BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (747 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P77172 Inner membrane protein yfgF n=114 Tax=Enterobact... 1539 0.0 UniRef50_A8GHP9 Diguanylate cyclase/phosphodiesterase n=1 Tax=Se... 611 e-173 UniRef50_B2VE87 Inner membrane protein YfgF n=3 Tax=Erwinia RepI... 561 e-158 UniRef50_C1MAR9 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ci... 461 e-128 UniRef50_C5BBK9 Cyclic diguanylate phosphodiesterase (EAL) n=2 T... 406 e-111 UniRef50_C1M7D0 Putative uncharacterized protein n=1 Tax=Citroba... 367 e-100 UniRef50_P23842 Uncharacterized protein yfeA n=98 Tax=Enterobact... 316 3e-84 UniRef50_D0ZFH2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ed... 303 2e-80 UniRef50_A7MP46 Putative uncharacterized protein n=2 Tax=Bacteri... 296 2e-78 UniRef50_A3JCF9 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 218 9e-55 UniRef50_A6F7G4 PAS sensor diguanylate cyclase and phophodiester... 214 1e-53 UniRef50_Q21LK5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Sa... 199 2e-49 UniRef50_Q2SJ14 Predicted signal transduction protein containing... 196 2e-48 UniRef50_B7K4E7 Response regulator receiver modulated diguanylat... 189 2e-46 UniRef50_A6AJX1 FOG: EAL domain protein n=3 Tax=Vibrio harveyi R... 189 4e-46 UniRef50_B0C6M6 PAS sensor diguanylate cyclase/phophodiesterase,... 189 5e-46 UniRef50_Q2YC85 Diguanylate cyclase/phosphodiesterase with PAS/P... 185 6e-45 UniRef50_C0N6D3 Putative uncharacterized protein n=1 Tax=Methylo... 184 1e-44 UniRef50_B0BZ23 Diguanylate cyclase/phosphodiesterase with PAS/P... 184 1e-44 UniRef50_A0Y401 PAS sensor diguanylate cyclase/phophodiesterase ... 184 1e-44 UniRef50_B4X4M1 PAS fold family n=2 Tax=Alcanivorax RepID=B4X4M1... 183 2e-44 UniRef50_B2J5P2 Diguanylate cyclase/phosphodiesterase with PAS/P... 183 2e-44 UniRef50_A4Y0K2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ps... 183 2e-44 UniRef50_UPI0001C30E99 diguanylate cyclase/phosphodiesterase wit... 182 3e-44 UniRef50_B9ZMB9 Diguanylate cyclase/phosphodiesterase with PAS/P... 182 6e-44 UniRef50_B8GTY7 Diguanylate cyclase/phosphodiesterase with PAS/P... 181 7e-44 UniRef50_Q15QF9 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ps... 181 1e-43 UniRef50_B4VZB0 Cyclic diguanylate phosphodiesterase (EAL) domai... 179 3e-43 UniRef50_UPI0001C31434 diguanylate cyclase/phosphodiesterase wit... 179 4e-43 UniRef50_Q67NQ9 Putative uncharacterized protein n=1 Tax=Symbiob... 179 4e-43 UniRef50_B8GT56 Diguanylate cyclase/phosphodiesterase with PAS/P... 179 5e-43 UniRef50_Q3J9L4 Diguanylate cyclase/phosphodiesterase with PAS/P... 179 5e-43 UniRef50_A6V917 Membrane protein, putative n=6 Tax=Pseudomonas a... 177 1e-42 UniRef50_B8GQU5 Diguanylate cyclase/phosphodiesterase with PAS/P... 176 3e-42 UniRef50_Q15NX4 Diguanylate cyclase/phosphodiesterase with PAS/P... 176 4e-42 UniRef50_Q8D5T3 FOG: EAL domain protein n=2 Tax=Vibrio vulnificu... 175 7e-42 UniRef50_A6FHQ7 PAS sensor diguanylate cyclase and phophodiester... 174 8e-42 UniRef50_A3ISZ5 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 174 1e-41 UniRef50_A8FQD1 Sensory box protein n=15 Tax=Shewanella RepID=A8... 173 2e-41 UniRef50_B9ZQM9 Diguanylate cyclase/phosphodiesterase with PAS/P... 173 3e-41 UniRef50_C5BR51 PAS sensor diguanylate cyclase and phophodiester... 172 4e-41 UniRef50_C0N6D2 Putative uncharacterized protein n=1 Tax=Methylo... 172 4e-41 UniRef50_Q0KDS7 Predicted signal transduction protein containing... 172 4e-41 UniRef50_Q88M14 Sensory box protein/GGDEF family protein n=23 Ta... 172 6e-41 UniRef50_C0N942 Cyclic diguanylate phosphodiesterase domain prot... 171 8e-41 UniRef50_B0C721 EAL domain protein n=5 Tax=Acaryochloris marina ... 171 1e-40 UniRef50_B5JU45 PAS sensor diguanylate cyclase and phophodiester... 171 1e-40 UniRef50_B9YZ47 Diguanylate cyclase/phosphodiesterase with PAS/P... 170 2e-40 UniRef50_B8GSV3 Signal transduction protein containing a membran... 169 3e-40 UniRef50_C8VWV7 Diguanylate cyclase/phosphodiesterase with PAS/P... 169 3e-40 UniRef50_D0IWU4 Diguanylate cyclase/phosphodiesterase with n=3 T... 169 3e-40 UniRef50_B4RSB4 PAS sensor diguanylate cyclase and phophodiester... 169 4e-40 UniRef50_Q15NS8 Diguanylate cyclase/phosphodiesterase with PAS/P... 168 8e-40 UniRef50_B8HP72 Diguanylate cyclase/phosphodiesterase with extra... 167 1e-39 UniRef50_A1SX34 Diguanylate cyclase/phosphodiesterase with PAS/P... 167 1e-39 UniRef50_Q1YVI9 Putative uncharacterized protein n=1 Tax=gamma p... 167 1e-39 UniRef50_A9KMR9 Diguanylate cyclase/phosphodiesterase with PAS/P... 167 1e-39 UniRef50_B4SPP4 Diguanylate cyclase/phosphodiesterase with PAS/P... 167 1e-39 UniRef50_Q3JW35 EAL/GGDEF domain protein n=50 Tax=pseudomallei g... 167 2e-39 UniRef50_Q30WY0 Diguanylate cyclase/phosphodiesterase n=1 Tax=De... 167 2e-39 UniRef50_B4S311 Predicted signal transduction protein containing... 166 3e-39 UniRef50_C5BTR2 PAS sensor diguanylate cyclase/phophodiesterase ... 166 5e-39 UniRef50_A4BRP5 Putative uncharacterized protein n=2 Tax=Gammapr... 165 6e-39 UniRef50_C8W213 Diguanylate cyclase/phosphodiesterase with PAS/P... 165 7e-39 UniRef50_C0N8Q5 Cyclic diguanylate phosphodiesterase domain prot... 165 7e-39 UniRef50_A6AP12 FOG: EAL domain protein n=2 Tax=Vibrio harveyi R... 165 8e-39 UniRef50_C7RRQ6 Response regulator receiver modulated diguanylat... 164 1e-38 UniRef50_Q12JD4 Diguanylate cyclase/phosphodiesterase n=2 Tax=Sh... 164 1e-38 UniRef50_B8GPR3 Signal transduction protein n=2 Tax=Thioalkalivi... 164 1e-38 UniRef50_C7RCU7 Diguanylate cyclase/phosphodiesterase with Chase... 164 1e-38 UniRef50_C8T3N0 Putative uncharacterized protein n=1 Tax=Klebsie... 164 2e-38 UniRef50_B4AXX8 Diguanylate cyclase/phosphodiesterase with PAS/P... 164 2e-38 UniRef50_Q67KG5 Putative uncharacterized protein n=1 Tax=Symbiob... 163 2e-38 UniRef50_B0C150 Signal transduction protein containing an EAL do... 163 3e-38 UniRef50_B2JVY6 Diguanylate cyclase/phosphodiesterase with PAS/P... 163 3e-38 UniRef50_Q2SN89 Predicted signal transduction protein containing... 162 3e-38 UniRef50_C5V3L4 Diguanylate cyclase/phosphodiesterase with PAS/P... 162 4e-38 UniRef50_Q2SAB8 Predicted signal transduction protein containing... 162 4e-38 UniRef50_A9L3T6 Diguanylate cyclase/phosphodiesterase n=12 Tax=S... 162 5e-38 UniRef50_UPI0001AEBED2 PAS sensor diguanylate cyclase and phopho... 162 6e-38 UniRef50_A3QHP3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Sh... 161 7e-38 UniRef50_C6NZZ7 Diguanylate cyclase/phosphodiesterase with PAS/P... 161 7e-38 UniRef50_Q7MQJ2 GGDEF family protein n=2 Tax=Vibrio vulnificus R... 161 8e-38 UniRef50_A8GZL9 Diguanylate cyclase/phosphodiesterase with PAS/P... 161 1e-37 UniRef50_A4XVP2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ps... 160 2e-37 UniRef50_D0L072 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ha... 160 2e-37 UniRef50_A3JH20 PAS sensor diguanylate cyclase and phophodiester... 160 2e-37 UniRef50_A6W0Q6 Response regulator receiver modulated diguanylat... 160 2e-37 UniRef50_Q6LLM3 Hipothetical sensory box/GGDEF family protein n=... 159 3e-37 UniRef50_Q31DY5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 159 4e-37 UniRef50_C6XCG6 Diguanylate cyclase/phosphodiesterase with PAS/P... 158 7e-37 UniRef50_A4G5U9 Putative uncharacterized protein n=1 Tax=Hermini... 158 7e-37 UniRef50_B5JW24 PAS sensor diguanylate cyclase and phophodiester... 158 8e-37 UniRef50_C0N6V7 Cyclic diguanylate phosphodiesterase domain prot... 158 8e-37 UniRef50_Q47K14 Diguanylate cyclase/phosphodiesterase n=1 Tax=De... 158 8e-37 UniRef50_B8HUG4 Diguanylate cyclase/phosphodiesterase with PAS/P... 157 1e-36 UniRef50_A6EX87 Predicted signal transduction protein containing... 157 2e-36 UniRef50_Q67RI1 Putative uncharacterized protein n=1 Tax=Symbiob... 157 2e-36 UniRef50_C5AKX9 Diguanylate cyclase/phosphodiesterase n=1 Tax=Bu... 157 2e-36 UniRef50_Q3SIB5 Putative diguanylate cyclase/phosphodiesterase (... 157 2e-36 UniRef50_Q1PVH4 Conserved hypothetical response regulator protei... 157 2e-36 UniRef50_C0QD16 Putative uncharacterized protein n=1 Tax=Desulfo... 155 5e-36 UniRef50_B9L207 Developmental regulator MorA n=1 Tax=Thermomicro... 155 6e-36 UniRef50_C8R1Y2 Response regulator receiver modulated diguanylat... 155 6e-36 UniRef50_C6P6Y2 Diguanylate cyclase/phosphodiesterase with PAS/P... 155 7e-36 UniRef50_A1S2J3 Diguanylate cyclase/phosphodiesterase with PAS/P... 155 7e-36 UniRef50_P74400 Sll0267 protein n=3 Tax=Bacteria RepID=P74400_SYNY3 154 1e-35 UniRef50_C9P6X4 Diguanylate cyclase/phosphodiesterase with PAS/P... 154 1e-35 UniRef50_Q1YXX2 Putative signal transduction protein n=2 Tax=Pho... 154 1e-35 UniRef50_Q1R0D8 Diguanylate cyclase/phosphodiesterase with PAS/P... 154 1e-35 UniRef50_A4CBR3 Predicted signal transduction protein containing... 154 1e-35 UniRef50_C9R8T9 Diguanylate cyclase/phosphodiesterase with GAF s... 154 1e-35 UniRef50_C6MI98 Diguanylate cyclase/phosphodiesterase with PAS/P... 154 2e-35 UniRef50_Q0AG61 Diguanylate cyclase/phosphodiesterase with PAS/P... 153 3e-35 UniRef50_C0QQ30 Signal transduction response regulator n=1 Tax=P... 152 3e-35 UniRef50_C8VVE0 Diguanylate cyclase/phosphodiesterase with PAS/P... 152 4e-35 UniRef50_Q1NMJ1 GGDEF:EAL n=3 Tax=Deltaproteobacteria RepID=Q1NM... 152 5e-35 UniRef50_Q1K3N9 Diguanylate cyclase/phosphodiesterase with PAS/P... 152 6e-35 UniRef50_A4A3V9 Sensory box/GGDEF/EAL domain protein n=2 Tax=unc... 152 7e-35 UniRef50_B9YY70 Diguanylate cyclase/phosphodiesterase with PAS/P... 151 7e-35 UniRef50_B1Y3Y1 Diguanylate cyclase/phosphodiesterase n=1 Tax=Le... 151 8e-35 UniRef50_Q3ILC0 Putative orphan protein ; putative sensory-box d... 151 9e-35 UniRef50_C9R830 Diguanylate cyclase/phosphodiesterase n=1 Tax=Am... 151 1e-34 UniRef50_Q1Q2M0 Putative uncharacterized protein n=2 Tax=Bacteri... 151 1e-34 UniRef50_Q9I310 Uncharacterized signaling protein PA1727 n=74 Ta... 150 2e-34 UniRef50_C4I4I7 Sensory box/ggdef/eal domain protein n=36 Tax=Bu... 150 2e-34 UniRef50_Q1N0U8 Putative diguanylate cyclase/phosphodiesterase (... 150 2e-34 UniRef50_C6P1A0 Diguanylate cyclase/phosphodiesterase with PAS/P... 150 2e-34 UniRef50_A8UVA1 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 150 2e-34 UniRef50_C6XBN5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Me... 150 2e-34 UniRef50_C6WWW7 Diguanylate cyclase/phosphodiesterase with PAS/P... 149 3e-34 UniRef50_B1WR61 Putative uncharacterized protein n=1 Tax=Cyanoth... 149 4e-34 UniRef50_B3PCW8 Sensory box/GGDEF domain/EAL domain protein n=1 ... 149 4e-34 UniRef50_B0TEB0 Pas sensor diguanylate cyclase/phophodiesterase ... 149 6e-34 UniRef50_Q0G4W7 Diguanylate cyclase/phosphodiesterase n=1 Tax=Fu... 148 7e-34 UniRef50_B0TL03 Diguanylate cyclase/phosphodiesterase n=1 Tax=Sh... 148 7e-34 UniRef50_Q73RG0 HAMP domain/GGDEF domain/EAL domain protein n=1 ... 148 9e-34 UniRef50_C9Y9D8 Putative uncharacterized protein n=1 Tax=Curviba... 148 9e-34 UniRef50_B8GU61 Signal transduction protein containing a membran... 147 1e-33 UniRef50_Q3J907 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ni... 147 1e-33 UniRef50_D1B415 Diguanylate cyclase n=1 Tax=Sulfurospirillum del... 147 1e-33 UniRef50_D0I367 Sensory box/GGDEF family protein n=1 Tax=Grimont... 147 1e-33 UniRef50_A6Q1F1 Signal transduction response regulator n=2 Tax=B... 147 1e-33 UniRef50_A6T0F0 Sensory box/GGDEF family protein n=2 Tax=Oxaloba... 147 1e-33 UniRef50_Q2B961 Putative uncharacterized protein n=1 Tax=Bacillu... 147 1e-33 UniRef50_C7LR02 Diguanylate cyclase/phosphodiesterase with PAS/P... 147 1e-33 UniRef50_D1AZY7 Diguanylate cyclase n=1 Tax=Sulfurospirillum del... 147 2e-33 UniRef50_A1K3A1 GGEF/EAL/PAS/PAC-domain containing protein n=1 T... 147 2e-33 UniRef50_D1B111 PAS sensor protein n=1 Tax=Sulfurospirillum dele... 147 2e-33 UniRef50_Q3IEZ9 Putative uncharacterized protein n=2 Tax=Pseudoa... 147 2e-33 UniRef50_Q474K3 Diguanylate cyclase/phosphodiesterase with PAS/P... 146 3e-33 UniRef50_A9BVF0 Diguanylate cyclase/phosphodiesterase n=2 Tax=ce... 146 3e-33 UniRef50_C6P1Q1 Diguanylate cyclase/phosphodiesterase with PAS/P... 146 3e-33 UniRef50_A6GRS4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Li... 146 4e-33 UniRef50_Q3A6T5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pe... 146 4e-33 UniRef50_Q5P4W8 Putative uncharacterized protein n=2 Tax=Proteob... 145 4e-33 UniRef50_B1HWB0 Signaling protein n=2 Tax=Bacillaceae RepID=B1HW... 145 6e-33 UniRef50_B4B5G1 Diguanylate cyclase/phosphodiesterase with PAS/P... 145 6e-33 UniRef50_A9GW14 Sensory box/GGDEF family protein n=1 Tax=Sorangi... 145 7e-33 UniRef50_D2LS52 Diguanylate cyclase/phosphodiesterase with PAS/P... 145 7e-33 UniRef50_A3IWQ8 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 145 8e-33 UniRef50_Q2P5I3 Putative uncharacterized protein XOO1439 n=9 Tax... 145 8e-33 UniRef50_B1M823 Diguanylate cyclase/phosphodiesterase n=1 Tax=Me... 145 8e-33 UniRef50_A1KAZ1 Hypothetical signaling protein n=1 Tax=Azoarcus ... 145 8e-33 UniRef50_UPI0001C31379 diguanylate cyclase/phosphodiesterase wit... 145 8e-33 UniRef50_C6MD86 Diguanylate cyclase/phosphodiesterase with PAS/P... 144 9e-33 UniRef50_B6BNW2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ca... 144 9e-33 UniRef50_B4U7Y9 Diguanylate cyclase/phosphodiesterase n=1 Tax=Hy... 144 1e-32 UniRef50_C7RNJ0 Diguanylate cyclase/phosphodiesterase with PAS/P... 144 1e-32 UniRef50_C5BTG9 PAS/GGDEF/EAL domain protein n=2 Tax=Gammaproteo... 144 1e-32 UniRef50_A1SWA5 Diguanylate cyclase/phosphodiesterase with PAS/P... 144 1e-32 UniRef50_C6C4P4 Diguanylate cyclase/phosphodiesterase with MHYT ... 144 1e-32 UniRef50_Q1AYR2 Diguanylate cyclase/phosphodiesterase with PAS/P... 144 2e-32 UniRef50_B3EBJ5 Diguanylate cyclase/phosphodiesterase with PAS/P... 144 2e-32 UniRef50_Q2BMA7 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesari... 144 2e-32 UniRef50_C1DBY5 Diguanylate cyclase/phosphodiesterase with PAS/P... 143 2e-32 UniRef50_Q3SME1 Putative diguanylate cyclase/phosphodiesterase (... 143 2e-32 UniRef50_Q7NZ89 Putative uncharacterized protein n=1 Tax=Chromob... 143 2e-32 UniRef50_Q1PXY5 Putative uncharacterized protein n=1 Tax=Candida... 143 3e-32 UniRef50_Q7P0M4 Putative uncharacterized protein n=1 Tax=Chromob... 143 3e-32 UniRef50_Q0A9M6 Diguanylate cyclase/phosphodiesterase with PAS/P... 143 3e-32 UniRef50_A8EV29 EAL/GGDEF domain protein n=2 Tax=Campylobacteral... 142 3e-32 UniRef50_B7RX37 Putative uncharacterized protein n=1 Tax=marine ... 142 3e-32 UniRef50_Q0AGS8 Diguanylate phosphodiesterase n=2 Tax=Nitrosomon... 142 3e-32 UniRef50_Q1QZB7 Diguanylate cyclase/phosphodiesterase with PAS/P... 142 3e-32 UniRef50_Q2SCC3 Predicted signal transduction protein containing... 142 3e-32 UniRef50_C6BPU5 Diguanylate cyclase/phosphodiesterase with MHYT ... 142 4e-32 UniRef50_B8H3I6 Sensory box/GGDEF family protein n=4 Tax=Cauloba... 142 4e-32 UniRef50_D0J3T4 Diguanylate cyclase/phosphodiesterase n=3 Tax=Bu... 142 6e-32 UniRef50_B9M1S6 Diguanylate cyclase/phosphodiesterase with PAS/P... 142 7e-32 UniRef50_A4G4I8 Putative uncharacterized protein n=2 Tax=Hermini... 142 7e-32 UniRef50_Q7MAP6 GGDEF FAMILY PROTEIN n=1 Tax=Wolinella succinoge... 141 8e-32 UniRef50_C7RS22 Diguanylate cyclase/phosphodiesterase with PAS/P... 141 8e-32 UniRef50_Q47WU6 GGDEF/EAL domain protein n=1 Tax=Colwellia psych... 141 8e-32 UniRef50_Q607T2 Sensory box protein/GGDEF domain protein n=2 Tax... 141 8e-32 UniRef50_C0QU11 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pe... 141 8e-32 UniRef50_Q5QUC0 Signaling protein with a MHYT sensor domain, PAS... 141 1e-31 UniRef50_Q21KC5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Sa... 141 1e-31 UniRef50_B8GN37 Diguanylate cyclase/phosphodiesterase with PAS/P... 140 1e-31 UniRef50_B0S9W4 Response regulator of a two component complex n=... 140 1e-31 UniRef50_Q7MQD8 Sensory box/GGDEF family protein n=54 Tax=Vibrio... 140 1e-31 UniRef50_A1W268 Diguanylate cyclase/phosphodiesterase with PAS/P... 140 1e-31 UniRef50_A4ABI7 Sensory box/GGDEF family protein n=3 Tax=unclass... 140 1e-31 UniRef50_A4XP68 Diguanylate cyclase/phosphodiesterase with PAS/P... 140 2e-31 UniRef50_Q31GA6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 140 2e-31 UniRef50_B5JWR5 Sensory box/ggdef domain/eal domain protein n=1 ... 140 2e-31 UniRef50_C7R6X9 Diguanylate cyclase/phosphodiesterase with PAS/P... 140 2e-31 UniRef50_Q1NJA1 PAS:GGDEF:EAL n=7 Tax=delta proteobacterium MLMS... 140 2e-31 UniRef50_C8QYF1 Diguanylate cyclase/phosphodiesterase n=1 Tax=De... 140 2e-31 UniRef50_B8G9I9 Diguanylate cyclase/phosphodiesterase with PAS/P... 140 2e-31 UniRef50_B4RUS1 Putative diguanylate cyclase/phosphodiesterase d... 140 3e-31 UniRef50_Q12MP7 GGDEF domain n=1 Tax=Shewanella denitrificans OS... 139 3e-31 UniRef50_A8ET73 EAL/GGDEF/PAS domain protein n=1 Tax=Arcobacter ... 139 3e-31 UniRef50_C6D8Q9 Diguanylate cyclase/phosphodiesterase with PAS/P... 139 3e-31 UniRef50_A3YI96 Sensory box/GGDEF family protein n=1 Tax=Marinom... 139 4e-31 UniRef50_Q0A5U6 Periplasmic sensor diguanylate cyclase/phosphodi... 139 4e-31 UniRef50_A4Y0E0 Diguanylate cyclase/phosphodiesterase with PAS/P... 139 4e-31 UniRef50_B9LZ98 Diguanylate cyclase/phosphodiesterase with PAS/P... 139 4e-31 UniRef50_C6WTL1 Diguanylate cyclase/phosphodiesterase with PAS/P... 139 5e-31 UniRef50_B9Z1R5 Diguanylate cyclase/phosphodiesterase with PAS/P... 139 5e-31 UniRef50_Q39X25 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ge... 139 5e-31 UniRef50_A8GYS2 Diguanylate cyclase/phosphodiesterase with PAS/P... 139 5e-31 UniRef50_B6BNH0 Sensory box/ggdef domain/eal domain protein n=1 ... 139 5e-31 UniRef50_C5D2S1 Diguanylate cyclase/phosphodiesterase with PAS/P... 139 5e-31 UniRef50_D0J677 Diguanylate cyclase/phosphodiesterase n=2 Tax=Co... 139 5e-31 UniRef50_D0SCY0 Putative uncharacterized protein n=2 Tax=Acineto... 138 7e-31 UniRef50_B9L6I3 Diguanylate cyclase/phosphodiesterase n=2 Tax=Na... 138 7e-31 UniRef50_A1T0Y1 Response regulator receiver modulated diguanylat... 138 7e-31 UniRef50_A7K0U5 Sensory box/GGDEF family protein n=14 Tax=Vibrio... 138 7e-31 UniRef50_C9Y8E7 Putative uncharacterized protein n=1 Tax=Curviba... 138 8e-31 UniRef50_B8GN35 Diguanylate cyclase/phosphodiesterase with GAF s... 138 8e-31 UniRef50_A1U6N9 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ma... 138 8e-31 UniRef50_B7GID3 Multidomain signal transduction protein (Contain... 138 8e-31 UniRef50_C6P6X8 Diguanylate cyclase/phosphodiesterase with PAS/P... 138 9e-31 UniRef50_A0KIX5 PAS:GGDEF domain protein n=1 Tax=Aeromonas hydro... 137 1e-30 UniRef50_A6VUG3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ma... 137 1e-30 UniRef50_Q31HK1 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 137 1e-30 UniRef50_Q2SN60 Predicted signal transduction protein containing... 137 1e-30 UniRef50_C5T9Y9 Diguanylate cyclase/phosphodiesterase with extra... 137 1e-30 UniRef50_A4W933 Diguanylate cyclase/phosphodiesterase n=3 Tax=En... 137 1e-30 UniRef50_B8HWB1 Diguanylate cyclase/phosphodiesterase with FHA a... 137 1e-30 UniRef50_B6EQU6 Putative membrane associated signaling protein n... 137 1e-30 UniRef50_Q478F7 Diguanylate cyclase/phosphodiesterase with PAS/P... 137 1e-30 UniRef50_C7RL13 Diguanylate cyclase/phosphodiesterase with extra... 137 1e-30 UniRef50_A0YXI3 PAS:GGDEF protein n=1 Tax=Lyngbya sp. PCC 8106 R... 137 2e-30 UniRef50_B1Y791 Diguanylate cyclase/phosphodiesterase with PAS/P... 137 2e-30 UniRef50_Q2RQN5 Diguanylate cyclase/phosphodiesterase with PAS/P... 137 2e-30 UniRef50_A4C9D0 Putative Sensory box protein n=2 Tax=Proteobacte... 137 2e-30 UniRef50_C8XJV3 Diguanylate cyclase/phosphodiesterase with GAF s... 137 2e-30 UniRef50_B3PHR1 Hipothetical sensory box/GGDEF family protein n=... 137 2e-30 >UniRef50_P77172 Inner membrane protein yfgF n=114 Tax=Enterobacteriaceae RepID=YFGF_ECOLI Length = 747 Score = 1539 bits (3984), Expect = 0.0, Method: Compositional matrix adjust. Identities = 747/747 (100%), Positives = 747/747 (100%) Query: 1 MKLNATYIKIRDKWWGLPLFLPSLILPIFAHINTFAHISSGEVFLFYLPLALMISMMMFF 60 MKLNATYIKIRDKWWGLPLFLPSLILPIFAHINTFAHISSGEVFLFYLPLALMISMMMFF Sbjct: 1 MKLNATYIKIRDKWWGLPLFLPSLILPIFAHINTFAHISSGEVFLFYLPLALMISMMMFF 60 Query: 61 SWAALPGIALGIFVRKYAELGFYETLSLTANFIIIIILCWGGYRVFTPRRNNVSHGDTRL 120 SWAALPGIALGIFVRKYAELGFYETLSLTANFIIIIILCWGGYRVFTPRRNNVSHGDTRL Sbjct: 61 SWAALPGIALGIFVRKYAELGFYETLSLTANFIIIIILCWGGYRVFTPRRNNVSHGDTRL 120 Query: 121 ISQRIFWQIVFPATLFLILFQFAAFVGLLASRENLVGVMPFNLGTLINYQALLVGNLIGV 180 ISQRIFWQIVFPATLFLILFQFAAFVGLLASRENLVGVMPFNLGTLINYQALLVGNLIGV Sbjct: 121 ISQRIFWQIVFPATLFLILFQFAAFVGLLASRENLVGVMPFNLGTLINYQALLVGNLIGV 180 Query: 181 PLCYFIIRVVRNPFYLRSYYSQLKQQVDAKVTKKEFALWLLALGALLLLLCMPLNEKSTI 240 PLCYFIIRVVRNPFYLRSYYSQLKQQVDAKVTKKEFALWLLALGALLLLLCMPLNEKSTI Sbjct: 181 PLCYFIIRVVRNPFYLRSYYSQLKQQVDAKVTKKEFALWLLALGALLLLLCMPLNEKSTI 240 Query: 241 FSTNYTLSLLLPLMMWGAMRYGYKLISLLWAVVLMISIHSYQNYIPIYPGYTTQLTITSS 300 FSTNYTLSLLLPLMMWGAMRYGYKLISLLWAVVLMISIHSYQNYIPIYPGYTTQLTITSS Sbjct: 241 FSTNYTLSLLLPLMMWGAMRYGYKLISLLWAVVLMISIHSYQNYIPIYPGYTTQLTITSS 300 Query: 301 SYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRDAPWSALCYLR 360 SYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRDAPWSALCYLR Sbjct: 301 SYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRDAPWSALCYLR 360 Query: 361 IPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITA 420 IPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITA Sbjct: 361 IPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITA 420 Query: 421 LDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQR 480 LDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQR Sbjct: 421 LDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQR 480 Query: 481 RGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDVYHEILLRMKGENDELIS 540 RGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDVYHEILLRMKGENDELIS Sbjct: 481 RGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDVYHEILLRMKGENDELIS 540 Query: 541 PDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVS 600 PDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVS Sbjct: 541 PDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVS 600 Query: 601 QLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKN 660 QLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKN Sbjct: 601 QLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKN 660 Query: 661 VNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGID 720 VNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGID Sbjct: 661 VNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGID 720 Query: 721 YMQGYLIGKPQPLIDTLNEIEPIRESA 747 YMQGYLIGKPQPLIDTLNEIEPIRESA Sbjct: 721 YMQGYLIGKPQPLIDTLNEIEPIRESA 747 >UniRef50_A8GHP9 Diguanylate cyclase/phosphodiesterase n=1 Tax=Serratia proteamaculans 568 RepID=A8GHP9_SERP5 Length = 750 Score = 611 bits (1576), Expect = e-173, Method: Compositional matrix adjust. Identities = 321/737 (43%), Positives = 485/737 (65%), Gaps = 20/737 (2%) Query: 10 IRDKWWGLPLFLPSLILPIFAHINTFAHISSGEVFLFYLPLALMISMMMFFSWAALPGIA 69 +R++WWG PL L++P ++ + G+V+L YLPLA I+++M + W ALPGI Sbjct: 21 LRERWWGYPLIWGLLLIPFAGWLSPRIMLPEGKVYLLYLPLAACIALLMVYDWRALPGIT 80 Query: 70 LGIFVRKYAELGFYETLSLTANFIIIIILCWGGYRVFTPRRNNVSHGDTRLISQRIFWQI 129 L I VR + LG + +T+ +++ +ILCW GYR T RR + G L+ R+ W + Sbjct: 81 LAIMVRYASRLGLESGILVTSLYLLCLILCWLGYRSQTQRRWCAAPGVPTLVKARLIWLV 140 Query: 130 VFPATLFLILFQFAAFVGLLASRENLVGVMPFN---LGTLINYQALLVGNLIGVPLCYFI 186 V PA LF+ F V L A + +G+MP N L L+N+QALL+G L +PL YF+ Sbjct: 141 VLPALLFV--FGLKLLVAL-AQLPDELGMMPGNSDYLLALVNFQALLLGCLSAMPLFYFM 197 Query: 187 IRVVRNPFYLRSYYSQLKQQVDAKVTKKEFALWLLALGALLLLLCMPLNEKSTIFSTNYT 246 +R++ P + + + + +++ + KKE +LWLL L +++ LL + + Y Sbjct: 198 LRLLNKPRFALTLWRRFGREMAPQADKKELSLWLLVLVSMVALLSYYAKNSNPLLLGGYG 257 Query: 247 LSLLLPLMMWGAMRYGYKLISLLWAVVLMISIHSYQNYIPIYPGYTTQ------LTITSS 300 L LLLP+M++GAMR+GY+ ++W+ L++ Y PGY + L + SS Sbjct: 258 LILLLPVMLYGAMRFGYQFNCIIWSSSLLVLFFHY-------PGYAQRDNLLHNLAVISS 310 Query: 301 SYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRDAPWSALCYLR 360 +VF+ + M+ L TRQR R Q A DPV+ LPN+RAL R L + S LC+LR Sbjct: 311 MMVVFTLCIYLMSALNTRQRLSHARAQSAALQDPVIGLPNLRALKRDLTLSLPSTLCFLR 370 Query: 361 IPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITA 420 + +++L +NYG+ LRI++KQ+L+ L +L PGE VY L G DL LR++ E +E++ Sbjct: 371 VSELDLLSRNYGMQLRIRFKQQLAALLHQVLAPGEGVYHLPGYDLLLRVDGEDSEEKVLQ 430 Query: 421 LDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQR 480 + L++FR W+G+P+ P +G+ YC V + H+YLLLGEL+++AE+S+ + PE++Q Sbjct: 431 IYHALEKFRLIWNGLPLHPPLGLGYCSVNADFEHLYLLLGELSSLAEVSLTSGKPESVQN 490 Query: 481 RGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDVYHEILLRMKGENDELIS 540 G ++Q E+K KV +++ +Q AL+++ F LMAQPI G+RGD YHEILLRM+ E+IS Sbjct: 491 -GGQWVQEEIKRKVELLHGVQHALDNDGFILMAQPIVGLRGDRYHEILLRMRDTCGEIIS 549 Query: 541 PDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVS 600 P+ FLPVAHEFGL+ +D+WV+ +TL+FM RA++P+ RFA+NLSP+S+C+ +V+ Sbjct: 550 PNDFLPVAHEFGLAYRLDLWVLRNTLKFMDLYRAELPSARFAVNLSPSSLCRPMLRHDVN 609 Query: 601 QLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKN 660 LL +YQIE +QL EVTES+ L + A LQ L+E+GC+IA+DDFGTGYASY RLK Sbjct: 610 SLLEQYQIEPYQLTLEVTESHLLQDTAYAGANLQALREIGCRIALDDFGTGYASYDRLKM 669 Query: 661 VNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGID 720 + D+LKIDGSF+R++++N +D+Q++ SIC +ARMK++ +VAEYVE+ E A+ +G+D Sbjct: 670 LPVDMLKIDGSFVRDMLTNPVDFQVITSICKVARMKRLAIVAEYVESMEQLVALKGVGVD 729 Query: 721 YMQGYLIGKPQPLIDTL 737 YMQGY IG+PQPL+ L Sbjct: 730 YMQGYFIGEPQPLLALL 746 >UniRef50_B2VE87 Inner membrane protein YfgF n=3 Tax=Erwinia RepID=B2VE87_ERWT9 Length = 749 Score = 561 bits (1445), Expect = e-158, Method: Compositional matrix adjust. Identities = 308/735 (41%), Positives = 470/735 (63%) Query: 1 MKLNATYIKIRDKWWGLPLFLPSLILPIFAHINTFAHISSGEVFLFYLPLALMISMMMFF 60 MK K +WWGLPL L ++LP+ + ++ IS G V+L YLP+A+MI+M+M F Sbjct: 1 MKKTRMLEKFTARWWGLPLLLALVMLPVASALSVRLWISDGYVYLIYLPIAMMIAMLMVF 60 Query: 61 SWAALPGIALGIFVRKYAELGFYETLSLTANFIIIIILCWGGYRVFTPRRNNVSHGDTRL 120 W A PGIA+ + + L L F+ + W GYR R +VS G+ Sbjct: 61 DWRAFPGIAVALCFHYLGRYTVPQVLVLVGMFLASLAAGWWGYRTQIKTRWSVSPGELSQ 120 Query: 121 ISQRIFWQIVFPATLFLILFQFAAFVGLLASRENLVGVMPFNLGTLINYQALLVGNLIGV 180 +S R+ W ++ +TLF+IL Q +G+L ++ F+L L+NYQ+LL+ +L V Sbjct: 121 VSIRLIWLVLVISTLFVILTQLVLPIGILPLHYSVFVDDSFSLRALLNYQSLLLASLGTV 180 Query: 181 PLCYFIIRVVRNPFYLRSYYSQLKQQVDAKVTKKEFALWLLALGALLLLLCMPLNEKSTI 240 PL YF +R++RNP ++ ++ ++Q+ A VT +EF LWL+ L +LL++L + + + Sbjct: 181 PLFYFSLRLLRNPRFIIMLKNRCQRQISAGVTWREFLLWLVLLMSLLIMLTLFRANQDNL 240 Query: 241 FSTNYTLSLLLPLMMWGAMRYGYKLISLLWAVVLMISIHSYQNYIPIYPGYTTQLTITSS 300 +T Y L LLLPLM+W A+R+GY SL W ++L++ ++ + L + S+ Sbjct: 241 LTTEYGLPLLLPLMLWAALRFGYLFTSLSWGILLVVLYQLRDRFMDLTVMKPYNLLVISA 300 Query: 301 SYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRDAPWSALCYLR 360 LVF+ ++ M+ ++TRQR ++ R + LA DP++ LPN+RALN+ L S+LC+LR Sbjct: 301 YLLVFTLVILLMSAISTRQRQLLTRAKELALTDPIIGLPNLRALNKDLAFVSCSSLCFLR 360 Query: 361 IPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITA 420 IP ++ L + YG+ LRIQYK+ L+ +L P L GE +YQL G DL +RLN Q RI Sbjct: 361 IPDLDRLSRTYGLRLRIQYKRSLAIYLRPNLFAGESIYQLPGFDLVIRLNHAVLQSRIEE 420 Query: 421 LDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQR 480 L++ +K + WDG+P+ P IG+SYC V +PV H+Y LLGE++ +AE S+ + N+Q+ Sbjct: 421 LEARIKSYHLSWDGLPIHPDIGLSYCTVNTPVLHLYELLGEMSALAETSLRSGHAVNLQQ 480 Query: 481 RGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDVYHEILLRMKGENDELIS 540 + +QR + +K+AM++ +Q AL++ F LM+Q I G+RGD Y+EILLRM E I Sbjct: 481 STNVTVQRHITEKLAMLHDIQFALQNGSFQLMSQKICGVRGDDYYEILLRMVNTQGEYIQ 540 Query: 541 PDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVS 600 P SF+PV EFGL+ +D V+E L+F+ +R ++P RFAINL ++C+ + E++ Sbjct: 541 PASFIPVVQEFGLTWEVDRMVLEQALRFIHRHRDRLPGIRFAINLFAATLCRPQLTEEIA 600 Query: 601 QLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKN 660 L + +E WQLI EV ES L++ +L L++LGC++AIDDFGTGYASY+RLK Sbjct: 601 SSLKTHGVEPWQLIIEVKESPMLSDNSWGNRSLAQLRKLGCRVAIDDFGTGYASYSRLKR 660 Query: 661 VNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGID 720 D+LKIDGSF+RN+++NSLDYQI+ SIC ++R+K+M +VAE+V+ EE+ E + LG+D Sbjct: 661 AQVDMLKIDGSFVRNMLNNSLDYQIIVSICAVSRLKRMQIVAEFVQTEEVAEELRKLGVD 720 Query: 721 YMQGYLIGKPQPLID 735 Y+QG ++G P PL D Sbjct: 721 YLQGEIVGMPIPLQD 735 >UniRef50_C1MAR9 Diguanylate cyclase/phosphodiesterase n=2 Tax=Citrobacter RepID=C1MAR9_9ENTR Length = 736 Score = 461 bits (1186), Expect = e-128, Method: Compositional matrix adjust. Identities = 268/734 (36%), Positives = 415/734 (56%), Gaps = 15/734 (2%) Query: 3 LNATYIK-IRDKWWGLPLFLPSLILPIFAHINTFAHISSGEVFLFYLPLALMISMMMFFS 61 +N+ IK IR+ W LPL LP L P+ ++N ++ +++ + ++ L LA+ + ++ F Sbjct: 5 INSNTIKNIRE--WCLPLVLPGLFYPLAQYLNGYSILNNTILTVYDLKLAVFSAALVLFG 62 Query: 62 WAALPGIALGIFVRKYAELGFYETLSLTANFIIIIILCWGGYRVFTPRRNNVSHGDTRLI 121 + LPG L F+ +G II L + YR FT RR+ VS G ++ Sbjct: 63 FRVLPGFLL--FLTVMFVVGPQNERVDALCLIIASTLSYAAYRKFTGRRSCVSFGRIKIS 120 Query: 122 SQRIFWQIVFPATLFLILFQ-FAAFVGLLASRENLVGVMPFNLGTLINYQALLVGNLIGV 180 R+ W + L+L+ + FA FV R ++ + +LG L+ Q ++ G L G+ Sbjct: 121 FNRLLWLCGYNVLLYLVFSKLFAMFVAH-GQRPDVDNIPALSLGMLVRIQGIINGCLTGI 179 Query: 181 PLCYFIIRVVRNPFYLRSYYSQLKQQVDAKVTKKEFALWLLALGALLLLLCMPLNEKSTI 240 PL Y I R++R P +L ++ + +Q + W + L L+ L P N + Sbjct: 180 PLFYKIYRIIRRPSFLLTFLRAIAEQCKGNIGVYGVISWCILLFFLMFFLTSPDNLD--V 237 Query: 241 FSTNYTLSLLLPLMMWGAMRYGYKLISLLWAVVLMISIHSYQNYIPIYPGYTTQLTITSS 300 F + Y+L LL PLM+WGA++ G+ L+W +VL+I +YI + + S+ Sbjct: 238 FFSIYSLILLFPLMLWGAIKIGHLFTMLVWTIVLIILGKHNDSYIASDVNFMLHQALVST 297 Query: 301 SYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRDAPWSALCYLR 360 VFS + M VLA R + L DP+ + N+RAL L + +C ++ Sbjct: 298 LIFVFSLTIVIMGVLAKFTRQRFNQALLLGLTDPMTGMANLRALKTELFTTERATVCLIQ 357 Query: 361 IPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITA 420 IP +E+ + YG R +Y++ L+ L L E VY +G DL +RL + ER+ Sbjct: 358 IPELELFSRRYGFHFRARYQKILAEHLRRHLVKSEKVYYHAGYDLLIRLENGT-WERLCD 416 Query: 421 LDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQR 480 L FR F++ + + G+ YC + + IY L+G+L VA LS+ PEN++ Sbjct: 417 LYQAANSFRLFYNNHRLGFRSGLGYCLINDLSDDIYQLVGKLGMVAGLSLTNGRPENLEA 476 Query: 481 RGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDV-YHEILLRMKGENDELI 539 + + L + DK + LQ AL++N F LMAQPI G+ YHEIL+RM E E I Sbjct: 477 QHSRILGNHIVDKTEIRTALQNALDNNAFVLMAQPIVSTHGEAPYHEILIRMLNERGEFI 536 Query: 540 SPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEV 599 P+SFLPVAH+ GL+ ID+WVIE+TL+FM + P H F+INL+P +VC++ +++ Sbjct: 537 PPNSFLPVAHDAGLAPDIDLWVIENTLKFMRNH----PQHCFSINLAPVTVCRSNIVMKI 592 Query: 600 SQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLK 659 +QLL Y +E ++IFE+TE++ L++ +Q TL+ +++LGC++AIDDFGTG+AS+ARL Sbjct: 593 TQLLHDYAVEPQRIIFEITEADTLSDKEQTVETLRLIRQLGCRVAIDDFGTGFASHARLM 652 Query: 660 NVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGI 719 N+ AD+LKIDGSFIR I + + Y IV S C +A MKKM VVAE+VEN I+ + + + Sbjct: 653 NIEADILKIDGSFIRRITESEISYYIVESFCRVAEMKKMQVVAEFVENATIQACLEKMNV 712 Query: 720 DYMQGYLIGKPQPL 733 ++QGY IGKP PL Sbjct: 713 GWLQGYHIGKPTPL 726 >UniRef50_C5BBK9 Cyclic diguanylate phosphodiesterase (EAL) n=2 Tax=Edwardsiella RepID=C5BBK9_EDWI9 Length = 723 Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust. Identities = 239/673 (35%), Positives = 385/673 (57%), Gaps = 12/673 (1%) Query: 77 YAELGFYETLSLTANFIIIIILCWGGYRVFTPRRNNVSHGDTRLISQRIFWQIVFPATLF 136 Y G L++ F + ++LCW GY R L+ R+FW LF Sbjct: 59 YLAYGMTPLLAVGLPFSLTLLLCWWGYTQHAGLRWRAGLTKPHLMLPRLFWLAGMFPLLF 118 Query: 137 LILFQFAAFVGLLASRENLVGVMPFNLGTLINYQALLVGNLIGVPLCYFIIRVVRNPFYL 196 ++L Q +G+ + +PF+L TL NYQ +++G L+G PL Y ++R++R P Y Sbjct: 119 ILLTQIVVTMGMFSGHPFFAERLPFSLSTLTNYQGMVLGALVGAPLYYHLLRLLRRPRYW 178 Query: 197 RSYYSQLKQQVDAKVTKKEFALWLLALGALLLLLCMPLNEKSTIFSTNYTLSLLLPLMMW 256 + S+ +++ T EF LW + ++ LLC+ + +I T+YTL+LLLP+M++ Sbjct: 179 QVMRSRCRREKTGDATGWEFCLWGGVVAVMIALLCIRAQAQGSILFTDYTLALLLPVMIF 238 Query: 257 GAMRYGYKLISLLWAVVLMISIHSYQNYI-PIYPGYTTQLTITSSSYLVFSFIVNYMAVL 315 GAMRYGY L + +W+V +MI + +Y+ Y+ P G + ++ +VF+ V MA + Sbjct: 239 GAMRYGYLLSTQVWSVAVMILLFNYEGYVEPDDLG--RNICFVTAMLIVFTLTVILMAAI 296 Query: 316 ATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRDAPWSALCYLRIPGMEMLVKNYGIML 375 RQR + R ++R A +DPVV LPNV L + L+ S LC++RI ++ L + YG+ L Sbjct: 297 NGRQRRLYRYMRRAAMIDPVVQLPNVGCLEQDLQHYGRSVLCFIRISSLDTLCRTYGMQL 356 Query: 376 RIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLKQFRFFWDGM 435 R+ YKQ+L+ +L E VY L G DL +RL Q+ + L+ FR W+G+ Sbjct: 357 RLSYKQRLAAAFRAVLHADERVYHLPGYDLLIRLEPGRAQQTLRRLEQVAHAFRLQWNGL 416 Query: 436 PMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENM---QRRGAMYLQRELKD 492 P+Q Q+G+SYC V V +Y L+GEL+ +AE S+ + E++ QRR LQ+ + Sbjct: 417 PLQRQLGLSYCSVPGTVEALYSLIGELSAMAEQSLDSGRLESLALNQRR----LQQGIDR 472 Query: 493 KVAMMNRLQQALEHNHFFLMAQPITGMRGDVYHEILLRMKGENDELISPDSFLPVAHEFG 552 K +++ LQ+ALE++ F L AQPI G RG+ Y EILL+M E +SP+SFLPVA EFG Sbjct: 473 KASLLRTLQRALENDRFILSAQPIEGFRGESYQEILLKMVDEQGGYLSPESFLPVAEEFG 532 Query: 553 LSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQ 612 L++++D W++ HTL F+ ++RA++P R AI LS + P + +L +Y+IE WQ Sbjct: 533 LTATLDRWILTHTLAFIGQHRAQLPGIRVAIPLSCAGLSPPTLPALLESVLGQYRIEPWQ 592 Query: 613 LIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSF 672 LI + L + A L L+ GC IA++ +A + ++++AD+L++ + Sbjct: 593 LILTF-RAEQLAALAPAPSALSALRAQGCHIALNGIDFVHAG-GQPESLDADILQMTPAL 650 Query: 673 IRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQP 732 R + ++S + IV ++C +A +++ VVA V+++ R + LG+D +QG L+G P P Sbjct: 651 SRRLGAHSAEQYIVTALCQVAHLRRQTVVARAVDSDAQRARLKQLGVDAIQGRLVGAPVP 710 Query: 733 LIDTLNEIEPIRE 745 L L E +E Sbjct: 711 LSALLTATETAKE 723 >UniRef50_C1M7D0 Putative uncharacterized protein n=1 Tax=Citrobacter sp. 30_2 RepID=C1M7D0_9ENTR Length = 740 Score = 367 bits (942), Expect = e-100, Method: Compositional matrix adjust. Identities = 240/719 (33%), Positives = 384/719 (53%), Gaps = 33/719 (4%) Query: 30 AHINTFAHISSGEVFLFYLPLALMISMMMFFSWAALPGIALGIFVRKYAELGFYETLSLT 89 H++ ++ + + L L L+ ++++ + ALP +A F+ +LT Sbjct: 35 GHLSKQEDVAGITLHFYDLTLPLISALLVLYRQKALPILA-TFFLYALYSYSLSSVFTLT 93 Query: 90 ANFIIIIILCWGGYRVFTPRRNNVSHGDTRLISQRIFWQIVFPATLFLILFQFAAFVGLL 149 A + +I Y T +R VS G ++L +QRI W + A LF+ + + Sbjct: 94 AQLLAALI-SQTLYFFSTGKRGAVSFGRSQLTTQRIVWLVCCNALLFISIDHWFQSNTAS 152 Query: 150 ASRENLVGVMPFNLGTLINYQALLVGNLIGVPLCYFIIRVVRNPFYLRSYYSQLKQQVDA 209 A NL F L TLIN Q L+ L G+P CY ++R V+NP + Y Q+K + + Sbjct: 153 APIANL-----FTLQTLINLQWLMNSCLTGIPFCYLLLRSVQNPAWCILYIRQVKALIKS 207 Query: 210 KVTKKEFALWLLALGALLLLLCMPLNEKSTIFSTNYTLSLLLPLMMWGAMRYGYKLISLL 269 LWL+ L ++ L + + E IF T+Y+L LLP+M+WG + G+ LIS + Sbjct: 208 GPPILYQVLWLVLLLCIMSALIV-IREDILIF-TDYSLLWLLPVMLWGVICIGHALISPV 265 Query: 270 WAVVLMISIHSYQNYIPI--YPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQ 327 W +L++ + +YIP Y Y L I+S+ VFS + VL R +RR++ Sbjct: 266 WVTMLILLGYYINSYIPPANYNNYLHSLVISSTIVFVFSITIVVTGVLVVHNRKYLRRLK 325 Query: 328 RLAYVDPVVHLPNVRALNRALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWL 387 +L +P LPN +AL +R LCY+R + L + +GI R ++ + LS ++ Sbjct: 326 QLFRSEPNTGLPNFQALQMDIRKHATECLCYIRCTELNTLEQTHGIEFRFEFVKALSAYV 385 Query: 388 SPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLKQFRFFWDGMPMQPQIGVSYCY 447 L++ D+Y G+ + LRLN I L L FRF W + G++Y Sbjct: 386 RKLIKGTGDIYYAPGHGIILRLNAVPD---IPDLYKDLNSFRFIWKDYQLGLSCGMAYTT 442 Query: 448 VRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHN 507 ++ + ++ + LNT + +S++ P + + ++ + + + LQ+A++ Sbjct: 443 EKNLIKNLSQAIKHLNTQSYISLMQGQPLLLSPQVP---GDKIVSQAVIRHMLQKAIDRK 499 Query: 508 HFFLMAQPI-------------TGMRGDVYHEILLRMKGENDELISPDSFLPVAHEFGLS 554 F LMAQPI TG+ YHEIL+R+K + +LI PD+ LPVA E GL Sbjct: 500 SFELMAQPIVSTMLVVQPIVSTTGLTR--YHEILIRIKMVDGKLIFPDTILPVAREAGLL 557 Query: 555 SSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLI 614 ++D+ VIE T +F+ + P F+INL+P S+ + F V L KY I ++I Sbjct: 558 PALDITVIEQTFRFIQSRQKSDPNSHFSINLTPDSLNKIDFLDNVFTLFRKYSIAPERII 617 Query: 615 FEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIR 674 FEV ES+ + N + L+ L++ G +IAIDDFGTG +SY+RL+ ++AD+LKIDGSFIR Sbjct: 618 FEVIESDIIDNANVTDV-LRALRKAGSKIAIDDFGTGASSYSRLRTLDADILKIDGSFIR 676 Query: 675 NIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPL 733 NI+++ V S C +A++K M VVAE+VENEEI + ++++GI ++QGY IGKP P+ Sbjct: 677 NILTDEFSRCAVRSFCEVAKLKNMEVVAEFVENEEIEKMLITMGIGWLQGYHIGKPVPI 735 >UniRef50_P23842 Uncharacterized protein yfeA n=98 Tax=Enterobacteriaceae RepID=YFEA_ECOLI Length = 729 Score = 316 bits (809), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 216/716 (30%), Positives = 371/716 (51%), Gaps = 29/716 (4%) Query: 32 INTFAHISSGEVFLFYLPLALMISMMMFFSWAALPGIALGIFVRKY--AELGFYETLSL- 88 I+ A I S +FL ++PL +M+S++ F W + + G+F L F +T + Sbjct: 31 ISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVML 90 Query: 89 -TANFIIIIILCWGGYRVFTPRRNNVSHGDTRLISQRIFW-QIVFPATLFLILFQFAAFV 146 + F+++ +++ T R ++ +R + QR+FW +V P + ++ +F Sbjct: 91 GSQTFVVLCACAILRWQLGTRWRYGLT---SRYVWQRLFWLGLVTPIGIKCSMYLVGSFF 147 Query: 147 GLLASRENLVGVMPFNLGTLINYQALLVGNLIGVPLCYFIIRVVRNPFYLRSYYSQLKQQ 206 G + T+++ +L LI L Y++ R++ +P +++Q+ + Sbjct: 148 DFPLKISTFFGDAD-AIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSP-----HFAQILWR 201 Query: 207 VDAKVT----KKEFAL-WLLALGALLLLLCMPLNEKSTIFSTNYTLSLLLPLMMWGAMRY 261 D + K+ F L WL AL LLLLLC P F Y + + + G + Sbjct: 202 RDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYEND---FIAGYLVPVFFIIFTLGVGKL 258 Query: 262 GYKLISLLWAVVLMISIHSYQNYIPIYPGYTTQ--LTITSSSYLVFSFIVNYMAVLATRQ 319 Y ++L WAV + ++ QN++ G T+ L + + FS + YM + R Sbjct: 259 RYPFLNLTWAVSTLCLLNYNQNFLQ---GVETEYSLAFILAVLISFSVCLLYMVRIYHRS 315 Query: 320 RAVVRRIQRLAYVDPVVHLPNVRALNRALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQY 379 + RR A DP+ LPN RAL +A + C LRI +E + ++YG+M+R+ Sbjct: 316 EWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHC 375 Query: 380 KQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLKQFRFFWDGMPMQP 439 + + L PL++ E +YQL G++L L L+ + R+ + + L + W+ + Sbjct: 376 IRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSRQIHWNNTGLDM 435 Query: 440 QIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNR 499 G ++ + LLG+L+ +AE S + + R M + + +V ++N Sbjct: 436 GYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM-VSGQTTKQVLLLNT 494 Query: 500 LQQALEHNHFFLMAQPITGMRGDVYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDM 559 ++ AL+ L AQPI G+ Y EIL R+K + +++PD FLP+ +F LS+ D+ Sbjct: 495 IRTALDQGDLLLYAQPIRNKEGEGYDEILARLKYDGG-IMTPDKFLPLIAQFNLSARFDL 553 Query: 560 WVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTE 619 V+E L+++A + RF++NL P ++ Q + +L +Y I +I E+TE Sbjct: 554 QVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITE 613 Query: 620 SNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSN 679 A +N + + ++ L + G +IAIDDFGTGYA+Y RLK + AD++KIDG F+++IV+N Sbjct: 614 EQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTN 673 Query: 680 SLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLID 735 +LD IV SI LA+ K + VVAE+VE ++ + + LG+ Y+QGYLIG+PQPL D Sbjct: 674 TLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 >UniRef50_D0ZFH2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Edwardsiella tarda EIB202 RepID=D0ZFH2_EDWTE Length = 740 Score = 303 bits (775), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 187/583 (32%), Positives = 322/583 (55%), Gaps = 19/583 (3%) Query: 159 MPFNLGTLINYQALLVGNLIGVPLCYFIIRVVRNPFYLRSYYSQLKQQVDAKVTKKEFAL 218 +PF L+ + +++ + P Y+++R++ NP LR++ ++ + + + Sbjct: 173 LPF---ALLALEGMILSCVALTPALYYLLRMLLNPGSLRAFLLDCRRALRRDIRGLFLPI 229 Query: 219 WLLALGALLLLLCMPLNEKSTIFSTNYTLSLLLPLMMWGAMRYGYKLISLLWAVVLMISI 278 ++ A+GAL C P ++ + Y LL L ++ + + Y+ + LLWA+ ++ + Sbjct: 230 YVAAMGAL----CFP---PASHVNLGYLTPLLFVLFVFASFHFRYRAVLLLWALTVLGLL 282 Query: 279 HSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYV--DPVV 336 N+I + + QL SS+ + FS + YMA + TR + R RL D +V Sbjct: 283 ACSANFIQLGNRHY-QLAFLSSALIAFSIALVYMAQVITRNDRMRRLYLRLRLRRRDGLV 341 Query: 337 HLPNVRALNRALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGED 396 LPN RALN L P LC LR+ +++L + +G+ +R K +L+ L+PLL PGE Sbjct: 342 DLPNFRALNDYLARRPCGTLCILRLSNLDILSRCHGMTMRAATKSQLAAHLAPLLRPGER 401 Query: 397 VYQLSGNDLALRLNTESHQERITALDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIY 456 VYQ+ G +L + L ++ RI A+ + L W P+ Q GV+Y + I+ Sbjct: 402 VYQMPGAELLIYLQADADLPRINAIRATLIAQALVWQQHPVTLQYGVAYSPFDAHRQSIH 461 Query: 457 LLLGELNTVAELSIVTNA--PENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQ 514 ++G+L+ +AE + N P A + ++V + ++ +AL+ N L AQ Sbjct: 462 AVVGQLSYLAERACRDNVILPLYGNEADA---NAAVNEQVFWLQKITRALQENALLLYAQ 518 Query: 515 PITGMRGDVYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRA 574 PI G Y+EIL R++ + ++L+ P F+P F L + D+ +IE+ ++ + Sbjct: 519 PIVHREGQRYYEILARLQ-DGEQLVLPGKFIPFITAFNLCAQFDLLIIENVVRHIHRAGL 577 Query: 575 KMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQ 634 + F++NL P ++ Q ++ L +YQ+ +IFE+TE L + A T++ Sbjct: 578 DSSSTCFSVNLMPLTLMQNGVAAQIIALFERYQVRPQAVIFEITEQQYLLDENAALETVR 637 Query: 635 HLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLAR 694 L++ +IAIDDFGTG ++Y RLK++NAD++KIDG F+++IVS+SLD I+ SIC +AR Sbjct: 638 ALRDYCFKIAIDDFGTGLSNYQRLKHLNADVVKIDGMFVKDIVSSSLDRLIIKSICDIAR 697 Query: 695 MKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTL 737 +++ VVAEYVE+ E E + SLG+ Y+QG+L+G+P+PL L Sbjct: 698 ERQLQVVAEYVESREQMEILCSLGVQYLQGFLLGEPRPLAQAL 740 >UniRef50_A7MP46 Putative uncharacterized protein n=2 Tax=Bacteria RepID=A7MP46_ENTS8 Length = 735 Score = 296 bits (758), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 227/714 (31%), Positives = 371/714 (51%), Gaps = 35/714 (4%) Query: 36 AHISSGEVFLFYLPLALMISMMMFFS-WAALP-GIALGIFVRKYAELGFYETLSLTANFI 93 A + ++L +LPL+LM++M+ F +A P I F + L + L+ A+F+ Sbjct: 37 AIVDGAGIYLTFLPLSLMLAMIYLFGRYALFPLVITFLFFYGWFFPLNSQQLLAFIASFL 96 Query: 94 IIIILCWGGYRVFT-PR-RNNVSHGDTRLISQRIFWQIVFPATLFLILFQFAAFV-GLLA 150 + +IL R PR R +S T L R+F P L L +F V G Sbjct: 97 LPVILTCAILRALKGPRWRFAISRHSTGL---RLF----LPGLLAPCLIKFLMVVSGYWL 149 Query: 151 SRENLVGVMPFNLGT----LINYQALLVGNLIGVPLCYFIIRVVRNPFYLRSYYSQLKQQ 206 ++ F T ++ Q L+ ++I V + Y+ +R+ + + R+++ + Sbjct: 150 DYPEVISSY-FGESTSFYSVVTVQGLMAASVIFVDIFYYPVRMALSRAFARAFWHRCVIP 208 Query: 207 VDAKVTKKEFALWLLALGALLLLLCMPLNEKSTIFSTNYTLSLLLPLMMWGAMRYGYKLI 266 + A K A W + +LL + L + YTL ++ L G G LI Sbjct: 209 LLAPEKKVLAAGWF---AGVFILLILFLLPFKLFLISIYTLPVIFVLFTAGIFLIGPVLI 265 Query: 267 SLLWAVVLMISIHSYQNYIPIYP-GYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRR 325 +LLW+ L++ + S N++P G+ L S ++ F+ + +M V+ + + R+ Sbjct: 266 TLLWSFSLLLLLGSSSNFLPAEKNGFL--LAFMLSGFIAFTVSMRFMTVIFNKSEWMKRQ 323 Query: 326 IQRLAYVDPVVHLPNVRALNRALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSH 385 + LA DP+ LPN+RAL R L+ ALC LR+ +E L ++YG+M+RIQ K++++ Sbjct: 324 YRMLALTDPLTRLPNLRALERHLQGISGGALCCLRVANLEFLSRHYGLMMRIQCKKEVTT 383 Query: 386 WLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLKQFRFFWDGMPMQPQIGVSY 445 L P L GE V+QL +DL + L Q R+ L L R W+G Q+ + Y Sbjct: 384 LLLPWLNTGEKVFQLPDSDLLIYLAGPEPQSRLRHLVDLLNSKRIQWNGA----QLELDY 439 Query: 446 CYVRSPV------NHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNR 499 +PV +Y +G+L+ +AE++ + ++ R + L + + V M+ + Sbjct: 440 SAAWAPVPRAQTPEELYRTIGQLSYLAEVAGPGDPVVALESR-SQGLSGQTSEPVLMLQK 498 Query: 500 LQQALEHNHFFLMAQPITGMRGDVYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDM 559 ++QAL L AQPI +G+ Y EIL R++ + ELI P F+P+ F LS+ DM Sbjct: 499 VKQALSEGGVTLFAQPIQNAQGEGYAEILARLECDG-ELIMPAKFIPLITRFNLSARFDM 557 Query: 560 WVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTE 619 V+E L ++ + P RF++NL P ++ Q + L +Y++ +I EVTE Sbjct: 558 QVLEKLLIYLHTHPQTRPGARFSVNLMPLTLEQQGIAQQAIALFERYRVPISAVILEVTE 617 Query: 620 SNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSN 679 AL+ + + LQ G IAIDDFGTGYA++ RLKN+ AD++KIDG FIRN+VSN Sbjct: 618 EQALSGSENTVQNISLLQARGFCIAIDDFGTGYANFERLKNLQADIIKIDGCFIRNVVSN 677 Query: 680 SLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPL 733 + D +V SIC LA+ + + VVAE+VE R+ + +LG++Y+QG+L G+P+ L Sbjct: 678 TFDALVVKSICDLAKARSLTVVAEFVETPAQRDLLFALGVEYIQGHLPGRPERL 731 >UniRef50_A3JCF9 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=A3JCF9_9ALTE Length = 1133 Score = 218 bits (554), Expect = 9e-55, Method: Compositional matrix adjust. Identities = 138/439 (31%), Positives = 232/439 (52%), Gaps = 28/439 (6%) Query: 317 TRQRAVVRRIQRLAYVDPVVHLPNVRALNRALR--------DAPWSALCYLRIPGMEMLV 368 T + + +++ A DP+ L N R R+L+ +A LCYL + +++ Sbjct: 690 TNSKLLQQQLSFQAIHDPLTGLINRREFERSLQSLIQDVEHNASEHLLCYLDLDQFKIVN 749 Query: 369 KNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNT---ESHQERITALDSHL 425 G + ++L++ L PLL + + +L G++ + L+ QE L + Sbjct: 750 DTCGHQAGDELLKQLANTLKPLLRQSDILARLGGDEFGVLLSHCPLNQGQEIAEQLREAV 809 Query: 426 KQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQR-RGAM 484 F F WDG + + ++ P + ++L + +T L+ +N+ R R + Sbjct: 810 CGFHFSWDGQVFAVGVSIGIVHLTQPCGDLGIMLSKADTACYLA------KNLGRNRVHL 863 Query: 485 YL--QRELK---DKVAMMNRLQQALEHNHFFLMAQPITGM-RGD---VYHEILLRMKGEN 535 +L E+K D+V +NR++QAL +HF L QPI + + D ++EILLR+K Sbjct: 864 HLPDSSEVKLQTDQVQWVNRIRQALNEDHFRLFCQPIMALDQADADPTHYEILLRLKDAR 923 Query: 536 DELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAEN-RAKMPAHRFAINLSPTSVCQAR 594 ++ P +FLP A F L ID+WVI +TL +M R AINLS S+ Sbjct: 924 GHMVPPGAFLPSAERFNLMPQIDLWVIRNTLAWMGGQLRGSHLDLHCAINLSGASIGHPE 983 Query: 595 FPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYAS 654 + + L K+++ A ++ FE+TE+ A+ ++K+AQ + L+ LGC+ A+DDFG+G +S Sbjct: 984 CLQTIREQLTKHRVPAHRVCFEITETTAMADLKKAQDFIGELRTLGCKFALDDFGSGLSS 1043 Query: 655 YARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAV 714 + L++++ D LKIDG FIR + + +D IV SI + + + VAE+VE+ E + Sbjct: 1044 FGYLRHLSVDYLKIDGIFIRELAQSPIDRAIVDSINTIGHIMGLKTVAEFVEDGATHEIL 1103 Query: 715 LSLGIDYMQGYLIGKPQPL 733 LG+DY QGY +G+PQPL Sbjct: 1104 HQLGVDYAQGYHLGRPQPL 1122 >UniRef50_A6F7G4 PAS sensor diguanylate cyclase and phophodiesterase n=2 Tax=Moritella sp. PE36 RepID=A6F7G4_9GAMM Length = 911 Score = 214 bits (544), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 135/443 (30%), Positives = 231/443 (52%), Gaps = 21/443 (4%) Query: 317 TRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRDAPWSA--------LCYLRIPGMEMLV 368 T+ R + ++I A D + L N L DA S LC+L + +++ Sbjct: 470 TKSRIISKQIAYQAKHDMLTGLINRYEFEHQLSDAVCSVQGSQLTHVLCFLDLDQFKIIN 529 Query: 369 KNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALD---SHL 425 G + ++++ + L+P + + +L G++ A+ + E + A + + Sbjct: 530 DTCGHAAGDELLRQIAGLIGDNLKPNDTLARLGGDEFAVLMRDCQLTEAVVAANEILDKV 589 Query: 426 KQFRFFWDG--MPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGA 483 K+F+F W + IGV+ S L+ +L A + N Sbjct: 590 KKFQFIWKKSCFSVGVSIGVAEICNTSGNTSEVLIHADLACYAAKDLGRNRVHTYHDNDE 649 Query: 484 MYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDVYH---EILLRMKGENDELIS 540 + R+ D+ +N +++AL + F L AQPI ++ E+LLRM+ +N LIS Sbjct: 650 LLTARD--DEFRWVNEIKEALNEDRFELYAQPIVALQDTAQKPIFEVLLRMQDKNGALIS 707 Query: 541 PDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPA-HRFAINLSPTSVCQARFPVEV 599 P FLP+A + LS ID WVI+ TLQ+M + ++ +INLS S+ + + Sbjct: 708 PGVFLPIAERYNLSEPIDRWVIDRTLQWMKAHSQQLDMFDHISINLSGASLGDSDLLQHI 767 Query: 600 SQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLK 659 + + ++ Q++FE+TE+ A++N+ A I + L GCQ A+DDFG+G +S+A LK Sbjct: 768 MTTITQAKVSPQQIMFEITETAAISNLASATIFINTLSTFGCQFALDDFGSGLSSFAYLK 827 Query: 660 NVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGI 719 N+ + LKIDG FI++I++N +D +V SI + + K+ +AE+VEN+ I++ V ++GI Sbjct: 828 NLPVNTLKIDGIFIKDILTNPIDAAMVKSINEIGHLMKLKTIAEFVENDAIKQKVETIGI 887 Query: 720 DYMQGYLIGKPQPLID--TLNEI 740 D+ QGY IGKPQP+ TLN++ Sbjct: 888 DFAQGYGIGKPQPIDKMLTLNQL 910 >UniRef50_Q21LK5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21LK5_SACD2 Length = 587 Score = 199 bits (507), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 111/394 (28%), Positives = 209/394 (53%), Gaps = 15/394 (3%) Query: 355 ALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLAL---RLNT 411 A+ Y+ + ++++ G + + ++L H L + + ++ G++ AL Sbjct: 193 AMIYINVDQLKVVNDTCGHIAGDELLKQLVHILKNTDVTYDYLARVGGDEFALIKEDATI 252 Query: 412 ESHQERITALDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIV 471 E +E + S ++ F WD + + + + I ++G + E + V Sbjct: 253 EQAEEVAEIIRSTVEDISFSWDDKNFRQSLSIGVALSSPRLCTITEIIGAADAACEQAKV 312 Query: 472 TNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD---VYHEIL 528 + + + ++ ++R+QQA + F L QPI + V++E+L Sbjct: 313 AGKNRVHVHKDTRAASEDSRHQMRWVSRIQQAFIEDRFELFFQPIVALHHSDQYVHYELL 372 Query: 529 LRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRF-----AI 583 +R + EN+ +SP++FLP A ++GLS+ ID+WV+ L F+A N P H + +I Sbjct: 373 IRYRDENNRFVSPNAFLPAAEKYGLSTQIDLWVLTTALDFLASN----PEHTYKLQCCSI 428 Query: 584 NLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQI 643 NLS S+ + ++QL+ ++ FE+TE++A+ N+ +A ++ ++ +GC+ Sbjct: 429 NLSAHSLSSHQTRSAIAQLIIGCGFPPEKVCFEITETSAIKNLDEATAFIEEMKLIGCRF 488 Query: 644 AIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAE 703 A+DDFGTG++S LK++N D LKIDG+FIRNIV + +D+ +V ++ + + + +AE Sbjct: 489 ALDDFGTGFSSLGYLKSLNVDYLKIDGAFIRNIVHDKIDHAMVTAVASIGKEMNIATIAE 548 Query: 704 YVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTL 737 +VENEEI+ + + +DY QG+ KP PL D + Sbjct: 549 FVENEEIKSTLSQMAVDYGQGFGFAKPMPLNDAV 582 >UniRef50_Q2SJ14 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=2 Tax=Gammaproteobacteria RepID=Q2SJ14_HAHCH Length = 559 Score = 196 bits (499), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 138/446 (30%), Positives = 230/446 (51%), Gaps = 38/446 (8%) Query: 314 VLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRDAPWSA--------LCYLRIPGME 365 V R+RA R + +AY D + L N R R L+ A S+ L YL + + Sbjct: 126 VRDARKRAE-RTLHHMAYHDSLTDLVNRREFERRLKSALNSSKERGLTHMLLYLDLDQFK 184 Query: 366 MLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERIT---ALD 422 ++ G + + ++L+ LS + + + +L G++ + L + + + I L+ Sbjct: 185 IINDTCGHVAGDELLKQLAILLSKHIRESDTLARLGGDEFGILLESCAERRAIQLAQELN 244 Query: 423 SHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAE-LSIVTNAPENMQRR 481 S ++ FRF W P + + V S E + AE LS A + + Sbjct: 245 SEVRNFRFVWQQKPFTISLSIGIVAVTS----------EYGSGAEILSHADIACYAAKDK 294 Query: 482 GAMYLQRELKDKVAMM---------NRLQQALEHNHFFLMAQPITGM---RGDVYH-EIL 528 G +Q D V MM +R++ ALE N FFL QP+ + RG H E L Sbjct: 295 GRNTIQVYQSDDVEMMRRRTEMQWISRIRIALEENRFFLYQQPMERIGPDRGAGLHTEFL 354 Query: 529 LRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAH-RFAINLSP 587 LR++ E DE+I P +F+P A + L ID VIE Q++AE+ M + INLS Sbjct: 355 LRLR-EGDEVIPPGAFIPAAERYSLMPLIDRRVIELVFQYLAESGKGMADKGAYFINLSG 413 Query: 588 TSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDD 647 S+ + ++ + L KY+I ++ FE+TE+ A+ ++ + ++ ++E G + A+DD Sbjct: 414 ASLSDDKVFEDIRKNLRKYKIRPERICFEITETAAIAHLAETVEFIREIREEGFKFALDD 473 Query: 648 FGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVEN 707 FG G +S++ LK + D LKIDGSF+RN++S+ +D IV + + + +AE+VEN Sbjct: 474 FGCGMSSFSYLKTIPVDYLKIDGSFVRNMLSDPIDVGIVEACNRIGHAAGLTTIAEFVEN 533 Query: 708 EEIREAVLSLGIDYMQGYLIGKPQPL 733 E+I+E ++ +G+DY QG+ + KP+PL Sbjct: 534 EQIKEKLIEIGVDYAQGFAVSKPKPL 559 >UniRef50_B7K4E7 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Cyanobacteria RepID=B7K4E7_CYAP8 Length = 715 Score = 189 bits (481), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 144/476 (30%), Positives = 227/476 (47%), Gaps = 42/476 (8%) Query: 288 YPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRA 347 YP + I S+ V ++ + V T R++ R++ A D + L N + Sbjct: 249 YPIDDSAAPIQDSNGQVIGAVIVFRDV--TEARSLNRQLSWQASHDSLTGLINRLGFEQK 306 Query: 348 LRDAPWSA--------LCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQ 399 L +A SA LCYL + +++ G + ++++H L + + + + Sbjct: 307 LEEALLSAKKENQHHVLCYLDLDQFKVVNDTCGHAAGDELLRQITHLLQQRVRTSDTLAR 366 Query: 400 LSGNDLALRLNT---ESHQERITALDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIY 456 L G++ A L+ E E +++FRF W+ IGVS V N Sbjct: 367 LGGDEFAFLLHQCSLEKATEIAETFRELIEKFRFCWNNKTFS--IGVSIGVVEIDKNS-- 422 Query: 457 LLLGELNTVAELSIVTNAPENMQRRGAMYL----------QRELKDKVAMMNRLQQALEH 506 + N+V L+ + R + + QR+ + V +N QALE Sbjct: 423 ---KDKNSVLALADAACYAAKGKGRNCVQVYQVDNHELLKQRKERQWVVQIN---QALED 476 Query: 507 NHFFLMAQPITGMRGD---VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIE 563 N F L +Q IT + +Y+EILLR+ +N +L+SP +FLP A +GL +ID WVI Sbjct: 477 NRFRLYSQKITPLNSHLKPIYYEILLRLLDDNGQLVSPGNFLPAAERYGLMPAIDRWVIS 536 Query: 564 HTLQ------FMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEV 617 L+ N++ + +AINLS S+ +F + + L +I L FE+ Sbjct: 537 TFLKKYDNYYHQTVNKSDFEQNLYAINLSGASINSEQFLEFLKEQLTNSKIPLKNLCFEI 596 Query: 618 TESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIV 677 TE+ A+ N QA + LQ+LGC AIDDFG G S+ LK+ + LKIDGSF+RN+V Sbjct: 597 TETTAIANFDQAIELINELQQLGCCFAIDDFGHGMNSFDYLKHFPVNYLKIDGSFVRNLV 656 Query: 678 SNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPL 733 + +D IV S + + +AE+VEN I + ++G+DY QGY+I KP P Sbjct: 657 QSEVDQAIVESFNRIGHIMNFQTIAEFVENAAILSKIEAIGLDYAQGYVIAKPVPF 712 >UniRef50_A6AJX1 FOG: EAL domain protein n=3 Tax=Vibrio harveyi RepID=A6AJX1_VIBHA Length = 741 Score = 189 bits (479), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 127/424 (29%), Positives = 217/424 (51%), Gaps = 23/424 (5%) Query: 328 RLAYVDPVVHLPNVRALNRALRDAPWSALCYLRI-PGMEMLVKNYGIMLRIQYKQKLSHW 386 R +DP L N+ L + S L YL + P + ML + G + Q +LS + Sbjct: 314 RSERIDPYSGLSNIAQLKEDISHQSRSLLIYLDLTPTLSMLT-DLGHEGKSQLIMQLSEF 372 Query: 387 LSPLLEPGEDVYQ--LSGNDLALRLNTESHQERITALDSHLKQFRFFWDGMPMQPQIGVS 444 L Y+ S L+ +++ +E + + +L+ F+F+W G + Sbjct: 373 LYSRNNSINRCYRPPFSTGLLSFTHYSDTAEEDLNEVAEYLESFQFYWRGTSVA------ 426 Query: 445 YCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMY---LQRELKDKVAMMNRLQ 501 + SP L+ + + +SI+ + P Q +++ +Q D+V +N +Q Sbjct: 427 ---LVSPTIFCTLVSQDQDIEKVVSILCDQPP--QSDSSIHWINIQSFEMDRVDKLNHIQ 481 Query: 502 QALEHNHFFLMAQPITGMR----GDVYHEILLRMKGENDELISPDSFLPVAHEFGLSSSI 557 Q + F L QP + E+LLR+K ++ +++ P +F P+ ++FGL + Sbjct: 482 QVFKREQFELFCQPYMKLSESEPSKHSFEVLLRLKEQDGKVLPPSAFFPLINQFGLELKL 541 Query: 558 DMWVIEHTLQFMAEN-RAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFE 616 D WVI +T + +++ + AINL+ ++ V + + + I ++ FE Sbjct: 542 DHWVILNTFRMLSDKVKNWNNIGHCAINLTAKTLSAENLAVRIIESAQSFSIPLNKICFE 601 Query: 617 VTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNI 676 +TES+AL N +QA L HL++ GC+IAIDDFGTGYAS+A L+ + D+LKI+G+F+R I Sbjct: 602 ITESSALINEQQAIANLSHLRDHGCKIAIDDFGTGYASFAYLRRLPLDILKIEGAFVREI 661 Query: 677 VSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDT 736 + D IV+SI +A+ + VAE+VE+ + +LGID+ QGY + KP PL Sbjct: 662 TQSETDRLIVSSIVTVAKEMHLETVAEFVESTAHIAILRNLGIDFAQGYGVAKPMPLSKC 721 Query: 737 LNEI 740 L+E+ Sbjct: 722 LDEL 725 >UniRef50_B0C6M6 PAS sensor diguanylate cyclase/phophodiesterase, putative n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C6M6_ACAM1 Length = 935 Score = 189 bits (479), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 120/391 (30%), Positives = 209/391 (53%), Gaps = 17/391 (4%) Query: 355 ALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRL-NTES 413 ALC+L + +++ G + ++++ L + + + +L G++ L L N Sbjct: 547 ALCFLDLDQFKIVNDTVGHLAGDALLKQVADLLQAHIRQTDILSRLGGDEFGLLLKNCSL 606 Query: 414 HQERITA--LDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIV 471 + RI L S L QFRF W+G + + + + +++ LL + + Sbjct: 607 EKARIVTENLISELSQFRFIWEGQLFKIGASIGIVPITADTDNLTLLFAKADVAC----- 661 Query: 472 TNAPENMQRRGAMYLQR-----ELKDKVAMMNRLQQALEHNHFFLMAQPI----TGMRGD 522 +A + + R +Y + E ++ + +++ALE + F L QPI T + Sbjct: 662 YSAKDRGRNRVHLYHAQAQGVTEQHSELMQVATIRKALEESRFRLYYQPIVPLDTETKIP 721 Query: 523 VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFA 582 V +EILLR++ + +++SP+SFLP A +GL ID WVIE+ L R + Sbjct: 722 VCYEILLRLQDTDGKILSPNSFLPAAERYGLMLEIDKWVIENVLIKYGAYFQSQENTRIS 781 Query: 583 INLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQ 642 INLS +S+ + L K Q+E ++ FE+TE+ A++N KQA ++ ++E GC Sbjct: 782 INLSGSSLDDDALLDFIQTQLNKTQLEPHKICFEITETVAISNFKQAIQCIEKIKEFGCH 841 Query: 643 IAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVA 702 A+DDFG+G++S++ LK D LKIDGS +R++V ++ +V++I + R + +A Sbjct: 842 FALDDFGSGFSSFSYLKRFPIDYLKIDGSLVRDMVEDATHQVMVSAINQICRAMHIKTIA 901 Query: 703 EYVENEEIREAVLSLGIDYMQGYLIGKPQPL 733 E+VEN + A+ +G+DY+QGY +GKPQPL Sbjct: 902 EFVENGDTIVALEQIGVDYLQGYAMGKPQPL 932 >UniRef50_Q2YC85 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2YC85_NITMU Length = 951 Score = 185 bits (469), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 119/397 (29%), Positives = 201/397 (50%), Gaps = 16/397 (4%) Query: 349 RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLAL- 407 + A L YL + +++ G + + ++L+ L L + + +L G++ L Sbjct: 556 KGADEHTLLYLDLDQFKIVNDTCGHLAGDELLKQLTSLLQAKLRKDDTLARLGGDEFGLL 615 Query: 408 --RLNTESHQERITALDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTV 465 R S L +++FRF W+ I + +L +T Sbjct: 616 LERCPRGSAFRVAEVLRQTVQEFRFVWEERIFSLGISIGLATFSGGEQTFSDVLRMADTA 675 Query: 466 AELSIVTNAPENMQRRGAMYL--QRELKDKVAMMN---RLQQALEHNHFFLMAQ---PIT 517 L A + + R +Y + L+ + M RL +AL+ F L +Q P++ Sbjct: 676 CFL-----AKDKGRNRVQLYASDDKNLEKRRGEMGWVERLHKALDKQRFVLYSQKILPLS 730 Query: 518 GMRGDVYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMP 577 ++EILLRMKGEN EL+ P +F+P A +GL +D WVI + A + ++ Sbjct: 731 APSSTSHYEILLRMKGENGELVPPMAFIPAAERYGLMPQLDRWVITNAFAQYASHPSRGI 790 Query: 578 AHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQ 637 INLS S+C V + QI+ + FE+TE+ A+ N+ QA ++ L+ Sbjct: 791 KDTCTINLSGASICDEHLYDFVVDQFKQSQIDPAGICFEITETVAIANLTQAATLIRKLK 850 Query: 638 ELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKK 697 ELGC+ ++DDFG+G +S+ LK++ D LKIDG+FI+ ++S+ +D+ +V +I H+ + K Sbjct: 851 ELGCRFSLDDFGSGMSSFTYLKHLLVDYLKIDGAFIKGMLSDPIDHAMVEAINHIGHVMK 910 Query: 698 MLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLI 734 + +AE+VE E EA+ +G+DY QGY I +P+P I Sbjct: 911 IQTIAEWVEEESFLEALRKIGVDYAQGYAIEEPRPAI 947 >UniRef50_C0N6D3 Putative uncharacterized protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N6D3_9GAMM Length = 805 Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 127/454 (27%), Positives = 233/454 (51%), Gaps = 35/454 (7%) Query: 317 TRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL----RDA----PWSALCYLRIPGMEMLV 368 T R + ++ A D + L N R L +DA ALC++ + +++ Sbjct: 352 TEARVLANKLSYQATHDNLTGLINRTEFERRLIELVQDARQHDSVHALCFIDLDQFKVIN 411 Query: 369 KNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLA--LRLNTESHQERI-TALDSHL 425 G + + ++L L + + + +L G++ A +R E++ T + + Sbjct: 412 DTCGHIAGDELLRQLGQRLIGQVRKSDTLARLGGDEFAILMRHCDPGQSEKVATEVREVI 471 Query: 426 KQFRFFWDG--MPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGA 483 + F+F WD + IGVS + R + +L + A +N R Sbjct: 472 ELFQFVWDSRVFTIGASIGVSSIH-RHTTDMTEVL-------KQADTACYAAKNAGRNRV 523 Query: 484 MYLQRELKDKVAM------MNRLQQALEHNHFFLMAQPITGMR---GDVYHEILLRMKGE 534 Q + K V +N ++ AL N F L QPIT + ++Y E+LLR++ + Sbjct: 524 YIYQDDDKHLVEQQGEFHWVNEIKLALTENRFELFVQPITSAKSGKAEIY-EVLLRLRNK 582 Query: 535 NDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPA-HRFAINLSPTSVCQA 593 +L P +FLP A + LS +D WV+E T ++ ++ ++P + AINLS S+ Sbjct: 583 QGDLSPPSAFLPSAERYNLSDKVDRWVLEKTFDWLEKHINQVPDLRKIAINLSGASLGND 642 Query: 594 RFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYA 653 +S L K + A ++ FE+TE+ A++N+++A + L +LGC+ ++DDFG+G + Sbjct: 643 EMLKLISDLFEKARFSASKIKFEITETAAISNLREATRFISELSKLGCEFSLDDFGSGLS 702 Query: 654 SYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREA 713 S+ LK++ +KIDG F++++ + LD+++V SI + + + +AE+VENE++ + Sbjct: 703 SFGYLKHLPVKSIKIDGMFVKDMAHDPLDFEMVKSINDIGHVMGLKTIAEFVENEDVWQK 762 Query: 714 VLSLGIDYMQGYLIGKPQPLIDTLNEIEPIRESA 747 + S+GIDY QGY +G+P P ID++ ++P + S+ Sbjct: 763 LQSIGIDYGQGYHLGRPVP-IDSI--LKPTQNSS 793 >UniRef50_B0BZ23 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0BZ23_ACAM1 Length = 964 Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 130/414 (31%), Positives = 214/414 (51%), Gaps = 26/414 (6%) Query: 342 RALNRALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLS 401 ++N A D LCYL + +++ G ++ Q L+H L L P + + +L Sbjct: 559 ESVNLAKEDDTQYVLCYLDLDQFKLVNDTAGHIVGDQLLTDLAHLLKQKLRPDDVLGRLG 618 Query: 402 GNDLALRLNT---ESHQERITALDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLL 458 G++ L + E Q L + ++ FRF W Q ++GVS V Sbjct: 619 GDEFGLLMQDCTLEEAQAFCEKLVTQVQNFRFQW--RDSQFRVGVSVGIV--AFADASYS 674 Query: 459 LGELNTVAELSIVTNAPENMQRRGAMYL----QRELKD---KVAMMNRLQQALEHNHFFL 511 EL + A+L+ RG +Y+ REL ++A + + QA+E FL Sbjct: 675 AEELLSRADLACYKAKDSG---RGRVYVANQNDRELDHFQLQMAHIADIPQAIEEERLFL 731 Query: 512 MAQPITGMRGDV----YHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTL- 566 + QPI +R ++EILLR++ + +I P F+P A +G+ + ID WV+E+TL Sbjct: 732 VKQPIQSIRQPTSLHRHYEILLRLRDGKNNIIGPGLFIPAAERYGVIALIDHWVLENTLD 791 Query: 567 QFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNV 626 Q+ + + +INLS S+ R +V L+ + + + E+TE+ + + Sbjct: 792 QYY---QCGLEDEMVSINLSGASINDDRATAKVIALITQSSVPPSNICIEITETATIAQL 848 Query: 627 KQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIV 686 QA ++ L+++G + A+DDFG+G +S + LK++ D LKIDGS I+NI D +I+ Sbjct: 849 DQALRFIESLKDIGVKFALDDFGSGVSSLSYLKSLPVDYLKIDGSLIKNIAVVESDREII 908 Query: 687 ASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEI 740 I LA + M +AE+VENE+I E + +G+DY QGY IGKP+PL+ LN++ Sbjct: 909 YLINELAHKRGMKTIAEFVENEQILEQLRIIGVDYAQGYGIGKPEPLM-ALNQV 961 >UniRef50_A0Y401 PAS sensor diguanylate cyclase/phophodiesterase n=1 Tax=Alteromonadales bacterium TW-7 RepID=A0Y401_9GAMM Length = 739 Score = 184 bits (466), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 130/466 (27%), Positives = 238/466 (51%), Gaps = 27/466 (5%) Query: 295 LTITSSSYLVFSFIVNYMAVLATRQRAVVRRI--QRLAYV---DPVVHLPNVRALNR--- 346 + I S +++V S ++ T R+ ++L+Y D + L N R R Sbjct: 277 VNILSRAFVVESEEGEITRLVGTHVDITARKKSEEKLSYQSSHDSLTGLANRREFKRRVE 336 Query: 347 -----ALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLS 401 A ALCY+ + +++ G + + ++L L ++ + V +L Sbjct: 337 LLLSVAAEKRVDHALCYMDLDQFKVVNDTCGHLAGDELLRQLGSLLQKVVRKTDVVARLG 396 Query: 402 GNDLALRLNTES--HQERITAL-DSHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLL 458 G++ A+ + S + R+T+L ++ +RF W+G + IGVS ++ + Y+ Sbjct: 397 GDEFAVLMENCSFDNAHRVTSLIQKEIEDYRFVWEGRSFR--IGVSMGLIQ--ITDKYVD 452 Query: 459 LGELNTVAELSIVTNAPENMQRRGAMYLQREL----KDKVAMMNRLQQALEHNHFFLMAQ 514 E+ +A+++ + R Y E + ++ +NR+Q A++ N F + AQ Sbjct: 453 FTEVLKLADVACYIAKEKGRNRIHVHYDDDEELAVHQGEMQWVNRVQDAIDENRFKIYAQ 512 Query: 515 PITGMRGDV--YHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAEN 572 I + D ++E+LLRM + +I P +FLP A + L +D W+IE+ + + N Sbjct: 513 LIEPLACDKNKHYELLLRMVDDQGGIIPPGAFLPPAERYQLIVKVDSWMIENAFKMILNN 572 Query: 573 RAKMPAHRF-AINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQI 631 + F +INLS S+ F + V++ L + ++ FE+TE+ A++N++ A Sbjct: 573 PNFLKGVNFLSINLSGQSLTNEDFLIFVTEQLTLLGEHSEKICFEITETAAISNLELASK 632 Query: 632 TLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICH 691 + L+ LGC A+DDFG+G +S+ LKN+ D LKIDG F+++I + +D+ +V SI Sbjct: 633 FISQLKVLGCCFALDDFGSGLSSFGYLKNLKVDYLKIDGIFVKDIEVDPIDHAMVKSINE 692 Query: 692 LARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTL 737 + + M +AE+VE I++ +L +G+DY QGY + KPQP+ + L Sbjct: 693 IGHVMGMKTIAEFVETSRIKQTLLEMGVDYAQGYAVHKPQPIEELL 738 >UniRef50_B4X4M1 PAS fold family n=2 Tax=Alcanivorax RepID=B4X4M1_9GAMM Length = 864 Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 128/434 (29%), Positives = 221/434 (50%), Gaps = 22/434 (5%) Query: 317 TRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRD------APWSALCYLRIPGMEMLVKN 370 T +RA+ ++++ A D + L N R L++ A S LC++ + +++ Sbjct: 412 TSRRAMQKKLRYHATHDALTGLTNRREFENTLQESLDEPGAEHSMLCFIDLDRFKVVNDT 471 Query: 371 YGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALD---SHLKQ 427 G + ++ + + + G+ V +L G++ L L Q I + L Sbjct: 472 AGHVAGDALLRECARVIGRQVREGDVVARLGGDEFGLLLRHCPAQRAIQIAERLIGALGD 531 Query: 428 FRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQ 487 RF W IG S V+ N I + E + A+++ A + R ++Y Sbjct: 532 IRFAW--KESLYDIGASAGLVQLDANVITVE--EAMSRADVACYA-AKHRGRNRVSVYTP 586 Query: 488 RELKD-----KVAMMNRLQQALEHNHFFLMAQ---PITGMRGDVYHEILLRMKGENDELI 539 + + ++ M L+++LE N F L AQ PI ++E+LLR++ N +++ Sbjct: 587 DDSEASRRHLELQMAAGLRESLESNRFLLYAQEIRPIDASTEPSHYEVLLRLRDRNGDIL 646 Query: 540 SPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEV 599 +P SF+P A + + ID WV+ L +++ A +P AINLS TS+ F + Sbjct: 647 NPGSFIPAAERYQMMPHIDRWVLTQLLVSLSDELAALPQLNIAINLSATSLDDPTFMPFL 706 Query: 600 SQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLK 659 LL+K + +L FE+TE+ + + A L ++E GC++A+DDFG+G++S++ LK Sbjct: 707 ESLLSKTSLSPERLTFEITETTVVNQLSSASDLLGRIREQGCKVALDDFGSGFSSFSYLK 766 Query: 660 NVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGI 719 + D +KIDGSF+RN++ +S+D IV SI +A + VAEYVE + + G+ Sbjct: 767 HFPVDFIKIDGSFVRNLLHSSVDRTIVESINEVAHRLGVKTVAEYVEEHALIGVLEEAGV 826 Query: 720 DYMQGYLIGKPQPL 733 D++QGY IG+PQPL Sbjct: 827 DFVQGYAIGRPQPL 840 >UniRef50_B2J5P2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Nostocaceae RepID=B2J5P2_NOSP7 Length = 1224 Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 138/450 (30%), Positives = 223/450 (49%), Gaps = 52/450 (11%) Query: 317 TRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRDAPWSA--------LCYLRIPGMEMLV 368 T+ R + R++ A D + L N + R + A A LCYL + +++ Sbjct: 791 TQNRLLSRQLSWQATHDALTGLVNRQEFERRVEQALHVAKLDYQVYTLCYLDLDHFKIVN 850 Query: 369 KNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALD---SHL 425 G + + ++++ L + + + + G++ L L + +E + + S + Sbjct: 851 DTCGHVAGDELLRQITVLLQEKVRKTDTLARFGGDEFGLLLTQCTLEEALRVANNLLSCV 910 Query: 426 KQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVT------------- 472 ++FRF W IGVS V N L E+ + A+ + T Sbjct: 911 QEFRFVWQEQVFS--IGVSIGLVVIDTNSESL--AEIISTADAACYTAKNRGRNRVYVAQ 966 Query: 473 -NAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPI-----TGMRGDVYHE 526 + E +Q+RG M + R+ QALE + F L Q I T GD Y E Sbjct: 967 TDDQERLQQRGQM----------QWVGRISQALESDWFCLYVQRIAAIIPTDQNGDHY-E 1015 Query: 527 ILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQ---FMAENRAKMPAHRFAI 583 +LLR++ E +L+ P +F+P A + L ID WVI + + +N+ + +AI Sbjct: 1016 VLLRLRDEQGKLVLPMAFIPAAERYNLMHLIDRWVIRTLFKNWSRVVDNKQSI----YAI 1071 Query: 584 NLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQI 643 NLS +S+ RF + + + I + FE+TE+ A+ N+ +A+ +Q LQ +GC+ Sbjct: 1072 NLSGSSINDDRFIDFLHEQFTLHPISPQHICFEITETVAIANLLKARQFIQKLQRMGCRF 1131 Query: 644 AIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAE 703 A+DDFG G +S+A LK++ D LKIDGSFIRNIV N +D IV +I ++ + + +AE Sbjct: 1132 ALDDFGAGMSSFAYLKSLPIDYLKIDGSFIRNIVENPVDNAIVTAITRISSVMGIQTIAE 1191 Query: 704 YVENEEIREAVLSLGIDYMQGYLIGKPQPL 733 +VEN+ I E + +LGIDY QGY I P PL Sbjct: 1192 FVENDAILERITALGIDYAQGYGIAVPHPL 1221 >UniRef50_A4Y0K2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pseudomonas mendocina ymp RepID=A4Y0K2_PSEMY Length = 960 Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 132/443 (29%), Positives = 229/443 (51%), Gaps = 37/443 (8%) Query: 317 TRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRDA-------PWSALCYLRIPGMEMLVK 369 + +RA+ R+Q+LA D + L N R L R L + +S L +L + + + Sbjct: 513 SERRALEERLQQLAAHDALTGLLNRRELERLLSETLGGTAKRRFSHLLHLSLDRFKQVND 572 Query: 370 NYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRL---NTESHQERITALDSHLK 426 G Q ++L+ L L ++ ++ G++ A+ L + E+ ++ AL ++ Sbjct: 573 LCGHSAGDQLLRQLATQLGHQLPRHAELARVGGDEFAVLLREVDDEAALKQAEALRRAVE 632 Query: 427 QFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELS-------IVTNAPENMQ 479 QF F W G P + + + S V L ++ ++L+ + PE+ Sbjct: 633 QFVFTWQGRPFRLHTSIGLLALGSGVRDWETALTWASSASQLAKHQGRNRVCQFNPED-- 690 Query: 480 RRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRG---DVYHEILLRMKG-EN 535 GA+ E + ++ + RL++A E HF L QP+ ++ +++E+LLR + + Sbjct: 691 --GALL---EHQRQLQWITRLREACERGHFELFFQPVQALQSAASGLHYEVLLRYRDPAS 745 Query: 536 DELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAH-----RFAINLSPTSV 590 E +SP FL A + +ID WVI+H ++A N P H + +NLS +S+ Sbjct: 746 GEWVSPAQFLDAAARYDFLGAIDRWVIQHLCAWLAAN----PRHLAQLAQVNVNLSASSL 801 Query: 591 CQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGT 650 + F + Q L+++Q+ +L EVTE AL + + + L+ G ++A+DDFG+ Sbjct: 802 LDSAFHQLLEQELSRHQLPPGKLCIEVTEMVALGELGVSAQWIDELRSKGLKVALDDFGS 861 Query: 651 GYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEI 710 G+ASYA L+++ D+LKIDGSFI I S+ ++ +V S+ +A +L VAE+VE + Sbjct: 862 GFASYAYLRHLPLDILKIDGSFISGIESDPINQAMVGSMRQIASQLGLLTVAEFVETQAS 921 Query: 711 REAVLSLGIDYMQGYLIGKPQPL 733 + + LGIDY QGY +G+PQPL Sbjct: 922 LDCLRRLGIDYAQGYFVGRPQPL 944 >UniRef50_UPI0001C30E99 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C30E99 Length = 994 Score = 182 bits (463), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 127/433 (29%), Positives = 206/433 (47%), Gaps = 33/433 (7%) Query: 325 RIQRLAYVDPVVHLPNVRALNRAL--------RDAPWSALCYLRIPGMEMLVKNYGIMLR 376 ++Q +A DP+ L N R+ R L R A L I + + G + Sbjct: 560 QLQHMADHDPLTGLLNRRSFERELNQHIHRVERYGAEGAALVLDIDRFKHINDTLGHNVG 619 Query: 377 IQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLKQFRFFWDGMP 436 + K++ L L + + +L G++ A+ L QE +S L R Sbjct: 620 DELIVKVAQTLRSRLRDSDVLARLGGDEFAVLLPKGGQQEAEAVAESILASVR------- 672 Query: 437 MQPQIGVSYCYVRSPVNHIY--LLLGELNTVAELSIVTNA-------PENMQRRGAMYLQ 487 Q ++ R P+ L GE ++ ++ NA E + R A + Sbjct: 673 --AQSVLTTAGRRRPITTSVGIALFGETGGLSAEDVLVNADLAMYDAKEAGRDRAATFSS 730 Query: 488 RE-----LKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDV--YHEILLRMKGENDELIS 540 +E +K ++ R++ ALE + F L AQPI +R HE+LLRM E E+I Sbjct: 731 QERGASRMKARITWAERIRDALEEDRFTLYAQPIVELRSGAVRQHEVLLRMLDEQGEVIP 790 Query: 541 PDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVS 600 P +F+ VA F L ID WV+ ++ M + R F +N+S S + Sbjct: 791 PAAFIGVAERFDLMQEIDRWVVARAIKEMGQQRRAGRDLVFEVNISGASTGDPDLLTIIE 850 Query: 601 QLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKN 660 + L + +I+ L+ EVTE+ A+ N+ +AQ L ELGC+ A+DDFG G+ S+ LK+ Sbjct: 851 RELRENEIDPINLVLEVTETTAVANIPRAQEFAARLAELGCRFALDDFGAGFGSFYYLKH 910 Query: 661 VNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGID 720 + D+LKIDG F+R+ ++ D ++ + +AR +AEYV ++E E + +LG+D Sbjct: 911 LPFDILKIDGEFVRSCTTSQTDQLLIRAAVEIARGMGKETIAEYVGDDETVELLRTLGVD 970 Query: 721 YMQGYLIGKPQPL 733 Y QG+ +G+P PL Sbjct: 971 YAQGFHLGRPAPL 983 >UniRef50_B9ZMB9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZMB9_9GAMM Length = 817 Score = 182 bits (461), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 121/412 (29%), Positives = 220/412 (53%), Gaps = 18/412 (4%) Query: 342 RALNRALR-----DAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGED 396 R L+ ALR D P AL Y+ + +++ G ++L+ L + + Sbjct: 395 RRLDEALRTLEEGDTPH-ALFYMDLDQFKIINDTCGHQAGDALLRELADLLPAHIRDSDT 453 Query: 397 VYQLSGNDLALRLNTESHQERITALDSHL----KQFRFFWDGMPMQPQIGVSYCYVRSPV 452 + +L G++ L L ER A+ + L + RF W+G + + + P Sbjct: 454 LARLGGDEFGLLLR-HCPVERAEAIGNKLLATAQGLRFSWEGRRFDVGMSIGLVPIEGPG 512 Query: 453 NHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLM 512 ++ +L + ++ ++ + + + R ++ + RL+ ALE F Sbjct: 513 QNLPEVLSQADSACYVAKDLGRNRLYTWKPSDQILRRRHGEMEWVGRLRAALEEARFVAY 572 Query: 513 AQPITGMRG-DV---YHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQF 568 AQP+ + G D+ + EILLR+ GE+ LI+P +F+P A + L ID V+E + Sbjct: 573 AQPVKPLNGADLPLDHVEILLRLHGEDGTLITPGAFIPAAERYHLMPEIDRHVVELVFRQ 632 Query: 569 MAENRAKMPAHR---FAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTN 625 +A++R + P H +INLS S+ Q ++ +++++I+A Q+IFEVTE+ A+++ Sbjct: 633 LADHRDRNPHHAPVVVSINLSGQSLAQDGMLEFITSRMSQFRIQAQQIIFEVTETAAISH 692 Query: 626 VKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQI 685 +AQ ++ L+ +GC+ ++DDFG+G +S+ LKN+ D LK+DGSF+R+I +N++D + Sbjct: 693 HDRAQGLIRALRYMGCRFSLDDFGSGLSSFGYLKNLPVDFLKVDGSFVRDIATNAVDAAM 752 Query: 686 VASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTL 737 V +I + + + +AE VE+EE + +G+D++QGY + KP PL D L Sbjct: 753 VTAIHRVGHVLGLRTIAECVESEETMHHLREIGLDFVQGYHLAKPIPLTDHL 804 >UniRef50_B8GTY7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GTY7_THISH Length = 808 Score = 181 bits (460), Expect = 7e-44, Method: Compositional matrix adjust. Identities = 122/432 (28%), Positives = 217/432 (50%), Gaps = 25/432 (5%) Query: 317 TRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRDAPWSALCYLRIPGMEMLVKNYGIMLR 376 R A+ I R + D V AL A R + ALCY+ + +++ G + Sbjct: 380 ARHDALTGLINRREFEDRVRE-----ALESARRSSRSHALCYIDLDQFKVVNDTCGHVAG 434 Query: 377 IQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERIT---ALDSHLKQFRFFWD 433 + ++L+ L + + + +L G++ L L ++ L + + + RF W Sbjct: 435 DELLRQLAAALPRHIRDTDTLARLGGDEFGLLLENCPLDRALSICHQLLAEVAELRFMWQ 494 Query: 434 GMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQR----E 489 G + + + + +L E ++ ++ Q R +Y+ R Sbjct: 495 GRRFDVGMSIGLVAIDGASASLSEVLSEADSACYVA-------KEQGRNRVYVSRPGDQA 547 Query: 490 LKDKVAMM---NRLQQALEHNHFFLMAQPITGMRGD-VYH-EILLRMKGENDELISPDSF 544 LK + M R+++A+E F L QPI + G+ V H EILLR+K E+ L+ P +F Sbjct: 548 LKTRFGEMEWLGRIREAMEEERFELYCQPIRPISGEGVPHFEILLRLKAEDGSLVEPGAF 607 Query: 545 LPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRF-AINLSPTSVCQARFPVEVSQLL 603 +P A + L +D VI +A++ + H INLS S+ Q V++ L Sbjct: 608 IPAAERYNLMPQVDRHVIRSVFAMLADSDFALKQHAIVGINLSGQSLGQEDLLDFVTEAL 667 Query: 604 AKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNA 663 Y + A + FE+TE+ A+ N+ A ++ L+++GC A+DDFG+G +S+ LK++ Sbjct: 668 HYYGLPAHRFCFEITETAAIANLSSAAGFIRELRDMGCAFALDDFGSGLSSFNYLKHMPV 727 Query: 664 DLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQ 723 D LKIDGSF+++++++ +D +V +I + R+ + +AE+VE+E + E + +G+DY Q Sbjct: 728 DYLKIDGSFVQDVLTDPVDAAMVGAIHRIGRVLGVKTIAEFVESEAVLEHLREIGVDYAQ 787 Query: 724 GYLIGKPQPLID 735 GY IG+P+P D Sbjct: 788 GYGIGRPKPFRD 799 >UniRef50_Q15QF9 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15QF9_PSEA6 Length = 666 Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 120/419 (28%), Positives = 212/419 (50%), Gaps = 23/419 (5%) Query: 333 DPVVHLPNVRALNRALRDAPWSA-----LCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWL 387 DP+ L N RA R L + LC++ + + + G + K++ L Sbjct: 254 DPLTELQNRRAFERNLHEIMDDRRLSYFLCFIDLDYFKTINDTCGHAAGDEILVKVARIL 313 Query: 388 SPLLEPGEDVYQLSGNDLALRLNT---ESHQERITALDSHLKQFRFFWDG--MPMQPQIG 442 + + V +L G++ ++ + ++ + + +++ + W+G + IG Sbjct: 314 KANVRSNDIVARLGGDEFSILIKDCPFDNALQIANNIKENIRGLTYHWEGETFHLSASIG 373 Query: 443 VSYCYVRSPVNHIYLLLGELNTV-AELSIVTNAPENMQRRGAMYLQREL--KDKVAMMNR 499 V+ P H LN+ I NA N + + + + + +++ Sbjct: 374 VA------PKVHGSTTTELLNSADVACGIAKNAGRNTVHLYDVSNETGVNKRQDILSVHQ 427 Query: 500 LQQALEHNHFFLMAQ---PITGMRGDVYHEILLRMKGENDELISPDSFLPVAHEFGLSSS 556 + AL+++ F L Q P+ + D + E+LLRMKG +D +ISP F P+A + L+S Sbjct: 428 INNALKNDLFVLYRQDIIPLQHTQQDQHFEVLLRMKGPDDTIISPARFFPIAERYRLTSK 487 Query: 557 IDMWVIEHTLQFMAENRAKMPA-HRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIF 615 ID WVI A+N+ ++ + H +INLS S+ + + I A ++ F Sbjct: 488 IDRWVINALFTHYADNKKQLDSIHTISINLSGHSMNDRELEQFIMTKVKSGLIPATKICF 547 Query: 616 EVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRN 675 E+TE+ A+TNVK+A++ + +++ LGC A+DDFG+G+ SY ++ + + +KIDGSF+ Sbjct: 548 EITETVAITNVKRARLFMDNIKALGCSFALDDFGSGHTSYTYVRELPTEKIKIDGSFVSC 607 Query: 676 IVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLI 734 ++ N LDY V SIC +A+ K V+AE VE+++ EA+ LG+DY QGY P L+ Sbjct: 608 MMENPLDYTAVKSICDIAKAAKQDVIAECVEDKKTMEALKKLGVDYGQGYYFCHPYALV 666 >UniRef50_B4VZB0 Cyclic diguanylate phosphodiesterase (EAL) domain, putative n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4VZB0_9CYAN Length = 267 Score = 179 bits (455), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 103/261 (39%), Positives = 149/261 (57%), Gaps = 12/261 (4%) Query: 486 LQRELKDKVAMMNRLQQALEHNHFFLMAQPI----TGMRGDVYHEILLRMKGENDELISP 541 +Q+ L + LQ AL + F L QPI G G V+ EIL+RM G++ +I P Sbjct: 1 MQQNLCQESTSRQALQTALIEDRFCLYFQPIFPLLQGDEGHVHKEILIRMVGQDGRIIPP 60 Query: 542 DSFLPVAHEFGLSSSIDMWVIE-------HTLQFMAE-NRAKMPAHRFAINLSPTSVCQA 593 + FLP A E GL SID WV+E H + M R A NLS +SV Sbjct: 61 NYFLPCAEESGLMPSIDRWVLESFFNGIYHPSKCMGCWARDYYCGCIIAFNLSGSSVNDD 120 Query: 594 RFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYA 653 F + + + + L+FE+TE+ AL N+ + + +Q LQ LGCQ A+DDFGTG + Sbjct: 121 SFLDFLENAVINHPVPPSSLVFEITETVALINIDKTRQFIQRLQNLGCQFALDDFGTGMS 180 Query: 654 SYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREA 713 S A LK + D +KIDG F+R++V N + IV++I +A+ K++ +AEYVEN I E Sbjct: 181 SLAYLKELPLDFVKIDGMFVRDVVQNPISEAIVSAIVQMAKAKQIKTIAEYVENVAILER 240 Query: 714 VLSLGIDYMQGYLIGKPQPLI 734 + +LG+DY QG+ +GKP P++ Sbjct: 241 LQALGVDYAQGFYLGKPTPIL 261 >UniRef50_UPI0001C31434 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31434 Length = 769 Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 130/425 (30%), Positives = 211/425 (49%), Gaps = 24/425 (5%) Query: 329 LAYVDPVVHLPNVRALNRALR-----DAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKL 383 LA D + L N RA R L D A+ + + + + G + ++ Sbjct: 331 LADHDALTGLYNRRAFQRELEQRTSEDGRGGAVVVIDLDHFKDINDTLGHAAGDEVIVRV 390 Query: 384 SHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLKQFR----FFWDGMP--M 437 + L+ L + + +L G++ A L+ S +E + L+ R G P + Sbjct: 391 ARLLAKRLRKTDVLGRLGGDEFATLLSGVSREEAEAVIAELLRVVREQSVVVEGGHPIGL 450 Query: 438 QPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRE-----LKD 492 G++ +P++ LL+ A++++ +A E + R A+ ++ E + + Sbjct: 451 TASAGIALFEGDTPLSGEELLVS-----ADIAMY-DAKEAGRDRHAISVETEQRQAQMTE 504 Query: 493 KVAMMNRLQQALEHNHFFLMAQPITGMRGDV--YHEILLRMKGENDELISPDSFLPVAHE 550 ++A R++ ALEH+ F L QP+ +R + HE+LLRM+G++ ELI P +FLP+A Sbjct: 505 RMAWSQRMRDALEHDGFVLFQQPVVDLRTGLPKCHELLLRMRGDDGELIPPAAFLPIAER 564 Query: 551 FGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEA 610 GL + ID WV + +A A R A+NLS SV + LA Sbjct: 565 SGLIAEIDRWVTRRAIATIAAQEAAGRPLRLAVNLSGASVSDPGLLEIIEGDLAAMAPPP 624 Query: 611 WQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDG 670 L+FEVTE+ A+ N+ +A+ L ELGC++A+DDFG G+ S+ LK + D LKIDG Sbjct: 625 GSLVFEVTETAAIVNLDRARAFAATLAELGCELALDDFGAGFGSFYYLKRLPFDYLKIDG 684 Query: 671 SFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKP 730 FIR + S+ D +V +I +AR VAE+V +E E + L +D QG+ +G+P Sbjct: 685 DFIRQLTSSHEDQLVVRAIVEIARGLGKRTVAEFVGDEATLELLRELRVDDGQGFHLGRP 744 Query: 731 QPLID 735 PL D Sbjct: 745 APLED 749 >UniRef50_Q67NQ9 Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum RepID=Q67NQ9_SYMTH Length = 720 Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 129/438 (29%), Positives = 209/438 (47%), Gaps = 35/438 (7%) Query: 328 RLAYVDPVVHLPNVR--------ALNRALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQY 379 RLA VD + L N R A+ A R AL ++ + + + G + Sbjct: 293 RLAMVDSLTDLANRRRFQQELEEAVTEAERTGRSGALVFIDLDMFKHINDTLGHPAGDEV 352 Query: 380 KQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALD---SHLKQFRFFWDGMP 436 ++++ L + PG+ +L G++ AL L D + +++ RF P Sbjct: 353 LRQVATILRSAIRPGDTAARLGGDEFALVLRNADGARAAQVADRLLTAIRRARFGGAEAP 412 Query: 437 MQ----------PQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYL 486 + P+ G S VR +N + L E S PE Sbjct: 413 VSLTASMGVVLFPEHGRS---VRELMNRADMALLEAKEGGRDSWAPFTPEG-------RW 462 Query: 487 QRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSF 544 QRE++ ++ R+ +ALE + F L QPI +R + HE LLRM G+ ELI P F Sbjct: 463 QREMQAQLLWRQRISRALEEDRFVLHYQPILDLRRNAVTRHEALLRMVGDGGELIFPGEF 522 Query: 545 LPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLA 604 + VA F L +D WV+E ++ +AE + +NLS ++ P + + L Sbjct: 523 MAVAERFDLIQQVDRWVLERAVRELAELQRAGRRTVLEVNLSGRTLMDPVLPAVIRRGLT 582 Query: 605 KYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNAD 664 ++ L+ E+TE+ A+++V QA+ + ++ LGC++A+DD G G+AS LK + D Sbjct: 583 LRDVDPASLVLEITETAAISDVDQAERFIGEMKALGCRLALDDVGAGFASLYFLKRLPVD 642 Query: 665 LLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQG 724 +KIDG+FIRN+ ++ D +V ++ + R VAE+V++ + + V GIDY QG Sbjct: 643 YIKIDGAFIRNLPHDTADQHLVRALASVCRELGKQTVAEFVDSPKTLQVVREYGIDYAQG 702 Query: 725 YLIGKPQPLIDTLNEIEP 742 YLIG+P P + N EP Sbjct: 703 YLIGRPGPGV--YNTEEP 718 >UniRef50_B8GT56 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Chromatiales RepID=B8GT56_THISH Length = 958 Score = 179 bits (453), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 136/471 (28%), Positives = 234/471 (49%), Gaps = 41/471 (8%) Query: 297 ITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPN--------VRALNRAL 348 I + L+ ++ + V TRQ A R++ A D + L N +AL +A Sbjct: 493 IRDRNGLILGVVLVFHDVSKTRQMA--RQLSWQATHDALTGLFNRYEFEQRLAQALAQAR 550 Query: 349 RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALR 408 A+ Y+ + +++ G + ++L++ L + + + +L G++ + Sbjct: 551 DRLAHHAVLYMDLDQFKVVNDTCGHSAGDELLKQLAYLLMGKVRESDTLARLGGDEFGVL 610 Query: 409 LNT---ESHQERITALDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTV 465 L + +E L ++ FRF W G Q IG+S V ++ L L E+ + Sbjct: 611 LENCPLDKAREIAQELRQTVRDFRFSWKGKSFQ--IGISIGLVM--ISDGNLDLAEVLSA 666 Query: 466 AELSIVTNAPENMQRRGAMYLQRELKD------KVAMMNRLQQALEHNHFFLMAQPI--T 517 A+++ A +++ R E D ++ +NR+ AL H+ F L Q I T Sbjct: 667 ADMACY--AAKDLGRDRIHVYHAEDADLQRRHVEMQAINRITDALTHDRFVLYTQRIVAT 724 Query: 518 GM----RGDVYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAE-- 571 G G + EILLRM E +L+ P +F+P A + L +ID WVI MA+ Sbjct: 725 GAAGPDDGGEHMEILLRMVDEKGDLVPPGAFIPAAERYDLMPAIDRWVIRRFFSTMAQHI 784 Query: 572 --------NRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNAL 623 + +AIN+S S+ F V++ L ++I + FE+TE+ A+ Sbjct: 785 REECGVDGSGGSASGCLYAINISGASINDETFLGFVTEQLETHRIPPTAICFEITETAAI 844 Query: 624 TNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDY 683 N+ +A + L++ GC+ ++DDFGTG +S+ LKN+ D LKIDGS +++IVS+ +D Sbjct: 845 ANLTRAMNLINELRKRGCRFSLDDFGTGVSSFGYLKNLPVDYLKIDGSLVKDIVSDPIDR 904 Query: 684 QIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLI 734 +V +I + ++ + VAE+VEN+EI ++ LG+DY QGY I +P+PL+ Sbjct: 905 AMVDAINRIGQVMGIHTVAEFVENDEILASLRELGVDYAQGYGIDRPKPLL 955 >UniRef50_Q3J9L4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Nitrosococcus oceani RepID=Q3J9L4_NITOC Length = 811 Score = 179 bits (453), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 129/458 (28%), Positives = 232/458 (50%), Gaps = 28/458 (6%) Query: 297 ITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALR------- 349 I+S + V ++ + V T R + R+I A D + L N R L Sbjct: 356 ISSRTGEVLGVVLVFSDV--TEARHMTRQITHQATHDSLTGLVNRREFEHRLERVLATLK 413 Query: 350 -DAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALR 408 ++ ALCY + +++ G + + +++S L + + + +L G++ + Sbjct: 414 AESAEYALCYFDLDRFKVINDTCGHVAGDELLRQVSEVLRGQIRKRDTLARLGGDEFGVL 473 Query: 409 L---NTESHQERITALDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTV 465 L + + Q TA+ ++ F+F W+G + IGVS V P+ + + + Sbjct: 474 LEHCSLKQAQRVATAIHKAIEDFQFTWEGKSFR--IGVSIGLV--PITKASMGIAVVLKA 529 Query: 466 AELSIVTNAPENMQRRGAMYLQ--REL---KDKVAMMNRLQQALEHNHFFLMAQPITGM- 519 A+ + A + R +Y + +EL + +V M R+ +AL+ N+F + QPI + Sbjct: 530 ADTACYA-AKNKGRNRIHVYHETDKELASHRGEVQWMTRIHRALKENYFQVYFQPIIPLA 588 Query: 520 --RGDVYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMP 577 + + +E+ LR++ ++ P +FLP A + L+ ID W+I +T ++A+N P Sbjct: 589 TEKEEKCYEVFLRLEDGAGGVVLPGAFLPTAERYNLAVKIDRWMIANTFTWLAQN--PEP 646 Query: 578 AHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQ 637 INLS S+ F + + L K I + Q+ FE+TE+ A N+ ++ L+ Sbjct: 647 LRTCFINLSGHSLRNKTFLAFIIEQLEKTPIPSIQICFEITEAAATANLSCTIRFIKSLK 706 Query: 638 ELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKK 697 GC+ ++DDFG+ +S+A LKN+ D LKIDG F+++I+ + +D IV SI + ++ K Sbjct: 707 SHGCKFSLDDFGSSLSSFAYLKNLPVDFLKIDGLFVKDILDDPIDLAIVRSINEIGQIMK 766 Query: 698 MLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLID 735 +AE+VE EE+ E + +G++Y QGY I PQPL + Sbjct: 767 KQTIAEWVEKEEVLEKLREIGVNYAQGYWINPPQPLTE 804 >UniRef50_A6V917 Membrane protein, putative n=6 Tax=Pseudomonas aeruginosa RepID=A6V917_PSEA7 Length = 1105 Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 130/450 (28%), Positives = 219/450 (48%), Gaps = 29/450 (6%) Query: 317 TRQRAVVRRIQRLAYVDPVVHLPNV--------RALNRALRDAPWSALCYLRIPGMEMLV 368 T+ RA+ R + A D + L N RAL A A ALC++ + +++ Sbjct: 658 TKARAMQRELSYHASHDALTGLFNRTKFEEELRRALANAQERASQHALCFIDLDRFKVVN 717 Query: 369 KNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRL---NTESHQERITALDSHL 425 + G ++LS L+ + + +L G++ L L + +E + L + Sbjct: 718 DSAGHAAGDMLLRELSRILADRTRASDTLARLGGDEFGLLLFDCDLAVAEEVASKLIEQI 777 Query: 426 KQFRFFWDGM--PMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRR-- 481 RF W+G + IG++ S EL + A+++ R Sbjct: 778 CSVRFPWEGRVYDVGASIGITALTATSRSTS------ELMSQADVACYAAKHAGRNRVSV 831 Query: 482 ---GAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQ---PITGMR-GDVYHEILLRMKGE 534 G ++R+ +D + + + L++ALE++ F L AQ P+ R G ++E+LLR+ Sbjct: 832 YQFGHEEVERQHRD-ILLASGLREALENDRFQLQAQEIVPVVARRDGGRHYELLLRLYDP 890 Query: 535 NDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQAR 594 + ++ P +F+P A F L +SID WVI L A + INLS S+ Sbjct: 891 DGQMTPPGAFIPAAERFNLMASIDRWVINEALINFGPRIAAIDGLTIGINLSGNSLNDPL 950 Query: 595 FPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYAS 654 F + + + +L FE+TE+ + + A + L++LGC++A+DDFG+G +S Sbjct: 951 FLPYLLDRIEHSPLGPERLYFELTETALMNQLSVASRIVDKLRDLGCKVALDDFGSGLSS 1010 Query: 655 YARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAV 714 + LKN D +KIDGSF+RN+ + +D IV SI +A+ + VAE+VE+ EI + + Sbjct: 1011 FNYLKNFAVDAIKIDGSFVRNLDKSPVDQAIVDSINQIAQRLGAVTVAEFVESREILDHL 1070 Query: 715 LSLGIDYMQGYLIGKPQPLIDTLNEIEPIR 744 LG+DY QGY +G+PQP L ++ R Sbjct: 1071 ARLGVDYAQGYAVGRPQPFATVLEQLRGAR 1100 >UniRef50_B8GQU5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GQU5_THISH Length = 732 Score = 176 bits (446), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 131/450 (29%), Positives = 222/450 (49%), Gaps = 43/450 (9%) Query: 316 ATRQRAVVRRIQRLAYVDPVVHLPNVRAL----NRALRDA----PWSALCYLRIPGMEML 367 AT R++ ++Q D + L N R L +ALR A A+ Y+ + +++ Sbjct: 293 ATEYRSLSTQLQYQVTHDALTGLLNRRELLIRLEQALRQARNGHNNGAMLYIDLDQFKVI 352 Query: 368 VKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALD---SH 424 G + +++S L+ + G+ + +L G++ A+ LN E + D H Sbjct: 353 NDTSGHTAGDELLRQISSLLTGAIRQGDALARLGGDEFAVILNDCPASEIMDTADQLREH 412 Query: 425 LKQFRFFWDGMP--MQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRG 482 + F W+ + IGV P+N N + +S A + + +G Sbjct: 413 IADHVFRWEDKSYNVTASIGVV------PINR-----ESGNVITVMSAADTACHSAKDKG 461 Query: 483 AMYLQRELKDKVAMMNR---------LQQALEHNHFFLMAQPITGMRGDVYH-----EIL 528 + D +M+ R + QA++ F L AQ I + H E+L Sbjct: 462 RNRIHAFKLDDTSMIRRQGEMRWVARIHQAVQEGRFSLFAQTIQPVEAREKHRGTHLEML 521 Query: 529 LRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRF---AINL 585 ++M+GE DELI P FLP A + LS +ID WV++HT ++A+ A + +R AINL Sbjct: 522 IKMQGEGDELIPPGVFLPAAERYNLSGTIDRWVLQHTFSWIAD--AGLDENRLSLCAINL 579 Query: 586 SPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAI 645 S SV F V L ++ + A + FE+TE+ A+ N+ QA+ ++ L +GC+ A+ Sbjct: 580 SGHSVGDPAFLDYVVSQLKRHALPATLICFEITETVAIANLNQARTMMETLGGMGCRFAL 639 Query: 646 DDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYV 705 DDFG+G +S+ L+ + D LKIDG F+++I + D +V SI +A + +AE+V Sbjct: 640 DDFGSGMSSFGYLRTLPVDYLKIDGLFVKDIAKDPTDLALVRSINDIAHVMGKRTIAEFV 699 Query: 706 ENEEIREAVLSLGIDYMQGYLIGKPQPLID 735 E++EI + + +G+DY QG I +P P+ + Sbjct: 700 ESQEILDRLQEMGVDYAQGNFIAEPVPVAE 729 >UniRef50_Q15NX4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15NX4_PSEA6 Length = 918 Score = 176 bits (445), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 124/401 (30%), Positives = 204/401 (50%), Gaps = 36/401 (8%) Query: 351 APWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLN 410 AP S LC + + +++ + G + +++ LS L+ + + +L G++ AL L Sbjct: 532 AP-SYLCCIDVDNFKLVNDSLGHQIGDGVLTEVAEVLSHLVNSNDTLGRLGGDEFALLLV 590 Query: 411 TESHQERIT---ALDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAE 467 S +E + L + + F+W G Q IG+S V L +L+ V Sbjct: 591 DRSLEESTSLCKNLIQSVSEHAFYWGGR--QINIGISIGMV--------TLERDLSDVEL 640 Query: 468 LSIVTNAPENMQR--RGAMYLQRE-----LKDK--VAMMNRLQQALEHNHFFLMAQPITG 518 LS + + + RG ++ L+D+ + + + L+ F L+ QPI G Sbjct: 641 LSKAGLSRDKAKELGRGRLFFAEAGCTDMLRDQAHIGYIANISHDLKLGRFSLVKQPIVG 700 Query: 519 MRGDVYH----EILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTL----QFMA 570 ++ H EIL+R EN + +SP F+PVA + G+ S ID WV++ TL + Sbjct: 701 LKNTNQHILHYEILIRYHNENGQFVSPGVFIPVAEKHGVISLIDSWVVKTTLANYATYFP 760 Query: 571 ENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQ 630 E + +INLS SV F +V L+ +I + FE+TE+ ++ + QA Sbjct: 761 EGNVTV-----SINLSGVSVSNDDFSRQVINLIKTSRIAPQNICFEITETAVISRIGQAL 815 Query: 631 ITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASIC 690 + L+ +G + A+DDFG+G +S+ LK + D LKIDGS +++I + D IV S+ Sbjct: 816 DFIHELKAIGVKFALDDFGSGTSSFGYLKQIPVDYLKIDGSLVKDIHNQPTDRAIVESVH 875 Query: 691 HLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQ 731 ++A+M M VAE+VEN+EI + +GIDY QGY +GKPQ Sbjct: 876 NIAKMMGMKTVAEFVENDEICRVLQDIGIDYGQGYGLGKPQ 916 >UniRef50_Q8D5T3 FOG: EAL domain protein n=2 Tax=Vibrio vulnificus RepID=Q8D5T3_VIBVU Length = 725 Score = 175 bits (443), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 147/547 (26%), Positives = 250/547 (45%), Gaps = 40/547 (7%) Query: 212 TKKEFALWLLALGALLLLLCMPLNEKSTIFSTNYTLSLLLPLMMWGAMRYGYKLISLLWA 271 T + LWLL +L+ + + + F+ + +LL L++ G ++G + Sbjct: 197 TSPSYWLWLLCCFSLMAVAI----QHPSSFALYSSCFVLLVLVIVGFGKHGLVRPLFMGT 252 Query: 272 VVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVL-------ATRQRAVVR 324 + +++ + N + Y I + I+N + VL A + + + Sbjct: 253 LTILVMANDSLNRVNTY-------QILDEQFFGLLLILNVVTVLGYFVGGYAIKHYELAQ 305 Query: 325 RIQRLAYVDPVVHLPNVRALNRALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLS 384 + R +DP L N+ L L P + L YL + + G + Q ++ Sbjct: 306 QQIRAERIDPYTGLFNLSQLEEDLTTIPKAVLIYLDLSPTLSRLSELGHDGKAQLIGQIY 365 Query: 385 HWLSPLLEPGEDVYQ--LSGNDLALRLNTESHQERITALDSHLKQFRFFWDGMPMQPQIG 442 +++ + Y+ S L E + + + L F+F+W G + Sbjct: 366 QFVNRNQDENAKCYRPPFSTGVLGFIEGDERMKPFVAEMAQRLDNFQFYWRGTSISLVSP 425 Query: 443 VSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRR---GAMYLQRELKDKVAMMNR 499 +C V V H GE T + + N Q G + ++ DK+A + R Sbjct: 426 TLHCVV---VKH-----GEDLTDVVSHLCEHQGSNQQVNWIDGEAIAESQI-DKLAYIQR 476 Query: 500 LQQALEHNHFFLMAQPITGMRG----DVYHEILLRMKGENDELISPDSFLPVAHEFGLSS 555 + ++N F L Q + + E+L R+K D + P F P+ ++FGL Sbjct: 477 V---FKNNEFELYCQRYMKLADPSSQQLSFEVLTRVKTSQDSRLLPSEFFPLINQFGLEV 533 Query: 556 SIDMWVIEHTLQFMAEN-RAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLI 614 +D WV+E T + + E R + A+NL+ S+ A + + +YQ+ ++ Sbjct: 534 QLDQWVVEQTFRLLNEQVRNWCRVEKCAVNLTARSLAMAGLSTWIIEKAHQYQVPLDKIC 593 Query: 615 FEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIR 674 FEVTES+AL N +QA TL+ L+ GC+IA+DDFGTGYAS+A L+ + D++KIDG FI+ Sbjct: 594 FEVTESSALQNEEQAIETLKVLRAAGCKIALDDFGTGYASFAYLRRLPLDIVKIDGEFIK 653 Query: 675 NIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLI 734 ++ +N D IV SI ++A + VAE+VE+E+ E + I Y QG+ + KPQPL Sbjct: 654 DLPTNETDRLIVESISNVANDIGLETVAEFVESEQHIEMLKQWHITYAQGFGVYKPQPLA 713 Query: 735 DTLNEIE 741 L E E Sbjct: 714 QVLREFE 720 >UniRef50_A6FHQ7 PAS sensor diguanylate cyclase and phophodiesterase (Fragment) n=2 Tax=cellular organisms RepID=A6FHQ7_9GAMM Length = 950 Score = 174 bits (442), Expect = 8e-42, Method: Compositional matrix adjust. Identities = 132/494 (26%), Positives = 236/494 (47%), Gaps = 50/494 (10%) Query: 276 ISIHSYQNYIPIYPG-YTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDP 334 + + Y Y I+ G +L I + ++ VN T+++ +++ +A D Sbjct: 469 VEMSGYDRYGEIFHGEINMRLNIQADITVIDGSFVN-----TTKRKQHEIKLESIAKYDQ 523 Query: 335 VVHLPNVRALNRALRDAPWSA---------LCYLRIPGMEMLVKNYGIMLRIQYKQKLSH 385 + L N R+ L A A L YL + +++ G + +K++ Sbjct: 524 LTGLVN-RSHFEKLVGASLEANRSVLEDNILLYLDLDQFKLVNDICGHDVGDSLLKKITV 582 Query: 386 WLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDS---HLKQFRFFWDGMPMQPQIG 442 L L+ + +L G++ + LN + + D+ ++ FRF +G + Sbjct: 583 VLKSFLDESAILARLGGDEFGILLNHTNFDNALEVADTIRCGIEDFRFTHNGRHFVLGVS 642 Query: 443 VSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYL---------QRELKDK 493 + + + + L ++A+ + T A E + R +Y QRE++ Sbjct: 643 IGVVTLDESIENFSQAL----SLADTACFT-AKEQGRNRVHVYSKCNDVMLGHQREMR-- 695 Query: 494 VAMMNRLQQALEHNHFFLMAQPITGMRGDVY----HEILLRMKGENDELISPDSFLPVAH 549 + L++AL+ N F L Q I + + +EILLR++ E+ L SP F+ A Sbjct: 696 --WIGVLREALDENRFELAFQTIKPLSASIKEGYRYEILLRLRDEDGNLQSPSEFIAAAE 753 Query: 550 EFGLSSSIDMWVIEHTLQFMAENRAKMPAH-----RFAINLSPTSVCQARFPVEVSQLLA 604 + S +D WV++ Q+++ N P H +INL S+ + + Sbjct: 754 NYNFMSQLDRWVVKTYCQWLSSN----PKHLANLSSASINLCGQSLVDRSMHSYIENTIL 809 Query: 605 KYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNAD 664 Y I +L FE+TES A+ + Q + + + LGC+ ++DDFG+G++SY+ +K + D Sbjct: 810 TYGIPPEKLCFEITESQAIMDFDQTILFMNKFKALGCRFSLDDFGSGFSSYSYIKRLPID 869 Query: 665 LLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQG 724 LKIDGSF++NI ++++DY +V S +A+ + VAEYVENE I+ + +GIDY+QG Sbjct: 870 QLKIDGSFVKNIETDNVDYTMVKSFNEIAKAVNIKTVAEYVENENIKNILSGIGIDYVQG 929 Query: 725 YLIGKPQPLIDTLN 738 YLI KP L+D ++ Sbjct: 930 YLIAKPALLVDLVD 943 >UniRef50_A3ISZ5 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. CCY0110 RepID=A3ISZ5_9CHRO Length = 750 Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 125/444 (28%), Positives = 221/444 (49%), Gaps = 30/444 (6%) Query: 317 TRQRAVVRRIQRLAYVDPVVHLPNVRA----LNRALRDAPWSA----LCYLRIPGMEMLV 368 T+ R + R+I A D + L N R+ L+RA+ +A LCYL + +++ Sbjct: 307 TKPRQLARKIAWQANHDGLTKLMNRRSFEEQLDRAILEARTHQNSHILCYLDLDQFKVVN 366 Query: 369 KNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNT---ESHQERITALDSHL 425 G + + ++L+ + + + + +L G++ + L+ ++ ++ L + Sbjct: 367 DTCGHIAGDELLRQLAELFNHQVRTSDKIARLGGDEFGILLHQCPLQAGKQIADKLRKLI 426 Query: 426 KQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMY 485 + FRF WD IG S V +N L +LN++ + R ++ Sbjct: 427 EDFRFTWDDKTFA--IGASIGLVE--INEDTL---DLNSLLSAADAACYAAKDNGRNRLH 479 Query: 486 LQRELKDKVAMMNRLQQ-------ALEHNHFFLMAQPIT----GMRGDVYH-EILLRMKG 533 + + +VA +Q ALE N F L Q I +G H E+L+RM Sbjct: 480 IYQADDHEVAKQREERQWISKIHLALEENRFCLYQQKIIPVNPSKKGQNNHNELLIRMID 539 Query: 534 ENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQA 593 +++ P +F+P A + L +D WV+ H ++ + + INLS +S+ Sbjct: 540 REGKIVPPMAFIPAAERYDLMPVLDRWVVSHFFKYYSTLTNSQKQEIYTINLSGSSLTSE 599 Query: 594 RFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYA 653 +F + Q L ++ I L FE+TE+ A+ N+ +A ++ L+++GC A+DDFG+G + Sbjct: 600 QFLNFLKQQLKEHPISPETLCFEITETTAIANLSKAITFIRELKKIGCHFALDDFGSGMS 659 Query: 654 SYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREA 713 S+ LKN+ D LKIDGSFI++I+ + +D ++V I + + + +AE+VE+ EI + Sbjct: 660 SFGYLKNLPIDYLKIDGSFIKDILKDPIDCEMVECINRVGHVMGIQTIAEFVESNEILQK 719 Query: 714 VLSLGIDYMQGYLIGKPQPLIDTL 737 + + IDY QGY I KP PL D+L Sbjct: 720 LQKMNIDYAQGYGIAKPCPLFDSL 743 >UniRef50_A8FQD1 Sensory box protein n=15 Tax=Shewanella RepID=A8FQD1_SHESH Length = 870 Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 122/437 (27%), Positives = 216/437 (49%), Gaps = 30/437 (6%) Query: 317 TRQRAVVRRIQRLAYVDPVVHLPNVRALNRALR----DAPWSALCYLRIPGMEMLVKNYG 372 TR+ + R++++ A D + L N RA L DA A+CY + +++ + G Sbjct: 419 TREELLKRQLRQKANFDSITSLLNRRAFEERLEKFSHDAQSIAICYFDLEQFKLINDSCG 478 Query: 373 IMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRL---NTESHQERITALDSHLKQFR 429 ++ + L E + +L G++ L + N + + + S + Sbjct: 479 HSAGDTMLAMVAKAMQSCLSKDEMLARLGGDEFGLAIRDHNASEVAQLVKRIVSSVSMQV 538 Query: 430 FFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGA---MYL 486 +G + + R+P Y+ EL A+++ + +R+G+ + Sbjct: 539 LRDNGCHYKVGVSAGVAIARAP----YISPKELIKDADVACIA-----AKRKGSNQVHFY 589 Query: 487 QRELKDKVAMMN------RLQQALEHNHFFLMAQPITGMRGDVYH----EILLRMKGEND 536 K+ + N R+ QA+EHN L QPI GM G H EILLR++ Sbjct: 590 DDNDKESIYQRNAPMWAVRIGQAIEHNELLLYYQPIKGM-GPGEHKQRMEILLRIQEPCG 648 Query: 537 ELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFP 596 ++SP F+ A F L + +D VI +++ + H +INLS S+ Sbjct: 649 RILSPAQFIEAAERFKLMNDVDKEVIRKAFLWLSLHEEIWDDHCISINLSGNSLGAEGMV 708 Query: 597 VEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYA 656 +++ +++I + + FE+TE++A+ N +A L +L++LG A+DDFGTG+ASY Sbjct: 709 EYIAEQFKRFEIPSKCICFEITETSAIQNRNRAMDMLNYLRKLGFSFALDDFGTGFASYG 768 Query: 657 RLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLS 716 LK + D +KIDG F++++ +N+ D+ IV SI + + + VAE+VEN++I + + Sbjct: 769 YLKELPVDYVKIDGCFVKSLATNAKDFAIVKSIHDVCDVMGIETVAEFVENQDIIDRLED 828 Query: 717 LGIDYMQGYLIGKPQPL 733 +GI+Y QGY IG+P+PL Sbjct: 829 IGINYAQGYAIGRPKPL 845 >UniRef50_B9ZQM9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZQM9_9GAMM Length = 792 Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 120/454 (26%), Positives = 222/454 (48%), Gaps = 44/454 (9%) Query: 317 TRQRAVVRRIQRLAYVDPVVHLPNVRALNR--------ALRDAPWSALCYLRIPGMEMLV 368 TR R++ R + A D + LPN R A R+ +L YL + +++ Sbjct: 343 TRSRSLERDLIWAARHDELTGLPNRAEFERRLRKMVIHARRNGIDHSLIYLDLDQFKVVN 402 Query: 369 KNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLN------TESHQERITALD 422 G + ++L+ L + + +L G++ + L E+ E+I A Sbjct: 403 DTCGHPAGDELLRQLATQFQERLRSSDVLARLGGDEFGILLERCTLGEAEAIAEKIRA-- 460 Query: 423 SHLKQFRFFWDG-----------MPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIV 471 + + RF W G P+ P G + ++ YL + + + Sbjct: 461 -SVAEGRFEWQGKVFTVGVSIGVAPIDPDTGDAEQFMSKADAACYL--AKEAGRNRIHVT 517 Query: 472 TNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQ---PITGMRGDVYHEIL 528 + EN+ Y + D + + + +A+E + +L Q P++G +G Y E+L Sbjct: 518 HSGDENV-----AYCE----DHMHCVQAISEAIEADRLWLHGQNICPVSG-KGKGYTEVL 567 Query: 529 LRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPT 588 +R+ + EL+SP +F+P A FG+ ID WVI L MA N R+++NLS Sbjct: 568 VRVLDQKGELLSPGTFIPAAERFGIMPQIDRWVIRRVLTHMA-NPGSGFKGRYSVNLSGQ 626 Query: 589 SVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDF 648 S+C ++++ +++ ++ FE+TE+ A+ N+ QA ++ L+ LGC+ A+DDF Sbjct: 627 SLCDIEMLDFITKIFRHTRVDPSRICFEITETAAIANLDQASRFMKELRGLGCRFALDDF 686 Query: 649 GTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENE 708 G G +S+ L+++ D +KIDGSF+R++ + + + +V SI H+ + + VAE+V + Sbjct: 687 GVGMSSFGYLRDLKVDYIKIDGSFVRDMAEDPIHHAMVESIHHIGHVMGLETVAEFVSDP 746 Query: 709 EIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEP 742 + ++ +GIDY QG+ + +P+PL + E +P Sbjct: 747 RLLVSLREIGIDYGQGFGLHRPEPLEPSPMEAKP 780 >UniRef50_C5BR51 PAS sensor diguanylate cyclase and phophodiesterase n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BR51_TERTT Length = 728 Score = 172 bits (437), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 91/246 (36%), Positives = 152/246 (61%), Gaps = 13/246 (5%) Query: 497 MNRLQQALEHNHFFLMAQPITGMR----GDVYHEILLRMKGENDELISPDSFLPVAHEFG 552 ++RLQ AL + F L QPI +R G +++E+L+R ++ +PD+FLP A FG Sbjct: 470 VSRLQTALMRDRFELYFQPICDLRHRHSGYIHYEVLIRYVDDDGTHRTPDNFLPAAERFG 529 Query: 553 LSSSIDMWVIEHTLQFMAENRAKMPAHRFA-----INLSPTSVCQARFPVEVSQLLAKYQ 607 L++ ID+WV+ TL ++ + PAH A INLS S+ + + QL+ Q Sbjct: 530 LTNQIDLWVLTTTLDYLD----RHPAHTRALSCCSINLSAHSLASHQSRSAIKQLVMTAQ 585 Query: 608 IEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLK 667 +L FE+TE+NA+ N+++A + L+ LGC+ A+DDFGTG++S+ L+N++ D +K Sbjct: 586 FPKNKLCFEITETNAIHNLQEAVEFVNDLKILGCRFALDDFGTGFSSFGYLQNLDVDYIK 645 Query: 668 IDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLI 727 IDGSFIR+I++N + +V ++ + R + +AEYVE++EI ++ + + Y QG+ + Sbjct: 646 IDGSFIRDIINNEVGRAMVKAMNAIGRELNIGTIAEYVESDEIIAELIHMDVAYGQGFAL 705 Query: 728 GKPQPL 733 KP P+ Sbjct: 706 AKPMPV 711 >UniRef50_C0N6D2 Putative uncharacterized protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N6D2_9GAMM Length = 1203 Score = 172 bits (436), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 114/402 (28%), Positives = 206/402 (51%), Gaps = 29/402 (7%) Query: 355 ALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESH 414 ALC+L + +++ G + + +++ L + + + +L G++ A+ + S Sbjct: 810 ALCFLDLDQFKLVNDTCGHIAGDELLRQIGSLLQSNVRSRDTIARLGGDEFAVLMEHCSI 869 Query: 415 QERITALDS---HLKQFRFFWDG--MPMQPQIGVSYC--YVRSP---VNHIYLLLGELNT 464 A + L+ FRF W + IG++ + R + H+ Sbjct: 870 DRAYKACEQILQLLQDFRFHWQDYTFTVGGSIGLAIIDQHTRDSNEALKHVDTACYSAKD 929 Query: 465 VAELSIVTNAPENM---QRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGM-- 519 + + +++ QRRG ++ E+ D AL+ + F L AQPI + Sbjct: 930 AGRNRVEVHREDSLRLKQRRGEIHWSTEIND----------ALDDDRFLLYAQPIQPVMN 979 Query: 520 --RGDVYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKM- 576 RG Y E+L+RM ++ E+ P +FLP A + + ID WV+ HT ++ +N AK+ Sbjct: 980 PERGMSY-EVLVRMLRKDGEISPPGAFLPAAERYNSINRIDRWVVSHTFDWLNKNAAKLN 1038 Query: 577 PAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHL 636 +INLS S+ + + L +I A ++ FE+TE+ A+ N++ A ++ L Sbjct: 1039 KVATVSINLSGLSMGDESMLTFIIEQLETAKIPAEKIKFEITETAAIANLRAATKFIETL 1098 Query: 637 QELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMK 696 +E G ++DDFG+G +S+A LK + D LKIDG F+++++ + LD+++V SI + + Sbjct: 1099 RESGIHFSLDDFGSGLSSFAYLKKLKVDSLKIDGMFVKDMLIDPLDFEMVKSINEIGHVM 1158 Query: 697 KMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLN 738 + +AE+VE+E I + +G+D++QGY IGKP P+ D LN Sbjct: 1159 GLETIAEFVESEAILAKLSEIGVDFVQGYAIGKPAPIDDILN 1200 >UniRef50_Q0KDS7 Predicted signal transduction protein containinga membrane domain, an EAL and a GGDEF domain n=4 Tax=Cupriavidus RepID=Q0KDS7_RALEH Length = 1132 Score = 172 bits (436), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 124/439 (28%), Positives = 214/439 (48%), Gaps = 31/439 (7%) Query: 317 TRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRDA--------PWSALCYLRIPGMEMLV 368 T RA+ R + R A D + LPN + LR+A +ALC++ + +++ Sbjct: 677 TTARALQRELARSAMHDALTGLPNRTWFEKRLREACDAARLHGHRAALCFIDLDRFKIVN 736 Query: 369 KNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLN--TESHQERIT-ALDSHL 425 G ++L + + + P + + +L G++ AL L T E++ + + Sbjct: 737 DTAGHGAGDVLLRELGYMIRNHVRPDDVLARLGGDEFALLLKDCTVDQAEQVCQGVIDAI 796 Query: 426 KQFRFFWDGM--PMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQR--- 480 + RF W+G M IG++ + P + EL + A+++ R Sbjct: 797 RGRRFPWEGRVYDMGASIGIAAIDLDVPP------VSELMSRADVACYAAKAAGRSRVSV 850 Query: 481 -RGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--------VYHEILLRM 531 R R ++ + + ALE N F L AQ I ++ + + EIL+RM Sbjct: 851 YRRDESDARRHHRELEVAAGIHSALEANRFRLFAQEIRALQPEENEDGAEHCHIEILVRM 910 Query: 532 KGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVC 591 E+ +LI P +F+P A + L +D WVI + L+ E +P +INLS S+ Sbjct: 911 VDEHGDLIMPGAFIPAAERYDLMGHVDRWVIRNVLRGYGERLGAVPGLSVSINLSANSLG 970 Query: 592 QARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTG 651 + + L + A ++ E+TE+ + N+ A + ++ GC +++DDFG+G Sbjct: 971 EPFLLPFLHAELEASALPASRIRLEITETALINNMAAANRLVTEMRRAGCTVSLDDFGSG 1030 Query: 652 YASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIR 711 +S+A LK D LKIDGSFIR + N++D +IV+SI + + VAE+VE+E Sbjct: 1031 LSSFAYLKQFPVDFLKIDGSFIRQLADNAVDREIVSSINDIGHRLGVRTVAEWVEDERTL 1090 Query: 712 EAVLSLGIDYMQGYLIGKP 730 +A+ ++G+DY QGY+IG+P Sbjct: 1091 DALRAIGVDYAQGYVIGRP 1109 >UniRef50_Q88M14 Sensory box protein/GGDEF family protein n=23 Tax=Proteobacteria RepID=Q88M14_PSEPK Length = 973 Score = 172 bits (435), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 129/467 (27%), Positives = 222/467 (47%), Gaps = 31/467 (6%) Query: 290 GYTTQLTITSSSYLVFSFIVNYMAVLA--TRQRAVVRRIQRLAYVDPVVHLPNVR----- 342 G T + + S L + + VL T++R + + A D + L N R Sbjct: 487 GSTVSINLVGSPILNDGQVSGIVLVLHDMTQERQYIANLSWQATHDALTGLANRREFEYR 546 Query: 343 ---ALNRALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQ 399 ALN R A +L +L + +++ G + + + L L G+ + + Sbjct: 547 LEQALNDLARQAGRHSLMFLDLDQFKLVNDTCGHAAGDELLRHICAVLQSGLREGDTLAR 606 Query: 400 LSGNDLALRLNT--ESHQERITA-LDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIY 456 L G++ + L ERI L ++ F W G P + + ++ + Sbjct: 607 LGGDEFGVLLENCPPDQAERIGEQLRQMVQSLHFVWKGRPFVTTVSIGLVHMAQAPGTLE 666 Query: 457 LLLGELNTVAELSIVTNAPENMQRRGAMYLQRELK-----DKVAMMNRLQQALEHNHFFL 511 L + + A E + R +Y + + ++A + RL ALE N F L Sbjct: 667 ASLRAADMACYM-----AKEKGRNRVQVYHADDSELSMRFGEMAWIQRLHVALEENRFCL 721 Query: 512 MAQ---PITGMRGDVYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTL-- 566 AQ P+ G + EILLR+ E+ I P SF+P A +GL +++D WV+ + Sbjct: 722 YAQEIAPLKTFEGPGHIEILLRLHDESGRTILPSSFIPAAERYGLMTALDRWVVRNVFMV 781 Query: 567 --QFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALT 624 + + E R + P AINLS +S+ +F + +L +Y I + FE+TE++A+ Sbjct: 782 IRKCLEEGR-EGPLSTCAINLSGSSIGDDKFLEYLQRLFVEYAIPPRMICFEITETSAIA 840 Query: 625 NVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQ 684 N+ A + L+ LGC+ ++DDF G +S+A LK++ D LKIDGSF+++++ + ++ Sbjct: 841 NLGSAIRFINELKGLGCRFSLDDFCAGMSSFAYLKHLPVDYLKIDGSFVKDMLDDPVNRA 900 Query: 685 IVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQ 731 +V I H+ + +AE+VE I +A+ +G+DY QGYLI +PQ Sbjct: 901 MVEVINHIGHVMGKRTIAEFVETPLIEQALQEIGVDYAQGYLIERPQ 947 >UniRef50_C0N942 Cyclic diguanylate phosphodiesterase domain protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N942_9GAMM Length = 945 Score = 171 bits (434), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 134/411 (32%), Positives = 212/411 (51%), Gaps = 35/411 (8%) Query: 342 RALNRALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLS 401 + LN+A R L +L + + + + G + Q Q+++ L + + V +L Sbjct: 540 KLLNQAQRYKREGMLLFLDLDQFKDINDSCGHNVGDQLLQRVAQSLLAISRSTDIVARLG 599 Query: 402 GNDLALRL-NTESHQ-----ERITALDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHI 455 G++ A+ L T+ H E+IT DS LK F + + I S + P+N++ Sbjct: 600 GDEFAIILPETDLHGAITLCEKIT--DS-LKNIDFSHE--QARYTISCSIGITKFPLNNL 654 Query: 456 YLLLGELNTVAELSIVTNAPENM-----QRRGAMYL-------QRELKDKVAMMNRLQQA 503 TV EL V+NA M + + +L + ELK +V ++ A Sbjct: 655 --------TVDEL--VSNADMAMYQAKSKGKNTWHLFTFDDMARTELKARVKWKQKIVDA 704 Query: 504 LEHNHFFLMAQPITGMRGDV--YHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWV 561 L HN F L QPI ++ ++E LLRM +ND+L P F+ VA + GL ID +V Sbjct: 705 LNHNRFQLFYQPIMHIQSRTVSHYEALLRMWDDNDQLHLPGLFIQVAEQTGLIHRIDHYV 764 Query: 562 IEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESN 621 +E + +AE + ++NLS +V + L+ +Y +A +LIFE+TE+ Sbjct: 765 LEQGVAKIAEQNLQHQDISLSLNLSGHAVVDPELQPLLEHLITQYGAQADKLIFELTETA 824 Query: 622 ALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSL 681 A+ ++ QA+ +Q L LGC+ +IDDFGTG+AS+ L+ + L+KIDGSFI +I N Sbjct: 825 AVADIPQARELMQELIRLGCRFSIDDFGTGFASFRYLRELPVSLVKIDGSFITHITENED 884 Query: 682 DYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQP 732 D V ++ +A+ +AE+VEN E + +LG+DY QGY IGKPQP Sbjct: 885 DRLFVQALVTIAKGMGKQTIAEFVENAETLALLETLGVDYAQGYYIGKPQP 935 >UniRef50_B0C721 EAL domain protein n=5 Tax=Acaryochloris marina MBIC11017 RepID=B0C721_ACAM1 Length = 608 Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 89/245 (36%), Positives = 145/245 (59%), Gaps = 4/245 (1%) Query: 497 MNRLQQALEHNHFFLMAQPITGMRGDVYH---EILLRMKGENDELISPDSFLPVAHEFGL 553 ++RL+ ALEHN F L AQPI ++ + EILLR+ + + SP F PVA ++ Sbjct: 350 VSRLRDALEHNQFELYAQPIQALQANTSEPCFEILLRLCDQPGIVCSPGMFFPVAEQYDF 409 Query: 554 SSSIDMWVIEHTLQFMAE-NRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQ 612 ID WVI+H + E N + F +NLS + +++ LA++ + Q Sbjct: 410 MPRIDRWVIKHLFADLGEINSLMLQEAIFFVNLSGATFKNMEIASFIAEQLARHNLRPEQ 469 Query: 613 LIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSF 672 FEV+E+ AL N++ A + L+++GC++A+DDFG+G +S+ LK + AD +KIDGSF Sbjct: 470 FCFEVSETVALKNIEAAAQLTKALKDMGCKVALDDFGSGLSSFTHLKKIPADFVKIDGSF 529 Query: 673 IRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQP 732 IR +V + + +V +I H++++ + +AEYVE+ I + + ID+ QG+ G +P Sbjct: 530 IRGVVDDDMSKGVVEAIHHVSKIMGLQTIAEYVESRAILDLLNDFHIDFAQGHYFGPARP 589 Query: 733 LIDTL 737 L+DTL Sbjct: 590 LVDTL 594 >UniRef50_B5JU45 PAS sensor diguanylate cyclase and phophodiesterase n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JU45_9GAMM Length = 787 Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 119/441 (26%), Positives = 206/441 (46%), Gaps = 34/441 (7%) Query: 317 TRQRAVVRRIQRLAYVDPVVHLPNVRALNRALR-------DAPWSALCYLRIPGMEMLVK 369 T +R + +++ A DP+ L N L+ D LC + I +++ Sbjct: 341 TVERELTTQLRYQATHDPLSDLLNRHEFEHQLQQLVSQPIDKQHHVLCTIDINQFKVIND 400 Query: 370 NYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRL---NTESHQERITALDSHLK 426 G + ++ + + + +L G++ + + NTE RI L + Sbjct: 401 TCGHNAGDELIRQFADLIRDDALERDITGRLGGDEFGILIIGTNTEDAVARIKKLRERIS 460 Query: 427 QFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELS-------IVTNAPEN-- 477 F F W+ + + + +++ L+ + + + + I P++ Sbjct: 461 DFHFNWEDKSFSISVAIGVVEIDGNTDYLADLMNDADAARQAAKEKGRNRIHVYQPDDHE 520 Query: 478 -MQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQ---PITGMRGDVYHEILLRMKG 533 M+RRG M A +N A+ N F L Q P+ ++EILLR Sbjct: 521 LMRRRGEMRW-------AAYLN---GAIADNRFLLTRQTILPLQEHEKGQHYEILLRCLD 570 Query: 534 ENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPA-HRFAINLSPTSVCQ 592 E+ ++ S FL A + L S ID WV+ H + + M A H +INLS S+ Sbjct: 571 ESGKISSAGDFLNAAERYNLISEIDRWVVRHLVTWFESTPTAMEATHTVSINLSARSIID 630 Query: 593 ARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGY 652 +RF ++ +++ + A ++ FE+TE+ A+ N QA+ + ++ LGC A+DDFG G Sbjct: 631 SRFTQDLREMMLRMPGLAKKVCFEITETAAIANFNQAKSFIVAMRALGCSFALDDFGKGM 690 Query: 653 ASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIRE 712 +S + LK + D LKIDG F+R+++S+ +D +V I +A M M +AEY EN EI + Sbjct: 691 SSLSYLKQLPVDYLKIDGDFVRDLLSDPIDRAMVEHINQIAHMIGMKTIAEYAENHEIIQ 750 Query: 713 AVLSLGIDYMQGYLIGKPQPL 733 + +G+DY QGY I +P P+ Sbjct: 751 VLREIGVDYAQGYGIDRPHPI 771 >UniRef50_B9YZ47 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9YZ47_9NEIS Length = 953 Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 125/452 (27%), Positives = 218/452 (48%), Gaps = 38/452 (8%) Query: 317 TRQRAVVRRIQRLAYVDPVVHLPN--------VRALNRALRDAPWSALCYLRIPGMEMLV 368 TR+R + + A D + L N R L + + L YL + +++ Sbjct: 490 TRERLYIESLSWQASHDALTGLTNRHEFERRLTRLLEATVGRQQYHVLMYLDLDQFKVVN 549 Query: 369 KNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNT--------ESHQERITA 420 G + +++ LS L G+ + +L G++ + L + + R T Sbjct: 550 DTCGHAAGDELLRQVCVLLSQQLREGDTLARLGGDEFGVLLQNCPPEAALPVAEKLRQTV 609 Query: 421 LDSHLKQFRFFWDGMP--MQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENM 478 D H F W+G P + IGV + ++ + L E+ A+++ A E Sbjct: 610 CDLH-----FSWNGQPFAISASIGVVH------ISGVPTTLKEVMRAADVACYM-AKEKG 657 Query: 479 QRRGAMYLQRELK-----DKVAMMNRLQQALEHNHFFLMAQ---PITGMRGDVYHEILLR 530 + R +Y + + ++ + RL +ALE + F L AQ P+ + E+LLR Sbjct: 658 RNRAQLYAADDAELTVRYGEMEWVQRLHRALEDDRFRLYAQTIAPLGEGSAAPHFELLLR 717 Query: 531 MKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSV 590 + E L+ P +F+P A + L ++ID WV+ L +A + AINLS S+ Sbjct: 718 LLDEYGMLVPPSAFIPAAERYNLMATIDRWVVSTALAMLAARTSPGSEWTCAINLSGASL 777 Query: 591 CQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGT 650 C F + LA I+ L FEVTE++A+ N+ A ++ L++LGC+ ++DDFG Sbjct: 778 CDDDFLGFLRAELAGSGIDPAHLCFEVTETSAIANLACATEFMRELRQLGCRFSLDDFGA 837 Query: 651 GYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEI 710 G +S+ LK++ D LKIDG F+++++ + +D+ +V I H+ + +AE+ E+ I Sbjct: 838 GMSSFGYLKHLPVDFLKIDGGFVKDMLDDPVDHAMVEVINHIGHVMGKQTIAEFAEHPGI 897 Query: 711 REAVLSLGIDYMQGYLIGKPQPLIDTLNEIEP 742 EA+ +G+DY QGY + +P PL + L + P Sbjct: 898 LEALKRMGVDYAQGYGVARPLPLAEVLAQHFP 929 >UniRef50_B8GSV3 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain n=2 Tax=Thioalkalivibrio RepID=B8GSV3_THISH Length = 806 Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 120/440 (27%), Positives = 221/440 (50%), Gaps = 34/440 (7%) Query: 317 TRQRAVVRRIQRLAYVDPVVHLPNVRALNR--------ALRDAPWSALCYLRIPGMEMLV 368 T+ R + R++ A D + L N R A ++ A+ ++ + +++ Sbjct: 356 TQAREMARKLSWAATHDSLTGLVNRAEFERRLDLLVTTARQEGRGHAVLFMDLDQFKLVN 415 Query: 369 KNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNT---ESHQERITALDSHL 425 G + ++L+ L L + + +L G++ + L E + L + + Sbjct: 416 DTCGHAAGDELLRQLTRRLQGQLRDNDTLARLGGDEFGVLLEGCPMERAGQIAETLRATV 475 Query: 426 KQFRFFWDGMPMQPQI-GVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQR---- 480 +FRF W Q +I V C +P++ + L + A+ + + R Sbjct: 476 AEFRFQW-----QEKIYTVGVCIGVAPIDEHIKSVASLMSDADAACYLAKEQGRNRIHII 530 Query: 481 -RGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDV--YHEILLRMKGENDE 537 G L R + +++ + R+ +ALE + F L Q I + G+ + E+L+RM E+ Sbjct: 531 QHGDQALSRR-QGEMSWVQRINEALERDRFCLYHQHIVPVSGNEPPHTEVLVRMLDEDGA 589 Query: 538 LISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHR----FAINLSPTSVCQA 593 +I+P +F+P A +GL +ID WVI L N ++P R +AINLS S+C Sbjct: 590 IIAPMAFIPAAERYGLMPAIDRWVIARVL-----NHLRIPGPRPHGLYAINLSGQSLCDN 644 Query: 594 RFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYA 653 + + +LA+ +E ++ FE+TE+ A+ N+ QA+ + L+ LGC+ A+DDFGTG + Sbjct: 645 QMLDFILDMLARTGVEPGRVCFEITETTAIANLTQAERFMSALRNLGCRFALDDFGTGMS 704 Query: 654 SYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREA 713 S+ LK + D LKIDGSF+R++ + ++ +V SI H+ + + +AE V +E + + Sbjct: 705 SFGYLKQLKVDFLKIDGSFVRDMNEDPINRAMVESINHIGHIMGIQTIAECVAHEAVMDH 764 Query: 714 VLSLGIDYMQGYLIGKPQPL 733 + ++G++Y QG+ + P PL Sbjct: 765 LKAIGVNYGQGFGLHMPAPL 784 >UniRef50_C8VWV7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VWV7_DESAS Length = 1021 Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 89/235 (37%), Positives = 146/235 (62%), Gaps = 6/235 (2%) Query: 500 LQQALEHNHFFLMAQPITGM-RGDVYH-EILLRMKGENDELISPDSFLPVAHEFGLSSSI 557 ++QAL + F QP+ + G + H E L R+ G+N E+I P F+PVA +GL I Sbjct: 783 IKQALREDKFISYYQPVVKIDNGTIAHYEALTRLIGKNREIILPGIFIPVAERYGLMPQI 842 Query: 558 DMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEV 617 D WV+ ++L + +N P + IN+S S+ Q + + + +I+ +L FE+ Sbjct: 843 DQWVVRNSLAALVQN----PEIKIFINISGMSLGQDTLLESIEKQIRDSKIDPLRLGFEI 898 Query: 618 TESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIV 677 TE+ A+ ++ +A+ ++ L++LGCQ A+DDFG G++S++ L+ + D++KIDGSFIR+I Sbjct: 899 TETTAIKDLPRAERWIRRLKKLGCQFALDDFGMGFSSFSYLRVLPVDIIKIDGSFIRDIN 958 Query: 678 SNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQP 732 N + I+ +I ++AR +AEYVEN+EI +++ L IDY QGY +GKP P Sbjct: 959 DNPTQHAILQAIINIARTLGKKTIAEYVENKEILQSLHKLNIDYGQGYFLGKPAP 1013 >UniRef50_D0IWU4 Diguanylate cyclase/phosphodiesterase with n=3 Tax=Comamonadaceae RepID=D0IWU4_COMTE Length = 869 Score = 169 bits (428), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 89/248 (35%), Positives = 146/248 (58%), Gaps = 16/248 (6%) Query: 498 NRLQQALEHNHFFLMAQPITGMR-------GDVYHEILLRMKGENDELISPDSFLPVAHE 550 R++ AL+ + F L AQ I ++ G ++ E+LLR++ EN ++++P F+P A Sbjct: 558 TRIRTALDEDRFCLYAQSIAPLQARKHSRHGGMHFEVLLRLRDENGQILAPGHFIPAAER 617 Query: 551 FGLSSSIDMWVIEHTLQFMAENRAKMPAH-----RFAINLSPTSVCQARFPVEVSQLLAK 605 +GL S+D WVI LQ +A+ P H AINLS S+ V + L + Sbjct: 618 YGLMPSLDRWVITRALQTLAQQ----PGHAKLVETCAINLSGPSLDDDGLLEFVKEQLQQ 673 Query: 606 YQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADL 665 + I +L FE+TE++A+ N+ A +Q L+ LGC+ A+DDFG G +S LK + D Sbjct: 674 HAIAPQKLCFEITETSAIGNLSNATRLIQSLRALGCRFALDDFGVGMSSLTYLKQLPVDY 733 Query: 666 LKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGY 725 LKIDG F+R+++ + D+ +V I + + +AE+VE+ EI E ++++G+DY+QGY Sbjct: 734 LKIDGGFVRDMLKDKGDHAMVEMINRIGQTLGKKTIAEFVESREIAEELMTMGVDYVQGY 793 Query: 726 LIGKPQPL 733 I +P+P+ Sbjct: 794 AIARPKPM 801 >UniRef50_B4RSB4 PAS sensor diguanylate cyclase and phophodiesterase n=1 Tax=Alteromonas macleodii 'Deep ecotype' RepID=B4RSB4_ALTMD Length = 950 Score = 169 bits (427), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 116/419 (27%), Positives = 214/419 (51%), Gaps = 38/419 (9%) Query: 340 NVRALNRALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQ 399 NV A+N A S +C++ + +++ + G + +++S + + + + Sbjct: 532 NVTAINLHREPAKPSVMCFIDMDRFKLVNDSCGHPAGDKLLKEISTIFRQFVNGQDLLAR 591 Query: 400 LSGNDLALRLNTESHQERITALDSHL---KQFRFFWDGMPMQPQIGVSYCYVRSPVNHIY 456 + G++ + +S E LD L +RF +D +V + + I Sbjct: 592 IGGDEFCIIFRNQSLDEVTQCLDKLLLAVSNYRFVYDD---------KLFFVGASIGVIE 642 Query: 457 LLLGELNTVAELSIVTNAPENMQR--RGAMYLQRELKDKVAM-------MNRLQQALEHN 507 + + A + NA + R ++ RE ++A+ ++ L +AL+H+ Sbjct: 643 INESTQSAEALIKAADNACYKAKHLGRNRYFVFRENDSQMAIDDSENQVLHALHKALQHD 702 Query: 508 HFFLMAQ---PITGMRGDV-----YHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDM 559 F L +Q P+T + + ++EILLR+ + LISP F+P+A GL + +D+ Sbjct: 703 GFELYSQAIMPLTVPQEEQGAHLQHYEILLRLNSKESGLISPGLFIPLAERHGLMNKVDL 762 Query: 560 WVIEHTLQFMAENRAKMPAH-----RFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLI 614 WV+++TL+ + N PAH + AINLS ++ +++Q + + A ++ Sbjct: 763 WVVDNTLKTLESN----PAHIDNVGKVAINLSGITLGDEMALHKIAQRMQSTTVPAEKIC 818 Query: 615 FEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIR 674 FE+TE+ A+TN+ A+ + L+++GC A+DDFG G +S+ LKN++ D +KIDGSF+R Sbjct: 819 FEITETTAVTNLNAAKHFISTLRDIGCSFALDDFGAGMSSFTYLKNLDVDYVKIDGSFVR 878 Query: 675 NIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPL 733 NIV + +D+ V +I ++A VAE+V + E + L +DY QG+ + KP+PL Sbjct: 879 NIVHDPIDHATVTAINNIAHSMGKQTVAEFVVDNATAEVLRKLKVDYGQGFALDKPKPL 937 >UniRef50_Q15NS8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15NS8_PSEA6 Length = 965 Score = 168 bits (425), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 91/244 (37%), Positives = 146/244 (59%), Gaps = 4/244 (1%) Query: 491 KDKVAMMNRLQQALEHNHFFLMAQP---ITGMRGDVYHEILLRMKGENDELISPDSFLPV 547 + +++ + R+Q AL HN F L QP +T + ++EILLR+ E+D+ I P FLP Sbjct: 703 ESQLSWLPRIQHALSHNGFELHCQPYMPMTSIAKGHHYEILLRLVDEHDQRILPSEFLPA 762 Query: 548 AHEFGLSSSIDMWVIEHTLQFMAEN-RAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKY 606 A + LS+ ID WVI+ ++A+N + K R INLS S+ + + + KY Sbjct: 763 AERYNLSAKIDRWVIDTYFAWLAQNPQHKADLMRCNINLSGHSLGEQDLKLFILSAFEKY 822 Query: 607 QIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLL 666 Q+ ++ FE+TES A+ + + + + LGC A+DDFG+G++SY LKN+ D + Sbjct: 823 QVPHNKICFEITESMAILKLDETIEFIDTFKALGCTFALDDFGSGFSSYNYLKNLPVDQV 882 Query: 667 KIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYL 726 KIDG F++NI+ +D +V SI +A K+ VAEYVE++EI + +G+D++QG+ Sbjct: 883 KIDGEFVKNILIAPVDMAMVNSIKDIASAMKIQTVAEYVESKEIMVELGKIGVDFVQGFG 942 Query: 727 IGKP 730 + KP Sbjct: 943 VNKP 946 >UniRef50_B8HP72 Diguanylate cyclase/phosphodiesterase with extracellular sensor n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HP72_CYAP4 Length = 820 Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 125/459 (27%), Positives = 216/459 (47%), Gaps = 63/459 (13%) Query: 333 DPVVHLPNVRALNRALRDA--------PWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLS 384 DP+ LPN R+ + LR + LC + + +++ G + +++S Sbjct: 367 DPLTELPNRRSFEQTLRASFTQSQRTQQEHVLCLVDLDRFKLVNDTSGHAAGDELLKQIS 426 Query: 385 HWLSPLLEPGEDVYQLSGNDLAL---RLNTESHQERITALDSHLKQFRFFWDGMPMQPQI 441 L + + V +L G++ + + ++ Q L S L FRF W Sbjct: 427 LLLKTQIRQTDVVARLGGDEFGIIFYHCSLDAAQRLAQKLQSSLATFRFVWQDRVFTVGA 486 Query: 442 GVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPE-----NMQRRGAMYLQRELKDKVAM 496 + + + V L E+ T A+L+ T + ++ R G+ L +L + V Sbjct: 487 SLGLAQISAHVAD----LAEVMTAADLACYTAKKQGGNRVHIHRIGSQALASQLGE-VHW 541 Query: 497 MNRLQQALEHNHFFLMAQPITGM----------------------------------RGD 522 +L+QA+E+N F L +QPI + + Sbjct: 542 AVQLRQAIENNRFCLYSQPIVPINRCSCQTVSGTLDPTVEPREATPIGATNPAACTSQSQ 601 Query: 523 VY--HEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFM------AENRA 574 Y E+LL + E +++I P+ FLP+A ++GL + ID W I + ++ A Sbjct: 602 PYLCQEVLLHLYDETNQVIDPNVFLPIAEQYGLITVIDRWAIHNLFAYIQAQHYPAATLD 661 Query: 575 KMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQ 634 +R+AINLS ++ A F + + LA YQ+ + FE+TE+ A+ N+K A +Q Sbjct: 662 SARGYRYAINLSGRTLDDASFADFLLEQLAAYQVPPAAICFEITETAAIANLKLAMPFIQ 721 Query: 635 HLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLAR 694 L+ GC A+DDFG G +S+A LKN+ D LKIDG+ I+++ +N ++Y IV +I +A Sbjct: 722 TLKAAGCLFALDDFGGGMSSFAYLKNLPVDYLKIDGTLIKDLSNNPVNYYIVQAINDIAH 781 Query: 695 MKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPL 733 + +AE V++ + +V +GID+ QG+ I +P PL Sbjct: 782 TMGIQTIAEGVDSLDTLSSVSQIGIDFAQGHYIAQPVPL 820 >UniRef50_A1SX34 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SX34_PSYIN Length = 799 Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 92/257 (35%), Positives = 155/257 (60%), Gaps = 9/257 (3%) Query: 489 ELKDKVAMMNRLQQALEHNHFFLMAQPITGM----RGDVYHEILLRMKGENDELISPDSF 544 E +D++ +RLQQA++ N F L AQPI + ++ E+LLR++ L+SP F Sbjct: 531 EQRDQMQWASRLQQAIDENRFELFAQPIMALDEQAEQGLHFEVLLRLRETGGALVSPAVF 590 Query: 545 LPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPA-HRFAINLSPTSVCQARFPVEVSQLL 603 + A +FGL++ ID WV+ + L++M + ++ H A+NLS SV F + + L Sbjct: 591 MASAEQFGLATQIDHWVVNNVLKWMKTHADELEKVHIIAVNLSGNSVGDRDFHQFLIEAL 650 Query: 604 AKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNA 663 Q+ ++ FE+TE+ A+ N+ A + + + G +I++DDFG+G +S A LK + Sbjct: 651 DHAQVPVQKISFEITETAAIENLDIATEFIAMVHQRGAKISLDDFGSGMSSMAYLKKLPV 710 Query: 664 DLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQ 723 D LKIDG F++++ ++++D +V SI +A + + +AE+VEN +I + +G+D+ Q Sbjct: 711 DYLKIDGQFVKDMENDTVDCAMVRSIKQIADLTGKITIAEFVENAKILMLLKDIGVDFAQ 770 Query: 724 GYLIGKPQPLIDTLNEI 740 GY IGKPQP +NEI Sbjct: 771 GYHIGKPQP----INEI 783 >UniRef50_Q1YVI9 Putative uncharacterized protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YVI9_9GAMM Length = 857 Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 124/441 (28%), Positives = 220/441 (49%), Gaps = 29/441 (6%) Query: 315 LATRQRAVVRRIQRLAYVDPVVHLPNVRALNR--------ALRDAPWSALCYLRIPGMEM 366 L + R V R+Q + D + LPN +L++ A + AL Y+ + + Sbjct: 419 LLSEARRVSSRLQWQSMHDSLTGLPNRASLSKHIQKAVEIARHEGATHALLYIDLYNFSV 478 Query: 367 LVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLAL---RLNTESHQ---ERITA 420 + G + ++ + L L P + ++ ++ AL R+N + + ERI A Sbjct: 479 INDTSGHTAGDELLKEFAQLLIRLAGPSDITARIGNDEFALLIHRVNYDKSRMLAERILA 538 Query: 421 LDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQR 480 +K+ R W+G ++ IG S + +++ L +L A S T + + Sbjct: 539 ---EVKELRVPWEGEVLK--IGASIGAIL--IDNTALSDIDLMISAGSSCATARDKGRNK 591 Query: 481 RGAMYLQRELKDKVAM---MNRLQQALEHNHFFLMAQPITGMRGDVY----HEILLRMKG 533 E+ + ++ M ++ AL+ + F L AQPI ++G +E+L+RM+ Sbjct: 592 IHFQSFNEEVARRRSLATSMPKIVSALDEDRFTLFAQPIVPLQGSATTAKCYEVLVRMRE 651 Query: 534 ENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPA-HRFAINLSPTSVCQ 592 + ++ P F+P A F L +D WV H+L+F+ +A+ A ++NLS T+V Sbjct: 652 SDGTILPPSEFIPGAEHFSLIDDLDKWVFSHSLKFLQRLQAQGSALPLLSVNLSGTTVGD 711 Query: 593 ARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGY 652 + + + I Q FE+TE+ A+ ++++A+ + L+ +G IA+DDFG+G Sbjct: 712 ENAIDYILRGFSDTGISPKQFQFEITETAAVKHLQEAKRLISTLRSVGVSIALDDFGSGL 771 Query: 653 ASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIRE 712 +S+A LK + D LKID SFI + ++ +DY +V++I HL + + VAE VENE Sbjct: 772 SSFAYLKELPIDCLKIDSSFIHTMENSDVDYSVVSTINHLGHIMGVTTVAEGVENENQLR 831 Query: 713 AVLSLGIDYMQGYLIGKPQPL 733 + +G+DY+QG+L PQPL Sbjct: 832 LLKKIGVDYLQGFLFQHPQPL 852 >UniRef50_A9KMR9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KMR9_CLOPH Length = 799 Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 100/347 (28%), Positives = 187/347 (53%), Gaps = 17/347 (4%) Query: 399 QLSGNDLALRLNTESHQERITALDS---HLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHI 455 ++ G++ + LN S E + ++ +K+FRF W+ + + + + + Sbjct: 454 RIGGDEFGVLLNGISQVEGLEIAENLCETVKKFRFVWEEKVFTLGVSIGAVIINRDLYEV 513 Query: 456 YLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELK-----DKVAMMNRLQQALEHNHFF 510 ++ + +S EN R ++ + E + +++ +M + +A E N F Sbjct: 514 SKVISAADQACYIS-----KENGGNRVQLFSESEQEFSLREEEMQVMPSITKAFEENRFL 568 Query: 511 LMAQPITGMRGDVY--HEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQF 568 L+ Q I + V +E L+R+K E +L+SP +FLP A + + ID WVI + + Sbjct: 569 LVYQDIVRVSDKVLSGYEALIRLKDEQGQLVSPGTFLPAAQRYNKLTDIDRWVITNFCKN 628 Query: 569 MAENRAKMPAHRF--AINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNV 626 ++ + F IN+S TS+ F + ++Q+ ++ FE+TE++A++N Sbjct: 629 YDFHQIGSIENDFIYNINISATSINAEGFLEFICHQFEEHQVPPQRVCFEITETSAVSNF 688 Query: 627 KQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIV 686 +A+ +Q L++LGC+ A+DDFG+G +S+ LK + D +KIDG + +I +N +DY +V Sbjct: 689 VKAKEFIQELKKLGCRFALDDFGSGLSSFTYLKYLPVDYIKIDGIIVNDIDTNKIDYALV 748 Query: 687 ASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPL 733 +SI +A + M +AEYVENE+I + +G+DY QG+ +G+P+ L Sbjct: 749 SSINEIAHLMGMKTIAEYVENEDIFNCLREIGVDYAQGFWLGEPKGL 795 >UniRef50_B4SPP4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=30 Tax=cellular organisms RepID=B4SPP4_STRM5 Length = 807 Score = 167 bits (423), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 131/467 (28%), Positives = 232/467 (49%), Gaps = 42/467 (8%) Query: 304 VFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALR--------DAPWSA 355 VF+ I + ++ A+ R I+ A DP+ L N R + R L + + Sbjct: 346 VFAIIEDV-----SQNHALAREIEHHASHDPLTGLINRREIERLLERSLLQVRSEGGTHS 400 Query: 356 LCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQ 415 LCY+ + +++ ++G Q + + +L + G+ V +L ++ A+ L Sbjct: 401 LCYINLDHFKLVNDSFGHAAGDQMLRSFADYLVAAVRDGDWVGRLGADEFAVFLAHAGQD 460 Query: 416 ERITALDS---HLKQFRF-FWDGMP-MQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSI 470 E L +L Q F +G P + IGV +P + +L+ + A+ + Sbjct: 461 EAKRVLQRVIRNLGQATFPISEGSPQLSCSIGVVEVNAEAP-DANWLM-----SAADSAC 514 Query: 471 VTNAPENMQRRGAMYLQR-ELKDKVAMMNRLQQ---ALEHNHFFLMAQPITGMRGD---V 523 R R L+++ RLQ A+ N L AQ I + GD + Sbjct: 515 YAAKQAGRNRVHCFNENRLALEERRQEAERLQGVSLAMAENRMLLYAQRIARV-GDPSYL 573 Query: 524 YHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFA- 582 ++E+L+RM+G + L P F+P +G++ ++D H L + + PAH Sbjct: 574 HYEVLVRMRGTDGSLHLPGQFMPAVERYGMAVALD----RHVLGLLFRHLQVCPAHVRQL 629 Query: 583 ----INLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQE 638 +N+S S+ + F V LL + + A +L FE+TE+ A++N+ QA+ + ++ Sbjct: 630 GLCNVNVSAQSIAEPGFLAFVCDLLERNRALASKLCFEITETAAISNLSQARAFIDAVKA 689 Query: 639 LGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKM 698 GC++A+DDFG+G +S+ L+ + AD+LKIDG+F+R++ ++ + + V +I L R +M Sbjct: 690 RGCRMALDDFGSGLSSFGYLRQLPADILKIDGTFVRDMDTDPISHATVRAISELGRELQM 749 Query: 699 LVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLID-TLNEIEPIR 744 VVAE+VE E+ A+ LG+ +QGY I +PQPL TL+++ P+R Sbjct: 750 EVVAEWVETAEVAAALTRLGVQGLQGYAIERPQPLERMTLSDLRPVR 796 >UniRef50_Q3JW35 EAL/GGDEF domain protein n=50 Tax=pseudomallei group RepID=Q3JW35_BURP1 Length = 806 Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 113/358 (31%), Positives = 177/358 (49%), Gaps = 30/358 (8%) Query: 397 VYQLSGNDLALRLNTESHQERITA---LDSHLKQFRFFWDGMPMQPQIGVSYCYVRSP-- 451 V +L G++ + L+ ++A L + + F F WDG P V + P Sbjct: 450 VARLGGDEFCVLLDARDEASAVSAAERLRASVDGFVFVWDGQPFSVTASVGVALLGGPGR 509 Query: 452 ---VNHIYLLLGELNTVAELS----IVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQAL 504 V L G VA+ + P + + L + D V+ R++QAL Sbjct: 510 APRVEDAVRLAGIACDVAKARGRNRVQLADPHDHE------LAHHISD-VSWCARVRQAL 562 Query: 505 EHNHFFLMAQPI--------TGMRGDVYHEILLRMK--GENDELISPDSFLPVAHEFGLS 554 E++ F L QPI TG+ E+LLRM GE + + P F+ A +GL Sbjct: 563 EYDDFRLYVQPIVDTATQGATGLPRARRGELLLRMGALGEREGVAPPGLFIRAAERYGLV 622 Query: 555 SSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLI 614 + ID WV+ L +A R++ + +AINLS S+ RF V + A+ ++ + Sbjct: 623 TDIDRWVVRTVLDALARTRSRRFSE-YAINLSGISIGDERFLDYVLEQFARTRVAPALIC 681 Query: 615 FEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIR 674 FE+TE+ A+ N+ A + L+ LGC+ A+DDFG+G AS + LK + + LKIDGSF+ Sbjct: 682 FEITETAAIANLAGALRFMHELKALGCRFALDDFGSGMASLSYLKQLPVEYLKIDGSFVT 741 Query: 675 NIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQP 732 I +++ IVASI + +AEYV++ + + +LG+DY QGY IG+P P Sbjct: 742 GIANDAASLDIVASINDIGHAMNCKTIAEYVDSAATLQKLAALGVDYAQGYYIGRPVP 799 >UniRef50_Q30WY0 Diguanylate cyclase/phosphodiesterase n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q30WY0_DESDG Length = 566 Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 127/431 (29%), Positives = 212/431 (49%), Gaps = 37/431 (8%) Query: 326 IQRLAYVDPVVHLPNVRA----LNRALRDAPWS-ALCYLRIPGMEMLVKNYGIMLRIQYK 380 +Q A D + LPN R L A++ AP AL ++ I + + ++ + Q Sbjct: 137 LQHQAVHDYLTGLPNRRLIMELLGEAMQTAPAGYALVFVDIMNFKRVNISFAHYVGDQIL 196 Query: 381 QKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQE---RITALDSHLKQFRFFWDGMPM 437 +++ L ++PG+ +L G+D A+ L T S +E R A+ + LKQ F D + Sbjct: 197 EQVGQRLQTSMKPGDVAARLGGDDFAILLRTGSPREAVQRTQAVKAALKQPYFSGD---I 253 Query: 438 QPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQR---RGA---MYLQRELK 491 Q + + L +G ++ A M R RG R ++ Sbjct: 254 QFSLDCGFG----------LYMGTAQDTRPEHVIAKANTAMMRAKQRGRNRIAVFSRSMQ 303 Query: 492 DKVAMM----NRLQQALEHNHFFLMAQP---ITGMRGDVYHEILLRMKGENDELISPDSF 544 DK + N+ +++L + FFL+ QP +T + E L+R ++SP F Sbjct: 304 DKAQLTIHFENQFRRSLRNGDFFLVFQPQYALTPQPELIGFETLVRWNHPERGIVSPAEF 363 Query: 545 LPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHR---FAINLSPTSVCQARFPVEVSQ 601 +P+A GL +D +V+ + E RA +PA R F++NLS + + + F ++ + Sbjct: 364 VPMAETTGLILHLDRYVLREACRIWGEMRASLPACRALHFSVNLSASHMDRPTFIRKLEK 423 Query: 602 LLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNV 661 LA +++ +I E+TES ++N + A +Q+L+ +G +A+DDFGTGY+S A L Sbjct: 424 TLAAFEMPHESIILELTESALMSNPETAARKMQYLRSIGLHVALDDFGTGYSSLAYLTRF 483 Query: 662 NADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDY 721 LKID SF+ NI ++ ++V +I HLA M+ +AE VE E + +G D Sbjct: 484 PCYCLKIDKSFVDNITTDENSVRVVRAIIHLAHGLGMVALAEGVETPEQLAQLQDMGCDQ 543 Query: 722 MQGYLIGKPQP 732 +QGYL+GKP P Sbjct: 544 VQGYLLGKPMP 554 >UniRef50_B4S311 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=4 Tax=Alteromonas macleodii RepID=B4S311_ALTMD Length = 945 Score = 166 bits (420), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 101/328 (30%), Positives = 172/328 (52%), Gaps = 30/328 (9%) Query: 425 LKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAM 484 ++ +RF WD +GVS + + E+N LS+ A + +G Sbjct: 627 VQAYRFMWDNRIFN--LGVS-------IGMVVCEDTEVNAGQYLSMADAACYFAKEQGRN 677 Query: 485 YLQRELKDKVAM---------MNRLQQALEHNHFFLMAQ---PITGMRGDVYHEILLRMK 532 + R KD +M ++ + ALE F L Q P+ Y+E+LLR++ Sbjct: 678 QVHRYNKDDESMQRYQRELDWVSSINNALEEGRFELYYQSLRPLNQTTDGHYYEVLLRLR 737 Query: 533 GENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAH-----RFAINLSP 587 +N L+ P +FLP A F ++ ++D WV+ +T ++++EN P H R +INL+ Sbjct: 738 EKNGNLVEPANFLPTAERFEMNVNVDKWVVTNTFKWLSEN----PEHLAELKRCSINLNC 793 Query: 588 TSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDD 647 S+ F + + + I ++ FEV ES A+ ++ ++ LGC A+DD Sbjct: 794 HSLADRDFTLFILNAFETFNIPYNKVCFEVIESVAIIKMEDTLSFMRTFNRLGCSFALDD 853 Query: 648 FGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVEN 707 FG+G++SY+ LK++ + +KIDG FI++++++S+D +VASI +A+ M V E+VEN Sbjct: 854 FGSGFSSYSYLKSLPVNQVKIDGMFIKDMLNDSVDTAMVASINDVAKAMGMQTVGEFVEN 913 Query: 708 EEIREAVLSLGIDYMQGYLIGKPQPLID 735 E + +G+D+ QGY + KP PL D Sbjct: 914 EGTLAQLGKMGVDFAQGYGVAKPAPLRD 941 >UniRef50_C5BTR2 PAS sensor diguanylate cyclase/phophodiesterase n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BTR2_TERTT Length = 1416 Score = 166 bits (419), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 130/422 (30%), Positives = 213/422 (50%), Gaps = 35/422 (8%) Query: 342 RALNRALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLS 401 RA+ + R+ S+L Y+ + +++ G + Q ++L+ + +L + +L Sbjct: 1001 RAIATSRREGIESSLLYMDLDQFKVINDTCGHLAGDQLLKQLAQLIRDMLRTRDTFARLG 1060 Query: 402 GNDLALRLNTESHQERITALDSHLKQ----FRFFWDGMPMQPQIGVSYCYVRSPVNHIYL 457 G++ A+ L+ E A+ +KQ +RF W+ + +GVS V I+ Sbjct: 1061 GDEFAILLDHCPILE-AEAIAQKIKQKVCDYRFAWEDKAFR--VGVSIGIV-----GIHP 1112 Query: 458 LLGELNTVAELSIVTNAPENMQRRGAMYLQRELKD-KVAMMNRLQ--------QALEHNH 508 + +L+ V LS A + G +Q +D KV RLQ QA+E +H Sbjct: 1113 SVSQLSQV--LSDADAACYAAKEAGRNCIQIHTQDNKVLEAQRLQMRSISDINQAIESDH 1170 Query: 509 FFLMAQPITGMRGDVYH--EILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTL 566 F L Q I + EIL+RM E + P FLP A FGL + ID WV+E L Sbjct: 1171 FRLYFQQIHAVGSGAIQSWEILIRMFNATGEFLLPSHFLPAAERFGLINRIDTWVMESAL 1230 Query: 567 QFMAENRAKMPAHRF---AINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNAL 623 + +A+ + F + N+S ++ + VS+L +YQ A ++ FE+TE++ + Sbjct: 1231 RNVAQYFGQGKERDFPLLSFNVSGATISDPAYLDLVSELFTRYQYPANKISFEITETSVV 1290 Query: 624 TNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDY 683 N+ +A ++ +ELGC++A+DDFGTG +S + L + D +KID SF++NIV N ++ Sbjct: 1291 RNLVKASEFMRRARELGCKLALDDFGTGLSSLSYLGELPVDRVKIDMSFVKNIVDNPVNR 