GY + F FKK ++ Sbjct: 211 FTRIFKKHMNTTPQEFLIQYKMLQACNLLKDKSLSISQVAELLGYSNQFNFSVAFKKKFN 270 Query: 378 TTPKEYR 384 +P ++R Sbjct: 271 LSPSKWR 277 >UniRef50_C6LHJ3 Two-component response regulator n=2 Tax=Clostridiales RepID=C6LHJ3_9FIRM Length = 573 Score = 157 bits (397), Expect = 7e-37, Method: Composition-based stats. Identities = 50/257 (19%), Positives = 99/257 (38%), Gaps = 6/257 (2%) Query: 138 EREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQTLPPQTGIIAVTDARARH 197 E ++ YRG+ + + D + A+ A Sbjct: 317 ELAQSYSGAREAVSYRGIYGAARAINIQEIVPQEPGKIDTEAEAELSNLLKAIRLGSAAE 376 Query: 198 ILQVCEHLHIPVPEKLCVIG---IDNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLL 254 + + E + + + I EL L R L++ + KL + LL Sbjct: 377 VQEAAEKYLKRIASPVNSLQQYQIHIMELVSALYRF-LANNDISTGALSGDMKKLYNYLL 435 Query: 255 DKEEMPLQRILVPP-VRVIERRSTDYRSLTDPAVIQAMHYIRNHACKG-IKVDQVLDAVG 312 + E LQ+ L + + + + S T + +A Y+ ++ + +D + + +G Sbjct: 436 ELEPDTLQKWLTETGLSLRSQLISARSSSTKSYIRKAKEYVHSNYADETLSLDSICELLG 495 Query: 313 ISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVF 372 +S S FK E G++ + ++E+A +LI T I++ GY YF VF Sbjct: 496 VSNSYFSTTFKRETGKSFTTYLTDFRMEQASRMLIETNEKSYVIAKSVGYTDSNYFSYVF 555 Query: 373 KKAYDTTPKEYRDVNSE 389 K+ + +P +YR +++ Sbjct: 556 KRCFGVSPSKYRTEHTK 572 >UniRef50_C5EPZ4 Two component transcriptional regulator n=3 Tax=Clostridiales RepID=C5EPZ4_9FIRM Length = 517 Score = 157 bits (397), Expect = 7e-37, Method: Composition-based stats. Identities = 44/270 (16%), Positives = 89/270 (32%), Gaps = 10/270 (3%) Query: 120 NRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQ 179 F G S +R A ++ + E + + + H + L Sbjct: 253 RFFVSVGPVVSGMERAHISYMEA-KEHLKESFFHEYGFILDKDTANAPFHPPADV---LL 308 Query: 180 TLPPQTGIIAVTDAR--ARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQ 237 A A + Q + P ++ I + L +++ Sbjct: 309 EFSMALAEKQEDQALKLAGQLYQSFVPNDVLGPSQVKDIYY---KYLSKLDEHGMNNYIS 365 Query: 238 GARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNH 297 ++ G + ++ + L+ + +P V Q +I+ + Sbjct: 366 LWQKEGLNTESIWEGVMGCATLKELHDLLCAKTRQFFEQLEDSQGENPVVFQIKEFIQQN 425 Query: 298 ACKG-IKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEI 356 + V V + V +S S + FK E G+T++ + +++ ++ L I +I Sbjct: 426 YAAPSLSVPDVSEHVHLSPSYVCTVFKNETGQTLNQYLTDYRIKMSKQFLSDPRYKIADI 485 Query: 357 SQMCGYPSLQYFYSVFKKAYDTTPKEYRDV 386 S GY Y+ FKK +P EYR+ Sbjct: 486 SSKVGYSDGNYYSKAFKKIVGLSPSEYREK 515 >UniRef50_C6JBV9 Two component transcriptional regulator n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JBV9_9FIRM Length = 527 Score = 157 bits (396), Expect = 8e-37, Method: Composition-based stats. Identities = 38/164 (23%), Positives = 72/164 (43%), Gaps = 5/164 (3%) Query: 223 LTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSL 282 + YL + + + + + + +L+ + LD + R +E S + + Sbjct: 369 VFSYLHKNGIEAHTLFSSE---ERDELITKSLDAVPYMFNYLRYLIQRAVEYNS--FINE 423 Query: 283 TDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKA 342 D V ++YI H + I + D V ++ L + FK++ +I I +LEKA Sbjct: 424 KDSVVDIVLNYIHQHYSEDISRTMLADMVYLNPDYLARLFKKQTQTSIINYITTYRLEKA 483 Query: 343 RSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDV 386 + LL++ + + ++ GY + YF +FK TP EYR Sbjct: 484 KELLLNPDIPVGTVALKVGYGNYSYFSKLFKDVVGCTPNEYRKK 527 >UniRef50_C6CVE0 Two component transcriptional regulator, AraC family n=2 Tax=Bacillales RepID=C6CVE0_PAESJ Length = 515 Score = 157 bits (396), Expect = 9e-37, Method: Composition-based stats. Identities = 50/243 (20%), Positives = 93/243 (38%), Gaps = 35/243 (14%) Query: 147 VAEEKYRGVVYQGLETAP---ENWQHAQNRLADWLQTLPPQTGIIAVTDARARHILQVCE 203 V + Y + + W+ +N L D+++ + + T R +L + Sbjct: 297 VTRDGYPVKLLEQQLFDRIRLGQWEQVRNDLTDFIRRYENEGASLLHTQQRVLELLWIAS 356 Query: 204 HLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQR 263 + + E+ + S + RQ+ ++ LL R+ +R Sbjct: 357 RVLL--------------EMGVEIDTPMFSFQVRDYRQLRAESEHLLERMRQSYTEHHER 402 Query: 264 ILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFK 323 I A+ Q YI +H+ + I ++ + VG+S + K FK Sbjct: 403 I------------------EPDAIQQIKQYITDHSHEDISLEAIGRMVGLSPFYISKMFK 444 Query: 324 EEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEY 383 +++G + +++KA L+ S+ EI+ M GY YF VFKK + +P EY Sbjct: 445 DQLGINYIDFLTECRIKKAIKLMGDPERSLKEITYMVGYHDPNYFSKVFKKMCEVSPTEY 504 Query: 384 RDV 386 R Sbjct: 505 RKT 507 >UniRef50_UPI0001C358FB two component transcriptional regulator, AraC family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C358FB Length = 273 Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats. Identities = 30/100 (30%), Positives = 58/100 (58%) Query: 284 DPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKAR 343 + +A++Y+ +H + I ++ + + V ++++ + FK+E G++ + +LEKA+ Sbjct: 162 SRVIRKALNYMEDHYHEDISLESISEVVFLNKNYFSELFKKETGKSFVQYLTEYRLEKAK 221 Query: 344 SLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEY 383 LL + +E++ M G+ + YF SVFKK TPKEY Sbjct: 222 LLLAISGFKGSEVADMTGFQNNSYFISVFKKYVGCTPKEY 261 >UniRef50_A9KQP4 Two component transcriptional regulator, AraC family n=2 Tax=Clostridiales RepID=A9KQP4_CLOPH Length = 533 Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats. Identities = 39/140 (27%), Positives = 65/140 (46%), Gaps = 2/140 (1%) Query: 248 KLLHRLLDKEEM-PLQRILVPPVRVIERRSTDYRSLTD-PAVIQAMHYIRNHACKGIKVD 305 L +++ E+ L+ + + R + + +T V +A YIR++ K + ++ Sbjct: 390 DYLPTIVEIEQYDALRLWFAERIEIACRNVENKKKVTSISTVEKAKLYIRDNYQKDLSLE 449 Query: 306 QVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSL 365 +V V IS K FKEE G + ++ A+ LL+ + S+ EI M GY Sbjct: 450 EVSRQVDISPYYFSKVFKEETGTNFIDYLTELRMSVAKQLLLESERSMKEIGIMVGYSDP 509 Query: 366 QYFYSVFKKAYDTTPKEYRD 385 YF FKK TP EY++ Sbjct: 510 NYFSRSFKKNIGITPTEYKE 529 >UniRef50_B8D1C2 Transcriptional regulator, AraC family n=1 Tax=Halothermothrix orenii H 168 RepID=B8D1C2_HALOH Length = 276 Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats. Identities = 44/191 (23%), Positives = 75/191 (39%), Gaps = 13/191 (6%) Query: 210 PEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLL--------DKEEMPL 261 P + IG + YL+R LS + + + +E + Sbjct: 86 PWEYAWIGFHGLKAKDYLNRANLSLANPVFSDTDGSPLRFIFEEMTAARKLKRSREIKLI 145 Query: 262 QRILVPPVRVIERR---STDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNL 318 I V +IE ST + + + +A+ YI + + IKV + + VG+ RS L Sbjct: 146 GLIYVFLSHLIELNVSGSTPDNNSKENYIKKAIEYIEKNYSRHIKVIDIANHVGLDRSYL 205 Query: 319 EKRFKEEVGETIHAMIHAEKLEKARSLLIST--TLSINEISQMCGYPSLQYFYSVFKKAY 376 F E + + + ++ KA L+ + LSI +IS+ GY F FKK Sbjct: 206 WSIFNEFLNTSPQQYLINYRINKACELMKNRNLNLSIGDISRSVGYKDPLTFSKTFKKTK 265 Query: 377 DTTPKEYRDVN 387 +P Y+ + Sbjct: 266 GISPLHYQKQS 276 >UniRef50_C6JCU5 Two component transcriptional regulator n=2 Tax=Ruminococcus RepID=C6JCU5_9FIRM Length = 539 Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats. Identities = 65/266 (24%), Positives = 104/266 (39%), Gaps = 12/266 (4%) Query: 130 SSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQN-RLADWLQTLPPQTGII 188 S R E Y+++ YR ++ L E + + L L+TL + I Sbjct: 279 GSWVRSPQELVYSYKLAEKAIGYRYLLGGSLLLDMEEKKTDNSINLIKSLETLTEE--IK 336 Query: 189 AVTDARARHILQVCEHL--HIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQA 246 + IL+ EH V + I + +++ R + S++ ++ Q Sbjct: 337 VGNRQKVTEILEQIEHEIKGALVEKSYACIYL--QQVIRAIGNTC-QSLSDDPEKIIAQR 393 Query: 247 AKLLHRLLDKEEMPLQRILV--PPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACK-GIK 303 KLL + + LV V E S + AM YIR + + Sbjct: 394 EKLLKEVSQAKTFDKAVTLVKEYAEGVFESLQDLNSSSGQRQGMMAMDYIRKNYMDPDLS 453 Query: 304 VDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYP 363 ++ + + IS S FKE GET + ++EKA+ LL +TTL EI++ G+ Sbjct: 454 LNSICSYLNISTSYFSTIFKEMTGETFVESLTRIRMEKAKELLENTTLKNYEIAEKVGFS 513 Query: 364 SLQYFYSVFKKAYDTTPKEY-RDVNS 388 YF FKK TP EY R+ Sbjct: 514 DPHYFGISFKKMTGKTPTEYAREKRR 539 >UniRef50_C6CT83 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CT83_PAESJ Length = 472 Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats. Identities = 48/241 (19%), Positives = 88/241 (36%), Gaps = 18/241 (7%) Query: 153 RGVVYQGLETAPENWQHAQNRLADWLQTLPPQTGIIAVT----DARARHILQVCEHLHIP 208 G E+ + +N L + + I AV DA RHI ++ + Sbjct: 245 HQFFVTGKRGVYEHRPYKENELNRRMSEI--SDAIAAVDMPAIDAAFRHIAELFREDALS 302 Query: 209 VPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPP 268 V +L ++ + + + Q+ + +L + Sbjct: 303 TRHAFRVY----NMTISFLFKLGQTEETLYSYEQLVQSFGDVFDMLG-------ELQALV 351 Query: 269 VRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGE 328 VR + Q + Y+ +H + + + + + ++ S + + FK+EVGE Sbjct: 352 VRHCRGGEAHPPETKNRTFNQILQYVTDHFREELSLQGLSEQFFMNPSYISQLFKKEVGE 411 Query: 329 TIHAMIHAEKLEKARSLL-ISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVN 387 T I ++ A LL + SI+EI++ GY YF +FKK TP +YR Sbjct: 412 TFVGYISQLRIAHACKLLDENDDYSIHEIAEKIGYNDYFYFARLFKKMTGKTPTQYRSER 471 Query: 388 S 388 Sbjct: 472 K 472 >UniRef50_A4XMH2 Two component transcriptional regulator, AraC family n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XMH2_CALS8 Length = 476 Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats. Identities = 28/167 (16%), Positives = 74/167 (44%), Gaps = 2/167 (1%) Query: 226 YLSRVALSSVAQGARQMGYQAAKLLHRLLD--KEEMPLQRILVPPVRVIERRSTDYRSLT 283 + ++++L + + + + + L+ + + ++ + + Sbjct: 306 FWNQLSLYLNKLNPSEYSDMSIMEYDEIANTFCNIENMSEYLLERIEGVITKNKQFEYCS 365 Query: 284 DPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKAR 343 + ++ + YI NH + + + ++ IS + + F++ +G + + +++KA Sbjct: 366 NENFLKLIEYIDNHYSEPLSLKELSAKFFISLNYCCELFRKVIGCSFTEYLTNLRMKKAE 425 Query: 344 SLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSEV 390 LL +T S+ EI+++ GY +F FKK Y T P +R + ++ Sbjct: 426 ELLKTTNYSVAEIARLVGYNDYYHFNKAFKKFYGTPPATFRKKHFQI 472 >UniRef50_UPI0001C36BEF two component AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C36BEF Length = 533 Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats. Identities = 35/170 (20%), Positives = 68/170 (40%), Gaps = 6/170 (3%) Query: 220 NEELTRYLSRVALSSVAQGARQMGY--QAAKLLHRLLDKEEMPLQRILVPPVRVIERRST 277 YL + + A + E ++I + +E Sbjct: 367 GLLFKCYLDHNPFHRTVENGEMRERWSEGAGNCSSVSALTEYVTEQITADLMECVEANRE 426 Query: 278 DYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAE 337 R V+ A YI+ + + I ++++ + G + + + FK+E G+T A + Sbjct: 427 KER----RPVLNAAEYIKKNYSQKISLEEMAEQGGFNMNYFSELFKKETGKTFTAYVTEV 482 Query: 338 KLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVN 387 ++E+A+ LL T L + E+++ GY ++F F K P EYR + Sbjct: 483 RMEEAKKLLRDTDLPVYEVAEAVGYKDSKFFSQQFVKNVGIKPMEYRKLY 532 >UniRef50_A9KJM4 Two component transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KJM4_CLOPH Length = 517 Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats. Identities = 35/150 (23%), Positives = 65/150 (43%), Gaps = 2/150 (1%) Query: 234 SVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHY 293 ++ + + L L + E V++ + + A+ + + Y Sbjct: 363 GGSESEYTNYIELLRELDSLAEGEINS--WAFRSVNYVLKSVRDNQDENSFAAIRKVLRY 420 Query: 294 IRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSI 353 + H + I +++V + IS + FKE++G T + +++KA+ LI + +I Sbjct: 421 VDTHYDEDITLEEVAGILNISPQYFSRIFKEKMGVTYVDYLTNIRIKKAQEWLIYSDKNI 480 Query: 354 NEISQMCGYPSLQYFYSVFKKAYDTTPKEY 383 EI M GY YF VFKK TPK++ Sbjct: 481 QEICYMVGYKDPNYFSRVFKKTVGVTPKQF 510 >UniRef50_A8RUC8 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RUC8_9CLOT Length = 479 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 30/105 (28%), Positives = 55/105 (52%) Query: 280 RSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKL 339 + P + +A+H I + I ++ V + + I+ L + F +E+ + + + ++ Sbjct: 369 SAGYSPLIQKALHVIDKSYKEPISLNSVAEQLNITPQYLSRLFMKEMSRSFVDYLTSYRM 428 Query: 340 EKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 E+A+SLL T + IN I GY +YF ++FKK TP +YR Sbjct: 429 ERAKSLLQDTNMKINMICVQVGYQDAKYFCTLFKKITGVTPNQYR 473 >UniRef50_A4XMG0 Two component transcriptional regulator, AraC family n=2 Tax=Thermoanaerobacterales RepID=A4XMG0_CALS8 Length = 529 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 32/137 (23%), Positives = 61/137 (44%) Query: 251 HRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDA 310 +L E+ L + + + + V A+ +I + K I ++ V Sbjct: 392 ENILKTEKKELIKASLLSFLNATVDKIEQIENKNLIVKAAISFIEKNYNKNITLESVAKE 451 Query: 311 VGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYS 370 V ++ + L FK E+ +H +++KA+ LL + L +++ M G+ +YF Sbjct: 452 VYVTPAYLSILFKRELKINFVDYLHKIRIQKAQELLKNQNLKTYQVANMVGFSDEKYFSQ 511 Query: 371 VFKKAYDTTPKEYRDVN 387 VFKK TP ++R+ N Sbjct: 512 VFKKYTGLTPSQFREAN 528 >UniRef50_C5RGS5 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RGS5_CLOCL Length = 293 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 41/188 (21%), Positives = 75/188 (39%), Gaps = 17/188 (9%) Query: 198 ILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKE 257 + + + P ++ DN ++ L + + + LL Sbjct: 115 VKSIALLFEMRCP---FLLLKDNNDIYHSLKNIVIQLGMESEENQFSIQLLFYELLLKIS 171 Query: 258 EMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSN 317 ++ + S + S ++ + +A H+I + K I + + V I+ Sbjct: 172 KVAM--------------SNENTSTSNIYINKAKHFISMNYDKDITIKDISSYVNINEDY 217 Query: 318 LEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYD 377 L + FK+ G TI + ++EKA+ LL +T + I +I G S QYF VFKK Sbjct: 218 LNRIFKKHTGHTITEYVTLFRIEKAKMLLSNTDIPIIDICSYVGINSRQYFSQVFKKCTG 277 Query: 378 TTPKEYRD 385 +P +YR Sbjct: 278 ISPYKYRK 285 >UniRef50_B5CXD1 Putative uncharacterized protein n=1 Tax=Bacteroides plebeius DSM 17135 RepID=B5CXD1_9BACE Length = 293 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 40/197 (20%), Positives = 74/197 (37%), Gaps = 24/197 (12%) Query: 210 PEKLCVIGI------------------DNEELTRYLSRVALSSVAQGARQMGYQAAKLLH 251 P + I D+ R+ R+ L + +MGY L + Sbjct: 102 PWSIYWIHFTGEQSHLFSELFNRTIYIDDSPTARFNDRIQLFNEILVNLEMGYSIENLEY 161 Query: 252 RLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAV 311 L L +L + + R + D + + ++Y++ + K + ++ + ++V Sbjct: 162 ITLC-----LWYLLGSFRYIPQFREINKPKTQD-TIQKVINYMKANLDKQLTLEDMAESV 215 Query: 312 GISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSV 371 S + L F ++ G + + K++KA LL T EI+ + YF V Sbjct: 216 NYSPTYLSTLFTQKSGMSPINYFNQLKIQKACQLLDFTDKKAKEIAFELAFSDPYYFSKV 275 Query: 372 FKKAYDTTPKEYRDVNS 388 F K +PKEYR Sbjct: 276 FTKYMHMSPKEYRMKKK 292 >UniRef50_Q5WL10 AraC/XylS family transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WL10_BACSK Length = 298 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 38/159 (23%), Positives = 73/159 (45%), Gaps = 2/159 (1%) Query: 232 LSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDP--AVIQ 289 L Q + + + ++ + +Q +L + I + + D V + Sbjct: 122 LLHDTDDTYQCLRRLILEVDKKSEQTDFMVQLLLSEYLIRIAELAEAKVAEPDQQAYVKR 181 Query: 290 AMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLIST 349 A+ YI + + + V + ++V + L++ FK G++IH + + ++ KA+++L T Sbjct: 182 ALAYIHQNYDREVSVADIANSVHLHPGYLQRVFKAFTGKSIHEFLISYRINKAKAMLKQT 241 Query: 350 TLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNS 388 +SI +I G S QYF + FKK TP EYR + Sbjct: 242 DISITDIPHYIGMNSQQYFSTTFKKHVKCTPSEYRKRHQ 280 >UniRef50_C9KN80 Transcriptional regulator, AraC family n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KN80_9FIRM Length = 285 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 40/185 (21%), Positives = 76/185 (41%), Gaps = 9/185 (4%) Query: 210 PEKLCVIGIDNEELTRYLSRVALSSVAQGAR-QMGYQAAKLLHRLLDKEEMPLQRILVPP 268 P +G EE+ + + LS G + + +L +M + Sbjct: 85 PWNYIWVGAAGEEMKHLMHVLGLSQANPIFSCHQGDRLVHCVRDMLQHRQMTMTDHYFRM 144 Query: 269 VRVI--------ERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEK 320 + ER+ + + + M Y+R+H + + ++ + ++RS L Sbjct: 145 STLYRFIAILSEERQVNQPLASVNSYIANVMTYVRHHLHEHMSTAEIAATMNLNRSYLSS 204 Query: 321 RFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTP 380 F+ + G T+ + I ++ +A+ LL ST LSI I++ CGY F+K Y +P Sbjct: 205 LFRSQTGMTLRSYIQLCRMTRAKYLLESTHLSIASIAESCGYEKSDSLNRTFRKTYGISP 264 Query: 381 KEYRD 385 +YR Sbjct: 265 ADYRK 269 >UniRef50_B0NGA4 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NGA4_EUBSP Length = 295 Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 40/184 (21%), Positives = 75/184 (40%), Gaps = 8/184 (4%) Query: 210 PEKLCVIGI--DNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVP 267 P + + +N + ++ + LL R+L + I + Sbjct: 105 PWSILWVHFKGENTAYFPIDEPHVVPMNSRHSDNRMMVLFNLLFRVLRRNYTLGNFIYIS 164 Query: 268 ------PVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKR 321 V R D S+ D V + ++ + + + ++++ + V +SRS L Sbjct: 165 QVLSLILSEVYYREKVDESSVQDRHVTMVIRFMYENLTRSLTLEEISEEVQLSRSYLNTI 224 Query: 322 FKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPK 381 FK + G + K+++A LL +T L I E+S GY YF +FKK +PK Sbjct: 225 FKNQTGRSPVEFFIHLKMQEACKLLKNTNLYIYEVSSRLGYEDQYYFSRIFKKVVGVSPK 284 Query: 382 EYRD 385 +Y++ Sbjct: 285 DYKN 288 >UniRef50_Q9K9C1 Two-component response regulator n=1 Tax=Bacillus halodurans RepID=Q9K9C1_BACHD Length = 510 Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 31/126 (24%), Positives = 58/126 (46%) Query: 264 ILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFK 323 + V ++ + Y + ++ + + YI H + + + Q+ + + S L F+ Sbjct: 379 CFYQFLEVTKQIISVYSNEGSSSIQKMLAYIEEHHSEPLSLSQLANYFHFNPSYLSAYFR 438 Query: 324 EEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEY 383 + E ++ ++ KA+ L S+T+ I+EI + GY YF VFKK P Y Sbjct: 439 QHHDEGFSEYLNKVRIRKAKEWLKSSTIPISEIYALVGYSDHSYFCKVFKKRTGMPPSRY 498 Query: 384 RDVNSE 389 R N+E Sbjct: 499 RRENAE 504 >UniRef50_A4ITD0 Sugar ABC transporter (Permease) n=3 Tax=Bacillaceae RepID=A4ITD0_GEOTN Length = 366 Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 40/137 (29%), Positives = 72/137 (52%), Gaps = 1/137 (0%) Query: 254 LDKEEMPLQRILVP-PVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVG 312 L ++ LQ++ V +IE+ D+ D + +A+ YIR + IK +V + V Sbjct: 226 LKTFDLILQKMFEEDLVTIIEKLGLDHEETNDWLIERALEYIRQFYREPIKASEVANVVN 285 Query: 313 ISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVF 372 IS + F+++ G+T + ++ ++ +AR LL T+L + I+ G+ +YF VF Sbjct: 286 ISANYFSTIFRQKTGKTFNEYVNLLRVNEARKLLSETSLRVGVIANNVGFHEYKYFVEVF 345 Query: 373 KKAYDTTPKEYRDVNSE 389 KK TP EYR++ + Sbjct: 346 KKFTGMTPTEYRNLYNR 362 >UniRef50_A7VRD3 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VRD3_9CLOT Length = 277 Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 38/154 (24%), Positives = 70/154 (45%), Gaps = 10/154 (6%) Query: 241 QMGYQAAKLLHRLLDKEEMPLQ----------RILVPPVRVIERRSTDYRSLTDPAVIQA 290 + Y+ L LL + ++ L+ V + R + + + + Sbjct: 120 EYRYKMDIYLRELLQETSSQIEFYQEISQGLVSALLVLVMRLIRINPEDEAALSQECQKI 179 Query: 291 MHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTT 350 Y+ + I +D + + V IS+ L FKE+ G + + ++++EKA LL T Sbjct: 180 KEYLDQNFTSPITLDSLSETVYISKHYLSHLFKEQTGVSPIKYLTSKRMEKACELLSETE 239 Query: 351 LSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 L ++E+S+ GY + YF VFK+ Y +P +YR Sbjct: 240 LPVSEVSKAVGYENPLYFSQVFKRIYGISPVKYR 273 >UniRef50_C6J0N4 Response regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J0N4_9BACL Length = 533 Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 50/215 (23%), Positives = 88/215 (40%), Gaps = 10/215 (4%) Query: 178 LQTLPPQTGIIAVTDARARHILQVCEHLHIPVPE-------KLCVIGIDNEELTRYLSRV 230 L P Q + A+ R+ + I V + + L + Sbjct: 320 LPPFPEQAWLEALQQLRSEEAEAMLHDYLINVRQLRIDKSLVYEWAIDLLDRLEEQIHSP 379 Query: 231 ALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQA 290 +L+ A+ ++ + + L + E + R + ++ R+TD + V Q Sbjct: 380 SLNGQAEPVKRAALYQSVYDCQTLQEIEAAIWRAAAHYLELLMERATDKNA---KLVHQV 436 Query: 291 MHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTT 350 I N + I + + V +S + L F+++ G TIH + +LEKA+ +L + Sbjct: 437 CQIIDNTYHEPITIQSLSSQVYLSPNYLRSIFRDKTGMTIHDYLTRIRLEKAKEMLADPS 496 Query: 351 LSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRD 385 L + +I+Q GY S YF S+F K TP EYR Sbjct: 497 LKVQDIAQKIGYESTSYFISLFVKNQGVTPNEYRK 531 >UniRef50_C3QA40 Putative uncharacterized protein n=3 Tax=Bacteroides RepID=C3QA40_9BACE Length = 288 Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 36/160 (22%), Positives = 67/160 (41%), Gaps = 3/160 (1%) Query: 233 SSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMH 292 + Q R G+ +L + ILV + R+ + + Sbjct: 130 EKILQLTRMQGFHTVLEFLSILYDLSTADRHILVSNLY---DTKDTIRTSKSRRIAKVCD 186 Query: 293 YIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLS 352 YI + + IK+ V V +S S F+++ T I+ ++ +A +L T+ + Sbjct: 187 YIEKNFEEPIKLGDVAALVNMSESAFSHFFRKKTNCTFIDYINNLRVARACQMLTETSHT 246 Query: 353 INEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSEVML 392 + EI CG+ +L F +FKK TP EYR + ++++ Sbjct: 247 VAEICYSCGFNNLSNFIRIFKKKKGNTPSEYRTILQQMLI 286 >UniRef50_C6JD25 Response regulator receiver protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JD25_9FIRM Length = 519 Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 40/169 (23%), Positives = 69/169 (40%), Gaps = 1/169 (0%) Query: 223 LTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRV-IERRSTDYRS 281 + R +A S + L L + R+ IE+ + Sbjct: 351 VRRCCFEIASSLIFSYMEVSCEVEEGKLDALSKSLSSAGKEEACEITRMFIEQLIENDEE 410 Query: 282 LTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEK 341 + A HYI H + I V + +++ I+ + + FK GE + I +++EK Sbjct: 411 DVHYTISNARHYIDEHLAEDISVSSIAESLYITPNYFSRLFKRITGEGCNEYIVRKRIEK 470 Query: 342 ARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSEV 390 A+SLL +T++ +I+ M GY YF FKK +P +YR+ Sbjct: 471 AKSLLETTSIKTGKIAMMVGYRDTNYFSLAFKKHTGKSPTKYREEMQNT 519 >UniRef50_A8RKC7 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RKC7_9CLOT Length = 545 Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 45/222 (20%), Positives = 93/222 (41%), Gaps = 16/222 (7%) Query: 169 HAQNRLADWLQTLPPQ---TGIIAVTDAR--ARHILQVCEHLHIPVPEKLCVIGIDNEEL 223 + L ++ P + + AV D A+ + C+ + V + +L Sbjct: 331 KDEAELIAAIKFGPREKIEEAVQAVMDKMSDAKVHFRQCQAYMLSVSSSIV-------QL 383 Query: 224 TRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLT 283 + + L +A+ + G A + R++ KE+ +L +R+ + + + + Sbjct: 384 IQQYD-LDLEQLAEEGEEQGDTFAV-IPRMMKKEDFA-HWLLSAALRMNQAMNRERDNTM 440 Query: 284 DPAVIQAMHYIRNHACK-GIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKA 342 + +A YI ++ + V+++ + +S + FK+E G+ A + +L+KA Sbjct: 441 KQVIQKAKEYIMDNYQDPDLSVEKICRQLHMSPAYFSTMFKKETGQAYTAYLTQVRLDKA 500 Query: 343 RSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 LL T I+ GY YF VFKK + +P ++R Sbjct: 501 VELLNKTDDKTYVIAAKVGYQEQNYFSYVFKKRFGVSPTKFR 542 >UniRef50_C6CTP9 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CTP9_PAESJ Length = 537 Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 43/194 (22%), Positives = 81/194 (41%), Gaps = 9/194 (4%) Query: 199 LQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQ------AAKLLHR 252 L+ L + E++ + E LSR A+ Q G + LL Sbjct: 347 LENARLLPVITQEQIELWRF---EYESMLSRWRQELAAKQGIQAGAEPSSGLPLYVLLDE 403 Query: 253 LLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVG 312 +R L+ + + + + Y+ + + + + + + Sbjct: 404 QGRLSLELCRRELLNGLTAFAALTGAGGNKEHSIMRDIARYMEQNYNREVTLQDISERFY 463 Query: 313 ISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVF 372 +SR + +RFK+E+GE + + ++EKA+ LL + L I +I++M GY +YF VF Sbjct: 464 LSREYISRRFKQEMGENVFDYLGRIRVEKAKLLLQNPNLKIAQIAEMVGYDDDKYFSKVF 523 Query: 373 KKAYDTTPKEYRDV 386 KK +P +YR + Sbjct: 524 KKFEGQSPNQYRKL 537 >UniRef50_C8P1S0 AraC family DNA-binding response regulator n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P1S0_ERYRH Length = 497 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 41/169 (24%), Positives = 82/169 (48%), Gaps = 2/169 (1%) Query: 220 NEELTRYLSRVALSSVAQGARQMGYQAAK-LLHRLLDKEEMPLQRILVPPVRVIERRSTD 278 + E RY+ V S + + +G Q LLH L + + R ++ + R Sbjct: 322 DPEYVRYIGFVIFSDIYRQHESVGSQMYHDLLHELNKCDSIAEIREVLH-HALEATRYDQ 380 Query: 279 YRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEK 338 +P + + + + + I + + D + ++ L + FK+E ++ ++ + Sbjct: 381 VLKQHNPNIQKVLQIVLKDYAQDITISSIADTLHMNAMYLGQLFKKETNKSFSQYLNHFR 440 Query: 339 LEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVN 387 +++A++LL+ + +INEI+++ GY S YFY FKK +PKEYR+ Sbjct: 441 IKEAQNLLLKSNHNINEIAELVGYTSSGYFYKNFKKECGISPKEYRERY 489 >UniRef50_C6IY53 Two component transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IY53_9BACL Length = 545 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 38/134 (28%), Positives = 61/134 (45%), Gaps = 1/134 (0%) Query: 257 EEMPLQRILVPPVRVIERRSTDY-RSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISR 315 + L+R+L E D + + + + Y+ H + I + V + Sbjct: 404 DPAELRRLLAGWADAAEEYGADRRETDSSQLIWHIVDYLDAHYFEDISLIDVATRFHLDP 463 Query: 316 SNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKA 375 S L K FK E + +++EKA LL S+ I+EIS++ GY + +YF VFKK+ Sbjct: 464 SYLSKLFKSVTSENFIEYVTRKRIEKACELLRSSERKISEISELIGYENQRYFSQVFKKS 523 Query: 376 YDTTPKEYRDVNSE 389 TP EYR+ Sbjct: 524 TGQTPSEYREAQQS 537 >UniRef50_C2H3H7 Response regulator n=23 Tax=Enterococcus faecalis RepID=C2H3H7_ENTFA Length = 493 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 45/245 (18%), Positives = 96/245 (39%), Gaps = 3/245 (1%) Query: 145 QLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQTLPPQTGIIAVTDARARHILQVCEH 204 + V E + Q +ET + + + + + +A A +Q + Sbjct: 245 ETVYESYEKVKQLQAIETFYQEFLPNNQK--EQMNRSAEDFTFLAFNQALMIGDMQTIQR 302 Query: 205 LHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRI 264 + +L E RY+ + S +++ + + + + + Sbjct: 303 ELDAIFNQLSQQHATP-EYVRYVVFLLFSDISRQYPTVLEENYEKIVEEIRASNNLNTLY 361 Query: 265 LVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKE 324 + + E ++ +V QA+ I + + + V D + ++ S L + FK+ Sbjct: 362 ALMQQVLAEVKNKPKIKKYSESVSQAVERIEQGYLEELNLKTVADELHLNPSYLGQIFKK 421 Query: 325 EVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 E + ++ + + A+ LL+ T +INEIS+ G+ + YF +FKK TPKE+R Sbjct: 422 ETKRSFSQYLNQVRTKHAQKLLLYTDDTINEISEKVGFNNTNYFSKMFKKLNGITPKEFR 481 Query: 385 DVNSE 389 + Sbjct: 482 EQYQS 486 >UniRef50_B8I0K9 Two component transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=B8I0K9_CLOCE Length = 532 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 38/118 (32%), Positives = 60/118 (50%), Gaps = 1/118 (0%) Query: 268 PVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKG-IKVDQVLDAVGISRSNLEKRFKEEV 326 +++E R T D + +A YI+++ I ++ V V +S S+ F +E Sbjct: 412 LNKILEFRDTRVEKKYDSIINKAKEYIQSNFSNSAISLNSVSSYVNVSPSHFSTIFSQEA 471 Query: 327 GETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 GE + +++KA LL +T+L +EI+ GY YF +FKKA TPKEYR Sbjct: 472 GENFIEYLTKVRVKKAMELLKTTSLKSSEIAYSVGYNDPHYFCYIFKKAIGVTPKEYR 529 >UniRef50_A6CLV0 AraC-type DNA-binding domain-containing protein n=1 Tax=Bacillus sp. SG-1 RepID=A6CLV0_9BACI Length = 525 Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats. Identities = 32/123 (26%), Positives = 62/123 (50%) Query: 266 VPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEE 325 +++ S ++ + Y++ + + I + ++ D +SR + ++FK++ Sbjct: 400 DEFKELVKILSDAKYQKEKNSMQRIEEYLQKNYQEDINLQEIADRFYLSREYISRKFKQD 459 Query: 326 VGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRD 385 TI + + ++EKA++LL + L I E++ GY + +YF VFKK TP EYR Sbjct: 460 YDATITDYLTSIRMEKAKNLLKNPYLKIYEVAYGVGYQNEKYFSKVFKKHEGVTPNEYRQ 519 Query: 386 VNS 388 S Sbjct: 520 SYS 522 >UniRef50_A9U777 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U777_PHYPA Length = 561 Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats. Identities = 38/166 (22%), Positives = 79/166 (47%), Gaps = 3/166 (1%) Query: 223 LTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSL 282 L L+R ++ A +M + LH ++ +R+IE R + + Sbjct: 394 LLTQLNRWSVDHAALEEVEMDRVSHYQLHATRKD---AFHYLIHAALRLIEARDDEKKEH 450 Query: 283 TDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKA 342 T+ V + Y+ H + + + D V ++ + + +K+ G + I E+++KA Sbjct: 451 TNQVVSRLNRYVEEHLDSDLSLTTLSDLVHLNPYYMSRLYKQMTGVNLPDYITDERIKKA 510 Query: 343 RSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNS 388 + L++ + L ++EI + G+ S YF +FKK +TP+E+R+ + Sbjct: 511 KELVVESHLKMHEICKKVGFESPAYFTRIFKKKTGSTPQEFREKHQ 556 >UniRef50_B0P6G3 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P6G3_9FIRM Length = 532 Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats. Identities = 45/165 (27%), Positives = 68/165 (41%), Gaps = 2/165 (1%) Query: 222 ELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRS 281 ELT L R+A + A G A L L+ L I RS Sbjct: 360 ELTAELVRLARAYQLDTADVFGPDFAASLRLEAFDSLDELKARLSELCLRISELIRRERS 419 Query: 282 LTDPAVIQ-AMHYIRNHACK-GIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKL 339 + + + A +I H I V+ + D + +S + FK+E G + A + ++ Sbjct: 420 NSTRGIAEGAKQFIAEHFSDPDISVEMLCDHLHVSPAYFSTLFKKETGMSFVAWLTNVRM 479 Query: 340 EKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 ++A LL +T EIS GY YF VFKK + +P +YR Sbjct: 480 DEAVKLLSTTEDKTYEISLKVGYTEPNYFSYVFKKQFGMSPTKYR 524 >UniRef50_A3DK80 Two component transcriptional regulator, AraC family n=3 Tax=Clostridium thermocellum RepID=A3DK80_CLOTH Length = 544 Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats. Identities = 48/283 (16%), Positives = 101/283 (35%), Gaps = 6/283 (2%) Query: 109 SAFLHLKE--KGVNRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETA--- 163 ++ KG+ + A G +++ R+ + + A+ R G Sbjct: 257 MTADFFEKVLKGIKQDANMRATIGIGGAYSSLRDISQSYMGAKAALRHKFILGGNRVIHI 316 Query: 164 PENWQHAQNRLADWLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEEL 223 ++ QN L + I++ D + + + + I + L I +L Sbjct: 317 KTDYNEKQNLLYPAEREKMLVESIMSGDDNALKLAENMFDDIAIGTGDNLKRIAFAANQL 376 Query: 224 TRYLSRVALSSVAQGARQMGYQAAKLLH-RLLDKEEMPLQRILVPPVRVIERRSTDYRSL 282 +S + ++ + ++ + L ++ + Sbjct: 377 VFNISNFIDMQYDFINKLYDFRKFNNMDFSKFSSKDEIKEFFLSFVTELLNVVKEYKPAQ 436 Query: 283 TDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKA 342 + + +A Y+ NH + I + + D + IS++ FK+E G + K+E A Sbjct: 437 NNTLIKKACEYVLNHIDQEITLMTIADYLNISKNYFCSLFKQETGYNFLEYVTKVKMEWA 496 Query: 343 RSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRD 385 + LL E+S+M GY YF +F+K +P EY+ Sbjct: 497 KKLLREGNYKTYEVSEMLGYREASYFSRLFRKYTKLSPAEYKK 539 >UniRef50_Q2RJ70 Transcriptional regulator, AraC family n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RJ70_MOOTA Length = 440 Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats. Identities = 44/199 (22%), Positives = 90/199 (45%), Gaps = 4/199 (2%) Query: 192 DARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLH 251 D + + Q+ + I +L VI + EL +L R + + + + + L Sbjct: 238 DKAKKLLEQLVLQIFIQSKGQLEVIKGRSLELLSFLIRTSTEYGVKFGEVI-HLSDLKLR 296 Query: 252 RLLDKE--EMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHAC-KGIKVDQVL 308 + + + E + +L IE + S + + + + YI+ + + + V ++ Sbjct: 297 EIDEADTVEKAVLWLLAVGNAFIELIAERNSSEGEGIIDRVVEYIQKNYSSESLSVKEIA 356 Query: 309 DAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYF 368 A +S + L + FK+++G ++ I+ ++E+A+ LL T +I ++ G+ YF Sbjct: 357 RASYLSPAYLGQLFKKKMGYSLTEHINKVRIEQAKLLLRQTEQTIESVAIQTGFKERSYF 416 Query: 369 YSVFKKAYDTTPKEYRDVN 387 VFKK +P EYR N Sbjct: 417 CKVFKKITGLSPNEYRRKN 435 >UniRef50_C6D3S3 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3S3_PAESJ Length = 538 Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats. Identities = 42/175 (24%), Positives = 70/175 (40%), Gaps = 7/175 (4%) Query: 222 ELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPL-----QRILVPPVRVIERRS 276 +L + V + G QA +LL L E + L+ ++ + Sbjct: 356 QLLALFIQDFQQMVHYVLQIKGIQAHQLLSDSLSVERFARAGRSAKDALIWIRHIVGKSL 415 Query: 277 TDYRSLTDP--AVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMI 334 SL V QA YI H + I + + V ++ L + FK E G +I + Sbjct: 416 DYMNSLEHSPSVVEQAKTYIHQHLAEEISREDIASHVYLNPDYLTRIFKRETGMSISDYL 475 Query: 335 HAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSE 389 ++L A LL +T L+++ ++ GY + +F +FKK P EYR Sbjct: 476 LQQRLRIAAELLANTDLAVSAVASRIGYANFSHFSRIFKKYMGINPLEYRQSQES 530 >UniRef50_C2KWQ1 AraC family transcriptional regulator n=1 Tax=Oribacterium sinus F0268 RepID=C2KWQ1_9FIRM Length = 311 Score = 155 bits (391), Expect = 3e-36, Method: Composition-based stats. Identities = 35/206 (16%), Positives = 83/206 (40%), Gaps = 13/206 (6%) Query: 199 LQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQ-GARQMGYQAAKLLHRLLDKE 257 ++ + P IG+ + + + V S G ++++L K+ Sbjct: 93 VEAWYEADLTEPWSYFWIGVRGVDADSFFTEVGFSKEKPVGIVHQMDNLLLYINKILQKQ 152 Query: 258 EMPLQRIL-------VPPVRVIERRSTDYR-----SLTDPAVIQAMHYIRNHACKGIKVD 305 + ++ L + ++ + + + Y+ H + I + Sbjct: 153 DYTIEEQLSRSAYMHLFFANLLRGKQEEAHWGGPLKDLGSHSARVRAYLDEHYHEDISIS 212 Query: 306 QVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSL 365 + +GI R++L FK++ G + + +++ A+++L T SI EI+ M GY Sbjct: 213 ALAKEMGIHRAHLFNSFKKDTGYSPKEYLLYIRMQNAKAMLRRTGKSIAEIAYMVGYHDP 272 Query: 366 QYFYSVFKKAYDTTPKEYRDVNSEVM 391 F +F++ +P +YR++ E++ Sbjct: 273 LSFSKIFRQKIGVSPLQYRNMKEEML 298 >UniRef50_UPI0001788EC5 two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788EC5 Length = 524 Score = 155 bits (391), Expect = 3e-36, Method: Composition-based stats. Identities = 53/274 (19%), Positives = 91/274 (33%), Gaps = 26/274 (9%) Query: 129 ESSGKRWATEREYAFRQLVAEEKYR--------GVVYQGLETAPENWQHAQNRLADWLQT 180 E + ++ + + Y+ + + E+ + RL Sbjct: 263 EGRAVHQLEQLHTSYMEALDALDYKMFRGKGKWILYSEVPTEDREDVKSLDIRLDALFTA 322 Query: 181 LPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGAR 240 + + + A +L + V L Q Sbjct: 323 MTEYDIVRIYDELEAIQLLASSIRSKFTIRN------------LAVYIMVKLEGHLQAMN 370 Query: 241 QMGYQAAKL----LHRLLDKEEMP--LQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYI 294 + Y+ A L L LL E M + + + + E + V + + I Sbjct: 371 EELYRMAGLELKNLDILLQFETMDDIFSWLRMKAMEISEMLKNRKSTKNGRLVEEIIENI 430 Query: 295 RNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSIN 354 + + I + + + S + L FKEE G + ++E+AR LL +T L I Sbjct: 431 QARMHENITLRDMANRFSFSPNYLGVLFKEETGHNFSDYVIKLRMERARDLLKTTKLKIY 490 Query: 355 EISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNS 388 EI+ GY L YF FK+ Y TP EYR +S Sbjct: 491 EIASQTGYQYLPYFSRQFKEMYGMTPLEYRRKHS 524 >UniRef50_A8ML53 Transcriptional regulator, AraC family n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8ML53_ALKOO Length = 245 Score = 155 bits (391), Expect = 3e-36, Method: Composition-based stats. Identities = 34/159 (21%), Positives = 72/159 (45%) Query: 229 RVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVI 288 RV V+ + + YQA + L + + + ++ Sbjct: 80 RVIQKGVSTYSSKSKYQAFAKAIHKTSSKIEALNMGKTMVTAYATQVKKSLNKVDNISIR 139 Query: 289 QAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLIS 348 +A+ YI N+ + + +++V + +S+ +FK+E+ + + ++EK++ LL + Sbjct: 140 RAIDYILNNLGETLTLEEVANHANLSKCYFCTQFKKEMKMSFTDYLSHARIEKSKYLLCN 199 Query: 349 TTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVN 387 + SI +I+ + G+ S YF + FKK +PKE+R Sbjct: 200 SNKSILDIAILIGFNSQSYFTTQFKKYTGVSPKEFRAKK 238 >UniRef50_UPI0001C35FBC two component transcriptional regulator, AraC family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35FBC Length = 508 Score = 155 bits (391), Expect = 3e-36, Method: Composition-based stats. Identities = 36/208 (17%), Positives = 74/208 (35%), Gaps = 23/208 (11%) Query: 203 EHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQ 262 E + +P + G+ EL L + +++ Q + + + Sbjct: 301 EETGLHLPPEY-ESGLKKHELEEILDAIDHFGAELSKQEITDQRRVKNLMINGIVRLAQE 359 Query: 263 R----------------------ILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACK 300 R++ + +A+ YI+ + K Sbjct: 360 MGQNTDCSREWEDVWWLTDCLCLWKEECRRIVNSYEESRNGHYSANIRKALAYIQEYYAK 419 Query: 301 GIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMC 360 + V++V +G + + F+ EVG T ++ ++E+A+ L+ + + I EI++ Sbjct: 420 DLLVEEVAAYIGKTPNYFSSIFRTEVGVTFREYLNHYRIERAKELIEESDMMIYEIAEQV 479 Query: 361 GYPSLQYFYSVFKKAYDTTPKEYRDVNS 388 GY YF VFKK +P R + Sbjct: 480 GYSDYTYFSQVFKKMTGISPTSMRGRSK 507 >UniRef50_C5EU48 Response regulator receiver protein n=4 Tax=Clostridiales RepID=C5EU48_9FIRM Length = 546 Score = 155 bits (391), Expect = 4e-36, Method: Composition-based stats. Identities = 34/163 (20%), Positives = 69/163 (42%), Gaps = 1/163 (0%) Query: 223 LTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSL 282 + + + + L ++ L + K+E Q +L +R+ + + + + Sbjct: 380 IIQRIQQHDLDMAQILEEGEEHEDTFALIPKMQKKEDFSQWLLSVALRMNQVMNQERDNT 439 Query: 283 TDPAVIQAMHYIRNHACK-GIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEK 341 + +A YI ++ + V+++ + +S + FK+E G+ A + +L K Sbjct: 440 MKQVIQEAKEYIMDNYQDPDLSVEKICRHLHMSPAYFSTMFKKETGQAYIAYLTEVRLNK 499 Query: 342 ARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 A LL T I+ GY YF VFKK + +P ++R Sbjct: 500 AVELLNKTDDKTYVIASKVGYQEQNYFSYVFKKRFGISPTKFR 542 >UniRef50_B8FQG3 Transcriptional regulator, AraC family n=2 Tax=Desulfitobacterium hafniense RepID=B8FQG3_DESHD Length = 273 Score = 154 bits (390), Expect = 4e-36, Method: Composition-based stats. Identities = 34/182 (18%), Positives = 64/182 (35%), Gaps = 7/182 (3%) Query: 211 EKLCVIGI-----DNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRIL 265 + VI + +E + +L+ + + + ++L Sbjct: 88 WEYAVIHYHIPQHERDEYPLFHKDFSLAHGRSAKVPHLVRQILDIQSIPGAAAKFQTKVL 147 Query: 266 VP--PVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFK 323 + + +AM YIR + + V +V D + R FK Sbjct: 148 FLSLLQEIFTAACGQPGQENSKLIEEAMGYIRLNYADELTVQKVADEFSVERRQFSYLFK 207 Query: 324 EEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEY 383 G + + ++ KA+ LL S S+ ++++ GY YF FKK +P EY Sbjct: 208 RHTGMSPIHYLIECRISKAKELLGSPGCSVKQVAEWVGYTDSLYFSKAFKKYTGVSPSEY 267 Query: 384 RD 385 R+ Sbjct: 268 RE 269 >UniRef50_B0NDZ7 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NDZ7_EUBSP Length = 515 Score = 154 bits (390), Expect = 4e-36, Method: Composition-based stats. Identities = 27/128 (21%), Positives = 59/128 (46%) Query: 261 LQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEK 320 L+ + + + + + + + +I + + ++ + + + IS S+L + Sbjct: 378 LENTVNELFQYTKNQFNGSNGTQNRIIENTIKFIHQNLATALSLEVIAEHLHISASHLSR 437 Query: 321 RFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTP 380 FK+ E++ ++ ++EKA+ L + + EI+ GY YF S+FKK +P Sbjct: 438 TFKKYCDESLTEYVNKTRIEKAKEYLKDSNMLTYEIANQVGYNDATYFSSIFKKYTGFSP 497 Query: 381 KEYRDVNS 388 EYR + Sbjct: 498 SEYRQKYA 505 >UniRef50_B1SDU2 Putative uncharacterized protein n=1 Tax=Streptococcus infantarius subsp. infantarius ATCC BAA-102 RepID=B1SDU2_9STRE Length = 288 Score = 154 bits (390), Expect = 4e-36, Method: Composition-based stats. Identities = 37/202 (18%), Positives = 71/202 (35%), Gaps = 13/202 (6%) Query: 201 VCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMP 260 P +G + LS+ L + + + +L + Sbjct: 87 AFYQADGEHPWTYLWVGFSGSKAENILSKTQLLDHYFCHSTLESKVLDQIVKLTQFRDQK 146 Query: 261 LQ---------RILVPPVRVIERRSTDYRSLTD----PAVIQAMHYIRNHACKGIKVDQV 307 L + +++ + S + + Q I +K+ ++ Sbjct: 147 LDDVTELQLTAELYKLLAFLMKEFPSKAMSDSSILIQNYIKQVKKIIHTQYGNPLKISEI 206 Query: 308 LDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQY 367 + ++RS L K FKEE ++ + ++EK+ LL TT I+EI+ G+P Sbjct: 207 AKKLNLNRSYLYKIFKEETDYSLKDYLIQIRMEKSADLLTRTTFHISEIANAVGFPDALA 266 Query: 368 FYSVFKKAYDTTPKEYRDVNSE 389 F FKK + +P YR + Sbjct: 267 FSKAFKKHFGQSPSHYRKALKK 288 >UniRef50_B7GJK9 DNA-binding response regulator (Contains REC and AraC-type DNA-binding domain) n=1 Tax=Anoxybacillus flavithermus WK1 RepID=B7GJK9_ANOFW Length = 428 Score = 154 bits (390), Expect = 5e-36, Method: Composition-based stats. Identities = 31/122 (25%), Positives = 55/122 (45%) Query: 264 ILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFK 323 + V V + + + Q +++ + C + +++V V ++ K FK Sbjct: 301 MHVDDVPLTDEVEQTTIKTGGSVIEQVEMFLQENYCYDVTLEEVAKYVHLTPYYFSKLFK 360 Query: 324 EEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEY 383 +E G+T + ++EKA+ L+ L++ E GY YF VFKK + TP EY Sbjct: 361 KETGQTFIDYVTHLRIEKAKQLMRDEGLTVKEACYRVGYKDPNYFSRVFKKVTNMTPTEY 420 Query: 384 RD 385 R Sbjct: 421 RQ 422 Score = 56.9 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 23/133 (17%), Positives = 47/133 (35%), Gaps = 9/133 (6%) Query: 215 VIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPP----VR 270 V+ +D+ LT + + + + Q+ + + EE+ L P + Sbjct: 300 VMHVDDVPLTDEVEQTTIKTGGSVIEQVEMFLQENYCYDVTLEEVAKYVHLTPYYFSKLF 359 Query: 271 VIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGI-SRSNLEKRFKEEVGET 329 E T +T + +A +R+ +G+ V + VG + + FK+ T Sbjct: 360 KKETGQTFIDYVTHLRIEKAKQLMRD---EGLTVKEACYRVGYKDPNYFSRVFKKVTNMT 416 Query: 330 IHAMIHAEKLEKA 342 E+A Sbjct: 417 PTEYRQDV-CERA 428 >UniRef50_C6J482 Two component transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J482_9BACL Length = 553 Score = 154 bits (390), Expect = 5e-36, Method: Composition-based stats. Identities = 48/254 (18%), Positives = 95/254 (37%), Gaps = 6/254 (2%) Query: 136 ATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQTLPPQTG--IIAVTDA 193 +E ++ + V YR ++ E+ + Q + + + +D Sbjct: 295 LSELAGSYEEAVKALDYRVILGGNKVIWIEDVESRQTDPLSLDEMKEKELVRCLKVGSDQ 354 Query: 194 RARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRL 253 ++L+ + EL + +VA + ++ A L + Sbjct: 355 ELVNLLEELFKALTDSKASYQDFQLYLLELLTAVIKVA-KDIRVDLDKLFGDGAGFLGQF 413 Query: 254 --LDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACK-GIKVDQVLDA 310 + L +++ + +TD +S + V +A YI H I + +V Sbjct: 414 VKFSHADEAKAWFLDICMKLKQSIATDRQSSYNKLVDEAKEYILAHYGDHDISIAKVCQH 473 Query: 311 VGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYS 370 + IS FK+E T + +++ A+ LL +T L EI++ G+ YF Sbjct: 474 LHISTGYFSNIFKKETKTTFVNYLMGVRMDAAQDLLATTDLKAFEIAERVGFADPNYFSF 533 Query: 371 VFKKAYDTTPKEYR 384 F+K + +PKEYR Sbjct: 534 CFRKKFGISPKEYR 547 >UniRef50_B6FKZ8 Putative uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FKZ8_9CLOT Length = 540 Score = 154 bits (390), Expect = 5e-36, Method: Composition-based stats. Identities = 56/290 (19%), Positives = 114/290 (39%), Gaps = 25/290 (8%) Query: 117 KGVNRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQ----- 171 K + ++G S+ R + +FR+ R V + + ++ +Q Sbjct: 259 KNYTQLEYFGGIGSTVPRI-RSLKQSFREADRAFAARFVEEANQIISQKEFEKSQMEEGL 317 Query: 172 -----------NRLADWLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDN 220 + + + + A +DA I + E++ + + VI + Sbjct: 318 KMQGVVQIGKPREMLQKFLSNGTREEVKAFSDAYISRIEE--ENIRSTMVRQYVVIDVC- 374 Query: 221 EELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYR 280 + + R++ ++ Q + + + +H L + ++ ++ IE R + Sbjct: 375 IVILSFCERISSANRLQEEAEELQKMMQKIHSLSEIKKY----VVRLLNEAIELRDAESG 430 Query: 281 SLTDPAVIQAMHYIRNHAC-KGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKL 339 + A I NH + I ++ V +VG+S S F +E G+T + ++ Sbjct: 431 RRYSDLIAAAKKEIENHYMTEEISLNTVAISVGMSPSYFSSIFSKEAGKTFVEYLTEVRI 490 Query: 340 EKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSE 389 EKA+ L+ +++ +EI GY YF +FKK +PKEYR E Sbjct: 491 EKAKEFLMCSSMKTSEIGYEVGYKDPHYFSYIFKKVQGCSPKEYRARGKE 540 >UniRef50_A6NRT4 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NRT4_9BACE Length = 534 Score = 154 bits (390), Expect = 5e-36, Method: Composition-based stats. Identities = 41/193 (21%), Positives = 75/193 (38%), Gaps = 5/193 (2%) Query: 197 HILQVCEHLHIPVPEKLCVI---GIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRL 253 + Q+ E L V E + + E+ + +A S AQ G ++ Sbjct: 337 QVEQLVEELIDRVRETRLSLSQCHLFFLEIVTAMISLARSGGAQVEETFGSGFTGMVSVS 396 Query: 254 LDKEEMPLQRILVP-PVRVIERRSTDYRSLTDPAVIQAMHYIRNHACK-GIKVDQVLDAV 311 L R L+ +++ E V QA +I + + V+ + + Sbjct: 397 DFHSPEELGRWLLERCLKLRELLGRQRTDSAWKTVEQAKAFIAANYADCDLSVESMCAHL 456 Query: 312 GISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSV 371 +S + FK E G++ A + ++++A +L T I++ GY YF V Sbjct: 457 HLSATYFSALFKRETGQSFTAYVTELRMDQAARMLRDTDEKTYLIAEKTGYTDPNYFSYV 516 Query: 372 FKKAYDTTPKEYR 384 FK+ + TP +YR Sbjct: 517 FKRHFGVTPSKYR 529 >UniRef50_B0A7Q6 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A7Q6_9CLOT Length = 241 Score = 154 bits (389), Expect = 5e-36, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 82/183 (44%), Gaps = 4/183 (2%) Query: 207 IPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILV 266 I V E +C ++ + +Y+ L ++ + + + + L + Q +L Sbjct: 62 IKVSEDICYKIVNISKPNKYIGFFVLGPISTCSSRKTNDSITYI--PLHCFDYCAQILLS 119 Query: 267 PPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEV 326 + T +P + +A+ Y+ H K I + + + + +++S FK Sbjct: 120 IATDKFNK--TMSTKSFNPHIKKAIEYVHKHYDKSINITDLCEHLNLNKSYFCSTFKTTT 177 Query: 327 GETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDV 386 G T ++ ++EK++ LL+ T L++ +I+ G+ + Y+ ++FKK TP +YR Sbjct: 178 GHTFCHFLNHFRIEKSKKLLLETDLNMLDIALSVGFNNQNYYCTMFKKFTGKTPLQYRVC 237 Query: 387 NSE 389 N Sbjct: 238 NKH 240 >UniRef50_B1QUU6 Two-component response regulator n=3 Tax=Clostridium butyricum RepID=B1QUU6_CLOBU Length = 351 Score = 154 bits (389), Expect = 5e-36, Method: Composition-based stats. Identities = 38/117 (32%), Positives = 53/117 (45%) Query: 271 VIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETI 330 I R + + + YI + + I ++ V A +S L K FK+ G Sbjct: 230 YIIREKLIGNREVNILLNPVLIYISENYSEKITLESVSKACNLSVFYLSKLFKKNTGMKF 289 Query: 331 HAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVN 387 I+ K+EKA+ LL +T +SI IS GY YF VFKK TP YR+ N Sbjct: 290 IDYINLYKIEKAKQLLENTDMSIINISMSLGYDESGYFSKVFKKVVGVTPSAYRNKN 346 >UniRef50_C6D708 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D708_PAESJ Length = 766 Score = 154 bits (389), Expect = 6e-36, Method: Composition-based stats. Identities = 39/129 (30%), Positives = 64/129 (49%), Gaps = 1/129 (0%) Query: 261 LQRILVPPV-RVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLE 319 +++ L+ R+I+ +TD + A+ Y+ + I VD V + V S S L Sbjct: 630 MEKCLIEMCDRIIDYHREKRSKMTDVTLQLAIDYMDANFNNNISVDTVAEYVERSSSYLS 689 Query: 320 KRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTT 379 + FKE +G TI+ + ++ +A LL LSI EI GY ++ YF +FK T Sbjct: 690 RIFKESMGMTINDYLIQLRIRRATELLGQVNLSIEEICHEIGYANVSYFNKIFKARTGLT 749 Query: 380 PKEYRDVNS 388 P +YR ++ Sbjct: 750 PGQYRQQHA 758 >UniRef50_C7H4C8 Two Component Transcriptional Regulator, AraC family n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H4C8_9FIRM Length = 416 Score = 154 bits (389), Expect = 6e-36, Method: Composition-based stats. Identities = 44/222 (19%), Positives = 84/222 (37%), Gaps = 8/222 (3%) Query: 168 QHAQNRLADWLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYL 227 ++NR+ D + + I A+ E K+ V+ L Sbjct: 202 YESENRILDAVARGDEEAAIEAMHQHSRFTYGGRFEGTLYQQKNKMIVLN--------TL 253 Query: 228 SRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAV 287 R A+ + ++K + + E+P + + PAV Sbjct: 254 LRKAIEPSKVHPYYIDAISSKYSRIIEEANEVPNEMMWQMTRDYCAYVRRYSLKEYSPAV 313 Query: 288 IQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLI 347 + M+Y+ + + + + + IS S L FK+E G T+ I+ +++ +A LL+ Sbjct: 314 QKVMNYVNLNVAEPLTLKSLAAMCFISPSYLSALFKQETGSTLIDYINTQRVNRAAQLLV 373 Query: 348 STTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSE 389 +I +++ G + YF +FKK TP YR + E Sbjct: 374 QNNHTIAAVAEEVGILDVNYFTKIFKKTLGVTPTRYRREHKE 415 >UniRef50_C9BAM1 Helix-turn-helix domain-containing protein n=12 Tax=Enterococcus faecium RepID=C9BAM1_ENTFC Length = 483 Score = 154 bits (389), Expect = 6e-36, Method: Composition-based stats. Identities = 40/179 (22%), Positives = 88/179 (49%), Gaps = 8/179 (4%) Query: 212 KLCVIGIDNEELTRYLSRVALSSVAQGARQMGY-QAAKLLHRLLDKEEMPLQRILVPPVR 270 +L + ++ + +L + + Y Q + +H+ +E LQ++L+ ++ Sbjct: 311 QLAAMMPEDIRYSSFLLFMEIQRELIDLEDEEYLQGIEKIHQAKTVQE--LQQLLLSFIK 368 Query: 271 VIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETI 330 +R+ V + + + H + + + +V + + ++ L + FK+E ++ Sbjct: 369 KHQRQ-----KKYSDNVEKVIVILHQHYQEPLTLKEVSENLHLNVMYLGQLFKKETKKSF 423 Query: 331 HAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSE 389 A ++ ++EKA+ LL+ + +INEI+ GY + YF +FKK +PKEYR+ + E Sbjct: 424 SAYLNHLRMEKAKQLLLHSNQNINEIASEIGYNNTTYFSKLFKKIVGRSPKEYRENSGE 482 >UniRef50_Q05587 Regulatory protein pocR n=57 Tax=Gammaproteobacteria RepID=POCR_SALTY Length = 303 Score = 153 bits (388), Expect = 7e-36, Method: Composition-based stats. Identities = 41/183 (22%), Positives = 80/183 (43%), Gaps = 11/183 (6%) Query: 211 EKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDK-------EEMPLQR 263 E + ++ +D+ R+ + L + + +M Y LL +++ Sbjct: 115 ELVNILNVDD----RWQADPELLNEFRNVPEMDYSRVIASADLLKLIVENCLKKQLNFVV 170 Query: 264 ILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFK 323 I P + ++T + D + +A+ YI H ++++ V V +S K FK Sbjct: 171 IKDNPQQSEANKTTRGPTPHDSKMKKALRYIDAHLSDDLRLEDVASHVYLSPYYFSKLFK 230 Query: 324 EEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEY 383 + G +A ++ +++ AR LL + SI I++ G+ YF VF++ Y TP+ Y Sbjct: 231 KYQGIGFNAWVNRQRMVSARELLCHSDWSIASIARNLGFSQTSYFCKVFRQTYQVTPQAY 290 Query: 384 RDV 386 R Sbjct: 291 RQQ 293 >UniRef50_C6CWF4 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CWF4_PAESJ Length = 451 Score = 153 bits (388), Expect = 8e-36, Method: Composition-based stats. Identities = 33/133 (24%), Positives = 58/133 (43%), Gaps = 1/133 (0%) Query: 257 EEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRS 316 E + + ++R T + +A YI H + + +++ + V ++ Sbjct: 319 EHSDSEDQRSYVISALQRIREQREQQTINVMDKAKQYIGLHFTEELSLEETAEHVHLNPH 378 Query: 317 NLEKRFKEEVGETIHAMIHAEKLEKARSLLISTT-LSINEISQMCGYPSLQYFYSVFKKA 375 K FK++VG T + ++EKA+ L+ S L++ E+ GY YF VFK+ Sbjct: 379 YFSKVFKQQVGATFIDYLTGLRIEKAKQLISSADELALKEVCFEVGYKDPNYFSRVFKRV 438 Query: 376 YDTTPKEYRDVNS 388 TP EYR Sbjct: 439 TGLTPTEYRSQAK 451 >UniRef50_C6CVZ4 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CVZ4_PAESJ Length = 288 Score = 153 bits (388), Expect = 8e-36, Method: Composition-based stats. Identities = 43/191 (22%), Positives = 76/191 (39%), Gaps = 9/191 (4%) Query: 204 HLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGAR-----QMGYQAAKLLHRLL---D 255 P K+ + + + R+ L+ R ++ Q + R+ Sbjct: 90 QYDSASPLKMHWLAFTGSQAEMLVRRIGLTEHKPYLRSRLTTELANQLQACMERMKNWQK 149 Query: 256 KEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISR 315 ++ LQ +L ++ R + D + Y++ H +GI V + + G+ R Sbjct: 150 DGDLQLQMMLYQLFEMLSRPLPEASEEKDWL-KACLQYMQTHYAEGISVTDLAEWSGMHR 208 Query: 316 SNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKA 375 S+L RFK+ G + + ++E+A +L S TLSI +IS GY L F F Sbjct: 209 SHLSSRFKQSFGISPREYLIMLRMERAVEMLQSRTLSITDISLSLGYTDLYTFSRAFSTY 268 Query: 376 YDTTPKEYRDV 386 +P YR Sbjct: 269 TGMSPSNYRSK 279 >UniRef50_C6LGW7 DNA-binding response regulator n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LGW7_9FIRM Length = 504 Score = 153 bits (388), Expect = 8e-36, Method: Composition-based stats. Identities = 30/127 (23%), Positives = 61/127 (48%) Query: 261 LQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEK 320 L+ + +I + + + +A+++IR H + I ++ + + + I+ L Sbjct: 378 LEDCFRREIEIILSEKDKKEDIRNYTIRRAINFIREHYRENISLELLAEHLEITPEYLST 437 Query: 321 RFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTP 380 F +EVG + ++ A+ LL ++ I EIS+ GY +YF VFK+ +P Sbjct: 438 LFNKEVGINFTTFLKRFRISHAKRLLKGSSKKIYEISEEVGYHDPKYFNRVFKEEVGVSP 497 Query: 381 KEYRDVN 387 +YR ++ Sbjct: 498 GDYRQMS 504 >UniRef50_Q5QL43 Two-component response regulator n=2 Tax=Geobacillus RepID=Q5QL43_GEOKA Length = 258 Score = 153 bits (388), Expect = 9e-36, Method: Composition-based stats. Identities = 38/173 (21%), Positives = 85/173 (49%), Gaps = 8/173 (4%) Query: 226 YLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMP-LQRILVPPVRVIERRSTDYRSLTD 284 +S + + + Q A G+ + L + E + L+RIL P + ++ ++ + Sbjct: 81 IVSHLQMFEIVQSAINAGF-SGYYLKPISRTELLSGLERILTPSLDTMKTKANQHYGKGM 139 Query: 285 PAV------IQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEK 338 ++ A+ YI+++ + +++V V +S+S+ + FK G T + + Sbjct: 140 ESIDLANPIESALRYIQDNYHLPLTLNEVASMVYLSQSHFSRLFKSATGMTFVEYLTQVR 199 Query: 339 LEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSEVM 391 ++K++ LL ++L I+ I+ G+ + YF + FK+ TP EYR++ ++ Sbjct: 200 IQKSKYLLKMSSLPIDVIAHKTGFSNASYFATTFKRLEGKTPTEYRELLQKIY 252 >UniRef50_B1B7W8 Transcriptional regulator, AraC family protein n=1 Tax=Clostridium botulinum C str. Eklund RepID=B1B7W8_CLOBO Length = 769 Score = 153 bits (388), Expect = 9e-36, Method: Composition-based stats. Identities = 47/205 (22%), Positives = 76/205 (37%), Gaps = 1/205 (0%) Query: 186 GIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQ 245 I R ++L + ++ I + L + + Sbjct: 565 AIKLGNKERTNNLLDDIFDELLKFSHDNSILYIKTLAINSKNLIDNLYLLKNEKSTLNID 624 Query: 246 AAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGI-KV 304 + + L I S V +A +YI + + V Sbjct: 625 IFLKNLSKYEFADSAKYWFLDLYETTINTLSDKKLYKNTETVEKAKNYIEKNYTNSLLSV 684 Query: 305 DQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPS 364 + V + V IS + L FK GE+I I+ + E A+ LLI+T L+I +IS GY + Sbjct: 685 ELVSEYVNISPNYLRTLFKNITGESISKYINICRFENAKKLLINTDLTILDISSKVGYSN 744 Query: 365 LQYFYSVFKKAYDTTPKEYRDVNSE 389 YFY+ FKK Y +P ++R N E Sbjct: 745 NNYFYTAFKKTYGISPSQFRRNNKE 769 >UniRef50_C6CY25 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CY25_PAESJ Length = 535 Score = 153 bits (388), Expect = 9e-36, Method: Composition-based stats. Identities = 53/259 (20%), Positives = 100/259 (38%), Gaps = 14/259 (5%) Query: 138 EREYAFRQLVAEEKY-------RGVVYQGLETAPENWQHAQNRLADWLQTLPPQTGIIAV 190 E A+ + +A K + + Y L E + TL + Sbjct: 272 ELSKAYDEALAAAKQSMFAGIGKAISYSELAGVREADGPPIKVSQSHIHTLLYGLQSKEL 331 Query: 191 TDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLL 250 D Q+ + P+ + +I ++ + + +S Q + Q L Sbjct: 332 HDYMGSLFDQLGKRQD---PDLVQLISLELIMILTAI-WPDVSHDQQHVVHLKKQYFDQL 387 Query: 251 HRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDA 310 +L E+ +R + + + ++I+A +I+ H + I + + Sbjct: 388 SKLETIEQ--SRRWFLQAFAELLEHMIRIYNSDRNSIIKATQFIQQHYQQEISLQSISHF 445 Query: 311 VGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYS 370 V +S++ FK+EVGE+ + ++EKA++LL + ++ QM G +YF Sbjct: 446 VHLSKNYFANLFKKEVGESFLEYVTRVRIEKAKALLA-GEMKAVDVGQMVGIQDPKYFSK 504 Query: 371 VFKKAYDTTPKEYRDVNSE 389 VFKK TP EYR + E Sbjct: 505 VFKKITGATPSEYRSLVKE 523 >UniRef50_C7H5Z6 Transcription regulator, AraC family n=2 Tax=Ruminococcaceae RepID=C7H5Z6_9FIRM Length = 319 Score = 153 bits (387), Expect = 9e-36, Method: Composition-based stats. Identities = 39/204 (19%), Positives = 87/204 (42%), Gaps = 15/204 (7%) Query: 199 LQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEE 258 ++ E P + V+G+ E+ + + R+ + LLH LL + + Sbjct: 106 VEHTELSLNASPLEYIVLGVSGIEI--LFGKADSTYAIFNCRENRERMVTLLHMLLAEAD 163 Query: 259 MPL-----------QRILVPP--VRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVD 305 L + +L+ + + + + ++ Y+ N+ + I +D Sbjct: 164 RSLDGCETVCQDLLEVLLIWLVRCTTLSLQVEESPRSDNRECVEIKRYLDNNYREEISLD 223 Query: 306 QVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSL 365 + + I++ L F++ G + ++ ++E+++ +L +T S+ +IS++ G+ S Sbjct: 224 TLAEVAHINKYYLAHTFQKAYGISPITYLNRRRIEESKYMLGNTGYSLAQISELMGFSSP 283 Query: 366 QYFYSVFKKAYDTTPKEYRDVNSE 389 YF F+KA TP EYR + Sbjct: 284 SYFSQCFRKAEGLTPNEYRRQVRQ 307 >UniRef50_A6M2F4 Response regulator receiver protein n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6M2F4_CLOB8 Length = 531 Score = 153 bits (387), Expect = 9e-36, Method: Composition-based stats. Identities = 32/137 (23%), Positives = 61/137 (44%) Query: 253 LLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVG 312 L+ + L I + + + +A YI +H + I V + + + Sbjct: 382 LISLKNCSRSDALRITRDFIIQILQTDIGESHEIIRKAKQYINDHLNEDISVYSIAEMLY 441 Query: 313 ISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVF 372 ++ + K FK GE + I ++++KA+SLL +T++ +I+ + GY YF F Sbjct: 442 LTPTYFSKLFKHSTGEGCNNYIIRKRIQKAKSLLETTSMKTGKIATLVGYKDTNYFSLAF 501 Query: 373 KKAYDTTPKEYRDVNSE 389 KK +P E+R+ Sbjct: 502 KKQTGMSPTEFREKGGS 518 >UniRef50_UPI0001C3678C two component transcriptional regulator, AraC family protein n=2 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C3678C Length = 539 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 45/174 (25%), Positives = 75/174 (43%), Gaps = 25/174 (14%) Query: 213 LCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVI 272 + DNEE + RVALSS H +L E L + + V+ Sbjct: 381 YAHMLFDNEENNKIYGRVALSS----------------HNMLQYLEYLLSKA-MEYKDVV 423 Query: 273 ERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHA 332 ER V Y+ +H + + D + V ++ L + FK+E+G +I + Sbjct: 424 ER--------PHTIVDTIRDYMDHHFQENLSRDDLSRLVFLNPDYLSRLFKKEMGLSISS 475 Query: 333 MIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDV 386 + ++++ A+ LL +T ++ IS GY + YF VFK+ +P EYR Sbjct: 476 YLIQKRIDLAKELLSTTRTPVSVISSQAGYDNFAYFTKVFKEKTGMSPNEYRKK 529 >UniRef50_C6CSY2 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CSY2_PAESJ Length = 533 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 46/273 (16%), Positives = 99/273 (36%), Gaps = 10/273 (3%) Query: 117 KGVNRFAFYGLPESSGKRWATEREYAFRQLVAEEK---YRGVVYQGLETAPENWQHAQNR 173 + + +A GL + + + AF + RG + + + + Sbjct: 258 RMLQLYAVVGLSDPRER--LDQLPEAFEEASERLYGSTLRGTEFSVMSAGTPHERGEM-- 313 Query: 174 LADWLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALS 233 L + L Q I+ A R +L + E L + +EL + + Sbjct: 314 LGGFDAKL-LQQAIVGGQTASVRRMLGEFAR-KAEMSESLTIRS-AQKELRKLGAAAGSE 370 Query: 234 SVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHY 293 A + + ++ + + R+ S + + + Y Sbjct: 371 WPAITTASPLLADQRAIDSVMTLSALHAYVAELSAAIEAHIRARASSSDASNPMSEIVAY 430 Query: 294 IRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSI 353 + H + + + + + S L ++FK G + +++EKA LL + + Sbjct: 431 LDGHYFEDVGLIDMATRYHMDPSYLSRQFKAATGVNFIEYVTRKRMEKACELLRESDRKV 490 Query: 354 NEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDV 386 ++I+++ GY + +YF VFKK TP E+R++ Sbjct: 491 SDIAELVGYENQRYFSQVFKKFTGQTPSEFREL 523 >UniRef50_A3DHI5 Transcriptional regulator, AraC family n=5 Tax=Clostridium RepID=A3DHI5_CLOTH Length = 302 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 32/134 (23%), Positives = 61/134 (45%), Gaps = 4/134 (2%) Query: 256 KEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMH----YIRNHACKGIKVDQVLDAV 311 + + + V R ++ + P + + + YI N+ + I + + V Sbjct: 162 LNYLLVMELFVLISRALKMEWENSIKNKSPKIKELIQASVNYINNNYERDISLKDIARYV 221 Query: 312 GISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSV 371 +S S + FKEE+G + + ++E+A+ LL T I++I+ G+ + Q F + Sbjct: 222 FLSTSYFTRAFKEEMGISPINYLLKIRVERAKELLKDTDNRISDIALSVGFSNQQRFNDI 281 Query: 372 FKKAYDTTPKEYRD 385 FKK TP +YR Sbjct: 282 FKKYVKLTPLQYRK 295 >UniRef50_A8RMQ2 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RMQ2_9CLOT Length = 502 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 32/122 (26%), Positives = 55/122 (45%), Gaps = 1/122 (0%) Query: 268 PVRVIERRSTDYRSLTDPAVIQAMHYIRNHACK-GIKVDQVLDAVGISRSNLEKRFKEEV 326 R+ E + + V++A+ Y+ + + ++ A G+S + FK E Sbjct: 375 LKRICEYVGSQKSGVYSRPVVKALAYMEENYSSPDLSMEDTAVAAGLSSARFSTSFKSET 434 Query: 327 GETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDV 386 G T + ++EKA+ L+ I EI+ M GY ++ YF + FKK P EYR+ Sbjct: 435 GVTFTDYLLKLRMEKAKDLMRDPNRKIYEIAMMTGYSNIPYFSTAFKKYTGCPPSEYREK 494 Query: 387 NS 388 Sbjct: 495 QH 496 >UniRef50_Q65KY8 Probable transcriptional regulator n=1 Tax=Bacillus licheniformis ATCC 14580 RepID=Q65KY8_BACLD Length = 760 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 38/199 (19%), Positives = 67/199 (33%), Gaps = 1/199 (0%) Query: 191 TDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLL 250 D R I L ++ + + + + S + + L Sbjct: 561 RDEVERRIRLFIRELSEKGKTEIRIQPGMMQLFAKIQEEIFHSGLHPYELFSRKNLLQEL 620 Query: 251 HRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDA 310 L + E + ++ V Q + I I ++ D Sbjct: 621 SELREPERAVGWMMERCISPYLKEMEGRKNRQQKRLVEQVLEMIHQDYMNDISLESCADR 680 Query: 311 VGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYS 370 G + L K FK+ G + ++EKA+ LL+ T I+++S+ GY YF Sbjct: 681 AGTNSYTLSKAFKQVTGINFIDYVTRLRIEKAKELLLETNKKIHDVSEEVGYRH-SYFNR 739 Query: 371 VFKKAYDTTPKEYRDVNSE 389 +FKK P YR ++ E Sbjct: 740 IFKKQVGIPPSRYRQIHQE 758 >UniRef50_C6CXJ2 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CXJ2_PAESJ Length = 289 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 37/186 (19%), Positives = 85/186 (45%), Gaps = 11/186 (5%) Query: 210 PEKLCVIGIDNEELTRY-----------LSRVALSSVAQGARQMGYQAAKLLHRLLDKEE 258 P ++ + + +E +R + R S + R++ A+ + Sbjct: 90 PWEVLWLNLSGDEASRIWDLVIAQEGPIIRRDPNSPIIHAFRKLLRSIAEEKITDKYQLS 149 Query: 259 MPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNL 318 + ++ V+ S + + + + +A +++ H + + +DQ+ + G+++ +L Sbjct: 150 AKVYEWMIALVQTSREVSREISTSSSSLIQRAKDFMKQHYAQPLTLDQLAEHCGVNKYHL 209 Query: 319 EKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDT 378 + F++ + A + ++E A +LL +T L + I +MCG+ + YF VF++ Sbjct: 210 CRLFQKSDQTSPLAYLRDRRMEAAVALLRTTELPVQTIGEMCGFENSSYFGKVFREYMSM 269 Query: 379 TPKEYR 384 TPKEYR Sbjct: 270 TPKEYR 275 >UniRef50_C6J6V9 Response regulator n=2 Tax=Bacillales RepID=C6J6V9_9BACL Length = 517 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 40/250 (16%), Positives = 93/250 (37%), Gaps = 11/250 (4%) Query: 141 YAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQTLPPQTGIIAVTDARARHILQ 200 A++Q + + + + + + + Q A + + Sbjct: 273 TAYKQALQALSHHFYHPESSIFYYSHQKERSEVALEQAEVYVKQMKSALAEHAHEKFMDG 332 Query: 201 VCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMP 260 + ++ E+ +D E+ + + L + + + +A + L Sbjct: 333 LSRWENLIRTEE----CLDEAEVQKVYEGL-LFMMDRNGSKAKTEAEEEL--TARGAFED 385 Query: 261 LQRILVPPVRVIERR----STDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRS 316 +++ V E+R + + + YI +H + + D +S + Sbjct: 386 FEQMSSAYRTVFEQRLGGGTNASFKGYSQLIRNILEYIEHHYQDSLSLKLFADLFQVSPN 445 Query: 317 NLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAY 376 + + FKEEVG+ + I+ ++ KA+ LL I E+++ G+ + +F VF K Sbjct: 446 YVSRLFKEEVGQGLFDYINELRINKAKELLKDYRYKIYEVAEKVGFSNQAHFAIVFNKYT 505 Query: 377 DTTPKEYRDV 386 +PK+YR+ Sbjct: 506 GVSPKQYRNE 515 >UniRef50_C6J4K9 Two component transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J4K9_9BACL Length = 403 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 62/396 (15%), Positives = 137/396 (34%), Gaps = 42/396 (10%) Query: 20 RQVVEGVGEYLQASQSEWDIFIEEDFRARIDKIKDWLGDGVIADFDDKQIEQALADVDVP 79 R + EG+ ++ E+ + + E + + D V+ D + Sbjct: 10 RAIREGIKRTIKRIYPEYGVELAEGAEEAAKLMGEKRFDIVLTDILMPGMN--------- 60 Query: 80 IVGVGGSYHLAESYPPVHYIATD---NYALVESAFLHLKEKGVNRFAFYGLPESSGKRWA 136 G+ +P V ++ +A + A G + + ++ + Sbjct: 61 --GLEFMRIFKRRFPRVKWVVISAHSEFAYAQEAVR----LGARDYLLKPIGKTRLQEII 114 Query: 137 TEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQN--------RLADWLQTLPPQTGII 188 + R+ K ++ L+ E L +++ ++ Sbjct: 115 STLATEVREESELTKEEELLKANLKYLREGVFQRLASGLDIGNLDLTPFMEDYQSFYLMM 174 Query: 189 AVTDA------RARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQM 242 DA I++ I + V+ D + L ++ + + ++ Sbjct: 175 VQMDAGDKSVRLEHFIVENVLSELIERHGRGFVVSYDRQSLLGLITPREPERIERFQEEV 234 Query: 243 GYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSL----------TDPAVIQAMH 292 L L +V+ R S + A+ A+ Sbjct: 235 KAHLKHYLKVPFQIVHSGLNNDFKSVPQVVMRMKQASDSPVALLDPPKGSGEKAIEVALQ 294 Query: 293 YIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLS 352 YI+ H + + +++V V ++ + + FK++VG + + +LE+A+ LL++ L Sbjct: 295 YIKEHYNEELSLEKVASVVFLNPAYFSQLFKQKVGLGYKEYVTSLRLEQAKQLLLNPKLK 354 Query: 353 INEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNS 388 I EI++ GY +++F +F+K Y TP EYR + Sbjct: 355 IAEIAEYLGYQDIRHFAQMFRKKYQVTPNEYRQQQN 390 >UniRef50_C5RJU1 Two component transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RJU1_CLOCL Length = 540 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 32/165 (19%), Positives = 71/165 (43%), Gaps = 2/165 (1%) Query: 222 ELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPP-VRVIERRSTDYR 280 E+ + + A SS A G + + ++ L ++++ D + Sbjct: 371 EMLTAILKAAQSSNVDLASIFGRDYNIFVELYSFNDLKHVKTWLKEISLKIMSHIMKDRK 430 Query: 281 SLTDPAVIQAMHYIRNHACK-GIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKL 339 + + +A YI + + ++ + + + IS++ FK+E T + + ++ Sbjct: 431 DTCELLIEKAKDYIHRNYSDSELNINDLCNHLHISQTYFSLLFKKETKMTFINYLTSIRM 490 Query: 340 EKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYR 384 ++A+ LL +T + E+++ GY YF FK+ +P EYR Sbjct: 491 DEAKQLLKTTDMKTFEVARKVGYSEPNYFSYSFKRYLGMSPSEYR 535 >UniRef50_B5YFJ6 Transcriptional regulator, putative n=2 Tax=Dictyoglomus RepID=B5YFJ6_DICT6 Length = 287 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 38/135 (28%), Positives = 68/135 (50%), Gaps = 1/135 (0%) Query: 254 LDKEEMPLQRILVPPVRVIERRSTD-YRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVG 312 L + + ERR+ D + ++YI + K + +D++ V Sbjct: 152 LYIKSLLFDIFWRVFKYYAERRNQDGRLGYKIERIKDVLNYINQNYNKNLSLDELSRQVD 211 Query: 313 ISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVF 372 +S+ L + FKE + + I+ +++KA LLI+T +S++EI+ CG+ ++ YF VF Sbjct: 212 MSKFYLCRLFKESLRMSPVEYINKVRVDKAMELLINTDMSVSEIAFECGFDNISYFIKVF 271 Query: 373 KKAYDTTPKEYRDVN 387 KK TTP ++R N Sbjct: 272 KKYMHTTPLKFRKQN 286 >UniRef50_C0FTY3 Putative uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FTY3_9FIRM Length = 250 Score = 153 bits (386), Expect = 1e-35, Method: Composition-based stats. Identities = 42/213 (19%), Positives = 88/213 (41%), Gaps = 16/213 (7%) Query: 180 TLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGA 239 +I + L+VC++L+ PE +I A S Sbjct: 45 ENESPDIVITDIQMPGVNGLEVCKYLYETRPETQVII------------LTAYSDFDYAK 92 Query: 240 RQMGYQAAKLLHRL--LDKEEMPLQRILVPPVRVIERRSTDYRSLTDP--AVIQAMHYIR 295 + Y A + + ++ +D+ L++ ++ + + +++ + Q Y+ Sbjct: 93 FAIKYNACEYVLKISIMDELPEALEKATGKLTQLKKEIEKEEIAVSGQRTLLQQIDQYVE 152 Query: 296 NHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINE 355 + I +D++ D + ++RS L + +K + G + I ++E A+ L++T + E Sbjct: 153 QNFKNKISLDEIADELHVNRSYLSRFYKNKTGINLFDTILNLRIEAAKEYLLNTDMKTYE 212 Query: 356 ISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNS 388 IS+ G YF +FKK +PKE+R Sbjct: 213 ISEAIGVDDAGYFSKMFKKITGVSPKEFRKQGK 245 >UniRef50_A5ZMK6 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZMK6_9FIRM Length = 529 Score = 153 bits (386), Expect = 1e-35, Method: Composition-based stats. Identities = 44/245 (17%), Positives = 94/245 (38%), Gaps = 7/245 (2%) Query: 145 QLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQTLPPQTGIIAVTDARARHILQVCEH 204 + +AE G A + + + + + L + + + R+ + V + Sbjct: 291 RSLAERLLEGNSKMLEADASNGVLYEKKLVDKFTRNL--GSALQTLDVEEIRNTINVIYN 348 Query: 205 LHIPVPEKLCVIGIDNEELTRYLSRVALSSVA-QGARQMGYQAAKLLHRLLDKEEMPLQR 263 + P V G + E+ R + + + ++ + + + Sbjct: 349 ETMETPG---VHGWEILEMIRQCGSIFIMRLDVPDKAELQKEFDNKCDNCVTVNAL-FTC 404 Query: 264 ILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFK 323 +L + + + + V A YI NH + I +++V D VG++ + FK Sbjct: 405 LLDFMLTKVNQMIALREEDSVRPVRLAKQYIHNHYQEQITLEEVSDYVGLTPAYFSVMFK 464 Query: 324 EEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEY 383 +E + E++E A+ LL +TLS+ +I + GY ++F +F+K P Y Sbjct: 465 KETEIGFAKYLINERIEGAKDLLRESTLSVADICRKVGYNDPKHFTRLFEKNVGVKPAVY 524 Query: 384 RDVNS 388 R + Sbjct: 525 RKLYG 529 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.313 0.147 0.431 Lambda K H 0.267 0.0453 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,589,292,987 Number of Sequences: 3077464 Number of extensions: 131220140 Number of successful extensions: 464587 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 22385 Number of HSP's successfully gapped in prelim test: 5052 Number of HSP's that attempted gapping in prelim test: 401457 Number of HSP's gapped (non-prelim): 36763 length of query: 392 length of database: 1,040,396,356 effective HSP length: 131 effective length of query: 261 effective length of database: 637,248,572 effective search space: 166321877292 effective search space used: 166321877292 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 94 (40.7 bits)