1350 Query: 684 QIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPL-------IDT 736 IV S+ +A + K+ VVAE VE + LG+D QG+L GKP P +DT Sbjct: 1351 AIVNSVKEVAHLLKLEVVAEGVETPAQLACLRELGVDAYQGFLAGKPLPFEEFVCRSLDT 1410 Query: 737 LN 738 +N Sbjct: 1411 IN 1412 >UniRef50_A4BRP5 Putative uncharacterized protein n=2 Tax=Gammaproteobacteria RepID=A4BRP5_9GAMM Length = 1285 Score = 165 bits (417), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 118/436 (27%), Positives = 210/436 (48%), Gaps = 30/436 (6%) Query: 328 RLAYVDPVVHLPNVRALNRALRDAP--------WSALCYLRIPGMEMLVKNYGIMLRIQY 379 R A DP+ N +AL +AL P W AL Y + G +++ G + Sbjct: 857 RFATHDPLTGCLNRKALQKALEQLPSGREAHNQWHALLYFALDGFKVINSTLGHEGGDEL 916 Query: 380 KQKLSHWLSPLLEPGEDVYQLSGNDLA-LRLNTESHQERITALDSHLK--QFRFFWD--G 434 Q+++ L + V ++ G++ A L + +++ R+ A L + RF D Sbjct: 917 LQQVADQLRESIAGRGCVARMGGDEFAVLAEHCSANEARVLAEQQRLALYERRFVRDDES 976 Query: 435 MPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTN-----APENMQRRGAMYLQRE 489 + + +GV + S L + +A + N P++ + ++ Sbjct: 977 LTVSASVGVVPFTLESRSPKGLLKDADEACLAAKNAGGNHLHMLTPDDRE-------LKQ 1029 Query: 490 LKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDV----YHEILLRMKGENDELISPDSFL 545 L+ +A ++ +ALE L Q I + D ++EIL+ + G D LI P F+ Sbjct: 1030 LRSSMAQAAQVDKALETGKLRLRCQRIQPIADDPALRPFYEILISILGPTDHLIPPKDFI 1089 Query: 546 PVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPA-HRFAINLSPTSVCQARFPVEVSQLLA 604 P A FG +++D WVI L + A N + F +NL ++ + L Sbjct: 1090 PAAERFGRMTAVDRWVIREVLDWCAHNGDALTTLDGFTVNLCGPTLNDGDLANYLRSQLD 1149 Query: 605 KYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNAD 664 + + L FEVTE+ A+ N+ +A ++ ++ELGC+ ++DDFG+G +SY+ LKN+ D Sbjct: 1150 RTGVSGELLCFEVTETAAVQNLARAADLIREVKELGCRFSLDDFGSGLSSYSYLKNLPVD 1209 Query: 665 LLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQG 724 LK+DG F+R+I + D+ +V SI L +AE+VEN+++ + +G+D+ QG Sbjct: 1210 YLKVDGQFVRDIDRDEADHAMVRSINELGHFLGKRTIAEFVENDKVLYQLKDIGLDFAQG 1269 Query: 725 YLIGKPQPLIDTLNEI 740 Y +G+P P+ + + +I Sbjct: 1270 YGVGRPMPIEELIGQI 1285 >UniRef50_C8W213 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W213_DESAS Length = 1278 Score = 165 bits (417), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 128/488 (26%), Positives = 240/488 (49%), Gaps = 56/488 (11%) Query: 279 HSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLAT-----RQRAVVRRIQRLAYVD 333 S+ N+I +T++ + +S+ +F N + + T +R + + ++ LA D Sbjct: 802 ESHVNFIK----KSTEIVMWASASPLFDNAGNLVGAIETIRDITERRNMEKELKYLASHD 857 Query: 334 PVVHLPNVRALNRALRDAPW-------SALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHW 386 + + N +L + L A SAL ++ + +++ G Q + LS Sbjct: 858 FLTGIHNRYSLEKCLEQAVKKVAEGVKSALLFIDLDNFKLVNDTLGHAAGDQLLKTLSAT 917 Query: 387 LSPLLEPGEDVYQLSGNDLALRL-NTESHQERITA------LDSHLKQFRFFWDGMPMQP 439 + L+ G +++ G++ A+ L N + +TA ++ H + M Sbjct: 918 IGSFLQGGHRIFRFGGDEFAVLLENVTVEEAGMTAENLRLLIEEHEFCLTMYKTCFNMTI 977 Query: 440 QIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTN----APENMQRR------GAMYLQR- 488 IG I ++ G L+ L+ N A E + R G R Sbjct: 978 SIG------------IVIIDGILDFHKILAYADNSLYKAKEGGRNRVVFAQAGDDVTARM 1025 Query: 489 -ELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSFL 545 E K+A+ ++ AL+ + F L QP+ M+ +HE L+RM G+N E+ISP+ FL Sbjct: 1026 SETNHKIAL---IKTALKEDRFILYLQPVVRMKDGKITHHETLIRMLGDNGEIISPNYFL 1082 Query: 546 PVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAK 605 VA FGL + ID WV++ ++ + E P + INLS S+ + + + Sbjct: 1083 TVAERFGLIAQIDRWVVQAAMKLLME----YPDLKLFINLSGVSMGDMSLLDAIEKDIIG 1138 Query: 606 YQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADL 665 ++ ++ FE+TE++A+ +++QA+ + +++LGC A+DDFG G++S++ LK + D Sbjct: 1139 SNLDTSRIGFEITETSAMRDIRQAEEWIGRIKKLGCSFALDDFGVGFSSFSYLKILPVDY 1198 Query: 666 LKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGY 725 LKIDG+F+ +I +S +V+S+ +AR +AE+VEN++I ++ +G++Y QG+ Sbjct: 1199 LKIDGTFVCDIYKDSTHAALVSSMNTIARTLGKKTIAEFVENQQIINMLIEIGVEYGQGF 1258 Query: 726 LIGKPQPL 733 + +P P+ Sbjct: 1259 YLAEPSPV 1266 >UniRef50_C0N8Q5 Cyclic diguanylate phosphodiesterase domain protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N8Q5_9GAMM Length = 727 Score = 165 bits (417), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 123/435 (28%), Positives = 229/435 (52%), Gaps = 20/435 (4%) Query: 317 TRQRAVVRRIQRLAYVDPVVHLPNVR--------ALNRALRDAPWSALCYLRIPGMEMLV 368 T ++ +RI +A DP+ L N R +L A+R +AL YL + + + Sbjct: 269 TDKKEAEKRIVWMAEHDPLTDLCNRRKFIEEFEKSLRTAIRYKHNNALLYLDLDQFKDIN 328 Query: 369 KNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERI---TALDSHL 425 G + ++++ L + + V +L G++ A+ + + + + L Sbjct: 329 DTSGHSAGDELLKEVAKTLKRVTRFTDLVARLGGDEFAVLMPETDEVGAVVLTKKIQAEL 388 Query: 426 KQFRFFWDGMPMQPQIGVSYCYVRSPVNH--IYLLLGELNTVAELSIVTNAPENMQRRGA 483 ++ + + + + +I S V PV+ I+ L+G + +A + A Sbjct: 389 QKIQLEYGNV--KHKISSSIGIVNYPVHDASIHELMG-FSDLAMYKAKSAGKNTYHIFSA 445 Query: 484 MYLQRE-LKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDV--YHEILLRMKGENDELIS 540 RE L+ +V ++++ ALE+N F L QPI + +V ++E+L+RM+ I Sbjct: 446 DDQTREQLETRVFWKHKIEDALENNLFVLHYQPILNIENNVIQHYEVLIRMREPGSGQIR 505 Query: 541 -PDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEV 599 P F+ +A + GL SID +VI+ ++ ++ + + +FAINLS + V + Sbjct: 506 MPGKFIEIAEQVGLIQSIDHFVIQQGIKHLSRLQKQGLKVKFAINLSGSVVDAPVLLPFL 565 Query: 600 SQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLK 659 +LL KY+++ LIFEVTE+ A++N++QA++ + ++ LGCQ ++DDFG G+AS+ ++ Sbjct: 566 KRLLKKYELDPSGLIFEVTETAAVSNLQQAKLMMTAVKALGCQFSLDDFGVGFASFNYMR 625 Query: 660 NVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGI 719 + D++KIDG FI+++ N+ D V ++ +A+ +AE+VEN++I + G+ Sbjct: 626 QLPIDIIKIDGIFIKDLDKNADDQLFVKALIDVAKGLGKKTIAEFVENKDILTLLRQYGV 685 Query: 720 DYMQGYLIGKPQPLI 734 DY QGY IG+P+P I Sbjct: 686 DYAQGYHIGRPEPKI 700 >UniRef50_A6AP12 FOG: EAL domain protein n=2 Tax=Vibrio harveyi RepID=A6AP12_VIBHA Length = 661 Score = 165 bits (417), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 95/255 (37%), Positives = 146/255 (57%), Gaps = 4/255 (1%) Query: 487 QRELKDKVAMMNRLQQALEHNHFFLMAQP---ITGMRGDVYHEILLRMKGENDELISPDS 543 +E K+ + ++ +QQ N F L QP ++ EILLR++ D L+SP Sbjct: 400 DQEQKNTLDQLSFIQQCFRKNEFELYCQPYRALSEANQAANFEILLRLRPSKDTLMSPGE 459 Query: 544 FLPVAHEFGLSSSIDMWVIEHT-LQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQL 602 F P+ +EFGL +D WVIEHT L A+ R +INL+ ++ ++ Sbjct: 460 FFPLINEFGLELELDNWVIEHTFLSLKAQIHDWRSVGRCSINLTAKALNSEGLAEQIQTK 519 Query: 603 LAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVN 662 A ++I +L FE+TES+AL N A L L++ G IA+DDFGTGYAS+ L+ + Sbjct: 520 AALHEIPMNKLCFEITESDALCNEPIAIQNLNLLRKAGSTIALDDFGTGYASFDYLRRLP 579 Query: 663 ADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYM 722 D+LK+DGSF+++IV++ D IV +I +AR ++ VAE+VE+E E + +L I + Sbjct: 580 LDVLKVDGSFVKDIVASENDRIIVQAISQVARSMNLVTVAEFVESEAHIETLRALNIQFA 639 Query: 723 QGYLIGKPQPLIDTL 737 QG+ + KP PL + L Sbjct: 640 QGFGVSKPIPLSEHL 654 >UniRef50_C7RRQ6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RRQ6_9PROT Length = 1014 Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 125/441 (28%), Positives = 207/441 (46%), Gaps = 31/441 (7%) Query: 317 TRQRAVVRRIQRLAYVDPVVHLPN--------VRALNRALRDAPWSALCYLRIPGMEMLV 368 T R + R++ A D + L N RA+ A +D LCYL + +++ Sbjct: 574 TETRELARQLAHDATHDALTGLINRPEFERRLQRAVTSARQDGARHVLCYLDLDQFKVVN 633 Query: 369 KNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDS----H 424 G + Q+++ L+ + + + ++ G++ AL L +R A+ + Sbjct: 634 DTAGHAAGDELLQQINTILAGMFRESDTLARIGGDEFAL-LQENCPLDRAYAIAQSVVRN 692 Query: 425 LKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELN----TVAELSIVTNAPENMQR 480 +++ RF W G Q + + + + LL E + T EL N QR Sbjct: 693 VREHRFNWQGRSYQIGVSIGLVPITAETQDTVQLLTEADIACYTAKELG--RNRVHVYQR 750 Query: 481 RGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRG----DVYHEILLRMKGEND 536 + +QR ++ L+ AL+ F L QPI ++G V +E LLR+ + Sbjct: 751 TDSESVQRH--SEILGAAGLRDALDQGLFRLHYQPIVALQGPDFRTVRYEALLRVAHPGN 808 Query: 537 -----ELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVC 591 EL+ P +F+P A + L +ID WVI+ + A N + R AINLS S+ Sbjct: 809 TQRKGELVLPAAFIPAAERYNLMGAIDRWVIQAAFREYA-NGVGLGGARLAINLSGNSLS 867 Query: 592 QARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTG 651 + ++ + FE+TE+ A+ N+ A + L+ GC +A+DDFG+G Sbjct: 868 DESLLAFIESQFVEHAFPPERACFEITETAAIQNLGPALGLMAALKGHGCHLALDDFGSG 927 Query: 652 YASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIR 711 +S+ LK + D LKIDGSF++++ + D +VA+I ++ + VAEYV +E I Sbjct: 928 LSSFHYLKTLPVDYLKIDGSFVKDMCEDPRDDALVAAINQMSHAMGIQTVAEYVCSESIA 987 Query: 712 EAVLSLGIDYMQGYLIGKPQP 732 E + LG+DY QGY GKP P Sbjct: 988 ERLCELGVDYAQGYFFGKPMP 1008 >UniRef50_Q12JD4 Diguanylate cyclase/phosphodiesterase n=2 Tax=Shewanella RepID=Q12JD4_SHEDO Length = 755 Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 119/408 (29%), Positives = 209/408 (51%), Gaps = 27/408 (6%) Query: 344 LNRALRDAPWSALC--YLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLS 401 L+ AL+D + C +L + +++ G + +++ L LL G+ V +L Sbjct: 333 LDEALKDPDSANACVAFLDLDQFQVINDVSGHQAGDELLCQVAKRLKLLLRKGDVVARLG 392 Query: 402 GNDLALRLNTESHQERITALDS----HLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYL 457 G++ + + + + QE T + L + F W + + + + IY Sbjct: 393 GDEFGILMYSAT-QESATLVAKRICLQLSEHEFQWRKVKHNVSVSMGLAKLDKNAGDIYT 451 Query: 458 LLGELNTVAELSIVTNAPENMQRRGAMYLQRE-----LKDKVAMMNRLQQAL---EHNHF 509 +L +++ L A E + + Y + + L +++ + AL E F Sbjct: 452 VLSQIDASCRL-----AKEEGRNQWHFYSKDDPQISKLYNQMLASVDITGALALDEFELF 506 Query: 510 FLMAQPITGMRGDVYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFM 569 + + +P+ ++ E+LLRM ++ +SP FLP A + L+S ID WVI++ L++ Sbjct: 507 YQLIEPLEKADTGLHMEVLLRMVQKDGSYVSPAIFLPAAERYNLASRIDRWVIDNLLKWG 566 Query: 570 AENRAK-MPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAW---QLIFEVTESNALTN 625 A N A +INLS S+ +F +S L + +E +L FE+TE+ A++ Sbjct: 567 ANNLATWQQLTMVSINLSALSLGDQKF---MSWLEMRLMVEPELVDKLCFEITETAAVSQ 623 Query: 626 VKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQI 685 + QA + LQ LGC++A+DDFG+G++S+A LK ++ D +KIDG F+ N+ + D I Sbjct: 624 LDQATALIDLLQPLGCKLALDDFGSGFSSFAYLKCLDVDFVKIDGQFVVNLCQDKSDKAI 683 Query: 686 VASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPL 733 VA+IC L + + V+AE+VE+ E+ + +LG+DY QGY I KPQ L Sbjct: 684 VAAICQLGKDMEFEVIAEFVESVEVGYLLKNLGVDYAQGYAIAKPQRL 731 >UniRef50_B8GPR3 Signal transduction protein n=2 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GPR3_THISH Length = 571 Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 118/407 (28%), Positives = 209/407 (51%), Gaps = 25/407 (6%) Query: 343 ALNRALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSG 402 AL +A R P SAL Y+ + +++ G ++L+ L + + + +L G Sbjct: 167 ALAKARRQRP-SALLYIDLDQFKLVNDTCGHQAGDDLLRQLASLLQIPVREHDTLARLGG 225 Query: 403 NDLALRLNT---ESHQERITALDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLL 459 ++ + L+ E ++ + S + FR+ W + + + P L L Sbjct: 226 DEFGVLLDECTLEQAEQVARRMLSIVNDFRYTWGEHNFRIGASIGLTLLDDP----DLSL 281 Query: 460 GELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMN--------RLQQALEHNHFFL 511 ++ A+++ + R ++L RE D+ M R+ +ALE + F L Sbjct: 282 SDVMRHADMACYAAKDKGRNR---VHLFRE-DDRTLMARHSEMQWTARINEALEQDRFLL 337 Query: 512 MAQPITGMRGDV--YHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFM 569 Q I ++ D + EILLRM + E+ISP +F+P A + L ++D V+E TL + Sbjct: 338 YYQEIHPLKPDTAGHCEILLRMLDPSGEVISPWAFIPAAERYNLMPTVDRKVLELTLPRI 397 Query: 570 AE--NRAKMP-AHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNV 626 + ++P +R+ INLS ++ F V++ L ++ I L FE+TE+ + N+ Sbjct: 398 RQLLREGQVPKGYRWFINLSGLTLGDDAFLAHVTERLREHAIPPEALGFEITETAVIANL 457 Query: 627 KQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIV 686 A +Q +++LGC +A+DDFGTG +S++ L N+ AD +KIDG F+R++ N + IV Sbjct: 458 GNAVRFIQRMRDLGCHVALDDFGTGLSSFSYLSNIPADYIKIDGGFVRDMHENEMHQAIV 517 Query: 687 ASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPL 733 +I + + + +AE+VE E +R+ + LG+DY QGY I +P+PL Sbjct: 518 EAINRIGHVAGLRTIAEFVETEGVRQRLAQLGVDYAQGYGIARPRPL 564 >UniRef50_C7RCU7 Diguanylate cyclase/phosphodiesterase with Chase sensor n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RCU7_KANKD Length = 783 Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 83/240 (34%), Positives = 139/240 (57%), Gaps = 2/240 (0%) Query: 493 KVAMMNRLQQALEHNHFFLMAQPITGMRGD-VYHEILLRMKGENDELISPDSFLPVAHEF 551 +V +NR+ +AL+ + F L Q I + GD E+L+ M E+ +I P F+P A F Sbjct: 543 QVLWVNRINKALDEDRFALRTQTIKDLNGDGDLKEVLVVMLDEHGGMIPPIEFIPAAERF 602 Query: 552 GLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAW 611 + +D WV+ L+++ N ++ + + INLS S+ F + + +++ Q A Sbjct: 603 NIMPQVDNWVVNRVLEYLEAN-SQASDYLWCINLSGVSLNSEEFRESLVEQISENQELAQ 661 Query: 612 QLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGS 671 ++FE+TE+ A+ N + + + L GC+ A+DDFG+G +SY L+N+ D +K+DGS Sbjct: 662 YMVFEITETAAINNYELVKEFIDSLNRFGCKFALDDFGSGMSSYGYLRNIPVDFIKVDGS 721 Query: 672 FIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQ 731 FI+ I+ N D IV SIC ++ + +AE+VENE++ + +G DY QGY I KP+ Sbjct: 722 FIKQILENDYDQTIVKSICEISVQLGIKTIAEFVENEQVLNKIKEMGFDYGQGYHIDKPK 781 >UniRef50_C8T3N0 Putative uncharacterized protein n=1 Tax=Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884 RepID=C8T3N0_KLEPR Length = 538 Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 130/528 (24%), Positives = 245/528 (46%), Gaps = 22/528 (4%) Query: 26 LPIFAHINTFAHISSGEVFLFYLPLALMISMMMFFSWAALPGIALGIFVRKYAELGFYET 85 +P+ I+ I +++ +LP+++M S++ F A+ + L + F Sbjct: 23 IPLARFISPQTIIDGNLIYIAWLPISVMFSVIFIFGRYAIAPLILAFAITN----SFLIK 78 Query: 86 LSLTANFIIIIILCWGGY------RVFTPRRNNVSHGDTRLISQRIFWQIVF-PATLFLI 138 L+L FI++ + + R+ +R + + RIFW F P L + Sbjct: 79 LTLPQAFILLFCQLFAVFVSCAILRLLVGKRWRCGP-TAKHMGARIFWGGFFAPVLLKIT 137 Query: 139 LFQFAAFVGLLASRENLVGVMPFNLGTLINYQALLVGNLIGVPLCYFIIRVVRNPFYLRS 198 ++ + + + G MP + T+I+ Q+L+ LI Y+ +R++ +P Y R Sbjct: 138 MYLAGQYFAFPLAITSYFGSMPL-IYTVIDIQSLISAALIFTTFLYYPMRMIISPRYARR 196 Query: 199 YYSQLKQQVDAKVTKKEFALWLLALGALLLLLCMPLNEKSTIFSTNYTLSLLLPLMMWGA 258 ++ Q A + W +AL +L LLC P + F Y + ++ + G Sbjct: 197 FWQQECLPWLAPQYRSFTLYWFIALAVILTLLCAPYQSE---FIAGYLVPVIFIVYFIGI 253 Query: 259 MRYGYKLISLLWAVVLMISIHSYQNYIPIYPGYTTQ--LTITSSSYLVFSFIVNYMAVLA 316 R G+ L+ + W+V + + +N++ G ++ L+ S + F+ + YMA + Sbjct: 254 SRIGHALLRISWSVSAFLLVVYNKNFLQ---GVQSEYSLSFVLSVLISFTICLFYMADIY 310 Query: 317 TRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRDAPWSALCYLRIPGMEMLVKNYGIMLR 376 R RR + A DP+ LPN+RAL L+ P A+C LRI ++ L ++YG+M+ Sbjct: 311 ARSDRNKRRWRSQAEEDPLTGLPNLRALESHLQSCPQQAICSLRIDNLDFLSRHYGLMMG 370 Query: 377 IQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLKQFRFFWDGMP 436 + K+++ L PLL + V+Q+ G++L L L+ R+ + + L +F W P Sbjct: 371 VDCKRQIIRALQPLLGAADKVFQVPGSELILVLDGPEPSSRLNHMVAVLNHKKFSWHNQP 430 Query: 437 MQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAM 496 + + G ++ +Y +LG+L+ ++E + + + + + ++V + Sbjct: 431 LDLEFGAAWGRDDGQGEGLYQMLGQLSWLSEQAGSERRVLALDEEQDLVVD-QTTEQVRL 489 Query: 497 MNRLQQALEHNHFFLMAQPITGMRGDVYHEILLRMKGENDELISPDSF 544 + R++Q L+ L AQPI G+ YHEIL RM+ L DSF Sbjct: 490 LMRVKQVLKDRALMLYAQPIQNPEGEGYHEILTRMRVAIASLCPTDSF 537 >UniRef50_B4AXX8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4AXX8_9CHRO Length = 619 Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 132/442 (29%), Positives = 211/442 (47%), Gaps = 33/442 (7%) Query: 317 TRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRDAPWS--------ALCYLRIPGMEMLV 368 ++ R + R++ A DP+ L N + + + A + L YL + +M+ Sbjct: 177 SQARQLTRQLSWQASHDPLTGLVNRQVFEQRVEKALENVKSQNMTHTLGYLDLDKFKMIN 236 Query: 369 KNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRL---NTESHQERITALDSHL 425 + G + +++S L + + + +L G++ L L E ++ L L Sbjct: 237 DSCGHVAGDHLLRQISFLLQQQIRSSDTIARLGGDEFGLLLLNCPIEEGKKIAETLRQAL 296 Query: 426 KQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMY 485 + FRF W+ IG S V P++ + L A+ + R Sbjct: 297 EDFRFIWEQQRFS--IGASIGLV--PIDAESADVTTLLDTADTACYVAKSRGRNRIHTFS 352 Query: 486 LQRELKDKVAM----MNRLQQALEHNHFFLMAQ---PITGMRGDVYHEILLRMKGENDEL 538 L E ++ ++RL QALE+N F L Q PIT G ++E+LLR+ E + Sbjct: 353 LDEEELNQQGQARLWVSRLNQALENNKFCLYTQRIAPITSAIGTNHYEVLLRLVDEQGNM 412 Query: 539 ISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENR-------AKMPAHRFAINLSPTSVC 591 I P +FLPVA + L ID WVI++ A++ A+ + INLS S+ Sbjct: 413 ILPGNFLPVAERYHLMPMIDQWVIKNFFNHYAQHNKTSCFQTARQENIVYNINLSAVSLN 472 Query: 592 QARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTG 651 F + Q LA I L FE+TES+AL N QA++ + L++LGC++A+D+ GTG Sbjct: 473 NQEFLDFLRQQLACPPIPPQSLCFEITESSALANFSQAKLFMDTLKQLGCRLALDNVGTG 532 Query: 652 YASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIR 711 S LKN++ D LKI+ S I ++++DY V + M +AE+VE+ I Sbjct: 533 INSLTYLKNLSVDYLKINMSLI----TDAVDYTFVECFNRIGHALGMQTIAEFVEHPGIL 588 Query: 712 EAVLSLGIDYMQGYLIGKPQPL 733 E + S+GIDY+QGY I +P PL Sbjct: 589 EPLKSMGIDYVQGYSIAEPVPL 610 >UniRef50_Q67KG5 Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum RepID=Q67KG5_SYMTH Length = 712 Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 83/244 (34%), Positives = 139/244 (56%), Gaps = 2/244 (0%) Query: 489 ELKDKVAMMNRLQQALEHNHFFLMAQPITGMR-GDVYH-EILLRMKGENDELISPDSFLP 546 E+ K++ RL++AL + F L AQPI +R G + E+LLR+ E +I+P +FL Sbjct: 437 EMVAKLSWDRRLREALREDRFVLYAQPILDLRLGRITRVELLLRLVDEGGNVIAPGAFLA 496 Query: 547 VAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKY 606 A FGL ID WV+ ++ +A+ F +NLS ++ + + L Sbjct: 497 GAERFGLIQEIDRWVLREAIRLIAQQEPDSEIEAFEVNLSGKTISDPGLARMIQEELEAS 556 Query: 607 QIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLL 666 + +L+ E+TE+ A+ +++QA+ + ++ LGC+ A+DD G+G++S LK + D L Sbjct: 557 GADPSKLVLEITETAAIGDLEQARRFITAMRRLGCRFALDDVGSGFSSLRLLKQLPVDYL 616 Query: 667 KIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYL 726 KIDG+FIRN+ + D +V ++ +AR + +AE+V+ E V G+DY QGYL Sbjct: 617 KIDGAFIRNLPTEDADKHLVRAMVAMARTQGQQTIAEFVDRAETLRLVREFGVDYAQGYL 676 Query: 727 IGKP 730 +G+P Sbjct: 677 VGRP 680 >UniRef50_B0C150 Signal transduction protein containing an EAL domain, a PAS domain, a CBS domain pair and a GGDEF domain n=2 Tax=Bacteria RepID=B0C150_ACAM1 Length = 1405 Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 119/416 (28%), Positives = 201/416 (48%), Gaps = 41/416 (9%) Query: 342 RALNRALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLS 401 +AL A RD LCYL + +++ G + Q+++ + + + +L Sbjct: 998 KALQSAHRDQLQHVLCYLDLDQFKIVNDTCGHAAGDELLQQVAELFKHTIRSTDIIARLG 1057 Query: 402 GNDLALRLNTESHQERITALDSHLKQ----FRFFWDGMPMQPQIGVSYCYVRSPVNHIYL 457 G++ L L+ + ER + L+Q FRF W+ + + + +++ Sbjct: 1058 GDEFGLLLH-QCSIERAQVIAEQLRQRLQTFRFNWNQQAFSIGLSIGLVAINYDSHNLSS 1116 Query: 458 LLGELNTVAELSIVT----------NAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHN 507 L+ + + + E +Q+RG R R++QALE N Sbjct: 1117 LISAADAACYAAKARGRNRIHVYQLDDLELVQQRGTQRWSR----------RIKQALEEN 1166 Query: 508 HFFLMAQ---PITGMRGDVYH--EILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVI 562 F L Q P + +++ E+LLRM E D+++S +F+P A + L ID WVI Sbjct: 1167 RFRLYGQAIVPADPEQSEIHQCCEVLLRMVDEQDQVVSAATFIPAAERYNLMPEIDRWVI 1226 Query: 563 EHTLQFMAE--NRAKMPAHR------FAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLI 614 QF+ + N +MP + INLS S+ +F + + +Y A Q+ Sbjct: 1227 S---QFLVDHFNPPQMPKTGGDQPFPYMINLSGASIGDEQFLQFLQEQFQRYPHAAPQIC 1283 Query: 615 FEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIR 674 FE+TE+ A++N+ QA + L++LGC+ A+DDFG+G +S+A LK + D LKIDG FI Sbjct: 1284 FEITETAAISNLNQAITFINELKQLGCKFALDDFGSGLSSFAYLKTLPVDYLKIDGHFIE 1343 Query: 675 NIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKP 730 ++ ++ IV SI H+ + + +AE V + R+ + S+GIDY+QGY I P Sbjct: 1344 DMANDPATQAIVESINHIGHVMGLQTIAESVGDLSTRKQLQSMGIDYVQGYGIALP 1399 >UniRef50_B2JVY6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Burkholderia phymatum STM815 RepID=B2JVY6_BURP8 Length = 981 Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 126/445 (28%), Positives = 211/445 (47%), Gaps = 29/445 (6%) Query: 306 SFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL-----RDAPWSALCYLR 360 FI + + R +A+ R + LA DP+ L N + A+ ++ PW AL YL Sbjct: 502 GFIEGSLEDVTDRSKAIAR-LHFLAEHDPLTGLLNRLGIEHAIDRQSSQNGPW-ALAYLD 559 Query: 361 IPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITA 420 + ++ +G + + + L L P + ++ G++ L+ + Sbjct: 560 LDRFKVFNDLFGHGTGDEILRHVGARLVERLGPHVPIGRIGGDEFVCVLSNMT------- 612 Query: 421 LDSHLKQFRFFWDGMPMQP-QIGVSYCYVRSPVNHIYLLLGE--LNTVAELSIVTNAPEN 477 +D + + R D + P + VR + + GE L+ +A A + Sbjct: 613 IDEAIARCREIVDALNSAPVPVNTRAFQVRGSIGVVECTEGERVLDALAYADRACRAAKR 672 Query: 478 MQ-------RRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDVYH---EI 527 RRGA + E ++ ++ L Q FL+ QPI MR E+ Sbjct: 673 GGSARLVALRRGAPAFE-ERTAEINLIEALGQRRLPEGLFLVMQPIMSMREPTQALDFEV 731 Query: 528 LLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRF-AINLS 586 LLRM+ + + + + A + G ID WV+ TL ++++NRA + RF +NLS Sbjct: 732 LLRMRSPDGAVATAGKLIAAAEDSGTIVEIDRWVLSTTLAWLSDNRASLINTRFVCVNLS 791 Query: 587 PTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAID 646 S+ F E+ LL++Y+ L E+TES AL +++ + + + ++G +IAID Sbjct: 792 GGSLNDEHFLGELFDLLSRYEDVVHLLCIEITESVALHDLEHTERFIARVHDMGAKIAID 851 Query: 647 DFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVE 706 DFG G+ S LK ++AD LKIDG F+R + ++ D IV ++ LA M +AE+VE Sbjct: 852 DFGAGHTSLRYLKKLSADALKIDGEFVRTMCNHPADIAIVEAMISLAHNLGMRSIAEWVE 911 Query: 707 NEEIREAVLSLGIDYMQGYLIGKPQ 731 + E A+ LG+DY+QG+ I KPQ Sbjct: 912 DLETLRALDELGVDYVQGFAIAKPQ 936 >UniRef50_Q2SN89 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SN89_HAHCH Length = 1247 Score = 162 bits (411), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 111/353 (31%), Positives = 185/353 (52%), Gaps = 25/353 (7%) Query: 399 QLSGNDLALRLNTESHQERITALDSHLKQF---RFFWDGMPMQPQIGVSYCYVRSPVNHI 455 ++ GN+ AL ++ S + A + KQF RF + G + V + Sbjct: 903 RIGGNEFALLVSPASQDVALDAAERVCKQFSKHRF---------EAGEGHFSATLSVGVV 953 Query: 456 YLLLGELNTVAELSIVTNAPENMQRRGAMYLQ---RELKDKVAM------MNRLQQALEH 506 + G + A L+ + A + +R G ++ E +D+ ++R+ QA++ Sbjct: 954 MINGGGTDASAFLNHASLACRSAKRAGGSRVKLFLEEDRDQAFQQEVLHWVSRIDQAIDD 1013 Query: 507 NHFFLMAQPITGM---RGDVYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIE 563 +L AQ I M + ++EILL + +N + ISP +F+ + S ID WV++ Sbjct: 1014 CDLWLRAQRIQSMDKSSDEHFYEILLGLNDQNGKPISPAAFIEAGERYKRSIYIDRWVVD 1073 Query: 564 HTLQFMAENRAKMPA-HRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNA 622 + L +M N AK+ F INLS S+ F + K A ++ FE+TE+ A Sbjct: 1074 NVLSWMRANPAKLENMGGFTINLSGHSLSDDGFLEFLEGHFRKGGFPAQKVCFEITETAA 1133 Query: 623 LTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLD 682 + ++ ++ L+ GC+ A+DDFGTG++SYA L+++ D LKIDG F+R+I N + Sbjct: 1134 VASLHYTADFIRELKRTGCRFALDDFGTGFSSYAYLQSLPVDFLKIDGVFVRDIHENMTN 1193 Query: 683 YQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLID 735 Y +V SI L R M +AE VE+ E+ EA+ +G+D++QGY++GKP PL+D Sbjct: 1194 YAMVRSINELGRFMGMATIAECVESVEVLEALSEIGVDWVQGYIVGKPVPLLD 1246 >UniRef50_C5V3L4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V3L4_9PROT Length = 900 Score = 162 bits (411), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 134/468 (28%), Positives = 221/468 (47%), Gaps = 27/468 (5%) Query: 287 IYPGYTTQLTITSSSYLVFSFIVNYMAVLA--TRQRAVVRRIQRLAYVDPVVHLPNVR-- 342 IYP + T + + +V NY+ VL+ T+++A +I+ LA+ DP+ LPN R Sbjct: 419 IYPEHLTVTAVKDRNGMV----TNYVGVLSDLTQRKAAEEKIENLAFFDPLTKLPNRRLL 474 Query: 343 ------ALNRALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGED 396 A+ A R A+ ++ + + L YG + Q+++ L + G+ Sbjct: 475 LDRLKQAMASATRSVTNGAVLFIDLDNFKALNDTYGHPMGDLLLQQVAKRLVSSVRDGDT 534 Query: 397 VYQLSGNDLALRLNTESHQERITALDSHLKQFRFFWDGMPMQPQ-IGVSYCYVRSPV--- 452 V + G++ + L A + + F QP IG + S + Sbjct: 535 VSRFGGDEFVVLLEGFDENPLDAASQAETVGEQIF--AALRQPYLIGTHEYHGTSSIGAT 592 Query: 453 --NHIYLLLGELNTVAELSIVTNAPE--NMQRRGAMYLQRELKDKVAMMNRLQQALEHNH 508 N + EL A++++ E N+ R +Q + + A+ L++A+E++ Sbjct: 593 LFNDKQQSIDELMKQADIAMYQAKKEGRNVLRFFDPQMQETIAKRTALEGDLRKAIENHQ 652 Query: 509 FFLMAQ-PITGMRGDVYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQ 567 F L Q + R E L+R ++SPD F+P+A E L I WV+E Sbjct: 653 FQLHYQIQVDESRHPFGAEALIRWFHPEHGMVSPDQFIPLAEESDLILPIGYWVLETACA 712 Query: 568 FMA--ENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTN 625 + ++ AK ++N+S Q F +V L+ +Y+I L E+TES L N Sbjct: 713 RIQRWQHDAKTSGFVLSVNVSAKQFRQTDFVNQVQSLIQQYEINPSLLKLELTESMLLDN 772 Query: 626 VKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQI 685 ++ T+ L+ELG + ++DDFGTGY+S LK + D LKID SF+R+I ++ D I Sbjct: 773 IEDTIATMSALKELGVKFSLDDFGTGYSSLQYLKRLPLDQLKIDQSFVRDIAVDASDRAI 832 Query: 686 VASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPL 733 V +I +A + V+AE VE EE ++ + S G QGYL GKP P+ Sbjct: 833 VRTIIAMAHSLDLDVIAEGVETEEQQKHLSSKGCKNFQGYLFGKPVPI 880 >UniRef50_Q2SAB8 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SAB8_HAHCH Length = 966 Score = 162 bits (410), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 119/439 (27%), Positives = 224/439 (51%), Gaps = 30/439 (6%) Query: 317 TRQRAVVRRIQRLAYVDPVVHLPNV--------RALNRALRDAPWSALCYLRIPGMEMLV 368 T ++ +++ LA DP+ L N AL R+ AL ++ + +++ Sbjct: 536 TEKKENEQQLHYLARHDPLTGLLNRTEFEYRLNNALVRSREQGLQHALLFMDLDQFKIVN 595 Query: 369 KNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLAL---RLNTESHQERITALDSHL 425 G + ++++ L + + +L G++ + R E E L + + Sbjct: 596 DTSGHAAGDELLRQIAVMFRQHLRERDSLARLGGDEFGILLERCGIEKASEIAHRLRNEV 655 Query: 426 KQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQR----- 480 +FRF +GVS V P+ + E+ ++A+ + R Sbjct: 656 SEFRFALKEKVFS--VGVSIGIV--PITAATPSIEEIFSLADTACYAAKDAGRNRIIVHN 711 Query: 481 -RGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGM----RGDVYHEILLRMKGEN 535 + ++R+ ++ ++ LQ+A++ N L Q I + RG+ Y EIL+R+K + Sbjct: 712 EKTGEIIRRQ--SEMQVVTALQEAIKQNQLVLYKQNIGALKPELRGERY-EILVRLK-QG 767 Query: 536 DELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPA-HRFAINLSPTSVCQAR 594 +++ P +FLP A + + S+D WVI+ +++ ++ + INLS ++ + Sbjct: 768 ADILPPGAFLPAAERYNIIRSLDRWVIDAYFKWLHARPGQLERLSQVNINLSSQTINDSE 827 Query: 595 FPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYAS 654 F + KY I ++ FE+TES+A++++ + +Q+++ G + A+DDFG+G++S Sbjct: 828 FADFLLTAFTKYSIPLDKVCFEITESSAISSLVETTALVQNMRAKGIKFALDDFGSGFSS 887 Query: 655 YARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAV 714 Y+ LK++ + LKIDGSF+R+I+S+ +D +V SI +A + + VVAE+VENEE E + Sbjct: 888 YSYLKSLPVNSLKIDGSFVRDILSDPVDLAMVRSITEVAHIMGLNVVAEFVENEETVERL 947 Query: 715 LSLGIDYMQGYLIGKPQPL 733 SL +D++QGY I KP PL Sbjct: 948 KSLDVDFVQGYHIHKPMPL 966 >UniRef50_A9L3T6 Diguanylate cyclase/phosphodiesterase n=12 Tax=Shewanella RepID=A9L3T6_SHEB9 Length = 739 Score = 162 bits (409), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 112/362 (30%), Positives = 183/362 (50%), Gaps = 29/362 (8%) Query: 387 LSPLLEPGEDVYQLSGNDLALRL---NTESHQERITALDSHLKQFRFFWDGMPMQPQIGV 443 L L+ G+ V +L G++ + + N +S ++ + + L F W+G + + Sbjct: 362 LKQLVRKGDIVARLGGDEFGILMHYCNVDSAKQIAKRICTQLANHEFIWEGRSHNVSVSM 421 Query: 444 SYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQ- 502 + IY ++ + + L+ Q R +L K MNRL Sbjct: 422 GIAKLDKKAADIYTVMSQADAACRLA-------KDQGRNGWHLYSASDPK---MNRLYTE 471 Query: 503 ---------ALEHNHFFLMAQ---PITGMRGDVYHEILLRMKGENDELISPDSFLPVAHE 550 AL N F L Q P+ ++ EILLRM N ++SP FLP A Sbjct: 472 MMASVDIVGALALNQFELYFQSIVPLNREESGLHLEILLRMVQANGTIVSPAIFLPAAER 531 Query: 551 FGLSSSIDMWVIEHTLQFMAEN-RAKMPAHRFAINLSPTSVCQARFPVEVS-QLLAKYQI 608 + L+S +D+WVI++ L++ + ++NLS TS+ F + +L+A+ ++ Sbjct: 532 YNLASKVDLWVIDNLLKWGGCHLDIWQQLDLVSVNLSATSLGDFEFMNWLEMRLMAEPEL 591 Query: 609 EAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKI 668 +L E+TE+ A++ + QA L L+ L C++A+DDFG G++S+A LK +N D +K+ Sbjct: 592 -VDKLCIEITETAAVSQLDQATKLLDILRPLNCKLALDDFGAGFSSFAYLKRLNVDFVKV 650 Query: 669 DGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIG 728 DG F+ NI +S D IV SIC L + VVAE+VE+++I + +LG+DY QGY I Sbjct: 651 DGQFVVNICEDSADQAIVKSICQLGQDMGFDVVAEFVESQDIGRKLQTLGVDYAQGYAIN 710 Query: 729 KP 730 KP Sbjct: 711 KP 712 >UniRef50_UPI0001AEBED2 PAS sensor diguanylate cyclase and phophodiesterase n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEBED2 Length = 992 Score = 162 bits (409), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 89/251 (35%), Positives = 149/251 (59%), Gaps = 17/251 (6%) Query: 496 MMNRLQQALEHNHFFLMAQPITGMR-------GDVYH-EILLRMKGENDELISPDSFLPV 547 +++ L AL+++ F L +Q I + + H EILLR+ ++ LISP F+P+ Sbjct: 733 VLHALHHALQNDGFELYSQAIMPLNVPNQEKAAQLQHYEILLRLHAKDSGLISPGLFIPL 792 Query: 548 AHEFGLSSSIDMWVIEHTLQFMAENRAKMPAH-----RFAINLSPTSVCQARFPVEVSQL 602 A GL + +DMWV+E+TL+ + N PAH + AINLS ++ ++++ Sbjct: 793 AERHGLMNKVDMWVVENTLKTLERN----PAHIDTVGKVAINLSGITLGDEMALHKIAKR 848 Query: 603 LAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVN 662 + + A ++ FE+TE+ A+TN+ A+ + L++LGC A+DDFG G +S+ LKN++ Sbjct: 849 MQSTSVPAEKICFEITETTAVTNLSAAKHFISTLRDLGCSFALDDFGAGMSSFTYLKNLD 908 Query: 663 ADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYM 722 D +KIDGSF+RNIV + +D+ V +I ++A VAE+V + E + L +D+ Sbjct: 909 VDYVKIDGSFVRNIVHDPIDHATVTAINNIAHSMGKQTVAEFVVDNATAEVLRELKVDFG 968 Query: 723 QGYLIGKPQPL 733 QG+ + KP+PL Sbjct: 969 QGFALDKPKPL 979 >UniRef50_A3QHP3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Shewanella loihica PV-4 RepID=A3QHP3_SHELP Length = 731 Score = 161 bits (408), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 128/425 (30%), Positives = 216/425 (50%), Gaps = 35/425 (8%) Query: 333 DPVVHLPNVRALNRALRDAPWSALC-------YLRIPGMEMLVKNYGIMLRIQYKQKLSH 385 DP+ LPN RA AL D C ++ + +++ G Q +L+ Sbjct: 301 DPLTGLPN-RAYFEALYDLANPCQCERSTFVGFINLDRFQVVNNVSGHRAGDQLLCQLAA 359 Query: 386 WLSPLLEPGEDVYQLSGNDLALRLNT------ESHQERIT-ALDSHLKQFRFFWDGMPMQ 438 LS L+ + + +LSG++ + + E ERI A+ +H F W+G Sbjct: 360 RLSQLVRKEDVIARLSGDEFGILMPNIDVQIAEQVAERICQAMANH----EFSWEGRSHS 415 Query: 439 PQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPE----NMQRRGAMYLQRELKDKV 494 + + S V+ + LL + L+ + Q L E+ V Sbjct: 416 VSVSMGLARCESEVDSVSDLLRRASAACRLAKEKGGNAWYFYSTQDPVVEKLNTEMSASV 475 Query: 495 AMMNRLQQALEHNHFFLMAQPITGM--RGDVYH-EILLRMKGENDELISPDSFLPVAHEF 551 ++ AL ++ F L QPI + D H EILLRM+ ELI P FLP A F Sbjct: 476 DIVG----ALANDRFELFYQPIEPLYASDDGLHLEILLRMRSTEGELIPPGIFLPAAERF 531 Query: 552 GLSSSIDMWVIEHTLQFMAENRAKMPA-HRFAINLSPTSVCQARFP--VEVSQLLAKYQI 608 L++ +D WVI+ L++ +EN A + ++NLS S+ + F +E+ +LL + ++ Sbjct: 532 NLAAKLDRWVIDKLLRWGSENLALWQSLSMVSVNLSALSISDSEFINWLEM-RLLGEPEL 590 Query: 609 EAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKI 668 + +L FE+TE+ A++ + A + ++ LGC++A+DDFG+G++S+A LK ++ D +KI Sbjct: 591 VS-KLCFEITETAAVSQLDHATGLINTVKPLGCKLALDDFGSGFSSFAYLKLLDVDYVKI 649 Query: 669 DGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIG 728 DG FI+++ + D IVA+IC L R +VAE+VE+ E+ + + LG+++ QGY I Sbjct: 650 DGQFIQHLCEDRADQAIVAAICQLGRDMAFEIVAEFVESVEVAKHLQKLGVEFGQGYGIA 709 Query: 729 KPQPL 733 +P+ L Sbjct: 710 RPESL 714 >UniRef50_C6NZZ7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Bacteria RepID=C6NZZ7_9PROT Length = 1152 Score = 161 bits (408), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 131/449 (29%), Positives = 216/449 (48%), Gaps = 26/449 (5%) Query: 315 LATRQRAVVRRIQRLAYVDPVVHLPNVR--------ALNRALRDAPWSALCYLRIPGMEM 366 + R+RA I+ LA+ DP+ HLPN R AL + R AL ++ + + Sbjct: 698 ITDRKRAE-EEIKSLAFYDPLTHLPNRRLLVDRLQHALASSTRSGREGALLFIDLDNFKT 756 Query: 367 LVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQ--ERITALDSH 424 L G + Q+++ L+ + G+ V +L G++ + L S Q E +S Sbjct: 757 LNDTLGHDIGDLLLQQVALRLASCVREGDTVARLGGDEFVVMLEELSEQTLEAAAQTESI 816 Query: 425 LKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAEL----SIVTNAPENMQR 480 ++ + QP + ++ Y SP L + ++ EL I + R Sbjct: 817 GEKILLTLN----QPYLLAAHEYRNSPSIGATLFGNKPQSIEELLKQADIAMYQAKKAGR 872 Query: 481 RGAMYLQRELKDKV---AMMNR-LQQALEHNHFFLMAQ-PITGMRGDVYHEILLRMKGEN 535 + ++++ V A++ R L +ALE++ F L Q +T + E L+R Sbjct: 873 NTLRFFDPQMQETVIARALLERELSKALENDQFQLYYQIQMTDLNEPFGAEALIRWIHPE 932 Query: 536 DELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMA--ENRAKMPAHRFAINLSPTSVCQA 593 LI P+ F+P+A E GL I +WV++ + E A A+N+S S Q Sbjct: 933 RGLIPPNHFIPLAEEVGLILPIGLWVLDTACNQIKIWEKNASTRELVLAVNVSARSFFQD 992 Query: 594 RFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYA 653 F ++ +L ++ I +L E+TES L +++Q + L++LG Q A+DDFGTGY+ Sbjct: 993 DFVTQIQTVLQRHAINPKRLKLEITESMMLNSIEQTIEKMNALKKLGVQFAMDDFGTGYS 1052 Query: 654 SYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREA 713 S LK + D LKID SF+R+I ++S D IV +I +A + V+AE VE E+ R+ Sbjct: 1053 SLQYLKRLPLDQLKIDQSFVRDIATDSSDKAIVTTIVAMAHSLNLDVIAEGVETEQQRQL 1112 Query: 714 VLSLGIDYMQGYLIGKPQPLIDTLNEIEP 742 ++ G QGYL GKP P+ ++P Sbjct: 1113 LIESGCSQYQGYLFGKPAPIRQFEESLKP 1141 >UniRef50_Q7MQJ2 GGDEF family protein n=2 Tax=Vibrio vulnificus RepID=Q7MQJ2_VIBVY Length = 753 Score = 161 bits (408), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 137/458 (29%), Positives = 224/458 (48%), Gaps = 31/458 (6%) Query: 300 SSYLVFSFIVNYMAVLATRQRAVVRR---IQRLAYVDPVVHLPNVR----ALNRALRD-- 350 S + F F Y+ + Q AV ++ +++LA D + L N R LN+ L+ Sbjct: 295 SGFASFCFFY-YVTLPKKLQHAVEQKTFQLKKLANTDMLTGLDNRRKFTDVLNQILQKPD 353 Query: 351 --APWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALR 408 A AL YL I + + G + Q + ++ L + + + ++SG++ A+ Sbjct: 354 ALAHCHALLYLDIDNFKQINDQLGHYVGDQVLKVVAQRLCHHVSDAQSITRISGDEFAVL 413 Query: 409 LN---TESHQERITALDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTV 465 L +S + R++AL L Q + +P ++ VS V P + L L + Sbjct: 414 LEYQEIDSLKARLSALIVALSQPS---EHIPNSHRLTVSIGVVLIPQDGQDLTL----LM 466 Query: 466 AELSIVTNAPENMQRRGAMYLQRELK----DKVAMMNRLQQALEHNHFFLMAQPITGMRG 521 + ++ R + R +K +K+ ++ L+ A+E N F L QPI +R Sbjct: 467 QHVDFAMYQAKSQGRNQYCFFDRLMKLRDDEKIQLIESLKIAIEQNQFVLHYQPIYDIRS 526 Query: 522 DVYH--EILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAH 579 H E L+R + L+ P SF+ +A + GL + I V+ QF+A+ + P Sbjct: 527 HQIHCYEALIRWQHPTKGLLFPASFIELAEQSGLINEIGDCVLAQACQFIAQTAQEKPI- 585 Query: 580 RFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQEL 639 +IN+S + + + ++ +Y ++A L FE+TE+ + N++ L ++L Sbjct: 586 -VSINISASQLSDPQLFERFIGIIQQYGVDAHSLKFELTETTLMQNIQSCTNILLKFKQL 644 Query: 640 GCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKML 699 G QIAIDDFGTGY+S A LK+V A+ LKID SFI I SN+ D ++ SI LA M Sbjct: 645 GIQIAIDDFGTGYSSLAVLKDVPANYLKIDKSFIDQINSNTGDQKVAQSIITLAHHLDMQ 704 Query: 700 VVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTL 737 V+AE VE E E + D+ QGYL G+P P +D+L Sbjct: 705 VIAEGVEQIEQEELLAQFQCDFGQGYLFGRPAP-VDSL 741 >UniRef50_A8GZL9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Shewanella RepID=A8GZL9_SHEPA Length = 857 Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 126/442 (28%), Positives = 216/442 (48%), Gaps = 38/442 (8%) Query: 317 TRQRAVVRR-IQRLAYVDPVVHLPNVRALNRALRDAPWS----ALCYLRIPGMEMLVKNY 371 T Q A+++R +QR +Y+DPV L N S A+ YL + +++ + Sbjct: 415 TTQEALLKRQLQRQSYLDPVTGLLNRTTFEERFMGYAQSSQSLAVVYLDLEQFKLINDSS 474 Query: 372 GIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLKQFRFF 431 G + + +K++ + L + ++ G++ L + R ++ + K + Sbjct: 475 GHAIGNKMLKKVARVIESCLSDNMLLGRIGGDEFGLIV-------RDSSALAVAKLIKKI 527 Query: 432 WDGMPMQP--------QIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGA 483 G+ Q ++GVS S VN LLG L A+++ + +R+G Sbjct: 528 IAGVGCQTVTHNDTCYRVGVSVGVALSRVNKDTDLLGLLKD-ADIACLA-----AKRKGC 581 Query: 484 ----MYLQREL-----KDKVAMMNRLQQALEHNHFFLMAQPITGMRGDVYH---EILLRM 531 Y R++ ++ R+ QA+EHN L Q I + + EILLR+ Sbjct: 582 NQVHFYDGRDIDLSYQRNAPKWAVRIVQAIEHNELILYYQKIKCLSSHSHRQRLEILLRI 641 Query: 532 KGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVC 591 + ++ P F+ A F L +D VI T +++ N H +INLS +S+ Sbjct: 642 QEPGGRILPPAQFIAAAESFKLIVDVDKEVIRKTFLWLSLNEGLWDDHCLSINLSGSSLG 701 Query: 592 QARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTG 651 + ++ + + + FE+TE++A+ N +A L L++ G A+DDFG+G Sbjct: 702 AEGMVDFILSQQKRFGVPSSCICFEITETSAIQNRSRAMKMLLDLRKRGFAFALDDFGSG 761 Query: 652 YASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIR 711 +ASY LK + D +KIDG F++N+ SN+ DY IV S+ + R+ + VAE+VEN+EI Sbjct: 762 FASYGYLKEMPVDYVKIDGCFVKNLASNAKDYAIVKSVNDVCRVMGIETVAEFVENQEII 821 Query: 712 EAVLSLGIDYMQGYLIGKPQPL 733 + + +GI+Y QGY IG+PQPL Sbjct: 822 DKLEVIGINYAQGYGIGRPQPL 843 >UniRef50_A4XVP2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pseudomonas mendocina ymp RepID=A4XVP2_PSEMY Length = 770 Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 123/422 (29%), Positives = 205/422 (48%), Gaps = 27/422 (6%) Query: 330 AYVDPVVHLPNVRALNRALRDAPWSALCYLRIPGMEMLVKNYG-----IMLRIQYKQKLS 384 +Y DP+ LPN L L+ P +L L + + + YG MLR Q L Sbjct: 357 SYTDPLTQLPNRARLLLDLQRTPRPSLILLNLDAFKEINGFYGHACGDQMLRHLGAQLLQ 416 Query: 385 HWLSPLLEPGEDVYQLSGNDLAL---RLNTESHQERITALDSHLKQFRFFWDGMPMQPQI 441 H L +Y+L+ ++ A+ RL+ E+ + R+ L + +++ R W G ++ Sbjct: 417 HLR--LEADSARLYRLTADEFAVLLPRLSDEALEARMNELGTFIQRQRLDWQGQ----EV 470 Query: 442 GVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMY-----LQRELKDKVAM 496 G + + + ++ G + +A +I QR +Y ++ E + + Sbjct: 471 GFNATFGAARLSAGEARQGRDSLLASATIALKLARLQQRNHLLYDPALKIREEYEQNLLW 530 Query: 497 MNRLQQALEHNHFFLMAQPITGMRGDV--YHEILLRMKGENDELISPDSFLPVAHEFGLS 554 N+++ AL+ + QPI G E L+RM ++ ++I+P FL VA + L Sbjct: 531 ANKVKTALQEDRLLPHFQPILDNHGGSIGKFECLVRMLDDDGQVINPGRFLGVAKKIRLH 590 Query: 555 SSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLI 614 I ++E L+ R + + F+INLS + + + + L ++ +LI Sbjct: 591 RQITRVMLEKCLE-----RFRDLPYEFSINLSYEDLIDPQLSQTIKEQL-QHSGMGPRLI 644 Query: 615 FEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIR 674 FE+ ES + N Q + + ++ LGC+IAIDDFGTGY+++ L +N DL+KIDGS IR Sbjct: 645 FEILESEGIDNYSQVRTFIDEVKALGCRIAIDDFGTGYSNFEHLLRLNVDLIKIDGSLIR 704 Query: 675 NIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLI 734 + S+ + I AR M VAE+V + ++E VL+LGIDY QG IG PQ + Sbjct: 705 QLDSDPNALAVTLGIVQFARSLGMQTVAEFVHSAAVQEKVLALGIDYSQGQHIGMPQAQL 764 Query: 735 DT 736 T Sbjct: 765 QT 766 >UniRef50_D0L072 Diguanylate cyclase/phosphodiesterase n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L072_HALNC Length = 737 Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 134/490 (27%), Positives = 237/490 (48%), Gaps = 57/490 (11%) Query: 281 YQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQ----RAVVRRIQRLAYVDPVV 336 + +I + GY + + + + FI +AV++T R + + R +DP+ Sbjct: 262 FNAHINLLHGYNASMLLGDQALI---FIAALLAVISTEMVQAYRLSEKSLARQLLIDPLT 318 Query: 337 HLPNVRALNRALRDAPWSALCYLR--------IPGMEMLVKNYG------IMLRIQY--- 379 L N L++ L+ P ++ IP +E + G + LR+ Sbjct: 319 GLQNDMGLSQRLQAWPKDRTGAMQPMIVIGVHIPELEQIDALMGHEESNQVELRLSQILR 378 Query: 380 KQKLSHWLSPLLEPG-------EDVYQLSGNDLALRLNT--ESHQERITALDSHLKQ-FR 429 K+KLS + S + PG V + G D+A +L E +++ A +L+ F Sbjct: 379 KEKLSDYASRV-RPGVFILCLTSAVMGMRGADVAQKLKDRIEFEWKKMGAGARYLQAGFT 437 Query: 430 FFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRE 489 F + +G+ V L G ++A+ + + + +N+ + +Q Sbjct: 438 VF--NLAQTRDLGLLTSAV---------LAGCQLSLADRNQLVHVEDNLDSLLSHRVQ-- 484 Query: 490 LKDKVAMMNRLQQAL----EHNHFFLMAQPITGMRG-DVYH-EILLRMKGENDELISPDS 543 ++ + R++ AL + F L AQ I R DV E+LLR + ++ ++ P Sbjct: 485 ---ELTWVQRMRAALVGDTQAGQFILFAQTIRDTRHPDVKAFEVLLRWQDADENVLPPSE 541 Query: 544 FLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLL 603 FLP+A +GL ++ID+WV+ L+ +A++ + + +INLS S+ E+ Q L Sbjct: 542 FLPIAERYGLMTAIDLWVMRSALEQLAQSPWRAEISKVSINLSGASLADPNLIHEIEQQL 601 Query: 604 AKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNA 663 A Q+ FE+TE+ + + K A+ + ++ELGC+I++DDFGTG ++++ LK Sbjct: 602 KSCGCRAEQICFEITETMVIADTKLARQAVLGIKELGCKISLDDFGTGLSTFSYLKRFPF 661 Query: 664 DLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQ 723 D LKIDG F+R+I + +D IV SI +A + VAE+VEN + E + +G+ Y Q Sbjct: 662 DYLKIDGEFVRHITESRIDRAIVESIQAIAFEMNTITVAEFVENIDQMETLRQIGVYYHQ 721 Query: 724 GYLIGKPQPL 733 GY + KP P+ Sbjct: 722 GYGVAKPVPI 731 >UniRef50_A3JH20 PAS sensor diguanylate cyclase and phophodiesterase n=2 Tax=Marinobacter RepID=A3JH20_9ALTE Length = 295 Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 92/253 (36%), Positives = 143/253 (56%), Gaps = 8/253 (3%) Query: 497 MNRLQQALEHNHFFLMAQ----PITGMRGDVYHEILLRMKGENDELISPDSFLPVAHEFG 552 +NR+Q AL+ N FFL AQ + G RG + +E+L+R+K + + I P +FLP A FG Sbjct: 40 LNRIQVALQENRFFLDAQLIAPTVKGGRG-LRYEVLVRLKDKEGKTIPPGAFLPAAERFG 98 Query: 553 LSSSIDMWVIEHTLQFMAENRAKMPA-HRFAINLSPTSVCQARFPVEVSQLLAKYQIEAW 611 ++ ID WVI + +A + A + INLS S Q F V + L Y + Sbjct: 99 IAHKIDRWVINEVFRQLAAHTAHLNELDACHINLSGRSFDQPDFAEFVIERLQHYGLSGG 158 Query: 612 QLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGS 671 ++ FE+TE+ A+ N AQ + L + C A+DDFGTG +S++ L+ + D LKIDG Sbjct: 159 KICFELTETAAIHNFADAQNFMALLGDSKCSFALDDFGTGLSSFSYLRRLPVDYLKIDGV 218 Query: 672 FIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQ 731 F+R+I ++ D +V +I + + + +AE+VEN E E + +G+D+ QGY + +P Sbjct: 219 FVRDIATDQTDLAMVRAINDIGKTLQKKTIAEFVENNETLELLKEMGVDFAQGYGLHRPC 278 Query: 732 PLIDTL--NEIEP 742 D L N +EP Sbjct: 279 RFQDMLSGNVVEP 291 >UniRef50_A6W0Q6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W0Q6_MARMS Length = 594 Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 118/365 (32%), Positives = 186/365 (50%), Gaps = 27/365 (7%) Query: 387 LSPLLEPGED-VYQLSGNDLAL---RLNTESHQERITALDSHLKQFRFFWDGMPMQ---P 439 +S L +P D +LSG+ A+ + E+ + L K F F WD + Sbjct: 239 MSELADPQRDFCARLSGDKFAIVISKGGDEAVESFFRLLQKGFKDFSFVWDERQFRMTVT 298 Query: 440 QIGVSYCYVRSPVNHIYLLLGELNTVAELS-----IVTNAPENMQRRGAMYLQRELKDKV 494 Q+ + + +L E+ ++ S I+ NA + E + + Sbjct: 299 QVAIPITLDMVSFEQVVMLADEICYSSKKSGIHSRIIKNAKD--------LAYDEHRGNL 350 Query: 495 AMMNRLQQALEHNHFFLMAQPITGMRGDVYH---EILLRMKGEN-DELISPDSFLPVAHE 550 R+ L+ + F + Q + + D EIL+R+K E LI P+ F+ A Sbjct: 351 NWGLRIIDGLDKDLFEVHFQQVCSLINDEPKKKIEILVRLKDEETGGLIYPNDFIRAAER 410 Query: 551 FGLSSSIDMWVIEHTLQFMAENRAKM--PAHRFAINLSPTSVCQARFPVEVSQLLAKYQI 608 FG+ S ID WVI +T+Q +AE RA + + A+N+S SV QA F + + L YQ+ Sbjct: 411 FGIVSKIDRWVISNTMQQLAE-RAGLWDEIDQVALNVSALSVRQANFAEFIIEQLKYYQL 469 Query: 609 EAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKI 668 + + FE+TE+ AL N + + L E GC IA+DDFGTG++S+A L ++ DL+KI Sbjct: 470 DGSKFCFEITETEALNNFSDTRRFMSLLHEHGCTIALDDFGTGFSSFAYLMDLPFDLIKI 529 Query: 669 DGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIG 728 DG FI+++ N + Y +V SI LA+M VVAE+VEN+ I + + LG+++ QGY Sbjct: 530 DGMFIKDMHVNEIHYGMVDSIVKLAKMLNKPVVAEFVENQSIVDKLKLLGVEWGQGYFFH 589 Query: 729 KPQPL 733 KP+ L Sbjct: 590 KPEKL 594 >UniRef50_Q6LLM3 Hipothetical sensory box/GGDEF family protein n=4 Tax=Vibrionaceae RepID=Q6LLM3_PHOPR Length = 1052 Score = 159 bits (402), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 88/258 (34%), Positives = 150/258 (58%), Gaps = 6/258 (2%) Query: 487 QRELKDKVAMMNRLQQALEHNHFFLMAQ---PITGMRGDVYHEILLRMKGENDELISPDS 543 +REL+ + +N + +AL F L AQ P+ ++EIL+RM+ + ++SP Sbjct: 789 RRELE--MEYVNHIHKALAEQRFELHAQQIAPVASGSTKQHYEILVRMRNSDGSMVSPGL 846 Query: 544 FLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRF-AINLSPTSVCQARFPVEVSQL 602 F+P A + ++ ID +V++ ++++ N+ + +INLS S+ F + + Sbjct: 847 FMPAAERYNIAHLIDRYVVKGVIEWLQANKEAVEKLELCSINLSGQSMGNRDFVGFLIEQ 906 Query: 603 LAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVN 662 + + +L E+TE+ A+ N+ +A L+ LGC IA+DDFG+G +S+ LK + Sbjct: 907 IRDSGLPPSKLCLEITETAAIGNMSEAIQLFTQLKNLGCLIALDDFGSGLSSFGYLKRMP 966 Query: 663 ADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYM 722 D++KIDG F+R+I + +D+ +V +I LA+ VAE+VENE I + SLG+DY Sbjct: 967 VDIIKIDGMFVRDIAEDEMDFAMVKAINELAKKMGKRTVAEFVENEAILMRLQSLGVDYA 1026 Query: 723 QGYLIGKPQPLIDTLNEI 740 QGYL GKP+PL + + E+ Sbjct: 1027 QGYLFGKPKPLAELVAEL 1044 >UniRef50_Q31DY5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31DY5_THICR Length = 671 Score = 159 bits (402), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 112/382 (29%), Positives = 198/382 (51%), Gaps = 35/382 (9%) Query: 383 LSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERI-----TALDSHLKQFRFFWDGMPM 437 ++H +L + ++ G+D + L +H E+I L HL FRF W+G Sbjct: 297 VAHSCQDMLPDSVSMARIGGDDFYILL--PNHSEKIGKAIAETLLEHLSDFRFSWEGQAY 354 Query: 438 QPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRE----LKDK 493 + + P + L EL A+ + + + + + E K + Sbjct: 355 SVSASIGMVAFK-PFEYT---LEELVKAADSAFYSAKSAGRNKLHIFHSEDEESQYYKHE 410 Query: 494 VAMMNRLQQALEHN----------HFFLMAQPITGM----RGDVYHEILLRMKGENDELI 539 V + + +++AL +F L AQ IT + R +V +EIL+R++ LI Sbjct: 411 VQIASYIKEALAQGASPTPSKNTAYFELFAQGITPLQHNNRDEVSYEILIRLRDVKGNLI 470 Query: 540 SPDSFLPVAHEFGLSSSIDMWVIEHTL---QFMAENRAKMPAHRFAINLSPTSVCQARFP 596 +PD+FLP A + + + ID +V+ L Q + + K+ H+ INL+ +S+ A F Sbjct: 471 APDAFLPTAERYQMMADIDGFVLTQYLNRVQSLPTHLTKL--HKAHINLAGSSLNNADFQ 528 Query: 597 VEVSQLLAKYQIEAW-QLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASY 655 + QL++++ W +L E+TE++A+ N QA +Q+ Q LG +A+DDFGTG +S+ Sbjct: 529 ARLKQLVSEHPHFPWRKLELEITETSAVGNFNQAMPFIQYCQALGIGLALDDFGTGMSSF 588 Query: 656 ARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVL 715 LK++ D++KIDGSF++++ S+ D ++ I ++ ++ VAEYVE +E + + Sbjct: 589 EYLKSLPFDVIKIDGSFVKDMHSDPSDKAVIRYIQEISALRNQETVAEYVETQEDVDVLT 648 Query: 716 SLGIDYMQGYLIGKPQPLIDTL 737 +GI Y QGY +G+P+PL + L Sbjct: 649 EIGITYGQGYFLGRPKPLTEWL 670 >UniRef50_C6XCG6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XCG6_METSD Length = 674 Score = 158 bits (400), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 105/351 (29%), Positives = 181/351 (51%), Gaps = 16/351 (4%) Query: 399 QLSGNDLALRL---NTESHQERITALDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHI 455 +L G++ A+ L ++++ + + + ++ FRF + Q + VS ++H Sbjct: 328 RLGGDEFAILLLCCDSDAAGKIADDICNRIEAFRFAHE----QKRFHVSASIGLVRIDHQ 383 Query: 456 YLLLGELNTVAELSIVTNAPENMQR----RGAMYLQRELKDKVAMMNRLQQALEHNHFFL 511 + + L +A + T E R R + ++ +++ +NRL+ ALE N F L Sbjct: 384 WQDISALLQIANAACYTAKQEGRNRTHLYRDTDFAIKKHHEEIQWVNRLELALEENRFSL 443 Query: 512 MAQ---PITGMRGDVYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQF 568 Q P+ G ++ EILLR+ N +I +F+P A F ++S ID WV + L + Sbjct: 444 YCQRILPLNENSG-IHGEILLRLPDGNGGMIPAGAFMPAAERFHITSRIDRWVTKRVLHW 502 Query: 569 MAENRAKMPA-HRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVK 627 + ++ + ++N+S S+ F + +L+ +L FE+TE+ A+TN+ Sbjct: 503 LMQHEHVIDHIDVLSVNISGQSIGDRAFHDYMLELIVSTPATYSKLCFEITETAAITNLA 562 Query: 628 QAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVA 687 A + ++ G + ++DDFG+G +S+ LKN++ D LKIDG FIR I SN +D +V Sbjct: 563 DANSFIASMRRFGIRFSLDDFGSGVSSFGHLKNLDVDYLKIDGQFIRAIDSNVIDQAMVR 622 Query: 688 SICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLN 738 IC +A + +AEYVE E+ + +GI Y QGYL KP PL + L Sbjct: 623 CICEIANGTGLKTIAEYVETVEVENLLRGMGIHYTQGYLRHKPAPLDEMLK 673 >UniRef50_A4G5U9 Putative uncharacterized protein n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G5U9_HERAR Length = 709 Score = 158 bits (400), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 118/454 (25%), Positives = 212/454 (46%), Gaps = 34/454 (7%) Query: 305 FSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRDA--------PWSAL 356 F F+ N + +++ I A D + L N R R L+ A + Sbjct: 253 FEFLSNVIREAKQKEQEKQIEISYQASHDELTGLINRREFERCLQSALHDIRTQHGTHTI 312 Query: 357 CYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQE 416 Y+ + +++ G Q+L+ L L + + +L G++ + L + Sbjct: 313 LYMDLDQFKIVNDTCGHHAGDILLQQLTRVLKEKLRQNDILARLGGDEFGVLLRNCPAEP 372 Query: 417 RITALDS---HLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTN 473 + +S +FRF W+ +GVS + + EL+ LSIV Sbjct: 373 ALNVAESLRQTASEFRFAWNDKLFS--VGVS-------IGLLTFSDDELSLNEILSIVDG 423 Query: 474 APENMQRRGAMYLQ---------RELKDKVAMMNRLQQALEHNHFFLMAQPIT----GMR 520 A + +G + E K ++ + ++ ALE N L Q I + Sbjct: 424 ACYLAKEKGRNRIHVCHPDDGELSERKSQMGWVAKISNALEENRMVLFKQTIAPLQLSQQ 483 Query: 521 GDVYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAE-NRAKMPAH 579 ++ E+LLRM E +L+ P FLP A + L + ID WVI+ + + A+ Sbjct: 484 KIIHFEVLLRMLDEEGKLLPPSFFLPAAERYNLMTRIDFWVIKTAFSYYRDFCTDPAVAY 543 Query: 580 RFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQEL 639 +INLS +V R + + Y I + FE+TE+ A+ N+ +A +Q LQ++ Sbjct: 544 TCSINLSGATVGDERLIAYIREQFQAYGISPAGICFEITETAAIANLDRAVTLMQDLQQI 603 Query: 640 GCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKML 699 GC+ A+DDFG+G +S+ LK + + +KIDGSF+++++ + +D +V +I ++ + + Sbjct: 604 GCRFALDDFGSGMSSFGYLKKLPINYIKIDGSFVKDMLHDRIDRAMVEAINNIGHVMGIQ 663 Query: 700 VVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPL 733 +AE+VE+E+ A+ + +++ QGY IGKP+PL Sbjct: 664 TIAEFVEDEKTMIALQEMNVNFAQGYGIGKPEPL 697 >UniRef50_B5JW24 PAS sensor diguanylate cyclase and phophodiesterase n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JW24_9GAMM Length = 796 Score = 158 bits (399), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 111/409 (27%), Positives = 212/409 (51%), Gaps = 30/409 (7%) Query: 344 LNRALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGN 403 + RA D AL YL + +++ G + + ++L+ L + G+ + +L G+ Sbjct: 393 VERAHVDDSGHALLYLDLDQFKIINDTCGHVAGDELLRQLAGLLKHKVRKGDTLARLGGD 452 Query: 404 DLALRLN--TESHQERIT-ALDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLG 460 + + + T ER+ + + F+FFW + + + + S ++ Sbjct: 453 EFGVLVENCTMEDAERLAQTMCDVVASFQFFWGVSSFRIGVSIGLASIASGSGDYADIMS 512 Query: 461 ELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAM-------MNRLQQALEHNHFFLMA 513 + ++ A +++ R +++ RE ++A +++++ LE + F L Sbjct: 513 QADSAC------YAAKDLGR-NRVHIYRENDAELARRFGEMQWVSKIESTLEQDRFELYF 565 Query: 514 QPI---TGMRGDVYH-EILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFM 569 QPI R D H E+L+RM+ + ++ P SF+ A + L ID V+ TL+++ Sbjct: 566 QPIVPIDNTRLDGRHYEVLVRMRDVDGNIVPPASFMSAAERYNLMGRIDRKVVSQTLRWL 625 Query: 570 AENRAKMPAH-----RFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALT 624 + + P H ++NLS ++ F + L ++ ++ +L FEVTE+ A+ Sbjct: 626 SLH----PDHLKNLSVCSVNLSGQTLMDDDFLEFIFDELKQWNVDPRKLCFEVTETAAIE 681 Query: 625 NVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQ 684 N+ +A ++ L++ GC+ ++DDFG+G +S+A LKN+ D +KIDG F+R+IV + +DY Sbjct: 682 NLTKASDFIRSLKDRGCKFSLDDFGSGLSSFAYLKNLPVDYIKIDGLFVRDIVKDPIDYS 741 Query: 685 IVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPL 733 +V SI +A++ VAE+VE+E I A+ ++G+DY QGY I + QP+ Sbjct: 742 MVRSINEIAQVMGKKTVAEFVEDELILNALRNIGVDYAQGYYISRDQPI 790 >UniRef50_C0N6V7 Cyclic diguanylate phosphodiesterase domain protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N6V7_9GAMM Length = 605 Score = 158 bits (399), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 88/248 (35%), Positives = 141/248 (56%), Gaps = 7/248 (2%) Query: 490 LKDKVAMMNRLQQALEHNHFFLMAQPITGM-RGDVYH-EILLRMKGENDELISPDSFLPV 547 L+ V R++ AL+ +F L QPI + G + H E L+RM+G+ + P F+PV Sbjct: 358 LRHSVEWAPRIRAALKEENFLLEFQPIFALDSGAITHYECLIRMRGDGGVVYYPKEFIPV 417 Query: 548 AHEFGLSSSIDMWVIEHTLQFMAENRAKMPAH-RFAINLSPTSVCQARFPVEVSQLLAKY 606 A GL ID WV+ + MP FA+NLS + Q L + Sbjct: 418 AEAMGLIHQIDFWVVAKAFDLLC----GMPDSISFAVNLSGNVFLDENLYRLIQQKLKET 473 Query: 607 QIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLL 666 +I+ +++FE+TE++A++N +Q + + +L+ LGC+ A+DDFG G+ SY+ LK+ D+L Sbjct: 474 EIDPERIVFEITETSAISNFEQTKRMVTNLRSLGCRFALDDFGAGFNSYSYLKHFPVDIL 533 Query: 667 KIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYL 726 KIDG FI ++ ++ +D +V S+ +A VAE+VE E + G+D++QGYL Sbjct: 534 KIDGGFITDLDNDPVDQLLVKSMIDIAHSLGKKTVAEFVERESTLNLLKGYGVDFVQGYL 593 Query: 727 IGKPQPLI 734 +GKPQ +I Sbjct: 594 VGKPQSII 601 >UniRef50_Q47K14 Diguanylate cyclase/phosphodiesterase n=1 Tax=Dechloromonas aromatica RCB RepID=Q47K14_DECAR Length = 783 Score = 158 bits (399), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 133/455 (29%), Positives = 210/455 (46%), Gaps = 51/455 (11%) Query: 317 TRQRAVVRRIQRLAYVDPVVHLPNV--------RALNRALRDAPWS-ALCYLRIPGMEML 367 T +R + + +A DP+ L N R ++R RDA S A+ Y I + + Sbjct: 350 TNERQLAEHLLFMAERDPLTGLANRARFAAELDRLVSRFQRDATQSGAVLYFDIDEFKTI 409 Query: 368 VKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRL------NTESHQERITAL 421 +G + + + +S L+ GE + +L G++ A+ ++ ER+ Sbjct: 410 NDTFGHRVGDNVLVRTADVVSKLVRTGELLARLGGDEFAIVAPGADLDGVQAMAERVV-- 467 Query: 422 DSHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRR 481 L F +DG I + I LL + EL +A +R Sbjct: 468 -KALTGLSFEFDGKRFGLTISLG----------IALLPEHAASAEELVAHADAAMYQAKR 516 Query: 482 GAMYLQR----ELKDKVAMM------NRLQQALEHNHFFLMAQPI--TGMRGDVYHEILL 529 R +L + M+ +++Q AL N L Q + T R ++E L+ Sbjct: 517 SGKNCWRIYRPDLDESSHMLSQLGWNDKIQAALNENRLVLHFQGVHVTATRAISHYEALV 576 Query: 530 RMKGEN--DELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSP 587 RM + DEL+ P SF+P A G ID WVI + +A +PA AIN+S Sbjct: 577 RMIDPDNPDELLQPGSFIPAAERTGRIVDIDRWVIGTAIHKLA-GMPSLPA--LAINVSA 633 Query: 588 TSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDD 647 S +S LL ++ + +LI E+TE+ AL N++ ++ + L+ LGC + +DD Sbjct: 634 RSFDDPTLARTISDLLTEFHVNPQRLIIELTETAALANIRDSERFIDDLRRLGCTVCLDD 693 Query: 648 FGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVEN 707 FG G++S+A LK+++AD+LKIDG FIRN+VSN D V +I +AR VAE+V + Sbjct: 694 FGVGFSSFAYLKHLSADVLKIDGMFIRNLVSNREDQVFVRAIVEVARGLGKKTVAEFVGD 753 Query: 708 EEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEP 742 + LG+DY QGY + P + EI P Sbjct: 754 APTLALLGELGVDYAQGYYLSFP------IAEISP 782 >UniRef50_B8HUG4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HUG4_CYAP4 Length = 583 Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 117/436 (26%), Positives = 213/436 (48%), Gaps = 35/436 (8%) Query: 320 RAVVRRIQRLAYVDPVVHLPN--------VRALNRALRDAPWSALCYLRIPGMEMLVKNY 371 R+V R+ + DP+ L N ++ L+++L + LCYL I ++ Sbjct: 138 RSVEARLSWQSQHDPLTGLLNRTAFESVLLKTLHQSLSEPQPHVLCYLDIDQFRIINDAC 197 Query: 372 GIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLAL---RLNTESHQERITALDSHLKQF 428 G + +++ + L + +L+ + + + + E ++ + L +++ Sbjct: 198 GYRAGDELLCQVASLVQNSLAVTDTFARLNSDSFGILLAQCSLEQARQLMERLRQKIQEC 257 Query: 429 RFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVT--NAPENMQRRGAMYL 486 RF W + + ++ LL ++ N N Q + Sbjct: 258 RFIWQDKMFVTTVSIGLVEFSPATPNLASLLNAAEAACYVAKERGRNRCHNFQSDDIELV 317 Query: 487 QRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDV----YHEILLRMKGENDELISPD 542 Q+ + V ++ L +AL N F L Q I + D ++E+LLR++ +L+SP Sbjct: 318 QK--RGAVQWLSYLNKALAENRFRLFFQTIRPLGKDAAPIDHYEVLLRLEDNGGQLVSPA 375 Query: 543 SFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMP---------AHRF-AINLSPTSVCQ 592 F+ A F L +ID WVI+ + E P H F A+NLS S+ Sbjct: 376 VFIGAAERFNLMPNIDRWVIKTLFALIREQLIPQPDPAALSQEEQHCFYAVNLSGASIND 435 Query: 593 ARFPVEVSQLLAKYQ---IEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFG 649 R + LL ++Q + + FE+TE+ A++N+ +A ++ L++LGC+ A+DDFG Sbjct: 436 DRL---IEFLLEEFQTSGVPPAMICFEITETVAISNLGKAAQLIRELKKLGCRFALDDFG 492 Query: 650 TGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEE 709 +G +S+ LKN+ D LKIDG+FIRNI+++S+D +V +I ++++ ++ +AE+VEN+ Sbjct: 493 SGMSSFGYLKNLPVDYLKIDGNFIRNIINDSIDLAMVRAIQQISQVMQIETIAEFVENQS 552 Query: 710 IREAVLSLGIDYMQGY 725 I EA+ LG++Y QGY Sbjct: 553 ILEAISDLGVNYAQGY 568 >UniRef50_A6EX87 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Marinobacter algicola DG893 RepID=A6EX87_9ALTE Length = 1233 Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 97/304 (31%), Positives = 166/304 (54%), Gaps = 24/304 (7%) Query: 441 IGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAM---- 496 + S C P GEL A L++ ++ +R+G ++R ++D+ Sbjct: 930 LSASVC----PFEDTVRSAGELMNQANLAL-----KSAKRKGGNSVER-VRDQSQQAPAS 979 Query: 497 ----MNRLQQALEHNHFFLMAQ---PITG-MRGDVYHEILLRMKGENDELISPDSFLPVA 548 + + +++ +L AQ P+TG GD+Y E+LL ++ + + ISP S++ A Sbjct: 980 GPLWVPEIDRSIRDGSLYLRAQRILPLTGGSTGDMY-ELLLGLQNSSGQEISPQSYIEAA 1038 Query: 549 HEFGLSSSIDMWVIEHTLQFMAENRAKMPA-HRFAINLSPTSVCQARFPVEVSQLLAKYQ 607 +F SS +D+WVI+ + +M E+ M + H F INLS S+ F ++ + ++ Sbjct: 1039 EQFRRSSRVDLWVIDEAIGWMEEHPDAMESIHTFNINLSGASLSDDAFLFDLETRMKQHS 1098 Query: 608 IEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLK 667 Q+ FEVTE++A+ N+ A + ++ LGC+ A+DDFGTG +SYA L+ + D +K Sbjct: 1099 ALTHQICFEVTETSAVANLHYAADFMTEMKRLGCRFALDDFGTGLSSYAYLQKLPVDYVK 1158 Query: 668 IDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLI 727 +DG F+R++ SN +Y +V SI L M +AEYVE+ E E + + +D+ QG+ I Sbjct: 1159 VDGIFVRDMASNLTNYALVRSITELCHFLDMKTIAEYVEDMETLELLKEIQVDFGQGFCI 1218 Query: 728 GKPQ 731 KP+ Sbjct: 1219 AKPR 1222 >UniRef50_Q67RI1 Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum RepID=Q67RI1_SYMTH Length = 1016 Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 88/243 (36%), Positives = 134/243 (55%), Gaps = 2/243 (0%) Query: 499 RLQQALEHNHFFLMAQPITGMR-GDVY-HEILLRMKGENDELISPDSFLPVAHEFGLSSS 556 RL+ AL + F L+ QPI ++ G+V +E LLRM + I P FLP A GL Sbjct: 772 RLRAALAEDRFTLVFQPILDLQLGEVTQYEALLRMVEPDGRQIPPGEFLPAAASCGLMPE 831 Query: 557 IDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFE 616 ID WV+ ++ +A +A+ ++NLS ++ V L+ ++QI L FE Sbjct: 832 IDRWVVRRAVETIAREQARGRRLTLSVNLSGQALNDPSLVPLVRDLIDRHQIPPGSLRFE 891 Query: 617 VTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNI 676 VTES A+T++ QA ++ L +LGC+ A+DDFG G++S LK + LKIDG FI + Sbjct: 892 VTESAAVTDLDQAAACIEALTDLGCEFALDDFGVGFSSLRYLKRLPVRTLKIDGGFIERL 951 Query: 677 VSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDT 736 + +D +V S+ +AR + VAEYV ++ E + G+D QGY +G P PL + Sbjct: 952 PDDPVDQSLVRSMVTMARGLGVRTVAEYVTSDRALEMLRRCGVDAAQGYYVGPPGPLPEE 1011 Query: 737 LNE 739 + Sbjct: 1012 AGQ 1014 >UniRef50_C5AKX9 Diguanylate cyclase/phosphodiesterase n=1 Tax=Burkholderia glumae BGR1 RepID=C5AKX9_BURGB Length = 995 Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 88/257 (34%), Positives = 144/257 (56%), Gaps = 5/257 (1%) Query: 480 RRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMR--GDVYH-EILLRMKGEND 536 R + +R ++D +A++ L + L QPI + G+ E+LLR++ E+ Sbjct: 704 RSDSRDFERRMRD-LALIGTLSEEAVPEGLVLAMQPIVSVTHAGEALDFEVLLRLRREDG 762 Query: 537 ELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRF-AINLSPTSVCQARF 595 L+S F+ G +ID+WV+ L ++ N+A + RF +NLS S+ R Sbjct: 763 TLLSAADFIDAVERLGTIGAIDLWVLSSVLAWIERNQATLAKTRFICVNLSGASLNDERI 822 Query: 596 PVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASY 655 E+ + L + A L E+TE+ AL ++K +Q + ++G +IA+DDFG G+ S+ Sbjct: 823 VAEMFRRLEAHASIAHLLCLEITETVALHDLKTSQHFVARAHDMGVRIALDDFGAGHTSF 882 Query: 656 ARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVL 715 LK ++AD LKIDG F+R++ + D IV SI LAR M +AE+VE+ EA+ Sbjct: 883 KYLKALSADALKIDGEFVRSMCEHPADIAIVESIVDLARNLGMRTIAEWVEDTRTFEALR 942 Query: 716 SLGIDYMQGYLIGKPQP 732 ++G+DY+QGY +G+P P Sbjct: 943 AIGVDYVQGYAVGRPVP 959 >UniRef50_Q3SIB5 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SIB5_THIDA Length = 698 Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 120/417 (28%), Positives = 204/417 (48%), Gaps = 33/417 (7%) Query: 342 RALNRALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLS 401 RA AL ALCY+ + +++ + G + ++L+ L L + + +L Sbjct: 290 RARMSALEQGREHALCYMDLDQFKVINDSCGHAAGDELLRQLALLLKGKLRERDTLARLG 349 Query: 402 GNDLALRLNTESHQERITALD---SHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLL 458 G++ AL L S + + D S +++FRF W + V + + L Sbjct: 350 GDEFALLLENCSIDDALEVADAFRSEVQRFRFKWGDRIFAVGMSVGMVAIDADSGTAAGL 409 Query: 459 LGELNTVAELSIVTNAPENMQRRGAMYLQREL-----KDKVAMMNRLQQALEHNHFFLM- 512 + + + A + + + +Y R+ + ++ + R+Q+ALE N L Sbjct: 410 MSAADAACYV-----AKDRGRNQIHLYESRDSDLVRHRGEMQWVTRIQRALEENRLSLSW 464 Query: 513 -------AQPITGMRGDVYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHT 565 A P G R + E+LLRM ++ I P +F+P A + + ++D WV+E T Sbjct: 465 QEIRRTDAAPEPGTR---HVELLLRMIDDDGGEILPMAFIPAAERYSIMPALDAWVVEET 521 Query: 566 LQFMAEN-RAKMPAHR-FAINLSPTSVCQARFPVEVSQLLAKYQIE---AWQLIFEVTES 620 L+ ++ H FA+NLS S+ + P LLA+ Q L FE+TE+ Sbjct: 522 LRLCKRYLKSTCEVHCLFAVNLSGASL---KDPTFRKTLLAQLQQNPELGPHLCFEITET 578 Query: 621 NALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNS 680 A+ N+ + ++ GC A+DDFG+G +S+ LKN+ D LKIDG+F+R+I +N+ Sbjct: 579 AAIGNLGVVNGFIDAMRGFGCSFALDDFGSGLSSFTYLKNLRVDYLKIDGAFVRDIATNA 638 Query: 681 LDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTL 737 +D +V +I + + VAEYVE+EEI + +G+DY QG + +P+P IDTL Sbjct: 639 IDRSMVEAIHRIGHQMGLQTVAEYVESEEILSLLREIGVDYAQGSAVRRPEP-IDTL 694 >UniRef50_Q1PVH4 Conserved hypothetical response regulator protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PVH4_9BACT Length = 685 Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 122/426 (28%), Positives = 206/426 (48%), Gaps = 19/426 (4%) Query: 329 LAYVDPVVHLPNVRALNR--------ALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYK 380 LA DP+ L N R A R+ AL +L + + + G + Sbjct: 261 LADHDPLTCLFNRRRFKEELELRLLEAQRNHIKGALLFLDLDNFKYVNDTLGHQHGDELL 320 Query: 381 QKLSHWLSPLLEPGEDVYQLSGNDLALRL-NTESHQ-ERITALDSHLKQFRFFWDGM-PM 437 KLS L L + + +L G++ A+ L NTE Q + I+ L + D + P+ Sbjct: 321 IKLSCILKERLRQTDILARLGGDEFAVILPNTEEEQAQHISKQLVELTRNCLALDSLNPL 380 Query: 438 QPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQREL--KDKVA 495 + + + + LL A++++ E R L+ ++ + + Sbjct: 381 HITVSIGIAMFPAHGDTAETLLAN----ADMAMYQAKDEGRDRGCIFSLEHKIHIETQYD 436 Query: 496 MMNRLQQALEHNHFFLMAQPITGM--RGDVYHEILLRMKGENDELISPDSFLPVAHEFGL 553 R++ ALE N F L QPI + R +E+LLR+ +N E++ P FL A FG+ Sbjct: 437 WKRRIKIALEQNSFALYLQPIINVKTRKITAYEVLLRLTEKNQEVVPPLKFLGTAERFGI 496 Query: 554 SSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQL 613 ID WV+ + ++ + E + INLS + + + + + + L Sbjct: 497 IHEIDRWVVVNAIRIIKELKLHENGIFLEINLSGKAFSDNELLSIIKREIGENILRPEML 556 Query: 614 IFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFI 673 IFE+TE+ + N+ +AQ + L+ +GC+ A+DDFG+G++S+ LK++ D LKIDGSFI Sbjct: 557 IFEITETAIIENIAKAQHFIATLKSIGCRFALDDFGSGFSSFNYLKHLPVDYLKIDGSFI 616 Query: 674 RNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPL 733 +++ NS+D +V + AR K L +AE+VE +E + + +GIDY QG+ GKP + Sbjct: 617 QHLSQNSVDQHLVKGMVEAARGLKKLTIAEFVETKETFQLLKEIGIDYAQGHYFGKPLSV 676 Query: 734 IDTLNE 739 D L + Sbjct: 677 CDALQQ 682 >UniRef50_C0QD16 Putative uncharacterized protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QD16_DESAH Length = 938 Score = 155 bits (392), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 95/256 (37%), Positives = 144/256 (56%), Gaps = 5/256 (1%) Query: 487 QRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSF 544 Q L ++ N L++A+E++ F L QPI ++ D ++E L+R+ E +I P F Sbjct: 682 QVHLTQRMYWKNVLEEAIENDRFVLYFQPILDLKTDRISHYECLIRLISEQGSVIPPGEF 741 Query: 545 LPVAHEFGLSSSIDMWVIEHTL-QFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLL 603 + A GL ID V+ + Q + N+ M +INLS S+ E+ +LL Sbjct: 742 IEYAEVLGLIGHIDRIVMAKAIAQHLEFNKRGMTV-GLSINLSGRSLNDRTVSHEIRRLL 800 Query: 604 AKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNA 663 + ++IFE+TE+ A++N A+ + ++ELGC+ AIDDFG G++S+ LK++ Sbjct: 801 TLPHVNPEKIIFEITETAAISNFPSARTLINEVKELGCRFAIDDFGVGFSSFQYLKDLAV 860 Query: 664 DLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQ 723 D +KIDGSFIR I ++ D V S+ +A +AE+VENE I + IDY Q Sbjct: 861 DYVKIDGSFIRKIDTSHGDRIFVKSMSEIAHALGKKTIAEFVENEAIVSVLREYEIDYAQ 920 Query: 724 GYLIGKPQPLIDTLNE 739 GY IGKPQP I+ LNE Sbjct: 921 GYHIGKPQP-IEHLNE 935 >UniRef50_B9L207 Developmental regulator MorA n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L207_THERP Length = 897 Score = 155 bits (392), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 85/243 (34%), Positives = 139/243 (57%), Gaps = 8/243 (3%) Query: 493 KVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHE 550 + A ++ +Q AL + + L AQPI +R + +E+L+R++ E + ++ P F PV Sbjct: 658 RTAHLSIVQSALANGNLLLFAQPILDLRRERIAAYELLIRLR-EGERVLEPGMFFPVTEG 716 Query: 551 FGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEA 610 G+ D+WV+E + +R R +N+S ++ +AR + LL + Sbjct: 717 LGIVPQFDLWVLERACELNLTSRG-----RIHLNVSARTLREARHFAVLRDLLERCPFAP 771 Query: 611 WQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDG 670 QL+ EVTE+ AL + QA LQ L+E GC+IA+DDFG GY+S +L+++ D +KIDG Sbjct: 772 RQLVLEVTETTALIDFVQAHEHLQRLRERGCRIALDDFGVGYSSLYQLRHLPIDFIKIDG 831 Query: 671 SFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKP 730 FI ++ N ++ IV +I LAR +A +VE+ E + LG+D+ QG+ IG+P Sbjct: 832 MFIVDLAENPVNQSIVRAIVALARAVGAETIAGWVESAETLALLRELGVDHAQGFAIGRP 891 Query: 731 QPL 733 +PL Sbjct: 892 EPL 894 >UniRef50_C8R1Y2 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R1Y2_9DELT Length = 603 Score = 155 bits (391), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 89/246 (36%), Positives = 148/246 (60%), Gaps = 13/246 (5%) Query: 500 LQQALEHNHFFLMAQPITGMRGDV--YHEILLRMKGENDELISPDSFLPVAHEFGLSSSI 557 L+QAL + F L QPI R ++E L+R+ EN ++ SP F+P A GL + Sbjct: 350 LRQALRNGSFALEFQPIVRARDGACCHYEALIRLL-ENGKMYSPGEFIPSAERMGLIHQL 408 Query: 558 DMWVIEHTLQFMAE---NRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAW--- 611 D+WV+E + +A + P R +INLS ++ R PV + L K ++ Sbjct: 409 DLWVVEAAVDRLAAMPLTEGQEPI-RLSINLSAYAL---RNPVLMPLLERKLEMTGLSPR 464 Query: 612 QLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGS 671 +L+FE+TE+ A+T +KQA+ ++ ++ LGC+ A+DDFG+G++++ LK+ D+LKIDGS Sbjct: 465 RLMFEITETTAVTQLKQARELVERMRSLGCRFALDDFGSGFSTFNYLKHFPVDMLKIDGS 524 Query: 672 FIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQ 731 F+ N++ N D +V S+ LA V+AE+VE+E + +G+DY+QG+ +G+PQ Sbjct: 525 FVVNMLKNPTDELLVRSMVELAHSLDKQVIAEFVEDEATARRLREIGVDYLQGFYLGRPQ 584 Query: 732 PLIDTL 737 +++L Sbjct: 585 SRMESL 590 >UniRef50_C6P6Y2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6Y2_9PROT Length = 814 Score = 155 bits (391), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 128/450 (28%), Positives = 209/450 (46%), Gaps = 23/450 (5%) Query: 317 TRQRAVVRRIQRLAYVDPVVHLPNVR--------ALNRALRDAPWSALCYLRIPGMEMLV 368 T +A +I LA+ DP+ LPN R AL + R AL ++ + + L Sbjct: 368 TEHKAAEEKINNLAFYDPLTGLPNRRLLLDRLQHALASSARSGREGALLFIDLDNFKALN 427 Query: 369 KNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRL-NTESHQERITALDSHLKQ 427 G + ++++ L+ + G+ + +L G++ + L + H A + + Sbjct: 428 DTLGHDMGDLLLRQVAQRLASCVREGDSIARLGGDEFVVMLEDLGGHDLEAAAQTEAVGE 487 Query: 428 FRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLG------ELNTVAELSI--VTNAPENMQ 479 G+P Q V++ Y +P L G EL A++++ A N Sbjct: 488 KILAMLGLPYQL---VAHEYRCTPSIGATLFSGHELAKEELLKRADIAMYQAKQAGRNTV 544 Query: 480 RRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD-VYHEILLRMKGENDEL 538 R +Q + +VA+ L +AL+ F L Q G + E L+R L Sbjct: 545 RFFDQQMQDAVTARVALEGELHKALDRQQFRLHYQIQVDASGRPLGAEALIRWMHPERGL 604 Query: 539 ISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRF--AINLSPTSVCQARFP 596 + PD F+ +A E L I WV++ + + P A+N+S T Q F Sbjct: 605 VPPDQFIGMAEETDLILPIGQWVMDTACAQLKTWQQHAPTRDLVLAVNVSATQFHQLDFV 664 Query: 597 VEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYA 656 +V + ++ I+ L E+TES L N++ T+ L+E+G Q ++DDFGTGY+S Sbjct: 665 FQVRATVQRHAIDPKLLKLELTESMLLENIEDTIRTMNALKEIGVQFSLDDFGTGYSSLQ 724 Query: 657 RLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLS 716 LK + D +KID SF+R+I S+S D +IV +I +A+ + V+AE VE EE R+ + Sbjct: 725 YLKRLPLDQIKIDQSFVRDIASDSNDREIVGTIIAMAQNLYLDVIAEGVETEEQRQFLQD 784 Query: 717 LGIDYMQGYLIGKPQPLIDTLNEIEPIRES 746 G + QGYL GKP P+ ++P R S Sbjct: 785 NGCTHFQGYLFGKPVPVEQFEAMLQPDRAS 814 >UniRef50_A1S2J3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Shewanella amazonensis SB2B RepID=A1S2J3_SHEAM Length = 837 Score = 155 bits (391), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 124/447 (27%), Positives = 213/447 (47%), Gaps = 34/447 (7%) Query: 313 AVLATRQRAVVRRIQ----RLAYVDPVVHLPNVRA----LNRALRDAPWSALCYLRIPGM 364 A+LA R R++ R A D V LPN + R ALCYL + Sbjct: 391 ALLALRDVTAEERLKSELRRQAEEDAVTGLPNRTTFEARMKRLASGQETVALCYLDLEQF 450 Query: 365 EMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLA-LRLNTESHQERITALDS 423 +++ + G + + ++ L PGE + ++ G++ L L +H+ + Sbjct: 451 KIINDSCGHLEGDRMLCMVAKTFQSCLAPGELLGRVGGDEFGILLLGRSAHEVALLLKTL 510 Query: 424 HLKQFRFFWDGMPMQPQIGVS--YCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRR 481 K + ++GVS + R+P+ + GEL A+++ V +++ Sbjct: 511 QQKLSMQVLESQGQCHRVGVSIGVAFARAPLPPV----GELFKDADIACVA-----AKQK 561 Query: 482 GAMYLQRELKDKVAMMN----------RLQQALEHNHFFLMAQPITGMRGDVYH---EIL 528 G+ + DK +N R+ +A+ + L QPI + G EIL Sbjct: 562 GSNQIHF-YDDKDKELNYQRNAPKWALRIAKAIHNRELELYFQPIHSLHGGSPRKRMEIL 620 Query: 529 LRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPT 588 LR++ N ++ P F+ A F L +D V+ ++++A + H +INLS Sbjct: 621 LRIRESNGRILPPAQFIASAERFKLMPEVDKAVVSMAMEWLAAHPNFWHDHCLSINLSGN 680 Query: 589 SVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDF 648 S+ + + L + I + FE+TE+ A+ N ++A L+ L++ G AIDDF Sbjct: 681 SLGVEGMESFIVEQLQRNGIPPACICFEITETTAIQNRQRALDMLRSLRKQGFAFAIDDF 740 Query: 649 GTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENE 708 G+G+ASY L+ + D +KIDG F+R + SN+ DY IV SI + + + VAE+VE++ Sbjct: 741 GSGFASYGYLRELPVDYVKIDGCFVRQLASNAKDYAIVKSIHDVCSVMGIETVAEFVESQ 800 Query: 709 EIREAVLSLGIDYMQGYLIGKPQPLID 735 +I + +GI+Y QGY +G+P+PL D Sbjct: 801 DIMARLEEIGINYAQGYAVGRPKPLKD 827 >UniRef50_P74400 Sll0267 protein n=3 Tax=Bacteria RepID=P74400_SYNY3 Length = 1578 Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 123/440 (27%), Positives = 212/440 (48%), Gaps = 31/440 (7%) Query: 317 TRQRAVVRRIQRLAYVDPVVHLPNVR--------ALNRALRDAPWSALCYLRIPGMEMLV 368 T ++ +I+ LAY DP+ LPN R AL A R + A+ + + G + L Sbjct: 1137 TERKQAEAQIENLAYYDPLTALPNRRLLLDRAENALALAQRSKHFGAIVLIDLDGFKTLN 1196 Query: 369 KNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITA-----LDS 423 G + Q ++ L+ L + V +L G++ + L +H + A + Sbjct: 1197 DARGHDSGDRLLQMVAKRLADSLRDSDTVARLGGDEFIVLLPELAHDRELAARLGLGVGE 1256 Query: 424 HLKQ-----FRFFWDGMPMQPQIGVS-YCYVRSPVNHIYLLLGELNTVAELSIVTNAPEN 477 ++Q F + + + IG++ + + V+ ++ E +T + A + Sbjct: 1257 KIRQALATPFTLEAEQVQISGSIGITLFPKLNEKVSDLF---KEADTA-----MYQAKKA 1308 Query: 478 MQRRGAMY---LQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD-VYHEILLRMKG 533 + + ++ +Q E++ + A+ L+ ALE F + QP G + E LLR Sbjct: 1309 GRDKVCLFESQMQLEVESRFALEADLRSALEQKQFQVYLQPQVDSHGVWIGAEALLRWNH 1368 Query: 534 ENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQA 593 I P+ F+P+A E GL I +V+E Q++A + R AIN+SP QA Sbjct: 1369 PGRGFIPPNIFIPIAEEIGLIGGIGDFVLEQVCQYLARLQQLGLTLRIAINVSPRQFRQA 1428 Query: 594 RFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYA 653 F E+ LLA ++ ++L EVTE + + QA T+ LQ LG ++DDFGTGY+ Sbjct: 1429 NFAKEIKNLLACTGVDPYRLTLEVTEGLIVEDTHQAIATMFELQTLGIHFSVDDFGTGYS 1488 Query: 654 SYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREA 713 S + LK + + LKID +F+++ + + +V +I +AR + +VAE VE EE + Sbjct: 1489 SLSYLKRLPLNELKIDRAFVQDAPQDLNNAALVEAIISVARTFNLAIVAEGVETEEQVQF 1548 Query: 714 VLSLGIDYMQGYLIGKPQPL 733 + LG ++ QGY G+P P+ Sbjct: 1549 LAQLGCNFYQGYFYGRPMPI 1568 >UniRef50_C9P6X4 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Vibrio metschnikovii CIP 69.14 RepID=C9P6X4_VIBME Length = 919 Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 130/454 (28%), Positives = 208/454 (45%), Gaps = 37/454 (8%) Query: 308 IVNYMAVLA--TRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL--------RDAPWSALC 357 I+NY+ L T+++A +I++LA+ D + LPN + L L R+ + A+ Sbjct: 457 IINYVITLIDITQRKAAESKIKQLAFYDQLTGLPNRQLLMERLESARLNSQRNGQYGAIL 516 Query: 358 YLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQER 417 YL + + L G ++ +S L + + V ++ G++ + L Sbjct: 517 YLDLDDFKTLNDTRGHDTGDKFLTLVSQRLLDCVRRTDTVARIGGDEFVIILE------- 569 Query: 418 ITALDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNH-------IYLLLGELNTVAEL-- 468 LDS L D + + +S Y + H + L LGE + EL Sbjct: 570 --QLDSDLDIASKRADLLCRKILDTLSKPYYIDNIEHFSTLSIGVTLFLGETKGIDELLK 627 Query: 469 ------SIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD 522 A N R +Q ++ + AM N ++ AL N F L QP G Sbjct: 628 HADLAMYQAKGAGRNTHRFFNPEMQAKVLEHAAMANDIRHALTRNEFTLYYQPQVTHDGQ 687 Query: 523 VYH-EILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMA--ENRAKMPAH 579 + E L+R + ISP F+P+A E GL + WV++ Q +A +N + Sbjct: 688 LTGAEALIRWQHPKQGTISPIEFIPIAEETGLILPLGEWVLDQACQVLAVWQNSPLTDSL 747 Query: 580 RFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQEL 639 AIN+S Q F +V + L +Y+ +L E+TES +++ + L++ Sbjct: 748 VLAINISAKQFHQTGFVQQVLEALQRYRANPDRLKLELTESMLHEDLEDTITKMSQLKKY 807 Query: 640 GCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKML 699 G ++DDFGTGY+S LK + D LKID SF+R++++NS D I +I LA+ + Sbjct: 808 GVSFSLDDFGTGYSSLNYLKRLPLDQLKIDKSFVRDLLTNSHDADIARTIVSLAKSMNLA 867 Query: 700 VVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPL 733 V+AE VE +E R A+ S G QGYL +P PL Sbjct: 868 VIAEGVETQEQRLALASYGCLDFQGYLFSRPVPL 901 >UniRef50_Q1YXX2 Putative signal transduction protein n=2 Tax=Photobacterium profundum RepID=Q1YXX2_PHOPR Length = 725 Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 123/463 (26%), Positives = 217/463 (46%), Gaps = 22/463 (4%) Query: 290 GYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALR 349 GY T +TI F++ L + +++ A+ D + L N R LN L Sbjct: 259 GYLTSITIALFGSWAMWFVLRQPEKLQKIVKQKTHELEKFAFYDYLTGLANRRLLNEHLE 318 Query: 350 D--------APWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLS 401 +AL + + + + G + Q++SH L+ ++ + V +L Sbjct: 319 QVIQQTECCGNSAALLCFDLDDFKRINDSQGHDIGDCVLQQISHRLNSVVNKNDIVARLG 378 Query: 402 GNDLALRLN---TESHQERITALDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLL 458 G++ + L+ + S RI + F + + V + S N + L Sbjct: 379 GDEFTVLLSASYSASDAGRIAGQLIEVISEPIFLNNKELSVSASVGITMIPSDGNDVSTL 438 Query: 459 LGELNTVAELSIVTNAPENMQRRGAMY---LQRELKDKVAMMNRLQQALEHNHFFLMAQP 515 L A++++ + A ++ +R + LQ++ DKV++ L A+ F L QP Sbjct: 439 LRN----ADMAMYS-AKKSGKRNYHFFNKALQKKALDKVSIEESLDTAISKKQFVLHYQP 493 Query: 516 ITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENR 573 + + +E L+R + L+ P+ F+ +A E G +I WVI+ + ++ Sbjct: 494 VFNFYSNKLCCYEALIRWNHPREGLLYPERFIGIAEESGKIKNIGYWVIQEVCNVIKMHQ 553 Query: 574 AKMPA-HRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQIT 632 + HR A+NLSP + +++ I+A L E+TES + NV+ A T Sbjct: 554 LHIGKRHRIAVNLSPRQFNDPDLLENIRRIIRNVGIDARFLEIEITESTLMENVESAIYT 613 Query: 633 LQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHL 692 L+ +ELG +AIDDFGTGY+S A LK + D LKID SF++++ SN+ D +IV ++ + Sbjct: 614 LRQFKELGITVAIDDFGTGYSSLAMLKRLPVDKLKIDRSFVKDLDSNNSDQKIVQALISM 673 Query: 693 ARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLID 735 A ++ V+AE +E +E + G D+ QGYL +P P+ + Sbjct: 674 AHTLQISVIAEGIETQEQFNLLQQYGCDFGQGYLFSRPVPITE 716 >UniRef50_Q1R0D8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1R0D8_CHRSD Length = 611 Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 135/476 (28%), Positives = 228/476 (47%), Gaps = 48/476 (10%) Query: 288 YPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALN-- 345 +P + +T + V ++ + + +R +A + +QR+ + DP+ LPN R L+ Sbjct: 142 FPEWLRVHAVTDAKGRVTHYVGLFTDI--SRHKAREQDLQRIGFEDPLTGLPNRRRLHDL 199 Query: 346 -----RALRDAPWSALCYLRIPGMEMLVKNYGI----MLRIQYKQKLSHWLSPLLEPGED 396 + LR + + I G + + G+ L ++ Q+L+ +++ G Sbjct: 200 LASRLQRLRAGEELDIALIDIDGFKAVNDAMGVDKGDRLLSRFGQRLAAFVA-----GGV 254 Query: 397 VYQLSGND-LALRLNT-ESHQERITALDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNH 454 V +L G++ +A+R T + H++ + L HL + F P++ + + C Sbjct: 255 VGRLGGDEFMAIRTTTFDDHEQWVEELRGHLSE-PFEIGETPLRLGLTIGSCRSPDDGRD 313 Query: 455 IYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHN------- 507 +L L + L N RR L+ E ++ ++N L+QAL H Sbjct: 314 AGVLFQRLESA--LYAAKRHGRNHSRRFRPSLEVEGDPQLELLNELRQALAHGTQLELFY 371 Query: 508 --HFFLMAQPITGMRGDVYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHT 565 +L + GM E LLR +ISP SF+P+A GL S++ WVIE Sbjct: 372 QTQHYLDDGRLAGM------EALLRWYHPTQGMISPASFIPLAERHGLMSALGDWVIERA 425 Query: 566 LQFMAENRAK----MPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESN 621 +A R + +P IN+S + Q ++S LAKY + A L E+TES Sbjct: 426 CAQVAAWRQQGVSFVPVW---INISAVQLIQGDLEAKLSASLAKYHVPAAMLGLELTES- 481 Query: 622 ALTNVKQAQIT--LQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSN 679 L + + I+ L L++ G IAIDDFGTGY+S A LK + D LK+D +F+R + + Sbjct: 482 VLLDERAGDISARLVALRDKGHPIAIDDFGTGYSSMAYLKQLPVDKLKLDRAFVRALPED 541 Query: 680 SLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLID 735 S D I +++ +AR ++ VVAE VE EE R+ +L+ G +QG+L +P+ + D Sbjct: 542 SADAAITSAVLAMARGLELDVVAEGVETEEQRDFLLAQGCAMVQGFLYARPERVAD 597 >UniRef50_A4CBR3 Predicted signal transduction protein containing sensor and EAL domains n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4CBR3_9GAMM Length = 834 Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 125/457 (27%), Positives = 210/457 (45%), Gaps = 31/457 (6%) Query: 316 ATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRDAPWSA----LCYLRIPGMEMLVKNY 371 A R R ++ Q L+ DPV LPN LN+AL + L + + N+ Sbjct: 384 AERYRVKEQKHQYLSTHDPVCGLPNHIVLNKALAQLHLAGRAHTLLFFKPYTYTTTRANF 443 Query: 372 GIMLRIQYKQKLSHWLSPLLE-----------PGEDVYQLSGND--LALRLNTESHQERI 418 GI+ +Y +L L+ L+ G V+ ND AL ++T+ + I Sbjct: 444 GIVHANEYLIELCFQLNDKLDGLNMFIFEERNQGSSVFICRFNDETFALLIDTKIEELLI 503 Query: 419 TALDSHLKQF---RFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAP 475 S++K+ + DG + Q+ + PV+ + L + L Sbjct: 504 EQYVSNIKEALEQGIYLDGTYLVGQVDIGIA--SYPVHALSADLLIQRALQSLQFAAGEV 561 Query: 476 ENMQRRGAMYLQRE---LKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDVYH--EILLR 530 ++ +Y Q +++++ + L QA+ +N F L QP +R + + E LLR Sbjct: 562 DHW----CLYQQDTDALMRNRLKLAADLHQAIANNEFSLYHQPQIDLRNNSIYGSEALLR 617 Query: 531 MKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSV 590 K I PD F+PVA GL + I WV+E L + +P+H+ +IN+S + Sbjct: 618 WKHPELGFIPPDEFIPVAESAGLINEITEWVVEQALLHHKHILSSLPSHKISINISARDL 677 Query: 591 CQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGT 650 + PV++ LL + I+ ++ E+TES + + +A+ L +E+G ++AIDD+GT Sbjct: 678 NKRELPVQLLTLLTELNIKPSSIVIELTESATVKDKTEAKNVLDDFKEMGIKVAIDDYGT 737 Query: 651 GYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEI 710 GY+S A L + +KID F+ N+ SN I + +A+ VVAE VE+E + Sbjct: 738 GYSSLAYLSQLGFHEIKIDKQFVFNLESNRRHQTICKTTIEMAKNLDAYVVAEGVESELV 797 Query: 711 REAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIRESA 747 + + G + QGY KP P + +E +SA Sbjct: 798 AKMLRQYGCEIAQGYYFSKPMPFSEYCQWLERYAQSA 834 >UniRef50_C9R8T9 Diguanylate cyclase/phosphodiesterase with GAF sensor n=1 Tax=Ammonifex degensii KC4 RepID=C9R8T9_AMMDK Length = 673 Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 124/443 (27%), Positives = 214/443 (48%), Gaps = 31/443 (6%) Query: 312 MAVLATRQRA--VVRRIQRLAYVDPVVHLPNVRALNRALRDAPW-------SALCYLRIP 362 + VLA R++ V ++ L + DP+ LP+ L L+ A SAL + I Sbjct: 221 LEVLAHREQCLQVQEKLHHLVHHDPLTGLPHRFYLEDHLKQAVLKARRGISSALLVIDID 280 Query: 363 GMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALD 422 +++ N+G + Q + +L + ED+ D + L + +E L Sbjct: 281 NFQLVNDNWGYKAGDRLLQAFARFLQENIRE-EDIIARVAGDKFMVLMEDVFEEEACKLA 339 Query: 423 SHLK----QFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENM 478 L+ + F DG + + V+ ++ + A+L++ E Sbjct: 340 EELRRRVEEGSFELDGQRCRITVSAGISMVKGDEAAETVM-----SQADLALRRAKEEGR 394 Query: 479 QR----RGAMYLQRELKDKVAMMNRLQQALEHNH-FFLMAQPITGMRG--DVYHEILLRM 531 R R L LK + ++N L++AL L QP+ + V++E LLR+ Sbjct: 395 NRVVLFRPEEELLARLKGEQEVLNLLKEALATGRGLLLFLQPVVRLSDLQVVHYEALLRL 454 Query: 532 KGEN-DELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSV 590 + N D SP F+P+A FGL +D WVIE L + + P + +NLS SV Sbjct: 455 RECNMDRYCSPAQFIPLAERFGLMPRLDRWVIEAALDILRAH----PKLKLFVNLSGLSV 510 Query: 591 CQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGT 650 + L + +++ +L FEVTE+ A+ N+ +A+ L L++LGC++A+DDFG+ Sbjct: 511 GDDSLLEYLQAKLKEKEVDPSRLGFEVTETAAIRNLLRAERWLGRLKQLGCELALDDFGS 570 Query: 651 GYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEI 710 G+++++ L+++ + LKID SFIR + S+ + +V ++ +A L VAE +ENEE Sbjct: 571 GFSTFSYLRSLPVNYLKIDLSFIRGLTSDRMHRALVEAMNTVAHTLGKLTVAEGIENEET 630 Query: 711 REAVLSLGIDYMQGYLIGKPQPL 733 + LG D+ QGY G+P+P+ Sbjct: 631 LRILQELGTDFGQGYYFGRPEPV 653 >UniRef50_C6MI98 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MI98_9PROT Length = 798 Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 118/436 (27%), Positives = 211/436 (48%), Gaps = 24/436 (5%) Query: 317 TRQRAVVRRIQRLAYVDPVVHLPNVRAL-NR------ALRDAPWSALCYLRIPGMEMLVK 369 T QR + ++ A D + L N + NR ++R AL YL + +++ Sbjct: 355 TEQRKLTLKLAYQAAHDSLTGLLNRKEFENRLSKILTSMRKNDMHALLYLDLDQFKIIND 414 Query: 370 NYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSH---LK 426 + G + ++++ L L + + +L G++ + L + + D+ ++ Sbjct: 415 SCGHSAGDKLLRQVTALLHSKLRARDTLARLGGDEFGVILEHCPKDQALQVADTLRELVQ 474 Query: 427 QFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYL 486 FRF W G IGVS P+ H L A+ S A E + R +Y Sbjct: 475 NFRFQWRGKTFT--IGVSIGLF--PITHGNQGLEHALNAAD-SACYAAKEQGRNRVQIYQ 529 Query: 487 Q-RELKDKVAMMN---RLQQALEHNHFFLMAQPI-----TGMRGDVYHEILLRMKGENDE 537 L+ V M R+Q AL F L QPI + + EILLR++ EN + Sbjct: 530 SVPHLQGSVEMQQWLPRIQNALTEQRFQLYYQPIQLISPKHAEQEQHGEILLRLQDENGQ 589 Query: 538 LISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPV 597 LI P +FLP A ID WV++ +LQ + + + IN+S ++ F Sbjct: 590 LIMPGAFLPAAGRHDQILPIDRWVVQQSLQLIKAHATHTINAIYTINISGQALVNEDFLD 649 Query: 598 EVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYAR 657 + Q++ + FE++E AL +++ + L+ELGC+I+IDDF + +S++ Sbjct: 650 FTVNSIKASQLDPACICFEISEQTALNDLQHVIRFVTTLKELGCRISIDDFSSNLSSFSY 709 Query: 658 LKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSL 717 LK++ D LKIDG I+N++++ ++ +V SI H+ + ++ +A +VEN++ + + ++ Sbjct: 710 LKDIPLDYLKIDGRLIKNMLTDPVNQAMVESIHHIGHIMRLKTIAVWVENDQTLQILENI 769 Query: 718 GIDYMQGYLIGKPQPL 733 G+DY+QG+ + +P PL Sbjct: 770 GVDYVQGFWVAEPTPL 785 >UniRef50_Q0AG61 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Nitrosomonadaceae RepID=Q0AG61_NITEC Length = 984 Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 87/235 (37%), Positives = 135/235 (57%), Gaps = 3/235 (1%) Query: 499 RLQQALEHNHFFLMAQPITGMRGDVYH--EILLRMKGENDELISPDSFLPVAHEFGLSSS 556 +++ A H+ + L QPI +R + H E+LLRM+ E+ + P +F+ A GL Sbjct: 738 KIEYANAHDRYLLYLQPIQTLRDGMTHHYEVLLRMQDEDGTIHPPGAFIRAAEHTGLIHK 797 Query: 557 IDMWVIEHTLQFMAE-NRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIF 615 ID V+ + A NRA+ F+INLS + +SQ L+ QI+ L+F Sbjct: 798 IDHLVLHKAIALAARINRAENRRIGFSINLSAHAFNDPELLPTISQALSVNQIDPGLLMF 857 Query: 616 EVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRN 675 E+TE+ AL N+ + L L++LGC +DDFG G++S+ L+ + D +KIDGSFIRN Sbjct: 858 EITETAALDNLPGTRGLLYDLKQLGCGFVLDDFGVGFSSFYYLRELPVDAVKIDGSFIRN 917 Query: 676 IVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKP 730 + SN D +V+++C +A+ + AE+VEN+EI + L +D+ QGY IG P Sbjct: 918 LASNPDDQILVSALCSVAKGFGKKITAEFVENKEILSILDKLEVDFAQGYYIGMP 972 >UniRef50_C0QQ30 Signal transduction response regulator n=1 Tax=Persephonella marina EX-H1 RepID=C0QQ30_PERMH Length = 847 Score = 152 bits (385), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 119/401 (29%), Positives = 200/401 (49%), Gaps = 27/401 (6%) Query: 346 RALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDL 405 RA R L + I + + YG QK++ + + G+ V + G++ Sbjct: 455 RADRHGYKFTLLTIDIDNFKAINDTYGYGFGDIILQKIAQIIRDTIRRGDIVARYGGDEF 514 Query: 406 ALRLN-TESHQERITALDSHLKQFRFFW---DG--MPMQPQIGVSYCYVRSPVNHIYLLL 459 A+ L T++ + A D RFF DG + + IG++ Y + L L Sbjct: 515 AVILPLTDAEKGYSIAKDIIDSINRFFLIATDGSKVKVSASIGMA-VYPDHGKDAKDLFL 573 Query: 460 GELNTVAELSIVTNAPENMQRRGAMYLQRE-----LKDKVAMMN-RLQQALEHNHFFLMA 513 N + ++ M+ +G++YL E + K+ +N + A+E+ Sbjct: 574 FADNILHKVK--------MENKGSVYLPTEDDVEQIYKKIGKLNITILNAIENKKVIPYF 625 Query: 514 QPITGMRGD-VY-HEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAE 571 QPI ++ D VY HE+L R++ E L D F+ VA + G+ +D+ ++E+T + + E Sbjct: 626 QPILDIKEDQVYIHEVLCRIENEVKTL-KADEFIRVAEKMGVIHKLDLVLMENTFKKVKE 684 Query: 572 NRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQI 631 + +NLSP ++ F + L++ Y + ++FE+TE ++N+ + Sbjct: 685 ENYEGV---LFMNLSPKAIMSKEFLESIKSLVSDYHLNPSNIVFEITERETVSNISILED 741 Query: 632 TLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICH 691 + L++ G + AIDDFG+G++S+ +K D++KI+G FIR++V N D V SI Sbjct: 742 FVMKLKDEGFKFAIDDFGSGFSSFHYIKRFPIDIVKIEGDFIRSMVKNPKDRAFVLSITT 801 Query: 692 LARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQP 732 L + + VAEYVENE I EAV S+GIDY QGY IG+P P Sbjct: 802 LTKNLGIKTVAEYVENEVILEAVKSVGIDYAQGYYIGRPSP 842 >UniRef50_C8VVE0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VVE0_DESAS Length = 738 Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 89/249 (35%), Positives = 146/249 (58%), Gaps = 10/249 (4%) Query: 488 RELKDKVAMMNRL----QQALEHNHFFLMAQPITGM--RGDVYHEILLRMKGENDELISP 541 + ++K+ M N+L ++AL N F ++ QPI + R ++ E LLR+K ++ LISP Sbjct: 475 EDTEEKLTMTNQLISLIKKALRDNLFEIVFQPIVKVAHRDIIHFEALLRLKDDHGHLISP 534 Query: 542 DSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQ 601 F+PVA FG+ + ID+WV++ + + R F IN+S TS+ R + Sbjct: 535 GHFIPVAERFGMMAQIDLWVLQSVIDTL---RMHEGISIF-INISGTSLSNERLLNQFES 590 Query: 602 LLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNV 661 ++ +E +L FE+TE+ A ++ +A+ ++ L+ LGC+ AIDDFG G++S++ L+ + Sbjct: 591 IVLNSSVEPSRLGFEITETAAARDMIKAEQWIRKLKRLGCKFAIDDFGIGFSSFSYLRLL 650 Query: 662 NADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDY 721 D LKIDGSFI NI + + +V ++ +A +AE+VENE I + + L +DY Sbjct: 651 PVDYLKIDGSFIYNIDQETTNLALVKAMNTVAHTLDKKTIAEFVENENILQILNELDVDY 710 Query: 722 MQGYLIGKP 730 QGY IG P Sbjct: 711 AQGYFIGIP 719 >UniRef50_Q1NMJ1 GGDEF:EAL n=3 Tax=Deltaproteobacteria RepID=Q1NMJ1_9DELT Length = 885 Score = 152 bits (384), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 130/459 (28%), Positives = 210/459 (45%), Gaps = 47/459 (10%) Query: 302 YLVFSFIVNYMAVLATRQRAVVRRIQRLAYV---DPVVHLPNVR--------ALNRALR- 349 ++V +++ + L +A+ + L Y DP+ L N R + RA R Sbjct: 429 HIVLDSVLSTLLNLVGSVKAISKYTHDLEYYATRDPLTQLHNQRMFWELLGYEVGRAQRH 488 Query: 350 DAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRL 409 D P+ AL + + + + YG Q+L+ L + G+ V + G++ + L Sbjct: 489 DYPF-ALIMIDMDNFKTVNDQYGHAFGDMILQQLAEALRQAVRDGDFVARYGGDEFTILL 547 Query: 410 NTESHQERITALDSHLKQFRFFW----DGMPMQPQIGVSYC----YVRSPV-------NH 454 S ++ +T + +K DG+ +Q + + + +S N Sbjct: 548 PETSREQALTVAERIIKSISGMGVLTPDGVRVQATVSLGLAMYPEHGKSAKDLFLVADNM 607 Query: 455 IYLLLGE-LNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMA 513 +Y + GE N +AE PE + R KD+ + R+ QALE Sbjct: 608 MYKVKGEGKNNIAE-------PEEQD------VTRIFKDESEINFRVYQALEEETLLPYF 654 Query: 514 QPITGMR-GDVY-HEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAE 571 QPI + G+V HE+L+R+ + +I+ F+ A GL +D ++E + E Sbjct: 655 QPILDLNSGEVQAHEVLMRIPATDGTMIAASDFIEAAGRIGLLHKLDHILMEKAFKHAGE 714 Query: 572 NRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQI 631 + IN++P S F + +L KY I ++IFEVTE + + NV Q Sbjct: 715 QNYR---GELFINITPKSFIFPEFFPRIKELSHKYGIPPQRIIFEVTERDTIRNVSMLQK 771 Query: 632 TLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICH 691 + ++ G + A+DDFG+GY+S+ LK D LKI+G FIRNI+ + SI Sbjct: 772 FVTRMKSEGYRFAVDDFGSGYSSFKYLKLFPIDYLKIEGEFIRNILDDHDFMAYTKSIIT 831 Query: 692 LARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKP 730 LAR K+ VAE+VE+E I A LG+DY QGY IG+P Sbjct: 832 LARELKVKTVAEFVEDERIMTACRELGVDYGQGYHIGRP 870 >UniRef50_Q1K3N9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K3N9_DESAC Length = 657 Score = 152 bits (383), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 85/250 (34%), Positives = 142/250 (56%), Gaps = 7/250 (2%) Query: 488 RELKDKVAMMNRLQQALEHNHFFLMAQPITGM-----RGDVYHEILLRMKGENDELISPD 542 R+L ++ + +++AL N FFL Q I + D Y E+LL M+ + ++P+ Sbjct: 391 RKLNRQIRALPFIREALHRNLFFLRRQKICPVGNVEPHSDCY-EVLLSMQLADGSSLAPE 449 Query: 543 SFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRF-AINLSPTSVCQARFPVEVSQ 601 FL A + L SID WVI H ++ E+ + F AINLS S F + Sbjct: 450 EFLTAAERYDLMPSIDRWVINHCFDWLEEDGERWKNLDFMAINLSGKSFNDPTFLAYLET 509 Query: 602 LLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNV 661 L + A ++ FE+TE+ A+ N +++ + ++ GC+ A+DDFG+G +S+ LKN Sbjct: 510 KLRRATFPAEKICFEITETAAVENEERSVTFIHRIKRFGCRFALDDFGSGMSSFRYLKNF 569 Query: 662 NADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDY 721 D++KIDGSFI ++V N L +IV SI ++A + VAE+ E+++ + + +G+DY Sbjct: 570 PVDVIKIDGSFIVDMVENELSREIVTSIHNIASALGLKTVAEHAEDQQTLQVLQEIGVDY 629 Query: 722 MQGYLIGKPQ 731 +QGY++ KP+ Sbjct: 630 VQGYVVEKPK 639 >UniRef50_A4A3V9 Sensory box/GGDEF/EAL domain protein n=2 Tax=unclassified Gammaproteobacteria RepID=A4A3V9_9GAMM Length = 1349 Score = 152 bits (383), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 90/256 (35%), Positives = 145/256 (56%), Gaps = 7/256 (2%) Query: 492 DKVAMMNRLQQALEHNHFFLMAQPI-----TGMRGDVYH-EILLRMKGENDELISPDSFL 545 ++ + RL A+ + L AQPI G G +H EILL ++ ++ EL SP F+ Sbjct: 1089 ERASSRKRLDDAMSTDSLVLRAQPIVQSAVDGREGAKHHYEILLSLRDDDGELQSPQDFI 1148 Query: 546 PVAHEFGLSSSIDMWVIEHTLQFMAE-NRAKMPAHRFAINLSPTSVCQARFPVEVSQLLA 604 A FG + +D WV++ +++ A+ +INLS TS+ F V + ++ Sbjct: 1149 MSAERFGYVTLVDRWVLKEAFSWISRLMDAQKVVPELSINLSGTSITDNDFLDYVLEQIS 1208 Query: 605 KYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNAD 664 ++ + +L FE+TE+ A+ N+ +A ++ L+ +GC+ ++DDFGTG AS+ LK + D Sbjct: 1209 EHGVGTSRLCFEITETGAIDNLPRAADFVRTLKNIGCKFSLDDFGTGLASHKYLKELPVD 1268 Query: 665 LLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQG 724 +KIDG+FI +I N+ DY + SI LA VAE VE+ EI A+ +GIDY+QG Sbjct: 1269 YVKIDGTFITDIHRNATDYAMTKSINDLAHFLGQKTVAECVEDLEIVPALREIGIDYLQG 1328 Query: 725 YLIGKPQPLIDTLNEI 740 + IG P+ L + E+ Sbjct: 1329 WGIGMPRELHEITEEL 1344 >UniRef50_B9YY70 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9YY70_9NEIS Length = 1054 Score = 151 bits (382), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 93/248 (37%), Positives = 137/248 (55%), Gaps = 2/248 (0%) Query: 486 LQRELKDKVAMMNRLQQALEHNHFFLMAQPITGM--RGDVYHEILLRMKGENDELISPDS 543 L ++ +++ + N L+QALE +L+ QP + R V E LLR + LISP Sbjct: 790 LNAQVAERLTLENHLRQALERQQLYLVYQPQFAIDNRRLVGCEALLRWQHPEQGLISPAR 849 Query: 544 FLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLL 603 F+P+A E GL I WV++ + A A R A+N+S + Q EV L Sbjct: 850 FIPLAEETGLIVEIGRWVLDEACRQAAAWLAAGTPLRVAVNVSARQLGQPDLLAEVEAAL 909 Query: 604 AKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNA 663 A++++ + L EVTES + + +QA LQ +E G +A+DDFGTGY+S LK + Sbjct: 910 ARHRLPSCWLELEVTESTLMEDAEQAVRHLQAFKERGIHLAVDDFGTGYSSLTYLKRFSP 969 Query: 664 DLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQ 723 DL+KID +F+ N+ N D IV++I LA M +AE VE+EE + + G D +Q Sbjct: 970 DLIKIDRAFVMNLPDNRDDAAIVSAIVQLAEALGMQTLAEGVESEEQLDFLAQAGCDVVQ 1029 Query: 724 GYLIGKPQ 731 GYL G+PQ Sbjct: 1030 GYLTGRPQ 1037 >UniRef50_B1Y3Y1 Diguanylate cyclase/phosphodiesterase n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y3Y1_LEPCP Length = 730 Score = 151 bits (382), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 135/485 (27%), Positives = 228/485 (47%), Gaps = 34/485 (7%) Query: 268 LLWAVVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQ 327 L AV L I + + P+ P + ++ + + + + + LA R+ RI Sbjct: 229 LRSAVTLAGHISAGRIDTPLPPAASDEVGVLTQA------MDDMRQNLARREA----RIA 278 Query: 328 RLAYVDPVVHLPNV--------RALNRALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQY 379 LAY D + L N +AL A R ++ L + + + G L Q Sbjct: 279 ELAYRDDLTGLANRTLFNDRLDQALASARRQGNALSVLVLDLDRFKQVNDVLGHTLGDQV 338 Query: 380 KQKLSHWL-SPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLKQFRFFWDGMPMQ 438 +++ L + L+ + V +L+G++ A+ L T+ H TAL L +P+Q Sbjct: 339 LKEVGERLRNALMRTTDTVARLAGDEFAVLLPTQDHAA-ATALGRRL--LSVLESPVPVQ 395 Query: 439 PQ-IGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMY----LQRELKDK 493 Q + VS + + L +L A++++ N RG + ++R ++ Sbjct: 396 GQRVDVSASIGIACADDAGLSAAQLMARADIAMHEAKQGN---RGLLVFEAAMERHVEHG 452 Query: 494 VAMMNRLQQALEHNHFFLMAQP---ITGMRGDVYHEILLRMKGENDELISPDSFLPVAHE 550 + +++ L++A + + FFL+ QP ++ D E+L+R + ++ PD F+P A + Sbjct: 453 LTLLSDLRRAADQHEFFLLYQPKLRLSDGHCDAA-EVLIRWRHPQRGIVPPDRFIPFAEQ 511 Query: 551 FGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEA 610 G +I +WV++H L +A + IN+S + Q FP V L + + A Sbjct: 512 TGAIKAITLWVLQHALNQLASWQQLGWQLSLNINVSTRDLGQPDFPALVDNALRRAGVAA 571 Query: 611 WQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDG 670 L EVTES + + QA LQ L E+G +++IDDFGTGY+S A LK + LKID Sbjct: 572 ASLCLEVTESAIMDDPAQALRCLQALNEMGVRLSIDDFGTGYSSLAYLKKLPVQELKIDR 631 Query: 671 SFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKP 730 SF+ + + D IV S LA + VVAE +E E + + + S G D QGYL +P Sbjct: 632 SFVSGLDRDEADVTIVRSTIDLAHHMGLAVVAEGIETEAVSQRLRSFGCDQAQGYLYSRP 691 Query: 731 QPLID 735 P ++ Sbjct: 692 LPAME 696 >UniRef50_Q3ILC0 Putative orphan protein ; putative sensory-box domain n=3 Tax=Alteromonadales RepID=Q3ILC0_PSEHT Length = 843 Score = 151 bits (382), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 92/247 (37%), Positives = 144/247 (58%), Gaps = 8/247 (3%) Query: 500 LQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSI 557 ++QAL+ + L QPI R + Y E+LLR+K NDEL+ P+ F+P + + Sbjct: 588 IRQALQQDSIELHYQPIWDFRRNEVAYFEVLLRLKI-NDELVFPNQFIPSLEMLNDTFLM 646 Query: 558 DMWVIEHTLQFMAENRAKMPA-HRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFE 616 D VI +T+ N A P ++ AINLS S R + LAKYQ+ Q+IFE Sbjct: 647 DQCVIRNTI----ANVALYPELNQVAINLSAQSFLDERLVPLIESNLAKYQVLPTQIIFE 702 Query: 617 VTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNI 676 +TES ++ N+ + ++ L LGC +IDDFGTG++++ LK + A +KIDGSF+ ++ Sbjct: 703 ITESASINNLAATRKMIEKLNILGCHFSIDDFGTGFSTFNYLKQLPAQHVKIDGSFVCDM 762 Query: 677 VSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDT 736 +++ +D +V +I ++ VAEYVE EE+ A+ +G+DY QGY I +P P+ Sbjct: 763 LNDPIDLALVKAINDISHSLDKRSVAEYVETEEVFFALKEIGVDYGQGYFIARPMPIKGV 822 Query: 737 LNEIEPI 743 +E+E I Sbjct: 823 KSELEKI 829 >UniRef50_C9R830 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ammonifex degensii KC4 RepID=C9R830_AMMDK Length = 469 Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 85/244 (34%), Positives = 137/244 (56%), Gaps = 11/244 (4%) Query: 497 MNRLQQALEHNHFFLMAQPITGMRGD---VYHEILLRMKGENDELISPDSFLPVAHEFGL 553 + +++ AL F L+ QP+ + GD +Y+E LLRM+ E+ LI P SF+PVA FGL Sbjct: 225 LGQIKSALRKEGFVLLFQPVVSV-GDARIIYYEALLRMRAEDGSLIPPGSFIPVAERFGL 283 Query: 554 SSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQL 613 ID WV+ ++ + N P + +NLS SV + +++ +A+ I QL Sbjct: 284 MPQIDCWVVRTAVKVLRGN----PDLKLFVNLSGASVGDEKVLECITRAVAESGINPRQL 339 Query: 614 IFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADL---LKIDG 670 FE+TE+ + ++A+ L L+ LGC+ A+DDFGTGY+S++ + D LKI G Sbjct: 340 GFEITETAVAKDFERARGWLAELRNLGCRFALDDFGTGYSSFSLFGLLAEDFLDYLKIAG 399 Query: 671 SFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKP 730 F+R V +V ++ +A VAE+VE+E V +G+D++QG+ +G+P Sbjct: 400 PFVREAVKKPSFKSVVQAMTTVAAAFGKETVAEWVEDEAAFTLVKEVGVDHVQGFYLGEP 459 Query: 731 QPLI 734 QP + Sbjct: 460 QPGV 463 >UniRef50_Q1Q2M0 Putative uncharacterized protein n=2 Tax=Bacteria RepID=Q1Q2M0_9BACT Length = 1069 Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 87/270 (32%), Positives = 145/270 (53%), Gaps = 5/270 (1%) Query: 474 APENMQRRGAMYLQRELKDKVAMMN---RLQQALEHNHFFLMAQPITGMRGD--VYHEIL 528 A E+ + R ++ Q + A +N R++ AL+++ F L QP+ + + +E L Sbjct: 800 AKESGRNRFCVFSQEQKTHIEAQINWEKRIRNALDNDRFVLHLQPVIDLSNKNIIGYEAL 859 Query: 529 LRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPT 588 LRM GE DELI P FL +A FGL ID WV+ ++ AE + INLS Sbjct: 860 LRMLGEKDELIFPAEFLSIAERFGLIRDIDRWVVCSAIRLAAEQQFSDRGIFLDINLSGK 919 Query: 589 SVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDF 648 + + + ++FE+TE+ + N+ AQ L L+ + C+ ++DDF Sbjct: 920 AFADTELLGIIKHQFNTSGTKPGSIVFEMTETAMMENMIAAQDFLAALKHMDCRFSLDDF 979 Query: 649 GTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENE 708 G+G++S+ L+++ D LKIDGSFI ++ +N +D +V +I LA K VAE+ ++ Sbjct: 980 GSGFSSFNYLRHLTVDYLKIDGSFINDLPNNPVDQHMVKAIVELAHGLKKRTVAEFADSG 1039 Query: 709 EIREAVLSLGIDYMQGYLIGKPQPLIDTLN 738 + + + LG++Y QG IGKP+ + + N Sbjct: 1040 DTLQLLRKLGVNYAQGNYIGKPRSVSEVFN 1069 >UniRef50_Q9I310 Uncharacterized signaling protein PA1727 n=74 Tax=Proteobacteria RepID=Y1727_PSEAE Length = 685 Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 126/440 (28%), Positives = 208/440 (47%), Gaps = 29/440 (6%) Query: 313 AVLATRQRAVVRRIQRLAYVDPVVHLPN--------VRALNRALRDAPWSALCYLRIPGM 364 +VLAT R + +LA D + LPN +A+ +A+RD A+ ++ + G Sbjct: 246 SVLATSLARANRELIQLALHDNLTKLPNRMLLDDRLEQAIQQAIRDDRRFAVLFMDLDGF 305 Query: 365 EMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSH 424 + + YG L +++ + + + + +L G++ L + + T + Sbjct: 306 KAVNDAYGHHLGDLLLIEVAERIRANVRAQDTIARLGGDEFVLLIEAREPADAATLAEKL 365 Query: 425 LKQFRFFWDGMPMQP-QIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAP----ENMQ 479 +K+ QP QI + + + I L G+ T EL I +A ++ Sbjct: 366 VKRIS--------QPYQISRHEVRISASIG-IALYPGDGQTRHELMINADAAMYHAKDQG 416 Query: 480 RRGAMYLQREL----KDKVAMMNRLQQALEHNHFFLMAQP-ITGMRGDVYH-EILLRMKG 533 R G + + + ++++ +++ L+QALE L QP + G + E LLR + Sbjct: 417 RNGYCFFESSMNANAQEQLQLLHDLRQALERRQLVLHYQPKVLAPNGPMIGVEALLRWEH 476 Query: 534 ENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAH-RFAINLSPTSVCQ 592 LI+P FLP+A + GL I WV++ + M A A+NLS Sbjct: 477 PQHGLITPGQFLPLAEKTGLIVQIGEWVLDEACRQMRLWLDGGHADWNIAVNLSALQFAH 536 Query: 593 ARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGY 652 A V L ++ +E LI EVTES A+ + + + L+ L +G I+IDDFGTGY Sbjct: 537 AGLVDSVRNALLRHSLEPSHLILEVTESTAMRDADASLVILEQLSAMGVGISIDDFGTGY 596 Query: 653 ASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIRE 712 +S LK + A LKID FI + +S D IV++I L R + +VAE VE E +E Sbjct: 597 SSLLYLKRLPASELKIDRGFINELAHDSDDAAIVSAIVALGRTLNLKIVAEGVETEAQQE 656 Query: 713 AVLSLGIDYMQGYLIGKPQP 732 + LG + +QG+L+G+P P Sbjct: 657 FLTRLGCNSLQGFLLGRPMP 676 >UniRef50_C4I4I7 Sensory box/ggdef/eal domain protein n=36 Tax=Burkholderia RepID=C4I4I7_BURPS Length = 872 Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 88/242 (36%), Positives = 134/242 (55%), Gaps = 11/242 (4%) Query: 498 NRLQQALEHNHFFLMAQPITGMRGDVY----HEILLRMKGENDELISPDSFLPVAHEFGL 553 R++ ALE++ F L QPI R D E+LLRM ISP +FLP A +GL Sbjct: 629 RRIKTALENDGFRLYVQPIVHTRPDSRTPERAEVLLRMMDSAGRDISPAAFLPAAERYGL 688 Query: 554 SSSIDMWVIEHTLQFMAENRAKMPA---HRFAINLSPTSVCQARFPVEVSQLLAKYQIEA 610 ID WVI + ++ +PA H + +NLS S+ RF V L +E Sbjct: 689 MGLIDRWVIRTVFRKLS----ALPAREYHEYNVNLSGASISDERFLEFVIAELLSSGLEP 744 Query: 611 WQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDG 670 + FE+TE+ A+ N++ A + L+ +GC+ A+DDFG G +S+ L+++ D LKIDG Sbjct: 745 SVICFEITETIAVKNLELASRFMGELRTIGCRFALDDFGAGMSSFRYLRSLPIDYLKIDG 804 Query: 671 SFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKP 730 F+ N++S+ + Y +V++I +A + VAE+VE+E + LGID+ QGY +P Sbjct: 805 EFVSNMMSDRVSYGVVSAINEVAHSMRCSTVAEHVESEVELAMLRELGIDFCQGYFFAQP 864 Query: 731 QP 732 P Sbjct: 865 SP 866 >UniRef50_Q1N0U8 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) n=1 Tax=Bermanella marisrubri RepID=Q1N0U8_9GAMM Length = 625 Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 81/240 (33%), Positives = 142/240 (59%), Gaps = 4/240 (1%) Query: 497 MNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLS 554 ++ + +AL + F L Q + + D Y+EILLR+K + + +P + + A ++ + Sbjct: 386 VHEINRALTEDRFTLYKQKVQRIASDKNYYYEILLRLKNPDGSISAPGAIIAAAEKYNIM 445 Query: 555 SSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLI 614 ID WV+ +T+ ++A+ + + FAINLS ++ + L+ YQI +L Sbjct: 446 GKIDYWVLRNTIAYLADYPEEQAS--FAINLSGATLSDPSCINYLQHLIDTYQITPSRLQ 503 Query: 615 FEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIR 674 FE+TE+ A+ ++ I L L+++GC+I++DDFGTG +S++ L+ + LKIDG FI+ Sbjct: 504 FEITETEAVKHLSTTNIILSALRDMGCRISLDDFGTGSSSFSYLQQMKIQNLKIDGVFIK 563 Query: 675 NIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLI 734 ++ NS++ IV S +A+ + AE+VE EE+ + L +DY+QG+ I KP+PLI Sbjct: 564 DLHHNSVNQAIVESAVKVAKSMGISTTAEFVETEEVVALLKELQVDYVQGFGIHKPEPLI 623 >UniRef50_C6P1A0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1A0_9PROT Length = 1011 Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 136/476 (28%), Positives = 224/476 (47%), Gaps = 43/476 (9%) Query: 287 IYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNR 346 +YP + T + + V +++ M + A++ A I+ LA+ DP+ LPN R L Sbjct: 540 VYPEHLTITAVKDAGGNVVNYVATLMDITASK--ASEEEIRNLAFFDPLTRLPNRRLLQD 597 Query: 347 AL--------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVY 398 L R A+ ++ + + L G + +K++ LS + G+ V Sbjct: 598 RLQQALASCGRSGKSGAILFIDLDNFKNLNDTLGHDIGDLLLEKVAIRLSSCVREGDTVA 657 Query: 399 QLSGNDLALRLNTESHQ-----ERITALDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPV- 452 ++ G++ + L S E+ ++ S + + + Q+G+ + Y SP Sbjct: 658 RIGGDEFVVMLEDLSDNILDAAEQTESVGSKI------LASLNVPYQLGI-HTYDNSPSI 710 Query: 453 -----NHIYLLLGELNTVAELSI--VTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALE 505 N + + EL A++++ A N R +Q+ L ++A+ L++A+E Sbjct: 711 GATLFNDNHNSIDELLKQADIAMYQAKKAGRNTMRFFDPRMQQSLSARLALELELRKAIE 770 Query: 506 HNHFFLMAQPITGMRGDVYH-----EILLRMKGENDELISPDSFLPVAHEFGLSSSIDMW 560 + F L Q ++ D H E LLR L++P F+P+A E GL I W Sbjct: 771 KDQFQLYYQ----IQVDETHRPLGAEALLRWMHPEHGLMAPAEFIPMAEETGLIVPIGWW 826 Query: 561 VIEHTLQFMAENRAKMPAHR---FAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEV 617 V+E T + K P R +IN+S Q F +V + Y I+ L E+ Sbjct: 827 VLE-TACTQLKAWEKDPLTRNLVLSINVSAKQFHQPDFVDQVQAAVDHYGIDPALLKLEL 885 Query: 618 TESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIV 677 TES L NV + L++ G ++DDFGTGY+S LK + D LKID SF++ I Sbjct: 886 TESILLENVDTTIKRMSALKKTGVGFSLDDFGTGYSSLQYLKRLPLDQLKIDQSFMQEIT 945 Query: 678 SNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPL 733 S+S D IV++I +A+ +M V+AE VE EE R+ +L G ++ QGYL KP P+ Sbjct: 946 SDSSDMAIVSTIIAMAQSMQMGVIAEGVETEEQRQLLLRKGCNHFQGYLFSKPVPV 1001 >UniRef50_A8UVA1 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UVA1_9AQUI Length = 711 Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 117/456 (25%), Positives = 225/456 (49%), Gaps = 43/456 (9%) Query: 303 LVFSFIVNYMAVLATRQ--RAVVRRIQRLAYVDPVVHLPNVRA--------LNRALRDAP 352 +V F+ M+VL + + R I+ A DP+ L N R + RA R Sbjct: 269 VVEGFLPALMSVLGSAKALEEYARNIEYYATRDPLTGLYNQRVFWELLEYEIERAQRRGY 328 Query: 353 WSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTE 412 A+ + + +++ YG ++ ++ + + + V + G++ + L Sbjct: 329 SFAVLMIDLDNFKVINDTYGHDFGDKFLREFAKLMRKTFRREDIVARYGGDEFVVILPYA 388 Query: 413 SHQERITALDSHLKQFRFFW----DGMPMQ----------PQIGVSYCYVRSPVNHI-YL 457 S +E + + +++ F+ DG P++ PQ G S + ++I Y Sbjct: 389 SEEEALRSARRFIEELDNFYVEAPDGKPIKATVSIGIALYPQHGESTQELFLTADNIMYR 448 Query: 458 LLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPIT 517 E + L T+ +R G KV ++ + +ALE QPI Sbjct: 449 AKAEGKSRVMLPTDTDLTRTAEREG----------KVGIL--VLEALEKELVLPAFQPIV 496 Query: 518 GMR-GDVY-HEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAK 575 + GDV+ +E+L+R++ E+ +L++ F+ VA G+ +D +++ L+ + E Sbjct: 497 DTKTGDVHAYEVLMRIR-EDGKLVNASRFIHVAERMGIIHRLDHLLMDRALEKVKETDF- 554 Query: 576 MPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQH 635 + R NLSP S+ F +V +L+ K+ + +++FE+TE + + ++ + + Sbjct: 555 --SGRLFFNLSPRSLVLEDFLKDVIELVEKHDFDPDRMVFEITERDTVKSIDLLKGFAES 612 Query: 636 LQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARM 695 L+ G A+DDFG+G+AS+ LK++ D +KI+G F+R+I+S+ +D V SI LA Sbjct: 613 LKREGFHFAVDDFGSGFASFLYLKHLPVDYVKIEGEFVRSILSSKMDRAFVISIIALAET 672 Query: 696 KKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQ 731 ++ +AE+VE+EE+ +A+ +G++Y+QGY +GKP+ Sbjct: 673 LEIKTIAEFVESEEVFKAMKGVGVNYVQGYYVGKPR 708 >UniRef50_C6XBN5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XBN5_METSD Length = 782 Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 89/253 (35%), Positives = 141/253 (55%), Gaps = 8/253 (3%) Query: 486 LQRELKDKVAMMNRLQQALEHNHFFLMAQPI--TGMRGDV----YHEILLRMKGENDELI 539 L + ++++ +RL+QA+ F L QPI G G E L+R + ++ LI Sbjct: 511 LTQRAQERLMTESRLRQAIRDKAFVLHYQPIYTKGEDGGAPSIFSCECLIRWQQDDGSLI 570 Query: 540 SPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRF--AINLSPTSVCQARFPV 597 PD F+P A E GL I WV++H +AE A++P + A+N+S C A F + Sbjct: 571 YPDLFIPCAEETGLIIPIGEWVLDHACAQLAEWDARLPDNTLSMAVNISARHFCDANFVM 630 Query: 598 EVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYAR 657 V ++L ++ I +LI E+TE+ + + A TL+ L G +IA+DDFGTG++S A+ Sbjct: 631 TVHEVLKRHAIAPARLIIEITENAVMDRMDIAIPTLETLVRTGVRIALDDFGTGHSSLAK 690 Query: 658 LKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSL 717 LK + LKID F+++I ++ D Q+ ASI +A+ + VAE VE +E + + Sbjct: 691 LKTLPIHALKIDREFVKDIPDSTDDMQLAASIIRMAQGLHLQTVAEGVETQEQYDFLAQA 750 Query: 718 GIDYMQGYLIGKP 730 G D QGYL+ +P Sbjct: 751 GCDKFQGYLLSRP 763 >UniRef50_C6WWW7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WWW7_METML Length = 944 Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 85/248 (34%), Positives = 139/248 (56%), Gaps = 2/248 (0%) Query: 485 YLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDV--YHEILLRMKGENDELISPD 542 +LQ++L+ KV +R++QAL F + QPI + +V ++E L+RM EN ++ P Sbjct: 692 HLQQKLEQKVLWEDRIKQALREQSFVMQYQPILDIHQNVISHYEALVRMVDENGAMVPPG 751 Query: 543 SFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQL 602 F+ A GL ID +V+ ++ AE A+ + AINLS S+ + L Sbjct: 752 EFIEFAERSGLIKQIDHYVVRTVIKRWAELLAEGKDRKVAINLSGHSMNDENMLTLLQSL 811 Query: 603 LAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVN 662 ++ +IFE+TE+ A+ + AQ ++ ++ LGC ++DDFG G++S+ +K+ Sbjct: 812 FLQHPELPSHIIFEITETAAVADFATAQTFIETIRALGCAFSLDDFGVGFSSFYYVKHFP 871 Query: 663 ADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYM 722 D +KIDGSFIRN+ ++ D V ++ +AR VAE+V ++ + S G+DY Sbjct: 872 VDYVKIDGSFIRNLADSTDDQIFVRALTEVARGFGKRTVAEFVGDQRCLTLLRSYGVDYA 931 Query: 723 QGYLIGKP 730 QGY IGKP Sbjct: 932 QGYFIGKP 939 >UniRef50_B1WR61 Putative uncharacterized protein n=1 Tax=Cyanothece sp. ATCC 51142 RepID=B1WR61_CYAA5 Length = 700 Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 85/244 (34%), Positives = 141/244 (57%), Gaps = 5/244 (2%) Query: 492 DKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAH 549 +++ + + L++ALE F+L QPI + + E LLR ISP +F+P+A Sbjct: 425 ERLEVESSLRKALEKQEFYLYYQPIISFKTSQLIGFEALLRWHHPTQGWISPATFIPIAE 484 Query: 550 EFGLSSSIDMWVIEHTLQFMAENRAKMPAH---RFAINLSPTSVCQARFPVEVSQLLAKY 606 E GL S+ WV++ ++ ++ P + ++N+S + Q F +V ++L + Sbjct: 485 ETGLIVSLGQWVLQEACHQISIWQSHFPFSEPLKVSVNISSFQLNQMDFVEQVKKVLEES 544 Query: 607 QIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLL 666 +I+A QL E+TE+ + N++ LQ LQ+LG +I+IDDFGTGY+S L+ + D+L Sbjct: 545 KIKASQLNLEITETVIMNNIESTSFKLQCLQKLGVKISIDDFGTGYSSLNYLQQLPIDIL 604 Query: 667 KIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYL 726 KID SF+R + SN ++QI+ +I L + M +AE +E E + SLG+DY QG++ Sbjct: 605 KIDRSFVRRLESNPSEFQIIEAIIKLGNILGMETLAEGIETSEQYNLIQSLGVDYAQGFI 664 Query: 727 IGKP 730 KP Sbjct: 665 FSKP 668 >UniRef50_B3PCW8 Sensory box/GGDEF domain/EAL domain protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PCW8_CELJU Length = 850 Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 90/240 (37%), Positives = 136/240 (56%), Gaps = 2/240 (0%) Query: 493 KVAMMNRLQQALEHNHFFLMAQPITGMRGDVYH--EILLRMKGENDELISPDSFLPVAHE 550 ++AMM+ L +A+ N L QP + + E L+R + PD F+P+A Sbjct: 589 RLAMMSELGRAIRENQLCLYYQPKVVLDECRCYGFEALIRWIHPELGFVPPDDFIPIAEF 648 Query: 551 FGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEA 610 L + WV+E++++ + + A+NLS ++ P V +LL KYQ+ A Sbjct: 649 TSLIHPLTAWVLENSIEQCRHWQLQGLNLSVAVNLSARNLMDENIPKLVERLLNKYQLPA 708 Query: 611 WQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDG 670 +L E+TES+ +++ +A LQHL ELG ++IDDFGTGY+S A LK + LKID Sbjct: 709 ARLELEITESSIMSDPNRALRILQHLHELGVHLSIDDFGTGYSSLAYLKRLPVQTLKIDN 768 Query: 671 SFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKP 730 SF+RN++ + D IV S HLA + VVAE VENEE+ + + +G D +QGY IG+P Sbjct: 769 SFVRNMLGDLQDELIVNSTIHLAHNLGLTVVAEGVENEELMKRLHDMGCDEVQGYFIGRP 828 >UniRef50_B0TEB0 Pas sensor diguanylate cyclase/phophodiesterase n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TEB0_HELMI Length = 576 Score = 149 bits (375), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 123/447 (27%), Positives = 217/447 (48%), Gaps = 36/447 (8%) Query: 311 YMAVLA---TRQRAVVRRIQRLAYVDPVVHLPNV----RALNRALR---DAPWSALCYLR 360 Y+A +A + Q+ + ++ LA D + +PN AL+RA R + S+L + Sbjct: 122 YVAGVARDLSEQKETEKHLKHLATHDYLTGIPNRYYFDGALSRARRLAKEGTVSSLLLID 181 Query: 361 IPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLN--TESHQERI 418 + ++ + + LS L + + + +LSG++ L L+ E+ E++ Sbjct: 182 VDKFNLVNDLLDHDMGDRLLTNLSRLLKSQIRRDDVLARLSGDEFGLLLHGMAEAEAEKV 241 Query: 419 TALDSHLKQFRFFW---DGMPMQ--PQIGVSYCYVRSPVNHIYLLLGELNTVAELS---- 469 H+ + R +G ++ IGV+ V + G +A+++ Sbjct: 242 ALNLCHIVKERDLCPVLEGCDLRFTVSIGVAEINGHQDVRQVLSRAGAALHMAKMAGRSQ 301 Query: 470 -IVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPIT-GMRGDVYH-E 526 +V A E M R L++ ++ ++ A F L P+ G V H E Sbjct: 302 VVVAYANERMFSR--------LEETSRLIQIVRGADREGRFQLFFMPVVRSSDGAVEHYE 353 Query: 527 ILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLS 586 LLR++ + +LI P +F+PVA FGL I+ WV+ ++F+ +N P R +NLS Sbjct: 354 ALLRLRDGDGKLIPPATFIPVAESFGLMGDIERWVVAEAVRFLVKN----PQLRLYVNLS 409 Query: 587 PTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAID 646 S+ + +++ +L FE+TE+ A+ ++ A+ +Q L+ LGC+ A+D Sbjct: 410 GESLGDKEILNFIEEIVQTTPAIHGRLGFEITETAAVRDLMSAEQWVQKLRSLGCRFALD 469 Query: 647 DFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVE 706 DFG+GY+S+A L + D +KIDGSF+R+I + + +V I L ++EYVE Sbjct: 470 DFGSGYSSFAYLNKLPVDFIKIDGSFVRSIDHDPERHALVKGINQLVHSLGKRTISEYVE 529 Query: 707 NEEIREAVLSLGIDYMQGYLIGKPQPL 733 N+ I + +GI+Y QGY +G+P PL Sbjct: 530 NDRIWRLIREMGIEYGQGYYLGEPSPL 556 >UniRef50_Q0G4W7 Diguanylate cyclase/phosphodiesterase n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0G4W7_9RHIZ Length = 489 Score = 148 bits (374), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 129/444 (29%), Positives = 199/444 (44%), Gaps = 45/444 (10%) Query: 324 RRIQRLAYVDPVVHLPNVRA----LNRALRDAPWSA-----LCYLRIPGMEMLVKNYGIM 374 R+ ++ A D + LPN RA + + RD+ A + I +++ +G Sbjct: 39 RKARKSALTDELTGLPNRRAFSGHIEQYFRDSGSKAETKVAMLLFDIDNFKLVNDEHGHE 98 Query: 375 LRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHL-----KQFR 429 Q + S + + P +L G++ A+ + E +ER + S L K + Sbjct: 99 GGDQLLRAFSERILEAVGPECLFARLGGDEFAIAMFGEEAEERSREMASRLSVLSKKPYE 158 Query: 430 FFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTV------AELSIVTNAPENMQRRGA 483 + IG C G L V A++++ NA EN +R A Sbjct: 159 CAGRTLVATSSIGGVACG------------GNLADVPAIMRRADIALY-NAKEN-KRSAA 204 Query: 484 MYLQRELK----DKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDE 537 + ++ + A+M L+ A+E L QPI + V E LLR + + Sbjct: 205 CFYDESMELVVTKRAALMRDLRHAVEKGELVLHFQPIVDLADSKLVSFEALLRWRHPSRG 264 Query: 538 LISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAH-RFAINLSPTSVCQARFP 596 +SP F+P+A E GL I +WVIE A P H RFAINLSP R Sbjct: 265 FVSPGEFIPIAEESGLILPIGLWVIEEACSVAA----TWPEHIRFAINLSPRQFSDERLI 320 Query: 597 VEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYA 656 V L K + +L E+TE+ + + +A L+ L+ G +IA+DDFGTG+AS + Sbjct: 321 PTVLGALEKNGVGPARLTVELTETAIIEHDGKALAALRKLRSEGVKIALDDFGTGFASLS 380 Query: 657 RLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLS 716 L D++KID SF+R N+ +++SIC LA + VAE +E+ + E V Sbjct: 381 YLTKFPFDVVKIDQSFVREASRNNNADVVISSICDLAARLGLDTVAEGIESLDHLELVRK 440 Query: 717 LGIDYMQGYLIGKPQPLIDTLNEI 740 G + QGYL G+P+P ID I Sbjct: 441 AGCNRGQGYLFGRPEPAIDCSTRI 464 >UniRef50_B0TL03 Diguanylate cyclase/phosphodiesterase n=1 Tax=Shewanella halifaxensis HAW-EB4 RepID=B0TL03_SHEHH Length = 574 Score = 148 bits (374), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 82/252 (32%), Positives = 141/252 (55%), Gaps = 12/252 (4%) Query: 493 KVAMMNRLQQALEHNHFFLMAQPITGMRG---DVYHEILLRMKGENDELISPDSFLPVAH 549 +V + +L AL N F + AQ I + G + E+L+R+K E+ +ISP F+P A Sbjct: 305 EVEWLGKLNWALASNQFVIYAQKICAIGGGEESSHFEVLIRLKDEDGMIISPGVFIPPAE 364 Query: 550 EFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIE 609 + L ID WV++ T + P+ ++INLS ++ + LL Y + Sbjct: 365 RYDLMPDIDRWVLKATFSKIT------PSCNYSINLSGQTLSDDSLINYIENLLDTYNVN 418 Query: 610 AWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKID 669 Q+ FE+TE+ A+ + + + L++ G ++DDFG+G +S++ LK + + LKID Sbjct: 419 PKQICFEITETAAIQELDKTVALISCLKQKGFCFSLDDFGSGLSSFSYLKKLPVNYLKID 478 Query: 670 GSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGK 729 G F+++I ++S+ Y +V SI + + +AE+VE+E I + +G+DY+QGY I + Sbjct: 479 GDFVKDIATDSVSYAMVKSINEVGHTMGLKTIAEFVESEAILAKLTEIGVDYVQGYYIHE 538 Query: 730 PQP---LIDTLN 738 PQP L +T+N Sbjct: 539 PQPFEKLCNTVN 550 >UniRef50_Q73RG0 HAMP domain/GGDEF domain/EAL domain protein n=1 Tax=Treponema denticola RepID=Q73RG0_TREDE Length = 801 Score = 148 bits (373), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 79/248 (31%), Positives = 137/248 (55%), Gaps = 8/248 (3%) Query: 497 MNRLQQALEHNHFFLMAQPITGMRGDVYH----EILLRMKGENDELISPDSFLPVAHEFG 552 +N +Q+AL+ ++F L AQ I + D+ H EIL+R+K +D +I PD F+P+A + Sbjct: 544 LNTIQKALKEDNFVLYAQAIMPL-NDLLHRPKYEILIRLKTNDDHIIMPDVFIPIAERYN 602 Query: 553 LSSSIDMWVIEHTLQFMAENRAKMPAHR---FAINLSPTSVCQARFPVEVSQLLAKYQIE 609 L +D WVI + F AE +K + F+IN+S S +++ + Sbjct: 603 LIYEVDKWVIRNAFAFFAEATSKGDLNEDAIFSINISADSFFSNDLVEFIAESRKTLNVP 662 Query: 610 AWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKID 669 A FE+TES A+ N++ + L++ G ++DDFG G++S+ LK + D +KID Sbjct: 663 AHNFCFEITESCAVRNLEATSTFVTELRKQGFSFSLDDFGKGFSSFPYLKTLPIDYVKID 722 Query: 670 GSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGK 729 GSFI++I + +D+ +V ++ + + + EY E ++I + +G+DY QGY K Sbjct: 723 GSFIKSIDKDYIDFSMVKTMRDMCYHLGLYTIGEYAETDKIVSILKDIGVDYGQGYAFQK 782 Query: 730 PQPLIDTL 737 P P+ + + Sbjct: 783 PIPIAEAI 790 >UniRef50_C9Y9D8 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y9D8_9BURK Length = 897 Score = 148 bits (373), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 121/446 (27%), Positives = 209/446 (46%), Gaps = 23/446 (5%) Query: 306 SFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRDA--------PWSALC 357 +F+V + T+QR I+RLA+ DP+ LPN R L +R A AL Sbjct: 441 TFVVTLRDI--TQQRQDEEEIRRLAFYDPLTGLPNRRLLMDRVRQAMVNSARLGQHGALM 498 Query: 358 YLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQER 417 +L + ++L G + + Q++++ L + G+ V +L G++ + L S Sbjct: 499 FLDLDHFKLLNDTLGHDVGDELLQQVAYRLRNCVREGDSVARLGGDEFVVLLEGLSDNRT 558 Query: 418 ITALDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTN---- 473 A + + + D + + P + Y +P I + + + T+ +L + Sbjct: 559 DAANQAEVVAHKIL-DALAL-PYSLRGHGYNSTPSIGIVVFMEDHETMDDLLKKADVAMY 616 Query: 474 ----APENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDVYH-EIL 528 A N R +Q + + ++ L+ + F L Q +G E L Sbjct: 617 QAKAAGRNTARFFDPVMQAAVTTHAELAKEIRLGLQRHEFVLHYQVQIDSQGRCTGAEAL 676 Query: 529 LRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAE-NRAKMPAH-RFAINLS 586 +R L+SP F+P+A E G+ + WV+E Q + E +R M AH A+N+S Sbjct: 677 VRWNHRVRGLVSPAHFIPLAEETGMILPLGEWVMESACQQLVEWSRNPMTAHWTLAVNVS 736 Query: 587 PTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAID 646 + + Q F V + L + A QL E+TES + +V+ + + ++ELG ++D Sbjct: 737 ASQLAQPEFVASVREALQRSGAPAGQLKLELTESMLVDDVEDIIVKMMAIKELGVSFSLD 796 Query: 647 DFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVE 706 DFGTGY+S + LK + LKID SF+R+++++ D I ++ L + V+AE VE Sbjct: 797 DFGTGYSSLSYLKRLPLSQLKIDQSFVRDVLTDPSDAVIARTVVALGHSLGLTVIAEGVE 856 Query: 707 NEEIREAVLSLGIDYMQGYLIGKPQP 732 E R+A+ ++ D QGY G+P P Sbjct: 857 TAEQRDALAAMQCDAFQGYYFGRPAP 882 >UniRef50_B8GU61 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain n=2 Tax=Thioalkalivibrio RepID=B8GU61_THISH Length = 1076 Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 121/438 (27%), Positives = 211/438 (48%), Gaps = 36/438 (8%) Query: 317 TRQRAVVRRIQRLAYVDPVVHLPNV--------RALNRALRDAPWSALCYLRIPGMEMLV 368 TR+R +++ +A D + L N R ++ A R+ AL Y + + + Sbjct: 642 TRERQTAQQLIYMAQHDALTGLYNRHRFQEHLDRMISSAQRNDSRFALLYFDLDEFKYIN 701 Query: 369 KNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLA----LRLNTESHQ--ERITALD 422 +G + + +S L+ GE +L G++ A +R + E Q ERI Sbjct: 702 DTFGHRAGDTVLVRAAGEVSSLVRSGEVFARLGGDEFAVLAEIRHDDEPSQLAERIARAI 761 Query: 423 SHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRG 482 S + FRF + + IG+++ +++ L+ +T + A N + Sbjct: 762 SAIP-FRFRGSNLRLTASIGIAFFPEHG--DNVEDLVAHADTA-----MYQAKSNGKNTW 813 Query: 483 AMYLQRELKDKVAMM-----NRLQQALEHNHFFLMAQPI-TGMRGDVYH-EILLRMK--G 533 ++Y K M R+ QAL L Q I + G++ H E L+RM+ Sbjct: 814 SLYDPSRNHSKAMMARMTWRGRIDQALREESLELHFQGIYSTADGELSHVETLVRMRDPA 873 Query: 534 ENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHR-FAINLSPTSVCQ 592 + + LI P F+PVA + G ID WV+ ++ +A K P R A+N+S S + Sbjct: 874 DGERLIMPGQFIPVAEKTGQILEIDRWVLRQSIGLLA----KHPKLRALAVNISGRSFDE 929 Query: 593 ARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGY 652 P + LL ++ +E +LI E+TE+ A++ ++ AQ ++ L + GC I +DDFG+G+ Sbjct: 930 PGLPQYIQDLLQRHDVEPRRLIVELTETAAVSEMQDAQRFIEALHQTGCLIGLDDFGSGF 989 Query: 653 ASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIRE 712 +++A LK + +LKIDG FIR++ +N + V ++ +A+ L VAE+VE+ E Sbjct: 990 STFAYLKYLGVQILKIDGMFIRDLPNNRDNQAFVKAMIDVAKGLDKLTVAEFVEDAETLA 1049 Query: 713 AVLSLGIDYMQGYLIGKP 730 + G+D QGY + +P Sbjct: 1050 MLREFGVDMAQGYHLDRP 1067 >UniRef50_Q3J907 Diguanylate cyclase/phosphodiesterase n=2 Tax=Nitrosococcus oceani RepID=Q3J907_NITOC Length = 1201 Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 115/427 (26%), Positives = 205/427 (48%), Gaps = 34/427 (7%) Query: 330 AYVDPVVHLPNVRAL----NRALRDAPWSA----LCYLRIPGMEMLVKNYGIMLRIQYKQ 381 A DP+ L N + NRAL A A L YL + +++ G + Sbjct: 778 ATHDPLTGLVNRKEFEQQANRALAKADHEAQSYVLLYLDLDQFKIINSTCGYEAGDALLK 837 Query: 382 KLSHWLSPLLEPGEDVYQLSGNDLALRLNTESH--------QERITALDSHLKQFRFFWD 433 +++ L+ L G + +L N + LN SH Q+RI A+D+H R W+ Sbjct: 838 EIASLLTEFLPDGGILARLGDNQFGVLLNQCSHDEGCEIAEQQRI-AIDNH----RLVWN 892 Query: 434 GMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQR-RGAMYLQRELKD 492 + + V +LL AE + + R + + E + Sbjct: 893 NKRLSVGASIGLVSVSEQKCDAAVLL----QRAEAACMEAKEAGRNRIQACEFDDEEFRR 948 Query: 493 KVAMMN---RLQQALEHNHFFLMAQPITGMRG----DVYHEILLRMKGENDELISPDSFL 545 + M+ R+ + LE L Q IT + + ++EILLR++ ++ I+ F+ Sbjct: 949 RHGMIEWVARIDEVLEDGRLQLWCQRITPIADHLEMEPHYEILLRLRDQDGRWIAAGEFI 1008 Query: 546 PVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPA-HRFAINLSPTSVCQARFPVEVSQLLA 604 A + ++ID WVI+ ++MA+++ ++ AINLS S+ R + + A Sbjct: 1009 QTAEFYHRMAAIDQWVIQSAFRWMADHKERLEQLGGIAINLSGQSLNDRRLVTFIKREFA 1068 Query: 605 KYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNAD 664 + + ++ FE+TE+ + N+ + ++ +++LGC ++DDFG+G +SY+ LKN+ D Sbjct: 1069 RTGVPPQRVCFEITETAGVANLSHSAQLIEAVKDLGCHFSLDDFGSGLSSYSYLKNLPVD 1128 Query: 665 LLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQG 724 LKIDG+F+++I ++ DY +V SI + V+AE+VE++ I + +G+D+ QG Sbjct: 1129 YLKIDGAFVKDIATSPSDYAVVKSINEIGHFMGKKVIAEFVESKAILAKLQEIGVDFAQG 1188 Query: 725 YLIGKPQ 731 Y I PQ Sbjct: 1189 YGIEPPQ 1195 >UniRef50_D1B415 Diguanylate cyclase n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B415_SULD5 Length = 470 Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 120/451 (26%), Positives = 206/451 (45%), Gaps = 39/451 (8%) Query: 295 LTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPN-VRALNRA--LRDA 351 LT+ SS LV Y+ L + + R++ Y D LPN + L A L + Sbjct: 38 LTLVGSSGLV------YVTTLRYSHKKLKSRLKYNLYTDFNTKLPNRLHFLKEAKKLSQS 91 Query: 352 PWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGE-DVYQLSGNDLALRL- 409 S L + I + YG + + ++HWL L P E +Y+ + A+ + Sbjct: 92 HESTLILINIDSFQTTNTFYGHAFGDAFLKTIAHWLKNNLPPIEATLYKFEADIYAIFIP 151 Query: 410 ---NTESHQERITALDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVA 466 +T + Q+ + L H+ + R G+ + + + G N + Sbjct: 152 APFSTYNLQKYLKKLSLHITKERIICRGIEIDTTLSIGAT------------QGTKNLLK 199 Query: 467 ELSIVTNAPENMQRRGAMYLQRELKDK-----VAMMNRLQQALEHNHFFLMAQPITGMR- 520 SI +N + +Y + K+K + M + L++AL + QPI + Sbjct: 200 LASIACKEAKNKRLPYLIYDKNSHKEKEYHYNITMNHTLKEALAKDRVVPFFQPIVNLHN 259 Query: 521 GDVYH-EILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAH 579 G++ E L+R+ E E P FL +A + S + M +I+ + ++ ++ Sbjct: 260 GEIEKFETLMRIHKEEKEYYLPSDFLEIAKHSKIYSKLSMALIQKAFETF-----QISSN 314 Query: 580 RFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQEL 639 F+INLS + + + L ++ + W +IFE+ ES+ + N + ++ ++ Sbjct: 315 SFSINLSYLDMTNIVTKTFILEKLKEFNVGPW-VIFEILESDGIENYEAIATFVEEVKAY 373 Query: 640 GCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKML 699 G QIAIDDFG+GY+++ RL + D +KIDGS I+N+ N IV +I A+ + Sbjct: 374 GAQIAIDDFGSGYSNFERLNELRVDYIKIDGSLIKNLDRNDDTKVIVKNIVRFAQDLGIK 433 Query: 700 VVAEYVENEEIREAVLSLGIDYMQGYLIGKP 730 +AEYV + +I V LG+DY QGY IGKP Sbjct: 434 TIAEYVHSADILACVKELGVDYAQGYYIGKP 464 >UniRef50_D0I367 Sensory box/GGDEF family protein n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0I367_VIBHO Length = 1043 Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 86/255 (33%), Positives = 141/255 (55%), Gaps = 13/255 (5%) Query: 488 RELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDV----YHEILLRMKGENDELISPDS 543 R + +++ ++++ +AL + F + AQPI + ++ Y E+L+RM+ + + P Sbjct: 772 RRHEREMSFVSKIHEALAEDRFEVYAQPIVSVNANLEEKLYFEVLVRMRDKEGNYVPPGQ 831 Query: 544 FLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAH-----RFAINLSPTSVCQARFPVE 598 F+P A F ++ ID VIE TL + + P H +INLS S+ F Sbjct: 832 FIPAAERFNMAHMIDKRVIEKTLGWFD----RHPEHVDVVGMVSINLSGRSMSDEGFIHF 887 Query: 599 VSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARL 658 + + L I + + E+TE+ A++N+ A L++LGC IA+DDFG+G +S+ L Sbjct: 888 LLEALKTSTIPSSSISLEITETAAISNLSDAIGLFTKLKQLGCSIALDDFGSGLSSFGYL 947 Query: 659 KNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLG 718 K + D++KIDG F+R+I + DY +V +I LA VAE+VEN+ I + SLG Sbjct: 948 KRLPVDIIKIDGQFVRDIADDEADYVMVRAIHELATQMGKKTVAEFVENDAILMRLCSLG 1007 Query: 719 IDYMQGYLIGKPQPL 733 +DY QGY P+P+ Sbjct: 1008 VDYAQGYHFSVPKPM 1022 >UniRef50_A6Q1F1 Signal transduction response regulator n=2 Tax=Bacteria RepID=A6Q1F1_NITSB Length = 844 Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 117/469 (24%), Positives = 225/469 (47%), Gaps = 30/469 (6%) Query: 290 GYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYV---DPVVHLPNVRAL-- 344 G + ++ + LV +++ + + +A+ + + L Y DP+ +L N R Sbjct: 386 GVSPEIKENPTKILVVESVLSTLLNVVGSVKAIYKYTKDLEYYATRDPLTNLYNQRVFWE 445 Query: 345 ------NRALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVY 398 RA R +L + + +++ YG ++ K++ L + PG+ V Sbjct: 446 LISYEEERAKRHHYKFSLLVIDLDNFKLVNDTYGHDFGDEFLNKIADLLQDCVRPGDIVA 505 Query: 399 QLSGNDLALRLNTESHQERITALDSHLKQFRFFW----DGMPMQPQ--IGVSYCYVRSP- 451 + G++ + L Q + LK + DG + P+ IGV+ C + Sbjct: 506 RYGGDEFVIVLPETDEQGAFIVANRILKNAEKYSIHTPDGKIINPRLSIGVATCPDHADN 565 Query: 452 VNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFL 511 + ++ + + A+ + Q Q E ++++ L +A+++ Sbjct: 566 IKDLFSIADHMMYKAKSAGKAQVKLPTQEDIEELFQEE--SEISIF--LTEAVKNREIIP 621 Query: 512 MAQPITGMRGDVY--HEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFM 569 QPI ++ + +E+L R + + DEL+ +F+ VA + GL +D+ ++E + M Sbjct: 622 YFQPILNVKTEKVEAYELLARFRYK-DELLPAATFIEVAEKTGLIFKMDLILLEKAFEKM 680 Query: 570 AENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQA 629 + K+ +NLSP ++ + + ++V+QL+ Y I+ L+FE+TE + + N Sbjct: 681 QGRKEKL-----FVNLSPKALVISDYFLKVNQLVKTYGIDPKNLVFEITERDTVKNFSLL 735 Query: 630 QITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASI 689 Q + L+ G AIDDFG+G++S+ +K + D +KI+G FI+N++ + D V SI Sbjct: 736 QKFVNELKNSGFNFAIDDFGSGFSSFYYVKQLPIDYVKIEGEFIKNLLVDEKDRAFVESI 795 Query: 690 CHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLN 738 L++ + VAE++E+E I A+ L IDY QGY IGKP P + T++ Sbjct: 796 VTLSKKLGIKTVAEFIEDESILHAIQQLEIDYGQGYYIGKPSPEMGTID 844 >UniRef50_A6T0F0 Sensory box/GGDEF family protein n=2 Tax=Oxalobacteraceae RepID=A6T0F0_JANMA Length = 699 Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 122/425 (28%), Positives = 203/425 (47%), Gaps = 24/425 (5%) Query: 326 IQRLAYVDPVVHLPN--------VRALNRALRDAPWSALCYLRIPGMEMLVKNYGIMLRI 377 IQ A D + LPN +A+ + R +A+ +L + + + + G + Sbjct: 271 IQFQATHDALTGLPNRTLLYDRMQQAVLHSERYGKLTAIAFLDLDQFKFINDSLGHQVGD 330 Query: 378 QYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERIT-ALDSHLKQFRFFWDGMP 436 + + + L+ L + V + G++ L L + ++E IT + L + W Sbjct: 331 ELLKITAQRLTSCLRESDTVARQGGDEFVLLLTDQPNEEAITHTMQRVLHEVSQPWKAND 390 Query: 437 MQPQIGVSYCYVRSPVN--HIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELK--- 491 ++ QI S P + LL + S + A E + R Y E+ Sbjct: 391 LEFQITCSIGLTLCPDDGRDAETLLKNAD-----SAMYKAKE-LGRNNFQYFSAEMNSSV 444 Query: 492 -DKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVA 548 D++ ++NRL+QA+ + F L QP + + E L+R + ++SP SF+P+A Sbjct: 445 TDRLELLNRLRQAITNEDFVLHYQPKVSLASHQIIGAEALVRWNSAHSGMVSPASFIPLA 504 Query: 549 HEFGLSSSIDMWVIEHTL-QFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQ 607 E GL + WV+ Q A A P ++NLSP + + V ++L + Sbjct: 505 EETGLIIPLGEWVLRTACRQNRAWQDAGYPPIPISVNLSPRQLARGDIVEVVERILTETG 564 Query: 608 IEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLK 667 +EA L E+TES T+V+++ L L+ LG +I++DDFGTGY+S + LK D LK Sbjct: 565 LEAQHLELEITESVMTTDVEKSFALLTQLRSLGVKISLDDFGTGYSSLSYLKRFPVDTLK 624 Query: 668 IDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLI 727 ID SF+R+I ++ IV +I L R + V+AE +E E+ + +L+ G D QGYL+ Sbjct: 625 IDQSFVRDIATDQDSAAIVKAIISLGRNLNLTVLAEGIETEDQFQFLLANGCDEGQGYLM 684 Query: 728 GKPQP 732 KP P Sbjct: 685 SKPVP 689 >UniRef50_Q2B961 Putative uncharacterized protein n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2B961_9BACI Length = 974 Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 129/441 (29%), Positives = 211/441 (47%), Gaps = 42/441 (9%) Query: 317 TRQRAVVRRIQRLAYVDPVVHLPN----VRALNRALRDAPWS----ALCYLRIPGMEMLV 368 T Q+ + + + +LAY D LPN + L+ L+ A A+ ++ I +++ Sbjct: 530 TEQKRIEQEMTQLAYYDKDTGLPNRLKFMEELDDLLQKAKKKKRPLAVLFMDIDRFKLIN 589 Query: 369 KNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLKQF 428 + G Q ++++ + +L PG + SG+ L L E+ R+T L +H+ Q Sbjct: 590 DSLGHYAGDQILRQIAGRIEAILPPGSFFGRFSGDKFTLILAKEADSSRVTKLSNHILQA 649 Query: 429 ----------RFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLG-ELNTV-AELSIVTNAPE 476 FF G IG S +Y G E T+ I N + Sbjct: 650 ISSPVYYGEQEFFITG-----SIGAS----------LYPGDGHEKETLMKNADIAMNRSK 694 Query: 477 NMQRRGAMYLQRELKD----KVAMMNRLQQALEHNHFFLMAQPITGMR-GDVY-HEILLR 530 + Y E+ + K+ + + L++AL+ FFL QP+T + G +Y E L+R Sbjct: 695 HQGGNRLTYYSTEMNEQTLLKLELESYLRKALQKKEFFLCYQPLTNLETGAIYGSEALIR 754 Query: 531 MKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAE-NRAKMPAHRFAINLSPTS 589 L+SP F+P+A E GL + I WV++ + E + + + ++N+S Sbjct: 755 WNHPKLGLVSPGDFIPLAEETGLINEIGHWVLQTACRQTKEWHNKGLGSLTVSVNVSVHQ 814 Query: 590 VCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFG 649 Q F +V Q+L + +E L+ E+TES+ L N++ + + +Q LQ G ++AIDDFG Sbjct: 815 FQQPGFVHKVLQVLKETMLEPQFLVLELTESSMLRNMENSILVIQELQRNGIRVAIDDFG 874 Query: 650 TGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEE 709 TGY+S + LK++ D LKID SFI N+ S S D IV +I + + VVAE VE E Sbjct: 875 TGYSSLSYLKHLPIDALKIDRSFIDNLRSGSPDIAIVNAIITMGLGLHVKVVAEGVETAE 934 Query: 710 IREAVLSLGIDYMQGYLIGKP 730 + L + QG+ I +P Sbjct: 935 QMRLLKDLKCHFAQGFFIHRP 955 >UniRef50_C7LR02 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LR02_DESBD Length = 1158 Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 85/241 (35%), Positives = 138/241 (57%), Gaps = 4/241 (1%) Query: 494 VAMMNRLQQALEHNHFFLMAQPITGMRGDVYH--EILLRMKGENDELISPDSFLPVAHEF 551 V + N L+QAL + F L QPI + G E L+R + P F+PVA E Sbjct: 899 VQLENDLRQALVEDEFELFFQPIYALSGQKLRGFEALIRWNHPQRGHLPPGEFIPVAEET 958 Query: 552 GLSSSIDMWVIEHTLQFMAENRAKMPAH--RFAINLSPTSVCQARFPVEVSQLLAKYQIE 609 GL + I WV+ + +A +++ P ++NLSP + QA +++LL + ++ Sbjct: 959 GLVTEIGKWVMRRGCRVLAGWQSQFPGLDISLSLNLSPKDLLQASLVPVLTELLHETGLD 1018 Query: 610 AWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKID 669 A L E+TE+ + N +QA L+ LQ++G QIA+DDFGTGY+S + L+ + D+LKID Sbjct: 1019 ARHLKLEITETAVMDNPEQATSRLERLQKMGFQIAMDDFGTGYSSLSYLQRLPIDILKID 1078 Query: 670 GSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGK 729 SF++ ++ N + +I+ +I L ++ + +VAE VE + E + LG D QG+L+G+ Sbjct: 1079 RSFVQTMLENPNNLEIIKAIIGLGKILDLRIVAEGVETRQQLETLQELGCDLAQGFLLGR 1138 Query: 730 P 730 P Sbjct: 1139 P 1139 >UniRef50_D1AZY7 Diguanylate cyclase n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1AZY7_SULD5 Length = 586 Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 120/445 (26%), Positives = 207/445 (46%), Gaps = 24/445 (5%) Query: 310 NYMAVLA---TRQRAVVRRIQRLAYVDPVVHLPN--------VRALNRALRDAPWSALCY 358 +Y +L + +R I LA+ DP+ HL N +AL ++ R AL Sbjct: 134 DYFVILGKDISERRHAESTIHTLAFFDPLTHLANRQLLHDRMAQALAKSQRHHKVGALLM 193 Query: 359 LRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERI 418 + + + L G + + +++ + ++ G+ + ++SG++ + L +H+E Sbjct: 194 IDLDNFKALNDTKGHHIGDELLIQVAQRIQTIVREGDTLARISGDEFVVLLEGLAHEESK 253 Query: 419 TALDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTN----- 473 A ++ R + + +P + Y + S I L G+ + L + Sbjct: 254 AAQEAEKFATRVKY--LLNEPYELLGYEHTCSSSIGIALFNGQPKSKETLLKQADIAMYQ 311 Query: 474 APENMQRRGAMY---LQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDVYH-EILL 529 A E + R Y +Q ++ K M + L+ AL L QP + G + E LL Sbjct: 312 AKEKGRNRICFYDPLMQENIEHKTTMEHELRMALSKEELILFYQPQVNLEGKIVGVEALL 371 Query: 530 RMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAH--RFAINLSP 587 R LI P++F+P+A E GL + WV+ Q ++E + P +IN+S Sbjct: 372 RWNHPQKGLIPPNTFIPLAEETGLIIPVGSWVLHRACQQLSEWKKDFPHQPLHLSINVSA 431 Query: 588 TSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDD 647 +A F V+ +A +A + E+TES L ++ + ++ L+ LG ++DD Sbjct: 432 KQFQEASFYETVANAIALSGSDAGSIKLELTESLILDSIHETIAKIEALRLLGVGFSLDD 491 Query: 648 FGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVEN 707 FGTGY+S + LK + D LKID SF+R+I ++ D IV +I +A + V+AE VE+ Sbjct: 492 FGTGYSSLSYLKRLPLDELKIDQSFVRDIGHDNNDAMIVKTIIEMAHNFDLDVIAEGVED 551 Query: 708 EEIREAVLSLGIDYMQGYLIGKPQP 732 +E ++ G QGYL GKP P Sbjct: 552 KEQFNFLMENGCGLFQGYLFGKPMP 576 >UniRef50_A1K3A1 GGEF/EAL/PAS/PAC-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K3A1_AZOSB Length = 818 Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 124/451 (27%), Positives = 206/451 (45%), Gaps = 20/451 (4%) Query: 308 IVNYMAVLA--TRQRAVVRRIQRLAYVDPVVHLPNVRALN--------RALRDAPWSALC 357 + +Y+ V + +R + R+QRLA+ D + LPN LN R R A+ Sbjct: 367 VSHYVGVFSDISRMKETEARLQRLAHYDALTDLPNRVLLNLRLAHGVERVQRSGEMLAVL 426 Query: 358 YLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQER 417 +L I + + + G + + +++ L + + + +L G++ + L+ Sbjct: 427 FLDIDRFKNVNDSLGHPVGDELLIEIARRLRSRIRAEDTLARLGGDEFVILLDRIRSAND 486 Query: 418 ITALDSHLKQF--RFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAP 475 + + + F + +G S P++ N A L A Sbjct: 487 VADFAQEIIDLLNQSFQLASGQEVFVGASIGISLYPLDTDDATQLISNADAALYQAKEAG 546 Query: 476 ENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGM-RGDVYH-EILLRMKG 533 N+ R L R +++ + L++ LE F L QP+ + +G+V E L+R Sbjct: 547 RNVYRFYTADLTRAAHERLGLEAALRRGLERGEFVLHFQPVVALDKGEVVGAEALVRWNH 606 Query: 534 ENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHR---FAINLSPTSV 590 + +I+P F+P+A E GL + WV+E + + R + R A+NLS Sbjct: 607 PTEGMIAPLRFIPLAEETGLIVPLGEWVLESACR---QGREWLDCGRPLTIAVNLSTRQF 663 Query: 591 CQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGT 650 V +L + A L E+TES + + +A TL L+ LG +++IDDFGT Sbjct: 664 RAGDLTATVRDILDRTGFPAALLELEITESTVMEDADRAVATLAALKGLGVRLSIDDFGT 723 Query: 651 GYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEI 710 GY+S A LK D LKID SF+R+I + D IVA++ +A ++ V+AE VE E Sbjct: 724 GYSSLAYLKRFAVDALKIDRSFVRDIADDENDRMIVATVVAMAHQMRLGVIAEGVETAEQ 783 Query: 711 REAVLSLGIDYMQGYLIGKPQPLIDTLNEIE 741 + SLG + QGYL+G+PQ D L +E Sbjct: 784 LAFLRSLGCEAYQGYLVGRPQAAADFLGAVE 814 >UniRef50_D1B111 PAS sensor protein n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B111_SULD5 Length = 647 Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 86/236 (36%), Positives = 136/236 (57%), Gaps = 6/236 (2%) Query: 500 LQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSI 557 ++ A+E + QPI + +E L+R+ E ++++P +FL +A + S+ I Sbjct: 416 IKTAIERQNILSYFQPIVNNQTQQIEKYESLVRLLNEEGDVLAPHAFLDIAKKGRYSTKI 475 Query: 558 DMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEV 617 V+E++ + K+P +INLS + Q + LL +Y+ A +LIFE+ Sbjct: 476 TKIVLENSFNALE----KIPKVAISINLSMQDIEQESILETIYTLLQRYKKHAPRLIFEL 531 Query: 618 TESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIV 677 ES + +V Q + + ++ G +IAIDDFGTGY+++ RL D+LKIDGS IRNI Sbjct: 532 LESENMKDVLQIKQFIHEVKAQGVKIAIDDFGTGYSNFERLLFFEPDILKIDGSLIRNIH 591 Query: 678 SNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPL 733 +N ++ IV +I A+ +K+ VAE+VENE I + V +GIDY QGY GKP+ L Sbjct: 592 TNRVNQHIVETIMLFAKKQKLTTVAEFVENETIFKMVKDMGIDYSQGYFFGKPERL 647 >UniRef50_Q3IEZ9 Putative uncharacterized protein n=2 Tax=Pseudoalteromonas RepID=Q3IEZ9_PSEHT Length = 842 Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 88/242 (36%), Positives = 138/242 (57%), Gaps = 3/242 (1%) Query: 492 DKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAH 549 +++AMM+R Q AL++N F L QP ++ + + E LLR + +ISP F+P+A Sbjct: 577 ERLAMMSRFQHALDNNEFELYFQPKQCLKSEQIMGVEALLRWHDPDLGMISPAQFIPLAE 636 Query: 550 EFGLSSSIDMWVIEHTLQFMAE-NRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQI 608 E GL +D+WVI + + + + A R AIN+S + Q + + +L Y + Sbjct: 637 ELGLIVRLDLWVINQAGKVLTLWQKEGLVAGRLAINISACHLSQGKLANNIGTMLKHYNL 696 Query: 609 EAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKI 668 L E+TES+ +++ QA+ LQ L++LG IA+DDFGTGY++ + L + D LKI Sbjct: 697 PGSLLEIELTESSFISSFTQAKTQLQQLKKLGVHIALDDFGTGYSALSYLTKLPFDTLKI 756 Query: 669 DGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIG 728 D SFI I + QIVA++ LA ++VVAE VE + ++SLG + +QGY Sbjct: 757 DASFIAKIPDEYGNSQIVAALIALASNLNLMVVAEGVEQPAQKNYLISLGCNVIQGYYYC 816 Query: 729 KP 730 +P Sbjct: 817 RP 818 >UniRef50_Q474K3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=cellular organisms RepID=Q474K3_RALEJ Length = 968 Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 85/246 (34%), Positives = 135/246 (54%), Gaps = 6/246 (2%) Query: 497 MNRLQQALEHNHFFLMAQ---PITGMR-GDVYHEILLRMKGENDELISPDSFLPVAHEFG 552 ++R+ AL F L Q P+ G R G + E+LLRM E ++L+ P +F+P + Sbjct: 703 VSRVHAALAAGRFCLYEQEIVPLNGQRQGGKHVELLLRMVDERNQLVPPMAFVPACERYN 762 Query: 553 LSSSIDMWVIEHTLQFMAENRAKMPAH--RFAINLSPTSVCQARFPVEVSQLLAKYQIEA 610 L ID WV+E +A+ RA+ AINLS +S+ RFP + + + + Sbjct: 763 LMPMIDRWVVETAFVTLAQRRAESAEDIALCAINLSASSLADVRFPTFIREQAQRTGVAL 822 Query: 611 WQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDG 670 + FE+TE+ A++N+ QA ++ +Q LGC A+DDFG G AS+ LK++ A LKIDG Sbjct: 823 SGICFEITETAAISNLAQAAAFIEQMQALGCVFALDDFGAGMASFIYLKHLPAAYLKIDG 882 Query: 671 SFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKP 730 SF+R ++ + ++ +V I + +AE+VE E + LG+D +QG+ I P Sbjct: 883 SFVREMLEDPVNQVMVEVIQRIGHAMGKKTIAEHVETEAELARLRELGVDLVQGHHIAPP 942 Query: 731 QPLIDT 736 P + T Sbjct: 943 VPFLPT 948 >UniRef50_A9BVF0 Diguanylate cyclase/phosphodiesterase n=2 Tax=cellular organisms RepID=A9BVF0_DELAS Length = 573 Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 97/272 (35%), Positives = 143/272 (52%), Gaps = 13/272 (4%) Query: 486 LQRELKDKVAMMNRLQQALEH----NHFFLMAQPITGMR-GDVYH-EILLRMKGENDELI 539 + ++ VA LQQAL L QP R G + E L R LI Sbjct: 292 FKESMRQGVAAQFDLQQALRRAVASQQLVLFYQPKIDTRTGRIRSVEALARWNHPQFGLI 351 Query: 540 SPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEV 599 SP F+P+A FGL S I WVI+ + A+ + R +IN+S + Q R + Sbjct: 352 SPRVFIPLAERFGLISEIGDWVIDEACRQTAQWARERRFMRVSINISGYQLFQTRLAQFI 411 Query: 600 SQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLK 659 ++ +A++ I QL+FE+TES A+ + K + L +G QI+IDDFGTGY+S A L+ Sbjct: 412 AEAIARHHIRPEQLVFEITESVAMEDDKTTMAVIAELTGMGVQISIDDFGTGYSSLALLR 471 Query: 660 NVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGI 719 + AD +KID SF+R++ S +V +I LA ++ VVAE V N++ RE + +LG Sbjct: 472 QLCADEVKIDRSFVRDVALKSDARAVVDAIVRLAHALELRVVAEGVTNQQQREVLQALGC 531 Query: 720 DYMQGYLIGKP---QPLID----TLNEIEPIR 744 D +QG+ +P Q LI T + EP+R Sbjct: 532 DELQGFYFARPMDAQALIASEIWTSDGFEPVR 563 >UniRef50_C6P1Q1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1Q1_9PROT Length = 1135 Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 127/473 (26%), Positives = 222/473 (46%), Gaps = 42/473 (8%) Query: 291 YTTQLTITSSSYLVFSFIVNYMAVLA--TRQRAVVRRIQRLAYVDPVVHLPNVR------ 342 Y +L IT+ ++NY+A L+ T +A I+ LA+ DP+ LPN R Sbjct: 660 YPERLAITAVKD-ARGVVINYVASLSDITLHKAAEDEIRSLAFFDPLTGLPNRRLLMDRL 718 Query: 343 --ALNRALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQL 400 AL + R AL +L + + L G + Q+++ L + G+ V ++ Sbjct: 719 QQALVASSRSGKAGALLFLDLDNFKNLNDTLGHDIGDLLLQQVAQRLKNCVREGDTVARI 778 Query: 401 SGNDLALRLNTESHQ-------------ERITALDS--HLKQFRFFWDGMPMQPQIGVSY 445 G++ + L S + + I+ L+ HL++F + P IG + Sbjct: 779 GGDEFVVMLEDLSAESIEAASQTEAVGWKIISTLNKPYHLEKFE-----VHSTPSIGATL 833 Query: 446 CYVRSPVNHIYLLLGELNTVAELSI--VTNAPENMQRRGAMYLQRELKDKVAMMNRLQQA 503 R + + +L A++++ A N R +Q L + A+ L+++ Sbjct: 834 FDSRPQI------IDDLFKQADIAMYQAKKAGRNTMRFFDPQMQDTLNTRTALEADLRKS 887 Query: 504 LEHNHFFLMAQ-PITGMRGDVYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVI 562 +E F L Q + M V E L+R ++SP F+P+A E L +I +WV+ Sbjct: 888 IERREFNLFYQIQVDEMNRPVGAEALIRWIHPKRGMVSPAEFIPLAEETDLILNIGLWVL 947 Query: 563 EHTLQFMA--ENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTES 620 + + +N A+N+S Q+ F +V + KY I+ +L E+TES Sbjct: 948 QEACAQLKTWQNNPLTRNLVLAVNVSAKQFRQSDFATQVRVFVEKYAIDPSKLKLELTES 1007 Query: 621 NALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNS 680 N++ + + L+E+G Q ++DDFGTGY+S +K + + LKID SF+ ++ + Sbjct: 1008 MLQENIEDTILIMNALKEIGVQFSLDDFGTGYSSLQYIKKLPLNQLKIDQSFVHDLDFDR 1067 Query: 681 LDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPL 733 D IV +I +A+ ++ V+AE VE +E R+ +L+ G + QGYL KP P+ Sbjct: 1068 DDKAIVRAIIAMAKSLQLDVIAEGVETQEQRQLLLNKGCTHFQGYLFSKPLPI 1120 >UniRef50_A6GRS4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Limnobacter sp. MED105 RepID=A6GRS4_9BURK Length = 943 Score = 146 bits (368), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 114/398 (28%), Positives = 199/398 (50%), Gaps = 21/398 (5%) Query: 344 LNRALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGN 403 LNR R A ++ C + I L+ YG+ + Q Q L + ++ +L + Sbjct: 518 LNR--RTASFTFFC-VEIQQFSRLISAYGLAVSDQLLQAFHTELYRHMSTHGEISRLHID 574 Query: 404 DLALRL---NTESHQERITALDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLG 460 A+ + +TE +E A L F +DG +Q + + + + V+++ L Sbjct: 575 QFAIMIHPNDTERAEEAFNAFLHRLDSVPFQFDGRCIQTTVLATLVF-QGLVDNV---LD 630 Query: 461 ELNTVAELSIVTN---APENMQRRGAMYLQ---RELKDKVAMMNRLQQALEHNHFFLMAQ 514 + TV E+S+ + A N + ++ Q R L D+ + RL L Q Sbjct: 631 VMETV-EMSMRESKLKAKRNSKVERVVFEQNQTRSLLDQSRTIRRLDDQKLPTGLTLAWQ 689 Query: 515 PITGMR---GDVYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAE 571 PI + G +Y E LLR+K EN +L S + G ++ +D WV+ HTL F+A+ Sbjct: 690 PILALNECNGPLYAEALLRIKDENGKLGSAGFLIEACERGGHTAFLDNWVLSHTLDFLAK 749 Query: 572 NRAKMPA-HRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQ 630 + ++ +IN+SP S+ F + L+ +Q A +L E+TE ++ N++ Q Sbjct: 750 HAQQLDKLSVLSINVSPGSLNDEIFLQDTLALIRAHQQHASKLCLEITEVGSVINLQAVQ 809 Query: 631 ITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASIC 690 ++ ++ LG +IA+DDFG GY+++ +++AD++KIDGS ++NI ++ + +V +I Sbjct: 810 NFIEQVRGLGVRIALDDFGAGYSNFRYAMDLHADVIKIDGSIVKNICHSTESHAVVTAIV 869 Query: 691 HLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIG 728 LA VAE+VE+ V LG+DY+QGYL+ Sbjct: 870 GLAHDLGCKCVAEWVEDLHTLREVKELGVDYVQGYLVS 907 >UniRef50_Q3A6T5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A6T5_PELCD Length = 717 Score = 146 bits (368), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 123/439 (28%), Positives = 206/439 (46%), Gaps = 40/439 (9%) Query: 318 RQRAVVRRIQRLAYVDPVVHLPNV--------RALNRALRDAPWSALCYLRIPGMEMLVK 369 R A R IQ+LAY DP+ LPN ++L ALR A+ ++ + + + Sbjct: 245 RHTAQDRHIQQLAYYDPLTELPNRVLLQERLDQSLAEALRSHHPLAVLFVDLDRFKQVND 304 Query: 370 NYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITAL-----DSH 424 + G + Q + + L L + V +L G++ + L+ H + + D+ Sbjct: 305 SLGHAIGDQLLKMVGQRLQQCLRSNDTVARLGGDEFIIVLSGFRHPSSLPKILDKIFDAL 364 Query: 425 LKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENM----QR 480 K +R + + IGV+ C + T A+L ++ NA M + Sbjct: 365 SKPYRIEMHRIVVTASIGVAVC-------------PDDGTAADL-LMRNADIAMYVAKEE 410 Query: 481 RGAMY------LQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMK 532 RG Y + + LKD++A+ L+QA+++ FFL+ QP + + V E LR K Sbjct: 411 RGNSYQLFCQEMNQALKDQLALETNLRQAVDNGEFFLLFQPRFHLASEKVVSIECFLRWK 470 Query: 533 GENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAE-NRAKMPAHRFAINLSPTSVC 591 + ++SP +FLP E GL +S+ ++ F A +A MP AINLS + Sbjct: 471 RSDGNILSPKAFLPRLEEMGLMASLGNRILRKACAFGASLQQAGMPHIPVAINLSCSQFR 530 Query: 592 QARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTG 651 Q ++ +L + + A L E+ E N ++A+ L+ ++ LG ++D+FG G Sbjct: 531 QRNLHESIATILQETGLPANCLELEINECTLQKNEERAEEILRSIKRLGVSWSLDNFGLG 590 Query: 652 YASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIR 711 Y S RLK + D LKID FIRN+ D +V +I +AR ++ +AE +E Sbjct: 591 YTSLQRLKTLPFDNLKIDRHFIRNLPETQTDAAMVGAILAMARNLGLVTIAEGIETFAQH 650 Query: 712 EAVLSLGIDYMQGYLIGKP 730 +L++G Y QG+L +P Sbjct: 651 HLLLAMGCHYGQGFLFREP 669 >UniRef50_Q5P4W8 Putative uncharacterized protein n=2 Tax=Proteobacteria RepID=Q5P4W8_AZOSE Length = 1039 Score = 145 bits (367), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 127/461 (27%), Positives = 212/461 (45%), Gaps = 26/461 (5%) Query: 288 YPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNV------ 341 YP + T + + + ++ + + +Q+ V + R A DP+ L N Sbjct: 561 YPQWVTITAVRDTDGRIAEYVTLFSDITERKQQEVA--MWRQANFDPLTGLANRSLLQDR 618 Query: 342 --RALNRALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQ 399 RAL A R L +L + G + + + G + + ++ L+ + + V + Sbjct: 619 LDRALAHARRHGCKVGLLFLDLDGFKWINDSLGHDVGDELLVDVARRLNSCVRDEDTVAR 678 Query: 400 LSGN-------DLALRLNTESHQERITALDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPV 452 L G+ DLA R + + +++ A+ L++ F G V Sbjct: 679 LGGDEFTVVVHDLADRADLGAIADKLVAV---LREP-FALRGARHHISGSVGITVFPDDG 734 Query: 453 NHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLM 512 + + LL N + A +N + A ++Q + +V + L+ A+E F L Sbjct: 735 DDVQTLL--RNADIAMYKAKQAGKNRAQPYAPHMQADALARVHLEADLRMAVEQRAFELH 792 Query: 513 AQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMA 570 QPI V E L+R K +ISP F+PVA E GL I WV+ ++ Sbjct: 793 YQPIVDCASGALVGAEALIRWKHPERGMISPLEFIPVAEECGLIVPIGEWVLREVVRQRR 852 Query: 571 ENRAK-MPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQA 629 + A+ P R +N+S +A P V LLA++ L+FE+TES + + Sbjct: 853 DWLARGHPPLRLTLNVSGVQFREAGLPELVRTLLAEFGTARSSLVFEITESVLMGGSENV 912 Query: 630 QITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASI 689 + + ++E G A+DDFGTG++S + LK D++KID SF+R+ + D +V +I Sbjct: 913 EARMCDIKEQGICFALDDFGTGFSSLSYLKRFPVDIVKIDRSFVRDCPDDRNDATLVEAI 972 Query: 690 CHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKP 730 ++A + V AE VE+ E RE + +LG DY+QGYLIGKP Sbjct: 973 INMAHSLGLRVTAEGVESAEQREFLRALGCDYLQGYLIGKP 1013 >UniRef50_B1HWB0 Signaling protein n=2 Tax=Bacillaceae RepID=B1HWB0_LYSSC Length = 701 Score = 145 bits (366), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 86/249 (34%), Positives = 137/249 (55%), Gaps = 4/249 (1%) Query: 485 YLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDVYH--EILLRMKGENDELISPD 542 Y+ + + D++ + L AL +N F+L QP ++ E L+R + + +SP+ Sbjct: 422 YMSKGIADRILLEQDLHNALANNEFYLDYQPQVNLKSGAIESVEALVRWRHPSRGFVSPE 481 Query: 543 SFLPVAHEFGLSSSIDMWVIEHTLQFMAE-NRAKMPAHRFAINLSPTSVCQARFPVEVSQ 601 F+P+A E GL + W++E Q + +P + A+NLS + Q V+ Sbjct: 482 LFIPIAEECGLIIPLGKWILETACQQAKQWEEQGLPPIKVAVNLSLGQLFQQDLVEMVAG 541 Query: 602 LLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNV 661 +L + +++A L E+TES + N+ Q L L+ LG QIA+DDFGTGY+S + LK+ Sbjct: 542 ILQRSKLDAHYLQLEITESMTM-NIDQMTQLLHELKALGIQIAVDDFGTGYSSLSYLKDF 600 Query: 662 NADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDY 721 D LKID +FIRN+ N D +V+ I +A+ ++ VVAE +E E ++ G DY Sbjct: 601 PIDCLKIDRTFIRNVPHNPNDEALVSMIISMAKHLRLKVVAEGIEEVEQLSFLMEGGCDY 660 Query: 722 MQGYLIGKP 730 +QGYL KP Sbjct: 661 IQGYLFSKP 669 >UniRef50_B4B5G1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B5G1_9CHRO Length = 997 Score = 145 bits (366), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 121/436 (27%), Positives = 206/436 (47%), Gaps = 39/436 (8%) Query: 325 RIQRLAYVDPVVHLPNVR--------ALNRALRDAPWSALCYLRIPGMEMLVKNYGIMLR 376 +I+ LAY DP+ L N R AL+ A + A+ ++ + + L G Sbjct: 569 KIKHLAYYDPLTSLANRRLFLEHLESALSVARSKGEYGAILFIDLDQFKTLNDARGHDAG 628 Query: 377 IQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLKQ--------- 427 +++ L + + V +L G++ + L + H E TA +HL + Sbjct: 629 DHLLIEVAKRLKQSVRKSDTVARLGGDEFVVLL-PQLHHEPTTA--AHLSREVAEKVRQK 685 Query: 428 ----FRFFWDGMPMQPQIGVS-YCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRG 482 F F + + IG++ + V+ LL E +T + R G Sbjct: 686 LSTPFVFQHEEFIISASIGITIFPKANETVSD---LLKEADTA------MYQVKEKGRNG 736 Query: 483 AMYLQR----ELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD-VYHEILLRMKGENDE 537 + +++ + + L++ALE F L QP + V E+LLR + + Sbjct: 737 VCFFDTTMLVQVESRFTLEKELRRALERQEFRLYLQPQVDINERIVGAEVLLRWQHPSLG 796 Query: 538 LISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPV 597 L+ P +F+P+A + GL SI WV++ F+A+ +AK P ++N+SP + QA F Sbjct: 797 LVPPCAFIPLAEDTGLIISIGEWVLQQACFFLADFQAKNPDFHLSVNISPRQLSQAEFVS 856 Query: 598 EVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYAR 657 + Q++ ++A L E+TE + +V + LQ+LG +++DDFGTGY+S A Sbjct: 857 NLKQIINITAVQANSLTLEITERLIIQDVDYVSSVMSKLQDLGINLSLDDFGTGYSSLAY 916 Query: 658 LKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSL 717 LK + + +KID +F+++I + S ++ +I +AR + VVAE VE E + Sbjct: 917 LKRLPLNEIKIDKNFVQDIGNYSNHAPLIEAILAVARHFNLTVVAEGVETIEQANFLKKR 976 Query: 718 GIDYMQGYLIGKPQPL 733 G + QGYL GKPQPL Sbjct: 977 GCHFYQGYLYGKPQPL 992 >UniRef50_A9GW14 Sensory box/GGDEF family protein n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GW14_SORC5 Length = 705 Score = 145 bits (365), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 126/441 (28%), Positives = 205/441 (46%), Gaps = 39/441 (8%) Query: 318 RQRAVVRRIQRLAYVDPVVH-LPNVRALNRALRDAPWSALCYLRIPGMEMLVKNYGIMLR 376 R A+ R + R A +D + L + RA N P+ ALCY+ + ++ G Sbjct: 258 RYDALTRLLDRYAIIDRIEEALNDCRANN-----TPY-ALCYIDLDRFRLVNATCGHEAG 311 Query: 377 IQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRL--NTESHQERIT-ALDSHLKQFRFFWD 433 Q ++ + ++ P + ++ G++ L L E ERI L L +FRF W Sbjct: 312 DDLLQWVATRVHEIVGPKDAAGRIGGDEFVLLLADKNEREAERIARDLQICLLEFRFGWA 371 Query: 434 GMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYL--QRELK 491 + + +LG + + A EN + R +YL Q+ Sbjct: 372 EKTFSIGASIGLVVLTPHFERAVDVLGAADHACRI-----AKENGRGRLQVYLDDQQMTT 426 Query: 492 DKVAM--MNRLQQALEHNHFFLMAQPITGM---------RGDVYHEILLRMKGENDELIS 540 + +M + LQ+ L L +Q I + RG + E+L+R GE+ S Sbjct: 427 SRRSMQWVASLQRHLAEGRLRLYSQGIHPLIKPGAAHTPRG-AHFEVLVRQLGEDGRFYS 485 Query: 541 PDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRF------AINLSPTSVCQAR 594 P + A + GL ID +V + + +P H +INLS S+ + Sbjct: 486 PVGIIQAAEQSGLIHVIDRYVARQAFRLIG----ALPQHALRRLDTCSINLSGVSLLREG 541 Query: 595 FPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYAS 654 + + L + Q+ ++ FE+TE+ AL N+ + +Q L +GC+ AIDDFG+G+AS Sbjct: 542 LLDFLVEQLHRAQVPPSKICFEITETAALANLGEVLWFMQELGAMGCRFAIDDFGSGHAS 601 Query: 655 YARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAV 714 Y L+++ D +KIDG F+R++ NSL IV S+ + + VAE VEN+EI + + Sbjct: 602 YGYLESLPVDYVKIDGMFVRDLKDNSLHRAIVESVHRIGDTLGIKTVAEQVENQEIADLL 661 Query: 715 LSLGIDYMQGYLIGKPQPLID 735 S+GI Y QG+ KPQPL+D Sbjct: 662 TSMGIHYAQGWHFDKPQPLVD 682 >UniRef50_D2LS52 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LS52_BACS4 Length = 607 Score = 145 bits (365), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 122/438 (27%), Positives = 202/438 (46%), Gaps = 33/438 (7%) Query: 317 TRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRDA---------PWSALCYLRIPGMEML 367 TR + + I+ L VD + LPN R +R P+ A+ + + + Sbjct: 162 TRLKQAEKVIKELGAVDTLTGLPNRDKFERDVRSRIEMKHAEKFPF-AILFFDLDRFKFY 220 Query: 368 VKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHL-- 425 G + Q +S LS + +Y+ G++ ++ ++ +E + L + Sbjct: 221 NDTLGHFTGDKLIQSISQTLSSIQHKKVQIYRYGGDEFSVLFHSPKSKEEVQELAQEILL 280 Query: 426 ---KQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRG 482 F + + + IG+SY PV I + ++ AE+++ + + + + Sbjct: 281 AFESPFHVKGNELYITASIGISYF----PV--IGVTYDQIIQQAEMAM--HYAKELGKGD 332 Query: 483 AMYLQRELK----DKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGEND 536 + Q ++ +K+ M RL+ A+E +F L P ++ + + E LLR E Sbjct: 333 FQWYQSSIRTEHDEKLLMEKRLRIAMEQENFELYYHPQIDLKENKVIGVEALLRWNDEQL 392 Query: 537 ELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAH--RFAINLSPTSVCQAR 594 +SP F+P+A E GL + I WV+E + + H R IN+SP + Sbjct: 393 GKVSPYKFIPIAEETGLINQIGDWVLEKAC--IQAKKWNNEGHELRIGINISPQQFQRPD 450 Query: 595 FPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYAS 654 F +V L K + L E+TE++ L N + TL L++ G I+IDDFGTGY+S Sbjct: 451 FVSKVKNTLDKTGLSPKLLDLEITENDLLYNRDECLKTLYRLKQFGVSISIDDFGTGYSS 510 Query: 655 YARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAV 714 + L+ D LKID SFI+ +V N+ D IV SI LA K+ V+AE VE E+ + Sbjct: 511 LSYLRRFPIDTLKIDQSFIKEVVDNTNDQAIVTSIIQLAHNMKLRVIAEGVETSEMVAFL 570 Query: 715 LSLGIDYMQGYLIGKPQP 732 L D MQG+L +P P Sbjct: 571 NKLSCDEMQGFLYSQPLP 588 >UniRef50_A3IWQ8 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) (Fragment) n=2 Tax=Cyanothece RepID=A3IWQ8_9CHRO Length = 822 Score = 145 bits (365), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 107/384 (27%), Positives = 185/384 (48%), Gaps = 34/384 (8%) Query: 330 AYVDPVVHLPNVRALNRALRDAPWS--------ALCYLRIPGMEMLVKNYGIMLRIQYKQ 381 A D + L N R L + L A S LCYL + +++ G + + + Sbjct: 442 ASHDNLTGLANRRELEKQLSLAIESYKNEDVEHILCYLDLDQFKIINDTCGHVAGDELLK 501 Query: 382 KLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERIT---ALDSHLKQFRFFWDGMPMQ 438 ++++ L + + + +L G++ AL L S + T L +K FRF WD Sbjct: 502 QVTNLLQTRVRSSDILARLGGDEFALLLKGCSLGKAKTIANNLRQLVKNFRFTWDNEIFS 561 Query: 439 PQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAM-- 496 + + + + I ++ ++ + + R +Y+ +E D+ Sbjct: 562 VGVSIGIVSINQEIQTITSVINAADSACYTA-------KSRGRNCVYVYKESDDEATKKI 614 Query: 497 -----MNRLQQALEHNHFFLMAQPITGMRG--DVYHEILLRMKGENDELISPDSFLPVAH 549 + RL QAL+ N F L +Q I ++ V+HE+LLR+ ++ L+SP +F P A Sbjct: 615 GQNQWIIRLNQALDENLFHLYSQKIVSIQSTEKVHHEVLLRLLDDSGNLVSPLAFFPSAE 674 Query: 550 EFGLSSSIDMWVIEHTLQFMAENRAKMPA-------HRFAINLSPTSVCQARFPVEVSQL 602 + L ID WVI + L+ +E K H INLS SV + + + Sbjct: 675 RYNLMEEIDQWVISNFLKVYSEAYQKQSNLKKANFNHVHTINLSAISVKNDQLCNFIEEK 734 Query: 603 LAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVN 662 L+ Y + L FE+TE+ A+TN+ Q ++ +++LGC AIDDFG+G +S + LKN+ Sbjct: 735 LSYYNVNPKHLCFEITETTAITNLSQTIKLIEGIKQLGCYFAIDDFGSGMSSLSYLKNLP 794 Query: 663 ADLLKIDGSFIRNIVSNSLDYQIV 686 D LKIDG+F++++ +SL++ +V Sbjct: 795 VDYLKIDGNFVKHLADDSLNHCLV 818 >UniRef50_Q2P5I3 Putative uncharacterized protein XOO1439 n=9 Tax=Xanthomonas RepID=Q2P5I3_XANOM Length = 798 Score = 145 bits (365), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 105/395 (26%), Positives = 190/395 (48%), Gaps = 16/395 (4%) Query: 355 ALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRL-NTES 413 ALC++ + +++ +G + ++ + ++ L PG+ + +L G++ A+ L NT+ Sbjct: 400 ALCFVDMDYFKLVNDTFGHAVGDKFLCHFADVITMQLRPGDWLGRLGGDEFAILLANTDL 459 Query: 414 HQER--ITALDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIV 471 Q R + + + L Q G P+ P +R + + L+ T A+L+ Sbjct: 460 PQARALLEGMHAVLGQPWSHQGGRPLTPSCSFGVVEIRQSASDVNSLM----TAADLACH 515 Query: 472 TNAPENMQR-----RGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMR--GDVY 524 E R + L + D ++ +Q A+ L AQ I + G + Sbjct: 516 AAKEEGRNRIRCFNETDVALAQRRHDG-GWISAVQLAIAEERLLLYAQKIQVLSDPGRLQ 574 Query: 525 HEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFA-I 583 +E+L+RM+ + ++SP FLP +GL +D +V+E ++ N + + Sbjct: 575 YEVLVRMRASDGRVLSPGEFLPAVERYGLGRMVDTYVLESLCAQLSANPMHLAILDLCHV 634 Query: 584 NLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQI 643 NLS S+ Q F V L +Y +L E+TE+ + +++ AQ +Q ++ GC + Sbjct: 635 NLSAQSIAQPDFLDFVCALFERYPALVPKLCMEITETAVIGDLEHAQRFVQSVRARGCHV 694 Query: 644 AIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAE 703 A+DDFG+G AS+ LK D+LKID F+RN +++D V SI + + VVAE Sbjct: 695 ALDDFGSGMASFGYLKQFTVDVLKIDCGFVRNYAHDAVDRAAVHSIAQVGLALGIEVVAE 754 Query: 704 YVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLN 738 VE+E + G+ +QG+ + +P PL + L+ Sbjct: 755 GVESEADIPGLRDAGVGQVQGFSLHRPCPLEELLH 789 >UniRef50_B1M823 Diguanylate cyclase/phosphodiesterase n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1M823_METRJ Length = 785 Score = 145 bits (365), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 114/434 (26%), Positives = 204/434 (47%), Gaps = 27/434 (6%) Query: 317 TRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRD--APWSA--LCYLRIPGMEMLVKNYG 372 T++R RRI LA+ DP+ L N RAL+ L P L + + + + YG Sbjct: 357 TKEREAQRRIAELAFCDPLTKLANRRALSARLEHDFTPKRVVKLLLIDLDRFKQVNDTYG 416 Query: 373 IMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERI--TALDSHLKQFRF 430 ++ Q ++++ L + P V +L G+++A+ + + Q TA+ L + Sbjct: 417 HVVGDQLLIQVANRLRTIAGPDGFVARLGGDEMAVLVYGDQTQAMAVATAVIEALA-LPY 475 Query: 431 FWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMY----- 485 D + + + C + I L+ + S + Q RG Sbjct: 476 GIDDLTVSIGCSIGLCCTDDAQDAIELM--------QFSDIALYESKRQGRGRTSCYTPD 527 Query: 486 LQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDS 543 + R + D+V + ++ A+E +L QP+ + D + +E L+R +SP Sbjct: 528 MLRTVADRVQLETDMRAAIERGEMYLAFQPVIALVDDRIIGYEALIRWDHPKLGAVSPAR 587 Query: 544 FLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRF-AINLSPTSVCQARFPVEVSQL 602 F+P+A E G I WV LQ A++P + A+N+SP + +++Q Sbjct: 588 FIPLAEETGQIIPIGAWV----LQEACRQAARLPNDVYVAVNVSPVQFRSPQLLSDLTQA 643 Query: 603 LAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVN 662 LA+ + A +L E+TE+ + + + L ++ LG +A+DDFGTGY+S A L++ Sbjct: 644 LARSGLPAERLEIELTETAIVEDGPRIAKILAAIRRLGVTVAMDDFGTGYSSLAHLRDFP 703 Query: 663 ADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYM 722 D +K+D SF+ ++ ++ I H+A+ +++ AE VE + +G D + Sbjct: 704 LDRIKVDRSFVATAETDRHSLAVLKGIMHIAKALDVVLQAEGVETPSQLALMREIGCDAI 763 Query: 723 QGYLIGKPQPLIDT 736 QGYLIG+PQ L+D+ Sbjct: 764 QGYLIGRPQRLVDS 777 >UniRef50_A1KAZ1 Hypothetical signaling protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KAZ1_AZOSB Length = 952 Score = 145 bits (365), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 97/278 (34%), Positives = 149/278 (53%), Gaps = 13/278 (4%) Query: 468 LSIVTNAPENMQRRGAM----------YLQRELKDKVAMMNRLQQALEHNHFFLMAQPIT 517 +++V NA M R A L R +++A+ RL++ALEH+ F + QP+ Sbjct: 663 MTLVRNADAAMYRAKAQGRNTYGFYTEDLIRSATERLALETRLRRALEHDEFVVYYQPVL 722 Query: 518 GMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAE-NRA 574 G++ + E L+R K + + ++SP +F+PVA E GL ++ WV+ + + E A Sbjct: 723 GVKDGRLLGAEALVRWKPQGEPMVSPAAFIPVAEETGLIVALGEWVLRDACRQVREWIDA 782 Query: 575 KMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQ 634 + A+NLS + ++ +LA+ + A QL E+TES+ L + A L+ Sbjct: 783 GYAFGQVAVNLSAEQFRRQDVSAMLATVLAETGLPATQLELEITESSLLEAGEHAVGLLE 842 Query: 635 HLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLAR 694 L++ G +AIDDFGTGY+S A LK + D LKID SF+++I +S D I ++I +AR Sbjct: 843 RLKQQGVGLAIDDFGTGYSSLAYLKRFSIDKLKIDRSFVQDIADDSNDLAIASAIVAMAR 902 Query: 695 MKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQP 732 M V AE VE E E + LG QGYL P P Sbjct: 903 ALDMAVQAEGVEGEAQLELLRGLGCGSYQGYLCSPPLP 940 >UniRef50_UPI0001C31379 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31379 Length = 587 Score = 145 bits (365), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 79/247 (31%), Positives = 129/247 (52%), Gaps = 2/247 (0%) Query: 498 NRLQQALEHNHFFLMAQPITGMRGDVY--HEILLRMKGENDELISPDSFLPVAHEFGLSS 555 +R+ AL H+ F L+AQP+ V HE+LLR+ G + +LI P +FL +A GL Sbjct: 338 DRIVDALAHDRFALVAQPVVDATSGVVVQHELLLRLTGSHGDLIPPAAFLSIAERDGLIV 397 Query: 556 SIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIF 615 +ID WV + +AE A +N+S S+ ++ L + ++ L+F Sbjct: 398 AIDSWVARRAIGLLAELERSGTATPLEVNVSGRSLADTDLLAAIAGELRRTGVDPRNLVF 457 Query: 616 EVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRN 675 E+ E+ A+ +++ A+ Q ++ LGC+ AIDDFG G S LK++ D+LK+DG + Sbjct: 458 EIPETAAVADIQLARAFAQQVRALGCRFAIDDFGAGLGSLYYLKHLPFDMLKLDGELVEQ 517 Query: 676 IVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLID 735 D ++ S ++A + +AE V + E + LG+D +QG+ I PQPL Sbjct: 518 CSRTVADRLVIESAVNVAHGLGAVAIAEQVGDAETHALLTGLGVDLIQGHHIAMPQPLAV 577 Query: 736 TLNEIEP 742 E+ P Sbjct: 578 AFGELSP 584 >UniRef50_C6MD86 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MD86_9PROT Length = 1029 Score = 144 bits (364), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 81/246 (32%), Positives = 145/246 (58%), Gaps = 7/246 (2%) Query: 493 KVAMMNRLQQALEHNHFFLMAQPI--TGMRGDVYHEILLRMKG--ENDELISPDSFLPVA 548 ++ +R+ QALEH+ F L Q + T + + E L+RM+ + LI P F+P+A Sbjct: 785 RMTWRSRIAQALEHDLFELHFQGVYLTSDKMLSHIEALIRMRDLERSGHLIMPGQFIPIA 844 Query: 549 HEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQI 608 + G ID WV++ ++ +A N MP AIN+S + + P+ + +LL + + Sbjct: 845 EKSGQILDIDRWVVKECIEKLA-NDLNMPP--LAINISGRTFDEPSLPLYIRKLLLERGV 901 Query: 609 EAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKI 668 E +LI E+TE+ A+++++ AQ ++ + + GC++ +DDFG+G++++ LK + ++LKI Sbjct: 902 EPGRLIIELTETAAVSDIQDAQRFIESIHQSGCKVCLDDFGSGFSTFGYLKYLGVEILKI 961 Query: 669 DGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIG 728 DG FI ++ +N + V ++ +A + VAEYVE+E+ V LGID +QGY G Sbjct: 962 DGLFISDLHNNRDNQVFVKAMVDVAHGLGKITVAEYVEDEDTFRMVKKLGIDLVQGYNFG 1021 Query: 729 KPQPLI 734 +P ++ Sbjct: 1022 RPSKIL 1027 >UniRef50_B6BNW2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BNW2_9PROT Length = 779 Score = 144 bits (364), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 81/254 (31%), Positives = 145/254 (57%), Gaps = 8/254 (3%) Query: 483 AMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPI-TGMRGDV-YHEILLRMKGENDELIS 540 AM L +E ++ + ++++A++++ L QPI G++ +E L+R+ +D++I+ Sbjct: 531 AMNLDKEYENNMLWTKKIKEAIKNDKIVLFFQPIVDNATGEINKYESLIRLIDSDDKVIT 590 Query: 541 PDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVS 600 P FL +A + L + VI+ + + EN F++N+S + + Sbjct: 591 PYFFLEIAKKAKLYKQLTKIVIQKSFENFREN-----DFEFSVNISIDDILDKEINAYIL 645 Query: 601 QLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKN 660 ++L Y I + ++IFE+ ES ++ N + Q ++ ++ELGC++AIDDFGTGY+++ L Sbjct: 646 EMLNIYNI-SHRVIFEIVESESIENFDEIQRFIKSVKELGCRVAIDDFGTGYSNFEYLMR 704 Query: 661 VNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGID 720 + AD +KIDGS I+ I+ N I I A+ + V+AE+VE+EEI + V LGI+ Sbjct: 705 LEADFIKIDGSIIKEILDNKNSEIITTVIVDFAKKMGIQVIAEFVESEEIFQKVKELGIE 764 Query: 721 YMQGYLIGKPQPLI 734 QGY +P+P + Sbjct: 765 KSQGYYFSEPKPFL 778 >UniRef50_B4U7Y9 Diguanylate cyclase/phosphodiesterase n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U7Y9_HYDS0 Length = 846 Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 74/209 (35%), Positives = 125/209 (59%), Gaps = 4/209 (1%) Query: 525 HEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAH-RFAI 583 +E+L+R++ +N E++S F+ +A GL +D +IE + + + K+P + + Sbjct: 638 YEVLMRIE-DNGEILSAYKFIEIAETLGLVYKLDYILIEKAIDTIV--KHKLPDNIKIFF 694 Query: 584 NLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQI 643 NLSP S+ F +V +L +Y + +++FE+TE + + N++ + +Q L+ G Sbjct: 695 NLSPKSLIIGDFIDKVKSILTQYSFPSTRIVFEITERDTIKNIEIIKKFVQALKLEGFSF 754 Query: 644 AIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAE 703 AIDDFG G+ASYA +K+ D +KIDG +R + SN +D + S L + M +AE Sbjct: 755 AIDDFGAGFASYAYIKHFPIDFVKIDGEIVRTMTSNKIDEAFIKSTVTLTKALNMKTIAE 814 Query: 704 YVENEEIREAVLSLGIDYMQGYLIGKPQP 732 +VENEE +A++S GID++QGY +GKP Sbjct: 815 FVENEETLQALISAGIDFVQGYYVGKPSK 843 >UniRef50_C7RNJ0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RNJ0_9PROT Length = 957 Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 81/251 (32%), Positives = 139/251 (55%), Gaps = 2/251 (0%) Query: 486 LQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDS 543 +Q +++ ++ + ++L + QPI +R ++E L+RM+ + +I P Sbjct: 706 VQEKMQSRLHWEEMINRSLLDEGLLVYYQPILDIRARQVSHYEALVRMRSADGSIIPPGL 765 Query: 544 FLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLL 603 F+ VA + GL ID VI M A +++F+INLS S+ AR + L Sbjct: 766 FMEVAEDSGLIREIDRRVIHQVFGKMLALFAIGRSYKFSINLSGVSINDARLLSFIRDEL 825 Query: 604 AKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNA 663 ++ + ++FE+TE+ A+++ A+ + ++ELGC ++DDFG G++S+ +K + Sbjct: 826 SRSPLLPSHVVFEITETAAVSDFSAARTFMNAVRELGCAFSLDDFGVGFSSFNYVKQLPV 885 Query: 664 DLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQ 723 D +KIDGSF+R +V + D V ++ +AR VAE+VE+E + + S G+DY Q Sbjct: 886 DYVKIDGSFVRTLVDSPDDQVFVRALAEVARGFGKKTVAEFVEDERALKMLRSFGVDYAQ 945 Query: 724 GYLIGKPQPLI 734 GY IGKP P I Sbjct: 946 GYFIGKPAPDI 956 >UniRef50_C5BTG9 PAS/GGDEF/EAL domain protein n=2 Tax=Gammaproteobacteria RepID=C5BTG9_TERTT Length = 836 Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 81/253 (32%), Positives = 138/253 (54%), Gaps = 5/253 (1%) Query: 489 ELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLP 546 EL+ ++ R+++A+ + L QP+ VY+E L+RM+ E L+ P+ F+P Sbjct: 579 ELRSRINWTQRMRKAISEDRIVLHFQPVFDAHNKNIVYYEALVRMRDEEGNLVYPNQFIP 638 Query: 547 VAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKY 606 G +D W+++ ++ + E + R AINLS + V + LA Sbjct: 639 ALENTGEMHLLDRWIVKLAIRSVRECK---KIERVAINLSVQAFKDENLVPVVKEALAVN 695 Query: 607 QIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLL 666 + + FE+TES +L N+ + + L E+GC AIDDFG+G++S+A LK + A + Sbjct: 696 GVAPECVTFELTESASLFNLAITRNMITQLNEIGCTFAIDDFGSGFSSFAYLKELPAHFI 755 Query: 667 KIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYL 726 K+DGSFI+N+ + +D +V S+ + + VAE+VENE+I + + G+D +QGY Sbjct: 756 KLDGSFIKNLHQDDVDKALVRSLIQVVQALGKKAVAEFVENEQILDILRKFGVDCVQGYH 815 Query: 727 IGKPQPLIDTLNE 739 G+P P ++E Sbjct: 816 TGRPVPFESLMDE 828 >UniRef50_A1SWA5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Alteromonadales RepID=A1SWA5_PSYIN Length = 724 Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 121/437 (27%), Positives = 212/437 (48%), Gaps = 46/437 (10%) Query: 330 AYVDPVVHLPN--------VRALNRALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQ 381 A+ DP+ LPN +A+ ++LR+ + A+ ++ + G + + ++G + + + Sbjct: 288 AHYDPLTGLPNRILLADRIQQAVAKSLRNDKYVAVAFIDLDGFKAVNDSHGHTIGDELLK 347 Query: 382 KLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLKQFRFFWDGMPMQPQI 441 K++ L +L G+ + + G++ ++ S +S L R + Sbjct: 348 KVAKRLKHVLREGDTLSRFGGDEFVAVIDNLS-----DPRESDLIVLRML--------ES 394 Query: 442 GVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRG--AMYLQR----------E 489 S V + I +G V + + PE + R AMY+ + + Sbjct: 395 VSSTLVVEKKLLKISASIG----VTFYPLDSAGPEQLLRHADQAMYMAKQQGKNRSYVFD 450 Query: 490 LKDKVAM------MNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISP 541 ++ VA+ + R+ QAL++N F L QP T +R + V E L+R + +++P Sbjct: 451 IEQDVAIKHHNEALKRIAQALKNNEFALYYQPKTDLRSNRVVGVEALIRWNHPDRGVLAP 510 Query: 542 DSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQ 601 FLP L I WVI+ LQ + ++N+SP + A F E+ + Sbjct: 511 AMFLPAVEHDILDIEIGKWVIKTALQQSQNWLSSGTDIPISVNISPLHLQHAEFVSELKR 570 Query: 602 LLAKY-QIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKN 660 +L +Y I A L FE+ ES+AL +++ ++ +LG + +IDDFGTGY+S LK Sbjct: 571 MLDQYPNINAGSLEFEILESSALKDIELVSKVMKECNQLGVRFSIDDFGTGYSSLTYLKR 630 Query: 661 VNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGID 720 + A+ LKID SF+R+++ ++ D I+ I LA++ + V+AE VE + E +LSLG Sbjct: 631 LPAETLKIDQSFVRDMLIDTDDKAIIQGIIELAKVFNLKVIAEGVETPQHGELLLSLGCY 690 Query: 721 YMQGYLIGKPQPLIDTL 737 ++QGY I KP D L Sbjct: 691 FVQGYGIAKPMHENDVL 707 >UniRef50_C6C4P4 Diguanylate cyclase/phosphodiesterase with MHYT sensor n=1 Tax=Dickeya dadantii Ech703 RepID=C6C4P4_DICDC Length = 678 Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 126/436 (28%), Positives = 200/436 (45%), Gaps = 22/436 (5%) Query: 320 RAVVRRIQRLAYVDPVVHLPNVRALNRALRDAPWSA--------LCYLRIPGMEMLVKNY 371 R ++ RLA D + LPN L R L A L Y+ + G +++ + Sbjct: 243 RQANDQLARLAMHDALTGLPNRMQLERELESCLHHARQHRQTFALMYMDLDGFKIVNDAW 302 Query: 372 GIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLKQF--- 428 G L Q ++ L L PG + ++ G++ L L + +E+ AL L Q Sbjct: 303 GHYLGDQLLAGVTTRLREYLGPGMTLARIGGDEFVL-LMRDCGEEQAAALADKLVQAIEQ 361 Query: 429 RFFWDGMPMQP--QIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYL 486 F G ++ +G+S +H LN + + N + Sbjct: 362 PFHQSGYTLRVTLSVGISLFPRDGATSHDL----RLNADTAMYSIKQTGRNGWIFYSPSF 417 Query: 487 QRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDVYH--EILLRMKGENDELISPDSF 544 + ++ L +AL N F L QP H E L+R + L+ PD F Sbjct: 418 SHHGNHQPELLQALPKALALNQFRLWYQPKYRPPNGPIHGFEALIRWQHPQKGLLLPDKF 477 Query: 545 LPVAHEFGLSSSIDMWVI-EHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLL 603 LP+A + GL +I WVI E Q ++ AIN+SP Q +S L Sbjct: 478 LPMAEKTGLIIAIGEWVINEACRQLQVWHQQGQVHWTVAINISPVQFDQHNLVSVISDAL 537 Query: 604 AKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNA 663 AKYQI + L E+TES A+ N++++ L L LG +++IDDFGTGY++ L+ + A Sbjct: 538 AKYQIPPYMLTLEITESVAMRNLEKSLNILHELDRLGVKVSIDDFGTGYSNLLSLRRLPA 597 Query: 664 DLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQ 723 LKID +F+++++ ++ + +V +I +AR + VVAE VE E +E + LG +Q Sbjct: 598 RELKIDRTFVKDLLLHNKNAVVVTTIIEMARSMNLEVVAEGVETPEQQELLTRLGCYSLQ 657 Query: 724 GYLIGKPQPLIDTLNE 739 G+L+ P P D +NE Sbjct: 658 GFLLAPPMP-PDHINE 672 >UniRef50_Q1AYR2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AYR2_RUBXD Length = 754 Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 120/438 (27%), Positives = 201/438 (45%), Gaps = 36/438 (8%) Query: 317 TRQRAVVRRIQRLAYVDPVVHLPN----VRALNRALR---DAPWSALCYLRIPGMEMLVK 369 TR++ ++ A D + LPN + L ALR D A+ ++ + +M+ Sbjct: 313 TRRKQAEEKLLHEASHDALTGLPNRAFFMERLGEALRRPGDGDRVAVLFIDLDRFKMIND 372 Query: 370 NYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLKQFR 429 + G + + + L L P + + +L G++ + L S +E + D L++ R Sbjct: 373 SLGHAMGDRLLVAAAERLKGCLRPQDTLARLGGDEFTVLLEGVSSEEAASVADRLLERLR 432 Query: 430 --FFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQ 487 F DG Y + ++LG ++ +A M R A+ Sbjct: 433 EPFRLDG------------YELFTAASVGVVLGGRERAGPEELLRDADIAMYRAKALGGG 480 Query: 488 RELKDKVAMM----------NRLQQALEHNHFFLMAQPITGMRGDVYH--EILLRMKGEN 535 R+ + M N L++A+E F QPI ++ + E L+R + Sbjct: 481 RKGIFEAGMHTRAMELFRLENELRRAIEREEFTAHYQPIVSLKTGLISGFEALVRWRHPE 540 Query: 536 DELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHR---FAINLSPTSVCQ 592 LI PD F+PVA E GL +++ V+ + + + P HR ++NLS + + Sbjct: 541 RGLIRPDEFVPVAEETGLIVPLELSVVREACASLVSWQREFPQHRPLTMSVNLSRNQLAR 600 Query: 593 ARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGY 652 P +V ++L + ++A L EVTES + NV A TL L+++ ++ IDDFG GY Sbjct: 601 PELPEQVERILLETGLDARSLRLEVTESAIMENVGSAAATLSRLRDMNIRVHIDDFGMGY 660 Query: 653 ASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIRE 712 +S + L + D LK+D SF+ + + D +IV +I LA + VVAE VE EE + Sbjct: 661 SSLSVLHQLPIDALKVDRSFVGRMDGANDDVEIVQTIITLAHNLGLDVVAEGVEREEHLD 720 Query: 713 AVLSLGIDYMQGYLIGKP 730 + LG DY QG+L +P Sbjct: 721 RLRRLGCDYAQGFLFSEP 738 >UniRef50_B3EBJ5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=B3EBJ5_GEOLS Length = 965 Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 116/430 (26%), Positives = 211/430 (49%), Gaps = 20/430 (4%) Query: 317 TRQRAVVRRIQRLAYVDPVVHLPNVR--------ALNRALRDAPWSALCYLRIPGMEMLV 368 T ++ I++LAY DPV LPN A+NRA RD+ A+ +L + + + Sbjct: 514 TDRKTAESTIEQLAYHDPVTGLPNRTLLHDRLQLAINRAERDSQGVAILFLDLDRFKAIN 573 Query: 369 KNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITA-----LDS 423 + G + Q + + + L + + V +L G++ + ++ + + + L+ Sbjct: 574 DSLGHAMGDQLLRLVGNRLLDCVRSSDTVARLGGDEFVVLISALDNDHAVGSVVMKILEQ 633 Query: 424 HLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGA 483 + ++ + IG+S + R + LL N + A N + Sbjct: 634 LCEPYQIDDHEVYTSSSIGISL-FPRDGRDAEELLK---NADMAMYQAKEAGRNTCHFFS 689 Query: 484 MYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMR-GDVYH-EILLRMKGENDELISP 541 L +++ + + +++ALE FFL+ QP +R G + E LLR + + ++ P Sbjct: 690 PELNMRATERLLLESTMRRALEREEFFLVYQPQMELRSGHIAGIEALLRWRHPDLGVVPP 749 Query: 542 DSFLPVAHEFGLSSSIDMWVI-EHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVS 600 ++F+P+A E GL + WV+ E Q + + P R A+N+S Q + + Sbjct: 750 NNFIPIAEETGLIVPLGEWVLAEACRQAVRWQQEGQPPLRMAVNVSARQFRQRNLGLRIE 809 Query: 601 QLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKN 660 ++L + ++ L E+TES + N ++A +TL+ L+++G ++IDDFGTGY+S + LK+ Sbjct: 810 KILMETGLDPALLELELTESAVMENPEEAILTLRQLKKMGITLSIDDFGTGYSSLSHLKH 869 Query: 661 VNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGID 720 D LKID SF++++ + D I +I LA K+ VVAE +E+ E E + D Sbjct: 870 FPIDRLKIDRSFVKHVTRDHNDATIAEAIIALAHSMKLTVVAEGIEHSEQMEFMHQRHCD 929 Query: 721 YMQGYLIGKP 730 MQGY + +P Sbjct: 930 TMQGYYLSRP 939 >UniRef50_Q2BMA7 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMA7_9GAMM Length = 932 Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 123/443 (27%), Positives = 204/443 (46%), Gaps = 40/443 (9%) Query: 317 TRQRAVVRRIQRLAYVDPVVHLPN----VRALNRALRDAP---WS-ALCYLRIPGMEMLV 368 ++ R++ +A D + LPN L AL DA W A+ ++ + +++ Sbjct: 491 NERKMAEERVKHMALHDALTGLPNRLLLEERLENALSDAKSHQWQLAVLFIDLDRFKLVN 550 Query: 369 KNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLKQ- 427 G Q ++++ L ++ + V +L G++ + LN + I + ++Q Sbjct: 551 DTLGHHEGDQLLVEVANRLHQVIGANDTVARLGGDEFVIVLNEIAGSTEINGVIEDIQQN 610 Query: 428 ----FRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENM----- 478 + M + P IGV+ IY GE + ++ NA M Sbjct: 611 FKPAVKLALQDMFVTPSIGVA----------IYPEDGE----TPVQLMKNADAAMYHAKA 656 Query: 479 -QRRGAMYLQRELKD----KVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRM 531 R A Y R L D ++++ N L QAL+ F L QP ++ + + E L+R Sbjct: 657 SGRNCAQYFNRSLDDSLKERISLENALNQALKLGQFELYYQPQLDVKSNRIIGAEALIRW 716 Query: 532 KGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAK-MPAHRFAINLSPTSV 590 +ISPD+F+P+A E GL I WV+ +A+ R + ++NLS V Sbjct: 717 NHPEKGMISPDAFIPLAEESGLIVDIGSWVLHQASSQLAQWRKQGFDQLSVSVNLSALQV 776 Query: 591 CQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGT 650 + F EV+ ++ +Y + L E+TES + N ++ L + LG QI++DDFGT Sbjct: 777 QKESFAREVADVIREYGVPEACLDLELTESMIMRNAEETIAALDKIHNLGIQISVDDFGT 836 Query: 651 GYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEI 710 GY+S + LK D LKID SF+++I ++ D I +I +A + V+AE VE Sbjct: 837 GYSSLSYLKRFPLDKLKIDRSFVQDITVDTDDAMICKTIISMAHNLNLQVIAEGVETNAQ 896 Query: 711 REAVLSLGIDYMQGYLIGKPQPL 733 E + G + QGYL KP P+ Sbjct: 897 LELLRDYGCEQYQGYLFAKPLPV 919 >UniRef50_C1DBY5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=3 Tax=Neisseriaceae RepID=C1DBY5_LARHH Length = 839 Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 136/464 (29%), Positives = 210/464 (45%), Gaps = 31/464 (6%) Query: 291 YTTQLTITSSSYLVFSFIVNYMAVLA--TRQRAVVRRIQRLAYVDPVVHLPNVR------ 342 YT LTIT +F +Y + + T+++ R+ LA DP+ LPN Sbjct: 367 YTEHLTITGIRGPDGTF-THYAGIFSDITQRKLNEERLHYLANHDPLTDLPNRTLLMERL 425 Query: 343 --ALNRALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQL 400 AL RA R AL +L + + + G + + Q ++ L+ L + V +L Sbjct: 426 GAALTRAHRQGKRVALMFLDLDRFKFINDTLGHAVGDKLLQTVASRLTGSLRASDTVARL 485 Query: 401 SGNDLALRLNTESHQERITALDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPVN-HIYLLL 459 G++ + L E I L + + D + + YV + V IY Sbjct: 486 GGDEFNIVL------EDIRDLRGVAQTAQKLIDRVQGMVTLDGHDVYVTASVGIAIYPDD 539 Query: 460 GELNTVAELSIVTNAPENMQRRGAMYLQRELKD-------KVAMMNRLQQALEHNHFFLM 512 G V ++ T A + RG Q D ++ + + L +AL F L Sbjct: 540 GSTPEVLRMNADT-AMYRAKERGKNNFQFFTADMNASTLARLRLESNLHRALARQEFQLH 598 Query: 513 AQPITGM-RGDVYH-EILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMA 570 QP + G +Y E LLR + +SP F+P+A E L S+I WV+E + Sbjct: 599 FQPKVDLAHGHIYGMEALLRWRSHELGPVSPADFIPIAEESNLISTIGEWVLEQACRQAR 658 Query: 571 E--NRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQ 628 N +P A+NLS + Q V ++L + L E+TES A+ N + Sbjct: 659 HWLNLGLLPG-TVAVNLSSKQMTQGDIVATVRRILEHSNLPGHYLELEITESVAMDNTGE 717 Query: 629 AQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVAS 688 TL++L+ LG +IAIDDFGTGY+S + LK + D+LKID SF+ ++ + D I ++ Sbjct: 718 MIRTLKNLKALGVRIAIDDFGTGYSSLSYLKQLPIDVLKIDRSFVTDLHEDRDDAAIASA 777 Query: 689 ICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQP 732 I + + + VAE VE EE R+ +L G Y QGYL +P P Sbjct: 778 IISMGQSLNLQPVAEGVEREEHRQFLLDHGCQYGQGYLFSRPVP 821 >UniRef50_Q3SME1 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SME1_THIDA Length = 928 Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 119/436 (27%), Positives = 216/436 (49%), Gaps = 32/436 (7%) Query: 317 TRQRAVVRRIQRLAYVDPVVHLPN--------VRALNRALRDAPWSALCYLRIPGMEMLV 368 TR+R R+ LA D + L N R + + R A+ + + + + Sbjct: 489 TRERQTAERLVYLAERDALTGLYNRHRFQQELARTMLDSDRQKMQCAVMFFDLDEFKTIN 548 Query: 369 KNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRL------NTESHQERITALD 422 +YG +++ +S L+ E + +L G++ A+ L E+ +R+ Sbjct: 549 DSYGHRAGDALLIRVAGEISALVRRNEVLARLGGDEFAILLPALQDNEAEALADRVVHAI 608 Query: 423 SHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSI--VTNAPENMQR 480 + + FRF + + +G++Y Y V+ +L A++++ +A +N R Sbjct: 609 AQIP-FRFEGQSLRVTTSVGIAY-YPAHAVD-----ADDLVARADIAMYQAKDAGKNTWR 661 Query: 481 --RGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPI-TGMRGDVYH-EILLRMKGEN- 535 R E++ +++ R+ AL+ F L Q + G + H E L+RM E+ Sbjct: 662 VFRADSAADSEMRTRLSWGERISNALDKGLFQLHFQGVYRADDGALSHLEALVRMTDEHR 721 Query: 536 -DELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQAR 594 D+LI P F+ A + G ID WV+ T+Q +A N +P+ A+NLS S+ + Sbjct: 722 PDQLIMPVHFIQRAEKSGRILDIDRWVVHETIQLLAANPC-IPS--IAVNLSGRSLSEPS 778 Query: 595 FPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYAS 654 P + L + + +LIFE+TE+ A+ +++ AQ ++ L++LGC + +DDFG G+AS Sbjct: 779 LPQTIGNGLREAGVNPSRLIFEITETAAVADLQDAQRMIEALRQLGCGVCLDDFGVGFAS 838 Query: 655 YARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAV 714 +A LK+++ D +KIDG FIR++ ++ + V ++ +A VVAEYVE+ + Sbjct: 839 FAYLKHLDVDTIKIDGIFIRDLPNDPDNQVFVQAMVSVALGLGKSVVAEYVEDGATLALL 898 Query: 715 LSLGIDYMQGYLIGKP 730 G+D +QGY + +P Sbjct: 899 RQFGVDLVQGYYLDRP 914 >UniRef50_Q7NZ89 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NZ89_CHRVO Length = 936 Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 134/448 (29%), Positives = 212/448 (47%), Gaps = 26/448 (5%) Query: 308 IVNYMAVLA--TRQRAVVRRIQRLAYVDPVVHLPN--------VRALNRALRDAPWSALC 357 I +Y+A+ + T ++A RIQ LA+ D + LPN A++ A+RD AL Sbjct: 481 ITHYVAIFSDLTERKAADERIQFLAHFDVLTSLPNRIHMQDRVELAIHNAVRDNQRLALL 540 Query: 358 YLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESH--- 414 L + + + ++ G Q + + ++ PGE + + G++ + L S Sbjct: 541 LLDLDRFKTVNESLGHSAGDTLLQVAADRIKSVMAPGEMLARQGGDEFIILLPVISDPGE 600 Query: 415 ----QERITALDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSI 470 ER+ D + + P IG+S Y ++ L+ N A + Sbjct: 601 AALAAERVR--DVFANPIELHNHVLTITPSIGIS-VYPDDGRDYETLVR---NADAAMYH 654 Query: 471 VTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEIL 528 ++ N + L ++ +A+ ++L+ ALE + F L QP M V E L Sbjct: 655 AKSSGRNSYKFYTADLNARAREILAIESQLRFALERDEFVLHYQPQVEMESGRIVGAEAL 714 Query: 529 LRMKGENDELISPDSFLPVAHEFGLSSSIDMWVI-EHTLQFMAENRAKMPAHRFAINLSP 587 +R + L+ P F+ VA E G I WVI E T Q + RA +P AINLS Sbjct: 715 IRWNHPSLGLLGPVRFIQVAEERGFIVQIGNWVIAEATRQLVEWRRAGLPELTLAINLSA 774 Query: 588 TSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDD 647 Q ++V Q L + L EVTES + + + T+ +++ +G +++IDD Sbjct: 775 LQFRQPDLALQVKQALESSGLPGHALDIEVTESIIMEDAQATIQTIDNMKNMGLRLSIDD 834 Query: 648 FGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVEN 707 FGTGY+S + LK AD LKID SF+R+I ++ D I +I ++A+ M VVAE VE Sbjct: 835 FGTGYSSLSYLKRFKADKLKIDRSFVRDIPQDADDSAIARAIINMAKNLNMQVVAEGVET 894 Query: 708 EEIREAVLSLGIDYMQGYLIGKPQPLID 735 E + + G D++QGYLI KP P D Sbjct: 895 MEQWQFLEQEGCDFVQGYLIAKPLPADD 922 >UniRef50_Q1PXY5 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PXY5_9BACT Length = 829 Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 118/445 (26%), Positives = 206/445 (46%), Gaps = 29/445 (6%) Query: 306 SFIVNYMAVLA--TRQRAVVRRIQRLAYVDPVVHLPNVRA--------LNRALRDAPWSA 355 +I+N++ V+ T ++ + +A DP+ +L N R L + R A Sbjct: 381 GYIINFIGVIEDITERKKFEEMLVVMAEHDPLTNLFNRRRFQVELEYWLGYSKRYNTGGA 440 Query: 356 LCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRL------ 409 L +L I + + G + + + + L + P + + +L G++ A+ L Sbjct: 441 LLFLDIDNFKYINDTLGHKVGDEILVEFAILLKERVRPNDIIARLGGDEFAVILPNTNVD 500 Query: 410 NTESHQERITALDSHLKQFRFFWD-GMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAEL 468 + S E+IT S K FR + G + +G++ S L L A++ Sbjct: 501 HARSFAEQITQ--SAQKHFRVLNERGHNITTSLGIALFPDHS------LEADALLACADM 552 Query: 469 SI--VTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDVY-- 524 ++ A +N ++ ++ ++ + R++ AL + F + QPI +R + Sbjct: 553 AMYGAKEAGKNQCCIFSLEQKQNIESRFLWDKRIRSALGKDDFEIYLQPIVDLRSNAVFG 612 Query: 525 HEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAIN 584 +E LLRM GEN ELI P FLP A G ID WV+ + + + IN Sbjct: 613 YEALLRMVGENGELIPPAEFLPYAERHGSILDIDRWVVRNAFRLFVRYNMQEKKAVLEIN 672 Query: 585 LSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIA 644 LS ++ + + + L+ Q +A + FEVTES + N++ A+ + L G + A Sbjct: 673 LSGKAITDSGMLSFIKEELSASQADARYITFEVTESAVVENIEYARYFMNDLCNQGFRFA 732 Query: 645 IDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEY 704 +DDFG G+ S+ LK++ D LKIDG FIRN+ N D V +I + + ++AE+ Sbjct: 733 LDDFGIGFCSFTYLKHLPVDFLKIDGGFIRNLPDNPTDQCFVKAIADIGNGLEKKIIAEF 792 Query: 705 VENEEIREAVLSLGIDYMQGYLIGK 729 VEN++ + +G+ Y QG+ K Sbjct: 793 VENKQTISLLKEIGVVYGQGHFFSK 817 >UniRef50_Q7P0M4 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7P0M4_CHRVO Length = 633 Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 92/250 (36%), Positives = 139/250 (55%), Gaps = 7/250 (2%) Query: 488 RELKDKVA----MMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISP 541 RE+ +VA M NRL++A+E +L+ QP M G + E LLR + ++ LI P Sbjct: 363 REMNTQVAERLLMENRLRRAMEQEQLYLVYQPQYDMAGQRLLGCEALLRWRDPDEGLIMP 422 Query: 542 DSFLPVAHEFGLSSSIDMWVIEHTL-QFMAENRAKMPAHRFAINLSPTSVCQARFPVEVS 600 F+PVA + GL + WV++ Q RA + R A+N+S + + F +V Sbjct: 423 GRFIPVAEDTGLIVPLGRWVLDQACRQASLWLRAGLEPMRVAVNVSAHQLMRHDFIDDVR 482 Query: 601 QLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKN 660 + L ++ + L EVTES + + A L ++ +G ++AIDDFGTGY+S A LK Sbjct: 483 EALQRHALPGHCLELEVTESTLMADADLASRQLAVIKAMGVRLAIDDFGTGYSSLAYLKR 542 Query: 661 VNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGID 720 DL+KID SFI ++ + + IV++I HLA M +AE VENE + + +LG + Sbjct: 543 FAPDLVKIDRSFISDLPGDEENAAIVSAIVHLAGALGMETLAEGVENENQQRFLQTLGCE 602 Query: 721 YMQGYLIGKP 730 MQGYL+G P Sbjct: 603 AMQGYLLGSP 612 >UniRef50_Q0A9M6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A9M6_ALHEH Length = 942 Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 84/251 (33%), Positives = 138/251 (54%), Gaps = 4/251 (1%) Query: 485 YLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDV--YHEILLRMKGENDELISPD 542 + + EL+++V + +L QAL+ + F LM QPI +R ++E+L+RM+ + EL+ P Sbjct: 687 HAKGELQERVYWVEQLHQALQGDAFELMVQPIVRLRDRSVRHYEVLVRMRDPSGELLLPG 746 Query: 543 SFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQL 602 F+P A G +D WV+ L+ + R + A+NLS S+ ++ Sbjct: 747 RFIPFAEHSGQIVQLDRWVLRAALKVL--RRVQSQGIGLAVNLSGQSLHDDGLTTFLADE 804 Query: 603 LAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVN 662 L + LI E+TE+ A+T+ A+ L+ ++ LGCQ A+DDFG G++S+ L + Sbjct: 805 LRASGADPEHLILEITETAAVTDFSTARGVLEGIRALGCQTALDDFGVGFSSFHYLGQLP 864 Query: 663 ADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYM 722 D +KIDGSFIR++ N IV +I +A +AE+V+ E + + GI Y Sbjct: 865 VDYIKIDGSFIRSLPHNEDSRIIVRAIADIAAGFGKAAIAEFVDQEVLVPMLRDYGIAYG 924 Query: 723 QGYLIGKPQPL 733 QGY +G+P P+ Sbjct: 925 QGYHLGRPVPV 935 >UniRef50_A8EV29 EAL/GGDEF domain protein n=2 Tax=Campylobacterales RepID=A8EV29_ARCB4 Length = 851 Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 122/454 (26%), Positives = 213/454 (46%), Gaps = 37/454 (8%) Query: 302 YLVFSFIVNYMAVLATRQRAVVRRIQRLAYV---DPVVHLPNVRALN--------RALRD 350 +++ I+ MA L +A+ + Q L Y DP+ L N R N RA R Sbjct: 402 HIIVESILTTMANLVGSVKAINKYTQDLEYYAARDPLTDLFNQRVFNDMMRYEIKRAQRH 461 Query: 351 APWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLN 410 AL + + + N+G Q ++ L + V + G++ + L Sbjct: 462 NYSFALMVIDCDNFKPINDNFGHSFGDTLLQTVATTLKKEKRDEDIVARYGGDEFTIILP 521 Query: 411 TESHQERITALDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSI 470 + +E + + K+ P IG++ I + + +T ++ + Sbjct: 522 ECTEKEAMIVANRISKKMATEKIVAPDGSNIGITIS--------IGICVYPTHTTSQKDM 573 Query: 471 VTNAPENM---QRRGAMYLQRELKDKVAMMNRLQQ--------ALEHNHFFLMAQPITGM 519 A M + G ++ K+ ++ + +L+Q A+E+N QPI Sbjct: 574 FIIADSMMYQAKEEGKNAIKIPTKNDISDILKLKQEKTALLLKAIENNKIEPYFQPIKPS 633 Query: 520 RGD---VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKM 576 D V HE+L+R+ ++D++IS F+ +A GL + +D+ VIE Q + ++ + Sbjct: 634 SKDSNIVIHELLMRIH-QDDKIISAFEFIEIAESKGLINIMDLMVIEKAFQKIQDS---L 689 Query: 577 PAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHL 636 + INLSP S+ F ++++ KY I +++FE+TE + N + + +L Sbjct: 690 YSGLLFINLSPKSLIIGNFIDKINEFAKKYDINKEKIVFEITERETVKNFTLLEKFVHNL 749 Query: 637 QELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMK 696 + G + AIDDFG G++S+ +K D LKIDG FI NI ++ D V+S+ LA+ Sbjct: 750 KSEGFKFAIDDFGAGFSSFHYVKKFPIDYLKIDGDFIININNDEKDKAFVSSMITLAKEL 809 Query: 697 KMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKP 730 + +AE+VENEEI E + +L IDY QG+ IG+P Sbjct: 810 NIQTIAEFVENEEIIEVLDTLKIDYYQGWHIGRP 843 >UniRef50_B7RX37 Putative uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RX37_9GAMM Length = 1317 Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 85/263 (32%), Positives = 142/263 (53%), Gaps = 21/263 (7%) Query: 492 DKVAMMNRLQQALEHNHFFLMAQPI----------TGMRGDVYHEILLRMKGENDELISP 541 DK L+QAL + F L AQPI TG ++E+LL + + L SP Sbjct: 1057 DKSKTKQDLEQALATDRFVLRAQPIMQVSVEGKQPTGR----HYELLLGLANPDGSLASP 1112 Query: 542 DSFLPVAHEFGLSSSIDMWVIEHTL----QFMAENRAKMPAHRFAINLSPTSVCQARFPV 597 + F+ A +G + +D WV++ Q M E + ++P AINLS SV F Sbjct: 1113 EEFIQSAERYGFMNLVDRWVVQEAFRWVSQLMDEEK-EVP--NLAINLSGGSVTDDDFME 1169 Query: 598 EVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYAR 657 + + ++++ + + FE+TE+ ++N+ +A ++ + +GC+ +IDDFGTG AS+ Sbjct: 1170 YLLEQISEFGVGTSHICFEITETGTISNLVKAADFVRAFRNIGCKFSIDDFGTGLASHNY 1229 Query: 658 LKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSL 717 L+ + D +KIDG+F+ I N DY + SI LA +AE VEN++I E + + Sbjct: 1230 LRELPVDYVKIDGTFVTGIHKNRADYAMARSINDLAHFLGQETIAESVENDQIIEKLHEI 1289 Query: 718 GIDYMQGYLIGKPQPLIDTLNEI 740 G+DY+QG+ +G P+ L + ++ Sbjct: 1290 GVDYLQGWGVGMPKLLTEVTEDL 1312 >UniRef50_Q0AGS8 Diguanylate phosphodiesterase n=2 Tax=Nitrosomonas RepID=Q0AGS8_NITEC Length = 507 Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 78/259 (30%), Positives = 135/259 (52%), Gaps = 5/259 (1%) Query: 479 QRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPI----TGMRGDVYHEILLRMKGE 534 Q G + + + +R+ A+E F L Q I G Y+EIL+RM E Sbjct: 239 QHSGGDATHQPARVSIDSSSRIILAIEQEEFRLFCQRILPVKPGQNATTYYEILIRMAEE 298 Query: 535 NDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQAR 594 LI P +FLP+ + L +D WV++ +Q++++ F INLS +++ Sbjct: 299 ESNLIPPGAFLPLVEKHNLMPRLDGWVVKKIIQYLSKKNVSTEI-SFCINLSNSTLKDPA 357 Query: 595 FPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYAS 654 F V LL ++ +L FE+ + + N++ + ++ +Q+LGC +++ F S Sbjct: 358 FADHVQDLLKNAKVPPDKLCFEIEAFDVIANLQNTVLFVKKMQQLGCLVSLCSFNHDRTS 417 Query: 655 YARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAV 714 + LK++ AD LKIDGS + NI+ ++ D + + +I AR K+ + E VE + I E + Sbjct: 418 FDLLKHIRADFLKIDGSIVCNILRDAEDLKKIENINKFARALKIGTIGELVETQAILEKL 477 Query: 715 LSLGIDYMQGYLIGKPQPL 733 +GIDY QG+ +G+P P+ Sbjct: 478 AEIGIDYAQGFAVGQPHPI 496 >UniRef50_Q1QZB7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QZB7_CHRSD Length = 831 Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 132/432 (30%), Positives = 202/432 (46%), Gaps = 17/432 (3%) Query: 319 QRAVVRRIQRLAYVDPVVHLPN-------VRALNRALR-DAPWSALCYLRIPGMEMLVKN 370 R +I RLA+ D + LPN + AL A R P AL L I + L + Sbjct: 382 HREAQAKIHRLAHHDTLTGLPNRQTLYARLDALQAACRAQGPGGALIMLDIDNFKALNDS 441 Query: 371 YGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNT--ESHQERITALDSHLKQF 428 G + ++ L D+ +L GN+ AL + +H + AL HL Sbjct: 442 RGNAVGDTLLLHVARRLKRFARHEHDLARLGGNEFALIVTDLPSAHDDADEALSRHLDTV 501 Query: 429 RFFWDGMPMQPQIGVSYCYVRSPV--NHIYLLLGELNTVAELSIVTNAPE--NMQRRGAM 484 R G+ + + V + EL A L++ E N R Sbjct: 502 RQAIGGVYDLDDFTHTTTHSLGGVRFGDGDVSADELVKRASLAMSHAKQEGGNASRAFRP 561 Query: 485 YLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDVYH-EILLRMKGENDELISPDS 543 +++ L+ +V M L+QAL + L QP RG + E L+R + +ISP Sbjct: 562 EMEQALQVRVCMEAELRQALATDQLQLFYQPQVDTRGTIIGAEALIRWQHPERGMISPGD 621 Query: 544 FLPVAHEFGLSSSIDMWVIEHTLQFMAE-NRAKMPAH-RFAINLSPTSVCQARFPVEVSQ 601 F+P+A E GL I WV++ Q +A +R +H + +IN+S QA F V Sbjct: 622 FIPLAEETGLIEQIGGWVLDTACQQLATWSRHDATSHLQLSINVSVRQFQQADFVSRVLD 681 Query: 602 LLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNV 661 +A+++ A +L E+TES L NV+ + L++ G ++DDFGTGY+S A LK + Sbjct: 682 TIARHRAPAERLTLELTESLLLANVEGVIDKMTRLKQHGLNFSLDDFGTGYSSLAYLKRL 741 Query: 662 NADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDY 721 + LKID SF+R+++ ++ D IV +I LA ++ VAE VE + RE + LG Y Sbjct: 742 PFNTLKIDVSFVRDVLVDANDAAIVKTIVALADSLQLKSVAEGVEMQAQREFLERLGCHY 801 Query: 722 MQGYLIGKPQPL 733 QGY G+P P+ Sbjct: 802 HQGYYFGRPSPI 813 >UniRef50_Q2SCC3 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SCC3_HAHCH Length = 848 Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 116/436 (26%), Positives = 210/436 (48%), Gaps = 39/436 (8%) Query: 324 RRIQRLAYVDPVVHLPNVRALN----RALRDAPW---SALCYLRIPGMEMLVKNYGIMLR 376 R+++ A DP+ LPN RAL+ R L + S L Y+ + +++ G + Sbjct: 417 RQLEHQALHDPLTDLPNRRALDNYLHRLLSENDTHLVSGLLYIDLDQFKLINDTCGHEVG 476 Query: 377 IQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDS---HLKQFRFFWD 433 +KLS L + ++SG++ AL + + + + + + ++ ++ Sbjct: 477 DLLLKKLSSLLRKSTPERGMLARISGDEFALVIEGVTEAQTLAVAEQVRQTISHYQLAYE 536 Query: 434 GM--PMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELK 491 + + IGV++ + H L ++ A E+ + R +Y Sbjct: 537 DLVFSVGASIGVTFITDQDNSRHAVLSRADIACY-------QAKESGRDRVRVY---HAG 586 Query: 492 DKVAM--------MNRLQQALEHNHFFLMAQPI--TGMRGDVYH----EILLRMKGENDE 537 D V M +++L+ A++ HF L Q I GD E+L+R++ DE Sbjct: 587 DTVMMRYHGELEWLSQLKNAIQLGHFELYQQGIFCVDENGDAVDMPGCEVLIRLR-RQDE 645 Query: 538 LISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPV 597 ++SP SF+PVA FG ID WV E + M+ + + +NLS + F Sbjct: 646 MVSPGSFIPVAERFGFMPIIDRWVTETLFRRMSSSVGL--EFIYNVNLSGATFNDHGFFK 703 Query: 598 EVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYAR 657 EV KY+I+ ++ FEVTES AL ++ Q + ++ + + G + A+DDFG+G ASY Sbjct: 704 EVEGWAEKYRIDRSRVCFEVTESVALADIAQTREIIRSMAQKGYRFALDDFGSGSASYGY 763 Query: 658 LKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSL 717 L + + +K+DG F+R ++ + ++ S+ +AR++ M +AE VE+ +I ++ L Sbjct: 764 LSELPVNYVKLDGGFVRRVLEDPSAEIVIESLVKIARLRSMHCIAECVESRDIACRMVKL 823 Query: 718 GIDYMQGYLIGKPQPL 733 GI +QG+ +PQP+ Sbjct: 824 GIPVLQGFFYDRPQPM 839 >UniRef50_C6BPU5 Diguanylate cyclase/phosphodiesterase with MHYT sensor n=1 Tax=Ralstonia pickettii 12D RepID=C6BPU5_RALP1 Length = 699 Score = 142 bits (359), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 120/443 (27%), Positives = 207/443 (46%), Gaps = 31/443 (6%) Query: 315 LATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRDAPWSA--------LCYLRIPGMEM 366 L + R +R+ LA +D + LPN A+ R++++ A + ++ + ++ Sbjct: 249 LTSSLREARQRLTMLASIDHLTSLPNREAIYRSIQEEIAGATGSGTGFHVLHVNLDSFKV 308 Query: 367 LVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLK 426 +YG+ + + ++ L V +L G++ L + +++ E++ L S+L Sbjct: 309 FNDSYGMAIGDSLLRIVAVKLVEAAGRSAVVGRLGGDEFVLVVR-DANMEQVLDLASNLV 367 Query: 427 QFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMY- 485 + M+ I V I + + A S++ NA M A Sbjct: 368 E--------SMRGGISVDNATTVRVTLSIGIASYPKDGEAAESLLKNADGAMSAAKAAGG 419 Query: 486 ---------LQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDVYH--EILLRMKGE 534 + ++ +M LQ +E F L QP G G E L+R Sbjct: 420 NGFRFYGPDISENSTRRLQIMQALQDTVEKGGFKLHFQPKFGCDGQSIEGAEALIRWTHP 479 Query: 535 NDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAE-NRAKMPAHRFAINLSPTSVCQA 593 + ++ P F+P+A GL S I WVI T + + E +RA +P R A+NLSP + Q Sbjct: 480 DLGVVPPLDFIPLAERTGLISQIGNWVIGQTCRHILEWDRAGLPPLRIAVNLSPQQLQQP 539 Query: 594 RFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYA 653 + V++++ ++ ++ +L+FE+TE+ A+ +Q ++ Q G IAIDDFGTGY+ Sbjct: 540 GYIRTVNEIVGQHGVDPRRLMFEITETVAMEVAEQTTANIREFQTSGFDIAIDDFGTGYS 599 Query: 654 SYARLKNVNADLLKIDGSFIRNIVSNSLD-YQIVASICHLARMKKMLVVAEYVENEEIRE 712 S A L+ A LKID F R + + + Y IV++I LA +M VVAE VE + + Sbjct: 600 SLAYLQRFRAKQLKIDRFFTRGLDEHGDEGYAIVSAIIGLAHSLRMQVVAEGVETQSQLQ 659 Query: 713 AVLSLGIDYMQGYLIGKPQPLID 735 + + D +QG+L+GKP D Sbjct: 660 KLRDMSCDQVQGFLLGKPMGAED 682 >UniRef50_B8H3I6 Sensory box/GGDEF family protein n=4 Tax=Caulobacter RepID=B8H3I6_CAUCN Length = 547 Score = 142 bits (358), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 80/252 (31%), Positives = 140/252 (55%), Gaps = 10/252 (3%) Query: 486 LQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDV--YHEILLRMKGENDELISPDS 543 + R +K +A L A+ F L QP+ + + +HE+L+R + SP + Sbjct: 279 MNRSVKRTLARAGALGVAVSQRRFNLAFQPVVSLSTGLAHHHEVLVRFEDGG----SPFA 334 Query: 544 FLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLL 603 + +A EF L +D ++E ++ +A + + + A+N+S ++ F V +LL Sbjct: 335 LIRMAEEFDLIEELDHAIVEQAVKKLANDSERK--LKLAVNVSGQTIGNETFVEHVGRLL 392 Query: 604 AKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNA 663 AK+ +LIFE+TE+ A+ N+ A +Q L+ +G + +DDFG G +S++ L+ + Sbjct: 393 AKFNEAKGRLIFEITETRAIDNLATANQHIQSLRSMGSLVCLDDFGAGSSSFSYLQQLAL 452 Query: 664 DLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQ 723 D++KIDG ++R + NS D +V + L R K+ VAE VE E+ + + S+G+D+ Q Sbjct: 453 DIVKIDGRYVRELADNSRDGALVRRLVELCRDLKVRTVAEMVETSEVEDVIRSVGVDFAQ 512 Query: 724 GYLIGKP--QPL 733 G+L GKP +PL Sbjct: 513 GWLYGKPADKPL 524 >UniRef50_D0J3T4 Diguanylate cyclase/phosphodiesterase n=3 Tax=Burkholderiales RepID=D0J3T4_COMTE Length = 728 Score = 142 bits (357), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 82/250 (32%), Positives = 140/250 (56%), Gaps = 2/250 (0%) Query: 485 YLQRELKDKVAMMNRLQQALEHNHFFLMAQP-ITGMRGDVYH-EILLRMKGENDELISPD 542 ++ + +++ + N L+ A++ L QP I RG++ E LLR +I+PD Sbjct: 450 HMGSDASEQLELQNDLRHAIQRGQMELHYQPKIDSERGNIIGVEALLRWAHPERGMIAPD 509 Query: 543 SFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQL 602 F+P+A FG+ +S+ WVIE + +A R R AINLS + ++ ++Q Sbjct: 510 IFIPLAERFGIINSLGNWVIEEACRQLALWRDMGLQMRVAINLSVHQLRESGLADRITQT 569 Query: 603 LAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVN 662 L ++ ++A QL+ E+TES A+ + + Q ++ L+++G ++IDDFGTGY+S L+ + Sbjct: 570 LLRHDVQASQLLCEITESVAMEDTQATQRAIEELRDIGIFLSIDDFGTGYSSLNYLRQLP 629 Query: 663 ADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYM 722 A LKID SFIR++ + +V ++ LA + VVAE VE R+ ++ + D + Sbjct: 630 AQQLKIDRSFIRDLETEEDARAVVHAVVRLAHALGLRVVAEGVETAGQRDILIDMQCDEL 689 Query: 723 QGYLIGKPQP 732 QGY +P P Sbjct: 690 QGYFYARPMP 699 >UniRef50_B9M1S6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=B9M1S6_GEOSF Length = 749 Score = 142 bits (357), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 122/433 (28%), Positives = 197/433 (45%), Gaps = 26/433 (6%) Query: 317 TRQRAVVRRIQRLAYVDPVVHLPNVRAL---------NRALRDAPWSALCYLRIPGMEML 367 T+++ +I+RLAY D + LPN RAL +A RD L +L + +++ Sbjct: 288 TQRKVNEEQIRRLAYYDNLTGLPN-RALLMDRLEQMLTKARRDKTRVVLLFLDLDRFKVI 346 Query: 368 VKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLKQ 427 G Q ++++ L L + + ++ G++ + E Q ++ L HL Sbjct: 347 NDTMGHAHGDQLLVQVANRLRQALRSSDTLARIGGDEFVVLFTLEGPQLNVSPLAQHL-- 404 Query: 428 FRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLL--GELNTVAELS-IVTNAPENMQRRGAM 484 D + I Y + + G+ N++ + + A + +G Sbjct: 405 ----IDSITSVYPISGRDVYASTSIGIATFPDDGGDCNSLLRCADMAMYAAKEGGGKGYH 460 Query: 485 YLQRELKDK----VAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDEL 538 + E+ K + M L+ ALE FFL QPI R V E LLR L Sbjct: 461 FYSPEMNLKAHARMEMETNLRHALEREEFFLEFQPIVNARDGRLVGAEALLRWSDPEKGL 520 Query: 539 ISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENR-AKMPAHRFAINLSPTSVCQARFPV 597 I PD F+ VA E G + WV+ + M + R A +P R ++N+S CQA F Sbjct: 521 IMPDMFIQVAEESGFIVPLGEWVLRTACRKMKDWREAGLPPFRISVNVSGRQFCQANFTD 580 Query: 598 EVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYAR 657 V ++ + ++ L E+TE++ + +V+ L L+EL I IDDFG GY+S Sbjct: 581 TVCSIIRETGMDPSFLALEMTETSLMVDVEATAKALMQLKELDISIVIDDFGAGYSSLGY 640 Query: 658 LKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSL 717 L+ D +KID SFIR++ S++ D IV +I +A K+ VVAE VE E + + Sbjct: 641 LQKFPIDRIKIDRSFIRDLSSHANDKAIVEAIIAMAARLKLQVVAEGVETSEQLDFLKEQ 700 Query: 718 GIDYMQGYLIGKP 730 G +QG+ +P Sbjct: 701 GCHEIQGFYFHRP 713 >UniRef50_A4G4I8 Putative uncharacterized protein n=2 Tax=Herminiimonas arsenicoxydans RepID=A4G4I8_HERAR Length = 937 Score = 142 bits (357), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 122/454 (26%), Positives = 213/454 (46%), Gaps = 30/454 (6%) Query: 297 ITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL-------- 348 I + L+ ++ + V +R+ A+ ++ A DP+ L N R R L Sbjct: 475 IRNREGLIIGVVLVFHDVSDSRKLAI--QLSHQAAHDPLTGLFNRREFERRLELAIDTLA 532 Query: 349 RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALR 408 R + AL YL + +++ G + ++++ L PL+ + + +L G++ Sbjct: 533 RQSKQHALLYLDLDQFKIVNDTCGHSAGDELLRQITALLQPLVRDSDTLARLGGDEFGAF 592 Query: 409 LNTESHQERI---TALDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTV 465 L S + I L + F F W IGVS V N L L +L + Sbjct: 593 LENCSPESAIRIAEKLRQTICDFHFVWQDKIFP--IGVSIGLVNFNTN--ALSLPDLLSA 648 Query: 466 AELSIVTNAPENMQRRGAMYLQRE-----LKDKVAMMNRLQQALEHNHFFLMAQPITGMR 520 A+ + A + + R +Y + + +V R+Q+A E++ F L+AQ I +R Sbjct: 649 ADTACYV-AKDAGRNRVHIYRPEDHQLAVREGEVKWNERIQKAFENDRFHLLAQRIVNIR 707 Query: 521 GD----VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTL-QFMAENRAK 575 D ++ E+ L M E LI +FLP A + +ID W+I T Q A R Sbjct: 708 SDQKDFLFDELTLVMADEFGRLIPTSAFLPAAERYHFMPTIDRWIIRTTFAQHAATIRNA 767 Query: 576 MPAHRFA--INLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITL 633 AH I +S S+ F + + Y + + F + E+ A+TN+ +A + Sbjct: 768 RDAHPHVMLIRVSSNSLDDESFVDFIQEQFVHYALPYQTICFAIAETTAITNLTRALHFI 827 Query: 634 QHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLA 693 L+ LGCQIA+ DFG+G +S+A LK++N D LKIDGS+++ + ++ +D + +I +++ Sbjct: 828 GKLKPLGCQIALYDFGSGMSSFAYLKHLNVDFLKIDGSYVKGMANDLVDCAKIEAIQNIS 887 Query: 694 RMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLI 727 + + +A+ VE+E + + +GI Y QG I Sbjct: 888 SVMGIETIAQNVEDEITLDKLKKIGIGYAQGSAI 921 >UniRef50_Q7MAP6 GGDEF FAMILY PROTEIN n=1 Tax=Wolinella succinogenes RepID=Q7MAP6_WOLSU Length = 698 Score = 141 bits (356), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 113/418 (27%), Positives = 196/418 (46%), Gaps = 27/418 (6%) Query: 324 RRIQRLAYVDPVVHLPNVRALNRALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKL 383 R ++ Y D + LPN R L L+ AP L L I + + YG + +++ Sbjct: 291 RLLEDQLYTDKLTSLPNRRKLLEDLKHAPSPFLILLNIDSFKEVNDFYGTEIGDFVLKEI 350 Query: 384 SHWLSPLLEPGE-DVYQLSGNDLALRLNTESHQERITAL--------DSHLKQFRFFWDG 434 + L + G +Y+L ++ AL S E + + DSHL F Sbjct: 351 AKRLGLFVHQGRFRLYKLQADEYALLDMECSRDEDLEGVGQKVHDDVDSHL----IFLKE 406 Query: 435 MPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKV 494 + QI + + ++ + +L+ N P + M + +E ++ Sbjct: 407 QEIHIQISAGMAFGENET-----VMTRADIALKLAKKHNKP-FLIYNDTMMVMKEYEENF 460 Query: 495 AMMNRLQQALEHNHFFLMAQPI-TGMRGDVY-HEILLRMKGENDELISPDSFLPVAHEFG 552 + L+ AL+ N QP+ +VY +E L R+ GE+ ++ SP F+ ++ + Sbjct: 461 RWIRMLKNALDDNRIICYFQPVFNNKTKEVYKYECLARLLGEDGKVYSPFFFIEISKKAR 520 Query: 553 LSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQ 612 L I ++ + E K F+INLS + + + L ++ + A + Sbjct: 521 LYHRITQAIVSDACRVFKEVNCK-----FSINLSIDDILDHHTINFIIEELERHGV-AHK 574 Query: 613 LIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSF 672 IFE+ ES + N ++ +Q +++LGCQIAIDDFG+GY+++A + +N D++KID S Sbjct: 575 AIFEILESEGIDNYEEVDAFIQRVRKLGCQIAIDDFGSGYSNFAHILRLNVDIIKIDASI 634 Query: 673 IRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKP 730 I+N ++ I +I +R + VAE+V ++EI E V S G+DY QGY IG+P Sbjct: 635 IQNSDTDKNSQIIAKTIVEFSRKLGIKTVAEFVHSKEILETVKSFGVDYSQGYFIGEP 692 >UniRef50_C7RS22 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RS22_9PROT Length = 1006 Score = 141 bits (356), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 131/468 (27%), Positives = 214/468 (45%), Gaps = 23/468 (4%) Query: 287 IYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNR 346 ++P + T ++ +V ++ + A +A I+ LA+ D + LPN R L+ Sbjct: 536 VFPEWLTISSVRDGDGVVTHYVSALTDMSA--HKAAQEEIRHLAFYDALTGLPNRRLLHD 593 Query: 347 ALRDAPWS--------ALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVY 398 LR A S AL ++ + + L G + + Q++ LS + G+ V Sbjct: 594 RLRVAIASSVRSERQGALLFIDLDNFKTLNDTLGHDMGDRLLQQVGQRLSSSVREGDTVA 653 Query: 399 QLSGNDLALRLNTESHQERITALDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLL 458 +L G++ + L + A S + + + +P + Y +P I L Sbjct: 654 RLGGDEFVVMLENLGERPEEAAGQSRIVGEKII--KLLNRPYDLSGHDYHNTPSVGITLF 711 Query: 459 LG------ELNTVAELSI--VTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFF 510 G EL A+L++ + N R +Q + + + L+ A+ FF Sbjct: 712 GGQQVGIDELMKRADLAMYEAKASGRNALRFFDPRMQAVVTARADIEKDLRAAVGRQSFF 771 Query: 511 LMAQPITGMRGDVYH-EILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFM 569 L QP G V E LLR + + +SP F+PVA E GL + +WV+E Sbjct: 772 LAYQPQVDASGQVIGAEALLRWQHQQRGTVSPAEFIPVAEETGLILPLGLWVLETACAQA 831 Query: 570 AENRAKMPAHRF--AINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVK 627 A A+ RF ++N+S QA F +V +LA+ L E+TES L NV+ Sbjct: 832 ALWAARPGRERFTVSVNVSARQFRQANFVDQVLAVLARSGAHPRNLKLELTESMLLDNVQ 891 Query: 628 QAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVA 687 + L+ G ++DDFGTGY+S + LK + D LKID SF+R+++++ D I Sbjct: 892 DIIAKMSALKARGVGFSLDDFGTGYSSLSYLKQLPLDQLKIDQSFVRDLLTDPNDEVIAR 951 Query: 688 SICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLID 735 +I LAR + V+AE VE+ E ++A+ + G QGYL +P L D Sbjct: 952 TIIALARTLGLSVIAEGVESVEQQDALAAQGCLAYQGYLFSRPLALAD 999 >UniRef50_Q47WU6 GGDEF/EAL domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47WU6_COLP3 Length = 541 Score = 141 bits (356), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 121/426 (28%), Positives = 203/426 (47%), Gaps = 26/426 (6%) Query: 324 RRIQRLAYVDPVVHLPNV--------RALNRALRDAPWSALCYLRIPGMEMLVKNYGIML 375 I+RLA+ D + +LPN +AL RA R+ A+ ++ I + + G + Sbjct: 105 EEIKRLAFFDSLTNLPNKELCQDRIEQALARAARNNTSIAVLFIGIDDFKAVNDQQGHVG 164 Query: 376 RIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHL-----KQFRF 430 + ++++ LS L G+ + +++G + + L T S ++ I + K +R Sbjct: 165 GDKLLKQIAKRLSGQLRSGDTLARITGVEFIIILETISPKDNINMFADKILLKLTKCYRI 224 Query: 431 FWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMY---LQ 487 + + IGV+ P + Y EL A+ ++ A E + R A + LQ Sbjct: 225 AMQEVYITGNIGVALY----PSDGEYG--KELIQHADTAMCF-AKEKGRNRLAFFSKELQ 277 Query: 488 RELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSFL 545 ++ K + +L+ A+E + L QPI + + E LLR E ++PD F+ Sbjct: 278 EQVNIKKKIAEQLRGAMERDELVLHYQPIIATHSNEIIAVEALLRWNNELLGDLAPDVFI 337 Query: 546 PVAHEFGLSSSIDMWVI-EHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLA 604 P+A E G+ + I WV+ + LQ + P IN+S + + + VS L Sbjct: 338 PIAEEIGIITKIGDWVLAQACLQNKTWQQQGYPCIVMTINMSVMQLAISNYARTVSTSLT 397 Query: 605 KYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNAD 664 + +E L E TE+ + + KQ+ + L+ L LG IA+DDFGTGY+S L + Sbjct: 398 ETSLEPQYLELEFTENTLMKDAKQSIVQLRELSALGVSIALDDFGTGYSSIKHLAKFKLN 457 Query: 665 LLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQG 724 LKIDGSFI++I ++ D +I LA+ K+ V AE VE E +++ +D MQG Sbjct: 458 KLKIDGSFIKHIPESAGDIIATRAIIALAKQLKLHVTAEGVETANQCEFMMTNNVDSMQG 517 Query: 725 YLIGKP 730 Y +P Sbjct: 518 YHFSRP 523 >UniRef50_Q607T2 Sensory box protein/GGDEF domain protein n=2 Tax=cellular organisms RepID=Q607T2_METCA Length = 1346 Score = 141 bits (356), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 125/440 (28%), Positives = 193/440 (43%), Gaps = 21/440 (4%) Query: 308 IVNYMAVLA--TRQRAVVRRIQRLAYVDPVVHLPNVR--------ALNRALRDAPWSALC 357 +VNY+ V A + + I LAY DP+ LPN R AL A R A+ Sbjct: 886 MVNYIGVAADISSLKEAEEHIHHLAYYDPLSALPNRRYLMERAEYALALAERRKEELAVV 945 Query: 358 YLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQER 417 +L + + + + G + + +++ + + V +L G++ AL L Sbjct: 946 FLDVDHFKDVNDSLGHQVGDELLVRVATQIKEFTRETDTVARLGGDEFALLLPDLGRDAV 1005 Query: 418 ITALDSHL----KQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTN 473 D L K F + IG+S Y + LL N + Sbjct: 1006 SQVADKILAALRKPFEHSGQTFAVTGSIGIS-LYPHDGTDFETLLR---NADTAMYHAKQ 1061 Query: 474 APENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRM 531 N R + ++ ++ +++ L++A+ QP + V E L+R Sbjct: 1062 QGRNQFRFYDPGMNVDILARLTVLSELREAIPAGELRTFFQPEIDLANGTLVGAEALVRW 1121 Query: 532 KGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAE-NRAKMPAHRFAINLSPTSV 590 + L+SPD F+PVA L +I WV+E T + +A+ +A +NL+ Sbjct: 1122 QHPTRGLLSPDQFIPVAESNDLIIAISDWVLEDTCRHLAQWKKADQAPITVGVNLAARHF 1181 Query: 591 CQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGT 650 R V LL +Y + L E+TES L Q I LQ L LGC ++IDDFGT Sbjct: 1182 RDPRLVPRVKSLLCRYGVPGSSLQLELTESTLLDADAQTMIVLQELIALGCSLSIDDFGT 1241 Query: 651 GYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEI 710 GY+S + LKN+ LKID SF+R+I ++ D I ++ L + V+AE VE EE Sbjct: 1242 GYSSLSYLKNLPIATLKIDQSFVRDIAFDADDRTISGTVVALGHSLGLKVIAEGVETEEQ 1301 Query: 711 REAVLSLGIDYMQGYLIGKP 730 R +L G D+ QGYL +P Sbjct: 1302 RRILLEQGCDFGQGYLFSRP 1321 >UniRef50_C0QU11 Diguanylate cyclase/phosphodiesterase n=1 Tax=Persephonella marina EX-H1 RepID=C0QU11_PERMH Length = 688 Score = 141 bits (356), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 105/410 (25%), Positives = 201/410 (49%), Gaps = 28/410 (6%) Query: 332 VDPVVHLPNVRALNRALRDAPWSALCYLRIPGMEMLVKNYGI----MLRIQYKQKLSHWL 387 D + LPN A N + + A + I + + YG + ++ + +S ++ Sbjct: 291 TDELTGLPNRLAFNIDKKISKNPAFILINIDNFKQINDFYGTDTGDFVLVKVGEIISRFI 350 Query: 388 SPLLEPGEDVYQLSGNDLALRL--NTESHQERITALDSHLKQFRFFWDGMPMQPQIGVSY 445 G VY++ +D + + NT++ + L + +++ RF + + + Sbjct: 351 KEKNIKGT-VYRIGADDFGILVEDNTDNVEHITKQLLTRIEKHRFKLADIDLFINVSAGI 409 Query: 446 CYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALE 505 R + L + + + +V N + L +++ + + +++ ++ A+E Sbjct: 410 STERPLFEKADMALKRIKELKKKYLVYNEE--------LDLAKDIGNNLKILSIIKDAIE 461 Query: 506 HNHFFLMAQPITGMRGDV--YHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIE 563 F + QPI ++ + +E+L+R+K +I P+ F+P+A E G I V+E Sbjct: 462 SERIFFVFQPIKSVKDEKIDKYEVLVRIKDREGNIIEPNVFIPIAKESGYYGYITRTVLE 521 Query: 564 HTLQFMAENRAKMPAHRFAINLSPTSVCQ---ARFPVEVSQLLAKYQIEAWQLIFEVTES 620 TL+ + E P +RF+INLS + F E +++ K ++ A +L E+ ES Sbjct: 522 KTLKLIEE----YP-YRFSINLSIEDIMDPDTRDFIYE--KIITKREL-AERLTLEILES 573 Query: 621 NALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNS 680 + N + + ++ ++ G QIAIDDFG+GY++++ + N+ D +KID S I+NI + Sbjct: 574 ESAGNYEDSHEFVKKVKMCGVQIAIDDFGSGYSNFSHVLNLEPDYIKIDASLIKNIDKDI 633 Query: 681 LDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKP 730 +V++I A + +AE+V N+ I E V LG+DY+QGY IGKP Sbjct: 634 YSQVVVSTIITFASKLGIKTIAEFVHNDSIYEIVKDLGVDYVQGYYIGKP 683 >UniRef50_Q5QUC0 Signaling protein with a MHYT sensor domain, PAS, GGDEF and EAL domains n=1 Tax=Idiomarina loihiensis RepID=Q5QUC0_IDILO Length = 829 Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 123/431 (28%), Positives = 195/431 (45%), Gaps = 26/431 (6%) Query: 324 RRIQRLAYVDPVVHLPNVRALNRALRD--------APWSALCYLRIPGMEMLVKNYGIML 375 RI+ LAY D + L N R+L L+D AL I ++L G + Sbjct: 392 ERIRYLAYNDALTGLANRRSLLDHLQDQLATYKEAGQNGALILCDIDKFKILNNTLGSDM 451 Query: 376 RIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLKQFRFFWDGM 435 ++++ L + + +LS N+ A+ L + L + D + Sbjct: 452 GDLLLKRVAERLQSSTKANSFLARLSANEFAVVLTGLERGNSVNIKQQLLTRIYQLLDQL 511 Query: 436 PMQPQIGVSYCYVRSPVNHIYLL-LGELNTVAELSIVTNAPENMQRRGA---MYLQRELK 491 QP SY ++ S L E N ++ A + +R+G ++E Sbjct: 512 -QQPYQLNSYTHLCSFSAGASLFDDSESNAETLMTQSGLALSHSKRKGTGEVSLFRQEFA 570 Query: 492 D----KVAMMNRLQQALEHNHFFLMAQPITGMRGD-VYHEILLRMKGENDELISPDSFLP 546 D +V + +L+ A++ N F L QP + E L+R K + +SP F+P Sbjct: 571 DAVSKRVKLEEQLRNAIKQNEFELYLQPQVNIESKPTGAEALIRWKQSDGRFVSPADFIP 630 Query: 547 VAHEFGLSSSIDMWVIEHTLQFMAE-----NRAKMPAHRFAINLSPTSVCQARFPVEVSQ 601 +A E GL + W+ E Q + + +AKM + +IN+S Q F +V Sbjct: 631 LAEETGLIVPLGYWITERACQILQQWQQSPEKAKM---QLSINVSAKQFQQPEFVEQVQL 687 Query: 602 LLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNV 661 L+ KY+I +L E+TES + ++ ++ L+ LG + A+DDFGTGY+S + L + Sbjct: 688 LVEKYEIRPHRLKLELTESLLMDDISSVTNKIKQLKRLGIEFALDDFGTGYSSLSYLMQI 747 Query: 662 NADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDY 721 D LKID SF+RN++ + QIV +I L K+ +VAE VE EE + L D Sbjct: 748 PFDTLKIDVSFVRNMLDSMEKAQIVYTIIQLGESLKLNIVAEGVETEEQFNYLARLNCDT 807 Query: 722 MQGYLIGKPQP 732 QGYL KP P Sbjct: 808 FQGYLFSKPVP 818 >UniRef50_Q21KC5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21KC5_SACD2 Length = 823 Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 130/471 (27%), Positives = 224/471 (47%), Gaps = 41/471 (8%) Query: 291 YTTQLTIT---SSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPN------- 340 Y T L + S + V ++ + + V T + +++LAY DP+ HLPN Sbjct: 353 YVTPLEVKEGVSGEHQVRGYVGSVLDV--TELKNAQHELEKLAYYDPLTHLPNRRYFKDY 410 Query: 341 -VRALNRALRDAPWSALCYLRIPGMEMLVKNYG-----IMLRI---QYKQKLSHWLSPLL 391 V+ L A + A+ + + + + G I+L + + KQ+L H + Sbjct: 411 LVKQLQLAKEEDSIMAVLLVDLDNFKRINDTLGHDAGDILLSVLAGRIKQRL-HSQDLVA 469 Query: 392 EPGEDVYQLSGNDLALRLNTESHQERI-TALDSHLKQFRFFWDGMPMQPQIGV-SYCYVR 449 G D + L +L+ E +R+ + L S ++ F + + IGV SY Sbjct: 470 RMGGDEFYLVLRNLSSLAEVEKITKRVRSVLASPIRIKNHF---VEITASIGVASY---- 522 Query: 450 SPVNHIYLLLGELNTVAELSIVTNAPENMQRRG--AMYLQRELKDKVAMMNRLQQALEHN 507 P N EL A++++ + R + L +L+DK+ + ++L+QA+ Sbjct: 523 -PEN--CDTPEELMRNADIALYKAKGDGRNRVAYFSAELDSQLRDKMRLESKLRQAVSCE 579 Query: 508 HFFLMAQPITGMRGDVYH--EILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHT 565 F + QP + + E+L+R + + I PD F+ +A E G+ + ID WV+ T Sbjct: 580 AFEIYIQPQYDYKTSKFRWAEVLIRWEDPEEGFIPPDKFIKLAEETGIINDIDQWVLRAT 639 Query: 566 LQFMAENRAKMPA---HRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNA 622 + AE+ + A ++NLS V + +Y I + FE+TES Sbjct: 640 CKLWAEHGEALRAIGIEGVSMNLSARQFYSKTLFAYVEAVFEEYGINPSCISFEITESMV 699 Query: 623 LTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLD 682 + N++ A T++ L+ +G +I+IDDFGTGY+S + LK + D LKID SFI +I ++ D Sbjct: 700 IENIEGAIETMERLRNIGSRISIDDFGTGYSSLSYLKRLPIDSLKIDRSFIMDIPGDTND 759 Query: 683 YQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPL 733 I ++I +A + V+AE +E +E E ++ G +MQGY KP P+ Sbjct: 760 VAITSAIIAMAEKLNLSVIAEGIETKEQCEFLVEQGCFHMQGYYFAKPAPV 810 >UniRef50_B8GN37 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GN37_THISH Length = 803 Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 120/467 (25%), Positives = 228/467 (48%), Gaps = 45/467 (9%) Query: 297 ITSSSYLVFSFIVNYMAVL-----ATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRDA 351 IT SY V N + L T +R ++ LA D + L N + L A Sbjct: 344 ITQISYPVLDNDGNSLGRLWIYEDVTHERQTAEQLLYLAEHDALTGLCNRHCFEQRLEKA 403 Query: 352 PWSA--------LCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGN 403 SA L Y + + + ++G +++ L+P++ G+ + ++ G+ Sbjct: 404 MASAQRHHHRLALLYFDLDEFKAINDSFGHRAGDAVLVRVASELAPVVRGGDMLARVGGD 463 Query: 404 DLALRLNTESHQE------RITALDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYL 457 + AL +S +E R+ + + FRF G+ +G++ +Y Sbjct: 464 EFALLTQIDSIEEARSLAARLCGTVAKIP-FRFRGTGVRSTASVGIA----------VYP 512 Query: 458 LLGEL--NTVAELSIVTNAPENMQRRG-AMYL-QRELKDKVAMM----NRLQQALEHNHF 509 GE + VA I + + + ++Y +R+ + VA +R++ ALE + Sbjct: 513 EHGETTEDLVARADIAMYQAKGLGKNTWSVYDPERDRSEAVAERLSWGDRIRMALEQDLL 572 Query: 510 FLMAQPI-TGMRGDVYH-EILLRMKGEND--ELISPDSFLPVAHEFGLSSSIDMWVIEHT 565 L Q + G++ H E L R++ D ++ P F+P+A + GL ++D V+E Sbjct: 573 LLHYQGVYDAASGELVHMEALARIRDPRDLERILMPGQFVPIAEKTGLILALDRRVLELG 632 Query: 566 LQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTN 625 + +A+N MP A+N+S S + +L+A+++++ +LI E+TE+ A++ Sbjct: 633 IAQLADN-PDMPP--LAVNISGRSFDDPALADAIRELIARHRVDPSRLIIELTETAAVSE 689 Query: 626 VKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQI 685 +++AQ ++ + LGC++ +DDFG G++S+A LK ++ D+LKIDG F+R++ + + Sbjct: 690 IQEAQRFIESMHRLGCKVCLDDFGAGFSSFAYLKYIDVDMLKIDGMFVRDLTRDRENQVF 749 Query: 686 VASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQP 732 V ++ +A+ VAE+VE+ E + +LG+D QGY + +P P Sbjct: 750 VRAMVDVAKGLGKRTVAEFVEDAATLEMLNTLGVDMAQGYHLHRPGP 796 >UniRef50_B0S9W4 Response regulator of a two component complex n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0S9W4_LEPBA Length = 556 Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 118/412 (28%), Positives = 200/412 (48%), Gaps = 37/412 (8%) Query: 339 PNVRALNRALRDAPWS----ALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPG 394 PN +L + L+ S ++ L+I ++K +GI + + +K+ LS L+ Sbjct: 158 PNFESLVKELKGNNLSNTNQSILLLKIVTFPTIIKTFGIEVYRKIFRKVLQLLSVHLQNE 217 Query: 395 EDVYQLSGNDLALRLNTESHQERITALDSH---LKQFRFFWDGMPMQPQI------GVSY 445 V+ L +++A+ L+ S Q + A+ S LK FF DG+ G Sbjct: 218 HKVFHLYSDEIAI-LSNLSEQALVDAVRSFRMILKSDEFFLDGVGFHLDCRYASASGQED 276 Query: 446 CYVRSPVNHIYLLLGEL-NTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQAL 504 CY ++ + L E NT+ +S + + +LQ + ++ A+ Sbjct: 277 CYYKAK---LALFQAEFQNTMDFVSYTEDLSTDH------HLQN-----FQVSQKIHTAI 322 Query: 505 EHNHFFLMAQPITGMRGDVYH--EILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVI 562 + Q I + E L R++ + D +++PD FL +A G I + +I Sbjct: 323 SQKNIIPYFQGILDNQTKEIRKFECLARIR-DRDTILTPDVFLKLAKVTGSIRMIGLQMI 381 Query: 563 EHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNA 622 + ++Q+ + + + F+INL+ + + F V L++Y+I+ ++ FE+ E + Sbjct: 382 DESMQYFSNH-----PYDFSINLTESELEYKSFSKWVESRLSQYKIDPTRVTFEILEDIS 436 Query: 623 LTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLD 682 + K + T++ L+ +GCQIAIDDFG Y++ +RL N D LKIDG FI+N+ N Sbjct: 437 FSEHKHSLSTIKDLKTIGCQIAIDDFGVQYSNLSRLLEFNPDFLKIDGKFIKNLPENKTA 496 Query: 683 YQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLI 734 Y +V I LAR VVAE+V+ I++ V SLGI+Y QGYL KP I Sbjct: 497 YLLVQGIVELARGIGAKVVAEFVDRPAIQDLVESLGIEYSQGYLFMKPSAAI 548 >UniRef50_Q7MQD8 Sensory box/GGDEF family protein n=54 Tax=Vibrionales RepID=Q7MQD8_VIBVY Length = 1048 Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 91/264 (34%), Positives = 144/264 (54%), Gaps = 13/264 (4%) Query: 476 ENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQ---PITGMRGDVYHEILLRMK 532 E +QRR Q+E++ +N + AL ++ L AQ P++ ++ EIL R++ Sbjct: 779 EELQRR-----QQEMES----VNLVHDALANDRLELFAQRIIPLSKECDKMHFEILTRIR 829 Query: 533 GENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFM-AENRAKMPAHRFAINLSPTSVC 591 + E +SP F+P + + ++ ID V+ TL ++ A A R +INLS S+ Sbjct: 830 DKQGEYLSPAIFMPASERYNIAHLIDEQVVTKTLDWLEAHPDALHQLGRCSINLSGHSMG 889 Query: 592 QARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTG 651 F + L I +L E+TE+ A+ NV A ++ LGC IA+DDFG+G Sbjct: 890 NPEFMAFLLDRLTNSVIPCHKLCLEITETAAMKNVALAMDFFAQVKALGCLIALDDFGSG 949 Query: 652 YASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIR 711 +S+ LK + D++KIDG F++++ N D+ +V +I LA+ VAE+VEN EI Sbjct: 950 LSSFGYLKQLPVDVVKIDGIFVQDMHRNESDHIMVRAINELAQQMGKQTVAEFVENSEII 1009 Query: 712 EAVLSLGIDYMQGYLIGKPQPLID 735 + LG+DY QGY+IG P PL + Sbjct: 1010 ALLTELGVDYAQGYVIGYPTPLAE 1033 >UniRef50_A1W268 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Acidovorax sp. JS42 RepID=A1W268_ACISJ Length = 1108 Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 91/274 (33%), Positives = 141/274 (51%), Gaps = 5/274 (1%) Query: 462 LNTVAELSI--VTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQP--IT 517 L + AE+++ V N R A +Q + + + L+ A FL+ QP Sbjct: 815 LASAAEVAMYRVKQDGRNGLRFFAPEMQAHTQRSLELAAGLKDAAHRGELFLVFQPQRTL 874 Query: 518 GMRGDVYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQ-FMAENRAKM 576 G E LLR + L+SP F+P+A + G +ID WV+E Q A + A + Sbjct: 875 GSGALAGAEALLRWRHPRWGLVSPAEFIPIAEQSGSIVAIDFWVVEQVAQQLRAWDAAGL 934 Query: 577 PAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHL 636 P A+N+S + F E+ ++L + I ++ E+TE+ AL N +QA+ T++ L Sbjct: 935 PPLVVAVNVSAAQFARPHFVEELVRILQRMDISPQRIEVELTEAVALKNPEQAETTIRRL 994 Query: 637 QELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMK 696 E+G ++A+DDFGTGY+S + LK D LKID SF+R + + D IV +I +A Sbjct: 995 HEVGFRVALDDFGTGYSSMSYLKRYAIDKLKIDQSFVRELAHQASDQAIVTAIIKMAHSL 1054 Query: 697 KMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKP 730 +M +AE VE E + + G D MQGY +P Sbjct: 1055 RMATIAEGVETAEQAALLQACGCDEMQGYWYSRP 1088 >UniRef50_A4ABI7 Sensory box/GGDEF family protein n=3 Tax=unclassified Gammaproteobacteria RepID=A4ABI7_9GAMM Length = 654 Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 123/442 (27%), Positives = 210/442 (47%), Gaps = 27/442 (6%) Query: 326 IQRLAYVDPVVHLPNVR--------ALNRALRDAPWSALCYLRIPGMEMLVKNYGIMLRI 377 I+R A D + LPN R AL RA R+ +AL +L + + + + G Sbjct: 214 IERQALFDELTGLPNRRLLQDRLGQALARAKRNNTQAALMFLDLDFFKRVNDSLGHSAGD 273 Query: 378 QYKQKLSHWLSPLLEPGEDVYQLSGNDLALRL-NTESHQERITAL----DSHLKQ----- 427 + ++ LS L + +L G++ L L + E E + ++ L+Q Sbjct: 274 ELLVEIGRRLSDFLREADTAARLGGDEFVLLLTDIEGGSEHVVSVVRRRGETLRQAVEAP 333 Query: 428 FRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQ 487 + + + IGVS + N + LL +T + + N R +Q Sbjct: 334 INIKGNEVHITVSIGVSL--LPDDTNDVDDLLKHADTA--MYRAKDDGRNTLRFFVPEMQ 389 Query: 488 RELKDKVAMMNRLQQALEHNHFF-LMAQP-ITGMRGDVYHEILLRMKGENDELISPDSFL 545 L ++ M +L+ AL+ + L QP T E+L+R + E + PD F+ Sbjct: 390 ASLSQRMDMERQLRGALDADEGLELYLQPQYTDEEAICGAELLIRWQYEG-SFVPPDVFI 448 Query: 546 PVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRF--AINLSPTSVCQARFPVEVSQLL 603 PVA + GL + WVIE+ + A + ++ F AIN+SP Q F ++ + + Sbjct: 449 PVAEDSGLIYRLGDWVIENACRIGAGLKDELRDREFSLAINVSPRQFRQKNFSEKIFEAM 508 Query: 604 AKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNA 663 ++++ + E+TE + +V + L+E G + +IDDFGTGY+S LK++ Sbjct: 509 ERHELPRGLIELELTEGLLIEDVDDTVSKMLSLREQGVRFSIDDFGTGYSSLRYLKSLPL 568 Query: 664 DLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQ 723 D LK+D SF+R+++++ D IV +I +AR ++ V+AE VE +E+R+ ++S Q Sbjct: 569 DTLKVDQSFVRDVLTDPGDASIVRAIVSMARTLELEVIAEGVETKEVRDFLISANCLRFQ 628 Query: 724 GYLIGKPQPLIDTLNEIEPIRE 745 GYL +P PL D +E RE Sbjct: 629 GYLYSRPLPLDDFKALLETERE 650 >UniRef50_A4XP68 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Pseudomonas mendocina ymp RepID=A4XP68_PSEMY Length = 1254 Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 122/438 (27%), Positives = 200/438 (45%), Gaps = 29/438 (6%) Query: 315 LATRQRAVVRRIQRLAYVDPVVHLPNVR--------ALNRALRDAPWSALCYLRIPGMEM 366 ++ RQR R I+RLAY D + LPN R A++R R+ AL ++ + + Sbjct: 809 ISERQR-YQREIERLAYSDELTGLPNRRLLLDRLQHAMDRENREGSLGALLFIDLDHFKT 867 Query: 367 LVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDL-----ALRLNTESHQERITAL 421 + + G ++ +++ L+ L + + +L G++ AL ++ E A+ Sbjct: 868 VNDSLGHLIGDALLCEVTTRLARELRTEDTLARLGGDEFVVLLEALGSEPQAVAEHAAAV 927 Query: 422 DSHLK---QFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENM 478 L Q +G + + + +L + +T + +A N Sbjct: 928 GEKLLRGLQGSCLIEGHELAISASIGIALHPLGLQRAADILKQADTA--MYRAKHAGRNA 985 Query: 479 QRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDVYH--EILLRMKGEND 536 A +Q + ++ + L+QA+ L+ QP + D E+LLR Sbjct: 986 LHFFAPEMQAAIDQRLQLQGELRQAIARQQLQLVFQPQLVLADDTVAGAEVLLRWLHPER 1045 Query: 537 ELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFP 596 ISPD F+P+A E GL I WV+E + +A +A+ P A+NLSP + QA Sbjct: 1046 GEISPDQFIPLAEETGLIQDIGQWVLEQSCATLARWQAQWPQLVLAVNLSPRELRQAGCV 1105 Query: 597 VEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYA 656 V L ++ + A L E+TE L +V + +Q L+ G + AIDDFGTGY+S Sbjct: 1106 ARVEDCLRRHGVPAQALELEITEGVLLEDVDRCIGNMQQLKAQGVRFAIDDFGTGYSSLT 1165 Query: 657 RLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEE----IRE 712 LK + D LKID SF+ ++ ++ +V +I +AR + VAE +E +RE Sbjct: 1166 YLKRLPLDRLKIDRSFVADLDGDASGRMLVQTILMIARNLDLECVAEGIEQPSQLALLRE 1225 Query: 713 AVLSLGIDYMQGYLIGKP 730 +LG QGYL GKP Sbjct: 1226 QGCALG----QGYLFGKP 1239 >UniRef50_Q31GA6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31GA6_THICR Length = 815 Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 121/440 (27%), Positives = 200/440 (45%), Gaps = 29/440 (6%) Query: 317 TRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL--------RDAPWSALCYLRIPGMEMLV 368 T ++ IQ LA+ DP+ LPN R L L R AL ++ + + L Sbjct: 373 TERKKAEEAIQNLAFYDPLTQLPNRRLLQDRLQQEMAVTERSKHVCALMFIDLDDFKTLN 432 Query: 369 KNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHL--- 425 G + ++++ L + + V ++ G++ L L + + A + L Sbjct: 433 DTLGHDTGDKLLRQVATRLRENVREFDTVARIGGDEFVLILPSLDDDWKDAATHAELVAQ 492 Query: 426 KQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTN--------APEN 477 K R +P + S Y +P + L G T+ EL + N Sbjct: 493 KVLRVL-----NKPYLLDSTPYHSTPSIGVKLFSGHQETLEELLKHADLAMYQAKAKGRN 547 Query: 478 MQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDVYH-EILLRMKGEND 536 R +Q + K M ++QA+ F L QP G + E L+R + Sbjct: 548 TVRFYDTTMQEVVNAKSVMEASMRQAITGQQFVLFYQPQINSNGQIIGAEALVRWRHPQK 607 Query: 537 ELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAH---RFAINLSPTSVCQA 593 LI+P+ F+P+A E G SI WV++ + + E A+ PA A+N+S Q Sbjct: 608 GLIAPNKFIPLAEENGFILSIGRWVLQTACEQLVE-WARQPATAQITMAVNVSARQFHQI 666 Query: 594 RFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYA 653 EV +++ + L E+TES + +++ +Q L++LG ++DDFGTGY+ Sbjct: 667 DLVEEVERIICQTGANPQLLKLELTESLLVKDIEDVVDKMQALKKLGVSFSLDDFGTGYS 726 Query: 654 SYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREA 713 S A LK + D LKID +F+R+I+ +S D I ++ LA+ + V+AE VEN E + Sbjct: 727 SLAYLKRLPLDQLKIDQTFVRDIIDDSNDAAIARAVIALAKSMEFNVIAEGVENIEQHQM 786 Query: 714 VLSLGIDYMQGYLIGKPQPL 733 ++ +G QGYL G+P P+ Sbjct: 787 LIDMGCRVFQGYLFGRPVPI 806 >UniRef50_B5JWR5 Sensory box/ggdef domain/eal domain protein n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JWR5_9GAMM Length = 728 Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 85/251 (33%), Positives = 136/251 (54%), Gaps = 5/251 (1%) Query: 482 GAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDV--YHEILLRMKGENDELI 539 G M Q+ L+D +L AL+ + F L QPI ++ Y+E+LLRM+GE ELI Sbjct: 467 GQMQKQQLLEDS-GWSKKLAAALKDDRFVLHYQPILDLKSQQVRYYEVLLRMQGEPGELI 525 Query: 540 SPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEV 599 PD+FL A FG S + WVIEH L +A K +INLS ++ +F + Sbjct: 526 PPDAFLGAADRFGFSVEVARWVIEHALSTVAHQPNKTAG--LSINLSAKALEDTQFIDWL 583 Query: 600 SQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLK 659 L+ + +IE +L FEV E L + ++A + L+ L LGC I +D F G ++ +L+ Sbjct: 584 GSLIKETEIEPSRLAFEVEEQALLNSRQEALLGLKALSGLGCVIIMDGFCAGLSASGKLQ 643 Query: 660 NVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGI 719 N+ D LKI + ++++ ++ +V++I LAR+ +A +V++E V +G+ Sbjct: 644 NIPFDGLKIQRELVTGLLASDVNKTLVSAIAELARVMGKFTIAGFVQDELTLSLVKEMGV 703 Query: 720 DYMQGYLIGKP 730 D QGY + P Sbjct: 704 DCAQGYFLATP 714 >UniRef50_C7R6X9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R6X9_KANKD Length = 855 Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 85/253 (33%), Positives = 137/253 (54%), Gaps = 3/253 (1%) Query: 486 LQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRG--DVYHEILLRMKGENDELISPDS 543 L + + + + + L+ A+E N L QP+ V E L+R + LI P Sbjct: 595 LSEGMHENLMLESALRMAVERNELVLHYQPLVSFNDFTVVGVEALIRWQHPIQGLIPPYK 654 Query: 544 FLPVAHEFGLSSSIDMWVIEHTLQFMAE-NRAKMPAHRFAINLSPTSVCQARFPVEVSQL 602 F+P+A E G+ I +WV+ + M E ++A + R ++N+S + P +V + Sbjct: 655 FIPLAEETGIIGDIGLWVLREACRQMVEWDKAGLNVARASVNISVQQIETGLLPKQVESV 714 Query: 603 LAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVN 662 L + + A +L E+TES + + +QA + + Q++G ++A+DDFGTGY+S A LK + Sbjct: 715 LKETGLAAERLYLELTESTIMQDPQQASLAMTEFQKMGVKLAVDDFGTGYSSMAYLKRLP 774 Query: 663 ADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYM 722 D LKID SFI++I +++ D I +I LA+ + VAE VE E E + LG D Sbjct: 775 LDRLKIDRSFIKDIGADTNDEVICKAIVQLAKSLGLETVAEGVEEESQAEFLKGLGCDVA 834 Query: 723 QGYLIGKPQPLID 735 QGYL KP P ++ Sbjct: 835 QGYLYSKPVPALE 847 >UniRef50_Q1NJA1 PAS:GGDEF:EAL n=7 Tax=delta proteobacterium MLMS-1 RepID=Q1NJA1_9DELT Length = 941 Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 123/441 (27%), Positives = 201/441 (45%), Gaps = 33/441 (7%) Query: 317 TRQRAVVRRIQRLAYVDPVVHLPNVR--------ALNRALRDAPWSALCYLRIPGMEMLV 368 T ++ + I RLA+ DP+ LPN R A + + R A+ +L + + L Sbjct: 488 TDKKNREQEIHRLAFYDPLTRLPNRRLFFDRLEQAFSASARSGQHGAVLFLDLDNFKTLN 547 Query: 369 KNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQER--ITALDSHLK 426 G + + L + + + + G++ + LN S + I+ + Sbjct: 548 DTRGHDVGDLLLTMAAERLQEAVRANDTISRQGGDEFMVLLNNLSPERHAAISQAGRVAE 607 Query: 427 QFR------FFWDGMPMQPQIGVS-----YCYVRSPVNHIYLLLGELNTVAELSIVTNAP 475 + R F DG + IGVS + +P + ++ A + +A Sbjct: 608 KIRAALDQPFDLDGY--EHHIGVSIGLSLFLGHDTPADELFK-----RADAAMYQAKHAG 660 Query: 476 ENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDVYH-EILLRMKGE 534 N R +Q EL+ A++ L+QA+ F L QP T G + E LLR + Sbjct: 661 RNQVRFFDPEMQAELEQASALVVDLRQAIWQGQFQLHYQPQTANDGRIIGAEALLRWRHP 720 Query: 535 NDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAH---RFAINLSPTSVC 591 +SP F+P+A E L +I WV+E +A A +PA + A+N+S Sbjct: 721 ERGPVSPMQFIPLAEESNLILAIGRWVLEEACGQLAA-WADLPAAGNCKLAVNVSARQFR 779 Query: 592 QARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTG 651 Q F E+ ++LA + L E+TES +T + +Q L++LG ++DDFGTG Sbjct: 780 QPEFVAEIRRILAATGADPKLLKLELTESIVMTELADTVSKMQELRDLGIGFSMDDFGTG 839 Query: 652 YASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIR 711 Y+S A+LK + + LKID +F+R++ S+ D IV +I + R + V+AE VE +E Sbjct: 840 YSSLAQLKRLPLEQLKIDRAFVRDLGSDPHDDAIVETIIAMGRTLDIQVIAEGVETKEQL 899 Query: 712 EAVLSLGIDYMQGYLIGKPQP 732 + G D QGYL +P P Sbjct: 900 ATLARYGCDAYQGYLFSRPVP 920 >UniRef50_C8QYF1 Diguanylate cyclase/phosphodiesterase n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QYF1_9DELT Length = 711 Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 97/351 (27%), Positives = 168/351 (47%), Gaps = 26/351 (7%) Query: 392 EPGEDVYQLSGNDLALRLNTESH--------QERITALDSHLKQFRFFWDGMPMQPQIGV 443 +P Y+L G+D L L+ Q+ + A+D Q F + P++ + + Sbjct: 374 QPWGRCYRLGGDDFGLLLDEADTTVQPQSLAQQVLAAVD----QSEFNYRDQPIRINVSI 429 Query: 444 SYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQA 503 +R + L L E+ + S + E + LQ + D + ++ ++A Sbjct: 430 GISRLRPLLETADLALNEVKKLRRGSFLIYQEE-------LNLQERIADNLQVLENARRA 482 Query: 504 LEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWV 561 L ++ + QPI R V E L+R++ + +++SP FL V E L + Sbjct: 483 LSNDDVLVYYQPIVDNRTGKIVKFESLVRLRNPDGQVLSPVMFLDVVKESSLYPEFTRRM 542 Query: 562 IEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESN 621 ++ T +A+ R + F++NLS + + + + + A +L FE+ ES Sbjct: 543 VDKTFADLADCR-----YGFSLNLSIADIVEQEVQDFIMAKIKAHPEIARRLTFEILESE 597 Query: 622 ALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSL 681 + N+ Q ++ ++ GCQIAIDDFG+GY+++A + D +KID + IRNI + Sbjct: 598 GVENIALVQSFIERVKAAGCQIAIDDFGSGYSNFAHILQFKVDSIKIDATLIRNIHQDQQ 657 Query: 682 DYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQP 732 +V +I R + VAE+V +EE+ + V LGIDY QGY +GKP P Sbjct: 658 AQVLVRTIVDFCRQLGINTVAEFVHSEEVLQVVKELGIDYSQGYFLGKPAP 708 >UniRef50_B8G9I9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Chloroflexus RepID=B8G9I9_CHLAD Length = 1101 Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 128/437 (29%), Positives = 211/437 (48%), Gaps = 58/437 (13%) Query: 333 DPVVHLPNVRALNR----ALRDAPWS----ALCYLRIPGMEMLVKNYGIMLRIQYKQKLS 384 D + LPN L ALRDA AL ++ + G + + + G + ++ + +S Sbjct: 667 DTLTGLPNRNLLQERIDLALRDARERRHIVALLFIDLDGFKQVNDSLGHPIGDRFLKHVS 726 Query: 385 HWLSPLLEPGEDVYQLSGNDLAL--------RLNTESHQERITALDSHLKQFRFFWDGMP 436 + P + + ++ G++ L RL + Q + AL Q F DG Sbjct: 727 QAFAACARPQDTLGRMGGDEFLLLMPDLPDARLADIAAQRLLDAL-----QTPFLHDGHE 781 Query: 437 MQ--PQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQ----REL 490 ++ IG+S + R V+ + LL + + + + ++R G ++ + R Sbjct: 782 LRLTASIGIS-LFPRDGVDVVTLLKNADSAM-------HRAKELKRSGFLHYRPEHSRRA 833 Query: 491 KDKVAMMNRLQQALEHNHFFLMAQP--------ITGMRGDVYHEILLRMKGENDELISPD 542 ++A+ +L++ALE + + QP ITG+ E L+R I+P Sbjct: 834 HTRLALEAQLRRALERHELAVYYQPQYDLVSEGITGV------EALVRWHHPQRGPIAPG 887 Query: 543 SFLPVAHEFGLSSSIDMWVI-EHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQ 601 F+P+A E L I WV+ E Q MA +A P R ++N+S + + F EV+ Sbjct: 888 EFVPIAEESDLIIEIGSWVLREACRQAMAWQQAGYPLLRISVNVSARQLLRPEFVAEVAA 947 Query: 602 LLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNV 661 +L + A L E+TE L + A + L+ +G +IA+DDFGTGY+S A L+ + Sbjct: 948 VLHATGLPAQYLELEITEGVMLDDPIYAARQIDQLRHMGVRIALDDFGTGYSSLAYLRQL 1007 Query: 662 NADLLKIDGSFIR------NIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVL 715 D LKID +F+R N+V+NS ++ +I +LA + VVAE VE +E R A+L Sbjct: 1008 RLDALKIDQAFVRAIDEQQNVVTNS--RALLRAIINLAHSLGLAVVAEGVETDEQRAALL 1065 Query: 716 SLGIDYMQGYLIGKPQP 732 S+G D +QGYLI +P P Sbjct: 1066 SMGCDVLQGYLISQPLP 1082 >UniRef50_B4RUS1 Putative diguanylate cyclase/phosphodiesterase domain 2 (EAL) n=2 Tax=Alteromonas macleodii RepID=B4RUS1_ALTMD Length = 630 Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 120/458 (26%), Positives = 209/458 (45%), Gaps = 32/458 (6%) Query: 300 SSYLVFSFIVNYMAVLATRQRAVVR------RIQRLAYVDPVVHLPN----VRALNRALR 349 + + VF + + ++A+ R + IQ LA+ DP+ +LPN R N LR Sbjct: 163 TGFSVFVLVQDIRRLMASLHREYTKVEQNRAHIQHLAHHDPLTNLPNRVMGERLFNEKLR 222 Query: 350 DAPWS----ALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGND- 404 ++ S A+ ++ + + + G ++ QK+S ++ L E + + G++ Sbjct: 223 ESEESGLQLAVLFIDLDNFKPVNDALGHAAGDRFLQKISQTITDNLSANECLIRFGGDEF 282 Query: 405 --LALRLNTESHQERITA--LDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLG 460 LA ++ T S E + + +F + + IGV+ ++P + + Sbjct: 283 IVLAAQIKTRSQIENLCQNLIQWCSSEFEVLQTKIVVSGSIGVA----QAPYDGVKF--K 336 Query: 461 ELNTVAELSIVTNAPENMQRRGAMY---LQRELKDKVAMMNRLQQALEHNHFFLMAQPIT 517 +L A++++ A N + R Y E +K +++ RL+ A++ N + QP+ Sbjct: 337 QLCRKADIAMY-EAKRNGRNRFEFYDVRFDEESDEKFSLIQRLRPAVQANALAVYYQPLI 395 Query: 518 GMR-GDVYH-EILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAK 575 ++ G++ E LLR E+ +I PD F+P+A GL ++ WV+ F A+ + Sbjct: 396 DLKTGNICALEALLRWPQEDGSMIFPDRFIPLAESSGLIDTLGAWVLNQACMFCAKQQQN 455 Query: 576 MPAH-RFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQ 634 + A+NLS P V L Q+ L E+TES + L+ Sbjct: 456 GNSELSIAVNLSFAQFKDGNLPQIVKGALETSQLAPEHLELELTESILADDNGNVIQQLE 515 Query: 635 HLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLAR 694 ++ LG AIDDFGTGY++ L+ +A LKID FI + + D +V +I +A Sbjct: 516 QIKSLGVTFAIDDFGTGYSNLNYLRTFSAQKLKIDRIFINTLGFDEKDVPLVTAIISIAE 575 Query: 695 MKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQP 732 M VAE +ENE + + +G D QGY KP P Sbjct: 576 SLGMATVAEGIENEAALKKITEMGCDIGQGYYWSKPVP 613 >UniRef50_Q12MP7 GGDEF domain n=1 Tax=Shewanella denitrificans OS217 RepID=Q12MP7_SHEDO Length = 855 Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 113/410 (27%), Positives = 202/410 (49%), Gaps = 37/410 (9%) Query: 344 LNRALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGN 403 L R RD A+C+L + + + +G + ++ L+ L L + + + G+ Sbjct: 446 LKRCARDGRQLAVCFLDVDNFKDINDTFGHAIGDEFIALLATNLKNKLRQTDVIARFGGD 505 Query: 404 DLALRLNTESHQERITALDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPVN-HIYLLLGEL 462 + + E+ Q+ ++++Q + + S + + V+ I + + Sbjct: 506 EFIIFFEIEAEQQSAEQSITNIRQL--------VSGEFITSQAVINASVSLGIAIYPNDG 557 Query: 463 NTVAELSIVTNAPENM---QRRG----AMYLQ---RELKDKVAMMNRLQQALEHNHFFLM 512 T AEL + NA M +++G A Y Q ++ +++++ ++QAL N F + Sbjct: 558 LTSAEL--IKNADTAMYHAKKQGVGSFAYYRQALTEQVVRRISIVEDIKQALLLNQFEMW 615 Query: 513 AQP--------ITGMRGDVYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEH 564 QP I+G E L+R + LI+P F+P+A E GL + +D WV+ Sbjct: 616 YQPQIDVITEEISGA------EALIRWQHPTKGLINPIDFIPLAEELGLIAEVDRWVMNS 669 Query: 565 TL-QFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNAL 623 Q + K+ R A+N+S + Q++F ++ +++YQI+ + E+TE A Sbjct: 670 VFNQVFKWHEKKLFFGRVALNVSTKTFKQSKFRQHYAEAISQYQIDPSHIEIEITEG-AF 728 Query: 624 TNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDY 683 ++ + LQ LQ LG IAIDDFGTGY+S +RL+++ + LKID SFI I + Sbjct: 729 SDEEDISPFLQELQSLGYGIAIDDFGTGYSSLSRLRSIPVNRLKIDRSFIDPITDSLAAK 788 Query: 684 QIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPL 733 +V SI +LA + V+AE +E ++ + LG ++MQGY I +P P+ Sbjct: 789 ALVKSIINLAHSLDLCVIAEGIETQQHLTILKELGCNHMQGYYISRPLPV 838 >UniRef50_A8ET73 EAL/GGDEF/PAS domain protein n=1 Tax=Arcobacter butzleri RM4018 RepID=A8ET73_ARCB4 Length = 826 Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 110/427 (25%), Positives = 207/427 (48%), Gaps = 22/427 (5%) Query: 324 RRIQRLAYVDPVVHLPNVRAL--------NRALRDAPWSALCYLRIPGMEMLVKNYGIML 375 +++ LAY D + LPN R+L + ++ AL ++ + G +++ G Sbjct: 406 EKVEFLAYHDSLTMLPNRRSLQIKVEKIIEDSFKNNKKFALLFIDLDGFKVINDVLGHDT 465 Query: 376 RIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLKQFRFFWDGM 435 + +++S + + V+++ G++ A+ E+ I +K Sbjct: 466 GDKLLKEVSLRFKNIFDGNSLVFRIGGDEFAIIFEYENDDLIILNAQYIIKNLNETIVIG 525 Query: 436 PMQPQIGVSYCYVRSPVNHIYL--LLGELNTVAELSIVTNAPENMQRRGAMY---LQREL 490 IG S R P++ L LL +T + A + + R Y L + + Sbjct: 526 NNSLHIGCSIGIARYPLDGDDLVSLLKYSDTA-----MYKAKQKSKNRYEFYTEDLTKTV 580 Query: 491 KDKVAMMNRLQQALEHNHFFLMAQPITGMR-GDVYH-EILLRMKGENDELISPDSFLPVA 548 ++ + L +ALE+ F+L+ QP ++ +++ E LLR K +SPD F+ +A Sbjct: 581 SSRLKIEQALSKALENEEFYLVYQPKYNLKTKEIFSVETLLRWKNPILGNVSPDEFIYIA 640 Query: 549 HEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQI 608 E GL + +V + + + + K+ IN+S + ++ F E+ ++L + I Sbjct: 641 EEIGLIHELGFFVFKKACEDFVKLQNKINIQMITINVSTLQLVRSNFIDEIKKILIQTNI 700 Query: 609 EAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKI 668 + + E+TE+ + N+K + +L LQ LG +I IDDFGTGY+S L+ + D++KI Sbjct: 701 DTINIGIEITETYFIENMKDTEKSLNELQNLGFKILIDDFGTGYSSLQYLQKLPIDIIKI 760 Query: 669 DGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIG 728 D SF+ ++ N + I+ +I L++ VAE +E +E + ++ LG+D+ QGYL Sbjct: 761 DKSFVSSLDDN--NDSIIRAIVALSKSFNYTTVAEGIETKEQEDKLIELGVDFGQGYLFS 818 Query: 729 KPQPLID 735 KP+ LI+ Sbjct: 819 KPKLLIE 825 >UniRef50_C6D8Q9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D8Q9_PAESJ Length = 633 Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 132/471 (28%), Positives = 223/471 (47%), Gaps = 47/471 (9%) Query: 290 GYTTQLTITSSSYLVFSFIVNYMAV---LATRQRAVVRRIQRLAYVDPVVHLPNV----- 341 G+ +L I SS + ++ + V L+ R+R + RI+ +AY D + LPN Sbjct: 164 GFPLELQIISSPMMREDEVIGTVIVSQDLSDRKRNI-ERIRYMAYYDDMTGLPNRTLFHI 222 Query: 342 ---RALNRALRDAPWSALCYLRIPGMEML----VKNYGIMLRIQYKQKLSHWLSPLLEPG 394 +L A LCYL + +++ + +G ML +Q ++L+ + G Sbjct: 223 RMNESLAFAREHDRMIGLCYLDLDRFKLVNASFGREFGDMLLLQVAERLTRAI------G 276 Query: 395 ED--VYQLSGNDLALRLNTESHQERITALDS---HLKQFRFFWDGMPMQ--PQIGVSYCY 447 E V ++ G++ AL L +E++ L H F G P+ +G Sbjct: 277 EQGIVARMEGDEFALLLQDIESEEQLMELSRGMLHAIDEPFELKGFPLHITGSLGAVTSL 336 Query: 448 VRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQ---RELKDKVAMMNRLQQAL 504 V+ + Y LL + A++++V E+ + +Y + +++ + + + +A+ Sbjct: 337 VKE--DDGYSLLKK----ADIALV-KVKESGKNDCMLYSESWSNSSFERLTLQHEMYRAI 389 Query: 505 EHNHFFLMAQP----ITGMRGDVYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMW 560 + F L+ QP ++GM V E L+R + +I P F+P+A E G+ I W Sbjct: 390 QRKEFILLYQPQYDLVSGMMVGV--EALVRWRHPAKGMIPPGEFIPIAEESGMIVQIGDW 447 Query: 561 VIEHTL-QFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTE 619 V+E Q A A +P ++NLS Q +V+ +L K ++ L E+TE Sbjct: 448 VLEEACRQNKAWQDAGLPPMPVSVNLSIRQFVQQDLASKVASVLEKTGLKPEYLDLEITE 507 Query: 620 SNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSN 679 S + ++ L+ L ++G I++DDFGTGY+S+ LKN D LKID SF+R+I + Sbjct: 508 SMTMDTGHVSRCLLE-LTDMGVGISVDDFGTGYSSFHYLKNFPIDRLKIDRSFVRDIQQD 566 Query: 680 SLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKP 730 D +IVA+I +A + V+AE VEN E E + D MQGY P Sbjct: 567 PSDAEIVAAIIAMAHNLNIQVIAEGVENAEQMEFLRKHNCDEMQGYFWSPP 617 >UniRef50_A3YI96 Sensory box/GGDEF family protein n=1 Tax=Marinomonas sp. MED121 RepID=A3YI96_9GAMM Length = 806 Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 113/435 (25%), Positives = 206/435 (47%), Gaps = 24/435 (5%) Query: 317 TRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRDA--------PWSALCYLRIPGMEMLV 368 + ++ +I LAY D + HLPN + L + A+ +L + + + Sbjct: 353 SARKEAEDKINHLAYFDSLTHLPNRHWIMERLESSMEISRERKVKGAVLFLDLDRFKNIN 412 Query: 369 KNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLA-----LRLNTESHQERITALDS 423 + G + Q +++ L E V +L G++ L + + E++ Sbjct: 413 DSLGHDVGDLLLQVVANDFKVLAEGDICVARLGGDEFVFLFPFLEGDLDYINEKVAFFAQ 472 Query: 424 HLKQF---RFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQR 480 + Q F M + + ++ +LL + +T L +A N R Sbjct: 473 QIVQSFNKSKFVGSHEMHISVSIGITLFDGFEENVGVLLKQADTA--LYKAKDAGRNTYR 530 Query: 481 RGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDVYH-EILLRMKGENDELI 539 +Q D++ + L +A+ HN F L QP ++G++ E L+R ++ I Sbjct: 531 FYKAEMQVLTDDRLKLEKALHRAITHNEFELYYQPQNNVKGELLGAEALIRWHDGDNGFI 590 Query: 540 SPDSFLPVAHEFGLSSSIDMWVIEHTL----QFMAENRAKMPAHRFAINLSPTSVCQARF 595 P F+P+A E GL + WV+E+ Q++ + K P +IN+SP F Sbjct: 591 PPAQFIPLAEEIGLIIELGEWVMENAFYQLSQWLKRDLWK-PDWTLSINVSPIQFQHPEF 649 Query: 596 PVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASY 655 + + +LL KY I A + E+TE+ LT+++ +++ ++H++ LG +++IDDFGTGY+S Sbjct: 650 LINLERLLLKYNIPATLIDIEITENMLLTDLQASRLKMEHIRSLGMKLSIDDFGTGYSSL 709 Query: 656 ARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVL 715 LK + + LKID SF+R+++ +S D IV ++ ++ + V+AE VE +E + Sbjct: 710 QYLKTLPIERLKIDQSFVRDLLIDSGDEAIVGAVIAMSGALDIEVLAEGVETQEHLLRLE 769 Query: 716 SLGIDYMQGYLIGKP 730 +G QGYL G+P Sbjct: 770 EMGCLNYQGYLFGRP 784 >UniRef50_Q0A5U6 Periplasmic sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A5U6_ALHEH Length = 802 Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 91/265 (34%), Positives = 138/265 (52%), Gaps = 10/265 (3%) Query: 491 KDKVAMMNRLQQALEHNHFFLMAQP----ITGMRGDVYHEILLRMKGENDELISPDSFLP 546 +++ RL++ALE +H + QP TG V E L+R + LI PD F+P Sbjct: 540 SERLETETRLRRALELDHLEVFYQPQLDITTGALTGV--EALVRWRDPEQGLIPPDRFIP 597 Query: 547 VAHEFGLSSSIDMWVIEHT-LQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAK 605 VA E GL + V+E LQ A +R +PA A+NLS + R ++ L + Sbjct: 598 VAEETGLIDRLGQQVLERACLQVAAWDRDGLPALDVAVNLSAHQIGDPRLCAKIRHALER 657 Query: 606 YQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADL 665 + +L+ E+TES +T + A TL L+ LG Q+AIDDFGTGY+S A LK D Sbjct: 658 SGLAPRRLVLEITESTLMTQAEGALGTLAGLKGLGVQVAIDDFGTGYSSLAYLKRFAIDW 717 Query: 666 LKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGY 725 LK+D F++++ + D ++ +I ++A + V+AE VE + + + LG D QG+ Sbjct: 718 LKVDRCFVQDLPEDRNDAELTQTIVYMAHNLGLRVLAEGVETQAQLDFLTHLGCDGWQGF 777 Query: 726 LIGKPQP---LIDTLNEIEPIRESA 747 L P P L+ L E +R A Sbjct: 778 LCSPPLPPQELVARLESREGLRRRA 802 >UniRef50_A4Y0E0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=23 Tax=Pseudomonas RepID=A4Y0E0_PSEMY Length = 766 Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 125/454 (27%), Positives = 215/454 (47%), Gaps = 42/454 (9%) Query: 308 IVNYMAVLA--TRQRAVVRRIQRLAYVDPVVHLPN--------VRALNRALRDAPWSALC 357 I +Y+AV + T + R + LA+ DP+ +LPN AL R+ + A+ Sbjct: 305 ISHYVAVFSDITALKRSQRELDYLAHHDPLSNLPNRLLFTERIAHALERSKSEQLRGAVL 364 Query: 358 YLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQER 417 + + + + ++ G + + + L L G + +L G++ L T + + Sbjct: 365 LIDLDHFKHINESLGHNVGDLLLKSVGERLQQDLPGGCTLARLGGDEFGLLSETCADAPQ 424 Query: 418 ITALDSHLKQ-----FRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVT 472 L +L + FR + + IG+S L + ++V + ++ Sbjct: 425 AAELAQNLLRCLEAPFRLDEHELYIGASIGIS------------LFPDDADSVEQ--VLR 470 Query: 473 NAP------ENMQRRGAMYLQRELKD----KVAMMNRLQQALEHNHFFLMAQPITGMRGD 522 NA ++ R G + +EL D +V + + L+ AL+++ + QP+ + Sbjct: 471 NADSALFKAKSSGREGYAFYVQELTDYARQRVELASSLRHALDNHELRVFYQPLHDLENG 530 Query: 523 --VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHR 580 V E L+R + LI P F+P+A + G+ ID WV+E M A+ A R Sbjct: 531 NPVGMEALVRWQHPQRGLIPPAEFIPIAEDNGMIGPIDAWVLEQACGQMMRWNAEGSALR 590 Query: 581 F-AINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQEL 639 F A+N+S + ++V+Q+LA+ + QL EVTES + + A L L+ L Sbjct: 591 FVAVNVSSRLFSRGELDLKVAQVLAETGLSPQQLELEVTESAIMEDPDAALSLLTRLRAL 650 Query: 640 GCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKML 699 G ++AIDDFGTGY+S ARLK + D LK+D SF+R + + D I ++ L + Sbjct: 651 GVRLAIDDFGTGYSSLARLKRLPVDKLKLDQSFVRGLPDDIEDAAIARAVIALGHSLGLN 710 Query: 700 VVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPL 733 V+AE +E+ + + +LG DY QGY G+P P+ Sbjct: 711 VLAEGIESPAQVDFLRALGCDYGQGYHFGRPAPV 744 >UniRef50_B9LZ98 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. FRC-32 RepID=B9LZ98_GEOSF Length = 912 Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 119/439 (27%), Positives = 205/439 (46%), Gaps = 34/439 (7%) Query: 317 TRQRAVVRRIQRLAYVDPVVHLPNVRALN--------RALRDAPWSALCYLRIPGMEMLV 368 T ++ IQ+LAY D + LPN L +A+RD A+ +L + + + Sbjct: 469 TDRKKAEDEIQQLAYYDTLTGLPNRSLLQDRLGQGIVQAVRDNRKVAIMFLDLDRFKSIN 528 Query: 369 KNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHL--- 425 G + ++ L+ + + V ++ G++ + ++ H E + + + Sbjct: 529 DTLGHVAGDSLLATVAERLTECVRETDTVARIGGDEFVIIISAIEHAEDLNKIAEKILAA 588 Query: 426 --KQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGA 483 K + + IG++ Y + LL A+L++ ++ + Sbjct: 589 ISKPLVLNDQEIFITASIGIA-IYPEDGTDVQGLLKN-----ADLAMYK--AKDQGKNAF 640 Query: 484 MYLQRELK----DKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDE 537 Y RE+ + + + N L++ALE N F + QP ++ V E L+R + + Sbjct: 641 QYFSREMNVQALEHLILENSLRRALERNEFVIFYQPQMDLKSGRLVGMEALIRWQHPDLG 700 Query: 538 LISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAH----RFAINLSPTSVCQA 593 L+ P F+P+A E GL I W ++ A+NRA M A R A+NL Q Sbjct: 701 LLPPSRFIPMAEETGLILPIGEWALQTAC---AKNRAWMDAGFMPLRVAVNLCGIQFRQK 757 Query: 594 RFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYA 653 +F + +L K + QL E+TES ++ +++ L L+E+G +AIDDFGTGY+ Sbjct: 758 KFIELIEAVLKKTGLAPSQLELELTESMLMSKAEESTTVLHKLKEMGVSLAIDDFGTGYS 817 Query: 654 SYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREA 713 S + LKN + +KID SFIR++ +N D IV++I +A + V AE VEN E Sbjct: 818 SLSYLKNFPINRVKIDRSFIRDVPNNPDDTAIVSAIIAMAHNLNLKVTAEGVENHSQLEF 877 Query: 714 VLSLGIDYMQGYLIGKPQP 732 + + + +QGYL+ P P Sbjct: 878 LSTRNCNEIQGYLLSSPLP 896 >UniRef50_C6WTL1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WTL1_METML Length = 976 Score = 139 bits (350), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 131/471 (27%), Positives = 212/471 (45%), Gaps = 39/471 (8%) Query: 287 IYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVR---- 342 IYP + T + + +++ + + + A RI+ LA+ DP+ +LPN R Sbjct: 495 IYPEHLTITAVKDADGQTTNYVGMFTDISVAK--AASERIENLAFFDPLTNLPNRRLFSD 552 Query: 343 ----ALNRALRDAPWSALCYLRIPGM----EMLVKNYGIMLRIQYKQKLSHWLSPLLEPG 394 AL + R + AL +L + + L +YG ML Q +LS+ + G Sbjct: 553 RLTQALVNSTRSGNYGALVFLDLDHFKSLNDTLGHDYGDMLLKQVALRLSN----CVREG 608 Query: 395 EDVYQLSGNDLALRLNTESHQERITALD-SHLKQFRFFWDGMPM---QPQIGVSYCYVRS 450 + V +L G++ L + E ++A D Q D + M QP S+ Y+ + Sbjct: 609 DSVARLGGDEFVLLV------ENLSANDVEAAHQIEAIGDKILMSLNQPYQLQSHEYLST 662 Query: 451 PVNHIYLLLGELNTVAEL--------SIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQ 502 P I L G + +L A N R +Q + +V + L++ Sbjct: 663 PSIGISLFNGHQESSEDLLKHADIAMYQAKKAGRNTLRFFDPLMQETINMRVDLERELKK 722 Query: 503 ALEHNHFFLMAQPITGMRGD-VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWV 561 A+E F L Q G E L+R + +ISP F+PVA E GL + I WV Sbjct: 723 AIEQKQFELYYQVQMNSAGQPSGAEALIRWRHPERGIISPIQFIPVAEETGLITQIGEWV 782 Query: 562 IEHT-LQFMAENRAKMPAH-RFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTE 619 + LQ A + AIN+S Q F +V + + I+ +L E+TE Sbjct: 783 LNQACLQLQAWQLDQASKDFSLAINVSAKQFLQPDFANQVKNSIRSFHIDNTKLKLELTE 842 Query: 620 SNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSN 679 S + N++ T+ L E+G Q ++DDFGTGY+S LK + LKID SF+R++ ++ Sbjct: 843 SMLIDNIEYVIHTMNTLGEIGIQFSLDDFGTGYSSLQYLKMLPLSQLKIDQSFVRDLATD 902 Query: 680 SLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKP 730 + + IV +I +A + V+AE VE +E + + + G QGY +P Sbjct: 903 NSNKTIVLTIITMAHSLGLNVIAEGVETDEQLQLLNAHGCGNYQGYYFSEP 953 >UniRef50_B9Z1R5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z1R5_9NEIS Length = 1086 Score = 139 bits (350), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 142/515 (27%), Positives = 233/515 (45%), Gaps = 43/515 (8%) Query: 238 STIFSTNYTLSLLLPLMMWGAMRYGYKLISLLWAVVLMISIHSYQNYIPIYPGYTTQLTI 297 S IF N + S+ M+ G R+G+ W ++ S++ Y +L+I Sbjct: 570 SRIFRDNTSWSVA---MLDGLARHGH------WQGEMLDRRRSHE-------WYPAELSI 613 Query: 298 TSSSYLVFSFIVNYMAVLA--TRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRD----- 350 ++ + I NY+ V A T ++ R+Q LA DP+ LPN L L D Sbjct: 614 SAVRDDAGA-ITNYVGVFADITVRKQAEERLQFLANHDPLTRLPNRSWLIACLEDRIQQI 672 Query: 351 ---APWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLAL 407 A+ +L + +++ ++G + ++ + L ++ + +L G++ L Sbjct: 673 ASSGQQVAVMFLDLDRFKLINDSFGHQTGDELLRETASRLEQVVGGRGQIARLGGDEFTL 732 Query: 408 RLNTESHQERITALDSHLKQF--RFFW-DGMPM--QPQIGVSYCYVRSPVNHIYLLLGEL 462 ++ + Q ++ L + + W +G + +G+S Y + LL Sbjct: 733 LVSHFASQATLSTLAEDILAVLAQPLWLEGQELIVTGSLGIS-VYPHDGSDARTLLK--- 788 Query: 463 NTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD 522 N + A +N + A + + +++ + L+QALE F L QPI Sbjct: 789 NADVAMYRAKEAGKNTYQFFAAEMNAQAIERLQLERGLRQALERGEFELHFQPIVA--AA 846 Query: 523 VYH----EILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAE-NRAKMP 577 Y E+LLR + L+SP F+P+A E GL I WVI + +AE + + Sbjct: 847 TYRLEALEVLLRWRHPELGLVSPVRFIPLAEETGLIRPIGDWVIRQACRQLAEWDCLGLH 906 Query: 578 AHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQ 637 R AINLS Q ++V+ LA+ I A +L E+TES + N +A L L+ Sbjct: 907 VPRLAINLSARQFEQQGLIMQVAGALAEAGIAAGRLELEMTESMVMQNPSEAVSLLGELK 966 Query: 638 ELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKK 697 LG +++IDDFGTGY+S + LK D LKID SFI + + + I +I +AR Sbjct: 967 ALGVRLSIDDFGTGYSSLSYLKRFPLDTLKIDRSFIEGLPGDGDNAAIAEAILAMARKLS 1026 Query: 698 MLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQP 732 VVAE VE E + + G +QGYL +P P Sbjct: 1027 FSVVAEGVETEAQAAFLCAKGCQLLQGYLFSRPLP 1061 >UniRef50_Q39X25 Diguanylate cyclase/phosphodiesterase n=2 Tax=Geobacter RepID=Q39X25_GEOMG Length = 633 Score = 139 bits (349), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 127/449 (28%), Positives = 206/449 (45%), Gaps = 50/449 (11%) Query: 315 LATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRDA---------PWSALCYLRIPGME 365 +A R RA RI+++AY D + LPN R N LR + P A+ +L + + Sbjct: 182 VAERSRAE-ERIRQMAYYDSLTGLPNRRLFNDRLRQSLALAQRHKRPL-AVMFLDLDRFK 239 Query: 366 MLVKNYGIMLRIQYKQKLSHWLSPLLE-PGEDVYQLSGNDLALRLNTESH-QERITALDS 423 ++ G + + ++ L G+ V + G++ + L+ S ++ T Sbjct: 240 LINDTLGHAVGDRLLMAVAKRLRNCCRREGDTVARQGGDEFIINLSAISDVKDAFTVAQK 299 Query: 424 HLKQFR--FFWDGMPM--QPQIGVSYCYVRSPVNHIYLLLGELNT--VAELSIVTNAPEN 477 + FR F DG + IG+S +Y G V + + Sbjct: 300 IIDVFRTPFVIDGYELFITTSIGIS----------VYPHDGRSGDALVKNADVAMYRAKE 349 Query: 478 MQRRGAMYLQRELK----DKVAMMNRLQQALEHNHFFLMAQPITGMRGDVYH------EI 527 R E+ +++++ N +++ALE + F L QP + +V H E Sbjct: 350 QGRNNCQLFAPEMNARAFERLSLENDMRRALERDEFVLHYQP----KVNVEHGQIACMEA 405 Query: 528 LLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRA----KMPAHRFAI 583 L+R + + L+ P F+P+A E GL + WV+ Q +NRA P + A+ Sbjct: 406 LVRWQHPSMGLVPPSRFIPLAEETGLIVPLGEWVLRTACQ---QNRAWQDAGYPTMQVAV 462 Query: 584 NLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQI 643 NLSP + Q V+++LA+ + L+ EVTES + + ++ T + L +G +I Sbjct: 463 NLSPRQLRQGDLSETVARVLAETGLAPGWLVIEVTESILMDDAEETIRTFRRLDRMGVRI 522 Query: 644 AIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAE 703 +IDDFGTGY+S LK LKID SF+R I SN D I ++ +A+ + VVAE Sbjct: 523 SIDDFGTGYSSLHYLKKFPVHTLKIDRSFVREIASNPDDEAIAGAVISMAKGLNLGVVAE 582 Query: 704 YVENEEIREAVLSLGIDYMQGYLIGKPQP 732 VE E E + +L YMQG+L +P P Sbjct: 583 GVETVEQMEVLRALNCRYMQGFLFSEPAP 611 >UniRef50_A8GYS2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Shewanella RepID=A8GYS2_SHEPA Length = 1072 Score = 139 bits (349), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 86/248 (34%), Positives = 144/248 (58%), Gaps = 7/248 (2%) Query: 489 ELKDKVAMMNRLQQALEHNHFFLMAQPITGMR-GDVYH-EILLRMKGENDELISPDSFLP 546 E+ +++ + RL++A++ + F+L QP+ M G+V E L+R + + +ISP +F+P Sbjct: 798 EMLERMHLEQRLRKAVKQSEFYLEYQPVIDMHSGEVTSVEALVRWQDPDYGVISPQAFIP 857 Query: 547 VAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQAR----FPVEVSQL 602 +A E GL + W+++ L +A+ A+ + AIN+S +R F + + Q Sbjct: 858 IAEEAGLIEPLGEWILQQALSDLAQWHAQGLMLKMAINVSARQCIHSRDISFFDI-LKQT 916 Query: 603 LAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVN 662 LAK+ I A L E+TES + + Q TL+ +++LG I +DDFGTGY++ + L Sbjct: 917 LAKHDIAAENLHIEITESMLIEDKPQCLQTLESIKQLGVDIYLDDFGTGYSALSYLTQCP 976 Query: 663 ADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYM 722 ++KID SFI N + N D +++ +I +A+ +M +VAE VE E + +LG DY Sbjct: 977 ISVIKIDKSFIDNALDNPSDAKLIKAIVMMAQSLEMPLVAEGVETVEQWHFLRNLGCDYA 1036 Query: 723 QGYLIGKP 730 QGYL+ KP Sbjct: 1037 QGYLMSKP 1044 >UniRef50_B6BNH0 Sensory box/ggdef domain/eal domain protein n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BNH0_9PROT Length = 760 Score = 139 bits (349), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 115/436 (26%), Positives = 203/436 (46%), Gaps = 24/436 (5%) Query: 324 RRIQRLAYVDPVVHLPNVRALN--------RALRDAPWSALCYLRIPGMEMLVKNYGIML 375 ++I++ A+ D + L N LN R R + A+ ++ I + + + G + Sbjct: 324 KKIRQQAFYDHLTGLANRLTLNDRLEQQIARLARHNRFGAILFIDIDNFKTINDSLGHHI 383 Query: 376 RIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLKQFRFFWDGM 435 + + S ++ + V +L G++ + L+ S + AL+ R M Sbjct: 384 GDTLLKTFAQRASSIMRKEDTVARLGGDEFVILLSDLSDNKN-HALEYSHNVARKLHKLM 442 Query: 436 --PMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMY-----LQR 488 P++ + Y + + I ++N + + + + Q R + + Sbjct: 443 KEPIEVEEHSLYVTLSIGITTISEEEEDINVILKHADIAMYKAKQQGRNTTCFFEQGMSK 502 Query: 489 ELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDVYH--EILLRMKGENDELISPDSFLP 546 +++D++ + + L++AL+HN F L QPI + + E L+R LI PD F+P Sbjct: 503 KIEDQLILGSELREALKHNQFELYYQPIVETKSSIITSCEALIRWNHPTRGLIYPDDFIP 562 Query: 547 VAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKY 606 A E GL SI WVI+ + + +IN+S Q F ++ + +Y Sbjct: 563 YAEESGLIISIGDWVIQRAC--IDYKKINHKIKNISINISSKQFNQDDFVTKILKATQEY 620 Query: 607 QIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLL 666 + L E+TES AL N+ + L+ G IA+DDFGTGY+S + LKN+ D L Sbjct: 621 SVNPSALKLELTESVALDNLLATTDKMNLLKSHGFTIAMDDFGTGYSSLSYLKNLPFDFL 680 Query: 667 KIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYL 726 KID SFI++++ N D +V +I +++ K V+AE VE +E E + L +Y QG++ Sbjct: 681 KIDRSFIQHVLDNEDDASLVKTILTISKQFKFEVIAEGVEEKEHVEFLKDLDCEYYQGFV 740 Query: 727 IGKPQPLIDTLNEIEP 742 + K P +NE E Sbjct: 741 VSKALP----VNEFEK 752 >UniRef50_C5D2S1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Geobacillus RepID=C5D2S1_GEOSW Length = 676 Score = 139 bits (349), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 108/417 (25%), Positives = 193/417 (46%), Gaps = 20/417 (4%) Query: 324 RRIQRLAYVDPVVHLPNVRALNRALRDAPWS----ALCYLRIPGMEMLVKNYGIMLRIQY 379 ++++LAY D + + N R ++ S ALCYL + + ++ + Sbjct: 247 EKLRQLAYFDSLTGIANRSYFERYIKQLIESQTDFALCYLDFDKFKWINDHFSHQAGDYF 306 Query: 380 KQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLKQFR--FFWDGMPM 437 Q+ + +L + ++ G++ L L + +E D ++ F F+++ + Sbjct: 307 LQEAVRRVQSVLRTEDFFARIGGDEFVLLLPNITKEEVTKLADELVQTFHKPFYYEKQLI 366 Query: 438 QPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRG--AMYLQRELKDKVA 495 Q + + + + I ++ A N+++RG R +++ A Sbjct: 367 QSTLSMGIAFFPKDSDRIEQVM---------KYADQALYNVKKRGKNGYEFYRPTQNRKA 417 Query: 496 MMNR-LQQALEHNHFFLMAQPITGMRGDVYH--EILLRMKGENDELISPDSFLPVAHEFG 552 ++ + L A+ F+L QP + E LLR + + I P F+P+A + G Sbjct: 418 IIEQDLPFAILREQFYLCYQPKIKLDSGATMGVETLLRWRHPSLGEIPPLDFIPLAEQSG 477 Query: 553 LSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQ 612 I +WV+EH+ + + E + + P + A+NLSP + + + +L Sbjct: 478 FIFEITLWVLEHSCRQVKEWQTQFPGLKLAVNLSPFLLNRTELVQHIVHILRDTHFAPEH 537 Query: 613 LIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSF 672 LI EVTES + N + + L L+ +G Q+AIDDFGTG++S A ++N+ LLKID SF Sbjct: 538 LILEVTESGLMENFETGKHILTQLKNIGVQVAIDDFGTGFSSLAYIRNLPVSLLKIDRSF 597 Query: 673 IRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGK 729 I+ I NS D IV +I HLA+ + V+AE VE + + D+ QG+ K Sbjct: 598 IQGIAENSKDATIVDTIIHLAKSLDIQVLAEGVETYHQVALLQQMDCDFAQGFYFSK 654 >UniRef50_D0J677 Diguanylate cyclase/phosphodiesterase n=2 Tax=Comamonas testosteroni RepID=D0J677_COMTE Length = 829 Score = 139 bits (349), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 123/433 (28%), Positives = 210/433 (48%), Gaps = 24/433 (5%) Query: 317 TRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRDA---------PWSALCYLRIPGMEML 367 T QR+ ++I++LAY D + LPN +L+R ++ A P+S L +L + +++ Sbjct: 367 TMQRSAQKQIEQLAYSDALTGLPNRLSLSRHVQAAITAARFTQQPFSIL-FLDLDRFKII 425 Query: 368 VKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLKQ 427 + G + + ++ LS LL P + + + G++ L L+ + + L + Sbjct: 426 NDSLGHDFGDRVLKLVAQRLSGLLRPADVLCRQGGDEFVLYLHDCTGEGASAVAARILDE 485 Query: 428 FR--FFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMY 485 R F DG+ Q + P + L L EL A++++ E + + Y Sbjct: 486 MRQPFMLDGLGFSVQCSIGAAQF--PADG--LTLDELIRQADIAMY-RVKERGRGNFSFY 540 Query: 486 ---LQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELIS 540 + L ++ + + ++QAL+ H + QP +R V E LLR +IS Sbjct: 541 QPQMSAGLLSRMKLEHAMRQALDKGHMAVHFQPQVHIRSGRIVAAEALLRWTDPELGVIS 600 Query: 541 PDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRA-KMPAHRFAINLSPTSVCQARFPVEV 599 P +F+P+A E G ++D WV+E ++Q A A MP + ++N+S Q F + Sbjct: 601 PAAFIPLAEESGYVVALDAWVLEQSVQEAARWLAMDMPV-KVSVNVSALEFRQPDFVDRL 659 Query: 600 SQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLK 659 +L + A L E+TES L ++ + + + ELG + IDDFGTGY+S A LK Sbjct: 660 KYVLEASGLPAQWLELELTESILLQEAQEMALRVHQIAELGVGLVIDDFGTGYSSLAYLK 719 Query: 660 NVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGI 719 + +KID SF+R + ++ D IV +I + + + +VAE VE +E +A+ L Sbjct: 720 KLPISKIKIDQSFVRGLPHDAGDKAIVGAIISMGQALGVELVAEGVETQEQCQAIEQLQG 779 Query: 720 DYMQGYLIGKPQP 732 DY QGYL P Sbjct: 780 DYFQGYLCSPALP 792 >UniRef50_D0SCY0 Putative uncharacterized protein n=2 Tax=Acinetobacter RepID=D0SCY0_ACIJO Length = 692 Score = 138 bits (348), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 92/264 (34%), Positives = 136/264 (51%), Gaps = 16/264 (6%) Query: 487 QRELKDKVAMMNRLQQALEHNHFFLMAQP--------ITGMRGDVYHEILLRMKGENDEL 538 Q+E K + ++N L +A+E F L QP I G+ E L+R K L Sbjct: 428 QQEAKSQTKLINDLYKAVEEQQFVLYYQPKFTIQDQRICGV------EALIRWKHPTLGL 481 Query: 539 ISPDSFLPVAHEFGLSSSIDMWVIEHTL-QFMAENRAKMPAHRFAINLSPTSVCQARFPV 597 ++P+ F+ A + GL + W +E Q R K+ + A+NLS Sbjct: 482 LTPNMFIKGAEKTGLIIQMGYWALEQACKQLQIWEREKIELYPIAVNLSAVQFEHKHLFN 541 Query: 598 EVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYAR 657 + L KY++ LI E+TES A+ +++ + TLQ L+E+G ++AIDDFGTG++S+ Sbjct: 542 NLEHLFDKYKVNPNHLIIEITESTAMHHIEASIRTLQRLREMGIRLAIDDFGTGHSSFLY 601 Query: 658 LKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSL 717 LKN+ D LKID FI + S D I+ SI HLA ++V AE VE+ E + L Sbjct: 602 LKNLPVDELKIDRGFIHELTVGSKDEMILESIVHLAIRLGLVVTAEGVESPLQMEILSRL 661 Query: 718 GIDYMQGYLIGKPQPLIDTLNEIE 741 G +QGYL+G P + L E E Sbjct: 662 GCQQLQGYLLGMPMD-VKRLEEFE 684 >UniRef50_B9L6I3 Diguanylate cyclase/phosphodiesterase n=2 Tax=Nautiliaceae RepID=B9L6I3_NAUPA Length = 682 Score = 138 bits (348), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 83/239 (34%), Positives = 136/239 (56%), Gaps = 7/239 (2%) Query: 497 MNRLQQALEHNHFFLMAQPITGMRGDV-YHEILLRMKGENDELISPDSFLPVAHEFGLSS 555 + +L+ A+E+N QPI G++ +E L+R+ E +++ISP FL VA + L Sbjct: 450 LKKLKVAIENNKIVPFYQPIVDKEGNICKYEALVRLIDEKNQVISPYFFLDVAKKSRLYF 509 Query: 556 SIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIF 615 I VI+ T + +++ + F+INLS + + L+ + E ++ F Sbjct: 510 EITKQVIDKTFKKFNDSK-----YEFSINLSTLDMENDYIKEFIIDKLSNFS-EPQRVSF 563 Query: 616 EVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRN 675 E+ ES + N K A ++ L++ GC+I IDDFG+GYA++ L ++ AD LKIDGS I+N Sbjct: 564 EIVESEDIKNSKNAYEFIKELKKYGCKILIDDFGSGYANFDYLLSLGADGLKIDGSLIKN 623 Query: 676 IVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLI 734 I+++ IV +I + A+ KM ++AE+VEN+E E + +L ID QGY P+ I Sbjct: 624 ILTDKNSQIIVKTIVNFAKEVKMQIIAEFVENKETLEYLKTLDIDCFQGYYFSAPKEEI 682 >UniRef50_A1T0Y1 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Psychromonas ingrahamii 37 RepID=A1T0Y1_PSYIN Length = 727 Score = 138 bits (348), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 134/483 (27%), Positives = 227/483 (46%), Gaps = 40/483 (8%) Query: 278 IHSYQNYIPIYPGYTTQLTITSS----SYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVD 333 IH Q + G + + T+S + S IV ++ R++ +++ RLA D Sbjct: 220 IHDDQQSFHCFDGSSFPVEFTASPICKTNSESSGIVLVFQDISERKK-TEQQLTRLAQYD 278 Query: 334 PVVHLPN--------VRALNRALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSH 385 + LPN +A++R+ R AL +L + + + + G + Q+++ Sbjct: 279 CLTGLPNRALFTSLLSQAISRSDRRKNKLALLFLDLDRFKQVNDSLGHDVGDLLLQQVAQ 338 Query: 386 WLSPLLEPGEDVYQLSGNDLAL---RLNTESH------QERITALDSHLKQFRFFWDGMP 436 L G V +L G++ + +N+ESH Q+ IT+LD+ F + Sbjct: 339 RLQLATLEGGTVSRLGGDEFMVILEEVNSESHKAAKLAQKMITSLDA---PFNILGREVL 395 Query: 437 MQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMY---LQRELKDK 493 + IG++ C + + L A++++ A E + Y LQ++ Sbjct: 396 ISTSIGIALCSGSTQC------IDSLLKRADMAMY-RAKEQGRNNFQFYTAELQQQASKS 448 Query: 494 VAMMNRLQQALEHNHFFLMAQP-ITGMRGDVYH-EILLRMKGENDELISPDSFLPVAHEF 551 + + NRL+ AL+ FFL QP + G + E LLR + + LISP+ F+PVA E Sbjct: 449 IELENRLRHALQRKEFFLHYQPQVDTNSGQIIGLEALLRWQPDGQALISPEEFIPVAEEA 508 Query: 552 GLSSSIDMWVI-EHTLQFMAENRAKM--PAHRFAINLSPTSVCQARFPVEVSQLLAKYQI 608 GL I WV+ E Q +R+ + P + A+NLS + ++Q+L + + Sbjct: 509 GLIVPIGEWVLREACSQLHRWHRSGLLSPTVKMAVNLSVRQLEHTSLLSTLTQILQETGL 568 Query: 609 EAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKI 668 + QL E+TE+ + + L + +G Q+++DDFGTGY+S LK + +LKI Sbjct: 569 KPSQLELEITETAVMKDPDLVVNILHSIHAMGIQLSLDDFGTGYSSLRYLKLLPLHVLKI 628 Query: 669 DGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIG 728 D SFI +I D I+ SI +L+R + VVAE VE +E + + +QGY I Sbjct: 629 DRSFINDIGGKQRDQAILESIIYLSRNLDLTVVAEGVETQEQLDFLSRFNCHSIQGYYIS 688 Query: 729 KPQ 731 KP+ Sbjct: 689 KPK 691 >UniRef50_A7K0U5 Sensory box/GGDEF family protein n=14 Tax=Vibrio RepID=A7K0U5_VIBSE Length = 815 Score = 138 bits (348), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 132/467 (28%), Positives = 219/467 (46%), Gaps = 35/467 (7%) Query: 287 IYPGYTTQLTITSSSYLVFSFIVNYMAVLA--TRQRAVVRRIQRLAYVDPVVHLPN---- 340 IYP QL S+ + ++NY+ V + ++A ++QR+A+ DP+ +LPN Sbjct: 353 IYP----QLATISAVMDDKNHLINYICVFEDISVRKAHEEKLQRMAFYDPLTNLPNRTHL 408 Query: 341 ----VRALNRALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGED 396 + + ++ A +L I + + + G Q KL+ L +L Sbjct: 409 LSLLEQHIETGHKNQQTFATLFLDIDHFKHINDSMGHFCGDQLLSKLAIRLQDILHLNAH 468 Query: 397 VYQLSGNDLALRL-NTESHQERITALDSHLKQFRFFWD-----GMPMQPQIGVSYCYVRS 450 V ++ G++ + L + S + + L F+ +D + + IG++ Y R Sbjct: 469 VARIGGDEFVIILPDVHSDVALLETVGDILSVFQQPFDLANHDSLRVSTSIGIA-LYPRD 527 Query: 451 PVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDK----VAMMNRLQQALEH 506 + LL +T L+ + R G + +L DK V + + L QA+E Sbjct: 528 GQDS-ETLLKNADTAMYLA------KKNGRNGYAFYSPDLTDKSVSHVRIQSALHQAIEK 580 Query: 507 NHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEH 564 L QP + V E LLR + L+ P F+P+A + GL SI WV+ H Sbjct: 581 QQLRLEFQPQYNLEQHAIVGVETLLRWQHPEFGLVPPADFIPIAEKTGLIQSIGEWVLLH 640 Query: 565 TLQ-FMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNAL 623 Q A + R A+N+S + Q+ F +S +L + A +L E+TES L Sbjct: 641 ACQQGNAWLEQGVEFGRIAVNVSALQLQQSNFIQRLSDILNQTGFPAQRLDLEITESFLL 700 Query: 624 TNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDY 683 + +QA +L L+ELG +I++DDFGTGY+S + LK + + LKID SF+ ++ SNS Sbjct: 701 IDPQQAIASLNQLRELGIEISLDDFGTGYSSLSYLKGLPINKLKIDRSFVSDVPSNSDSN 760 Query: 684 QIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKP 730 IV +I + + + VVAE +E +E + + G Y QGYL +P Sbjct: 761 AIVNAIIAMGKTLSLKVVAEGIETQEQADYLFEKGCVYGQGYLFSRP 807 >UniRef50_C9Y8E7 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y8E7_9BURK Length = 633 Score = 138 bits (348), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 92/307 (29%), Positives = 154/307 (50%), Gaps = 19/307 (6%) Query: 434 GMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSI--VTNAPENMQRRGAMYLQRELK 491 G+ + PQ G S+ EL A+L++ A N R + ++ + Sbjct: 323 GIALYPQHGNSF--------------DELMRHADLAMYHAKEAGRNTFRFFSEDIRSSVT 368 Query: 492 DKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAH 549 + + +++ L+QA+ F L QP+ + + E L+R + ++SP F+ +A Sbjct: 369 ESLHLISSLRQAVTQEEFVLHYQPVYDLHSGRLLGAEALVRWQNPKLGMVSPGLFITLAE 428 Query: 550 EFGLSSSIDMWVIEHTLQFMAENRAKMPAHRF-AINLSPTSVCQARFPVEVSQLLAKYQI 608 + GL I WV+ + M R + F ++NLSP + ++Q L + + Sbjct: 429 KSGLIVDIGQWVLTEACRQMQAWRQQGATDLFVSVNLSPVQFSRGNVEAVIAQALRETGL 488 Query: 609 EAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKI 668 + QL EVTES + + ++ TL +Q G +++IDDFGTGY++ + L+ LKI Sbjct: 489 DPRQLELEVTESTLIHDTEKFITTLGRIQHSGIRMSIDDFGTGYSNLSYLQRFPVHKLKI 548 Query: 669 DGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIG 728 D SF+R ++ D +V++I HLA+ ++ V AE VENE REA+ +G D QGYL Sbjct: 549 DQSFVRRLMQGQKDVAMVSAIIHLAKSLQLTVTAEGVENEATREALTRMGCDQAQGYLFA 608 Query: 729 KPQPLID 735 +P P D Sbjct: 609 RPMPAKD 615 >UniRef50_B8GN35 Diguanylate cyclase/phosphodiesterase with GAF sensor n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GN35_THISH Length = 706 Score = 138 bits (347), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 121/436 (27%), Positives = 199/436 (45%), Gaps = 43/436 (9%) Query: 326 IQRLAYVDPVVHLPNV--------RALNRALRDAPWSALCYLRIPGMEMLVKNYGIMLRI 377 ++R DP+ LPN +AL RA + + L + G+ ++ + G Sbjct: 272 LERSTRYDPLTGLPNRGLLEERIGQALLRARHHRRYIGVMALEVLGLRAVIDSLGRQQGD 331 Query: 378 QYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLKQFRFFWDGMPM 437 + +Q ++ L L G+ V L + AL L ++ + L + P Sbjct: 332 RLQQVVARRLLSRLREGDTVAHLGNGEFALLLCDLRMGMDVSEVADKLLE--------PF 383 Query: 438 QPQIGVSYCYVRSPVNHIYLLLG------------ELNTVAELSIVTNAPENMQRRGAMY 485 + ++G P H+ L G EL A +++ ++ R Y Sbjct: 384 ELEMGGDL-----PPLHVKLSAGAAVYPGDAESGPELLHCAGVALHQGGAQSHAGRCVFY 438 Query: 486 LQRELKDKV----AMMNRLQQALEHNHFFLMAQPITGMR-GDVYH-EILLRMKGENDELI 539 RE+ ++V A+ N LQ AL+ + L QPI R G V E LLR + Sbjct: 439 -AREMDERVREYQALDNELQGALQRDEMHLHYQPIVNTRDGSVLGVEALLRWDNRRFGSV 497 Query: 540 SPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAH-RFAINLSPTSVCQARFPVE 598 SP F+P+A GL S+ WV+E +A RA+ H ++NLS + F + Sbjct: 498 SPGRFIPMAEHSGLILSLGEWVLEQACAQIAHWRAQGWNHLHMSVNLSARQLLTPGFDTQ 557 Query: 599 VSQLLAKYQIEAWQ--LIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYA 656 V ++L ++ ++ L+ EVTE+ + +++Q L L+ LG + +DDFGTGYAS + Sbjct: 558 VVKVLERHGLDKDDMPLVLEVTETAVIEDMEQVSEALFRLKRLGIAVHLDDFGTGYASLS 617 Query: 657 RLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLS 716 L + D LKID SF+R + + + ++ ++ LA + +VAE VE +E R+ + Sbjct: 618 YLHRLPVDALKIDQSFVRGLGGDPVAENLIRTLVVLAERLDLSLVAEGVETDEQRDILRR 677 Query: 717 LGIDYMQGYLIGKPQP 732 LG D QGYL +P P Sbjct: 678 LGCDVAQGYLFARPAP 693 >UniRef50_A1U6N9 Diguanylate cyclase/phosphodiesterase n=2 Tax=Marinobacter RepID=A1U6N9_MARAV Length = 853 Score = 138 bits (347), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 88/317 (27%), Positives = 153/317 (48%), Gaps = 19/317 (5%) Query: 435 MPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELK--- 491 +P+ PQ+GV++ + NT+ +++ + + RG Y + Sbjct: 537 VPLNPQLGVAFYPTHG---------NDANTLIRRAVIAEGSDRARDRGIAYYKSSRDSYS 587 Query: 492 -DKVAMMNRLQQALEHNHFFLMAQPITGMRGDVYH--EILLRMKGENDELISPDSFLPVA 548 D++ +++ L+ A++HN L QP +R E L+R G ++ + PD + VA Sbjct: 588 ADRLTLVSDLRHAIDHNELTLFLQPKLCLRTRAITGFEALIRWPGR-EQPVRPDEIIAVA 646 Query: 549 HEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQI 608 + GL + WV++ L+ A+N+SP ++ + F V V +L+ YQI Sbjct: 647 EQTGLIKPLTRWVLKEALEMRGRLLEIGWDAGIAVNISPNNLREPDFAVFVQRLMQSYQI 706 Query: 609 EAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKI 668 + + FEVTE++ + + + L L G ++IDDFG+GY+S + +K + A +KI Sbjct: 707 HSGAITFEVTETSMMQDPTNSLRALNALDAAGIPLSIDDFGSGYSSLSYIKQLPAGEIKI 766 Query: 669 DGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIG 728 D S I +I D IV + + VVAE VE+EE + +G D +QGY + Sbjct: 767 DRSLITDIAEREQDRVIVRTTIDMCHSLGYTVVAEGVEDEETLSLLHDMGCDLIQGYFLT 826 Query: 729 KPQP---LIDTLNEIEP 742 +P P ++D L P Sbjct: 827 RPLPFNEMVDWLGNYNP 843 >UniRef50_B7GID3 Multidomain signal transduction protein (Contains GGDEF and EAL domains) n=1 Tax=Anoxybacillus flavithermus WK1 RepID=B7GID3_ANOFW Length = 552 Score = 138 bits (347), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 86/248 (34%), Positives = 138/248 (55%), Gaps = 3/248 (1%) Query: 486 LQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMR-GDVYH-EILLRMKGENDELISPDS 543 L++ ++K+ + + +++AL+ N F L QPI ++ GD+ E LLR ISP + Sbjct: 287 LKKTNEEKLYIQHSIRKALKQNEFTLHYQPIVDIQTGDIVAVEALLRWFHPKRGWISPAT 346 Query: 544 FLPVAHEFGLSSSIDMWVIEHTLQFMAENRAK-MPAHRFAINLSPTSVCQARFPVEVSQL 602 F+P+A E L I WV+ + + + + K +P + +N+S QA + + Sbjct: 347 FIPIAEETNLIQPIGDWVLRNVCEQSKKWKEKGLPHVQIGVNVSIKQFLQADLVKHIEHV 406 Query: 603 LAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVN 662 L Y ++ + L E+TES A+ ++ LQ L+ LG Q+A+DDFGTGY+S LK + Sbjct: 407 LRTYDLDPFCLKLEITESMAMHHIDYVLAQLQSLKHLGLQLAVDDFGTGYSSLNYLKKLP 466 Query: 663 ADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYM 722 D++KID SF++++V +S D IV ++ +A +M VVAE VE EE + G D Sbjct: 467 VDIIKIDRSFVQDMVKHSYDLSIVRAVIQVAHSLQMKVVAEGVETEEQLAILKREGCDRA 526 Query: 723 QGYLIGKP 730 QGY KP Sbjct: 527 QGYYFSKP 534 >UniRef50_C6P6X8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6X8_9PROT Length = 713 Score = 138 bits (347), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 130/437 (29%), Positives = 207/437 (47%), Gaps = 36/437 (8%) Query: 326 IQRLAYVDPVVHLPNVR--------ALNRALRDAPWSALCYLRIPGMEMLVKNYGIMLRI 377 +Q A DP+ LPN R AL + R AL ++ + + L G + Sbjct: 275 LQSQATSDPLTGLPNRRFMLDRLKHALASSSRSGREGALLFIDLDNFKTLNDTLGHDVGD 334 Query: 378 QYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLKQFRFFWDGMPM 437 Q Q+++H L + G+ V +L G++ + L S ++ A + + Sbjct: 335 QLLQQVAHRLETCVREGDTVARLGGDEFVVMLEDLSEKDLEAAAQTEAVGEKIL--AALN 392 Query: 438 QP-QIGVSYCYVRSPV------NHIYLLLGELNTVAELSI--VTNAPENMQRRGAMYLQR 488 QP Q+G + Y +P N L EL A++++ A N R +Q Sbjct: 393 QPYQLG-KHEYRNTPSIGATLFNDHQQSLDELLKQADIAMYQAKRAGRNALRFFDPQMQE 451 Query: 489 ELKDKVAMMNRLQQALEHNHFFLMAQ-PITGMRGDVYH-----EILLRMKGENDELISPD 542 + + + N L++ALE + F+L Q + ++ D H E L+R L+SP Sbjct: 452 TINSRATLENELRKALELHQFYLFYQVQVDSVQEDGSHRATGAEALIRWAHPERGLVSPA 511 Query: 543 SFLPVAHEFGLSSSIDMWVIE------HTLQFMAENRAKMPAHRFAINLSPTSVCQARFP 596 F+P+A E GL I +WV++ T Q A R + A+N+S Q F Sbjct: 512 QFIPLAEETGLIVPIGLWVLDTACAQLKTWQHDALTRGLV----LAVNVSAKQFRQPDFV 567 Query: 597 VEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYA 656 +V + ++ I+ L E+TES L N++ T+ L+E+G + ++DDFGTGY+S Sbjct: 568 AQVDAAVQRHGIDPKLLKLELTESLLLENIQDTIATMNALREIGIRFSLDDFGTGYSSLQ 627 Query: 657 RLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLS 716 LK + D LKID SFI ++VS+S D IV +I +A+ + V+AE VE E R+ +L Sbjct: 628 YLKQLPLDQLKIDQSFICDLVSDSSDRAIVRTIIAMAQSLNLNVIAEGVETEAQRQILLE 687 Query: 717 LGIDYMQGYLIGKPQPL 733 G + QGYL KP P+ Sbjct: 688 KGCIHHQGYLFSKPVPI 704 >UniRef50_A0KIX5 PAS:GGDEF domain protein n=1 Tax=Aeromonas hydrophila subsp. hydrophila ATCC 7966 RepID=A0KIX5_AERHH Length = 992 Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 124/435 (28%), Positives = 213/435 (48%), Gaps = 27/435 (6%) Query: 317 TRQRAVVRRIQRLAYVDPVVHLPNVRALN----RALRDAP--WSALCYLRIPGMEMLVKN 370 ++++ R I++LAY D + L N R+LN R L++A W AL + + + + + Sbjct: 548 SKEKEAARHIEQLAYYDDLCGLYNRRSLNDIMQRTLQEASGQWGALLLVDLDNFKSINDS 607 Query: 371 YGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITA--LDSHLKQ- 427 G Q + L L + + ++SG++ AL L + Q +TA L H + Sbjct: 608 LGHACGDLLLQAVVERLKGLPQDNLVLARISGDEFAL-LFSALGQGYVTAKILAEHFARE 666 Query: 428 ----FRFFWD----GMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQ 479 FR +D + +G+S + +H+ +L+ + +T ++ + + Sbjct: 667 LMGLFRIPFDIEDHKLHCSASVGIS-LFSSEDKDHL-VLMQQADTATHMAKRSGQGNYVF 724 Query: 480 RRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDVYH--EILLRMKGENDE 537 AM + K K+A+ N+L+ AL H+ L QP + E LLR + + Sbjct: 725 FSEAMAEKE--KSKLALNNQLRDALRHHELQLHYQPQYRVDNGALSGIEALLRWQRSDGS 782 Query: 538 LISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMA--ENRAKMPAHRFAINLSPTSVCQARF 595 ++ P F+P+A E L I WV++ + NR H ++N+S F Sbjct: 783 MVPPAEFIPIAEETSLIQDIGYWVMKTACAQYSFWLNRGLAIPH-LSVNVSARQFHTVGF 841 Query: 596 PVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASY 655 +V +L + +L+ EVTES L N ++ ++ L+ELG ++IDDFGTGY+S Sbjct: 842 VQQVEYILRDTGVPPSRLLLEVTESVVLENRLESIARMRQLKELGILLSIDDFGTGYSSL 901 Query: 656 ARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVL 715 A L+++ AD +K+D SFI+ +V + D IV +I LA++ + V AE VE+EE + Sbjct: 902 AYLRDLPADEVKLDRSFIQTLVHSEQDKAIVKAILELAKVFRFTVTAEGVEDEEQLAILK 961 Query: 716 SLGIDYMQGYLIGKP 730 SLG + QG+L +P Sbjct: 962 SLGCQHYQGFLTSRP 976 >UniRef50_A6VUG3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VUG3_MARMS Length = 731 Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 128/477 (26%), Positives = 222/477 (46%), Gaps = 29/477 (6%) Query: 293 TQLTITSSSYLVFSFIVNYMAVLAT--------RQRAVVRR----IQRLAYVDPVVHLPN 340 TQL + SF V ++ LA + R +V+ +Q LAY DP+ LPN Sbjct: 254 TQLKQRKITGYAISFAVAFLLSLALYAILIQPLKLRKLVKEKTAELQELAYKDPLTGLPN 313 Query: 341 VRALNRAL--------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLE 392 R L +L R SA Y + + + G + Q + L+ L Sbjct: 314 RRFLQDSLPKTLHNNQRRKRISAFIYFDLDNFKRINDTIGHDVGDQVLIIVGDRLNKLKA 373 Query: 393 PGEDVYQLSGNDLALRLNTESHQERITALDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPV 452 + V +L G++ + L +++ + + + + M + I + + Sbjct: 374 MSDLVVRLGGDEFGILLGDIGDEKQASEQANRILESIRTPIKMDSREYILSTSLGIAMIP 433 Query: 453 NHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQR---ELKDKVAMMNRLQQALEHNHF 509 H Y L+ + A++++ A + + A Y ++ + + L AL+ N F Sbjct: 434 EHGYDLVTIMQN-ADMALY-QAKLKGKNQYAFYTEKMKISTHNLIKAEEDLTLALQRNEF 491 Query: 510 FLMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQ 567 + QP +R + E L+R +I P+ F+P+A G + WV+E ++ Sbjct: 492 EMYYQPQFNIRTNHVFGAEALIRWNHPEKGVIFPNDFIPLAESTGKIVELGYWVLESSIA 551 Query: 568 FMAENRAK-MPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNV 626 ++A+ + + P INL+ + F V +LL KYQ+ A + FE+TE++ L ++ Sbjct: 552 YLAKRKQEGRPDILLHINLASEQLSDPHFVALVQELLGKYQVPAHLIGFEITETSILEDI 611 Query: 627 KQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIV 686 A+ LQ L+++G IAIDDFGTGY+S ++LKN+ DLLKID SF+ ++ ++ D +IV Sbjct: 612 HLARYLLQTLKDMGICIAIDDFGTGYSSLSQLKNLPVDLLKIDRSFVMDLENDPDDRKIV 671 Query: 687 ASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPI 743 +I +A + V+AE VE E + + + D+ QGY + K D N+ PI Sbjct: 672 EAIIAMAHKLNIKVLAEGVETREQWKMLAAFQCDFGQGYYVSKA-VTADEFNQGSPI 727 >UniRef50_Q31HK1 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31HK1_THICR Length = 864 Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 80/231 (34%), Positives = 133/231 (57%), Gaps = 12/231 (5%) Query: 514 QPITGMR-GDV-YHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAE 571 QPI M G++ HE+L+R++ +N ELIS F+ A GL + +D+ +I+ L Sbjct: 621 QPIICMETGEIAVHELLMRLR-QNGELISASRFIETAEHMGLVNQMDLVLIDKALA---- 675 Query: 572 NRAKMPAHR--FAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQA 629 + ++ +R INLSP ++ + F ++ L KY++ +++FE+TE + N+ Sbjct: 676 -QVQISDYRGLVFINLSPKAIVASEFIAKIKGLTEKYEVHHERIVFEITERETVHNIALL 734 Query: 630 QITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASI 689 + ++ L+ G + AIDDFG+G++S+ LK D +KI+G FI N+ N +D V S Sbjct: 735 EKFVRELRSEGFRFAIDDFGSGFSSFQYLKRFPVDFIKIEGEFINNMSKNKIDLAFVESA 794 Query: 690 CHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEI 740 +A + +AE++EN+E V LGIDY QG+L+ PQP + LNE+ Sbjct: 795 VSMATSLGIKTIAEFIENKETLLLVKQLGIDYAQGFLLATPQP--EFLNEL 843 >UniRef50_Q2SN60 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SN60_HAHCH Length = 1290 Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 103/380 (27%), Positives = 184/380 (48%), Gaps = 16/380 (4%) Query: 366 MLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQ--ERITALDS 423 ++ ++ GI Q + ++ L L P V + G++ L + E+ E+IT + Sbjct: 916 LINESAGIEAGDQALKDIASLLKSLFTPKTLVCRFGGDEFMLLVEGEATAAVEKIT---T 972 Query: 424 HLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAEL--SIVTNAPENMQRR 481 L+Q++ W+ + Y V V + ++ + A S N E Sbjct: 973 ALRQYQLRWESNVFSVSASIGYVEVSGGVLDVPHMVQAVEEAARRAKSKGGNRVEEFDVD 1032 Query: 482 GAMYLQRE-LKDKVAMMNRLQQALEHNHFFLMAQPI----TGMRGDVYHEILLRMKGEND 536 A+ +R+ + KVA + + LE+ L Q I G + +EILL + +N Sbjct: 1033 RALIARRDAIASKVASLGK---ELENERVLLRCQKIIPLHPGAKMGAQYEILLSIYDDNG 1089 Query: 537 ELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPA-HRFAINLSPTSVCQARF 595 LI F+ A + ++D WV+ H L +M++NR ++ +INLS S+ Sbjct: 1090 NLIPAGDFVRAAETYKRMQAVDRWVVGHMLDWMSKNRQQIETMGGVSINLSGHSLNDEGL 1149 Query: 596 PVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASY 655 + + L KY ++ FE+TE+ A++N+ + LQE GC+ + DFGT ASY Sbjct: 1150 LEFIFERLTKYDCPMDKMCFEITEAAAISNLCDVSEFIVELQEYGCRFCLGDFGTAMASY 1209 Query: 656 ARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVL 715 LK + DL+K+DGSF++++ ++ D ++ S+ +A ++A VE +E E + Sbjct: 1210 QYLKQLPVDLIKVDGSFVKDVATDQNDQTMIRSMTEMAHYLGREIIAPQVETKESLEMLQ 1269 Query: 716 SLGIDYMQGYLIGKPQPLID 735 LG+DY+QG+ I +P+ L + Sbjct: 1270 KLGVDYVQGFYIERPKSLAN 1289 >UniRef50_C5T9Y9 Diguanylate cyclase/phosphodiesterase with extracellular sensor n=3 Tax=Comamonadaceae RepID=C5T9Y9_ACIDE Length = 777 Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 85/246 (34%), Positives = 129/246 (52%), Gaps = 2/246 (0%) Query: 494 VAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEF 551 ++++ L+ A+EH+ L QP + G + E L+R + L+ P F+P A + Sbjct: 525 LSLLTELRHAVEHHELRLYLQPKIALHGQPGLAAEALVRWQHPQRGLVPPMEFIPFAEQT 584 Query: 552 GLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAW 611 G + +W+ E +++A A+ R ++NLS + ++ LLA+Y + A Sbjct: 585 GFVRQLTLWMFEEVCRWLATPAARHLPLRVSVNLSTRDLLDPELCHRLAALLARYGVAAS 644 Query: 612 QLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGS 671 L E+TES + + ++A+ L L E G +++IDDFGTGY+S A LK + D LKID S Sbjct: 645 ALCLEITESAIMDDPQRAEAMLNRLSEHGFKLSIDDFGTGYSSLAYLKRLPVDELKIDKS 704 Query: 672 FIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQ 731 F+ + S D IV S LA + VVAE VE + I + SL D QGY I KP Sbjct: 705 FVMGMESAGDDALIVRSTIDLAHNLGLTVVAEGVETQAILGHLRSLSCDEAQGYAISKPL 764 Query: 732 PLIDTL 737 P D L Sbjct: 765 PAADYL 770 >UniRef50_A4W933 Diguanylate cyclase/phosphodiesterase n=3 Tax=Enterobacteriaceae RepID=A4W933_ENT38 Length = 642 Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 93/259 (35%), Positives = 146/259 (56%), Gaps = 29/259 (11%) Query: 496 MMNRLQQA--LEHN--------HFFLMAQPI-TGMRGDVY-HEILLR----MKGENDELI 539 M+++LQ++ LEH+ F + QPI ++Y +E L+R +KG ++ Sbjct: 388 MLDKLQESRTLEHDMALALANKEFVVYYQPIVDSFTQEIYSYEALIRWIHPLKG----IL 443 Query: 540 SPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAK---MPAHRFAINLSPTSVCQARFP 596 SPD+F+PVA + G+ + + ++E MA A +PA + ++N+SP + F Sbjct: 444 SPDTFIPVAEKTGMINEMGKSMLE-----MACREAVSWVIPA-KISVNVSPVQLSSKAFA 497 Query: 597 VEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYA 656 V +L + + A +L EVTES+ T K TL L+ LG +I+IDDFGTGY+S + Sbjct: 498 GIVVSILNETGLSAERLELEVTESSLFTESKTPMNTLNRLRTLGVKISIDDFGTGYSSLS 557 Query: 657 RLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLS 716 RL + D +KID SF+ ++ + I+ I +A+ M VAE VE +E E++ + Sbjct: 558 RLSRLAFDKIKIDKSFVNSVSTQEDALNIIRLITGMAKSLNMKTVAEGVETQEQLESLQA 617 Query: 717 LGIDYMQGYLIGKPQPLID 735 LG D++QGYL GKPQP ID Sbjct: 618 LGCDFIQGYLFGKPQPYID 636 >UniRef50_B8HWB1 Diguanylate cyclase/phosphodiesterase with FHA and GAF sensor n=2 Tax=Cyanothece sp. PCC 7425 RepID=B8HWB1_CYAP4 Length = 884 Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 131/466 (28%), Positives = 214/466 (45%), Gaps = 69/466 (14%) Query: 310 NYMAVLATRQRAVVRRIQRL---------AYVDPVVHLPN----VRALNRALRDAPWS-- 354 N AVLA ++ IQR A+ D + LPN + LN AL +A S Sbjct: 419 NEEAVLAMMAVSISGAIQRQHKEQVIRYQAFHDLLTDLPNRALFIDRLNLALSNAHRSGE 478 Query: 355 --ALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLN-- 410 ++ +L + + + G + Q + ++H L+ L G+ + + G++ + L Sbjct: 479 KLSVLFLDLDRFKTINDTLGHSVGDQLLKAVAHRLTHCLREGDTIARWGGDEFTILLPQI 538 Query: 411 ------TESHQERITALDS--HLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGEL 462 ++ Q ++AL+ HL+ + + P IG++ IY L G Sbjct: 539 HQVNDVAKTAQRMLSALEQPFHLENHELY-----ITPSIGIA----------IYDLDGHD 583 Query: 463 NT--VAELSIVTNAPENMQRRGAMY----LQRELKDKVAMMNRLQQALEHNHFFLMAQP- 515 + + + + R + L +++ + L+ ALE F L QP Sbjct: 584 GETLIKHADMALYQAKQLGRNTYQFFCSGLSNGAPERLNLEKSLRHALERQEFLLYYQPQ 643 Query: 516 -------ITGMRGDVYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQF 568 ITGM E LLR K L+ P F+ VA E GL +I WV+ Sbjct: 644 VNIKTGKITGM------EALLRWKHPEMGLVIPQLFMSVAEESGLIVAIGEWVLRTAC-- 695 Query: 569 MAENRA----KMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALT 624 A+N+ +P A+NLS Q ++++L + + L E+TE+ A+ Sbjct: 696 -AQNKTWQDQGLPPICIAVNLSARQFRQPDLTGMIARILDETGLPPQYLDLEITETTAIQ 754 Query: 625 NVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQ 684 +++ + LQ LQ++G QI++DDFGTGY+S A L+ + LKID SF+R++ +NS D Q Sbjct: 755 DIEFTKRVLQELQDMGIQISMDDFGTGYSSLAHLQQFPLNTLKIDRSFVRDVAANSRDAQ 814 Query: 685 IVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKP 730 IV ++ LAR + VVAE VEN+E + SL + QGY+ +P Sbjct: 815 IVTAVIGLARGLNLNVVAEGVENDEQLNCLESLHCEEAQGYIFNRP 860 >UniRef50_B6EQU6 Putative membrane associated signaling protein n=1 Tax=Aliivibrio salmonicida LFI1238 RepID=B6EQU6_ALISL Length = 531 Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 83/248 (33%), Positives = 134/248 (54%), Gaps = 2/248 (0%) Query: 488 RELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDVYH--EILLRMKGENDELISPDSFL 545 + + +++ ++++L A+ ++ F L QPI H E L+R ++ +I PD F+ Sbjct: 264 KSINEELRILDKLVYAVPNSEFELYYQPIVNSIDKTIHGYEALIRWPQKDGTMIPPDQFI 323 Query: 546 PVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAK 605 VA I WV+ + + + + H+ IN+S + +++S LL Sbjct: 324 LVAENNNFIKGITEWVVRQVARDIQRFKMENIHHQVHINISTLDLHDNDLYIQLSDLLIN 383 Query: 606 YQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADL 665 IE ++ EVTES ++++ A + L ELG I+IDDFGTG++S + L+ + + Sbjct: 384 RIIEPSDVVLEVTESALMSDIDAAYLMLSKFSELGFYISIDDFGTGFSSLSLLRILTFNQ 443 Query: 666 LKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGY 725 +KID SFIRN+ + DY IVAS +LA VVAE VE++ + + LG DY+QGY Sbjct: 444 IKIDQSFIRNMSIGNSDYAIVASTIYLAHSLGCNVVAEGVEDQSLFNELRELGCDYIQGY 503 Query: 726 LIGKPQPL 733 I KPQ L Sbjct: 504 FIHKPQDL 511 >UniRef50_Q478F7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q478F7_DECAR Length = 739 Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 125/471 (26%), Positives = 214/471 (45%), Gaps = 28/471 (5%) Query: 287 IYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRAL-N 345 I+P + T + V ++ + + + + I LA+ DP+ +PN R L N Sbjct: 250 IFPEWLTISGVRDGRGKVTHYVSTFSDI--SNLKVAESEIHHLAFYDPLTAMPNRRLLLN 307 Query: 346 R-------ALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVY 398 R A R + AL + I + L G + +++ LS + G+ Sbjct: 308 RLDQACVSAKRSGQFGALLIIDIDHFKTLNDTLGHDVGDHLLVEVARRLSACIREGDTAA 367 Query: 399 QLSGNDLALRLNTESHQERITALDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLL 458 + G++ + L ++ A+ + + + + + + Y RS I L Sbjct: 368 RQGGDEFVVMLEELGSEQEGAAVQAEIVAEKIRLE-LARPYLLNGDTEYFRSASIGISLF 426 Query: 459 LGELNTV------AELSI--VTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFF 510 G+ T+ A++++ +A N R +Q L ++ + L++AL + F Sbjct: 427 FGQEKTIDILLKQADIALYKAKDAGRNAIRFFDTAMQTTLDERAELEAGLRRALVRDEFV 486 Query: 511 LMAQP-ITGMRGDVYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFM 569 L QP + +R + E LLR + +++P+ F+P+A E GL I +WV++ Q Sbjct: 487 LYVQPQVDAVRRLIGAEALLRWQPPGRAMVAPNDFIPLAEETGLIVPIGIWVLD---QAC 543 Query: 570 AENRAKMPAHRFA-----INLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALT 624 AE R R A +N+S QA F +V+ LA++ L E+TES L Sbjct: 544 AELRRWADDPRSASLFLSVNVSARQFRQADFVAQVADALARHGANPRLLKLELTESLLLD 603 Query: 625 NVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQ 684 NV++ +Q L+ +G + ++DDFGTGYAS + LK + LK+D SFIR+I N D Sbjct: 604 NVEEVIEKMQALRTIGVRFSLDDFGTGYASLSYLKRFPFEQLKVDRSFIRDININPDDAA 663 Query: 685 IVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLID 735 IV +I + ++ VVAE VE++ ++ QGYL G+P D Sbjct: 664 IVRAIIAMGNTLRLSVVAEGVEDDLQHAYLVKHECSLFQGYLFGRPMSFDD 714 >UniRef50_C7RL13 Diguanylate cyclase/phosphodiesterase with extracellular sensor n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RL13_9PROT Length = 821 Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 84/237 (35%), Positives = 135/237 (56%), Gaps = 9/237 (3%) Query: 499 RLQQALEHNHFFLMAQPITGMRGDV---YHEILLRMKGEND--ELISPDSFLPVAHEFGL 553 R+ +AL+ F L Q + D+ Y E L+RM E D LISP F+P A G Sbjct: 561 RINRALQDQRFVLHFQAVH-RAADLQVTYFEALVRMVDETDPSRLISPADFVPHAELSGK 619 Query: 554 SSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQL 613 ID WV + + +A P+ A NLS S+ A FP + L + +++ +L Sbjct: 620 VRQIDRWVFLNCARKLASTD---PSVCIAANLSARSLEDATFPAFLDDTLRQLEVDPRRL 676 Query: 614 IFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFI 673 EVTE++A+++ A+ + L+ LGC + +DDFG+G++S+A LK ++ + +KIDG+FI Sbjct: 677 HIEVTETSAISDPAAARRMIDALRGLGCAVYLDDFGSGFSSFAHLKLLDVEAIKIDGAFI 736 Query: 674 RNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKP 730 R++ +S + VAS+ +A K L VAE+VE+ + + SLG+D +QG+ +G P Sbjct: 737 RDLHGDSTNRLFVASMIEIAHHLKKLAVAEHVEDASTLDILRSLGVDLVQGFHLGHP 793 >UniRef50_A0YXI3 PAS:GGDEF protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YXI3_9CYAN Length = 277 Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 83/241 (34%), Positives = 136/241 (56%), Gaps = 4/241 (1%) Query: 497 MNRLQQALEHNHFFLMAQ---PITGMRGDVYHEILLRMKGENDELISPDSFLPVAHEFGL 553 + +++QAL N F L Q P+T + + E+LLR++ EN++LISP FL VA + L Sbjct: 31 VKQIKQALSENRFCLYLQEITPLTTLDYRRFSEVLLRLRTENNQLISPARFLGVAEHYNL 90 Query: 554 SSSIDMWVIEHTLQFMAENRAK-MPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQ 612 SS I+ VI + +A+ + HRF+INLSP + R + ++++++ Sbjct: 91 SSQIERRVITTLFEQLAQAPTHILENHRFSINLSPAYLRDDRLFEYIHAQVSEFELSPDL 150 Query: 613 LIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSF 672 + FE++E AL N++ A + LQ G A+DD G+ +S+ LK + D LKI F Sbjct: 151 ICFEISERLALENLRLASDVITDLQTRGYCCALDDCGSNMSSFTYLKYLPVDYLKISERF 210 Query: 673 IRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQP 732 ++ + + D IV I +L + + V+A+ VENEEI V +LG+DY QGY + +P+ Sbjct: 211 VKKMGQDITDKAIVELINYLGQSMGLQVIAKGVENEEIFNEVKALGLDYAQGYYLSQPKK 270 Query: 733 L 733 + Sbjct: 271 M 271 >UniRef50_B1Y791 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y791_LEPCP Length = 1066 Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 126/461 (27%), Positives = 218/461 (47%), Gaps = 38/461 (8%) Query: 309 VNYMAVLA--TRQRAVVRRIQRLAYVDPVVHLPN--------VRALNRALRDAPWSALCY 358 +Y++V T Q+ +R+Q LA+ DP+ LPN A+ A R A+ + Sbjct: 605 THYVSVFTDITPQKEAEQRLQHLAHFDPLTQLPNRLMVLSRLEHAIASAARAERRVAVLF 664 Query: 359 LRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLN-------- 410 + + + + + G + ++ L + + +L G++ L L Sbjct: 665 IDLDNFKTVNDSLGHSAGDDLLRAVADRLGTRTRREDTLGRLGGDEFILMLEHLREPQDA 724 Query: 411 TESHQERITALDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSI 470 + QE I L++ FR + +Q IG+S P + L +GEL A+ ++ Sbjct: 725 AQVAQELIGLLET---PFRVAGQEVYVQASIGISLY----PDDG--LEVGELVRDADAAM 775 Query: 471 --VTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGM--RGDVYHE 526 A + R L + ++A+ RL++ALE+ F L QP+ + R + E Sbjct: 776 YQAKRAGRGVYRFYTESLTTAAQSRLALDTRLRRALENKEFVLWYQPLYRLADRCLIGLE 835 Query: 527 ILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRA----KMPAHRFA 582 L+R+ I P F+P+ E G +++ WV + + + RA + R A Sbjct: 836 ALVRLNQPGLPPIGPAEFIPLLEETGQITTLGAWVTQEACR---QGRAWLDEGLDFGRIA 892 Query: 583 INLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQ 642 INLSP + + + V + L + + A +L E+TES + ++A+ L L+ LG + Sbjct: 893 INLSPQEIRRGQTDERVREALERSGLPAERLELELTESGLMEQGERAEAFLHRLRALGVR 952 Query: 643 IAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVA 702 +AIDDFGTGY+S A LK LKID SF+R++ +++ D Q+V ++ + R + V+A Sbjct: 953 LAIDDFGTGYSSLAYLKRFPVSKLKIDRSFVRDLPADANDAQLVQTMVSMGRNLGISVLA 1012 Query: 703 EYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPI 743 E VE E + + SLG D QGY P+P + + + P+ Sbjct: 1013 EGVETEAQFDYLRSLGCDAAQGYFFSPPRPADEARHWLRPL 1053 >UniRef50_Q2RQN5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RQN5_RHORT Length = 820 Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 123/445 (27%), Positives = 203/445 (45%), Gaps = 27/445 (6%) Query: 310 NYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRDAPWSALCYLRIPGMEMLVK 369 N + T ++A++ R+ LA DP+ L N R+ L A A R P + V Sbjct: 356 NALIADVTDRKAMIDRLTFLAQRDPLTGLINRRSFFDDLEKAVARAG---RFPAAGVAVI 412 Query: 370 NYGIMLRIQY-KQKLSHWLSPLL--EPGEDVY----------QLSGNDLALRL---NTES 413 + + R +Y L H L E E ++ +L G++ A+ L N E Sbjct: 413 SIDLD-RFKYVNDSLGHQAGDCLLKEVAEVLFGRLRETDLLARLGGDEFAVLLHGVNREG 471 Query: 414 HQERITALDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTN 473 AL L + F +DG ++ + + V+ LL + L+ Sbjct: 472 ALHVAEALRLCLADYAFSYDGKSVEIGCSLGVATWAADVDDPEDLLARADMAMRLA--KR 529 Query: 474 APEN---MQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEIL 528 A N + G + ++ + + + L +N F + QPI + V HE L Sbjct: 530 AGRNRVHLFEEGDLEVRARVVADAGYSKLIDRGLRNNLFRPVFQPIIDVTSGAVVGHETL 589 Query: 529 LRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPT 588 R+ ++ D +PVA FGL+ ID +I + +AE+ + + NLS Sbjct: 590 ARLHDPAAIGLTMDVLIPVAERFGLAVEIDRQIILAVTEALAEDAGWLEGGFLSFNLSAQ 649 Query: 589 SVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDF 648 SV R V +L+A ++ LIFE+TE+ A+ ++ A+ L+ L +LGC+ A+DDF Sbjct: 650 SVGDGRIFSAVRRLIATRRLPPQALIFEITETAAIASLAAARTFLKALTDLGCKTALDDF 709 Query: 649 GTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENE 708 G+GY+S+ L+ + D LKIDG ++R+I + + +V +I +A M +AE VE Sbjct: 710 GSGYSSFTYLRELPVDFLKIDGRYVRDIHHDPVKAAMVQAINTVAHAMGMRTIAECVEEA 769 Query: 709 EIREAVLSLGIDYMQGYLIGKPQPL 733 E + G+D QG+L G+P PL Sbjct: 770 SGLEVLRQSGVDCAQGFLFGRPAPL 794 >UniRef50_A4C9D0 Putative Sensory box protein n=2 Tax=Proteobacteria RepID=A4C9D0_9GAMM Length = 1503 Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 121/451 (26%), Positives = 207/451 (45%), Gaps = 40/451 (8%) Query: 308 IVNYMAVLA--TRQRAVVRRIQRLAYVDPVVHLPN--------VRALNRALRDAPWSALC 357 I NY+ V+ + Q+ + ++ LA D + LPN A + R AL Sbjct: 1049 INNYIVVITDISEQKDAEKELRVLANYDTLTKLPNRSLLLDRISHATELSRRHKNRLALL 1108 Query: 358 YLRIPGM----EMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTES 413 ++ + + L + G L I Q+L + L + V +L G++ + + Sbjct: 1109 FIDLDHFKQVNDTLGHDLGDTLLITVAQRLKYGL----RKQDTVARLGGDEFVILI---- 1160 Query: 414 HQERITALDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTN 473 E I +D + R + + + Q+G V + N++ L Sbjct: 1161 --EDIDTIDELIPVCRKICEEVSLPVQLGNHRMTVEPSIGVAIFPDDADNSLDLLKSADI 1218 Query: 474 APENMQRRGAMYLQ-------RELKDKVAMMNRLQQALEHNHFFLMAQPITG-----MRG 521 A + ++RG Q +++ KV + N L++A++ N F QPI ++G Sbjct: 1219 AMYHAKKRGGATYQFFHQEMNHKIQRKVQLENELKEAVKLNQFVNYYQPIISATDFTLKG 1278 Query: 522 DVYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRF 581 E+LLR + +N +LISP F+PVA GL +++ + +Q + P Sbjct: 1279 ---FEVLLRWRQDN-KLISPAEFIPVAESMGLITTLTFAALTRAMQDLKAWLVSKPDCYV 1334 Query: 582 AINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGC 641 ++NLS +++ ++ + I Q++FE+TES + + ++A + L++ GC Sbjct: 1335 SVNLSARDFEHETIGEKLTDIILQADISPTQVVFEITESALMQDSQKALEAMLILKQKGC 1394 Query: 642 QIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVV 701 +I +DDFGTGY+S + LK D+LKID SF+ +I ++ D I+ S LA V Sbjct: 1395 RIYMDDFGTGYSSLSYLKRFPIDVLKIDQSFVADIGQDASDEAIIHSTLALAHSLGKSCV 1454 Query: 702 AEYVENEEIREAVLSLGIDYMQGYLIGKPQP 732 AE VE + E + LG DY+QGYL KP P Sbjct: 1455 AEGVETKAQVEFLQMLGCDYLQGYLFSKPVP 1485 >UniRef50_C8XJV3 Diguanylate cyclase/phosphodiesterase with GAF sensor n=2 Tax=Nakamurella multipartita DSM 44233 RepID=C8XJV3_NAKMY Length = 659 Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 132/491 (26%), Positives = 221/491 (45%), Gaps = 40/491 (8%) Query: 266 ISLLWAVVLMISIHSYQNYIPIYPGYTT--QLTITSSSYLVFSFIVNYMAVLATRQRAVV 323 I + AVV M+ H + G+ T + + +A L R A Sbjct: 127 IGVSLAVVPMLGTHDTMGVL----GFVKYGDREWTDAEINALRAVAGLLAQLQARVDAE- 181 Query: 324 RRIQRLAYVDPVVHLPNVRALNRAL--RDAPWSA----LCYLRIPGMEMLVKNYGIMLRI 377 R++ A+ D + L N R L + R P + L ++ + ++ L +G Sbjct: 182 ERLRHQAFHDELTDLANRRFLVEEITQRLEPGTGDPVGLIFMDVDRLKALNSFFGHAAGD 241 Query: 378 QYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLKQFRFFWDGMPM 437 QY Q L+ L + V +L G++ + + + + AL L+Q + Sbjct: 242 QYLQILAGRLRERISARHMVARLGGDEFVVIMGGPTDEATARALAEKLRQ-------VAN 294 Query: 438 QPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENM---QRRGA---------MY 485 QP I V V V+ I + LG+ + ++ A + M + RG M Sbjct: 295 QP-ILVGGEEVSRAVS-IGVALGQPGQTSASELMNQADQAMLEAKSRGGNEIGVFSAQMR 352 Query: 486 LQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMR-GDVYH-EILLRMKGENDELISPDS 543 E++ + + + A+ H L QP +R G + E L+R L+ P + Sbjct: 353 RANEIRTDIEL--HIGTAIRHGALVLHYQPEVDLRDGRILGVEALVRWPNPTLGLLQPGA 410 Query: 544 FLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRF--AINLSPTSVCQARFPVEVSQ 601 F+ V L+ + WV+ + + E + P R ++N+SP + F V++ Sbjct: 411 FIDVVEATNLAGELGRWVLGQACRQLREWQLHYPERRLGMSVNVSPAQLITLDFVATVAK 470 Query: 602 LLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNV 661 LA ++++ L E+TE + + QA TL+ LQ +G +IAIDDFGTGY+S+A+LK++ Sbjct: 471 TLADHELDGQWLTLEITEQALVRDTDQALATLRGLQRIGVKIAIDDFGTGYSSFAQLKSL 530 Query: 662 NADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDY 721 AD+LKID F+R++ ++ D IV SI LAR + +VAE VE E ++ LG Sbjct: 531 PADVLKIDRGFVRDLGTDFDDLAIVQSIIGLARSLGLDLVAEGVETEIAASTLVDLGCTR 590 Query: 722 MQGYLIGKPQP 732 QG+L P+P Sbjct: 591 AQGFLFAGPRP 601 >UniRef50_B3PHR1 Hipothetical sensory box/GGDEF family protein n=3 Tax=Bacteria RepID=B3PHR1_CELJU Length = 688 Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 117/442 (26%), Positives = 215/442 (48%), Gaps = 34/442 (7%) Query: 319 QRAVVRRIQRLAYVDPVVHLPNVRALN--------RALRDAPWSALCYLRIPGMEMLVKN 370 +R + R+ LA D V L N AL R + +A + I ++ ++ Sbjct: 235 RRYMQDRLNYLATHDFVTRLHNRNALESHVSELLARTQLHSINAAFLLIDIDRFRIVNES 294 Query: 371 YGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITA---LDSHLKQ 427 G + + ++ + ++ LL + +L G+ A+ + E + + + HL+Q Sbjct: 295 CGCIAGDELLRQFADSITGLLARNDFFARLGGDKFAVVTHCEEADKGVALAQLIQRHLEQ 354 Query: 428 FRFFWDGMPMQPQIGVSYCYV-RSPVNHIYLLLGELNTV------AELSIVTNAPENMQR 480 F F W+ + ++ + R V++ ++L + A SI T N + Sbjct: 355 FTFQWEDKQFKLAASIACVPITRELVSYDQIMLAADEVIYVAKQEARGSIRTYDQAN--Q 412 Query: 481 RGAMYLQRELKDKVAMMNRLQQALEHNHF---FLMAQPITGMRGD----VYHEILLRM-K 532 R +++ +D + +RL AL +N F F + + + R + + EILLR+ Sbjct: 413 RSSLH-----RDSINWASRLIDALHNNLFRTYFQLIEYLPASRAEDIPKIRLEILLRLWS 467 Query: 533 GENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAE-NRAKMPAHRFAINLSPTSVC 591 + + ++ P F+ A L +D WVI H+LQ +A+ R +INLS S+ Sbjct: 468 PQQERIVPPGDFIGPAERLHLIPELDKWVINHSLQLLAQYPRLFDHIELVSINLSALSMR 527 Query: 592 QARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTG 651 ++ F V + ++ I ++ FE+TE+ A+ N+ A+ +Q L++ GC A+DDFG+G Sbjct: 528 ESLFADYVVGKIQQHGIPPHKICFEITETAAIVNMDTARHFMQTLRDQGCHFALDDFGSG 587 Query: 652 YASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIR 711 +ASYA L + D +KIDG F+R++ ++ Y +V SI +A+ V+AE+VE E+ Sbjct: 588 FASYAYLHQLIFDKIKIDGIFVRDMDTDQAHYAMVKSIIEMAKSLDKEVIAEFVETPEVA 647 Query: 712 EAVLSLGIDYMQGYLIGKPQPL 733 + + LG+ + QGY +P+ L Sbjct: 648 QLLRELGVSWGQGYFHHRPEEL 669 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P77172 Inner membrane protein yfgF n=114 Tax=Enterobact... 949 0.0 UniRef50_A8GHP9 Diguanylate cyclase/phosphodiesterase n=1 Tax=Se... 701 0.0 UniRef50_B2VE87 Inner membrane protein YfgF n=3 Tax=Erwinia RepI... 673 0.0 UniRef50_C1MAR9 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ci... 621 e-176 UniRef50_C5V3L4 Diguanylate cyclase/phosphodiesterase with PAS/P... 590 e-167 UniRef50_P23842 Uncharacterized protein yfeA n=98 Tax=Enterobact... 589 e-166 UniRef50_A1K3A1 GGEF/EAL/PAS/PAC-domain containing protein n=1 T... 580 e-164 UniRef50_Q5P4W8 Putative uncharacterized protein n=2 Tax=Proteob... 576 e-162 UniRef50_C1M7D0 Putative uncharacterized protein n=1 Tax=Citroba... 575 e-162 UniRef50_C6P1A0 Diguanylate cyclase/phosphodiesterase with PAS/P... 575 e-162 UniRef50_C5V1H2 Diguanylate cyclase/phosphodiesterase with PAS/P... 572 e-161 UniRef50_C6P1Q1 Diguanylate cyclase/phosphodiesterase with PAS/P... 565 e-159 UniRef50_C6NZE4 Diguanylate cyclase/phosphodiesterase with PAS/P... 565 e-159 UniRef50_B9YY70 Diguanylate cyclase/phosphodiesterase with PAS/P... 564 e-159 UniRef50_C5S5K8 Response regulator receiver modulated diguanylat... 564 e-159 UniRef50_C1DBY5 Diguanylate cyclase/phosphodiesterase with PAS/P... 561 e-158 UniRef50_C5V1I4 Diguanylate cyclase/phosphodiesterase with PAS/P... 561 e-158 UniRef50_C6ME82 Response regulator receiver modulated diguanylat... 560 e-158 UniRef50_C6WTL1 Diguanylate cyclase/phosphodiesterase with PAS/P... 560 e-158 UniRef50_C7RS22 Diguanylate cyclase/phosphodiesterase with PAS/P... 560 e-158 UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/P... 559 e-157 UniRef50_C5V7A4 Diguanylate cyclase/phosphodiesterase with PAS/P... 558 e-157 UniRef50_C6NZZ7 Diguanylate cyclase/phosphodiesterase with PAS/P... 557 e-157 UniRef50_A1TX84 Response regulator receiver modulated diguanylat... 557 e-157 UniRef50_Q3A4W5 Response regulator receiver modulated diguanylat... 555 e-156 UniRef50_C6P6Y2 Diguanylate cyclase/phosphodiesterase with PAS/P... 555 e-156 UniRef50_Q3JAR2 Diguanylate cyclase/phosphodiesterase with PAS/P... 555 e-156 UniRef50_C9Y9D8 Putative uncharacterized protein n=1 Tax=Curviba... 555 e-156 UniRef50_Q0AIX2 Diguanylate cyclase/phosphodiesterase with PAS/P... 555 e-156 UniRef50_A1KAZ1 Hypothetical signaling protein n=1 Tax=Azoarcus ... 553 e-156 UniRef50_Q2W807 Predicted signal transduction protein n=4 Tax=Ma... 553 e-155 UniRef50_C0Z6C0 Probable signaling protein n=1 Tax=Brevibacillus... 552 e-155 UniRef50_A6T0F0 Sensory box/GGDEF family protein n=2 Tax=Oxaloba... 552 e-155 UniRef50_C6P6N2 Diguanylate cyclase/phosphodiesterase with PAS/P... 552 e-155 UniRef50_Q478F7 Diguanylate cyclase/phosphodiesterase with PAS/P... 550 e-155 UniRef50_A1K5K2 Conserved hypothetical signaling protein n=2 Tax... 550 e-155 UniRef50_B1Y791 Diguanylate cyclase/phosphodiesterase with PAS/P... 550 e-155 UniRef50_A0L9S8 Diguanylate cyclase/phosphodiesterase with PAS/P... 550 e-155 UniRef50_Q2YCL1 Diguanylate cyclase/phosphodiesterase with PAS/P... 549 e-154 UniRef50_C9P6X4 Diguanylate cyclase/phosphodiesterase with PAS/P... 549 e-154 UniRef50_Q2BR92 Putative uncharacterized protein n=1 Tax=Neptuni... 549 e-154 UniRef50_A0L2H7 Diguanylate cyclase/phosphodiesterase with PAS/P... 548 e-154 UniRef50_B9LZ98 Diguanylate cyclase/phosphodiesterase with PAS/P... 547 e-154 UniRef50_Q7P0M4 Putative uncharacterized protein n=1 Tax=Chromob... 547 e-154 UniRef50_B9Z1R5 Diguanylate cyclase/phosphodiesterase with PAS/P... 547 e-154 UniRef50_B3PKJ2 EAL domain protein n=1 Tax=Cellvibrio japonicus ... 547 e-154 UniRef50_Q1JY96 Diguanylate cyclase/phosphodiesterase with PAS/P... 547 e-154 UniRef50_B3EBJ5 Diguanylate cyclase/phosphodiesterase with PAS/P... 546 e-153 UniRef50_Q39X25 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ge... 546 e-153 UniRef50_A0LD38 Diguanylate cyclase/phosphodiesterase with PAS/P... 544 e-153 UniRef50_C6WZ79 Diguanylate cyclase/phosphodiesterase with PAS/P... 543 e-153 UniRef50_B9YZ47 Diguanylate cyclase/phosphodiesterase with PAS/P... 543 e-153 UniRef50_Q2YC85 Diguanylate cyclase/phosphodiesterase with PAS/P... 543 e-152 UniRef50_Q2BMA7 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesari... 543 e-152 UniRef50_Q1NJA1 PAS:GGDEF:EAL n=7 Tax=delta proteobacterium MLMS... 543 e-152 UniRef50_C7RVM5 Response regulator receiver modulated diguanylat... 543 e-152 UniRef50_C5V0L7 Diguanylate cyclase/phosphodiesterase with PAS/P... 541 e-152 UniRef50_C6WVK9 Diguanylate cyclase/phosphodiesterase with PAS/P... 541 e-152 UniRef50_Q1K2Z8 Diguanylate cyclase/phosphodiesterase with PAS/P... 540 e-152 UniRef50_A6F7G4 PAS sensor diguanylate cyclase and phophodiester... 539 e-151 UniRef50_C5V4D8 Diguanylate cyclase/phosphodiesterase with PAS/P... 539 e-151 UniRef50_B1XZA8 Diguanylate cyclase/phosphodiesterase with PAS/P... 539 e-151 UniRef50_C6XAD3 Diguanylate cyclase/phosphodiesterase with PAS/P... 539 e-151 UniRef50_D0IUW1 Diguanylate cyclase/phosphodiesterase with n=3 T... 538 e-151 UniRef50_Q479L8 Diguanylate cyclase/phosphodiesterase with PAS/P... 538 e-151 UniRef50_C6XAG8 Diguanylate cyclase/phosphodiesterase with PAS/P... 538 e-151 UniRef50_A4Y0E0 Diguanylate cyclase/phosphodiesterase with PAS/P... 537 e-151 UniRef50_A3JCF9 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 536 e-150 UniRef50_Q2SFK1 FOG: EAL domain n=1 Tax=Hahella chejuensis KCTC ... 536 e-150 UniRef50_B8GT56 Diguanylate cyclase/phosphodiesterase with PAS/P... 536 e-150 UniRef50_B0C6M6 PAS sensor diguanylate cyclase/phophodiesterase,... 535 e-150 UniRef50_Q31GA6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 535 e-150 UniRef50_A4G3M6 Putative two-component response regulator n=1 Ta... 534 e-150 UniRef50_C6X7I8 Response regulator receiver modulated diguanylat... 533 e-150 UniRef50_B8GTY7 Diguanylate cyclase/phosphodiesterase with PAS/P... 533 e-149 UniRef50_A1ATC4 Periplasmic sensor diguanylate cyclase/phosphodi... 533 e-149 UniRef50_Q1NRJ4 PAS:GGDEF:EAL:GAF n=5 Tax=Deltaproteobacteria Re... 533 e-149 UniRef50_B8GSV3 Signal transduction protein containing a membran... 532 e-149 UniRef50_D1T3A4 Diguanylate cyclase/phosphodiesterase with PAS/P... 532 e-149 UniRef50_A5GBG4 Response regulator receiver modulated diguanylat... 532 e-149 UniRef50_B9M1S6 Diguanylate cyclase/phosphodiesterase with PAS/P... 531 e-149 UniRef50_C1DD31 Predicted signal transduction protein containing... 530 e-149 UniRef50_C0N6D3 Putative uncharacterized protein n=1 Tax=Methylo... 530 e-149 UniRef50_C6MIL1 Diguanylate cyclase/phosphodiesterase with PAS/P... 530 e-149 UniRef50_B9Z192 Diguanylate cyclase/phosphodiesterase with PAS/P... 530 e-148 UniRef50_C4L9X9 Diguanylate cyclase/phosphodiesterase with PAS/P... 529 e-148 UniRef50_Q607T2 Sensory box protein/GGDEF domain protein n=2 Tax... 529 e-148 UniRef50_C1DA12 Sensory box/GGDEF family protein n=1 Tax=Laribac... 529 e-148 UniRef50_A3JAM8 Response regulator receiver modulated diguanylat... 528 e-148 UniRef50_C6P6X8 Diguanylate cyclase/phosphodiesterase with PAS/P... 527 e-148 UniRef50_Q21SH7 Diguanylate cyclase/phosphodiesterase with PAS/P... 527 e-148 UniRef50_Q3J9L4 Diguanylate cyclase/phosphodiesterase with PAS/P... 527 e-148 UniRef50_Q7NZ89 Putative uncharacterized protein n=1 Tax=Chromob... 527 e-148 UniRef50_A0YLL7 Putative uncharacterized protein n=1 Tax=Lyngbya... 527 e-148 UniRef50_Q88M14 Sensory box protein/GGDEF family protein n=23 Ta... 526 e-147 UniRef50_Q3SIU2 Putative diguanylate cyclase/phosphodiesterase (... 526 e-147 UniRef50_D2LQL8 Diguanylate cyclase/phosphodiesterase with PAS/P... 524 e-147 UniRef50_A4U4T7 Two-component sensory box protein n=3 Tax=Magnet... 524 e-147 UniRef50_C6WW34 Response regulator receiver modulated diguanylat... 524 e-147 UniRef50_A3J8I8 Diguanylate cyclase/phosphodiesterase with PAS/P... 524 e-147 UniRef50_C1DB08 Predicted signal transduction protein containing... 523 e-147 UniRef50_Q5P8Z7 Sensory box/GGDEF family protein n=3 Tax=cellula... 523 e-147 UniRef50_B8HWB1 Diguanylate cyclase/phosphodiesterase with FHA a... 523 e-146 UniRef50_C6XCZ6 Diguanylate cyclase/phosphodiesterase with PAS/P... 523 e-146 UniRef50_A0Y401 PAS sensor diguanylate cyclase/phophodiesterase ... 523 e-146 UniRef50_Q1NQ51 PAS:GGDEF:EAL n=1 Tax=delta proteobacterium MLMS... 522 e-146 UniRef50_B5JW24 PAS sensor diguanylate cyclase and phophodiester... 522 e-146 UniRef50_B7GKR7 Multidomain signal transduction protein (Contain... 522 e-146 UniRef50_D1C8G6 Diguanylate cyclase/phosphodiesterase with PAS/P... 522 e-146 UniRef50_D1AZY7 Diguanylate cyclase n=1 Tax=Sulfurospirillum del... 522 e-146 UniRef50_B7KGZ9 Response regulator receiver modulated diguanylat... 522 e-146 UniRef50_C6MBX5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ni... 522 e-146 UniRef50_C0N6D2 Putative uncharacterized protein n=1 Tax=Methylo... 521 e-146 UniRef50_A0LA87 Diguanylate cyclase/phosphodiesterase with PAS/P... 521 e-146 UniRef50_A7K0U5 Sensory box/GGDEF family protein n=14 Tax=Vibrio... 521 e-146 UniRef50_Q1JXC9 Diguanylate cyclase/phosphodiesterase with PAS/P... 520 e-146 Sequences not found previously or not previously below threshold: UniRef50_Q47GC0 Diguanylate cyclase/phosphodiesterase with PAS/P... 587 e-166 UniRef50_A1SZA9 Diguanylate cyclase/phosphodiesterase with PAS/P... 573 e-162 UniRef50_C6X6V4 Diguanylate cyclase/phosphodiesterase with PAS/P... 572 e-161 UniRef50_C7RMB6 Diguanylate cyclase/phosphodiesterase with PAS/P... 568 e-160 UniRef50_C5V5K2 Diguanylate cyclase/phosphodiesterase with PAS/P... 566 e-159 UniRef50_Q47IA0 Diguanylate cyclase/phosphodiesterase with PAS/P... 562 e-158 UniRef50_C7RNA9 Diguanylate cyclase/phosphodiesterase with PAS/P... 561 e-158 UniRef50_C7RJ77 Diguanylate cyclase/phosphodiesterase with PAS/P... 560 e-158 UniRef50_C4K931 Diguanylate cyclase/phosphodiesterase with PAS/P... 560 e-158 UniRef50_C3X2S2 Diguanylate cyclase/phosphodiesterase with PAS/P... 559 e-157 UniRef50_B2T9B2 Diguanylate cyclase/phosphodiesterase with PAS/P... 558 e-157 UniRef50_A1K4Z0 EAL/GGDEF/PAS/PAC-domain containing signalling p... 558 e-157 UniRef50_Q47BF2 Diguanylate cyclase/phosphodiesterase with PAS/P... 557 e-157 UniRef50_Q20JY5 Sensory box/GGDEF family protein n=1 Tax=uncultu... 555 e-156 UniRef50_Q5P4Q9 Putative uncharacterized protein n=1 Tax=Aromato... 554 e-156 UniRef50_Q31GH8 Diguanylate cyclase/phosphodiesterase with PAS/P... 553 e-156 UniRef50_Q3SIW6 Putative diguanylate cyclase/phosphodiesterase (... 553 e-156 UniRef50_A4J477 Diguanylate cyclase/phosphodiesterase with PAS/P... 552 e-155 UniRef50_C6NZ79 Diguanylate cyclase/phosphodiesterase with PAS/P... 552 e-155 UniRef50_Q47A14 Diguanylate cyclase/phosphodiesterase with PAS/P... 552 e-155 UniRef50_Q2W4Z4 Predicted signal transduction protein containing... 551 e-155 UniRef50_Q21SZ9 Diguanylate cyclase/phosphodiesterase with PAS/P... 551 e-155 UniRef50_B7V0E6 Motility regulator n=25 Tax=Pseudomonas RepID=B7... 550 e-155 UniRef50_Q39R25 Diguanylate cyclase/phosphodiesterase with PAS/P... 550 e-155 UniRef50_Q1GXZ6 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 550 e-155 UniRef50_B3E661 Diguanylate cyclase/phosphodiesterase with PAS/P... 547 e-154 UniRef50_A1RPJ9 Diguanylate cyclase/phosphodiesterase with PAS/P... 547 e-154 UniRef50_A0LKD9 Response regulator receiver modulated diguanylat... 547 e-154 UniRef50_C6WUG6 Diguanylate cyclase/phosphodiesterase with PAS/P... 546 e-153 UniRef50_Q5P5U6 Putative uncharacterized protein n=1 Tax=Aromato... 546 e-153 UniRef50_Q608F9 Sensory box protein n=1 Tax=Methylococcus capsul... 544 e-153 UniRef50_C6MMM5 Response regulator receiver modulated diguanylat... 544 e-153 UniRef50_A0L9T5 Diguanylate cyclase/phosphodiesterase with PAS/P... 543 e-153 UniRef50_C5T1I4 Diguanylate cyclase/phosphodiesterase with PAS/P... 543 e-153 UniRef50_Q2BHU8 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesari... 543 e-153 UniRef50_Q21R50 Diguanylate cyclase/phosphodiesterase with PAS/P... 543 e-152 UniRef50_A1KA22 GGDEF/EAL/PAS/PAC/GAF-domain containing protein ... 543 e-152 UniRef50_A1ALY4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pe... 543 e-152 UniRef50_A1TI51 Diguanylate cyclase/phosphodiesterase with PAS/P... 543 e-152 UniRef50_C0ZBT5 Probable signaling protein n=1 Tax=Brevibacillus... 542 e-152 UniRef50_Q2RPL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rh... 542 e-152 UniRef50_C5UZT1 Diguanylate cyclase/phosphodiesterase with PAS/P... 542 e-152 UniRef50_Q1H367 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 542 e-152 UniRef50_A0KIJ4 MorA n=2 Tax=Aeromonas RepID=A0KIJ4_AERHH 542 e-152 UniRef50_Q47ES6 Diguanylate cyclase/phosphodiesterase with PAS/P... 541 e-152 UniRef50_A6SVJ0 Uncharacterized conserved protein n=4 Tax=Proteo... 541 e-152 UniRef50_B8GMU1 Diguanylate cyclase/phosphodiesterase with PAS/P... 540 e-152 UniRef50_Q47IR9 Diguanylate cyclase/phosphodiesterase with PAS/P... 540 e-152 UniRef50_A4G4R7 Putative uncharacterized protein n=1 Tax=Hermini... 540 e-152 UniRef50_C6NZD9 Diguanylate cyclase/phosphodiesterase with PAS/P... 540 e-152 UniRef50_A0L8P4 Response regulator receiver modulated diguanylat... 540 e-152 UniRef50_A0LAF7 Diguanylate cyclase/phosphodiesterase with PAS/P... 540 e-152 UniRef50_A8FYM5 Signal transduction protein containing a membran... 540 e-152 UniRef50_Q2W1Z2 Hypothetical 1041 kDa protein in hypE 3'region n... 540 e-151 UniRef50_C6P1Y8 Diguanylate cyclase/phosphodiesterase with PAS/P... 539 e-151 UniRef50_C5V280 Diguanylate cyclase/phosphodiesterase with PAS/P... 539 e-151 UniRef50_A1K5Q6 GGDEF/EAL/PAC/PAS-domain containing protein n=1 ... 538 e-151 UniRef50_C9YA12 Uncharacterized signaling protein PA1727 n=1 Tax... 538 e-151 UniRef50_C6P3H6 Diguanylate cyclase/phosphodiesterase with PAS/P... 537 e-151 UniRef50_Q3SK01 Putative diguanylate cyclase/phosphodiesterase (... 537 e-151 UniRef50_C5JAR6 Conserved uncharacterized protein n=1 Tax=uncult... 537 e-151 UniRef50_Q47FU0 Diguanylate cyclase/phosphodiesterase with PAS/P... 536 e-150 UniRef50_C6X9G9 Diguanylate cyclase/phosphodiesterase with PAS/P... 535 e-150 UniRef50_C5D2J8 Diguanylate cyclase/phosphodiesterase with PAS/P... 535 e-150 UniRef50_C6P464 Diguanylate cyclase/phosphodiesterase with PAS/P... 534 e-150 UniRef50_A1TLA6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ac... 534 e-150 UniRef50_Q1K3I2 Diguanylate cyclase/phosphodiesterase with PAS/P... 534 e-150 UniRef50_B1XZW3 Diguanylate cyclase/phosphodiesterase with PAS/P... 534 e-150 UniRef50_Q21WS3 Diguanylate cyclase/phosphodiesterase with PAS/P... 534 e-150 UniRef50_A3DCG7 Diguanylate cyclase/phosphodiesterase with PAS/P... 534 e-150 UniRef50_A1ASK8 Response regulator receiver modulated diguanylat... 533 e-150 UniRef50_C6P3H7 Diguanylate cyclase/phosphodiesterase with PAS/P... 533 e-150 UniRef50_C6BWZ0 Diguanylate cyclase/phosphodiesterase with PAS/P... 533 e-150 UniRef50_B3PHI4 Sensory box/GGDEF family protein n=1 Tax=Cellvib... 533 e-149 UniRef50_Q1H3Y9 Diguanylate cyclase/phosphodiesterase with PAS/P... 533 e-149 UniRef50_D1U882 Diguanylate cyclase/phosphodiesterase with PAS/P... 533 e-149 UniRef50_B9ZNS8 Diguanylate cyclase/phosphodiesterase with PAS/P... 532 e-149 UniRef50_C6P5X9 Diguanylate cyclase/phosphodiesterase with PAS/P... 532 e-149 UniRef50_Q2SF23 Predicted signal transduction protein containing... 532 e-149 UniRef50_B3PCE8 Sensory box/GGDEF family protein n=2 Tax=Gammapr... 532 e-149 UniRef50_A4TX60 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswalden... 532 e-149 UniRef50_C0INC4 GGDEF family protein n=1 Tax=uncultured bacteriu... 532 e-149 UniRef50_Q21XK7 Response regulator receiver modulated diguanylat... 531 e-149 UniRef50_Q60BD0 Sensory box protein n=1 Tax=Methylococcus capsul... 530 e-149 UniRef50_Q3A628 Diguanylate cyclase/phosphodiesterase with PAS/P... 530 e-149 UniRef50_Q1PY13 Putative uncharacterized protein n=1 Tax=Candida... 530 e-149 UniRef50_Q74A79 Sensory box/GGDEF family protein n=1 Tax=Geobact... 530 e-149 UniRef50_C6ML43 Response regulator receiver modulated diguanylat... 529 e-148 UniRef50_A1K5S9 GGDEF/EAL-domain containing protein n=1 Tax=Azoa... 529 e-148 UniRef50_Q47ED8 Response regulator receiver modulated diguanylat... 529 e-148 UniRef50_B5E7Y8 Response regulator receiver modulated diguanylat... 529 e-148 UniRef50_Q2W154 Putative uncharacterized protein n=2 Tax=Magneto... 529 e-148 UniRef50_C4L987 Diguanylate cyclase/phosphodiesterase with PAS/P... 529 e-148 UniRef50_Q5P4K8 Putative sensory box/GGDEF family protein n=1 Ta... 529 e-148 UniRef50_Q0ACK6 Diguanylate cyclase/phosphodiesterase with PAS/P... 529 e-148 UniRef50_C4ZM30 Diguanylate cyclase/phosphodiesterase with PAS/P... 528 e-148 UniRef50_A0L8C6 Response regulator receiver modulated diguanylat... 528 e-148 UniRef50_Q7NYX4 Putative uncharacterized protein n=1 Tax=Chromob... 528 e-148 UniRef50_A6WKV6 Diguanylate cyclase/phosphodiesterase with PAS/P... 528 e-148 UniRef50_A1W8G6 Diguanylate cyclase/phosphodiesterase n=7 Tax=Co... 528 e-148 UniRef50_B2JN77 Diguanylate cyclase/phosphodiesterase with PAS/P... 528 e-148 UniRef50_B8H3B9 Sensory box/GGDEF family protein n=5 Tax=Cauloba... 527 e-148 UniRef50_B6AQA1 Diguanylate cyclase/phosphodiesterase n=2 Tax=Le... 527 e-148 UniRef50_A1SY75 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ps... 527 e-148 UniRef50_B2JCW5 Diguanylate cyclase/phosphodiesterase with PAS/P... 527 e-148 UniRef50_B8KF61 Ggef/eal/pas/pac-domain containing protein n=1 T... 526 e-147 UniRef50_C5S8G6 Diguanylate cyclase/phosphodiesterase with PAS/P... 526 e-147 UniRef50_Q47FQ3 Diguanylate cyclase/phosphodiesterase with PAS/P... 526 e-147 UniRef50_Q3JBM4 Sensor protein n=4 Tax=Bacteria RepID=Q3JBM4_NITOC 526 e-147 UniRef50_A1STH5 Diguanylate cyclase/phosphodiesterase with PAS/P... 526 e-147 UniRef50_A6T1A8 Sensory box/GGDEF family protein n=1 Tax=Janthin... 526 e-147 UniRef50_A1WEV3 Diguanylate cyclase/phosphodiesterase with PAS/P... 525 e-147 UniRef50_C5V567 Diguanylate cyclase/phosphodiesterase with PAS/P... 525 e-147 UniRef50_C7RQ11 Response regulator receiver modulated diguanylat... 525 e-147 UniRef50_B4AX01 Diguanylate cyclase/phosphodiesterase with PAS/P... 525 e-147 UniRef50_B4B341 Diguanylate cyclase/phosphodiesterase with PAS/P... 525 e-147 UniRef50_B7HSZ4 Response regulator receiver modulated diguanylat... 524 e-147 UniRef50_C6E011 Response regulator receiver modulated diguanylat... 524 e-147 UniRef50_A1WHK3 Diguanylate cyclase/phosphodiesterase with PAS/P... 524 e-147 UniRef50_B1Y3M1 Diguanylate cyclase/phosphodiesterase with PAS/P... 524 e-147 UniRef50_Q12GF0 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 524 e-147 UniRef50_Q609J7 Sensory box protein n=1 Tax=Methylococcus capsul... 523 e-147 UniRef50_Q89VU0 Bll0955 protein n=2 Tax=cellular organisms RepID... 523 e-146 UniRef50_Q74FR9 Sensory box/GGDEF family protein n=1 Tax=Geobact... 523 e-146 UniRef50_Q221U3 Diguanylate cyclase/phosphodiesterase with PAS/P... 523 e-146 UniRef50_D2L724 Diguanylate cyclase/phosphodiesterase with PAS/P... 523 e-146 UniRef50_Q2BQI6 Putative uncharacterized protein n=1 Tax=Neptuni... 522 e-146 UniRef50_C5CTK8 Diguanylate cyclase/phosphodiesterase with PAS/P... 522 e-146 UniRef50_C0ZBG1 Probable signaling protein YkoW n=1 Tax=Brevibac... 522 e-146 UniRef50_Q47H73 Diguanylate cyclase/phosphodiesterase with PAS/P... 522 e-146 UniRef50_C7RK65 Diguanylate cyclase/phosphodiesterase with PAS/P... 521 e-146 UniRef50_Q1JX80 Diguanylate cyclase/phosphodiesterase with PAS/P... 521 e-146 UniRef50_Q2Y6N3 Response regulator receiver modulated diguanylat... 521 e-146 UniRef50_A1TZQ7 Diguanylate cyclase/phosphodiesterase with PAS/P... 520 e-146 >UniRef50_P77172 Inner membrane protein yfgF n=114 Tax=Enterobacteriaceae RepID=YFGF_ECOLI Length = 747 Score = 949 bits (2453), Expect = 0.0, Method: Composition-based stats. Identities = 747/747 (100%), Positives = 747/747 (100%) Query: 1 MKLNATYIKIRDKWWGLPLFLPSLILPIFAHINTFAHISSGEVFLFYLPLALMISMMMFF 60 MKLNATYIKIRDKWWGLPLFLPSLILPIFAHINTFAHISSGEVFLFYLPLALMISMMMFF Sbjct: 1 MKLNATYIKIRDKWWGLPLFLPSLILPIFAHINTFAHISSGEVFLFYLPLALMISMMMFF 60 Query: 61 SWAALPGIALGIFVRKYAELGFYETLSLTANFIIIIILCWGGYRVFTPRRNNVSHGDTRL 120 SWAALPGIALGIFVRKYAELGFYETLSLTANFIIIIILCWGGYRVFTPRRNNVSHGDTRL Sbjct: 61 SWAALPGIALGIFVRKYAELGFYETLSLTANFIIIIILCWGGYRVFTPRRNNVSHGDTRL 120 Query: 121 ISQRIFWQIVFPATLFLILFQFAAFVGLLASRENLVGVMPFNLGTLINYQALLVGNLIGV 180 ISQRIFWQIVFPATLFLILFQFAAFVGLLASRENLVGVMPFNLGTLINYQALLVGNLIGV Sbjct: 121 ISQRIFWQIVFPATLFLILFQFAAFVGLLASRENLVGVMPFNLGTLINYQALLVGNLIGV 180 Query: 181 PLCYFIIRVVRNPFYLRSYYSQLKQQVDAKVTKKEFALWLLALGALLLLLCMPLNEKSTI 240 PLCYFIIRVVRNPFYLRSYYSQLKQQVDAKVTKKEFALWLLALGALLLLLCMPLNEKSTI Sbjct: 181 PLCYFIIRVVRNPFYLRSYYSQLKQQVDAKVTKKEFALWLLALGALLLLLCMPLNEKSTI 240 Query: 241 FSTNYTLSLLLPLMMWGAMRYGYKLISLLWAVVLMISIHSYQNYIPIYPGYTTQLTITSS 300 FSTNYTLSLLLPLMMWGAMRYGYKLISLLWAVVLMISIHSYQNYIPIYPGYTTQLTITSS Sbjct: 241 FSTNYTLSLLLPLMMWGAMRYGYKLISLLWAVVLMISIHSYQNYIPIYPGYTTQLTITSS 300 Query: 301 SYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRDAPWSALCYLR 360 SYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRDAPWSALCYLR Sbjct: 301 SYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRDAPWSALCYLR 360 Query: 361 IPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITA 420 IPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITA Sbjct: 361 IPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITA 420 Query: 421 LDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQR 480 LDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQR Sbjct: 421 LDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQR 480 Query: 481 RGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDVYHEILLRMKGENDELIS 540 RGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDVYHEILLRMKGENDELIS Sbjct: 481 RGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDVYHEILLRMKGENDELIS 540 Query: 541 PDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVS 600 PDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVS Sbjct: 541 PDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVS 600 Query: 601 QLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKN 660 QLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKN Sbjct: 601 QLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKN 660 Query: 661 VNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGID 720 VNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGID Sbjct: 661 VNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGID 720 Query: 721 YMQGYLIGKPQPLIDTLNEIEPIRESA 747 YMQGYLIGKPQPLIDTLNEIEPIRESA Sbjct: 721 YMQGYLIGKPQPLIDTLNEIEPIRESA 747 >UniRef50_A8GHP9 Diguanylate cyclase/phosphodiesterase n=1 Tax=Serratia proteamaculans 568 RepID=A8GHP9_SERP5 Length = 750 Score = 701 bits (1810), Expect = 0.0, Method: Composition-based stats. Identities = 319/731 (43%), Positives = 482/731 (65%), Gaps = 8/731 (1%) Query: 10 IRDKWWGLPLFLPSLILPIFAHINTFAHISSGEVFLFYLPLALMISMMMFFSWAALPGIA 69 +R++WWG PL L++P ++ + G+V+L YLPLA I+++M + W ALPGI Sbjct: 21 LRERWWGYPLIWGLLLIPFAGWLSPRIMLPEGKVYLLYLPLAACIALLMVYDWRALPGIT 80 Query: 70 LGIFVRKYAELGFYETLSLTANFIIIIILCWGGYRVFTPRRNNVSHGDTRLISQRIFWQI 129 L I VR + LG + +T+ +++ +ILCW GYR T RR + G L+ R+ W + Sbjct: 81 LAIMVRYASRLGLESGILVTSLYLLCLILCWLGYRSQTQRRWCAAPGVPTLVKARLIWLV 140 Query: 130 VFPATLFLILFQFAAFVGLLASRENLVGVMPFN---LGTLINYQALLVGNLIGVPLCYFI 186 V PA LF+ F V L A + +G+MP N L L+N+QALL+G L +PL YF+ Sbjct: 141 VLPALLFV--FGLKLLVAL-AQLPDELGMMPGNSDYLLALVNFQALLLGCLSAMPLFYFM 197 Query: 187 IRVVRNPFYLRSYYSQLKQQVDAKVTKKEFALWLLALGALLLLLCMPLNEKSTIFSTNYT 246 +R++ P + + + + +++ + KKE +LWLL L +++ LL + + Y Sbjct: 198 LRLLNKPRFALTLWRRFGREMAPQADKKELSLWLLVLVSMVALLSYYAKNSNPLLLGGYG 257 Query: 247 LSLLLPLMMWGAMRYGYKLISLLWAVVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFS 306 L LLLP+M++GAMR+GY+ ++W+ L++ Y Y L + SS +VF+ Sbjct: 258 LILLLPVMLYGAMRFGYQFNCIIWSSSLLVLFFHYPGYAQRDN-LLHNLAVISSMMVVFT 316 Query: 307 FIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRDAPWSALCYLRIPGMEM 366 + M+ L TRQR R Q A DPV+ LPN+RAL R L + S LC+LR+ +++ Sbjct: 317 LCIYLMSALNTRQRLSHARAQSAALQDPVIGLPNLRALKRDLTLSLPSTLCFLRVSELDL 376 Query: 367 LVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLK 426 L +NYG+ LRI++KQ+L+ L +L PGE VY L G DL LR++ E +E++ + L+ Sbjct: 377 LSRNYGMQLRIRFKQQLAALLHQVLAPGEGVYHLPGYDLLLRVDGEDSEEKVLQIYHALE 436 Query: 427 QFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYL 486 +FR W+G+P+ P +G+ YC V + H+YLLLGEL+++AE+S+ + PE++Q G ++ Sbjct: 437 KFRLIWNGLPLHPPLGLGYCSVNADFEHLYLLLGELSSLAEVSLTSGKPESVQN-GGQWV 495 Query: 487 QRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDVYHEILLRMKGENDELISPDSFLP 546 Q E+K KV +++ +Q AL+++ F LMAQPI G+RGD YHEILLRM+ E+ISP+ FLP Sbjct: 496 QEEIKRKVELLHGVQHALDNDGFILMAQPIVGLRGDRYHEILLRMRDTCGEIISPNDFLP 555 Query: 547 VAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKY 606 VAHEFGL+ +D+WV+ +TL+FM RA++P+ RFA+NLSP+S+C+ +V+ LL +Y Sbjct: 556 VAHEFGLAYRLDLWVLRNTLKFMDLYRAELPSARFAVNLSPSSLCRPMLRHDVNSLLEQY 615 Query: 607 QIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLL 666 QIE +QL EVTES+ L + A LQ L+E+GC+IA+DDFGTGYASY RLK + D+L Sbjct: 616 QIEPYQLTLEVTESHLLQDTAYAGANLQALREIGCRIALDDFGTGYASYDRLKMLPVDML 675 Query: 667 KIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYL 726 KIDGSF+R++++N +D+Q++ SIC +ARMK++ +VAEYVE+ E A+ +G+DYMQGY Sbjct: 676 KIDGSFVRDMLTNPVDFQVITSICKVARMKRLAIVAEYVESMEQLVALKGVGVDYMQGYF 735 Query: 727 IGKPQPLIDTL 737 IG+PQPL+ L Sbjct: 736 IGEPQPLLALL 746 >UniRef50_B2VE87 Inner membrane protein YfgF n=3 Tax=Erwinia RepID=B2VE87_ERWT9 Length = 749 Score = 673 bits (1738), Expect = 0.0, Method: Composition-based stats. Identities = 308/736 (41%), Positives = 470/736 (63%) Query: 1 MKLNATYIKIRDKWWGLPLFLPSLILPIFAHINTFAHISSGEVFLFYLPLALMISMMMFF 60 MK K +WWGLPL L ++LP+ + ++ IS G V+L YLP+A+MI+M+M F Sbjct: 1 MKKTRMLEKFTARWWGLPLLLALVMLPVASALSVRLWISDGYVYLIYLPIAMMIAMLMVF 60 Query: 61 SWAALPGIALGIFVRKYAELGFYETLSLTANFIIIIILCWGGYRVFTPRRNNVSHGDTRL 120 W A PGIA+ + + L L F+ + W GYR R +VS G+ Sbjct: 61 DWRAFPGIAVALCFHYLGRYTVPQVLVLVGMFLASLAAGWWGYRTQIKTRWSVSPGELSQ 120 Query: 121 ISQRIFWQIVFPATLFLILFQFAAFVGLLASRENLVGVMPFNLGTLINYQALLVGNLIGV 180 +S R+ W ++ +TLF+IL Q +G+L ++ F+L L+NYQ+LL+ +L V Sbjct: 121 VSIRLIWLVLVISTLFVILTQLVLPIGILPLHYSVFVDDSFSLRALLNYQSLLLASLGTV 180 Query: 181 PLCYFIIRVVRNPFYLRSYYSQLKQQVDAKVTKKEFALWLLALGALLLLLCMPLNEKSTI 240 PL YF +R++RNP ++ ++ ++Q+ A VT +EF LWL+ L +LL++L + + + Sbjct: 181 PLFYFSLRLLRNPRFIIMLKNRCQRQISAGVTWREFLLWLVLLMSLLIMLTLFRANQDNL 240 Query: 241 FSTNYTLSLLLPLMMWGAMRYGYKLISLLWAVVLMISIHSYQNYIPIYPGYTTQLTITSS 300 +T Y L LLLPLM+W A+R+GY SL W ++L++ ++ + L + S+ Sbjct: 241 LTTEYGLPLLLPLMLWAALRFGYLFTSLSWGILLVVLYQLRDRFMDLTVMKPYNLLVISA 300 Query: 301 SYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRDAPWSALCYLR 360 LVF+ ++ M+ ++TRQR ++ R + LA DP++ LPN+RALN+ L S+LC+LR Sbjct: 301 YLLVFTLVILLMSAISTRQRQLLTRAKELALTDPIIGLPNLRALNKDLAFVSCSSLCFLR 360 Query: 361 IPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITA 420 IP ++ L + YG+ LRIQYK+ L+ +L P L GE +YQL G DL +RLN Q RI Sbjct: 361 IPDLDRLSRTYGLRLRIQYKRSLAIYLRPNLFAGESIYQLPGFDLVIRLNHAVLQSRIEE 420 Query: 421 LDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQR 480 L++ +K + WDG+P+ P IG+SYC V +PV H+Y LLGE++ +AE S+ + N+Q+ Sbjct: 421 LEARIKSYHLSWDGLPIHPDIGLSYCTVNTPVLHLYELLGEMSALAETSLRSGHAVNLQQ 480 Query: 481 RGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDVYHEILLRMKGENDELIS 540 + +QR + +K+AM++ +Q AL++ F LM+Q I G+RGD Y+EILLRM E I Sbjct: 481 STNVTVQRHITEKLAMLHDIQFALQNGSFQLMSQKICGVRGDDYYEILLRMVNTQGEYIQ 540 Query: 541 PDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVS 600 P SF+PV EFGL+ +D V+E L+F+ +R ++P RFAINL ++C+ + E++ Sbjct: 541 PASFIPVVQEFGLTWEVDRMVLEQALRFIHRHRDRLPGIRFAINLFAATLCRPQLTEEIA 600 Query: 601 QLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKN 660 L + +E WQLI EV ES L++ +L L++LGC++AIDDFGTGYASY+RLK Sbjct: 601 SSLKTHGVEPWQLIIEVKESPMLSDNSWGNRSLAQLRKLGCRVAIDDFGTGYASYSRLKR 660 Query: 661 VNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGID 720 D+LKIDGSF+RN+++NSLDYQI+ SIC ++R+K+M +VAE+V+ EE+ E + LG+D Sbjct: 661 AQVDMLKIDGSFVRNMLNNSLDYQIIVSICAVSRLKRMQIVAEFVQTEEVAEELRKLGVD 720 Query: 721 YMQGYLIGKPQPLIDT 736 Y+QG ++G P PL D Sbjct: 721 YLQGEIVGMPIPLQDL 736 >UniRef50_C1MAR9 Diguanylate cyclase/phosphodiesterase n=2 Tax=Citrobacter RepID=C1MAR9_9ENTR Length = 736 Score = 621 bits (1603), Expect = e-176, Method: Composition-based stats. Identities = 263/732 (35%), Positives = 410/732 (56%), Gaps = 11/732 (1%) Query: 3 LNATYIKIRDKWWGLPLFLPSLILPIFAHINTFAHISSGEVFLFYLPLALMISMMMFFSW 62 +N+ IK + W LPL LP L P+ ++N ++ +++ + ++ L LA+ + ++ F + Sbjct: 5 INSNTIK-NIREWCLPLVLPGLFYPLAQYLNGYSILNNTILTVYDLKLAVFSAALVLFGF 63 Query: 63 AALPGIALGIFVRKYAELGFYETLSLTANFIIIIILCWGGYRVFTPRRNNVSHGDTRLIS 122 LPG L F+ +G II L + YR FT RR+ VS G ++ Sbjct: 64 RVLPGFLL--FLTVMFVVGPQNERVDALCLIIASTLSYAAYRKFTGRRSCVSFGRIKISF 121 Query: 123 QRIFWQIVFPATLFLILFQFAAFVGLLASRENLVGVMPFNLGTLINYQALLVGNLIGVPL 182 R+ W + L+L+ + A R ++ + +LG L+ Q ++ G L G+PL Sbjct: 122 NRLLWLCGYNVLLYLVFSKLFAMFVAHGQRPDVDNIPALSLGMLVRIQGIINGCLTGIPL 181 Query: 183 CYFIIRVVRNPFYLRSYYSQLKQQVDAKVTKKEFALWLLALGALLLLLCMPLNEKSTIFS 242 Y I R++R P +L ++ + +Q + W + L L+ L P N +F Sbjct: 182 FYKIYRIIRRPSFLLTFLRAIAEQCKGNIGVYGVISWCILLFFLMFFLTSPDNLD--VFF 239 Query: 243 TNYTLSLLLPLMMWGAMRYGYKLISLLWAVVLMISIHSYQNYIPIYPGYTTQLTITSSSY 302 + Y+L LL PLM+WGA++ G+ L+W +VL+I +YI + + S+ Sbjct: 240 SIYSLILLFPLMLWGAIKIGHLFTMLVWTIVLIILGKHNDSYIASDVNFMLHQALVSTLI 299 Query: 303 LVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRDAPWSALCYLRIP 362 VFS + M VLA R + L DP+ + N+RAL L + +C ++IP Sbjct: 300 FVFSLTIVIMGVLAKFTRQRFNQALLLGLTDPMTGMANLRALKTELFTTERATVCLIQIP 359 Query: 363 GMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALD 422 +E+ + YG R +Y++ L+ L L E VY +G DL +RL + ER+ L Sbjct: 360 ELELFSRRYGFHFRARYQKILAEHLRRHLVKSEKVYYHAGYDLLIRLENGT-WERLCDLY 418 Query: 423 SHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRG 482 FR F++ + + G+ YC + + IY L+G+L VA LS+ PEN++ + Sbjct: 419 QAANSFRLFYNNHRLGFRSGLGYCLINDLSDDIYQLVGKLGMVAGLSLTNGRPENLEAQH 478 Query: 483 AMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDV-YHEILLRMKGENDELISP 541 + L + DK + LQ AL++N F LMAQPI G+ YHEIL+RM E E I P Sbjct: 479 SRILGNHIVDKTEIRTALQNALDNNAFVLMAQPIVSTHGEAPYHEILIRMLNERGEFIPP 538 Query: 542 DSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQ 601 +SFLPVAH+ GL+ ID+WVIE+TL+FM + P H F+INL+P +VC++ ++++Q Sbjct: 539 NSFLPVAHDAGLAPDIDLWVIENTLKFMRNH----PQHCFSINLAPVTVCRSNIVMKITQ 594 Query: 602 LLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNV 661 LL Y +E ++IFE+TE++ L++ +Q TL+ +++LGC++AIDDFGTG+AS+ARL N+ Sbjct: 595 LLHDYAVEPQRIIFEITEADTLSDKEQTVETLRLIRQLGCRVAIDDFGTGFASHARLMNI 654 Query: 662 NADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDY 721 AD+LKIDGSFIR I + + Y IV S C +A MKKM VVAE+VEN I+ + + + + Sbjct: 655 EADILKIDGSFIRRITESEISYYIVESFCRVAEMKKMQVVAEFVENATIQACLEKMNVGW 714 Query: 722 MQGYLIGKPQPL 733 +QGY IGKP PL Sbjct: 715 LQGYHIGKPTPL 726 >UniRef50_C5V3L4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V3L4_9PROT Length = 900 Score = 590 bits (1521), Expect = e-167, Method: Composition-based stats. Identities = 129/517 (24%), Positives = 223/517 (43%), Gaps = 36/517 (6%) Query: 254 MMWGAMRYGYKLISLLW-----AVVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFI 308 + + R S +W V I + + IYP + T + + +V +++ Sbjct: 381 RLLSSGRQNASFYSAMWKAINTTGVWEGEIWNRRKNGEIYPEHLTVTAVKDRNGMVTNYV 440 Query: 309 VNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRDA--------PWSALCYLR 360 + T+++A +I+ LA+ DP+ LPN R L L+ A A+ ++ Sbjct: 441 GVLSDL--TQRKAAEEKIENLAFFDPLTKLPNRRLLLDRLKQAMASATRSVTNGAVLFID 498 Query: 361 IPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNT-----ESHQ 415 + + L YG + Q+++ L + G+ V + G++ + L Sbjct: 499 LDNFKALNDTYGHPMGDLLLQQVAKRLVSSVRDGDTVSRFGGDEFVVLLEGFDENPLDAA 558 Query: 416 ERITALDSHL-----KQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSI 470 + + + + + IG + N + EL A++++ Sbjct: 559 SQAETVGEQIFAALRQPYLIGTHEYHGTSSIGATLF------NDKQQSIDELMKQADIAM 612 Query: 471 VTNAPENMQ--RRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITG-MRGDVYHEI 527 E R +Q + + A+ L++A+E++ F L Q R E Sbjct: 613 YQAKKEGRNVLRFFDPQMQETIAKRTALEGDLRKAIENHQFQLHYQIQVDESRHPFGAEA 672 Query: 528 LLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENR--AKMPAHRFAINL 585 L+R ++SPD F+P+A E L I WV+E + + AK ++N+ Sbjct: 673 LIRWFHPEHGMVSPDQFIPLAEESDLILPIGYWVLETACARIQRWQHDAKTSGFVLSVNV 732 Query: 586 SPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAI 645 S Q F +V L+ +Y+I L E+TES L N++ T+ L+ELG + ++ Sbjct: 733 SAKQFRQTDFVNQVQSLIQQYEINPSLLKLELTESMLLDNIEDTIATMSALKELGVKFSL 792 Query: 646 DDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYV 705 DDFGTGY+S LK + D LKID SF+R+I ++ D IV +I +A + V+AE V Sbjct: 793 DDFGTGYSSLQYLKRLPLDQLKIDQSFVRDIAVDASDRAIVRTIIAMAHSLDLDVIAEGV 852 Query: 706 ENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEP 742 E EE ++ + S G QGYL GKP P+ + Sbjct: 853 ETEEQQKHLSSKGCKNFQGYLFGKPVPIEQFETSLRK 889 >UniRef50_P23842 Uncharacterized protein yfeA n=98 Tax=Enterobacteriaceae RepID=YFEA_ECOLI Length = 729 Score = 589 bits (1518), Expect = e-166, Method: Composition-based stats. Identities = 212/724 (29%), Positives = 368/724 (50%), Gaps = 15/724 (2%) Query: 17 LPLFLPSLILPIFAHINTFAHISSGEVFLFYLPLALMISMMMFFSWAALPGIALGIFVRK 76 L L +++ + I+ A I S +FL ++PL +M+S++ F W + + G+F Sbjct: 16 LAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTN 75 Query: 77 Y--AELGFYETLSL--TANFIIIIILCWGGYRVFTPRRNNVSHGDTRLISQRIFWQ-IVF 131 L F +T + + F+++ +++ T R ++ +R + QR+FW +V Sbjct: 76 LWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLT---SRYVWQRLFWLGLVT 132 Query: 132 PATLFLILFQFAAFVGLLASRENLVGVMPFNLGTLINYQALLVGNLIGVPLCYFIIRVVR 191 P + ++ +F G + T+++ +L LI L Y++ R++ Sbjct: 133 PIGIKCSMYLVGSFFDFPLKISTFFGDAD-AIFTVVDLLSLFTAVLIYNMLFYYLTRMIV 191 Query: 192 NPFYLRSYYSQLKQQVDAKVTKKEFALWLLALGALLLLLCMPLNEKSTIFSTNYTLSLLL 251 +P + + + + K + WL AL LLLLLC P F Y + + Sbjct: 192 SPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYEND---FIAGYLVPVFF 248 Query: 252 PLMMWGAMRYGYKLISLLWAVVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNY 311 + G + Y ++L WAV + ++ QN++ L + + FS + Y Sbjct: 249 IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQ-GVETEYSLAFILAVLISFSVCLLY 307 Query: 312 MAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRDAPWSALCYLRIPGMEMLVKNY 371 M + R + RR A DP+ LPN RAL +A + C LRI +E + ++Y Sbjct: 308 MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKSFCCLRIDNLEFMSRHY 367 Query: 372 GIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLKQFRFF 431 G+M+R+ + + L PL++ E +YQL G++L L L+ + R+ + + L + Sbjct: 368 GLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSRQIH 427 Query: 432 WDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELK 491 W+ + G ++ + LLG+L+ +AE S + + R M + + Sbjct: 428 WNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM-VSGQTT 486 Query: 492 DKVAMMNRLQQALEHNHFFLMAQPITGMRGDVYHEILLRMKGENDELISPDSFLPVAHEF 551 +V ++N ++ AL+ L AQPI G+ Y EIL R+K + +++PD FLP+ +F Sbjct: 487 KQVLLLNTIRTALDQGDLLLYAQPIRNKEGEGYDEILARLKY-DGGIMTPDKFLPLIAQF 545 Query: 552 GLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAW 611 LS+ D+ V+E L+++A + RF++NL P ++ Q + +L +Y I Sbjct: 546 NLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQ 605 Query: 612 QLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGS 671 +I E+TE A +N + + ++ L + G +IAIDDFGTGYA+Y RLK + AD++KIDG Sbjct: 606 AVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGV 665 Query: 672 FIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQ 731 F+++IV+N+LD IV SI LA+ K + VVAE+VE ++ + + LG+ Y+QGYLIG+PQ Sbjct: 666 FVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 Query: 732 PLID 735 PL D Sbjct: 726 PLAD 729 >UniRef50_Q47GC0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Betaproteobacteria RepID=Q47GC0_DECAR Length = 862 Score = 587 bits (1515), Expect = e-166, Method: Composition-based stats. Identities = 122/506 (24%), Positives = 216/506 (42%), Gaps = 27/506 (5%) Query: 254 MMWGAMRYGYKLISLLWAVVLM-----ISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFI 308 + + R+G +W + I + +YP + + + ++ V +I Sbjct: 318 RLLQSGRHGADFYREMWETIHRTGAWQGEIWGRRKNGEVYPKWLSISAVVGTNGRVSHYI 377 Query: 309 VNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL--------RDAPWSALCYLR 360 + + T ++ RI LA+ D + LPN L L R AL ++ Sbjct: 378 GTHNDI--TERKKAEERINALAFFDQLTGLPNRTLLLDRLKQTILSSGRSDSHGALLFID 435 Query: 361 IPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRL------NTESH 414 + + L G + Q ++++ L+ + G+ V +L G++ + L + E+ Sbjct: 436 LDNFKTLNDTLGHDVGDQLLKQVALRLTHCVRDGDTVARLGGDEFVVVLANLNTNDKEAA 495 Query: 415 QERITALDSHLKQFRFFWD--GMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVT 472 Q+ T + L + + + + P+ I L+ + + + Sbjct: 496 QDTETVAEKILATLNQTYQLGHVTHHSSASIGATLFKGPLIPIDDLMKQADLS--MYKAK 553 Query: 473 NAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDVYHEILLRMK 532 A N R ++ +K + M + L +AL F L Q E+LLR + Sbjct: 554 AAGRNAVRFFDPSMEIAVKVRAEMEDDLLRALAEKQFLLHYQAQMVGERLTGAEVLLRWQ 613 Query: 533 GENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAEN--RAKMPAHRFAINLSPTSV 590 ++SP F+P+A E GL + WV+E +A+ R ++ A+N+S Sbjct: 614 HPQRGMVSPAEFIPLAEETGLILPLGHWVLETACTQLAQWAGRPEVAHLTLAVNVSAHQF 673 Query: 591 CQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGT 650 Q F +V +L K +L E+TES + NV+ + L+ G ++DDFGT Sbjct: 674 RQNDFVDQVLGVLEKTGANPQRLKLELTESLLVENVEDIIDKMAALKHRGVGFSLDDFGT 733 Query: 651 GYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEI 710 GY+S + LK + D LKID SF+R+++++S D I +I LA + V+AE VE E Sbjct: 734 GYSSLSYLKRLPLDHLKIDQSFVRDVLTDSNDASIARTIVALANSLGLGVIAEGVETEAQ 793 Query: 711 REAVLSLGIDYMQGYLIGKPQPLIDT 736 R+ + S G QGY +P P+ D Sbjct: 794 RDFLASSGCHTYQGYYFSRPLPIEDF 819 >UniRef50_A1K3A1 GGEF/EAL/PAS/PAC-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K3A1_AZOSB Length = 818 Score = 580 bits (1496), Expect = e-164, Method: Composition-based stats. Identities = 128/508 (25%), Positives = 218/508 (42%), Gaps = 27/508 (5%) Query: 255 MWGAMRYGYKLISLLWAVVL-----MISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIV 309 + + R+ +W V I + + I+P T + + V ++ Sbjct: 313 LLRSGRHDAAYYDAMWRGVHEAGHWQGEIWNRRKNGEIFPELLTLSVVRDHNGKVSHYVG 372 Query: 310 NYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL--------RDAPWSALCYLRI 361 + + +R + R+QRLA+ D + LPN LN L R A+ +L I Sbjct: 373 VFSDI--SRMKETEARLQRLAHYDALTDLPNRVLLNLRLAHGVERVQRSGEMLAVLFLDI 430 Query: 362 PGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITAL 421 + + + G + + +++ L + + + +L G++ + L+ + Sbjct: 431 DRFKNVNDSLGHPVGDELLIEIARRLRSRIRAEDTLARLGGDEFVILLDRIRSANDVADF 490 Query: 422 DSHL-----KQFRF-FWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAP 475 + + F+ + + IG+S + + + N A L A Sbjct: 491 AQEIIDLLNQSFQLASGQEVFVGASIGISLYPLDTDDATQLIS----NADAALYQAKEAG 546 Query: 476 ENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKG 533 N+ R L R +++ + L++ LE F L QP+ + V E L+R Sbjct: 547 RNVYRFYTADLTRAAHERLGLEAALRRGLERGEFVLHFQPVVALDKGEVVGAEALVRWNH 606 Query: 534 ENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQA 593 + +I+P F+P+A E GL + WV+E + E A+NLS Sbjct: 607 PTEGMIAPLRFIPLAEETGLIVPLGEWVLESACRQGREWLDCGRPLTIAVNLSTRQFRAG 666 Query: 594 RFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYA 653 V +L + A L E+TES + + +A TL L+ LG +++IDDFGTGY+ Sbjct: 667 DLTATVRDILDRTGFPAALLELEITESTVMEDADRAVATLAALKGLGVRLSIDDFGTGYS 726 Query: 654 SYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREA 713 S A LK D LKID SF+R+I + D IVA++ +A ++ V+AE VE E Sbjct: 727 SLAYLKRFAVDALKIDRSFVRDIADDENDRMIVATVVAMAHQMRLGVIAEGVETAEQLAF 786 Query: 714 VLSLGIDYMQGYLIGKPQPLIDTLNEIE 741 + SLG + QGYL+G+PQ D L +E Sbjct: 787 LRSLGCEAYQGYLVGRPQAAADFLGAVE 814 >UniRef50_Q5P4W8 Putative uncharacterized protein n=2 Tax=Proteobacteria RepID=Q5P4W8_AZOSE Length = 1039 Score = 576 bits (1486), Expect = e-162, Method: Composition-based stats. Identities = 128/512 (25%), Positives = 225/512 (43%), Gaps = 23/512 (4%) Query: 255 MWGAMRYGYKLISLLWAVVL-----MISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIV 309 M+ R+ +W ++ + S ++ YP + T + + + ++ Sbjct: 523 MFKPERHEATFFDAMWTSIVESGSWAGEVWSRRSDGDRYPQWVTITAVRDTDGRIAEYVT 582 Query: 310 NYMAVLATRQRAVVRRIQRLAYVDPVVHLPNV--------RALNRALRDAPWSALCYLRI 361 + + T ++ + R A DP+ L N RAL A R L +L + Sbjct: 583 LFSDI--TERKQQEVAMWRQANFDPLTGLANRSLLQDRLDRALAHARRHGCKVGLLFLDL 640 Query: 362 PGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITAL 421 G + + + G + + ++ L+ + + V +L G++ + ++ + + + A+ Sbjct: 641 DGFKWINDSLGHDVGDELLVDVARRLNSCVRDEDTVARLGGDEFTVVVHDLADRADLGAI 700 Query: 422 DSHLK---QFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENM 478 L + F G V + + LL + + A +N Sbjct: 701 ADKLVAVLREPFALRGARHHISGSVGITVFPDDGDDVQTLLRNADIA--MYKAKQAGKNR 758 Query: 479 QRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGEND 536 + A ++Q + +V + L+ A+E F L QPI V E L+R K Sbjct: 759 AQPYAPHMQADALARVHLEADLRMAVEQRAFELHYQPIVDCASGALVGAEALIRWKHPER 818 Query: 537 ELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRA-KMPAHRFAINLSPTSVCQARF 595 +ISP F+PVA E GL I WV+ ++ + A P R +N+S +A Sbjct: 819 GMISPLEFIPVAEECGLIVPIGEWVLREVVRQRRDWLARGHPPLRLTLNVSGVQFREAGL 878 Query: 596 PVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASY 655 P V LLA++ L+FE+TES + + + + ++E G A+DDFGTG++S Sbjct: 879 PELVRTLLAEFGTARSSLVFEITESVLMGGSENVEARMCDIKEQGICFALDDFGTGFSSL 938 Query: 656 ARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVL 715 + LK D++KID SF+R+ + D +V +I ++A + V AE VE+ E RE + Sbjct: 939 SYLKRFPVDIVKIDRSFVRDCPDDRNDATLVEAIINMAHSLGLRVTAEGVESAEQREFLR 998 Query: 716 SLGIDYMQGYLIGKPQPLIDTLNEIEPIRESA 747 +LG DY+QGYLIGKP + P+R +A Sbjct: 999 ALGCDYLQGYLIGKPLAADAFEALMAPLRSAA 1030 >UniRef50_C1M7D0 Putative uncharacterized protein n=1 Tax=Citrobacter sp. 30_2 RepID=C1M7D0_9ENTR Length = 740 Score = 575 bits (1483), Expect = e-162, Method: Composition-based stats. Identities = 238/720 (33%), Positives = 382/720 (53%), Gaps = 29/720 (4%) Query: 28 IFAHINTFAHISSGEVFLFYLPLALMISMMMFFSWAALPGIALGIFVRKYAELGFYETLS 87 + H++ ++ + + L L L+ ++++ + ALP +A F+ + Sbjct: 33 VAGHLSKQEDVAGITLHFYDLTLPLISALLVLYRQKALPILA-TFFLYALYSYSLSSVFT 91 Query: 88 LTANFIIIIILCWGGYRVFTPRRNNVSHGDTRLISQRIFWQIVFPATLFLILFQFAAFVG 147 LTA + +I Y T +R VS G ++L +QRI W + A LF+ + + Sbjct: 92 LTAQLLAALI-SQTLYFFSTGKRGAVSFGRSQLTTQRIVWLVCCNALLFISIDHWFQSNT 150 Query: 148 LLASRENLVGVMPFNLGTLINYQALLVGNLIGVPLCYFIIRVVRNPFYLRSYYSQLKQQV 207 A NL F L TLIN Q L+ L G+P CY ++R V+NP + Y Q+K + Sbjct: 151 ASAPIANL-----FTLQTLINLQWLMNSCLTGIPFCYLLLRSVQNPAWCILYIRQVKALI 205 Query: 208 DAKVTKKEFALWLLALGALLLLLCMPLNEKSTIFSTNYTLSLLLPLMMWGAMRYGYKLIS 267 + LWL+ L ++ L + + E IF T+Y+L LLP+M+WG + G+ LIS Sbjct: 206 KSGPPILYQVLWLVLLLCIMSALIV-IREDILIF-TDYSLLWLLPVMLWGVICIGHALIS 263 Query: 268 LLWAVVLMISIHSYQNYIPI--YPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRR 325 +W +L++ + +YIP Y Y L I+S+ VFS + VL R +RR Sbjct: 264 PVWVTMLILLGYYINSYIPPANYNNYLHSLVISSTIVFVFSITIVVTGVLVVHNRKYLRR 323 Query: 326 IQRLAYVDPVVHLPNVRALNRALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSH 385 +++L +P LPN +AL +R LCY+R + L + +GI R ++ + LS Sbjct: 324 LKQLFRSEPNTGLPNFQALQMDIRKHATECLCYIRCTELNTLEQTHGIEFRFEFVKALSA 383 Query: 386 WLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLKQFRFFWDGMPMQPQIGVSY 445 ++ L++ D+Y G+ + LRLN I L L FRF W + G++Y Sbjct: 384 YVRKLIKGTGDIYYAPGHGIILRLNAVPD---IPDLYKDLNSFRFIWKDYQLGLSCGMAY 440 Query: 446 CYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALE 505 ++ + ++ + LNT + +S++ P + + ++ + + + LQ+A++ Sbjct: 441 TTEKNLIKNLSQAIKHLNTQSYISLMQGQPLLLSPQVP---GDKIVSQAVIRHMLQKAID 497 Query: 506 HNHFFLMAQPITGM---------RGDV--YHEILLRMKGENDELISPDSFLPVAHEFGLS 554 F LMAQPI + YHEIL+R+K + +LI PD+ LPVA E GL Sbjct: 498 RKSFELMAQPIVSTMLVVQPIVSTTGLTRYHEILIRIKMVDGKLIFPDTILPVAREAGLL 557 Query: 555 SSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLI 614 ++D+ VIE T +F+ + P F+INL+P S+ + F V L KY I ++I Sbjct: 558 PALDITVIEQTFRFIQSRQKSDPNSHFSINLTPDSLNKIDFLDNVFTLFRKYSIAPERII 617 Query: 615 FEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIR 674 FEV ES+ + N L+ L++ G +IAIDDFGTG +SY+RL+ ++AD+LKIDGSFIR Sbjct: 618 FEVIESDIIDN-ANVTDVLRALRKAGSKIAIDDFGTGASSYSRLRTLDADILKIDGSFIR 676 Query: 675 NIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLI 734 NI+++ V S C +A++K M VVAE+VENEEI + ++++GI ++QGY IGKP P+ Sbjct: 677 NILTDEFSRCAVRSFCEVAKLKNMEVVAEFVENEEIEKMLITMGIGWLQGYHIGKPVPIE 736 >UniRef50_C6P1A0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1A0_9PROT Length = 1011 Score = 575 bits (1483), Expect = e-162, Method: Composition-based stats. Identities = 131/515 (25%), Positives = 224/515 (43%), Gaps = 36/515 (6%) Query: 254 MMWGAMRYGYKLISLLWAVVLM-----ISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFI 308 + + R+ +W + I + + +YP + T + + V +++ Sbjct: 502 RILNSGRHDAYFYKEMWERIKRTGEWEGEIWNRRKNGDVYPEHLTITAVKDAGGNVVNYV 561 Query: 309 VNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL--------RDAPWSALCYLR 360 M + A+ +A I+ LA+ DP+ LPN R L L R A+ ++ Sbjct: 562 ATLMDITAS--KASEEEIRNLAFFDPLTRLPNRRLLQDRLQQALASCGRSGKSGAILFID 619 Query: 361 IPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESH-----Q 415 + + L G + +K++ LS + G+ V ++ G++ + L S Sbjct: 620 LDNFKNLNDTLGHDIGDLLLEKVAIRLSSCVREGDTVARIGGDEFVVMLEDLSDNILDAA 679 Query: 416 ERITALDSHL-----KQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSI 470 E+ ++ S + ++ P IG + N + + EL A++++ Sbjct: 680 EQTESVGSKILASLNVPYQLGIHTYDNSPSIGATLF------NDNHNSIDELLKQADIAM 733 Query: 471 V--TNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITG-MRGDVYHEI 527 A N R +Q+ L ++A+ L++A+E + F L Q + E Sbjct: 734 YQAKKAGRNTMRFFDPRMQQSLSARLALELELRKAIEKDQFQLYYQIQVDETHRPLGAEA 793 Query: 528 LLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAK--MPAHRFAINL 585 LLR L++P F+P+A E GL I WV+E + +IN+ Sbjct: 794 LLRWMHPEHGLMAPAEFIPMAEETGLIVPIGWWVLETACTQLKAWEKDPLTRNLVLSINV 853 Query: 586 SPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAI 645 S Q F +V + Y I+ L E+TES L NV + L++ G ++ Sbjct: 854 SAKQFHQPDFVDQVQAAVDHYGIDPALLKLELTESILLENVDTTIKRMSALKKTGVGFSL 913 Query: 646 DDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYV 705 DDFGTGY+S LK + D LKID SF++ I S+S D IV++I +A+ +M V+AE V Sbjct: 914 DDFGTGYSSLQYLKRLPLDQLKIDQSFMQEITSDSSDMAIVSTIIAMAQSMQMGVIAEGV 973 Query: 706 ENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEI 740 E EE R+ +L G ++ QGYL KP P+ + Sbjct: 974 ETEEQRQLLLRKGCNHFQGYLFSKPVPVEQFEKLL 1008 >UniRef50_A1SZA9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=6 Tax=Psychromonas ingrahamii 37 RepID=A1SZA9_PSYIN Length = 777 Score = 573 bits (1478), Expect = e-162, Method: Composition-based stats. Identities = 118/516 (22%), Positives = 216/516 (41%), Gaps = 36/516 (6%) Query: 255 MWGAMRYGYKLISLLWAVVL-----MISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIV 309 ++ + R +W + + + IY T + +V +++ Sbjct: 269 LFNSGRQDKAFYKEMWNSINTTDAWRGEVSNRSKSGDIYAKNLTITAVRDGKGVVSNYVA 328 Query: 310 NYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRD--------APWSALCYLRI 361 + + + +A +I LAY DP+ LPN R L +LR AL +L + Sbjct: 329 TFRDITTS--KAASEKINNLAYFDPLTQLPNRRMLLDSLRHVLTISARSNQHCALLFLDL 386 Query: 362 PGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQER---- 417 + L G + Q+++ L+ + G+ V +L G++ + L S Q Sbjct: 387 DNFKTLNDTLGHDVGDLLLQQVATRLTDCVREGDIVARLGGDEFVVLLENLSLQAIEAAN 446 Query: 418 ------ITALDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIV 471 + + ++ IGV+ + EL A++++ Sbjct: 447 KAKKVAKKIIFELAQYYQLNMHRYHSTTSIGVTIFSGN------ETGIEELLKQADIAMY 500 Query: 472 --TNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD-VYHEIL 528 A N +Q + + M L++A+E N F L Q G + E L Sbjct: 501 QSKAAGRNTWHFFNKTMQESIIARADMERDLRKAIEDNQFQLHYQAQVSSSGQTLGAEAL 560 Query: 529 LRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAK--MPAHRFAINLS 586 +R + +SP +F+P+A E GL I WV++ + + A+N+S Sbjct: 561 IRWQHPERGQVSPFNFIPLAEETGLILPIGQWVLDSACAQLKAWQKNPLTQDLVLAVNIS 620 Query: 587 PTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAID 646 + Q F +V L ++ I +L E+TES + N+ + L ++G ++D Sbjct: 621 AKQLHQEDFVEQVKATLKRHDINPARLKLELTESMLVENISDIITKMNILSKIGISFSLD 680 Query: 647 DFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVE 706 DFGTGY+S LK + + +KID SF+R++++++ D IV +I ++ + V+AE VE Sbjct: 681 DFGTGYSSLQYLKKLPLNQIKIDQSFVRDLITDASDRAIVRTIITMSHSLDISVIAEGVE 740 Query: 707 NEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEP 742 E R+ +L G + QGYL KP P+ + ++ Sbjct: 741 TVEERQYLLDNGCTHYQGYLFSKPVPINEFEVLLKK 776 >UniRef50_C6X6V4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X6V4_METSD Length = 1126 Score = 572 bits (1476), Expect = e-161, Method: Composition-based stats. Identities = 118/503 (23%), Positives = 220/503 (43%), Gaps = 31/503 (6%) Query: 255 MWGAMRYGYKLISLLWAVVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAV 314 +W +R + + +W + + YP + + + + V +++ + + Sbjct: 624 IWQTLRREGQWVGEIW---------NRRKSGESYPEWLSISQVADAKGSVQNYVAVFTDI 674 Query: 315 LATRQRAVVRRIQRLAYVDPVVHLPNV--------RALNRALRDAPWSALCYLRIPGMEM 366 T+++ R+Q LA D + HLPN +AL RA R+ A+ ++ + ++ Sbjct: 675 --TQRKLSEERLQFLANHDALTHLPNRALLQERIDQALFRAQRNKTAIAVLFIDLDRFKI 732 Query: 367 LVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHL- 425 + G Q+ + L L + V + G++ + + + + + + Sbjct: 733 INDTLGHQTGDMLLQEAAKRLKECLRETDTVARQGGDEFVVLVEDCGDTDYLNTIARKIM 792 Query: 426 ----KQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRR 481 + F + + IG+S Y ++ LL + A + + +N R Sbjct: 793 ATLAQPFILVGRELFISASIGIS-VYPDDGLDTASLLK---HADAAMYRAKESGKNTFRF 848 Query: 482 GAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELI 539 A + + + N L++A+E N F L QP +R + E ++R + ++ Sbjct: 849 YAAEANTNSVELLTLENNLRRAVERNEFVLHYQPKVDLRSQKIIGAEAVVRWQHPELGML 908 Query: 540 SPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRA-KMPAHRFAINLSPTSVCQARFPVE 598 SP F+P+A E GL I W++ + + E + R A+NLS Sbjct: 909 SPMQFIPLAEETGLIIDIGAWIMRESCRQAVEWQQLTGQNVRVAVNLSARQFRDETLRQT 968 Query: 599 VSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARL 658 ++ L + + L E+TES + N ++A+ LQH +LG + IDDFGTGY+S+ L Sbjct: 969 IADALTESGLTPDCLELEITESMIMHNAERAREVLQHFHDLGAHVLIDDFGTGYSSFGYL 1028 Query: 659 KNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLG 718 K+ D LKID SF+R+I + D I +I +A ++ VVAE VE +E + G Sbjct: 1029 KHFPIDSLKIDRSFVRDIPDDVDDMAITQAIIAMAHSLQIKVVAEGVETQEQLAFLKKQG 1088 Query: 719 IDYMQGYLIGKPQPLIDTLNEIE 741 D +QG+L +P D + ++ Sbjct: 1089 CDQIQGFLFSEPLHSHDFVRMLK 1111 Score = 42.0 bits (98), Expect = 0.080, Method: Composition-based stats. Identities = 47/315 (14%), Positives = 100/315 (31%), Gaps = 26/315 (8%) Query: 24 LILPIFAHINTFAHISSGEVFLFYLPLALMISMMMFFSWAALPGIALGIFVRKYAELGFY 83 + + +N + I L +++++ F + A P I +G +Y Sbjct: 25 FVYCLLGSLNLWIPIPDAWATLISPTAGFSLAILLVFGYRAWPAIFMGSLFTHLHATVYY 84 Query: 84 ETLSLTANFIIIIILCWGGYRVFTPRRNNVSHGDTRLISQRIFWQIVFPATLFLILFQFA 143 ++ + +L + R + + R +F+ + + ++ Sbjct: 85 VAATMAVGDTLETLLACYLLKQVA--RFDPALIRLRDFLTLVFFAVGISPLVSALINVLM 142 Query: 144 AFVGLLASRENLVGVMPFNLGTLINYQALLVGNLIGVPLCYFIIRVVRNPFYLRSYYSQL 203 V VG L L +++ P L Y+ + Sbjct: 143 LVV---------VGADTTALANSFTNSWL-------EDAFSYLL---FTPAVLAFYHYEP 183 Query: 204 KQQVDAKVTKKEFALWLLALGALLLLLCMPLNEKSTIFSTNYTLSLLLPLMMWGAMRYGY 263 + A+V + L+ LL +L S + +L PL+MW A+R+ Sbjct: 184 IRWSWARVGEALILAGLVVFSCLLTMLGAMDKSMSQLMQPQ--AFMLFPLIMWAALRFHQ 241 Query: 264 KLISLLWAVVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFI---VNYMAVLATRQR 320 + +L V M ++ + + + Q + V V + A R R Sbjct: 242 RGAALSVLFVAMTALWGGAHGLGTFAHDFAQSNLLDYWMYVLVLSSTGVALSGLNAGRIR 301 Query: 321 AVVRRIQRLAYVDPV 335 + R ++L D + Sbjct: 302 SEARLKEQLDTYDAL 316 >UniRef50_C5V1H2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V1H2_9PROT Length = 1134 Score = 572 bits (1475), Expect = e-161, Method: Composition-based stats. Identities = 118/517 (22%), Positives = 217/517 (41%), Gaps = 28/517 (5%) Query: 254 MMWGAMRYGYKLISLLWAVVLMIS-----IHSYQNYIPIYPGYTTQLTITSSSYLVFSFI 308 + A R S +W + + I + IYP + T + + ++ Sbjct: 621 RILSAGRNEKSFYSAMWQQLTTLGRWRGEIWDKRKSGQIYPKWMTITAVRDENGKTTEYV 680 Query: 309 VNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL--------RDAPWSALCYLR 360 + + T+++ I+ LA+ D + LPN R L L R + A+ +L Sbjct: 681 AIFSDI--TQRKLAEEEIRNLAFYDALTRLPNRRLLLDRLHAALSVSARSRRFGAVLFLD 738 Query: 361 IPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNT-----ESHQ 415 + + L G +++ + + + V +L G++ + + E Sbjct: 739 MDRFKTLNDTMGHDYGDLLLIEVAERIKLCVREIDTVARLGGDEFVILVEEIDTRAEETS 798 Query: 416 ERITALDSHLKQ---FRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVT 472 + I A+ ++ + + C R LL + + Sbjct: 799 KHIAAIAEKIRSALSVPYRLKEKHHHSSPSIGVCLYRGIEESTDDLLKHADMA--MYQAK 856 Query: 473 NAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGM-RGDVYHEILLRM 531 ++ N R +Q+ ++ +V + N L+ AL ++ L Q R + E L+R Sbjct: 857 DSGRNAVRFFDPLMQQAVEARVTLENDLRHALPNDQLQLYYQIQVDNDRRAIGAEALVRW 916 Query: 532 KGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAEN--RAKMPAHRFAINLSPTS 589 ++SP F+P+A E L + WV++ +A R A+N+S Sbjct: 917 IHPIRGMVSPAHFIPIAEETSLILEVGAWVLKTACLQLAVWADRPMTCNLILAVNVSVQQ 976 Query: 590 VCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFG 649 Q F +++L+ Y I +L E+TES L +V + L+ LG ++++DDFG Sbjct: 977 FKQVGFVEHIAELIRAYCIVPQRLKLELTESVVLNDVSDIVQKMCALKSLGVRLSMDDFG 1036 Query: 650 TGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEE 709 TGY+S + LKN+ D LKID SF+RNI ++ D +V +I +A+ ++ V+AE VE E Sbjct: 1037 TGYSSLSYLKNLPLDQLKIDQSFVRNIATDENDAVMVKTIIAMAQNFRLNVIAEGVETEA 1096 Query: 710 IREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIRES 746 + G QGY GKP P+ +++E + ++ Sbjct: 1097 QLAFLKQNGCMCYQGYYFGKPAPIEQFQSQLEALSKT 1133 >UniRef50_C7RMB6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RMB6_9PROT Length = 922 Score = 568 bits (1465), Expect = e-160, Method: Composition-based stats. Identities = 122/519 (23%), Positives = 216/519 (41%), Gaps = 37/519 (7%) Query: 255 MWGAMRYGYKLISLLWAVVLMIS-----IHSYQNYIPIYPGYTTQLTITSSSYLVFSFIV 309 M + R L +W V + + +YP + T + LV ++ Sbjct: 399 MLTSGREDAALDDAMWETVQRCGAWQGEVWDRRKNGEVYPVWLTISAVKGQGGLVTHYVA 458 Query: 310 NYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL--------RDAPWSALCYLRI 361 ++ + T+++AV ++ +LA+ DP+ LPN R L L R A+ ++ + Sbjct: 459 THIDI--TQRKAVEDQLHKLAFYDPLTQLPNRRLLLDRLGHVLAGSTRSRNQGAIMFIDL 516 Query: 362 PGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITA- 420 + L G + + +++ L + + V +L G++ + + + + A Sbjct: 517 DNFKALNDTQGHDVGDRLLAEVAQRLKSSVRQCDTVARLGGDEFVVMVQDLAADSMVVAQ 576 Query: 421 --------LDSHLKQFRFFWDG-------MPMQPQIGVSYCYVRSPVNHIYLLLGELNTV 465 L + +R +D + + + ++ LL + + Sbjct: 577 VEAVAGKILAALDCPYRLVFDAELGRRNALNYHCTASIGITLFGAHSTNVDELLKQADLA 636 Query: 466 AELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPIT--GMRGDV 523 + ++ N R +Q + +VA+ L++A+E F L QP Sbjct: 637 --MYQAKDSGRNAIRFFDPEMQAAITSRVALEADLREAVEAGQFQLYYQPQVVGESHRLT 694 Query: 524 YHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAK--MPAHRF 581 E LLR ++ P F+P+A E GL + WV+E +A ++ M Sbjct: 695 GAEALLRWHHSRRGMVPPSEFIPLAEETGLILPLGQWVLETACAQLATWASQPEMAQLTV 754 Query: 582 AINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGC 641 A+N+S + Q F +V +LA +L E+TES ++NV+ + L+ G Sbjct: 755 AVNVSAHQIRQTDFVDQVLAVLADAGANPQRLKLELTESLLVSNVEDIIAKMTLLKSRGV 814 Query: 642 QIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVV 701 ++DDFGTGY+S + LK + D LKID SF+ +++++ D I I LA + V+ Sbjct: 815 GFSLDDFGTGYSSLSYLKRLPLDQLKIDQSFVNEVLTDANDAAIAKMIVALAESLGLAVI 874 Query: 702 AEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEI 740 AE VE EE R + G QGYL KP PL I Sbjct: 875 AEGVETEEQRNFLAESGCHAYQGYLFSKPLPLAGFEQWI 913 >UniRef50_C5V5K2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V5K2_9PROT Length = 925 Score = 566 bits (1460), Expect = e-159, Method: Composition-based stats. Identities = 123/516 (23%), Positives = 212/516 (41%), Gaps = 40/516 (7%) Query: 255 MWGAMRYGYKLISLLWAVVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAV 314 MW ++ K +W + IYP + S + +V ++ +Y + Sbjct: 424 MWRQIKQTGKWQGEIW---------DKRKNGEIYPKLLNIYAVKSKNGVVTHYVGSYTDL 474 Query: 315 LATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL--------RDAPWSALCYLRIPGMEM 366 T ++ +I LA+ D + LPN R L L R AL ++ + + Sbjct: 475 --TERKMAEEKIISLAFYDTLTGLPNRRLLLDRLNYALASGLRTGKNGALLFIDLDKFKT 532 Query: 367 LVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLK 426 L G + ++++H L + + V ++ G++ + L + + A + + Sbjct: 533 LNDTLGHDIGDLLLKQVAHRLKACVREIDTVARIGGDEFVVMLEDLNIESVEAAAQTEVI 592 Query: 427 ----------QFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAP- 475 ++ + IG+S E A++++ Sbjct: 593 GEKILAALRMPYQLLTNEFHSSVSIGISLFSNNGQSQD------EPLKQADIAMYQAKKS 646 Query: 476 -ENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITG-MRGDVYHEILLRMKG 533 N R +Q + + + L++AL + L Q + E+LLR Sbjct: 647 GRNKLRFFDQRMQDTISSRANLEAELRKALANEQLQLHYQIQVDSAHQTIGAEVLLRWIH 706 Query: 534 ENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRA--KMPAHRFAINLSPTSVC 591 + +ISP F+PVA E GL I +WV+E + + + AIN+S Sbjct: 707 PVNGIISPAQFVPVAEETGLILPIGLWVLETACAQLKKWQDNPATAQLILAINVSARQFH 766 Query: 592 QARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTG 651 Q F EV ++ ++ I L E+TE L N+ T++ LQE G Q ++DDFGTG Sbjct: 767 QNGFATEVRSVIERHDINPALLKLELTEGMLLNNLDDTIATMRSLQEFGVQFSLDDFGTG 826 Query: 652 YASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIR 711 Y+S LK + LKID SF+R++ + D IV +I +A + V+AE VE E R Sbjct: 827 YSSLQYLKRLPLAQLKIDQSFVRDLATGYNDQAIVRTIIAMAHSLNLNVIAEGVETEIQR 886 Query: 712 EAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIRESA 747 + +L + QGYL GKP P+ + + +A Sbjct: 887 QILLKNQCSHFQGYLFGKPMPIEQFESLLSSDSTAA 922 >UniRef50_C6P1Q1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1Q1_9PROT Length = 1135 Score = 565 bits (1458), Expect = e-159, Method: Composition-based stats. Identities = 121/520 (23%), Positives = 226/520 (43%), Gaps = 36/520 (6%) Query: 254 MMWGAMRYGYKLISLLWAVVLM-----ISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFI 308 + + + + +W ++ I + + +YP + + +V +++ Sbjct: 621 RILSSGLHDSHFYAAMWNTLVATGAWKGEIWNKRKNGEVYPERLAITAVKDARGVVINYV 680 Query: 309 VNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL--------RDAPWSALCYLR 360 + + T +A I+ LA+ DP+ LPN R L L R AL +L Sbjct: 681 ASLSDI--TLHKAAEDEIRSLAFFDPLTGLPNRRLLMDRLQQALVASSRSGKAGALLFLD 738 Query: 361 IPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITA 420 + + L G + Q+++ L + G+ V ++ G++ + L S + A Sbjct: 739 LDNFKNLNDTLGHDIGDLLLQQVAQRLKNCVREGDTVARIGGDEFVVMLEDLSAESIEAA 798 Query: 421 LDSHL----------KQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSI 470 + K + + P IG + + ++ +L A++++ Sbjct: 799 SQTEAVGWKIISTLNKPYHLEKFEVHSTPSIGATLF------DSRPQIIDDLFKQADIAM 852 Query: 471 V--TNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITG-MRGDVYHEI 527 A N R +Q L + A+ L++++E F L Q M V E Sbjct: 853 YQAKKAGRNTMRFFDPQMQDTLNTRTALEADLRKSIERREFNLFYQIQVDEMNRPVGAEA 912 Query: 528 LLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAK--MPAHRFAINL 585 L+R ++SP F+P+A E L +I +WV++ + + A+N+ Sbjct: 913 LIRWIHPKRGMVSPAEFIPLAEETDLILNIGLWVLQEACAQLKTWQNNPLTRNLVLAVNV 972 Query: 586 SPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAI 645 S Q+ F +V + KY I+ +L E+TES N++ + + L+E+G Q ++ Sbjct: 973 SAKQFRQSDFATQVRVFVEKYAIDPSKLKLELTESMLQENIEDTILIMNALKEIGVQFSL 1032 Query: 646 DDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYV 705 DDFGTGY+S +K + + LKID SF+ ++ + D IV +I +A+ ++ V+AE V Sbjct: 1033 DDFGTGYSSLQYIKKLPLNQLKIDQSFVHDLDFDRDDKAIVRAIIAMAKSLQLDVIAEGV 1092 Query: 706 ENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIRE 745 E +E R+ +L+ G + QGYL KP P+ + +E E Sbjct: 1093 ETQEQRQLLLNKGCTHFQGYLFSKPLPIREFDALLERAIE 1132 >UniRef50_C6NZE4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZE4_9PROT Length = 727 Score = 565 bits (1458), Expect = e-159, Method: Composition-based stats. Identities = 125/513 (24%), Positives = 219/513 (42%), Gaps = 28/513 (5%) Query: 255 MWGAMRYGYKLISLLWAVVLM-----ISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIV 309 + + R+ + +W +L I + +YP + + S + ++ Sbjct: 219 LLASGRHDHTFYREMWDDILANGHWEGEIWDRRKNGEVYPSWMNINPVRDISGNLLYYVG 278 Query: 310 NYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL--------RDAPWSALCYLRI 361 + V T+++ +I +LA+ DP+ LPN R LN L R A+ +L + Sbjct: 279 IFSDV--TKRKEAEAQIHQLAFYDPLTELPNRRLLNERLQQAFSVGARSGHHGAVLFLDL 336 Query: 362 PGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESH--QERIT 419 + L G + Q +++ L+ + G+ V +L G++ + L + S E T Sbjct: 337 DNFKTLNDTKGHDIGDQLLIEVAKRLNSCVRNGDTVARLGGDEFVVVLESLSSVPDEAAT 396 Query: 420 ALDSHLKQFRF------FWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTN 473 D ++ R+ + + R + +L +T + Sbjct: 397 QADLVAEKIRYALSQPYQLANHVHRTTPSIGVVMFRGHQQSLEEVLKFADTA--MYQAKT 454 Query: 474 APENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD-VYHEILLRMK 532 A N R +Q ++ + + L+Q +E N L Q + E+LLR + Sbjct: 455 AGRNAIRFYDPVMQASIEARAELEEELRQVVERNQLRLYYQVQMDSSNRPLGAEVLLRWQ 514 Query: 533 GENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAK--MPAHRFAINLSPTSV 590 L+SP F+P+A E G I +WV++ + ++ A+N+S Sbjct: 515 HPERGLVSPAQFIPMAEETGHIVPIGLWVLQTACTQLKVWQSDPLTCDLTLAVNVSAKQF 574 Query: 591 CQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGT 650 F +V + LA+ + L E+TES L NV+ ++ L+ LG ++DDFGT Sbjct: 575 RSMDFVSQVQRTLAQSGAKPSLLKLELTESLVLENVEDTIAKMRELKLLGVSFSMDDFGT 634 Query: 651 GYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEI 710 GY+S LK + D +KID SF+R+I S+S D IV +I ++ + + V+AE VE E Sbjct: 635 GYSSLQYLKRLPLDQIKIDQSFVRDIASDSNDAAIVQTIIAMSEVLGLNVIAEGVETEAQ 694 Query: 711 REAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPI 743 RE + G QGYL G+P PL + + Sbjct: 695 REFLDLRGCHAFQGYLFGRPAPLAEFEAILRKA 727 >UniRef50_B9YY70 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9YY70_9NEIS Length = 1054 Score = 564 bits (1455), Expect = e-159, Method: Composition-based stats. Identities = 126/508 (24%), Positives = 219/508 (43%), Gaps = 30/508 (5%) Query: 255 MWGAMRYGYKLISLLWAVVL-----MISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIV 309 + + R +W + I + + IYP + + + + V + Sbjct: 547 LLSSGRQPPAFYQKMWQQLAQRGHWAGEIWNRRKDGTIYPEWLSISLLRDEAGQVSHHVA 606 Query: 310 NYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRD--------APWSALCYLRI 361 + + + ++ I+ +A D + LPN ++ L A+ +L + Sbjct: 607 LFSDI--SERKEQEAHIRHMAEHDFLTDLPNRALIHDRLAQAIRAAARQKNRLAVLFLDL 664 Query: 362 PGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITAL 421 + + G + ++++ L + + V + G++ L + + L Sbjct: 665 DHFKNINDTLGHAHGDELLKQVAQRLQHTVRGSDTVGRNGGDEFVLIVPELASPAEAAQL 724 Query: 422 DSHL-----KQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIV--TNA 474 L + F+ + + IG+S L EL A+L++ Sbjct: 725 AQRLLDDLRRPFQIDGQALAISTSIGISLFPDNGSE------LQELLVSADLAMYHAKAQ 778 Query: 475 PENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPI--TGMRGDVYHEILLRMK 532 N + L ++ +++ + N L+QALE +L+ QP R V E LLR + Sbjct: 779 GRNRYQFFTPELNAQVAERLTLENHLRQALERQQLYLVYQPQFAIDNRRLVGCEALLRWQ 838 Query: 533 GENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQ 592 LISP F+P+A E GL I WV++ + A A R A+N+S + Q Sbjct: 839 HPEQGLISPARFIPLAEETGLIVEIGRWVLDEACRQAAAWLAAGTPLRVAVNVSARQLGQ 898 Query: 593 ARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGY 652 EV LA++++ + L EVTES + + +QA LQ +E G +A+DDFGTGY Sbjct: 899 PDLLAEVEAALARHRLPSCWLELEVTESTLMEDAEQAVRHLQAFKERGIHLAVDDFGTGY 958 Query: 653 ASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIRE 712 +S LK + DL+KID +F+ N+ N D IV++I LA M +AE VE+EE + Sbjct: 959 SSLTYLKRFSPDLIKIDRAFVMNLPDNRDDAAIVSAIVQLAEALGMQTLAEGVESEEQLD 1018 Query: 713 AVLSLGIDYMQGYLIGKPQPLIDTLNEI 740 + G D +QGYL G+PQ + ++ Sbjct: 1019 FLAQAGCDVVQGYLTGRPQSAGELTAQL 1046 >UniRef50_C5S5K8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S5K8_CHRVI Length = 1069 Score = 564 bits (1455), Expect = e-159, Method: Composition-based stats. Identities = 122/498 (24%), Positives = 214/498 (42%), Gaps = 26/498 (5%) Query: 260 RYGYKLISLLWAVVLM-----ISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAV 314 R + +W + I + + +YP T T+ S ++ + Sbjct: 565 RQDHAFYQAMWHSLKTTGHWQGEIWNRRKSGELYPQILTINTVADSQGRPSHYVGVMTDI 624 Query: 315 LATRQRAVVRRIQRLAYVDPVVHLPNVR--------ALNRALRDAPWSALCYLRIPGMEM 366 ++ + R++ L + DP+ +LPN R AL RA R A+ ++ + + Sbjct: 625 --SQLKQSEARLEHLVHYDPLTNLPNRRLVQSRLEHALERADRQGGRVAVLFVDLDRFKT 682 Query: 367 LVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHL- 425 + + G + L+ LS + + + +L G++ + L E A+ L Sbjct: 683 VNDSLGHPSGDVLLELLARRLSERVREDDTLARLGGDEFLVLLENLQRPEDAAAVAESLL 742 Query: 426 ----KQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRR 481 + F +G + + + + L+ + + N R Sbjct: 743 SLLQQPFHLP-NGQELYVGASIGISLYPDDGHTVTDLIQHADVA--MYQAKEEGRNTYRF 799 Query: 482 GAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELI 539 L + ++++ + RL +AL F L Q MR + E L+R + L+ Sbjct: 800 YTPSLTQTARERLGLEARLHRALASEEFVLHYQAQIDMRDGRLIGCEALVRWHSATEGLV 859 Query: 540 SPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRA-KMPAHRFAINLSPTSVCQARFPVE 598 +PD F+P+A E GL + WV+ RA + A+NLS + Sbjct: 860 APDRFIPLAEETGLIVPLGEWVLRQACADCQSWRARGLTDLTVAVNLSGRQLRSPDLVER 919 Query: 599 VSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARL 658 V+++L + + A +L E+TES + +QA L+ L+ LG +++IDDFGTGY+S A L Sbjct: 920 VTRVLRETGLPAERLKLELTESMIMDQREQALERLRALKALGVRLSIDDFGTGYSSLAYL 979 Query: 659 KNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLG 718 K + D LKID F+R+I +S D +I A+I +AR ++ V+AE VE E + ++ G Sbjct: 980 KRLPIDELKIDRDFVRDIPEDSSDMEIAATIIAMARNLRLNVIAEGVETPEQCDFLIRQG 1039 Query: 719 IDYMQGYLIGKPQPLIDT 736 QGYL G+P P Sbjct: 1040 CTAGQGYLFGRPLPAEAF 1057 >UniRef50_Q47IA0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47IA0_DECAR Length = 925 Score = 562 bits (1448), Expect = e-158, Method: Composition-based stats. Identities = 121/518 (23%), Positives = 215/518 (41%), Gaps = 28/518 (5%) Query: 238 STIFSTNYTLSLLLPLMMWGAMRYGYKLISLLWAVVLMISIHSYQNYIPIYPGYTTQLTI 297 I S T + + M W + LW + YP + + + Sbjct: 393 PRILSAGTTPTEVFSDM-WTCLHREGAWQGELW---------DRKKNGEAYPKWLSISLV 442 Query: 298 TSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL--------R 349 + + I +++ + + +A RI+ LA+ D + +L N +L+ L R Sbjct: 443 RDEDGQIRNHIGSFIDI--SELKATQERIRHLAHHDTLTNLANRFSLHEKLAQALAFCKR 500 Query: 350 DAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRL 409 + AL + + + + G + +++ LS + + V +L G++ + L Sbjct: 501 NRMQLALMLIDLDRFKTINDTLGHQAGDELLVQVAKRLSHAVRESDIVARLGGDEFVIAL 560 Query: 410 NTESHQERITALDSHLKQ---FRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVA 466 L + + + G ++ + C + I LL + Sbjct: 561 PGIGSPADAAHLADDITREISAPYLIKGQELRTSPSIGICVYPGDGSEIGDLLKNADVA- 619 Query: 467 ELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VY 524 + + + +++ + + L+ A+ F L QP +R V Sbjct: 620 -MYHAKANGRGNYQFFTEDMNIATTERMCLESDLRLAITRREFLLHYQPQLDLRSGTIVG 678 Query: 525 HEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAH-RFAI 583 E L+R + L+SP F+P+A E G+ ++I WV+E + + + + H R +I Sbjct: 679 VEALIRWQHPTRGLVSPADFIPIAEESGMIAAIGDWVLEEACRQLKVWQNRGITHLRMSI 738 Query: 584 NLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQI 643 NLS P + +LLA + A +L EVTES ++ + ++ ++ L G + Sbjct: 739 NLSAGQFLDKTLPARIHELLAANDLSADRLDLEVTESMSMASPDESISVMKTLSSSGLTL 798 Query: 644 AIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAE 703 +IDDFGTGY+S A LK + LKID SF+++I S+ D I LA + VVAE Sbjct: 799 SIDDFGTGYSSLAYLKLLPIHTLKIDRSFVKDIESDPNDADICDVTVLLAHKLGLEVVAE 858 Query: 704 YVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIE 741 VE E + +LS+G + +QGYLI KP P I Sbjct: 859 GVETEAQLKFLLSIGCEKVQGYLISKPLPADQAERFIR 896 >UniRef50_C7RNA9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RNA9_9PROT Length = 1399 Score = 561 bits (1447), Expect = e-158, Method: Composition-based stats. Identities = 112/502 (22%), Positives = 201/502 (40%), Gaps = 28/502 (5%) Query: 255 MWGAMRYGYKLISLLWAVVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAV 314 MW A+ +W + YP + + TI + +I +++ + Sbjct: 907 MWQAINSTGHWQGEVW---------DRRKDGSYYPKWLSISTIRGAEGNTEYYIGSFVDI 957 Query: 315 LATRQRAVVRRIQRLAYVDPVVHLPNV--------RALNRALR--DAPWSALCYLRIPGM 364 + ++A +I LA+ D + LPN +AL A R A+ +L + Sbjct: 958 --SERKAAEEKISHLAHFDTLTDLPNRSNLQGRLDQALASARREGHGRSVAVMFLDLDRF 1015 Query: 365 EMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSH 424 + + G + +++ L + + V +L G++ + L Sbjct: 1016 KNINDTLGHHVGDALLLEVAARLRSSVRDSDVVARLGGDEFVVVLTGADALAAERVAGKI 1075 Query: 425 LKQFR--FFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRG 482 LK + +G + + + + +L+ + A + +A N + Sbjct: 1076 LKALSRAYQIEGHALHSTSSIGIAVFPADGESVEVLMQNAD--AAMYHAKSAGRNNVQFF 1133 Query: 483 AMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDVYH-EILLRMKGENDELISP 541 + D+ + L AL+ F L QP + V+ E LLR + + L+ P Sbjct: 1134 TASMNEAASDRRQLEEDLHLALQQKQFVLHYQPQVDAQRRVFAVEALLRWQHPHHGLVPP 1193 Query: 542 DSFLPVAHEFGLSSSIDMWVIEHTLQFMAEN--RAKMPAHRFAINLSPTSVCQARFPVEV 599 F+P+A + GL I WV+E + A+ + A+N+S Q F + Sbjct: 1194 ARFVPLAEDTGLIVPIGQWVLETACAQIKAWSVDARTRKLQVAVNVSARQFRQPDFVELL 1253 Query: 600 SQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLK 659 Q + +L E+TES L NV + ++ LG ++DDFGTGY+S + L Sbjct: 1254 RQAIDNSGANPARLKLELTESLVLDNVADTIDKMNAIKLLGVTFSMDDFGTGYSSLSYLT 1313 Query: 660 NVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGI 719 + D LKID +F+ + N D I +I + R + VVAE VE E R+ + S G Sbjct: 1314 RLPLDQLKIDRAFVCRLPENRSDAVIAQTIVTMGRSLGLKVVAEGVETEAQRQFLDSHGC 1373 Query: 720 DYMQGYLIGKPQPLIDTLNEIE 741 D QG+L +P + + ++ Sbjct: 1374 DGYQGFLFSRPLAVDAFEDFLQ 1395 >UniRef50_C1DBY5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=3 Tax=Neisseriaceae RepID=C1DBY5_LARHH Length = 839 Score = 561 bits (1446), Expect = e-158, Method: Composition-based stats. Identities = 120/490 (24%), Positives = 203/490 (41%), Gaps = 22/490 (4%) Query: 261 YGYKLISLLWAVVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQR 320 Y + SL + + + Y + T I + + + T+++ Sbjct: 340 YRHLWQSLREHGFWQGEVINRRKDGKFYTEHLTITGIRGPDGTFTHYAGIFSDI--TQRK 397 Query: 321 AVVRRIQRLAYVDPVVHLPNVR--------ALNRALRDAPWSALCYLRIPGMEMLVKNYG 372 R+ LA DP+ LPN AL RA R AL +L + + + G Sbjct: 398 LNEERLHYLANHDPLTDLPNRTLLMERLGAALTRAHRQGKRVALMFLDLDRFKFINDTLG 457 Query: 373 IMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLKQ----- 427 + + Q ++ L+ L + V +L G++ + L + L Sbjct: 458 HAVGDKLLQTVASRLTGSLRASDTVARLGGDEFNIVLEDIRDLRGVAQTAQKLIDRVQGM 517 Query: 428 FRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQ 487 + + +G++ P + + +N + +N + + Sbjct: 518 VTLDGHDVYVTASVGIAI----YPDDGSTPEVLRMNADTAMYRAKERGKNNFQFFTADMN 573 Query: 488 RELKDKVAMMNRLQQALEHNHFFLMAQPITGM-RGDVYH-EILLRMKGENDELISPDSFL 545 ++ + + L +AL F L QP + G +Y E LLR + +SP F+ Sbjct: 574 ASTLARLRLESNLHRALARQEFQLHFQPKVDLAHGHIYGMEALLRWRSHELGPVSPADFI 633 Query: 546 PVAHEFGLSSSIDMWVIEHTLQFMAEN-RAKMPAHRFAINLSPTSVCQARFPVEVSQLLA 604 P+A E L S+I WV+E + + A+NLS + Q V ++L Sbjct: 634 PIAEESNLISTIGEWVLEQACRQARHWLNLGLLPGTVAVNLSSKQMTQGDIVATVRRILE 693 Query: 605 KYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNAD 664 + L E+TES A+ N + TL++L+ LG +IAIDDFGTGY+S + LK + D Sbjct: 694 HSNLPGHYLELEITESVAMDNTGEMIRTLKNLKALGVRIAIDDFGTGYSSLSYLKQLPID 753 Query: 665 LLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQG 724 +LKID SF+ ++ + D I ++I + + + VAE VE EE R+ +L G Y QG Sbjct: 754 VLKIDRSFVTDLHEDRDDAAIASAIISMGQSLNLQPVAEGVEREEHRQFLLDHGCQYGQG 813 Query: 725 YLIGKPQPLI 734 YL +P P Sbjct: 814 YLFSRPVPAA 823 >UniRef50_C5V1I4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gallionellaceae RepID=C5V1I4_9PROT Length = 935 Score = 561 bits (1446), Expect = e-158, Method: Composition-based stats. Identities = 118/511 (23%), Positives = 224/511 (43%), Gaps = 31/511 (6%) Query: 255 MWGAMRYGYKLISLLWAVVL-----MISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIV 309 + + R+G + W + I + + I+P + T + + + ++ Sbjct: 432 LLSSGRHGPEFYEAFWHALRANDLWRGEIWNKRKNGEIFPEWVTISALRDETSQISHYVA 491 Query: 310 NYMAVLATRQRAVVRRIQRLAYVDPVVHLPNV--------RALNRALRDAPWSALCYLRI 361 ++ + T ++ RI LA D + LPN +A + A R+ A+ ++ + Sbjct: 492 VFLDI--TERKKEEERINYLANYDVLTGLPNRYLLSDRIEQAFSSAQRNNFKVAVLFIDL 549 Query: 362 PGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERI--- 418 + + + G + + ++ L L + + +L G++ L+ E + Sbjct: 550 DYFKNINDSLGHDIGDALLKLVAARLKTCLRRSDTIARLGGDEFVALLSELDSSEEVIFV 609 Query: 419 --TALDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNA-- 474 ++S ++F + + P IG+ + EL A+L++ Sbjct: 610 AEKMIESLTEKFTLGEYQLSITPSIGICIYPDDGETSV------ELLRNADLAMYQAKDD 663 Query: 475 PENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMK 532 N + + + R+ +++ + L+ A+ + QP + E LLR + Sbjct: 664 GRNNFKFYSPDMNRKALERLKLETFLRVAIVQQQLSVYYQPKVSVLSGKMTGMEALLRWQ 723 Query: 533 GENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAH-RFAINLSPTSVC 591 ISP F+P+A E GL + I WV+ + +A+ A+NLS + Sbjct: 724 HPELGFISPAVFIPIAEETGLINEIGDWVLRQSCLQARLWQAQGYDIVPIAVNLSARQLK 783 Query: 592 QARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTG 651 Q F V +L + ++A L+ E+TES ++ + L+ L++ G ++A+DDFGTG Sbjct: 784 QDNFAARVVTILREAGLDAHYLVLEITESMLMSTGESGLQILEQLRDDGVRLALDDFGTG 843 Query: 652 YASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIR 711 Y+S +RLKN+ D LKID SF+R+IV++ D IV++ LA + V AE VE +E Sbjct: 844 YSSLSRLKNLPLDSLKIDQSFVRDIVTDPNDASIVSATAVLAHALNLKVTAEGVETQEQL 903 Query: 712 EAVLSLGIDYMQGYLIGKPQPLIDTLNEIEP 742 + + L + QGYL +P P + + P Sbjct: 904 DFIRMLNCEEYQGYLFSRPIPASEVVKYFLP 934 >UniRef50_C7RJ77 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RJ77_9PROT Length = 1399 Score = 560 bits (1445), Expect = e-158, Method: Composition-based stats. Identities = 113/500 (22%), Positives = 201/500 (40%), Gaps = 23/500 (4%) Query: 255 MWGAMRYGYKLISLLWAVVLMIS-----IHSYQNYIPIYPGYTTQLTITSSSYLVFSFIV 309 + + R+ +W + + I + + +YP + + +I Sbjct: 897 LLASGRHDQAFYQSMWESIESLGHWQGEIWNRRKDGSVYPEWLLISRV-DGDGAPTHYIG 955 Query: 310 NYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRD--------APWSALCYLRI 361 ++ + T+ + IQRLA+ D + LPN L +R AL ++ + Sbjct: 956 TFIDI--TQHKEAEASIQRLAHFDALTGLPNRSLLEERVRHDLARAHRGREALALMFVDL 1013 Query: 362 PGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITAL 421 + + + G + +++ L + + V +L G++ + L + Sbjct: 1014 DRFKNVNDSLGHRVGDALLIQVAERLRRAVRDEDTVSRLGGDEFIVVLPSTDADGAAHVA 1073 Query: 422 DSHLKQFR--FFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQ 479 L+ + + + + + L +T + + N Sbjct: 1074 AKLLEVMAPAYRIEQHELTCSLSAGIAMYPADGESFEALSMSADTA--MYRAKQSGRNAY 1131 Query: 480 RRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDE 537 +Q + + N L++ALE+ L QP + V E LLR + Sbjct: 1132 CFFTAEMQERSARNLQIENDLRRALENGELRLHYQPQFTLADRRLVGAEALLRWQHPQLG 1191 Query: 538 LISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMA-ENRAKMPAHRFAINLSPTSVCQARFP 596 ++SP F+P+A E GL I WV+ + + + +P A+NLS QA Sbjct: 1192 MVSPVEFIPIAEECGLILPIGEWVLRAAVSQLRVWQQEGLPPMTVAVNLSAVQFRQASLT 1251 Query: 597 VEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYA 656 VS++L + A L E+TES A+ N A T+ L+ LG +++IDDFGTGY+S + Sbjct: 1252 DVVSRILDAEGLAAQFLELELTESVAMDNPLAAIATMDKLRALGVRMSIDDFGTGYSSMS 1311 Query: 657 RLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLS 716 LK LKID SF+ ++ ++ D IV + LAR + +AE VE+E + + Sbjct: 1312 YLKRFRVHKLKIDRSFVADLAADPEDEAIVTATISLARDLGLQTIAEGVESEAQLAFLRA 1371 Query: 717 LGIDYMQGYLIGKPQPLIDT 736 G D QGYL +P Sbjct: 1372 KGCDEAQGYLFSRPLAPAQF 1391 >UniRef50_C6ME82 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Nitrosomonas sp. AL212 RepID=C6ME82_9PROT Length = 1136 Score = 560 bits (1444), Expect = e-158, Method: Composition-based stats. Identities = 122/516 (23%), Positives = 216/516 (41%), Gaps = 32/516 (6%) Query: 254 MMWGAMRYGYKLISLLWAVVL-----MISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFI 308 + + R+ +WA + + + + IYP + T T+ + +++ Sbjct: 613 RIIKSGRHDKLFYQAMWASLTKAGYWRGEVWNRRRSGDIYPQWLTISTVFNDRNEPCNYV 672 Query: 309 VNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNV--------RALNRALRDAPWSALCYLR 360 + + T+ + R+ LA+ D + LPN A+ R LR A YL Sbjct: 673 GVFTDI--TQIKQSEARLAHLAHYDALTGLPNRLLVQSRLHHAIERTLRHGNQIAALYLD 730 Query: 361 IPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITA 420 + + + + G + + L+ L L + + +L G++ + L Sbjct: 731 LDRFKNVNDSLGHPIGDELLVMLALRLKKRLREEDTLARLGGDEFLVVLEDIKDSNEPAM 790 Query: 421 LDSHL-----KQFRFF-WDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIV--T 472 + L F + + IG+S + + EL A++++ Sbjct: 791 VAQTLIDLLATPFSLPSGHEIFINTSIGISLFPTDANS------VTELIQHADMAMYLAK 844 Query: 473 NAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLR 530 N R L +++ + +L+QAL F L QP+ R + E L+R Sbjct: 845 QEGRNTYRYHTDALSIAANERLVLETQLRQALSAGEFVLHYQPLIDARKGQVMGVEALVR 904 Query: 531 MKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAEN-RAKMPAHRFAINLSPTS 589 + + ++SP F+P+A E GL + WV+ A P A+NLS Sbjct: 905 WQPPDKAMVSPGKFIPIAEETGLIVPLGEWVLRTACAQGRAWMDADFPPLVMAVNLSVRQ 964 Query: 590 VCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFG 649 + Q+L + ++ A L E+TES + + +Q+ L+ L+ LG +++IDDFG Sbjct: 965 FQSENLVELIRQVLEETKLPAACLELELTESMFMEHAEQSIEILKTLKSLGVRLSIDDFG 1024 Query: 650 TGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEE 709 TGY+S LK D LKID SF+ + + D +I A+I +AR K+ V+AE VE+E+ Sbjct: 1025 TGYSSLTYLKRFPIDKLKIDQSFVHGLAYDPNDREIAATIIAMARNLKLDVLAEGVESEQ 1084 Query: 710 IREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIRE 745 + + G DY QGYL +P P + + Sbjct: 1085 QLDILNQHGCDYYQGYLFHRPVPAQELEVWFRENKR 1120 >UniRef50_C4K931 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4K931_THASP Length = 855 Score = 560 bits (1444), Expect = e-158, Method: Composition-based stats. Identities = 118/505 (23%), Positives = 203/505 (40%), Gaps = 23/505 (4%) Query: 258 AMRYGYKLISLLWAVVLM-----ISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYM 312 + R + +W +L + + + +YP I ++ + + Sbjct: 354 SGRQSPAFYARMWDGLLGDGQWQGEVWNRRKTGEVYPQLLHITAIRDREGVLTHYAALFT 413 Query: 313 AVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL--------RDAPWSALCYLRIPGM 364 + +R + RI+ LAY DP+ LPN R L+ L R A+ ++ + Sbjct: 414 DI--SRLKETEARIRDLAYYDPLTGLPNRRLLDDRLQVELAHAARLRCRLAVMFVDLDRF 471 Query: 365 EMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTES-HQERITALDS 423 + + + G + + +++ L L + V ++ G++ + LN S E T Sbjct: 472 KRINDSLGHAVGDKLLVEIAARLRASLRDDDTVARMGGDEFLVVLNNLSGPDEAATMARR 531 Query: 424 HLKQFR--FFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRR 481 + + R +G + V L+ + + + N + Sbjct: 532 MVAELRRPVNVEGRELVVTTSVGVAVYPDDSRDADTLVKHADVA--MYRAKDEGRNSFQL 589 Query: 482 GAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELI 539 + +++A+ L +AL + L QP+ G V E LLR + + L+ Sbjct: 590 FEPAMNARSLERLALETALHRALPRDELQLYFQPVMKAEGGELVAVEALLRWRHPDLGLV 649 Query: 540 SPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAEN-RAKMPAHRFAINLSPTSVCQARFPVE 598 SP F+P+A + GL I WV+ + A +N+S + F Sbjct: 650 SPADFIPLAEDTGLIVPIGEWVLRSACEHHRRWCEAGGAPLHMMVNISARQFREEGFAAM 709 Query: 599 VSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARL 658 V +LA+ + L E+TES + + +A L HL+ LG +AIDDFGTGY+S A L Sbjct: 710 VGSVLAETGMTPGDLTLELTESMLMDDTDRALARLDHLRALGVCLAIDDFGTGYSSLAYL 769 Query: 659 KNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLG 718 K D LKID F+R I N+ D +V++I L + VVAE VE + + G Sbjct: 770 KRFPIDELKIDRLFVRGIDRNTRDAALVSAIVSLGHSLGLRVVAEGVETAAHLDVLRRQG 829 Query: 719 IDYMQGYLIGKPQPLIDTLNEIEPI 743 D QG+ P P + + P Sbjct: 830 CDLAQGFHFSPPLPWEEFVKAYPPA 854 >UniRef50_C6WTL1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WTL1_METML Length = 976 Score = 560 bits (1443), Expect = e-158, Method: Composition-based stats. Identities = 118/489 (24%), Positives = 209/489 (42%), Gaps = 31/489 (6%) Query: 269 LWAVVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQR 328 W+ ++ + + IYP + T + + +++ + + +A RI+ Sbjct: 481 SWSGEII----NRRKNGEIYPEHLTITAVKDADGQTTNYVGMFTDISV--AKAASERIEN 534 Query: 329 LAYVDPVVHLPNVRALNRAL--------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYK 380 LA+ DP+ +LPN R + L R + AL +L + + L G Sbjct: 535 LAFFDPLTNLPNRRLFSDRLTQALVNSTRSGNYGALVFLDLDHFKSLNDTLGHDYGDMLL 594 Query: 381 QKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESH-----QERITALDSHL-----KQFRF 430 ++++ LS + G+ V +L G++ L + S +I A+ + + ++ Sbjct: 595 KQVALRLSNCVREGDSVARLGGDEFVLLVENLSANDVEAAHQIEAIGDKILMSLNQPYQL 654 Query: 431 FWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQREL 490 P IG+S LL + + A N R +Q + Sbjct: 655 QSHEYLSTPSIGISLF--NGHQESSEDLLKHADIA--MYQAKKAGRNTLRFFDPLMQETI 710 Query: 491 KDKVAMMNRLQQALEHNHFFLMAQPITGMRGD-VYHEILLRMKGENDELISPDSFLPVAH 549 +V + L++A+E F L Q G E L+R + +ISP F+PVA Sbjct: 711 NMRVDLERELKKAIEQKQFELYYQVQMNSAGQPSGAEALIRWRHPERGIISPIQFIPVAE 770 Query: 550 EFGLSSSIDMWVIEHTLQFMAENR--AKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQ 607 E GL + I WV+ + + AIN+S Q F +V + + Sbjct: 771 ETGLITQIGEWVLNQACLQLQAWQLDQASKDFSLAINVSAKQFLQPDFANQVKNSIRSFH 830 Query: 608 IEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLK 667 I+ +L E+TES + N++ T+ L E+G Q ++DDFGTGY+S LK + LK Sbjct: 831 IDNTKLKLELTESMLIDNIEYVIHTMNTLGEIGIQFSLDDFGTGYSSLQYLKMLPLSQLK 890 Query: 668 IDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLI 727 ID SF+R++ +++ + IV +I +A + V+AE VE +E + + + G QGY Sbjct: 891 IDQSFVRDLATDNSNKTIVLTIITMAHSLGLNVIAEGVETDEQLQLLNAHGCGNYQGYYF 950 Query: 728 GKPQPLIDT 736 +P + + Sbjct: 951 SEPLSINEF 959 >UniRef50_C7RS22 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RS22_9PROT Length = 1006 Score = 560 bits (1443), Expect = e-158, Method: Composition-based stats. Identities = 125/515 (24%), Positives = 218/515 (42%), Gaps = 36/515 (6%) Query: 255 MWGAMRYGYKLISLLWAVVLM-----ISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIV 309 + + R+ + + + I + + ++P + T ++ +V ++ Sbjct: 499 LLSSGRHDASFYAAMRESIERNGVWQGEIWNRRKNGDVFPEWLTISSVRDGDGVVTHYVS 558 Query: 310 NYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALR--------DAPWSALCYLRI 361 + A +A I+ LA+ D + LPN R L+ LR AL ++ + Sbjct: 559 ALTDMSA--HKAAQEEIRHLAFYDALTGLPNRRLLHDRLRVAIASSVRSERQGALLFIDL 616 Query: 362 PGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITAL 421 + L G + + Q++ LS + G+ V +L G++ + L + A Sbjct: 617 DNFKTLNDTLGHDMGDRLLQQVGQRLSSSVREGDTVARLGGDEFVVMLENLGERPEEAAG 676 Query: 422 DSHL----------KQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIV 471 S + + + P +G++ + + EL A+L++ Sbjct: 677 QSRIVGEKIIKLLNRPYDLSGHDYHNTPSVGITLF------GGQQVGIDELMKRADLAMY 730 Query: 472 --TNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDV-YHEIL 528 + N R +Q + + + L+ A+ FFL QP G V E L Sbjct: 731 EAKASGRNALRFFDPRMQAVVTARADIEKDLRAAVGRQSFFLAYQPQVDASGQVIGAEAL 790 Query: 529 LRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAEN--RAKMPAHRFAINLS 586 LR + + +SP F+PVA E GL + +WV+E A R ++N+S Sbjct: 791 LRWQHQQRGTVSPAEFIPVAEETGLILPLGLWVLETACAQAALWAARPGRERFTVSVNVS 850 Query: 587 PTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAID 646 QA F +V +LA+ L E+TES L NV+ + L+ G ++D Sbjct: 851 ARQFRQANFVDQVLAVLARSGAHPRNLKLELTESMLLDNVQDIIAKMSALKARGVGFSLD 910 Query: 647 DFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVE 706 DFGTGY+S + LK + D LKID SF+R+++++ D I +I LAR + V+AE VE Sbjct: 911 DFGTGYSSLSYLKQLPLDQLKIDQSFVRDLLTDPNDEVIARTIIALARTLGLSVIAEGVE 970 Query: 707 NEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIE 741 + E ++A+ + G QGYL +P L D + Sbjct: 971 SVEQQDALAAQGCLAYQGYLFSRPLALADFEAFLR 1005 >UniRef50_C3X2S2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Oxalobacter formigenes RepID=C3X2S2_OXAFO Length = 1049 Score = 559 bits (1442), Expect = e-157, Method: Composition-based stats. Identities = 117/507 (23%), Positives = 212/507 (41%), Gaps = 26/507 (5%) Query: 255 MWGAMRYGYKLISLLWAVVLM-----ISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIV 309 M + ++ + +W + + + + +YP + T+ S + +I Sbjct: 541 MLASGQHDRNFYATMWEAIETEGRWQGEVWNRRKDGSLYPEWLLIQTMRDSRGTLTHYIG 600 Query: 310 NYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALN--------RALRDAPWSALCYLRI 361 + + T ++ R+Q LA+ DP+ LPN L+ A R AL +L + Sbjct: 601 TFTDL--TERKETEERVQWLAHFDPLTGLPNRTLLHIRSNLAISLAQRRHEPLALMFLDL 658 Query: 362 PGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITAL 421 + + + G + + ++ S L + + + +L G++ L L Sbjct: 659 DNFKNVNDSLGHGVGDELLKQFSQRLVNAVREQDTISRLGGDEFVLVLPGTDTDGAAYLA 718 Query: 422 DSHL----KQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPEN 477 + L +Q+ + + IG++ P + + A + + N Sbjct: 719 ERLLNIAARQYNIERHEINLTVSIGIAM----YPTDGTDFDTLWRSADAAMYRAKQSGRN 774 Query: 478 MQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGEN 535 +Q + + N L++ALE N F L+ QP + + V E L+R Sbjct: 775 DYCFFTTEMQARSARTLQIDNALRRALERNQFSLVYQPQLSLNTNRIVGFEALIRWTHPQ 834 Query: 536 DELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMA-ENRAKMPAHRFAINLSPTSVCQAR 594 PD F+P+A G I WV++ ++ + + ++NLS R Sbjct: 835 FGNTPPDEFIPIAESNGQIIPIGEWVLKTAVRQLRLWQDNGLKDVTISVNLSAVQFRHPR 894 Query: 595 FPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYAS 654 P V +L + + L E+TE A+ N A + L++ G +I+IDDFGTGY+S Sbjct: 895 LPELVMAILEEAGVSPECLQLELTEGVAMENPLAAITVIDELRKKGIRISIDDFGTGYSS 954 Query: 655 YARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAV 714 LK N LKID SF++++ +++ D IV+++ LA M+ VAE VE +E E + Sbjct: 955 LTYLKRFNVYSLKIDRSFVQDLPNDTEDMAIVSAVISLADSLGMITVAEGVETKEQLEFL 1014 Query: 715 LSLGIDYMQGYLIGKPQPLIDTLNEIE 741 S G +QGY + +P + IE Sbjct: 1015 RSRGCTEIQGYYLSRPLQADAVFSFIE 1041 >UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z8G8_9NEIS Length = 887 Score = 559 bits (1441), Expect = e-157, Method: Composition-based stats. Identities = 120/506 (23%), Positives = 208/506 (41%), Gaps = 24/506 (4%) Query: 255 MWGAMRYGYKLISLLWAVVLMIS-----IHSYQNYIPIYPGYTTQLTITSSSYLVFSFIV 309 +W +W +L + + +P + + + ++ Sbjct: 377 LWRTAHQDAAFYRRIWRQLLASGRWEGELWHRKRDGTPFPLWLSISCVRDEQGRPRQYVF 436 Query: 310 NYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVR--------ALNRALRDAPWSALCYLRI 361 + + ++ + +++RLA+ DP+ LPN AL RA R A A+ ++ + Sbjct: 437 VFNDI--SQLKDSQEQLERLAHYDPLTGLPNRHLALARLEHALERARRHAFPLAVMFIDL 494 Query: 362 PGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITAL 421 + + + G + ++ L L + + +L G++ + + Q+ + Sbjct: 495 DRFKTINDSLGHQAGDELLVAIAQRLHQRLRQEDTLARLGGDEFLVVIEEAPVQQVASIA 554 Query: 422 DSHLK----QFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPEN 477 + LK F F G + +G S P + N A + + N Sbjct: 555 HALLKVVDQPFGFSGGG---EAYVGASIGISLYPGDGRSASELIRNADAAMYLAKAQGSN 611 Query: 478 MQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGEN 535 R L R ++++M L++AL F L QP+ + + E+L+R + Sbjct: 612 AYRFYTESLTRAANERLSMETSLRRALRCEEFVLHYQPLVELASGRVLGAEVLVRWQPPG 671 Query: 536 DELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARF 595 + L+ P F+P+A E GL + WV+ + A+NLSP + Sbjct: 672 EALVPPSRFIPLAEETGLIVPLGDWVLHEACRQGKAWLDAGLPLLLAVNLSPRQFLRHDL 731 Query: 596 PVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASY 655 +V + L + QL E+TE + +QA TL L+ LG +AIDDFGTGY+S Sbjct: 732 VGQVRKALQGSGLPPAQLELELTEGALMEQAEQAVKTLHALKRLGVSLAIDDFGTGYSSL 791 Query: 656 ARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVL 715 A LK D LKID SF+R++ +S D +IV +I + R K+ +AE VE + + Sbjct: 792 AYLKRFPLDKLKIDRSFVRDLPRDSSDAEIVTTIIAMVRNLKLEALAEGVETPQQLAFLR 851 Query: 716 SLGIDYMQGYLIGKPQPLIDTLNEIE 741 LG D QGYL P P + Sbjct: 852 QLGCDSGQGYLFSPPLPAEAFERWLR 877 >UniRef50_B2T9B2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=2 Tax=Burkholderiales RepID=B2T9B2_BURPP Length = 1037 Score = 558 bits (1440), Expect = e-157, Method: Composition-based stats. Identities = 119/513 (23%), Positives = 213/513 (41%), Gaps = 30/513 (5%) Query: 258 AMRYGYKLISLLWAVVLMIS-----IHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYM 312 + R+ +W + + + +YP + T + S + V ++ + Sbjct: 523 SGRHDDAFFQEMWEEIHSAGGWQGEVWDRRKNGEVYPKWLTISAVMSDNGTVSHYVGTHH 582 Query: 313 AVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRDAPW--------SALCYLRIPGM 364 + T ++ RI+ LA+ D + LPN L LR A AL ++ + Sbjct: 583 DI--TERKIAEERIKELAFFDALTRLPNRTLLLDRLRQAITASARNEACGALLFIDLDHF 640 Query: 365 EMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTE--SHQERITALD 422 + L G Q+++ L+ + + V ++ G++ + L + QE + Sbjct: 641 KTLNDTLGHDKGDLLLQQVARRLADSVLESDTVARVGGDEFVVVLGNLHKNRQEAANQTE 700 Query: 423 SHLKQF------RFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPE 476 + ++ + + + + R I LL + + + Sbjct: 701 AVGERILAVLGSPYHLGKIEYRTSASIGATVFRGHQASIDELLKQADLA--MYKSKERGR 758 Query: 477 NMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDVYHEILLRMKGEND 536 N R +Q + + A+ L+ A+E N F L Q E L+R + Sbjct: 759 NAVRFFDPDMQTVVVQRAALEAGLRNAIEDNQFLLHYQAQVVGTRVTGAEALVRWQHPQR 818 Query: 537 ELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAK--MPAHRFAINLSPTSVCQAR 594 ++ P F+P+A E GL ++ WV+E +A A+ M A+N+S +A Sbjct: 819 GIVPPAEFIPLAEETGLIVALGSWVLEAACAQLARWAARPDMAHLTIAVNVSVQQFRKAD 878 Query: 595 FPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYAS 654 F V ++ + +L E+TES + NV+ + L+ G A+DDFG GY+S Sbjct: 879 FVDNVLTIIGRTGARPDRLKLELTESVLVDNVQDIIEKMSALKAKGIVFALDDFGIGYSS 938 Query: 655 YARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAV 714 + LK + D LKID SF+R+++ +S D I +I LAR + V+AE VE E R+ + Sbjct: 939 LSYLKRLPLDQLKIDRSFVRDVLVDSNDAVIARTIVALARSLGLGVIAEGVETEAQRDFL 998 Query: 715 LSLGIDYMQGYLIGKPQPLIDT---LNEIEPIR 744 + G QGY +P P+ D LN +E + Sbjct: 999 AAAGCYAYQGYYFCRPLPIEDFEALLNNVETRQ 1031 >UniRef50_A1K4Z0 EAL/GGDEF/PAS/PAC-domain containing signalling protein n=2 Tax=Rhodocyclaceae RepID=A1K4Z0_AZOSB Length = 880 Score = 558 bits (1438), Expect = e-157, Method: Composition-based stats. Identities = 114/507 (22%), Positives = 211/507 (41%), Gaps = 27/507 (5%) Query: 255 MWGAMRYGYKLISLLWAVV-----LMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIV 309 + + R +WA + I + + IYP + + IT V +I Sbjct: 364 VLASGRQDAAFYREMWATLGKRGQWQGEIWNRRRSGEIYPEWLSITAITEGDGGVSHYIG 423 Query: 310 NYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL--------RDAPWSALCYLRI 361 + + T ++ RI+ LA+ D + LPN L L R++ +A+ +L + Sbjct: 424 IFSDI--TDRKESEARIRHLAHHDALTGLPNRLLLQDRLGQAILKARRNSTQAAVLFLDL 481 Query: 362 PGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITAL 421 + + G + ++++ + + V + G++ + L H + + Sbjct: 482 DRFKTINDTLGHEIGDGLLRQVTQRCLGAVRETDTVARQGGDEFVIVLPDLEHGQDAGTI 541 Query: 422 DSHL-----KQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPE 476 + + R + + IG++ P + + N A + Sbjct: 542 ARKILAALTEPCRLGPHELTVTGSIGIAL----YPGDGADPSMLLRNADAAMYRAKADGR 597 Query: 477 NMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDV--YHEILLRMKGE 534 N + A + ++ + ++L+ AL+ N L QP E LLR + Sbjct: 598 NGFQFYAADMNTHSLGELLLEHQLRGALDRNELRLYFQPKVNAADGCIEGCEALLRWQHP 657 Query: 535 NDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAEN-RAKMPAHRFAINLSPTSVCQA 593 + L++P F+P A E GL I WV+ + + A + A+NLS Sbjct: 658 DLGLLAPGRFVPAAEESGLIVPIGEWVLREACRQLRAWIDAGLAPVPVAVNLSGQQFAHQ 717 Query: 594 RFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYA 653 V + LA++++ A L E+TE+ + ++++ TL L+ +G +AIDDFGTGY+ Sbjct: 718 DIVALVREALAEHRLPAPMLELELTETMLMRDLERTIATLAELRAMGVTLAIDDFGTGYS 777 Query: 654 SYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREA 713 S A L+ + + LKID SF+ +I S D +I ++ LA + V AE VE + Sbjct: 778 SLAYLRQFDVNALKIDRSFVHDIRPGSSDGKIATAVIALAHNLGLTVTAEGVETAAQQHF 837 Query: 714 VLSLGIDYMQGYLIGKPQPLIDTLNEI 740 + G D +QG+L G+P+P + Sbjct: 838 LARHGCDQLQGFLFGQPEPAEAFAQRL 864 >UniRef50_C5V7A4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gallionellaceae RepID=C5V7A4_9PROT Length = 1013 Score = 558 bits (1438), Expect = e-157, Method: Composition-based stats. Identities = 120/510 (23%), Positives = 217/510 (42%), Gaps = 36/510 (7%) Query: 255 MWGAMRYGYKLISLLWAVVLM-----ISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIV 309 + R+ +W + + + + IYP Y + V +++ Sbjct: 506 FLASGRHDAGFYQSMWEGLNEKGKWEGEVWNRRKDGEIYPEYLLISAVKDIKNEVANYVA 565 Query: 310 NYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL--------RDAPWSALCYLRI 361 + + T +A I++LA+ DP+ LPN R L L R+ AL ++ + Sbjct: 566 TFRDI--TANKAAESEIKKLAFYDPLTLLPNRRLLTDRLNHALASSARNRNIGALLFIDL 623 Query: 362 PGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITAL 421 + L G + ++++ L + + + +L G++ + L S A Sbjct: 624 DNFKTLNDTLGHDMGDALLKQVALRLKSCIREDDTLARLGGDEFVVILENLSELAMDAAT 683 Query: 422 DSHL----------KQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIV 471 + L + + IGV+ + L + EL A++++ Sbjct: 684 KAELIGEKILAALNQVYPLASQEYHGAASIGVTLFAGHA------LSIDELMKQADIAMY 737 Query: 472 TNAP--ENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITG-MRGDVYHEIL 528 + N R + Q+ + ++ + L++A++ L Q + + E L Sbjct: 738 QSKKSGRNTLRFFDLDTQKIINERAELEIELRKAVDKKQLHLHYQIQLNSVGTPLSAEAL 797 Query: 529 LRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAK--MPAHRFAINLS 586 +R LISP F+P+A + GL I WV++ + + + A+N+S Sbjct: 798 IRWVHPVRGLISPAHFIPLAEDTGLILPIGQWVLDTACAQLHSWQDERFTQDLTLAVNVS 857 Query: 587 PTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAID 646 Q F V + + ++ I L E+TES + N++ +T+ L+E+G Q ++D Sbjct: 858 AKQFHQKNFVALVKETVQRHAINPKLLKLELTESMLVENIEDIIVTMNALREMGIQFSLD 917 Query: 647 DFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVE 706 DFGTGY+S LK + + LKID SF+R + S+S D IV +I +A + V+AE VE Sbjct: 918 DFGTGYSSLQYLKRLPLNQLKIDQSFVRELSSSSSDRAIVRTIVAMAESLNLNVIAEGVE 977 Query: 707 NEEIREAVLSLGIDYMQGYLIGKPQPLIDT 736 EE + +G +Y QGYL GKP P+ Sbjct: 978 TEEQHTLLQDIGCNYYQGYLFGKPMPIEQL 1007 >UniRef50_Q47BF2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47BF2_DECAR Length = 1038 Score = 557 bits (1437), Expect = e-157, Method: Composition-based stats. Identities = 131/514 (25%), Positives = 221/514 (42%), Gaps = 37/514 (7%) Query: 255 MWGAMRYGYKLISLLWAVVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAV 314 +W +++ +W + + IYP + T + + F+ +++ + Sbjct: 539 LWTSLKENGLWRGEIW---------NRRKNGEIYPEWLTISAVRGQHGEITHFVSSFLDI 589 Query: 315 LATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL--------RDAPWSALCYLRIPGMEM 366 T+++ +IQ LA DP+ HLPN R LN L R +AL ++ + +M Sbjct: 590 --TKRKEAEEQIQFLALYDPLTHLPNRRLLNERLSKALTSSGRQRRHAALLFIDLDNFKM 647 Query: 367 LVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQ--------ERI 418 + + G + ++++ L + + V +L G++ + L S E I Sbjct: 648 INDSMGHDIGDLLLRQVALRLRESVRSNDTVSRLGGDEFVILLEELSPNIHDATTQIEHI 707 Query: 419 TA--LDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPE 476 LDS ++ ++F IG I LL + + A + Sbjct: 708 AQKMLDSLVQPYKFGEFSHHCTASIGA--IPFMDATETIESLLKSADMA--MYKAKAAGK 763 Query: 477 NMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDV-YHEILLRMKGEN 535 N +Q E++ + A+ L+QA F L QP G V E L+R + Sbjct: 764 NRLFFFDPAMQTEVEARAALERDLRQAQREKQFVLYLQPQVDQSGHVSGAEALIRWQHPT 823 Query: 536 DELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAK--MPAHRFAINLSPTSVCQA 593 LI P F VA E L I WV+E + + + AIN+S Sbjct: 824 HGLILPGEFTHVAEETRLILPIGQWVLEEACKQLVIWQKNPDTAHLTLAINVSALQFRNP 883 Query: 594 RFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQ-ELGCQIAIDDFGTGY 652 F +V++ + + A +L E+TES L ++ +Q L+ +LG +++DDFGTGY Sbjct: 884 DFVDDVARAIHESGALASRLKLEITESLLLEDIDGTIERMQVLKNQLGVGLSLDDFGTGY 943 Query: 653 ASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIRE 712 +S + LK + D +KID SF+++I N D I ++ L R + V+AE VE E R+ Sbjct: 944 SSLSYLKQLPLDQIKIDRSFVKDIHCNPNDAAIAEAVIALGRSFSLNVIAEGVETIEQRD 1003 Query: 713 AVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIRES 746 A+++ G QGYL G+P P+ P R S Sbjct: 1004 ALIARGCLTFQGYLFGRPGPIDAFPACRPPQRNS 1037 >UniRef50_C6NZZ7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Bacteria RepID=C6NZZ7_9PROT Length = 1152 Score = 557 bits (1436), Expect = e-157, Method: Composition-based stats. Identities = 124/454 (27%), Positives = 205/454 (45%), Gaps = 29/454 (6%) Query: 312 MAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL--------RDAPWSALCYLRIPG 363 + T ++ I+ LA+ DP+ HLPN R L L R AL ++ + Sbjct: 694 TGMNITDRKRAEEEIKSLAFYDPLTHLPNRRLLVDRLQHALASSTRSGREGALLFIDLDN 753 Query: 364 MEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDS 423 + L G + Q+++ L+ + G+ V +L G++ + L S Q A + Sbjct: 754 FKTLNDTLGHDIGDLLLQQVALRLASCVREGDTVARLGGDEFVVMLEELSEQTLEAAAQT 813 Query: 424 HL----------KQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIV-- 471 + + P IG + + + EL A++++ Sbjct: 814 ESIGEKILLTLNQPYLLAAHEYRNSPSIGATLF------GNKPQSIEELLKQADIAMYQA 867 Query: 472 TNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQ-PITGMRGDVYHEILLR 530 A N R +Q + + + L +ALE++ F L Q +T + E L+R Sbjct: 868 KKAGRNTLRFFDPQMQETVIARALLERELSKALENDQFQLYYQIQMTDLNEPFGAEALIR 927 Query: 531 MKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAEN--RAKMPAHRFAINLSPT 588 LI P+ F+P+A E GL I +WV++ + A A+N+S Sbjct: 928 WIHPERGLIPPNHFIPLAEEVGLILPIGLWVLDTACNQIKIWEKNASTRELVLAVNVSAR 987 Query: 589 SVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDF 648 S Q F ++ +L ++ I +L E+TES L +++Q + L++LG Q A+DDF Sbjct: 988 SFFQDDFVTQIQTVLQRHAINPKRLKLEITESMMLNSIEQTIEKMNALKKLGVQFAMDDF 1047 Query: 649 GTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENE 708 GTGY+S LK + D LKID SF+R+I ++S D IV +I +A + V+AE VE E Sbjct: 1048 GTGYSSLQYLKRLPLDQLKIDQSFVRDIATDSSDKAIVTTIVAMAHSLNLDVIAEGVETE 1107 Query: 709 EIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEP 742 + R+ ++ G QGYL GKP P+ ++P Sbjct: 1108 QQRQLLIESGCSQYQGYLFGKPAPIRQFEESLKP 1141 >UniRef50_A1TX84 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TX84_MARAV Length = 890 Score = 557 bits (1435), Expect = e-157, Method: Composition-based stats. Identities = 116/487 (23%), Positives = 205/487 (42%), Gaps = 18/487 (3%) Query: 272 VVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAY 331 + +Y+ ++ + + + FI + V T ++ ++ A Sbjct: 408 GSARAILRNYRKDGSLFWNEVALAAVHNEHGEIAHFISVFNDV--TDRKRYEAALEYQAN 465 Query: 332 VDPVVHLPNVRALNRAL--------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKL 383 D + LPN L L R+ A+ L + + + G + Q++ Sbjct: 466 HDDLTGLPNRNLLRDRLEHAITKATREHTKLAVLLLDLDQFKRVNDGLGHKIGDTLIQRV 525 Query: 384 SHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHL-KQFR--FFWDGMPMQPQ 440 + +S + + V +L G++ + + L L +QFR +G + Sbjct: 526 ASRMSQCVRDSDTVARLGGDEFMILSTDIRDERAAATLAQKLLRQFRQKVAINGHEIIAS 585 Query: 441 IGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRL 500 + ++ L +T + + N + + + +++++ + L Sbjct: 586 ASIGIAMFPKDGDNGDELFRNADTA--MYRAKDVGRNGFQFYSAEMNNRMRERLYLEQSL 643 Query: 501 QQALEHNHFFLMAQPITGMRGDV--YHEILLRMKGENDELISPDSFLPVAHEFGLSSSID 558 + A+ + L QP + E L+R + +ISP F+P+A E GL I Sbjct: 644 RNAIGLHQLSLWYQPKLDLASGSVKSAEALIRWRHPQLGMISPGDFIPIAEETGLILPIG 703 Query: 559 MWVIEHTLQFMAENRAK-MPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEV 617 WVIE + +A+ R + R AIN+S + + +V Q L ++ L EV Sbjct: 704 AWVIEEASRQLAKWRDQENQDIRVAINISAYQLSHGKLTDQVIQALDSLGLDPQSLTIEV 763 Query: 618 TESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIV 677 TE+ + + +A LQ L+E+G ++A+DDFGTGY+S LK D+LKID SF+ +I Sbjct: 764 TETAIMPQMDKAVCELQSLREMGIRVALDDFGTGYSSLTYLKRFPIDILKIDRSFVSDIA 823 Query: 678 SNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTL 737 + IV +I +LA M VVAE VE E E + + G D +QGY KP P + L Sbjct: 824 DDEESGAIVKTIINLAHNLNMTVVAEGVETEAQLEFLRTNGCDEVQGYYFCKPLPSEECL 883 Query: 738 NEIEPIR 744 + R Sbjct: 884 EFLRCRR 890 >UniRef50_Q3A4W5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A4W5_PELCD Length = 1274 Score = 555 bits (1432), Expect = e-156, Method: Composition-based stats. Identities = 122/524 (23%), Positives = 216/524 (41%), Gaps = 32/524 (6%) Query: 230 LCMPLNEKSTIFSTNYTLSLLLPLMMWGAMRYGYKLISLLWAVVLMISIHSYQNYIPIYP 289 L + + I + L + +W + G + L + + I+ Sbjct: 724 LEEVIAQNPRILKSGNLLPSVYDS-LWKTITSGKEWYGEL---------ENKRKDGSIFW 773 Query: 290 GYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVR------- 342 + + S + +FI + T+++ +R++ +A D + L N Sbjct: 774 ESASISPLFDESGKIINFIGVKEDI--TQRKLNEKRLEYMATHDGLTGLANRTLLYDHLE 831 Query: 343 -ALNRALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLS 401 AL+++ R A+ L + +++ + G ++ Q + + L + + V +L Sbjct: 832 IALHQSQRSKKLVAVILLDLDRFKVINDSLGHLVGDQVLKAVGQRLKQYVRSTDTVARLG 891 Query: 402 GNDLALRLNTESHQERITALDSHLK---QFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLL 458 G++ + L + +L FF G + C + +L Sbjct: 892 GDEFVVLLTDVRDTTAAGKIAHNLLRKLNEPFFLHGRELYVSASFGICLSETDNVDGTIL 951 Query: 459 LGELNTVAELSIVTNAPEN-MQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPIT 517 L A++++ E + + L + M N L+QALE N F L QP Sbjct: 952 L----RNADIAMYKAKAEGCGLYFYSHEMNEHLIKTLEMENSLRQALEKNEFQLYYQPKV 1007 Query: 518 GMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENR-A 574 + E LLR + +I P F+P+A E GL I WV+ + Sbjct: 1008 EHATGRIIGCEALLRWRHPQRGMIPPSEFIPLAEETGLIVQIGHWVLAEACRQSKIWETE 1067 Query: 575 KMPAHRFAINLSPTSVCQ-ARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITL 633 +P A+N+S Q V L + Q+ QL E+TES + + A+ T+ Sbjct: 1068 GLPPLTMAVNISARQFYQGENLIQAVKSTLERSQLVPSQLELELTESMVMKDAVNAERTM 1127 Query: 634 QHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLA 693 + +++LG +++DDFGTGY+S L++ D LKID SFI +I S++ I+ SI +A Sbjct: 1128 RKIKQLGVSLSLDDFGTGYSSLNYLRSFPVDSLKIDRSFILDIASDASSAAILNSIIAIA 1187 Query: 694 RMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTL 737 + VAE VEN + V + G +Y+QGYL +P P D + Sbjct: 1188 HTLGLQTVAEGVENNDQLALVANCGCNYIQGYLFSRPLPPEDFV 1231 >UniRef50_C6P6Y2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6Y2_9PROT Length = 814 Score = 555 bits (1431), Expect = e-156, Method: Composition-based stats. Identities = 126/479 (26%), Positives = 207/479 (43%), Gaps = 31/479 (6%) Query: 291 YTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL-- 348 Y T + + I + T +A +I LA+ DP+ LPN R L L Sbjct: 344 YITCTPFHDHNGQIAGGIAIVQDI--TEHKAAEEKINNLAFYDPLTGLPNRRLLLDRLQH 401 Query: 349 ------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSG 402 R AL ++ + + L G + ++++ L+ + G+ + +L G Sbjct: 402 ALASSARSGREGALLFIDLDNFKALNDTLGHDMGDLLLRQVAQRLASCVREGDSIARLGG 461 Query: 403 NDLALRLNTESHQERITALDSHLK----------QFRFFWDGMPMQPQIGVSYCYVRSPV 452 ++ + L + A + ++ P IG + Sbjct: 462 DEFVVMLEDLGGHDLEAAAQTEAVGEKILAMLGLPYQLVAHEYRCTPSIGATLFSGH--- 518 Query: 453 NHIYLLLGELNTVAELSIV--TNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFF 510 L EL A++++ A N R +Q + +VA+ L +AL+ F Sbjct: 519 ---ELAKEELLKRADIAMYQAKQAGRNTVRFFDQQMQDAVTARVALEGELHKALDRQQFR 575 Query: 511 LMAQPITGMRGD-VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFM 569 L Q G + E L+R L+ PD F+ +A E L I WV++ + Sbjct: 576 LHYQIQVDASGRPLGAEALIRWMHPERGLVPPDQFIGMAEETDLILPIGQWVMDTACAQL 635 Query: 570 AENRAKMP--AHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVK 627 + P A+N+S T Q F +V + ++ I+ L E+TES L N++ Sbjct: 636 KTWQQHAPTRDLVLAVNVSATQFHQLDFVFQVRATVQRHAIDPKLLKLELTESMLLENIE 695 Query: 628 QAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVA 687 T+ L+E+G Q ++DDFGTGY+S LK + D +KID SF+R+I S+S D +IV Sbjct: 696 DTIRTMNALKEIGVQFSLDDFGTGYSSLQYLKRLPLDQIKIDQSFVRDIASDSNDREIVG 755 Query: 688 SICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIRES 746 +I +A+ + V+AE VE EE R+ + G + QGYL GKP P+ ++P R S Sbjct: 756 TIIAMAQNLYLDVIAEGVETEEQRQFLQDNGCTHFQGYLFGKPVPVEQFEAMLQPDRAS 814 >UniRef50_Q3JAR2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Nitrosococcus oceani RepID=Q3JAR2_NITOC Length = 944 Score = 555 bits (1431), Expect = e-156, Method: Composition-based stats. Identities = 117/500 (23%), Positives = 215/500 (43%), Gaps = 31/500 (6%) Query: 258 AMRYGYKLISLLWAVVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLAT 317 A++ + LW S + IYP + T + +S + F+ + + T Sbjct: 453 AIKSTGQWQGELW---------SQRKNGEIYPLWVTANAVRNSKEEITHFVAIFSDI--T 501 Query: 318 RQRAVVRRIQRLAYVDPVVHLPNV--------RALNRALRDAPWSALCYLRIPGMEMLVK 369 ++ +R+ LA+ D + LPN A++ A R A+ ++ + + + Sbjct: 502 LRKQTEQRLYYLAHHDALTGLPNRSLFLDRLEHAIHHAQRHHHRIAVLFIDLDRFKFIND 561 Query: 370 NYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHL---- 425 G + ++++ + + + + +L G++ + + + I+ + + Sbjct: 562 TLGHPIGDILLKQVAERMRLNIRAEDTIARLGGDEFTVIIENFTDTSAISLITQKIISAC 621 Query: 426 -KQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAM 484 K F + + + IGVS + L + A + ++ + Sbjct: 622 EKPFNIKGNELFVSASIGVSLYPEDGHEASMLLQRAD----AAMYQAKKRGKSCCQFFTT 677 Query: 485 YLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPD 542 + +++A+ N L++AL F L QPI M V E L+R LISP+ Sbjct: 678 EINTAATEQLALKNLLRRALARKEFQLYYQPIINMESGAIVSVEALIRWVDPELGLISPN 737 Query: 543 SFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMP-AHRFAINLSPTSVCQARFPVEVSQ 601 +F+P+A E GL + WV++ P R AINLS + Q F VS+ Sbjct: 738 TFIPLAEENGLILPLGEWVLQTACTQAKIWNQSNPYPVRIAINLSARQLEQTDFSERVSE 797 Query: 602 LLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNV 661 +L K L E+TES + ++ + TL L+++GC++++DDFGTGY+ A LK Sbjct: 798 ILKKTPFPTDHLELELTESMLINRMESSLKTLNTLKKMGCRLSLDDFGTGYSPLAYLKRF 857 Query: 662 NADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDY 721 D +KID SF++ I + D I ++ +A K V+A+ VE E + + +D Sbjct: 858 PIDTVKIDRSFVQGISIDPDDAAITTAVTTMAHSLKRAVIAKGVETREQLNFLNEIKVDE 917 Query: 722 MQGYLIGKPQPLIDTLNEIE 741 QGY I P P + ++ Sbjct: 918 AQGYFISYPVPAEELTQKLR 937 >UniRef50_Q20JY5 Sensory box/GGDEF family protein n=1 Tax=uncultured bacterium RepID=Q20JY5_9BACT Length = 874 Score = 555 bits (1430), Expect = e-156, Method: Composition-based stats. Identities = 111/468 (23%), Positives = 198/468 (42%), Gaps = 32/468 (6%) Query: 299 SSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRD-------- 350 + + I+ + T ++ I+ LAY D + L N ++ L D Sbjct: 411 DNHDKLQGSIITLQDI--TERKKTEEEIKFLAYHDVLTGLLNRKSFYTRLEDELIRSYSY 468 Query: 351 --------APWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSG 402 AL +L + + + G + + + ++ L L + +++L G Sbjct: 469 DGDRRRIKGHKWALFFLDVDRFKYVNDTLGHDVGDELLKVVAVRLKNCLRKSDYIFRLGG 528 Query: 403 NDLALRLNTESHQERITALDSHLK-----QFRFFWDGMPMQPQIGVSYCYVRSPVNHIYL 457 ++ + LN + + + ++ R + + IG+S + + Sbjct: 529 DEFTIILNDLTDDTDMAKVAQKIRKAIARPCRIKDHELYITVSIGISI--YPDDGDDVET 586 Query: 458 LLGELNTVAELSIVTNAPEN-MQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPI 516 L+ A++++ EN R + R+ +++ + N L+ AL+H+ + QP+ Sbjct: 587 LVKN----ADIAMYAAKEENQGYRFFIEEMNRKTLERMMLENNLRNALQHDQLIIYYQPL 642 Query: 517 TGMRGDV-YHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFM-AENRA 574 + E LLR LISP F+P+A E GL I WV+ Q + Sbjct: 643 VDSTNQIVGMEALLRWHHPELGLISPSQFIPLAEETGLIVPIGKWVLRCACQQARKWHEM 702 Query: 575 KMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQ 634 A+NLS + + Q+L + L EVTES + + +QA ++ Sbjct: 703 GYTRFYVAVNLSVRQFREPDLVETIEQILEATDLPPDCLKLEVTESGIMEHPEQAIAKMK 762 Query: 635 HLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLAR 694 L+ G +IDDFGTGY+S + LK D LKID SF+ + +N D +I+ +I +AR Sbjct: 763 MLRAKGIHFSIDDFGTGYSSLSYLKRFPIDTLKIDRSFVIDSTTNKDDQEIIKTIIAMAR 822 Query: 695 MKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEP 742 M VAE VE +E ++ ++ G MQGY G+P P + ++ Sbjct: 823 NLGMDTVAEGVEAKEQQDFLIHHGCHMMQGYYFGRPMPAEKFEDMLQT 870 >UniRef50_C9Y9D8 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y9D8_9BURK Length = 897 Score = 555 bits (1430), Expect = e-156, Method: Composition-based stats. Identities = 117/455 (25%), Positives = 201/455 (44%), Gaps = 31/455 (6%) Query: 306 SFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRD--------APWSALC 357 +F+V + T+QR I+RLA+ DP+ LPN R L +R AL Sbjct: 441 TFVVTLRDI--TQQRQDEEEIRRLAFYDPLTGLPNRRLLMDRVRQAMVNSARLGQHGALM 498 Query: 358 YLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQER 417 +L + ++L G + + Q++++ L + G+ V +L G++ + L S Sbjct: 499 FLDLDHFKLLNDTLGHDVGDELLQQVAYRLRNCVREGDSVARLGGDEFVVLLEGLSDNRT 558 Query: 418 ITA----------LDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAE 467 A LD+ + G P IG+ + +L A+ Sbjct: 559 DAANQAEVVAHKILDALALPYSLRGHGYNSTPSIGIVVFMEDHET------MDDLLKKAD 612 Query: 468 LSIV--TNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDV-Y 524 +++ A N R +Q + + ++ L+ + F L Q +G Sbjct: 613 VAMYQAKAAGRNTARFFDPVMQAAVTTHAELAKEIRLGLQRHEFVLHYQVQIDSQGRCTG 672 Query: 525 HEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAK--MPAHRFA 582 E L+R L+SP F+P+A E G+ + WV+E Q + E A Sbjct: 673 AEALVRWNHRVRGLVSPAHFIPLAEETGMILPLGEWVMESACQQLVEWSRNPMTAHWTLA 732 Query: 583 INLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQ 642 +N+S + + Q F V + L + A QL E+TES + +V+ + + ++ELG Sbjct: 733 VNVSASQLAQPEFVASVREALQRSGAPAGQLKLELTESMLVDDVEDIIVKMMAIKELGVS 792 Query: 643 IAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVA 702 ++DDFGTGY+S + LK + LKID SF+R+++++ D I ++ L + V+A Sbjct: 793 FSLDDFGTGYSSLSYLKRLPLSQLKIDQSFVRDVLTDPSDAVIARTVVALGHSLGLTVIA 852 Query: 703 EYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTL 737 E VE E R+A+ ++ D QGY G+P P + Sbjct: 853 EGVETAEQRDALAAMQCDAFQGYYFGRPAPADALI 887 >UniRef50_Q0AIX2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=6 Tax=Proteobacteria RepID=Q0AIX2_NITEC Length = 791 Score = 555 bits (1430), Expect = e-156, Method: Composition-based stats. Identities = 123/510 (24%), Positives = 212/510 (41%), Gaps = 25/510 (4%) Query: 255 MWGAMRYGYKLISLLWAVVLM-----ISIHSYQNYIPIYPGYTTQLTI-TSSSYLVFSFI 308 + + + +WA + + + + IYP + T + SS S Sbjct: 277 IIKSGLHDKTFYQAMWATLKATGHWSGEVWNRRKNGEIYPQWLTINAVCIDSSCCDESNS 336 Query: 309 VNYMAVLA--TRQRAVVRRIQRLAYVDPVVHLPNV--------RALNRALRDAPWSALCY 358 NY+ V ++ + ++ +LA+ DP+ LPN +A+ RA R + Y Sbjct: 337 CNYVGVFTDISQIKQSEAQLAQLAHYDPLTGLPNRLLAQSQLHQAIERAQRHGRLVGVLY 396 Query: 359 LRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQER- 417 + + + + + G + + KL+ + + + + +L G++ L L Sbjct: 397 IDLDRFKNVNDSLGHPVGDELLIKLAERMKKRVREEDTLARLGGDEFLLVLEDVRDLGDP 456 Query: 418 ---ITALDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNA 474 +L + L G + + ++ L+ + + Sbjct: 457 AFVAQSLINLLTSPFVLPSGHEIFINASIGISLFPEDASNATELIQHSDMA--MYQAKKE 514 Query: 475 PENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMK 532 N R L +++ M NRL+ AL L QP+ R V E L+R + Sbjct: 515 GRNTYRYHTEALSVAANERLIMENRLRYALSAEELILHYQPLVDARTGYVVGVEALVRWQ 574 Query: 533 GENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAEN-RAKMPAHRFAINLSPTSVC 591 ++ P F+P+A E GL + WV+ + A + A+NLS Sbjct: 575 PPGKAMVPPGKFIPIAEETGLIVPLGEWVLRTACKQARAWIDAGLSPLVMAVNLSVRQFQ 634 Query: 592 QARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTG 651 V ++L + Q+ A L E+TES + +V+Q+ TL L+ LG +AIDDFGTG Sbjct: 635 SENLVGMVQRILEETQLPADYLELELTESMFMEHVEQSIETLNKLKTLGVHLAIDDFGTG 694 Query: 652 YASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIR 711 Y+S LK D LKID F+R++ + D +I A+I +AR K+ V+AE +E+EE Sbjct: 695 YSSLIYLKRFPIDKLKIDQRFVRDLADDHNDREIAATIIAMARGLKLGVLAEGIESEEQL 754 Query: 712 EAVLSLGIDYMQGYLIGKPQPLIDTLNEIE 741 + DY QGYL +P P I+ + Sbjct: 755 AFLRQQDCDYYQGYLFHRPVPAIELEAWLR 784 >UniRef50_Q5P4Q9 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P4Q9_AZOSE Length = 813 Score = 554 bits (1429), Expect = e-156, Method: Composition-based stats. Identities = 118/499 (23%), Positives = 203/499 (40%), Gaps = 24/499 (4%) Query: 269 LWAVVLMISIHSYQN-----YIPIYPGYTTQLTITS-SSYLVFSFIVNYMAVLATRQRAV 322 +WA+V S + YP + + + FI + + T ++ Sbjct: 319 VWAIVGEHGSWSGETTGVRCGGQRYPRTLMINGVRDPETREITHFIAIFSDI--TARKRA 376 Query: 323 VRRIQRLAYVDPVVHLPNVRAL--------NRALRDAPWSALCYLRIPGMEMLVKNYGIM 374 IQ LAY D + L N +L A R+ A+ +L + + + + G Sbjct: 377 EADIQHLAYHDTLTGLANRFSLTARLQLSVAEARRNGQRLAVMFLDLDRFKHINDSLGHP 436 Query: 375 LRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLK---QFRFF 431 + + ++++ L + + V +L G++ + L +T + + L + Sbjct: 437 VGDELLKQVARRLRDAVRETDTVARLGGDEFVVVLQGIGGAHDVTHVAAKLLAQLSAPYC 496 Query: 432 WDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELK 491 D + + L+ +T + A + + R Sbjct: 497 VDTTELHTTASIGISLFPDDSADPAALMRNADTA--MYHAKAAGRAKFQFYTDEMNRAAT 554 Query: 492 DKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAH 549 ++ + +L+ A+ F L QP R E L+R + D LI+P F+P+A Sbjct: 555 ARLDLERKLRGAVARGEFELWYQPQFDSRHGHLTGLEALVRWRHPQDGLIAPLRFIPLAE 614 Query: 550 EFGLSSSIDMWVIEHTLQFMAEN-RAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQI 608 E G+ I WV+ + + A +P R ++NLS + + V LA + Sbjct: 615 ETGVIVEIGTWVLREACRQARQWLDAGLPELRISVNLSVRQLREKCLVDTVWTTLAASGL 674 Query: 609 EAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKI 668 L E+TES + N +A LQ L+ LG +IAIDDFGTG++S + LK D LKI Sbjct: 675 RPGLLELEITESAVMDNPDEAVALLQALKNLGVRIAIDDFGTGHSSLSYLKLFPLDHLKI 734 Query: 669 DGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIG 728 D SFI +I ++ D IVA+ LA + V+AE VE+ + LG D +QG+ Sbjct: 735 DRSFISDIEHDANDTMIVAAAVSLAHNLGLSVIAEGVESAVQVARLRELGCDELQGFHFS 794 Query: 729 KPQPLIDTLNEIEPIRESA 747 +P N + + +A Sbjct: 795 RPVTADVVENLLRSVWRTA 813 >UniRef50_Q31GH8 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=3 Tax=cellular organisms RepID=Q31GH8_THICR Length = 1466 Score = 553 bits (1427), Expect = e-156, Method: Composition-based stats. Identities = 108/508 (21%), Positives = 206/508 (40%), Gaps = 24/508 (4%) Query: 242 STNYTL--SLLLPLMMWGAMRYGYKLISLLWAVVL-----MISIHSYQNYIPIYPGYTTQ 294 + Y++ +L M + R+ + +W + I + + I+P + + Sbjct: 946 ISGYSVEETLGKTPRMLASGRHSREFYQNVWKSIKEKGHWQGEIWNRRKNGEIFPEWLSI 1005 Query: 295 LTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL------ 348 +S V ++ + + ++ + +I+ LA+ DP+ L N L L Sbjct: 1006 SRGLDTSGNVTEYVGIFNDI--SKVKESEEKIKHLAHYDPLTGLVNRELLMDRLNHSIST 1063 Query: 349 --RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLA 406 R+ AL ++ + + + G + Q ++ + +L + + + G++ Sbjct: 1064 ADRNNTPLALLFIDLDHFKNVNDTLGHQVGDQLLIEVGQRILKILRDEDTIARQGGDEFI 1123 Query: 407 LRLNTESHQERITALDSHLKQFRFFWDGMPMQPQI--GVSYCYVRSPVNHIYLLLGELNT 464 + L + + L+ + P + I + LL +T Sbjct: 1124 VVLPDTGENGAVHVAEKILESISDQLNLKPYKLFITPSIGIAVYPQDGKDADSLLKNADT 1183 Query: 465 VAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD-- 522 + N N+ R M +Q + + + L+ AL F L QP T + Sbjct: 1184 A--MYQAKNDGRNVYRFFTMEMQAHSSRIMQIESALRVALFDQQFELYYQPQTCAKSGSI 1241 Query: 523 VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKM-PAHRF 581 + E L+R +SP F+PVA + G +I WV+ ++ + P + Sbjct: 1242 IGVEALIRWNHPEMGPVSPQEFIPVAEQSGQILAIGWWVLRTAIRQIKIWSEHGKPCIKV 1301 Query: 582 AINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGC 641 A+NLS P +V ++L + + L E+TES A+ N + + L G Sbjct: 1302 AVNLSAVQFRYEDLPKQVMKILEEEGVSPEFLELELTESVAMANPEAVIEMMDKLVGHGI 1361 Query: 642 QIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVV 701 +++IDDFGTGY+S + LK LKID SFIR++ +S D I+ +I L++ + + Sbjct: 1362 KMSIDDFGTGYSSLSYLKRFKVSKLKIDQSFIRDLAVDSDDRSIIEAIISLSKALGLKTI 1421 Query: 702 AEYVENEEIREAVLSLGIDYMQGYLIGK 729 AE VE + + + D +QG+ K Sbjct: 1422 AEGVETQAQLDFLQEKQCDEIQGFYYSK 1449 >UniRef50_A1KAZ1 Hypothetical signaling protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KAZ1_AZOSB Length = 952 Score = 553 bits (1427), Expect = e-156, Method: Composition-based stats. Identities = 127/509 (24%), Positives = 228/509 (44%), Gaps = 28/509 (5%) Query: 258 AMRYGYKLISLLWAVVL-----MISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYM 312 + R+ +WA + + + + ++P + T + + V ++ + Sbjct: 450 SGRHDRGFYLSMWAALKEAGHWQGELWNRRKNGELFPEWLTLNAVRNEVGHVTHYVGVFT 509 Query: 313 AVLATRQRAVVRRIQRLAYVDPVVHLPNV--------RALNRALRDAPWSALCYLRIPGM 364 + ++ + R+ LA+ DP+ LPN AL+ A R A+ +L + Sbjct: 510 DI--SKLKQTEDRLDYLAHHDPLTDLPNRLLVLSRLEHALDGAQRRGCRVAVMFLDLDRF 567 Query: 365 EMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSH 424 + + + G + + ++ L L + + +L G++ + L + + Sbjct: 568 KTVNDSLGHAAGDELLRAVAARLRGALREEDTLGRLGGDEFMVLLEHVEAPADAAVVAKN 627 Query: 425 LKQF---RFFW---DGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENM 478 L + F + ++ IG+S+ P + + N A + N Sbjct: 628 LVEVLAAPFALSNGHEVFIRASIGISF----YPDDGDDFMTLVRNADAAMYRAKAQGRNT 683 Query: 479 QRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGEND 536 L R +++A+ RL++ALEH+ F + QP+ G++ + E L+R K + + Sbjct: 684 YGFYTEDLIRSATERLALETRLRRALEHDEFVVYYQPVLGVKDGRLLGAEALVRWKPQGE 743 Query: 537 ELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAEN-RAKMPAHRFAINLSPTSVCQARF 595 ++SP +F+PVA E GL ++ WV+ + + E A + A+NLS + Sbjct: 744 PMVSPAAFIPVAEETGLIVALGEWVLRDACRQVREWIDAGYAFGQVAVNLSAEQFRRQDV 803 Query: 596 PVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASY 655 ++ +LA+ + A QL E+TES+ L + A L+ L++ G +AIDDFGTGY+S Sbjct: 804 SAMLATVLAETGLPATQLELEITESSLLEAGEHAVGLLERLKQQGVGLAIDDFGTGYSSL 863 Query: 656 ARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVL 715 A LK + D LKID SF+++I +S D I ++I +AR M V AE VE E E + Sbjct: 864 AYLKRFSIDKLKIDRSFVQDIADDSNDLAIASAIVAMARALDMAVQAEGVEGEAQLELLR 923 Query: 716 SLGIDYMQGYLIGKPQPLIDTLNEIEPIR 744 LG QGYL P P + +R Sbjct: 924 GLGCGSYQGYLCSPPLPADEFEARFLRLR 952 >UniRef50_Q3SIW6 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q3SIW6_THIDA Length = 1212 Score = 553 bits (1427), Expect = e-156, Method: Composition-based stats. Identities = 113/479 (23%), Positives = 202/479 (42%), Gaps = 18/479 (3%) Query: 280 SYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLP 339 + +YP + + + ++ ++ ++ + T ++ +I+ LAY DP+ L Sbjct: 736 DRRKDGTLYPKWMAVSVVRDADGVLTHYVASFTDI--TERKLAEAQIKHLAYHDPLTGLS 793 Query: 340 NV--------RALNRALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLL 391 N + L A R+ A+ +L + + + + G L Q +++ L + Sbjct: 794 NRFSLQTQLDQTLALARREQRTLAVVFLDLDRFKSINDSLGHALGDQLLVEVARRLRDNV 853 Query: 392 EPGEDVYQLSGNDLALRLNTESHQERITALDSHLKQF---RFFWDGMPMQPQIGVSYCYV 448 + V +L G++ + L + L R+ G + + Sbjct: 854 RDSDIVARLGGDEFVVVLTEVGDAAGAARVADKLLGALVPRYRIGGHALHTTASIGISLY 913 Query: 449 RSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNH 508 + L+ +T + + + + + + + ++ + L+ A+E Sbjct: 914 PHDGDDADALMKNADTA--MYHAKSQGRDNVQFFTPEMNQSVLKRLQFDHDLRVAVEAGQ 971 Query: 509 FFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTL 566 F L QP V E L+R + + L+SP F+P+A E GL + WV+ Sbjct: 972 FELHYQPQINSTSGRVVKVEALVRWQHPREGLVSPAEFIPIAEETGLILPLGEWVLNEAC 1031 Query: 567 QFMAENR-AKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTN 625 + + R A + A+NLS + V++ L + +E L E+TES A+ + Sbjct: 1032 RQLRLWRDAGITDLTVAVNLSAHQLHSPALIPMVARTLGNHGLEGADLCLEITESVAMRD 1091 Query: 626 VKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQI 685 + LQ L++LG ++IDDFGTGY+S + LK + D LK+D SF+ I N D I Sbjct: 1092 TTASIAQLQALRDLGIHLSIDDFGTGYSSLSYLKLLPIDTLKLDQSFVCEIEFNPSDVAI 1151 Query: 686 VASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIR 744 A+ LA + VVAE +E E R + S D+MQGYL P P L I + Sbjct: 1152 CAATIALAHSLGLEVVAEGIETETQRRLLASHRCDFMQGYLFSAPLPAERALAYIREQQ 1210 >UniRef50_Q2W807 Predicted signal transduction protein n=4 Tax=Magnetospirillum RepID=Q2W807_MAGSA Length = 880 Score = 553 bits (1425), Expect = e-155, Method: Composition-based stats. Identities = 116/508 (22%), Positives = 208/508 (40%), Gaps = 28/508 (5%) Query: 255 MWGAMRYGYKLISLLWAVVLM-----ISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIV 309 + + + ++ V+ I + + IYP + T I + + + Sbjct: 364 VLKSGHHDETFYKHMYTVLEAQDYWQGEIWNRRKNGEIYPEWLTINVIRDDTGDITQYAA 423 Query: 310 NYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL--------RDAPWSALCYLRI 361 + + T ++ RI+ LAY D + LPN R L R A+ +L + Sbjct: 424 IFSDI--TERKKTEERIKNLAYFDVLTALPNRRLFTDRLQIAIANAHRHGQQLAIMFLDL 481 Query: 362 PGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITAL 421 + + + G + Q + + +S + G+ V +L G++ + L H E + L Sbjct: 482 DLFKRINDSLGHGVGDQVLVETAARISHCVREGDTVARLGGDEFTVLLPELDHLEDVAKL 541 Query: 422 DSHLKQF---RFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENM 478 + F D + + + L+ +T + + N Sbjct: 542 AERVIAHVKQPFLVDDNELYVTTSIGIAVYPEDGTTVEALIKNADTA--MYRAKDLGRNS 599 Query: 479 QRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGEND 536 + + +++ M + L+ AL F L+ Q E L+R Sbjct: 600 YQLYTAAMNARSFERLTMESSLRHALTREEFRLVYQVKVDSEDGRMSGVEALVRWHHPEM 659 Query: 537 ELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRA-KMPAHRFAINLSPTSVCQARF 595 L+SP F+P+A G+ S I WV+ + +P R A+N+S + Sbjct: 660 GLVSPVDFIPLAEAMGVISDIGEWVLRTACRQCKHWMDLGLPPVRIAVNVSAQQFVETDV 719 Query: 596 PVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASY 655 P V++ L + + L E+TE+ + V + L+ L+ +G +I+IDDFGTGY+S Sbjct: 720 PEVVARALRETGLPPQYLELELTETVLMQRVDEVVAVLKSLRAMGVRISIDDFGTGYSSL 779 Query: 656 ARLKNVNADLLKIDGSFIRNIVSN-----SLDYQIVASICHLARMKKMLVVAEYVENEEI 710 + LK + D LK+D SF+ +I +IV++I +LA K+ +AE VE E Sbjct: 780 SYLKRMPIDALKVDRSFVNDIFDGQSKVTEDGAEIVSTIINLAHNLKLKAIAEGVETPEQ 839 Query: 711 REAVLSLGIDYMQGYLIGKPQPLIDTLN 738 E + S G D +QGYLI +P D ++ Sbjct: 840 AEFLRSKGCDEVQGYLISRPVSGEDLIS 867 >UniRef50_A4J477 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Firmicutes RepID=A4J477_DESRM Length = 947 Score = 552 bits (1423), Expect = e-155, Method: Composition-based stats. Identities = 112/436 (25%), Positives = 188/436 (43%), Gaps = 16/436 (3%) Query: 318 RQRAVVRRIQRLAYVDPVVHLPNVR--------ALNRALRDAPWSALCYLRIPGMEMLVK 369 ++ + ++ LAY D + LPN ALN+A R+ A+ +L + + + Sbjct: 504 ERKRIEEILRYLAYHDSLTELPNRTLFNDRLSMALNQAHRNKNKLAVMFLDLDHFKKVND 563 Query: 370 NYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLKQ-- 427 G + Q + ++ S LL G+ + ++ G++ + L+ + E + + + Sbjct: 564 TLGHDIGDQLLKGIAQRFSKLLRKGDTIARIGGDEFTILLHNITRAENASIVADKIIDTL 623 Query: 428 -FRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYL 486 + + LL + A + N + + Sbjct: 624 ANPWIIGNHEFHITTSIGIALYPDDGTDAESLLKNAD--AAMYQAKEMGRNNYQFYTPTM 681 Query: 487 QRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSF 544 + + + N L++AL+ F + QP + V E L+R + +ISP F Sbjct: 682 NAQTLRRFELENNLRRALDRKEFVIYYQPQVEIHTGKIVGVEALIRWQHPQRGMISPAEF 741 Query: 545 LPVAHEFGLSSSIDMWVIEHTLQF-MAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLL 603 +P+A E GL I W++ A R +NLS Q P +S +L Sbjct: 742 IPMAEETGLIIPIGEWILRRACAQNKAWQDRGFSPMRVTVNLSARQFLQPHLPQYISNVL 801 Query: 604 AKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNA 663 + L E+TES A+ +V + TL L+++G +AIDDFGTGY+S LK + Sbjct: 802 EDTGLGPQWLELEITESLAMKDVAFTEKTLIELRKMGITLAIDDFGTGYSSLNYLKRLPI 861 Query: 664 DLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQ 723 D+LKID SFI ++ + S D I+++I L KM VVAE VE +E + D MQ Sbjct: 862 DILKIDRSFIHDLNTESDDVAIISAIITLGHNLKMKVVAEGVETKEQLMFLRQQQCDLMQ 921 Query: 724 GYLIGKPQPLIDTLNE 739 GYL KP P+ + + Sbjct: 922 GYLFTKPLPVRELEQK 937 >UniRef50_C0Z6C0 Probable signaling protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z6C0_BREBN Length = 708 Score = 552 bits (1423), Expect = e-155, Method: Composition-based stats. Identities = 113/454 (24%), Positives = 203/454 (44%), Gaps = 18/454 (3%) Query: 296 TITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVR--------ALNRA 347 I V ++ V T ++ I LAY D + LPN R + +A Sbjct: 251 PIMDEEGNVTKLLLITRDV--TDRKQSEETIHHLAYHDALTDLPNRRMYVQQLSKEMMQA 308 Query: 348 LRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLAL 407 R A+ +L + + + ++G + + S L L+PG+ V +L G++ + Sbjct: 309 KRFQSSLAVLFLDLDRFKDVNDSFGHDVGDMLLIEASKRLQACLKPGDVVARLGGDEFTI 368 Query: 408 RLNTESHQERITALDSHL---KQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNT 464 N + T L + Q F DG + ++ LL +T Sbjct: 369 MQNQLLDRNEATELAEQIMYQLQRPFELDGHVFNVSCSIGIALYPQDGDNPEDLLKRADT 428 Query: 465 VAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDV- 523 L V + +N ++ + +++ M N +++A+E F + QP + Sbjct: 429 A--LYTVKSRGKNGYDFFDPSMEAKSLERILMENEMRKAIEQEQFQIYYQPKIDIATSAM 486 Query: 524 -YHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFA 582 E L+R +I P+ F+P+A E G+ ++ W+++ + + + + Sbjct: 487 TGMEALVRWVHPELGIIPPNRFIPIAEETGMILALGEWILKQACKQNKNWHDQGYTLKVS 546 Query: 583 INLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQ 642 +NLS + Q + +L + ++ L E+TES + +++A LQ ++++G Q Sbjct: 547 VNLSARQIYQKDLVEMIKDILQETKLSPHWLELEITESIFVK-MEEATAVLQQIRDIGIQ 605 Query: 643 IAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVA 702 I+IDDFGTGY+S++ +K++ D +KID SFIR+I N IV +I +A+ M V+A Sbjct: 606 ISIDDFGTGYSSFSYIKSLPVDTIKIDASFIRDIHHNQESQAIVKAIVTIAQSLNMNVIA 665 Query: 703 EYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDT 736 E +E + A+ G D+ QGYL KP P D Sbjct: 666 EGIELHDQVAALKENGCDHGQGYLFSKPLPTDDF 699 >UniRef50_A6T0F0 Sensory box/GGDEF family protein n=2 Tax=Oxalobacteraceae RepID=A6T0F0_JANMA Length = 699 Score = 552 bits (1423), Expect = e-155, Method: Composition-based stats. Identities = 119/461 (25%), Positives = 211/461 (45%), Gaps = 21/461 (4%) Query: 296 TITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRDAPWS- 354 ++ +S + F A+ T ++ IQ A D + LPN L ++ A Sbjct: 243 SVYNSDGTLLFFEGTVEAI--TERKLHEAEIQFQATHDALTGLPNRTLLYDRMQQAVLHS 300 Query: 355 -------ALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLAL 407 A+ +L + + + + G + + + + L+ L + V + G++ L Sbjct: 301 ERYGKLTAIAFLDLDQFKFINDSLGHQVGDELLKITAQRLTSCLRESDTVARQGGDEFVL 360 Query: 408 RLNTESHQERIT-ALDSHLKQFRFFW--DGMPMQPQIGVSYCYVRSPVNHIYLLLGELNT 464 L + ++E IT + L + W + + Q + LL ++ Sbjct: 361 LLTDQPNEEAITHTMQRVLHEVSQPWKANDLEFQITCSIGLTLCPDDGRDAETLLKNADS 420 Query: 465 VAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD-- 522 + N + + + + D++ ++NRL+QA+ + F L QP + Sbjct: 421 A--MYKAKELGRNNFQYFSAEMNSSVTDRLELLNRLRQAITNEDFVLHYQPKVSLASHQI 478 Query: 523 VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQF-MAENRAKMPAHRF 581 + E L+R + ++SP SF+P+A E GL + WV+ + A A P Sbjct: 479 IGAEALVRWNSAHSGMVSPASFIPLAEETGLIIPLGEWVLRTACRQNRAWQDAGYPPIPI 538 Query: 582 AINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGC 641 ++NLSP + + V ++L + +EA L E+TES T+V+++ L L+ LG Sbjct: 539 SVNLSPRQLARGDIVEVVERILTETGLEAQHLELEITESVMTTDVEKSFALLTQLRSLGV 598 Query: 642 QIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVV 701 +I++DDFGTGY+S + LK D LKID SF+R+I ++ IV +I L R + V+ Sbjct: 599 KISLDDFGTGYSSLSYLKRFPVDTLKIDQSFVRDIATDQDSAAIVKAIISLGRNLNLTVL 658 Query: 702 AEYVENEEIREAVLSLGIDYMQGYLIGKPQP---LIDTLNE 739 AE +E E+ + +L+ G D QGYL+ KP P +D L + Sbjct: 659 AEGIETEDQFQFLLANGCDEGQGYLMSKPVPNKNFVDLLTQ 699 >UniRef50_C6P6N2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6N2_9PROT Length = 1043 Score = 552 bits (1422), Expect = e-155, Method: Composition-based stats. Identities = 119/510 (23%), Positives = 217/510 (42%), Gaps = 28/510 (5%) Query: 255 MWGAMRYGYKLISLLWAVVL-----MISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIV 309 ++ + ++ + +W +L I + ++ + + I + ++ + Sbjct: 534 IFQSGKHDAQFYQQMWQSILDDGHWQGEIWDLKKNGELHAKWLSISVIRRADGSIYRHVG 593 Query: 310 NYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRD--------APWSALCYLRI 361 + + T ++ I A D + +LPN R R + AL L + Sbjct: 594 QFSDI--TEKKRKDELIWEQANFDTLTNLPNRRLFADRFRQAISAGARSGRYGALLSLDL 651 Query: 362 PGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITAL 421 + L +G + + +++ L+ + + V ++ G++ + LN ++ A+ Sbjct: 652 DQFKRLNDTFGHSMGDKLLIEVARRLTSCVREEDTVARMGGDEFLVILNGLGSEQNEAAI 711 Query: 422 DSHL--KQFR------FFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTN 473 + L ++ R + D + R + LL ++T + Sbjct: 712 RAELIAEKIRNELCRPYQLDKTEHHSSSSIGIVLFRGHSDDPERLLAHVDTA--MYQSKA 769 Query: 474 APENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD-VYHEILLRMK 532 N +Q L+ + + L+ ALE F L Q G + E LLR Sbjct: 770 KGRNAICFFDSSMQEILEKRGQLETALRGALERKEFLLHYQLQMDSSGRPIGAEALLRWN 829 Query: 533 GENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRA--KMPAHRFAINLSPTSV 590 +SP F+PVA E GL I WV+E +A ++ + A+N+S Sbjct: 830 NAKLGSVSPVQFIPVAEESGLILPIGHWVLETACAQLARWQSDPRFNRLCIAVNVSAIQF 889 Query: 591 CQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGT 650 +A F +V +L + I+ W L E+TES L ++ + + ++ L+ LG + ++DDFGT Sbjct: 890 REAAFVAKVRNVLQQSGIQPWLLKLELTESLVLDDINDSILKMEALKNLGVKFSMDDFGT 949 Query: 651 GYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEI 710 GY+S + L + D LKID SF+R+I ++ D IV +I +A M V+AE VE EE Sbjct: 950 GYSSLSYLSRLPLDQLKIDQSFVRDITTDQHDAAIVQTIISMALSLGMEVIAEGVETEEQ 1009 Query: 711 REAVLSLGIDYMQGYLIGKPQPLIDTLNEI 740 RE + G QGYL KP P+ + ++ Sbjct: 1010 REFLDLRGCQAYQGYLYAKPMPIEELEIKL 1039 >UniRef50_C6NZ79 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZ79_9PROT Length = 923 Score = 552 bits (1422), Expect = e-155, Method: Composition-based stats. Identities = 121/506 (23%), Positives = 201/506 (39%), Gaps = 22/506 (4%) Query: 254 MMWGAMRYGYKLISLLWAVVLMIS-----IHSYQNYIPIYPGYTTQLTITSSSYLVFSFI 308 M + R+ + +W + I IYP + + + V ++I Sbjct: 416 RMLSSGRHDAEFYRAMWDDINQHGYWQGEIWDKHKSGRIYPKWMSITAVRDEHGKVVNYI 475 Query: 309 VNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL--------RDAPWSALCYLR 360 +A T Q + I LAY D + LPN L L RD +L +L Sbjct: 476 S--IARDTTEQTEAEKNIHFLAYYDVLTGLPNRTLLRDRLGQMIAVAHRDKHQFSLIFLD 533 Query: 361 IPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITA 420 + + + + G + + Q ++ + + G+ V +L G++ + L Sbjct: 534 LDRFKYINDSMGHSVGDRLLQSVALRIQDCVREGDTVARLGGDEFIVLLREAGESAASVV 593 Query: 421 LDSHLKQF--RFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENM 478 L + DG + Q + L+ + + N Sbjct: 594 AQKLLIALATPYDLDGQVISTQASIGISIYPDQAQDADTLIKNADMA--MYRAKEEGRNN 651 Query: 479 QRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDV--YHEILLRMKGEND 536 + + + +M L+ ALE FL QP + E L+R Sbjct: 652 FQFFVPEMNFRVDLLFSMEKDLRLALERGELFLQYQPQADLASGTLSGVEALIRWDHPVK 711 Query: 537 ELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRA-KMPAHRFAINLSPTSVCQARF 595 +SP F+PVA E G +I WV+ MAE R M A+NLS + Q Sbjct: 712 GQVSPAEFIPVAEETGQIVAIGEWVLRTACSQMAEWRKTGMHDLTIAVNLSIRQLRQPDL 771 Query: 596 PVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASY 655 + +L + ++A L E+TE + + + A L +Q+LG Q++IDDFGTG++S Sbjct: 772 AELIKSVLLETGLDARHLELEITEGIMMGDNQAAFRFLSEMQDLGVQLSIDDFGTGFSSL 831 Query: 656 ARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVL 715 LK + + LKID SFIR+I ++ D I+ SI L + V+AE VE +E + + Sbjct: 832 NYLKQMPVNKLKIDQSFIRDIETDEGDAAIIRSIISLGHRLNLRVIAEGVETQEQLDFLR 891 Query: 716 SLGIDYMQGYLIGKPQPLIDTLNEIE 741 G D +QGY +P D + ++ Sbjct: 892 IRGCDEIQGYFYSRPLLAEDFMRFVK 917 >UniRef50_Q47A14 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47A14_DECAR Length = 827 Score = 552 bits (1422), Expect = e-155, Method: Composition-based stats. Identities = 125/484 (25%), Positives = 206/484 (42%), Gaps = 36/484 (7%) Query: 280 SYQNYIPIYPGYTTQLTITSSSYLVF--------------SFIVNYMAVLA--TRQRAVV 323 +Q I + ++++L +T + F +Y+ +LA T ++ Sbjct: 332 DFQEQISMRGSWSSELEVTQKNGSNFPAGARINRVDDPQSGLPAHYVWILADITERKQAE 391 Query: 324 RRIQRLAYVDPVVHLPNVRALN--------RALRDAPWSALCYLRIPGMEMLVKNYGIML 375 R++ +A D + LPN AL A R A+ ++ + +++ G + Sbjct: 392 DRMRHIAQHDALTGLPNRLALLMRLAQLLPEARRHGWTVAVMFIDLDRFKIINDTLGHQV 451 Query: 376 RIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHL-----KQFRF 430 + ++++ LS LL + V +L G++ + L + S + + Sbjct: 452 GDEMLREVACRLSNLLRETDFVARLGGDEFVIILPSISSPADAAIVSGKIISALSTAIEA 511 Query: 431 FWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQREL 490 + P IG+S P I L N + A N + A + R Sbjct: 512 EGHELHTSPSIGISIFPDDGPDGDIVL----KNADTAMYHAKAAGRNNYQFFAADMNRTA 567 Query: 491 KDKVAMMNRLQQALEHNHFFLMAQPITGMR--GDVYHEILLRMKGENDELISPDSFLPVA 548 +++ + +L+ A+ N L+ QP E LLR D +ISP F+PVA Sbjct: 568 AERLNIERKLRHAIARNELSLVFQPQFRAEDTTPTGVEALLRWHHPTDGMISPARFIPVA 627 Query: 549 HEFGLSSSIDMWVIEHTLQFMAEN-RAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQ 607 E G+ I WV+ MA A + R A+N+S + + F V+ L Sbjct: 628 EETGMIVEIGDWVLATACHEMARWINAGLKPLRIAVNVSARQLRRRDFCETVANALTTSG 687 Query: 608 IEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLK 667 + A L E+TES+ + N ++A L+ L +G +AIDDFGTGY+S A LK D LK Sbjct: 688 LPAELLELEITESSVMENPQEAIHILERLGRMGVTLAIDDFGTGYSSLAYLKLFPIDHLK 747 Query: 668 IDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLI 727 ID SF+ +I + D I LA + V+AE VE E+ E + + G D +QG+L Sbjct: 748 IDRSFVADIEHDLNDRAIAFGTIALAHSLGLNVIAEGVETEDQHELLRANGCDEVQGFLF 807 Query: 728 GKPQ 731 KP Sbjct: 808 SKPL 811 >UniRef50_Q2W4Z4 Predicted signal transduction protein containing a membrane domain n=4 Tax=Magnetospirillum RepID=Q2W4Z4_MAGSA Length = 831 Score = 551 bits (1421), Expect = e-155, Method: Composition-based stats. Identities = 121/495 (24%), Positives = 214/495 (43%), Gaps = 22/495 (4%) Query: 260 RYGYKLISLLWAVVLM-----ISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAV 314 + + +W + I + + ++ + + + + + + FI ++ + Sbjct: 325 HHDADFYAEIWQAIFRDGRWQGEIWNRRKDGQVFVAWESIVAVYDEAGAIRYFIGSFRDI 384 Query: 315 LATRQRAVVRRIQRLAYVDPVVHLPNV--------RALNRALRDAPWSALCYLRIPGMEM 366 T Q R I RLA+ D + LPN RA+ ALR +AL +L + G + Sbjct: 385 --TEQVEAQRHILRLAHYDVLTDLPNRVLFQDRLERAVVHALRHDRQAALLFLDLDGFKK 442 Query: 367 LVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLK 426 + G ++++ L + + + +L G++ + L+ S + + + Sbjct: 443 VNDTMGHRAGDDLLKEVAVRLRGCVRMTDTIARLGGDEFTVILDEISAANDASMVADKIL 502 Query: 427 ---QFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGA 483 F DG + + LL +T + A + + Sbjct: 503 ASLHAPIFIDGRDVFIGTSIGISLFPIDGTSGDELLKHADTA--MYQAKAAGKGRFNFYS 560 Query: 484 MYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISP 541 + + + ++ + L+QA+E F + QP + + E L+R + +ISP Sbjct: 561 AEMTKREEHRLELETALRQAVEEGQFQVHYQPQKNLATNRVSGFEALVRWQHPRLGMISP 620 Query: 542 DSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQ 601 F+P+A E L IDM+V+ + + R + A+NLS + + P +V Q Sbjct: 621 VDFIPLAEEMHLIDRIDMFVMRQACRKGRQWRDQGYDICMAVNLSGVNFSRDDLPEQVRQ 680 Query: 602 LLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNV 661 +L A L E+TES + + LQ L+ LG ++AIDDFGTGY+S + LK + Sbjct: 681 VLEDTGFPAENLELEITESFVIDLEVDQREVLQRLRALGVKLAIDDFGTGYSSLSYLKRL 740 Query: 662 NADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDY 721 + LKID SF+R+I +S D +V+SI +A + VVAE +E + +LS D Sbjct: 741 PVNTLKIDRSFVRDIARDSRDMMLVSSIIGIAHSLGLKVVAEGIEERDQLAILLSQECDE 800 Query: 722 MQGYLIGKPQPLIDT 736 +QGYLI KP P Sbjct: 801 IQGYLIAKPMPAEQA 815 >UniRef50_Q21SZ9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=Q21SZ9_RHOFD Length = 1169 Score = 551 bits (1421), Expect = e-155, Method: Composition-based stats. Identities = 120/507 (23%), Positives = 207/507 (40%), Gaps = 28/507 (5%) Query: 254 MMWGAMRYGYKLISLLWAVVLM-----ISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFI 308 + + R+ + +W + I + + YP + + + +V ++ Sbjct: 660 RLLQSGRHDKAFYAAMWESIRRTGSWQGEIWNRRKNGEAYPELLSITAVKENGGIVTHYV 719 Query: 309 VNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL--------RDAPWSALCYLR 360 +M + TR++A I+ LA+ D LPN R L L R AL + Sbjct: 720 GTFMDI--TRRKAAEDEIRNLAFFDLQTGLPNRRLLLDRLQQALAASARHRRQGALLLID 777 Query: 361 IPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESH--QERI 418 + + L G Q+++ L+ + G V +L G++ + L S + Sbjct: 778 LDNFKTLNDTLGHDKGDLLLQQVAQRLASCVHEGGTVARLGGDEFVVMLENLSEHLEAAA 837 Query: 419 TALDSHLKQF------RFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVT 472 T ++ K+ + DG Q + LL + + Sbjct: 838 TQAETLAKRILASLKQTYSLDGYEYQSTASIGITLFSEQQETTEDLLKRADLA--MYQAK 895 Query: 473 NAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDV-YHEILLRM 531 N R +Q + + A+ L++A+ + F L Q +G + E LLR Sbjct: 896 AVGRNTLRFFDPEMQAVVTSRAALEAGLRRAVTSDEFLLYYQAQVDGQGHLTGCEALLRW 955 Query: 532 KGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAEN--RAKMPAHRFAINLSPTS 589 + L++P F+ +A + GL + WV++ +A+ R +M A+N+S Sbjct: 956 QHPERGLVAPGEFIALAEDTGLILPLGRWVLDAACTQLAQWATRPEMAHLTVAVNVSVRQ 1015 Query: 590 VCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFG 649 QA F +V +L +L E+TES + +V+ + L+E G ++DDFG Sbjct: 1016 FHQADFVNQVLTVLDSTGTNPQRLKLELTESLLIGDVEDVIAKMSILKEKGVGFSLDDFG 1075 Query: 650 TGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEE 709 TGY+S + LK + D LKID F+RNI+ + D I + L + V+AE VE E Sbjct: 1076 TGYSSLSYLKRLPLDQLKIDQGFVRNILIDPNDAAIARMVIALGDSLGLAVIAEGVEIEA 1135 Query: 710 IREAVLSLGIDYMQGYLIGKPQPLIDT 736 R+ + LG QGYL +P PL Sbjct: 1136 QRDFLARLGCHACQGYLFCRPLPLDQF 1162 >UniRef50_B7V0E6 Motility regulator n=25 Tax=Pseudomonas RepID=B7V0E6_PSEA8 Length = 1415 Score = 550 bits (1419), Expect = e-155, Method: Composition-based stats. Identities = 121/492 (24%), Positives = 216/492 (43%), Gaps = 22/492 (4%) Query: 263 YKLISLLWAVVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAV 322 + L SL + I + +YP + + + SF+ + + + ++A Sbjct: 913 HVLASLQHSGSWEGEILQKRKTGELYPSWVGITAVRDEEGDLVSFVCFFSDI--SERKAS 970 Query: 323 VRRIQRLAYVDPVVHLPNVR--------ALNRALRDAPWSALCYLRIPGMEMLVKNYGIM 374 RRI RLAY D + HLPN AL +A R+ W L +L + + + + G Sbjct: 971 ERRIHRLAYYDALTHLPNRTLFQDRLHTALQQAERNGQWVVLMFLDLDRFKPINDSLGHA 1030 Query: 375 LRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLKQF------ 428 + Q+++ LS + + V ++ G++ L L ++ +E + + Sbjct: 1031 AGDRMLQEVATRLSACVSQDDTVARMGGDEFTLLLPSQGDREIALKRAIQVAELILGRLA 1090 Query: 429 -RFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQ 487 F +G + + LL+ +T + +N + + Sbjct: 1091 RPFTLEGREFFVTASIGVALSPQDGAELSLLMKNADTA--MYHAKEMGKNNFQFYQAEMN 1148 Query: 488 RELKDKVAMMNRLQQALEHNHFFLMAQPIT--GMRGDVYHEILLRMKGENDELISPDSFL 545 +++ + + L++ALE F L QP R E LLR + L+ P F+ Sbjct: 1149 ARALERLELESDLRRALELGEFVLHYQPQFTGDGRRLTGAEALLRWQHPRRGLVPPSEFI 1208 Query: 546 PVAHEFGLSSSIDMWVIEHTLQFM-AENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLA 604 PV E GL + + W++ + + + ++AK+ + ++NLS + ++ +L Sbjct: 1209 PVLEEIGLVAQVGDWLLAEACKQLRSWHKAKVRVPKVSVNLSARQFADGQLGERIAAILY 1268 Query: 605 KYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNAD 664 + I L E+TES +++V +A L L+ LG IA+DDFGTGY+S LK D Sbjct: 1269 ETGIPPACLELELTESILMSDVAEAMQILSGLKRLGLAIAVDDFGTGYSSLNYLKQFPID 1328 Query: 665 LLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQG 724 +LKID SF+ + D QI +I +A ++V+AE VE++ + + G D +QG Sbjct: 1329 VLKIDRSFVDGLPHGEQDAQIARAIIAMAHSLNLMVIAEGVESQAQLDFLREHGCDEVQG 1388 Query: 725 YLIGKPQPLIDT 736 YL G+P P Sbjct: 1389 YLFGRPMPAEQF 1400 >UniRef50_Q39R25 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Bacteria RepID=Q39R25_GEOMG Length = 905 Score = 550 bits (1419), Expect = e-155, Method: Composition-based stats. Identities = 103/476 (21%), Positives = 190/476 (39%), Gaps = 23/476 (4%) Query: 278 IHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVH 337 + +Y+ + + +V ++I + T R ++ A DP+ Sbjct: 410 LRNYRKDGSPFWNELFIAPVRDRDGVVTNYIGVMNDI--TEHRRYEEQLVYQATHDPLTG 467 Query: 338 LPNVRALNRAL---------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLS 388 LPN L L R + +L + + + G + + +++ L Sbjct: 468 LPNRNLLQDRLGQALALEAFRRRNPICVMFLDLDNFKKVNDTLGHTVGDMLLKAVANRLK 527 Query: 389 PLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHL-----KQFRFFWDGMPMQPQIGV 443 L G+ V +L G++ + L + + + + + + IG+ Sbjct: 528 NCLRGGDTVARLGGDEYIIVLPNVREVPDVITVAKKMINVFAAPLLLMGNEIYVTASIGI 587 Query: 444 SYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQA 503 + L N A + +N + + + + +++++ L +A Sbjct: 588 ALFPTDGETVDALL----KNADAAMYHAKEQGKNNYQFYSAEMNIRVFERLSLETSLHRA 643 Query: 504 LEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWV 561 +++ F L QP +R E L+R L+SP F+P+A E GL + WV Sbjct: 644 VKNQEFLLHYQPRVDLRNGRICGVEALVRWNHPEMGLVSPAKFIPLAEETGLIVPMGEWV 703 Query: 562 IEHTLQF-MAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTES 620 + A A +P R A+NLS Q V ++L + + L E+TES Sbjct: 704 LRTACAQNKAWQDAGLPPLRMAVNLSARQFRQENLIAMVEEILMETGLAPQWLELELTES 763 Query: 621 NALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNS 680 + +++ L+ L + G ++AIDDFGTGY+S + LK LKID +FIR++ + Sbjct: 764 LVMQEAEKSAAILRELTDRGIEVAIDDFGTGYSSLSYLKRFPIANLKIDQAFIRDMTRDP 823 Query: 681 LDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDT 736 D +V +I +A M +AE VE E + + + MQGY +P + Sbjct: 824 DDATLVKTIITMAHGLGMKTIAEGVELAEQIDFLCRHQCEEMQGYYFSRPITAEEL 879 >UniRef50_Q478F7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q478F7_DECAR Length = 739 Score = 550 bits (1419), Expect = e-155, Method: Composition-based stats. Identities = 120/513 (23%), Positives = 217/513 (42%), Gaps = 33/513 (6%) Query: 255 MWGAMRYGYKLISLLWAVVLMIS-----IHSYQNYIPIYPGYTTQLTITSSSYLVFSFIV 309 M + R + +W + I + + I+P + T + V ++ Sbjct: 213 MLKSGRQDADFYAAMWCSLGQCGHWQGEIWNRRKNGEIFPEWLTISGVRDGRGKVTHYVS 272 Query: 310 NYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL--------RDAPWSALCYLRI 361 + + + + I LA+ DP+ +PN R L L R + AL + I Sbjct: 273 TFSDI--SNLKVAESEIHHLAFYDPLTAMPNRRLLLNRLDQACVSAKRSGQFGALLIIDI 330 Query: 362 PGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITAL 421 + L G + +++ LS + G+ + G++ + L ++ A+ Sbjct: 331 DHFKTLNDTLGHDVGDHLLVEVARRLSACIREGDTAARQGGDEFVVMLEELGSEQEGAAV 390 Query: 422 DSHLKQFRFFWD-----------GMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSI 470 + + + + IG+S + + I +LL + + L Sbjct: 391 QAEIVAEKIRLELARPYLLNGDTEYFRSASIGISLFFGQE--KTIDILLKQADIA--LYK 446 Query: 471 VTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITG-MRGDVYHEILL 529 +A N R +Q L ++ + L++AL + F L QP +R + E LL Sbjct: 447 AKDAGRNAIRFFDTAMQTTLDERAELEAGLRRALVRDEFVLYVQPQVDAVRRLIGAEALL 506 Query: 530 RMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRA--KMPAHRFAINLSP 587 R + +++P+ F+P+A E GL I +WV++ + + + ++N+S Sbjct: 507 RWQPPGRAMVAPNDFIPLAEETGLIVPIGIWVLDQACAELRRWADDPRSASLFLSVNVSA 566 Query: 588 TSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDD 647 QA F +V+ LA++ L E+TES L NV++ +Q L+ +G + ++DD Sbjct: 567 RQFRQADFVAQVADALARHGANPRLLKLELTESLLLDNVEEVIEKMQALRTIGVRFSLDD 626 Query: 648 FGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVEN 707 FGTGYAS + LK + LK+D SFIR+I N D IV +I + ++ VVAE VE+ Sbjct: 627 FGTGYASLSYLKRFPFEQLKVDRSFIRDININPDDAAIVRAIIAMGNTLRLSVVAEGVED 686 Query: 708 EEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEI 740 + ++ QGYL G+P D + Sbjct: 687 DLQHAYLVKHECSLFQGYLFGRPMSFDDFRASL 719 >UniRef50_A1K5K2 Conserved hypothetical signaling protein n=2 Tax=Proteobacteria RepID=A1K5K2_AZOSB Length = 1089 Score = 550 bits (1419), Expect = e-155, Method: Composition-based stats. Identities = 113/477 (23%), Positives = 208/477 (43%), Gaps = 18/477 (3%) Query: 274 LMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVD 333 +++ +Y + + +I + V FI + V T + +++ A D Sbjct: 601 ARVTLRTYHKDGQLLWNEISLASIRDAQGEVSHFIAIFNDV--TERVRYEAELEQQATHD 658 Query: 334 PVVHLPNVRALN--------RALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSH 385 + L N LN RA RD A+ L + +++ + G Q+ + Sbjct: 659 ALTGLANRNLLNDRMQRAIIRAARDGHAVAVMLLDLDRFKLINDSLGHAAGDALLQETAR 718 Query: 386 WLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLKQ---FRFFWDGMPMQPQIG 442 LS + G+ V +L G++ + ++ S ++ AL + + + +G + Sbjct: 719 RLSASVRRGDTVARLGGDEFMVVMSDMSAEDAAAALAAKVLESLAEPMLLNGREIVATGS 778 Query: 443 VSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQ 502 + LL + + N + A + + +++ + N L++ Sbjct: 779 IGVSLYPRDGEAAATLLKHADVA--MYRAKELGRNRFQFYAPEMNERILERLELENSLRR 836 Query: 503 ALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMW 560 ALE++ L QP +R + E L+R + ++SP F+P+A E GL I W Sbjct: 837 ALENDELELHYQPKVSLRDGRVIGAEALIRWRHPQLGMVSPADFIPLAEETGLIVPIGEW 896 Query: 561 VIEHTLQFMAEN-RAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTE 619 V++H + + A +P A+N+S + +++ LA +++ QL EVTE Sbjct: 897 VVDHACRQLRAWLDAGLPQISVAVNVSARQFQHEQLTHVLARALAAHRLPPGQLHVEVTE 956 Query: 620 SNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSN 679 S + ++ TL+ L+ +G +I++DDFGTGY S LK D +KID F+ ++ ++ Sbjct: 957 SAVMCEPERTIFTLRELKNIGVRISLDDFGTGYCSLNYLKRFPIDSIKIDRCFVTDLATS 1016 Query: 680 SLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDT 736 + D I I LA V+AE VENE + + G D MQG+L +P P + Sbjct: 1017 AEDAAIALMIVSLAHSLNQTVIAEGVENEAQLDFLRRHGCDEMQGFLFSRPLPAAEF 1073 >UniRef50_B1Y791 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y791_LEPCP Length = 1066 Score = 550 bits (1418), Expect = e-155, Method: Composition-based stats. Identities = 126/528 (23%), Positives = 232/528 (43%), Gaps = 33/528 (6%) Query: 242 STNYTLS--LLLPLMMWGAMRYGYKLISLLWAVVLMIS-----IHSYQNYIPIYPGYTTQ 294 T Y+ + + + + + R+ + LW +L + + + +Y + + Sbjct: 535 ITGYSETEAVGMSPRLLQSGRHEPAFFTRLWNQLLTHGRWQGEVQNRRKNGELYTQWMSV 594 Query: 295 LTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNV--------RALNR 346 T+ ++ + + T Q+ +R+Q LA+ DP+ LPN A+ Sbjct: 595 STVRDEHDQPTHYVSVFTDI--TPQKEAEQRLQHLAHFDPLTQLPNRLMVLSRLEHAIAS 652 Query: 347 ALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLA 406 A R A+ ++ + + + + G + ++ L + + +L G++ Sbjct: 653 AARAERRVAVLFIDLDNFKTVNDSLGHSAGDDLLRAVADRLGTRTRREDTLGRLGGDEFI 712 Query: 407 LRLNTESHQERITALDSHL-----KQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGE 461 L L + + L FR + +Q IG+S L +GE Sbjct: 713 LMLEHLREPQDAAQVAQELIGLLETPFRVAGQEVYVQASIGISLYPDDG------LEVGE 766 Query: 462 LNTVAELSIV--TNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGM 519 L A+ ++ A + R L + ++A+ RL++ALE+ F L QP+ + Sbjct: 767 LVRDADAAMYQAKRAGRGVYRFYTESLTTAAQSRLALDTRLRRALENKEFVLWYQPLYRL 826 Query: 520 RGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQF-MAENRAKM 576 + E L+R+ I P F+P+ E G +++ WV + + A + Sbjct: 827 ADRCLIGLEALVRLNQPGLPPIGPAEFIPLLEETGQITTLGAWVTQEACRQGRAWLDEGL 886 Query: 577 PAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHL 636 R AINLSP + + + V + L + + A +L E+TES + ++A+ L L Sbjct: 887 DFGRIAINLSPQEIRRGQTDERVREALERSGLPAERLELELTESGLMEQGERAEAFLHRL 946 Query: 637 QELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMK 696 + LG ++AIDDFGTGY+S A LK LKID SF+R++ +++ D Q+V ++ + R Sbjct: 947 RALGVRLAIDDFGTGYSSLAYLKRFPVSKLKIDRSFVRDLPADANDAQLVQTMVSMGRNL 1006 Query: 697 KMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIR 744 + V+AE VE E + + SLG D QGY P+P + + + P+ Sbjct: 1007 GISVLAEGVETEAQFDYLRSLGCDAAQGYFFSPPRPADEARHWLRPLA 1054 >UniRef50_A0L9S8 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L9S8_MAGSM Length = 971 Score = 550 bits (1418), Expect = e-155, Method: Composition-based stats. Identities = 111/514 (21%), Positives = 219/514 (42%), Gaps = 29/514 (5%) Query: 255 MWGAMRYGYKLISLLWAVVLM-----ISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIV 309 + + R+ + +W + I + + YP + + T+T+ ++ Sbjct: 457 LLQSGRHDAPFYTQMWHALQQDGAWEGEIWNRRKSGETYPEWLSIATVTNDKGETVQYVA 516 Query: 310 NYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL--------RDAPWSALCYLRI 361 + + T+++ I A D + LPN + L R AL ++ + Sbjct: 517 AFSDI--TKRKQAEETILHQANYDFLTDLPNRNLFHDRLQTELKRSQRSGQQVALLFIDL 574 Query: 362 PGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITAL 421 + + G + Q ++++ L + + + +L G++ + L E + L Sbjct: 575 DRFKFVNDTLGHNVGDQLLREVAIRLGHCVRESDTIARLGGDEFTVILPELHGPEGVARL 634 Query: 422 DSHL---KQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENM 478 + + R+ + + ++ + +L A++++ A EN Sbjct: 635 AQGMIDKLEERYCIQDHELFISASIGITIYPEDADN----MMDLVKNADVAMYR-AKENG 689 Query: 479 QRRGAMY---LQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDV--YHEILLRMKG 533 + Y + + + + L+ ALE F++ QP + E L+R + Sbjct: 690 RGSFCFYTAEMNADARQLHKIEQALRVALEEGQFWIHYQPYVQQSSGLITGVEALIRWRN 749 Query: 534 ENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAEN-RAKMPAHRFAINLSPTSVCQ 592 E++ PD F+PVA E GL I +WV+ + +A+ R P F++N+S + Sbjct: 750 SAGEIVYPDQFIPVAEETGLIVPIGLWVLRSVIGVIAQWQREGHPDITFSVNVSARQFQE 809 Query: 593 ARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGY 652 ++ L + QI L+ E+TES + + + L+ ++ LG ++A+DDFGTGY Sbjct: 810 GHLVGQIKAALQENQINPQSLMLEITESLMIRDPEHTLNMLKEIKALGVRVALDDFGTGY 869 Query: 653 ASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIRE 712 +S LK DLLKID SFI I ++ D +V++I +A + V+ E +EN++ + Sbjct: 870 SSLGYLKQFPIDLLKIDRSFINGIANSQDDETMVSAIVSMAHSLGVGVIGEGIENDQQLQ 929 Query: 713 AVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIRES 746 V DY+QG+ +P P + E ++S Sbjct: 930 RVNLHACDYVQGFFYSRPMPYDELALFFEGYQKS 963 >UniRef50_Q1GXZ6 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC and GAF sensor(S) n=2 Tax=Proteobacteria RepID=Q1GXZ6_METFK Length = 1238 Score = 550 bits (1418), Expect = e-155, Method: Composition-based stats. Identities = 127/487 (26%), Positives = 210/487 (43%), Gaps = 31/487 (6%) Query: 277 SIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVV 336 ++ +N I+ L I +S+ + ++ + T ++A RIQ LA+ D + Sbjct: 755 LVNYRKNGEEIWLE-MDILPIANSAGVFTHWVSVQRDI--TERKAAESRIQHLAFYDMLT 811 Query: 337 HLPNVRALNRALRDA--------PWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLS 388 +LPN L L A AL +L + + L +G ++++ L Sbjct: 812 NLPNRLLLLDRLEQALLNSMRLKRSGALLFLDLDNFKTLNDTHGHDFGDMLLEQVAQRLL 871 Query: 389 PLLEPGEDVYQLSGNDLALRLNTESHQ------ERITALDSHL----KQFRFFWDGMPMQ 438 + + V +L G++ + + S Q E D L + FR Sbjct: 872 NSVRITDTVARLGGDEFVVVVENLSEQGCNAAQEASLVADKILLALSQPFRLSGYEHYSS 931 Query: 439 PQIGVSYCYVRSPVNHIYLLLGELNTVAELSIV--TNAPENMQRRGAMYLQRELKDKVAM 496 IGV+ N + + EL A+L++ A N R +Q + + AM Sbjct: 932 CSIGVALFC-----NEQQVTVDELLKRADLAMYEAKAAGRNTFRFFDPAMQALITKRAAM 986 Query: 497 MNRLQQALEHNHFFLMAQPITGMRGDV-YHEILLRMKGENDELISPDSFLPVAHEFGLSS 555 L+QAL + L QP +G + E L+R + L+SP +F+ +A E GL Sbjct: 987 EEDLRQALRRDEMRLYYQPQVDSQGSLLGAEALVRWEHPQQGLLSPAAFIELAEETGLIL 1046 Query: 556 SIDMWVIEHTLQFMAEN--RAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQL 613 I WV+ + R + ++N+S + Q F V +L + L Sbjct: 1047 PIGEWVLRTACMQLVAWAGRPETAGLVLSVNVSARQLHQHDFIDRVFSILKETGANPQSL 1106 Query: 614 IFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFI 673 E+TES + N+++ + L+ +G ++DDFGTGY+S A LK + LKID SF+ Sbjct: 1107 KLELTESTLVENIEEMITKMNILKAMGVGFSMDDFGTGYSSLAYLKRLPLSQLKIDRSFV 1166 Query: 674 RNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPL 733 R+++ +S D IV +I L + VVAE VE+ E ++ + G QGYL G+PQP Sbjct: 1167 RDVLVDSNDASIVQTIIALGHGLGIEVVAEGVESWEQQQFLEKHGCLEYQGYLFGRPQPA 1226 Query: 734 IDTLNEI 740 E Sbjct: 1227 EQLEREF 1233 >UniRef50_Q2YCL1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=2 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2YCL1_NITMU Length = 1054 Score = 549 bits (1416), Expect = e-154, Method: Composition-based stats. Identities = 114/478 (23%), Positives = 202/478 (42%), Gaps = 31/478 (6%) Query: 293 TQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL---- 348 + + + + T++++ I LA D + LPN R L L Sbjct: 584 HWTLVRNDDGEPQAIFAINTDI--TQRKSAENEILHLALYDSLTGLPNRRLLLDRLGHAL 641 Query: 349 ----RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGND 404 R+ AL ++ + ++L G + ++++ LS + + V +L G++ Sbjct: 642 AVSARNQRMGALLFIDLDNFKLLNDTLGHDMGDLLLRQVAPRLSSCVRESDTVARLGGDE 701 Query: 405 LALRLNT---ESHQERITALDSH--------LKQFRFFWDGMPMQPQIGVSYCYVRSPVN 453 + L E H E +T + + ++ F + P IG++ N Sbjct: 702 FVVILMGDFGEDHDEALTQISTICERIRSAFIQPFNLDPYIHHITPSIGIALF------N 755 Query: 454 HIYLLLGELNTVAELSIVTNA--PENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFL 511 EL A+L++ N R +Q + + + + L ++ E N F L Sbjct: 756 DQSQTTNELLKRADLAMYQAKASGRNAMRFFDPDMQAAMNARAILESELYKSWERNEFIL 815 Query: 512 MAQPITGMRGDVYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAE 571 Q RG + E L+R + L+ P F+P A E GL + WV+E +A Sbjct: 816 HYQLQVDSRGIIGAEALVRWQHPRRGLLPPSEFIPQAEETGLILPLGEWVLETACNQLAS 875 Query: 572 NRAKMPAHRF--AINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQA 629 + + ++N+S CQ F +V +L + +L E+TES + ++ Sbjct: 876 WALQPETVQLNLSVNVSSLQFCQPDFVEQVISILDRTGANPQRLKLELTESILVHDMDDT 935 Query: 630 QITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASI 689 + L+ G A+DDFG GY+S LK + D +KID SF+R++++++ D IV +I Sbjct: 936 IAKMMTLKARGVGFALDDFGIGYSSLYYLKRLPLDWVKIDRSFVRDVLTDNNDATIVRTI 995 Query: 690 CHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIRESA 747 LA+ + V+AE VE ++ + S G QGYL +P PL ++P A Sbjct: 996 LLLAKSMGLAVIAEGVETGAQKDFLASHGCTAYQGYLFSRPLPLEQFERFVQPAAGGA 1053 >UniRef50_C9P6X4 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Vibrio metschnikovii CIP 69.14 RepID=C9P6X4_VIBME Length = 919 Score = 549 bits (1416), Expect = e-154, Method: Composition-based stats. Identities = 123/504 (24%), Positives = 215/504 (42%), Gaps = 29/504 (5%) Query: 258 AMRYGYKLISLL-----WAVVLMISIHSYQNYIPIYPGYTTQLTITSS-SYLVFSFIVNY 311 + R+ L I + + Y +T + S + ++++ Sbjct: 405 SGRHNQSFYDELELQLKTQGSWQGEIFNKRKNGEEYLQWTMITAVISDHEDEIINYVITL 464 Query: 312 MAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL--------RDAPWSALCYLRIPG 363 + + T+++A +I++LA+ D + LPN + L L R+ + A+ YL + Sbjct: 465 IDI--TQRKAAESKIKQLAFYDQLTGLPNRQLLMERLESARLNSQRNGQYGAILYLDLDD 522 Query: 364 MEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDS 423 + L G ++ +S L + + V ++ G++ + L I + + Sbjct: 523 FKTLNDTRGHDTGDKFLTLVSQRLLDCVRRTDTVARIGGDEFVIILEQLDSDLDIASKRA 582 Query: 424 HLK--------QFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAP 475 L ++ D + + + I LL + + A Sbjct: 583 DLLCRKILDTLSKPYYIDNIEHFSTLSIGVTLFLGETKGIDELLKHADLA--MYQAKGAG 640 Query: 476 ENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDV-YHEILLRMKGE 534 N R +Q ++ + AM N ++ AL N F L QP G + E L+R + Sbjct: 641 RNTHRFFNPEMQAKVLEHAAMANDIRHALTRNEFTLYYQPQVTHDGQLTGAEALIRWQHP 700 Query: 535 NDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAK--MPAHRFAINLSPTSVCQ 592 ISP F+P+A E GL + WV++ Q +A + + AIN+S Q Sbjct: 701 KQGTISPIEFIPIAEETGLILPLGEWVLDQACQVLAVWQNSPLTDSLVLAINISAKQFHQ 760 Query: 593 ARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGY 652 F +V + L +Y+ +L E+TES +++ + L++ G ++DDFGTGY Sbjct: 761 TGFVQQVLEALQRYRANPDRLKLELTESMLHEDLEDTITKMSQLKKYGVSFSLDDFGTGY 820 Query: 653 ASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIRE 712 +S LK + D LKID SF+R++++NS D I +I LA+ + V+AE VE +E R Sbjct: 821 SSLNYLKRLPLDQLKIDKSFVRDLLTNSHDADIARTIVSLAKSMNLAVIAEGVETQEQRL 880 Query: 713 AVLSLGIDYMQGYLIGKPQPLIDT 736 A+ S G QGYL +P PL Sbjct: 881 ALASYGCLDFQGYLFSRPVPLEAF 904 >UniRef50_Q2BR92 Putative uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BR92_9GAMM Length = 944 Score = 549 bits (1416), Expect = e-154, Method: Composition-based stats. Identities = 119/502 (23%), Positives = 218/502 (43%), Gaps = 28/502 (5%) Query: 258 AMRYGYKLISLLWAVVL-----MISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYM 312 + R+ +W ++ I + + ++P + + +T S+ + ++I + Sbjct: 445 SGRHDETFYRSMWQMINTSGYWRGEIWNRRKNGEVFPQWLSIQAVTDSAGMARNYIASIT 504 Query: 313 AVLATRQRAVVRRIQRLAYVDPVVHLPNVRAL---------NRALRDAPWSALCYLRIPG 363 + T ++ V +++ L+ DP+ +LPN R L + AL Y+ + Sbjct: 505 DL--TERKQVEEKLRYLSDFDPLTNLPNRRLLGYRVDQTLSLSRRQPDQQFALLYIDLDH 562 Query: 364 MEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDS 423 + + + G + QK++ ++ L+ G+ V +L G++ + + E+ L Sbjct: 563 FKNINDSLGHRFGDEILQKVAKRITELVREGDTVSRLGGDEFMILMPELHKLEQAANLAE 622 Query: 424 H-LKQFRFFWDG---MPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQ 479 L + + + P +G++ L N A + N Sbjct: 623 RILHNIAQPLENDSHLMITPSVGIAVYPNDGDSFDKLLR----NADAAVHFAKRQGRNNY 678 Query: 480 RRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDE 537 + + + +++ + L++A+E+ F L QP +R E L+R + N+ Sbjct: 679 QFYTAEMNQRASERLQVEISLRKAVENQEFELFYQPQLNLRDGSLAGVEALIRWRHPNEG 738 Query: 538 LISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAK-MPAHRFAINLSPTSVCQARFP 596 L+ P+ F+P+A E GL I WV+ + AE AK ++N+S Sbjct: 739 LVPPNRFIPLAEETGLILQIGSWVLVEACRQGAEWAAKSTEPFTMSVNVSVRQFR-PELV 797 Query: 597 VEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYA 656 EV L + L+ E+TES + + ++ L L+ELG Q+++DDFGTGY+S A Sbjct: 798 EEVRSALLTSGLSPKSLVIEITESTLMQDEEKTLTLLHELKELGVQLSLDDFGTGYSSMA 857 Query: 657 RLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLS 716 LK N D LKID +FI ++ N D I ++I +A ++ VAE +E E E + S Sbjct: 858 YLKRFNLDQLKIDRAFISDLPQNPDDAAITSAIIDVASHFGLVTVAEGIEKPEQAEFLAS 917 Query: 717 LGIDYMQGYLIGKPQPLIDTLN 738 +G QGY KP P D Sbjct: 918 VGCIEGQGYYYEKPIPANDLTE 939 >UniRef50_A0L2H7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=12 Tax=Bacteria RepID=A0L2H7_SHESA Length = 1228 Score = 548 bits (1414), Expect = e-154, Method: Composition-based stats. Identities = 113/478 (23%), Positives = 208/478 (43%), Gaps = 19/478 (3%) Query: 278 IHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVH 337 + +P + + + + +I ++ + + ++ RI LA+ D + Sbjct: 753 VWDRHKEGFDFPKWLMMSIVRDETGAISHYIGSFTDI--SERKVNEERIHFLAHHDSLTL 810 Query: 338 LPNVRALNRALR--------DAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSP 389 LPN +L L A+ ++ + + + G + +++ L Sbjct: 811 LPNRLSLQSRLEKVFQEAFISQTQIAVMFIDMDHFKNINDTLGHHVGDMLLLEVARRLKN 870 Query: 390 LLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLK---QFRFFWDGMPMQPQIGVSYC 446 ++ + V +L G++ + L+ H R+ + L+ + D P+ + Sbjct: 871 IMGNDDIVARLGGDEFVVVLSDTDHD-RVAKVAEALRSGLNQTYLIDNKPLHSSPSIGIS 929 Query: 447 YVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEH 506 + + + L+ + + A N + + + ++ + L+QA+ Sbjct: 930 LFPTDGDSVEALMKNADMA--MYRAKAAGRNNYQFFTAAMNTLVTERQQIETGLRQAIAC 987 Query: 507 NHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEH 564 N L QP + V E L+R + L++PD F+P+A E + I WV+E+ Sbjct: 988 NELLLYYQPQVDISSGQVVGVEALIRWQHPELGLVAPDRFIPIAEEIDMIIPIGQWVLEN 1047 Query: 565 TLQFMAENRAKM-PAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNAL 623 L +AE R K R A+NLS + + ++ +L K+++ L E+TES A+ Sbjct: 1048 ALAQLAEWRDKGAKGLRMAVNLSAHQLRKDTIVADIINVLTKHKLGKGALELEITESVAM 1107 Query: 624 TNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDY 683 +Q L L++ G ++AIDDFGTGY+S + LK + D LK+D SF+++I S+ D Sbjct: 1108 QYPEQNAKLLAELRQHGIELAIDDFGTGYSSLSYLKLLPLDRLKLDRSFVKDIESDPNDA 1167 Query: 684 QIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIE 741 I A+ +A + VVAE VENE + +G D +QGY KP D IE Sbjct: 1168 AISAATISMAHELGLTVVAEGVENEAQLVLLSGMGCDLVQGYYFSKPLAADDCFRFIE 1225 >UniRef50_B9LZ98 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. FRC-32 RepID=B9LZ98_GEOSF Length = 912 Score = 547 bits (1411), Expect = e-154, Method: Composition-based stats. Identities = 113/481 (23%), Positives = 207/481 (43%), Gaps = 23/481 (4%) Query: 275 MISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDP 334 ++ H + +P+ TT TI + + + T ++ IQ+LAY D Sbjct: 434 IMLAHRNGSCVPV--EVTTARTIWQGKQVELAIV-----RDITDRKKAEDEIQQLAYYDT 486 Query: 335 VVHLPNVRALNRAL--------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHW 386 + LPN L L RD A+ +L + + + G + ++ Sbjct: 487 LTGLPNRSLLQDRLGQGIVQAVRDNRKVAIMFLDLDRFKSINDTLGHVAGDSLLATVAER 546 Query: 387 LSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLKQF---RFFWDGMPMQPQIGV 443 L+ + + V ++ G++ + ++ H E + + + + + + Sbjct: 547 LTECVRETDTVARIGGDEFVIIISAIEHAEDLNKIAEKILAAISKPLVLNDQEIFITASI 606 Query: 444 SYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQA 503 + LL + + + +N + + + + + + + N L++A Sbjct: 607 GIAIYPEDGTDVQGLLKNADLA--MYKAKDQGKNAFQYFSREMNVQALEHLILENSLRRA 664 Query: 504 LEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWV 561 LE N F + QP ++ V E L+R + + L+ P F+P+A E GL I W Sbjct: 665 LERNEFVIFYQPQMDLKSGRLVGMEALIRWQHPDLGLLPPSRFIPMAEETGLILPIGEWA 724 Query: 562 IEHTL-QFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTES 620 ++ + A A R A+NL Q +F + +L K + QL E+TES Sbjct: 725 LQTACAKNRAWMDAGFMPLRVAVNLCGIQFRQKKFIELIEAVLKKTGLAPSQLELELTES 784 Query: 621 NALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNS 680 ++ +++ L L+E+G +AIDDFGTGY+S + LKN + +KID SFIR++ +N Sbjct: 785 MLMSKAEESTTVLHKLKEMGVSLAIDDFGTGYSSLSYLKNFPINRVKIDRSFIRDVPNNP 844 Query: 681 LDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEI 740 D IV++I +A + V AE VEN E + + + +QGYL+ P P + + Sbjct: 845 DDTAIVSAIIAMAHNLNLKVTAEGVENHSQLEFLSTRNCNEIQGYLLSSPLPEAEFTRFL 904 Query: 741 E 741 Sbjct: 905 R 905 >UniRef50_Q7P0M4 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7P0M4_CHRVO Length = 633 Score = 547 bits (1410), Expect = e-154, Method: Composition-based stats. Identities = 118/506 (23%), Positives = 219/506 (43%), Gaps = 23/506 (4%) Query: 260 RYGYKLISLLWAVVLM-----ISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAV 314 R+ +W + I + + +P + + + F+ + + Sbjct: 127 RHEPAFFQQMWQTLQQRGQWSGEIWNRRKSGEHFPCWVNISVLQDGQGEISHFVALFTDI 186 Query: 315 LATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRDA--------PWSALCYLRIPGMEM 366 + ++ R+Q +A D + LPN +N L A A+ ++ + + Sbjct: 187 --SERKEQEARVQHMAEYDALTDLPNRVLVNDRLHQAIRQAELQHNQLAVLFVDLDHFKN 244 Query: 367 LVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLK 426 + G + ++++ L+ + + V + G++ L L + + + + Sbjct: 245 INDTLGHCAGDELLKEVARRLAGAVRGLDTVGRTGGDEFVLILPSINQPGEAAQIAERIL 304 Query: 427 ---QFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGA 483 Q F + + + + I LL +N + N R Sbjct: 305 RTIQQPFQIGEHSLVVGCSIGISLMPDDGSDIQTLL--MNADLAMYHAKAHGRNTFRFYT 362 Query: 484 MYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISP 541 + ++ +++ M NRL++A+E +L+ QP M G + E LLR + ++ LI P Sbjct: 363 REMNTQVAERLLMENRLRRAMEQEQLYLVYQPQYDMAGQRLLGCEALLRWRDPDEGLIMP 422 Query: 542 DSFLPVAHEFGLSSSIDMWVIEHTLQFMA-ENRAKMPAHRFAINLSPTSVCQARFPVEVS 600 F+PVA + GL + WV++ + + RA + R A+N+S + + F +V Sbjct: 423 GRFIPVAEDTGLIVPLGRWVLDQACRQASLWLRAGLEPMRVAVNVSAHQLMRHDFIDDVR 482 Query: 601 QLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKN 660 + L ++ + L EVTES + + A L ++ +G ++AIDDFGTGY+S A LK Sbjct: 483 EALQRHALPGHCLELEVTESTLMADADLASRQLAVIKAMGVRLAIDDFGTGYSSLAYLKR 542 Query: 661 VNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGID 720 DL+KID SFI ++ + + IV++I HLA M +AE VENE + + +LG + Sbjct: 543 FAPDLVKIDRSFISDLPGDEENAAIVSAIVHLAGALGMETLAEGVENENQQRFLQTLGCE 602 Query: 721 YMQGYLIGKPQPLIDTLNEIEPIRES 746 MQGYL+G P +E + Sbjct: 603 AMQGYLLGSPLAEEMMTRRLEQQQRR 628 >UniRef50_B3E661 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=cellular organisms RepID=B3E661_GEOLS Length = 1027 Score = 547 bits (1410), Expect = e-154, Method: Composition-based stats. Identities = 121/490 (24%), Positives = 203/490 (41%), Gaps = 26/490 (5%) Query: 255 MWGAMRYGYKLISLLWAVVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAV 314 +W + G + L + + +Y T+ + + S + FI N + Sbjct: 535 LWKTILSGREWRGELL---------NRRKNGEVYWSITSISPLRNDSGEITHFIANVEDI 585 Query: 315 LATRQRAVVRRIQRLAYVDPVVHLPNVR--------ALNRALRDAPWSALCYLRIPGMEM 366 ++ I+ LAY DP+ LPN R AL R+ R AL YL + + Sbjct: 586 --NERKNAEATIEHLAYFDPLTDLPNRRMLQDRLELALRRSRRHGSNVALMYLDLDSFKH 643 Query: 367 LVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLK 426 + + G ++++ S ++ + V +L G++ AL L+ + + + L Sbjct: 644 VNDSMGHPAGDLLLKEMAGRFSGVVRDDDVVCRLGGDEFALILHDIHQDQDVVPIAQKLI 703 Query: 427 QF---RFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGA 483 + DG + + + L + L +N R Sbjct: 704 EAVAQPVPLDGREVVVTASIGIALFPRDGGDVKNLEKHADIA--LYHAKEEGKNTFRFYL 761 Query: 484 MYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISP 541 L + ++A+ L+ A E L QP + E LLR + L+SP Sbjct: 762 EELNSTISTRIALEQGLRYAKERQELELHYQPKVCVASGKVSGVEALLRWHSPDFGLVSP 821 Query: 542 DSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQ 601 F+P+A + L I WV+ + R + A+NLS + V+ Sbjct: 822 IRFIPLAEQTRLIIPIGEWVLRTACLQQVQWREQGLLLNMAVNLSAIQLKSPGLVERVAA 881 Query: 602 LLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNV 661 ++ + I+ L E+TES + N + L+ L+ LGC I+IDDFGTGY+S + LK+ Sbjct: 882 IIDETGIQPEHLELELTESALVNNPDEVVQLLERLRTLGCSISIDDFGTGYSSLSYLKSF 941 Query: 662 NADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDY 721 +LKID SF+R++ NS D I S+ LA M VAE VE+EE + +G Y Sbjct: 942 PVTILKIDRSFVRDLAHNSGDRAIARSVVDLANNLDMKTVAEGVESEEQLTILQQIGCTY 1001 Query: 722 MQGYLIGKPQ 731 +QG++ +P Sbjct: 1002 IQGFIYSRPV 1011 >UniRef50_A1RPJ9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=16 Tax=Proteobacteria RepID=A1RPJ9_SHESW Length = 1511 Score = 547 bits (1409), Expect = e-154, Method: Composition-based stats. Identities = 116/464 (25%), Positives = 191/464 (41%), Gaps = 19/464 (4%) Query: 291 YTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL-- 348 + + F+ + + T ++ + ++ LA D + LPN L Sbjct: 1044 WLEINQVIDIKGETSHFVAVFTDI--TERKKAEQDLRFLASFDTLTGLPNRTLFQDRLNH 1101 Query: 349 ------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSG 402 R AL +L + + + + G + + + L + G+ V +L G Sbjct: 1102 AITQAHRANNIVALLFLDLDRFKHINDSMGHHVGDLLLKAAAKRLQNAVREGDTVARLGG 1161 Query: 403 NDLALRLNTESHQERITALDSHLK---QFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLL 459 ++ + L + + T + + Q F + + + + ++ L+ Sbjct: 1162 DEFTIILEGVAKTKAATLISEKVLRAFQTPFLLEDKSLTISTSIGISLYPNDADNADSLI 1221 Query: 460 GELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGM 519 +T + + N + L V + L+QA+ N L+ QP + Sbjct: 1222 KFADTA--MYHAKSLGRNNFQFYTHKLNEIATRHVLLEAGLKQAIHRNELSLVYQPKFSL 1279 Query: 520 RGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRA-KM 576 R E LLR ISP F+P+A E G+ + I WVI H Q +AE A Sbjct: 1280 RDGSLTGLEALLRWHHTELGPISPVEFIPLAEETGIINQIGHWVINHACQQLAEWNALGF 1339 Query: 577 PAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHL 636 A+NLS + A + LA + A L E+TES + N + + L L Sbjct: 1340 NNISMAVNLSARQLK-ADIISTIEVALAVSGLPAQSLELELTESMIMGNPQDSVSILSKL 1398 Query: 637 QELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMK 696 + LG IAIDDFGTGY+S + LK D LKID F+R+I ++ D I ++I LA Sbjct: 1399 KALGLTIAIDDFGTGYSSLSYLKRFPIDTLKIDREFVRDITNDPDDAAITSAIIALAHSL 1458 Query: 697 KMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEI 740 ++ VVAE VE + + G D +QG+L+ KP D L + Sbjct: 1459 ELNVVAEGVETQAQLNFLGLQGCDEVQGFLLSKPLSAKDCLTLL 1502 >UniRef50_B9Z1R5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z1R5_9NEIS Length = 1086 Score = 547 bits (1409), Expect = e-154, Method: Composition-based stats. Identities = 131/520 (25%), Positives = 229/520 (44%), Gaps = 35/520 (6%) Query: 238 STIFSTNYTLSLLLPLMMWGAMRYGYKLISLLWAVVLMISIHSYQNYIPIYPGYTTQLTI 297 S IF N + S+ M+ G R+G+ W ++ S++ YP + + Sbjct: 570 SRIFRDNTSWSVA---MLDGLARHGH------WQGEMLDRRRSHE----WYPAELSISAV 616 Query: 298 TSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRAL----NRALRD--- 350 + + +++ + + T ++ R+Q LA DP+ LPN L ++ Sbjct: 617 RDDAGAITNYVGVFADI--TVRKQAEERLQFLANHDPLTRLPNRSWLIACLEDRIQQIAS 674 Query: 351 -APWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRL 409 A+ +L + +++ ++G + ++ + L ++ + +L G++ L + Sbjct: 675 SGQQVAVMFLDLDRFKLINDSFGHQTGDELLRETASRLEQVVGGRGQIARLGGDEFTLLV 734 Query: 410 NTESHQERITALDSHL-----KQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNT 464 + + Q ++ L + + + + +G+S Y + LL N Sbjct: 735 SHFASQATLSTLAEDILAVLAQPLWLEGQELIVTGSLGIS-VYPHDGSDARTLLK---NA 790 Query: 465 VAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD-- 522 + A +N + A + + +++ + L+QALE F L QPI Sbjct: 791 DVAMYRAKEAGKNTYQFFAAEMNAQAIERLQLERGLRQALERGEFELHFQPIVAAATYRL 850 Query: 523 VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRA-KMPAHRF 581 E+LLR + L+SP F+P+A E GL I WVI + +AE + R Sbjct: 851 EALEVLLRWRHPELGLVSPVRFIPLAEETGLIRPIGDWVIRQACRQLAEWDCLGLHVPRL 910 Query: 582 AINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGC 641 AINLS Q ++V+ LA+ I A +L E+TES + N +A L L+ LG Sbjct: 911 AINLSARQFEQQGLIMQVAGALAEAGIAAGRLELEMTESMVMQNPSEAVSLLGELKALGV 970 Query: 642 QIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVV 701 +++IDDFGTGY+S + LK D LKID SFI + + + I +I +AR VV Sbjct: 971 RLSIDDFGTGYSSLSYLKRFPLDTLKIDRSFIEGLPGDGDNAAIAEAILAMARKLSFSVV 1030 Query: 702 AEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIE 741 AE VE E + + G +QGYL +P P + ++ Sbjct: 1031 AEGVETEAQAAFLCAKGCQLLQGYLFSRPLPAAELPAFLQ 1070 >UniRef50_B3PKJ2 EAL domain protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PKJ2_CELJU Length = 798 Score = 547 bits (1409), Expect = e-154, Method: Composition-based stats. Identities = 118/492 (23%), Positives = 216/492 (43%), Gaps = 22/492 (4%) Query: 270 WAVVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRL 329 W L+ + + +P + + +T+S +I + + T + +I+ L Sbjct: 305 WQGELI----NQRKSGEEFPSWFSVTQVTNSRGEPEHYIAIFNDI--TEHKNSRAQIEFL 358 Query: 330 AYVDPVVHLPNVRALNRAL--------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQ 381 A+ D + LPN LN L R + ++ + + + + G + Q Q Sbjct: 359 AHHDALTGLPNRILLNDRLEMAITQVRRQGEKLGILFIDLDRFKNVNDSLGHGVGDQILQ 418 Query: 382 KLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLK---QFRFFWDGMPMQ 438 + + L+ + G+ V +L G++ + + + L L+ Q + DG+ + Sbjct: 419 EAAKRLTANVRTGDTVSRLGGDEFVVLFPRVRTEGNLADLTIKLREQLQLPYTVDGISLH 478 Query: 439 PQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMN 498 + L+ + A + + N + L + D++ + + Sbjct: 479 ITPSIGIAVYPDDGEDPNTLIKNAD--AAMYLAKEKGRNNYQFYTPTLNAKTLDRLKLES 536 Query: 499 RLQQALEHNHFFLMAQP-ITGMRGDV-YHEILLRMKGENDELISPDSFLPVAHEFGLSSS 556 L+ A++ F L QP I G G + E L+R + LISP F+P+A E GL Sbjct: 537 DLRSAIDAGDFELHYQPQIIGSSGQLWGLEALIRWRHRERGLISPAEFIPLAEETGLIVG 596 Query: 557 IDMWVIEHTLQFMAENRAKMPAH-RFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIF 615 + WV+ ++ +AE R + H ++N+S Q F V +L + Q+ + Sbjct: 597 LGDWVLVQAVKQLAEWRRQGHNHLVVSVNISALQFRQGDFLDRVKHILQEAQLVPDAIEL 656 Query: 616 EVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRN 675 E+TE+ + +V+ A TL+ L+ELG +IAIDDFGTG++S L+++ ++LKID SF+R Sbjct: 657 ELTETMLMQDVQSAIQTLKGLRELGFRIAIDDFGTGFSSLNYLRHLPINVLKIDQSFVRE 716 Query: 676 IVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLID 735 ++ IV SI LA+ +AE VE + + + G MQGY +P P + Sbjct: 717 MLQEPESLAIVESIIALAQALGKETIAEGVETRAEFDVLQARGCRLMQGYFFARPMPPVI 776 Query: 736 TLNEIEPIRESA 747 + +S Sbjct: 777 FDQWYQQQTQST 788 >UniRef50_Q1JY96 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JY96_DESAC Length = 904 Score = 547 bits (1409), Expect = e-154, Method: Composition-based stats. Identities = 114/497 (22%), Positives = 210/497 (42%), Gaps = 24/497 (4%) Query: 254 MMWGAMRYGYKLISLLWAVVLM-----ISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFI 308 ++ + + +W ++ + + + +YP + T+S+ + ++ Sbjct: 401 RIFRSDHHNSAFYQQMWQSLIEEGRWEGEVWNRRKNGEVYPLNVSISRCTNSAGIPSHYV 460 Query: 309 VNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL--------RDAPWSALCYLR 360 + + + + ++Q AY D + +LPN + + L + A+ YL Sbjct: 461 AIFHDI--SEIKRSEEKLQHQAYHDALTNLPNRKLFHDRLSVAVAHARQHKTKLAVIYLD 518 Query: 361 IPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITA 420 I + + + G + Q++S L + +L G++ + + IT Sbjct: 519 IDNFKYINDSLGHHYGDKLLQQISERLLSCTRQEDTTARLGGDEFIILMPEIEDPHDITV 578 Query: 421 LDSHLK---QFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPEN 477 L + + G + + + L+ + + A +N Sbjct: 579 LCRRILKQLELPHALSGRDYTVNVSMGVTVFPDDADTPEDLIKNADIA--MYRAKEAGKN 636 Query: 478 MQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGEN 535 + +Q+ + ++ + RL AL N F L QP + + + E L+R + + Sbjct: 637 GYQLFTAAMQQTIMQRIELEARLSDALCRNEFVLFYQPQVDLESEHVIGAEALIRWQKPD 696 Query: 536 DELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAK-MPAHRFAINLSPTSV-CQA 593 +L+ PD F+P+A E GL + ID WV++ + + R + + ++NLS Sbjct: 697 GQLVYPDEFIPIAEECGLITQIDHWVLKAACRQANKWREQSGRNFKMSVNLSSEQFAKDQ 756 Query: 594 RFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYA 653 V +L K + A L EVTE+ +++ + A + L LG IAIDDFGTGY+ Sbjct: 757 ELVQRVKNVLNKTGLPAECLTLEVTENAVMSDTESAIAIMTQLTALGVSIAIDDFGTGYS 816 Query: 654 SYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREA 713 S + +KN A LKID SF+++I +S D I ASI L R M V+AE VE + + Sbjct: 817 SLSYVKNFPARYLKIDRSFVKDIPGDSDDMAIAASIISLGRNLNMEVIAEGVEEQTQIDF 876 Query: 714 VLSLGIDYMQGYLIGKP 730 + +QGY GKP Sbjct: 877 LKQHRCQQVQGYFYGKP 893 >UniRef50_A0LKD9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LKD9_SYNFM Length = 844 Score = 547 bits (1409), Expect = e-154, Method: Composition-based stats. Identities = 121/510 (23%), Positives = 211/510 (41%), Gaps = 31/510 (6%) Query: 254 MMWGAMRYGYKLISLLWAVVL-----MISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFI 308 + + + + +WA + I + + I+P + T + +S + +++ Sbjct: 329 RLLKSGNHHEEFYRAMWATLSSTGQWQGEIWNRRKNGDIFPAWLTLCAVRNSEDKITNYV 388 Query: 309 VNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNV--------RALNRALRDAPWSALCYLR 360 + T ++ R+ A D + LPN AL RA RD A+ +L Sbjct: 389 GISRDI--TLRKEAEERLSYQASHDALTGLPNRARFHDRLTHALARAGRDRHEFAILFLD 446 Query: 361 IPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITA 420 + +++ G + Q ++ L + + + G++ + L + E Sbjct: 447 LDRFKVINDTLGHTVGDFLLQGVTKRLLGGTRESDTLARWGGDEFIILLESIRGAEDAAV 506 Query: 421 LDSHL-----KQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNA- 474 + + F + + IG+S Y R + + L A++++ Sbjct: 507 AARRILDVLAEPFSVQGHEVFVSGSIGIS-VYPRDGED-----VQALLRCADIAMYRAKD 560 Query: 475 -PENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRM 531 +N + + +++ + L+ AL+ N F L QP + V E L+R Sbjct: 561 SGKNDYQFYESTMSTGGLERLKLEGDLRYALKRNEFVLHYQPRVNINTGLIVGAEALIRW 620 Query: 532 KGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENR-AKMPAHRFAINLSPTSV 590 + L+ P F+P+A E G I WV+ + + A +P R ++NLS Sbjct: 621 DLPDRGLLWPLDFIPLAEESGFIIPIGEWVLRTACLQCRKWQDAGVPHPRVSVNLSTHQF 680 Query: 591 CQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGT 650 + V ++L + + L E+TES + N+++A TLQ L ELG +AIDDFGT Sbjct: 681 KKDNLTSTVDRILKETGLSPGLLELEITESAMMENLEKAVATLQGLAELGVNVAIDDFGT 740 Query: 651 GYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEI 710 GY+S LK LKID SF+R+I SN D I SI L + + VVAE VE +E Sbjct: 741 GYSSLGYLKRFPIGALKIDQSFVRHIPSNIDDTAIAMSIISLGKTLNLKVVAEGVETQEQ 800 Query: 711 REAVLSLGIDYMQGYLIGKPQPLIDTLNEI 740 + + D QGYL +P + Sbjct: 801 LTVLRNYQCDEAQGYLFSQPVDADRMTEFL 830 >UniRef50_C6WUG6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WUG6_METML Length = 836 Score = 546 bits (1408), Expect = e-153, Method: Composition-based stats. Identities = 116/509 (22%), Positives = 208/509 (40%), Gaps = 32/509 (6%) Query: 254 MMWGAMRYGYKLISLLW-----AVVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFI 308 + + R+ LW I + + IYP T + V +++ Sbjct: 329 RILSSGRHDQLFYQALWDRVNTTGTWCGEIWNRRKNGDIYPERITISEVKDKDGKVTNYV 388 Query: 309 VNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRD--------APWSALCYLR 360 + + + +A +I+ LA+ DP+ +LPN L +R AL ++ Sbjct: 389 SVFTDI--SESKASSEQIEHLAFYDPLTNLPNRLLLLDRVRQAFSSSSRTGKKGALLFVD 446 Query: 361 IPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNT-ESHQERIT 419 + ++L G + + LS + G+ V + G++ + L + + Sbjct: 447 LDHFKVLNDTLGHSTGDLLLKLQAERLSHCVRAGDTVARFGGDEFVVVLEDLDRNATEAA 506 Query: 420 ALDSHL---------KQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSI 470 A+ + + +F IG++ + I LL + + + Sbjct: 507 AIAEQIGNKILSTLHEPCQFGTHQYQSTSSIGITLF--SGDEHEIEDLLKQADIS--MYQ 562 Query: 471 VTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITG-MRGDVYHEILL 529 A N R +Q +L + ++ + L+ A+E L Q + V E L+ Sbjct: 563 AKKAGRNTLRFFDPAMQEKLSVRASLESELRYAIEKQQLALYYQVQVDDNQRMVGAEALI 622 Query: 530 RMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMP--AHRFAINLSP 587 R +SP F+P+A E L + WVI +AE + A+N+S Sbjct: 623 RWIHPERGTVSPIEFIPIAEESALILDVGHWVINTACMQLAEWAKSVEKKHLMIAVNVSA 682 Query: 588 TSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDD 647 F Q + ++I+A +L E+TES L +V + L+ LG ++++DD Sbjct: 683 HQFRALDFVQSTQQAIDLHKIDASRLKLELTESVILEDVDDVIAKMHALKALGVKLSLDD 742 Query: 648 FGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVEN 707 FGTGY+S + LK + D +KID SF+R++ + D +V +I LA ++ V+AE VE Sbjct: 743 FGTGYSSLSYLKKLPLDQVKIDQSFVRDLAYDPNDAIMVKTIIDLANNFRINVIAEGVET 802 Query: 708 EEIREAVLSLGIDYMQGYLIGKPQPLIDT 736 E + + G QGYL G+P P+ Sbjct: 803 ELELDILKGYGCRLYQGYLFGRPVPIEQL 831 >UniRef50_B3EBJ5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=B3EBJ5_GEOLS Length = 965 Score = 546 bits (1408), Expect = e-153, Method: Composition-based stats. Identities = 116/464 (25%), Positives = 213/464 (45%), Gaps = 18/464 (3%) Query: 297 ITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRAL--------NRAL 348 I + S + I M T ++ I++LAY DPV LPN L NRA Sbjct: 496 IFNQSGQAEAIIG--MGRDITDRKTAESTIEQLAYHDPVTGLPNRTLLHDRLQLAINRAE 553 Query: 349 RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALR 408 RD+ A+ +L + + + + G + Q + + + L + + V +L G++ + Sbjct: 554 RDSQGVAILFLDLDRFKAINDSLGHAMGDQLLRLVGNRLLDCVRSSDTVARLGGDEFVVL 613 Query: 409 LNTESHQERI-TALDSHLKQF--RFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTV 465 ++ + + + + L+Q + D + + LL + Sbjct: 614 ISALDNDHAVGSVVMKILEQLCEPYQIDDHEVYTSSSIGISLFPRDGRDAEELLKNADMA 673 Query: 466 AELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--V 523 + A N + L +++ + + +++ALE FFL+ QP +R Sbjct: 674 --MYQAKEAGRNTCHFFSPELNMRATERLLLESTMRRALEREEFFLVYQPQMELRSGHIA 731 Query: 524 YHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFM-AENRAKMPAHRFA 582 E LLR + + ++ P++F+P+A E GL + WV+ + + P R A Sbjct: 732 GIEALLRWRHPDLGVVPPNNFIPIAEETGLIVPLGEWVLAEACRQAVRWQQEGQPPLRMA 791 Query: 583 INLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQ 642 +N+S Q + + ++L + ++ L E+TES + N ++A +TL+ L+++G Sbjct: 792 VNVSARQFRQRNLGLRIEKILMETGLDPALLELELTESAVMENPEEAILTLRQLKKMGIT 851 Query: 643 IAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVA 702 ++IDDFGTGY+S + LK+ D LKID SF++++ + D I +I LA K+ VVA Sbjct: 852 LSIDDFGTGYSSLSHLKHFPIDRLKIDRSFVKHVTRDHNDATIAEAIIALAHSMKLTVVA 911 Query: 703 EYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIRES 746 E +E+ E E + D MQGY + +P + ++ + ES Sbjct: 912 EGIEHSEQMEFMHQRHCDTMQGYYLSRPVTAEEFGTFLKRLGES 955 >UniRef50_Q39X25 Diguanylate cyclase/phosphodiesterase n=2 Tax=Geobacter RepID=Q39X25_GEOMG Length = 633 Score = 546 bits (1408), Expect = e-153, Method: Composition-based stats. Identities = 114/434 (26%), Positives = 191/434 (44%), Gaps = 17/434 (3%) Query: 318 RQRAVVRRIQRLAYVDPVVHLPNVRALNRALR--------DAPWSALCYLRIPGMEMLVK 369 + RI+++AY D + LPN R N LR A+ +L + +++ Sbjct: 184 ERSRAEERIRQMAYYDSLTGLPNRRLFNDRLRQSLALAQRHKRPLAVMFLDLDRFKLIND 243 Query: 370 NYGIMLRIQYKQKLSHWLSPLLE-PGEDVYQLSGNDLALRLNTESH-QERITALDSHLKQ 427 G + + ++ L G+ V + G++ + L+ S ++ T + Sbjct: 244 TLGHAVGDRLLMAVAKRLRNCCRREGDTVARQGGDEFIINLSAISDVKDAFTVAQKIIDV 303 Query: 428 FR--FFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMY 485 FR F DG + + L+ + + N + A Sbjct: 304 FRTPFVIDGYELFITTSIGISVYPHDGRSGDALVKNADVA--MYRAKEQGRNNCQLFAPE 361 Query: 486 LQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDS 543 + +++++ N +++ALE + F L QP + E L+R + + L+ P Sbjct: 362 MNARAFERLSLENDMRRALERDEFVLHYQPKVNVEHGQIACMEALVRWQHPSMGLVPPSR 421 Query: 544 FLPVAHEFGLSSSIDMWVIEHTLQF-MAENRAKMPAHRFAINLSPTSVCQARFPVEVSQL 602 F+P+A E GL + WV+ Q A A P + A+NLSP + Q V+++ Sbjct: 422 FIPLAEETGLIVPLGEWVLRTACQQNRAWQDAGYPTMQVAVNLSPRQLRQGDLSETVARV 481 Query: 603 LAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVN 662 LA+ + L+ EVTES + + ++ T + L +G +I+IDDFGTGY+S LK Sbjct: 482 LAETGLAPGWLVIEVTESILMDDAEETIRTFRRLDRMGVRISIDDFGTGYSSLHYLKKFP 541 Query: 663 ADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYM 722 LKID SF+R I SN D I ++ +A+ + VVAE VE E E + +L YM Sbjct: 542 VHTLKIDRSFVREIASNPDDEAIAGAVISMAKGLNLGVVAEGVETVEQMEVLRALNCRYM 601 Query: 723 QGYLIGKPQPLIDT 736 QG+L +P P Sbjct: 602 QGFLFSEPAPAEQF 615 >UniRef50_Q5P5U6 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P5U6_AZOSE Length = 740 Score = 546 bits (1407), Expect = e-153, Method: Composition-based stats. Identities = 117/505 (23%), Positives = 208/505 (41%), Gaps = 22/505 (4%) Query: 255 MWGAMRYGYKLISLLWAVVLM-----ISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIV 309 + + R+ +W+ + I + + IY + T + + S + + I Sbjct: 238 LLASGRHDRDFYREMWSAIERNGSWSGEISNRRKNGEIYNEWLTIHAVRNESGGIENCIA 297 Query: 310 NYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNR--------ALRDAPWSALCYLRI 361 Y + T QRA RIQ LA+ DP+ LPN L A R+ +A+ +L + Sbjct: 298 IYAEI--TDQRAAASRIQFLAHYDPLTLLPNRALLQDRMHQGLAHAAREGTRAAVLFLDL 355 Query: 362 PGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITAL 421 + + + G ++ Q+++ L + + V + G++ + L E+ + Sbjct: 356 DRFKTINDSLGHLVGDHLLQEVAQRLKASVREDDTVARRGGDEFIVMLPHVDSAEQAAHV 415 Query: 422 DSHLKQF---RFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENM 478 + + +G + + L+ + + + N Sbjct: 416 AGKIIEAMEQTIPVNGYVLNVSFSIGISVFPDDAMDPDTLIRNADIA--MYRSKASGRNQ 473 Query: 479 QRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDV-YHEILLRMKGENDE 537 + + +++A+ N L +A+E F LM QP G + E LLR + Sbjct: 474 FQFFTADMNAHALERLALENDLHRAVERGEFRLMFQPQFEGSGSIIGAEALLRWQHPQRG 533 Query: 538 LISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENR-AKMPAHRFAINLSPTSVCQARFP 596 L++P F+PVA E GL I WV+E Q + R A + ++N+S Q Sbjct: 534 LVTPAEFIPVAEETGLIVPIGTWVLERACQQVRAWRDAGLKKITVSVNISALQFSQKNLL 593 Query: 597 VEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYA 656 + +LLA IE L E+TES + + + L+E+G ++AIDDFGTGY+S + Sbjct: 594 ELIRRLLAVSNIEPGTLELELTESVLMHDHVATSGLMSELKEMGVRMAIDDFGTGYSSLS 653 Query: 657 RLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLS 716 L++ LKID SF+R++ I +I LA+ M V+AE VE + + + Sbjct: 654 YLRSFPISKLKIDQSFVRDLSDGGDAGAITGAIIGLAKNLNMRVIAEGVETAQQASFLQA 713 Query: 717 LGIDYMQGYLIGKPQPLIDTLNEIE 741 D QG+ +P + Sbjct: 714 QCCDEFQGHFFSQPVSPEKFAELLR 738 >UniRef50_Q608F9 Sensory box protein n=1 Tax=Methylococcus capsulatus RepID=Q608F9_METCA Length = 965 Score = 544 bits (1403), Expect = e-153, Method: Composition-based stats. Identities = 115/514 (22%), Positives = 208/514 (40%), Gaps = 28/514 (5%) Query: 254 MMWGAMRYGYKLISLLWAVVLM-----ISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFI 308 M + R+ W + I + I+P + + + ++ Sbjct: 455 RMLQSGRHDGAFYRRFWRALETEGHWSGEIWNRHRDGHIFPAWQSVSAVKGPDGSTTHYV 514 Query: 309 VNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNV--------RALNRALRDAPWSALCYLR 360 + + + + +I+ L+Y D + LPN + + A RD AL L Sbjct: 515 SIFTDI--SEFKRAEAQIRYLSYHDDLTGLPNRAYFQARLDQLIEAAARDRKQIALVVLD 572 Query: 361 IPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITA 420 + + + + G + + +++ + G+ V + G++ + L Sbjct: 573 LDRFKTINDSLGHSVGDELLCQVAERIQDCTGQGDFVARQGGDEFVVILADSDAVRAARV 632 Query: 421 ----LDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPE 476 + + K + + P +G+S + + + + A + + Sbjct: 633 ANAMISAIAKPAVAGGRTLIVTPSLGISLYPHDAGDSESLI----KSADAAMYHAKSLGR 688 Query: 477 NMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPI--TGMRGDVYHEILLRMKGE 534 N + + + +++A+ N L QAL + F L QP R + E L+R + Sbjct: 689 NTYQFFSAEMSAVATERLALENALHQALSNGEFRLYYQPQIEVCSRRLIGLEALIRWRHP 748 Query: 535 NDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRA-KMPAHRFAINLSPTSVCQA 593 + P F+P+A E G+ I WV+E + E +A + A+NLSP + + Sbjct: 749 EVGWVPPLRFIPLAEETGIIHRIGRWVLEEACRQQREWQAAGLCIVPVAVNLSPLQLQKD 808 Query: 594 RFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYA 653 FP +V LL+ ++ L E+TE+ + +V + L+ L+E G + +IDDFGTGY+ Sbjct: 809 DFPEQVEALLSGCRLAPGLLELELTETAVMRDVGRMSDMLRKLKERGTRFSIDDFGTGYS 868 Query: 654 SYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREA 713 S L D LKID SFIR++ I +I LA+ + VVAE VE E E Sbjct: 869 SLGYLNRFPVDKLKIDQSFIRDVTRREDHAAITRAIIALAKQLHLKVVAEGVETAEQLEF 928 Query: 714 VLSLGIDYMQGYLIGKPQPLIDTLNEIEPIRESA 747 + G D QG+ +P P + + RE A Sbjct: 929 LERAGCDGAQGFYFSRPVPADEIAGWLS--REGA 960 >UniRef50_C6MMM5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. M18 RepID=C6MMM5_9DELT Length = 1097 Score = 544 bits (1403), Expect = e-153, Method: Composition-based stats. Identities = 105/481 (21%), Positives = 198/481 (41%), Gaps = 18/481 (3%) Query: 278 IHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVH 337 + +Y+ ++ + + +++ V +++ + T ++ +++ + D + Sbjct: 480 LRNYRKDGSLFWNALSVSPVLNAAGEVTNYVGIVNDI--TERKRYEEQLEYQSNHDGLTG 537 Query: 338 LPNV--------RALNRALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSP 389 LPN +AL A R +A+ ++ + + + + G + + Q + LS Sbjct: 538 LPNRNLLGDRIGQALTYAERYQRQTAVFFIDLDHFKFINDSLGHDMGDKLLQIAARRLSE 597 Query: 390 LLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLKQF---RFFWDGMPMQPQIGVSYC 446 + + V + G++ + L+ + E + ++ + + Sbjct: 598 CVRSIDTVARHGGDEFVIVLSDLAVSEDAAKVARKIQDAVCRPYQIGEHELVVSCSTGIS 657 Query: 447 YVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEH 506 + +LL + + N + L + ++ M L++ALE Sbjct: 658 LYPKDGSDAQVLLKNADVA--MYRAKQCGRNNFQFYTGDLNDIVLARLTMEKYLRRALER 715 Query: 507 NHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEH 564 + F + QP + E L+R + ISP SF+P+A E GL +I WV+ Sbjct: 716 DEFLVHYQPKVDLLSGRITGMEALVRWQSPELGFISPASFIPLAEETGLIVAIGEWVLRT 775 Query: 565 TLQF-MAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNAL 623 A +P A+NLSP Q V ++ + + + EV ES + Sbjct: 776 ACAQNKAWQDDGLPPMVVAVNLSPRQFRQEDLADTVHRIAEETGLAPRYIELEVVESLLM 835 Query: 624 TNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDY 683 +V A L L+ELG Q+ +DDFGTGY+S + LK D++KID SF+R+I + Sbjct: 836 DDVDGAVAMLDALKELGVQLTMDDFGTGYSSLSYLKRFPFDMMKIDQSFVRDITRDPGSA 895 Query: 684 QIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPI 743 IV ++ LA + VVAE +E E + L D MQG+ +P P + + Sbjct: 896 AIVRTVISLAHTLNLRVVAEGIETEGQLGYLRGLACDEMQGFYFSRPVPAAEFEQMLRDQ 955 Query: 744 R 744 R Sbjct: 956 R 956 >UniRef50_A0LD38 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LD38_MAGSM Length = 834 Score = 544 bits (1403), Expect = e-153, Method: Composition-based stats. Identities = 124/502 (24%), Positives = 213/502 (42%), Gaps = 24/502 (4%) Query: 260 RYGYKLISLLW-----AVVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAV 314 R+ ++ + +W I ++ IYP + T + + + I + + Sbjct: 311 RHTHEFYAEMWKKIWQTGQWQGEIWDRRHNGEIYPKWLTINAVYDERGHLVNCIGIFSDI 370 Query: 315 LATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRDAPWSA--------LCYLRIPGMEM 366 +R +A R+++LA+ D + LPN L A +A L ++ + + Sbjct: 371 --SRLKATEERLEQLAFFDCLTKLPNRAHFQSRLDHALTAANRRQNKVGLIFIDLDHFKH 428 Query: 367 LVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERI--TALDSH 424 + + G Q + + + + + V ++ G++ + L + ++ + Sbjct: 429 INDSMGHNAGDQLLIEAAKRIQSCVREEDTVARMGGDEFTIILADLTDTAKVMTNVALTI 488 Query: 425 LKQF--RFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRG 482 L+ F + + + + LL+ +T + + N Sbjct: 489 LESFTHPIVLEDKKLFIGCSLGMAIYPDDSGNAALLIKHADTA--MYRAKESGRNRYSFY 546 Query: 483 AMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELIS 540 + + + ++++ + L+ A++H F L QP V E LLR + +IS Sbjct: 547 TAEMNAQAQSRISLESELRYAIDHKAFELYYQPKVDAHSSEIVGFEALLRWIHPTEGVIS 606 Query: 541 PDSFLPVAHEFGLSSSIDMWVIEHTLQFMAE-NRAKMPAHRFAINLSPTSVCQARFPVEV 599 P+ F+P+A E GL ++I V+E Q + NR AINLS + Q Sbjct: 607 PNQFIPIAEESGLIAAIGNQVVEMACQGLQRINRCTPKPLPVAINLSVRQLRQDNLVNYF 666 Query: 600 SQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLK 659 SQ LA Y IEA QL EVTES ++++ LQ L +LG +IAIDDFGTGY+S + LK Sbjct: 667 SQTLANYGIEAEQLELEVTESFLAKPIEKSAALLQALHQLGYKIAIDDFGTGYSSLSYLK 726 Query: 660 NVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGI 719 N LKID SF+ + N IV +I +A +VAE VE + LG Sbjct: 727 NFPIHTLKIDRSFVMEVAHNQESRTIVQAIISMAHALGYDLVAEGVETAAQVNVLQGLGC 786 Query: 720 DYMQGYLIGKPQPLIDTLNEIE 741 MQG+ +P PL + L + Sbjct: 787 GIMQGFHYARPAPLHEILEILS 808 >UniRef50_A0L9T5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=A0L9T5_MAGSM Length = 1275 Score = 543 bits (1401), Expect = e-153, Method: Composition-based stats. Identities = 111/505 (21%), Positives = 204/505 (40%), Gaps = 23/505 (4%) Query: 255 MWGAMRYGYKLISLLWAVVL-----MISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIV 309 + + R+ + +W +L I + I+P + T I ++ +F+ Sbjct: 760 ILKSGRHDEQFYEQMWNEMLSEGHWQGEIWDRRKSGEIFPKWLTIDAIRDEQGVISNFVG 819 Query: 310 NYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRD--------APWSALCYLRI 361 +M + T+Q+ ++++LAY DP+ LPN L L ++ + Sbjct: 820 LFMDI--TQQKETEEQLEKLAYYDPLTELPNRALFRDRLEQEMRLSARGGKSLGLFFIDL 877 Query: 362 PGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITAL 421 + + + G +++ + L + V +L G++ + L + + Sbjct: 878 DRFKYVNDSLGHDKGDDLLIQVAGRIKHHLRTSDTVARLGGDEFTVILPGIEQTNDVARI 937 Query: 422 DSHLKQ---FRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENM 478 + + F G + + L +T + Sbjct: 938 AGAIVKSLGEVFVLQGHEVFIGGSIGIAMHPDDGEDYETLTKHADTA--MYRAKEEGRGT 995 Query: 479 QRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMR--GDVYHEILLRMKGEND 536 + + ++++ L+QA+E N L QP ++ E L+R Sbjct: 996 YKFFTSDMNEINGRRLSLERALRQAVECNQLTLHYQPKVDVKQCRITGMEALVRWNHPEQ 1055 Query: 537 ELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAEN-RAKMPAHRFAINLSPTSVCQARF 595 L+SP F+P+A E GL +I WV++ R+ + AINLS A Sbjct: 1056 GLVSPVDFIPIAEETGLIITIGEWVMQQACMDAKRLARSSRHPLQVAINLSAKQFQDALL 1115 Query: 596 PVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASY 655 ++ + L + + L E+TES A+ +V + + L+ LG +++IDDFGTGY+S Sbjct: 1116 VAKLERSLQQSGLAPELLEVEITESLAMGDVNRTIEQIGELRALGVKVSIDDFGTGYSSL 1175 Query: 656 ARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVL 715 + LK + + LKID SFI+++ +S D IV+SI +A + VVAE VEN+ + Sbjct: 1176 SYLKKLPLNALKIDKSFIQDLYLDSDDTAIVSSILSMASALGLSVVAEGVENQAQIHFLC 1235 Query: 716 SLGIDYMQGYLIGKPQPLIDTLNEI 740 +QGY KP P + Sbjct: 1236 EKECPTIQGYFFSKPLPFEAFEKFL 1260 >UniRef50_C6WZ79 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WZ79_METML Length = 1250 Score = 543 bits (1401), Expect = e-153, Method: Composition-based stats. Identities = 120/480 (25%), Positives = 213/480 (44%), Gaps = 31/480 (6%) Query: 280 SYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLP 339 + +Y TT S+I + T+++A + LA DP+ +LP Sbjct: 775 NRAKDGSLYWVDTTIAPFIGDDGKPQSYISIRTDI--TQRKAAEDKSNYLALYDPLTNLP 832 Query: 340 NVR--------ALNRALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLL 391 N R AL A+R AL +L + + L G + Q+++ L+ + Sbjct: 833 NRRLLLDRLTHALASAMRTGRGGALLFLDLDHFKTLNDTLGHDVGDLLLQQVAECLTACV 892 Query: 392 EPGEDVYQLSGNDLALRLNTESHQERITALDSH----------LKQFRFFWDGMPMQPQI 441 G+ V +L G++ + L S QE A + ++ ++F + + Sbjct: 893 REGDTVARLGGDEFVVILEGLSEQEVEAAAQAEVVGEKILNKFIEPYQFKGYEYHITSSV 952 Query: 442 GVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAP--ENMQRRGAMYLQRELKDKVAMMNR 499 G++ L EL A++++ N +Q ++ +V M + Sbjct: 953 GITLF------GKNNLKSDELLKQADIAMYQAKKLGRNALSFFDPKMQEGIQARVDMEHE 1006 Query: 500 LQQALEHNHFFLMAQPITGMRGD-VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSID 558 L++AL+ N F L Q G+ V E L+R LI P+ F+ +A + G+ SI Sbjct: 1007 LRKALDKNEFQLFYQMQVGLSDRAVGAEALIRWIHPERGLIPPNEFVSIAEDCGMILSIG 1066 Query: 559 MWVIEHTLQFMAENRA--KMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFE 616 WVI+ + + + ++N+S QA F +V+ +A++ I L E Sbjct: 1067 AWVIDTACAQLKRWEQSERTRSLTLSVNVSAKQFRQADFVEQVTTAIARHGINPMLLKLE 1126 Query: 617 VTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNI 676 +TES L +++ A + L+++G + ++DDFGTGY+S L+ + LKID SF+R+I Sbjct: 1127 LTESALLDHIEDAVAIMNALKDIGIRFSLDDFGTGYSSLQYLRLLPLYQLKIDRSFVRDI 1186 Query: 677 VSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDT 736 S+ + IV +I +A + V+AE VE + + +L G + QGYL +P P+ Sbjct: 1187 ASSIGNQAIVRTIIAMAHTLNLNVIAEGVETQVQQGILLDSGCMHYQGYLFSEPVPIDAF 1246 >UniRef50_C5T1I4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T1I4_ACIDE Length = 830 Score = 543 bits (1400), Expect = e-153, Method: Composition-based stats. Identities = 112/454 (24%), Positives = 194/454 (42%), Gaps = 29/454 (6%) Query: 306 SFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL--------RDAPWSALC 357 S + + + T ++ + I+RLA+ D + LPN R L L R + AL Sbjct: 375 SVVSHGFTMDITDRKRAEQEIERLAFYDALTGLPNRRMLLDRLQRAVAATSRTQQFGALL 434 Query: 358 YLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQER 417 ++ + + L G + +++ L + + V + G++ + L T + Sbjct: 435 FIDLDNFKDLNDTLGHDMGDHLLSQVAARLLACVRETDTVARFGGDEFVVMLETLRPELT 494 Query: 418 ITALDSHL----------KQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAE 467 A + + + F P IG++ L + EL A+ Sbjct: 495 EAASQAEIVAEKLLASLNQPFALGGQQHYSTPSIGITLF------GDERLSVDELLKRAD 548 Query: 468 LSIV--TNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDV-Y 524 L++ A N QR +Q + + + L+Q L + QP+ R + Sbjct: 549 LAMYQAKGAGRNTQRFFDPDMQAAVNARSNLEADLRQGLARGELCVYYQPVVDHRARLLG 608 Query: 525 HEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAEN--RAKMPAHRFA 582 E L+R + +ISP F+P+A + GL + V++ + R + + Sbjct: 609 VEALVRWRHPVRGMISPADFIPLAEQTGLILPLGQQVLQTACGQLQRWGERKQTRHLSVS 668 Query: 583 INLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQ 642 +N+S Q F EV Q L + +L E+TES L +V+ ++ L+ G Sbjct: 669 VNVSARQFRQPGFVAEVLQTLQGCGADPRKLKLELTESLLLGDVEDTIARMEQLKREGVG 728 Query: 643 IAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVA 702 A+DDFGTGY+S + LK + D +KID F+R+++++ D IV +I LA+ + VVA Sbjct: 729 FALDDFGTGYSSLSYLKRLPLDQVKIDQGFVRDVLTDPNDAAIVRTILALAQSLDLEVVA 788 Query: 703 EYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDT 736 E VE + G + QGYL G+P P+ D Sbjct: 789 EGVETTGQLAFLRLHGCEGFQGYLFGRPGPVEDI 822 >UniRef50_B9YZ47 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9YZ47_9NEIS Length = 953 Score = 543 bits (1400), Expect = e-153, Method: Composition-based stats. Identities = 122/471 (25%), Positives = 218/471 (46%), Gaps = 26/471 (5%) Query: 292 TTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRD- 350 I S V ++ + + TR+R + + A D + L N R L Sbjct: 467 MVSAPIFDSQGGVSGKVLVFHDM--TRERLYIESLSWQASHDALTGLTNRHEFERRLTRL 524 Query: 351 -------APWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGN 403 + L YL + +++ G + +++ LS L G+ + +L G+ Sbjct: 525 LEATVGRQQYHVLMYLDLDQFKVVNDTCGHAAGDELLRQVCVLLSQQLREGDTLARLGGD 584 Query: 404 DLALRLNTESHQER---ITALDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLG 460 + + L + L + F W+G P + + ++ + L Sbjct: 585 EFGVLLQNCPPEAALPVAEKLRQTVCDLHFSWNGQPFAISASIGVVH----ISGVPTTLK 640 Query: 461 ELNTVAELSIVTNAPENMQRRGAMYLQRELK-----DKVAMMNRLQQALEHNHFFLMAQP 515 E+ A+++ A E + R +Y + + ++ + RL +ALE + F L AQ Sbjct: 641 EVMRAADVACYM-AKEKGRNRAQLYAADDAELTVRYGEMEWVQRLHRALEDDRFRLYAQT 699 Query: 516 ITGMRGDV---YHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAEN 572 I + + E+LLR+ E L+ P +F+P A + L ++ID WV+ L +A Sbjct: 700 IAPLGEGSAAPHFELLLRLLDEYGMLVPPSAFIPAAERYNLMATIDRWVVSTALAMLAAR 759 Query: 573 RAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQIT 632 + AINLS S+C F + LA I+ L FEVTE++A+ N+ A Sbjct: 760 TSPGSEWTCAINLSGASLCDDDFLGFLRAELAGSGIDPAHLCFEVTETSAIANLACATEF 819 Query: 633 LQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHL 692 ++ L++LGC+ ++DDFG G +S+ LK++ D LKIDG F+++++ + +D+ +V I H+ Sbjct: 820 MRELRQLGCRFSLDDFGAGMSSFGYLKHLPVDFLKIDGGFVKDMLDDPVDHAMVEVINHI 879 Query: 693 ARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPI 743 + +AE+ E+ I EA+ +G+DY QGY + +P PL + L + P Sbjct: 880 GHVMGKQTIAEFAEHPGILEALKRMGVDYAQGYGVARPLPLAEVLAQHFPA 930 >UniRef50_Q2BHU8 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BHU8_9GAMM Length = 892 Score = 543 bits (1400), Expect = e-153, Method: Composition-based stats. Identities = 118/515 (22%), Positives = 215/515 (41%), Gaps = 41/515 (7%) Query: 254 MMWGAMRYGYKLISLLWAVVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMA 313 MM + Y +W + + IYP + T + +S+ + +++ + Sbjct: 392 MMESLSKNNY-WQGEVW---------NQRKSGEIYPQHLTITAVQTSAGEITNYVGAFTD 441 Query: 314 VLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRDA--------PWSALCYLRIPGME 365 + T+++ I +LA+ D + LPN R+L L A A+ ++ + + Sbjct: 442 I--TQRKQDEADIHQLAFYDSLTGLPNRRSLQERLDSALSSCRHTRQLGAVFFIDLDNFK 499 Query: 366 MLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQE--------- 416 L G + ++++ L+ + + V +L G++ + L E Sbjct: 500 NLNDTAGHDQGDKLLVEVANRLNSCVRNADMVARLGGDEFIVILENLGVDESNVLAQVKD 559 Query: 417 -RITALDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNA- 474 + + IG++ + E+ +++++ Sbjct: 560 IVAKVILTIQAPLTIGTQAYHPTCSIGIALFSEKD-------FSDEVMKRSDMAMYQAKS 612 Query: 475 -PENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDVYHEILLRMKG 533 +N R + L M L+ AL + L QP + + E LLR K Sbjct: 613 SGKNTYRFFDPVAEEALCSLARMDADLRFALSNQQLELHYQPQYRCQTLIGAEALLRWKH 672 Query: 534 ENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAK--MPAHRFAINLSPTSVC 591 + ++SP F+P+A + GL I WVI + + + + + A+N+S C Sbjct: 673 PDRGMVSPAEFIPLAEDTGLILPIGEWVIRQACKQLQQWQERPETAELFIAVNVSARQFC 732 Query: 592 QARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTG 651 Q F V QLL Y + A +L E+TES L +V+ +Q L+ G + A+DDFGTG Sbjct: 733 QDNFVESVRQLLNTYGVSAEKLKLELTESLVLMDVEDTIQKMQALRSYGIRFALDDFGTG 792 Query: 652 YASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIR 711 Y+S + LK + D +KID SFIR++ + D +IV +I + + + V+AE VE +E Sbjct: 793 YSSLSHLKRLPLDQIKIDRSFIRDVPEDQDDSEIVQAIIAMGQNLGLNVLAEGVETDEQL 852 Query: 712 EAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIRES 746 + L +QG+L+G+P + P S Sbjct: 853 AFLTELDCLDIQGFLLGRPSSIDKFETTYIPANMS 887 >UniRef50_Q2YC85 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2YC85_NITMU Length = 951 Score = 543 bits (1400), Expect = e-152, Method: Composition-based stats. Identities = 129/482 (26%), Positives = 226/482 (46%), Gaps = 25/482 (5%) Query: 271 AVVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLA 330 V L + +P + I + + ++ + V ++ A+ ++ A Sbjct: 473 TVSLNSHALLIRRDGQTFPIEDSAAPIRDQNGSIIGVVLVFRDVSHAQKMAME--MRYQA 530 Query: 331 YVDPVVHLPNVRALNRALRD-------APWSALCYLRIPGMEMLVKNYGIMLRIQYKQKL 383 D + L N R L+ A L YL + +++ G + + ++L Sbjct: 531 THDALTGLINRHEFERRLKQVLERDKGADEHTLLYLDLDQFKIVNDTCGHLAGDELLKQL 590 Query: 384 SHWLSPLLEPGEDVYQLSGNDLALRLNTE---SHQERITALDSHLKQFRFFWDGMPMQPQ 440 + L L + + +L G++ L L S L +++FRF W+ Sbjct: 591 TSLLQAKLRKDDTLARLGGDEFGLLLERCPRGSAFRVAEVLRQTVQEFRFVWEERIFSLG 650 Query: 441 IGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRE-----LKDKVA 495 I + +L +T L A + + R +Y + + ++ Sbjct: 651 ISIGLATFSGGEQTFSDVLRMADTACFL-----AKDKGRNRVQLYASDDKNLEKRRGEMG 705 Query: 496 MMNRLQQALEHNHFFLMAQPITGMR---GDVYHEILLRMKGENDELISPDSFLPVAHEFG 552 + RL +AL+ F L +Q I + ++EILLRMKGEN EL+ P +F+P A +G Sbjct: 706 WVERLHKALDKQRFVLYSQKILPLSAPSSTSHYEILLRMKGENGELVPPMAFIPAAERYG 765 Query: 553 LSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQ 612 L +D WVI + A + ++ INLS S+C V + QI+ Sbjct: 766 LMPQLDRWVITNAFAQYASHPSRGIKDTCTINLSGASICDEHLYDFVVDQFKQSQIDPAG 825 Query: 613 LIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSF 672 + FE+TE+ A+ N+ QA ++ L+ELGC+ ++DDFG+G +S+ LK++ D LKIDG+F Sbjct: 826 ICFEITETVAIANLTQAATLIRKLKELGCRFSLDDFGSGMSSFTYLKHLLVDYLKIDGAF 885 Query: 673 IRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQP 732 I+ ++S+ +D+ +V +I H+ + K+ +AE+VE E EA+ +G+DY QGY I +P+P Sbjct: 886 IKGMLSDPIDHAMVEAINHIGHVMKIQTIAEWVEEESFLEALRKIGVDYAQGYAIEEPRP 945 Query: 733 LI 734 I Sbjct: 946 AI 947 >UniRef50_Q21R50 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Rhodoferax ferrireducens T118 RepID=Q21R50_RHOFD Length = 1052 Score = 543 bits (1399), Expect = e-152, Method: Composition-based stats. Identities = 118/525 (22%), Positives = 213/525 (40%), Gaps = 37/525 (7%) Query: 242 STNYTLSLLLPL--MMWGAMRYGYKLISLLWAVVLM-----ISIHSYQNYIPIYPGYTTQ 294 T Y+ + + + R+ + +W ++ I + + ++P + T Sbjct: 528 ITGYSAPEAVGQNPRLLSSGRHDAAFYAAMWDSLVREGAWQGEIWNRRKNGEVFPEWLTI 587 Query: 295 LTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL------ 348 + + ++ + + +++ +I+ LA+ D + LPN R L L Sbjct: 588 SAVKDPAGQATHYVATFTDLST--RKSAEDQIKSLAFYDTLTGLPNRRLLLDRLKQALAS 645 Query: 349 --RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLA 406 R AL Y+ + + L YG + Q Q+++ LS L G+ V + G+ Sbjct: 646 GARHRRQGALLYIDLDDFKTLNNTYGHDVGDQLLQEVAQRLSHYLRAGDTVARPGGDSFV 705 Query: 407 LRLNTESHQERITALDSH----------LKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIY 456 + L S A ++ + ++ IGV+ R Sbjct: 706 VLLEALSTNSVEAATEAENTGEKIRLALSQPYQIADHAHRSTASIGVTLFDDRQQEG--- 762 Query: 457 LLLGELNTVAELSIVTN--APENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQ 514 + E AEL++ A N R +Q + A+ L++A+ N F L Q Sbjct: 763 --IDEPLKRAELAMYQAKTAGRNTLRFFDPQMQTAVMAMAALEADLREAVRSNQFLLYYQ 820 Query: 515 PITGMRGDV-YHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENR 573 V E L+R + L+ P F+P+A + GL + WV+E +A Sbjct: 821 AQVSGERQVAGVEALVRWQHPVRGLVPPAEFIPLAEQTGLILPLGQWVLETACAQLAAWA 880 Query: 574 AKMP--AHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQI 631 ++ A+N+S QA F +V L + +L E+TES + + + Sbjct: 881 SQPERAHLTVAVNVSALQFHQADFVAQVLAALKRAGANPQRLKLELTESLLVHDAEDVIA 940 Query: 632 TLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICH 691 + L+E G ++DDFGTGY+S + LK + + LKID F+R+I+ ++ D I + Sbjct: 941 KMITLKEQGVGFSLDDFGTGYSSLSYLKRLPLNQLKIDQGFVRDILHDANDAAIAKMVVA 1000 Query: 692 LARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDT 736 LA + V+AE VE E R+ + + G QG+L + P+ Sbjct: 1001 LADTLGLSVIAEGVETEAQRDFLAAQGCHAYQGHLYSRALPIDAF 1045 >UniRef50_A1KA22 GGDEF/EAL/PAS/PAC/GAF-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KA22_AZOSB Length = 1006 Score = 543 bits (1399), Expect = e-152, Method: Composition-based stats. Identities = 116/472 (24%), Positives = 189/472 (40%), Gaps = 22/472 (4%) Query: 285 IPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRAL 344 ++ T L + S V +A + +RA IQRLA+ D + LPN + Sbjct: 528 GTVWAEVVTTLGLNRRSGRVE---FRAVARDISERRAAEAEIQRLAHYDQLTGLPNRSLV 584 Query: 345 NRA--------LRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGED 396 R A+ + + + + G + +++ L +L G+ Sbjct: 585 KDRFRYAASLTQRRRGQLAVMFFDLDHFKNINDTLGHDFGDRLLVEVARRLESVLRGGDT 644 Query: 397 VYQLSGNDLALRLNTESHQERITALDSHLK----QFRFFWDGMPMQPQIGVSYCYVRSPV 452 V +L G++ L + L+ + + P IG++ P Sbjct: 645 VCRLGGDEFVFLLPDTDAEGAARVAAKLLEAVAQPLVLDHQELTVTPSIGIAM----YPD 700 Query: 453 NHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLM 512 + N A + N R +Q + + N L+ AL+ F L Sbjct: 701 DGTDFDTLSRNADAAMYQAKREGRNGFRFFTEAMQARSTRTLLLANALRHALDRGQFSLH 760 Query: 513 AQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMA 570 QP + V E LLR +SP F+P+A GL + I WV+ + Sbjct: 761 YQPQVSLADGRVVGAEALLRWTHPEFGPVSPGEFVPIAESNGLIAQIGEWVLREAVAQSR 820 Query: 571 EN-RAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQA 629 +P A+NLS P VSQ++ + + Q+ E+TE+ A+ + + A Sbjct: 821 RWLDEGLPPLVMAVNLSAAQFRNPNLPELVSQVIEEAGLPPHQVELELTEAVAMDDPQSA 880 Query: 630 QITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASI 689 + L G +++IDDFGTGY+S LK LKID SF+R+I + D IV++I Sbjct: 881 VRVMDALFARGIRMSIDDFGTGYSSLGYLKRFKVGKLKIDQSFVRDIGDDPDDKAIVSAI 940 Query: 690 CHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIE 741 HLA ML VAE VE + + + G D +QGY +P P + ++ Sbjct: 941 IHLAGSLGMLTVAEGVETLDQLDFLRQQGCDTVQGYYFSRPLPAEAFVGYLQ 992 >UniRef50_A1ALY4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ALY4_PELPD Length = 1238 Score = 543 bits (1399), Expect = e-152, Method: Composition-based stats. Identities = 110/501 (21%), Positives = 204/501 (40%), Gaps = 28/501 (5%) Query: 255 MWGAMRYGYKLISLLWAVVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAV 314 +W +R W + P + T+ V ++I + + Sbjct: 741 LWRGIRKRGSWQGEFW---------CRHKNGEVSPQWMVVNTVHDRQGTVTNYIALFTDI 791 Query: 315 LATRQRAVVRRIQRLAYVDPVVHLPNVR--------ALNRALRDAPWSALCYLRIPGMEM 366 A Q++ +RIQ +A+ D + +LPN AL +A R+ A+ ++ + + Sbjct: 792 SA--QKSQEQRIQHIAHHDALTNLPNRLLCMERLILALQQAHRNGRHVAVIFIDLDHFKN 849 Query: 367 LVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSH-- 424 + + G + ++ LS + G+ V +L G++ + L +I + H Sbjct: 850 INDSLGHHVGDCVLVTAANRLSMGVRDGDTVSRLGGDEFVIILADIEDSHQIEEIMKHRL 909 Query: 425 --LKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRG 482 L + + G + + LL +T + N Sbjct: 910 LPLMRQPYDAGGYELHCSCSIGISIFPEDGLDKDTLLRNADTA--MYRAKEVGRNNYHFY 967 Query: 483 AMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDVYH--EILLRMKGENDELIS 540 L ++++ L++ +E N L QP + + E LLR + + +IS Sbjct: 968 TEELNSRAMQRLSIETSLRKGIERNELLLHYQPKLDLHTGKPYGLEALLRWQHPDHGMIS 1027 Query: 541 PDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRA-KMPAHRFAINLSPTSVCQARFPVEV 599 P F+P+A E GL I VI + + ++ + M ++N+S RF ++ Sbjct: 1028 PMEFIPIAEETGLIIPIGKQVIRNACRQLSRWSSVGMSHICLSLNVSAVQFRDRRFVEDL 1087 Query: 600 SQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLK 659 QL+ + + ++ E+TE+ + + + ++ L++ G +IDDFGTGY+S L Sbjct: 1088 VQLVREEGVSPHRIELELTETMLMEDAVRTIRVMETLKDEGFLFSIDDFGTGYSSLNYLH 1147 Query: 660 NVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGI 719 D LKID SFIR ++ D I+ +I L M V+AE VE E+ A+ + G Sbjct: 1148 RFPIDCLKIDRSFIRGMLERPADLAIIKAIIGLGHTLDMQVIAEGVEKEDEYRALRAAGC 1207 Query: 720 DYMQGYLIGKPQPLIDTLNEI 740 D +QGY + +P + Sbjct: 1208 DGIQGYFVARPLTPEQVPEWL 1228 >UniRef50_Q2BMA7 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMA7_9GAMM Length = 932 Score = 543 bits (1399), Expect = e-152, Method: Composition-based stats. Identities = 114/439 (25%), Positives = 199/439 (45%), Gaps = 20/439 (4%) Query: 318 RQRAVVRRIQRLAYVDPVVHLPNVRALNRALRDAP--------WSALCYLRIPGMEMLVK 369 ++ R++ +A D + LPN L L +A A+ ++ + +++ Sbjct: 492 ERKMAEERVKHMALHDALTGLPNRLLLEERLENALSDAKSHQWQLAVLFIDLDRFKLVND 551 Query: 370 NYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLKQ-- 427 G Q ++++ L ++ + V +L G++ + LN + I + ++Q Sbjct: 552 TLGHHEGDQLLVEVANRLHQVIGANDTVARLGGDEFVIVLNEIAGSTEINGVIEDIQQNF 611 Query: 428 ---FRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAM 484 + M + P IGV+ P + + N A + + N + Sbjct: 612 KPAVKLALQDMFVTPSIGVAI----YPEDGETPVQLMKNADAAMYHAKASGRNCAQYFNR 667 Query: 485 YLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPD 542 L LK+++++ N L QAL+ F L QP ++ + + E L+R +ISPD Sbjct: 668 SLDDSLKERISLENALNQALKLGQFELYYQPQLDVKSNRIIGAEALIRWNHPEKGMISPD 727 Query: 543 SFLPVAHEFGLSSSIDMWVIEHTLQFMAENR-AKMPAHRFAINLSPTSVCQARFPVEVSQ 601 +F+P+A E GL I WV+ +A+ R ++NLS V + F EV+ Sbjct: 728 AFIPLAEESGLIVDIGSWVLHQASSQLAQWRKQGFDQLSVSVNLSALQVQKESFAREVAD 787 Query: 602 LLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNV 661 ++ +Y + L E+TES + N ++ L + LG QI++DDFGTGY+S + LK Sbjct: 788 VIREYGVPEACLDLELTESMIMRNAEETIAALDKIHNLGIQISVDDFGTGYSSLSYLKRF 847 Query: 662 NADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDY 721 D LKID SF+++I ++ D I +I +A + V+AE VE E + G + Sbjct: 848 PLDKLKIDRSFVQDITVDTDDAMICKTIISMAHNLNLQVIAEGVETNAQLELLRDYGCEQ 907 Query: 722 MQGYLIGKPQPLIDTLNEI 740 QGYL KP P+ + Sbjct: 908 YQGYLFAKPLPVEQMTEHL 926 >UniRef50_A1TI51 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=15 Tax=cellular organisms RepID=A1TI51_ACIAC Length = 1499 Score = 543 bits (1399), Expect = e-152, Method: Composition-based stats. Identities = 124/501 (24%), Positives = 208/501 (41%), Gaps = 37/501 (7%) Query: 270 WAVVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRL 329 WA + + H + + +T + + + +++A R IQRL Sbjct: 1010 WAGEI-VQFHRDGRRLDVEGRWTLIQGEQGQPDAILA-----IDTDIGQRKATEREIQRL 1063 Query: 330 AYVDPVVHLPNVRALNRALRDA--------PWSALCYLRIPGMEMLVKNYGIMLRIQYKQ 381 A+ D + LPN L +R A AL ++ + + L G Q Sbjct: 1064 AFYDSLTGLPNRMLLMDRMRHALATAQRRRQGGALLFIDLDNFKTLNDTLGHDQGDVLLQ 1123 Query: 382 KLSHWLSPLLEPGEDVYQLSGNDLALRLNTESH---QERITA-------LDSHLKQFRFF 431 +++ L+ + + V +L G++ + + S + ++A L + Sbjct: 1124 QVAARLNTCVRSVDTVARLGGDEFVVMIEGLSTHPGELAMSARTVGEKILAVLATPYVLQ 1183 Query: 432 WDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTN--APENMQRRGAMYLQRE 489 P IGV+ + +GEL A+L++ A N R +Q Sbjct: 1184 GYHYRSTPSIGVAPF-----GDGRTSTVGELLKQADLAMYQAKTAGRNTLRFFDPGMQAV 1238 Query: 490 LKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDV-YHEILLRMKGENDELISPDSFLPVA 548 + + + N L+ AL F L QP RG V E L+R ++SP F+P+A Sbjct: 1239 VTARAELENDLRTALAREQFMLHYQPQIDRRGSVTGVEALVRWPHPQRGMVSPGEFIPLA 1298 Query: 549 HEFGLSSSIDMWVIEHTLQFMAENRA--KMPAHRFAINLSPTSVCQARFPVEVSQLLAKY 606 E GL + WV+ +A + A+N+S F +V + + Sbjct: 1299 EETGLVLPLGRWVLHTACAQLARWQHVPGRGHLSMAVNVSSRQFHHEAFVEDVVRAITAT 1358 Query: 607 QIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLL 666 A +L E+TES + +++ T+ L+ G ++DDFGTGY+S + LK + D L Sbjct: 1359 GAPASRLKLELTESLFVEDMETTIATMAALRSHGVGFSLDDFGTGYSSLSYLKRMPLDQL 1418 Query: 667 KIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYL 726 KID SF+R+++++ D IV +I L+R + V+AE VE E R + G QGY Sbjct: 1419 KIDQSFVRDLLADPNDAAIVDTIIALSRSLGLDVIAEGVETAEQRTRLEQAGCRAYQGYF 1478 Query: 727 IGKPQP---LIDTLNEIEPIR 744 +P P L D L + P R Sbjct: 1479 FSRPLPETALEDFLVQKLPSR 1499 >UniRef50_Q1NJA1 PAS:GGDEF:EAL n=7 Tax=delta proteobacterium MLMS-1 RepID=Q1NJA1_9DELT Length = 941 Score = 543 bits (1399), Expect = e-152, Method: Composition-based stats. Identities = 120/484 (24%), Positives = 195/484 (40%), Gaps = 23/484 (4%) Query: 276 ISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPV 335 + H P+Y V I + T ++ + I RLA+ DP+ Sbjct: 449 VHTHYTAAGEPLYVETKAYPLERDDLGTVRRAIEVVTDI--TDKKNREQEIHRLAFYDPL 506 Query: 336 VHLPNVRALNRAL--------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWL 387 LPN R L R A+ +L + + L G + + L Sbjct: 507 TRLPNRRLFFDRLEQAFSASARSGQHGAVLFLDLDNFKTLNDTRGHDVGDLLLTMAAERL 566 Query: 388 SPLLEPGEDVYQLSGNDLALRLNTESHQE--------RITALDSHLKQFRFFWDGMPMQP 439 + + + + G++ + LN S + R+ F DG Sbjct: 567 QEAVRANDTISRQGGDEFMVLLNNLSPERHAAISQAGRVAEKIRAALDQPFDLDGYEHHI 626 Query: 440 QIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNR 499 + + L + A + +A N R +Q EL+ A++ Sbjct: 627 GVSIGLSLFLGHDTPADELFKRAD--AAMYQAKHAGRNQVRFFDPEMQAELEQASALVVD 684 Query: 500 LQQALEHNHFFLMAQPITGMRGDV-YHEILLRMKGENDELISPDSFLPVAHEFGLSSSID 558 L+QA+ F L QP T G + E LLR + +SP F+P+A E L +I Sbjct: 685 LRQAIWQGQFQLHYQPQTANDGRIIGAEALLRWRHPERGPVSPMQFIPLAEESNLILAIG 744 Query: 559 MWVIEHTLQFMAENRA--KMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFE 616 WV+E +A + A+N+S Q F E+ ++LA + L E Sbjct: 745 RWVLEEACGQLAAWADLPAAGNCKLAVNVSARQFRQPEFVAEIRRILAATGADPKLLKLE 804 Query: 617 VTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNI 676 +TES +T + +Q L++LG ++DDFGTGY+S A+LK + + LKID +F+R++ Sbjct: 805 LTESIVMTELADTVSKMQELRDLGIGFSMDDFGTGYSSLAQLKRLPLEQLKIDRAFVRDL 864 Query: 677 VSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDT 736 S+ D IV +I + R + V+AE VE +E + G D QGYL +P P Sbjct: 865 GSDPHDDAIVETIIAMGRTLDIQVIAEGVETKEQLATLARYGCDAYQGYLFSRPVPAAQF 924 Query: 737 LNEI 740 + + Sbjct: 925 AHLL 928 >UniRef50_C7RVM5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RVM5_9PROT Length = 708 Score = 543 bits (1399), Expect = e-152, Method: Composition-based stats. Identities = 127/515 (24%), Positives = 215/515 (41%), Gaps = 37/515 (7%) Query: 255 MWGAMRYGYKLISLLWAVVL-----MISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIV 309 + + R+ +W ++ I + + IY T I +S + ++ Sbjct: 199 VLKSGRHDDPFYQRMWNSLVEKGYWQGEIWNKRKSGQIYAELLTITAIVASGGITTHYVA 258 Query: 310 NYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL--------RDAPWSALCYLRI 361 ++ + T + I RLAY D + LPN R L L R + AL ++ + Sbjct: 259 SFSDI--TEDKQAEAEIHRLAYYDALTRLPNRRLLQDRLGQALAAAARHGLYGALFFIGL 316 Query: 362 PGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTES-HQERITA 420 + L G + +++ L + G+ V +L G++ L L+ S + + A Sbjct: 317 DNFKTLNDTRGHDVGDLLLVEVAQCLRAQVREGDTVARLGGDEFVLLLDGVSGNADEAAA 376 Query: 421 LDSHL---------KQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIV 471 + + + F + IGVS V EL A+L++ Sbjct: 377 VAKEVGDKLREATSRPFSLDGQEYRCKLSIGVSLFAALDTVE-------ELFKRADLALY 429 Query: 472 --TNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDV-YHEIL 528 NA + R +Q + + A+ + L QAL + L QP G V E L Sbjct: 430 QAKNAGRDRLRFFDPAMQAAMDLRGALESDLHQALALDQLRLHYQPQIDTAGRVIGVEAL 489 Query: 529 LRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAK--MPAHRFAINLS 586 LR L+SP+ F+P+A GL I W++E + + + + + A+N+S Sbjct: 490 LRWWHPQRGLVSPNEFVPLAESTGLILPIGRWILETSCVLIKNWESDACTRSLQVAVNVS 549 Query: 587 PTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAID 646 QA F +V + L +L E+TES L NV+ + ++ LG ++D Sbjct: 550 ARQFRQADFVEQVKRSLKASGANPARLKLELTESVLLKNVEDTIAKMLAIKRLGVAFSLD 609 Query: 647 DFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVE 706 DFGTGY+S + L + D LKID SF+R + + I +I + R M V+AE VE Sbjct: 610 DFGTGYSSLSYLAQLPLDQLKIDQSFVRKLPGARKEETIARTIITMGRELDMNVIAEGVE 669 Query: 707 NEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIE 741 +E R+ + + G QGYL +P P+ ++ Sbjct: 670 SEAQRQFLEAHGCHAFQGYLFSRPLPVEHLTVFLQ 704 >UniRef50_C0ZBT5 Probable signaling protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBT5_BREBN Length = 815 Score = 542 bits (1398), Expect = e-152, Method: Composition-based stats. Identities = 119/496 (23%), Positives = 210/496 (42%), Gaps = 34/496 (6%) Query: 261 YGYKLISLLWAVVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQR 320 + L +S + Y YI + P + + + + + + T ++ Sbjct: 328 FRRAFAGESVTFELKLSGNDY--YITLSP--------IEENGEIVEMVGSMIDI--TERK 375 Query: 321 AVVRRIQRLAYVDPVVHLPNVRALNRALRDAPWSA--------LCYLRIPGMEMLVKNYG 372 I+ +A+ D + +LPN + L +A A + ++ + + + G Sbjct: 376 KAEETIRYMAHYDSLTNLPNRTLFHEKLAEAMLKAKQKDEKIGVMFIDLDRFKNINDTLG 435 Query: 373 IMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHL----KQF 428 + Q +++ L L + V +L G++ A+ L +H+E + + Sbjct: 436 HSIGDVLLQAVANRLICCLRKEDSVSRLGGDEFAIFLTGVTHREAGEIAQRIITSMSESI 495 Query: 429 RFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQR 488 + + P IG+S + I LL + A + + +N + + L + Sbjct: 496 TLDHIEIFITPSIGISM--YPDDGDDIEALLKHAD--AAMYLAKEQGKNNYQFFSEELHQ 551 Query: 489 ELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLP 546 L K+ + L++AL+ F L QP ++ + E L+R + LI P F+P Sbjct: 552 VLAKKLQLERELRKALDEKQFTLHYQPKIHLQTGQIIGMEALIRWDHPDLGLIPPIQFIP 611 Query: 547 VAHEFGLSSSIDMWVIEHTLQF-MAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAK 605 +A E GL + WV+ Q A A A+N+S Q ++ +L + Sbjct: 612 IAEETGLIVPLGEWVMRTACQQTKAWQEAGFTQLAVAVNISLRQFMQNNLIEMITSILEE 671 Query: 606 YQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADL 665 + L E+TES AL NV L L+ LG I+IDDFGTGY+S + L D Sbjct: 672 TGLAPQYLELEITESMAL-NVDYTIRILNRLKALGVSISIDDFGTGYSSLSYLSQFPIDR 730 Query: 666 LKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGY 725 LKID SF+RN+ N + I+ +I H+A K+ V+AE VE E + + + +QGY Sbjct: 731 LKIDQSFLRNL--NPQNQAIIKTIIHMAHNMKIAVIAEGVETHEHVDFLKEQLCNEVQGY 788 Query: 726 LIGKPQPLIDTLNEIE 741 KP P + + ++ Sbjct: 789 FYSKPLPTKEIDSFLQ 804 >UniRef50_Q2RPL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RPL3_RHORT Length = 855 Score = 542 bits (1398), Expect = e-152, Method: Composition-based stats. Identities = 130/590 (22%), Positives = 242/590 (41%), Gaps = 42/590 (7%) Query: 188 RVVRNPFYLRSYYSQLKQQVDAKVTKKEFALWLLALGALLLLLCMPLNEKSTIFSTNYTL 247 R VR P YY + + A+ +E L + + + L T+ + N Sbjct: 258 RCVRGPDNEVLYYEGTVEDITAQRQSQETMRLLGKVFTSIAEGIVLLERDLTVRTVNPAF 317 Query: 248 SLLL----------PLMMWGAMRYGYKLISLLWAVVLMISIHSYQ-----NYIPIYPGYT 292 + P ++ + + ++ + A V + + P Y G Sbjct: 318 EAMTGLLRQDMEGRPARLFASGLHENDFLATVAAEVDRAGLWRGEIWGERREGPPYSGEM 377 Query: 293 TQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNV--------RAL 344 T + + + ++ + T+++ I+ A D + HLPN +A+ Sbjct: 378 TVTAVRTRAGETTHYVAAITDI--TKRKRDEEHIRFQANFDMLTHLPNRHLIMDRLEQAM 435 Query: 345 NRALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGND 404 ++A R + +L + + + +YG + + + L + + V +L G++ Sbjct: 436 HQAQRTGRQVCVMFLDLDRFKQINDSYGHSAGDEVLKLTARRLRNCVRISDSVGRLGGDE 495 Query: 405 LALRLNTESHQERITALDSHL-----KQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLL 459 + L+ Q + + + F + P +G++Y Sbjct: 496 FIVILSNVEDQHAGAYIAEKILYSLSEPFPIGGTEVFCIPSVGITYFPDHGET------A 549 Query: 460 GELNTVAELSIVTNAPENMQRRGAMY---LQRELKDKVAMMNRLQQALEHNHFFLMAQPI 516 +L A++++ +A + +RR A++ + R + M + L+ AL + F L QP Sbjct: 550 PDLLRNADVAMY-HAKQGGERRYAIFTPDMARRSLALLTMESDLRHALARDEFELHFQPK 608 Query: 517 TGMR-GDVYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTL-QFMAENRA 574 + E L+R + LI+P F+P+A E GL I W + + M+ Sbjct: 609 VRADLTLIGAEALIRWRHPEKGLINPGDFIPLAEESGLILPIGRWTLREACDRVMSWRAE 668 Query: 575 KMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQ 634 + ++N+SP V Q+L + +E L E+TE+ +V+ A TL+ Sbjct: 669 GLTIPSVSVNVSPRQFQDQTLVETVRQILVETGLEPEALDLEITETVMTGDVEHAVGTLR 728 Query: 635 HLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLAR 694 L++LG ++IDDFGTGY+S LK D LKID +F+R+++ + D IV++I LAR Sbjct: 729 ALKDLGVTLSIDDFGTGYSSLNYLKTFPIDTLKIDQTFVRDVLHSGKDAAIVSTIIALAR 788 Query: 695 MKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIR 744 VVAE VE E E + S QG+L +P P + + + Sbjct: 789 NLGFSVVAEGVEEIEQAEFLGSRDCQNFQGFLYSRPLPPAEFTTFLRTAK 838 >UniRef50_C5UZT1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5UZT1_9PROT Length = 1301 Score = 542 bits (1397), Expect = e-152, Method: Composition-based stats. Identities = 125/524 (23%), Positives = 212/524 (40%), Gaps = 32/524 (6%) Query: 232 MPLNEKSTIFSTNYTLSLLLPL--MMWGAMRYGYKLISLLWAVVLMISIH-----SYQNY 284 + + + +T YTL ++ + + + + + +W + + + + Sbjct: 770 IEYANDAFVKTTGYTLPEVMGKNPRILHSGKTTVETYAAMWTQLNSGQMWRGELINRRKD 829 Query: 285 IPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRAL 344 Y + + V +++ + T Q+ V RI++LA+ D + LPN L Sbjct: 830 GTEYVELARISPLRHTDGRVTNYLSIKEDI--TEQKQVEARIRQLAHFDLLTGLPNQTLL 887 Query: 345 NR--------ALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGED 396 A R A A+ +L I + + G + + L+ + LL + Sbjct: 888 KDRAGFAMQMAQRSAHHLAVLFLDIDHFKNINDTLGHRIGDELLVHLAKRMKLLLRDEDT 947 Query: 397 VYQLSGNDLALRLNTESHQERITALDSHLKQFR----FFWDGMPMQPQIGVSYCYVRSPV 452 + + G++ L L + L+ + + P IG++ Sbjct: 948 LSRFGGDEFILVLPDTDADGAAHVAEKILETVAKTCYIEQHELVVTPSIGIAMYPSDG-- 1005 Query: 453 NHIYLLLGELNTVAELSIVTNA--PENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFF 510 + +L A++++ N R +Q ++ + N L+QAL N F Sbjct: 1006 ----MDFDKLYQSADVAMYRAKQDGRNNFRFFTSEMQARSARRLLLENALRQALSRNQFE 1061 Query: 511 LMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQF 568 L QP M+ V E LLR ISP F+PVA E GL SI WV+ +Q Sbjct: 1062 LHYQPQISMQDGKIVGAEALLRWYHPELGSISPAEFIPVAEESGLILSIGEWVLRTAVQQ 1121 Query: 569 MAENR-AKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVK 627 + + A P AINLS QAR V Q+L + + + E+TES A+ N Sbjct: 1122 VKRWQDAGHPPVTVAINLSAVQFRQARLSELVMQILHEANLAPHWIELELTESVAMDNPL 1181 Query: 628 QAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVA 687 A + L G +++IDDFGTGY+S + L+ + LKID SF+R++ + IV Sbjct: 1182 VAIGVMNDLHGCGIRMSIDDFGTGYSSLSYLRKFKVNKLKIDQSFVRDLADDIESRAIVT 1241 Query: 688 SICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQ 731 +I LA +AE VE + G + +QGY +P Sbjct: 1242 AIITLASSMGFQTIAEGVETAGQLAFLRLQGCNEVQGYYFSRPL 1285 >UniRef50_Q1H367 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H367_METFK Length = 1070 Score = 542 bits (1397), Expect = e-152, Method: Composition-based stats. Identities = 113/483 (23%), Positives = 207/483 (42%), Gaps = 22/483 (4%) Query: 275 MISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDP 334 M + + + YP + + T+ + + +++V + ++++ R+Q LA D Sbjct: 567 MGELLAQKRSGEYYPAWVSISTVHDNHGSLQNYVVVLTDI--SQRKQAEERLQFLATHDG 624 Query: 335 VVHLPNVRALN--------RALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHW 386 + LPN L RA R + ++ + +++ G Q+++ Sbjct: 625 LTGLPNRTLLQERMELAVLRAQRYQQCVGVLFIDLDRFKIINDTLGHQAGDVLLQEVAGR 684 Query: 387 LSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHL-----KQFRFFWDGMPMQPQI 441 L L + + + G++ + + Q+ + + + + F + + I Sbjct: 685 LGECLRQTDTIARQGGDEFVVLVEDFIEQQYLVNVARKIMHALAQPFILMQQELYISASI 744 Query: 442 GVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQ 501 G+S Y V+ LL N + + +N + ++ + N L+ Sbjct: 745 GIS-VYPDDGVDISSLLK---NADMAMYRAKDDGKNTFHFYSADGNANSVSRLTLENSLR 800 Query: 502 QALEHNHFFLMAQPITGM--RGDVYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDM 559 +ALE N F L+ Q + + + E L+R ++SP F+PVA E G+ I Sbjct: 801 RALERNEFSLLYQAKLDLAEQNIIGAEALIRWHSAELGMVSPQDFIPVAEETGMIIEIGE 860 Query: 560 WVIEHTLQFMAENRA-KMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVT 618 WV++ + + R +N+S + +S L + + L E+T Sbjct: 861 WVLQQACRDACHWQEVAGRPIRVGVNISARQFREDSLYQAISNALEESGLTPNCLELEIT 920 Query: 619 ESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVS 678 ES + N ++A LQH + LG + IDDFGTGY+S LK+ D LKID SF+R+I Sbjct: 921 ESMIMQNAERASQMLQHFRNLGSYVLIDDFGTGYSSLGYLKHFPIDSLKIDRSFVRDIPQ 980 Query: 679 NSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLN 738 +S D I +I +A K+ VVAE VE + E + G D +QGY+ +P + D + Sbjct: 981 DSDDMAITQAIIAMAHSLKINVVAEGVETQAQLEFLRGQGCDQLQGYIFSRPLVVEDFVG 1040 Query: 739 EIE 741 + Sbjct: 1041 LLR 1043 >UniRef50_A0KIJ4 MorA n=2 Tax=Aeromonas RepID=A0KIJ4_AERHH Length = 838 Score = 542 bits (1396), Expect = e-152, Method: Composition-based stats. Identities = 116/488 (23%), Positives = 201/488 (41%), Gaps = 23/488 (4%) Query: 278 IHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVH 337 YP + + + F++ + + + ++ RRIQ LAY D + Sbjct: 340 TQRLHADGYPYPQWEIVTPVQDDRGEISHFVICFEDI--SERKEAERRIQDLAYYDELTG 397 Query: 338 LPNVRALNRAL--------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSP 389 LPN R L+ L RD AL ++ + + + + G ++++ L Sbjct: 398 LPNRRQLHETLAHAFGEASRDYLIGALLFIDLDHFKTINDSLGHATGDWLLKEVASRLKR 457 Query: 390 LLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLKQFRFFWD--------GMPMQPQI 441 L+ G+ + +L G++ L L + S + + L R + G + Sbjct: 458 LVRQGDCLARLGGDEFVLLLPSLSASPPQAEMQADLIAERLISEIAAPYNHAGQVLHIGA 517 Query: 442 GVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQ 501 V + LL + +T + +A +R +Q + ++ + N L+ Sbjct: 518 SVGITLFPGREQGVDDLLKQADTA--MYQAKSAGRKTRRFFDASMQLQADRRLLIHNELR 575 Query: 502 QALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDM 559 AL L QP + G + E L+R + L+SP F+P+A E L I Sbjct: 576 SALNQQELTLYYQPQHMVEGGDIIGVEALIRWQPPGRALVSPAEFIPIAEETDLIVDIGN 635 Query: 560 WVIEHTLQFMAENRAKMPAH-RFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVT 618 WV+ + ++N+S F + +LA ++ L E+T Sbjct: 636 WVLYEACAQYVRWEENGIHIPQLSVNVSAKQFHATDFVDRIHDVLASTGMDPASLNLEIT 695 Query: 619 ESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVS 678 ES L + + + L+ LG AIDDFG GY+S + LK + AD LKID SFI++I Sbjct: 696 ESVVLGHAEDTISKMSELKALGISFAIDDFGAGYSSLSYLKRLPADELKIDRSFIQDIPR 755 Query: 679 NSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLN 738 + + IV ++ +AR V AE VE+ + E + + G + QGYL KP P+ Sbjct: 756 DGDNMAIVEAVIAMARHMGFNVTAEGVESRQQLEFLQAQGCHFYQGYLASKPLPVPYLER 815 Query: 739 EIEPIRES 746 ++ + S Sbjct: 816 YVQRLARS 823 >UniRef50_Q47ES6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Bacteria RepID=Q47ES6_DECAR Length = 832 Score = 541 bits (1395), Expect = e-152, Method: Composition-based stats. Identities = 116/489 (23%), Positives = 198/489 (40%), Gaps = 31/489 (6%) Query: 283 NYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVR 342 I+ + + + + F T ++ I RLA+ D + HLPN R Sbjct: 342 GQTRIFNNVVAPIKVDGQTIGIVGF-----NQDITDRKRNEEEIHRLAFYDSLTHLPNRR 396 Query: 343 ALNRALRDA--------PWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPG 394 + L A AL + + + L +G + + +++ L + G Sbjct: 397 LMFDRLEHALIGSARRKSHGALLLIDLDNFKFLNDTHGHEVGDELLLEVAKRLKTCIRQG 456 Query: 395 EDVYQLSGNDLALRLNTES-------HQERITALDSHLKQFRFFWDGMPMQPQI------ 441 + +L G++ + L E I F P + I Sbjct: 457 DTAARLGGDEFVVILEDIDGAGNGTIQAELIAGHIQAQLNHPFSLVRPPERLSIDYRCAS 516 Query: 442 GVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQ 501 + + LL +T + A N R +Q + + A+ L+ Sbjct: 517 SIGIALFDDTMVTAKELLRRADTA--MYQAKAAGRNTLRFFDPEMQAAVTHRAALETELR 574 Query: 502 QALEHNHFFLMAQPITGMRGD-VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMW 560 +A++ F L Q G E LLR + I P SF+P+A E GL I W Sbjct: 575 KAIDEQQFHLCFQVQMDQSGRPTGGEALLRWEHPTRGTIPPASFIPLAEETGLIVPIGQW 634 Query: 561 VIEHTLQFMAENRAK--MPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVT 618 V+ + +A + A+N+S QARF ++ LL + A +L E+T Sbjct: 635 VLATACRQLAAWSQQPETSGLTLAVNVSARQFRQARFTDQLRDLLLQTGAPATRLKLELT 694 Query: 619 ESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVS 678 ES L + + + L++LG + ++DDFGTGY+S A LK + + LKID SF+R++++ Sbjct: 695 ESMMLEDTEAIIGRMAELKQLGIRFSLDDFGTGYSSLAYLKRLPLNQLKIDQSFVRDVLT 754 Query: 679 NSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLN 738 + D I +I L + + V+AE VE + + ++G QGYL G+P PL++ Sbjct: 755 DPNDAAIAETIVALGNILGLEVIAEGVETDAQWRFLANVGCKNYQGYLFGRPLPLLEFEQ 814 Query: 739 EIEPIRESA 747 ++ A Sbjct: 815 FLQGCDAGA 823 >UniRef50_A6SVJ0 Uncharacterized conserved protein n=4 Tax=Proteobacteria RepID=A6SVJ0_JANMA Length = 956 Score = 541 bits (1395), Expect = e-152, Method: Composition-based stats. Identities = 108/472 (22%), Positives = 189/472 (40%), Gaps = 26/472 (5%) Query: 278 IHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVH 337 + +Y+ ++ + + V F+V + AT + ++ D + Sbjct: 469 LRNYRKDGALFWSDLYIAPVKDDTGEVSHFVVALYDITAT--KRYESELEFQTNRDALTG 526 Query: 338 LPNVRALNRALRDAPWSA--------LCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSP 389 L N L L A A + ++ + + + G + ++ L Sbjct: 527 LANRSLLRDRLSQAISYAHRYNHPIWIAFVDLDRFKFVNDTLGHQAGDLLLKAIAERLQH 586 Query: 390 LLEPGEDVYQLSGNDLALRLNTESHQERITALDSHL-----KQFRFFWDGMPMQPQIGVS 444 + + V ++ G++ L L T + + + + IGV+ Sbjct: 587 AVRDTDTVSRMGGDEFVLILPERVDAGLSTGIVQRIMDGIAQPLTIEGHEFFISSSIGVA 646 Query: 445 YCYVRSPVNHIYLLLGELNTVAELSIVTNA--PENMQRRGAMYLQRELKDKVAMMNRLQQ 502 + EL A++++ N + + +++ + L+ Sbjct: 647 VYPNDG------VTPEELIKHADIAMYRAKETGRNNFQFYTSSMNERALERLRLEGDLRN 700 Query: 503 ALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMW 560 A+E F L QP +R V E L+R + +I P F+ +A E GL I W Sbjct: 701 AMERGEFILHYQPQLDLRTGKIVGVEALIRWQHPELGMIPPMRFIGLAEETGLIVPIGAW 760 Query: 561 VIEHTLQFMA-ENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTE 619 VI + + + R ++NLS Q ++ L + Q+ L E+TE Sbjct: 761 VIREACRQNKVWQEHGLGSLRMSVNLSARQFAQQDLLESIALALEETQLPPQCLEIELTE 820 Query: 620 SNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSN 679 S + +V A L+ L+ LG Q++IDDFGTGY+S + LK D+LKID SF+ +I ++ Sbjct: 821 SLVMADVDHAIGILRELKALGVQLSIDDFGTGYSSLSYLKRFPIDVLKIDRSFVNDITTD 880 Query: 680 SLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQ 731 D IVASI LA ++ V+AE VE EE + D +QGY +P Sbjct: 881 PDDAAIVASIISLAHSLRLTVIAEGVETEEQLAYLQQHDCDQIQGYFFSRPI 932 >UniRef50_C5V0L7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V0L7_9PROT Length = 951 Score = 541 bits (1394), Expect = e-152, Method: Composition-based stats. Identities = 126/515 (24%), Positives = 223/515 (43%), Gaps = 37/515 (7%) Query: 254 MMWGAMRYGYKLISLLWAVVLMIS-----IHSYQNYIPIYPGYTTQLTITSSSYLVFSFI 308 + G+ R+ +W V+ + + + IYP + T + + + ++ Sbjct: 428 RLLGSGRHNQDFYKSMWEVLNRVGSWSGELWDRRKNGEIYPKWLTITAVKNRD-EISHYV 486 Query: 309 VNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNR--------ALRDAPWSALCYLR 360 ++ + T ++ I LA+ DP+ LPN R L + R + AL ++ Sbjct: 487 GVFVDI--TERKKAEEEIHNLAFFDPLTQLPNRRLLLDRMRLALGLSARSKNFGALMFID 544 Query: 361 IPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITA 420 + ++L G + ++SH L+ L + V + G++ + L + S + I Sbjct: 545 LDHFKVLNDTKGHEYGDKMLIEVSHRLTQSLRDTDSVARFGGDEFVVLLESLSVNQDIAV 604 Query: 421 LD--SHLKQFRFFWDGMPM--------QPQIGVSYCYVRSPVNHIYLLLGELNTVAELSI 470 S ++ R + P IGV N + + EL A+L++ Sbjct: 605 AQAGSIAEKMRESLSQTYIIESYAHESTPSIGVVLF------NGDAIEIDELLKRADLAM 658 Query: 471 VTNA--PENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDV-YHEI 527 N R +Q L+ + M L+QAL ++ F L Q T ++ E+ Sbjct: 659 YQAKESGRNTVRFFESAMQATLESRTLMERALRQALSNSEFELYYQVQTNQANELLGAEV 718 Query: 528 LLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAK--MPAHRFAINL 585 LLR ++ ISP F+P+A + L I WV+E+ + + R A+N+ Sbjct: 719 LLRWHSQSLGPISPAQFIPLAEQTKLILPIGEWVLENACARLKAWETHPTLSKLRLAVNI 778 Query: 586 SPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAI 645 SP Q F +V L + +L E+TE+ L +V +A + L+ LG + ++ Sbjct: 779 SPVQFHQPDFVRQVQAALTDSGVNPRRLELELTENLVLEDVDEAIQKMSALKALGVRFSM 838 Query: 646 DDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYV 705 DDFGTGY+S +K + D LKID SF+R+I+++ D +V +I +AR V+AE V Sbjct: 839 DDFGTGYSSLQYIKRLPIDQLKIDQSFVRDILTDPGDAMMVQTIAGMARNFGYEVIAEGV 898 Query: 706 ENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEI 740 E ++ G + QGY +P L + + I Sbjct: 899 EEHAQLLPLIERGCNTFQGYFFSRPVALAEFEHLI 933 >UniRef50_C6WVK9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WVK9_METML Length = 1329 Score = 541 bits (1394), Expect = e-152, Method: Composition-based stats. Identities = 122/506 (24%), Positives = 216/506 (42%), Gaps = 26/506 (5%) Query: 255 MWGAMRYGYKLISLLWAVVLMISIH-----SYQNYIPIYPGYTTQLTITSSSYLVFSFIV 309 M + + S +W + ++ + + IY + + TI + + I Sbjct: 827 MLASEKLEESFYSAMWDSIGVMGYWQGEVINQRKNGEIYTQWLSISTIKDADGKISQHIG 886 Query: 310 NYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRDAPWSA--------LCYLRI 361 + + ++ RIQ L+ DP+ +LPN LN + A +A L ++ + Sbjct: 887 IISDI--SERKVAEERIQFLSNFDPLTNLPNKNLLNDRTKLALATAKRLKTAVTLMFVDL 944 Query: 362 PGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITAL 421 + + ++ G + Q ++L+ + P + V + G++ L L + Sbjct: 945 DRFKFINESLGPSIGDQVVKELAERFVAYMRPEDTVCRQGGDEFILLLPNTDAEGAAHVA 1004 Query: 422 DSHL----KQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPEN 477 L + F F + + IG+S P + + A L N Sbjct: 1005 KKLLDIVAQPFNFHGQKIVLTASIGISA----YPQDGESFEQLAQSADAALYRAKYEGRN 1060 Query: 478 MQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGEN 535 + A + + D + + + L+ A+EH F L QP + + E L+R + Sbjct: 1061 NFQFFARQMHEQAHDILLLESELRSAIEHEEFLLYYQPQYDSKTSKIIGLEALIRWQHPE 1120 Query: 536 DELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENR-AKMPAHRFAINLSPTSVCQAR 594 L+SP F+P+A E GL + I WV+ ++ +A + A + A A+NLS Q Sbjct: 1121 KGLVSPAVFIPIAEESGLIAEIGDWVLRTAVKQLASWQEAGLGAVPVAVNLSVVQFHQDT 1180 Query: 595 FPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYAS 654 V Q+L +++ L E+TE A+ + ++ L L LG +++IDDFGTGY+S Sbjct: 1181 LYGSVCQILRDTKVDPSMLELELTEGIAMEDSERTLNVLNQLNSLGVRLSIDDFGTGYSS 1240 Query: 655 YARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAV 714 + LK D LKID SF+R I S+ D I+ +I +A+ +AE VE E + Sbjct: 1241 LSYLKKFKIDKLKIDQSFVRGIGSHPQDAAIITAIISMAKSLSFKTIAEGVETLEQLNFL 1300 Query: 715 LSLGIDYMQGYLIGKPQPLIDTLNEI 740 ++ D +QGY KP P + + Sbjct: 1301 IANSCDEIQGYYFSKPLPSTEVTKLL 1326 >UniRef50_Q1K2Z8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K2Z8_DESAC Length = 1288 Score = 540 bits (1393), Expect = e-152, Method: Composition-based stats. Identities = 113/504 (22%), Positives = 207/504 (41%), Gaps = 25/504 (4%) Query: 254 MMWGAMRYGYKLISLLWAVVLMIS-----IHSYQNYIPIYPGYTTQLTITSSSYLVFSFI 308 + + R+G +W + I + + +YP + + V +I Sbjct: 779 RILKSNRHGRDFYQNMWHCLAEHGCWQGEIWNRRKDGQVYPELMSMSAVCDDQQEVSHYI 838 Query: 309 VNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNV--------RALNRALRDAPWSALCYLR 360 + + ++ + ++ L++ DP+ LPN +A+ A R A+ Sbjct: 839 AVFTDI--SQAKESQEKLDYLSWHDPLTDLPNRSLFCTHLDQAVKHAERKHHSFAVLCFD 896 Query: 361 IPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITA 420 + + + ++G ++ +K++ L L + + +L G++ L L + R+T Sbjct: 897 LDHFKDVNDSFGHLVGDALLRKIADRLRSCLRESDMLARLGGDEFVLLLEDVADSHRVTM 956 Query: 421 LDSHL-----KQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAP 475 + + + + +Q + V LL ++ L Sbjct: 957 MAEEILHQLQQPICLTETDLEVQVSVSVGIAVYPEHGRDALELLQRADSA--LYRAKQHG 1014 Query: 476 ENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKG 533 + + +++V + L+QALE F + QP + V E L+R Sbjct: 1015 RARFAYYNEEMTEQAQERVQLSFHLRQALEKKEFAVYYQPQVDLGTGQIVGAEALMRWNS 1074 Query: 534 ENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQF-MAENRAKMPAHRFAINLSPTSVCQ 592 L++PD F+P+A E G S+ W++ + A A P A+NLS + Sbjct: 1075 PELGLVTPDRFIPLAEEIGCICSMGTWILRQVCEQGKAWLDAGYPPLTLAVNLSAVQFAE 1134 Query: 593 ARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGY 652 + + L + A L EVTES + +Q L+ L ELG ++A+DDFGTGY Sbjct: 1135 EDIACRLKETLQETGYPAEYLELEVTESTLMHKEQQTIDLLKSLNELGVRLALDDFGTGY 1194 Query: 653 ASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIRE 712 +S A LK LLK+D SFI ++ +++ D ++V +I + ++AE VE R+ Sbjct: 1195 SSLAYLKYFPLHLLKVDKSFIDDLPADANDCKMVTAIVQMGHGLGFDLLAEGVETVAQRD 1254 Query: 713 AVLSLGIDYMQGYLIGKPQPLIDT 736 + LG DY QGY P P + Sbjct: 1255 CLAQLGCDYYQGYYCSPPVPACEF 1278 >UniRef50_B8GMU1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GMU1_THISH Length = 862 Score = 540 bits (1393), Expect = e-152, Method: Composition-based stats. Identities = 110/446 (24%), Positives = 191/446 (42%), Gaps = 20/446 (4%) Query: 312 MAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRDA--------PWSALCYLRIPG 363 A T + R++ LA DPV LPN L+ A AL +L + Sbjct: 421 TAQDITERHDYQNRLRHLANFDPVTGLPNRTLFKDRLQHALANATRNQRLVALLFLDMDQ 480 Query: 364 MEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDS 423 + + + G M+ + ++ + L + G+ V + G++ + L H E+ + Sbjct: 481 FKNVNDSLGHMMGDELLRQTAERLLGCVREGDTVARFGGDEFIILLENIEHSEQASLSAE 540 Query: 424 HL-----KQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENM 478 + + FR IG+S H L+ ++ + + Sbjct: 541 RVVQAMRRPFRLGEHEHFCNVSIGISL--YPEDDEHPEDLVRHADSA--MYLAKAQGGAG 596 Query: 479 QRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGEND 536 R + +++ + N+L QALE F + QP +R E L+R + Sbjct: 597 YRFYTPDMNTRAMERLLLQNQLHQALELGQFQVHYQPQMDLRSGRICGVEALVRWQHPER 656 Query: 537 ELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMA-ENRAKMPAHRFAINLSPTSVCQARF 595 L+ P F+P+A + GL + WV+ + + +PA ++NLSP Sbjct: 657 GLVPPAEFIPMAEDTGLIEPLGEWVLRTAAREVRGWQDRGLPALNLSVNLSPRQFRHPDL 716 Query: 596 PVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASY 655 P V ++LA+ +EA +L E+TE + +++ TL + LG +++IDDFGTG++S Sbjct: 717 PGMVERVLAESGLEAERLELEITERLIIVDLEHTVDTLSRIARLGVRVSIDDFGTGHSSL 776 Query: 656 ARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVL 715 A LK + LKID F+ I +S D I ++ L R ++ V+AE VE E + Sbjct: 777 AYLKRLPVHALKIDREFVDGIGQDSDDAAIAEAVIALGRTLRLQVIAEGVETREQASFLR 836 Query: 716 SLGIDYMQGYLIGKPQPLIDTLNEIE 741 G D +QG+ I +P P + + Sbjct: 837 EHGCDAVQGFFIARPMPAGELTGWLS 862 >UniRef50_Q47IR9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47IR9_DECAR Length = 952 Score = 540 bits (1393), Expect = e-152, Method: Composition-based stats. Identities = 119/507 (23%), Positives = 216/507 (42%), Gaps = 28/507 (5%) Query: 254 MMWGAMRYGYKLISLLW-----AVVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFI 308 + + R+ +W + V I + IYP + T + S V +I Sbjct: 443 RILRSGRHDPAFYQKMWESIRSSGVWQGEIWDRRKDGSIYPKWLTISAVLGDSGEVTHYI 502 Query: 309 VNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRD--------APWSALCYLR 360 + V + ++ RI +LAY D V LPN L L + + L ++ Sbjct: 503 GLHQDV--SERKLAESRIHQLAYYDQVTGLPNRILLQERLSQVMAKCRASSNYGVLLFVD 560 Query: 361 IPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQ----- 415 + + L G + +++ L + V +L G++ A+ ++ Sbjct: 561 LDNFKTLNDTLGHNVGDLLLKQVGEVLRRCSRESDTVARLGGDEFAVIMSELGTDPSAAM 620 Query: 416 -ERITALDSHLKQF--RFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVT 472 A L + F + + + + + I L+ +++ + Sbjct: 621 QGAEAAARYLLSELGRTFQLGNVIHRNTVSIGATLFKGEQESIESLMRQIDLA--IYQAK 678 Query: 473 NAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDV-YHEILLRM 531 A N R ++ L+++ A+ L+ A+E F L Q G G + E+LLR Sbjct: 679 GAGRNTVRFFDPSMEIALRERAAIEEALRYAIEEEQFLLHYQAQIGEDGRIEGAEVLLRW 738 Query: 532 KGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAK--MPAHRFAINLSPTS 589 + ++SP F+P+A E G + WV++ +A M A+N+S Sbjct: 739 QHPERGMVSPAIFIPLAEETGDIVLLGSWVLKQAAAQLARWAESPVMAGLVLAVNVSAVQ 798 Query: 590 VCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFG 649 + Q F +V+ +L + + +L E+TES + +V+ +Q L+ +G ++DDFG Sbjct: 799 LRQPDFVEQVTTVLREAGADPGRLKLELTESMLVNDVEATIAKMQSLKAIGIGFSLDDFG 858 Query: 650 TGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEE 709 TGY+S + LK + LKID SF+R+++ ++ D I +S+ LA+ + V+AE VE E Sbjct: 859 TGYSSLSYLKRLPLSQLKIDQSFVRDVLVDANDVAIASSVVALAKSLGLGVIAEGVETEA 918 Query: 710 IREAVLSLGIDYMQGYLIGKPQPLIDT 736 RE + +G QGYL +P P+ D Sbjct: 919 QRELLAGIGCHCYQGYLFSRPLPIGDF 945 >UniRef50_A4G4R7 Putative uncharacterized protein n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G4R7_HERAR Length = 859 Score = 540 bits (1393), Expect = e-152, Method: Composition-based stats. Identities = 119/497 (23%), Positives = 204/497 (41%), Gaps = 29/497 (5%) Query: 261 YGYKLISLLWAVVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQR 320 + + W + H+ + I + + + + ++ + T Q+ Sbjct: 369 WAHLGRGESWQGEFINRRHNGEERIDL----VRVSPVREADGRITHYLAIEEDI--TNQK 422 Query: 321 AVVRRIQRLAYVDPVVHLPNV--------RALNRALRDAPWSALCYLRIPGMEMLVKNYG 372 RI+ LA+ D + LPN RAL A D A+ +L + + + G Sbjct: 423 NAQARIESLAHFDVLTGLPNRALLDERAQRALRLAEEDQATLAVMFLDLDHFKNINDTLG 482 Query: 373 IMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNT---ESHQERITALDSHL-KQF 428 L +L+ L +L + + +L G++ L L ES ++ L + + + Sbjct: 483 HNLGDTLLVELAQRLRAVLRRDDTLSRLGGDEFVLLLPGANRESAKKIAQELMRAINEPY 542 Query: 429 RFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNA--PENMQRRGAMYL 486 R + + IG++ + L A++++ N R + Sbjct: 543 RIGSHELNVMASIGIAVYPADG------MDFETLCKNADVAMYRAKQEGRNAYRSFTQEM 596 Query: 487 QRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSF 544 Q + ++N L+QA+ + QP + + E LLR ISP F Sbjct: 597 QAYSTRYLQVLNALRQAIAQEQLHVHYQPQISLISGDVIGAEALLRWHHPELGNISPAEF 656 Query: 545 LPVAHEFGLSSSIDMWVIEHTLQFMA-ENRAKMPAHRFAINLSPTSVCQARFPVEVSQLL 603 +P+A E GL I WV+ + ++ + A+NLS A P V Q+L Sbjct: 657 IPIAEESGLILQIGEWVLRVAVAQAKKWHQLGLDKLIIAVNLSAVQFRHAGLPNLVMQIL 716 Query: 604 AKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNA 663 + L E+TE A+ + + A + L E G +++IDDFGTGY+S + LK A Sbjct: 717 KEEDFPPQYLELELTEGVAMHDPQGAIAMMNSLHERGVRMSIDDFGTGYSSLSYLKQFKA 776 Query: 664 DLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQ 723 LKID SF+R+I +++ D IV++I +A+ + +AE VE E + + G Q Sbjct: 777 YKLKIDQSFVRDISTDAEDKAIVSAIIGMAKNLGLQTIAEGVETAEQQAFLREEGCHEAQ 836 Query: 724 GYLIGKPQPLIDTLNEI 740 GY KP P D I Sbjct: 837 GYHYSKPLPAADFETFI 853 >UniRef50_C6NZD9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZD9_9PROT Length = 1149 Score = 540 bits (1393), Expect = e-152, Method: Composition-based stats. Identities = 106/498 (21%), Positives = 192/498 (38%), Gaps = 21/498 (4%) Query: 261 YGYKLISLLWAVVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQR 320 + + W L + + Y ++ V +++ + T +R Sbjct: 660 WAHLTRGEPWKGEL----FNRRKDGTEYIESVLISPVSQVDGRVMNYLAIKEDI--TEKR 713 Query: 321 AVVRRIQRLAYVDPVVHLPNVRALNR--------ALRDAPWSALCYLRIPGMEMLVKNYG 372 RI++L + D + LPN LN A R + +L + + + G Sbjct: 714 LTEERIEKLEHFDHLTGLPNRTQLNERFKYALSLAQRSGEQMTVMFLDLDHFKDINDTLG 773 Query: 373 IMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLKQFR--F 430 + Q ++ L L + V + G++ L L ++ F Sbjct: 774 HSIGDQLLMDVAKRLKETLRDEDTVSRQGGDEFILILPGTDENGAAHVAAKLMEAVSQAF 833 Query: 431 FWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQREL 490 ++ + + + L +T + V + N +Q Sbjct: 834 QFEQHELVATCSIGIAIYPHDGENFETLSKNADTA--MYRVKHDGRNGFCFFTSEMQAHS 891 Query: 491 KDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVA 548 + + N L+ AL L QP + V E LLR + ISP F+P+A Sbjct: 892 ARTLQLGNALRHALTRGQLHLHYQPQISTQDGHVVGAEALLRWQHPELGSISPAEFIPIA 951 Query: 549 HEFGLSSSIDMWVIEHTLQFMAEN-RAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQ 607 + G I WV+ ++ + + + +P A+NLS Q+ V+ +L + + Sbjct: 952 EDNGQIIPIGEWVLRTAIKQLKDWMDSGLPPMIMAVNLSAAQFRQSNLMELVTSILDESK 1011 Query: 608 IEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLK 667 + L E+TE+ A+ + + A + L G +++IDDFGTGY+S + LK LK Sbjct: 1012 VPHRYLELELTEAVAMDDPQLAIGVMDKLHTGGIKMSIDDFGTGYSSLSYLKRFKVYKLK 1071 Query: 668 IDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLI 727 ID SF+ +I + D IVA+I ++A M +AE VE + G + +QGY Sbjct: 1072 IDQSFVHDITDDPDDKAIVAAIINMASSLGMQTIAEGVETAGQLSFLRLQGCNEVQGYYF 1131 Query: 728 GKPQPLIDTLNEIEPIRE 745 KP P ++ ++ + Sbjct: 1132 SKPLPAEQFVSYLQKQGQ 1149 >UniRef50_A0L8P4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L8P4_MAGSM Length = 754 Score = 540 bits (1392), Expect = e-152, Method: Composition-based stats. Identities = 114/504 (22%), Positives = 208/504 (41%), Gaps = 23/504 (4%) Query: 256 WGAMRYGYKLISLLWAVVL-----MISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVN 310 + + R+ + +W + I + IYP T + + + V ++I Sbjct: 235 FKSDRHDATFYTNMWRKIAEEGFWQGEIWDRRKNGEIYPKRLTINAVRNQAGEVENYIGI 294 Query: 311 YMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL--------RDAPWSALCYLRIP 362 + + + +A +++RLAY D + LPN + L R A+ ++ + Sbjct: 295 FSDI--SESKATELKLERLAYYDALTQLPNRMLFHDRLEHEFYNAQRHRKQVAVFFIDLD 352 Query: 363 GMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALD 422 + + G + Q ++ L + + V ++ G++ + L S E + + Sbjct: 353 RFKQVNDTLGHSAGDELLQHVAQRLEGCVRAADTVARMGGDEFTVILADISDNESVARVA 412 Query: 423 SHLK---QFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQ 479 + Q G + + N + L + + + Sbjct: 413 RKVLEELQKSISIKGHDIFVGASIGIALYPDNGNDVETLTKNADMA--MYRAKESGRGNY 470 Query: 480 RRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDV--YHEILLRMKGENDE 537 + + + ++++ ++L A+ N + QP M+ + E L+R + Sbjct: 471 KFFSEEMNVSTSQRLSLESQLHHAVNANLLEVYYQPKLNMQSGIMVGMEALVRWPQADGS 530 Query: 538 LISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAEN-RAKMPAHRFAINLSPTSVCQARFP 596 +I P F+PVA E GL + V+ + A R R A+NLS Sbjct: 531 MIPPIQFIPVAEETGLIVPLGRLVMRQAMLDCARWVRETGMNLRVAVNLSAREFQSPGLV 590 Query: 597 VEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYA 656 VE+ Q LA+ ++A E+TES + +V+ A TL+ + LG IA+DDFGTGY+S + Sbjct: 591 VEIEQTLAECGLDARHFEVEITESLMMHDVENAIATLEQISRLGIHIAMDDFGTGYSSLS 650 Query: 657 RLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLS 716 LK LK+D SF+++I + D +IVA+I LA++ + VVAE VE +E + Sbjct: 651 YLKKFPIHSLKVDRSFVKDIPDDPNDIEIVAAILSLAKVLNLKVVAEGVETQEQLSFLRQ 710 Query: 717 LGIDYMQGYLIGKPQPLIDTLNEI 740 D QGY KP +D + Sbjct: 711 NLCDECQGYSFSKPLSAVDFTAFL 734 >UniRef50_A0LAF7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LAF7_MAGSM Length = 951 Score = 540 bits (1392), Expect = e-152, Method: Composition-based stats. Identities = 113/508 (22%), Positives = 215/508 (42%), Gaps = 23/508 (4%) Query: 258 AMRYGYKLISLLWAVVLM-----ISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYM 312 + R+ + +W ++ I + I+P + I + ++ F+ + Sbjct: 434 SGRHDASFYATMWKHLVGEGHWSGEIWDRRRNGEIFPKWLAISAIRNRQGVISHFVGVFN 493 Query: 313 AVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL--------RDAPWSALCYLRIPGM 364 + +RQ++ ++++RL + DP+ LPN L R +L + + Sbjct: 494 DI--SRQKSTEQQLERLVFYDPLTQLPNRVLFRDRLIHEVGVAERSNKLMSLLLVDLDRF 551 Query: 365 EMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSH 424 +++ G + + ++S L + + V +L G++ A+ L E + Sbjct: 552 KIINDTLGHGVGDELLLQVSKRLIASVRKSDTVARLGGDEFAIILPGMERAEDAAHVAET 611 Query: 425 L---KQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRR 481 + Q F + + + + L +N A + + + + Sbjct: 612 IINQLQVPFSIEENELFVGASIGIAVHGQDGDDYDSLT--MNADAAMFKAKESGKGTYKF 669 Query: 482 GAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELI 539 + + ++ M L++A+++ L QP V E L+R +I Sbjct: 670 FTPDMNIQNAKRLVMEAELRRAVDNQELMLHYQPKVDAESRQIVGMEALVRWVHPTRGVI 729 Query: 540 SPDSFLPVAHEFGLSSSIDMWVIEHTLQFMA-ENRAKMPAHRFAINLSPTSVCQARFPVE 598 P F+P+A E GL + V+ + +P + A+NLSP + + Sbjct: 730 PPGEFIPLAEETGLIVPLGELVLTRACAQVKQWWDMGLPQVQVAVNLSPRQFQEPNLIEK 789 Query: 599 VSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARL 658 VS++L K A L E+TES A+ +V T++ L++LG +I+IDDFGTGY+S + L Sbjct: 790 VSEILRKTGFPATGLELEITESIAMHDVDNTIETVKKLKDLGVRISIDDFGTGYSSLSYL 849 Query: 659 KNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLG 718 K LKID SF+R++ + I++SI +A+ + VVAE VE + E + Sbjct: 850 KKFPLHALKIDQSFVRDLGGDDDGASIISSIISMAKAMALGVVAEGVETAQQMEFLRGQE 909 Query: 719 IDYMQGYLIGKPQPLIDTLNEIEPIRES 746 +QG+ + KP P D L +E +E+ Sbjct: 910 CQQVQGFFLSKPLPPSDFLALLERQQET 937 >UniRef50_A8FYM5 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain-like protein n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8FYM5_SHESH Length = 1055 Score = 540 bits (1392), Expect = e-152, Method: Composition-based stats. Identities = 109/485 (22%), Positives = 194/485 (40%), Gaps = 21/485 (4%) Query: 276 ISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPV 335 + Y+ + + T + + + I + + T ++ I LA+ D + Sbjct: 569 CEVSGYRKNGEHFLSWQTVIPVKDENGDTQQIIYIFSDI--TERKLFEEHIYNLAHHDSL 626 Query: 336 VHLPNV--------RALNRALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWL 387 LPN AL RA R A+ ++ + +M+ G + Q+++ Sbjct: 627 TQLPNRVAFQLQMNTALERAKRSKTQMAVMFIDLDHFKMINDTSGHPVGDLLLQQVAERF 686 Query: 388 SPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHL-----KQFRFFWDGMPMQPQIG 442 L + + + G++ + L+ T + L + F+ + + IG Sbjct: 687 KRALRKEDVISRFGGDEFTVLLSNTRTDNATTVVARKLLACFYEPFKLPSSEVVISASIG 746 Query: 443 VSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQ 502 + ++ N + + N + + + ++++ + L++ Sbjct: 747 IGVFPDNGDSVDSLMM----NADSAMYRAKEKGRNCFQFYTKEMNQYAQERLELELDLRK 802 Query: 503 ALEHNHFFLMAQPITGMRGDV-YHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWV 561 ALE + F L QP G + E L+R + + L+SP F+ +A GL I WV Sbjct: 803 ALERDEFVLHYQPQFDPNGRIIGCEALIRWQHPDKGLLSPGEFINMAEITGLIVPIGKWV 862 Query: 562 IEHTL-QFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTES 620 I+ Q PA ++NLS V + I L E+TES Sbjct: 863 IDTACMQHKMWLSQGYPALNISVNLSGRQFLHHDLLETVKNAITTSGITPSCLELELTES 922 Query: 621 NALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNS 680 + NV++ TL + LG ++IDDFGTGY+S + LK + LKID SF+R + + Sbjct: 923 IMMVNVEETIRTLNAISSLGIHMSIDDFGTGYSSMSCLKRFPVNKLKIDQSFVRGLPQDK 982 Query: 681 LDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEI 740 D IV SI +A + V+AE VE E E + S + QGY +P D + Sbjct: 983 EDVAIVKSIIVMAHALNLTVIAEGVETLEQLEFLKSSRCEEFQGYYFSRPILAADIEQYL 1042 Query: 741 EPIRE 745 + + + Sbjct: 1043 QALAD 1047 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 62/311 (19%), Positives = 114/311 (36%), Gaps = 34/311 (10%) Query: 23 SLILPIFAHINTFAHISSGEVFLFYLPLALMISMMMFFSWAALPGIALGIFVRKYAELGF 82 S + + + V + P + IS ++ F + PGI LG + + Sbjct: 20 SFVYYLSGRLGLSLAFEQAGVSPVWPPTGIAISAVLIFGFRVWPGIMLGALLVNLSIALP 79 Query: 83 YETLSLTA--NFIIIIILCWGGYRVFTPRRNNVSHGDTRLISQRIFWQIVFPATLFLILF 140 + L A N + I+ + R + W + ++ Sbjct: 80 FSAAILIALGNTLEAIVAGYLLIR--------CAERYPFTQVNHTAW----FIAIAVMAP 127 Query: 141 QFAAFVGL-LASRENLVGVMPFNLGTLINYQALLVGNLIGVPLCYFIIRVVRNPFYLRSY 199 F+A +GL S NL+ + + +VG L+ VPL Sbjct: 128 MFSATIGLVSLSMHNLIEASELGIVWSTWWLGDIVGALVIVPLL--------------LT 173 Query: 200 YSQLKQQVDAKVTKKEFALWLLALGALLLLLCMPLNEKSTIFSTNYTLSLLLPLMMWGAM 259 + + + ++ V ALW L +L L L + + + ++LPL++W A+ Sbjct: 174 WFRPHESMNGGVPV--MALWGTCLVSLGLALLIFSPWHTEYDPHQLLIFMMLPLLIWTAL 231 Query: 260 RYGYKLISLLWAVVLMISI-HSYQNYIPIYPGYTTQ--LTITSSSYLVFSFIVNYMAVLA 316 R+ ++ +LL V I+I + Y P T Q LT+ +S + I+ +A Sbjct: 232 RFHHRGSTLLVTVFSGIAISGTLVGYGPFVMESTNQSLLTLQASVGAIMVTILILIASQE 291 Query: 317 TRQRAVVRRIQ 327 R+R R +Q Sbjct: 292 ERKRVNRRLLQ 302 >UniRef50_Q2W1Z2 Hypothetical 1041 kDa protein in hypE 3'region n=2 Tax=Proteobacteria RepID=Q2W1Z2_MAGSA Length = 1510 Score = 540 bits (1391), Expect = e-151, Method: Composition-based stats. Identities = 117/509 (22%), Positives = 211/509 (41%), Gaps = 24/509 (4%) Query: 258 AMRYGYKLISLLWAVVL-----MISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYM 312 + ++G +W ++ I + + IYP + T ++ + V +++ + Sbjct: 1001 SGKHGKDFYDAMWRSLIEQGCWQGEIFNRRKNGEIYPEWLTVNSVRDENGSVVNYVAIFS 1060 Query: 313 AVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL--------RDAPWSALCYLRIPGM 364 + A ++ RRI+ LA D + +PN L L R A+ ++ + Sbjct: 1061 DISAI--KSSQRRIEFLATHDELTGIPNRSLLMDRLKHAVAQAKRQKTKLAVLFIDLDNF 1118 Query: 365 EMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSH 424 +++ + G + Q ++ + L + + + +L G++ L S E++ ++ + Sbjct: 1119 KVINDSLGHDVGDQLLKQATERLKHCVRDSDTLARLGGDEFVAVLTDVSL-EKVNSVAAR 1177 Query: 425 LKQF---RFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRR 481 + F F + + + LL +T + N + Sbjct: 1178 IVDFLGASFSINDKSLFVSASIGISVFPDDGQDSLTLLKHADTA--MYRAKERGRNQYQF 1235 Query: 482 GAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELI 539 A ++ ++ + L+ ALE F + QP + V E LLR + + Sbjct: 1236 FADEMKVIALQRLTLETGLRLALETKSFRMCYQPQVDIHTGEVVGAEALLRWRDPTLGEV 1295 Query: 540 SPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRA-KMPAHRFAINLSPTSVCQARFPVE 598 SP F+P+A GL +I V L+ +A R + R AIN+S + A F + Sbjct: 1296 SPAHFIPIAESCGLIGAIGETVFTMVLEQIAYWREKGLTVPRIAINVSAHQLRDAGFAAK 1355 Query: 599 VSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARL 658 V L I + + E+TES + + + L +G +++IDDFGTGY+S + L Sbjct: 1356 VGSWLDSSGISSELIGIELTESALMERIDMVKEMLTSFDGMGMKVSIDDFGTGYSSLSYL 1415 Query: 659 KNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLG 718 K + LKID SF+ I D I +I ++R M VVAE VE+EE + G Sbjct: 1416 KKLPIHELKIDRSFVDGIALERDDRSIAKAIIDMSRALGMRVVAEGVESEEQLGVLKEEG 1475 Query: 719 IDYMQGYLIGKPQPLIDTLNEIEPIRESA 747 D +QGYL +P IE +S+ Sbjct: 1476 CDMVQGYLFHRPLSPEAFAKVIETGGKSS 1504 >UniRef50_A6F7G4 PAS sensor diguanylate cyclase and phophodiesterase n=2 Tax=Moritella sp. PE36 RepID=A6F7G4_9GAMM Length = 911 Score = 539 bits (1390), Expect = e-151, Method: Composition-based stats. Identities = 137/503 (27%), Positives = 246/503 (48%), Gaps = 34/503 (6%) Query: 255 MWGAMRYGYKLISLLWAVVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAV 314 +W ++ G + + + +Y T + +T++ + FI + + Sbjct: 419 LWNSISNGDEWSDEV---------QNQHKNGDLYWAKVTIIPMTNACGEITHFIGIQVDI 469 Query: 315 LATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRDAP--------WSALCYLRIPGMEM 366 T+ R + ++I A D + L N L DA LC+L + ++ Sbjct: 470 --TKSRIISKQIAYQAKHDMLTGLINRYEFEHQLSDAVCSVQGSQLTHVLCFLDLDQFKI 527 Query: 367 LVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHL- 425 + G + ++++ + L+P + + +L G++ A+ + E + A + L Sbjct: 528 INDTCGHAAGDELLRQIAGLIGDNLKPNDTLARLGGDEFAVLMRDCQLTEAVVAANEILD 587 Query: 426 --KQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGA 483 K+F+F W + + + + + E+ A+L+ R Sbjct: 588 KVKKFQFIWKKSCFSVGVSIGVAEICNTSGNTS----EVLIHADLACYAAKDLGRNRVHT 643 Query: 484 MYLQREL----KDKVAMMNRLQQALEHNHFFLMAQPITGMRGDV---YHEILLRMKGEND 536 + EL D+ +N +++AL + F L AQPI ++ E+LLRM+ +N Sbjct: 644 YHDNDELLTARDDEFRWVNEIKEALNEDRFELYAQPIVALQDTAQKPIFEVLLRMQDKNG 703 Query: 537 ELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAH-RFAINLSPTSVCQARF 595 LISP FLP+A + LS ID WVI+ TLQ+M + ++ +INLS S+ + Sbjct: 704 ALISPGVFLPIAERYNLSEPIDRWVIDRTLQWMKAHSQQLDMFDHISINLSGASLGDSDL 763 Query: 596 PVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASY 655 + + + ++ Q++FE+TE+ A++N+ A I + L GCQ A+DDFG+G +S+ Sbjct: 764 LQHIMTTITQAKVSPQQIMFEITETAAISNLASATIFINTLSTFGCQFALDDFGSGLSSF 823 Query: 656 ARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVL 715 A LKN+ + LKIDG FI++I++N +D +V SI + + K+ +AE+VEN+ I++ V Sbjct: 824 AYLKNLPVNTLKIDGIFIKDILTNPIDAAMVKSINEIGHLMKLKTIAEFVENDAIKQKVE 883 Query: 716 SLGIDYMQGYLIGKPQPLIDTLN 738 ++GID+ QGY IGKPQP+ L Sbjct: 884 TIGIDFAQGYGIGKPQPIDKMLT 906 >UniRef50_C5V4D8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V4D8_9PROT Length = 1138 Score = 539 bits (1390), Expect = e-151, Method: Composition-based stats. Identities = 116/465 (24%), Positives = 194/465 (41%), Gaps = 23/465 (4%) Query: 297 ITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRDA----- 351 + SS L ++ T ++ I RLA+ DP+ LPN R L L+ A Sbjct: 668 LLSSMKLDGRVVLQATVRDITERKKSESEIVRLAFYDPLTGLPNRRLLMDRLQHALTSNL 727 Query: 352 ---PWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALR 408 A+ ++ + + L G + +++ L + + V +L G++ + Sbjct: 728 RNDKHGAILFIDLDNFKSLNDTKGHAVGDLLLVEVAQRLKGCVREEDTVARLGGDEFVVL 787 Query: 409 LNTESH---------QERITALDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLL 459 L+ SH + + L + G + + + LL Sbjct: 788 LDNLSHGHDNAGAHTKRVAEKILQAL-NLSYMLQGYEYHSSPSIGVALFCADASSPDELL 846 Query: 460 GELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGM 519 ++ + A N R Q L + + + L ALE L Q Sbjct: 847 KRADSA--MYQSKAAGRNTVRFYDERTQALLLARAELEHALHHALEQQQLMLYYQVQVNA 904 Query: 520 R-GDVYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMP- 577 V E+LLR +ISP F+P+A E G+ I WV+E + + + Sbjct: 905 DYQPVGAEVLLRWFHPVLGMISPAQFIPLAEESGMIIPIGYWVLEQACDQLKRWASDVFK 964 Query: 578 -AHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHL 636 A+N+S +A F +V L+ I +L E+TES + +V+ T+Q L Sbjct: 965 CDLVLAVNVSIRQFHEADFAQKVQALVTDSGISPDRLKLEITESMLVHDVENIIATMQQL 1024 Query: 637 QELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMK 696 +++G ++DDFGTGY+S + +K + D LKID SF+R+I + D IV +I +A+ Sbjct: 1025 KKIGLNFSMDDFGTGYSSLSSIKRLPLDQLKIDQSFVRDIGHDEHDKAIVRTIIAMAQSM 1084 Query: 697 KMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIE 741 K+ ++AE +E E+ R + G QGYL KP PL D + Sbjct: 1085 KLNIIAEGIETEQQRRLLALKGCTNYQGYLFSKPVPLSDFEGLLS 1129 >UniRef50_B1XZA8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Bacteria RepID=B1XZA8_LEPCP Length = 1147 Score = 539 bits (1390), Expect = e-151, Method: Composition-based stats. Identities = 128/508 (25%), Positives = 214/508 (42%), Gaps = 24/508 (4%) Query: 254 MMWGAMRYGYKLISLLWA-----VVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFI 308 M + R+ + A + I + P + + V ++ Sbjct: 637 RMLSSGRHDRDFYEAMQAQLDHTGLWQGEIWNRHKDGSPVPELLSISAVRDPHGQVTHYV 696 Query: 309 VNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNV--------RALNRALRDAPWSALCYLR 360 + + T + R++ LA+ DP+ HLPN +AL++A R+ A+ L Sbjct: 697 GVFTDI--THLKESEARLEFLAHHDPLTHLPNRLLFNNRLDQALHQAEREGRRLAVLLLD 754 Query: 361 IPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITA 420 + + + +YG + + + ++ L+ L + + +L G++ AL ++ H + Sbjct: 755 LDRFKDINDSYGHLAGDELLKYVAQRLTQRLRQSDTLARLGGDEFALLMHDLRHDDDAAR 814 Query: 421 LDSHL-KQFRFFW---DGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPE 476 L S L W +G+ + + + C LL + A L Sbjct: 815 LASELLSGLSEPWRSSEGVEVSVGVSIGICIYPDHGRTPQTLLQGAD--AALYRAKGDGR 872 Query: 477 NMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGE 534 + R A + R ++++ + RL++AL L QP +R + E L+R + Sbjct: 873 GVYRYYADEMTRIARERLHIEARLRRALADGQLLLHYQPQVDLRSGRIIGAEALVRWQDP 932 Query: 535 NDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAEN-RAKMPAHRFAINLSPTSVCQA 593 LI P F+PVA GL I WV+ + A +PA A+N+SP QA Sbjct: 933 EQGLIPPVRFIPVAEATGLIGEIGAWVLGEACRQARAWLDAGLPALTVAVNVSPRQFHQA 992 Query: 594 RFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYA 653 +V Q+L + + L E+TE + +A LQ L+ LG +AIDDFGTGY+ Sbjct: 993 DLATQVMQVLVETGLPPTHLELELTEGALMEREAEALQVLQRLRGLGVGVAIDDFGTGYS 1052 Query: 654 SYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREA 713 S A LK D+LKID SFI +I + D +I A+I + +LV+AE VE E Sbjct: 1053 SLASLKRFPIDVLKIDRSFITDIPDDPDDMEIAAAIIAMGHSLGILVLAEGVETAEQLAF 1112 Query: 714 VLSLGIDYMQGYLIGKPQPLIDTLNEIE 741 + D QG+L +P P + Sbjct: 1113 LQQRNCDRYQGFLRSRPLPAQAFEQLLR 1140 >UniRef50_C6XAD3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XAD3_METSD Length = 751 Score = 539 bits (1389), Expect = e-151, Method: Composition-based stats. Identities = 115/475 (24%), Positives = 205/475 (43%), Gaps = 20/475 (4%) Query: 277 SIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVV 336 + Y + I V ++ + V + R + ++ LA D + Sbjct: 271 HTALIGRHGNEYAIEDSAAPIRDQDGNVLGVVLVFHDV--SEARNMANKMTYLAEHDYLT 328 Query: 337 HLPNVRALNRAL--------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLS 388 LPN LN L RD + AL +L + + + + G + Q + ++ L Sbjct: 329 GLPNRLLLNDRLNQALTIARRDQEFIALMFLDLDHFKNINDSLGHEVGDQLLKMVARRLE 388 Query: 389 PLLEPGEDVYQLSGNDLALRLNTE----SHQERITALDSHLKQFRFFWDGMPMQPQIGVS 444 L + + + G++ + L S E L + + + + Sbjct: 389 SCLRASDTISRQGGDEFMILLPELTNYFSPAEVAEKLLAA-ATVPYEIGSHEITVSASIG 447 Query: 445 YCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQAL 504 + LL + A + + N + + + + + ++L++A+ Sbjct: 448 IAVFPDDGENGELLTKNAD--AAMYHAKSLGRNNYQFFTRAMNERVMEIAELESKLRRAV 505 Query: 505 EHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVI 562 E N F L QP +R V E L+R + + L++PD F+P+A + GL I +WV+ Sbjct: 506 ERNEFVLYYQPKIDIRTGQVVGAEALIRWQHPSWGLVAPDRFIPIAEDSGLIRPIGLWVM 565 Query: 563 EHTLQFMAENRA-KMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESN 621 + E +A + A+NLS + Q F EVS++L +E L EVTES Sbjct: 566 REACRQNQEWQAAGLARIPVAVNLSTVQLRQHNFLQEVSEILLMSGLEPDYLELEVTESV 625 Query: 622 ALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSL 681 A+ + L L+ +G ++A+DDFGTGY+S + LK + + +KID SFIR+I ++ Sbjct: 626 AIHAETEVINWLHKLRSMGVKLALDDFGTGYSSLSYLKRLPINNVKIDKSFIRDIETDPD 685 Query: 682 DYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDT 736 D I+ +I ++ ++ V+AE VEN E + G D MQG++ +P P + Sbjct: 686 DATIITAIIRMSHGLRLNVIAEGVENINQLEFLKKEGCDQMQGFIASRPVPADEF 740 >UniRef50_C6P1Y8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1Y8_9PROT Length = 812 Score = 539 bits (1389), Expect = e-151, Method: Composition-based stats. Identities = 116/519 (22%), Positives = 207/519 (39%), Gaps = 37/519 (7%) Query: 258 AMRYGYKLISLLWAVVL-----MISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYM 312 + ++ + +W +L I + IY + S V+ + + Sbjct: 301 SGKHDNEFYRHMWQAILNEGHWQGEIWDKRKTGEIYAKLAHISILRRSDGGVYRHVAQFS 360 Query: 313 AVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL--------RDAPWSALCYLRIPGM 364 + T ++ I A D + LPN R LN L R+ AL +L + Sbjct: 361 DI--TEKKQKDELIFWQANYDALTCLPNRRLLNDRLAHALAANKRNEDCGALMFLDLDKF 418 Query: 365 EMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQ-----ERIT 419 + L G +++ + + + V ++ G++ + L + Sbjct: 419 KTLNDTLGHAYGDMLLVEVARRIKSCVREVDTVARIGGDEFVVLLENLGADIKDATQAAA 478 Query: 420 ALDSHLK-----QFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIV--T 472 + ++ ++ P IGVS + EL A++++ Sbjct: 479 HIAEKIRASLSTPYQLHDKMHHSSPSIGVSLIHCNGESAE------ELIKQADMAMYQAK 532 Query: 473 NAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITG-MRGDVYHEILLRM 531 A N R +Q+ ++ A+ + L+ A+ L Q V E LLR Sbjct: 533 EAGRNAVRFFDPQMQQSVETIAALESDLRHAVHERQLQLFYQIQLDHTHHPVGAEALLRW 592 Query: 532 KGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAEN--RAKMPAHRFAINLSPTS 589 ++SP F+P A E L I WV++ + +A + + A+N+S Sbjct: 593 IHPVRGMVSPAQFIPFAEESSLILDIGHWVLDEACRQIAAWSHQERTRDLVLAVNISARQ 652 Query: 590 VCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQE-LGCQIAIDDF 648 Q F +V ++ K+ I+ +L E+TES AL + + L+ LG +++DDF Sbjct: 653 FKQPDFVEQVGAMIRKHAIQPARLKLELTESIALEELDVIITKMHALRNGLGISLSLDDF 712 Query: 649 GTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENE 708 GTGY+S + LK + D +KID SF+R++ +S D +V +I +A + V+AE VE Sbjct: 713 GTGYSSLSYLKRLPLDQIKIDQSFVRDMTVDSGDAVMVKTIIDMAHNFGIEVIAEGVETA 772 Query: 709 EIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIRESA 747 + G QGYL G+P PL + ++ SA Sbjct: 773 GQFFLLKQYGCLLFQGYLFGRPVPLREFEALLQQTGSSA 811 >UniRef50_C5V280 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V280_9PROT Length = 725 Score = 539 bits (1389), Expect = e-151, Method: Composition-based stats. Identities = 118/508 (23%), Positives = 215/508 (42%), Gaps = 29/508 (5%) Query: 254 MMWGAMRYGYKLISLLWAVVL-----MISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFI 308 + + R+ + +W + I + IYP + T + S V ++ Sbjct: 203 RLLKSGRHDADFYAAMWQCIKNTGQWSGEIWDRRKNGEIYPKWLTITEVKSFDGSVVHYV 262 Query: 309 VNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNV--------RALNRALRDAPWSALCYLR 360 + + + T ++A RI LA+ DP+ LPN +++ +LRD AL ++ Sbjct: 263 SSQVDI--TARKASEDRIHNLAFYDPLTQLPNRRLLLDRLRHSVSFSLRDGRHVALMFID 320 Query: 361 IPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTES-----HQ 415 + + + G + ++++ + + V +L G++ + L+ + Sbjct: 321 LDKFKKINDTLGHDIGDLLLKQVAERTLTCVRTCDTVARLGGDEFVVLLDGLAGNLHEAA 380 Query: 416 ERITALDSHL---KQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVT 472 + + + + G Q + LL + + + Sbjct: 381 AQAKQIGRKIIDTLNQSYDLAGHEYQSGASIGIALFDEHCQTAEDLLKQADIA--MYQAK 438 Query: 473 NAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDV-YHEILLRM 531 A N R +Q + +VA+ + AL F++ QP+ G V E L+R Sbjct: 439 KAGRNTLRFFDPEMQASILARVALEKDFKDALLQEQFYICYQPVISREGRVAGAEALVRW 498 Query: 532 KGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAEN--RAKMPAHRFAINLSPTS 589 + ++SP F+P+A E GL + WV++ + +++ R A+N+S Sbjct: 499 RHSIRGIVSPADFIPLAEETGLIVPLGNWVLKTACRQLSDWSSRDDTRDLTIAVNVSARQ 558 Query: 590 VCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFG 649 + Q F V L+ + +L E+TES +++ + + + L+E G A+DDFG Sbjct: 559 LKQEDFVTTVMGLIEETGANPRRLKLELTESMLVSDAESIIVKMNLLKEAGITFALDDFG 618 Query: 650 TGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEE 709 TGY+S A L + D LK+D SF+RNI + I A+ +LA K+ VVAE VENE Sbjct: 619 TGYSSLAYLSRLPLDQLKVDQSFVRNIETEDSAVVICAATINLAHNLKLKVVAEGVENEA 678 Query: 710 IREAVLS-LGIDYMQGYLIGKPQPLIDT 736 R + S D++QGYL KP + + Sbjct: 679 QRYFLSSVHQCDFLQGYLFSKPVAIDEF 706 >UniRef50_D0IUW1 Diguanylate cyclase/phosphodiesterase with n=3 Tax=Comamonadaceae RepID=D0IUW1_COMTE Length = 900 Score = 538 bits (1388), Expect = e-151, Method: Composition-based stats. Identities = 134/542 (24%), Positives = 228/542 (42%), Gaps = 34/542 (6%) Query: 235 NEKSTIFSTNYTLSLLLPL----------MMWGAMRYGYKLISLLWAVVLM-----ISIH 279 + S I S N+ + LL M+ + R+ +WA + I Sbjct: 353 DAHSRILSVNHAFTKLLGFSEAEMLGKTPRMFKSGRHDKAFYDAMWASMHATGHWQGEIW 412 Query: 280 SYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLP 339 + + ++P + + ++ V ++ + + A ++A ++++ LA+ D + LP Sbjct: 413 NRRKNGEVFPERMSLSAVKDANDKVTHYVCMFTDISA--EKAREQQLEFLAHRDTLTGLP 470 Query: 340 NVRALNRALRDA--------PWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLL 391 N R L +A A+ I + + +YG + + + +S + L Sbjct: 471 NRSQFTRMLGEAVELSQSTNRRMAVLLFNIDRFKDVNDSYGHSIGDEVLRHVSVQMQGAL 530 Query: 392 EPGEDVYQLSGNDLAL----RLNTESHQERITALDSHLKQFRFFWDGMPMQPQIGVSYCY 447 G+ + +L+G+++ + +S + L + Q DG+ + + C Sbjct: 531 RHGDIIGRLAGDEICVVAQSICGRDSAVDVAERLMAAAGQPWTTPDGLSVVVSVSAGICL 590 Query: 448 VRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHN 507 LL A + N + + ++++A+ RL++ALE Sbjct: 591 YPDHALTADDLLQ--GAHAAVYGAKARGSNAWCFFHENMTQAARERLALEARLRRALELG 648 Query: 508 HFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHT 565 H L QP + V E LLR + LISP F+PVA G+ + +WV+ Sbjct: 649 HMRLYYQPQIELATGRLVGAEALLRWLDPEEGLISPARFIPVAENSGVIGPLGLWVLGEA 708 Query: 566 LQFMAENRA-KMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALT 624 + + RA +P A+N+S ++ L K A L E+TES Sbjct: 709 CRQGQQWRAAGLPDLAIAVNVSLHQFLLTDIAGATAEALNKSGFPASLLELEITESALAE 768 Query: 625 NVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQ 684 ++A L L+ELG ++AIDDFGTGY+S A LK DLLKID FIR+I ++ D Sbjct: 769 KPEEALAVLNRLRELGLRLAIDDFGTGYSSLAHLKRFPLDLLKIDQGFIRDIPHSADDMT 828 Query: 685 IVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIR 744 I +S+ L + V+AE VE +E + G DY QGY +P P D +E R Sbjct: 829 ISSSVIALGHAMGLKVLAEGVETQEQLSFLQQKGCDYFQGYFCSRPLPAEDFTRLLEKTR 888 Query: 745 ES 746 E Sbjct: 889 EG 890 >UniRef50_A1K5Q6 GGDEF/EAL/PAC/PAS-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K5Q6_AZOSB Length = 828 Score = 538 bits (1387), Expect = e-151, Method: Composition-based stats. Identities = 123/510 (24%), Positives = 219/510 (42%), Gaps = 23/510 (4%) Query: 254 MMWGAMRYGYKLISLLWAVVLM-----ISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFI 308 + + R+G +W + I + + +YP + T T+ V +++ Sbjct: 303 RILQSGRHGADYYRAMWRTLARTGQWQGEIWNRRKTGEVYPQWLTIGTVRDDEGEVSNYV 362 Query: 309 VNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNV--------RALNRALRDAPWSALCYLR 360 + + ++ + +++RLA+ DP+ LPN A++RA R A+ +L Sbjct: 363 AVFSDI--SQIKDAQSQLERLAHYDPLTGLPNRALLGDRLAHAISRARRAGTSVAVLFLD 420 Query: 361 IPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITA 420 + G + + + G + Q ++ L L V + G++ A+ L E ++ Sbjct: 421 LDGFKNVNDSLGHPAGDRLLQIIAERLCGALRSEGSVSRFGGDEFAVVLEDVVRGEAVSE 480 Query: 421 LDSHLKQF---RFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPEN 477 + HL DG + + L+ +T + N Sbjct: 481 VAEHLIAEIARPLDLDGHGAHVSASIGIALFPRDGDDATTLIKAADTA--MYRSKALGRN 538 Query: 478 MQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDV--YHEILLRMKGEN 535 + + ++++ + L+QALE F L QP +R V E LLR + Sbjct: 539 TFSFHHEDMAQAAHRRLSLEHGLRQALEQGRFELWYQPQIDLRTGVLAGAEALLRWRDPE 598 Query: 536 DELISPDSFLPVAHEFGLSSSIDMWVIEHTLQF-MAENRAKMPAHRFAINLSPTSVCQAR 594 L+SP F+P+A E GL I +WV+E + A + R A+N++ + + Sbjct: 599 RGLVSPAEFVPLAEETGLILPIGLWVLEEACRAGRAWLDVGLAPGRIAVNVAAPQIERGG 658 Query: 595 FPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYAS 654 F V+++L+ + L E+TE + L + + A++ + L+ LG +AIDDFGTGY+S Sbjct: 659 FDQAVARVLSASGLPPAALEVEITEGSLLRSAENARLAVAALRALGVGVAIDDFGTGYSS 718 Query: 655 YARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAV 714 A LKN+ LKID F+R++ ++ + I +I + R VVAE VE + Sbjct: 719 LAYLKNLAVQTLKIDREFVRDLPHDAGNLAITRAIIAMCRSLGFGVVAEGVEEPAQAAFL 778 Query: 715 LSLGIDYMQGYLIGKPQPLIDTLNEIEPIR 744 +S G QGYL KP P + + R Sbjct: 779 VSEGCTLAQGYLFAKPMPGAEFAEWLRTYR 808 >UniRef50_C9YA12 Uncharacterized signaling protein PA1727 n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YA12_9BURK Length = 786 Score = 538 bits (1387), Expect = e-151, Method: Composition-based stats. Identities = 126/520 (24%), Positives = 210/520 (40%), Gaps = 47/520 (9%) Query: 254 MMWGAMRYGYKLISLLWAVVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMA 313 +M ++R +W + YP +TT + S S V ++ N Sbjct: 278 VMNESIRSNGSWQGEVW---------DRRKNGETYPAWTTITAVRSESGDVTHYVANLSD 328 Query: 314 VLATRQRAVVRRIQRLAYVDPVVHLPNVR--------ALNRALRDAPWSALCYLRIPGME 365 + ++A I+ L Y D + LPN R A++ AL AL ++ + + Sbjct: 329 --FSARKAAENEIKTLVYFDSLTMLPNRRMLMGRLETAMHAALSTGHLGALLFVDLDDFK 386 Query: 366 MLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNT------ESHQERIT 419 L G Q++++ L + + V +L G++ + L E+ + Sbjct: 387 TLNDTLGHHQGDILLQQVANRLQSCVREADTVARLGGDEFVVMLEGLSKDVAEASTQAEA 446 Query: 420 ALDSHLKQFRFFWD----GMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIV--TN 473 ++ +D P +G++ L E A+L++ Sbjct: 447 VAGKVMQALNQPYDLGTLTRSSTPSVGITVF------GKQQESLDEPLKRADLAMYQAKA 500 Query: 474 APENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDV-YHEILLRMK 532 A N R Q + + + L+ ALE F L QP V E L+R + Sbjct: 501 AGRNTSRLFDPKTQAAVTLRADLEAALRTALEEEQFVLYLQPQISEDVRVTGAEALIRWQ 560 Query: 533 GENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAK--MPAHRFAINLSPTSV 590 L+ P F+ VA + G+ I WV+ + +A + A+N+S Sbjct: 561 HPTRGLVMPGEFIAVAEDCGMIVPIGNWVLNTACKQLALWATQPAFAHMTIAVNVSAKQF 620 Query: 591 CQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGT 650 Q F +V L+++ +A L E+TES + NV + ++ LQ G A+DDFGT Sbjct: 621 HQHDFVEQVLDALSRHGAQASGLKIEITESMLIANVDDVIVRMEELQHHGVGFAMDDFGT 680 Query: 651 GYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEI 710 GY+S LK + D+LKID SF+R+++ ++ D I I LA + V+AE VE E Sbjct: 681 GYSSLTYLKRLPLDVLKIDQSFVRDVLVDTNDAAIANMIVALANSMGLSVIAEGVETVEQ 740 Query: 711 REAVLSLGIDYMQGYLIGKPQP-------LIDTLNEIEPI 743 + + G QGYL +P P L D L ++P Sbjct: 741 MQYLARHGCHAYQGYLFSRPVPVERFETSLADFLRPLQPA 780 >UniRef50_Q479L8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q479L8_DECAR Length = 582 Score = 538 bits (1387), Expect = e-151, Method: Composition-based stats. Identities = 118/485 (24%), Positives = 202/485 (41%), Gaps = 27/485 (5%) Query: 278 IHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVH 337 I Y + + + + + + N+ + A+ + R+ LAY DP+ + Sbjct: 97 IWDKNKNGERYNRWLKIAVLRDAEGQIENHVANFSEMEAS--KEYADRLAYLAYHDPLTN 154 Query: 338 LPNVRALNRAL--------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSP 389 LPN A L RD AL + + + + G + + QK++ L Sbjct: 155 LPNRLAFESQLAQALRGCERDNRQLALMLIDLDNFKNINDTLGHHVGDELLQKVALRLRE 214 Query: 390 LLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLKQ-----FRFFWDGMPMQPQIGVS 444 + + V ++ G++ + L + + ++Q +R + P IG+S Sbjct: 215 SVRSSDLVARIGGDEFVIVLPEIESPLTAARVANKVQQNMADSYRIADHALYATPSIGIS 274 Query: 445 YCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQAL 504 + + L N + +A N + + +++ M N L+QA+ Sbjct: 275 LFPIDGSDANTLLR----NADTAMYHAKDAGRNNHQFYTARMNEAAGERLHMENELRQAI 330 Query: 505 E-----HNHFFLMAQPITGMRGDVYH--EILLRMKGENDELISPDSFLPVAHEFGLSSSI 557 + F L QP E LLR +SP F+ +A E GL + Sbjct: 331 SAISPGDSEFSLHFQPQVQTATGQVFGLEALLRWNNPIFGQVSPMRFIAIAEETGLIQPL 390 Query: 558 DMWVIEHTLQFMAENRAKM-PAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFE 616 WVI T + + + + R AIN+S + + V L+ Y + + E Sbjct: 391 GDWVIWETCRLIRQMKQHGIEDIRIAINISAQQLRHENLLLLVRGALSCYDLRPEDIELE 450 Query: 617 VTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNI 676 +TES A+ N + L L +G +AIDDFGTGY+S A LK++ LK+D SF+++I Sbjct: 451 ITESTAMQNPETTLSILDQLAAMGIVLAIDDFGTGYSSLAYLKHLPIQRLKLDRSFVKDI 510 Query: 677 VSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDT 736 ++ D I + L + +VAE VE E R + SLG D +QGYL KP P +T Sbjct: 511 EIDANDAAICTATIALGHSLGLELVAEGVETEAQRAFLASLGCDTLQGYLYSKPMPFEET 570 Query: 737 LNEIE 741 + ++ Sbjct: 571 IAYLK 575 >UniRef50_C6XAG8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XAG8_METSD Length = 950 Score = 538 bits (1386), Expect = e-151, Method: Composition-based stats. Identities = 114/468 (24%), Positives = 203/468 (43%), Gaps = 31/468 (6%) Query: 296 TITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL------- 348 + + + A Q+ RIQ LA+ D + LPN + L Sbjct: 484 AVYDLHGNITRIEGAIQDISA--QKVAESRIQHLAFYDSLTSLPNRQLFIDRLEHTLAYS 541 Query: 349 -RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLAL 407 R + A+ ++ + + L G L Q+++ ++ L + V + G++ + Sbjct: 542 ARTSKSGAVLFIDLDNFKTLNDTMGHDLGDMLLQQVAMRIAGCLRESDTVARFGGDEFVV 601 Query: 408 RLNTESHQERITALDSHL----------KQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYL 457 L+ S + A + L F+F IGV+ + Sbjct: 602 LLHELSGNHQEAAAQARLVSEKILISFAHPFQFSGYEHHTSASIGVTLF------DQQPT 655 Query: 458 LLGELNTVAELSIV--TNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQP 515 + E+ A+L++ A N+ R +Q + D+V M L+ L ++ FFL QP Sbjct: 656 TVDEILKRADLAMYQSKAAGRNVIRFFDPEMQALIADRVEMEEDLRNGLRNDEFFLCYQP 715 Query: 516 ITGMRGDV-YHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRA 574 +G + E LLR + +I P +F+P+A + GL S+ WV+ + + Sbjct: 716 QVDNQGRLLGAEALLRWRNPKRGMIPPSTFIPLAEDSGLIVSVGNWVMYAACKQLVLWAQ 775 Query: 575 K--MPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQIT 632 + + A+N+S + Q F ++ ++L +L E+TES + N++ Sbjct: 776 QPLTSSLTLAVNVSAKQLRQMDFVDQIVEVLNVTGANPKRLKLELTESLMVNNIEDVIAK 835 Query: 633 LQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHL 692 + L+ +G +IDDFG GY+S + LK + D LKID SF+R+++++ D I +I L Sbjct: 836 MTELKNIGVGFSIDDFGIGYSSLSYLKLLPLDQLKIDQSFVRDVLTDPNDAVIARTIIAL 895 Query: 693 ARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEI 740 + + V+AE VE RE + + G D QGYL KP P + ++ Sbjct: 896 GKSLNLQVIAEGVETLSQREFLDNYGCDAYQGYLFSKPVPADEFERDV 943 >UniRef50_C6P3H6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P3H6_9PROT Length = 837 Score = 537 bits (1385), Expect = e-151, Method: Composition-based stats. Identities = 112/507 (22%), Positives = 211/507 (41%), Gaps = 28/507 (5%) Query: 254 MMWGAMRYGYKLISLLW-----AVVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFI 308 + + R G + + +W + I + +YP + T + + + ++ Sbjct: 324 RVLSSGRQGSEFYAAMWKRLLGSGSWTGEIWDKRKNGEVYPKWLTITAVKDNEGVTTEYV 383 Query: 309 VNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL--------RDAPWSALCYLR 360 + + T ++ I LA+ D + LPN R L + R + AL +L Sbjct: 384 AIFSDI--TLRKHAEEEIYTLAFYDSLTKLPNRRHLLDRINQARSISARSNHYGALLFLD 441 Query: 361 IPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTE--SHQERI 418 + ++L G + ++S + + + V ++ G++ + + ++E Sbjct: 442 MDRFKILNDTLGHDYGDLFLVEVSRRMRNCVRDMDTVARIGGDEFVVLIEEIGTDNEEVS 501 Query: 419 TALDSHLKQFR------FFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVT 472 T + ++ R + + C + LL + + Sbjct: 502 TKVALIAEKIRAALTEPYLLKDKEHHSSPSIGVCLYLGNEESVDTLLRHADLA--MYQAK 559 Query: 473 NAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQ-PITGMRGDVYHEILLRM 531 + N R +Q ++ + A+ ++ A+ L Q +T + E L+R Sbjct: 560 ESGRNGVRFFDPAMQLAVETRAALEADMRHAVTGKQLRLYYQIQLTSDHRPLGAEALIRW 619 Query: 532 KGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAEN--RAKMPAHRFAINLSPTS 589 L+SP F+P+A E L I WV+E + + + AIN+S Sbjct: 620 MHPVRGLVSPAQFIPIAEESSLILEIGHWVLETACKQLVLWSKHERTRNLILAINVSAQQ 679 Query: 590 VCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFG 649 + F VS LL +Q+ +L E+TES L++V + L+ LG ++A+DDFG Sbjct: 680 FNKHDFVDTVSTLLHLHQLNPNRLKLELTESVVLSDVADVVSKMHALKALGVKLALDDFG 739 Query: 650 TGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEE 709 TGY+S + LK + D +KID SF+ ++ ++ D +V +I +LA +M V+AE VE E+ Sbjct: 740 TGYSSLSYLKQLPLDQIKIDRSFVSDVTTDPSDAVMVQTIINLAHNFRMNVIAEGVETED 799 Query: 710 IREAVLSLGIDYMQGYLIGKPQPLIDT 736 + G QG+L GKP P+ + Sbjct: 800 QLNFLKQNGCMAYQGFLFGKPMPIDEF 826 >UniRef50_A4Y0E0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=23 Tax=Pseudomonas RepID=A4Y0E0_PSEMY Length = 766 Score = 537 bits (1384), Expect = e-151, Method: Composition-based stats. Identities = 119/499 (23%), Positives = 215/499 (43%), Gaps = 23/499 (4%) Query: 255 MWGAMRYGYKLISLLWAV-----VLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIV 309 + + R+ LW + + + IYP + I + ++ Sbjct: 251 LLKSGRHDAAFYQSLWQALHNRDAWSGEVWNRRKSGEIYPQWQCIRVIHDEHGRISHYVA 310 Query: 310 NYMAVLATRQRAVVRRIQRLAYVDPVVHLPNV--------RALNRALRDAPWSALCYLRI 361 + + T + R + LA+ DP+ +LPN AL R+ + A+ + + Sbjct: 311 VFSDI--TALKRSQRELDYLAHHDPLSNLPNRLLFTERIAHALERSKSEQLRGAVLLIDL 368 Query: 362 PGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITAL 421 + + ++ G + + + L L G + +L G++ L T + + L Sbjct: 369 DHFKHINESLGHNVGDLLLKSVGERLQQDLPGGCTLARLGGDEFGLLSETCADAPQAAEL 428 Query: 422 DSHLK---QFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENM 478 +L + F D + + + + +L ++ L ++ Sbjct: 429 AQNLLRCLEAPFRLDEHELYIGASIGISLFPDDADSVEQVLRNADSA--LFKAKSSGREG 486 Query: 479 QRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGEND 536 L + +V + + L+ AL+++ + QP+ + V E L+R + Sbjct: 487 YAFYVQELTDYARQRVELASSLRHALDNHELRVFYQPLHDLENGNPVGMEALVRWQHPQR 546 Query: 537 ELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRF-AINLSPTSVCQARF 595 LI P F+P+A + G+ ID WV+E M A+ A RF A+N+S + Sbjct: 547 GLIPPAEFIPIAEDNGMIGPIDAWVLEQACGQMMRWNAEGSALRFVAVNVSSRLFSRGEL 606 Query: 596 PVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASY 655 ++V+Q+LA+ + QL EVTES + + A L L+ LG ++AIDDFGTGY+S Sbjct: 607 DLKVAQVLAETGLSPQQLELEVTESAIMEDPDAALSLLTRLRALGVRLAIDDFGTGYSSL 666 Query: 656 ARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVL 715 ARLK + D LK+D SF+R + + D I ++ L + V+AE +E+ + + Sbjct: 667 ARLKRLPVDKLKLDQSFVRGLPDDIEDAAIARAVIALGHSLGLNVLAEGIESPAQVDFLR 726 Query: 716 SLGIDYMQGYLIGKPQPLI 734 +LG DY QGY G+P P+ Sbjct: 727 ALGCDYGQGYHFGRPAPVT 745 >UniRef50_Q3SK01 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC and GAF sensor(S) n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SK01_THIDA Length = 1059 Score = 537 bits (1384), Expect = e-151, Method: Composition-based stats. Identities = 115/445 (25%), Positives = 186/445 (41%), Gaps = 27/445 (6%) Query: 316 ATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL------RDAPWSALCYLRIPGMEMLVK 369 T ++A ++ +LA+ DP+ LPN L L R AL + + + L Sbjct: 603 VTERKAAEHKVHQLAFYDPLTGLPNRELLGDRLQHAMQVRHGQVGALLLIDLDNFKTLND 662 Query: 370 NYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERIT---------- 419 G + Q+++ L L G+ + ++ G++ + L S Sbjct: 663 TLGHAMGDLLLQQIAQRLQTCLRKGDTLARVGGDEFVIVLEGLSASPGDAGSLATRVGEK 722 Query: 420 ALDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNA--PEN 477 L S + F+ IG++ N L EL A+L++ N Sbjct: 723 ILASFARPFQLADYVHHCTASIGITLF------NDRPTTLDELRKRADLAMYQAKAHGRN 776 Query: 478 MQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDV-YHEILLRMKGEND 536 R +Q + + + L++AL F L Q RG V E LLR + Sbjct: 777 ALRFFDPAMQAVVAARAELEVDLREALRLGAFELHYQAQVDARGCVSGAEALLRWQHPQR 836 Query: 537 ELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRA--KMPAHRFAINLSPTSVCQAR 594 I+P SF+P+A E GL + +WV++ + M A+N+S QA Sbjct: 837 GWIAPASFIPLAEETGLILPLGLWVLDVACAQLVAWSKMPHMARLSLAVNVSARQFRQAD 896 Query: 595 FPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYAS 654 F +V + + + +L E+TES L N+ + + L+ G ++DDFGTGY+S Sbjct: 897 FAAQVLAAIERSGADPRRLKLELTESLMLDNLDDTILKMSALKAHGIGFSLDDFGTGYSS 956 Query: 655 YARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAV 714 A LK + D +KID SF+R+++ ++ D I SI L + + VVAE VE + + Sbjct: 957 LAYLKRLPLDEIKIDQSFVRDVLIDANDASIARSILALGQSLNLEVVAEGVETDAQHAFL 1016 Query: 715 LSLGIDYMQGYLIGKPQPLIDTLNE 739 G QGYL +PQP Sbjct: 1017 AEHGCQAYQGYLFNRPQPARQFEAW 1041 >UniRef50_C5JAR6 Conserved uncharacterized protein n=1 Tax=uncultured bacterium RepID=C5JAR6_9BACT Length = 922 Score = 537 bits (1383), Expect = e-151, Method: Composition-based stats. Identities = 116/506 (22%), Positives = 199/506 (39%), Gaps = 26/506 (5%) Query: 255 MWGAMRYGYKLISLLWAVVL-----MISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIV 309 + + R L LW + + + + ++ + I +S ++ +I Sbjct: 413 ILKSGRTPAALYDSLWETISAGKEWRGELMNRKKDGSLFWQHAIISPIRDNSGVITHYIS 472 Query: 310 NYMAVLATRQRAVVRRIQRLAYVDPVVHLPNV--------RALNRALRDAPWSALCYLRI 361 + ++ R+ R A D + LPN +A+ +A R AL L + Sbjct: 473 VKEDISI--RKEYEERLVRQANYDALTGLPNRILAMDRLKQAIAQAQRYNRKVALMLLDL 530 Query: 362 PGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITAL 421 + + G ++ + L L G+ V +L G++ L L + + Sbjct: 531 DDFKKVNDTLGHAAGDLLLKEAALRLVDCLREGDTVARLGGDEFVLLLPDLTDTSSAEVV 590 Query: 422 DSHL-----KQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPE 476 + + F + IG++ P + +L N A + + Sbjct: 591 AEKILAACNQPFDVGGHEAYIAGSIGIAIF----PDDERDPILLMRNADAAMYRSKREGK 646 Query: 477 NMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGE 534 + R + + + M ++L+ A+E N + QP+ V E LLR Sbjct: 647 GVFRYFTPEMNARALEHMRMESQLRHAIERNEMKVHYQPLVDSGTGRLVGAEALLRWSNP 706 Query: 535 NDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQAR 594 +SP+ F+P+A E GL SI WV+ + A + A+N+S + Sbjct: 707 VLGEVSPEQFIPLAEETGLILSIGAWVLRTACRDAASWQRPDHEIFVAVNISGKQFQKRT 766 Query: 595 FPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYAS 654 V L + + L E+TES L + ++ +Q L+ LG AIDDFGTG++S Sbjct: 767 LVEIVRSSLNESGLPPACLELELTESVLLEHTQETLSIIQELESLGVGFAIDDFGTGFSS 826 Query: 655 YARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAV 714 + L+ D LKID SFI+++ N D +V SI +A + VV E VE RE + Sbjct: 827 ISYLRRFPFDTLKIDRSFIKDLGDNEGDADLVKSIIAMANSMSLKVVGEGVETHGQREFL 886 Query: 715 LSLGIDYMQGYLIGKPQPLIDTLNEI 740 G QG+L +P P D I Sbjct: 887 RLSGCHIAQGWLYSRPIPGKDFQELI 912 >UniRef50_A3JCF9 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=A3JCF9_9ALTE Length = 1133 Score = 536 bits (1382), Expect = e-150, Method: Composition-based stats. Identities = 137/464 (29%), Positives = 234/464 (50%), Gaps = 28/464 (6%) Query: 292 TTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALR-- 349 T + + + ++V V T + + +++ A DP+ L N R R+L+ Sbjct: 667 LTPAPLHNHAGEPVGWVVVMQDV--TNSKLLQQQLSFQAIHDPLTGLINRREFERSLQSL 724 Query: 350 ------DAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGN 403 +A LCYL + +++ G + ++L++ L PLL + + +L G+ Sbjct: 725 IQDVEHNASEHLLCYLDLDQFKIVNDTCGHQAGDELLKQLANTLKPLLRQSDILARLGGD 784 Query: 404 DLALRLNTE---SHQERITALDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLG 460 + + L+ QE L + F F WDG + + ++ P + ++L Sbjct: 785 EFGVLLSHCPLNQGQEIAEQLREAVCGFHFSWDGQVFAVGVSIGIVHLTQPCGDLGIMLS 844 Query: 461 ELNTVAELSIVTNAPENMQRRGAMYLQRELK-----DKVAMMNRLQQALEHNHFFLMAQP 515 + +T L A + R ++L + D+V +NR++QAL +HF L QP Sbjct: 845 KADTACYL-----AKNLGRNRVHLHLPDSSEVKLQTDQVQWVNRIRQALNEDHFRLFCQP 899 Query: 516 ITGMR----GDVYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMA- 570 I + ++EILLR+K ++ P +FLP A F L ID+WVI +TL +M Sbjct: 900 IMALDQADADPTHYEILLRLKDARGHMVPPGAFLPSAERFNLMPQIDLWVIRNTLAWMGG 959 Query: 571 ENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQ 630 + R AINLS S+ + + L K+++ A ++ FE+TE+ A+ ++K+AQ Sbjct: 960 QLRGSHLDLHCAINLSGASIGHPECLQTIREQLTKHRVPAHRVCFEITETTAMADLKKAQ 1019 Query: 631 ITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASIC 690 + L+ LGC+ A+DDFG+G +S+ L++++ D LKIDG FIR + + +D IV SI Sbjct: 1020 DFIGELRTLGCKFALDDFGSGLSSFGYLRHLSVDYLKIDGIFIRELAQSPIDRAIVDSIN 1079 Query: 691 HLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLI 734 + + + VAE+VE+ E + LG+DY QGY +G+PQPL Sbjct: 1080 TIGHIMGLKTVAEFVEDGATHEILHQLGVDYAQGYHLGRPQPLE 1123 >UniRef50_Q2SFK1 FOG: EAL domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SFK1_HAHCH Length = 1092 Score = 536 bits (1382), Expect = e-150, Method: Composition-based stats. Identities = 114/481 (23%), Positives = 206/481 (42%), Gaps = 23/481 (4%) Query: 277 SIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVV 336 + +Y+ ++ +T + V F+ V T +++ D + Sbjct: 461 LLKNYRKDGTLFWSELKVAPVTDAKGDVTHFVAILNDV--TESIQYQAQLEYKTKYDNLT 518 Query: 337 HLPNVRALNRALRDA--------PWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLS 388 LPN LN ++ A AL + + + + G Q +++ L Sbjct: 519 GLPNRNLLNDRIQQAIAYAARRNKGFALAVFDLDNFKYINDSMGHETGDQLLTEVAESLR 578 Query: 389 PLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLKQF-----RFFWDGMPMQPQIGV 443 L G+ + +L G++ + ++ E + + + ++Q R + + P IGV Sbjct: 579 SCLREGDTLARLGGDEFVILMHKEECDRPLGLMLNRIQQLVSQPRRLKDKEILVTPSIGV 638 Query: 444 SYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQA 503 C LL +T + N + ++ +V M L++ Sbjct: 639 --CQFPEDGEDASTLLKNADTA--MYKAKERGRNRICSYTQEMNESIQKRVQMEQDLRRG 694 Query: 504 LEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWV 561 +E+ L QP G V E L+R + + D ++ P F+P+A E GL + +D WV Sbjct: 695 IENGELELYYQPQLDPHGGGAVGLEALVRWR-KGDRMVPPLEFIPIAEETGLITEVDAWV 753 Query: 562 IEHTLQFMAENRAK-MPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTES 620 + + R + ++NLSP A V ++L + IE L EVTES Sbjct: 754 LRAACLQLKMWRDQKQQMVPVSVNLSPRQFQDAYCVELVRKVLQESNIEPGCLKIEVTES 813 Query: 621 NALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNS 680 + N ++A T+ L+ +G Q+++DDFGTGY+S + LK D LKID SF+RN+ ++ Sbjct: 814 MVMHNAEEALRTMTQLKAMGVQLSMDDFGTGYSSLSYLKMFPFDQLKIDKSFVRNVTNDP 873 Query: 681 LDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEI 740 + I+ +I L + + +VAE VE E ++ G D +QGY P P+ ++ + Sbjct: 874 QEAAIIRAIIGLGKTLGIKIVAEGVETVEQYSFLVRAGCDLIQGYFYSPPLPVAACMHFL 933 Query: 741 E 741 + Sbjct: 934 Q 934 >UniRef50_Q47FU0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47FU0_DECAR Length = 1006 Score = 536 bits (1381), Expect = e-150, Method: Composition-based stats. Identities = 109/504 (21%), Positives = 208/504 (41%), Gaps = 31/504 (6%) Query: 254 MMWGAMRYGYKLISLLWAVVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMA 313 MW + +W + IYP + + I ++ + ++ Sbjct: 514 RMWNGIAERGFWQGEIW---------DRRKDGGIYPKWMSISVIRGEDGMIRYHVAHFTD 564 Query: 314 VLATRQRAVVRRIQRLAYVDPVVHLPNV--------RALNRALRDAPWSALCYLRIPGME 365 V + +RA R+ +A+ D + L N +AL A RD A+ ++ + + Sbjct: 565 V--SSERAAEERLHHMAHHDVLTGLLNRLSLKGRLDQALAAARRDGSRVAVLFVDLDRFK 622 Query: 366 MLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHL 425 ++ G + + ++++ L + + V ++ G++ + L+ H + + L Sbjct: 623 VINDTLGHHVGDELLIEVANRLRDGVRDSDVVARVGGDEFVIMLSGVEHTSAVAMVAEKL 682 Query: 426 -----KQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQR 480 + ++ + P IG++ I + N A + A N + Sbjct: 683 VFSVGQSYQIGGYDLYSTPSIGIAIYPTDGEDGDILM----KNADAAMYHAKMAGRNNFQ 738 Query: 481 RGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDVYH--EILLRMKGENDEL 538 + +++ + L++AL + F L QP+ + + E L+R L Sbjct: 739 FFDAKMNEAALERLNTEHALRRALANQEFCLYYQPVIDLASNRVASLEALIRWNHPEKGL 798 Query: 539 ISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRA-KMPAHRFAINLSPTSVCQARFPV 597 + P F+ +A E GL + WV+ + +A+ A + + +N+S + P+ Sbjct: 799 LLPGKFIGIAEETGLIQPLGEWVLWAACRQLADFAAAGISGIKMGVNISAIQMRNGNLPL 858 Query: 598 EVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYAR 657 ++ Y I+ LIFE+TES A+ + L L +G +AIDDFGTGY+S + Sbjct: 859 LARGVIEAYDIDPRNLIFEITESVAMEQPTETVRILDLLNAMGVSVAIDDFGTGYSSLSY 918 Query: 658 LKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSL 717 L+ + LK+D SF+ I I + LA ++ VVAE VE + + + S Sbjct: 919 LRMFPINHLKLDRSFVEQIGEEIDGCVICDATIGLAHSLELKVVAEGVETQAQLDYLRSR 978 Query: 718 GIDYMQGYLIGKPQPLIDTLNEIE 741 G D +QG+L +P P + L I Sbjct: 979 GCDMVQGFLFSRPVPADEVLAFIR 1002 >UniRef50_B8GT56 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Chromatiales RepID=B8GT56_THISH Length = 958 Score = 536 bits (1381), Expect = e-150, Method: Composition-based stats. Identities = 125/472 (26%), Positives = 220/472 (46%), Gaps = 37/472 (7%) Query: 293 TQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRDA- 351 + I + L+ ++ + V T R + R++ A D + L N + L A Sbjct: 489 SAAPIRDRNGLILGVVLVFHDVSKT--RQMARQLSWQATHDALTGLFNRYEFEQRLAQAL 546 Query: 352 -------PWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGND 404 A+ Y+ + +++ G + ++L++ L + + + +L G++ Sbjct: 547 AQARDRLAHHAVLYMDLDQFKVVNDTCGHSAGDELLKQLAYLLMGKVRESDTLARLGGDE 606 Query: 405 LALRLNTES---HQERITALDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGE 461 + L +E L ++ FRF W G Q I + + L L E Sbjct: 607 FGVLLENCPLDKAREIAQELRQTVRDFRFSWKGKSFQIGISIGLVMISDG----NLDLAE 662 Query: 462 LNTVAELSIVTNAPENMQRRGAMYLQRELKDK----VAMMNRLQQALEHNHFFLMAQPIT 517 + + A+++ R + + + + +NR+ AL H+ F L Q I Sbjct: 663 VLSAADMACYAAKDLGRDRIHVYHAEDADLQRRHVEMQAINRITDALTHDRFVLYTQRIV 722 Query: 518 GM------RGDVYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAE 571 G + EILLRM E +L+ P +F+P A + L +ID WVI MA+ Sbjct: 723 ATGAAGPDDGGEHMEILLRMVDEKGDLVPPGAFIPAAERYDLMPAIDRWVIRRFFSTMAQ 782 Query: 572 N----------RAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESN 621 + +AIN+S S+ F V++ L ++I + FE+TE+ Sbjct: 783 HIREECGVDGSGGSASGCLYAINISGASINDETFLGFVTEQLETHRIPPTAICFEITETA 842 Query: 622 ALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSL 681 A+ N+ +A + L++ GC+ ++DDFGTG +S+ LKN+ D LKIDGS +++IVS+ + Sbjct: 843 AIANLTRAMNLINELRKRGCRFSLDDFGTGVSSFGYLKNLPVDYLKIDGSLVKDIVSDPI 902 Query: 682 DYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPL 733 D +V +I + ++ + VAE+VEN+EI ++ LG+DY QGY I +P+PL Sbjct: 903 DRAMVDAINRIGQVMGIHTVAEFVENDEILASLRELGVDYAQGYGIDRPKPL 954 >UniRef50_B0C6M6 PAS sensor diguanylate cyclase/phophodiesterase, putative n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C6M6_ACAM1 Length = 935 Score = 535 bits (1380), Expect = e-150, Method: Composition-based stats. Identities = 125/449 (27%), Positives = 223/449 (49%), Gaps = 25/449 (5%) Query: 306 SFIVNYMAV--LATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL--------RDAPWSA 355 Y + T ++ +++ A D + L N R L + A Sbjct: 488 GVFCGYRGIGRDITEAHSLSQQLTHQATHDSLTGLVNRREFEHQLGQIIEEKQSNPIQHA 547 Query: 356 LCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQ 415 LC+L + +++ G + ++++ L + + + +L G++ L L S + Sbjct: 548 LCFLDLDQFKIVNDTVGHLAGDALLKQVADLLQAHIRQTDILSRLGGDEFGLLLKNCSLE 607 Query: 416 ER---ITALDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVT 472 + L S L QFRF W+G + + + + +++ LL + A+++ + Sbjct: 608 KARIVTENLISELSQFRFIWEGQLFKIGASIGIVPITADTDNLTLLFAK----ADVACYS 663 Query: 473 NAPENMQRRGAMYLQR----ELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD----VY 524 R + Q E ++ + +++ALE + F L QPI + + V Sbjct: 664 AKDRGRNRVHLYHAQAQGVTEQHSELMQVATIRKALEESRFRLYYQPIVPLDTETKIPVC 723 Query: 525 HEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAIN 584 +EILLR++ + +++SP+SFLP A +GL ID WVIE+ L R +IN Sbjct: 724 YEILLRLQDTDGKILSPNSFLPAAERYGLMLEIDKWVIENVLIKYGAYFQSQENTRISIN 783 Query: 585 LSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIA 644 LS +S+ + L K Q+E ++ FE+TE+ A++N KQA ++ ++E GC A Sbjct: 784 LSGSSLDDDALLDFIQTQLNKTQLEPHKICFEITETVAISNFKQAIQCIEKIKEFGCHFA 843 Query: 645 IDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEY 704 +DDFG+G++S++ LK D LKIDGS +R++V ++ +V++I + R + +AE+ Sbjct: 844 LDDFGSGFSSFSYLKRFPIDYLKIDGSLVRDMVEDATHQVMVSAINQICRAMHIKTIAEF 903 Query: 705 VENEEIREAVLSLGIDYMQGYLIGKPQPL 733 VEN + A+ +G+DY+QGY +GKPQPL Sbjct: 904 VENGDTIVALEQIGVDYLQGYAMGKPQPL 932 >UniRef50_Q31GA6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31GA6_THICR Length = 815 Score = 535 bits (1379), Expect = e-150, Method: Composition-based stats. Identities = 111/444 (25%), Positives = 191/444 (43%), Gaps = 21/444 (4%) Query: 316 ATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL--------RDAPWSALCYLRIPGMEML 367 T ++ IQ LA+ DP+ LPN R L L R AL ++ + + L Sbjct: 372 VTERKKAEEAIQNLAFYDPLTQLPNRRLLQDRLQQEMAVTERSKHVCALMFIDLDDFKTL 431 Query: 368 VKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRL--------NTESHQERIT 419 G + ++++ L + + V ++ G++ L L + +H E + Sbjct: 432 NDTLGHDTGDKLLRQVATRLRENVREFDTVARIGGDEFVLILPSLDDDWKDAATHAELVA 491 Query: 420 ALDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQ 479 + + D P + + LL + + N Sbjct: 492 QKVLRVLNKPYLLDSTPYHSTPSIGVKLFSGHQETLEELLKHADLA--MYQAKAKGRNTV 549 Query: 480 RRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDV-YHEILLRMKGENDEL 538 R +Q + K M ++QA+ F L QP G + E L+R + L Sbjct: 550 RFYDTTMQEVVNAKSVMEASMRQAITGQQFVLFYQPQINSNGQIIGAEALVRWRHPQKGL 609 Query: 539 ISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAK--MPAHRFAINLSPTSVCQARFP 596 I+P+ F+P+A E G SI WV++ + + E + A+N+S Q Sbjct: 610 IAPNKFIPLAEENGFILSIGRWVLQTACEQLVEWARQPATAQITMAVNVSARQFHQIDLV 669 Query: 597 VEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYA 656 EV +++ + L E+TES + +++ +Q L++LG ++DDFGTGY+S A Sbjct: 670 EEVERIICQTGANPQLLKLELTESLLVKDIEDVVDKMQALKKLGVSFSLDDFGTGYSSLA 729 Query: 657 RLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLS 716 LK + D LKID +F+R+I+ +S D I ++ LA+ + V+AE VEN E + ++ Sbjct: 730 YLKRLPLDQLKIDQTFVRDIIDDSNDAAIARAVIALAKSMEFNVIAEGVENIEQHQMLID 789 Query: 717 LGIDYMQGYLIGKPQPLIDTLNEI 740 +G QGYL G+P P+ + Sbjct: 790 MGCRVFQGYLFGRPVPIEEFFQNT 813 >UniRef50_C6X9G9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X9G9_METSD Length = 984 Score = 535 bits (1378), Expect = e-150, Method: Composition-based stats. Identities = 105/501 (20%), Positives = 206/501 (41%), Gaps = 27/501 (5%) Query: 255 MWGAMRYGYKLISLLWAVVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAV 314 +W A+ + W + + Y + T + + V +++ + + Sbjct: 489 IWKALTREGRWRGEFW---------NQRKNNEQYAEWVTLTAVNNEEGKVINYVGVFADI 539 Query: 315 LATRQRAVVRRIQRLAYVDPVVHLPNVRALNR--------ALRDAPWSALCYLRIPGMEM 366 + + R+ L DP+ LPN R ++ A R+ AL ++ + + Sbjct: 540 --SEIKHSQSRLNELVNRDPLTGLPNRRLMHELLDHAIKYAEREQNEIALLFVDLDRFKA 597 Query: 367 LVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHL- 425 + G + + ++S + + + V +L G++ + ++ +E + + Sbjct: 598 INDTLGHQMGDKLLFEVSQRIRAAVRDSDAVARLGGDEFIVMMDVLREREDAAKVAKKII 657 Query: 426 --KQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGA 483 Q F DG + V + L+ + + V N +N + Sbjct: 658 SSLQNEFLIDGRELFISASVGISVYPDDSLDVDGLIKAADIA--MYQVKNKGKNNHCFYS 715 Query: 484 MYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISP 541 L + ++ + N+L++AL + F + Q + + E L+R ++SP Sbjct: 716 ADLSQNAVERFTLENQLRRALARDQFEVYYQAQVSLETGRIIGAESLIRWIHPELGVVSP 775 Query: 542 DSFLPVAHEFGLSSSIDMWVIEH-TLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVS 600 F+P+A E GL I WV+ +Q + ++N+S + ++ F V Sbjct: 776 AKFIPLAEETGLIIPIGEWVLRQSAMQVKEWHDQGFDIDWVSVNVSGVQIQRSNFADTVY 835 Query: 601 QLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKN 660 +L + E+ L E+TES + N + ++ LG ++AIDDFGTGY+S + LK Sbjct: 836 GILVETDCESHLLELEITESTVMHNTEYVIDVFDRIKHLGVRLAIDDFGTGYSSLSHLKR 895 Query: 661 VNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGID 720 + D +KID SF+R++ +NS D I +I +A+ V+AE VE + + +G Sbjct: 896 LPLDKIKIDQSFVRDLPNNSDDAAIATAINAMAQSLGFTVIAEGVETRQQASFLKKIGCQ 955 Query: 721 YMQGYLIGKPQPLIDTLNEIE 741 QGYL +P + + Sbjct: 956 QGQGYLYSRPVTASEFTALLR 976 >UniRef50_C5D2J8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacillus sp. WCH70 RepID=C5D2J8_GEOSW Length = 568 Score = 535 bits (1378), Expect = e-150, Method: Composition-based stats. Identities = 108/510 (21%), Positives = 213/510 (41%), Gaps = 32/510 (6%) Query: 254 MMWGAMRYGYKLISLLWA-----VVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFI 308 + + + + +W V I + + +Y + T + + +++ Sbjct: 62 RILQSGMHDKQFYKKMWNDIKQHGVWKGEIWNKRKDGELYLEWLTISVVKDQKGNMTNYV 121 Query: 309 VNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALR--------DAPWSALCYLR 360 + + T + V ++ RLA D + ++PN L + L AL +L Sbjct: 122 AMFSDI--TEHKRNVEQLTRLALYDTLTNVPNRYLLEKRLESIIRMSKKHNQSFALLFLD 179 Query: 361 IPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITA 420 + + + G + ++ + L +L + + + G++ + L H Sbjct: 180 LDRFKNINDTLGHRVGDMLLKETAQRLKRMLRKQDTIARFGGDEFVIILPNLKHIREAAY 239 Query: 421 LDSHL-----KQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAP 475 + + + F F + + IG+S L +A+ ++ A Sbjct: 240 MAEKIVESLKRPFCFNHQEIYISTSIGISVYPYDGTDKET------LIRMADRAMY-QAK 292 Query: 476 ENMQRRGAMY---LQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDVY--HEILLR 530 +N + + A+Y + K + L++ALE F L QP ++ E L+R Sbjct: 293 KNGRNQYALYHAGMHGNGKQLFQLETALRKALERGEFELYYQPQLDIKTKQIRAVEALIR 352 Query: 531 MKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSV 590 ISP F+P+A E GL + I W++ + + + + + P + +IN+SP Sbjct: 353 WNHPEKGFISPGMFIPLAEESGLITPISDWIMMQACEHLKQLQLRFPYVKMSINISPIYF 412 Query: 591 CQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGT 650 Q F ++ + + + + E+TES + + +Q+ L L+ +G IAIDDFGT Sbjct: 413 QQIDFLKKLQKTIESVNVNPRLIELELTESAVMPHAEQSVERLTKLKTMGMSIAIDDFGT 472 Query: 651 GYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEI 710 G++S + L D+LKID SF + + D IV +I +A ++ VVAE VE ++ Sbjct: 473 GFSSLSYLHRFPIDILKIDRSFTKQLSRYQQDSAIVKAIIMMAHSLQIRVVAEGVETKKQ 532 Query: 711 REAVLSLGIDYMQGYLIGKPQPLIDTLNEI 740 + + D++QGY + KP + + + Sbjct: 533 YQILEKQSCDFVQGYYVSKPLSISELYEFL 562 >UniRef50_C6P464 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P464_9PROT Length = 1347 Score = 534 bits (1376), Expect = e-150, Method: Composition-based stats. Identities = 122/522 (23%), Positives = 211/522 (40%), Gaps = 26/522 (4%) Query: 242 STNYTLSLLLPL--MMWGAMRYGYKLISLLWA-----VVLMISIHSYQNYIPIYPGYTTQ 294 + YT S LL + + R +WA + + + IYP + Sbjct: 823 ISGYTESELLGQNPRILNSGRQSRDFYRKMWANIKEAGSWQGELWNRRKNGEIYPTWLAV 882 Query: 295 LTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNV--------RALNR 346 + + ++ + ++ R + LA+ DP+ LPN AL + Sbjct: 883 SAVRNDQGKATHYVGISSDL--SQLRQTEAEREHLAHYDPLTDLPNRLLLRSHLTHALAQ 940 Query: 347 ALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLA 406 A R + YL + + + + G + + L+ L+ + + + +L G++ Sbjct: 941 AKRHHNQVGVLYLDLDRFKNINDSLGYQVGDELLVTLTERLTMHMRSEDLLARLGGDEFL 1000 Query: 407 LRLNTESHQER----ITALDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGEL 462 L L + E +L L Q + + + + L+ Sbjct: 1001 LVLEHINEPEDSAIVARSLLETLAQPFVLHGEREIFIGASIGISIFPNDGDSAEQLIQHA 1060 Query: 463 NTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD 522 + A + N L R + + + NRL+ A+ N + QP + Sbjct: 1061 D--AAMHQAKTLGRNTYHFYTEDLSRASNEHLELENRLRHAITANQLRVYYQPQVDIATG 1118 Query: 523 --VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTL-QFMAENRAKMPAH 579 + E L+R + L+ P F+P+A E GL +I WV++ T Q M A +P Sbjct: 1119 HIIGAEALVRWQDPERGLVQPGQFIPLAEETGLIGAIGEWVLKETCLQGMRWIDAGLPFL 1178 Query: 580 RFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQEL 639 A+NLSP + +S++LA+ A +L E+TES + + L L+ Sbjct: 1179 TLAVNLSPHQFLRGNIAGLISKVLAETGFPADRLELELTESALMQQGEDVIKMLHLLRAQ 1238 Query: 640 GCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKML 699 ++AIDDFGTGY+S + LK D+LKID SF+ +I + D +I A+I + + Sbjct: 1239 DIRLAIDDFGTGYSSLSYLKRFPLDILKIDKSFVDDIPFHQDDMEIAATIIAMGHILGFK 1298 Query: 700 VVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIE 741 V+AE VE E E + + G D QGYL P P + ++ Sbjct: 1299 VLAEGVETREQLEFLQARGCDLYQGYLTSPPIPAEEFEKLLK 1340 >UniRef50_A4G3M6 Putative two-component response regulator n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G3M6_HERAR Length = 818 Score = 534 bits (1376), Expect = e-150, Method: Composition-based stats. Identities = 112/477 (23%), Positives = 206/477 (43%), Gaps = 21/477 (4%) Query: 276 ISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVL--ATRQRAVVRRIQRLAYVD 333 + + +Y ++ ++ +S + +++ VL T+ + ++ A D Sbjct: 336 VLLRNYHKDGSMFLNELYIAPVSDTSG---GAVGHFVGVLYDVTQIKRYQEDLEHQANYD 392 Query: 334 PVVHLPNV--------RALNRALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSH 385 + L N +AL +A R + +L ++ + +++ + G + + Sbjct: 393 TLTGLANRNLLNERTQQALLQARRHDHFLSLVFIDLDNFKLVNDSMGHGAGDELIANVGS 452 Query: 386 WLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLKQF---RFFWDGMPMQPQIG 442 L + G+ V ++ G++ L L +S + + ++ + G + Sbjct: 453 RLQTCVRDGDTVARIGGDEFVLLLTNQSVSDSNAGVMQRIQAELIKPMWIRGQEIVVTCS 512 Query: 443 VSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQ 502 + LL +T + ++ N + + +++++ + L Sbjct: 513 MGVARFPEDGEDSESLLANADTA--MYRAKSSGRNNFQFYTKEMNATSGERLSLESDLWH 570 Query: 503 ALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMW 560 AL+++ FL+ QP +R + E L+R + LI+P F+P+A GL I +W Sbjct: 571 ALKNDELFLVYQPQIDLRDGTVIGMEALIRWQHPKRGLIAPMDFIPMAECNGLIIPIGIW 630 Query: 561 VIEHTLQF-MAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTE 619 V+E + + + +P R AINLS + F V ++ ++ L EVTE Sbjct: 631 VLETACRHNLQLQKEGLPPIRVAINLSARQLSDRNFVESVQSVIEAIGLDPHYLELEVTE 690 Query: 620 SNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSN 679 S + NV+ +TL L ++G Q+++DDFGTG++S A LK D LKID SFI N S+ Sbjct: 691 SMVMHNVEDVVVTLNDLNKMGIQLSLDDFGTGFSSLAYLKRFPIDRLKIDQSFIFNCDSD 750 Query: 680 SLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDT 736 D I +I LA K+ V+AE VE E + G D QGY I +P D Sbjct: 751 PGDAIIAQTIIALAHGLKIKVIAEGVEKSEHLSFLKKNGCDEGQGYFISRPLTFDDL 807 >UniRef50_A1TLA6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Acidovorax RepID=A1TLA6_ACIAC Length = 1120 Score = 534 bits (1376), Expect = e-150, Method: Composition-based stats. Identities = 122/510 (23%), Positives = 208/510 (40%), Gaps = 42/510 (8%) Query: 264 KLISLLWAVVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVV 323 L++ L + Y Y T + I V + + T ++ Sbjct: 615 AWQPLVYEETLTFAEDGYAGYFE-----TIKTPIRDMHGHVTGLLSVSRDI--TDRKKAE 667 Query: 324 RRIQRLAYVDPVVHLPNVRAL--------NRALRDAPWSALCYLRIPGMEMLVKNYGIML 375 ++I+ LA+ D + LPN R L R+ AL ++ + + L G + Sbjct: 668 QQIELLAFFDALTGLPNRRLLLDRLQRAGAACQRNEKLGALLFIDLDNFKDLNDTLGHDM 727 Query: 376 RIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHL---------- 425 + +++ L + + V + G++ + L + AL + Sbjct: 728 GDRLLVQVAQRLQECVRTSDTVARFGGDEFVVMLEGLDADTALAALQAEQVAEKLLAQLN 787 Query: 426 KQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIV--TNAPENMQRRGA 483 + F P IG++ + EL A+L++ A N QR Sbjct: 788 RPFEMGAQQHYSTPSIGITLF------GDQRRTVDELLKRADLAMYQAKAAGRNTQRFFD 841 Query: 484 MYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDV-YHEILLRMKGENDELISPD 542 +Q ++ + + + L+Q + + + QPI + E L+R + LISP Sbjct: 842 PDMQAQVTARSQLESDLRQGIARHELTVHLQPIVDGSTRLCGAEALVRWRHPVKGLISPA 901 Query: 543 SFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAK--MPAHRFAINLSPTSVCQARFPVEVS 600 F+P+A E GL + V++ + + + A+N+S Q F EV Sbjct: 902 DFIPLAEETGLILPLGRQVLQTACEQLVRWATHPATASFTIAVNVSARQFRQPDFVAEVL 961 Query: 601 QLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKN 660 LA +L E+TES L +V+ + L+ +G A+DDFGTGY+S + LK Sbjct: 962 GTLAGTGANPQRLKLELTESLLLGDVEDTICRMAQLKRVGVGFALDDFGTGYSSLSYLKR 1021 Query: 661 VNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGID 720 + DL+KID SF+R+++++ D IV +I LA+ + VVAE VE + G + Sbjct: 1022 LPLDLVKIDQSFVRDVLTDPNDAAIVRTILALAKSLDLQVVAEGVETAGQLSFLKLHGCE 1081 Query: 721 YMQGYLIGKPQPLIDTLNE------IEPIR 744 QGYL G+P PL E +EP R Sbjct: 1082 GFQGYLFGRPVPLEAFEREHDLPVAVEPSR 1111 >UniRef50_Q1K3I2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K3I2_DESAC Length = 791 Score = 534 bits (1376), Expect = e-150, Method: Composition-based stats. Identities = 110/480 (22%), Positives = 201/480 (41%), Gaps = 36/480 (7%) Query: 286 PIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVR--RIQRLAYVDPVVHLPNVRA 343 P+Y + I +S + +L + + +Q + D + HLPN Sbjct: 321 PLYNEDHSIRGIIETSR-------DLTDILNSEAELNEKTQHLQFVTTHDQLTHLPNKEL 373 Query: 344 LNRALRDAPW--------SALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGE 395 L A + +AL ++ + + + + G + Q Q+++ LS + + Sbjct: 374 FFDRLERATFKTHRSPFFTALLFIDLDRFKHINDSLGHEIGDQLLQEVAKRLSTSIRKTD 433 Query: 396 DVYQLSGNDLALRLNTESHQERITA-----LDSHLKQFRFFWDGMPMQPQIGVSYCYVRS 450 + ++ G++ + + ++ +D+ L F + + P +G+S Sbjct: 434 TLARMGGDEFLIIIEDIKELSHVSTVAKNFIDTILPSFTIDGHELFITPSMGISIAPTD- 492 Query: 451 PVNHIYLLLGELNTVAELSIVTNAPENMQ--RRGAMYLQRELKDKVAMMNRLQQALEHNH 508 EL AE+++ + + K ++ + + L++A+ + Sbjct: 493 -----TQHPKELLAFAEIAMYQAKGLGGNKCQFYTAEMNSRAKTRIELESYLRKAVNQDQ 547 Query: 509 FFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTL 566 F L QP ++ V E LLR + +ISP+ F+P+A E G+ I WV++ Sbjct: 548 FVLYYQPQFDIQSGELVGCEALLRWQHPQMGMISPNDFIPLAEETGVIIEIGEWVLQEAC 607 Query: 567 -QFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTN 625 Q A R A+N+SP + F + +++ I+ L E+TES + + Sbjct: 608 LQNKKWQDAGHSPIRVAVNISPRQFREPGFLEMIERVVQTTGIKPEWLELEITESLLMDD 667 Query: 626 VKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQI 685 + A L+ L+ G +AIDDFGTGY+S + LK LKID SF+R+I ++ D I Sbjct: 668 IDSAINILKQLKAKGIHLAIDDFGTGYSSLSYLKRFPLSRLKIDRSFVRDITTDDNDASI 727 Query: 686 VASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQ---PLIDTLNEIEP 742 ++ LA + VVAE +E +E + G + QGYL P P + P Sbjct: 728 TKAVIALAHSMNLKVVAEGIETQEQLLFLKEKGCEVGQGYLYSPPVAKEPFDHFFTDGSP 787 >UniRef50_B1XZW3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=7 Tax=cellular organisms RepID=B1XZW3_LEPCP Length = 1069 Score = 534 bits (1376), Expect = e-150, Method: Composition-based stats. Identities = 112/468 (23%), Positives = 193/468 (41%), Gaps = 19/468 (4%) Query: 288 YPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVR----- 342 YP + + + V ++ + + T ++ RRI+ LA D + LPN Sbjct: 585 YPAWLLANAVRDRAGHVSHWVCTSIDI--TDRKESERRIRFLAEHDVLTELPNRALCIER 642 Query: 343 ---ALNRALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQ 399 AL +A R A+ ++ + + + + G + + ++ L + G+ V + Sbjct: 643 LRLALQQARRTGQKVAVLFIDLDRFKNINDSLGHHVGDGLLRSVAQRLVDGVRAGDTVSR 702 Query: 400 LSGNDLALRLNTESHQERITAL--DSHLKQFRFFW--DGMPMQPQIGVSYCYVRSPVNHI 455 L G++ + LN + E + + + + R G + V I Sbjct: 703 LGGDEFVVVLNGLADIEEVAHVVEQRLIPRVRQPHGVQGAEIHVSCSVGISVFPDDAQDI 762 Query: 456 YLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQP 515 L+ + + + N + + + + ++ + N L+ A+ L QP Sbjct: 763 DELMRQADVA--MYQAKAQGRNGAQFFTAEMNQRAQARLMVENHLRSAVAQGQLSLHYQP 820 Query: 516 ITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENR 573 + E LLR + PD F+PVA E GL I WVIE + R Sbjct: 821 RIHVADGRVAGVEGLLRWHSPELGHVPPDRFIPVAEETGLIIEIGAWVIEAACAQIERWR 880 Query: 574 -AKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQIT 632 + +INLS + + L ++ + QL E+TES + V +T Sbjct: 881 GQGLQEVAVSINLSALQLRDPGLLDVLRASLERHAVPPGQLELELTESILMDQVDAHLVT 940 Query: 633 LQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHL 692 L L+ELG +++IDDFGTGY+S L D LKID SF+R+++ + D I+ +I L Sbjct: 941 LHALRELGLRLSIDDFGTGYSSLNYLTRFPIDQLKIDRSFVRDMLDDPRDLAIIKAIIGL 1000 Query: 693 ARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEI 740 + VVAE VE E +A+ + G D +QGY +P + Sbjct: 1001 GHTLGLKVVAEGVERELEVQALRAAGCDELQGYHFARPMAADTATAWL 1048 >UniRef50_Q21WS3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21WS3_RHOFD Length = 1034 Score = 534 bits (1376), Expect = e-150, Method: Composition-based stats. Identities = 120/497 (24%), Positives = 204/497 (41%), Gaps = 32/497 (6%) Query: 266 ISLLWAVVLMISI-----HSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQR 320 +WA +L I HS + ++ I ++ + T+++ Sbjct: 537 YREMWATLLAGDIWHGEFHSRRKDGSLFWEQAAIAPIFDDHGRPIHYLAIKEDI--TKRK 594 Query: 321 AVVRRIQRLAYVDPVVHLPNVRALNRAL--------RDAPWSALCYLRIPGMEMLVKNYG 372 A I+ LA+ D + LPN R LN L R AL ++ + + L G Sbjct: 595 AAEAEIEHLAFYDLLTGLPNRRLLNDRLQQVLAVGTRSRRHGALLFIDLDNFKNLNDTQG 654 Query: 373 IMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITA----------LD 422 Q+++ L+ + + V +L G+D + L S Q+ A LD Sbjct: 655 HEQGDVLLQQVAQRLNFCVRECDTVARLGGDDFVVMLQDLSEQQTEAATQAEGVGQKILD 714 Query: 423 SHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRG 482 + + + F V + + + LL + L +A N R Sbjct: 715 ALHQPYPFGH--FTHHGSASVGVALFNASQDTVEELLKRADLA--LYQAKDAGRNTLRFF 770 Query: 483 AMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD-VYHEILLRMKGENDELISP 541 +Q + + M ++ L+ N F L QP G + E L+R + L++P Sbjct: 771 DPDMQAVISARAEMEADMRLGLQENQFLLYYQPQVNHAGRLIGVEALVRWQHPLRGLVAP 830 Query: 542 DSFLPVAHEFGLSSSIDMWVIEHTLQFMAENR--AKMPAHRFAINLSPTSVCQARFPVEV 599 F+P+A + GL + WV+E + + R A A+N+S F +V Sbjct: 831 AHFIPLAEDTGLILPLGQWVMEAACRQLQLWRTQAHTAQLTIAVNVSALQFHGESFVSDV 890 Query: 600 SQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLK 659 LA+ A +L E+TES + +V + L+ G ++DDFGTGY+S + LK Sbjct: 891 LATLARTGAPADRLKLELTESLLVKDVDGVIAKMVALKAHGVGFSLDDFGTGYSSLSYLK 950 Query: 660 NVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGI 719 + D +KID SF+ + +SN D +V + + R M+V+AE VE + R+ + G Sbjct: 951 RLPLDQIKIDQSFVSDALSNPKDAALVRATVAMGRGLGMMVIAEGVETQMQRDFLEGEGC 1010 Query: 720 DYMQGYLIGKPQPLIDT 736 QGY G+P P+ + Sbjct: 1011 LNFQGYFFGRPVPVAEL 1027 >UniRef50_A3DCG7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Clostridium thermocellum RepID=A3DCG7_CLOTH Length = 862 Score = 534 bits (1376), Expect = e-150, Method: Composition-based stats. Identities = 107/463 (23%), Positives = 196/463 (42%), Gaps = 18/463 (3%) Query: 293 TQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNV--------RAL 344 T I + S ++ +V + T + + + Y DP+ LPN AL Sbjct: 391 TVAPIRNDSDVIIGTVVALKDI--TEIKKKDEILYNMEYYDPLTGLPNRSLFSDRLKMAL 448 Query: 345 NRALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGND 404 ++ R+ AL L + + + G + ++++ + L + V ++ G++ Sbjct: 449 AQSKRNNEMCALIILDLDNFKAINDTLGHSVGDMLLKQVAEKIKGYLREVDTVARIGGDE 508 Query: 405 LALRLNTESHQERIT-ALDSHLKQFRFFW--DGMPMQPQIGVSYCYVRSPVNHIYLLLGE 461 + T A D LK+F+ W +G + + + Sbjct: 509 FIIIQPQIKDINDATRAADRILKKFQQPWILEGKEYYITASMGIGIYPNGGEDPQTIFKN 568 Query: 462 LNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRG 521 +T L N + + +++ ++ + N L++A+E F L QP ++ Sbjct: 569 ADTA--LYRAKELGRNNYQLYTESMNQKVLQRLDIENSLRRAIEKEEFVLFYQPQIDIKT 626 Query: 522 D--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAEN-RAKMPA 578 V E LLR + L+ P F+PVA + GL I WV+E + + + Sbjct: 627 GKIVGFEALLRWYHPDYGLMPPMEFIPVAEDSGLIVVIGEWVLETACRQNKKWIECGLEP 686 Query: 579 HRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQE 638 H ++NLS ++ + ++ + + L E+TES A+ ++ L L++ Sbjct: 687 HLISVNLSARQFQRSNIVEVIDRIRSSTGLAPELLELEITESTAMQDLSFTIDVLNQLRK 746 Query: 639 LGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKM 698 G ++++DDFGTGY+S L+ + D LKID SF+++I +NS + I ++ LA + Sbjct: 747 KGIRVSLDDFGTGYSSLNYLRQLPIDTLKIDKSFVQDIRANSKEEAIAKTVISLAHKLDL 806 Query: 699 LVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIE 741 VVAE VE +E + D QGYL KP P + + Sbjct: 807 TVVAEGVETKEQLLFLKKEKCDKAQGYLFSKPLPAEEIEKMLR 849 >UniRef50_A1ASK8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=A1ASK8_PELPD Length = 858 Score = 533 bits (1375), Expect = e-150, Method: Composition-based stats. Identities = 101/443 (22%), Positives = 189/443 (42%), Gaps = 24/443 (5%) Query: 312 MAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL--------RDAPWSALCYLRIPG 363 + + + ++ +++ LA D + L N + L R A+ L + Sbjct: 256 LDIDISERKINEEQLEYLATHDELTGLANRALFHDRLEQSLHYAKRSGRIVAVLLLDLDR 315 Query: 364 MEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDS 423 +++ + G + ++ L ++ + V +L G++ L L + + + L S Sbjct: 316 FKIINDSLGHSFGDRLLSAVAQRLDRVVRDTDTVARLGGDEFVLLLAEVTEPDDVGLLAS 375 Query: 424 HL-----KQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENM 478 + R + M +G+S S L A++++ E Sbjct: 376 RILHELAVPHRIEGREIVMSASLGISLYPKDSGDGST------LIRNADIAMYRAKQEGG 429 Query: 479 Q--RRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGE 534 A + + + + + + L+ ALE F L QP + E L+R Sbjct: 430 GVFSFYAPEMNQRAMETMEIESALRLALERGEFTLYYQPKVDLASGRISGCEALIRWLHP 489 Query: 535 NDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKM-PAHRFAINLSPTSVCQA 593 +++P F+P+A E GL I WV++ + + +A+ P A+NLS Sbjct: 490 RRGVVAPADFIPLAEETGLIVPIGTWVLKEACRQVRAWQAEGVPIANVAVNLSARQFRTG 549 Query: 594 RFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYA 653 P V ++L + ++ L E+TES + + Q ++ L +G ++++DDFGTGY+ Sbjct: 550 DLPGLVREVLGETGLDPHLLELEMTESMVMADHAQVVAVMEELTAIGVRLSLDDFGTGYS 609 Query: 654 SYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREA 713 S+A L + + LKID SFI+ IV++ I SI +A ++ +AE VE E Sbjct: 610 SFAHLSHFPINHLKIDRSFIKQIVTDPNSATIATSIIAMAHRMRLKAIAEGVETEAQLAY 669 Query: 714 VLSLGIDYMQGYLIGKPQPLIDT 736 + G D +QGYL+ +P P + Sbjct: 670 LRKQGCDEIQGYLLSRPLPASEY 692 >UniRef50_C6P3H7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P3H7_9PROT Length = 912 Score = 533 bits (1375), Expect = e-150, Method: Composition-based stats. Identities = 121/504 (24%), Positives = 211/504 (41%), Gaps = 28/504 (5%) Query: 255 MWGAMRYGYKLISLLWAVVL-----MISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIV 309 + + R+ +W +L + I + +YP + T T+ + V I Sbjct: 402 ILKSGRHDMDFYQAMWNEILGTGKWIGEIWDRRKSGEVYPKWLTINTVFNDDGKVHHRIA 461 Query: 310 NYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRDAPW--------SALCYLRI 361 + + ++++ I R A D + LPN R + L A+ +L + Sbjct: 462 LFTDI--SQKKESEELIWRQANFDHLTGLPNWRMFHDRLEQEIKKSRRVELPLAVVFLDL 519 Query: 362 PGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITAL 421 + + G ++ + LS + + V +L G++ AL L S Q+ I + Sbjct: 520 DHFKEVNDTMGHATGDLLLKEAALRLSSCVRESDTVARLGGDEFALLLGELSDQDSIERV 579 Query: 422 DSHL-----KQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPE 476 + + F+ + + IGV+ S I LL + + N+ Sbjct: 580 NECILNKFSAPFQLGNELAYISVSIGVTI--YPSDATEIEALLRNADQA--MYAAKNSGR 635 Query: 477 NMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDVYH--EILLRMKGE 534 N +Q ++++++ N L +AL + F L+ QPI + H E L+R + Sbjct: 636 NRSCYYTQAMQSVAQNRMSLSNDLHKALAQDQFRLVYQPIVELETGSIHKAEALIRWQHP 695 Query: 535 NDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENR-AKMPAHRFAINLSPTSV-CQ 592 N L+SP F+P+A + GL I WV + R A + +IN SP Sbjct: 696 NRGLVSPADFIPIAEQSGLIIQIGDWVFRQAANQVKHWRGAYGKDIQISINKSPVQFKSD 755 Query: 593 ARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGY 652 + + + L + + E+TES + L +G Q+A+DDFGTGY Sbjct: 756 SNTHLAWFEHLKELDLSGGCFAIEITESLLMDASDTIVSKLMAFGNIGMQVALDDFGTGY 815 Query: 653 ASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIRE 712 +S + LK + D +KID SF+RN+ +S D + ++ +A + V+AE VE E R+ Sbjct: 816 SSLSYLKKFDIDYIKIDQSFVRNLAPDSSDLALCEAMIMMAHKLGIKVIAEGVETSEQRD 875 Query: 713 AVLSLGIDYMQGYLIGKPQPLIDT 736 + + G DY QGYL +P D Sbjct: 876 LLRTAGCDYGQGYLFSRPLSTEDF 899 >UniRef50_C6BWZ0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BWZ0_DESAD Length = 716 Score = 533 bits (1375), Expect = e-150, Method: Composition-based stats. Identities = 115/506 (22%), Positives = 210/506 (41%), Gaps = 23/506 (4%) Query: 255 MWGAMRYGYKLISLLWAVVLM-----ISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIV 309 + + R+ +W + I + + ++P + + IT V ++I Sbjct: 208 ILKSNRHKPSFYKGVWKSIKTNGMWEGEIWNRRKNGEVFPEWISIKAITDVKGEVVNYIA 267 Query: 310 NYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRDAPWS--------ALCYLRI 361 + + + +A R+IQ AY D + LPN L +R A S AL ++ + Sbjct: 268 VFRDI--SEAKASQRKIQHQAYHDALTGLPNRTLLIDRIRKAIASSNDRKSCIALLFIDL 325 Query: 362 PGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITAL 421 + + + G ++ Q+ + + ++ + V ++ G++ + L + + Sbjct: 326 DNFKNINDSLGYVIGDSVLQQAAARIREFIDEKDTVSRIGGDEFVIMLKDLQDKHDAAVM 385 Query: 422 DSHLKQF---RFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENM 478 + + + Y L+ +T ++ N Sbjct: 386 ADTIINLFAQALTVESHQFTITPSIGIALYPEDGKTPYSLVRNADTA--MNKAKQEGRNR 443 Query: 479 QRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGEND 536 L +++M N+L+Q N F + QP + + V E L+R + Sbjct: 444 YHLFTPGLTESALRRISMENQLRQTASDNGFTVYYQPKVNLHDNTIVGMEALIRWIQPDG 503 Query: 537 ELISPDSFLPVAHEFGLSSSIDMWVIEHTL-QFMAENRAKMPAHRFAINLSPTSVCQARF 595 +ISP F+P+A E GL I V+E + N+ + ++NLS Q + Sbjct: 504 TIISPAEFIPLAEETGLIVPIGEQVLEAACLDTVELNQRFGTNLKVSVNLSLRQFKQEQL 563 Query: 596 PVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASY 655 + ++A I L E+TES + +++Q + L+ + +LG ++IDDFGTGY+S Sbjct: 564 MKNIMDIIAMTAICPSCLELEITESTVMDDIEQTKTILEKMDKLGITLSIDDFGTGYSSL 623 Query: 656 ARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVL 715 + LKN+ LKID SF+ + N D ++V +I LAR + VAE +E E + Sbjct: 624 SHLKNMPMHTLKIDQSFVAGLPHNKSDQKLVKAIMSLARSFDLSTVAEGIETPEQYNYMR 683 Query: 716 SLGIDYMQGYLIGKPQPLIDTLNEIE 741 LG + MQGY P PL + IE Sbjct: 684 ELGCEVMQGYYYSPPVPLEEFAALIE 709 >UniRef50_C6X7I8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X7I8_METSD Length = 821 Score = 533 bits (1374), Expect = e-150, Method: Composition-based stats. Identities = 117/478 (24%), Positives = 207/478 (43%), Gaps = 17/478 (3%) Query: 278 IHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVH 337 + +Y+ ++ + + V + T R ++R A D + Sbjct: 338 LRNYRKDGSLFWNELYVAPVPDPHGGEPRYFVGVQKDI-TEIRQYQEALERQANYDTLTG 396 Query: 338 LPNVRALNRALRDAPWSA--------LCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSP 389 L N L ++ A A + ++ I + + + G + + L L Sbjct: 397 LANRNLLKERMQQAISEARRHNWTFSVAFIDIDNFKRVNDSMGHSAGDELIRLLGQRLQS 456 Query: 390 LLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLKQ---FRFFWDGMPMQPQIGVSYC 446 L G+ V +L G++ L L ++S E I + ++ F G + + Sbjct: 457 CLRDGDTVARLGGDEFVLLLTSQSLDESIHTVVQRIRNTIINPFIITGRQLTVTCSIGLA 516 Query: 447 YVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEH 506 + LL ++ + + N R A + EL ++++ N L ALE+ Sbjct: 517 NFPHDGRNADTLLSNADSA--MYQAKASGSNNFRFYAKEMNAELGHRLSLENDLWHALEN 574 Query: 507 NHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEH 564 L QP MR + E L+R + +I P F+P++ + GL I +WV+E Sbjct: 575 QQLVLHYQPQVCMRNSQIIGMEALIRWQHPKLGMIPPLQFIPLSEDDGLIVPIGIWVMET 634 Query: 565 TLQFMAENR-AKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNAL 623 + + A P R A+NLS + Q + + L ++ L E+TES + Sbjct: 635 AAHQNRQLQLAGYPPIRVAVNLSVRQLEQKDLVHCIEKTLQHSGLDPQCLELEITESMLM 694 Query: 624 TNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDY 683 N++++ ITL + +LG Q+++DDFGTGY+S + LK + + LKID SFI +I + D Sbjct: 695 HNIEESIITLNRISDLGVQLSLDDFGTGYSSLSYLKRLPINRLKIDKSFINDITTTYNDA 754 Query: 684 QIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIE 741 I SI LA ++ V+AE VE+ + +L G D +QGYL+ +P+P + + Sbjct: 755 IIARSIIALAHSLEIQVIAEGVESADQYAFLLENGCDEVQGYLLSRPRPFEEMEALLR 812 >UniRef50_B3PHI4 Sensory box/GGDEF family protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PHI4_CELJU Length = 595 Score = 533 bits (1374), Expect = e-149, Method: Composition-based stats. Identities = 103/461 (22%), Positives = 185/461 (40%), Gaps = 18/461 (3%) Query: 292 TTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNV--------RA 343 T++ + + + + + T ++ +IQ LA D + LPN A Sbjct: 118 TSKFPVFNDTGKTIGLVGIGRDI--TERKQSEEQIQYLATHDSLTALPNRFMFSKLLAVA 175 Query: 344 LNRALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGN 403 + A R A+ ++ + + + G Q +++ L + V +L G+ Sbjct: 176 IESARRHQRQLAVLFIDLDRFKNINDTLGHDAGDQLLITMANRFRTCLRTSDIVGRLGGD 235 Query: 404 DLALRLNT-ESHQERITALDSHLKQF--RFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLG 460 + + L ESH + L G + + C L+ Sbjct: 236 EFVILLPELESHDQAARVAQKILSAAIQPLDVHGQECRVTASIGICLYPEDAEDEQALMK 295 Query: 461 ELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMR 520 + + +N + + L+ +++ + N L++ALE + FFL Q ++ Sbjct: 296 NADIA--MYRAKEEGKNNYQFYSPDLKVRSLERLMLENNLRKALERHEFFLHYQAKRNLK 353 Query: 521 GD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQF-MAENRAKMP 577 E L+R + ISP F+P+A E GL + WV+ + + +P Sbjct: 354 TGKIAGVEALVRWQHPELGTISPAHFIPLAEETGLIVHLGRWVLRAACTQGVIWQQQGLP 413 Query: 578 AHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQ 637 A+NLS +++ L + + L E+TE + + ++A L ++ Sbjct: 414 PICIAVNLSARQFFDDNLINDIANALRESGLAPELLEMEITEGMIMQDAERAIRILTGIK 473 Query: 638 ELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKK 697 LG ++AIDDFG GY+S A +K D LK+D SFIR+I +N D I +I + + Sbjct: 474 ALGVRLAIDDFGVGYSSLAHIKRFPIDTLKVDSSFIRDIPANREDRAITEAIIAMGKTLS 533 Query: 698 MLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLN 738 + V+AE VE +E + D QGY KP + Sbjct: 534 LTVIAEGVETQEQENFLRDSACDQTQGYYFSKPVSPEEFTR 574 >UniRef50_Q1H3Y9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H3Y9_METFK Length = 858 Score = 533 bits (1374), Expect = e-149, Method: Composition-based stats. Identities = 112/487 (22%), Positives = 214/487 (43%), Gaps = 18/487 (3%) Query: 269 LWAVVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQR 328 +W + I Q Y +P T T+T V +I + + + ++A RI Sbjct: 375 VWQGEAL--IKHKQGY--TFPVALTITTVTGEDGRVECYINTFSDI--SERKANEARIHD 428 Query: 329 LAYVDPVVHLPNVRAL----NRALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLS 384 LA+ D + LPN +L L + + L + +++ G + Q +++ Sbjct: 429 LAHTDTLTGLPNRMSLYSGLEERLANVQPIGVMILDLDNFKIINDTLGHHVGDQLLVEVA 488 Query: 385 HWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLKQF---RFFWDGMPMQPQI 441 L + V +L G++ + L+ + + + + Q + +G + Sbjct: 489 RRLVCCVGEQGMVARLGGDEFVIVLDCPQATQIVGRVAKEVLQRLAQPYLIEGYELHSSS 548 Query: 442 GVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQ 501 + + Y LL ++T + ++ +N + ++ ++ +++ M N L+ Sbjct: 549 SIGIGVSPHDGSDPYSLLKNIDTA--MYAAKSSGKNNFKFFTEKMREQINERMQMENHLR 606 Query: 502 QALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDM 559 QA+ N F L QP + + E L+R ++ P+ F+ VA E L + Sbjct: 607 QAILRNEFELHYQPQVDLGTGRIIGMEALVRWNHPEWGMVHPEKFIRVAEECNLVIPLGE 666 Query: 560 WVIEHTLQFMAEN-RAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVT 618 WV+ + +++ R + A ++N+S + + L+ +QI+ L E+T Sbjct: 667 WVLCEACRQISQWSRQGLEAVCISVNISARQLKSRYLFTLIDNLMMTHQIKPGMLELEIT 726 Query: 619 ESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVS 678 ES + + +Q ++ L+ G +AIDDFGTGY+S + LK + LKID SF+++I + Sbjct: 727 ESAVMDDPEQTIPRMKELKNKGVALAIDDFGTGYSSLSYLKLLPLTRLKIDRSFVKDIET 786 Query: 679 NSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLN 738 + D I A+ LAR + +VAE VE E E + + G D QGY KP P + + Sbjct: 787 DPNDAAICAATIALARTLGLGLVAEGVETEAQLEYLRAQGCDSAQGYYFSKPLPANNIMA 846 Query: 739 EIEPIRE 745 + ++ Sbjct: 847 FVSRHQQ 853 >UniRef50_B8GTY7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GTY7_THISH Length = 808 Score = 533 bits (1374), Expect = e-149, Method: Composition-based stats. Identities = 116/467 (24%), Positives = 220/467 (47%), Gaps = 16/467 (3%) Query: 284 YIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVR- 342 Y T + + ++ + + R++ A D + L N R Sbjct: 336 DGESYAVRLTASPLRDGEDGISGAVLVLHD--FSMLWDMARQLSHQARHDALTGLINRRE 393 Query: 343 -------ALNRALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGE 395 AL A R + ALCY+ + +++ G + + ++L+ L + + Sbjct: 394 FEDRVREALESARRSSRSHALCYIDLDQFKVVNDTCGHVAGDELLRQLAAALPRHIRDTD 453 Query: 396 DVYQLSGNDLALRLNTESHQERIT---ALDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPV 452 + +L G++ L L ++ L + + + RF W G + + + Sbjct: 454 TLARLGGDEFGLLLENCPLDRALSICHQLLAEVAELRFMWQGRRFDVGMSIGLVAIDGAS 513 Query: 453 NHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLM 512 + +L E ++ ++ R + ++ + R+++A+E F L Sbjct: 514 ASLSEVLSEADSACYVAKEQGRNRVYVSRPGDQALKTRFGEMEWLGRIREAMEEERFELY 573 Query: 513 AQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMA 570 QPI + G+ + EILLR+K E+ L+ P +F+P A + L +D VI +A Sbjct: 574 CQPIRPISGEGVPHFEILLRLKAEDGSLVEPGAFIPAAERYNLMPQVDRHVIRSVFAMLA 633 Query: 571 ENRAKMPAHR-FAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQA 629 ++ + H INLS S+ Q V++ L Y + A + FE+TE+ A+ N+ A Sbjct: 634 DSDFALKQHAIVGINLSGQSLGQEDLLDFVTEALHYYGLPAHRFCFEITETAAIANLSSA 693 Query: 630 QITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASI 689 ++ L+++GC A+DDFG+G +S+ LK++ D LKIDGSF+++++++ +D +V +I Sbjct: 694 AGFIRELRDMGCAFALDDFGSGLSSFNYLKHMPVDYLKIDGSFVQDVLTDPVDAAMVGAI 753 Query: 690 CHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDT 736 + R+ + +AE+VE+E + E + +G+DY QGY IG+P+P D Sbjct: 754 HRIGRVLGVKTIAEFVESEAVLEHLREIGVDYAQGYGIGRPKPFRDC 800 >UniRef50_A1ATC4 Periplasmic sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ATC4_PELPD Length = 876 Score = 533 bits (1373), Expect = e-149, Method: Composition-based stats. Identities = 109/443 (24%), Positives = 191/443 (43%), Gaps = 20/443 (4%) Query: 308 IVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRDA--------PWSALCYL 359 ++ + + ++ + +A+ D + LPN LR A+ YL Sbjct: 412 VICMVLRDISERKRFEGELMHMAHHDALTGLPNRTLFFDRLRQGLYKKERSGKMLAVIYL 471 Query: 360 RIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERIT 419 + +++ G ++++ L ++ + + +L G++ + ++ + Sbjct: 472 DLDRFKIINDTLGHHTGDMLLKEVADRLRGVVRKADTISRLGGDEFTIIIDEIATPADSL 531 Query: 420 ALDSHL-----KQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNA 474 + + FR M + +GV+ + + LL +T + Sbjct: 532 LVAEKILHVFSAPFRLEKHEMFITASMGVTL--YPNDGDTAEKLLKNADTA--MYHAKEE 587 Query: 475 PENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMK 532 N + + + + ++++M L+ AL N F L QP V E L+R + Sbjct: 588 GRNTYQFFSEEMNSRVSERLSMETGLRHALARNEFLLHYQPRVNTTTGRIVGVEALIRWQ 647 Query: 533 GENDELISPDSFLPVAHEFGLSSSIDMWVIEHTL-QFMAENRAKMPAHRFAINLSPTSVC 591 LI PD+F+P+A E GL I WV+ +T Q A A R ++N+S Sbjct: 648 QPQKGLILPDAFIPLAEETGLIIPIGEWVLRNTCTQARAWQEAGFAQMRISVNISCRQFT 707 Query: 592 QARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTG 651 P + +L + ++ L E+TES + N ++A L L+E+G IAIDDFGTG Sbjct: 708 HDNLPDTIRGILRETGLQPSCLELEITESVIMLNPERAISLLNELKEMGISIAIDDFGTG 767 Query: 652 YASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIR 711 Y+S + LK + AD+LKID SF+ I N D +VA+I +L + +VAE VE +E Sbjct: 768 YSSLSLLKRLPADILKIDKSFVSGIPGNKSDETLVATIINLGHNMGLGLVAEGVERQEQL 827 Query: 712 EAVLSLGIDYMQGYLIGKPQPLI 734 + +QGY KP P Sbjct: 828 HFLEERNCQEVQGYYFSKPLPAE 850 >UniRef50_D1U882 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U882_9DELT Length = 958 Score = 533 bits (1373), Expect = e-149, Method: Composition-based stats. Identities = 114/503 (22%), Positives = 214/503 (42%), Gaps = 31/503 (6%) Query: 261 YGYKLISLLWAVVLM-----ISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVL 315 +G + +W + I + + YP + +I + +++ + + Sbjct: 453 HGEEFYGEMWTTLKARGSWHGEIWNRRKNGESYPEILSISSIRDDDGEIANYVAVFHDI- 511 Query: 316 ATRQRAVVRRIQRLAYVDPVVHLPNV--------RALNRALRDAPWSALCYLRIPGMEML 367 + + ++ Y D + LPN AL+ A R A+ +L + + + Sbjct: 512 -SDMKHKEEQLAHHLYHDGLTGLPNRVLVLDRLSMALSHANRTGTKVAVLFLDLDNFKKI 570 Query: 368 VKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHL-- 425 ++G + ++ L L + V + G++ + + + + L L Sbjct: 571 NDSFGHAQGDTLLKAVAERLVALYRDEDTVARQGGDEFLVVVVDVHEEREVVDLAEGLQR 630 Query: 426 ---KQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIV--TNAPENMQR 480 + F + + P IGV+ Y + L+ A++++ N Sbjct: 631 VFEEPFVIKGQEVFITPSIGVTL-YPDDGQDPASLV-----KNADMAMYQSKAKGRNSYF 684 Query: 481 RGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDEL 538 + + ++ + + +++AL+ F + QP + E L+R + + Sbjct: 685 LFTQQMSERIAQRLTLESDMRRALKEREFTVYFQPKVDLASGEVSGLEALVRWVKPDGII 744 Query: 539 ISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRA-KMPAHRFAINLSPTSVCQARFPV 597 +SP+ F+P+A E GL + +V++ + + M + A A+NLSP Q Sbjct: 745 VSPEDFIPMAEETGLIVPLGEFVLDASCKAMQVLQGVGCSALTVAVNLSPIQFGQEDLVE 804 Query: 598 EVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYAR 657 V L + + A +L E+TES +T+V+ + L L ELG I+IDDFGTGY+S Sbjct: 805 MVVANLERNGLPASRLELEITESTLMTDVQSSVAQLNRLVELGITISIDDFGTGYSSLYY 864 Query: 658 LKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSL 717 LKN LKID SFIR+I + D +IV ++ +AR + VVAE VE +E + + + Sbjct: 865 LKNFPISTLKIDRSFIRDITIDDSDAKIVETVVLMARTMGIGVVAEGVETKEQLDLLATF 924 Query: 718 GIDYMQGYLIGKPQPLIDTLNEI 740 G +QGY +P PL + + Sbjct: 925 GCATVQGYYYSRPLPLEKIIEFL 947 >UniRef50_Q1NRJ4 PAS:GGDEF:EAL:GAF n=5 Tax=Deltaproteobacteria RepID=Q1NRJ4_9DELT Length = 1052 Score = 533 bits (1373), Expect = e-149, Method: Composition-based stats. Identities = 118/511 (23%), Positives = 214/511 (41%), Gaps = 28/511 (5%) Query: 254 MMWGAMRYGYKLISLLWAVVLM-----ISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFI 308 + + Y +W +L + S + ++P + + + + ++ Sbjct: 545 RILQSGHYDADFYREMWDTLLTTGHWEGELWSRRKNNELHPKWLSISAVYDQRGRITHYV 604 Query: 309 VNYMAVLATRQRAVVRRIQRLAYVDPVVHLPN--------VRALNRALRDAPWSALCYLR 360 + AT + +++ L + D + LPN +A+ RA R+ AL Sbjct: 605 GISNDLTAT--KQTQEKLEELTHYDQLTSLPNILLFRDRLQQAMARARREEHKVALLIFD 662 Query: 361 IPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITA 420 + + + + G + +++ L L + + + G++ L L + + Sbjct: 663 LDRFKEVNDSLGHSVGDLVLTEVAQRLRQQLSLADTICRPGGDEFYLLLGRLTDIDTAVQ 722 Query: 421 LDSHL-----KQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAP 475 ++ K F+ + + P IG++ + L+ + T + Sbjct: 723 AAQNVLELFSKPFQAADHQLYLTPSIGITLF--PDDGEEVESLIQSVETA--MYHAKKDG 778 Query: 476 ENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKG 533 N + + ++ M NRL++A+E F L QP G V E L+R Sbjct: 779 GNSFQFFQETMFTAALGRMTMKNRLRRAVELEEFELYYQPKIAADGRTVVGAEALIRWVQ 838 Query: 534 EN-DELISPDSFLPVAHEFGLSSSIDMWVIEHTLQF-MAENRAKMPAHRFAINLSPTSVC 591 +SP F+P+A E GL I WV+ + + +A +P R A+NLS Sbjct: 839 PERGGPVSPAEFIPLAEETGLIIPIGEWVLRQACRQSLLWQQAGLPPLRIAVNLSAVQFK 898 Query: 592 QARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTG 651 Q E++ +L + + A L E+TES + +V A TL L+++G +A+DDFGTG Sbjct: 899 QPGLDDEINWILQEIGLPAELLELEITESLLMEDVTTANATLWKLKDMGIHLALDDFGTG 958 Query: 652 YASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIR 711 Y+S + LKN D LKID F+R++ ++ D ++ +I LA KM VVAE VE+ + Sbjct: 959 YSSLSYLKNFPLDTLKIDREFVRDLSTDDEDRAVIITIITLAHSLKMEVVAEGVEDADQV 1018 Query: 712 EAVLSLGIDYMQGYLIGKPQPLIDTLNEIEP 742 + G D QGY +P P + + Sbjct: 1019 AFLRQRGCDVFQGYHFSRPLPAKEFEQFLRS 1049 >UniRef50_B8GSV3 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain n=2 Tax=Thioalkalivibrio RepID=B8GSV3_THISH Length = 806 Score = 532 bits (1372), Expect = e-149, Method: Composition-based stats. Identities = 114/453 (25%), Positives = 220/453 (48%), Gaps = 18/453 (3%) Query: 296 TITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL------- 348 I V + + V T+ R + R++ A D + L N R L Sbjct: 337 PIRDRDGHVIGAALVFRDV--TQAREMARKLSWAATHDSLTGLVNRAEFERRLDLLVTTA 394 Query: 349 -RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLAL 407 ++ A+ ++ + +++ G + ++L+ L L + + +L G++ + Sbjct: 395 RQEGRGHAVLFMDLDQFKLVNDTCGHAAGDELLRQLTRRLQGQLRDNDTLARLGGDEFGV 454 Query: 408 RLNTESHQ---ERITALDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNT 464 L + + L + + +FRF W + + + + + L+ + + Sbjct: 455 LLEGCPMERAGQIAETLRATVAEFRFQWQEKIYTVGVCIGVAPIDEHIKSVASLMSDADA 514 Query: 465 VAELSIVTNAPE-NMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDV 523 L+ ++ + G L R + +++ + R+ +ALE + F L Q I + G+ Sbjct: 515 ACYLAKEQGRNRIHIIQHGDQALSRR-QGEMSWVQRINEALERDRFCLYHQHIVPVSGNE 573 Query: 524 --YHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRF 581 + E+L+RM E+ +I+P +F+P A +GL +ID WVI L + P + Sbjct: 574 PPHTEVLVRMLDEDGAIIAPMAFIPAAERYGLMPAIDRWVIARVLNHL-RIPGPRPHGLY 632 Query: 582 AINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGC 641 AINLS S+C + + +LA+ +E ++ FE+TE+ A+ N+ QA+ + L+ LGC Sbjct: 633 AINLSGQSLCDNQMLDFILDMLARTGVEPGRVCFEITETTAIANLTQAERFMSALRNLGC 692 Query: 642 QIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVV 701 + A+DDFGTG +S+ LK + D LKIDGSF+R++ + ++ +V SI H+ + + + Sbjct: 693 RFALDDFGTGMSSFGYLKQLKVDFLKIDGSFVRDMNEDPINRAMVESINHIGHIMGIQTI 752 Query: 702 AEYVENEEIREAVLSLGIDYMQGYLIGKPQPLI 734 AE V +E + + + ++G++Y QG+ + P PL Sbjct: 753 AECVAHEAVMDHLKAIGVNYGQGFGLHMPAPLE 785 >UniRef50_B9ZNS8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZNS8_9GAMM Length = 944 Score = 532 bits (1372), Expect = e-149, Method: Composition-based stats. Identities = 118/475 (24%), Positives = 201/475 (42%), Gaps = 34/475 (7%) Query: 299 SSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL--------RD 350 + + M + + ++ I+RLA+ D + LPN L+ L R Sbjct: 473 DEDGHIMATFGTMMDI--SDRKEAEEEIRRLAFFDGLTGLPNRTLLHDRLGQALANTART 530 Query: 351 APWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLN 410 A+ ++ + + + G + +++ + + + + +L G++ + LN Sbjct: 531 RHHGAVLFIDLDNFKDINDTLGHAVGDDLLCQVARRMENSVREADTLARLGGDEFVIILN 590 Query: 411 TE-----SHQERITALDSHL-----KQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLG 460 A+ L + F+ + P IG + RS L + Sbjct: 591 DLHPDPARAATEAEAVGRKLINLLREPFQLAGQNRHVTPSIGATLFSGRS------LGVE 644 Query: 461 ELNTVAELSIV--TNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITG 518 E+ A+L++ NA N R L R ++ + + N L+ AL+ + F ++ QP Sbjct: 645 EVLKQADLAMYRAKNAGRNTVRFYDPELHRAVEARFELENELRHALDEDRFSVVYQPQVD 704 Query: 519 MRGDV-YHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENR--AK 575 G V E+LLR + ISP F+PVA + GL I V+ + + A Sbjct: 705 AEGRVIGAELLLRWEHAQRGAISPAEFIPVAEQTGLIVPIGRKVLRTACAQLGAWQHTAA 764 Query: 576 MPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQH 635 ++N+S F + ++L + +L E+TES L + + Sbjct: 765 FRDLTLSVNISARQFRDPHFVPHLREILQETGAPGDRLKLELTESMLLEEIDTVVAHIDE 824 Query: 636 LQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARM 695 L+ LG + A+DDFGTGY+S A LK + LKID SF+R+++ + D I + +LAR Sbjct: 825 LRALGVEFALDDFGTGYSSLAYLKQLPLAQLKIDQSFVRDVLDDPNDAAIAQMVVNLART 884 Query: 696 KKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEI---EPIRESA 747 + V+AE VE E R + LG + QG+L G P L D + P ESA Sbjct: 885 LDLDVIAEGVETVEQRAFLFGLGCRHFQGFLYGYPGDLADLERAVLGASPSFESA 939 >UniRef50_C6P5X9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P5X9_9PROT Length = 927 Score = 532 bits (1372), Expect = e-149, Method: Composition-based stats. Identities = 109/508 (21%), Positives = 200/508 (39%), Gaps = 28/508 (5%) Query: 254 MMWGAMRYGYKLISLLWAVVLMISIHSYQ-----NYIPIYPGYTTQLTITSSSYLVFSFI 308 ++ + R+ +W + + Y T I ++ + Sbjct: 423 RIFKSGRHDRAFYHSMWLALDTEGYWHGEVWDKRKNGEEYIKLLTINVIRDDDGAIYRHV 482 Query: 309 VNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRD--------APWSALCYLR 360 + + T ++ V I R A D + LPN + + L AL + Sbjct: 483 ALFTDI--TERKKVEELIWRQANYDSLTKLPNRQMFHDRLEQEAKKAHRAGLSMALLLID 540 Query: 361 IPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITA 420 + + + G + + +S + + V +L G++ + L+ I Sbjct: 541 LDRFKEVNDTLGHDKGDILLIEAARRISACVRESDTVARLGGDEFIVILSELEDMASIDR 600 Query: 421 LDSHL-----KQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAP 475 + + + F+ + + IG+S + + +L + + + A Sbjct: 601 VAQDILGSLAEPFKLDAEPAYISASIGISLYPNDA--TELDVLFKHADQA--MYVAKYAG 656 Query: 476 ENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDVYH--EILLRMKG 533 N +Q + ++ + N L+ A+ F + QPI M + E L+R + Sbjct: 657 RNRFNYFTKDMQEAAQARMHLANDLRIAVAAGQFRVYYQPIVEMSSGQIYKAEALIRWQH 716 Query: 534 ENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMP-AHRFAINLSPTSVCQ 592 ++SP F+P+A E GL I WV +Q + + R K + + ++N SP Sbjct: 717 PVRGMVSPAEFIPLAEETGLIVPIGEWVFRQAVQQVVQWRRKFHRSFQISVNKSPVQFRH 776 Query: 593 ARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGY 652 A + L + + +I E+TE L + L ++ G Q+AIDDFGTGY Sbjct: 777 AESLSW-PEYLEQQHVSGDSIIVEITEGLLLDAEVEVNKKLLRFRDAGIQVAIDDFGTGY 835 Query: 653 ASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIRE 712 +S + LK + D LKID SF+RN+ + D + +I +A V+AE VE E Sbjct: 836 SSLSYLKEFDIDYLKIDQSFVRNLGPGTSDLALCEAIIVMAHKLGFKVIAEGVETSTQHE 895 Query: 713 AVLSLGIDYMQGYLIGKPQPLIDTLNEI 740 + + G DY QGYL +P P + ++ Sbjct: 896 LLAAAGCDYGQGYLYSRPLPPEEFERQL 923 >UniRef50_Q2SF23 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SF23_HAHCH Length = 637 Score = 532 bits (1372), Expect = e-149, Method: Composition-based stats. Identities = 118/493 (23%), Positives = 210/493 (42%), Gaps = 33/493 (6%) Query: 270 WAVVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRL 329 W ++ S + + T T+ S V +++++ V + + R++Q++ Sbjct: 152 WEGEVL----SRRRDGYDFWWAVTVSTVCDSDNTVTNYVIS--GVDVSELKEANRKMQQM 205 Query: 330 AYVDPVVHLPNVRALNRAL--------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQ 381 A D + L N R L RD AL +L + + + G Q Sbjct: 206 ALYDSLTGLANRRLFVDRLEQAVKAASRDRKQIALLFLDLDQFKRINDTLGHDAGDSLLQ 265 Query: 382 KLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHL-----KQFRFFWDGMP 436 ++ L + + V +L G++ + L +T + + + + + + Sbjct: 266 TVAQRLKNCVRAKDTVARLGGDEFTVLLTDIVDTFSVTPVATQILKALKEPIKLKKHEVI 325 Query: 437 MQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNA--PENMQRRGAMYLQRELKDKV 494 + IGV+ + L A+L++ + L ++ Sbjct: 326 VSTSIGVTLAPTDGANADV------LMKNADLALYRAKEHGRDRYHFYTEELNAHALKQL 379 Query: 495 AMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFG 552 M L+ AL+ F L QP + V E L+R + L+ PDSF+ VA E G Sbjct: 380 LMEQELRHALQFEEFTLGFQPQVNLTTGKIVSVEALIRWHHPSKGLVMPDSFISVAEETG 439 Query: 553 LSSSIDMWVIEHTLQFMAENRA-KMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAW 611 L + I WV+++ M + A + A+NLS + + + L + +E Sbjct: 440 LINPIGRWVLKNACMQMKMLQDLTGSAIKIAVNLSARQFDDPKLEQSIEEALNETGLEPE 499 Query: 612 QLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGS 671 L EVTES + +++ L+ L++ G +AIDDFG+GY+S + LK + + LK+D Sbjct: 500 WLELEVTESMLMGDIQAVTNKLKRLRQTGVSLAIDDFGSGYSSLSYLKKLPVNALKVDRE 559 Query: 672 FIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQ 731 F+R+I +S D +I ++I +A ++ VVAE VE E +E +L+ D+ QGY KP Sbjct: 560 FVRDIPEDSNDMEITSAIIAVAHKLQLKVVAEGVETAEQKEYLLANQCDFAQGYFFSKPL 619 Query: 732 PLID---TLNEIE 741 D LNE + Sbjct: 620 SFEDLYIYLNEHK 632 >UniRef50_B3PCE8 Sensory box/GGDEF family protein n=2 Tax=Gammaproteobacteria RepID=B3PCE8_CELJU Length = 772 Score = 532 bits (1371), Expect = e-149, Method: Composition-based stats. Identities = 115/473 (24%), Positives = 189/473 (39%), Gaps = 23/473 (4%) Query: 278 IHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQ-----RAVVRRIQRLAYV 332 + + Y L VF + + R R+ +A+ Sbjct: 273 LMHKDGSLHTYLMVKFPL--RGKEGKVFGVCTIGTDISERKLAENALREQQSRLNYMAFH 330 Query: 333 DPVVHLPNV--------RALNRALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLS 384 D + LPN L RA R AL L I +++ + G + ++ Sbjct: 331 DALTSLPNRSLFYDRIYHGLARARRSNSRVALMLLDIDRFKIVNDSLGHDAGDILLKAIA 390 Query: 385 HWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLK---QFRFFWDGMPMQPQI 441 L+ + + V +L G++ + L + + + + L G + + Sbjct: 391 MRLTEGVRDMDTVARLGGDEFVVVLEGIHDVDDVIFVANKLLATLSRPLDISGHSISATV 450 Query: 442 GVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQ 501 + LL + + A +N + + + + + N L+ Sbjct: 451 SIGVSIFPEDGADTDELLKNADIA--MYKAKEAGKNNCQFYTKGMNATAVNYLLLENDLR 508 Query: 502 QALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDM 559 +A+E N L QP ++ E L+R + L+SP F+P+A E GL I Sbjct: 509 RAIEQNQLALYYQPQIDLKTGDMTGVEALVRWQHPERGLVSPAHFIPLAEETGLIVPIGE 568 Query: 560 WVIEHTLQFMAENRAKMPAH-RFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVT 618 WV+ + + A+NLSP Q FP +V +L + +EA L E+T Sbjct: 569 WVLREACKQKKIWLDTGKNVGKVAVNLSPRQFRQKNFPGKVEAILQETGLEAKYLELEIT 628 Query: 619 ESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVS 678 ES A+ + + L L ++G +AIDDFGTGY+S A L+ LKID SFI +I Sbjct: 629 ESCAMEHAGETINQLNQLNQMGTFLAIDDFGTGYSSLAYLQRFPIQKLKIDRSFIHDIHD 688 Query: 679 NSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQ 731 ++ D I +I LA ++ VVAE VE E E + + G D +QG+L KP Sbjct: 689 DANDAAIAKTIIGLAHNMQLRVVAEGVETESQAEWLRAKGCDQVQGFLYAKPM 741 >UniRef50_A4TX60 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TX60_9PROT Length = 961 Score = 532 bits (1371), Expect = e-149, Method: Composition-based stats. Identities = 107/451 (23%), Positives = 199/451 (44%), Gaps = 15/451 (3%) Query: 294 QLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNV--------RALN 345 ++++ + + + + T ++ R++ +A+ DP+ LPN RA+ Sbjct: 498 EVSMRLARFSDGQNRLLVVVRDITERKNAQDRLEFMAHHDPLTELPNRLLLQDRVDRAIA 557 Query: 346 RALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDL 405 A R+ AL +L + + + + G + + ++ L + + + +L G++ Sbjct: 558 LAEREGRRVALMFLDLDQFKTVNDSLGHAAGDRLLKDVAWRLRQCVRESDTIARLGGDEF 617 Query: 406 ALRLNTESHQERITALDSHLKQ---FRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGEL 462 + LN + + + + + +G + + + + L+ + Sbjct: 618 VIVLNAVRDADGVVEVAEKIHKSVAPPITIEGQEVTSTLSMGIAMFPEDGHDFDTLMKKA 677 Query: 463 NTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD 522 + A + + + R A + + +A+ + L +ALE F L QP + G Sbjct: 678 D--AAMYHAKESGRSTYRFFAARMNADAVAHLALRSGLHRALERGEFQLYFQPQVSLTGG 735 Query: 523 --VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHR 580 V E L+R L+SP F+PVA + GL + WV+ + A +A A Sbjct: 736 AVVGAEALIRWNHPERGLVSPAEFIPVAEDSGLIVPMGDWVLRQACRQAALWQAGGHALT 795 Query: 581 FAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELG 640 A+NLS + V + L + + L E+TES + + + + L LG Sbjct: 796 MAVNLSALQFRRGDLERAVREALEESGLAPHSLELELTESIMIQDHEAVMDMTRRLGALG 855 Query: 641 CQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLV 700 Q++IDDFGTGY+S A LK D LKID SF+R++ +++ + I +I +A K+ V Sbjct: 856 VQLSIDDFGTGYSSMAYLKRFAVDKLKIDQSFVRDVHTDTDNAAITQAIIQMAHSLKLEV 915 Query: 701 VAEYVENEEIREAVLSLGIDYMQGYLIGKPQ 731 +AE VE E+ E + G D QG+L G+P Sbjct: 916 IAEGVEVTEVVEFLRDHGCDLAQGFLYGRPM 946 >UniRef50_C0INC4 GGDEF family protein n=1 Tax=uncultured bacterium BLR9 RepID=C0INC4_9BACT Length = 765 Score = 532 bits (1370), Expect = e-149, Method: Composition-based stats. Identities = 104/482 (21%), Positives = 197/482 (40%), Gaps = 28/482 (5%) Query: 276 ISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPV 335 I + + +PI ++ I + + V T RA+ ++ LA D + Sbjct: 285 ILVRRDGSELPID---ESRAPILDRQGQIAGTVTVLHDVSVT--RAMELKMAHLAQHDFL 339 Query: 336 VHLPNVRALNRALRD--------APWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWL 387 LPN R L+ LR A+ ++ I + + + G + + Q ++ L Sbjct: 340 TDLPNRRVLDDRLRQAISLARRQGKQLAVLFVDIDRFKHINDSLGHGMGDKALQSMAERL 399 Query: 388 SPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLK-----QFRFFWDGMPMQPQIG 442 + + + V + G++ + L + + + + R + + IG Sbjct: 400 TTCVRASDTVARQGGDEFVILLAEVTTADDAAIVAKKILSAVALPHRIGRHELQISASIG 459 Query: 443 VSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQ 502 +S C + + L+ + + N + + + + ++ + L+ Sbjct: 460 ISTCPNDA--DDAETLIKHADIA--MYQAKEKGRNNYQFFRADMNERVLQRQSLESSLRL 515 Query: 503 ALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMW 560 ALE F L QP + E L+R + L+ P SF+ VA + GL I W Sbjct: 516 ALERQEFLLHYQPKMNLETGHITGMEALIRWRHPELGLVPPASFIGVAEDCGLMQPIGRW 575 Query: 561 VIEHTLQFMAENR-AKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTE 619 V++ + + E A + A+N+S + F V L + ++ L E+TE Sbjct: 576 VLQEACRQVKEWMVAGLNPVPVAVNVSAVEFRRKHFFDGVISTLRETDLDPRYLELELTE 635 Query: 620 SNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSN 679 + + + L L+ G ++AIDDFGTGY+S + L + D LKID SF+ ++ + Sbjct: 636 TVLMKEAEPTIAVLHALKSAGVKLAIDDFGTGYSSLSYLTRLPVDTLKIDRSFVTDVTTR 695 Query: 680 SLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQP---LIDT 736 + + IV++I + + + V+AE VE +E + S QGY +P + + Sbjct: 696 TDNAAIVSAIIGMGKSLNLNVIAEGVETQEQLALLRSHCCAEGQGYYFSRPVSVPAVAEL 755 Query: 737 LN 738 LN Sbjct: 756 LN 757 >UniRef50_D1T3A4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Acidovorax avenae subsp. avenae ATCC 19860 RepID=D1T3A4_9BURK Length = 1083 Score = 532 bits (1370), Expect = e-149, Method: Composition-based stats. Identities = 121/481 (25%), Positives = 207/481 (43%), Gaps = 25/481 (5%) Query: 281 YQNYIPIYPGYTTQLTIT--SSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHL 338 + YP + + V + I +A+ T ++ RI+ LA+ D + L Sbjct: 588 RRRSGESYPAWLMVSAVREGGKGGAVTNHIG--IAIDITDRKRNEERIRFLAHHDVLTEL 645 Query: 339 PNVRA--------LNRALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPL 390 PN L +A R A+ ++ + + + G + + ++ L Sbjct: 646 PNRSLCVQRLQAGLEQAARTGEQLAVLFIDLDRFKAINDTLGHHIGDGLLRSVAARLVQS 705 Query: 391 LEPGEDVYQLSGNDLALRLNT-ESHQERITALDSHLKQF---RFFWDGMPMQPQIGVSYC 446 + G+ V +L G++ + + E Q+ + ++ L + + V Sbjct: 706 VREGDTVSRLGGDEFVIVMRQVEGAQQVLRVVEERLIPLIRQSHPVEAHELSVSCSVGIA 765 Query: 447 YVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEH 506 + L+ + A + A +M R ++ R ++ + AM L++ALE Sbjct: 766 VYPEDGADLDELMRRAD--AAMYEAKTAGRDMARLYSLETDRRVQARQAMEQSLRRALER 823 Query: 507 NHFFLMAQPITGMRGDV--YHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEH 564 F L QP R + E LLR + + + P F+P+A E GL +I WV++ Sbjct: 824 REFALHYQPRMSARTGMPTGLEALLRWRHPSLGEVLPGEFIPIAEEAGLIRAIGAWVLDQ 883 Query: 565 TLQFMAENRA-----KMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTE 619 A RA + ++NLS + +++ LLA++ + A L E+TE Sbjct: 884 ACAQWAAWRASEAGGGLAGLPVSVNLSAAQLADPLLVPDIAALLARHGMPARCLELEITE 943 Query: 620 SNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSN 679 S + N AQ L L++LG Q++IDDFGTGY+S A LK D LK+D SFIR+++++ Sbjct: 944 SQLMDNAGVAQGQLAALKQLGVQLSIDDFGTGYSSLAYLKRFAIDKLKVDKSFIRDMLAS 1003 Query: 680 SLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNE 739 D I +I L R + VVAE VE+ + SL D +QGYL + P Sbjct: 1004 PADMAITRAIIGLGRTLGLQVVAEGVEDAATLRMLESLDCDEVQGYLFSRALPPEALQRW 1063 Query: 740 I 740 + Sbjct: 1064 V 1064 >UniRef50_A5GBG4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=A5GBG4_GEOUR Length = 709 Score = 532 bits (1370), Expect = e-149, Method: Composition-based stats. Identities = 118/499 (23%), Positives = 204/499 (40%), Gaps = 19/499 (3%) Query: 261 YGYKLISLLWAVVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQR 320 Y + H+ + +Y + IT+ + + FI + T ++ Sbjct: 203 YRKLWEIISGGGEWWGEFHNRKKNGELYWASASISPITNGNEQITHFIAFQEDI--TERK 260 Query: 321 AVVRRIQRLAYVDPVVHLPNVR--------ALNRALRDAPWSALCYLRIPGMEMLVKNYG 372 I+++AY D + LPN AL +A R A+ +L + + + G Sbjct: 261 QAEETIKQMAYYDTLTGLPNRHLFNELMHLALAQAHRHNRLLAVLFLDLDRFKHINDTLG 320 Query: 373 IMLRIQYKQKLSHWLSPLLE-PGEDVYQLSGNDLALRLNTESH-QERITALDSHLKQFR- 429 + Q Q +H L + V + G++ + L QE + + F Sbjct: 321 HTVGDQLLQASAHRLKECCRRDRDTVARRGGDEFIILLPDIDDVQEAVRVAQKIIDAFTQ 380 Query: 430 -FFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQR 488 F + + + + L+ + + + + Sbjct: 381 VFVLPDIELFISTCIGISIFPNDGRDTETLIKNADMA--MYRAKEQGRSRYHLYTSSMDE 438 Query: 489 ELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLP 546 + ++ M N L++AL+ F L QP ++ V E L+R + LI P+ F+P Sbjct: 439 QAFRRLTMENSLRKALQREEFSLYYQPKVNIKTGQIVCLEALVRWQNPEMGLILPNQFIP 498 Query: 547 VAHEFGLSSSIDMWVIEHTLQFMAENRA-KMPAHRFAINLSPTSVCQARFPVEVSQLLAK 605 +A + GL + WV+ + P R A+N SP Q R V Q+L + Sbjct: 499 LAEDTGLIIPLGEWVLRTACAQNKTWQLLNYPPMRVAVNFSPRQFQQPRLTDMVEQILGE 558 Query: 606 YQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADL 665 + L E+TE+ L NV++ TL L LG I+IDDFGTGY+S + +K + Sbjct: 559 ADLAPCWLELELTENVMLQNVEKTVQTLNRLSNLGIHISIDDFGTGYSSLSYIKKLPIQT 618 Query: 666 LKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGY 725 LKID SF+ +I +N+ D I ++ +A+ ++ V+AE VE E + + L MQGY Sbjct: 619 LKIDRSFVHDINTNADDAAIAIAVITMAQSLRLNVIAEGVETLEQMKLLDGLNCPEMQGY 678 Query: 726 LIGKPQPLIDTLNEIEPIR 744 L KP P+ + + I+ Sbjct: 679 LFSKPLPVAEMTTLLSNIK 697 >UniRef50_B9M1S6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=B9M1S6_GEOSF Length = 749 Score = 531 bits (1369), Expect = e-149, Method: Composition-based stats. Identities = 116/446 (26%), Positives = 192/446 (43%), Gaps = 21/446 (4%) Query: 302 YLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL--------RDAPW 353 + + M + T+++ +I+RLAY D + LPN L L RD Sbjct: 274 FPETGYFAFLMEDV-TQRKVNEEQIRRLAYYDNLTGLPNRALLMDRLEQMLTKARRDKTR 332 Query: 354 SALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTES 413 L +L + +++ G Q ++++ L L + + ++ G++ + E Sbjct: 333 VVLLFLDLDRFKVINDTMGHAHGDQLLVQVANRLRQALRSSDTLARIGGDEFVVLFTLEG 392 Query: 414 HQERITALDSHLKQF---RFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSI 470 Q ++ L HL + G + + LL A++++ Sbjct: 393 PQLNVSPLAQHLIDSITSVYPISGRDVYASTSIGIATFPDDGGDCNSLL----RCADMAM 448 Query: 471 VTNA--PENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHE 526 + + + ++ M L+ ALE FFL QPI R V E Sbjct: 449 YAAKEGGGKGYHFYSPEMNLKAHARMEMETNLRHALEREEFFLEFQPIVNARDGRLVGAE 508 Query: 527 ILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENR-AKMPAHRFAINL 585 LLR LI PD F+ VA E G + WV+ + M + R A +P R ++N+ Sbjct: 509 ALLRWSDPEKGLIMPDMFIQVAEESGFIVPLGEWVLRTACRKMKDWREAGLPPFRISVNV 568 Query: 586 SPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAI 645 S CQA F V ++ + ++ L E+TE++ + +V+ L L+EL I I Sbjct: 569 SGRQFCQANFTDTVCSIIRETGMDPSFLALEMTETSLMVDVEATAKALMQLKELDISIVI 628 Query: 646 DDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYV 705 DDFG GY+S L+ D +KID SFIR++ S++ D IV +I +A K+ VVAE V Sbjct: 629 DDFGAGYSSLGYLQKFPIDRIKIDRSFIRDLSSHANDKAIVEAIIAMAARLKLQVVAEGV 688 Query: 706 ENEEIREAVLSLGIDYMQGYLIGKPQ 731 E E + + G +QG+ +P Sbjct: 689 ETSEQLDFLKEQGCHEIQGFYFHRPL 714 >UniRef50_Q21XK7 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q21XK7_RHOFD Length = 716 Score = 531 bits (1369), Expect = e-149, Method: Composition-based stats. Identities = 113/512 (22%), Positives = 211/512 (41%), Gaps = 37/512 (7%) Query: 255 MWGAMRYGYKLISLLWAVVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAV 314 MW A+R G W + ++P T + + + ++ N++ V Sbjct: 201 MWAAIRTGGFWQGEFW---------DRRKDGSVFPKMMTVSVVLDRAGDIDFYLANFVDV 251 Query: 315 LATRQRAVVRRIQRLAYVDPVVHLPNV--------RALNRALRDAPWSALCYLRIPGMEM 366 + + RRI+ LA+ D + LPN +++ A R + A+ +L + + Sbjct: 252 --SHYKETERRIEHLAHHDTLTGLPNRLHLQVFLEQSILIAKRMSEQLAVVFLDLDRFKT 309 Query: 367 LVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLK 426 + G + +++ L + + V +L G++ + L +A+ ++ Sbjct: 310 INDTLGHPVGDDLLIQVADRLKTSVRQYDMVARLGGDEFVMILRGHDMPSVASAVAEKIR 369 Query: 427 -----QFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRR 481 F+ + IG++ + +L A+ ++ E Sbjct: 370 LHLNQPFQIGQHTLRTATSIGIALYPGNGE------RMDDLMKHADTAMYFTKSEGGNGF 423 Query: 482 --GAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGM--RGDVYHEILLRMKGENDE 537 + + +K+ + N L ALE+ F L QP + + + E+LLR Sbjct: 424 CFFSSDMNLHAHEKLELENLLHGALENQQFELYYQPQLSLPEQQVIGAEVLLRWHHPEKG 483 Query: 538 LISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAEN-RAKMPAHRFAINLSPTSVCQARFP 596 ISP F+P+A +I WV+E+ + ++ R +P R +N+S Sbjct: 484 FISPAVFIPLAEATNQIGAIGEWVLENACRQASQWLRDGLPLPRIGVNVSGRQFQDKNLF 543 Query: 597 VEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYA 656 V ++LA+ + A +L E+TE+ + +A LQ L+E G +A+DDFG GY+S Sbjct: 544 TLVKRVLAETGLPADRLELEITETAVTASPDEAARLLQSLRECGIMVALDDFGQGYSSLG 603 Query: 657 RLKNVNADLLKIDGSFIRNIVSNSLD--YQIVASICHLARMKKMLVVAEYVENEEIREAV 714 +L+++ D LKID +F+R+I I A+ L V+AE VE + + Sbjct: 604 QLRDLPIDRLKIDAAFVRDITDEPGHPGGAIAAATIGLGHNLGFSVIAEGVETQAQLSFL 663 Query: 715 LSLGIDYMQGYLIGKPQPLIDTLNEIEPIRES 746 ++ G D +QGY KP P + E+ Sbjct: 664 MAHGCDEVQGYYFAKPMPREQFEAFLRARMEA 695 >UniRef50_C1DD31 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DD31_LARHH Length = 910 Score = 530 bits (1367), Expect = e-149, Method: Composition-based stats. Identities = 125/491 (25%), Positives = 204/491 (41%), Gaps = 24/491 (4%) Query: 270 WAVVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRL 329 WA L++ Q ++ + T T+ + + + + ++A RRIQ L Sbjct: 419 WAGELLL----RQRNGQLFLAWLTLRTVR--LGTSTYHVCMFGDL--SDRQAAERRIQYL 470 Query: 330 AYVDPVVHLPNVRALNRALRDAPWSA---------LCYLRIPGMEMLVKNYGIMLRIQYK 380 AY D + LPN L A L L I + + G Q Sbjct: 471 AYFDTLTGLPNRALLTDRANMALRGVEGDAAPALALLLLDIDHFKHINDTLGHSTGDQLL 530 Query: 381 QKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLKQFRFFWDGMPMQPQ 440 Q ++ L + G+ V + G++ + L + + L++ F Sbjct: 531 QSVAKRLQATVREGDTVSRQGGDEFVVLLPDANASRAASVAQEILRRLGFVCRIGEHDIS 590 Query: 441 IGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNA--PENMQRRGAMYLQRELKDKVAMMN 498 + VS +P + L+ AE+++ N R +Q V + Sbjct: 591 VSVSIGIAMAPDDGTD--FATLSKCAEIAMYRAKQEGRNTLRFFFPEMQERTLRHVQLTG 648 Query: 499 RLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSS 556 L+ A+E L QP ++ E LLR +SP F+P+A E GL Sbjct: 649 ALRGAVERGEMQLHYQPQVDLQTGELSGVEALLRWTHPLFGAVSPGEFIPLAEESGLIIP 708 Query: 557 IDMWVIEHTLQFMAEN-RAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIF 615 I WV+ + +A+ R +P A+NLS +++ +L++ + Sbjct: 709 IGDWVLRTAARQLADWLRDGLPPMVMAVNLSVLQFNLPGLAQQIASILSEAGVPPALFEV 768 Query: 616 EVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRN 675 E+TES A+T + A T+ L +G Q+++DDFGTGY+S A LK D LKIDGSF+R+ Sbjct: 769 ELTESMAMTEPEAAIATIDELHSVGVQVSLDDFGTGYSSLAYLKRFRLDRLKIDGSFVRD 828 Query: 676 IVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLID 735 S+ D IV +I +A + VAE VE E + +LG D +QGY I +P P Sbjct: 829 ADSDPEDRAIVDAIVGMAESLGLATVAEGVETSGQLEVIRALGGDAVQGYWISRPLPAAG 888 Query: 736 TLNEIEPIRES 746 + +E ++ Sbjct: 889 LVAWLEGWQQR 899 >UniRef50_Q60BD0 Sensory box protein n=1 Tax=Methylococcus capsulatus RepID=Q60BD0_METCA Length = 1214 Score = 530 bits (1367), Expect = e-149, Method: Composition-based stats. Identities = 113/517 (21%), Positives = 216/517 (41%), Gaps = 27/517 (5%) Query: 254 MMWGAMRYGYKLISLLW-----AVVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFI 308 ++ + +G + +W I + + +YP T + S++ + ++ Sbjct: 702 RLFKSGLHGAEFYREVWRSLEQTGRWQGEIWNRRKNGEVYPERKTITAVRSANGDITHYV 761 Query: 309 VNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL--------RDAPWSALCYLR 360 + + + +I++LAY D + LPN + L R+ + AL ++ Sbjct: 762 AISSDI--SELKRTEEKIRQLAYYDSLTGLPNRSLIFERLTQQMKAARREGTYGALLFMD 819 Query: 361 IPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITA 420 + + L + G + + +++ L LE E +L G++ + L + A Sbjct: 820 LDYFKTLNDSLGHHMGDRLLVQVAERLKNCLEDEEAAARLGGDEFVVLLAPAKPSASVAA 879 Query: 421 LDSHLKQFR--------FFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVT 472 + + R F D + + N +L + +T + + Sbjct: 880 GQAIVHARRVRELLSAPFQLDDYVHYISVSIGIALFPDGANTAEDVLKQADTA--MYVAK 937 Query: 473 NAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDV-YHEILLRM 531 N + R ++ ++ ++ + L++AL ++ F + QP G V E L+R Sbjct: 938 NEGRDGVRFYESAMEAVVRGRLELEKALRKALANDEFEVYYQPQMLGDGRVVGAEALIRW 997 Query: 532 KGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAH-RFAINLSPTSV 590 ISPD F+PV + G+ + V+ +AE RA+ A + ++N+SP Sbjct: 998 FHPERGAISPDQFIPVCEQNGMILRVGAIVLRRACACLAEIRARGLALPKLSVNVSPRQF 1057 Query: 591 CQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGT 650 ++ ++ Q + + L E+TE L + + A + L+ LG +IDDFGT Sbjct: 1058 MRSDLMTQLEQFCLENGVSPTDLCLELTEGVLLNHTELAVAQIGRLKNLGVSFSIDDFGT 1117 Query: 651 GYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEI 710 GY+S A LK++ D LKI +F+R++ +S D IV +I +AR + V+AE VE Sbjct: 1118 GYSSLAYLKHLPLDDLKIASAFVRDLEQDSSDAAIVETIVSMARHLGLDVIAEGVETRTQ 1177 Query: 711 REAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIRESA 747 E + G QG +P P D + + + A Sbjct: 1178 VEILERYGCHRFQGNYFARPLPKDDFIRFVAERQRRA 1214 >UniRef50_Q3A628 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A628_PELCD Length = 1063 Score = 530 bits (1367), Expect = e-149, Method: Composition-based stats. Identities = 109/474 (22%), Positives = 191/474 (40%), Gaps = 19/474 (4%) Query: 282 QNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNV 341 Q + + + S + + + + T +R +I++LAY D + LPN Sbjct: 582 QKNGNGFDVELQAQVVKDQNGGPLSILASAIDI--TDKRKTELQIKKLAYFDSLTGLPNR 639 Query: 342 R--------ALNRALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEP 393 AL +A R + A+ L + + + G + ++ L Sbjct: 640 TLLKDHMELALGQARRLNKFVAVLLLDLDNFKHINDTLGHATGDLLIRSVAERLRTECRT 699 Query: 394 GEDVYQLSGNDLALRLNTESHQERITALDSH----LKQFRFFWDGMPMQPQIGVSYCYVR 449 + + + G++ L L + T+ L + F + + Sbjct: 700 CDTLARWGGDEFVLLLTDLDDIQNTTSATEKFMALLTERPFATSECDINTTASIGIALYP 759 Query: 450 SPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHF 509 LL +T + N ++ L + + + M L+ AL+ Sbjct: 760 QDGQDPETLLKRADTA--MYEAKKNGRNGYHFFSLQLAEQAERRHRMEINLRSALKEGEM 817 Query: 510 FLMAQPITGMRG--DVYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQ 567 L+ QP + E LLR + + ISP F+P+A E GL + WV++ + Sbjct: 818 QLVYQPQIDLGKVRITGMEALLRWQSPEEGTISPARFIPLAEETGLIYPLGEWVLQQACR 877 Query: 568 FMA-ENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNV 626 A + + A+NLS Q + ++L + + L E+TES L N+ Sbjct: 878 QGAIWQKTEASPLCVAVNLSAKQFHQPDLAKNIKKILRETGLSPHLLELEITESVFLENM 937 Query: 627 KQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIV 686 + A L L++LG Q +IDDFGTGY+S + LK + D +KI F+R+I ++ D I+ Sbjct: 938 EAAIEALTELKKLGVQFSIDDFGTGYSSLSYLKKLPIDRIKIAQEFVRDIDTDDGDKAII 997 Query: 687 ASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEI 740 + +A+ M ++AE VEN + +L G MQGY KP P + + I Sbjct: 998 KATIAMAKSLGMKLIAEGVENHQQLAFLLLHGCHAMQGYYFAKPMPAQEVPSFI 1051 >UniRef50_Q1PY13 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PY13_9BACT Length = 857 Score = 530 bits (1367), Expect = e-149, Method: Composition-based stats. Identities = 109/467 (23%), Positives = 193/467 (41%), Gaps = 18/467 (3%) Query: 277 SIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVV 336 + S + + ++ + I S+ + ++ + T + RI LAY D + Sbjct: 376 AFSSRKKHGELFWTSLSLSAIKSNEGFISHYLAIMEDI--TEHKQAEERIHYLAYYDSLT 433 Query: 337 HLPNVRALNRAL--------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLS 388 LPN + L R A+ ++ I + + G + + ++ L Sbjct: 434 ALPNRELFHDRLNMAIIHAHRKQQMLAVAFIDIDRFKKVNDTLGHSTGDRLLKIIADRLK 493 Query: 389 PLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLKQ---FRFFWDGMPMQPQIGVSY 445 + + V + G++ L L S E + + + D + + Sbjct: 494 SCIREEDTVSRQGGDEFVLLLTEISRMEDANDVTQRILKKLKEPVIIDDHDLCISASIGI 553 Query: 446 CYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALE 505 LL ++ + I + + + +Q + +++ L++ALE Sbjct: 554 ALYPGDGTTAEALLKNADSA--MYISKESGRDNYHFYSSTVQEKAYEQLLEEMYLRRALE 611 Query: 506 HNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIE 563 + L QP + V E LLR K LISP F+P+A + G ID WV+ Sbjct: 612 NRELVLYYQPQVNIATGRLVGMEALLRWKHPKKGLISPAEFIPLAEDTGQIVPIDFWVLH 671 Query: 564 HTLQF-MAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNA 622 + MA RA +P+ A+N+S + + V+ +L ++ L E+TE A Sbjct: 672 TACKQNMAWQRAGLPSVPIAVNISGHTFGRENLIDFVNNVLHDTRMSPDALDLEITEGIA 731 Query: 623 LTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLD 682 + N++ L L+ LG QI IDDFGTG++S + L LKI +FI N+ + + Sbjct: 732 IQNLQTTIYKLNKLKSLGIQITIDDFGTGFSSLSYLSKFPIQKLKIGMTFIHNLHKDPTN 791 Query: 683 YQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGK 729 IV ++ +A+ ++ V+AE VE +E E + L D QGYL K Sbjct: 792 SAIVKAVIAMAKSLQLTVIAEGVETDEQFEFLQGLQCDEFQGYLCSK 838 >UniRef50_C0N6D3 Putative uncharacterized protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N6D3_9GAMM Length = 805 Score = 530 bits (1366), Expect = e-149, Method: Composition-based stats. Identities = 124/509 (24%), Positives = 240/509 (47%), Gaps = 32/509 (6%) Query: 255 MWGAMRYGYKLISLLWAVVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAV 314 MW ++R G + I + + +Y I + + F+ + Sbjct: 301 MWASIRSGKEWNGE---------IQNRRKSGELYWIKEYVAPIRNDEGTITHFVAIQEDI 351 Query: 315 LATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL--------RDAPWSALCYLRIPGMEM 366 T R + ++ A D + L N R L + ALC++ + ++ Sbjct: 352 --TEARVLANKLSYQATHDNLTGLINRTEFERRLIELVQDARQHDSVHALCFIDLDQFKV 409 Query: 367 LVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTES---HQERITALDS 423 + G + + ++L L + + + +L G++ A+ + ++ T + Sbjct: 410 INDTCGHIAGDELLRQLGQRLIGQVRKSDTLARLGGDEFAILMRHCDPGQSEKVATEVRE 469 Query: 424 HLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGA 483 ++ F+F WD + + + +L + +T + NA N Sbjct: 470 VIELFQFVWDSRVFTIGASIGVSSIHRHTTDMTEVLKQADTACYAA--KNAGRNRVYIYQ 527 Query: 484 MYLQR--ELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELI 539 + E + + +N ++ AL N F L QPIT + +E+LLR++ + +L Sbjct: 528 DDDKHLVEQQGEFHWVNEIKLALTENRFELFVQPITSAKSGKAEIYEVLLRLRNKQGDLS 587 Query: 540 SPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHR-FAINLSPTSVCQARFPVE 598 P +FLP A + LS +D WV+E T ++ ++ ++P R AINLS S+ Sbjct: 588 PPSAFLPSAERYNLSDKVDRWVLEKTFDWLEKHINQVPDLRKIAINLSGASLGNDEMLKL 647 Query: 599 VSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARL 658 +S L K + A ++ FE+TE+ A++N+++A + L +LGC+ ++DDFG+G +S+ L Sbjct: 648 ISDLFEKARFSASKIKFEITETAAISNLREATRFISELSKLGCEFSLDDFGSGLSSFGYL 707 Query: 659 KNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLG 718 K++ +KIDG F++++ + LD+++V SI + + + +AE+VENE++ + + S+G Sbjct: 708 KHLPVKSIKIDGMFVKDMAHDPLDFEMVKSINDIGHVMGLKTIAEFVENEDVWQKLQSIG 767 Query: 719 IDYMQGYLIGKPQPLIDTLNEIEPIRESA 747 IDY QGY +G+P P+ L +P + S+ Sbjct: 768 IDYGQGYHLGRPVPIDSIL---KPTQNSS 793 >UniRef50_C6MIL1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MIL1_9PROT Length = 576 Score = 530 bits (1366), Expect = e-149, Method: Composition-based stats. Identities = 116/455 (25%), Positives = 197/455 (43%), Gaps = 18/455 (3%) Query: 296 TITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNV--------RALNRA 347 I +S I ++ + T + +RI +A D + LPN RAL Sbjct: 119 PICDTSGKPLYLIGMFVDI--TERHRAEQRILEMATYDILTGLPNRALLKDRIERALEHG 176 Query: 348 LRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLAL 407 R+ AL ++ + +++ + G + + Q ++ ++ + V + G++ + Sbjct: 177 NRNRQRVALLFIDLDNFKVINDSLGHDVGDKLLQAVAARFVSIVRGEDTVARQGGDEFIV 236 Query: 408 RLNTESHQERITALDSHLK---QFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNT 464 L+ A+ + Q F DG + + I+ LL N+ Sbjct: 237 LLSNLESAFDAEAVAQKILNALQLHFLIDGKELHISGSIGISLFPDDGEDIWTLLR--NS 294 Query: 465 VAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDV- 523 + N + R+ K++ +M L+ AL+ + L QPI + G Sbjct: 295 DIAMYHAKKNGRNNCEFFKPEMNRQAKERHSMEVALRNALKRDELLLHYQPIVNVNGGKA 354 Query: 524 -YHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTL-QFMAENRAKMPAHRF 581 E+LLR + D LI P F+ +A E G+ I W++ + Q A R Sbjct: 355 DGFEVLLRWQHPGDGLIYPVKFIRLAEETGMIIPIGEWLMRQSCLQIKAWQEQGYEVPRL 414 Query: 582 AINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGC 641 AINLS Q + ++L + + L E+TES + +V++ TL+ L ELG Sbjct: 415 AINLSAIQFRQKTLMENIVRILDETGVTGHYLTLEITESELIEDVEETIKTLRQLSELGI 474 Query: 642 QIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVV 701 +I+IDDFGTGY++ + LK + LKID SF+R+I + D I+ +I +A + V+ Sbjct: 475 EISIDDFGTGYSNLSFLKRYQINTLKIDRSFVRDIPDDPDDTAIIDAILVMAHALGLQVI 534 Query: 702 AEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDT 736 AE VENE+ + G QG+ KP P I+ Sbjct: 535 AEGVENEQQLAYLALHGCTRFQGFYFSKPLPAIEI 569 >UniRef50_Q74A79 Sensory box/GGDEF family protein n=1 Tax=Geobacter sulfurreducens RepID=Q74A79_GEOSL Length = 873 Score = 530 bits (1365), Expect = e-149, Method: Composition-based stats. Identities = 103/453 (22%), Positives = 186/453 (41%), Gaps = 18/453 (3%) Query: 302 YLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL--------RDAPW 353 + + + + T +R + A D + LPN L L R Sbjct: 411 GDDQALCLMFHDI--TDRRRFQEELLHQATHDTLTGLPNRSLLEDRLNQAVAGARRRGQM 468 Query: 354 SALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTES 413 AL + +++ G Q + ++ + + + +L G++ + L + Sbjct: 469 VALLMFDLDNFKVVNDTLGHTAGDQLLRSVAARIRSFVRNCDTFARLGGDEFVIVLTNLT 528 Query: 414 HQERITALDS---HLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSI 470 + + +L FF G + + + + L+ + +T + Sbjct: 529 RMDDAVTVAESFRNLLAMPFFLGGREIFITASMGISLFPDDGDTMEALIKKADTA--MYH 586 Query: 471 VTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEIL 528 + + N + A + +++ ++ + L++ALE L QP V E L Sbjct: 587 IKESGRNSFQFFAEEMNQKVNARLTIETGLRRALEKGEMLLHYQPRLEPGTGAVVGMEAL 646 Query: 529 LRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTL-QFMAENRAKMPAHRFAINLSP 587 +R + LISP F+P+A + GL I WV+ Q + +R + R ++N+S Sbjct: 647 VRWNSPDMGLISPADFIPIAEDSGLIVEIGDWVLATACCQALEWHRMGHDSLRVSVNISA 706 Query: 588 TSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDD 647 F V +++ + + + E+TE+ NV + + L+E G I+IDD Sbjct: 707 RQFVGHDFVDRVVRIIEQSGLSPHFVELELTETALTHNVDETVKIMNRLRERGITISIDD 766 Query: 648 FGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVEN 707 FGTGY+S LK D+LKID SFI ++V D IVA+I +A M VVAE VE Sbjct: 767 FGTGYSSLNYLKRFPVDVLKIDKSFIDDMVKRREDAAIVATIIGIAHHMHMKVVAEGVET 826 Query: 708 EEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEI 740 E + ++ + +QG+ +P P + I Sbjct: 827 AEQMKLLMEGNCEEIQGFYFSRPLPPEEFERYI 859 >UniRef50_B9Z192 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z192_9NEIS Length = 943 Score = 530 bits (1365), Expect = e-148, Method: Composition-based stats. Identities = 124/509 (24%), Positives = 222/509 (43%), Gaps = 27/509 (5%) Query: 255 MWGAMRYGYKLISLLWAVVLMIS-----IHSYQNYIPIYPGYTTQLTITSSSYLVFSFIV 309 M + R+ +W+ + + + + +YP + + ++ + ++ Sbjct: 429 MLSSGRHDETFYEAMWSAINEHGSWQGELWNRRKNGEVYPEWLAISAVRNAVGEITHYVA 488 Query: 310 NYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVR--------ALNRALRDAPWSALCYLRI 361 + + + ++A RIQ LA+ D + LPN A+ A RD AL L + Sbjct: 489 IFSDL--SERKAADERIQFLAHFDVLTGLPNRAHIQDRVELAIQNATRDNERLALLLLDL 546 Query: 362 PGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITAL 421 + + ++ G Q L+ + L GE V + G++ + L + Sbjct: 547 DRFKTINESLGHSAGDALLQVLAERIRSTLLTGEVVARQGGDEFIVLLPLIADPGSAALA 606 Query: 422 DSHLKQF-----RFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPE 476 +++ F + + P IG+S P + N A + +A Sbjct: 607 AERIREVLEPPVELFNHSISITPSIGISVF----PDDGRDFETLVRNADAAMYHAKSAGR 662 Query: 477 NMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGE 534 N + L ++ + + ++L+ AL+ + F L QP ++ + E L+R + Sbjct: 663 NSYKFYTADLNARAREILEIESQLRYALDRDEFVLHYQPQVDLKTGEIIGAEALIRWQHP 722 Query: 535 NDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENR-AKMPAHRFAINLSPTSVCQA 593 L+ P F+ VA E G I WVI+ + +A+ R +P A+NLS Q Sbjct: 723 ELGLLGPVRFIEVAEERGFIVQIGNWVIQEACRQLAQWRRQGLPRISLAVNLSTLQFRQQ 782 Query: 594 RFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYA 653 V + + L+ + + L EVTES + +V+ T+ ++ +G Q++IDDFGTGY+ Sbjct: 783 DLAVHLQRALSAHGLVGSDLDVEVTESVIMDDVETTIHTIDRIKSMGLQLSIDDFGTGYS 842 Query: 654 SYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREA 713 S + LK AD LKID SF+R+I ++ D I +I ++A+ M V+AE VE E + Sbjct: 843 SLSYLKRFKADKLKIDRSFVRDIPMDADDSAIARAIINMAKNLNMTVIAEGVETIEQWKF 902 Query: 714 VLSLGIDYMQGYLIGKPQPLIDTLNEIEP 742 + G QGYL+ KP P + +E Sbjct: 903 LDREGCHAAQGYLLAKPVPAKEFERLLEK 931 >UniRef50_C4L9X9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L9X9_TOLAT Length = 1101 Score = 529 bits (1364), Expect = e-148, Method: Composition-based stats. Identities = 121/514 (23%), Positives = 219/514 (42%), Gaps = 24/514 (4%) Query: 254 MMWGAMRYGYKLI-----SLLWAVVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFI 308 +++ + ++ ++ SL + I + + I P + + + + ++ Sbjct: 590 VIFKSGKHTHEFYQHIRDSLNTSAFWRGEIWNRRKDNHIIPLICSISAVRNDKQQLTHYV 649 Query: 309 VNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNV--------RALNRALRDAPWSALCYLR 360 Y + ++ +A ++ LA+ DP+ LPN A++ A+R+ AL L Sbjct: 650 SVYSDI--SKLKASEAKLAHLAHHDPLTQLPNRTLLTINLSHAIDLAVRNHHRIALLMLD 707 Query: 361 IPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITA 420 + + + ++G + Q+++ L + + + +L G++ + + + Sbjct: 708 LDRFKDVNDSFGHQIGDALLQEVARRLRRRVRISDTICRLGGDEFTVLIEGNPALHDVEH 767 Query: 421 LDSHLKQF---RFFW-DGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPE 476 + Q F +G + + LL + + A + Sbjct: 768 FAEDILQLLKDPFSLPNGREVIIGASIGISLYPEHGQTPKELLQQAD--AAMYRAKAHGR 825 Query: 477 NMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGE 534 + R + L R + ++ + RLQ+AL N L QP + + + E L+R + Sbjct: 826 SCFRYFSDELTRAAEQRLDLEVRLQRALRLNELCLYFQPQIDISSNRIIGAEALVRWQDP 885 Query: 535 NDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRA-KMPAHRFAINLSPTSVCQA 593 LISP F+PVA E GL + WV+ + E + +PA A+N+SP + Sbjct: 886 AHGLISPAQFIPVAEETGLIKQLGEWVLLEACRQGKEWQQKGLPAINLAVNISPVQFRNS 945 Query: 594 RFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYA 653 V L + A L E+TES +T+ +A L L++ G ++AIDDFGTGY+ Sbjct: 946 NILESVFNALKQTGYPASLLELELTESALMTHENEAVEILSALRKYGIRLAIDDFGTGYS 1005 Query: 654 SYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREA 713 S A LK D+LKID SF+ +I D +I A+I +A ++ V+AE VE EE Sbjct: 1006 SLAYLKRFPLDVLKIDKSFVDDIPHKKDDMEIAAAIVAMAHTLRLKVLAEGVETEEQLTF 1065 Query: 714 VLSLGIDYMQGYLIGKPQPLIDTLNEIEPIRESA 747 + G D QGYL+ P P + E + Sbjct: 1066 LKEQGCDCYQGYLMSPPVPADQFEQLLRAQAEDS 1099 >UniRef50_C6ML43 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Geobacter sp. M18 RepID=C6ML43_9DELT Length = 773 Score = 529 bits (1364), Expect = e-148, Method: Composition-based stats. Identities = 102/433 (23%), Positives = 176/433 (40%), Gaps = 16/433 (3%) Query: 318 RQRAVVRRIQRLAYVDPVVHLPNVRALNR--------ALRDAPWSALCYLRIPGMEMLVK 369 + ++ A DP+ LPN L A R W A+ ++ + + + Sbjct: 198 EHKRYEEQLAYQATHDPLTALPNRNLLADRISQALAWAQRHRRWIAVLFVDLDFFKFVND 257 Query: 370 NYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLKQ-- 427 + G Q + ++ LS + + + G+ + L E +++ Sbjct: 258 SLGHGKGDQLLKMVAERLSERVRQVDTLAHQGGDKFVVVLTDLRGNEEADRAVHVIREAI 317 Query: 428 -FRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYL 486 F DG + + L+ + N R L Sbjct: 318 SLPFLMDGQELVISCSIGITVYPKDGEDAQTLVKNAEVA--MYRAKEQGRNCFRYYTREL 375 Query: 487 QRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSF 544 + +++M L++ALE+ F L QP + E L+R + ++ P SF Sbjct: 376 NERVASRMSMEKHLRKALENEEFELWYQPQADLNTGRLSGMEGLIRWRNAELGMVQPGSF 435 Query: 545 LPVAHEFGLSSSIDMWVIEHTL-QFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLL 603 +P+A E GL I WV+ Q A + A+NLSP ++ +L Sbjct: 436 IPLAEETGLIVQIGEWVVRTACLQNRRWQDAGLSPLTVAVNLSPRQFRDRELTGVIAGVL 495 Query: 604 AKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNA 663 + ++ L E+ ES + +V+ A L L+ LG ++++DDFGTGY+S + LK Sbjct: 496 RETGLDPRYLGLEIVESMVMHDVESAAAMLNELKALGVKLSMDDFGTGYSSLSYLKRFPF 555 Query: 664 DLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQ 723 LKID SF+R+I+++ I SI +A + VVAE VE E E + + G + +Q Sbjct: 556 AKLKIDLSFVRDIMTDPGSAAIAKSIISMAHNLNLSVVAEGVETEGQLEFLRAHGCNEIQ 615 Query: 724 GYLIGKPQPLIDT 736 GY + +P P + Sbjct: 616 GYYLSRPLPAAEF 628 >UniRef50_A1K5S9 GGDEF/EAL-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K5S9_AZOSB Length = 1090 Score = 529 bits (1364), Expect = e-148, Method: Composition-based stats. Identities = 104/444 (23%), Positives = 184/444 (41%), Gaps = 15/444 (3%) Query: 316 ATRQRAVVRRIQRLAYVDPVVHLPNVRA--------LNRALRDAPWSALCYLRIPGMEML 367 T R IQ LA+ D + LPN A L+ A R A+ +L + + + Sbjct: 649 VTSAREAEAHIQYLAHYDSLTGLPNRSAWMNQARSALSLAQRHQHILAVLFLDLDNFKTV 708 Query: 368 VKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLKQ 427 + G + + ++ L+ L + +L G++ L + E A+ + Sbjct: 709 NDSLGHPVGDRLLAAVAQRLAHCLREEDSFARLGGDEFVALLPRVTRAEDAAAVARKMLD 768 Query: 428 F---RFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAM 484 D + P + + S + LL +T + N + Sbjct: 769 ALATPVVIDDHELAPSVSIGISLFPSDGTDVDTLLKHADTA--MYGAKEVGRNNFQFFVP 826 Query: 485 YLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDV--YHEILLRMKGENDELISPD 542 + +++ + N L++A+E N L QP D E L+R + + L+ P Sbjct: 827 EMNTRALERLLLENALRRAIERNELTLHYQPQVAATSDRPNGCEALVRWQHPDFGLVPPA 886 Query: 543 SFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQL 602 F+P+A + GL + WV+ + + +N+S +A F V Q+ Sbjct: 887 QFIPIAEDSGLIVPLGEWVLREACRQQVKWARSGLHLMVGVNISALQFRRADFVDSVVQV 946 Query: 603 LAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVN 662 LA+ ++ E+TES + L+ L +G +A+DDFGTGY+S A LK + Sbjct: 947 LAETGANPERIELEITESALMDASDALSRRLRELANMGLSLALDDFGTGYSSLAYLKRLP 1006 Query: 663 ADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYM 722 LKID SF++++ + D + A+ LAR + VVAE VE R+ +++ G + Sbjct: 1007 IGRLKIDRSFVKDLPGDPEDAAVTAATLSLARDLGLEVVAEGVETVAQRDFLVARGCHTL 1066 Query: 723 QGYLIGKPQPLIDTLNEIEPIRES 746 QGYL +P + ++ E+ Sbjct: 1067 QGYLYSRPLDVAAFEAWMQATEEA 1090 >UniRef50_Q607T2 Sensory box protein/GGDEF domain protein n=2 Tax=cellular organisms RepID=Q607T2_METCA Length = 1346 Score = 529 bits (1364), Expect = e-148, Method: Composition-based stats. Identities = 123/500 (24%), Positives = 206/500 (41%), Gaps = 22/500 (4%) Query: 258 AMRYGYKLISLLW-----AVVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYM 312 + R+G + + +W + + ++ T +T+ + + ++I Sbjct: 835 SGRHGKEYYAAMWRAVDQEGSWQGEFWNRRKNGELFAVLETIVTVRDETGAMVNYIGVAA 894 Query: 313 AVLATRQRAVVRRIQRLAYVDPVVHLPNVR--------ALNRALRDAPWSALCYLRIPGM 364 + + + I LAY DP+ LPN R AL A R A+ +L + Sbjct: 895 DI--SSLKEAEEHIHHLAYYDPLSALPNRRYLMERAEYALALAERRKEELAVVFLDVDHF 952 Query: 365 EMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSH 424 + + + G + + +++ + + V +L G++ AL L D Sbjct: 953 KDVNDSLGHQVGDELLVRVATQIKEFTRETDTVARLGGDEFALLLPDLGRDAVSQVADKI 1012 Query: 425 LKQFR--FFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRG 482 L R F G + LL +T + N R Sbjct: 1013 LAALRKPFEHSGQTFAVTGSIGISLYPHDGTDFETLLRNADTA--MYHAKQQGRNQFRFY 1070 Query: 483 AMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELIS 540 + ++ ++ +++ L++A+ QP + V E L+R + L+S Sbjct: 1071 DPGMNVDILARLTVLSELREAIPAGELRTFFQPEIDLANGTLVGAEALVRWQHPTRGLLS 1130 Query: 541 PDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENR-AKMPAHRFAINLSPTSVCQARFPVEV 599 PD F+PVA L +I WV+E T + +A+ + A +NL+ R V Sbjct: 1131 PDQFIPVAESNDLIIAISDWVLEDTCRHLAQWKKADQAPITVGVNLAARHFRDPRLVPRV 1190 Query: 600 SQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLK 659 LL +Y + L E+TES L Q I LQ L LGC ++IDDFGTGY+S + LK Sbjct: 1191 KSLLCRYGVPGSSLQLELTESTLLDADAQTMIVLQELIALGCSLSIDDFGTGYSSLSYLK 1250 Query: 660 NVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGI 719 N+ LKID SF+R+I ++ D I ++ L + V+AE VE EE R +L G Sbjct: 1251 NLPIATLKIDQSFVRDIAFDADDRTISGTVVALGHSLGLKVIAEGVETEEQRRILLEQGC 1310 Query: 720 DYMQGYLIGKPQPLIDTLNE 739 D+ QGYL +P + + Sbjct: 1311 DFGQGYLFSRPLSSKEFIKW 1330 >UniRef50_Q47ED8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47ED8_DECAR Length = 827 Score = 529 bits (1364), Expect = e-148, Method: Composition-based stats. Identities = 105/460 (22%), Positives = 193/460 (41%), Gaps = 22/460 (4%) Query: 293 TQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNV--------RAL 344 + I + V ++ + V + RA+ ++ LA D + LPN RA+ Sbjct: 359 SAAPIHNRDGQVAGAVIVFHDV--SESRAMALKMAHLAQHDFLTGLPNRALLTERLSRAI 416 Query: 345 NRALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGND 404 +A R + +L + + + + G + Q Q+++ L + + V + G++ Sbjct: 417 GQARRHNKRVGMLFLDLDYFKHINDSLGHAVGDQLLQQVAERLIVCIRDTDTVCRQGGDE 476 Query: 405 LALRLNTESHQERITALDSHL-----KQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLL 459 + L + L + + + + IG+S ++ Sbjct: 477 FVILLAEIEQARDAAPIAEKLLAAFAEPCLIAGNELHVSLSIGISI--YPDDGMDADTVM 534 Query: 460 GELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGM 519 +T + N + + ++ + L++AL F L QP + Sbjct: 535 KNADTA--MYHAKANGRNNYQFFTTEMNTRAVRRLFIEGNLRRALRQGEFMLYYQPKIDL 592 Query: 520 RGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFM-AENRAKM 576 + E L+R + L+ P F+P+A E GL I WV+ + + A + + Sbjct: 593 ASGMMIGSEALIRWQDPEHGLVYPKQFVPIAEESGLIVPIGSWVLREACRQVRAWQESGL 652 Query: 577 PAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHL 636 A ++N+S F V+ +L + + L E+TES + + + + L+ L Sbjct: 653 VAVPVSVNISAVEFRHKDFLEGVALILKETGMLPSYLELELTESILMHDAESSATVLEAL 712 Query: 637 QELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMK 696 + +G Q+AIDDFGTGY+S + LK + LKID SF+ +I + D IV ++ + + Sbjct: 713 KTMGMQLAIDDFGTGYSSLSYLKRFPINTLKIDQSFVHDIAIDPDDASIVGAMIGMGKNL 772 Query: 697 KMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDT 736 K VVAE VE EE + +L D QG+L G+P P + Sbjct: 773 KQRVVAEGVETEEQLAFLRTLHCDEGQGFLFGRPLPADEF 812 >UniRef50_C1DA12 Sensory box/GGDEF family protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DA12_LARHH Length = 1041 Score = 529 bits (1364), Expect = e-148, Method: Composition-based stats. Identities = 114/442 (25%), Positives = 191/442 (43%), Gaps = 23/442 (5%) Query: 312 MAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL--------RDAPWSALCYLRIPG 363 T Q+ +I+R A+ D + L N AL R L + A+ ++ + Sbjct: 575 TVNDVTDQKENEEQIERYAHFDALTGLANRHALYRRLGQAITSVHQHQHPLAVLFVDLDK 634 Query: 364 MEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDS 423 + + G + ++++ LS P + + +L G++ L L + Sbjct: 635 FKTINDTLGHAVGDVVLREVAGRLSDFAGPDDILARLGGDEFLLVLPGADERAASEVAAC 694 Query: 424 HLK----QFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIV--TNAPEN 477 L R +P P IGVS +L A++++ N Sbjct: 695 ILTAMSVPVRVDGRELPTTPTIGVSLYPRDGEEAD------DLIRNADIAMYQAKARGRN 748 Query: 478 MQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGEN 535 + + +++ + L+ A L QP + V E L+R K Sbjct: 749 TFQLYTPDMNAAAAERLQLQGELRNAHLRGEIMLHYQPQIDVTDGHVVGCEALMRWKHPT 808 Query: 536 DELISPDSFLPVAHEFGLSSSIDMWVIEHTLQF-MAENRAKMPAHRFAINLSPTSVCQAR 594 ++SP F+P+A E GL ++ W I + M RA +P A+NLS Q+ Sbjct: 809 LGMVSPGRFIPLAEESGLIITLGNWAIREACRQAMVWQRAGLPPLTVAVNLSGCQFQQSN 868 Query: 595 FPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYAS 654 F V+ LA + L E+TES + +V+Q TL L+ LG Q++IDDFGTGY+S Sbjct: 869 FTAVVADALADTSLPPQYLELELTESIVMHDVEQVIATLTELKALGVQLSIDDFGTGYSS 928 Query: 655 YARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAV 714 LK DLLKID F+R++ ++ D IV +I L ++ + ++AE VE + + + Sbjct: 929 LNYLKRFPVDLLKIDQGFVRDVETDPSDAAIVRAIIALGKILNLRLIAEGVETQGQLDYL 988 Query: 715 LSLGIDYMQGYLIGKPQPLIDT 736 + G+D++QGY +P P D Sbjct: 989 HAAGVDFIQGYYFSRPLPAEDM 1010 >UniRef50_B5E7Y8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Geobacter RepID=B5E7Y8_GEOBB Length = 704 Score = 529 bits (1363), Expect = e-148, Method: Composition-based stats. Identities = 103/472 (21%), Positives = 194/472 (41%), Gaps = 30/472 (6%) Query: 291 YTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRD 350 + +T+ + T ++ +I+ LAY D + LPN R + L Sbjct: 229 HAELVTVLDEQGEAVCLTGTIQDI--TERKRAEEQIRLLAYYDALTGLPNRRFFLQQLEQ 286 Query: 351 A--------PWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQ--- 399 A A+ +L + +++ G + + Q ++ L + G+ + + Sbjct: 287 ALVFANRYDRMLAVLFLDLDRFKLVNDTLGHGVGDRLLQDVADRLLRCVRRGDCLARADE 346 Query: 400 ---------LSGNDLALRLNTESHQERITALDSHLKQ---FRFFWDGMPMQPQIGVSYCY 447 L G++ + L+ H + + + + + + +G + + Sbjct: 347 ECPPSLVSRLGGDEFTIMLSDIEHFQDVAKIARRILEAVSVPYSLEGQEVFVSTSIGISL 406 Query: 448 VRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHN 507 L+ + + N + + + +++ + ++L +AL+ Sbjct: 407 YPFDATTASDLIRNADGA--MYQAKEQGRNGYQIYDESMNAKALERIILESQLHKALKEE 464 Query: 508 HFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHT 565 F + QP + V E L+R + L+ P FLP+A E GL ID WV+ Sbjct: 465 EFIVYYQPQVSNQSGRVVGIEALVRWNSKELGLVEPGRFLPLAEEIGLVIQIDQWVMREA 524 Query: 566 LQFMA-ENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALT 624 + A P AIN+S + V+ +L + ++ L E+TE + Sbjct: 525 CRQHKLWLDAGFPPVTLAINISGQQFMKNELLETVTSVLKESGLDPGLLELELTEGVLMA 584 Query: 625 NVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQ 684 + ++ TLQ L+ +G ++AIDDFGTG++S + LK D+LKID +FI +I ++ D Sbjct: 585 HTERTVKTLQALKGMGVRLAIDDFGTGFSSLSYLKRFPLDVLKIDRTFINDITTDPDDAA 644 Query: 685 IVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDT 736 I + +A K+ V+AE VE + + + G D QGYL KP P + Sbjct: 645 ITLATIEMAHTMKLKVIAEGVETKPQLDFLTKNGCDMYQGYLFSKPVPSTEL 696 >UniRef50_Q2W154 Putative uncharacterized protein n=2 Tax=Magnetospirillum RepID=Q2W154_MAGSA Length = 802 Score = 529 bits (1363), Expect = e-148, Method: Composition-based stats. Identities = 112/496 (22%), Positives = 201/496 (40%), Gaps = 18/496 (3%) Query: 258 AMRYGYKLISLLWAVVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLAT 317 A Y L + + ++ Y T I +V F+ + T Sbjct: 303 ASLYRDMWHCLASGATWQGELCNRAKDGSLFWEYATISPIRDDDGVVTHFMA--VKENIT 360 Query: 318 RQRAVVRRIQRLAYVDPVVHLPNVRALNR--------ALRDAPWSALCYLRIPGMEMLVK 369 +++ +++ A D + LPN L A R+ L +L + +++ Sbjct: 361 QRKETEQQLVHQATHDTLTGLPNRLLLEDRVHHAIEVAKREGRRIGLMFLDLDRFKIVND 420 Query: 370 NYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLK--- 426 + G + + + +S L L + V +L G++ + L + + + Sbjct: 421 SLGHVAGDELLKVVSDRLRHTLRRSDTVARLGGDEFVVVLTHFQSTTELAEVAEKISAAL 480 Query: 427 QFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYL 486 G + + ++ L+ + +T + N + Sbjct: 481 DEPVELSGHKVHVGASIGIAIYPDDGDNFNALMKDADTA--MYRAKQKGRNTFCFYDSNM 538 Query: 487 QRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSF 544 E D++ + L++AL F L QP ++ E L+R +SP F Sbjct: 539 NDEALDRLKLEEALRRALVRGEFQLFYQPQVDLQTGRTSGVEALIRWNSPERGQVSPALF 598 Query: 545 LPVAHEFGLSSSIDMWVIEHTLQFMAENR-AKMPAHRFAINLSPTSVCQARFPVEVSQLL 603 +PVA E L S I WV+E + + +A R A + + A+N+S +S L+ Sbjct: 599 IPVAEESNLISMIGWWVLEESCRQIAAWREAGLTGIKVAVNVSGRQFLNHALVECISDLM 658 Query: 604 AKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNA 663 A+Y + QL E+TES + +A L L+E+G Q+++DDFGTGY+S + LK + Sbjct: 659 AQYAVLPSQLEIELTESTVMAEPDRAIEQLTRLREIGIQVSVDDFGTGYSSLSYLKRLPL 718 Query: 664 DLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQ 723 +K+D SF+R++ + S + IV++I LA M +VAE VE E + + G +Q Sbjct: 719 STIKVDRSFVRDVNNQSDNAAIVSAILGLADALDMSIVAEGVETEGEEQHLKDAGCIKVQ 778 Query: 724 GYLIGKPQPLIDTLNE 739 G+ KP P Sbjct: 779 GFRYAKPMPADQLAAW 794 >UniRef50_C4L987 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L987_TOLAT Length = 1098 Score = 529 bits (1363), Expect = e-148, Method: Composition-based stats. Identities = 114/503 (22%), Positives = 209/503 (41%), Gaps = 24/503 (4%) Query: 254 MMWGAMRYGYKLISLLWAVV-----LMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFI 308 ++ + ++ + + + + + + P T+ + S+ + +I Sbjct: 574 RIFHSGKHDGHFYQQMLQALDEHGFWRGEMWNRRQNGELLPMMTSINPVCDSNGEILYYI 633 Query: 309 VNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNV--------RALNRALRDAPWSALCYLR 360 Y + ++ + R++ +A DP+ LPN AL A+ ++ AL L Sbjct: 634 SIYTDI--SQLKDSEARLEHMALHDPLTGLPNRAMLGQKLDSALQHAMLNSTRVALLMLD 691 Query: 361 IPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITA 420 + + + ++G + ++S L L + V +L G++ + L + ++ Sbjct: 692 LDHFKNVNDSFGHHFGDELLHQVSARLKQQLRESDVVCRLGGDEFTVLLQNNPSPDDVSL 751 Query: 421 LDSH----LKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPE 476 L L Q + + + + L+ + +T + + Sbjct: 752 LAERIIHALHQPFLLSNAREVMIGTSIGISLYPEHGSTAEELMQQADTA--MYRAKHDGR 809 Query: 477 NMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGE 534 + R + L + K ++ + RL +A+ F + QP ++ + + E LLR Sbjct: 810 DGYRYFSEELFLKAKARLELEQRLHRAITGQEFKVFYQPQISIKTNQIIGAEALLRWDDP 869 Query: 535 NDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAEN-RAKMPAHRFAINLSPTSVCQA 593 LI P F+ VA E GL +I WV+ T + + +P A+NLSP + Sbjct: 870 EYGLIPPSEFISVAEETGLIQNIGEWVLYETCRQGRDWLDQHLPPINLAVNLSPLQLHHG 929 Query: 594 RFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYA 653 + +L A L E+TES + ++ LQ L++ G +IAIDDFGTGY+ Sbjct: 930 DVRQLIGTILHNSGFPAHHLELELTESALMEQQEETVKILQGLRQQGIRIAIDDFGTGYS 989 Query: 654 SYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREA 713 S A LK D+LKID F+ +I D +I A+I + ++ V+AE VE + E Sbjct: 990 SLAYLKQFPLDVLKIDKRFVEDIPHERDDMEIAATIVAMGHSLRLTVLAEGVETKAQLEF 1049 Query: 714 VLSLGIDYMQGYLIGKPQPLIDT 736 + G DY QGYL P P + Sbjct: 1050 LEQQGCDYYQGYLYSMPLPAEEF 1072 >UniRef50_Q5P4K8 Putative sensory box/GGDEF family protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P4K8_AZOSE Length = 698 Score = 529 bits (1363), Expect = e-148, Method: Composition-based stats. Identities = 116/455 (25%), Positives = 195/455 (42%), Gaps = 20/455 (4%) Query: 296 TITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRD----- 350 + + S V FI V T + +R+ A D + LPN LN + Sbjct: 239 PVENESGDVTHFIGVLNDV--TARTHAEKRLIHQASHDALTGLPNRNLLNDRITHAIARS 296 Query: 351 -APWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRL 409 +A+ +L + +++ +YG + +++++ +S L G+ V +L G++ + L Sbjct: 297 RGRLTAVMFLDLDRFKLVNDSYGHAVGDALIREVANRVSACLRAGDTVARLGGDEFVVLL 356 Query: 410 NTESHQERITALDSHLKQ-----FRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNT 464 + E L + L+ R +P+ IGV+ +LL + Sbjct: 357 EDLASIEDAARLAAKLRDRLSESVRIGSLELPLSASIGVALAPRDG--RDPEMLLKNADI 414 Query: 465 VAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDV- 523 + N + + ++ + + L++AL QP + Sbjct: 415 A--MYRAKERGRNNYCFYGPEMDHHARRRLTVESELRRALAGGELEAHYQPQVDLATGAL 472 Query: 524 -YHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENR-AKMPAHRF 581 E L+R + L+ P F+ VA E GL + V+ + R A P + Sbjct: 473 TGAEALVRWRHPERCLLLPGEFIAVAEETGLIVPLGEQVLRAACRQSTRWREAGRPDLKV 532 Query: 582 AINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGC 641 A+NLS Q +V +LA+ A QL E+TES A+ + + TL L+ G Sbjct: 533 AVNLSGHQFRQHDLVEQVCDILAETGAHAAQLELEITESVAMADADGSVATLAGLRRQGI 592 Query: 642 QIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVV 701 +AIDDFGTGY+S + LK D LKID SFI+ I ++ D IV +I +AR ++ ++ Sbjct: 593 ALAIDDFGTGYSSLSYLKRFPIDTLKIDRSFIQGIPADGDDTAIVQAIIAMARSLRLSLL 652 Query: 702 AEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDT 736 AE VE RE +++ G QG+L G+ P D Sbjct: 653 AEGVETPAQREFLVAQGCRSGQGFLFGRAMPAEDF 687 >UniRef50_Q0ACK6 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0ACK6_ALHEH Length = 857 Score = 529 bits (1363), Expect = e-148, Method: Composition-based stats. Identities = 112/505 (22%), Positives = 197/505 (39%), Gaps = 21/505 (4%) Query: 254 MMWGAMRYGYKLISLLWAVVL-----MISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFI 308 + + G + +W + + + + YP + +T+ + V +I Sbjct: 347 RLLQSGHQGPRFYREMWEALKSRGHWQGELWNRRADGETYPSLLSVSAVTNDNDEVTHYI 406 Query: 309 VNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL-------RDAPWSALCYLRI 361 + T +A + I LA+ D + L N R L L R AL +L + Sbjct: 407 GIASDI--TSHKAAEQHIDYLAHYDTLTGLGNRRLLEEELERMLRNARGGRPFALFFLDL 464 Query: 362 PGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITAL 421 + + G + ++++ L L P + ++ G++ A+ SH++ Sbjct: 465 DRFKNINDTLGHESGDRLLEEVADRLRDLAGPQATLCRIGGDEFAILAPGLSHRQTAGIA 524 Query: 422 DSHLKQF--RFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQ 479 ++ + P+ V L+ +T L V N Sbjct: 525 RQLVEGISRPYEITERPLVVTCSVGVAVHPRDGTRREALISAADTA--LHYVKAHGSNHY 582 Query: 480 RRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMR--GDVYHEILLRMKGENDE 537 + + +++ + N L++AL F L QP+ E LLR Sbjct: 583 QFHEPGMTAAAAERLHLENDLREALLRGEFELYYQPVLDTERLTVCGAEALLRWHHPEAG 642 Query: 538 LISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRA-KMPAHRFAINLSPTSVCQARFP 596 LI PD F+P+A E GL I WV+ A R + ++N+S + P Sbjct: 643 LIPPDRFIPLAEETGLIRPIGTWVLREACAQAARWRRLGLTGMTVSVNVSGEQFWRDELP 702 Query: 597 VEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYA 656 V Q L + L+ E+TES + + L+ L+ +G +++DDFGTGY+S + Sbjct: 703 QAVRQALEAQALAPDALVLEITESVLMHGSANTETRLRELKAMGVGLSLDDFGTGYSSLS 762 Query: 657 RLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLS 716 LK D LKID SF+R++V + D + ++ + + VVAE VE+ E + Sbjct: 763 YLKRFPIDTLKIDKSFVRDMVRDEHDRTLAQTVIAMGHGLGLQVVAEGVESAEHLPLLRR 822 Query: 717 LGIDYMQGYLIGKPQPLIDTLNEIE 741 D +QGY +P P I+ Sbjct: 823 ARCDRVQGYHFSRPLPARALSRWIQ 847 >UniRef50_C4ZM30 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4ZM30_THASP Length = 1002 Score = 528 bits (1362), Expect = e-148, Method: Composition-based stats. Identities = 122/509 (23%), Positives = 211/509 (41%), Gaps = 30/509 (5%) Query: 254 MMWGAMRYGYKLISLLWAVVLMISIHSYQ-----NYIPIYPGYTTQLTITSSSYLVFSFI 308 + A + + LWA + + + Y T I + V ++ Sbjct: 495 RLLNAGKTSAATYADLWATLGRGEVWRGEFINTRKDGGTYTELATIAPIKQADGSVSHYV 554 Query: 309 VNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRDAPWSA--------LCYLR 360 + T +R RI++LAY D + LPN + LR A ++ L L Sbjct: 555 AIKEDI--TGRREAEARIRQLAYYDTLTGLPNRSLMWDRLRHAIAASARSGASGMLMLLD 612 Query: 361 IPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQE---- 416 I ++L G + ++++ L L + V ++ +D A+ + Sbjct: 613 IDHFKLLNDTQGHEVGDALLREVAQRLRGALREEDTVARVGDDDFAIVVENLGADRDEAI 672 Query: 417 -RITALDSHL-----KQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSI 470 R + HL P + R +L + ++ Sbjct: 673 GRAEKIAEHLHRCVTAPCELGLASGPYHVGASLGLTLFRGRNAAADAVLKQAEVA--VAR 730 Query: 471 VTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDV-YHEILL 529 + N+ R + +Q + + + +L+ AL N F L QP G V E L+ Sbjct: 731 AKDDGRNLIRFFSEAMQAVVAARAELELKLRAALACNGFRLYYQPQLDRNGRVIGAEALI 790 Query: 530 RMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRA--KMPAHRFAINLSP 587 R E+ISP +F+P+A E GL I WV+E + + +IN+S Sbjct: 791 RCFDAEGEMISPAAFIPLAEETGLIVPIGEWVLETACAQLRAWQRTPSTAGLSLSINVSA 850 Query: 588 TSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDD 647 Q F +V+ + +++I L E+TES + +++ + ++ ++ LG + A+DD Sbjct: 851 RQFHQPDFVGKVAAAIERHRIRPGGLEIELTESVVIGDIETTVLRMRQIKALGVRFALDD 910 Query: 648 FGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVEN 707 FGTGY+S + LK + D LKID F+R++ ++ IV +I L+R + VVAE VE Sbjct: 911 FGTGYSSLSYLKRLPFDQLKIDQMFVRDMEKDTSSEAIVRAILALSRSLDLKVVAEGVET 970 Query: 708 EEIREAVLSLGIDYMQGYLIGKPQPLIDT 736 E +L+ G + QGYL G+P P+ D Sbjct: 971 AAQHELLLTRGCELFQGYLFGRPVPIEDW 999 >UniRef50_A0L8C6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacteria RepID=A0L8C6_MAGSM Length = 720 Score = 528 bits (1362), Expect = e-148, Method: Composition-based stats. Identities = 97/493 (19%), Positives = 189/493 (38%), Gaps = 23/493 (4%) Query: 258 AMRYGYKLISLLWAVVLMIS-----IHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYM 312 + R+ + +W +L + + + IYP + I + S++ + Sbjct: 209 SGRHDRRFYGKMWQTLLTAGKWQGEVWNRRKNGEIYPQWVNISAIRTGDGQTESYVGVFT 268 Query: 313 AVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRD--------APWSALCYLRIPGM 364 + TR + + L+ D + LPN + L A+ + + Sbjct: 269 DL--TRIKESEENLLYLSGHDALTELPNRLLFHDRLNQTLVESADSGSIVAVLIVDLDRF 326 Query: 365 EMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSH 424 +++ + G + +++ L + + +L G++ + L + L Sbjct: 327 KVINDSMGHEVGDSLLCEVATRLRAICPAKATLARLGGDEFGIVLPNMTQNRDAALLAQE 386 Query: 425 L---KQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRR 481 + + + +L+ + + + N + Sbjct: 387 VLTRVAQPITISEVEFAVGASIGMTVYPLDGEKPSVLMRNAESA--MYHAKQSGRNNFQF 444 Query: 482 GAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELI 539 L ++ + + L+ A++ F L QP + + E L+R + ++ Sbjct: 445 YRSELNTASLARILLESGLRNAVDRQEFLLFYQPQMELATGKLIGMEALIRWQHPEQGMV 504 Query: 540 SPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMP-AHRFAINLSPTSVCQARFPVE 598 SP F+P+A E GL + W ++ + + R ++NLS F Sbjct: 505 SPGEFIPLAEETGLVIPMGQWALKEACRQSKVWMDQTGVPLRISVNLSGIQFRLPDFTEM 564 Query: 599 VSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARL 658 V + + + + L E+TES A+ +V++ L L G +AIDDFGTG++S + L Sbjct: 565 VMRTVGESGLPPHCLELELTESIAMGDVEETLEKLTILSRFGVLLAIDDFGTGFSSLSYL 624 Query: 659 KNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLG 718 K D LKID SF+RN + D I+ + +LA + V+AE VE+ E E + Sbjct: 625 KKFPIDTLKIDQSFVRNCTRDPEDAAIIRAFINLAHSLNLEVIAEGVEHLEQLEFLAQES 684 Query: 719 IDYMQGYLIGKPQ 731 D +QGY G+P Sbjct: 685 CDEIQGYFYGRPL 697 >UniRef50_Q7NYX4 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NYX4_CHRVO Length = 795 Score = 528 bits (1361), Expect = e-148, Method: Composition-based stats. Identities = 118/483 (24%), Positives = 211/483 (43%), Gaps = 26/483 (5%) Query: 270 WAVVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRL 329 W ++ + YP + + L+ +++ + + T+++ R+Q L Sbjct: 309 WQGEML----DRRKGGQWYPAELSISALRDEDGLLSNYVAVFSDI--TQRKEAEERLQFL 362 Query: 330 AYVDPVVHLPNVRALNRALRDAP--------WSALCYLRIPGMEMLVKNYGIMLRIQYKQ 381 A DP+ LPN L +L +A A+ ++ + +++ ++G + Q Sbjct: 363 ANHDPLTRLPNRSRLTASLDEALTRMDGEDGRLAVMFIDLDRFKLINDSFGHQVGDQLLC 422 Query: 382 KLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHL-----KQFRFFWDGMP 436 +++ LS ++ + +L G++ L ++ ++ + S + K + Sbjct: 423 EIAIRLSRVVGERGMLARLGGDEFTLLMSGFDSHHQLADMASDILAALGKPLCLEAHEVF 482 Query: 437 MQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAM 496 + IG+S L N + A +N + + + + +++ + Sbjct: 483 ITGSIGISVFPHDGRDARTLL----KNADVAMYRAKEAGKNTYQFFDIGMNTQTFERLLL 538 Query: 497 MNRLQQALEHNHFFLMAQPITGM--RGDVYHEILLRMKGENDELISPDSFLPVAHEFGLS 554 N L+ ALE + F L QP R E LLR + L+ P F+ +A E GL Sbjct: 539 ENGLRMALERHEFELHYQPQLSAGERALAGAEALLRWRHPQLGLVPPARFIALAEETGLI 598 Query: 555 SSIDMWVIEHTLQFMAENRAK-MPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQL 613 I WV+ + +A A+ + R A+NLSP Q P +V+ L + A +L Sbjct: 599 KPIGDWVLREACRQLAAWDAQGLRVPRLAVNLSPRQFGQPSLPAKVAGALQAAGLAAGRL 658 Query: 614 IFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFI 673 E+TES + + +A L L+ LG ++IDDFGTGY+S + LK D LKID SF+ Sbjct: 659 ELEITESMIMQSPTEAVSLLSELKSLGVWLSIDDFGTGYSSLSHLKRFPLDTLKIDQSFV 718 Query: 674 RNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPL 733 + + + I +I +A+ K VVAE VE+EE + G +QGY G+P P Sbjct: 719 EGLPDDDDNAAIAEAILAMAKKLKFQVVAEGVESEEQAAFLEGKGCHVLQGYHFGRPLPA 778 Query: 734 IDT 736 + Sbjct: 779 GEF 781 >UniRef50_A6WKV6 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=6 Tax=Shewanella RepID=A6WKV6_SHEB8 Length = 921 Score = 528 bits (1361), Expect = e-148, Method: Composition-based stats. Identities = 130/505 (25%), Positives = 221/505 (43%), Gaps = 28/505 (5%) Query: 254 MMWGAMRYGYKLISLLWAVVLM-----ISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFI 308 ++ + R+ LW +L I + + I+P T TI V F+ Sbjct: 418 RIFSSGRHDKAFFDKLWNALLANGKWNGEIWNRRKNGTIFPQNITISTIYDEVGDVRYFV 477 Query: 309 VNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALN--------RALRDAPWSALCYLR 360 + + A Q+ ++ LAY DP+ HLPN +A R A + Sbjct: 478 AVFADISA--QKENEAQLTHLAYFDPLTHLPNRMKFMMQLKQEVRQAKRLNLQLATVMID 535 Query: 361 IPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITA 420 + + + ++G + + +L+ L + + + ++ G++ ++ + E T Sbjct: 536 VDLFKHINDSFGHSIGDEMLVELAKRLRSQVGDQDVLSRIGGDEFVALISGIDNNEDATV 595 Query: 421 LDSHLKQ------FRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNA 474 + L+Q D + + +GVS Y + LL N A + N Sbjct: 596 AINQLRQVFEQPFIVSTGDHLRLTASMGVSL-YPNDGTDADTLLR---NADAAMYRAKND 651 Query: 475 PENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGM--RGDVYHEILLRMK 532 N L ++ + + + + L A+E N +LM QP + R V E LLR Sbjct: 652 GRNNYAFYTESLTQQSFEHLKLQSALYGAIEQNALYLMYQPKLDLVSRKTVGFEALLRWH 711 Query: 533 GENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQF-MAENRAKMPAHRFAINLSPTSVC 591 LISP F+PVA + GL I +WV+E + M R R A+N++ + Sbjct: 712 DPQLGLISPAVFIPVAEKIGLIHEIGLWVLETACRQGMRWLREGKHFGRIAVNVAGQQLQ 771 Query: 592 QARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTG 651 ++ F +V ++LA+ + A L EVTES + N A L+ L +LG ++++DDFGTG Sbjct: 772 RSSFVDDVKRVLAETGLPAKHLELEVTESVMMQNPDLAIRDLKRLGDLGIELSVDDFGTG 831 Query: 652 YASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIR 711 Y+S LK + LKID SF+R+I ++ + I ++ L K+ ++AE VE +E Sbjct: 832 YSSLNYLKKLPIHKLKIDQSFVRDIPFDTNNTAIAKAVIALGHALKLDIIAEGVETKEQA 891 Query: 712 EAVLSLGIDYMQGYLIGKPQPLIDT 736 + + D QGYL +PQ D Sbjct: 892 DFLQQNQCDQAQGYLFSRPQLPEDL 916 >UniRef50_A3JAM8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Marinobacter sp. ELB17 RepID=A3JAM8_9ALTE Length = 756 Score = 528 bits (1361), Expect = e-148, Method: Composition-based stats. Identities = 129/490 (26%), Positives = 202/490 (41%), Gaps = 30/490 (6%) Query: 275 MISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDP 334 + +I+ Y PI G T + F+V + T+++ I++LAY DP Sbjct: 276 LDAINKYGTVFPIEIGMTQMPPLGD-----IDFVVIVRDI--TQRKKREDEIRQLAYYDP 328 Query: 335 VVHLPNVRALNRAL--------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHW 386 + LPN R L L R + ++AL +L + + L + G +++ Sbjct: 329 LTRLPNRRLLKDRLQQVIANCGRQSRYAALFFLDLDNFKNLNDSLGRTKGDLLLCQVAAR 388 Query: 387 LSPLLEPGEDVYQLSGNDLALRLNTESHQERIT---------ALDSHLKQFRFFWDGMPM 437 L + G+ V +L G++ + + S ++ L Q +F DG P Sbjct: 389 LIESVRHGDTVSRLGGDEFVVLIEGLSSDRNEAAVQVEAAAGKINVQLTQ-KFDLDGSPY 447 Query: 438 QPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMM 497 + S + + LL + + L A + +Q + AM Sbjct: 448 NGSASIGVTTFNSNDSSLEDLLKQADMA--LYKAKAADHSSVHFFDPQMQVVASLRAAMQ 505 Query: 498 NRLQQALEHNHFFLMAQPITGMRGD-VYHEILLRMKGENDELISPDSFLPVAHEFGLSSS 556 L +AL N F L Q + E LLR ISP F+P+A E GL Sbjct: 506 QDLYEALRKNQFQLHYQKQIDQHEGLIGVEALLRWAHPTKGFISPAQFIPLAEETGLIVP 565 Query: 557 IDMWVIEHTLQFMAENRA--KMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLI 614 I WV+ Q +A+ + A+N+S + V L + L Sbjct: 566 IGEWVLREACQTLAQWASDPAKANLTIAVNISVVQFNKKDIVHTVLNALNASGAKPHNLK 625 Query: 615 FEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIR 674 E+TES ++V+ ++ + LQ G +IDDFGTGY+S LK + LKID SF+R Sbjct: 626 LEITESLLASDVENVKVKMLELQRHGVTFSIDDFGTGYSSLFYLKQLPLHQLKIDQSFVR 685 Query: 675 NIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLI 734 +I+++ D I ++ LA + V+AE VE E R + LG QGYL GKP L Sbjct: 686 DIINSPNDQAIAQAVITLAIAMHLNVIAEGVETEAQRAMLQDLGCGAYQGYLFGKPCALQ 745 Query: 735 DTLNEIEPIR 744 D E + R Sbjct: 746 DLFIETQERR 755 >UniRef50_A1W8G6 Diguanylate cyclase/phosphodiesterase n=7 Tax=Comamonadaceae RepID=A1W8G6_ACISJ Length = 756 Score = 528 bits (1360), Expect = e-148, Method: Composition-based stats. Identities = 112/480 (23%), Positives = 193/480 (40%), Gaps = 21/480 (4%) Query: 267 SLLWAVVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRI 326 +W V+ + Q + G Q + + + + N + RQR RI Sbjct: 269 GSIWIVMDVSERLRIQRQLAGMHGELEQ-QVRDRTRELQETVGNLHREIQDRQR-DQERI 326 Query: 327 QRLAYVDPVVHLPNVRALN--------RALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQ 378 +A+ D + LPN L +A A+ +L + + + + G + Sbjct: 327 YWMAHYDALTELPNRVLLAERGQDAIRQAQESGAPLAVMFLDLDNFKHVNDSLGHRIGDA 386 Query: 379 YKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALD----SHLKQFRFFWDG 434 +++ L + + V +L G++ L L + Q + L+ Sbjct: 387 LLVEIAQRLRTTVRQRDTVARLGGDEFVLLLPGANAQGAARVAAKMQEAALQPVHIQHHE 446 Query: 435 MPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKV 494 + + +G++ L+ +T + N R +Q + + Sbjct: 447 LSLALSMGIALFPEHGS--DFETLIQSADTA--MYRAKADGRNSFRFFTPTMQAQSARAL 502 Query: 495 AMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFG 552 + N L++ALE N L QP + E LLR +SP F+PVA + G Sbjct: 503 QLTNALRRALERNQLSLHYQPQVSIATGRVCGVEALLRWHHPELGAVSPAEFIPVAEDTG 562 Query: 553 LSSSIDMWVIEHTLQFMA-ENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAW 611 I WV+ L + + +PA A+NLS Q + V +LLA+Y ++ Sbjct: 563 QILPIGEWVLRTALAQLRTWHSQGLPALTMAVNLSAVQFRQPQLLELVDRLLAEYGVQPH 622 Query: 612 QLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGS 671 L E+TE+ A+ + A T+ L G ++++DDFGTGY+S + LK LKID S Sbjct: 623 LLELELTENVAVADPHAAIATMDQLHAKGVRLSMDDFGTGYSSLSHLKRFQIYRLKIDQS 682 Query: 672 FIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQ 731 F+R++ + D IV++I +A+ M AE VE + G D QG+ +P Sbjct: 683 FVRDLDHDGNDRAIVSAIIRMAQALGMRTTAEGVETAHQLTFLREQGCDEAQGFYFSRPL 742 >UniRef50_B2JN77 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=2 Tax=Burkholderia RepID=B2JN77_BURP8 Length = 915 Score = 528 bits (1360), Expect = e-148, Method: Composition-based stats. Identities = 111/522 (21%), Positives = 216/522 (41%), Gaps = 34/522 (6%) Query: 254 MMWGAMRYGYKLISLLWAVVLMIS-----IHSYQNYIPIYPGYTTQLTITSSSYLVFSFI 308 + + R+ +W + + I + IYP + T + + V ++ Sbjct: 396 RLLSSGRHDAAFFRDMWETIHRVGGWQGEIWDRRKNGEIYPKWLTITAVKAVDGNVTHYV 455 Query: 309 VNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL--------RDAPWSALCYLR 360 + + T ++ +I+ LA+ D + HLPN L L ++ AL ++ Sbjct: 456 GTHYDI--TERKLAEEQIKELAFFDALTHLPNRTLLRDRLKQVIALSAQNHTHGALLFVD 513 Query: 361 IPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNT------ESH 414 + + L G +++ L + G+ V ++ G++ + L+ E+ Sbjct: 514 LDNFKTLNDTLGHDKGDLLLGQVAVRLLGSVREGDTVARMGGDEFVIVLSDLSRNRDEAA 573 Query: 415 QERITALDSHLKQF--RFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVT 472 E A + L ++ G + + + EL ++L++ Sbjct: 574 SETEGAAEKVLTALSRPYYLAGTEFRTTASIGATLFTGH----ETSIDELLKQSDLAMYK 629 Query: 473 NA--PENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPIT-GMRGDVYHEILL 529 + N +Q + ++ A+ L++A++ + + Q E L+ Sbjct: 630 SKESGRNAICFFDPAMQTVVMERAALEAALRRAIDEDQLLVHYQAQVLNGNRVTGAEALV 689 Query: 530 RMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAEN--RAKMPAHRFAINLSP 587 R + L+ P F+P+A E GL ++ V++ + +A+ R A+N+S Sbjct: 690 RWQHPQHGLVPPAEFIPLAEETGLILALGDRVLDTACRQLAQWSLRPDRAHLSIAVNVSA 749 Query: 588 TSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDD 647 + + F V + LA+ + +L E+TES + NV+ + L+ G ++DD Sbjct: 750 QQLRENSFVTSVLEALARTGADPSRLKLELTESVLVDNVEDIIRKMTLLRTKGVVFSLDD 809 Query: 648 FGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVEN 707 FG GY+S + LK + LKID SF+R+++ + D I +I LA+ + V+AE VE Sbjct: 810 FGVGYSSLSYLKRLPLGQLKIDRSFVRDVLDDPNDAVIARAIVALAQSLGLGVIAEGVET 869 Query: 708 EEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPI--RESA 747 + R+ + G QGYL +P P+ D + RESA Sbjct: 870 QAQRQFLADAGCHAYQGYLFCRPLPIEDFEAFADTFDSRESA 911 >UniRef50_C6P6X8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6X8_9PROT Length = 713 Score = 527 bits (1359), Expect = e-148, Method: Composition-based stats. Identities = 127/492 (25%), Positives = 210/492 (42%), Gaps = 46/492 (9%) Query: 290 GYTTQLTITSSSYLVFSFIVNYMAVLAT-RQRAVVRR-----------IQRLAYVDPVVH 337 + SS + S + + RA ++R +Q A DP+ Sbjct: 227 NHIRLTAERDSSGRLTSVLAIGRDITELYESRAALKRANAQLENMNDLLQSQATSDPLTG 286 Query: 338 LPNVRALNRAL--------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSP 389 LPN R + L R AL ++ + + L G + Q Q+++H L Sbjct: 287 LPNRRFMLDRLKHALASSSRSGREGALLFIDLDNFKTLNDTLGHDVGDQLLQQVAHRLET 346 Query: 390 LLEPGEDVYQLSGNDLALRLNTESHQERITALDSHL----------KQFRFFWDGMPMQP 439 + G+ V +L G++ + L S ++ A + + ++ P Sbjct: 347 CVREGDTVARLGGDEFVVMLEDLSEKDLEAAAQTEAVGEKILAALNQPYQLGKHEYRNTP 406 Query: 440 QIGVSYCYVRSPVNHIYLLLGELNTVAELSIV--TNAPENMQRRGAMYLQRELKDKVAMM 497 IG + N L EL A++++ A N R +Q + + + Sbjct: 407 SIGATLF------NDHQQSLDELLKQADIAMYQAKRAGRNALRFFDPQMQETINSRATLE 460 Query: 498 NRLQQALEHNHFFLMAQPITGM------RGDVYHEILLRMKGENDELISPDSFLPVAHEF 551 N L++ALE + F+L Q E L+R L+SP F+P+A E Sbjct: 461 NELRKALELHQFYLFYQVQVDSVQEDGSHRATGAEALIRWAHPERGLVSPAQFIPLAEET 520 Query: 552 GLSSSIDMWVIEHTLQFMAENR--AKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIE 609 GL I +WV++ + + A A+N+S Q F +V + ++ I+ Sbjct: 521 GLIVPIGLWVLDTACAQLKTWQHDALTRGLVLAVNVSAKQFRQPDFVAQVDAAVQRHGID 580 Query: 610 AWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKID 669 L E+TES L N++ T+ L+E+G + ++DDFGTGY+S LK + D LKID Sbjct: 581 PKLLKLELTESLLLENIQDTIATMNALREIGIRFSLDDFGTGYSSLQYLKQLPLDQLKID 640 Query: 670 GSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGK 729 SFI ++VS+S D IV +I +A+ + V+AE VE E R+ +L G + QGYL K Sbjct: 641 QSFICDLVSDSSDRAIVRTIIAMAQSLNLNVIAEGVETEAQRQILLEKGCIHHQGYLFSK 700 Query: 730 PQPLIDTLNEIE 741 P P+ ++ Sbjct: 701 PVPINQFEAQLR 712 >UniRef50_B8H3B9 Sensory box/GGDEF family protein n=5 Tax=Caulobacteraceae RepID=B8H3B9_CAUCN Length = 748 Score = 527 bits (1359), Expect = e-148, Method: Composition-based stats. Identities = 107/455 (23%), Positives = 191/455 (41%), Gaps = 20/455 (4%) Query: 295 LTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNV--------RALNR 346 + + ++ +++ +A ++ +I RLA+ DP+ LPN AL R Sbjct: 246 IALLNAEGRA-EYLLGVSEDIA-ERKRAEAQIARLAHYDPLTDLPNRVLFQKSLGEALAR 303 Query: 347 ALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLA 406 R A+ ++ + + + G L + + L + G+ V +L G++ A Sbjct: 304 RSRKGDALAVHFVDLDRFKTVNDTLGHPLGDALLKIAAERLRGCVREGDTVARLGGDEFA 363 Query: 407 LRLNTESHQERITALDSHLKQF---RFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELN 463 + T L + + + F G + V + + LL + + Sbjct: 364 IVQTGLDDSNGATRLAARIVEAMAAPFDLQGHHVVIGASVGVSLAPTDGDDADELLKKAD 423 Query: 464 TVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD- 522 L + +L+ + A+ L++AL+ F L QP+ + + Sbjct: 424 MA--LYRAKADGRGAYHFFERAMDEQLQARRALELDLRRALQAGEFELFYQPLYHLGDER 481 Query: 523 -VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRF 581 E LLR + ++SP F+P+A E GL + WV+ A R Sbjct: 482 VTGCEALLRWRHPERGMVSPADFIPLAEEIGLIVQLGEWVLRRACAEAANWPEH---VRL 538 Query: 582 AINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGC 641 A+NLSP V LA + A +L E+TES L + + L L+ LG Sbjct: 539 AVNLSPAQFRDRGLVRTVVSALAASGLPAQRLELEITESVLLQDSQANMTMLHDLKALGV 598 Query: 642 QIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVV 701 +I++DDFGTGY+S + L++ D +KID +F+R+I+ +S I+ ++ L ++ Sbjct: 599 RISMDDFGTGYSSLSYLRSFPFDKIKIDQTFVRDILHDSDAMAIIKAVLDLGASMGVVTT 658 Query: 702 AEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDT 736 AE VE + +A+ G +QGY I +P P + Sbjct: 659 AEGVETQAQLDALRQQGCAEIQGYFISRPAPASEI 693 >UniRef50_Q21SH7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q21SH7_RHOFD Length = 658 Score = 527 bits (1359), Expect = e-148, Method: Composition-based stats. Identities = 122/500 (24%), Positives = 217/500 (43%), Gaps = 20/500 (4%) Query: 255 MWGAMRYGYKLISLLWAVVLMIS-----IHSYQNYIPIYPGYTTQLTITSSSYLVFSFIV 309 + + R+ + +W + + + + + IYP + I + V +++ Sbjct: 153 LLRSGRHDSAFYAAMWDSINVSGHWQGEVWNRRKNSEIYPQLISIDVIRDHTGRVCNYVA 212 Query: 310 NYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRAL--------NRALRDAPWSALCYLRI 361 + ++ R+ + LA+ DP+ LPN L A RD AL L + Sbjct: 213 VLTDL--SKLRSSQLELDFLAHHDPLTRLPNRLLLLSRLQHGIELAQRDGTHLALLMLDL 270 Query: 362 PGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITAL 421 + + ++G ++ + Q ++ L + + V + G++ ++ + + E+ + Sbjct: 271 DRFKDINDSFGHLVGDELLQLVATRLVKQVRTIDTVGRFGGDEFSVLMEDVAGAEQAARV 330 Query: 422 DSHLKQFRFFWDGMP--MQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQ 479 + + + G+ ++ +IG S P N + L + L Sbjct: 331 ANDIIRVLSEPYGLSSGVEVRIGASVGISIYPDNGLTPELMLQQADSALYQAKIEGRGRF 390 Query: 480 RRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDE 537 + L + + ++ + RL++A+ + QP + V E L+R + + Sbjct: 391 AYFSESLTQAARARIDIEVRLRRAITQGELRVYYQPQVDIPSGRIVGAEALVRWQCPIEG 450 Query: 538 LISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRA-KMPAHRFAINLSPTSVCQARFP 596 L+ P F+ +A GL ID WV+ T Q RA +P A+NLS Q Sbjct: 451 LVPPARFITIAEATGLIGEIDDWVLRETCQQGQRWRAAGLPTLTLAVNLSAYQFLQGDIS 510 Query: 597 VEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYA 656 V+Q+L A L E+TES + QA L L+ LG ++AIDDFGTGY+S A Sbjct: 511 QTVAQVLRDTGYPAAFLELELTESALMQREAQAIQMLDRLKALGVRLAIDDFGTGYSSLA 570 Query: 657 RLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLS 716 LK D+LKID FI +I ++ D +IV +I +A ++ V+AE VEN+E + + Sbjct: 571 YLKLFPLDVLKIDKRFIDDIPAHRDDMEIVTAIIAMAHSLRLKVLAEGVENKEQLAYLQT 630 Query: 717 LGIDYMQGYLIGKPQPLIDT 736 G D QGYL +P P + Sbjct: 631 QGCDQFQGYLTSRPVPAAEF 650 >UniRef50_B6AQA1 Diguanylate cyclase/phosphodiesterase n=2 Tax=Leptospirillum sp. Group II RepID=B6AQA1_9BACT Length = 702 Score = 527 bits (1359), Expect = e-148, Method: Composition-based stats. Identities = 126/700 (18%), Positives = 251/700 (35%), Gaps = 62/700 (8%) Query: 87 SLTANFIIIIILCWGGYRVFTPRRNNVSHGDTRLISQRIFWQIVFPATLFLILFQFAAFV 146 ++ + I + + + S + R+ W A V Sbjct: 11 LVSLSVFIAVTAAYTSFSF-------ASRITSTSGKIRLLWLGG---------GSVAMGV 54 Query: 147 GLLASRENLVGVMPFNLGTLI--NYQALLVGNLIGVPLCYFIIRVVRNPF---------- 194 G+ + +G++ F + + + + L+ L+ + + F +R+ P Sbjct: 55 GIWSMH--FIGMLAFRMPFPVHYDVRTTLLSLLMAIVVSGFALRMTSLPRIGPANLLMAG 112 Query: 195 -----------YLRSYYSQLKQQVDAKVTKKEFALWLLALGALLLLLCMPLNEKSTIFST 243 Y ++ + ++ + + L + + Sbjct: 113 TLMGLGIGAMHYTGMMAMEMPMAIRYDPFLVFLSILIAVSASTAALRIVSTLRSDVAVAD 172 Query: 244 ---NYTLSLLLPLMMWGAMRYGYKLISLLWAVVLMISIHSYQNYIPIYPGYTT--QLTIT 298 + +L++ + G G + +S ++ + G + L I Sbjct: 173 MPKKFLSALIMGAAISGMHYTGMAAARFPLRMSGTPLKNSSDAWLAVTIGLASFMILAIG 232 Query: 299 SSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRDAPWSA--- 355 LV S + A L +A ++ LA D + LPN L + A A Sbjct: 233 LILSLVDSHLATRTAGLVGSLKAANEKLHYLALHDGLTRLPNRTLLEDRVDQAIRHARGV 292 Query: 356 -----LCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLN 410 + +L + + + + G + Q+++ LS + P + V ++ G++ + Sbjct: 293 DGAFSVFFLDVDRFKPINDSLGHSTGDKVLQQMARRLSGTVGPEDTVARIGGDEFVIVFP 352 Query: 411 TESHQERITALDSHLKQF---RFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAE 467 + ++ + ++ DG + + LL ++ Sbjct: 353 EQKDPGKVHEIARKIRDCVAENMEVDGQSLSVTTSIGISLFPHDGTTFRTLLASADSA-- 410 Query: 468 LSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDV--YH 525 + + + + L ++ M N L++ +E F L QP + Sbjct: 411 MYYAKSKGSGQIQFYSGELNDSAALRIEMENDLRRGIEKEEFVLYYQPKVTLATGEVESV 470 Query: 526 EILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMA-ENRAKMPAHRFAIN 584 E L+R ++ P F+P A E GL + W+++ + +A R A+N Sbjct: 471 EALVRWNHPEKGILPPHYFIPRAEETGLIIPLGRWIMDRACREAVIWQQAGFSRLRVAVN 530 Query: 585 LSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIA 644 LS E+ L + L E+TES + + + A TL +++ G +A Sbjct: 531 LSALQFINQDLMKEILDALESSGLPPECLELEITESLLMEDPEGAMRTLSGIRQKGVHVA 590 Query: 645 IDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEY 704 IDDFGTGY+S++ LK D LKID SFI +I N D IV +I L + V+AE Sbjct: 591 IDDFGTGYSSFSYLKKFPLDRLKIDRSFITDICDNPNDAAIVRTIITLGHNLNLKVIAEG 650 Query: 705 VENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIR 744 VE++ E + ++ D QG+ +P P + ++ +R Sbjct: 651 VESQAQLEMLKAMECDAYQGFFNSRPLPPGELAERLKEMR 690 >UniRef50_A1SY75 Diguanylate cyclase/phosphodiesterase n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SY75_PSYIN Length = 591 Score = 527 bits (1358), Expect = e-148, Method: Composition-based stats. Identities = 114/449 (25%), Positives = 196/449 (43%), Gaps = 22/449 (4%) Query: 308 IVNYMAVLATRQRA-VVRRIQRLAYVDPVVHLPNVRALNRAL--------RDAPWSALCY 358 IVN ++++A + + LA+ D + LPN R L L R SA+ + Sbjct: 135 IVNQDLTFQSKEKAKLAEELNDLAFYDTLTGLPNRRLLIDRLHHALASNVRQGCESAVMF 194 Query: 359 LRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNT------E 412 + + + + G + + + L L G+ V +L G++ L L E Sbjct: 195 IDLDHFKDINDTLGHEVGDLLLIQTAQRLESCLRKGDTVARLGGDEFMLILENLDENPIE 254 Query: 413 SHQERITALDSHLKQF--RFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSI 470 + + D L + + D + + + N L+ + + + Sbjct: 255 AATKAKAIADKILAELNKPYQLDMHKCHSTVSIGAVFFDHQGNTAEDLIKQADIA--MYQ 312 Query: 471 VTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDV-YHEILL 529 A N+ R +Q + ++ + N L+ A+E + F L Q V E L+ Sbjct: 313 AKQAGGNLIRFFNPKMQESINARITLENELRIAIEKSQFHLYYQIQMDSDNRVLGAEALI 372 Query: 530 RMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENR--AKMPAHRFAINLSP 587 R L+ P +F+P+A E GL SI WVIE + + ++ A+N+S Sbjct: 373 RWTNPEHGLVLPATFIPIAEETGLILSIGKWVIETACAQIKVWQKKSQTRDLTLAVNVSA 432 Query: 588 TSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDD 647 Q F +V + ++ I L E+TES + + ++ L ++G Q ++DD Sbjct: 433 KQFRQKDFVDQVQSAVQRHAIPGNLLKLELTESLLQYDTEVTIAMMKALNKIGVQFSLDD 492 Query: 648 FGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVEN 707 FGTGY+S LK + D KID SF+R+I +++ D IV +I +A++ + V+AE VE Sbjct: 493 FGTGYSSLQYLKRLPLDQFKIDQSFVRDIATDNNDKAIVKAIIAMAQILDIDVIAEGVET 552 Query: 708 EEIREAVLSLGIDYMQGYLIGKPQPLIDT 736 EE ++ +L G QGYL KP P+ Sbjct: 553 EEQQQLLLGKGCTLYQGYLFSKPIPIDQF 581 >UniRef50_B2JCW5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=7 Tax=Bacteria RepID=B2JCW5_BURP8 Length = 1040 Score = 527 bits (1358), Expect = e-148, Method: Composition-based stats. Identities = 109/483 (22%), Positives = 192/483 (39%), Gaps = 18/483 (3%) Query: 278 IHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVH 337 + +Y+ ++ + + I V A + +++ A D + Sbjct: 554 LRNYRKDGALFWNQLYIAPVPDADGQTTHHIAVINDVTALIR--YQEQLEYQANYDSLTR 611 Query: 338 LPNVRALNRAL--------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSP 389 LPN L L R A+ ++ + G + + + G + + ++ L+ Sbjct: 612 LPNRNLLRDRLQHALIVAQRHHKGVAVVFIDLDGFKNVNDSLGHSVGDRLLSVVADRLAR 671 Query: 390 LLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLK---QFRFFWDGMPMQPQIGVSYC 446 + V + G++ + + ++ + A ++ + DG + + Sbjct: 672 CARASDTVARHGGDEFVIVMTDTVDEQSLIAWMERVRASISEPVWLDGTELYVGCSMGAS 731 Query: 447 YVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEH 506 + L+ + + + + N + + ++ + RL++AL Sbjct: 732 LFPQDGDDAETLMKKADLA--MYRAKDMGRNTFQFYQPEMNVSAGARLNLERRLRRALRD 789 Query: 507 NHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEH 564 N F L QP + V E L+R LI P F+PVA E GL + WV+ Sbjct: 790 NEFLLHYQPQVDIETGQVVGMEALVRWHDPEVGLIPPSQFIPVAEESGLIGPLSEWVLRE 849 Query: 565 TLQF-MAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNAL 623 + A +P R ++NLS Q V Q+L + ++ L E+TES + Sbjct: 850 ACRQNKAWQDEGLPPARVSVNLSARQFQQRDIAKLVMQVLEETGLDPQYLELELTESTIM 909 Query: 624 TNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDY 683 N ++A L L LG +AIDDFGTGY+S + LK D LKID SF+ +I +S D Sbjct: 910 RNAEEAVSMLNELHALGIGLAIDDFGTGYSSLSYLKRFPVDRLKIDRSFVSDIGESSDDE 969 Query: 684 QIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPI 743 I ++I LA + V+AE VE + + D MQGY KP P ++ Sbjct: 970 TITSAIIALAHSLNLQVIAEGVETSTQLDFLKERACDEMQGYFFAKPLPHHAIPGMLQRG 1029 Query: 744 RES 746 +S Sbjct: 1030 SQS 1032 >UniRef50_Q3J9L4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Nitrosococcus oceani RepID=Q3J9L4_NITOC Length = 811 Score = 527 bits (1357), Expect = e-148, Method: Composition-based stats. Identities = 125/482 (25%), Positives = 226/482 (46%), Gaps = 22/482 (4%) Query: 271 AVVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLA 330 A+ + Y + I+S + V ++ + V T R + R+I A Sbjct: 330 AIEIANHSVVISRNGQEYAIQDSAAPISSRTGEVLGVVLVFSDV--TEARHMTRQITHQA 387 Query: 331 YVDPVVHLPNVRALNRALR--------DAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQK 382 D + L N R L ++ ALCY + +++ G + + ++ Sbjct: 388 THDSLTGLVNRREFEHRLERVLATLKAESAEYALCYFDLDRFKVINDTCGHVAGDELLRQ 447 Query: 383 LSHWLSPLLEPGEDVYQLSGNDLALRLNTES---HQERITALDSHLKQFRFFWDGMPMQP 439 +S L + + + +L G++ + L S Q TA+ ++ F+F W+G + Sbjct: 448 VSEVLRGQIRKRDTLARLGGDEFGVLLEHCSLKQAQRVATAIHKAIEDFQFTWEGKSFRI 507 Query: 440 QIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDK--VAMM 497 + + + I ++L +T + N N + + V M Sbjct: 508 GVSIGLVPITKASMGIAVVLKAADTACYAA--KNKGRNRIHVYHETDKELASHRGEVQWM 565 Query: 498 NRLQQALEHNHFFLMAQPITGM---RGDVYHEILLRMKGENDELISPDSFLPVAHEFGLS 554 R+ +AL+ N+F + QPI + + + +E+ LR++ ++ P +FLP A + L+ Sbjct: 566 TRIHRALKENYFQVYFQPIIPLATEKEEKCYEVFLRLEDGAGGVVLPGAFLPTAERYNLA 625 Query: 555 SSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLI 614 ID W+I +T ++A+N P INLS S+ F + + L K I + Q+ Sbjct: 626 VKIDRWMIANTFTWLAQNPE--PLRTCFINLSGHSLRNKTFLAFIIEQLEKTPIPSIQIC 683 Query: 615 FEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIR 674 FE+TE+ A N+ ++ L+ GC+ ++DDFG+ +S+A LKN+ D LKIDG F++ Sbjct: 684 FEITEAAATANLSCTIRFIKSLKSHGCKFSLDDFGSSLSSFAYLKNLPVDFLKIDGLFVK 743 Query: 675 NIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLI 734 +I+ + +D IV SI + ++ K +AE+VE EE+ E + +G++Y QGY I PQPL Sbjct: 744 DILDDPIDLAIVRSINEIGQIMKKQTIAEWVEKEEVLEKLREIGVNYAQGYWINPPQPLT 803 Query: 735 DT 736 + Sbjct: 804 EM 805 >UniRef50_Q7NZ89 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NZ89_CHRVO Length = 936 Score = 527 bits (1357), Expect = e-148, Method: Composition-based stats. Identities = 126/511 (24%), Positives = 220/511 (43%), Gaps = 35/511 (6%) Query: 255 MWGAMRYGYKLISLLWAVVLMIS-----IHSYQNYIPIYPGYTTQLTITSSSYLVFSFIV 309 + + R+ +W + + + + +YP + + +S + ++ Sbjct: 427 ILSSGRHDEPFYEQMWQSIAEHGSWQGELWNRRKNGEVYPEWLAINAVRNSLGEITHYVA 486 Query: 310 NYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRDAPWSALCYLRIPG------ 363 + + T ++A RIQ LA+ D + LPN + + A +A+ Sbjct: 487 IFSDL--TERKAADERIQFLAHFDVLTSLPNRIHMQDRVELAIHNAVR----DNQRLALL 540 Query: 364 ------MEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQER 417 + + ++ G Q + + ++ PGE + + G++ + L S Sbjct: 541 LLDLDRFKTVNESLGHSAGDTLLQVAADRIKSVMAPGEMLARQGGDEFIILLPVISDPGE 600 Query: 418 ITALDSHLK-----QFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVT 472 ++ + + P IG+S Y ++ L+ N A + Sbjct: 601 AALAAERVRDVFANPIELHNHVLTITPSIGIS-VYPDDGRDYETLVR---NADAAMYHAK 656 Query: 473 NAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLR 530 ++ N + L ++ +A+ ++L+ ALE + F L QP M V E L+R Sbjct: 657 SSGRNSYKFYTADLNARAREILAIESQLRFALERDEFVLHYQPQVEMESGRIVGAEALIR 716 Query: 531 MKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENR-AKMPAHRFAINLSPTS 589 + L+ P F+ VA E G I WVI + + E R A +P AINLS Sbjct: 717 WNHPSLGLLGPVRFIQVAEERGFIVQIGNWVIAEATRQLVEWRRAGLPELTLAINLSALQ 776 Query: 590 VCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFG 649 Q ++V Q L + L EVTES + + + T+ +++ +G +++IDDFG Sbjct: 777 FRQPDLALQVKQALESSGLPGHALDIEVTESIIMEDAQATIQTIDNMKNMGLRLSIDDFG 836 Query: 650 TGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEE 709 TGY+S + LK AD LKID SF+R+I ++ D I +I ++A+ M VVAE VE E Sbjct: 837 TGYSSLSYLKRFKADKLKIDRSFVRDIPQDADDSAIARAIINMAKNLNMQVVAEGVETME 896 Query: 710 IREAVLSLGIDYMQGYLIGKPQPLIDTLNEI 740 + + G D++QGYLI KP P D + Sbjct: 897 QWQFLEQEGCDFVQGYLIAKPLPADDFAELL 927 >UniRef50_A0YLL7 Putative uncharacterized protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YLL7_9CYAN Length = 872 Score = 527 bits (1357), Expect = e-148, Method: Composition-based stats. Identities = 119/445 (26%), Positives = 194/445 (43%), Gaps = 19/445 (4%) Query: 311 YMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL--------RDAPWSALCYLRIP 362 YMA+ Q+ V I+ A D + HLPN + L + + +L + Sbjct: 419 YMAIA---QKRVESIIRYQACHDALTHLPNRLLFDEQLALALANSKQQPELLGVAFLDLD 475 Query: 363 GMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALD 422 +++ G + Q Q+++ L L + + + G++ L + + IT + Sbjct: 476 RFKVVNDTLGHGIGDQLLQQVATRLKQCLRNCDTIARWGGDEFTLLFPHLTSTDEITKIA 535 Query: 423 SHLKQ---FRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQ 479 + F D + + LL + A + N Sbjct: 536 HRILDKLSIPFVIDNQELYVTASLGIALCPYDAEDAQTLLKHAD--AAMYRAKKQGRNNF 593 Query: 480 RRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDE 537 + A + RE +++ + L++AL F L QP + V E L+R + Sbjct: 594 QVFAEEMHREALNQLTLEADLRRALIKEEFLLYYQPQVEISTGKIVGLEALIRWQHPTLG 653 Query: 538 LISPDSFLPVAHEFGLSSSIDMWVIEHTL-QFMAENRAKMPAHRFAINLSPTSVCQARFP 596 + PD F+P+A E GL + I WV++ Q + +P R A+NLS Q++ Sbjct: 654 FVPPDQFIPLAEEIGLIAPIGQWVLQTACIQHQSWQAEGLPPVRIAVNLSARQFHQSQLI 713 Query: 597 VEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYA 656 + Q L +I+ L E+TES A+ +V+ TLQ L+E+G I IDDFGTGY+S Sbjct: 714 NIILQTLETTEIDPQYLELEITESAAMQDVEFTIQTLQELREMGLHITIDDFGTGYSSLN 773 Query: 657 RLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLS 716 LK+ + LKID SF+++IV NS D I +I L++ K+ VVAE VE + + S Sbjct: 774 VLKHFPLNTLKIDRSFVQDIVENSRDAAIAQTIVALSQGLKLKVVAEGVETPQQLSFLRS 833 Query: 717 LGIDYMQGYLIGKPQPLIDTLNEIE 741 + D QGY P P I+ + Sbjct: 834 IHCDLAQGYYFCPPVPAIEIAKLLR 858 >UniRef50_B8KF61 Ggef/eal/pas/pac-domain containing protein n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KF61_9GAMM Length = 810 Score = 526 bits (1356), Expect = e-147, Method: Composition-based stats. Identities = 115/496 (23%), Positives = 203/496 (40%), Gaps = 26/496 (5%) Query: 255 MWGAMRYGYKLISLLW-----AVVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIV 309 + + R+ + +W I + + ++P T I F+ Sbjct: 303 LLRSGRHDAEFYKKMWHALKETGTWRGEIWNRRKSGAVFPELLTISKI---DGQNSGFVA 359 Query: 310 NYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRDA--------PWSALCYLRI 361 + + T+ + ++Q+LA+ DP+ LPN +N L+ + A+ +L I Sbjct: 360 IFTDI--TQLKETEEQLQKLAHYDPLTELPNRYLINERLQQSIRRAQRRSERLAVFFLDI 417 Query: 362 PGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITAL 421 + + + G + + ++ L LL + V ++ G++ + L + + T + Sbjct: 418 DSFKNINDSLGHLAGDKLLAMTANRLRELLRDDDTVGRIGGDEFLMLLEDINSPDVATNI 477 Query: 422 DSHL---KQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENM 478 + + +G + V L+ + A + N Sbjct: 478 AEKIIGALRKPTILEGRSVSVSASVGISIYPDDGQTAETLMSNAD--AAMYSAKEQGRNT 535 Query: 479 QRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGM--RGDVYHEILLRMKGEND 536 R + L R V + + L++A N F L QP + + E+LLR Sbjct: 536 FRFYSENLTRAAFQNVLIDSALREAKSRNEFRLAFQPQIDIVTNSLLGLEVLLRWHHPTL 595 Query: 537 ELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRA-KMPAHRFAINLSPTSVCQARF 595 +SP F+P A GL I WV+E + A +P R A+N+S F Sbjct: 596 GTVSPAQFIPQAERTGLIRDIGQWVLEQACLQGNKWLAEGLPFGRLAVNVSAPQFRAEDF 655 Query: 596 PVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASY 655 +V Q+L +L E+TES + + +Q + L+ +G Q AIDDFGTGY+S Sbjct: 656 VDQVRQVLEYANFPPNRLELELTESVLVQDTEQLIGNMDELRAMGIQFAIDDFGTGYSSL 715 Query: 656 ARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVL 715 + LK + D LK+D SF+ NI ++ D I ++ L + + V+AE +E EE A+ Sbjct: 716 SYLKKMPIDRLKLDKSFVDNISTDDNDRIIAEAVVALGQAMGLEVIAEGIEYEEQARALR 775 Query: 716 SLGIDYMQGYLIGKPQ 731 +G QG+L G P Sbjct: 776 DIGCTQFQGFLYGMPM 791 >UniRef50_Q88M14 Sensory box protein/GGDEF family protein n=23 Tax=Proteobacteria RepID=Q88M14_PSEPK Length = 973 Score = 526 bits (1356), Expect = e-147, Method: Composition-based stats. Identities = 136/527 (25%), Positives = 239/527 (45%), Gaps = 34/527 (6%) Query: 233 PLNEKSTIFSTNYT----LSLLLPLMMWGAMRYGYKLISLLWAVVLMISIHSYQNYIPIY 288 P E+ T + + LS L L+ A G L+ + + L + I Sbjct: 427 PAAEQLTHWQSGQAQGLPLSALFSLVDEHAEEDGRSLVEQVLSGSL-KGGSEHARLIQRL 485 Query: 289 PGYTTQLTITSSSYLVFSFIVNYMAVLA--TRQRAVVRRIQRLAYVDPVVHLPNVRALNR 346 G T + + S L + + VL T++R + + A D + L N R Sbjct: 486 DGSTVSINLVGSPILNDGQVSGIVLVLHDMTQERQYIANLSWQATHDALTGLANRREFEY 545 Query: 347 AL--------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVY 398 L R A +L +L + +++ G + + + L L G+ + Sbjct: 546 RLEQALNDLARQAGRHSLMFLDLDQFKLVNDTCGHAAGDELLRHICAVLQSGLREGDTLA 605 Query: 399 QLSGNDLALRLNTESHQERI---TALDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHI 455 +L G++ + L + L ++ F W G P + + ++ + Sbjct: 606 RLGGDEFGVLLENCPPDQAERIGEQLRQMVQSLHFVWKGRPFVTTVSIGLVHMAQAPGTL 665 Query: 456 YLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELK-----DKVAMMNRLQQALEHNHFF 510 L A+++ A E + R +Y + + ++A + RL ALE N F Sbjct: 666 EASL----RAADMACYM-AKEKGRNRVQVYHADDSELSMRFGEMAWIQRLHVALEENRFC 720 Query: 511 LMAQPITGMR---GDVYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQ 567 L AQ I ++ G + EILLR+ E+ I P SF+P A +GL +++D WV+ + Sbjct: 721 LYAQEIAPLKTFEGPGHIEILLRLHDESGRTILPSSFIPAAERYGLMTALDRWVVRNVFM 780 Query: 568 FMA---ENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALT 624 + E + P AINLS +S+ +F + +L +Y I + FE+TE++A+ Sbjct: 781 VIRKCLEEGREGPLSTCAINLSGSSIGDDKFLEYLQRLFVEYAIPPRMICFEITETSAIA 840 Query: 625 NVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQ 684 N+ A + L+ LGC+ ++DDF G +S+A LK++ D LKIDGSF+++++ + ++ Sbjct: 841 NLGSAIRFINELKGLGCRFSLDDFCAGMSSFAYLKHLPVDYLKIDGSFVKDMLDDPVNRA 900 Query: 685 IVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQ 731 +V I H+ + +AE+VE I +A+ +G+DY QGYLI +PQ Sbjct: 901 MVEVINHIGHVMGKRTIAEFVETPLIEQALQEIGVDYAQGYLIERPQ 947 >UniRef50_C5S8G6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S8G6_CHRVI Length = 861 Score = 526 bits (1356), Expect = e-147, Method: Composition-based stats. Identities = 120/506 (23%), Positives = 215/506 (42%), Gaps = 18/506 (3%) Query: 248 SLLLPLMMWGAMRYGYKLISLLWAVVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSF 307 LL + A Y L I + + +YP + S V + Sbjct: 217 PTLLKSGLQDAAFYRALWRDLNETGRWHGEIWNRKKSGELYPEILHINAVQDPSGRVTHY 276 Query: 308 IVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNV--------RALNRALRDAPWSALCYL 359 I ++ + T + R++ LA+ D + LPN +AL+ A R +A+C+L Sbjct: 277 IGMFIDI--TDLKNSQSRLENLAHYDVLTGLPNRLLLGYRLRQALDDAQRHERLAAVCFL 334 Query: 360 RIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERIT 419 + +++ ++G + + L L + V +L G++ + LN +QE + Sbjct: 335 DLDNFKLVNDHHGHETGDRLLIDIGRRLRDTLRSNDTVARLGGDEFVILLNDLRNQEELD 394 Query: 420 ALDSHLKQ---FRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPE 476 + L D + + + V + LL + + Sbjct: 395 NVLVRLLDGVAHPVRIDALQIVITVSVGVTIYPLDDHDPDTLLRHADQA--MYQAKQMGR 452 Query: 477 NMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGE 534 N + ++ + + R++QAL+H F L QP MR V E L+R + Sbjct: 453 NRYQLFDPEAANAMQSRHRELERIRQALQHGEFQLYYQPKVDMRLGQVVGMEALIRWRHP 512 Query: 535 NDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQAR 594 L+ P FLP+ L + WV+ L + + A+ ++N++ Q Sbjct: 513 ERGLVPPLQFLPLIEASPLIVEVGEWVLHEALGQIRQWCAEGRPLTISVNIAAHHFQQRD 572 Query: 595 FPVEVSQLLAKY-QIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYA 653 F + + +LA++ + L E+ ES AL +++ + + Q +G + A+DDFGTGY+ Sbjct: 573 FVLRLQTILAEHPEATPRLLELEILESAALEDIQSVRGIMTACQAMGVRFALDDFGTGYS 632 Query: 654 SYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREA 713 S + LK + A+ LKID SF+RN++ +S D I+ + LA++ + V+AE VE E Sbjct: 633 SLSYLKQLPAETLKIDQSFVRNMLEDSEDLAIIEGVIGLAKVFRKEVIAEGVETPEQGLL 692 Query: 714 VLSLGIDYMQGYLIGKPQPLIDTLNE 739 ++ G D+ QGY IG+P P Sbjct: 693 LMRFGCDHAQGYGIGRPMPAEQIPAW 718 >UniRef50_Q47FQ3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q47FQ3_DECAR Length = 1093 Score = 526 bits (1355), Expect = e-147, Method: Composition-based stats. Identities = 101/433 (23%), Positives = 192/433 (44%), Gaps = 20/433 (4%) Query: 318 RQRAVVRRIQRLAYVDPVVHLPNVRALNRAL--------RDAPWSALCYLRIPGMEMLVK 369 +R + +++ LA+ D + L N L + L +D A+ ++ + + + Sbjct: 655 ERRRIESKLRYLAHHDALTGLANRTLLQQRLGEAMDNAAQDDTKVAILFIDLDRFKTIND 714 Query: 370 NYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLK--- 426 + G + + ++ L+ L + + +L G++ + L ++++ L S + Sbjct: 715 SLGHHIGDTLLKNVASRLTETLRSNDTIARLGGDEFMIILPLKANEALAGKLASKILDAL 774 Query: 427 --QFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAM 484 R + + P IG+ C+ + + L+ +T + N Sbjct: 775 RPPIRIDGHELFVTPSIGI--CFYPNDGVTVNALMRNADTA--MYQAKANGRNTYCYFTA 830 Query: 485 YLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPD 542 + + + + L++A++ N F + QP+ ++ +E L+R + L+ P Sbjct: 831 EMNAAADNYFQIESDLRRAVDRNEFEVFYQPVIDLKTHRITSYEALVRWRHPTKGLVGPA 890 Query: 543 SFLPVAHEFGLSSSIDMWVIEHTLQFMAEN-RAKMPAHRFAINLSPTSVCQARFPVEVSQ 601 F+ VA E GL I V+ + + A+NLSP + + Sbjct: 891 QFITVAEESGLIGEIGTIVLRQACSQLRSWIDEGFTSPILALNLSPIQFNDPNLTEGICR 950 Query: 602 LLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNV 661 +L Y + ++ E+TE+ + + + A TLQ+L G +++IDDFGTGY+S A LK Sbjct: 951 ILRDYDLTPDRIELEITETVIMQDGELALGTLQNLSSRGFRLSIDDFGTGYSSLAYLKRF 1010 Query: 662 NADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDY 721 D LKID SFI ++ +N D IV +I LA + V+AE VE +E + + +L ++ Sbjct: 1011 PVDTLKIDRSFITDMTANENDRAIVTAIMALANSLHLSVIAEGVETKEQYDLLSALNCNF 1070 Query: 722 MQGYLIGKPQPLI 734 QGY + KP P Sbjct: 1071 AQGYYMAKPMPAE 1083 >UniRef50_Q3JBM4 Sensor protein n=4 Tax=Bacteria RepID=Q3JBM4_NITOC Length = 1499 Score = 526 bits (1355), Expect = e-147, Method: Composition-based stats. Identities = 103/436 (23%), Positives = 179/436 (41%), Gaps = 21/436 (4%) Query: 321 AVVRRIQRLAYVDPVVHLPNVRALNRALRD--------APWSALCYLRIPGMEMLVKNYG 372 + I +LAY D + LPN ++ L + A+ +L + +++ G Sbjct: 1045 RAEKDIHQLAYHDVLTSLPNRTLFHKQLGELMNRSHLRGEQFAVLFLDLDRFKLVNDTLG 1104 Query: 373 IMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHL-----KQ 427 + + + + L + V +L G++ + L + + + K Sbjct: 1105 HEVGDLLLKAAADRIVGCLRSNDMVARLGGDEFTVILEKIESPRVAAEVAAKICSVLSKV 1164 Query: 428 FRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQ 487 F F M + IG+S + L+ +T + N + ++ Sbjct: 1165 FAFSGQEMYISTSIGISL--YPGDGEDVSTLVKHADTAMFRAKEQG---NSYQFYEKGME 1219 Query: 488 RELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDVYH--EILLRMKGENDELISPDSFL 545 ++ + L++ALE N L QP + E L+R LI P F+ Sbjct: 1220 TAAVKRLGLEAELRRALEQNELALYYQPQINLGTGEIATLETLIRWHHPEHGLIPPSEFI 1279 Query: 546 PVAHEFGLSSSIDMWVIEHTLQFMAEN-RAKMPAHRFAINLSPTSVCQARFPVEVSQLLA 604 P+A E GL +SI W++ M + A+N+S + + ++ +L Sbjct: 1280 PLAEETGLIASIGAWILREACTQMQSWLQRGFGPFHIAVNVSGRELEREDLVDKIVTILK 1339 Query: 605 KYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNAD 664 + + L E+TES + A + L+E+G + AIDDFGTGY+S LK+ D Sbjct: 1340 ETGLPPKWLELEITESVVMKGAGAAIPKFRRLREMGIKFAIDDFGTGYSSLNYLKSFPVD 1399 Query: 665 LLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQG 724 +LKID FI ++VSN D I+ I LA ++ VVAE VE + E + + D QG Sbjct: 1400 ILKIDRCFIHDVVSNPDDAAIIKGIIALAHSLRLKVVAEGVETQAQEEFLKAHQCDRFQG 1459 Query: 725 YLIGKPQPLIDTLNEI 740 + + +P + I Sbjct: 1460 FYLSEPLSAAEIEQAI 1475 >UniRef50_A1STH5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Psychromonas ingrahamii 37 RepID=A1STH5_PSYIN Length = 962 Score = 526 bits (1355), Expect = e-147, Method: Composition-based stats. Identities = 109/503 (21%), Positives = 196/503 (38%), Gaps = 26/503 (5%) Query: 254 MMWGAMRYGYKLISLLWAVVLMISIHSYQ-----NYIPIYPGYTTQLTITSSSYLVFSFI 308 + + + +WA + I + IY T + + + +++ Sbjct: 442 RILKSGKTPQTTFKEMWAHLTRGDIWHGEIINRRKDKSIYIESATITPVKQADGKITNYV 501 Query: 309 VNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVR--------ALNRALRDAPWSALCYLR 360 + T ++ + LAY D + LPN R LN A + + +L Sbjct: 502 AIKEDI--TEKKKAEAYTENLAYFDQLTGLPNRRMLQAQVKYRLNMAQSNHQPLTVMFLD 559 Query: 361 IPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITA 420 + + + + G + Q K++ + + + V +L G++ + + Sbjct: 560 LDNFKNINDSLGHTVGDQVLIKIAKRIKKAIREVDTVSRLGGDEFIMLFPNTDANAAMHI 619 Query: 421 LDSHLKQFR----FFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPE 476 + +++ + + + P IG++ + N LL T + V N Sbjct: 620 ATTLIQEISKASVVEHNELTITPSIGIAI--YPNDGNDFKTLLKNAETA--MYRVKNDSR 675 Query: 477 NMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGE 534 N +Q + + N L+ AL+ N L QP + E LLR Sbjct: 676 NGFHFVTPEMQLSASRNLQLENALRHALKRNELQLYYQPQISTSNGQIIGAEALLRWHHP 735 Query: 535 NDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAEN-RAKMPAHRFAINLSPTSVCQA 593 +ISP F+P+A G I WV+ ++ A+NLS Q Sbjct: 736 ELGMISPAEFIPIAESSGQIIEIGEWVLRTAIRQTKNWMDDGFTPMIIAVNLSVVQFRQK 795 Query: 594 RFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYA 653 ++ +LA+ Q+ L E+TE+ + + + + E G +++IDDFGTGY+ Sbjct: 796 NLLTLITDILAEVQLPNEYLELELTEAVTMHDPESVINVMNTFHEQGIRMSIDDFGTGYS 855 Query: 654 SYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREA 713 S + LK LKID SFIR+I ++ D IV++I +A + +AE VE E Sbjct: 856 SLSYLKKFKVYKLKIDQSFIRDISNDPDDRAIVSAIIDMASNLGLQTIAEGVETAEQLAF 915 Query: 714 VLSLGIDYMQGYLIGKPQPLIDT 736 + G +QGY KP P ++ Sbjct: 916 LRLHGCHEVQGYYFSKPLPSVEF 938 >UniRef50_A6T1A8 Sensory box/GGDEF family protein n=1 Tax=Janthinobacterium sp. Marseille RepID=A6T1A8_JANMA Length = 910 Score = 526 bits (1355), Expect = e-147, Method: Composition-based stats. Identities = 113/490 (23%), Positives = 203/490 (41%), Gaps = 30/490 (6%) Query: 278 IHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVH 337 + +Y+ ++ + F+ + T + + RLA D + Sbjct: 426 LRNYRKNGSLFWNDLYIAPVKDDEGKTTHFVAAMSDI--TPMKQYETTLHRLASHDVLTG 483 Query: 338 LPNVRALNRALRDAPWSA--------LCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSP 389 LPN L L +A + + + + + + G + +S L Sbjct: 484 LPNRALLQDRLENAIAYSARNGHAVWVVLVDLDRFKFVNDTMGHQAGDVLLKIISDRLQA 543 Query: 390 LLEPGEDVYQLSGNDLALRLNTE-------SHQERITALDSHLKQFRFFWDGMPMQPQIG 442 + + V +L G++ L L S +++ +K + +G Sbjct: 544 SVRESDTVARLGGDEFVLVLPECGDGPSGYSSDVIQRIMEAVVKPLTIQGSEFFLSCSMG 603 Query: 443 VSYCYVRSPVNHIYLLLGELNTVAELSIVTNA--PENMQRRGAMYLQRELKDKVAMMNRL 500 ++ Y + LL A++++ + N + + + +++ + L Sbjct: 604 IA-VYPNDGADPTTLL-----AHADVAMYRSKELGRNNFQFYTPAMNDQALERLRIEGEL 657 Query: 501 QQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSID 558 + A+E N L QP + V E L+R ++ P SF+ +A E GL I Sbjct: 658 RHAIELNELVLHYQPQVDLHTGAIVGLEALVRWNHPILGMVQPGSFISLAEETGLIIPIG 717 Query: 559 MWVIEHTLQFMAENRA-KMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEV 617 WV++ + + R A+NLS QA + L + +EA L E+ Sbjct: 718 AWVLQTACRQAKAWQDMGFTQLRIAVNLSARQFTQASLLESIKDTLQETGLEARFLEIEL 777 Query: 618 TESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIV 677 TES+ + ++++ +TL+ L+ LG Q+++DDFGTG++S A LK D LKID SF+R+I Sbjct: 778 TESSVMADIERNILTLRDLKSLGVQLSVDDFGTGHSSLAYLKRFPIDTLKIDRSFVRDIA 837 Query: 678 SNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTL 737 N D IV+SI LA K+ V+AE VE + + + G + +QGY KP P Sbjct: 838 INQDDASIVSSIISLAHNLKLNVIAEGVETASQMDILRAQGCNEIQGYYFCKPLPSDQIE 897 Query: 738 NEIEPIRESA 747 + + ES+ Sbjct: 898 TLL--LNESS 905 >UniRef50_Q3SIU2 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SIU2_THIDA Length = 1012 Score = 526 bits (1355), Expect = e-147, Method: Composition-based stats. Identities = 122/497 (24%), Positives = 220/497 (44%), Gaps = 29/497 (5%) Query: 269 LWAVVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFS---FIVNYMAVLATRQRAVVRR 325 LW + +++ + + + G T + + S +Y V+ ++++ + + T ++ V + Sbjct: 521 LWEQIKVLNSMTIEGHYKTRSGRTFPVEV-SVNYFVYGGREYVLSLVRDV-TERKEVEAQ 578 Query: 326 IQRLAYVDPVVHLPNVRALNRAL--------RDAPWSALCYLRIPGMEMLVKNYGIMLRI 377 I+ LAY D + LPN R L L R + AL L + + L G + Sbjct: 579 IRSLAYFDSLTGLPNRRLLLDRLNQARLSSERTREYGALMILDLDRFKTLNDTQGHDVGD 638 Query: 378 QYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQE-----RITALDSHL-----KQ 427 + ++ L+ + + V +L G++ + L E + A+ + + Sbjct: 639 RLLIDVARRLTASVRQNDTVCRLGGDEFVVVLEGFGSDEDQAVTQAEAIAEKVRAALNQP 698 Query: 428 FRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQ 487 + +G V +LL + + L +A N+ R +Q Sbjct: 699 YSLSGNGSRFHSTTSVGLTLFCGHDATADMLLKQADVA--LYQAKDAGRNLVRFFNPAMQ 756 Query: 488 RELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDV-YHEILLRMKGENDELISPDSFLP 546 + ++AM L+QALE + F + QP R V E LLR + + +E ISP F+P Sbjct: 757 AAIDTRMAMEAALRQALERDEFHVYYQPQVDQRERVIGAEALLRWRPQGNEAISPLEFIP 816 Query: 547 VAHEFGLSSSIDMWVIEHTLQFMAENRA--KMPAHRFAINLSPTSVCQARFPVEVSQLLA 604 +A E GL I WV++ + + + + A+N+S + F V LA Sbjct: 817 LAEETGLILPIGKWVLDVACAQLKAWESDPRAAHLKIAVNVSARQFHEPDFVATVQDSLA 876 Query: 605 KYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNAD 664 + ++ +L E+TES L ++ ++ L LG +DDFGTGY+S + LK + D Sbjct: 877 RSGVDPTRLQLELTESVVLEKIETVVSRMEELNALGVSFCLDDFGTGYSSLSYLKRLPLD 936 Query: 665 LLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQG 724 +KID SF+R++V +S D IV +I ++R + V+AE VE R+ + QG Sbjct: 937 QVKIDQSFVRDVVDDSNDAAIVQAIMAMSRSLGLNVIAEGVETHAQRDFLAG-KCLGYQG 995 Query: 725 YLIGKPQPLIDTLNEIE 741 +L +P P+ ++ Sbjct: 996 FLFCEPIPIEQWERVLK 1012 >UniRef50_A1WEV3 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WEV3_VEREI Length = 981 Score = 525 bits (1354), Expect = e-147, Method: Composition-based stats. Identities = 112/481 (23%), Positives = 197/481 (40%), Gaps = 19/481 (3%) Query: 279 HSYQNYIPIYPGYTTQLTITS--SSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVV 336 + YP + + ++ ++ + I + + + QR RIQRLA+ DP+ Sbjct: 505 WGRRKDGSGYPQWLSVSSVRDGDANGPITHSITLFRDI--SLQREAQERIQRLAHFDPLT 562 Query: 337 HLPNVRALNRALRD--------APWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLS 388 LPN L + AL +L + + + + G + ++ L Sbjct: 563 DLPNRVLLAERTQRQIAQEQARGGQLALLFLDLDHFKNVNDSLGHRIGDILLVAVARRLQ 622 Query: 389 PLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLKQF--RFFWDGMPMQPQIGVSYC 446 L+ P + V +L G++ L L S + L F D + + V Sbjct: 623 SLIGPQDTVSRLGGDEFLLLLPATSAAHAAKVASALLTAVAQPFQIDPYELSTTLSVGIA 682 Query: 447 YVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEH 506 + L + A + + N LQ + + N L++ALE Sbjct: 683 MCPADGESFDTLYQRAD--AAMYSAKQSGRNRYGFFTADLQARTARALQIENALRRALER 740 Query: 507 NHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEH 564 F L QP + V E LLR +++P F+PVA G ++ WV+ Sbjct: 741 QQFELHYQPQVSLGTGQVVGAEALLRWHHPELGVVAPAEFIPVAENSGQIVALGEWVLHT 800 Query: 565 TLQFMAENRA-KMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNAL 623 + ++P ++NLS + P V++ L + + A +L E+TE A+ Sbjct: 801 AARDAKRWLDMQLPLRAVSVNLSAVQFRHPQLPEMVTRCLQQAGLPARRLELELTEGAAV 860 Query: 624 TNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDY 683 + A + L + G ++++DDFGTGY+S + LK LKID SF+R++ ++ D Sbjct: 861 DDPVAALAMMDQLHDRGVRLSMDDFGTGYSSLSCLKRFQIYKLKIDQSFVRDLDDDANDR 920 Query: 684 QIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPI 743 IV++I +A+ M AE VE + + + + G D QGYL +P P + + Sbjct: 921 AIVSAIIRMAQALGMQTTAEGVETDGQLQFLRAQGCDEGQGYLFSRPLPADAFEAYLRAM 980 Query: 744 R 744 + Sbjct: 981 K 981 >UniRef50_C5V567 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V567_9PROT Length = 927 Score = 525 bits (1354), Expect = e-147, Method: Composition-based stats. Identities = 118/469 (25%), Positives = 207/469 (44%), Gaps = 24/469 (5%) Query: 290 GYTTQLTITSSSYLVFSFIVNYMAV-LATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL 348 G + + SS V S + + V T +R + ++ LA+ D + LPN R L L Sbjct: 449 GEVRLVEVHSSPVEVDSRPLLFFIVHDITERRHLEEKMHDLAFYDLLTKLPNRRLLLDRL 508 Query: 349 --------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQL 400 R SAL +L + ++L +G + Q ++++ + + + + Sbjct: 509 EKALLSGTRSRHHSALMFLDLDHFKVLNDLHGHDIGDQLLVEVANRILGCIREQDSAARF 568 Query: 401 SGNDLALRLNTESH--QERITALDSHLKQFRFFW----------DGMPMQPQIGVSYCYV 448 G++ + + S + + DS ++ R + + + Sbjct: 569 GGDEFVVMIEDLSENLSDAVNQADSVAEKIRCALAAPYLLKRGEEVISHHCSSSIGVTLF 628 Query: 449 RSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNH 508 R ++ LL T + +A N+ R +Q ++++ A+ N L ALE Sbjct: 629 RDHEENLEQLLKW--TDMAMYHAKDAGRNVIRFFDPVMQTAIENRAALENDLHTALEERQ 686 Query: 509 FFLMAQPITGMRGDV-YHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQ 567 F L Q G E+LLR + L+SP F+P+A + GL I WV++ Sbjct: 687 FELFYQIQVDRDGRAEGAEVLLRWRHPQRGLVSPAQFIPLAEDTGLIVPIGEWVLDTVCA 746 Query: 568 FMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVK 627 +A+ + + A+N+S Q+ F V Q++ ++Q+ L E+TES L N++ Sbjct: 747 QIAKWQGEQRNLVIAVNVSAKQFRQSNFVELVQQIIQRHQVSPALLKLELTESLVLDNIQ 806 Query: 628 QAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVA 687 ++ L+ G ++DDFGTGY+S + LK + D +KID SF+R+I ++ D +V Sbjct: 807 DTIDKMKVLKAFGVSFSMDDFGTGYSSLSYLKQLPLDQIKIDQSFVRDIATDKTDLVMVK 866 Query: 688 SICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDT 736 +I L +M V+AE VE+E + G QGYL KP P+ Sbjct: 867 TIVDLGVNFEMDVIAEGVESEVQLGLLKQCGCSRFQGYLFSKPVPVEAF 915 >UniRef50_C7RQ11 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RQ11_9PROT Length = 978 Score = 525 bits (1354), Expect = e-147, Method: Composition-based stats. Identities = 117/503 (23%), Positives = 192/503 (38%), Gaps = 24/503 (4%) Query: 254 MMWGAMRYGYKLISLLWAVVLMIS-----IHSYQNYIPIYPGYTTQLTITSSSYLVFSFI 308 + + R+ +WA + + + + IYP + T + ++ Sbjct: 327 RLLQSGRHDRAFYQAMWASLTQAGHWQGELWNRRADGEIYPQWATLSVVKDEHGQPTHYL 386 Query: 309 VNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNV--------RALNRALRDAPWSALCYLR 360 + + + R ++ LA+ DP+ LPN AL RA R SA+ + Sbjct: 387 AVFTDLSKLKHR--EEELEHLAHYDPLTDLPNRLLLRSLLQHALERAQRQGGKSAVLVIN 444 Query: 361 IPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITA 420 + + + + G L + ++ L L + V +L ++ L E + Sbjct: 445 LDQFKNVNDSLGHALGDELLLGVTARLKARLRHEDVVGRLGADEFVAILEASQDAENAGS 504 Query: 421 LD----SHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPE 476 + + L DG + + LL + + Sbjct: 505 IAGDLLAALAPPFVLADGHETYARASIGISVFPQDGKGANDLLRSADVA--MHRAKQRGG 562 Query: 477 NMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDV--YHEILLRMKGE 534 N L ++ M L++AL L QP + V E LLR + Sbjct: 563 NQYAFYTGELGHGALQRLEMETALRRALIQGELVLHYQPKLDLASGVIVGGEALLRWQRP 622 Query: 535 NDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAEN-RAKMPAHRFAINLSPTSVCQA 593 L+ P F+P+A E GL I WVI T + + A P+ A+N+S Sbjct: 623 GFGLVPPYRFIPLAEETGLIVPIGAWVINETCRQIRAWAEAGQPSVMVAVNVSARQFAGG 682 Query: 594 RFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYA 653 ++ L K+ ++ L E+TES + +QA L L+ +G +A+DDFGTGY+ Sbjct: 683 ELEAVLATALRKHAVDPRMLGLELTESMLMAAPEQATERLDALRRVGVAVALDDFGTGYS 742 Query: 654 SYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREA 713 S + L D LKID SFI +IVS+ I ++ LA + VVAE VE E Sbjct: 743 SLSYLSRFPVDELKIDRSFITHIVSDPKAANIATAVIALAHRMALKVVAEGVETETQLSY 802 Query: 714 VLSLGIDYMQGYLIGKPQPLIDT 736 + D +QGYL P P + Sbjct: 803 LRKNRCDQIQGYLFSAPVPADEF 825 >UniRef50_B4AX01 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4AX01_9CHRO Length = 1409 Score = 525 bits (1354), Expect = e-147, Method: Composition-based stats. Identities = 104/451 (23%), Positives = 191/451 (42%), Gaps = 23/451 (5%) Query: 312 MAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRDAPW---------SALCYLRIP 362 MA+ T ++ +++ D + LPN L + A A+ ++ + Sbjct: 963 MAIDITERKQAEEQLRHSVLHDGLTGLPNRTLLLDRVEQAIKRKQQQPNYLFAILFIDLD 1022 Query: 363 GMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALD 422 +++ + G ++ Q + ++ L + P + V + G++ + L + T + Sbjct: 1023 RFKVVNDSLGHLVGDQLLKTIADKLQRCVRPTDTVARFGGDEFVILLEDLTIWTDATKMA 1082 Query: 423 SHLKQF---RFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIV--TNAPEN 477 + + F + + SP EL A++++ A Sbjct: 1083 QRITEEFESSFTLQEQEYFTSASIGITFCSSP----EQTPSELVRNADIAMYRSKEAGRA 1138 Query: 478 MQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGM--RGDVYHEILLRMKGEN 535 + + + + L+ ALE F + QPI + R + E L+R Sbjct: 1139 RYTMFDPIMHTQATQLLELETNLRLALEREEFIVYYQPIVSLMNRNLLGFEALVRWIHPE 1198 Query: 536 DELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKM---PAHRFAINLSPTSVCQ 592 +ISP +F+PVA E GL + WV+ + + M + + R ++NLS + Q Sbjct: 1199 KGVISPANFIPVAEETGLIIPLGEWVLRESCRQMKAWQEQFIGAENLRVSVNLSGKQLQQ 1258 Query: 593 ARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGY 652 + +L + +E L E+TES + N +Q L ++ Q++IDDFGTGY Sbjct: 1259 PNLINRIDNILTETGLEGKNLKLEITESMLMNNKEQVSELLLQMKAKKIQVSIDDFGTGY 1318 Query: 653 ASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIRE 712 +S + L + D LKID SF+ + +++IV +I LA +M VVAE VE E+ Sbjct: 1319 SSLSYLHYLPVDTLKIDRSFVSRMSQVGENFEIVEAIITLAHHLQMDVVAEGVETEQHLR 1378 Query: 713 AVLSLGIDYMQGYLIGKPQPLIDTLNEIEPI 743 + LG ++ QGY KP ++ +E + Sbjct: 1379 QLQQLGCEFGQGYFFSKPLESEKIVSWLERL 1409 >UniRef50_B4B341 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B341_9CHRO Length = 1342 Score = 525 bits (1353), Expect = e-147, Method: Composition-based stats. Identities = 112/506 (22%), Positives = 209/506 (41%), Gaps = 30/506 (5%) Query: 255 MWGAMRYGYKLISLLWAVVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAV 314 +W + G + H+ + ++ + I ++ ++ F+ + Sbjct: 841 IWKTITSGQEWHGEF---------HNKKKNGELFWEAASISPIKNAEGIITHFVAVKEDI 891 Query: 315 LATRQRAVVRRIQRLAYVDPVVHLPNV--------RALNRALRDAPWSALCYLRIPGMEM 366 T ++A + A D + LPN +A+ +A R A+ ++ + + Sbjct: 892 --TERKAQQTTLTYQANYDALTGLPNRFLAIDRLKQAILQADRQKKRVAVMFIDLDHFKD 949 Query: 367 LVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHL- 425 + G QK+S L L + V +L G++ + L + S + Sbjct: 950 VNDTLGHEYGDLLLQKVSQRLKQCLRKSDTVARLGGDEFLIILPNLRETHHCKLIASKIL 1009 Query: 426 ----KQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRR 481 K F + + IG++ N + +L+ + A + + N + Sbjct: 1010 SSLEKPFNLLTEEAFISASIGITL--YPDDGNDVSVLMRNAD--AAMYLGKRGGRNDFKF 1065 Query: 482 GAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMR--GDVYHEILLRMKGENDELI 539 M + E + ++ + L+ AL+ N F+L+ QPI +R + E LLR + Sbjct: 1066 YTMGMNEEAQSRLRIEKLLRYALKKNEFYLVYQPIIDLRFQTVIGAEALLRWNNPELGRV 1125 Query: 540 SPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEV 599 SPD F+ +A E GL S + WVI Q + + + A+NLSP +++ + Sbjct: 1126 SPDQFISIAEETGLISELGAWVISQACQEVVNWQTQGSPIWVAVNLSPRQFRESKLLEII 1185 Query: 600 SQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLK 659 S + I L E+TE L + ++ ++ L E+ +++IDDFGTGY++ + L Sbjct: 1186 SNAITLNGITNHYLELEITEKLLLEDFPGSKGIIEQLHEMDFRLSIDDFGTGYSALSYLI 1245 Query: 660 NVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGI 719 + LKID SFI +I N +V +I + K+ V+AE VE E + + G Sbjct: 1246 KFPFNRLKIDRSFIADIPHNQEVLALVKTIIAMGHGLKLQVIAEGVETTEQANILEAEGC 1305 Query: 720 DYMQGYLIGKPQPLIDTLNEIEPIRE 745 DY QGY +P + ++ + Sbjct: 1306 DYAQGYFFSRPLLSEEFRRYLQSHQN 1331 >UniRef50_B7HSZ4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=5 Tax=Bacillus cereus group RepID=B7HSZ4_BACC7 Length = 925 Score = 524 bits (1351), Expect = e-147, Method: Composition-based stats. Identities = 107/467 (22%), Positives = 200/467 (42%), Gaps = 29/467 (6%) Query: 288 YPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRA 347 +P +I + +V ++ + V T+++ + I+ AY D + LPN L Sbjct: 466 FPVEYVISSIKEGTEIV-GEVITFKDV--TQRKQMEEEIKYHAYFDSLTDLPNRVLLKDR 522 Query: 348 LR--------DAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQ 399 L A A+ YL + + + G +++++ LS + V + Sbjct: 523 LTQGLTYAQLHAEKLAVLYLDLDRFKFVNDTLGHSFGDLLLREVANRLSACVPKSATVSR 582 Query: 400 LSGNDLALRLNTESHQERI-----TALDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNH 454 G++ + L ++ + +DS + F + + M+ IG+S Sbjct: 583 QGGDEFTIYLPNIKSEKEVLKVVNRVIDSFSRPFHLVDNEIYMKTSIGISIFPDNGDTTE 642 Query: 455 IYLLLGELNTVAELSIVTNAPENM--QRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLM 512 I L A+ ++ + + + + + + + N L +ALE + Sbjct: 643 I------LVKNADTAMYKSKEISGSSYHFFSEGMDTRTFESIKLENDLYKALEQEELVIY 696 Query: 513 AQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMA 570 QP + + E L+R + +I PD F+P+A E GL I WV++ + + Sbjct: 697 YQPQINGKTNKIEGVEALIRWNHQEHGMIPPDKFIPIAEETGLIVPIGEWVLKEACRQLK 756 Query: 571 ENRAKM-PAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQA 629 + + P ++NLS + Q+ V +L + ++ + E+TE+ + N + Sbjct: 757 KWHDQGSPLISMSVNLSARQLEQSDLFAMVKNVLEEVELSPKYIQLELTENLIVRNTEST 816 Query: 630 QITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASI 689 T++ L+ LG +AIDDFGTGY+S LK + LKID SF++++ + D I +I Sbjct: 817 LKTMKKLKGLGINLAIDDFGTGYSSLGYLKKLPISTLKIDKSFVQDMTKD--DAAITNTI 874 Query: 690 CHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDT 736 LA+ + V+AE VE +E E + + MQGY +P D Sbjct: 875 ITLAKNLNLDVIAEGVETKEQVEFLSARNCYLMQGYFFSRPMAAEDI 921 >UniRef50_C6E011 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=2 Tax=Geobacter RepID=C6E011_GEOSM Length = 869 Score = 524 bits (1351), Expect = e-147, Method: Composition-based stats. Identities = 116/435 (26%), Positives = 200/435 (45%), Gaps = 24/435 (5%) Query: 318 RQRAVVRRIQRLAYVDPVVHLPNV--------RALNRALRDAPWSALCYLRIPGMEMLVK 369 Q +RI+ LA+ D V LPN +AL A R + A+ ++ + + + Sbjct: 424 EQELNEQRIEYLAHYDTVTKLPNRFSLMARLGQALELAKRFSSRLAVIFIDLDRFKNIND 483 Query: 370 NYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLN----TESHQERITALDSHL 425 + G + + +++ L + + V +L G++ + L S + + L Sbjct: 484 SLGHHIGDRLLFQVAGRLQDTIRSADIVARLGGDEFVVVLPLINSNISAAHAVRKIQQTL 543 Query: 426 KQ-FRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIV--TNAPENMQRRG 482 Q + + + P IG+S + EL A+L++ +A N + Sbjct: 544 SQGYTVESHELNITPSIGISVYPTDGET------VQELMKNADLAMYHAKSAGRNSYQFF 597 Query: 483 AMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELIS 540 + ++ ++ + + L+ ALE + L QP ++ V E LLR + ++ Sbjct: 598 TQEMNLTVQARLVLESDLRTALERDEMMLHYQPQIDLKSGEVVGVEALLRWRHPVRGAVA 657 Query: 541 PDSFLPVAHEFGLSSSIDMWVIEHTLQFMAEN-RAKMPAHRFAINLSPTSVCQARFPVEV 599 PD F+PVA + GL SI + ++ + +A + R A+NLS Q+ P + Sbjct: 658 PDVFIPVAEDTGLILSIGEFALKSACEQLALWISQGLSPLRMAVNLSARQFKQSNLPSLL 717 Query: 600 SQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLK 659 + +LA + A L E+TES+A+ + A + L+ L+E+G ++AIDDFGTGY+S + LK Sbjct: 718 ADILAATGVAAHLLELEITESSAMDDPNTAIVHLRTLREMGVELAIDDFGTGYSSLSYLK 777 Query: 660 NVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGI 719 + LKID SF+R I ++S D +I A+ LA VVAE VE E + Sbjct: 778 LFPVNRLKIDRSFVRGIDTDSEDAEIAAATIALAHNLGKEVVAEGVETEAQCRFLRGQQC 837 Query: 720 DYMQGYLIGKPQPLI 734 D +QGY +P Sbjct: 838 DILQGYFFSEPLSAA 852 >UniRef50_D2LQL8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LQL8_BACS4 Length = 1016 Score = 524 bits (1351), Expect = e-147, Method: Composition-based stats. Identities = 120/478 (25%), Positives = 209/478 (43%), Gaps = 34/478 (7%) Query: 291 YTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVR-------- 342 Y T +I + I + + + ++ ++I LA+ D + LPN R Sbjct: 545 YLTGDSIRDENGQAIRIIGSITNI--SEKKQQEKQIMHLAFHDGLTGLPNRRLLRSRLEL 602 Query: 343 ALNRALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGED------ 396 A+ A R L + + +++ G + QK++ L + + Sbjct: 603 AMTDADRYNYKLGLLLIDLDRFKVINDTLGHQAGDELIQKVADVLELTMRSPDTHSRAKQ 662 Query: 397 ----VYQLSGNDLALRLNTESHQERITALDSHLKQ---FRFFWDGMPMQPQIGVSYCYVR 449 V +L G++ + L + + A + + + FF + + Sbjct: 663 EHTTVARLGGDEFIILLTHITDVSDLQASANLIIEKFKEPFFIQNQDVFTSASIGISVYP 722 Query: 450 SPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMY---LQRELKDKVAMMNRLQQALEH 506 L G A++++ A EN + + MY + ++ M N+L++ALE Sbjct: 723 DHGRDYDSLTGN----ADIAMYR-AKENGKNQMEMYSSEINTLTMERFQMENQLRKALER 777 Query: 507 NHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEH 564 F L QP + + + E LLR + ++SP F+P+A E GL I WV++ Sbjct: 778 EEFVLHYQPQFHLENNEVLGIEALLRWNSSDRGIVSPMEFIPLAEETGLIIPIGYWVLKE 837 Query: 565 TLQFMAENRAKMPAHR-FAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNAL 623 + + + ++N+S + + F V +L Q+ L E+TES A+ Sbjct: 838 ACRQNKRWMDQGHRPKIVSVNISARQLQEKDFVQAVKSILEDTQLPTQYLCLEITESTAI 897 Query: 624 TNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDY 683 N+ + L+ L ELG +IAIDDFGTGY+S A LK + +KID SFIR++ + D Sbjct: 898 KNIDISMNMLKELGELGIKIAIDDFGTGYSSLAMLKQLPISNIKIDKSFIRDMDVDKDDG 957 Query: 684 QIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIE 741 IV +I +A ++ V AE VE E+ + +L +Y+QGYL KP P + L ++ Sbjct: 958 AIVRAIIAMAHSLELTVTAEGVETEDQKNILLQEKCNYLQGYLYSKPLPAEECLRFVQ 1015 >UniRef50_A4U4T7 Two-component sensory box protein n=3 Tax=Magnetospirillum RepID=A4U4T7_9PROT Length = 828 Score = 524 bits (1351), Expect = e-147, Method: Composition-based stats. Identities = 124/515 (24%), Positives = 219/515 (42%), Gaps = 27/515 (5%) Query: 254 MMWGAMRYGYKLISLLWAVVLM-----ISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFI 308 + + R+ + LW V+L I + ++ G+ + + V +F+ Sbjct: 312 RLLASGRHDHDFFIQLWTVLLRDGKWQGEIWDRRKDGEMFAGWQNIAVVRDTDGKVQNFV 371 Query: 309 VNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNV--------RALNRALRDAPWSALCYLR 360 + T ++ V R+ A DP+ LPN RA+ RA R+ AL ++ Sbjct: 372 AVISDI--TTRKQVEERLSYAANHDPLTRLPNRTLFQERLTRAIARASRNHNLVALLFID 429 Query: 361 IPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITA 420 + + + G + Q+++ LS + G+ V +LSG++ + L Sbjct: 430 LDRFKQVNDTMGHLAGDMLLQQVAERLSSCIRQGDTVARLSGDEFTIILEDVQDPRDAAV 489 Query: 421 LDSHL-----KQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAP 475 + + + + IGVS + L L + A + + Sbjct: 490 VGHKVLRLLQEPVALTGGEAHISSSIGVSLYPTDAGDPQTLLKLAD----AAMYRAKHLG 545 Query: 476 ENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKG 533 N + + + E +++A+ N L+ A++ F L QPI ++ V E LLR + Sbjct: 546 RNSCQFHSEAVNAEAFERLALENALRGAVDQGQFLLHYQPIFDVKSGRAVAVEALLRWRH 605 Query: 534 ENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENR-AKMPAHRFAINLSPTSVCQ 592 +++P+ FL +A E G+ I WV + + R A R INLSP + Q Sbjct: 606 PEVGVVAPNQFLALAEETGMIVPIGRWVFDQACRQAKLWRDAGHVDLRLHINLSPRQLRQ 665 Query: 593 ARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGY 652 V+ L Q+ L+ EV E+ + LG +AID+FG+GY Sbjct: 666 PDLIEMVAAALEVSQLPPQALVLEVMETCVIDKAFDPSALFARFAALGVGLAIDEFGSGY 725 Query: 653 ASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIRE 712 +S+A L+ + +LK+ SF+RN+ S+ + +IV +I LAR M VVA +EN+ + Sbjct: 726 SSFAFLRRLPVTILKVAQSFVRNLSSSEDESEIVTAIVALARGLHMTVVAPGIENKAQLD 785 Query: 713 AVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIRESA 747 + G D +QG+L+ KP P + ++ R A Sbjct: 786 FLTGFGCDKVQGFLLSKPLPGTEMTEFLDLKRSPA 820 >UniRef50_A1WHK3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WHK3_VEREI Length = 859 Score = 524 bits (1350), Expect = e-147, Method: Composition-based stats. Identities = 106/471 (22%), Positives = 189/471 (40%), Gaps = 31/471 (6%) Query: 295 LTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVR--------ALNR 346 I V + + T ++ + I+RLA+ D + LPN R ++ Sbjct: 387 TPIRDLHGRVTGVLGVCRDI--TERKRAAQEIERLAFYDALTGLPNRRLLLDRLQRSIAT 444 Query: 347 ALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLA 406 R AL ++ + + L G + Q +++ L + + V + G++ Sbjct: 445 CQRTHKLGALLFIDLDNFKDLNDTLGHDMGDQLLAQVATRLVASVRAADTVARFGGDEFV 504 Query: 407 LRLNTESHQERITALDSHL----------KQFRFFWDGMPMQPQIGVSYCYVRSPVNHIY 456 + L + R + + + F IGV+ Sbjct: 505 VMLEALAPDLRTATAQAEMVADKLLASLNQPFALDGGQHYSTLSIGVTLF------GEQR 558 Query: 457 LLLGELNTVAELSIV--TNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQ 514 L + EL A+L++ A N QR +Q + + + L+Q L + Q Sbjct: 559 LSVDELLKRADLALYQAKAAGRNTQRFFDPDMQAAVNARSNLEADLRQGLARAELLVYYQ 618 Query: 515 PITGMRGDV-YHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENR 573 P+ + + E L+R + +I P F+P+A + GL + +V++ + Sbjct: 619 PVVDHQARLMGAEALVRWRHPQRGMIGPADFIPLAEQTGLILPLGQYVLQTACAQLQRWS 678 Query: 574 AK--MPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQI 631 ++N+S Q F +V L + + +L E+TES L +++ Sbjct: 679 QHPDTAGLSISVNVSARQFRQPGFVAQVLHQLKSHGADPRRLKLELTESLLLGDIEDTIA 738 Query: 632 TLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICH 691 + L+ G A+DDFGTGY+S + LK + D +KID SF+R ++++ D IV +I Sbjct: 739 RMAQLKSEGVGFALDDFGTGYSSLSYLKRLPLDQIKIDQSFVREVLADPNDAAIVRTILA 798 Query: 692 LARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEP 742 LA+ + VVAE VE + G + QGYL G+P P+ P Sbjct: 799 LAKSLDLQVVAEGVETTGQLSFLQLHGCEGFQGYLFGRPVPMEVFACAHRP 849 >UniRef50_C6WW34 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WW34_METML Length = 623 Score = 524 bits (1350), Expect = e-147, Method: Composition-based stats. Identities = 117/457 (25%), Positives = 204/457 (44%), Gaps = 25/457 (5%) Query: 311 YMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL--------RDAPWSALCYLRIP 362 ++ R++ +IQ LAY D + +LPN L L R AL ++ + Sbjct: 166 FLQQDIARRKEAEDKIQHLAYYDLLTNLPNRLLLIDRLQHTLAMSARHQNHGALLFIDLD 225 Query: 363 GMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALD 422 + L G + +++ L + G+ + +L G++ + L S A+ Sbjct: 226 HFKTLNDTKGHSVGDLLLVEVAKRLQTCMREGDTLARLGGDEFVVILQDLSEDSSQAAVQ 285 Query: 423 SH--------LKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIV--T 472 + ++ D V C R + + EL A++++ Sbjct: 286 AETVCAKIISAINLPYYLDSYLYHSSTSVGVCLFR----NQEFTVDELLKRADIAMYQAK 341 Query: 473 NAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDVY-HEILLRM 531 +A N QR +Q L+ + A+ + L+ A++ N F L Q G+V+ E L+R Sbjct: 342 SAGRNTQRFYDPTMQAALEARAALESDLRLAIKKNQFRLYYQMQVDHSGNVHGAEALIRW 401 Query: 532 KGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAK--MPAHRFAINLSPTS 589 + L+ P F+P+ E GL I WV+E + + + A+N+S Sbjct: 402 QHPQKGLVPPLQFIPLTEETGLIIPIGHWVMETACAQIKRWESDPLTRNLQVAVNVSACQ 461 Query: 590 VCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFG 649 F ++L++++I+ L E+TES L NV++A + +Q L+ G ++DDFG Sbjct: 462 FHDPSFVERAIEMLSRHKIKPGNLKLELTESLVLDNVEEAIMKMQALKSYGVLFSMDDFG 521 Query: 650 TGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEE 709 TG++S + L + D LKID SFIRN+ N+ D +V +I +A + V+AE VE+E Sbjct: 522 TGFSSLSYLTKLPLDQLKIDQSFIRNMCMNNRDAVVVQTIIGMANNLGIEVIAEGVESET 581 Query: 710 IREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIRES 746 RE + + QGYL +P P+ N++ I Sbjct: 582 QREFLEQNKCNLCQGYLFSQPLPIDAFENKLRQIHAG 618 >UniRef50_B1Y3M1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y3M1_LEPCP Length = 745 Score = 524 bits (1350), Expect = e-147, Method: Composition-based stats. Identities = 108/508 (21%), Positives = 209/508 (41%), Gaps = 29/508 (5%) Query: 254 MMWGAMRYGYKLISLLW-----AVVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFI 308 + + R+ + +W + + + +Y + T + V ++ Sbjct: 235 RLLHSGRHDPAFYAAMWDSLQRTGTWQGEVWNRRKCGEVYAEWLTITAVQDEHRTVTRYV 294 Query: 309 VNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL--------RDAPWSALCYLR 360 + + ++++A I +LA+ DP+ LPN R L L R AL ++ Sbjct: 295 GTMLDI--SQRKAREEEIAQLAFYDPLTGLPNRRLLKDRLNQAMAISARSQREGALLFID 352 Query: 361 IPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRL---------NT 411 + + + G Q ++ LS + G+ V ++ G++ + L Sbjct: 353 LDHFKDINDTRGHDKGDLLLQNVAQRLSGCVREGDTVARIGGDEFVVMLGADLSTATDEA 412 Query: 412 ESHQERITALDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIV 471 SH + + G + + + + LL + + Sbjct: 413 ASHARSVAEKILAALNLPYLMSGEFVHCSASLGVALFNDHHDTVDELLKRADQA--MYQA 470 Query: 472 TNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDV-YHEILLR 530 N R +Q+ + + A+ L+ A++ + L QP+ + + E L+R Sbjct: 471 KAGGRNTLRFFDTAVQQTMMLRAALEAELRLAVQRDELVLCYQPVIDHQNRLLGAEALVR 530 Query: 531 MKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRA--KMPAHRFAINLSPT 588 K L+SP F+P+A + GL +I WV+E +A A ++N+S Sbjct: 531 WKHPRRGLVSPAEFIPIAEDRGLIQAIGRWVLETACTQLATWAADPATADLVLSVNVSAR 590 Query: 589 SVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDF 648 + + +F V ++LA +L E+TE+ L +V + ++ L+ G ++A+DDF Sbjct: 591 ELHEPQFVERVIEILACTGARPARLKIELTENAVLDHVDDSIAKMKRLKAHGIRLALDDF 650 Query: 649 GTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENE 708 GTG+ S + LK + D LKID +F++++++++ D I +I L + VVAE VE Sbjct: 651 GTGHGSLSLLKRLPLDELKIDRTFVQDLLTDTHDAAIARTIAALGLNLGISVVAEGVETP 710 Query: 709 EIREAVLSLGIDYMQGYLIGKPQPLIDT 736 R+ +++ G QG L G P L Sbjct: 711 AQRDLLIACGCRIFQGDLFGPPAALEAL 738 >UniRef50_A3J8I8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Marinobacter sp. ELB17 RepID=A3J8I8_9ALTE Length = 1020 Score = 524 bits (1350), Expect = e-147, Method: Composition-based stats. Identities = 116/498 (23%), Positives = 205/498 (41%), Gaps = 32/498 (6%) Query: 254 MMWGAMRYGYKLISLLWAVVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMA 313 +W +R +W + + Y + T I S +V +++ + Sbjct: 531 YLWARVRESGSWEGEIWNL---------RKDGEAYAEWLTITAICGKSGVVQNYVGTFHD 581 Query: 314 VLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL--------RDAPWSALCYLRIPGME 365 + T+++ R RLA+ D + L N L L R +AL Y+ + + Sbjct: 582 I--TKRKKAEREAHRLAFYDSLTGLANKALLEERLSEVCKANTRQNTHAALLYVDVEQLR 639 Query: 366 MLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITA----- 420 + G + ++ L ++ + + ++ G++ A+ L+ + + + A Sbjct: 640 SVNDARGYEFGDLVLKAIAEQLGTMVRESDTLARIGGDEFAILLSNLNPSQDVAARVTEG 699 Query: 421 -----LDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAP 475 LD+ + + + IG++ RS L E T Sbjct: 700 VADKVLDAFTRPIEVLQQKIQVNISIGITLIDGRSSPVDQQLQRAEQATQQAKEQAKLRG 759 Query: 476 ENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDV-YHEILLRMKGE 534 E +Q ++ V M L+ AL L QP + +E+LLR + Sbjct: 760 EKRISFFDPEIQAQVVQHVLMEEELRNALAEEQLVLYYQPQIRNPNQLLGYEVLLRWRHP 819 Query: 535 NDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAK--MPAHRFAINLSPTSVCQ 592 ++SP F+P+A + L I W+IE + +A +++ A+N+S Sbjct: 820 KRGIVSPAVFIPIAEQSRLILPIGRWIIEQACEKLAAWQSEPTTSELSLAVNVSIIQFQS 879 Query: 593 ARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGY 652 F +V Q+L K L EVTES + + ++ + L+ +G + ++DDFGTGY Sbjct: 880 NNFVEQVGQILEKTGAPPRLLKLEVTESLLMNDPERITEMMNRLRSMGVRFSLDDFGTGY 939 Query: 653 ASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIRE 712 +S + L + D +KID SFI + +N IV SI LA+ + V+AE VE EE R Sbjct: 940 SSMSYLNQLPLDQIKIDQSFINEVANNLASSAIVESIIGLAKGLNLEVIAEGVETEEQRN 999 Query: 713 AVLSLGIDYMQGYLIGKP 730 + + G QGYL G+P Sbjct: 1000 WLANHGCQNFQGYLFGRP 1017 >UniRef50_Q12GF0 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=3 Tax=Polaromonas RepID=Q12GF0_POLSJ Length = 989 Score = 524 bits (1350), Expect = e-147, Method: Composition-based stats. Identities = 114/468 (24%), Positives = 192/468 (41%), Gaps = 31/468 (6%) Query: 292 TTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRDA 351 +++ + + + ++ + T+++A +I LA+ DP+ LPN + L L A Sbjct: 521 LEIVSVAAQNGDLTHWVAVGRDI--TQRKAADEKIHHLAFYDPLTELPNRQLLLDRLEQA 578 Query: 352 --------PWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGN 403 L ++ + ++L G QK++ L + + V +L G+ Sbjct: 579 LADCTITRQEGVLMFIDLDNFKILNDTVGHSKGDLLLQKVAVRLKGCVRKLDTVARLGGD 638 Query: 404 DLALRLNTESHQERIT----------ALDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPVN 453 + + L Q L + + + IGV+ P N Sbjct: 639 EFVVMLQDLGTQPEAATRKAQIVAEKVLATLREPYDLAGYQHYSTSSIGVT------PFN 692 Query: 454 HIYLLLGELNTVAELSIVTNA--PENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFL 511 + EL A+L++ N +Q + A+ L+ L + F + Sbjct: 693 ARQGSVSELLKQADLAMYQAKTMGRNTVCFFDPDMQASVSANAALSTDLRAGLREHQFLV 752 Query: 512 MAQPITGMRGDV-YHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMA 570 QP + E LLR K ++SP F+PVA E GL + WV+E +A Sbjct: 753 HYQPQVDREQRITGVEALLRWKHPQRGMVSPAEFIPVAEETGLILPLGQWVLEQACLQLA 812 Query: 571 ENRAKMP--AHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQ 628 + + A+N+S F V + I+ L E+TES ++ Sbjct: 813 VWQKRPETAGLSIAVNVSVRQFRHPDFVDMVMAAIKHTGIQPHNLKLELTESLLADRMEI 872 Query: 629 AQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVAS 688 A + L+ LG +A+DDFG GY+S + LK + D LKID SFI ++ S+ D I ++ Sbjct: 873 AIAKMGTLKALGVTLALDDFGMGYSSLSYLKRLPLDQLKIDKSFIADVFSDPNDAAICSA 932 Query: 689 ICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDT 736 I LA+ + V+AE VE E R + LG Y QG+L P P+ + Sbjct: 933 IISLAQSLGLDVIAEGVETEAQRSFLAGLGCGYYQGFLFCPPLPIAEF 980 >UniRef50_Q609J7 Sensory box protein n=1 Tax=Methylococcus capsulatus RepID=Q609J7_METCA Length = 712 Score = 523 bits (1348), Expect = e-147, Method: Composition-based stats. Identities = 102/434 (23%), Positives = 198/434 (45%), Gaps = 16/434 (3%) Query: 317 TRQRAVVRRIQRLAYVDPVVHLPNV--------RALNRALRDAPWSALCYLRIPGMEMLV 368 T++R RI+ LA+ DP+ +LPN +A+ A R+ A+ ++ + + + Sbjct: 270 TQRREAEDRIKHLAHHDPLTNLPNRVFLHGRLEQAIELARREQNQVAVMFIDLDNFKRIN 329 Query: 369 KNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLKQ- 427 G + ++++ L+ + + V +L G++ + + A+ + + Sbjct: 330 DTLGHRIGDALLEQVAARLTENVPGSQVVGRLGGDEFIVVITGNRVSTTSAAMAERILES 389 Query: 428 --FRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMY 485 + + + + + N L+ + A + + N + Sbjct: 390 LCRPYTVEDYQLHSGASIGIAIYPADGNSAETLMKHAD--AAMYHAKSRGRNTFEFFSQA 447 Query: 486 LQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDVYH--EILLRMKGENDELISPDS 543 + R +++++ + N L+ AL+H F L QP + E LLR + +I+PD Sbjct: 448 INRGVRERLDIENGLRDALKHGGFKLHYQPQIDLTTGSICSVEALLRWRHPLLGVIAPDR 507 Query: 544 FLPVAHEFGLSSSIDMWVIEHTLQFMAENR-AKMPAHRFAINLSPTSVCQARFPVEVSQL 602 F+P+A E L + +WVI+ + R + R A+N+S + F + + Sbjct: 508 FIPIAEETKLILPLGLWVIDRACHQLRAWRNDGIAGVRMAVNVSVKQLQDESFFEALGSI 567 Query: 603 LAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVN 662 + ++ + + E+TES + N+ + Q L+ LQ+ G ++IDDFGTGY+S RLK + Sbjct: 568 VERHGLSGSDIELEITESAIMENLSRVQALLKSLQDYGITLSIDDFGTGYSSLGRLKLLP 627 Query: 663 ADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYM 722 LKID SF+ +I ++ + +I I L + ++AE VE + + + + G D + Sbjct: 628 IQSLKIDRSFVHDIETDHGNAKICDGIIALGHSLGLKIIAEGVETDAQKNLLQNSGCDAI 687 Query: 723 QGYLIGKPQPLIDT 736 QG+LI KP P D Sbjct: 688 QGFLIAKPLPADDV 701 >UniRef50_C1DB08 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DB08_LARHH Length = 1092 Score = 523 bits (1348), Expect = e-147, Method: Composition-based stats. Identities = 130/488 (26%), Positives = 207/488 (42%), Gaps = 20/488 (4%) Query: 260 RYGYKLISLLWAVVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQ 319 R+ + W ++ + Y ++ + ++ V FI + + A Sbjct: 598 RWELAEQTGRWQGEIVC----RRRSGEHYYEWSALSVVRHANGSVLYFIGQFSDISA--V 651 Query: 320 RAVVRRIQRLAYVDPVVHLPNVRALNRAL-----RDAPWSALCYLRIPGMEMLVKNYGIM 374 +A R RLA DP+ LPN L L R+ A+ + + + + + G Sbjct: 652 KAAEARALRLACFDPLTGLPNRSLLFDRLQEVLNREPHNGAVLFCDLDRFKNINDSLGHT 711 Query: 375 LRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHL---KQFRFF 431 L ++++ L + PG+ V + G++ L L S + L L Sbjct: 712 LGDAVLKEVARRLVARVRPGDTVCRYGGDEFVLVLPGLSDCVVLEQLAEQLLADVSSPIL 771 Query: 432 WDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELK 491 DG+ ++ + N LL + A L + N R + + Sbjct: 772 LDGLDLRVTPSLGVAVFPRDGNDCDALLRHAD--AALYHAKSRGRNTYRFFTREIDDRVS 829 Query: 492 DKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAH 549 + + + + L+ ALE F L QP M V E LLR K +ISP F+P+A Sbjct: 830 EYLHIEHGLRSALERGEFELHYQPQVDMAFGRVVGVEALLRWKHPEQGMISPVRFVPIAE 889 Query: 550 EFGLSSSIDMWVIEHTLQF-MAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQI 608 E GL I MWVI + M RA + A+NLS + + + LA + Sbjct: 890 ETGLIVPIGMWVIREACRQAMLWRRAGLRPMTMAVNLSGRQFSR-SVIEAIDEALADSGL 948 Query: 609 EAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKI 668 + L EVTES + + ++A L+ L+ G +A+DDFGTGY+S A LK D LKI Sbjct: 949 DPRWLQVEVTESVIMEDTQEAYTVLEALRARGLTVAVDDFGTGYSSLAYLKRFPIDKLKI 1008 Query: 669 DGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIG 728 D SFIR+I + + IV +I +A ++ V+AE VE + + G D +QGYL+ Sbjct: 1009 DRSFIRDIDLDEDNPVIVDAIIGMAHNLRIKVLAEGVETRAQWDYLRQQGCDEVQGYLVS 1068 Query: 729 KPQPLIDT 736 +PQP Sbjct: 1069 RPQPAAAL 1076 >UniRef50_Q5P8Z7 Sensory box/GGDEF family protein n=3 Tax=cellular organisms RepID=Q5P8Z7_AZOSE Length = 1008 Score = 523 bits (1348), Expect = e-147, Method: Composition-based stats. Identities = 118/468 (25%), Positives = 198/468 (42%), Gaps = 19/468 (4%) Query: 289 PGYTTQLTITSSSYLVFS--FIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNR 346 G Q++++S + ++ ++ + T ++ RI+ LA+ D + LPN Sbjct: 502 NGAVRQVSLSSRYIDIDGEKHVLTFVHDI-TDRKEAQARIEYLAHHDALTGLPNRVLFRD 560 Query: 347 --------ALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVY 398 A R AL ++ + + + G + Q ++ L L + V Sbjct: 561 RFALATAWAERAHAKVALLFVDLDHFKTINDTLGHPVGDGLLQGVALRLRECLRETDTVS 620 Query: 399 QLSGNDLALRLNTESHQERITALDSHLKQ---FRFFWDGMPMQPQIGVSYCYVRSPVNHI 455 +L G++ + L + I + + + F +G + + + Sbjct: 621 RLGGDEFLIALTDIRDPQAINSATAKIFDTLTRPFELEGHELTNTMSIGIAIWPDDGEDF 680 Query: 456 YLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQP 515 LL +T + A N R + +++ + L ALE++ F L QP Sbjct: 681 DTLLKNADTA--MYQAKRAGRNTWRFYTEQMNANAVEQLQLRTALHSALENDEFLLHYQP 738 Query: 516 ITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAEN- 572 + V E LLR + EL+ PD F+P A E GL I WV+ Sbjct: 739 QINLASGHVVGVEALLRWHWDKRELVPPDRFIPAAEESGLIVPIGDWVLREACMQAVRWT 798 Query: 573 RAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQIT 632 R +P A+NLS + V + L+ ++ +L E+TES L + + T Sbjct: 799 RQGLPELTIAVNLSAVQFRRGDLERSVVRALSLSGLDPARLELELTESLLLVDTESVIET 858 Query: 633 LQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHL 692 L+ L+ LG +++IDDFGTGY+S A LK D LKID SF+R+I ++ D IV +I + Sbjct: 859 LRRLKSLGVRLSIDDFGTGYSSLAYLKRFAVDKLKIDQSFVRDIATDPDDAAIVRAIVSM 918 Query: 693 ARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEI 740 A K+ V+AE VE+E+I + D QGY +P P + Sbjct: 919 AHTLKLQVIAEGVESEDIDRFLHIFNCDEAQGYHYARPMPGDALAEWL 966 >UniRef50_Q89VU0 Bll0955 protein n=2 Tax=cellular organisms RepID=Q89VU0_BRAJA Length = 955 Score = 523 bits (1347), Expect = e-146, Method: Composition-based stats. Identities = 103/453 (22%), Positives = 176/453 (38%), Gaps = 24/453 (5%) Query: 306 SFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRDAPW--------SALC 357 ++V Y V T + R+ +A D + LPN + + A+ Sbjct: 507 GWVVTYEDV--TERHKAQARVAHMARHDSLTDLPNRTLFREKMGEGLNQVAIAGGAMAVL 564 Query: 358 YLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQER 417 + + + G + + ++ L + + V +L G++ A+ Q Sbjct: 565 CFDLDNFKTVNDRLGHAAGDRLLRWVAARLKENVGEHDTVARLGGDEFAVLQRGPQPQSA 624 Query: 418 ITALDSHLK--QFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIV--TN 473 ++ + + + V EL A+L++ Sbjct: 625 EKLARRLVEIIGHPPPLESQSIHVGVSVGIAIAPDHGLDAD----ELMKCADLALYQAKA 680 Query: 474 APENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRM 531 + ++ E + + A+ + L+ ALE F L+ QP + E LLR Sbjct: 681 RGRGAYQLFEPEMEEEARSRHALEHNLRGALEAREFHLVFQPQVRLESSELTGFEALLRW 740 Query: 532 KGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVC 591 K + +SP F+P+A E GL I WV+ A P A+NLSP Sbjct: 741 KHPSRGFVSPAEFIPIAEENGLIVPIGEWVLRTACATAASW----PDVTVAVNLSPVQFR 796 Query: 592 QARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTG 651 V+ LA+ + +L EVTE+ L + + L L+ LG ++++DDFG G Sbjct: 797 ARGLAAMVTSALAEAGLPPQRLELEVTETALLDDSEATIEILHQLRALGVRVSLDDFGVG 856 Query: 652 YASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIR 711 Y+S + L+ D +KID SF+ + + IV +I L + + AE VE EE Sbjct: 857 YSSLSYLRKFPFDRIKIDRSFVGTLGESPESVAIVRTIASLGSVLGVETTAEGVETEEQL 916 Query: 712 EAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIR 744 + V G +QGY G+P P + IE + Sbjct: 917 DFVRECGCTAVQGYYFGRPCPAAEVARTIETLN 949 >UniRef50_B8HWB1 Diguanylate cyclase/phosphodiesterase with FHA and GAF sensor n=2 Tax=Cyanothece sp. PCC 7425 RepID=B8HWB1_CYAP4 Length = 884 Score = 523 bits (1347), Expect = e-146, Method: Composition-based stats. Identities = 113/455 (24%), Positives = 203/455 (44%), Gaps = 27/455 (5%) Query: 308 IVNYMAVLAT---RQRAVVRRIQRLAYVDPVVHLPNVR--------ALNRALRDAPWSAL 356 ++ MAV + +++ + I+ A+ D + LPN AL+ A R ++ Sbjct: 423 VLAMMAVSISGAIQRQHKEQVIRYQAFHDLLTDLPNRALFIDRLNLALSNAHRSGEKLSV 482 Query: 357 CYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQE 416 +L + + + G + Q + ++H L+ L G+ + + G++ + L Sbjct: 483 LFLDLDRFKTINDTLGHSVGDQLLKAVAHRLTHCLREGDTIARWGGDEFTILLPQIHQVN 542 Query: 417 RITALDSHL-----KQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIV 471 + + + F + + P IG++ + L A++++ Sbjct: 543 DVAKTAQRMLSALEQPFHLENHELYITPSIGIAIYDLDGHDGET------LIKHADMALY 596 Query: 472 TNA--PENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEI 527 N + L +++ + L+ ALE F L QP ++ E Sbjct: 597 QAKQLGRNTYQFFCSGLSNGAPERLNLEKSLRHALERQEFLLYYQPQVNIKTGKITGMEA 656 Query: 528 LLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAK-MPAHRFAINLS 586 LLR K L+ P F+ VA E GL +I WV+ + + +P A+NLS Sbjct: 657 LLRWKHPEMGLVIPQLFMSVAEESGLIVAIGEWVLRTACAQNKTWQDQGLPPICIAVNLS 716 Query: 587 PTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAID 646 Q ++++L + + L E+TE+ A+ +++ + LQ LQ++G QI++D Sbjct: 717 ARQFRQPDLTGMIARILDETGLPPQYLDLEITETTAIQDIEFTKRVLQELQDMGIQISMD 776 Query: 647 DFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVE 706 DFGTGY+S A L+ + LKID SF+R++ +NS D QIV ++ LAR + VVAE VE Sbjct: 777 DFGTGYSSLAHLQQFPLNTLKIDRSFVRDVAANSRDAQIVTAVIGLARGLNLNVVAEGVE 836 Query: 707 NEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIE 741 N+E + SL + QGY+ +P ++ Sbjct: 837 NDEQLNCLESLHCEEAQGYIFNRPLEADAATEILQ 871 >UniRef50_Q74FR9 Sensory box/GGDEF family protein n=1 Tax=Geobacter sulfurreducens RepID=Q74FR9_GEOSL Length = 682 Score = 523 bits (1347), Expect = e-146, Method: Composition-based stats. Identities = 107/471 (22%), Positives = 206/471 (43%), Gaps = 26/471 (5%) Query: 293 TQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNV--------RAL 344 ++ ++ + + + + T ++ IQ+LAY D + LPN + L Sbjct: 207 SKTVFGNTDGSIGGIVGTILDI--TERKRAEEAIQQLAYFDALTGLPNRTLLRDRVSQLL 264 Query: 345 NRALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGND 404 ++A R+ + +L + + + + G ++ ++ + + V +L ++ Sbjct: 265 SQARREGGGFGVLHLDVDRFKGVNDSLGHACGDVLLSTVAGRIASSIRESDTVARLGSDE 324 Query: 405 LALRLNTESHQERITALDSHL-----KQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLL 459 + L H+E + A+ + + + + IG++ I Sbjct: 325 FVVILPGVGHEEDVVAVVRKIVEELNRPIVIQGNDIFCTASIGIAIYPTDGSSADI---- 380 Query: 460 GELNTVAELSIVTNA--PENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPIT 517 L A++++ + + + L +++ + L++ALE F L QP+ Sbjct: 381 --LLKNADMAMHKAKEFGGDGYQFYSSELNHRAMERLTLETSLRRALERREFLLHYQPLL 438 Query: 518 GMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAE-NRA 574 G+ V E LLR ++SP F+P+A E GL I WV+ + + + Sbjct: 439 GIGSGRIVGVEALLRWDSPELGMVSPARFIPLAEETGLIVPIGEWVLRSACEQLRALHEL 498 Query: 575 KMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQ 634 ++N+S F V+ +LA ++ L E+TES + + A+ L+ Sbjct: 499 GYTELCVSVNVSARQFRHDGFCAMVAAVLAAVGLDPRYLELELTESVIMERSETAKGILR 558 Query: 635 HLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLAR 694 L+++G +AIDDFGTGY+S + LK+ D LKID +F++ + + + I +I LA Sbjct: 559 KLKQMGVSLAIDDFGTGYSSLSYLKHFPIDRLKIDRTFVKEVTVDQDNAAIAEAIVALAH 618 Query: 695 MKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIRE 745 + + VVAE VE E + +L D +QGY I +P P + L +E +E Sbjct: 619 VLNLDVVAEGVETAEQLAFLAALRCDVVQGYHIARPLPPRNLLEFLEARQE 669 >UniRef50_Q221U3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q221U3_RHOFD Length = 1037 Score = 523 bits (1347), Expect = e-146, Method: Composition-based stats. Identities = 114/470 (24%), Positives = 193/470 (41%), Gaps = 23/470 (4%) Query: 282 QNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNV 341 + I+ G + + I T ++ +IQ+LA+ D + LPN Sbjct: 567 KKNGDIFHGLMSAEKVRFKDVDCILSITR----DITEKKLAEAQIQQLAHFDQLTGLPNR 622 Query: 342 RALNR--------ALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEP 393 L+ A R A+ +L + + + G + Q +S L L Sbjct: 623 SQLHDRFRYALSLAQRHGDQLAIMFLDLDHFKNINDTLGHSVGDQLLVDVSRRLKAALRE 682 Query: 394 GEDVYQLSGNDLALRLNTESHQERITA----LDSHLKQFRFFWDGMPMQPQIGVSYCYVR 449 + + +L G++ L L + L + + + + + IG++ Sbjct: 683 EDSLSRLGGDEFILLLPGTDEAQASQVATKLLAAVAQPCQIEQNELVSTVSIGIAL---- 738 Query: 450 SPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHF 509 P + N A + V A N R +Q + ++N L+ AL + F Sbjct: 739 YPNDGQDFETLSKNADAAMYRVKQASRNDFRFFTQEMQTHSARTLQLVNALRHALPRHEF 798 Query: 510 FLMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQ 567 L QP ++ V E LLR + +ISP F+P+A + G +I WV+ ++ Sbjct: 799 ELHFQPQVALQDGHIVGAEALLRWRHPELGMISPAEFIPIAEDSGQILAIGEWVLRTAVR 858 Query: 568 FMAEN-RAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNV 626 + + A + A+NLS V+++L + + L E+TE+ A+ + Sbjct: 859 QLKQWLDAGLRPMVIAVNLSAVQFRHPNLMALVTRILDEAALPPEFLELELTEAAAMDDP 918 Query: 627 KQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIV 686 A + L E G +++IDDFGTGY+S + LK + LKID SF+R+I + D IV Sbjct: 919 PAAIAIMNKLDEHGIRMSIDDFGTGYSSLSYLKKFKVNKLKIDQSFVRDISDDPDDKAIV 978 Query: 687 ASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDT 736 +I +LA M +AE VE + G D +QGY + KP P Sbjct: 979 TAIINLASSLGMHTIAEGVETASQLAFLRLQGCDEVQGYYVSKPLPKDQF 1028 >UniRef50_C6XCZ6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XCZ6_METSD Length = 869 Score = 523 bits (1347), Expect = e-146, Method: Composition-based stats. Identities = 121/509 (23%), Positives = 210/509 (41%), Gaps = 26/509 (5%) Query: 255 MWGAMRYGYKLISLLW-----AVVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIV 309 + + + K +W + + + Y + T TI + V + Sbjct: 366 ILASGKQDRKFYEEMWHLLDSNGKWQGEVWNRRKNGESYAEWLTIDTIYNEHGEVIRRVA 425 Query: 310 NYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL--------RDAPWSALCYLRI 361 + + T+ + I R A D + LPN R L+ L R+ A+ +L + Sbjct: 426 LFSDI--TKNKQNQEVIWRQANFDQLTGLPNRRMLHDRLNQEILKADRNHQMLAVLFLDL 483 Query: 362 PGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITAL 421 + + YG ++ Q Q+ +H L + + V +L G++ + L+ ++ + + Sbjct: 484 DRFKEVNDTYGHLMGDQLLQESAHRLLHSVRECDTVARLGGDEFVVILSGLQDKDVVQDI 543 Query: 422 DS-HLKQF--RFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENM 478 LK+F F D + + N +L + + + N N Sbjct: 544 AQSILKKFDTPFQLDNDLTHVSVSIGITIYPEDGNAGEVLFKNADQA--MYVAKNNGRNR 601 Query: 479 QRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDVYH--EILLRMKGEND 536 +Q ++++ + N L AL F L QPI + H E LLR + Sbjct: 602 YSYFTASMQAHAQNRMRLSNDLHLALPGQQFELYYQPIVELATGQVHKAEALLRWQHPTR 661 Query: 537 ELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRA-KMPAHRFAINLSPTSVCQARF 595 +I PD+F+P+A E GL I WV + + ++ + + +IN SP Sbjct: 662 GMIPPDNFIPLAEETGLIVDIGNWVFYEAARQVKRLQSLHHASFQISINKSPVQFHNETH 721 Query: 596 --PVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYA 653 +S LL + ++ E+TE + + L ++ G Q+A+DDFGTGY+ Sbjct: 722 GHEAWISFLLMN-DLPRQSIVVEITEGLLMHTDESISAQLLGFRDAGVQVALDDFGTGYS 780 Query: 654 SYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREA 713 S + LK + D LKID F+RN+ NS D + +I +A + V+AE +E EE RE Sbjct: 781 SLSYLKKFDIDYLKIDRIFVRNLSRNSSDMALCEAIVMMAHKLDIKVIAEGIETEEQREL 840 Query: 714 VLSLGIDYMQGYLIGKPQPLIDTLNEIEP 742 + +G D+ QGYL P P + P Sbjct: 841 LQQIGCDFGQGYLFSPPLPAPAFEAYLRP 869 >UniRef50_A0Y401 PAS sensor diguanylate cyclase/phophodiesterase n=1 Tax=Alteromonadales bacterium TW-7 RepID=A0Y401_9GAMM Length = 739 Score = 523 bits (1347), Expect = e-146, Method: Composition-based stats. Identities = 122/479 (25%), Positives = 235/479 (49%), Gaps = 27/479 (5%) Query: 277 SIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVV 336 H +Y+ I + + S + + ++ + T ++ ++ + D + Sbjct: 269 MRHKNGSYVNIL---SRAFVVESEEGEITRLVGTHVDI--TARKKSEEKLSYQSSHDSLT 323 Query: 337 HLPNVRALNR--------ALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLS 388 L N R R A ALCY+ + +++ G + + ++L L Sbjct: 324 GLANRREFKRRVELLLSVAAEKRVDHALCYMDLDQFKVVNDTCGHLAGDELLRQLGSLLQ 383 Query: 389 PLLEPGEDVYQLSGNDLALRLNTES--HQERITAL-DSHLKQFRFFWDGMPMQPQIGVSY 445 ++ + V +L G++ A+ + S + R+T+L ++ +RF W+G + + + Sbjct: 384 KVVRKTDVVARLGGDEFAVLMENCSFDNAHRVTSLIQKEIEDYRFVWEGRSFRIGVSMGL 443 Query: 446 CYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRE----LKDKVAMMNRLQ 501 + Y+ E+ +A+++ + R Y E + ++ +NR+Q Sbjct: 444 I----QITDKYVDFTEVLKLADVACYIAKEKGRNRIHVHYDDDEELAVHQGEMQWVNRVQ 499 Query: 502 QALEHNHFFLMAQPITGM--RGDVYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDM 559 A++ N F + AQ I + + ++E+LLRM + +I P +FLP A + L +D Sbjct: 500 DAIDENRFKIYAQLIEPLACDKNKHYELLLRMVDDQGGIIPPGAFLPPAERYQLIVKVDS 559 Query: 560 WVIEHTLQFMAENRAKMPAHRF-AINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVT 618 W+IE+ + + N + F +INLS S+ F + V++ L + ++ FE+T Sbjct: 560 WMIENAFKMILNNPNFLKGVNFLSINLSGQSLTNEDFLIFVTEQLTLLGEHSEKICFEIT 619 Query: 619 ESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVS 678 E+ A++N++ A + L+ LGC A+DDFG+G +S+ LKN+ D LKIDG F+++I Sbjct: 620 ETAAISNLELASKFISQLKVLGCCFALDDFGSGLSSFGYLKNLKVDYLKIDGIFVKDIEV 679 Query: 679 NSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTL 737 + +D+ +V SI + + M +AE+VE I++ +L +G+DY QGY + KPQP+ + L Sbjct: 680 DPIDHAMVKSINEIGHVMGMKTIAEFVETSRIKQTLLEMGVDYAQGYAVHKPQPIEELL 738 >UniRef50_D2L724 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L724_9DELT Length = 827 Score = 523 bits (1347), Expect = e-146, Method: Composition-based stats. Identities = 107/441 (24%), Positives = 192/441 (43%), Gaps = 22/441 (4%) Query: 309 VNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNV--------RALNRALRDA-PWSALCYL 359 + Y+ + ++A +I A+ D + LPN RAL RA R A+ + Sbjct: 376 IVYIYQDISERKAFEEQITHQAFHDALTGLPNRSLFADRLERALTRARRRGDSQYAVLMI 435 Query: 360 RIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERIT 419 + + + G Q +++ LS + + V +L G++ A+ L ++ + Sbjct: 436 DLNKFKGVNDTLGHQAGDQLLVEVARRLSGCVRSMDTVARLGGDEFAVILEEFKTKKEVM 495 Query: 420 ALDSHL---KQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPE 476 + + F G + P+ + Y +L A++++ + Sbjct: 496 TVVERIGVGLGKPFVLCGKTVTPEASIGIVLHTRD----YAAADDLLRDADIAMYRAKEQ 551 Query: 477 NMQR-RGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKG 533 + +E+ + +++ L+QALE L QPI ++ V E L+R Sbjct: 552 GRASMIFDRKMHQEILEAISLETDLRQALEAGELLLHYQPIVDVKDSRIVGFEALVRWDH 611 Query: 534 ENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMP---AHRFAINLSPTSV 590 + L+ P F+P+A E GL + +VI+ + + + +MP ++N+S Sbjct: 612 PDRGLVPPGQFIPLAEETGLILPLGRFVIDEACRQLRAWQLEMPEAADLSVSVNVSCRQF 671 Query: 591 CQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGT 650 + V+Q+LA + L E+TES + + + L L+ LG +IAIDDFGT Sbjct: 672 VKDGLVEHVAQVLAATGLPPACLKLEITESVLMHDAEHTARELNRLKALGVKIAIDDFGT 731 Query: 651 GYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEI 710 GY+S + L+ + D LKID SFI + +IV SI LAR + V+AE VE + Sbjct: 732 GYSSLSYLRQLPIDHLKIDRSFISGQGCDGESQEIVKSIISLARSLGLTVIAEGVECPDQ 791 Query: 711 REAVLSLGIDYMQGYLIGKPQ 731 + + D QG++ +P Sbjct: 792 LDRLRLADCDKAQGFMFSRPV 812 >UniRef50_Q2BQI6 Putative uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQI6_9GAMM Length = 955 Score = 522 bits (1346), Expect = e-146, Method: Composition-based stats. Identities = 114/512 (22%), Positives = 209/512 (40%), Gaps = 25/512 (4%) Query: 254 MMWGAMRYGYKLISLLWAVVL-----MISIHSYQNYIPIYPGYTTQLTITSSSYL-VFSF 307 + + ++ +W + + + IYP T I + Sbjct: 447 RILQSGKHDIAFYENMWEQIQKHGHWRGEVWNRAKSGTIYPEILTISAIDFKKGQQPSGY 506 Query: 308 IVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL--------RDAPWSALCYL 359 + + + T + R+ LA+ D + LPN L R A+ +L Sbjct: 507 VGVFADI--TSLKETEARLDHLAHYDALTELPNRLLFRERLIHSLLMSERKKTKVAVLFL 564 Query: 360 RIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESH-QERI 418 + + + G + +++ L ++ G+ V ++SG++ L L + + Sbjct: 565 DLDRFKNINDTLGHGVGDILLAEIASRLRHVVRMGDTVGRISGDEFCLILEDIQDVTDVV 624 Query: 419 TALDSHLKQFR--FFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPE 476 ++ L F + +Q + N LL ++ + A Sbjct: 625 PIVEKILSVFSQTIQINSHMLQISASIGVAISPDNSNDADALLSFSDSA--MYEAKEAGR 682 Query: 477 NMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMR--GDVYHEILLRMKGE 534 N + + ++ + + + L+ ALE + FF+ QP ++ V E L+R + Sbjct: 683 NTYKFYTAEMTQQALEHSFVQSALRDALEQSQFFVTYQPQLRIKDYSMVGVEALVRWQHP 742 Query: 535 NDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAEN-RAKMPAHRFAINLSPTSVCQA 593 LI PDSF+P+A GL + W++ + + ++ R +N+S T + Sbjct: 743 ERGLIPPDSFIPIAENSGLIRELGAWILRTACEQGVQWLNEQVNFGRIYVNVSATQLHDE 802 Query: 594 RFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYA 653 F V L + A +L EVTES + + + A L +E+G ++AIDDFGTGY+ Sbjct: 803 SFTEAVIMCLKETGFPAEKLGLEVTESFIMKDPQHAINVLSSFKEIGIELAIDDFGTGYS 862 Query: 654 SYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREA 713 S + LK + D LKID SFIR+I + D I ++ + + + V+AE VE++ + Sbjct: 863 SLSYLKQLPIDKLKIDQSFIRDIPDDPNDMAIAEAVIAMGKALNLEVIAEGVESQIQADF 922 Query: 714 VLSLGIDYMQGYLIGKPQPLIDTLNEIEPIRE 745 +L +QGYL P D +E E R+ Sbjct: 923 LLDKECTEVQGYLYAHPL-TADAFSEWEKQRD 953 >UniRef50_Q1NQ51 PAS:GGDEF:EAL n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NQ51_9DELT Length = 751 Score = 522 bits (1346), Expect = e-146, Method: Composition-based stats. Identities = 120/509 (23%), Positives = 212/509 (41%), Gaps = 35/509 (6%) Query: 254 MMWGAMRYGYKLISLLWAVVL-----MISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFI 308 + + R+ +W ++ I + + +YP + + ++ + ++ Sbjct: 248 RILKSDRHEQAFYQHMWRELIEKGQWRGEIWNRRKNGEVYPEWLSISGVSDARGQTSYYV 307 Query: 309 VNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL--------RDAPWSALCYLR 360 + + ++ + +++ LAY DP+ LPN L+ L R + ++ Sbjct: 308 GVFTDL--SQLKQSEAKLESLAYYDPLTALPNRLLLHSRLEHALEWAERHQTKVGVYFID 365 Query: 361 IPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITA 420 + ++ ++ Q +S L + + + G++ L + + T Sbjct: 366 LDQFRVVNESLSYQAGDQLLVMVSKRFLSCLRVDDTLARPGGDEFVLIQEALADPQEATE 425 Query: 421 LDSHL-----KQFRFFW-DGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNA 474 L + F+ + + IG++ +L AE ++ +A Sbjct: 426 TARELLASLDQPFQLDGGQEIYLGASIGITVFPGDG------TTPPDLLKNAEAAMY-HA 478 Query: 475 PENMQRRGAMY---LQRELKDKVAMMNRLQQALEHNHFFLMAQPI---TGMRGDVYHEIL 528 EN + R + Y + + ++ M L+QA+E+ L QP + E L Sbjct: 479 KENGRNRFSFYAEQMNADALARLQMEMALRQAVENRELLLYYQPQWQLADSPSVIGAEAL 538 Query: 529 LRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMP-AHRFAINLSP 587 +R + + ELI+PD F+P+A + GL +I WVI+ + + R + R A+N+S Sbjct: 539 IRWRNKEGELIAPDQFIPLAEKSGLIGAIGDWVIDEACRQLRIWRDQGKKQLRVAVNVSA 598 Query: 588 TSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDD 647 V+Q L K++I A E+TES + ++A L LG IA+DD Sbjct: 599 RQFRAGNLAEVVAQALRKHEIPAHCFELELTESILMEKPEEAAELLNRCAALGVGIALDD 658 Query: 648 FGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVEN 707 FGTGY+S A L +LKID SF+R++ S I SI LA + VVAE VE Sbjct: 659 FGTGYSSLAYLSRFPITVLKIDRSFVRDLNHRSEAALIADSIIALAHRMGLQVVAEGVET 718 Query: 708 EEIREAVLSLGIDYMQGYLIGKPQPLIDT 736 EE R + S G D QG+L P P Sbjct: 719 EEQRAYLQSRGCDLAQGFLFSPPLPAEQF 747 >UniRef50_B5JW24 PAS sensor diguanylate cyclase and phophodiesterase n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JW24_9GAMM Length = 796 Score = 522 bits (1346), Expect = e-146, Method: Composition-based stats. Identities = 109/467 (23%), Positives = 223/467 (47%), Gaps = 27/467 (5%) Query: 289 PGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL 348 P + + + V ++ + R + ++ A D + L N R L Sbjct: 331 PLWVRETARV-INGRHGENQVLIVSEDISEARQLSNQLSHQASHDALTGLVNRGEFERRL 389 Query: 349 RD--------APWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQL 400 R AL YL + +++ G + + ++L+ L + G+ + +L Sbjct: 390 RQLVERAHVDDSGHALLYLDLDQFKIINDTCGHVAGDELLRQLAGLLKHKVRKGDTLARL 449 Query: 401 SGNDLALRLNT---ESHQERITALDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYL 457 G++ + + E + + + F+FFW + + + + S Sbjct: 450 GGDEFGVLVENCTMEDAERLAQTMCDVVASFQFFWGVSSFRIGVSIGLASIASGSGDYAD 509 Query: 458 LLGELNTVAELSIVTNAPENMQRRGAMYLQRELK-----DKVAMMNRLQQALEHNHFFLM 512 ++ + ++ A + + R +Y + + + ++ +++++ LE + F L Sbjct: 510 IMSQADSACY-----AAKDLGRNRVHIYRENDAELARRFGEMQWVSKIESTLEQDRFELY 564 Query: 513 AQPITGMR----GDVYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQF 568 QPI + ++E+L+RM+ + ++ P SF+ A + L ID V+ TL++ Sbjct: 565 FQPIVPIDNTRLDGRHYEVLVRMRDVDGNIVPPASFMSAAERYNLMGRIDRKVVSQTLRW 624 Query: 569 MAENRAKMPAHRF-AINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVK 627 ++ + + ++NLS ++ F + L ++ ++ +L FEVTE+ A+ N+ Sbjct: 625 LSLHPDHLKNLSVCSVNLSGQTLMDDDFLEFIFDELKQWNVDPRKLCFEVTETAAIENLT 684 Query: 628 QAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVA 687 +A ++ L++ GC+ ++DDFG+G +S+A LKN+ D +KIDG F+R+IV + +DY +V Sbjct: 685 KASDFIRSLKDRGCKFSLDDFGSGLSSFAYLKNLPVDYIKIDGLFVRDIVKDPIDYSMVR 744 Query: 688 SICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLI 734 SI +A++ VAE+VE+E I A+ ++G+DY QGY I + QP+ Sbjct: 745 SINEIAQVMGKKTVAEFVEDELILNALRNIGVDYAQGYYISRDQPIS 791 >UniRef50_C5CTK8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Variovorax paradoxus S110 RepID=C5CTK8_VARPS Length = 1107 Score = 522 bits (1346), Expect = e-146, Method: Composition-based stats. Identities = 103/455 (22%), Positives = 184/455 (40%), Gaps = 16/455 (3%) Query: 298 TSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNV--------RALNRALR 349 + ++ +++ R ++ +A D + L N RA+ R+ R Sbjct: 639 IDAQTQESLRVIALQIAQYKQRKQAERSLRFMASHDGLTGLFNRAALQHELARAIKRSNR 698 Query: 350 DAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRL 409 A+ ++ + + + G + + + L+ LL + V + G++ L L Sbjct: 699 HQKQFAVIFVDLDRFKHINDTLGHGVGDEMIKICGERLTALLREADVVARFGGDEFVLLL 758 Query: 410 NTESHQERITALDSHLKQF---RFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVA 466 S L + FF G + V LL +T Sbjct: 759 ENLSSANDAAGLAEKVLACCAEPFFLAGRELHVSASVGVSIYPDNGADAEALLKNADTA- 817 Query: 467 ELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VY 524 + N R A + + +++ + + L+ ALE + QP ++ V Sbjct: 818 -MYRAKERGRNTFRFYAAKMNAQNTEQLMLESALRHALERGELEMHYQPKMDLQTQRIVG 876 Query: 525 HEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQF-MAENRAKMPAHRFAI 583 E L+R +I P F+P+A E GL S+ W +E + + +P ++ Sbjct: 877 VEALMRWHHPILGMIPPVQFIPIAEELGLIVSLGKWALERACADSRSWQKYGLPKVLMSV 936 Query: 584 NLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQI 643 NLSP ++ +L +E L E+TE + N + A L+ ++++G + Sbjct: 937 NLSPRQFESRTLIADIQAVLEASGLEPSLLELEITEGAVMANPEHAAKLLRAIRDMGVGL 996 Query: 644 AIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAE 703 AIDDFGTGY+S + LK+ +KID SFI ++ ++ ++ I LA +M VVAE Sbjct: 997 AIDDFGTGYSSLSYLKHFPLSTVKIDRSFINDLSQDADARALIDGIITLAHGLRMKVVAE 1056 Query: 704 YVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLN 738 +E + + S G D QGY + KP P + N Sbjct: 1057 GIETTAQLDYLRSHGCDEAQGYWLCKPVPADEVRN 1091 >UniRef50_B7GKR7 Multidomain signal transduction protein (Contains PAS, GGDEF and EAL domains) n=2 Tax=Bacillaceae RepID=B7GKR7_ANOFW Length = 594 Score = 522 bits (1345), Expect = e-146, Method: Composition-based stats. Identities = 115/499 (23%), Positives = 216/499 (43%), Gaps = 27/499 (5%) Query: 258 AMRYGYKLISLLWA-----VVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYM 312 + + K +W V I + + ++ + T + + ++ + Sbjct: 89 SGLHDRKFYENMWETIRDHGVWKGEIWNKRKNGELFVEWLTIKAVYDVAGNPTHYVAIFS 148 Query: 313 AVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRD--------APWSALCYLRIPGM 364 V T+ + + ++ RL+ D + ++PN + + L+ A+ +L + Sbjct: 149 DV--TQHKRTMEQLARLSNYDLLTNVPNRQLFTKRLQHLLDTARRYNQQLAILFLDLDRF 206 Query: 365 EMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESH-QERITALDS 423 + + G QK+++ L LL + + ++ G++ + L QE ++ + Sbjct: 207 KYINDELGHYSGDILLQKVANRLKKLLRTKDTLARIGGDEFVVILPKLKDIQEAVSIAEQ 266 Query: 424 HLK--QFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRR 481 ++ Q F + + + + +LL + + A E+ + R Sbjct: 267 IIESLQAPFLLHHKDIYISASIGISVYPNDGDDGEMLLRRADRA-----MQKAKESGRNR 321 Query: 482 GAMYLQR--ELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDVYH--EILLRMKGENDE 537 +Y + + V + N L++A+E N F+ QPI ++ E L+R K N Sbjct: 322 FELYTAKLDYQSEVVTLENYLRKAIERNELFVCYQPIVNIKTKKIEALEALMRWKQPNIG 381 Query: 538 LISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPV 597 +SP F+P+A E GL + W+ E + P + IN+S Q F Sbjct: 382 FVSPAQFIPLAEETGLIVPMTKWLFEQACVHIKAIHQFAPHVKIGINISAVHFQQDDFVQ 441 Query: 598 EVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYAR 657 ++S ++ K+ + E+TES + N +++ L L++ G ++AIDDFGTG++S + Sbjct: 442 QLSTIVKKHDVHPRFFKLELTESTIMPNAEESVQKLVQLKQCGFKLAIDDFGTGFSSLSY 501 Query: 658 LKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSL 717 L D+LKID SFIR + S D IV++I +A + VVAE VE E+ E + Sbjct: 502 LHRFPIDILKIDQSFIRRLSLYSDDATIVSTIIMMAHHLHLSVVAEGVETEQQYEFLNKQ 561 Query: 718 GIDYMQGYLIGKPQPLIDT 736 D QGY I KP P+ + Sbjct: 562 QCDMAQGYYIAKPMPIDEV 580 >UniRef50_C0ZBG1 Probable signaling protein YkoW n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBG1_BREBN Length = 805 Score = 522 bits (1345), Expect = e-146, Method: Composition-based stats. Identities = 118/460 (25%), Positives = 207/460 (45%), Gaps = 22/460 (4%) Query: 294 QLTITSSSYLVFSFIVNYMAVLA--TRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRDA 351 L +T + V I ++ T ++ +I LA+ D + LPN R + + L Sbjct: 340 HLNMTHTPVFVDQQITGVFMIVRDITNKKEYEAKINYLAFHDSLTGLPNRRFVEQQLDQV 399 Query: 352 PWSA--------LCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGN 403 A + +L + +++ + G Q+ S L + VY+L G+ Sbjct: 400 IMEAQKTDQQVYVLFLDLDHFKLVNDSLGHDFGDLLLQEASLRLRECVGKKGTVYRLGGD 459 Query: 404 DLALRLNTESHQER---ITALDSHLKQ-FRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLL 459 + + L + +E ++ ++Q F + + IG+S R P + + Sbjct: 460 EFMVILTDVTEREVSSMANEINETIEQAFFIHGHELYITTSIGIS----RYPEDGQDRSV 515 Query: 460 GELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGM 519 N A + + +N L++ + DK+ + N L +AL F L QP Sbjct: 516 LMRNADAAMYAAKDKGKNSFHLYVPNLEQAVNDKMNIQNELNRALARQEFLLHYQPQVSA 575 Query: 520 RGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAK-M 576 + V E L+R L+ PD F+ VA E GL I WV+ + + + + + Sbjct: 576 KSGAIVGVEALIRWDHPERGLLLPDQFISVAEETGLIVPIGEWVLRTACKQNKQWQDQGL 635 Query: 577 PAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHL 636 R A+NLS + F ++++L + ++ L E+TES+ + +V +A L+ L Sbjct: 636 KPLRVAVNLSARQFLKQDFTQMIAEILHQTRLAPEYLELEITESSMI-DVHRATQALKEL 694 Query: 637 QELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMK 696 ++LG +AIDDFGTGY+S LK + LKID SF+R+++ + IV++I +A Sbjct: 695 KQLGVHVAIDDFGTGYSSLYYLKEFPLNRLKIDRSFVRDMIEQPSNQAIVSTIISMAHHL 754 Query: 697 KMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDT 736 +M V+AE VE +E + + +QGYL +P P D Sbjct: 755 QMHVIAEGVETKEELAFLQEHLCEEVQGYLFSRPLPSEDV 794 >UniRef50_D1C8G6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C8G6_SPHTD Length = 760 Score = 522 bits (1345), Expect = e-146, Method: Composition-based stats. Identities = 105/457 (22%), Positives = 192/457 (42%), Gaps = 28/457 (6%) Query: 304 VFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL--------RDAPWSA 355 V ++N + + ++ + + AY DP+ LPN L R L R+ A Sbjct: 297 VGGIVINARDI--SERKRFEKELVHQAYHDPLTGLPNRVFLQRRLADSLAQAARERTRVA 354 Query: 356 LCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNT---- 411 L ++ + +++ + G + +L L + G+ + G++ + +N Sbjct: 355 LLFIDLDNFKLINDSLGHDAGDRVLSELGKRLLGCIRCGDMAARFGGDEFMVLINGTPGT 414 Query: 412 -ESHQERITALDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSI 470 + + + F + + IGV+ +L A+ ++ Sbjct: 415 DAALAAADRLAATLAEPFVVDGHELVITTSIGVALG------GDPDDRPEDLIRNADAAM 468 Query: 471 VTNA--PENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHE 526 + + + + +++A+ L+ LE F + QP+ +R V E Sbjct: 469 HRAKLLGKARRVVFDPAMYAQAVERLALERDLRHGLERGEFQIYYQPVLDVRTRRPVEVE 528 Query: 527 ILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHR---FAI 583 L+R LISP F+P+A E GL + WV+ + +A R P ++ Sbjct: 529 ALVRWHHPERGLISPGEFIPIAEETGLIVPLGHWVLAEACRQLAAWRTAFPDCAPSAVSV 588 Query: 584 NLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQI 643 NLS +++Q+LA+ + L E+TES + + L+ L++LG Q+ Sbjct: 589 NLSARQFRHPSLTADIAQILAETGLPPASLKLEITESVMMDDTASTLEALRDLKQLGVQL 648 Query: 644 AIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAE 703 A+DDFGTGY+S + LK D +KID SF R + + D +V ++ A ++ V E Sbjct: 649 AVDDFGTGYSSLSYLKRFPTDAMKIDRSFARGLDQSREDQALVEAMIAAANALRLQVTVE 708 Query: 704 YVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEI 740 VE EE E + +G D +QG+L P P + + Sbjct: 709 GVETEEQLEFLERVGCDLVQGFLFAPPMPPDEVARFL 745 >UniRef50_D1AZY7 Diguanylate cyclase n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1AZY7_SULD5 Length = 586 Score = 522 bits (1344), Expect = e-146, Method: Composition-based stats. Identities = 110/446 (24%), Positives = 192/446 (43%), Gaps = 21/446 (4%) Query: 310 NYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRA--------LRDAPWSALCYLRI 361 + + +R I LA+ DP+ HL N + L+ R AL + + Sbjct: 137 VILGKDISERRHAESTIHTLAFFDPLTHLANRQLLHDRMAQALAKSQRHHKVGALLMIDL 196 Query: 362 PGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITAL 421 + L G + + +++ + ++ G+ + ++SG++ + L +H+E A Sbjct: 197 DNFKALNDTKGHHIGDELLIQVAQRIQTIVREGDTLARISGDEFVVLLEGLAHEESKAAQ 256 Query: 422 DSH--------LKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTN 473 ++ L + G + LL + + + Sbjct: 257 EAEKFATRVKYLLNEPYELLGYEHTCSSSIGIALFNGQPKSKETLLKQADIA--MYQAKE 314 Query: 474 APENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDV-YHEILLRMK 532 N +Q ++ K M + L+ AL L QP + G + E LLR Sbjct: 315 KGRNRICFYDPLMQENIEHKTTMEHELRMALSKEELILFYQPQVNLEGKIVGVEALLRWN 374 Query: 533 GENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMP--AHRFAINLSPTSV 590 LI P++F+P+A E GL + WV+ Q ++E + P +IN+S Sbjct: 375 HPQKGLIPPNTFIPLAEETGLIIPVGSWVLHRACQQLSEWKKDFPHQPLHLSINVSAKQF 434 Query: 591 CQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGT 650 +A F V+ +A +A + E+TES L ++ + ++ L+ LG ++DDFGT Sbjct: 435 QEASFYETVANAIALSGSDAGSIKLELTESLILDSIHETIAKIEALRLLGVGFSLDDFGT 494 Query: 651 GYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEI 710 GY+S + LK + D LKID SF+R+I ++ D IV +I +A + V+AE VE++E Sbjct: 495 GYSSLSYLKRLPLDELKIDQSFVRDIGHDNNDAMIVKTIIEMAHNFDLDVIAEGVEDKEQ 554 Query: 711 REAVLSLGIDYMQGYLIGKPQPLIDT 736 ++ G QGYL GKP P + Sbjct: 555 FNFLMENGCGLFQGYLFGKPMPPEEL 580 >UniRef50_Q47H73 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47H73_DECAR Length = 585 Score = 522 bits (1344), Expect = e-146, Method: Composition-based stats. Identities = 115/475 (24%), Positives = 205/475 (43%), Gaps = 20/475 (4%) Query: 276 ISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVL-ATRQRAVVRRIQRLAYVDP 334 + H+Y+ G T + + S ++ + VL + Q+A +RI+ LA D Sbjct: 101 VLGHNYELTGLRKDGSTLPIMVLGSPSVIGGLPASVGTVLDISAQKAAEQRIRELADYDV 160 Query: 335 VVHLPNVRALNR--------ALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHW 386 + LPN R L A R+ A+ +L + + + + G + + +++ Sbjct: 161 LTGLPNRRLLRERFEQLLAAAEREKSEIAVIFLDLDHFKRVNDSLGHSVGDELLCEVARR 220 Query: 387 LSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLK----QFRFFWDGMPMQPQIG 442 L ++ + + +L G++ + + ++ F + + P +G Sbjct: 221 LDSVVRRIDTLARLGGDEFIFAMPGFHTAAAVEVARRLVEVFSRPFEVAGHELTVTPSLG 280 Query: 443 VSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQ 502 +S + LL +T + N + + + D++ M + L++ Sbjct: 281 ISI--YPHDGRDLETLLRNADTA--MYRAKEMGRNAFQFYSSEMNTTTLDRLLMESNLRR 336 Query: 503 ALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMW 560 AL N F L QP+ + + E L+R LI PD F+ VA E GL + I W Sbjct: 337 ALVQNEFILHYQPLVNLETGLIIGVEALIRWLHPELGLIMPDRFIHVAEETGLINPIGDW 396 Query: 561 VIEHTLQFMAEN-RAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTE 619 V+ + A +P A+N++P QA F V+ LA ++A +L E+TE Sbjct: 397 VLCEACRQAKAWCDAGLPPICMAVNVAPVQFRQAGFVEMVAGALATSGLDASRLELELTE 456 Query: 620 SNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSN 679 + + TL L +G ++++DDFGTGY+S A LK LKID SF+ ++ ++ Sbjct: 457 RTVMHDADINMGTLSALHRMGVELSLDDFGTGYSSLAYLKRFPVGKLKIDRSFVNDLETD 516 Query: 680 SLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLI 734 D+ I ++I + R +M V+AE VE E + +G D QGY +P Sbjct: 517 PDDWAIASTIVSMGRSLRMTVLAEGVEKVEQLALLRKMGCDMAQGYYFSRPMSAD 571 >UniRef50_B7KGZ9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KGZ9_CYAP7 Length = 897 Score = 522 bits (1344), Expect = e-146, Method: Composition-based stats. Identities = 107/452 (23%), Positives = 199/452 (44%), Gaps = 21/452 (4%) Query: 304 VFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRDA---------PWS 354 V ++N+ + T+++ +++ A D + LPN L L A Sbjct: 441 VEGIVLNFHEI--TQRKLAEAQLRHDALHDSLTGLPNRALLMDRLTQAINREKGRFYTHF 498 Query: 355 ALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESH 414 A+ +L + ++L + G ++ Q ++ L + + + +L G++ + L S Sbjct: 499 AVLFLDVDRFKLLNDSLGHLVGDQLLISFANCLKKIRRFTDTIARLGGDEFVILLEDLSE 558 Query: 415 QERITALDSHLKQF---RFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIV 471 + + + + F D + + + S H +L + +T + Sbjct: 559 VGQAIKVAQRINEILSSSFLIDDQEIFITASIGIAFSNSSYEHPSQILRDADTA--MYYA 616 Query: 472 TNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILL 529 N + + ++ + N L++A+E + + QPI ++ + E L+ Sbjct: 617 KNNGRGKYQVFDSSMHIHALKQLQLENDLRRAIERDELVVYYQPIICLKNGTLIGVEALV 676 Query: 530 RMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHR---FAINLS 586 R + + +ISP F+P+A E GL +D WV+ Q M + K + ++NLS Sbjct: 677 RWQHPQEGMISPAEFIPIAEETGLIIELDQWVLNTACQQMRFWQEKYSDFKSITLSVNLS 736 Query: 587 PTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAID 646 Q + +L + ++E L E+TE+ + N A L+ L E + +D Sbjct: 737 GRQFSQPDLIKNIDNILTQNKLEKQYLKLEITETVLIENPNSAAEMLEQLIERKVTVCLD 796 Query: 647 DFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVE 706 DFGTGY+S L D+LKID SF+ NI +N+ + I+ +I LAR ++ V+AE +E Sbjct: 797 DFGTGYSSLGYLHRFPLDVLKIDRSFVSNIETNTSNSTIIRTIITLARELEIEVIAEGIE 856 Query: 707 NEEIREAVLSLGIDYMQGYLIGKPQPLIDTLN 738 E+ RE + SLG Y QGY P + ++ Sbjct: 857 TEQQREFLQSLGCHYGQGYWFSPPVDGRELIS 888 >UniRef50_C6MBX5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MBX5_9PROT Length = 891 Score = 522 bits (1344), Expect = e-146, Method: Composition-based stats. Identities = 109/433 (25%), Positives = 191/433 (44%), Gaps = 20/433 (4%) Query: 320 RAVVRRIQRLAYVDPVVHLPNVRALNRALRD--------APWSALCYLRIPGMEMLVKNY 371 + +RI +A D + LPN L + A+ ++ + + + + Sbjct: 442 KEAEKRIIEMATHDALTGLPNRYLLRDRIEQVLVHDTRLQRQMAVLFIDLDHFKTINDSL 501 Query: 372 GIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLK----- 426 G + + ++ L + + V + G++ + LN+ + + + Sbjct: 502 GHEIGDLLLKAVADRLKSCVRNEDTVARQGGDEFIVVLNSIAESLDAAKVAQKILDSFAL 561 Query: 427 QFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYL 486 F + + + IG++ + VN LL N+ + N + L Sbjct: 562 PFHIHKNELHIDGSIGIA-VFPDDGVNAETLLK---NSDVAMYHAKKNGRNNYQFFTDEL 617 Query: 487 QRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDVYH--EILLRMKGENDELISPDSF 544 + ++ + L+ ALE N L QP+ M + E LLR + +LI+PD F Sbjct: 618 NKSAYERHILGLDLRYALERNELLLYYQPVMDMPSHNLYGVEALLRWRHPEQKLITPDKF 677 Query: 545 LPVAHEFGLSSSIDMWVIEHTL-QFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLL 603 + +A E GL I WVI Q A R AINLS +S++L Sbjct: 678 INLAEETGLIIPIGEWVIRTVCLQIKAWQEQGFYVPRVAINLSARQFRDKDLIKNISRIL 737 Query: 604 AKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNA 663 ++ ++A + E+TES + N+++ TL L +G I+IDDFGTGY+S + LK Sbjct: 738 SETGVKAKHIALEITESMLIDNIEKVVETLNRLDAMGLHISIDDFGTGYSSLSYLKQFPI 797 Query: 664 DLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQ 723 LKID SF+R++V++ D IVA+I +A +M V+AE +E EE + +++ ++ Q Sbjct: 798 HTLKIDRSFVRDLVTDKNDRTIVAAIIAMAHSLEMEVIAEGIEIEEQLDFLVTQKCNHYQ 857 Query: 724 GYLIGKPQPLIDT 736 GY KP + + Sbjct: 858 GYYFSKPVTVSEI 870 >UniRef50_C0N6D2 Putative uncharacterized protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N6D2_9GAMM Length = 1203 Score = 521 bits (1343), Expect = e-146, Method: Composition-based stats. Identities = 121/505 (23%), Positives = 229/505 (45%), Gaps = 32/505 (6%) Query: 255 MWGAMRYGYKLISLLWAVVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAV 314 +W +R G L + +Y + +S F+ + + Sbjct: 713 IWQTIRRGDDWRGEL---------QYRKKNGDLYWAQELIAPMLNSEGHATHFVATQIDI 763 Query: 315 LATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALR--------DAPWSALCYLRIPGMEM 366 T R + A D + L N + L + ALC+L + ++ Sbjct: 764 --TEARRLSEETSYQATHDQLTGLINRHEFDLRLERVVLAAKHNLTEHALCFLDLDQFKL 821 Query: 367 LVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITA---LDS 423 + G + + +++ L + + + +L G++ A+ + S A + Sbjct: 822 VNDTCGHIAGDELLRQIGSLLQSNVRSRDTIARLGGDEFAVLMEHCSIDRAYKACEQILQ 881 Query: 424 HLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENM---QR 480 L+ FRF W + + L ++T + +A N R Sbjct: 882 LLQDFRFHWQDYTFTVGGSIGLAIIDQHTRDSNEALKHVDTACYSA--KDAGRNRVEVHR 939 Query: 481 RGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGM---RGDVYHEILLRMKGENDE 537 ++ L++ + ++ + AL+ + F L AQPI + + +E+L+RM ++ E Sbjct: 940 EDSLRLKQR-RGEIHWSTEINDALDDDRFLLYAQPIQPVMNPERGMSYEVLVRMLRKDGE 998 Query: 538 LISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAH-RFAINLSPTSVCQARFP 596 + P +FLP A + + ID WV+ HT ++ +N AK+ +INLS S+ Sbjct: 999 ISPPGAFLPAAERYNSINRIDRWVVSHTFDWLNKNAAKLNKVATVSINLSGLSMGDESML 1058 Query: 597 VEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYA 656 + + L +I A ++ FE+TE+ A+ N++ A ++ L+E G ++DDFG+G +S+A Sbjct: 1059 TFIIEQLETAKIPAEKIKFEITETAAIANLRAATKFIETLRESGIHFSLDDFGSGLSSFA 1118 Query: 657 RLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLS 716 LK + D LKIDG F+++++ + LD+++V SI + + + +AE+VE+E I + Sbjct: 1119 YLKKLKVDSLKIDGMFVKDMLIDPLDFEMVKSINEIGHVMGLETIAEFVESEAILAKLSE 1178 Query: 717 LGIDYMQGYLIGKPQPLIDTLNEIE 741 +G+D++QGY IGKP P+ D LN + Sbjct: 1179 IGVDFVQGYAIGKPAPIDDILNGLS 1203 >UniRef50_C7RK65 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RK65_9PROT Length = 1327 Score = 521 bits (1343), Expect = e-146, Method: Composition-based stats. Identities = 104/502 (20%), Positives = 195/502 (38%), Gaps = 23/502 (4%) Query: 254 MMWGAMRYGYKLISLLWAVV-----LMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFI 308 M + + +W + + + + + T + + V ++ Sbjct: 823 RMLQSGFQDRRFYLDMWQALGTQGRWRGELWNRRKDGQTFLESLTISAVKDAQGKVAHYV 882 Query: 309 VNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNV--------RALNRALRDAPWSALCYLR 360 + + T R ++ A+ DP+ LPN +AL RA RD A+ ++ Sbjct: 883 GVFSDI--TELRRAHDQLDHQAHHDPLTGLPNRLLLGDRLHKALQRAHRDETGLAVFFID 940 Query: 361 IPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITA 420 + + + G + + +++ L L+ + V +L G++ + + ++ Sbjct: 941 LDRFKNINDTLGHQVGDRVLCEVAWRLGRLMRESDTVGRLGGDEFLIVIEDVGEPTAVSH 1000 Query: 421 LDSHLK---QFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPEN 477 + + Q + L+ + + N Sbjct: 1001 IAEKILNVLQASPVTVEHEFFVGASIGISVFPQDGADAETLMKNADVA--MYRAKERGRN 1058 Query: 478 MQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGEN 535 L + ++ M L++A+E + QP + V E L+R Sbjct: 1059 TYEFFTKDLTQTSLARLQMETDLRRAIERGELRVYLQPQFSLATGKVVGAEALVRWLRPQ 1118 Query: 536 DELISPDSFLPVAHEFGLSSSIDMWVI-EHTLQFMAENRAKMPAHRFAINLSPTSVCQAR 594 L+ P F+ +A E GL I WV Q+ A + ++N+S + R Sbjct: 1119 QGLVLPGEFIKLAEESGLIVPIGEWVQGTAACQWATWVAAGLAPGVLSVNVSGVEFARGR 1178 Query: 595 FPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYAS 654 + L + A L E+TES +++ + + L +L+ +G + IDDFGTGY+S Sbjct: 1179 IQQTARRTLELSGLPARFLELEITESAIMSHAENSVQVLDNLRAMGISLVIDDFGTGYSS 1238 Query: 655 YARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAV 714 A LK + + LK+D SF+R + +++ D I ++ L ++ V+AE VE E RE + Sbjct: 1239 LAYLKRLPLNKLKVDQSFVRGLPNDTEDCAIARAVIALGHSLQLTVIAEGVETEAQREFL 1298 Query: 715 LSLGIDYMQGYLIGKPQPLIDT 736 G D MQGYL G+P P D Sbjct: 1299 TGEGCDEMQGYLRGRPMPFDDY 1320 >UniRef50_Q1JX80 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JX80_DESAC Length = 678 Score = 521 bits (1342), Expect = e-146, Method: Composition-based stats. Identities = 106/478 (22%), Positives = 190/478 (39%), Gaps = 18/478 (3%) Query: 273 VLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYV 332 ++ + ++ + ++ + + TR++ RI+ LAY Sbjct: 197 SIVCEKRYIRKDGSVFWAQLSSTWFFDANGNPLYTVPVIQDI--TRRKEAEERIRELAYY 254 Query: 333 DPVVHLPNVRALNRAL--------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLS 384 D + L N N L R AL +L + + + G + ++ + Sbjct: 255 DSLTGLANRTLFNDRLDQVMARSRRRQSRFALMFLDLDRFKGVNDTLGHAVGDAMLRQAA 314 Query: 385 HWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLKQF---RFFWDGMPMQPQI 441 L+ L + V +L G++ + L+ + + + + F + Sbjct: 315 ERLNECLRENDTVARLGGDEFVIILSDYKEDANLPRVADKILKALSSPFDLGVREVYSST 374 Query: 442 GVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQ 501 V + LL + + + + R + + ++ M L+ Sbjct: 375 SVGIAIYPDDGDEATDLLRHADMA--MYAAKESGGDTFRFYSSEMNARAVSRMDMEANLR 432 Query: 502 QALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDM 559 +ALE FF+ QP + + E LLR + +I P F+ +A E L + Sbjct: 433 RALEQEEFFIEYQPQIDLITNKVAGVEALLRWQHPQLGVIPPTQFIGLAEETNLILPLGE 492 Query: 560 WVIEHTLQFMAEN-RAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVT 618 WV+ + + R IN+S Q F V +LL + L FE+T Sbjct: 493 WVMRRVFEQCVMWKQEGYLPFRVGINVSGRQFVQPDFVDMVCRLLDETGAAPELLEFEIT 552 Query: 619 ESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVS 678 ES + +V A +TL+ L++LG +AIDDFGTGY+S + LK++ + LKID SFI ++ Sbjct: 553 ESVVMKDVDAAVLTLEALKKLGINMAIDDFGTGYSSLSCLKHLPLNRLKIDKSFISDLQD 612 Query: 679 NSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDT 736 N+ D IV + +A+ ++ V AE VE E V D +QG+ +P + Sbjct: 613 NADDRAIVEATIAMAKRLELGVTAEGVETEGQYGFVQKRECDEVQGFYFSRPLSPSEV 670 >UniRef50_A0LA87 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LA87_MAGSM Length = 1070 Score = 521 bits (1342), Expect = e-146, Method: Composition-based stats. Identities = 122/500 (24%), Positives = 216/500 (43%), Gaps = 23/500 (4%) Query: 261 YGYKLISLLWAVVLM-----ISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVL 315 G S +W +L + + +YP + T + + F+ ++ + Sbjct: 556 QGEAFYSRIWQSLLQEGRWSGEVWERRKNGELYPKWMTMRRMLNQYGETAFFVGVFVDIS 615 Query: 316 ATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRDAPWSA--------LCYLRIPGMEML 367 Q+A +++RLAY DP+ LPN + L + +A + L + +++ Sbjct: 616 T--QKATEEQMERLAYYDPLTKLPNRALFHERLTQSITTAKRYKRHVGVVMLDLNRFKLI 673 Query: 368 VKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERIT-ALDSHLK 426 ++YG + +++ + L + V ++ + A+ L + IT ++ LK Sbjct: 674 NESYGYGVGDGLLIQVAERIVERLRESDIVARIGADTFAITLVDLKQEGEITGVANNLLK 733 Query: 427 QF--RFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAM 484 QF F +G + + + + LL + L N R + Sbjct: 734 QFVMPFLVNGHELMLRTAMGIVLYPTDGQDAETLLRHVENA--LGQAKQQGVNNYRFYSE 791 Query: 485 YLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDV--YHEILLRMKGENDELISPD 542 + ++A+ + ALE F L QP ++ V E L+R + + +ISP Sbjct: 792 EMSNISNKRLALEQEMHTALEQRDFVLYYQPKVNLQRGVVSGVESLIRWQHKQKGMISPV 851 Query: 543 SFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKM-PAHRFAINLSPTSVCQARFPVEVSQ 601 F+PVA E GL + +W++E + A+NLS +S+ Sbjct: 852 EFIPVAEETGLIVPMGLWILETACAEAKRITDYLGQPFTVAVNLSARQFQSRNLLESISE 911 Query: 602 LLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNV 661 L I+ L FE+TES + NV+++ TL ++ +G +AIDDFGTGY+S + LK Sbjct: 912 TLNNSAIDPSMLEFEITESMMMGNVEKSIETLVAIRNMGVTLAIDDFGTGYSSLSYLKRF 971 Query: 662 NADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDY 721 + LKID SFIR++ +S D IV++I +A+ + VVAE E E + G + Sbjct: 972 PINTLKIDQSFIRDLGVDSDDAAIVSAIISMAQDLNLHVVAEGAEKAEQVLFLKERGCET 1031 Query: 722 MQGYLIGKPQPLIDTLNEIE 741 +QGY +P P D ++ Sbjct: 1032 VQGYYFSRPLPQTDLERLLK 1051 >UniRef50_A7K0U5 Sensory box/GGDEF family protein n=14 Tax=Vibrio RepID=A7K0U5_VIBSE Length = 815 Score = 521 bits (1342), Expect = e-146, Method: Composition-based stats. Identities = 124/505 (24%), Positives = 210/505 (41%), Gaps = 24/505 (4%) Query: 254 MMWGAMRYGYKLISLLWAVVLMISIH-----SYQNYIPIYPGYTTQLTITSSSYLVFSFI 308 + + + LW + + + IYP T + + ++I Sbjct: 315 RILRSGHHDQGFYKQLWHQLETKGQWKGEFINRKKDGSIYPQLATISAVMDDKNHLINYI 374 Query: 309 VNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRDA--------PWSALCYLR 360 + + ++A ++QR+A+ DP+ +LPN L L A +L Sbjct: 375 CVFEDISV--RKAHEEKLQRMAFYDPLTNLPNRTHLLSLLEQHIETGHKNQQTFATLFLD 432 Query: 361 IPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTE-SHQERIT 419 I + + + G Q KL+ L +L V ++ G++ + L S + Sbjct: 433 IDHFKHINDSMGHFCGDQLLSKLAIRLQDILHLNAHVARIGGDEFVIILPDVHSDVALLE 492 Query: 420 ALDSHLKQFRFFWD---GMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPE 476 + L F+ +D ++ + LL +T + + Sbjct: 493 TVGDILSVFQQPFDLANHDSLRVSTSIGIALYPRDGQDSETLLKNADTA--MYLAKKNGR 550 Query: 477 NMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGM--RGDVYHEILLRMKGE 534 N + L + V + + L QA+E L QP + V E LLR + Sbjct: 551 NGYAFYSPDLTDKSVSHVRIQSALHQAIEKQQLRLEFQPQYNLEQHAIVGVETLLRWQHP 610 Query: 535 NDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFM-AENRAKMPAHRFAINLSPTSVCQA 593 L+ P F+P+A + GL SI WV+ H Q A + R A+N+S + Q+ Sbjct: 611 EFGLVPPADFIPIAEKTGLIQSIGEWVLLHACQQGNAWLEQGVEFGRIAVNVSALQLQQS 670 Query: 594 RFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYA 653 F +S +L + A +L E+TES L + +QA +L L+ELG +I++DDFGTGY+ Sbjct: 671 NFIQRLSDILNQTGFPAQRLDLEITESFLLIDPQQAIASLNQLRELGIEISLDDFGTGYS 730 Query: 654 SYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREA 713 S + LK + + LKID SF+ ++ SNS IV +I + + + VVAE +E +E + Sbjct: 731 SLSYLKGLPINKLKIDRSFVSDVPSNSDSNAIVNAIIAMGKTLSLKVVAEGIETQEQADY 790 Query: 714 VLSLGIDYMQGYLIGKPQPLIDTLN 738 + G Y QGYL +P Sbjct: 791 LFEKGCVYGQGYLFSRPVSAEKLFR 815 >UniRef50_Q2Y6N3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y6N3_NITMU Length = 1025 Score = 521 bits (1342), Expect = e-146, Method: Composition-based stats. Identities = 115/452 (25%), Positives = 187/452 (41%), Gaps = 17/452 (3%) Query: 297 ITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRDAPWSA- 355 TSSS + N +A A ++ R+ LA DP+ LPN LR A A Sbjct: 555 FTSSSINFLQSLANILA-TAIDRKTTEERLTYLAQFDPLTELPNRSLFLDRLRQAMEHAH 613 Query: 356 -------LCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALR 408 + + + +++ G + ++ L + + V +L G++ AL Sbjct: 614 RNRRRVGVVFADLDRFKIVNDTMGHSTGDELLIHVAKRLQQCVRSCDTVARLGGDEFALI 673 Query: 409 LNTESHQERITALDSHL---KQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTV 465 L+ E T + + Q F + + + LL +T Sbjct: 674 LSDLVQPEDATLIAEKVISALQVPFELETQEIYVSASLGISIYPGDGTDADSLLRNADTA 733 Query: 466 AELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--V 523 + + + + ++ + +L+ AL F L QP + Sbjct: 734 --MFQAKEQGPAIYQFYLPQMNERAVARLKIETQLRGALARREFVLHYQPKASLINGEIT 791 Query: 524 YHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENR-AKMPAHRFA 582 E LLR + L+ P F+ V + GL ++ WV++ + + E + + H A Sbjct: 792 GFEALLRWQHPAHGLVPPLQFISVLEDTGLIVAVGEWVVKTVCEQIREWQGQGLVLHPIA 851 Query: 583 INLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQ 642 INLS Q + + L I+ L FE+TES + + A LQ+L+ G Q Sbjct: 852 INLSARQFQQQDLDSIIGETLRATNIDPRLLEFELTESVLMKEAEMAANALQNLKAFGVQ 911 Query: 643 IAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVA 702 I++DDFGTGY+S A LK D+LKID +FIR++ ++ D I ++ LA + VVA Sbjct: 912 ISMDDFGTGYSSLAYLKRFPLDVLKIDRAFIRDVTTDPDDATITVAMIKLAHSLGLKVVA 971 Query: 703 EYVENEEIREAVLSLGIDYMQGYLIGKPQPLI 734 E VE E ++ G D MQGY +P PL Sbjct: 972 EGVETRAQLEFLIRHGCDEMQGYYFSQPLPLE 1003 >UniRef50_A1TZQ7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Gammaproteobacteria RepID=A1TZQ7_MARAV Length = 819 Score = 520 bits (1341), Expect = e-146, Method: Composition-based stats. Identities = 109/502 (21%), Positives = 211/502 (42%), Gaps = 23/502 (4%) Query: 255 MWGAMRYGYKLISLLWAVVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAV 314 +W ++R + + +W ++S + Y I ++ +++ + Sbjct: 320 LWKSIRLQVQRVG-VWQGE----VNSTRKNGERYWEQLVVTPIKDNNGESTGYLI--LGE 372 Query: 315 LATRQRAVVRRIQRLAYVDPVVHLPNVR--------ALNRALRDAPWSALCYLRIPGMEM 366 + ++ +++ R A D + LPN AL +A RD + +L + + Sbjct: 373 DISIRKRYEQQLLRQANYDILTGLPNRMLALDRLKLALAQARRDESKVGVMFLDLDNFKH 432 Query: 367 LVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLK 426 + G + + +S L V +L G++ + L + + + + + Sbjct: 433 INDTLGHDAGDTLLIEAARRISSCLRGTSTVARLGGDEFLVVLPGLNGPDASSQVAERIL 492 Query: 427 Q---FRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGA 483 + F G + + ++ LL + A + + ++ R Sbjct: 493 KTFAPPFMLSGQEVFVTTSIGIATFPDDSDNSGTLLQHAD--AAMYEAKHKGKSAYARFT 550 Query: 484 MYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISP 541 + +++ M + +++ALE F L QPI V E LLR ++ P Sbjct: 551 PEMSEVSHERLQMESHMRKALELGEFELYFQPIVDTASGGLVAAEALLRWNNPAMGMVMP 610 Query: 542 DSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRA-KMPAHRFAINLSPTSVCQARFPVEVS 600 D F+P+A E GL I WV++ Q +A A+N+SP F + Sbjct: 611 DRFIPLAEETGLIIPIGEWVVKEACQAAYCWQAMTGREISIAVNVSPRQFRDPGFTDAIM 670 Query: 601 QLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKN 660 + L + L E+TE L N + L+ L ++G ++++DDFGTGY++ + LK+ Sbjct: 671 RALNDSNLRPELLELEITERLILDNSIETADILKQLDKVGIRLSVDDFGTGYSALSYLKS 730 Query: 661 VNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGID 720 D LKID SF+++++ + D +V +I ++A + VVAE VE E++ + + D Sbjct: 731 YPFDTLKIDKSFVQDVLKENEDASLVRAIINMAHSLGLKVVAEGVEEEDLTHFLKAEHCD 790 Query: 721 YMQGYLIGKPQPLIDTLNEIEP 742 Y QGY +P P D ++ +E Sbjct: 791 YSQGYFYSRPLPEQDFIHWLET 812 >UniRef50_Q1JXC9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXC9_DESAC Length = 888 Score = 520 bits (1341), Expect = e-146, Method: Composition-based stats. Identities = 107/441 (24%), Positives = 194/441 (43%), Gaps = 16/441 (3%) Query: 314 VLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRDAPWSA--------LCYLRIPGME 365 + R R ++ L Y D + LPN + L+ A A + ++ + + Sbjct: 444 ISEQRLRDNEDHLEYLVYHDVLTDLPNRQLFRDRLQHAISMASLGQHQVGVLFIDLDHFK 503 Query: 366 MLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHL 425 + + G + + +++ L + + V +LSG++ A+ L+ ++ E + + + Sbjct: 504 KINDSLGHEVGDRLLCEVARRLRLCIGGLDTVARLSGDEFAIILDQLNNIENVILIAQEV 563 Query: 426 KQ---FRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRG 482 + +G + + + LL + A + + R Sbjct: 564 NRRLAEMMVVEGYKLFLTASIGISLYPGDGKDVVSLLKCAD--AAMFKAKELGRDNYRFY 621 Query: 483 AMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELIS 540 L + +A+ L+QA++ NH + QP + + E L+R + + +IS Sbjct: 622 TAGLNERASELLALEGALRQAVDKNHLVVYFQPQVELASRRIIGAEALVRWQHPENGMIS 681 Query: 541 PDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENR-AKMPAHRFAINLSPTSVCQARFPVEV 599 P F+P+A E GL SI WV+ + + + A P R ++N+S Q V Sbjct: 682 PVDFIPMAEETGLIVSIGEWVLRQSCLQARQWQVAGYPPMRISVNMSARQFRQKDLVPMV 741 Query: 600 SQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLK 659 ++L + + L E+TES + +V A L L LG Q++IDDFGTGY+S A LK Sbjct: 742 RRILQETGLSPEYLDLEITESILMNDVDGAVERLVELHSLGIQLSIDDFGTGYSSLAYLK 801 Query: 660 NVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGI 719 LKID SF+R+++ + D I ++ LAR + V+AE +E ++ + +L G Sbjct: 802 KFPIQYLKIDRSFVRDVIIDPNDAAIATAVIDLARNMNLNVIAEGIEQQDQHQFLLDRGC 861 Query: 720 DYMQGYLIGKPQPLIDTLNEI 740 Y QGYL +P P + + Sbjct: 862 GYGQGYLFSRPIPAHEFEQLL 882 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q47GC0 Diguanylate cyclase/phosphodiesterase with PAS/P... 777 0.0 UniRef50_C5V3L4 Diguanylate cyclase/phosphodiesterase with PAS/P... 775 0.0 UniRef50_P77172 Inner membrane protein yfgF n=114 Tax=Enterobact... 769 0.0 UniRef50_A1K3A1 GGEF/EAL/PAS/PAC-domain containing protein n=1 T... 763 0.0 UniRef50_Q2W807 Predicted signal transduction protein n=4 Tax=Ma... 762 0.0 UniRef50_C5S5K8 Response regulator receiver modulated diguanylat... 761 0.0 UniRef50_Q31GH8 Diguanylate cyclase/phosphodiesterase with PAS/P... 759 0.0 UniRef50_C6P1A0 Diguanylate cyclase/phosphodiesterase with PAS/P... 758 0.0 UniRef50_C5V1I4 Diguanylate cyclase/phosphodiesterase with PAS/P... 758 0.0 UniRef50_C6ME82 Response regulator receiver modulated diguanylat... 757 0.0 UniRef50_C5V1H2 Diguanylate cyclase/phosphodiesterase with PAS/P... 757 0.0 UniRef50_C7RJ77 Diguanylate cyclase/phosphodiesterase with PAS/P... 756 0.0 UniRef50_C6X6V4 Diguanylate cyclase/phosphodiesterase with PAS/P... 754 0.0 UniRef50_A1K4Z0 EAL/GGDEF/PAS/PAC-domain containing signalling p... 752 0.0 UniRef50_Q0AIX2 Diguanylate cyclase/phosphodiesterase with PAS/P... 751 0.0 UniRef50_B2T9B2 Diguanylate cyclase/phosphodiesterase with PAS/P... 750 0.0 UniRef50_Q39R25 Diguanylate cyclase/phosphodiesterase with PAS/P... 749 0.0 UniRef50_Q21SZ9 Diguanylate cyclase/phosphodiesterase with PAS/P... 749 0.0 UniRef50_C6NZE4 Diguanylate cyclase/phosphodiesterase with PAS/P... 747 0.0 UniRef50_C6P464 Diguanylate cyclase/phosphodiesterase with PAS/P... 747 0.0 UniRef50_A1SZA9 Diguanylate cyclase/phosphodiesterase with PAS/P... 746 0.0 UniRef50_C6NZ79 Diguanylate cyclase/phosphodiesterase with PAS/P... 745 0.0 UniRef50_C6MMM5 Response regulator receiver modulated diguanylat... 745 0.0 UniRef50_C7RNA9 Diguanylate cyclase/phosphodiesterase with PAS/P... 745 0.0 UniRef50_C3X2S2 Diguanylate cyclase/phosphodiesterase with PAS/P... 745 0.0 UniRef50_A0LKD9 Response regulator receiver modulated diguanylat... 744 0.0 UniRef50_Q5P5U6 Putative uncharacterized protein n=1 Tax=Aromato... 742 0.0 UniRef50_C1DBY5 Diguanylate cyclase/phosphodiesterase with PAS/P... 742 0.0 UniRef50_C5V5K2 Diguanylate cyclase/phosphodiesterase with PAS/P... 742 0.0 UniRef50_C6P1Q1 Diguanylate cyclase/phosphodiesterase with PAS/P... 742 0.0 UniRef50_Q47IA0 Diguanylate cyclase/phosphodiesterase with PAS/P... 741 0.0 UniRef50_B9YY70 Diguanylate cyclase/phosphodiesterase with PAS/P... 739 0.0 UniRef50_C4K931 Diguanylate cyclase/phosphodiesterase with PAS/P... 739 0.0 UniRef50_A0L8P4 Response regulator receiver modulated diguanylat... 737 0.0 UniRef50_C7RMB6 Diguanylate cyclase/phosphodiesterase with PAS/P... 737 0.0 UniRef50_Q5P4W8 Putative uncharacterized protein n=2 Tax=Proteob... 736 0.0 UniRef50_A1KAZ1 Hypothetical signaling protein n=1 Tax=Azoarcus ... 735 0.0 UniRef50_A0L8C6 Response regulator receiver modulated diguanylat... 734 0.0 UniRef50_C6NZD9 Diguanylate cyclase/phosphodiesterase with PAS/P... 733 0.0 UniRef50_C6P6N2 Diguanylate cyclase/phosphodiesterase with PAS/P... 731 0.0 UniRef50_Q21R50 Diguanylate cyclase/phosphodiesterase with PAS/P... 731 0.0 UniRef50_A0L9T5 Diguanylate cyclase/phosphodiesterase with PAS/P... 731 0.0 UniRef50_C6WTL1 Diguanylate cyclase/phosphodiesterase with PAS/P... 730 0.0 UniRef50_C5UZT1 Diguanylate cyclase/phosphodiesterase with PAS/P... 730 0.0 UniRef50_Q47BF2 Diguanylate cyclase/phosphodiesterase with PAS/P... 730 0.0 UniRef50_C7RS22 Diguanylate cyclase/phosphodiesterase with PAS/P... 730 0.0 UniRef50_Q478F7 Diguanylate cyclase/phosphodiesterase with PAS/P... 730 0.0 UniRef50_A5GBG4 Response regulator receiver modulated diguanylat... 730 0.0 UniRef50_A6SVJ0 Uncharacterized conserved protein n=4 Tax=Proteo... 729 0.0 UniRef50_A0L9S8 Diguanylate cyclase/phosphodiesterase with PAS/P... 727 0.0 UniRef50_C6WUG6 Diguanylate cyclase/phosphodiesterase with PAS/P... 727 0.0 UniRef50_C6P1Y8 Diguanylate cyclase/phosphodiesterase with PAS/P... 727 0.0 UniRef50_Q2W4Z4 Predicted signal transduction protein containing... 727 0.0 UniRef50_Q2RPL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rh... 727 0.0 UniRef50_C6P3H6 Diguanylate cyclase/phosphodiesterase with PAS/P... 726 0.0 UniRef50_Q7P0M4 Putative uncharacterized protein n=1 Tax=Chromob... 726 0.0 UniRef50_C5V7A4 Diguanylate cyclase/phosphodiesterase with PAS/P... 725 0.0 UniRef50_Q1JY96 Diguanylate cyclase/phosphodiesterase with PAS/P... 725 0.0 UniRef50_C5V280 Diguanylate cyclase/phosphodiesterase with PAS/P... 724 0.0 UniRef50_Q2W1Z2 Hypothetical 1041 kDa protein in hypE 3'region n... 722 0.0 UniRef50_Q2BR92 Putative uncharacterized protein n=1 Tax=Neptuni... 722 0.0 UniRef50_Q7NZ89 Putative uncharacterized protein n=1 Tax=Chromob... 721 0.0 UniRef50_Q3SIW6 Putative diguanylate cyclase/phosphodiesterase (... 721 0.0 UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/P... 721 0.0 UniRef50_A0LAF7 Diguanylate cyclase/phosphodiesterase with PAS/P... 721 0.0 UniRef50_Q3A4W5 Response regulator receiver modulated diguanylat... 721 0.0 UniRef50_B8DLV2 Diguanylate cyclase/phosphodiesterase with PAS/P... 720 0.0 UniRef50_A4J477 Diguanylate cyclase/phosphodiesterase with PAS/P... 719 0.0 UniRef50_Q3JAR2 Diguanylate cyclase/phosphodiesterase with PAS/P... 719 0.0 UniRef50_C5JAR6 Conserved uncharacterized protein n=1 Tax=uncult... 719 0.0 UniRef50_C7RK65 Diguanylate cyclase/phosphodiesterase with PAS/P... 719 0.0 UniRef50_A1K5Q6 GGDEF/EAL/PAC/PAS-domain containing protein n=1 ... 719 0.0 UniRef50_Q2W154 Putative uncharacterized protein n=2 Tax=Magneto... 718 0.0 UniRef50_C5D2J8 Diguanylate cyclase/phosphodiesterase with PAS/P... 718 0.0 UniRef50_Q608F9 Sensory box protein n=1 Tax=Methylococcus capsul... 716 0.0 UniRef50_B1XZA8 Diguanylate cyclase/phosphodiesterase with PAS/P... 716 0.0 UniRef50_Q1NQ51 PAS:GGDEF:EAL n=1 Tax=delta proteobacterium MLMS... 714 0.0 UniRef50_C6WZ79 Diguanylate cyclase/phosphodiesterase with PAS/P... 714 0.0 UniRef50_B9Z192 Diguanylate cyclase/phosphodiesterase with PAS/P... 714 0.0 UniRef50_C9P6X4 Diguanylate cyclase/phosphodiesterase with PAS/P... 713 0.0 UniRef50_Q1K2Z8 Diguanylate cyclase/phosphodiesterase with PAS/P... 712 0.0 UniRef50_B3E661 Diguanylate cyclase/phosphodiesterase with PAS/P... 712 0.0 UniRef50_C6WVK9 Diguanylate cyclase/phosphodiesterase with PAS/P... 712 0.0 UniRef50_A4G4R7 Putative uncharacterized protein n=1 Tax=Hermini... 712 0.0 UniRef50_Q21WS3 Diguanylate cyclase/phosphodiesterase with PAS/P... 711 0.0 UniRef50_C6P5X9 Diguanylate cyclase/phosphodiesterase with PAS/P... 711 0.0 UniRef50_A8FYM5 Signal transduction protein containing a membran... 711 0.0 UniRef50_A1STH5 Diguanylate cyclase/phosphodiesterase with PAS/P... 711 0.0 UniRef50_A1RPJ9 Diguanylate cyclase/phosphodiesterase with PAS/P... 710 0.0 UniRef50_B2JN77 Diguanylate cyclase/phosphodiesterase with PAS/P... 710 0.0 UniRef50_C4L987 Diguanylate cyclase/phosphodiesterase with PAS/P... 710 0.0 UniRef50_A1TX84 Response regulator receiver modulated diguanylat... 709 0.0 UniRef50_Q1NRJ4 PAS:GGDEF:EAL:GAF n=5 Tax=Deltaproteobacteria Re... 709 0.0 UniRef50_D1U882 Diguanylate cyclase/phosphodiesterase with PAS/P... 709 0.0 UniRef50_Q47A14 Diguanylate cyclase/phosphodiesterase with PAS/P... 708 0.0 UniRef50_Q47IR9 Diguanylate cyclase/phosphodiesterase with PAS/P... 708 0.0 UniRef50_A1ALY4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pe... 708 0.0 UniRef50_A1K5K2 Conserved hypothetical signaling protein n=2 Tax... 708 0.0 UniRef50_A6T1A8 Sensory box/GGDEF family protein n=1 Tax=Janthin... 707 0.0 UniRef50_B3EBJ5 Diguanylate cyclase/phosphodiesterase with PAS/P... 707 0.0 UniRef50_B4B341 Diguanylate cyclase/phosphodiesterase with PAS/P... 707 0.0 UniRef50_B7V0E6 Motility regulator n=25 Tax=Pseudomonas RepID=B7... 706 0.0 UniRef50_Q2BHU8 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesari... 706 0.0 UniRef50_Q5P4Q9 Putative uncharacterized protein n=1 Tax=Aromato... 706 0.0 UniRef50_C7RVM5 Response regulator receiver modulated diguanylat... 705 0.0 UniRef50_B9LZ98 Diguanylate cyclase/phosphodiesterase with PAS/P... 705 0.0 UniRef50_A0L2H7 Diguanylate cyclase/phosphodiesterase with PAS/P... 705 0.0 UniRef50_C6BWZ0 Diguanylate cyclase/phosphodiesterase with PAS/P... 704 0.0 UniRef50_C6X9G9 Diguanylate cyclase/phosphodiesterase with PAS/P... 703 0.0 UniRef50_C4L9X9 Diguanylate cyclase/phosphodiesterase with PAS/P... 702 0.0 UniRef50_B3PHI4 Sensory box/GGDEF family protein n=1 Tax=Cellvib... 702 0.0 UniRef50_Q2BQI6 Putative uncharacterized protein n=1 Tax=Neptuni... 701 0.0 UniRef50_Q1H367 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 700 0.0 UniRef50_Q2YCL1 Diguanylate cyclase/phosphodiesterase with PAS/P... 700 0.0 UniRef50_Q1GXZ6 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 700 0.0 UniRef50_Q88QU8 Sensory box protein n=22 Tax=Gammaproteobacteria... 699 0.0 UniRef50_B2JCW5 Diguanylate cyclase/phosphodiesterase with PAS/P... 699 0.0 UniRef50_A0LD38 Diguanylate cyclase/phosphodiesterase with PAS/P... 699 0.0 UniRef50_B3PCE8 Sensory box/GGDEF family protein n=2 Tax=Gammapr... 698 0.0 UniRef50_A6WKV6 Diguanylate cyclase/phosphodiesterase with PAS/P... 698 0.0 UniRef50_B9Z1R5 Diguanylate cyclase/phosphodiesterase with PAS/P... 697 0.0 UniRef50_Q21SH7 Diguanylate cyclase/phosphodiesterase with PAS/P... 697 0.0 UniRef50_A6T0F0 Sensory box/GGDEF family protein n=2 Tax=Oxaloba... 697 0.0 UniRef50_C0ZBT5 Probable signaling protein n=1 Tax=Brevibacillus... 696 0.0 UniRef50_C7LTY3 Diguanylate cyclase/phosphodiesterase with PAS/P... 696 0.0 UniRef50_C7RNY7 Diguanylate cyclase/phosphodiesterase with PAS/P... 696 0.0 UniRef50_Q3A1G1 Diguanylate cyclase/phosphodiesterase with PAS/P... 696 0.0 UniRef50_UPI0001C313CD diguanylate cyclase/phosphodiesterase wit... 695 0.0 UniRef50_C6XAD3 Diguanylate cyclase/phosphodiesterase with PAS/P... 695 0.0 UniRef50_Q20JY5 Sensory box/GGDEF family protein n=1 Tax=uncultu... 695 0.0 UniRef50_C5V0L7 Diguanylate cyclase/phosphodiesterase with PAS/P... 695 0.0 UniRef50_Q39X25 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ge... 695 0.0 UniRef50_A4Y0E0 Diguanylate cyclase/phosphodiesterase with PAS/P... 694 0.0 UniRef50_B3PKJ2 EAL domain protein n=1 Tax=Cellvibrio japonicus ... 694 0.0 UniRef50_Q47FU0 Diguanylate cyclase/phosphodiesterase with PAS/P... 693 0.0 UniRef50_A1ATC4 Periplasmic sensor diguanylate cyclase/phosphodi... 693 0.0 UniRef50_B1Y791 Diguanylate cyclase/phosphodiesterase with PAS/P... 693 0.0 UniRef50_C6P6Y2 Diguanylate cyclase/phosphodiesterase with PAS/P... 693 0.0 UniRef50_Q47ED8 Response regulator receiver modulated diguanylat... 692 0.0 UniRef50_B8GLY5 Diguanylate cyclase/phosphodiesterase with PAS/P... 692 0.0 UniRef50_B7KEH4 Diguanylate cyclase/phosphodiesterase with PAS/P... 692 0.0 UniRef50_B7GKR7 Multidomain signal transduction protein (Contain... 692 0.0 UniRef50_C6P3H7 Diguanylate cyclase/phosphodiesterase with PAS/P... 692 0.0 UniRef50_Q1PY13 Putative uncharacterized protein n=1 Tax=Candida... 691 0.0 UniRef50_C9YA12 Uncharacterized signaling protein PA1727 n=1 Tax... 691 0.0 UniRef50_C7RQ11 Response regulator receiver modulated diguanylat... 691 0.0 UniRef50_Q47X88 Sensory box sensor/GGDEF/EAL domain protein n=2 ... 691 0.0 UniRef50_C6NZZ7 Diguanylate cyclase/phosphodiesterase with PAS/P... 690 0.0 UniRef50_C5V2W0 Response regulator receiver modulated diguanylat... 690 0.0 UniRef50_Q47HF3 Response regulator receiver modulated diguanylat... 690 0.0 UniRef50_C6XCZ6 Diguanylate cyclase/phosphodiesterase with PAS/P... 690 0.0 UniRef50_Q479L8 Diguanylate cyclase/phosphodiesterase with PAS/P... 689 0.0 UniRef50_B8KF61 Ggef/eal/pas/pac-domain containing protein n=1 T... 689 0.0 UniRef50_Q21XK7 Response regulator receiver modulated diguanylat... 687 0.0 UniRef50_C0INC4 GGDEF family protein n=1 Tax=uncultured bacteriu... 687 0.0 UniRef50_Q47Y83 Sensory box sensor/GGDEF/EAL domain protein n=1 ... 687 0.0 UniRef50_Q1JX80 Diguanylate cyclase/phosphodiesterase with PAS/P... 687 0.0 UniRef50_A3DCG7 Diguanylate cyclase/phosphodiesterase with PAS/P... 686 0.0 UniRef50_Q607T2 Sensory box protein/GGDEF domain protein n=2 Tax... 685 0.0 UniRef50_A4G3M6 Putative two-component response regulator n=1 Ta... 685 0.0 UniRef50_Q5P4K8 Putative sensory box/GGDEF family protein n=1 Ta... 685 0.0 UniRef50_Q1LBF7 Diguanylate cyclase/phosphodiesterase with PAS/P... 685 0.0 UniRef50_Q12GF0 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 685 0.0 UniRef50_Q0ACK6 Diguanylate cyclase/phosphodiesterase with PAS/P... 685 0.0 UniRef50_Q7NYX4 Putative uncharacterized protein n=1 Tax=Chromob... 684 0.0 UniRef50_A4U4T7 Two-component sensory box protein n=3 Tax=Magnet... 684 0.0 UniRef50_Q2SF23 Predicted signal transduction protein containing... 684 0.0 UniRef50_A1KA22 GGDEF/EAL/PAS/PAC/GAF-domain containing protein ... 684 0.0 UniRef50_C0Z6C0 Probable signaling protein n=1 Tax=Brevibacillus... 682 0.0 UniRef50_C6CKZ2 Diguanylate cyclase/phosphodiesterase with PAS/P... 682 0.0 UniRef50_Q2BPN3 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 682 0.0 UniRef50_B1Y3M1 Diguanylate cyclase/phosphodiesterase with PAS/P... 682 0.0 UniRef50_C7RN47 Diguanylate cyclase/phosphodiesterase with PAS/P... 682 0.0 UniRef50_A7K0U5 Sensory box/GGDEF family protein n=14 Tax=Vibrio... 682 0.0 UniRef50_Q2SFI2 FOG: EAL domain n=1 Tax=Hahella chejuensis KCTC ... 682 0.0 UniRef50_C6X7I8 Response regulator receiver modulated diguanylat... 681 0.0 UniRef50_C9Y9D8 Putative uncharacterized protein n=1 Tax=Curviba... 681 0.0 UniRef50_B8GMU1 Diguanylate cyclase/phosphodiesterase with PAS/P... 680 0.0 UniRef50_A1TI51 Diguanylate cyclase/phosphodiesterase with PAS/P... 680 0.0 UniRef50_Q1K234 Diguanylate cyclase/phosphodiesterase with PAS/P... 679 0.0 UniRef50_C6MIL1 Diguanylate cyclase/phosphodiesterase with PAS/P... 679 0.0 UniRef50_C5V294 Diguanylate cyclase/phosphodiesterase with PAS/P... 678 0.0 UniRef50_Q2RRN9 Sensor protein n=3 Tax=Proteobacteria RepID=Q2RR... 678 0.0 UniRef50_D1T5E1 Diguanylate cyclase/phosphodiesterase with PAS/P... 677 0.0 UniRef50_B6AQA1 Diguanylate cyclase/phosphodiesterase n=2 Tax=Le... 677 0.0 UniRef50_Q3SK01 Putative diguanylate cyclase/phosphodiesterase (... 677 0.0 UniRef50_A4TX60 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswalden... 677 0.0 UniRef50_Q3A628 Diguanylate cyclase/phosphodiesterase with PAS/P... 677 0.0 UniRef50_A1WEV3 Diguanylate cyclase/phosphodiesterase with PAS/P... 676 0.0 UniRef50_B5E7Y8 Response regulator receiver modulated diguanylat... 676 0.0 UniRef50_B3E9L8 Diguanylate cyclase/phosphodiesterase with PAS/P... 676 0.0 UniRef50_A1TZQ7 Diguanylate cyclase/phosphodiesterase with PAS/P... 676 0.0 UniRef50_A0KRF8 Diguanylate cyclase/phosphodiesterase with PAS/P... 675 0.0 UniRef50_C5V4D8 Diguanylate cyclase/phosphodiesterase with PAS/P... 675 0.0 UniRef50_C5V122 Diguanylate cyclase/phosphodiesterase with PAS/P... 675 0.0 UniRef50_D0IUW1 Diguanylate cyclase/phosphodiesterase with n=3 T... 674 0.0 UniRef50_Q74A79 Sensory box/GGDEF family protein n=1 Tax=Geobact... 674 0.0 UniRef50_Q60BD0 Sensory box protein n=1 Tax=Methylococcus capsul... 673 0.0 UniRef50_C1DB08 Predicted signal transduction protein containing... 672 0.0 UniRef50_Q31NI4 Response regulator receiver modulated diguanylat... 672 0.0 UniRef50_C6XAG8 Diguanylate cyclase/phosphodiesterase with PAS/P... 672 0.0 UniRef50_P72843 Regulatory components of sensory transduction sy... 672 0.0 UniRef50_Q602I2 Sensory box protein/response regulator n=1 Tax=M... 672 0.0 UniRef50_A1K569 EAL/GGDEF/PAS/PAC-domain containing signalling p... 672 0.0 UniRef50_C6XBJ6 Diguanylate cyclase/phosphodiesterase with PAS/P... 672 0.0 UniRef50_A1ASK8 Response regulator receiver modulated diguanylat... 672 0.0 UniRef50_Q9I310 Uncharacterized signaling protein PA1727 n=74 Ta... 671 0.0 UniRef50_B9M6C9 Response regulator receiver modulated diguanylat... 671 0.0 UniRef50_Q47ES6 Diguanylate cyclase/phosphodiesterase with PAS/P... 671 0.0 UniRef50_C5T1I4 Diguanylate cyclase/phosphodiesterase with PAS/P... 671 0.0 UniRef50_Q2SFK1 FOG: EAL domain n=1 Tax=Hahella chejuensis KCTC ... 671 0.0 UniRef50_Q2BPB1 Regulatory component of sensory transduction sys... 671 0.0 UniRef50_Q087W4 Diguanylate cyclase/phosphodiesterase with PAS/P... 670 0.0 UniRef50_A1S1U8 Diguanylate cyclase/phosphodiesterase with PAS/P... 670 0.0 UniRef50_Q47AR1 Diguanylate cyclase/phosphodiesterase with PAS/P... 670 0.0 UniRef50_C5S8G6 Diguanylate cyclase/phosphodiesterase with PAS/P... 670 0.0 UniRef50_C4ZM30 Diguanylate cyclase/phosphodiesterase with PAS/P... 670 0.0 UniRef50_A0KIJ4 MorA n=2 Tax=Aeromonas RepID=A0KIJ4_AERHH 669 0.0 UniRef50_C6MBX5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ni... 669 0.0 UniRef50_Q39WZ5 Diguanylate cyclase/phosphodiesterase with PAS/P... 669 0.0 UniRef50_Q1K3I2 Diguanylate cyclase/phosphodiesterase with PAS/P... 669 0.0 UniRef50_B1XZW3 Diguanylate cyclase/phosphodiesterase with PAS/P... 669 0.0 UniRef50_Q39SC6 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 669 0.0 UniRef50_Q1H3Y9 Diguanylate cyclase/phosphodiesterase with PAS/P... 669 0.0 UniRef50_C6ML43 Response regulator receiver modulated diguanylat... 668 0.0 UniRef50_C4ZM39 Diguanylate cyclase/phosphodiesterase with PAS/P... 668 0.0 UniRef50_Q1H2A5 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 668 0.0 UniRef50_Q1JXC9 Diguanylate cyclase/phosphodiesterase with PAS/P... 668 0.0 UniRef50_A1K5S9 GGDEF/EAL-domain containing protein n=1 Tax=Azoa... 668 0.0 UniRef50_Q0A572 Diguanylate cyclase/phosphodiesterase with PAS/P... 668 0.0 UniRef50_C6CDP3 Diguanylate cyclase/phosphodiesterase with PAS/P... 668 0.0 UniRef50_C1DCZ4 Predicted signal transduction protein containing... 667 0.0 UniRef50_B7JWK6 Diguanylate cyclase/phosphodiesterase with PAS/P... 667 0.0 UniRef50_Q2W7U0 Predicted signal transduction protein containing... 667 0.0 UniRef50_D2XIQ4 Putative signal transduction protein n=1 Tax=unc... 667 0.0 UniRef50_Q2YAT8 Diguanylate cyclase/phosphodiesterase with PAS/P... 666 0.0 UniRef50_B9MBY4 Diguanylate cyclase/phosphodiesterase with PAS/P... 666 0.0 UniRef50_Q3A6S1 Diguanylate cyclase/phosphodiesterase with PAS/P... 665 0.0 UniRef50_A9D5G8 Sensory box protein n=1 Tax=Shewanella benthica ... 665 0.0 UniRef50_Q0F2A0 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 665 0.0 UniRef50_Q2BMA7 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesari... 665 0.0 UniRef50_B8GM77 Putative uncharacterized protein n=1 Tax=Thioalk... 665 0.0 UniRef50_Q221U3 Diguanylate cyclase/phosphodiesterase with PAS/P... 665 0.0 UniRef50_Q47H73 Diguanylate cyclase/phosphodiesterase with PAS/P... 665 0.0 UniRef50_A4ACX6 Sensory box/GGDEF/EAL family protein n=1 Tax=Con... 665 0.0 UniRef50_Q74FR9 Sensory box/GGDEF family protein n=1 Tax=Geobact... 664 0.0 UniRef50_B9ZJP5 Diguanylate cyclase/phosphodiesterase with PAS/P... 664 0.0 UniRef50_A6QAC3 Putative uncharacterized protein n=1 Tax=Sulfuro... 664 0.0 UniRef50_B8HWB1 Diguanylate cyclase/phosphodiesterase with FHA a... 664 0.0 Sequences not found previously or not previously below threshold: UniRef50_B5VXY3 Diguanylate cyclase/phosphodiesterase with PAS/P... 679 0.0 >UniRef50_Q47GC0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Betaproteobacteria RepID=Q47GC0_DECAR Length = 862 Score = 777 bits (2008), Expect = 0.0, Method: Composition-based stats. Identities = 121/529 (22%), Positives = 221/529 (41%), Gaps = 29/529 (5%) Query: 236 EKSTIFSTNYTL--SLLLPLMMWGAMRYGYKLISLLWAVV-----LMISIHSYQNYIPIY 288 ++ I +T Y+ ++ + + R+G +W + I + +Y Sbjct: 298 NRAFIETTGYSAEEAVGQTPRLLQSGRHGADFYREMWETIHRTGAWQGEIWGRRKNGEVY 357 Query: 289 PGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL 348 P + + + ++ V +I + + T ++ RI LA+ D + LPN L L Sbjct: 358 PKWLSISAVVGTNGRVSHYIGTHNDI--TERKKAEERINALAFFDQLTGLPNRTLLLDRL 415 Query: 349 --------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQL 400 R AL ++ + + L G + Q ++++ L+ + G+ V +L Sbjct: 416 KQTILSSGRSDSHGALLFIDLDNFKTLNDTLGHDVGDQLLKQVALRLTHCVRDGDTVARL 475 Query: 401 SGNDLALRLNTE-----SHQERITALDSHLKQ---FRFFWDGMPMQPQIGVSYCYVRSPV 452 G++ + L + + + + + + + P+ Sbjct: 476 GGDEFVVVLANLNTNDKEAAQDTETVAEKILATLNQTYQLGHVTHHSSASIGATLFKGPL 535 Query: 453 NHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLM 512 I L+ + + + A N R ++ +K + M + L +AL F L Sbjct: 536 IPIDDLMKQADL--SMYKAKAAGRNAVRFFDPSMEIAVKVRAEMEDDLLRALAEKQFLLH 593 Query: 513 AQPITGMRGDVYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAEN 572 Q E+LLR + ++SP F+P+A E GL + WV+E +A+ Sbjct: 594 YQAQMVGERLTGAEVLLRWQHPQRGMVSPAEFIPLAEETGLILPLGHWVLETACTQLAQW 653 Query: 573 --RAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQ 630 R ++ A+N+S Q F +V +L K +L E+TES + NV+ Sbjct: 654 AGRPEVAHLTLAVNVSAHQFRQNDFVDQVLGVLEKTGANPQRLKLELTESLLVENVEDII 713 Query: 631 ITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASIC 690 + L+ G ++DDFGTGY+S + LK + D LKID SF+R+++++S D I +I Sbjct: 714 DKMAALKHRGVGFSLDDFGTGYSSLSYLKRLPLDHLKIDQSFVRDVLTDSNDASIARTIV 773 Query: 691 HLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNE 739 LA + V+AE VE E R+ + S G QGY +P P+ D + Sbjct: 774 ALANSLGLGVIAEGVETEAQRDFLASSGCHTYQGYYFSRPLPIEDFESF 822 >UniRef50_C5V3L4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V3L4_9PROT Length = 900 Score = 775 bits (2003), Expect = 0.0, Method: Composition-based stats. Identities = 128/527 (24%), Positives = 223/527 (42%), Gaps = 30/527 (5%) Query: 242 STNYT--LSLLLPLMMWGAMRYGYKLISLLW-----AVVLMISIHSYQNYIPIYPGYTTQ 294 T YT ++ + + R S +W V I + + IYP + T Sbjct: 367 ITGYTNKEAIGQNPRLLSSGRQNASFYSAMWKAINTTGVWEGEIWNRRKNGEIYPEHLTV 426 Query: 295 LTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL------ 348 + + +V +++ + T+++A +I+ LA+ DP+ LPN R L L Sbjct: 427 TAVKDRNGMVTNYVGVLSDL--TQRKAAEEKIENLAFFDPLTKLPNRRLLLDRLKQAMAS 484 Query: 349 --RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLA 406 R A+ ++ + + L YG + Q+++ L + G+ V + G++ Sbjct: 485 ATRSVTNGAVLFIDLDNFKALNDTYGHPMGDLLLQQVAKRLVSSVRDGDTVSRFGGDEFV 544 Query: 407 LRLNT-----ESHQERITALDSHL---KQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLL 458 + L + + + + + + I L Sbjct: 545 VLLEGFDENPLDAASQAETVGEQIFAALRQPYLIGTHEYHGTSSIGATLFNDKQQSIDEL 604 Query: 459 LGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITG 518 + + + + N+ R +Q + + A+ L++A+E++ F L Q Sbjct: 605 MKQADIA--MYQAKKEGRNVLRFFDPQMQETIAKRTALEGDLRKAIENHQFQLHYQIQVD 662 Query: 519 -MRGDVYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENR--AK 575 R E L+R ++SPD F+P+A E L I WV+E + + AK Sbjct: 663 ESRHPFGAEALIRWFHPEHGMVSPDQFIPLAEESDLILPIGYWVLETACARIQRWQHDAK 722 Query: 576 MPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQH 635 ++N+S Q F +V L+ +Y+I L E+TES L N++ T+ Sbjct: 723 TSGFVLSVNVSAKQFRQTDFVNQVQSLIQQYEINPSLLKLELTESMLLDNIEDTIATMSA 782 Query: 636 LQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARM 695 L+ELG + ++DDFGTGY+S LK + D LKID SF+R+I ++ D IV +I +A Sbjct: 783 LKELGVKFSLDDFGTGYSSLQYLKRLPLDQLKIDQSFVRDIAVDASDRAIVRTIIAMAHS 842 Query: 696 KKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEP 742 + V+AE VE EE ++ + S G QGYL GKP P+ + Sbjct: 843 LDLDVIAEGVETEEQQKHLSSKGCKNFQGYLFGKPVPIEQFETSLRK 889 >UniRef50_P77172 Inner membrane protein yfgF n=114 Tax=Enterobacteriaceae RepID=YFGF_ECOLI Length = 747 Score = 769 bits (1986), Expect = 0.0, Method: Composition-based stats. Identities = 747/747 (100%), Positives = 747/747 (100%) Query: 1 MKLNATYIKIRDKWWGLPLFLPSLILPIFAHINTFAHISSGEVFLFYLPLALMISMMMFF 60 MKLNATYIKIRDKWWGLPLFLPSLILPIFAHINTFAHISSGEVFLFYLPLALMISMMMFF Sbjct: 1 MKLNATYIKIRDKWWGLPLFLPSLILPIFAHINTFAHISSGEVFLFYLPLALMISMMMFF 60 Query: 61 SWAALPGIALGIFVRKYAELGFYETLSLTANFIIIIILCWGGYRVFTPRRNNVSHGDTRL 120 SWAALPGIALGIFVRKYAELGFYETLSLTANFIIIIILCWGGYRVFTPRRNNVSHGDTRL Sbjct: 61 SWAALPGIALGIFVRKYAELGFYETLSLTANFIIIIILCWGGYRVFTPRRNNVSHGDTRL 120 Query: 121 ISQRIFWQIVFPATLFLILFQFAAFVGLLASRENLVGVMPFNLGTLINYQALLVGNLIGV 180 ISQRIFWQIVFPATLFLILFQFAAFVGLLASRENLVGVMPFNLGTLINYQALLVGNLIGV Sbjct: 121 ISQRIFWQIVFPATLFLILFQFAAFVGLLASRENLVGVMPFNLGTLINYQALLVGNLIGV 180 Query: 181 PLCYFIIRVVRNPFYLRSYYSQLKQQVDAKVTKKEFALWLLALGALLLLLCMPLNEKSTI 240 PLCYFIIRVVRNPFYLRSYYSQLKQQVDAKVTKKEFALWLLALGALLLLLCMPLNEKSTI Sbjct: 181 PLCYFIIRVVRNPFYLRSYYSQLKQQVDAKVTKKEFALWLLALGALLLLLCMPLNEKSTI 240 Query: 241 FSTNYTLSLLLPLMMWGAMRYGYKLISLLWAVVLMISIHSYQNYIPIYPGYTTQLTITSS 300 FSTNYTLSLLLPLMMWGAMRYGYKLISLLWAVVLMISIHSYQNYIPIYPGYTTQLTITSS Sbjct: 241 FSTNYTLSLLLPLMMWGAMRYGYKLISLLWAVVLMISIHSYQNYIPIYPGYTTQLTITSS 300 Query: 301 SYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRDAPWSALCYLR 360 SYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRDAPWSALCYLR Sbjct: 301 SYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRDAPWSALCYLR 360 Query: 361 IPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITA 420 IPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITA Sbjct: 361 IPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITA 420 Query: 421 LDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQR 480 LDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQR Sbjct: 421 LDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQR 480 Query: 481 RGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDVYHEILLRMKGENDELIS 540 RGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDVYHEILLRMKGENDELIS Sbjct: 481 RGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDVYHEILLRMKGENDELIS 540 Query: 541 PDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVS 600 PDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVS Sbjct: 541 PDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVS 600 Query: 601 QLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKN 660 QLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKN Sbjct: 601 QLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKN 660 Query: 661 VNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGID 720 VNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGID Sbjct: 661 VNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGID 720 Query: 721 YMQGYLIGKPQPLIDTLNEIEPIRESA 747 YMQGYLIGKPQPLIDTLNEIEPIRESA Sbjct: 721 YMQGYLIGKPQPLIDTLNEIEPIRESA 747 >UniRef50_A1K3A1 GGEF/EAL/PAS/PAC-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K3A1_AZOSB Length = 818 Score = 763 bits (1971), Expect = 0.0, Method: Composition-based stats. Identities = 128/533 (24%), Positives = 220/533 (41%), Gaps = 25/533 (4%) Query: 232 MPLNEKSTIFSTNYTLSLLLP--LMMWGAMRYGYKLISLLWAVV-----LMISIHSYQNY 284 + ++ T Y ++ + + R+ +W V I + + Sbjct: 288 IIAVNRAFTVITGYGPEEVIGRSPNLLRSGRHDAAYYDAMWRGVHEAGHWQGEIWNRRKN 347 Query: 285 IPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRAL 344 I+P T + + V ++ + + +R + R+QRLA+ D + LPN L Sbjct: 348 GEIFPELLTLSVVRDHNGKVSHYVGVFSDI--SRMKETEARLQRLAHYDALTDLPNRVLL 405 Query: 345 NRAL--------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGED 396 N L R A+ +L I + + + G + + +++ L + + Sbjct: 406 NLRLAHGVERVQRSGEMLAVLFLDIDRFKNVNDSLGHPVGDELLIEIARRLRSRIRAEDT 465 Query: 397 VYQLSGNDLALRLNTESHQERITALDSHLKQF---RFFW-DGMPMQPQIGVSYCYVRSPV 452 + +L G++ + L+ + + F G + + Sbjct: 466 LARLGGDEFVILLDRIRSANDVADFAQEIIDLLNQSFQLASGQEVFVGASIGISLYPLDT 525 Query: 453 NHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLM 512 + L+ + A L A N+ R L R +++ + L++ LE F L Sbjct: 526 DDATQLISNAD--AALYQAKEAGRNVYRFYTADLTRAAHERLGLEAALRRGLERGEFVLH 583 Query: 513 AQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMA 570 QP+ + V E L+R + +I+P F+P+A E GL + WV+E + Sbjct: 584 FQPVVALDKGEVVGAEALVRWNHPTEGMIAPLRFIPLAEETGLIVPLGEWVLESACRQGR 643 Query: 571 ENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQ 630 E A+NLS V +L + A L E+TES + + +A Sbjct: 644 EWLDCGRPLTIAVNLSTRQFRAGDLTATVRDILDRTGFPAALLELEITESTVMEDADRAV 703 Query: 631 ITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASIC 690 TL L+ LG +++IDDFGTGY+S A LK D LKID SF+R+I + D IVA++ Sbjct: 704 ATLAALKGLGVRLSIDDFGTGYSSLAYLKRFAVDALKIDRSFVRDIADDENDRMIVATVV 763 Query: 691 HLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPI 743 +A ++ V+AE VE E + SLG + QGYL+G+PQ D L +E Sbjct: 764 AMAHQMRLGVIAEGVETAEQLAFLRSLGCEAYQGYLVGRPQAAADFLGAVERA 816 >UniRef50_Q2W807 Predicted signal transduction protein n=4 Tax=Magnetospirillum RepID=Q2W807_MAGSA Length = 880 Score = 762 bits (1969), Expect = 0.0, Method: Composition-based stats. Identities = 127/609 (20%), Positives = 230/609 (37%), Gaps = 41/609 (6%) Query: 165 TLINYQALLVGNLIGVPLCY-------FIIRVVRNPFYLRSYYSQLKQQVDAKVTKKEFA 217 + LVG L + + S+ + KV + Sbjct: 269 GITRMDGELVGLLSFSDILATLQYEYVHRLDEALKERDAALLRSRKDLNLARKVIEASLD 328 Query: 218 LWLLALGALLLLLCMPLNEKSTIFSTNYTLSLLLPLM--MWGAMRYGYKLISLLWAVV-- 273 ++ + P T YT ++ + + + ++ V+ Sbjct: 329 GIMIVDSTQKIEFVNPAFTHM----TGYTAEEIIGKNPNVLKSGHHDETFYKHMYTVLEA 384 Query: 274 ---LMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLA 330 I + + IYP + T I + + + + + T ++ RI+ LA Sbjct: 385 QDYWQGEIWNRRKNGEIYPEWLTINVIRDDTGDITQYAAIFSDI--TERKKTEERIKNLA 442 Query: 331 YVDPVVHLPNVRALNRAL--------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQK 382 Y D + LPN R L R A+ +L + + + + G + Q + Sbjct: 443 YFDVLTALPNRRLFTDRLQIAIANAHRHGQQLAIMFLDLDLFKRINDSLGHGVGDQVLVE 502 Query: 383 LSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLKQF---RFFWDGMPMQP 439 + +S + G+ V +L G++ + L H E + L + F D + Sbjct: 503 TAARISHCVREGDTVARLGGDEFTVLLPELDHLEDVAKLAERVIAHVKQPFLVDDNELYV 562 Query: 440 QIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNR 499 + + L+ +T + + N + + +++ M + Sbjct: 563 TTSIGIAVYPEDGTTVEALIKNADTA--MYRAKDLGRNSYQLYTAAMNARSFERLTMESS 620 Query: 500 LQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSI 557 L+ AL F L+ Q E L+R L+SP F+P+A G+ S I Sbjct: 621 LRHALTREEFRLVYQVKVDSEDGRMSGVEALVRWHHPEMGLVSPVDFIPLAEAMGVISDI 680 Query: 558 DMWVIEHTLQFMAENRA-KMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFE 616 WV+ + +P R A+N+S + P V++ L + + L E Sbjct: 681 GEWVLRTACRQCKHWMDLGLPPVRIAVNVSAQQFVETDVPEVVARALRETGLPPQYLELE 740 Query: 617 VTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNI 676 +TE+ + V + L+ L+ +G +I+IDDFGTGY+S + LK + D LK+D SF+ +I Sbjct: 741 LTETVLMQRVDEVVAVLKSLRAMGVRISIDDFGTGYSSLSYLKRMPIDALKVDRSFVNDI 800 Query: 677 VSN-----SLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQ 731 +IV++I +LA K+ +AE VE E E + S G D +QGYLI +P Sbjct: 801 FDGQSKVTEDGAEIVSTIINLAHNLKLKAIAEGVETPEQAEFLRSKGCDEVQGYLISRPV 860 Query: 732 PLIDTLNEI 740 D ++ Sbjct: 861 SGEDLISLF 869 >UniRef50_C5S5K8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S5K8_CHRVI Length = 1069 Score = 761 bits (1966), Expect = 0.0, Method: Composition-based stats. Identities = 125/534 (23%), Positives = 225/534 (42%), Gaps = 26/534 (4%) Query: 236 EKSTIFSTNYTLSLLLP--LMMWGAMRYGYKLISLLWAVV-----LMISIHSYQNYIPIY 288 ++ + Y+ +L + + R + +W + I + + +Y Sbjct: 539 NRAFTEISGYSEPEVLGRNPSLLRSNRQDHAFYQAMWHSLKTTGHWQGEIWNRRKSGELY 598 Query: 289 PGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRA----- 343 P T T+ S ++ + ++ + R++ L + DP+ +LPN R Sbjct: 599 PQILTINTVADSQGRPSHYVGVMTDI--SQLKQSEARLEHLVHYDPLTNLPNRRLVQSRL 656 Query: 344 ---LNRALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQL 400 L RA R A+ ++ + + + + G + L+ LS + + + +L Sbjct: 657 EHALERADRQGGRVAVLFVDLDRFKTVNDSLGHPSGDVLLELLARRLSERVREDDTLARL 716 Query: 401 SGNDLALRLNTESHQERITALDSHLK---QFRFFW-DGMPMQPQIGVSYCYVRSPVNHIY 456 G++ + L E A+ L Q F +G + + + + Sbjct: 717 GGDEFLVLLENLQRPEDAAAVAESLLSLLQQPFHLPNGQELYVGASIGISLYPDDGHTVT 776 Query: 457 LLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPI 516 L+ + + N R L + ++++ + RL +AL F L Q Sbjct: 777 DLIQHADVA--MYQAKEEGRNTYRFYTPSLTQTARERLGLEARLHRALASEEFVLHYQAQ 834 Query: 517 TGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRA 574 MR + E L+R + L++PD F+P+A E GL + WV+ RA Sbjct: 835 IDMRDGRLIGCEALVRWHSATEGLVAPDRFIPLAEETGLIVPLGEWVLRQACADCQSWRA 894 Query: 575 -KMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITL 633 + A+NLS + V+++L + + A +L E+TES + +QA L Sbjct: 895 RGLTDLTVAVNLSGRQLRSPDLVERVTRVLRETGLPAERLKLELTESMIMDQREQALERL 954 Query: 634 QHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLA 693 + L+ LG +++IDDFGTGY+S A LK + D LKID F+R+I +S D +I A+I +A Sbjct: 955 RALKALGVRLSIDDFGTGYSSLAYLKRLPIDELKIDRDFVRDIPEDSSDMEIAATIIAMA 1014 Query: 694 RMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIRESA 747 R ++ V+AE VE E + ++ G QGYL G+P P + +A Sbjct: 1015 RNLRLNVIAEGVETPEQCDFLIRQGCTAGQGYLFGRPLPAEAFAQVMRACGTTA 1068 >UniRef50_Q31GH8 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=3 Tax=cellular organisms RepID=Q31GH8_THICR Length = 1466 Score = 759 bits (1961), Expect = 0.0, Method: Composition-based stats. Identities = 106/530 (20%), Positives = 206/530 (38%), Gaps = 24/530 (4%) Query: 236 EKSTIFSTNYTLSLLLPL--MMWGAMRYGYKLISLLWAVV-----LMISIHSYQNYIPIY 288 ++ + Y++ L M + R+ + +W + I + + I+ Sbjct: 940 NEAFSEISGYSVEETLGKTPRMLASGRHSREFYQNVWKSIKEKGHWQGEIWNRRKNGEIF 999 Query: 289 PGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL 348 P + + +S V ++ + + ++ + +I+ LA+ DP+ L N L L Sbjct: 1000 PEWLSISRGLDTSGNVTEYVGIFNDI--SKVKESEEKIKHLAHYDPLTGLVNRELLMDRL 1057 Query: 349 --------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQL 400 R+ AL ++ + + + G + Q ++ + +L + + + Sbjct: 1058 NHSISTADRNNTPLALLFIDLDHFKNVNDTLGHQVGDQLLIEVGQRILKILRDEDTIARQ 1117 Query: 401 SGNDLALRLNTESHQERITALDSHLKQF--RFFWDGMPMQPQIGVSYCYVRSPVNHIYLL 458 G++ + L + + L+ + + + L Sbjct: 1118 GGDEFIVVLPDTGENGAVHVAEKILESISDQLNLKPYKLFITPSIGIAVYPQDGKDADSL 1177 Query: 459 LGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITG 518 L +T + N N+ R M +Q + + + L+ AL F L QP T Sbjct: 1178 LKNADTA--MYQAKNDGRNVYRFFTMEMQAHSSRIMQIESALRVALFDQQFELYYQPQTC 1235 Query: 519 MRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKM 576 + + E L+R +SP F+PVA + G +I WV+ ++ + Sbjct: 1236 AKSGSIIGVEALIRWNHPEMGPVSPQEFIPVAEQSGQILAIGWWVLRTAIRQIKIWSEHG 1295 Query: 577 PA-HRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQH 635 + A+NLS P +V ++L + + L E+TES A+ N + + Sbjct: 1296 KPCIKVAVNLSAVQFRYEDLPKQVMKILEEEGVSPEFLELELTESVAMANPEAVIEMMDK 1355 Query: 636 LQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARM 695 L G +++IDDFGTGY+S + LK LKID SFIR++ +S D I+ +I L++ Sbjct: 1356 LVGHGIKMSIDDFGTGYSSLSYLKRFKVSKLKIDQSFIRDLAVDSDDRSIIEAIISLSKA 1415 Query: 696 KKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIRE 745 + +AE VE + + + D +QG+ K E + Sbjct: 1416 LGLKTIAEGVETQAQLDFLQEKQCDEIQGFYYSKALTPEAFDAFYEKQSQ 1465 >UniRef50_C6P1A0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1A0_9PROT Length = 1011 Score = 758 bits (1959), Expect = 0.0, Method: Composition-based stats. Identities = 137/580 (23%), Positives = 235/580 (40%), Gaps = 33/580 (5%) Query: 192 NPFYLRSYYSQLKQQVDAKVTKKEFALWLLALGALL---LLLCMPLNEKSTIFSTNYTLS 248 N L + + AK + A + +L + + ++ T YT Sbjct: 435 NISLLLGITRDVTASMHAKQQLRIAATAFESQEGMLVTDAVGAILRVNQAFTRITGYTAD 494 Query: 249 LLLP--LMMWGAMRYGYKLISLLWA-----VVLMISIHSYQNYIPIYPGYTTQLTITSSS 301 ++ + + R+ +W I + + +YP + T + + Sbjct: 495 EVIGKNPRILNSGRHDAYFYKEMWERIKRTGEWEGEIWNRRKNGDVYPEHLTITAVKDAG 554 Query: 302 YLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL--------RDAPW 353 V +++ M + T +A I+ LA+ DP+ LPN R L L R Sbjct: 555 GNVVNYVATLMDI--TASKASEEEIRNLAFFDPLTRLPNRRLLQDRLQQALASCGRSGKS 612 Query: 354 SALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTES 413 A+ ++ + + L G + +K++ LS + G+ V ++ G++ + L S Sbjct: 613 GAILFIDLDNFKNLNDTLGHDIGDLLLEKVAIRLSSCVREGDTVARIGGDEFVVMLEDLS 672 Query: 414 H-----QERITALDSHLKQ---FRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTV 465 E+ ++ S + + + N I LL + + Sbjct: 673 DNILDAAEQTESVGSKILASLNVPYQLGIHTYDNSPSIGATLFNDNHNSIDELLKQADIA 732 Query: 466 AELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITG-MRGDVY 524 + A N R +Q+ L ++A+ L++A+E + F L Q + Sbjct: 733 --MYQAKKAGRNTMRFFDPRMQQSLSARLALELELRKAIEKDQFQLYYQIQVDETHRPLG 790 Query: 525 HEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAK--MPAHRFA 582 E LLR L++P F+P+A E GL I WV+E + + Sbjct: 791 AEALLRWMHPEHGLMAPAEFIPMAEETGLIVPIGWWVLETACTQLKAWEKDPLTRNLVLS 850 Query: 583 INLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQ 642 IN+S Q F +V + Y I+ L E+TES L NV + L++ G Sbjct: 851 INVSAKQFHQPDFVDQVQAAVDHYGIDPALLKLELTESILLENVDTTIKRMSALKKTGVG 910 Query: 643 IAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVA 702 ++DDFGTGY+S LK + D LKID SF++ I S+S D IV++I +A+ +M V+A Sbjct: 911 FSLDDFGTGYSSLQYLKRLPLDQLKIDQSFMQEITSDSSDMAIVSTIIAMAQSMQMGVIA 970 Query: 703 EYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEP 742 E VE EE R+ +L G ++ QGYL KP P+ + Sbjct: 971 EGVETEEQRQLLLRKGCNHFQGYLFSKPVPVEQFEKLLHR 1010 >UniRef50_C5V1I4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gallionellaceae RepID=C5V1I4_9PROT Length = 935 Score = 758 bits (1957), Expect = 0.0, Method: Composition-based stats. Identities = 134/668 (20%), Positives = 259/668 (38%), Gaps = 37/668 (5%) Query: 101 GGYRVFTPRRNNVSHGDTRLISQRIFWQIVFPATLFLILF-----QFAAFVGLLASRENL 155 G+ + N + R + Q I+ LF L + A + L++ + Sbjct: 278 LGWASLVRQDVNTAFAPARQLQQHIWLVGAALGLLFAWLGWLMAGRIARPISLISQAADK 337 Query: 156 VGVMPFNLGTLINYQALLVGNLIGVPLCYFIIRVVRNPFYLRSYYSQLKQQVDAKVTKKE 215 V V +L I +V N + + +Q + E Sbjct: 338 VAGGDLEYELPARLGEGEVAHLSTA-----IHDMVVNLTHEIKQRKEAEQGLRLSAKVFE 392 Query: 216 FALWLLALGALLLLLCMPLNEKSTIFSTNYTLSLLLPLM--MWGAMRYGYKLISLLWAVV 273 A+ + + ++ T Y +L + + R+G + W + Sbjct: 393 SNT--EAIMITDAEQNIVMVNQAFTQITGYGADEVLGQRPKLLSSGRHGPEFYEAFWHAL 450 Query: 274 -----LMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQR 328 I + + I+P + T + + + ++ ++ + T ++ RI Sbjct: 451 RANDLWRGEIWNKRKNGEIFPEWVTISALRDETSQISHYVAVFLDI--TERKKEEERINY 508 Query: 329 LAYVDPVVHLPNVRALNRA--------LRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYK 380 LA D + LPN L+ R+ A+ ++ + + + + G + Sbjct: 509 LANYDVLTGLPNRYLLSDRIEQAFSSAQRNNFKVAVLFIDLDYFKNINDSLGHDIGDALL 568 Query: 381 QKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLKQ---FRFFWDGMPM 437 + ++ L L + + +L G++ L+ E + + + + +F + Sbjct: 569 KLVAARLKTCLRRSDTIARLGGDEFVALLSELDSSEEVIFVAEKMIESLTEKFTLGEYQL 628 Query: 438 QPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMM 497 + C LL + + + N + + + R+ +++ + Sbjct: 629 SITPSIGICIYPDDGETSVELLRNADLA--MYQAKDDGRNNFKFYSPDMNRKALERLKLE 686 Query: 498 NRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSS 555 L+ A+ + QP + E LLR + ISP F+P+A E GL + Sbjct: 687 TFLRVAIVQQQLSVYYQPKVSVLSGKMTGMEALLRWQHPELGFISPAVFIPIAEETGLIN 746 Query: 556 SIDMWVIEHTLQFMAENRAKMPAH-RFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLI 614 I WV+ + +A+ A+NLS + Q F V +L + ++A L+ Sbjct: 747 EIGDWVLRQSCLQARLWQAQGYDIVPIAVNLSARQLKQDNFAARVVTILREAGLDAHYLV 806 Query: 615 FEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIR 674 E+TES ++ + L+ L++ G ++A+DDFGTGY+S +RLKN+ D LKID SF+R Sbjct: 807 LEITESMLMSTGESGLQILEQLRDDGVRLALDDFGTGYSSLSRLKNLPLDSLKIDQSFVR 866 Query: 675 NIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLI 734 +IV++ D IV++ LA + V AE VE +E + + L + QGYL +P P Sbjct: 867 DIVTDPNDASIVSATAVLAHALNLKVTAEGVETQEQLDFIRMLNCEEYQGYLFSRPIPAS 926 Query: 735 DTLNEIEP 742 + + P Sbjct: 927 EVVKYFLP 934 >UniRef50_C6ME82 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Nitrosomonas sp. AL212 RepID=C6ME82_9PROT Length = 1136 Score = 757 bits (1956), Expect = 0.0, Method: Composition-based stats. Identities = 122/536 (22%), Positives = 220/536 (41%), Gaps = 26/536 (4%) Query: 232 MPLNEKSTIFSTNYTLSLLLP--LMMWGAMRYGYKLISLLWAVV-----LMISIHSYQNY 284 + ++ T Y+ +L + + R+ +WA + + + + Sbjct: 589 IVAINRAYAEITGYSEEQVLGKNPRIIKSGRHDKLFYQAMWASLTKAGYWRGEVWNRRRS 648 Query: 285 IPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNV--- 341 IYP + T T+ + +++ + + T+ + R+ LA+ D + LPN Sbjct: 649 GDIYPQWLTISTVFNDRNEPCNYVGVFTDI--TQIKQSEARLAHLAHYDALTGLPNRLLV 706 Query: 342 -----RALNRALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGED 396 A+ R LR A YL + + + + G + + L+ L L + Sbjct: 707 QSRLHHAIERTLRHGNQIAALYLDLDRFKNVNDSLGHPIGDELLVMLALRLKKRLREEDT 766 Query: 397 VYQLSGNDLALRLNTESHQERITALDSHLKQF---RFFW-DGMPMQPQIGVSYCYVRSPV 452 + +L G++ + L + L F G + + + Sbjct: 767 LARLGGDEFLVVLEDIKDSNEPAMVAQTLIDLLATPFSLPSGHEIFINTSIGISLFPTDA 826 Query: 453 NHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLM 512 N + L+ + + + N R L +++ + +L+QAL F L Sbjct: 827 NSVTELIQHADMA--MYLAKQEGRNTYRYHTDALSIAANERLVLETQLRQALSAGEFVLH 884 Query: 513 AQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMA 570 QP+ R + E L+R + + ++SP F+P+A E GL + WV+ Sbjct: 885 YQPLIDARKGQVMGVEALVRWQPPDKAMVSPGKFIPIAEETGLIVPLGEWVLRTACAQGR 944 Query: 571 EN-RAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQA 629 A P A+NLS + Q+L + ++ A L E+TES + + +Q+ Sbjct: 945 AWMDADFPPLVMAVNLSVRQFQSENLVELIRQVLEETKLPAACLELELTESMFMEHAEQS 1004 Query: 630 QITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASI 689 L+ L+ LG +++IDDFGTGY+S LK D LKID SF+ + + D +I A+I Sbjct: 1005 IEILKTLKSLGVRLSIDDFGTGYSSLTYLKRFPIDKLKIDQSFVHGLAYDPNDREIAATI 1064 Query: 690 CHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIRE 745 +AR K+ V+AE VE+E+ + + G DY QGYL +P P + + Sbjct: 1065 IAMARNLKLDVLAEGVESEQQLDILNQHGCDYYQGYLFHRPVPAQELEVWFRENKR 1120 >UniRef50_C5V1H2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V1H2_9PROT Length = 1134 Score = 757 bits (1955), Expect = 0.0, Method: Composition-based stats. Identities = 118/537 (21%), Positives = 221/537 (41%), Gaps = 30/537 (5%) Query: 236 EKSTIFSTNYTLSLLLP--LMMWGAMRYGYKLISLLWAVV-----LMISIHSYQNYIPIY 288 ++ T Y+ +L + A R S +W + I + IY Sbjct: 601 NQAFQRITGYSQEEVLGENPRILSAGRNEKSFYSAMWQQLTTLGRWRGEIWDKRKSGQIY 660 Query: 289 PGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL 348 P + T + + ++ + + T+++ I+ LA+ D + LPN R L L Sbjct: 661 PKWMTITAVRDENGKTTEYVAIFSDI--TQRKLAEEEIRNLAFYDALTRLPNRRLLLDRL 718 Query: 349 --------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQL 400 R + A+ +L + + L G +++ + + + V +L Sbjct: 719 HAALSVSARSRRFGAVLFLDMDRFKTLNDTMGHDYGDLLLIEVAERIKLCVREIDTVARL 778 Query: 401 SGNDLALRLNTESHQER-----ITALDSHLKQ---FRFFWDGMPMQPQIGVSYCYVRSPV 452 G++ + + + I A+ ++ + + C R Sbjct: 779 GGDEFVILVEEIDTRAEETSKHIAAIAEKIRSALSVPYRLKEKHHHSSPSIGVCLYRGIE 838 Query: 453 NHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLM 512 LL + + ++ N R +Q+ ++ +V + N L+ AL ++ L Sbjct: 839 ESTDDLLKHADMA--MYQAKDSGRNAVRFFDPLMQQAVEARVTLENDLRHALPNDQLQLY 896 Query: 513 AQPITGMRGD-VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAE 571 Q + E L+R ++SP F+P+A E L + WV++ +A Sbjct: 897 YQIQVDNDRRAIGAEALVRWIHPIRGMVSPAHFIPIAEETSLILEVGAWVLKTACLQLAV 956 Query: 572 NRAK--MPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQA 629 + A+N+S Q F +++L+ Y I +L E+TES L +V Sbjct: 957 WADRPMTCNLILAVNVSVQQFKQVGFVEHIAELIRAYCIVPQRLKLELTESVVLNDVSDI 1016 Query: 630 QITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASI 689 + L+ LG ++++DDFGTGY+S + LKN+ D LKID SF+RNI ++ D +V +I Sbjct: 1017 VQKMCALKSLGVRLSMDDFGTGYSSLSYLKNLPLDQLKIDQSFVRNIATDENDAVMVKTI 1076 Query: 690 CHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIRES 746 +A+ ++ V+AE VE E + G QGY GKP P+ +++E + ++ Sbjct: 1077 IAMAQNFRLNVIAEGVETEAQLAFLKQNGCMCYQGYYFGKPAPIEQFQSQLEALSKT 1133 >UniRef50_C7RJ77 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RJ77_9PROT Length = 1399 Score = 756 bits (1952), Expect = 0.0, Method: Composition-based stats. Identities = 116/528 (21%), Positives = 208/528 (39%), Gaps = 25/528 (4%) Query: 236 EKSTIFSTNYTLSLLLP--LMMWGAMRYGYKLISLLWAVV-----LMISIHSYQNYIPIY 288 ++ T Y+ +L + + R+ +W + I + + +Y Sbjct: 876 NQAFTRITGYSEVEVLGRNPSLLASGRHDQAFYQSMWESIESLGHWQGEIWNRRKDGSVY 935 Query: 289 PGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL 348 P + + +I ++ + T+ + IQRLA+ D + LPN L + Sbjct: 936 PEWLLISRV-DGDGAPTHYIGTFIDI--TQHKEAEASIQRLAHFDALTGLPNRSLLEERV 992 Query: 349 RD--------APWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQL 400 R AL ++ + + + + G + +++ L + + V +L Sbjct: 993 RHDLARAHRGREALALMFVDLDRFKNVNDSLGHRVGDALLIQVAERLRRAVRDEDTVSRL 1052 Query: 401 SGNDLALRLNTESHQERITALDSHLK--QFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLL 458 G++ + L + L+ + + + + + L Sbjct: 1053 GGDEFIVVLPSTDADGAAHVAAKLLEVMAPAYRIEQHELTCSLSAGIAMYPADGESFEAL 1112 Query: 459 LGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITG 518 +T + + N +Q + + N L++ALE+ L QP Sbjct: 1113 SMSADTA--MYRAKQSGRNAYCFFTAEMQERSARNLQIENDLRRALENGELRLHYQPQFT 1170 Query: 519 MRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRA-K 575 + V E LLR + ++SP F+P+A E GL I WV+ + + + Sbjct: 1171 LADRRLVGAEALLRWQHPQLGMVSPVEFIPIAEECGLILPIGEWVLRAAVSQLRVWQQEG 1230 Query: 576 MPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQH 635 +P A+NLS QA VS++L + A L E+TES A+ N A T+ Sbjct: 1231 LPPMTVAVNLSAVQFRQASLTDVVSRILDAEGLAAQFLELELTESVAMDNPLAAIATMDK 1290 Query: 636 LQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARM 695 L+ LG +++IDDFGTGY+S + LK LKID SF+ ++ ++ D IV + LAR Sbjct: 1291 LRALGVRMSIDDFGTGYSSMSYLKRFRVHKLKIDRSFVADLAADPEDEAIVTATISLARD 1350 Query: 696 KKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPI 743 + +AE VE+E + + G D QGYL +P + Sbjct: 1351 LGLQTIAEGVESEAQLAFLRAKGCDEAQGYLFSRPLAPAQFAAFVRAH 1398 >UniRef50_C6X6V4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X6V4_METSD Length = 1126 Score = 754 bits (1949), Expect = 0.0, Method: Composition-based stats. Identities = 114/521 (21%), Positives = 214/521 (41%), Gaps = 25/521 (4%) Query: 242 STNYTLSLLLPLM--MWGAMRYGYKLISLLWAVV-----LMISIHSYQNYIPIYPGYTTQ 294 T Y ++ + + A + +W + + I + + YP + + Sbjct: 595 ITGYDKEEIIGKLPSVMQAGLHEAAYYEGIWQTLRREGQWVGEIWNRRKSGESYPEWLSI 654 Query: 295 LTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRA------- 347 + + V +++ + + T+++ R+Q LA D + HLPN L Sbjct: 655 SQVADAKGSVQNYVAVFTDI--TQRKLSEERLQFLANHDALTHLPNRALLQERIDQALFR 712 Query: 348 -LRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLA 406 R+ A+ ++ + +++ G Q+ + L L + V + G++ Sbjct: 713 AQRNKTAIAVLFIDLDRFKIINDTLGHQTGDMLLQEAAKRLKECLRETDTVARQGGDEFV 772 Query: 407 LRLNTESHQERITALDSHL---KQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELN 463 + + + + + + F G + + LL + Sbjct: 773 VLVEDCGDTDYLNTIARKIMATLAQPFILVGRELFISASIGISVYPDDGLDTASLLKHAD 832 Query: 464 TVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD- 522 A + + +N R A + + + N L++A+E N F L QP +R Sbjct: 833 --AAMYRAKESGKNTFRFYAAEANTNSVELLTLENNLRRAVERNEFVLHYQPKVDLRSQK 890 Query: 523 -VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRA-KMPAHR 580 + E ++R + ++SP F+P+A E GL I W++ + + E + R Sbjct: 891 IIGAEAVVRWQHPELGMLSPMQFIPLAEETGLIIDIGAWIMRESCRQAVEWQQLTGQNVR 950 Query: 581 FAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELG 640 A+NLS ++ L + + L E+TES + N ++A+ LQH +LG Sbjct: 951 VAVNLSARQFRDETLRQTIADALTESGLTPDCLELEITESMIMHNAERAREVLQHFHDLG 1010 Query: 641 CQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLV 700 + IDDFGTGY+S+ LK+ D LKID SF+R+I + D I +I +A ++ V Sbjct: 1011 AHVLIDDFGTGYSSFGYLKHFPIDSLKIDRSFVRDIPDDVDDMAITQAIIAMAHSLQIKV 1070 Query: 701 VAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIE 741 VAE VE +E + G D +QG+L +P D + ++ Sbjct: 1071 VAEGVETQEQLAFLKKQGCDQIQGFLFSEPLHSHDFVRMLK 1111 Score = 52.3 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 56/332 (16%), Positives = 112/332 (33%), Gaps = 50/332 (15%) Query: 19 LFLPSLILPIFAHINTFAHISSGEVFLFYLPLALMISMMMFFSWAALPGIALGIFVRKYA 78 L + + + +N + I L +++++ F + A P I +G Sbjct: 20 LSIIVFVYCLLGSLNLWIPIPDAWATLISPTAGFSLAILLVFGYRAWPAIFMGSLFTHLH 79 Query: 79 ELGFYETLSLTAN-FIIIIILCWGGYRVFTPRRNNVSHGDTRLISQRIFWQIVFPATLFL 137 +Y ++ + ++ C+ + V+ D LI R F +VF A Sbjct: 80 ATVYYVAATMAVGDTLETLLACYLLKQ--------VARFDPALIRLRDFLTLVFFA---- 127 Query: 138 ILFQFAAFVGLLASRENLVGVMPFNLGTLINYQALLVGNLIGVPLC--YFIIRVVRNPFY 195 VG+ L+ V+ + ++ + N F ++ P Sbjct: 128 --------VGISPLVSALINVL---MLVVVGADTTALANSFTNSWLEDAFSY-LLFTPAV 175 Query: 196 LRSYYSQLKQQVDAKVTKKEFALWLLALGALLLLLCMPLNEKSTIFSTNYTLSLLLPLMM 255 L Y+ + + A+V E + + LL + +KS +L PL+M Sbjct: 176 LAFYHYEPIRWSWARVG--EALILAGLVVFSCLLTMLGAMDKSMSQLMQPQAFMLFPLIM 233 Query: 256 WGAMRY---GYKLI------SLLWAVVLMISIHSY---QNYIPIYPGYTTQLTITSSSYL 303 W A+R+ G L + LW + ++ Q+ + Y Y + SS+ + Sbjct: 234 WAALRFHQRGAALSVLFVAMTALWGGAHGLGTFAHDFAQSNLLDYWMYVL---VLSSTGV 290 Query: 304 VFSFIVNYMAVLATRQRAVVRRIQRLAYVDPV 335 S + + R + L D + Sbjct: 291 ALS--GLNAGRIRSEARLKEQ----LDTYDAL 316 >UniRef50_A1K4Z0 EAL/GGDEF/PAS/PAC-domain containing signalling protein n=2 Tax=Rhodocyclaceae RepID=A1K4Z0_AZOSB Length = 880 Score = 752 bits (1942), Expect = 0.0, Method: Composition-based stats. Identities = 114/537 (21%), Positives = 213/537 (39%), Gaps = 25/537 (4%) Query: 232 MPLNEKSTIFSTNYTLSLLLP--LMMWGAMRYGYKLISLLWAVV-----LMISIHSYQNY 284 + + T Y++ + + + R +WA + I + + Sbjct: 339 IVAVNPAFTDITGYSIEEIHGRTPAVLASGRQDAAFYREMWATLGKRGQWQGEIWNRRRS 398 Query: 285 IPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRAL 344 IYP + + IT V +I + + T ++ RI+ LA+ D + LPN L Sbjct: 399 GEIYPEWLSITAITEGDGGVSHYIGIFSDI--TDRKESEARIRHLAHHDALTGLPNRLLL 456 Query: 345 NRAL--------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGED 396 L R++ +A+ +L + + + G + ++++ + + Sbjct: 457 QDRLGQAILKARRNSTQAAVLFLDLDRFKTINDTLGHEIGDGLLRQVTQRCLGAVRETDT 516 Query: 397 VYQLSGNDLALRLNTESHQERITALDSHLKQF---RFFWDGMPMQPQIGVSYCYVRSPVN 453 V + G++ + L H + + + + + Sbjct: 517 VARQGGDEFVIVLPDLEHGQDAGTIARKILAALTEPCRLGPHELTVTGSIGIALYPGDGA 576 Query: 454 HIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMA 513 +LL + A + N + A + ++ + ++L+ AL+ N L Sbjct: 577 DPSMLLRNAD--AAMYRAKADGRNGFQFYAADMNTHSLGELLLEHQLRGALDRNELRLYF 634 Query: 514 QPITGMRGDV--YHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAE 571 QP E LLR + + L++P F+P A E GL I WV+ + + Sbjct: 635 QPKVNAADGCIEGCEALLRWQHPDLGLLAPGRFVPAAEESGLIVPIGEWVLREACRQLRA 694 Query: 572 N-RAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQ 630 A + A+NLS V + LA++++ A L E+TE+ + ++++ Sbjct: 695 WIDAGLAPVPVAVNLSGQQFAHQDIVALVREALAEHRLPAPMLELELTETMLMRDLERTI 754 Query: 631 ITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASIC 690 TL L+ +G +AIDDFGTGY+S A L+ + + LKID SF+ +I S D +I ++ Sbjct: 755 ATLAELRAMGVTLAIDDFGTGYSSLAYLRQFDVNALKIDRSFVHDIRPGSSDGKIATAVI 814 Query: 691 HLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIRESA 747 LA + V AE VE + + G D +QG+L G+P+P + A Sbjct: 815 ALAHNLGLTVTAEGVETAAQQHFLARHGCDQLQGFLFGQPEPAEAFAQRLADDDRRA 871 >UniRef50_Q0AIX2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=6 Tax=Proteobacteria RepID=Q0AIX2_NITEC Length = 791 Score = 751 bits (1939), Expect = 0.0, Method: Composition-based stats. Identities = 120/540 (22%), Positives = 218/540 (40%), Gaps = 31/540 (5%) Query: 232 MPLNEKSTIFSTNYTLSLLLP--LMMWGAMRYGYKLISLLWAVV-----LMISIHSYQNY 284 + ++ + T Y+ +L + + + +WA + + + + Sbjct: 252 IVAVNRAYMRITGYSEEQVLGKNPKIIKSGLHDKTFYQAMWATLKATGHWSGEVWNRRKN 311 Query: 285 IPIYPGYTTQLTIT-----SSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLP 339 IYP + T + +++ + + ++ + ++ +LA+ DP+ LP Sbjct: 312 GEIYPQWLTINAVCIDSSCCDESNSCNYVGVFTDI--SQIKQSEAQLAQLAHYDPLTGLP 369 Query: 340 NV--------RALNRALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLL 391 N +A+ RA R + Y+ + + + + G + + KL+ + + Sbjct: 370 NRLLAQSQLHQAIERAQRHGRLVGVLYIDLDRFKNVNDSLGHPVGDELLIKLAERMKKRV 429 Query: 392 EPGEDVYQLSGNDLALRLNTESHQERITALDSHLKQF---RFFW-DGMPMQPQIGVSYCY 447 + + +L G++ L L + L F G + + Sbjct: 430 REEDTLARLGGDEFLLVLEDVRDLGDPAFVAQSLINLLTSPFVLPSGHEIFINASIGISL 489 Query: 448 VRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHN 507 ++ L+ + + N R L +++ M NRL+ AL Sbjct: 490 FPEDASNATELIQHSDMA--MYQAKKEGRNTYRYHTEALSVAANERLIMENRLRYALSAE 547 Query: 508 HFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHT 565 L QP+ R V E L+R + ++ P F+P+A E GL + WV+ Sbjct: 548 ELILHYQPLVDARTGYVVGVEALVRWQPPGKAMVPPGKFIPIAEETGLIVPLGEWVLRTA 607 Query: 566 LQFMAEN-RAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALT 624 + A + A+NLS V ++L + Q+ A L E+TES + Sbjct: 608 CKQARAWIDAGLSPLVMAVNLSVRQFQSENLVGMVQRILEETQLPADYLELELTESMFME 667 Query: 625 NVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQ 684 +V+Q+ TL L+ LG +AIDDFGTGY+S LK D LKID F+R++ + D + Sbjct: 668 HVEQSIETLNKLKTLGVHLAIDDFGTGYSSLIYLKRFPIDKLKIDQRFVRDLADDHNDRE 727 Query: 685 IVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIR 744 I A+I +AR K+ V+AE +E+EE + DY QGYL +P P I+ + Sbjct: 728 IAATIIAMARGLKLGVLAEGIESEEQLAFLRQQDCDYYQGYLFHRPVPAIELEAWLREHS 787 >UniRef50_B2T9B2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=2 Tax=Burkholderiales RepID=B2T9B2_BURPP Length = 1037 Score = 750 bits (1938), Expect = 0.0, Method: Composition-based stats. Identities = 118/544 (21%), Positives = 215/544 (39%), Gaps = 29/544 (5%) Query: 222 ALGALLLLLCMPLNEKSTIFSTNYTLSLLLPL--MMWGAMRYGYKLISLLWAVV-----L 274 + + + T YT ++ + + R+ +W + Sbjct: 485 PMMITDASATILRVNSAFTECTGYTAEEIVGQTPRVLRSGRHDDAFFQEMWEEIHSAGGW 544 Query: 275 MISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDP 334 + + +YP + T + S + V ++ + + T ++ RI+ LA+ D Sbjct: 545 QGEVWDRRKNGEVYPKWLTISAVMSDNGTVSHYVGTHHDI--TERKIAEERIKELAFFDA 602 Query: 335 VVHLPNVRALNRALRDAP--------WSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHW 386 + LPN L LR A AL ++ + + L G Q+++ Sbjct: 603 LTRLPNRTLLLDRLRQAITASARNEACGALLFIDLDHFKTLNDTLGHDKGDLLLQQVARR 662 Query: 387 LSPLLEPGEDVYQLSGNDLALRLNTE-----SHQERITALDSHLKQF---RFFWDGMPMQ 438 L+ + + V ++ G++ + L + A+ + + + + Sbjct: 663 LADSVLESDTVARVGGDEFVVVLGNLHKNRQEAANQTEAVGERILAVLGSPYHLGKIEYR 722 Query: 439 PQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMN 498 + R I LL + + + N R +Q + + A+ Sbjct: 723 TSASIGATVFRGHQASIDELLKQADLA--MYKSKERGRNAVRFFDPDMQTVVVQRAALEA 780 Query: 499 RLQQALEHNHFFLMAQPITGMRGDVYHEILLRMKGENDELISPDSFLPVAHEFGLSSSID 558 L+ A+E N F L Q E L+R + ++ P F+P+A E GL ++ Sbjct: 781 GLRNAIEDNQFLLHYQAQVVGTRVTGAEALVRWQHPQRGIVPPAEFIPLAEETGLIVALG 840 Query: 559 MWVIEHTLQFMAENRAK--MPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFE 616 WV+E +A A+ M A+N+S +A F V ++ + +L E Sbjct: 841 SWVLEAACAQLARWAARPDMAHLTIAVNVSVQQFRKADFVDNVLTIIGRTGARPDRLKLE 900 Query: 617 VTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNI 676 +TES + NV+ + L+ G A+DDFG GY+S + LK + D LKID SF+R++ Sbjct: 901 LTESVLVDNVQDIIEKMSALKAKGIVFALDDFGIGYSSLSYLKRLPLDQLKIDRSFVRDV 960 Query: 677 VSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDT 736 + +S D I +I LAR + V+AE VE E R+ + + G QGY +P P+ D Sbjct: 961 LVDSNDAVIARTIVALARSLGLGVIAEGVETEAQRDFLAAAGCYAYQGYYFCRPLPIEDF 1020 Query: 737 LNEI 740 + Sbjct: 1021 EALL 1024 Score = 41.9 bits (98), Expect = 0.086, Method: Composition-based stats. Identities = 6/51 (11%), Positives = 16/51 (31%), Gaps = 2/51 (3%) Query: 277 SIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQ 327 + + + + IT S F + + T ++ V ++ Sbjct: 426 EFRCVRKDGSLMWLSASWVPITDSKGEFIGFRTSGRDI--TERKQVEAELR 474 >UniRef50_Q39R25 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Bacteria RepID=Q39R25_GEOMG Length = 905 Score = 749 bits (1936), Expect = 0.0, Method: Composition-based stats. Identities = 109/531 (20%), Positives = 206/531 (38%), Gaps = 26/531 (4%) Query: 232 MPLNEKSTIFSTNYTLSLLL---PLMMWGAMRYGYKLISLLWAVVLMIS----IHSYQNY 284 + + T Y + ++ P + G R +L L+ A + +Y+ Sbjct: 357 IIYVNPAFERITGYGVDEVIDKNPRFLRGDDRDQAELKKLVQAFKEEREGCFVLRNYRKD 416 Query: 285 IPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRAL 344 + + +V ++I + T R ++ A DP+ LPN L Sbjct: 417 GSPFWNELFIAPVRDRDGVVTNYIGVMNDI--TEHRRYEEQLVYQATHDPLTGLPNRNLL 474 Query: 345 NRAL---------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGE 395 L R + +L + + + G + + +++ L L G+ Sbjct: 475 QDRLGQALALEAFRRRNPICVMFLDLDNFKKVNDTLGHTVGDMLLKAVANRLKNCLRGGD 534 Query: 396 DVYQLSGNDLALRLNTESHQERITALDSHLK---QFRFFWDGMPMQPQIGVSYCYVRSPV 452 V +L G++ + L + + + G + + + Sbjct: 535 TVARLGGDEYIIVLPNVREVPDVITVAKKMINVFAAPLLLMGNEIYVTASIGIALFPTDG 594 Query: 453 NHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLM 512 + LL + A + +N + + + + +++++ L +A+++ F L Sbjct: 595 ETVDALLKNAD--AAMYHAKEQGKNNYQFYSAEMNIRVFERLSLETSLHRAVKNQEFLLH 652 Query: 513 AQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMA 570 QP +R E L+R L+SP F+P+A E GL + WV+ Sbjct: 653 YQPRVDLRNGRICGVEALVRWNHPEMGLVSPAKFIPLAEETGLIVPMGEWVLRTACAQNK 712 Query: 571 ENR-AKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQA 629 + A +P R A+NLS Q V ++L + + L E+TES + +++ Sbjct: 713 AWQDAGLPPLRMAVNLSARQFRQENLIAMVEEILMETGLAPQWLELELTESLVMQEAEKS 772 Query: 630 QITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASI 689 L+ L + G ++AIDDFGTGY+S + LK LKID +FIR++ + D +V +I Sbjct: 773 AAILRELTDRGIEVAIDDFGTGYSSLSYLKRFPIANLKIDQAFIRDMTRDPDDATLVKTI 832 Query: 690 CHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEI 740 +A M +AE VE E + + + MQGY +P + + Sbjct: 833 ITMAHGLGMKTIAEGVELAEQIDFLCRHQCEEMQGYYFSRPITAEELGRLL 883 Score = 45.4 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 3/54 (5%), Positives = 14/54 (25%), Gaps = 2/54 (3%) Query: 273 VLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRI 326 + + + + + I S I + + ++ + + Sbjct: 280 ITDVELRRRRKDGSPIDVSLSAAPICDGSGTPLGVITIISDI--SARKRNEQEL 331 >UniRef50_Q21SZ9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=Q21SZ9_RHOFD Length = 1169 Score = 749 bits (1934), Expect = 0.0, Method: Composition-based stats. Identities = 121/533 (22%), Positives = 211/533 (39%), Gaps = 30/533 (5%) Query: 236 EKSTIFSTNYTLSLLLP--LMMWGAMRYGYKLISLLWAVV-----LMISIHSYQNYIPIY 288 ++ T Y+ ++ + + R+ + +W + I + + Y Sbjct: 640 NRAFTEITGYSADEVVGHNPRLLQSGRHDKAFYAAMWESIRRTGSWQGEIWNRRKNGEAY 699 Query: 289 PGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL 348 P + + + +V ++ +M + TR++A I+ LA+ D LPN R L L Sbjct: 700 PELLSITAVKENGGIVTHYVGTFMDI--TRRKAAEDEIRNLAFFDLQTGLPNRRLLLDRL 757 Query: 349 --------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQL 400 R AL + + + L G Q+++ L+ + G V +L Sbjct: 758 QQALAASARHRRQGALLLIDLDNFKTLNDTLGHDKGDLLLQQVAQRLASCVHEGGTVARL 817 Query: 401 SGNDLALRLNTES-----HQERITALDSHLKQ---FRFFWDGMPMQPQIGVSYCYVRSPV 452 G++ + L S + L + + DG Q + Sbjct: 818 GGDEFVVMLENLSEHLEAAATQAETLAKRILASLKQTYSLDGYEYQSTASIGITLFSEQQ 877 Query: 453 NHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLM 512 LL + + N R +Q + + A+ L++A+ + F L Sbjct: 878 ETTEDLLKRADLA--MYQAKAVGRNTLRFFDPEMQAVVTSRAALEAGLRRAVTSDEFLLY 935 Query: 513 AQPITGMRGD-VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAE 571 Q +G E LLR + L++P F+ +A + GL + WV++ +A+ Sbjct: 936 YQAQVDGQGHLTGCEALLRWQHPERGLVAPGEFIALAEDTGLILPLGRWVLDAACTQLAQ 995 Query: 572 N--RAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQA 629 R +M A+N+S QA F +V +L +L E+TES + +V+ Sbjct: 996 WATRPEMAHLTVAVNVSVRQFHQADFVNQVLTVLDSTGTNPQRLKLELTESLLIGDVEDV 1055 Query: 630 QITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASI 689 + L+E G ++DDFGTGY+S + LK + D LKID F+RNI+ + D I + Sbjct: 1056 IAKMSILKEKGVGFSLDDFGTGYSSLSYLKRLPLDQLKIDQGFVRNILIDPNDAAIARMV 1115 Query: 690 CHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEP 742 L + V+AE VE E R+ + LG QGYL +P PL + Sbjct: 1116 IALGDSLGLAVIAEGVEIEAQRDFLARLGCHACQGYLFCRPLPLDQFEAFVRR 1168 >UniRef50_C6NZE4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZE4_9PROT Length = 727 Score = 747 bits (1931), Expect = 0.0, Method: Composition-based stats. Identities = 123/534 (23%), Positives = 220/534 (41%), Gaps = 30/534 (5%) Query: 236 EKSTIFSTNYTLSLLLP--LMMWGAMRYGYKLISLLWAVV-----LMISIHSYQNYIPIY 288 + T Y + + + R+ + +W + I + +Y Sbjct: 198 NPAFTRITGYQSEEVQGRNPHLLASGRHDHTFYREMWDDILANGHWEGEIWDRRKNGEVY 257 Query: 289 PGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL 348 P + + S + ++ + V T+++ +I +LA+ DP+ LPN R LN L Sbjct: 258 PSWMNINPVRDISGNLLYYVGIFSDV--TKRKEAEAQIHQLAFYDPLTELPNRRLLNERL 315 Query: 349 --------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQL 400 R A+ +L + + L G + Q +++ L+ + G+ V +L Sbjct: 316 QQAFSVGARSGHHGAVLFLDLDNFKTLNDTKGHDIGDQLLIEVAKRLNSCVRNGDTVARL 375 Query: 401 SGNDLALRLNTESHQERITA-----LDSHLK---QFRFFWDGMPMQPQIGVSYCYVRSPV 452 G++ + L + S A + ++ + + + R Sbjct: 376 GGDEFVVVLESLSSVPDEAATQADLVAEKIRYALSQPYQLANHVHRTTPSIGVVMFRGHQ 435 Query: 453 NHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLM 512 + +L +T + A N R +Q ++ + + L+Q +E N L Sbjct: 436 QSLEEVLKFADTA--MYQAKTAGRNAIRFYDPVMQASIEARAELEEELRQVVERNQLRLY 493 Query: 513 AQPITGMRGD-VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAE 571 Q + E+LLR + L+SP F+P+A E G I +WV++ + Sbjct: 494 YQVQMDSSNRPLGAEVLLRWQHPERGLVSPAQFIPMAEETGHIVPIGLWVLQTACTQLKV 553 Query: 572 NRAK--MPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQA 629 ++ A+N+S F +V + LA+ + L E+TES L NV+ Sbjct: 554 WQSDPLTCDLTLAVNVSAKQFRSMDFVSQVQRTLAQSGAKPSLLKLELTESLVLENVEDT 613 Query: 630 QITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASI 689 ++ L+ LG ++DDFGTGY+S LK + D +KID SF+R+I S+S D IV +I Sbjct: 614 IAKMRELKLLGVSFSMDDFGTGYSSLQYLKRLPLDQIKIDQSFVRDIASDSNDAAIVQTI 673 Query: 690 CHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPI 743 ++ + + V+AE VE E RE + G QGYL G+P PL + + Sbjct: 674 IAMSEVLGLNVIAEGVETEAQREFLDLRGCHAFQGYLFGRPAPLAEFEAILRKA 727 >UniRef50_C6P464 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P464_9PROT Length = 1347 Score = 747 bits (1931), Expect = 0.0, Method: Composition-based stats. Identities = 120/533 (22%), Positives = 213/533 (39%), Gaps = 26/533 (4%) Query: 232 MPLNEKSTIFSTNYTLSLLLPL--MMWGAMRYGYKLISLLWA-----VVLMISIHSYQNY 284 + ++ + YT S LL + + R +WA + + + Sbjct: 813 ILAANQAYADISGYTESELLGQNPRILNSGRQSRDFYRKMWANIKEAGSWQGELWNRRKN 872 Query: 285 IPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNV--- 341 IYP + + + ++ + ++ R + LA+ DP+ LPN Sbjct: 873 GEIYPTWLAVSAVRNDQGKATHYVGISSDL--SQLRQTEAEREHLAHYDPLTDLPNRLLL 930 Query: 342 -----RALNRALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGED 396 AL +A R + YL + + + + G + + L+ L+ + + Sbjct: 931 RSHLTHALAQAKRHHNQVGVLYLDLDRFKNINDSLGYQVGDELLVTLTERLTMHMRSEDL 990 Query: 397 VYQLSGNDLALRLNTESHQERITALDSHLKQ---FRFFWDG-MPMQPQIGVSYCYVRSPV 452 + +L G++ L L + E + L + F G + + + Sbjct: 991 LARLGGDEFLLVLEHINEPEDSAIVARSLLETLAQPFVLHGEREIFIGASIGISIFPNDG 1050 Query: 453 NHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLM 512 + L+ + A + N L R + + + NRL+ A+ N + Sbjct: 1051 DSAEQLIQHAD--AAMHQAKTLGRNTYHFYTEDLSRASNEHLELENRLRHAITANQLRVY 1108 Query: 513 AQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMA 570 QP + + E L+R + L+ P F+P+A E GL +I WV++ T Sbjct: 1109 YQPQVDIATGHIIGAEALVRWQDPERGLVQPGQFIPLAEETGLIGAIGEWVLKETCLQGM 1168 Query: 571 EN-RAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQA 629 A +P A+NLSP + +S++LA+ A +L E+TES + + Sbjct: 1169 RWIDAGLPFLTLAVNLSPHQFLRGNIAGLISKVLAETGFPADRLELELTESALMQQGEDV 1228 Query: 630 QITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASI 689 L L+ ++AIDDFGTGY+S + LK D+LKID SF+ +I + D +I A+I Sbjct: 1229 IKMLHLLRAQDIRLAIDDFGTGYSSLSYLKRFPLDILKIDKSFVDDIPFHQDDMEIAATI 1288 Query: 690 CHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEP 742 + + V+AE VE E E + + G D QGYL P P + ++ Sbjct: 1289 IAMGHILGFKVLAEGVETREQLEFLQARGCDLYQGYLTSPPIPAEEFEKLLKE 1341 >UniRef50_A1SZA9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=6 Tax=Psychromonas ingrahamii 37 RepID=A1SZA9_PSYIN Length = 777 Score = 746 bits (1927), Expect = 0.0, Method: Composition-based stats. Identities = 121/547 (22%), Positives = 223/547 (40%), Gaps = 32/547 (5%) Query: 223 LGALLLLLCMPLNEKSTIFSTNYTLSLLLPL--MMWGAMRYGYKLISLLWAVV-----LM 275 + LC+ K+ + Y+ ++ ++ + R +W + Sbjct: 235 MFVTDANLCILRVNKAFTNISGYSGEEVIGQSPKLFNSGRQDKAFYKEMWNSINTTDAWR 294 Query: 276 ISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPV 335 + + IY T + +V +++ + + + +A +I LAY DP+ Sbjct: 295 GEVSNRSKSGDIYAKNLTITAVRDGKGVVSNYVATFRDITTS--KAASEKINNLAYFDPL 352 Query: 336 VHLPNVRALNRALRD--------APWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWL 387 LPN R L +LR AL +L + + L G + Q+++ L Sbjct: 353 TQLPNRRMLLDSLRHVLTISARSNQHCALLFLDLDNFKTLNDTLGHDVGDLLLQQVATRL 412 Query: 388 SPLLEPGEDVYQLSGNDLALRLNTESHQE---------RITALDSHLKQFRFFWDGMPMQ 438 + + G+ V +L G++ + L S Q + L Q+ + + Sbjct: 413 TDCVREGDIVARLGGDEFVVLLENLSLQAIEAANKAKKVAKKIIFELAQY-YQLNMHRYH 471 Query: 439 PQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMN 498 + I LL + + + A N +Q + + M Sbjct: 472 STTSIGVTIFSGNETGIEELLKQADIA--MYQSKAAGRNTWHFFNKTMQESIIARADMER 529 Query: 499 RLQQALEHNHFFLMAQPITGMRGDV-YHEILLRMKGENDELISPDSFLPVAHEFGLSSSI 557 L++A+E N F L Q G E L+R + +SP +F+P+A E GL I Sbjct: 530 DLRKAIEDNQFQLHYQAQVSSSGQTLGAEALIRWQHPERGQVSPFNFIPLAEETGLILPI 589 Query: 558 DMWVIEHTLQFMAENRAK--MPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIF 615 WV++ + + A+N+S + Q F +V L ++ I +L Sbjct: 590 GQWVLDSACAQLKAWQKNPLTQDLVLAVNISAKQLHQEDFVEQVKATLKRHDINPARLKL 649 Query: 616 EVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRN 675 E+TES + N+ + L ++G ++DDFGTGY+S LK + + +KID SF+R+ Sbjct: 650 ELTESMLVENISDIITKMNILSKIGISFSLDDFGTGYSSLQYLKKLPLNQIKIDQSFVRD 709 Query: 676 IVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLID 735 +++++ D IV +I ++ + V+AE VE E R+ +L G + QGYL KP P+ + Sbjct: 710 LITDASDRAIVRTIITMSHSLDISVIAEGVETVEERQYLLDNGCTHYQGYLFSKPVPINE 769 Query: 736 TLNEIEP 742 ++ Sbjct: 770 FEVLLKK 776 >UniRef50_C6NZ79 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZ79_9PROT Length = 923 Score = 745 bits (1925), Expect = 0.0, Method: Composition-based stats. Identities = 122/532 (22%), Positives = 210/532 (39%), Gaps = 26/532 (4%) Query: 232 MPLNEKSTIFSTNYTLSLLLPL--MMWGAMRYGYKLISLLWAVV-----LMISIHSYQNY 284 + S + + Y ++ M + R+ + +W + I Sbjct: 392 VVAVNHSFVAMSGYRSEEVMGKNPRMLSSGRHDAEFYRAMWDDINQHGYWQGEIWDKHKS 451 Query: 285 IPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRAL 344 IYP + + + V ++I T Q + I LAY D + LPN L Sbjct: 452 GRIYPKWMSITAVRDEHGKVVNYISIARD--TTEQTEAEKNIHFLAYYDVLTGLPNRTLL 509 Query: 345 NRAL--------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGED 396 L RD +L +L + + + + G + + Q ++ + + G+ Sbjct: 510 RDRLGQMIAVAHRDKHQFSLIFLDLDRFKYINDSMGHSVGDRLLQSVALRIQDCVREGDT 569 Query: 397 VYQLSGNDLALRLNTESHQERITALDSHLK---QFRFFWDGMPMQPQIGVSYCYVRSPVN 453 V +L G++ + L + + + + L + DG + Q + Sbjct: 570 VARLGGDEFIVLLRE-AGESAASVVAQKLLIALATPYDLDGQVISTQASIGISIYPDQAQ 628 Query: 454 HIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMA 513 L+ + + N + + + +M L+ ALE FL Sbjct: 629 DADTLIKNADMA--MYRAKEEGRNNFQFFVPEMNFRVDLLFSMEKDLRLALERGELFLQY 686 Query: 514 QPITGMRGDV--YHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAE 571 QP + E L+R +SP F+PVA E G +I WV+ MAE Sbjct: 687 QPQADLASGTLSGVEALIRWDHPVKGQVSPAEFIPVAEETGQIVAIGEWVLRTACSQMAE 746 Query: 572 NRA-KMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQ 630 R M A+NLS + Q + +L + ++A L E+TE + + + A Sbjct: 747 WRKTGMHDLTIAVNLSIRQLRQPDLAELIKSVLLETGLDARHLELEITEGIMMGDNQAAF 806 Query: 631 ITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASIC 690 L +Q+LG Q++IDDFGTG++S LK + + LKID SFIR+I ++ D I+ SI Sbjct: 807 RFLSEMQDLGVQLSIDDFGTGFSSLNYLKQMPVNKLKIDQSFIRDIETDEGDAAIIRSII 866 Query: 691 HLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEP 742 L + V+AE VE +E + + G D +QGY +P D + ++ Sbjct: 867 SLGHRLNLRVIAEGVETQEQLDFLRIRGCDEIQGYFYSRPLLAEDFMRFVKA 918 >UniRef50_C6MMM5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. M18 RepID=C6MMM5_9DELT Length = 1097 Score = 745 bits (1925), Expect = 0.0, Method: Composition-based stats. Identities = 109/568 (19%), Positives = 219/568 (38%), Gaps = 27/568 (4%) Query: 201 SQLKQQVDAKVTKKEFALWLLALGALLLLLCMP--LNEKSTIFSTNYTLSLLLP--LMMW 256 + ++ + + + + L L P + T Y S +L + Sbjct: 394 HRDAEEALRQRQRAIDSSSNGIMITDALELDHPIIYVNPAFERITGYAASEVLGRNPRLL 453 Query: 257 GAMRYGYKLISLLWAVVLMI-----SIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNY 311 + + ++ + + + +Y+ ++ + + +++ V +++ Sbjct: 454 CSGDREQLGLEVIRVALCELREGHAELRNYRKDGSLFWNALSVSPVLNAAGEVTNYVGIV 513 Query: 312 MAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL--------RDAPWSALCYLRIPG 363 + T ++ +++ + D + LPN L + R +A+ ++ + Sbjct: 514 NDI--TERKRYEEQLEYQSNHDGLTGLPNRNLLGDRIGQALTYAERYQRQTAVFFIDLDH 571 Query: 364 MEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDS 423 + + + G + + Q + LS + + V + G++ + L+ + E + Sbjct: 572 FKFINDSLGHDMGDKLLQIAARRLSECVRSIDTVARHGGDEFVIVLSDLAVSEDAAKVAR 631 Query: 424 HLKQF---RFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQR 480 ++ + + + +LL + + N + Sbjct: 632 KIQDAVCRPYQIGEHELVVSCSTGISLYPKDGSDAQVLLKNADVA--MYRAKQCGRNNFQ 689 Query: 481 RGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDEL 538 L + ++ M L++ALE + F + QP + E L+R + Sbjct: 690 FYTGDLNDIVLARLTMEKYLRRALERDEFLVHYQPKVDLLSGRITGMEALVRWQSPELGF 749 Query: 539 ISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRA-KMPAHRFAINLSPTSVCQARFPV 597 ISP SF+P+A E GL +I WV+ + +P A+NLSP Q Sbjct: 750 ISPASFIPLAEETGLIVAIGEWVLRTACAQNKAWQDDGLPPMVVAVNLSPRQFRQEDLAD 809 Query: 598 EVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYAR 657 V ++ + + + EV ES + +V A L L+ELG Q+ +DDFGTGY+S + Sbjct: 810 TVHRIAEETGLAPRYIELEVVESLLMDDVDGAVAMLDALKELGVQLTMDDFGTGYSSLSY 869 Query: 658 LKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSL 717 LK D++KID SF+R+I + IV ++ LA + VVAE +E E + L Sbjct: 870 LKRFPFDMMKIDQSFVRDITRDPGSAAIVRTVISLAHTLNLRVVAEGIETEGQLGYLRGL 929 Query: 718 GIDYMQGYLIGKPQPLIDTLNEIEPIRE 745 D MQG+ +P P + + R Sbjct: 930 ACDEMQGFYFSRPVPAAEFEQMLRDQRH 957 >UniRef50_C7RNA9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RNA9_9PROT Length = 1399 Score = 745 bits (1925), Expect = 0.0, Method: Composition-based stats. Identities = 110/529 (20%), Positives = 208/529 (39%), Gaps = 28/529 (5%) Query: 236 EKSTIFSTNYTLSLLLPL--MMWGAMRYGYKLISLLWAVV-----LMISIHSYQNYIPIY 288 + T Y + + + R + +W + + + Y Sbjct: 872 NDAFCRLTGYAADEVRGSDPRLLSSGRTSAEEYRTMWQAINSTGHWQGEVWDRRKDGSYY 931 Query: 289 PGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNV------- 341 P + + TI + +I +++ + + ++A +I LA+ D + LPN Sbjct: 932 PKWLSISTIRGAEGNTEYYIGSFVDI--SERKAAEEKISHLAHFDTLTDLPNRSNLQGRL 989 Query: 342 -RALNRALR--DAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVY 398 +AL A R A+ +L + + + G + +++ L + + V Sbjct: 990 DQALASARREGHGRSVAVMFLDLDRFKNINDTLGHHVGDALLLEVAARLRSSVRDSDVVA 1049 Query: 399 QLSGNDLALRLNTESHQERITALDSHLKQF---RFFWDGMPMQPQIGVSYCYVRSPVNHI 455 +L G++ + L + + + + + +G + + + + Sbjct: 1050 RLGGDEFVVVLTG-ADALAAERVAGKILKALSRAYQIEGHALHSTSSIGIAVFPADGESV 1108 Query: 456 YLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQP 515 +L+ + A + +A N + + D+ + L AL+ F L QP Sbjct: 1109 EVLMQNAD--AAMYHAKSAGRNNVQFFTASMNEAASDRRQLEEDLHLALQQKQFVLHYQP 1166 Query: 516 ITGMRGDV-YHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAEN-- 572 + V E LLR + + L+ P F+P+A + GL I WV+E + Sbjct: 1167 QVDAQRRVFAVEALLRWQHPHHGLVPPARFVPLAEDTGLIVPIGQWVLETACAQIKAWSV 1226 Query: 573 RAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQIT 632 A+ + A+N+S Q F + Q + +L E+TES L NV Sbjct: 1227 DARTRKLQVAVNVSARQFRQPDFVELLRQAIDNSGANPARLKLELTESLVLDNVADTIDK 1286 Query: 633 LQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHL 692 + ++ LG ++DDFGTGY+S + L + D LKID +F+ + N D I +I + Sbjct: 1287 MNAIKLLGVTFSMDDFGTGYSSLSYLTRLPLDQLKIDRAFVCRLPENRSDAVIAQTIVTM 1346 Query: 693 ARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIE 741 R + VVAE VE E R+ + S G D QG+L +P + + ++ Sbjct: 1347 GRSLGLKVVAEGVETEAQRQFLDSHGCDGYQGFLFSRPLAVDAFEDFLQ 1395 Score = 79.7 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 16/149 (10%), Positives = 37/149 (24%), Gaps = 31/149 (20%) Query: 230 LCMPLNEKSTIFSTNYTLSLLLPL--MMWGAMRYGYKLISLLWAVVLMISIH-----SYQ 282 + S T Y+ + + + LW +L + + + Sbjct: 615 AEIEYVNPSFTRVTGYSRLEAIGQNPRILQSGEAPSDTYRSLWQTLLEGKVWTGLFHNRR 674 Query: 283 NYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQ--RLAYVDPVVHLPN 340 ++ + I V ++ V T + + +Q A+ Sbjct: 675 KNGELFWEKASIAPIIGDHGEVTHYLAVKEDV--TERLRADKLLQESEEAF--------- 723 Query: 341 VRALNRA------LRDAPWSALCYLRIPG 363 R A L+D ++ Sbjct: 724 RRLFEDAKDPLLLLKDGS-----FIDCNR 747 >UniRef50_C3X2S2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Oxalobacter formigenes RepID=C3X2S2_OXAFO Length = 1049 Score = 745 bits (1924), Expect = 0.0, Method: Composition-based stats. Identities = 127/602 (21%), Positives = 240/602 (39%), Gaps = 42/602 (6%) Query: 174 VGNLIGVPLCY-------------FIIRVVRNPFYLRSYYSQLKQQVDAKVTKKEFALWL 220 GN+IGV Y ++ +V + + + + ++Q+ + Sbjct: 448 NGNVIGVMFFYSNVLNAFTESSQRLLLELVEDIDFALE-HFEKEEQLQLSAQIFAQSSEG 506 Query: 221 LALGALLLLLCMPLNEKSTIFSTNYTLSLLLP--LMMWGAMRYGYKLISLLWAVV----- 273 + L + M + T Y+ L M + ++ + +W + Sbjct: 507 IMLLDPNCHIVM--VNSAFTHITGYSEEETLGRNPKMLASGQHDRNFYATMWEAIETEGR 564 Query: 274 LMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVD 333 + + + +YP + T+ S + +I + + T ++ R+Q LA+ D Sbjct: 565 WQGEVWNRRKDGSLYPEWLLIQTMRDSRGTLTHYIGTFTDL--TERKETEERVQWLAHFD 622 Query: 334 PVVHLPNVRALNRA--------LRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSH 385 P+ LPN L+ R AL +L + + + + G + + ++ S Sbjct: 623 PLTGLPNRTLLHIRSNLAISLAQRRHEPLALMFLDLDNFKNVNDSLGHGVGDELLKQFSQ 682 Query: 386 WLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLKQF---RFFWDGMPMQPQIG 442 L + + + +L G++ L L + + L L ++ + + + Sbjct: 683 RLVNAVREQDTISRLGGDEFVLVLPG-TDTDGAAYLAERLLNIAARQYNIERHEINLTVS 741 Query: 443 VSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQ 502 + + L + A + + N +Q + + N L++ Sbjct: 742 IGIAMYPTDGTDFDTLWRSAD--AAMYRAKQSGRNDYCFFTTEMQARSARTLQIDNALRR 799 Query: 503 ALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMW 560 ALE N F L+ QP + + V E L+R PD F+P+A G I W Sbjct: 800 ALERNQFSLVYQPQLSLNTNRIVGFEALIRWTHPQFGNTPPDEFIPIAESNGQIIPIGEW 859 Query: 561 VIEHTLQFMAENRA-KMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTE 619 V++ ++ + + + ++NLS R P V +L + + L E+TE Sbjct: 860 VLKTAVRQLRLWQDNGLKDVTISVNLSAVQFRHPRLPELVMAILEEAGVSPECLQLELTE 919 Query: 620 SNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSN 679 A+ N A + L++ G +I+IDDFGTGY+S LK N LKID SF++++ ++ Sbjct: 920 GVAMENPLAAITVIDELRKKGIRISIDDFGTGYSSLTYLKRFNVYSLKIDRSFVQDLPND 979 Query: 680 SLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNE 739 + D IV+++ LA M+ VAE VE +E E + S G +QGY + +P + Sbjct: 980 TEDMAIVSAVISLADSLGMITVAEGVETKEQLEFLRSRGCTEIQGYYLSRPLQADAVFSF 1039 Query: 740 IE 741 IE Sbjct: 1040 IE 1041 >UniRef50_A0LKD9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LKD9_SYNFM Length = 844 Score = 744 bits (1923), Expect = 0.0, Method: Composition-based stats. Identities = 116/519 (22%), Positives = 206/519 (39%), Gaps = 25/519 (4%) Query: 243 TNYTLSLLLPL--MMWGAMRYGYKLISLLWAVV-----LMISIHSYQNYIPIYPGYTTQL 295 T Y ++ + + + + +WA + I + + I+P + T Sbjct: 316 TGYADHEVVGKNPRLLKSGNHHEEFYRAMWATLSSTGQWQGEIWNRRKNGDIFPAWLTLC 375 Query: 296 TITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL------- 348 + +S + +++ + T ++ R+ A D + LPN + L Sbjct: 376 AVRNSEDKITNYVGISRDI--TLRKEAEERLSYQASHDALTGLPNRARFHDRLTHALARA 433 Query: 349 -RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLAL 407 RD A+ +L + +++ G + Q ++ L + + + G++ + Sbjct: 434 GRDRHEFAILFLDLDRFKVINDTLGHTVGDFLLQGVTKRLLGGTRESDTLARWGGDEFII 493 Query: 408 RLNTESHQERITALDSHLKQF---RFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNT 464 L + E + F G + + + LL + Sbjct: 494 LLESIRGAEDAAVAARRILDVLAEPFSVQGHEVFVSGSIGISVYPRDGEDVQALLRCADI 553 Query: 465 VAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD-- 522 + ++ +N + + +++ + L+ AL+ N F L QP + Sbjct: 554 A--MYRAKDSGKNDYQFYESTMSTGGLERLKLEGDLRYALKRNEFVLHYQPRVNINTGLI 611 Query: 523 VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENR-AKMPAHRF 581 V E L+R + L+ P F+P+A E G I WV+ + + A +P R Sbjct: 612 VGAEALIRWDLPDRGLLWPLDFIPLAEESGFIIPIGEWVLRTACLQCRKWQDAGVPHPRV 671 Query: 582 AINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGC 641 ++NLS + V ++L + + L E+TES + N+++A TLQ L ELG Sbjct: 672 SVNLSTHQFKKDNLTSTVDRILKETGLSPGLLELEITESAMMENLEKAVATLQGLAELGV 731 Query: 642 QIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVV 701 +AIDDFGTGY+S LK LKID SF+R+I SN D I SI L + + VV Sbjct: 732 NVAIDDFGTGYSSLGYLKRFPIGALKIDQSFVRHIPSNIDDTAIAMSIISLGKTLNLKVV 791 Query: 702 AEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEI 740 AE VE +E + + D QGYL +P + Sbjct: 792 AEGVETQEQLTVLRNYQCDEAQGYLFSQPVDADRMTEFL 830 Score = 41.9 bits (98), Expect = 0.084, Method: Composition-based stats. Identities = 6/50 (12%), Positives = 15/50 (30%), Gaps = 2/50 (4%) Query: 282 QNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAY 331 I T + ++ + FI + T ++ ++ A Sbjct: 240 HKDGRIIWTKLTLSPMKDAAGVPKYFIHIVEDI--TERKNFEDNLRLSAT 287 >UniRef50_Q5P5U6 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P5U6_AZOSE Length = 740 Score = 742 bits (1918), Expect = 0.0, Method: Composition-based stats. Identities = 119/531 (22%), Positives = 215/531 (40%), Gaps = 24/531 (4%) Query: 232 MPLNEKSTIFSTNYTLSLLLP--LMMWGAMRYGYKLISLLWA-----VVLMISIHSYQNY 284 + ++ T Y+ +L + + R+ +W+ I + + Sbjct: 213 IVSVNRAFTTVTGYSADEVLGRNPKLLASGRHDRDFYREMWSAIERNGSWSGEISNRRKN 272 Query: 285 IPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRAL 344 IY + T + + S + + I Y + T QRA RIQ LA+ DP+ LPN L Sbjct: 273 GEIYNEWLTIHAVRNESGGIENCIAIYAEI--TDQRAAASRIQFLAHYDPLTLLPNRALL 330 Query: 345 NRAL--------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGED 396 + R+ +A+ +L + + + + G ++ Q+++ L + + Sbjct: 331 QDRMHQGLAHAAREGTRAAVLFLDLDRFKTINDSLGHLVGDHLLQEVAQRLKASVREDDT 390 Query: 397 VYQLSGNDLALRLNTESHQERITALDSHLKQF---RFFWDGMPMQPQIGVSYCYVRSPVN 453 V + G++ + L E+ + + + +G + + Sbjct: 391 VARRGGDEFIVMLPHVDSAEQAAHVAGKIIEAMEQTIPVNGYVLNVSFSIGISVFPDDAM 450 Query: 454 HIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMA 513 L+ + + + N + + +++A+ N L +A+E F LM Sbjct: 451 DPDTLIRNADIA--MYRSKASGRNQFQFFTADMNAHALERLALENDLHRAVERGEFRLMF 508 Query: 514 QPITGMRGDV-YHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAEN 572 QP G + E LLR + L++P F+PVA E GL I WV+E Q + Sbjct: 509 QPQFEGSGSIIGAEALLRWQHPQRGLVTPAEFIPVAEETGLIVPIGTWVLERACQQVRAW 568 Query: 573 R-AKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQI 631 R A + ++N+S Q + +LLA IE L E+TES + + Sbjct: 569 RDAGLKKITVSVNISALQFSQKNLLELIRRLLAVSNIEPGTLELELTESVLMHDHVATSG 628 Query: 632 TLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICH 691 + L+E+G ++AIDDFGTGY+S + L++ LKID SF+R++ I +I Sbjct: 629 LMSELKEMGVRMAIDDFGTGYSSLSYLRSFPISKLKIDQSFVRDLSDGGDAGAITGAIIG 688 Query: 692 LARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEP 742 LA+ M V+AE VE + + + D QG+ +P + Sbjct: 689 LAKNLNMRVIAEGVETAQQASFLQAQCCDEFQGHFFSQPVSPEKFAELLRA 739 >UniRef50_C1DBY5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=3 Tax=Neisseriaceae RepID=C1DBY5_LARHH Length = 839 Score = 742 bits (1918), Expect = 0.0, Method: Composition-based stats. Identities = 118/535 (22%), Positives = 207/535 (38%), Gaps = 25/535 (4%) Query: 231 CMPLNEKSTIFSTNYTLSLLLP--LMMWGAMRYGYKLISLLWAVV-----LMISIHSYQN 283 + + T + ++ + + + + LW + + + + Sbjct: 303 IIETVNPAFTRITGWRREEVVGKNPRILSSSQQPPEFYRHLWQSLREHGFWQGEVINRRK 362 Query: 284 YIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRA 343 Y + T I + + + T+++ R+ LA DP+ LPN Sbjct: 363 DGKFYTEHLTITGIRGPDGTFTHYAGIFSDI--TQRKLNEERLHYLANHDPLTDLPNRTL 420 Query: 344 LNRAL--------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGE 395 L L R AL +L + + + G + + Q ++ L+ L + Sbjct: 421 LMERLGAALTRAHRQGKRVALMFLDLDRFKFINDTLGHAVGDKLLQTVASRLTGSLRASD 480 Query: 396 DVYQLSGNDLALRLNTESHQERITALDSHLKQFR---FFWDGMPMQPQIGVSYCYVRSPV 452 V +L G++ + L + L DG + V Sbjct: 481 TVARLGGDEFNIVLEDIRDLRGVAQTAQKLIDRVQGMVTLDGHDVYVTASVGIAIYPDDG 540 Query: 453 NHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLM 512 + +L +T + +N + + ++ + + L +AL F L Sbjct: 541 STPEVLRMNADTA--MYRAKERGKNNFQFFTADMNASTLARLRLESNLHRALARQEFQLH 598 Query: 513 AQPITGMRGDV--YHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMA 570 QP + E LLR + +SP F+P+A E L S+I WV+E + Sbjct: 599 FQPKVDLAHGHIYGMEALLRWRSHELGPVSPADFIPIAEESNLISTIGEWVLEQACRQAR 658 Query: 571 EN-RAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQA 629 + A+NLS + Q V ++L + L E+TES A+ N + Sbjct: 659 HWLNLGLLPGTVAVNLSSKQMTQGDIVATVRRILEHSNLPGHYLELEITESVAMDNTGEM 718 Query: 630 QITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASI 689 TL++L+ LG +IAIDDFGTGY+S + LK + D+LKID SF+ ++ + D I ++I Sbjct: 719 IRTLKNLKALGVRIAIDDFGTGYSSLSYLKQLPIDVLKIDRSFVTDLHEDRDDAAIASAI 778 Query: 690 CHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIR 744 + + + VAE VE EE R+ +L G Y QGYL +P P + + Sbjct: 779 ISMGQSLNLQPVAEGVEREEHRQFLLDHGCQYGQGYLFSRPVPAATMEQLLLESQ 833 >UniRef50_C5V5K2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V5K2_9PROT Length = 925 Score = 742 bits (1917), Expect = 0.0, Method: Composition-based stats. Identities = 120/543 (22%), Positives = 214/543 (39%), Gaps = 30/543 (5%) Query: 231 CMPLNEKSTIFSTNYTLSLLLPL--MMWGAMRYGYKLISLLWAVV-----LMISIHSYQN 283 + + +T YT + + R+ + +W + I + Sbjct: 384 IILKVNQVFTATTGYTSEEAVGKTPSLLKTDRHSAEFYHEMWRQIKQTGKWQGEIWDKRK 443 Query: 284 YIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRA 343 IYP + S + +V ++ +Y + T ++ +I LA+ D + LPN R Sbjct: 444 NGEIYPKLLNIYAVKSKNGVVTHYVGSYTDL--TERKMAEEKIISLAFYDTLTGLPNRRL 501 Query: 344 LNRAL--------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGE 395 L L R AL ++ + + L G + ++++H L + + Sbjct: 502 LLDRLNYALASGLRTGKNGALLFIDLDKFKTLNDTLGHDIGDLLLKQVAHRLKACVREID 561 Query: 396 DVYQLSGNDLALRLNTE-----SHQERITALDSHLKQ---FRFFWDGMPMQPQIGVSYCY 447 V ++ G++ + L + + + + + + Sbjct: 562 TVARIGGDEFVVMLEDLNIESVEAAAQTEVIGEKILAALRMPYQLLTNEFHSSVSIGISL 621 Query: 448 VRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHN 507 + L + + + + N R +Q + + + L++AL + Sbjct: 622 FSNNGQSQDEPLKQADIA--MYQAKKSGRNKLRFFDQRMQDTISSRANLEAELRKALANE 679 Query: 508 HFFLMAQPITG-MRGDVYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTL 566 L Q + E+LLR + +ISP F+PVA E GL I +WV+E Sbjct: 680 QLQLHYQIQVDSAHQTIGAEVLLRWIHPVNGIISPAQFVPVAEETGLILPIGLWVLETAC 739 Query: 567 QFMAENRA--KMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALT 624 + + + AIN+S Q F EV ++ ++ I L E+TE L Sbjct: 740 AQLKKWQDNPATAQLILAINVSARQFHQNGFATEVRSVIERHDINPALLKLELTEGMLLN 799 Query: 625 NVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQ 684 N+ T++ LQE G Q ++DDFGTGY+S LK + LKID SF+R++ + D Sbjct: 800 NLDDTIATMRSLQEFGVQFSLDDFGTGYSSLQYLKRLPLAQLKIDQSFVRDLATGYNDQA 859 Query: 685 IVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIR 744 IV +I +A + V+AE VE E R+ +L + QGYL GKP P+ + + Sbjct: 860 IVRTIIAMAHSLNLNVIAEGVETEIQRQILLKNQCSHFQGYLFGKPMPIEQFESLLSSDS 919 Query: 745 ESA 747 +A Sbjct: 920 TAA 922 >UniRef50_C6P1Q1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1Q1_9PROT Length = 1135 Score = 742 bits (1916), Expect = 0.0, Method: Composition-based stats. Identities = 128/599 (21%), Positives = 245/599 (40%), Gaps = 32/599 (5%) Query: 175 GNLIGVPLCYFIIRVVRNPFYLRSYYSQLKQQVDAKVTKKEFALWLLALGALLLLLCMPL 234 G +I V + + +++ P S +++ + + G L+ + Sbjct: 538 GTVIDVEISGYPLQLHGKPALFNSSRDITERKKIEVEIQIAATAFEAQEGMLITDADRNI 597 Query: 235 NEKSTIF--STNYTLSLLLP--LMMWGAMRYGYKLISLLWAVV-----LMISIHSYQNYI 285 + F T Y+ ++ + + + + +W + I + + Sbjct: 598 LRVNRAFTDITGYSAEEVIGKNPRILSSGLHDSHFYAAMWNTLVATGAWKGEIWNKRKNG 657 Query: 286 PIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALN 345 +YP + + +V +++ + + T +A I+ LA+ DP+ LPN R L Sbjct: 658 EVYPERLAITAVKDARGVVINYVASLSDI--TLHKAAEDEIRSLAFFDPLTGLPNRRLLM 715 Query: 346 RAL--------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDV 397 L R AL +L + + L G + Q+++ L + G+ V Sbjct: 716 DRLQQALVASSRSGKAGALLFLDLDNFKNLNDTLGHDIGDLLLQQVAQRLKNCVREGDTV 775 Query: 398 YQLSGNDLALRLNTESHQERITALDSHL--------KQFRFFWDGMPMQPQIGVSYCYVR 449 ++ G++ + L S + A + + + + + Sbjct: 776 ARIGGDEFVVMLEDLSAESIEAASQTEAVGWKIISTLNKPYHLEKFEVHSTPSIGATLFD 835 Query: 450 SPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHF 509 S I L + + + A N R +Q L + A+ L++++E F Sbjct: 836 SRPQIIDDLFKQADIA--MYQAKKAGRNTMRFFDPQMQDTLNTRTALEADLRKSIERREF 893 Query: 510 FLMAQPITG-MRGDVYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQF 568 L Q M V E L+R ++SP F+P+A E L +I +WV++ Sbjct: 894 NLFYQIQVDEMNRPVGAEALIRWIHPKRGMVSPAEFIPLAEETDLILNIGLWVLQEACAQ 953 Query: 569 MAENRAK--MPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNV 626 + + A+N+S Q+ F +V + KY I+ +L E+TES N+ Sbjct: 954 LKTWQNNPLTRNLVLAVNVSAKQFRQSDFATQVRVFVEKYAIDPSKLKLELTESMLQENI 1013 Query: 627 KQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIV 686 + + + L+E+G Q ++DDFGTGY+S +K + + LKID SF+ ++ + D IV Sbjct: 1014 EDTILIMNALKEIGVQFSLDDFGTGYSSLQYIKKLPLNQLKIDQSFVHDLDFDRDDKAIV 1073 Query: 687 ASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIRE 745 +I +A+ ++ V+AE VE +E R+ +L+ G + QGYL KP P+ + +E E Sbjct: 1074 RAIIAMAKSLQLDVIAEGVETQEQRQLLLNKGCTHFQGYLFSKPLPIREFDALLERAIE 1132 Score = 89.3 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 16/163 (9%), Positives = 49/163 (30%), Gaps = 9/163 (5%) Query: 172 LLVGNLIGVPLCYFIIRVVRNPFYLRSYYSQLKQQVDAKVTKKEFALWLLALGALLLLLC 231 L+ +I V L ++ + ++ + + + ++ F A+ L Sbjct: 292 TLLAVVIPVLLAISLLAMAFYRRLAQNEAQRREAERLQRINATVFDSSAEAIIITDLNAN 351 Query: 232 MPLNEKSTIFSTNYTLSLLLP--LMMWGAMRYGYKLISLLWAVV-----LMISIHSYQNY 284 + + T Y+ +L + + + LW + + + Sbjct: 352 IISVNPAFTQITGYSPEDVLGKNPRILSSGQQSKGFYRELWEALLRDNFWQGELVNRHKN 411 Query: 285 IPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQ 327 +Y + + + + FI + T ++ ++ Sbjct: 412 GSLYNIHLSISASRDGTGQLQHFIGVTTDI--TERKQHESELR 452 >UniRef50_Q47IA0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47IA0_DECAR Length = 925 Score = 741 bits (1913), Expect = 0.0, Method: Composition-based stats. Identities = 125/582 (21%), Positives = 231/582 (39%), Gaps = 33/582 (5%) Query: 189 VVRNPFYLRSYYSQLKQQVDAKVTKKEFALWLLALGALLLLLCMPLNEKSTIFSTNYTLS 248 VV P Y Q + + + + + + + + + I +TN + Sbjct: 319 VVFGPQGEFICYEGTVQDISERKRTEAHLQLMAMVFSNSNEAIIVTDASNRIIATNPAFT 378 Query: 249 LLLP----------LMMWGAMRYGYKLISLLW-----AVVLMISIHSYQNYIPIYPGYTT 293 L + A ++ S +W + + YP + + Sbjct: 379 CLTGYQPDDVIGKNPRILSAGTTPTEVFSDMWTCLHREGAWQGELWDRKKNGEAYPKWLS 438 Query: 294 QLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL----- 348 + + + I +++ + + +A RI+ LA+ D + +L N +L+ L Sbjct: 439 ISLVRDEDGQIRNHIGSFIDI--SELKATQERIRHLAHHDTLTNLANRFSLHEKLAQALA 496 Query: 349 ---RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDL 405 R+ AL + + + + G + +++ LS + + V +L G++ Sbjct: 497 FCKRNRMQLALMLIDLDRFKTINDTLGHQAGDELLVQVAKRLSHAVRESDIVARLGGDEF 556 Query: 406 ALRLNTESHQERITALDSHL---KQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGEL 462 + L L + + G ++ + C + I LL Sbjct: 557 VIALPGIGSPADAAHLADDITREISAPYLIKGQELRTSPSIGICVYPGDGSEIGDLLKNA 616 Query: 463 NTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD 522 + + + + +++ + + L+ A+ F L QP +R Sbjct: 617 DVA--MYHAKANGRGNYQFFTEDMNIATTERMCLESDLRLAITRREFLLHYQPQLDLRSG 674 Query: 523 --VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENR-AKMPAH 579 V E L+R + L+SP F+P+A E G+ ++I WV+E + + + + Sbjct: 675 TIVGVEALIRWQHPTRGLVSPADFIPIAEESGMIAAIGDWVLEEACRQLKVWQNRGITHL 734 Query: 580 RFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQEL 639 R +INLS P + +LLA + A +L EVTES ++ + ++ ++ L Sbjct: 735 RMSINLSAGQFLDKTLPARIHELLAANDLSADRLDLEVTESMSMASPDESISVMKTLSSS 794 Query: 640 GCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKML 699 G ++IDDFGTGY+S A LK + LKID SF+++I S+ D I LA + Sbjct: 795 GLTLSIDDFGTGYSSLAYLKLLPIHTLKIDRSFVKDIESDPNDADICDVTVLLAHKLGLE 854 Query: 700 VVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIE 741 VVAE VE E + +LS+G + +QGYLI KP P I Sbjct: 855 VVAEGVETEAQLKFLLSIGCEKVQGYLISKPLPADQAERFIR 896 >UniRef50_B9YY70 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9YY70_9NEIS Length = 1054 Score = 739 bits (1909), Expect = 0.0, Method: Composition-based stats. Identities = 131/588 (22%), Positives = 240/588 (40%), Gaps = 28/588 (4%) Query: 176 NLIGVPLCYFIIRVVRNPFYLRSYYSQLKQQVDAKVTKKEFALWLLALGALLLLLCMPLN 235 +L + R +R R ++ +Q++ AK+ +++ + +++ Sbjct: 470 SLTSMQYQDHAYRSLRARDMSRRQQAEQQQRLAAKIFDTSSQAIVISDASNHIVMVNRAF 529 Query: 236 EKSTIFSTNYTLSLLLP--LMMWGAMRYGYKLISLLWAVV-----LMISIHSYQNYIPIY 288 T Y+ + + + R +W + I + + IY Sbjct: 530 TD----ITGYSAQEAIGRQPSLLSSGRQPPAFYQKMWQQLAQRGHWAGEIWNRRKDGTIY 585 Query: 289 PGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL 348 P + + + + V + + + + ++ I+ +A D + LPN ++ L Sbjct: 586 PEWLSISLLRDEAGQVSHHVALFSDI--SERKEQEAHIRHMAEHDFLTDLPNRALIHDRL 643 Query: 349 RD--------APWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQL 400 A+ +L + + + G + ++++ L + + V + Sbjct: 644 AQAIRAAARQKNRLAVLFLDLDHFKNINDTLGHAHGDELLKQVAQRLQHTVRGSDTVGRN 703 Query: 401 SGNDLALRLNTESHQERITALDSHLKQ---FRFFWDGMPMQPQIGVSYCYVRSPVNHIYL 457 G++ L + + L L F DG + + + + Sbjct: 704 GGDEFVLIVPELASPAEAAQLAQRLLDDLRRPFQIDGQALAISTSIGISLFPDNGSELQE 763 Query: 458 LLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPI- 516 LL + + N + L ++ +++ + N L+QALE +L+ QP Sbjct: 764 LLVSADLA--MYHAKAQGRNRYQFFTPELNAQVAERLTLENHLRQALERQQLYLVYQPQF 821 Query: 517 -TGMRGDVYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAK 575 R V E LLR + LISP F+P+A E GL I WV++ + A A Sbjct: 822 AIDNRRLVGCEALLRWQHPEQGLISPARFIPLAEETGLIVEIGRWVLDEACRQAAAWLAA 881 Query: 576 MPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQH 635 R A+N+S + Q EV LA++++ + L EVTES + + +QA LQ Sbjct: 882 GTPLRVAVNVSARQLGQPDLLAEVEAALARHRLPSCWLELEVTESTLMEDAEQAVRHLQA 941 Query: 636 LQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARM 695 +E G +A+DDFGTGY+S LK + DL+KID +F+ N+ N D IV++I LA Sbjct: 942 FKERGIHLAVDDFGTGYSSLTYLKRFSPDLIKIDRAFVMNLPDNRDDAAIVSAIVQLAEA 1001 Query: 696 KKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPI 743 M +AE VE+EE + + G D +QGYL G+PQ + ++ Sbjct: 1002 LGMQTLAEGVESEEQLDFLAQAGCDVVQGYLTGRPQSAGELTAQLAGA 1049 >UniRef50_C4K931 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4K931_THASP Length = 855 Score = 739 bits (1908), Expect = 0.0, Method: Composition-based stats. Identities = 117/533 (21%), Positives = 209/533 (39%), Gaps = 25/533 (4%) Query: 232 MPLNEKSTIFSTNYTLSLLLPL--MMWGAMRYGYKLISLLWAVV-----LMISIHSYQNY 284 + + T Y ++ L + + R + +W + + + + Sbjct: 326 ILSVNPAFTRMTGYAPEEVVGLNPSVLNSGRQSPAFYARMWDGLLGDGQWQGEVWNRRKT 385 Query: 285 IPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRAL 344 +YP I ++ + + + +R + RI+ LAY DP+ LPN R L Sbjct: 386 GEVYPQLLHITAIRDREGVLTHYAALFTDI--SRLKETEARIRDLAYYDPLTGLPNRRLL 443 Query: 345 NRAL--------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGED 396 + L R A+ ++ + + + + G + + +++ L L + Sbjct: 444 DDRLQVELAHAARLRCRLAVMFVDLDRFKRINDSLGHAVGDKLLVEIAARLRASLRDDDT 503 Query: 397 VYQLSGNDLALRLNTESHQERITALDSHL---KQFRFFWDGMPMQPQIGVSYCYVRSPVN 453 V ++ G++ + LN S + + + + +G + V Sbjct: 504 VARMGGDEFLVVLNNLSGPDEAATMARRMVAELRRPVNVEGRELVVTTSVGVAVYPDDSR 563 Query: 454 HIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMA 513 L+ + + + N + + +++A+ L +AL + L Sbjct: 564 DADTLVKHADVA--MYRAKDEGRNSFQLFEPAMNARSLERLALETALHRALPRDELQLYF 621 Query: 514 QPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAE 571 QP+ G V E LLR + + L+SP F+P+A + GL I WV+ + Sbjct: 622 QPVMKAEGGELVAVEALLRWRHPDLGLVSPADFIPLAEDTGLIVPIGEWVLRSACEHHRR 681 Query: 572 N-RAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQ 630 A +N+S + F V +LA+ + L E+TES + + +A Sbjct: 682 WCEAGGAPLHMMVNISARQFREEGFAAMVGSVLAETGMTPGDLTLELTESMLMDDTDRAL 741 Query: 631 ITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASIC 690 L HL+ LG +AIDDFGTGY+S A LK D LKID F+R I N+ D +V++I Sbjct: 742 ARLDHLRALGVCLAIDDFGTGYSSLAYLKRFPIDELKIDRLFVRGIDRNTRDAALVSAIV 801 Query: 691 HLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPI 743 L + VVAE VE + + G D QG+ P P + + P Sbjct: 802 SLGHSLGLRVVAEGVETAAHLDVLRRQGCDLAQGFHFSPPLPWEEFVKAYPPA 854 >UniRef50_A0L8P4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L8P4_MAGSM Length = 754 Score = 737 bits (1903), Expect = 0.0, Method: Composition-based stats. Identities = 116/526 (22%), Positives = 212/526 (40%), Gaps = 25/526 (4%) Query: 236 EKSTIFSTNYTLSLLLP--LMMWGAMRYGYKLISLLW-----AVVLMISIHSYQNYIPIY 288 + T ++ L + + R+ + +W I + IY Sbjct: 213 NPAFTEITGFSREEALGHNPRSFKSDRHDATFYTNMWRKIAEEGFWQGEIWDRRKNGEIY 272 Query: 289 PGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL 348 P T + + + V ++I + + + +A +++RLAY D + LPN + L Sbjct: 273 PKRLTINAVRNQAGEVENYIGIFSDI--SESKATELKLERLAYYDALTQLPNRMLFHDRL 330 Query: 349 --------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQL 400 R A+ ++ + + + G + Q ++ L + + V ++ Sbjct: 331 EHEFYNAQRHRKQVAVFFIDLDRFKQVNDTLGHSAGDELLQHVAQRLEGCVRAADTVARM 390 Query: 401 SGNDLALRLNTESHQERITALDSHLKQF---RFFWDGMPMQPQIGVSYCYVRSPVNHIYL 457 G++ + L S E + + + + G + + N + Sbjct: 391 GGDEFTVILADISDNESVARVARKVLEELQKSISIKGHDIFVGASIGIALYPDNGNDVET 450 Query: 458 LLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPIT 517 L + + + + + + ++++ ++L A+ N + QP Sbjct: 451 LTKNADMA--MYRAKESGRGNYKFFSEEMNVSTSQRLSLESQLHHAVNANLLEVYYQPKL 508 Query: 518 GMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAEN-RA 574 M+ V E L+R + +I P F+PVA E GL + V+ + A R Sbjct: 509 NMQSGIMVGMEALVRWPQADGSMIPPIQFIPVAEETGLIVPLGRLVMRQAMLDCARWVRE 568 Query: 575 KMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQ 634 R A+NLS VE+ Q LA+ ++A E+TES + +V+ A TL+ Sbjct: 569 TGMNLRVAVNLSAREFQSPGLVVEIEQTLAECGLDARHFEVEITESLMMHDVENAIATLE 628 Query: 635 HLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLAR 694 + LG IA+DDFGTGY+S + LK LK+D SF+++I + D +IVA+I LA+ Sbjct: 629 QISRLGIHIAMDDFGTGYSSLSYLKKFPIHSLKVDRSFVKDIPDDPNDIEIVAAILSLAK 688 Query: 695 MKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEI 740 + + VVAE VE +E + D QGY KP +D + Sbjct: 689 VLNLKVVAEGVETQEQLSFLRQNLCDECQGYSFSKPLSAVDFTAFL 734 >UniRef50_C7RMB6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RMB6_9PROT Length = 922 Score = 737 bits (1903), Expect = 0.0, Method: Composition-based stats. Identities = 123/540 (22%), Positives = 225/540 (41%), Gaps = 39/540 (7%) Query: 236 EKSTIFSTNYTLSLLLPLM--MWGAMRYGYKLISLLWAVV-----LMISIHSYQNYIPIY 288 ++ + T Y+ ++ M + R L +W V + + +Y Sbjct: 378 NRAFVEETGYSAEDVVGRKRTMLTSGREDAALDDAMWETVQRCGAWQGEVWDRRKNGEVY 437 Query: 289 PGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL 348 P + T + LV ++ ++ + T+++AV ++ +LA+ DP+ LPN R L L Sbjct: 438 PVWLTISAVKGQGGLVTHYVATHIDI--TQRKAVEDQLHKLAFYDPLTQLPNRRLLLDRL 495 Query: 349 --------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQL 400 R A+ ++ + + L G + + +++ L + + V +L Sbjct: 496 GHVLAGSTRSRNQGAIMFIDLDNFKALNDTQGHDVGDRLLAEVAQRLKSSVRQCDTVARL 555 Query: 401 SGNDLALRLNTESHQE----RITALDSHLK-----QFRFFWDG-------MPMQPQIGVS 444 G++ + + + ++ A+ + +R +D + + Sbjct: 556 GGDEFVVMVQDLAADSMVVAQVEAVAGKILAALDCPYRLVFDAELGRRNALNYHCTASIG 615 Query: 445 YCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQAL 504 + ++ LL + + + ++ N R +Q + +VA+ L++A+ Sbjct: 616 ITLFGAHSTNVDELLKQADLA--MYQAKDSGRNAIRFFDPEMQAAITSRVALEADLREAV 673 Query: 505 EHNHFFLMAQPIT--GMRGDVYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVI 562 E F L QP E LLR ++ P F+P+A E GL + WV+ Sbjct: 674 EAGQFQLYYQPQVVGESHRLTGAEALLRWHHSRRGMVPPSEFIPLAEETGLILPLGQWVL 733 Query: 563 EHTLQFMAENRAK--MPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTES 620 E +A ++ M A+N+S + Q F +V +LA +L E+TES Sbjct: 734 ETACAQLATWASQPEMAQLTVAVNVSAHQIRQTDFVDQVLAVLADAGANPQRLKLELTES 793 Query: 621 NALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNS 680 ++NV+ + L+ G ++DDFGTGY+S + LK + D LKID SF+ +++++ Sbjct: 794 LLVSNVEDIIAKMTLLKSRGVGFSLDDFGTGYSSLSYLKRLPLDQLKIDQSFVNEVLTDA 853 Query: 681 LDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEI 740 D I I LA + V+AE VE EE R + G QGYL KP PL I Sbjct: 854 NDAAIAKMIVALAESLGLAVIAEGVETEEQRNFLAESGCHAYQGYLFSKPLPLAGFEQWI 913 >UniRef50_Q5P4W8 Putative uncharacterized protein n=2 Tax=Proteobacteria RepID=Q5P4W8_AZOSE Length = 1039 Score = 736 bits (1901), Expect = 0.0, Method: Composition-based stats. Identities = 128/537 (23%), Positives = 229/537 (42%), Gaps = 25/537 (4%) Query: 232 MPLNEKSTIFSTNYTLSLLLP--LMMWGAMRYGYKLISLLWAVV-----LMISIHSYQNY 284 + + T Y + ++ M+ R+ +W + + S ++ Sbjct: 498 ITSVNPAFCTITGYLAAEVIGRKSSMFKPERHEATFFDAMWTSIVESGSWAGEVWSRRSD 557 Query: 285 IPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRAL 344 YP + T + + + ++ + + T ++ + R A DP+ L N L Sbjct: 558 GDRYPQWVTITAVRDTDGRIAEYVTLFSDI--TERKQQEVAMWRQANFDPLTGLANRSLL 615 Query: 345 NRAL--------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGED 396 L R L +L + G + + + G + + ++ L+ + + Sbjct: 616 QDRLDRALAHARRHGCKVGLLFLDLDGFKWINDSLGHDVGDELLVDVARRLNSCVRDEDT 675 Query: 397 VYQLSGNDLALRLNTESHQERITALDSHL---KQFRFFWDGMPMQPQIGVSYCYVRSPVN 453 V +L G++ + ++ + + + A+ L + F G V + Sbjct: 676 VARLGGDEFTVVVHDLADRADLGAIADKLVAVLREPFALRGARHHISGSVGITVFPDDGD 735 Query: 454 HIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMA 513 + LL + + A +N + A ++Q + +V + L+ A+E F L Sbjct: 736 DVQTLLRNADIA--MYKAKQAGKNRAQPYAPHMQADALARVHLEADLRMAVEQRAFELHY 793 Query: 514 QPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAE 571 QPI V E L+R K +ISP F+PVA E GL I WV+ ++ + Sbjct: 794 QPIVDCASGALVGAEALIRWKHPERGMISPLEFIPVAEECGLIVPIGEWVLREVVRQRRD 853 Query: 572 NRA-KMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQ 630 A P R +N+S +A P V LLA++ L+FE+TES + + + Sbjct: 854 WLARGHPPLRLTLNVSGVQFREAGLPELVRTLLAEFGTARSSLVFEITESVLMGGSENVE 913 Query: 631 ITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASIC 690 + ++E G A+DDFGTG++S + LK D++KID SF+R+ + D +V +I Sbjct: 914 ARMCDIKEQGICFALDDFGTGFSSLSYLKRFPVDIVKIDRSFVRDCPDDRNDATLVEAII 973 Query: 691 HLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIRESA 747 ++A + V AE VE+ E RE + +LG DY+QGYLIGKP + P+R +A Sbjct: 974 NMAHSLGLRVTAEGVESAEQREFLRALGCDYLQGYLIGKPLAADAFEALMAPLRSAA 1030 Score = 81.6 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 12/104 (11%), Positives = 32/104 (30%), Gaps = 9/104 (8%) Query: 231 CMPLNEKSTIFSTNYTLSLLLP--LMMWGAMRYGYKLISLLWAVVLMISIH-----SYQN 283 + ST YT ++ + + + +WA + + + + Sbjct: 129 TIEYVNPQFERSTGYTAQEVVGKNPRILKSGNRSADEYAAMWATITHGHVWRGEFENVRK 188 Query: 284 YIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQ 327 Y + I + ++ F+ + T Q+ R ++ Sbjct: 189 DGAHYWERASIAPIRADDGMISGFVAVKEDI--TLQKRAERELR 230 >UniRef50_A1KAZ1 Hypothetical signaling protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KAZ1_AZOSB Length = 952 Score = 735 bits (1898), Expect = 0.0, Method: Composition-based stats. Identities = 125/536 (23%), Positives = 230/536 (42%), Gaps = 28/536 (5%) Query: 232 MPLNEKSTIFSTNYTLSLLLPL--MMWGAMRYGYKLISLLWAVV-----LMISIHSYQNY 284 + ++ T Y+ ++ + R+ +WA + + + + Sbjct: 422 IVAVNRAFTEVTGYSRDEVVGQNPRFLQSGRHDRGFYLSMWAALKEAGHWQGELWNRRKN 481 Query: 285 IPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRAL 344 ++P + T + + V ++ + + ++ + R+ LA+ DP+ LPN + Sbjct: 482 GELFPEWLTLNAVRNEVGHVTHYVGVFTDI--SKLKQTEDRLDYLAHHDPLTDLPNRLLV 539 Query: 345 NRAL--------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGED 396 L R A+ +L + + + + G + + ++ L L + Sbjct: 540 LSRLEHALDGAQRRGCRVAVMFLDLDRFKTVNDSLGHAAGDELLRAVAARLRGALREEDT 599 Query: 397 VYQLSGNDLALRLNTESHQERITALDSHL---KQFRFFW-DGMPMQPQIGVSYCYVRSPV 452 + +L G++ + L + +L F +G + + + + Sbjct: 600 LGRLGGDEFMVLLEHVEAPADAAVVAKNLVEVLAAPFALSNGHEVFIRASIGISFYPDDG 659 Query: 453 NHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLM 512 + L+ + A + N L R +++A+ RL++ALEH+ F + Sbjct: 660 DDFMTLVRNAD--AAMYRAKAQGRNTYGFYTEDLIRSATERLALETRLRRALEHDEFVVY 717 Query: 513 AQPITGMRGD--VYHEILLRMKGENDE-LISPDSFLPVAHEFGLSSSIDMWVIEHTLQFM 569 QP+ G++ + E L+R K E ++SP +F+PVA E GL ++ WV+ + + Sbjct: 718 YQPVLGVKDGRLLGAEALVRWK-PQGEPMVSPAAFIPVAEETGLIVALGEWVLRDACRQV 776 Query: 570 AEN-RAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQ 628 E A + A+NLS + ++ +LA+ + A QL E+TES+ L + Sbjct: 777 REWIDAGYAFGQVAVNLSAEQFRRQDVSAMLATVLAETGLPATQLELEITESSLLEAGEH 836 Query: 629 AQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVAS 688 A L+ L++ G +AIDDFGTGY+S A LK + D LKID SF+++I +S D I ++ Sbjct: 837 AVGLLERLKQQGVGLAIDDFGTGYSSLAYLKRFSIDKLKIDRSFVQDIADDSNDLAIASA 896 Query: 689 ICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIR 744 I +AR M V AE VE E E + LG QGYL P P + +R Sbjct: 897 IVAMARALDMAVQAEGVEGEAQLELLRGLGCGSYQGYLCSPPLPADEFEARFLRLR 952 >UniRef50_A0L8C6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacteria RepID=A0L8C6_MAGSM Length = 720 Score = 734 bits (1895), Expect = 0.0, Method: Composition-based stats. Identities = 101/531 (19%), Positives = 196/531 (36%), Gaps = 25/531 (4%) Query: 230 LCMPLNEKSTIFSTNY--TLSLLLPLMMWGAMRYGYKLISLLWAVV-----LMISIHSYQ 282 C+ S T Y L + + + R+ + +W + + + + Sbjct: 179 ACITNVNPSFEAITGYDRGSVLGQNISILQSGRHDRRFYGKMWQTLLTAGKWQGEVWNRR 238 Query: 283 NYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVR 342 IYP + I + S++ + + TR + + L+ D + LPN Sbjct: 239 KNGEIYPQWVNISAIRTGDGQTESYVGVFTDL--TRIKESEENLLYLSGHDALTELPNRL 296 Query: 343 ALNRALRD--------APWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPG 394 + L A+ + + +++ + G + +++ L + Sbjct: 297 LFHDRLNQTLVESADSGSIVAVLIVDLDRFKVINDSMGHEVGDSLLCEVATRLRAICPAK 356 Query: 395 EDVYQLSGNDLALRLNTESHQERITALDSHLK---QFRFFWDGMPMQPQIGVSYCYVRSP 451 + +L G++ + L + L + + + Sbjct: 357 ATLARLGGDEFGIVLPNMTQNRDAALLAQEVLTRVAQPITISEVEFAVGASIGMTVYPLD 416 Query: 452 VNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFL 511 +L+ + + + N + L ++ + + L+ A++ F L Sbjct: 417 GEKPSVLMRNAESA--MYHAKQSGRNNFQFYRSELNTASLARILLESGLRNAVDRQEFLL 474 Query: 512 MAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFM 569 QP + + E L+R + ++SP F+P+A E GL + W ++ + Sbjct: 475 FYQPQMELATGKLIGMEALIRWQHPEQGMVSPGEFIPLAEETGLVIPMGQWALKEACRQS 534 Query: 570 AENRAK-MPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQ 628 + R ++NLS F V + + + + L E+TES A+ +V++ Sbjct: 535 KVWMDQTGVPLRISVNLSGIQFRLPDFTEMVMRTVGESGLPPHCLELELTESIAMGDVEE 594 Query: 629 AQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVAS 688 L L G +AIDDFGTG++S + LK D LKID SF+RN + D I+ + Sbjct: 595 TLEKLTILSRFGVLLAIDDFGTGFSSLSYLKKFPIDTLKIDQSFVRNCTRDPEDAAIIRA 654 Query: 689 ICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNE 739 +LA + V+AE VE+ E E + D +QGY G+P Sbjct: 655 FINLAHSLNLEVIAEGVEHLEQLEFLAQESCDEIQGYFYGRPLSGDKFEMF 705 >UniRef50_C6NZD9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZD9_9PROT Length = 1149 Score = 733 bits (1894), Expect = 0.0, Method: Composition-based stats. Identities = 109/534 (20%), Positives = 202/534 (37%), Gaps = 24/534 (4%) Query: 232 MPLNEKSTIFSTNYTLSLLLPL--MMWGAMRYGYKLISLLWAVV-----LMISIHSYQNY 284 + + T Y+L +L + + +WA + + + + Sbjct: 620 IEYANSNFTKVTGYSLDEVLGKNPRFMQSGKTPKATYEDMWAHLTRGEPWKGELFNRRKD 679 Query: 285 IPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRAL 344 Y ++ V +++ + T +R RI++L + D + LPN L Sbjct: 680 GTEYIESVLISPVSQVDGRVMNYLAIKEDI--TEKRLTEERIEKLEHFDHLTGLPNRTQL 737 Query: 345 NRA--------LRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGED 396 N R + +L + + + G + Q ++ L L + Sbjct: 738 NERFKYALSLAQRSGEQMTVMFLDLDHFKDINDTLGHSIGDQLLMDVAKRLKETLRDEDT 797 Query: 397 VYQLSGNDLALRLNTESHQERITALDSHLKQFR--FFWDGMPMQPQIGVSYCYVRSPVNH 454 V + G++ L L ++ F ++ + + + Sbjct: 798 VSRQGGDEFILILPGTDENGAAHVAAKLMEAVSQAFQFEQHELVATCSIGIAIYPHDGEN 857 Query: 455 IYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQ 514 L +T + V + N +Q + + N L+ AL L Q Sbjct: 858 FETLSKNADTA--MYRVKHDGRNGFCFFTSEMQAHSARTLQLGNALRHALTRGQLHLHYQ 915 Query: 515 PITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAEN 572 P + V E LLR + ISP F+P+A + G I WV+ ++ + + Sbjct: 916 PQISTQDGHVVGAEALLRWQHPELGSISPAEFIPIAEDNGQIIPIGEWVLRTAIKQLKDW 975 Query: 573 -RAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQI 631 + +P A+NLS Q+ V+ +L + ++ L E+TE+ A+ + + A Sbjct: 976 MDSGLPPMIMAVNLSAAQFRQSNLMELVTSILDESKVPHRYLELELTEAVAMDDPQLAIG 1035 Query: 632 TLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICH 691 + L G +++IDDFGTGY+S + LK LKID SF+ +I + D IVA+I + Sbjct: 1036 VMDKLHTGGIKMSIDDFGTGYSSLSYLKRFKVYKLKIDQSFVHDITDDPDDKAIVAAIIN 1095 Query: 692 LARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIRE 745 +A M +AE VE + G + +QGY KP P ++ ++ + Sbjct: 1096 MASSLGMQTIAEGVETAGQLSFLRLQGCNEVQGYYFSKPLPAEQFVSYLQKQGQ 1149 >UniRef50_C6P6N2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6N2_9PROT Length = 1043 Score = 731 bits (1889), Expect = 0.0, Method: Composition-based stats. Identities = 120/534 (22%), Positives = 219/534 (41%), Gaps = 30/534 (5%) Query: 236 EKSTIFSTNYTLS--LLLPLMMWGAMRYGYKLISLLWAVV-----LMISIHSYQNYIPIY 288 + T YTL ++ + ++ + +W + I + ++ Sbjct: 513 NPAFTRITGYTLEDVRGKDPGIFQSGKHDAQFYQQMWQSILDDGHWQGEIWDLKKNGELH 572 Query: 289 PGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL 348 + + I + ++ + + + T ++ I A D + +LPN R Sbjct: 573 AKWLSISVIRRADGSIYRHVGQFSDI--TEKKRKDELIWEQANFDTLTNLPNRRLFADRF 630 Query: 349 RD--------APWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQL 400 R + AL L + + L +G + + +++ L+ + + V ++ Sbjct: 631 RQAISAGARSGRYGALLSLDLDQFKRLNDTFGHSMGDKLLIEVARRLTSCVREEDTVARM 690 Query: 401 SGNDLALRLNTESHQE-----RITALDSHLKQF---RFFWDGMPMQPQIGVSYCYVRSPV 452 G++ + LN ++ R + ++ + D + R Sbjct: 691 GGDEFLVILNGLGSEQNEAAIRAELIAEKIRNELCRPYQLDKTEHHSSSSIGIVLFRGHS 750 Query: 453 NHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLM 512 + LL ++T + N +Q L+ + + L+ ALE F L Sbjct: 751 DDPERLLAHVDTA--MYQSKAKGRNAICFFDSSMQEILEKRGQLETALRGALERKEFLLH 808 Query: 513 AQPITGMRGD-VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAE 571 Q G + E LLR +SP F+PVA E GL I WV+E +A Sbjct: 809 YQLQMDSSGRPIGAEALLRWNNAKLGSVSPVQFIPVAEESGLILPIGHWVLETACAQLAR 868 Query: 572 NRA--KMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQA 629 ++ + A+N+S +A F +V +L + I+ W L E+TES L ++ + Sbjct: 869 WQSDPRFNRLCIAVNVSAIQFREAAFVAKVRNVLQQSGIQPWLLKLELTESLVLDDINDS 928 Query: 630 QITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASI 689 + ++ L+ LG + ++DDFGTGY+S + L + D LKID SF+R+I ++ D IV +I Sbjct: 929 ILKMEALKNLGVKFSMDDFGTGYSSLSYLSRLPLDQLKIDQSFVRDITTDQHDAAIVQTI 988 Query: 690 CHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPI 743 +A M V+AE VE EE RE + G QGYL KP P+ + ++ + Sbjct: 989 ISMALSLGMEVIAEGVETEEQREFLDLRGCQAYQGYLYAKPMPIEELEIKLAQL 1042 >UniRef50_Q21R50 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Rhodoferax ferrireducens T118 RepID=Q21R50_RHOFD Length = 1052 Score = 731 bits (1889), Expect = 0.0, Method: Composition-based stats. Identities = 113/534 (21%), Positives = 206/534 (38%), Gaps = 31/534 (5%) Query: 236 EKSTIFSTNYTLSLLLPL--MMWGAMRYGYKLISLLWAVV-----LMISIHSYQNYIPIY 288 ++ T Y+ + + + R+ + +W + I + + ++ Sbjct: 522 NRAFSAITGYSAPEAVGQNPRLLSSGRHDAAFYAAMWDSLVREGAWQGEIWNRRKNGEVF 581 Query: 289 PGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL 348 P + T + + ++ + + +++ +I+ LA+ D + LPN R L L Sbjct: 582 PEWLTISAVKDPAGQATHYVATFTDLST--RKSAEDQIKSLAFYDTLTGLPNRRLLLDRL 639 Query: 349 --------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQL 400 R AL Y+ + + L YG + Q Q+++ LS L G+ V + Sbjct: 640 KQALASGARHRRQGALLYIDLDDFKTLNNTYGHDVGDQLLQEVAQRLSHYLRAGDTVARP 699 Query: 401 SGNDLALRLNTES--HQERITALD------SHLKQFRFFWDGMPMQPQIGVSYCYVRS-P 451 G+ + L S E T + + + + Sbjct: 700 GGDSFVVLLEALSTNSVEAATEAENTGEKIRLALSQPYQIADHAHRSTASIGVTLFDDRQ 759 Query: 452 VNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFL 511 I L + A N R +Q + A+ L++A+ N F L Sbjct: 760 QEGIDEPLKRAELA--MYQAKTAGRNTLRFFDPQMQTAVMAMAALEADLREAVRSNQFLL 817 Query: 512 MAQPITGMRGDV-YHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMA 570 Q V E L+R + L+ P F+P+A + GL + WV+E +A Sbjct: 818 YYQAQVSGERQVAGVEALVRWQHPVRGLVPPAEFIPLAEQTGLILPLGQWVLETACAQLA 877 Query: 571 ENRAK--MPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQ 628 ++ A+N+S QA F +V L + +L E+TES + + + Sbjct: 878 AWASQPERAHLTVAVNVSALQFHQADFVAQVLAALKRAGANPQRLKLELTESLLVHDAED 937 Query: 629 AQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVAS 688 + L+E G ++DDFGTGY+S + LK + + LKID F+R+I+ ++ D I Sbjct: 938 VIAKMITLKEQGVGFSLDDFGTGYSSLSYLKRLPLNQLKIDQGFVRDILHDANDAAIAKM 997 Query: 689 ICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEP 742 + LA + V+AE VE E R+ + + G QG+L + P+ + Sbjct: 998 VVALADTLGLSVIAEGVETEAQRDFLAAQGCHAYQGHLYSRALPIDAFEAFMRQ 1051 >UniRef50_A0L9T5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=A0L9T5_MAGSM Length = 1275 Score = 731 bits (1889), Expect = 0.0, Method: Composition-based stats. Identities = 112/530 (21%), Positives = 209/530 (39%), Gaps = 25/530 (4%) Query: 232 MPLNEKSTIFSTNYTLSLLLPL--MMWGAMRYGYKLISLLWAVV-----LMISIHSYQNY 284 + + YT ++ + + R+ + +W + I + Sbjct: 735 ITDVNPAYQRIMGYTRDEIVGQNPSILKSGRHDEQFYEQMWNEMLSEGHWQGEIWDRRKS 794 Query: 285 IPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRAL 344 I+P + T I ++ +F+ +M + T+Q+ ++++LAY DP+ LPN Sbjct: 795 GEIFPKWLTIDAIRDEQGVISNFVGLFMDI--TQQKETEEQLEKLAYYDPLTELPNRALF 852 Query: 345 NRALRD--------APWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGED 396 L L ++ + + + + G +++ + L + Sbjct: 853 RDRLEQEMRLSARGGKSLGLFFIDLDRFKYVNDSLGHDKGDDLLIQVAGRIKHHLRTSDT 912 Query: 397 VYQLSGNDLALRLNTESHQERITALDSHLKQ---FRFFWDGMPMQPQIGVSYCYVRSPVN 453 V +L G++ + L + + + + F G + + Sbjct: 913 VARLGGDEFTVILPGIEQTNDVARIAGAIVKSLGEVFVLQGHEVFIGGSIGIAMHPDDGE 972 Query: 454 HIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMA 513 L +T + + + ++++ L+QA+E N L Sbjct: 973 DYETLTKHADTA--MYRAKEEGRGTYKFFTSDMNEINGRRLSLERALRQAVECNQLTLHY 1030 Query: 514 QPITGMR--GDVYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAE 571 QP ++ E L+R L+SP F+P+A E GL +I WV++ Sbjct: 1031 QPKVDVKQCRITGMEALVRWNHPEQGLVSPVDFIPIAEETGLIITIGEWVMQQACMDAKR 1090 Query: 572 N-RAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQ 630 R+ + AINLS A ++ + L + + L E+TES A+ +V + Sbjct: 1091 LARSSRHPLQVAINLSAKQFQDALLVAKLERSLQQSGLAPELLEVEITESLAMGDVNRTI 1150 Query: 631 ITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASIC 690 + L+ LG +++IDDFGTGY+S + LK + + LKID SFI+++ +S D IV+SI Sbjct: 1151 EQIGELRALGVKVSIDDFGTGYSSLSYLKKLPLNALKIDKSFIQDLYLDSDDTAIVSSIL 1210 Query: 691 HLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEI 740 +A + VVAE VEN+ + +QGY KP P + Sbjct: 1211 SMASALGLSVVAEGVENQAQIHFLCEKECPTIQGYFFSKPLPFEAFEKFL 1260 >UniRef50_C6WTL1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WTL1_METML Length = 976 Score = 730 bits (1886), Expect = 0.0, Method: Composition-based stats. Identities = 118/527 (22%), Positives = 212/527 (40%), Gaps = 30/527 (5%) Query: 236 EKSTIFSTNYTLSLLLPLM--MWGAMRYGYKLISLLWAVV-----LMISIHSYQNYIPIY 288 ++ I T Y + + R + ++ + I + + IY Sbjct: 437 NQAFIDITGYEAEEATGKKPNILKSGRQSGEFYRNIYTSLRETGSWSGEIINRRKNGEIY 496 Query: 289 PGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL 348 P + T + + +++ + + +A RI+ LA+ DP+ +LPN R + L Sbjct: 497 PEHLTITAVKDADGQTTNYVGMFTDISV--AKAASERIENLAFFDPLTNLPNRRLFSDRL 554 Query: 349 --------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQL 400 R + AL +L + + L G ++++ LS + G+ V +L Sbjct: 555 TQALVNSTRSGNYGALVFLDLDHFKSLNDTLGHDYGDMLLKQVALRLSNCVREGDSVARL 614 Query: 401 SGNDLALRLNTESH-----QERITALDSHLK---QFRFFWDGMPMQPQIGVSYCYVRSPV 452 G++ L + S +I A+ + + + Sbjct: 615 GGDEFVLLVENLSANDVEAAHQIEAIGDKILMSLNQPYQLQSHEYLSTPSIGISLFNGHQ 674 Query: 453 NHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLM 512 LL + + A N R +Q + +V + L++A+E F L Sbjct: 675 ESSEDLLKHADIA--MYQAKKAGRNTLRFFDPLMQETINMRVDLERELKKAIEQKQFELY 732 Query: 513 AQPITGMRGD-VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAE 571 Q G E L+R + +ISP F+PVA E GL + I WV+ + Sbjct: 733 YQVQMNSAGQPSGAEALIRWRHPERGIISPIQFIPVAEETGLITQIGEWVLNQACLQLQA 792 Query: 572 NR--AKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQA 629 + AIN+S Q F +V + + I+ +L E+TES + N++ Sbjct: 793 WQLDQASKDFSLAINVSAKQFLQPDFANQVKNSIRSFHIDNTKLKLELTESMLIDNIEYV 852 Query: 630 QITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASI 689 T+ L E+G Q ++DDFGTGY+S LK + LKID SF+R++ +++ + IV +I Sbjct: 853 IHTMNTLGEIGIQFSLDDFGTGYSSLQYLKMLPLSQLKIDQSFVRDLATDNSNKTIVLTI 912 Query: 690 CHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDT 736 +A + V+AE VE +E + + + G QGY +P + + Sbjct: 913 ITMAHSLGLNVIAEGVETDEQLQLLNAHGCGNYQGYYFSEPLSINEF 959 >UniRef50_C5UZT1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5UZT1_9PROT Length = 1301 Score = 730 bits (1886), Expect = 0.0, Method: Composition-based stats. Identities = 122/534 (22%), Positives = 207/534 (38%), Gaps = 24/534 (4%) Query: 232 MPLNEKSTIFSTNYTLSLLLPL--MMWGAMRYGYKLISLLWAVV-----LMISIHSYQNY 284 + + + +T YTL ++ + + + + + +W + + + + Sbjct: 770 IEYANDAFVKTTGYTLPEVMGKNPRILHSGKTTVETYAAMWTQLNSGQMWRGELINRRKD 829 Query: 285 IPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRAL 344 Y + + V +++ + T Q+ V RI++LA+ D + LPN L Sbjct: 830 GTEYVELARISPLRHTDGRVTNYLSIKEDI--TEQKQVEARIRQLAHFDLLTGLPNQTLL 887 Query: 345 NRA--------LRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGED 396 R A A+ +L I + + G + + L+ + LL + Sbjct: 888 KDRAGFAMQMAQRSAHHLAVLFLDIDHFKNINDTLGHRIGDELLVHLAKRMKLLLRDEDT 947 Query: 397 VYQLSGNDLALRLNTESHQERITALDSHLK--QFRFFWDGMPMQPQIGVSYCYVRSPVNH 454 + + G++ L L + L+ + + + + S Sbjct: 948 LSRFGGDEFILVLPDTDADGAAHVAEKILETVAKTCYIEQHELVVTPSIGIAMYPSDGMD 1007 Query: 455 IYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQ 514 L + + N R +Q ++ + N L+QAL N F L Q Sbjct: 1008 FDKLYQSADVA--MYRAKQDGRNNFRFFTSEMQARSARRLLLENALRQALSRNQFELHYQ 1065 Query: 515 PITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAEN 572 P M+ V E LLR ISP F+PVA E GL SI WV+ +Q + Sbjct: 1066 PQISMQDGKIVGAEALLRWYHPELGSISPAEFIPVAEESGLILSIGEWVLRTAVQQVKRW 1125 Query: 573 R-AKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQI 631 + A P AINLS QAR V Q+L + + + E+TES A+ N A Sbjct: 1126 QDAGHPPVTVAINLSAVQFRQARLSELVMQILHEANLAPHWIELELTESVAMDNPLVAIG 1185 Query: 632 TLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICH 691 + L G +++IDDFGTGY+S + L+ + LKID SF+R++ + IV +I Sbjct: 1186 VMNDLHGCGIRMSIDDFGTGYSSLSYLRKFKVNKLKIDQSFVRDLADDIESRAIVTAIIT 1245 Query: 692 LARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIRE 745 LA +AE VE + G + +QGY +P + + E Sbjct: 1246 LASSMGFQTIAEGVETAGQLAFLRLQGCNEVQGYYFSRPLTVALFEAFVLGHAE 1299 >UniRef50_Q47BF2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47BF2_DECAR Length = 1038 Score = 730 bits (1886), Expect = 0.0, Method: Composition-based stats. Identities = 127/538 (23%), Positives = 223/538 (41%), Gaps = 31/538 (5%) Query: 236 EKSTIFSTNYTLSLLLPL--MMWGAMRYGYKLISLLWA-----VVLMISIHSYQNYIPIY 288 ++ T Y+ + + + + + LW + I + + IY Sbjct: 504 NRAFTEVTGYSAAEAIGQTPALLKSGYHEDSFYKDLWTSLKENGLWRGEIWNRRKNGEIY 563 Query: 289 PGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL 348 P + T + + F+ +++ + T+++ +IQ LA DP+ HLPN R LN L Sbjct: 564 PEWLTISAVRGQHGEITHFVSSFLDI--TKRKEAEEQIQFLALYDPLTHLPNRRLLNERL 621 Query: 349 --------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQL 400 R +AL ++ + +M+ + G + ++++ L + + V +L Sbjct: 622 SKALTSSGRQRRHAALLFIDLDNFKMINDSMGHDIGDLLLRQVALRLRESVRSNDTVSRL 681 Query: 401 SGNDLALRLNTES-----HQERITALDSHLKQ---FRFFWDGMPMQPQIGVSYCYVRSPV 452 G++ + L S +I + + + + + Sbjct: 682 GGDEFVILLEELSPNIHDATTQIEHIAQKMLDSLVQPYKFGEFSHHCTASIGAIPFMDAT 741 Query: 453 NHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLM 512 I LL + + A +N +Q E++ + A+ L+QA F L Sbjct: 742 ETIESLLKSADMA--MYKAKAAGKNRLFFFDPAMQTEVEARAALERDLRQAQREKQFVLY 799 Query: 513 AQPITGMRGDV-YHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAE 571 QP G V E L+R + LI P F VA E L I WV+E + + Sbjct: 800 LQPQVDQSGHVSGAEALIRWQHPTHGLILPGEFTHVAEETRLILPIGQWVLEEACKQLVI 859 Query: 572 NRA--KMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQA 629 + AIN+S F +V++ + + A +L E+TES L ++ Sbjct: 860 WQKNPDTAHLTLAINVSALQFRNPDFVDDVARAIHESGALASRLKLEITESLLLEDIDGT 919 Query: 630 QITLQHLQ-ELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVAS 688 +Q L+ +LG +++DDFGTGY+S + LK + D +KID SF+++I N D I + Sbjct: 920 IERMQVLKNQLGVGLSLDDFGTGYSSLSYLKQLPLDQIKIDRSFVKDIHCNPNDAAIAEA 979 Query: 689 ICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIRES 746 + L R + V+AE VE E R+A+++ G QGYL G+P P+ P R S Sbjct: 980 VIALGRSFSLNVIAEGVETIEQRDALIARGCLTFQGYLFGRPGPIDAFPACRPPQRNS 1037 >UniRef50_C7RS22 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RS22_9PROT Length = 1006 Score = 730 bits (1886), Expect = 0.0, Method: Composition-based stats. Identities = 125/533 (23%), Positives = 214/533 (40%), Gaps = 30/533 (5%) Query: 236 EKSTIFSTNYTLSLLLPL--MMWGAMRYGYKLISLLWA-----VVLMISIHSYQNYIPIY 288 ++ T Y + + + R+ + + V I + + ++ Sbjct: 478 NQAFTDITGYAADECIGQTPKLLSSGRHDASFYAAMRESIERNGVWQGEIWNRRKNGDVF 537 Query: 289 PGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL 348 P + T ++ +V ++ + +A I+ LA+ D + LPN R L+ L Sbjct: 538 PEWLTISSVRDGDGVVTHYVSALTD--MSAHKAAQEEIRHLAFYDALTGLPNRRLLHDRL 595 Query: 349 R--------DAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQL 400 R AL ++ + + L G + + Q++ LS + G+ V +L Sbjct: 596 RVAIASSVRSERQGALLFIDLDNFKTLNDTLGHDMGDRLLQQVGQRLSSSVREGDTVARL 655 Query: 401 SGNDLALRLNTESHQERITALDSHL--------KQFRFFWDGMPMQPQIGVSYCYVRSPV 452 G++ + L + A S + + G V Sbjct: 656 GGDEFVVMLENLGERPEEAAGQSRIVGEKIIKLLNRPYDLSGHDYHNTPSVGITLFGGQQ 715 Query: 453 NHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLM 512 I L+ + + + N R +Q + + + L+ A+ FFL Sbjct: 716 VGIDELMKRADLA--MYEAKASGRNALRFFDPRMQAVVTARADIEKDLRAAVGRQSFFLA 773 Query: 513 AQPITGMRGDV-YHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAE 571 QP G V E LLR + + +SP F+PVA E GL + +WV+E A Sbjct: 774 YQPQVDASGQVIGAEALLRWQHQQRGTVSPAEFIPVAEETGLILPLGLWVLETACAQAAL 833 Query: 572 N--RAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQA 629 R ++N+S QA F +V +LA+ L E+TES L NV+ Sbjct: 834 WAARPGRERFTVSVNVSARQFRQANFVDQVLAVLARSGAHPRNLKLELTESMLLDNVQDI 893 Query: 630 QITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASI 689 + L+ G ++DDFGTGY+S + LK + D LKID SF+R+++++ D I +I Sbjct: 894 IAKMSALKARGVGFSLDDFGTGYSSLSYLKQLPLDQLKIDQSFVRDLLTDPNDEVIARTI 953 Query: 690 CHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEP 742 LAR + V+AE VE+ E ++A+ + G QGYL +P L D + Sbjct: 954 IALARTLGLSVIAEGVESVEQQDALAAQGCLAYQGYLFSRPLALADFEAFLRR 1006 >UniRef50_Q478F7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q478F7_DECAR Length = 739 Score = 730 bits (1885), Expect = 0.0, Method: Composition-based stats. Identities = 119/532 (22%), Positives = 218/532 (40%), Gaps = 31/532 (5%) Query: 236 EKSTIFSTNYTLSLLLPLM--MWGAMRYGYKLISLLWAVV-----LMISIHSYQNYIPIY 288 ++ T Y+ + M + R + +W + I + + I+ Sbjct: 192 NQAFTKLTGYSAEEAIGQTPGMLKSGRQDADFYAAMWCSLGQCGHWQGEIWNRRKNGEIF 251 Query: 289 PGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL 348 P + T + V ++ + + + + I LA+ DP+ +PN R L L Sbjct: 252 PEWLTISGVRDGRGKVTHYVSTFSDI--SNLKVAESEIHHLAFYDPLTAMPNRRLLLNRL 309 Query: 349 --------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQL 400 R + AL + I + L G + +++ LS + G+ + Sbjct: 310 DQACVSAKRSGQFGALLIIDIDHFKTLNDTLGHDVGDHLLVEVARRLSACIREGDTAARQ 369 Query: 401 SGNDLALRLNTESHQER-----ITALDSHLK---QFRFFWDG-MPMQPQIGVSYCYVRSP 451 G++ + L ++ + ++ + +G + Sbjct: 370 GGDEFVVMLEELGSEQEGAAVQAEIVAEKIRLELARPYLLNGDTEYFRSASIGISLFFGQ 429 Query: 452 VNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFL 511 I +LL + + L +A N R +Q L ++ + L++AL + F L Sbjct: 430 EKTIDILLKQADIA--LYKAKDAGRNAIRFFDTAMQTTLDERAELEAGLRRALVRDEFVL 487 Query: 512 MAQPITG-MRGDVYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMA 570 QP +R + E LLR + +++P+ F+P+A E GL I +WV++ + Sbjct: 488 YVQPQVDAVRRLIGAEALLRWQPPGRAMVAPNDFIPLAEETGLIVPIGIWVLDQACAELR 547 Query: 571 ENRA--KMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQ 628 + + ++N+S QA F +V+ LA++ L E+TES L NV++ Sbjct: 548 RWADDPRSASLFLSVNVSARQFRQADFVAQVADALARHGANPRLLKLELTESLLLDNVEE 607 Query: 629 AQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVAS 688 +Q L+ +G + ++DDFGTGYAS + LK + LK+D SFIR+I N D IV + Sbjct: 608 VIEKMQALRTIGVRFSLDDFGTGYASLSYLKRFPFEQLKVDRSFIRDININPDDAAIVRA 667 Query: 689 ICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEI 740 I + ++ VVAE VE++ ++ QGYL G+P D + Sbjct: 668 IIAMGNTLRLSVVAEGVEDDLQHAYLVKHECSLFQGYLFGRPMSFDDFRASL 719 Score = 48.5 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 16/160 (10%), Positives = 45/160 (28%), Gaps = 24/160 (15%) Query: 174 VGNLIGVPLCYFIIR--VVRNPFYLRSYYSQLKQQVDA----KVTKKEFALWLLALGALL 227 + + + + R ++ NP L SY+++ QQ+ +V +E L + Sbjct: 26 LLCDLQLSIFEHAGRAIILTNPDGLISYFNRAAQQMLGYTPEEVVGRETPLLFHLADEIS 85 Query: 228 LLLCMPLNEKSTIFSTNYTLSLLLPLMMWGAMRYGYKLISLLWAVVLMISIHSYQNYIPI 287 + E + + + +R + Sbjct: 86 ACARLYSCEPDGTPPAGFG---VFISRLKLKIRDEADWT-------------YVRKDGSH 129 Query: 288 YPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQ 327 P + + V ++ + + +R + ++ Sbjct: 130 LPVSLAVSVLRDAKGGVQGYLGIASDI--SERRRMEHDLR 167 >UniRef50_A5GBG4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=A5GBG4_GEOUR Length = 709 Score = 730 bits (1885), Expect = 0.0, Method: Composition-based stats. Identities = 123/588 (20%), Positives = 228/588 (38%), Gaps = 28/588 (4%) Query: 181 PLCYFIIRVVRNPFYLRSYYSQLKQQVDAKVTKKEFALWLLALGALLL--LLCMPLNEKS 238 P+ + +R V + + ++ + + K A+ + ++ + Sbjct: 114 PINHNKLRAVIGQCMTSIKWERQIREQEKFIRKLSRAVEQSPVAIIITDTSGTIEYVNPR 173 Query: 239 TIFSTNYTLSLLLPLM--MWGAMRYGYKLISLLWA-----VVLMISIHSYQNYIPIYPGY 291 T YT + + + + + LW H+ + +Y Sbjct: 174 FTQLTGYTSAETIGKKPHILKSGETPPEEYRKLWEIISGGGEWWGEFHNRKKNGELYWAS 233 Query: 292 TTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALN------ 345 + IT+ + + FI + T ++ I+++AY D + LPN N Sbjct: 234 ASISPITNGNEQITHFIAFQEDI--TERKQAEETIKQMAYYDTLTGLPNRHLFNELMHLA 291 Query: 346 --RALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLE-PGEDVYQLSG 402 +A R A+ +L + + + G + Q Q +H L + V + G Sbjct: 292 LAQAHRHNRLLAVLFLDLDRFKHINDTLGHTVGDQLLQASAHRLKECCRRDRDTVARRGG 351 Query: 403 NDLALRLNTESHQERITALDSHLKQF---RFFWDGMPMQPQIGVSYCYVRSPVNHIYLLL 459 ++ + L + + + F + + + + L+ Sbjct: 352 DEFIILLPDIDDVQEAVRVAQKIIDAFTQVFVLPDIELFISTCIGISIFPNDGRDTETLI 411 Query: 460 GELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGM 519 + + + + + ++ M N L++AL+ F L QP + Sbjct: 412 KNADMA--MYRAKEQGRSRYHLYTSSMDEQAFRRLTMENSLRKALQREEFSLYYQPKVNI 469 Query: 520 RGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRA-KM 576 + V E L+R + LI P+ F+P+A + GL + WV+ + Sbjct: 470 KTGQIVCLEALVRWQNPEMGLILPNQFIPLAEDTGLIIPLGEWVLRTACAQNKTWQLLNY 529 Query: 577 PAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHL 636 P R A+N SP Q R V Q+L + + L E+TE+ L NV++ TL L Sbjct: 530 PPMRVAVNFSPRQFQQPRLTDMVEQILGEADLAPCWLELELTENVMLQNVEKTVQTLNRL 589 Query: 637 QELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMK 696 LG I+IDDFGTGY+S + +K + LKID SF+ +I +N+ D I ++ +A+ Sbjct: 590 SNLGIHISIDDFGTGYSSLSYIKKLPIQTLKIDRSFVHDINTNADDAAIAIAVITMAQSL 649 Query: 697 KMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIR 744 ++ V+AE VE E + + L MQGYL KP P+ + + I+ Sbjct: 650 RLNVIAEGVETLEQMKLLDGLNCPEMQGYLFSKPLPVAEMTTLLSNIK 697 >UniRef50_A6SVJ0 Uncharacterized conserved protein n=4 Tax=Proteobacteria RepID=A6SVJ0_JANMA Length = 956 Score = 729 bits (1883), Expect = 0.0, Method: Composition-based stats. Identities = 104/482 (21%), Positives = 187/482 (38%), Gaps = 18/482 (3%) Query: 278 IHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVH 337 + +Y+ ++ + + V F+V + AT + ++ D + Sbjct: 469 LRNYRKDGALFWSDLYIAPVKDDTGEVSHFVVALYDITAT--KRYESELEFQTNRDALTG 526 Query: 338 LPNVRALNRALRDAPWSA--------LCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSP 389 L N L L A A + ++ + + + G + ++ L Sbjct: 527 LANRSLLRDRLSQAISYAHRYNHPIWIAFVDLDRFKFVNDTLGHQAGDLLLKAIAERLQH 586 Query: 390 LLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLKQ---FRFFWDGMPMQPQIGVSYC 446 + + V ++ G++ L L T + + +G + Sbjct: 587 AVRDTDTVSRMGGDEFVLILPERVDAGLSTGIVQRIMDGIAQPLTIEGHEFFISSSIGVA 646 Query: 447 YVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEH 506 + L+ + + N + + +++ + L+ A+E Sbjct: 647 VYPNDGVTPEELIKHADIA--MYRAKETGRNNFQFYTSSMNERALERLRLEGDLRNAMER 704 Query: 507 NHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEH 564 F L QP +R V E L+R + +I P F+ +A E GL I WVI Sbjct: 705 GEFILHYQPQLDLRTGKIVGVEALIRWQHPELGMIPPMRFIGLAEETGLIVPIGAWVIRE 764 Query: 565 TLQFMAENRA-KMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNAL 623 + + + + R ++NLS Q ++ L + Q+ L E+TES + Sbjct: 765 ACRQNKVWQEHGLGSLRMSVNLSARQFAQQDLLESIALALEETQLPPQCLEIELTESLVM 824 Query: 624 TNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDY 683 +V A L+ L+ LG Q++IDDFGTGY+S + LK D+LKID SF+ +I ++ D Sbjct: 825 ADVDHAIGILRELKALGVQLSIDDFGTGYSSLSYLKRFPIDVLKIDRSFVNDITTDPDDA 884 Query: 684 QIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPI 743 IVASI LA ++ V+AE VE EE + D +QGY +P ++ Sbjct: 885 AIVASIISLAHSLRLTVIAEGVETEEQLAYLQQHDCDQIQGYFFSRPITADAMEVMLKDD 944 Query: 744 RE 745 + Sbjct: 945 KR 946 >UniRef50_A0L9S8 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L9S8_MAGSM Length = 971 Score = 727 bits (1879), Expect = 0.0, Method: Composition-based stats. Identities = 109/536 (20%), Positives = 218/536 (40%), Gaps = 25/536 (4%) Query: 232 MPLNEKSTIFSTNYTLSLLLPLM--MWGAMRYGYKLISLLWAVV-----LMISIHSYQNY 284 + + + T Y L +L + + R+ + +W + I + + Sbjct: 432 IEMVNPAFSRITGYQLDEVLGKGPDLLQSGRHDAPFYTQMWHALQQDGAWEGEIWNRRKS 491 Query: 285 IPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRAL 344 YP + + T+T+ ++ + + T+++ I A D + LPN Sbjct: 492 GETYPEWLSIATVTNDKGETVQYVAAFSDI--TKRKQAEETILHQANYDFLTDLPNRNLF 549 Query: 345 NRAL--------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGED 396 + L R AL ++ + + + G + Q ++++ L + + Sbjct: 550 HDRLQTELKRSQRSGQQVALLFIDLDRFKFVNDTLGHNVGDQLLREVAIRLGHCVRESDT 609 Query: 397 VYQLSGNDLALRLNTESHQERITALDSHL---KQFRFFWDGMPMQPQIGVSYCYVRSPVN 453 + +L G++ + L E + L + + R+ + + + Sbjct: 610 IARLGGDEFTVILPELHGPEGVARLAQGMIDKLEERYCIQDHELFISASIGITIYPEDAD 669 Query: 454 HIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMA 513 ++ L+ + + + + + + L+ ALE F++ Sbjct: 670 NMMDLVKNADVA--MYRAKENGRGSFCFYTAEMNADARQLHKIEQALRVALEEGQFWIHY 727 Query: 514 QPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAE 571 QP E L+R + E++ PD F+PVA E GL I +WV+ + +A+ Sbjct: 728 QPYVQQSSGLITGVEALIRWRNSAGEIVYPDQFIPVAEETGLIVPIGLWVLRSVIGVIAQ 787 Query: 572 NR-AKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQ 630 + P F++N+S + ++ L + QI L+ E+TES + + + Sbjct: 788 WQREGHPDITFSVNVSARQFQEGHLVGQIKAALQENQINPQSLMLEITESLMIRDPEHTL 847 Query: 631 ITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASIC 690 L+ ++ LG ++A+DDFGTGY+S LK DLLKID SFI I ++ D +V++I Sbjct: 848 NMLKEIKALGVRVALDDFGTGYSSLGYLKQFPIDLLKIDRSFINGIANSQDDETMVSAIV 907 Query: 691 HLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIRES 746 +A + V+ E +EN++ + V DY+QG+ +P P + E ++S Sbjct: 908 SMAHSLGVGVIGEGIENDQQLQRVNLHACDYVQGFFYSRPMPYDELALFFEGYQKS 963 >UniRef50_C6WUG6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WUG6_METML Length = 836 Score = 727 bits (1877), Expect = 0.0, Method: Composition-based stats. Identities = 116/527 (22%), Positives = 209/527 (39%), Gaps = 30/527 (5%) Query: 236 EKSTIFSTNYTLSLLLPL--MMWGAMRYGYKLISLLW-----AVVLMISIHSYQNYIPIY 288 + T Y+ ++ + + R+ LW I + + IY Sbjct: 309 NSAFTTITGYSAEDVVGKNPRILSSGRHDQLFYQALWDRVNTTGTWCGEIWNRRKNGDIY 368 Query: 289 PGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL 348 P T + V +++ + + + +A +I+ LA+ DP+ +LPN L + Sbjct: 369 PERITISEVKDKDGKVTNYVSVFTDI--SESKASSEQIEHLAFYDPLTNLPNRLLLLDRV 426 Query: 349 RD--------APWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQL 400 R AL ++ + ++L G + + LS + G+ V + Sbjct: 427 RQAFSSSSRTGKKGALLFVDLDHFKVLNDTLGHSTGDLLLKLQAERLSHCVRAGDTVARF 486 Query: 401 SGNDLALRLNTES-HQERITALDSHL-------KQFRFFWDGMPMQPQIGVSYCYVRSPV 452 G++ + L + A+ + + Q + Sbjct: 487 GGDEFVVVLEDLDRNATEAAAIAEQIGNKILSTLHEPCQFGTHQYQSTSSIGITLFSGDE 546 Query: 453 NHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLM 512 + I LL + + + A N R +Q +L + ++ + L+ A+E L Sbjct: 547 HEIEDLLKQADI--SMYQAKKAGRNTLRFFDPAMQEKLSVRASLESELRYAIEKQQLALY 604 Query: 513 AQPITG-MRGDVYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAE 571 Q + V E L+R +SP F+P+A E L + WVI +AE Sbjct: 605 YQVQVDDNQRMVGAEALIRWIHPERGTVSPIEFIPIAEESALILDVGHWVINTACMQLAE 664 Query: 572 NRAKM--PAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQA 629 + A+N+S F Q + ++I+A +L E+TES L +V Sbjct: 665 WAKSVEKKHLMIAVNVSAHQFRALDFVQSTQQAIDLHKIDASRLKLELTESVILEDVDDV 724 Query: 630 QITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASI 689 + L+ LG ++++DDFGTGY+S + LK + D +KID SF+R++ + D +V +I Sbjct: 725 IAKMHALKALGVKLSLDDFGTGYSSLSYLKKLPLDQVKIDQSFVRDLAYDPNDAIMVKTI 784 Query: 690 CHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDT 736 LA ++ V+AE VE E + + G QGYL G+P P+ Sbjct: 785 IDLANNFRINVIAEGVETELELDILKGYGCRLYQGYLFGRPVPIEQL 831 >UniRef50_C6P1Y8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1Y8_9PROT Length = 812 Score = 727 bits (1877), Expect = 0.0, Method: Composition-based stats. Identities = 112/544 (20%), Positives = 207/544 (38%), Gaps = 31/544 (5%) Query: 231 CMPLNEKSTIFSTNYTLSLLLP--LMMWGAMRYGYKLISLLWAVV-----LMISIHSYQN 283 + + T YTL + + + ++ + +W + I + Sbjct: 272 LIVDVNPAFTRITGYTLDEVRGKNPRIMQSGKHDNEFYRHMWQAILNEGHWQGEIWDKRK 331 Query: 284 YIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRA 343 IY + S V+ + + + T ++ I A D + LPN R Sbjct: 332 TGEIYAKLAHISILRRSDGGVYRHVAQFSDI--TEKKQKDELIFWQANYDALTCLPNRRL 389 Query: 344 LNRAL--------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGE 395 LN L R+ AL +L + + L G +++ + + + Sbjct: 390 LNDRLAHALAANKRNEDCGALMFLDLDKFKTLNDTLGHAYGDMLLVEVARRIKSCVREVD 449 Query: 396 DVYQLSGNDLALRLNTE-----SHQERITALDSHLK---QFRFFWDGMPMQPQIGVSYCY 447 V ++ G++ + L + + ++ + + Sbjct: 450 TVARIGGDEFVVLLENLGADIKDATQAAAHIAEKIRASLSTPYQLHDKMHHSSPSIGVSL 509 Query: 448 VRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHN 507 + L+ + + + A N R +Q+ ++ A+ + L+ A+ Sbjct: 510 IHCNGESAEELIKQADMA--MYQAKEAGRNAVRFFDPQMQQSVETIAALESDLRHAVHER 567 Query: 508 HFFLMAQPITG-MRGDVYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTL 566 L Q V E LLR ++SP F+P A E L I WV++ Sbjct: 568 QLQLFYQIQLDHTHHPVGAEALLRWIHPVRGMVSPAQFIPFAEESSLILDIGHWVLDEAC 627 Query: 567 QFMAEN--RAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALT 624 + +A + + A+N+S Q F +V ++ K+ I+ +L E+TES AL Sbjct: 628 RQIAAWSHQERTRDLVLAVNISARQFKQPDFVEQVGAMIRKHAIQPARLKLELTESIALE 687 Query: 625 NVKQAQITLQHLQE-LGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDY 683 + + L+ LG +++DDFGTGY+S + LK + D +KID SF+R++ +S D Sbjct: 688 ELDVIITKMHALRNGLGISLSLDDFGTGYSSLSYLKRLPLDQIKIDQSFVRDMTVDSGDA 747 Query: 684 QIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPI 743 +V +I +A + V+AE VE + G QGYL G+P PL + ++ Sbjct: 748 VMVKTIIDMAHNFGIEVIAEGVETAGQFFLLKQYGCLLFQGYLFGRPVPLREFEALLQQT 807 Query: 744 RESA 747 SA Sbjct: 808 GSSA 811 >UniRef50_Q2W4Z4 Predicted signal transduction protein containing a membrane domain n=4 Tax=Magnetospirillum RepID=Q2W4Z4_MAGSA Length = 831 Score = 727 bits (1877), Expect = 0.0, Method: Composition-based stats. Identities = 128/620 (20%), Positives = 239/620 (38%), Gaps = 32/620 (5%) Query: 149 LASRENLVGVMPFNLGTLINYQALLVGNLIGVPLCYFIIRVVRNPFYLRSYYSQLKQQVD 208 N + + + G I + + + + ++ Sbjct: 204 HLGFPNGSVRGAVGVSVPMQPYQAMEGQAIRIQAISHGAFWLVGVAGILLIGRRSAGRLT 263 Query: 209 AKVTKKEFALWLLALGALLLLLCMPLNEKSTIFS--------TNYTLSLLLP--LMMWGA 258 K E + + L + + K I T Y + ++ + + Sbjct: 264 EKALADEETRLAAHVFSNALEATLITDPKGRILRINPMFTELTGYGEAEVVGGNPRIIRS 323 Query: 259 MRYGYKLISLLWAVV-----LMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMA 313 + + +W + I + + ++ + + + + + + FI ++ Sbjct: 324 NHHDADFYAEIWQAIFRDGRWQGEIWNRRKDGQVFVAWESIVAVYDEAGAIRYFIGSFRD 383 Query: 314 VLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL--------RDAPWSALCYLRIPGME 365 + T Q R I RLA+ D + LPN L R +AL +L + G + Sbjct: 384 I--TEQVEAQRHILRLAHYDVLTDLPNRVLFQDRLERAVVHALRHDRQAALLFLDLDGFK 441 Query: 366 MLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHL 425 + G ++++ L + + + +L G++ + L+ S + + + Sbjct: 442 KVNDTMGHRAGDDLLKEVAVRLRGCVRMTDTIARLGGDEFTVILDEISAANDASMVADKI 501 Query: 426 KQ---FRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRG 482 F DG + + LL +T + A + Sbjct: 502 LASLHAPIFIDGRDVFIGTSIGISLFPIDGTSGDELLKHADTA--MYQAKAAGKGRFNFY 559 Query: 483 AMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELIS 540 + + + + ++ + L+QA+E F + QP + + E L+R + +IS Sbjct: 560 SAEMTKREEHRLELETALRQAVEEGQFQVHYQPQKNLATNRVSGFEALVRWQHPRLGMIS 619 Query: 541 PDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVS 600 P F+P+A E L IDM+V+ + + R + A+NLS + + P +V Sbjct: 620 PVDFIPLAEEMHLIDRIDMFVMRQACRKGRQWRDQGYDICMAVNLSGVNFSRDDLPEQVR 679 Query: 601 QLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKN 660 Q+L A L E+TES + + LQ L+ LG ++AIDDFGTGY+S + LK Sbjct: 680 QVLEDTGFPAENLELEITESFVIDLEVDQREVLQRLRALGVKLAIDDFGTGYSSLSYLKR 739 Query: 661 VNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGID 720 + + LKID SF+R+I +S D +V+SI +A + VVAE +E + +LS D Sbjct: 740 LPVNTLKIDRSFVRDIARDSRDMMLVSSIIGIAHSLGLKVVAEGIEERDQLAILLSQECD 799 Query: 721 YMQGYLIGKPQPLIDTLNEI 740 +QGYLI KP P + Sbjct: 800 EIQGYLIAKPMPAEQAGIFL 819 >UniRef50_Q2RPL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RPL3_RHORT Length = 855 Score = 727 bits (1877), Expect = 0.0, Method: Composition-based stats. Identities = 127/585 (21%), Positives = 223/585 (38%), Gaps = 32/585 (5%) Query: 188 RVVRNPFYLRSYYSQLKQQVDAKVTKKEFALWLLALGALLLLLCMPLNEKSTIFSTNYTL 247 R VR P YY + + A+ +E L + + + L T+ + N Sbjct: 258 RCVRGPDNEVLYYEGTVEDITAQRQSQETMRLLGKVFTSIAEGIVLLERDLTVRTVNPAF 317 Query: 248 SLLL----------PLMMWGAMRYGYKLISLL-----WAVVLMISIHSYQNYIPIYPGYT 292 + P ++ + + ++ + A + I + P Y G Sbjct: 318 EAMTGLLRQDMEGRPARLFASGLHENDFLATVAAEVDRAGLWRGEIWGERREGPPYSGEM 377 Query: 293 TQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL---- 348 T + + + ++ + T+++ I+ A D + HLPN + L Sbjct: 378 TVTAVRTRAGETTHYVAAITDI--TKRKRDEEHIRFQANFDMLTHLPNRHLIMDRLEQAM 435 Query: 349 ----RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGND 404 R + +L + + + +YG + + + L + + V +L G++ Sbjct: 436 HQAQRTGRQVCVMFLDLDRFKQINDSYGHSAGDEVLKLTARRLRNCVRISDSVGRLGGDE 495 Query: 405 LALRLNTESHQERITALDSHLK---QFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGE 461 + L+ Q + + F G + V Y LL Sbjct: 496 FIVILSNVEDQHAGAYIAEKILYSLSEPFPIGGTEVFCIPSVGITYFPDHGETAPDLLRN 555 Query: 462 LNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMR- 520 + + E + R + M + L+ AL + F L QP Sbjct: 556 ADVA--MYHAKQGGERRYAIFTPDMARRSLALLTMESDLRHALARDEFELHFQPKVRADL 613 Query: 521 GDVYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRA-KMPAH 579 + E L+R + LI+P F+P+A E GL I W + + RA + Sbjct: 614 TLIGAEALIRWRHPEKGLINPGDFIPLAEESGLILPIGRWTLREACDRVMSWRAEGLTIP 673 Query: 580 RFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQEL 639 ++N+SP V Q+L + +E L E+TE+ +V+ A TL+ L++L Sbjct: 674 SVSVNVSPRQFQDQTLVETVRQILVETGLEPEALDLEITETVMTGDVEHAVGTLRALKDL 733 Query: 640 GCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKML 699 G ++IDDFGTGY+S LK D LKID +F+R+++ + D IV++I LAR Sbjct: 734 GVTLSIDDFGTGYSSLNYLKTFPIDTLKIDQTFVRDVLHSGKDAAIVSTIIALARNLGFS 793 Query: 700 VVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIR 744 VVAE VE E E + S QG+L +P P + + + Sbjct: 794 VVAEGVEEIEQAEFLGSRDCQNFQGFLYSRPLPPAEFTTFLRTAK 838 >UniRef50_C6P3H6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P3H6_9PROT Length = 837 Score = 726 bits (1875), Expect = 0.0, Method: Composition-based stats. Identities = 137/773 (17%), Positives = 279/773 (36%), Gaps = 68/773 (8%) Query: 21 LPSLILPIFAHINTFAHISSGEVFLFYLPLALMIS-MMMFFSW----------AALPG-- 67 + + +L + A + GE F++ LA ++ W P Sbjct: 81 IAAALLAMSGLDGLHAMMPDGESFVWLHSLATAFGGLLFAMIWLPGHWFKPVMRHWPLNA 140 Query: 68 --IALGIFVRKYAELGFYETLSLTANFIIIIILCWGGYRVFTPRRNNVSHGDTRLISQRI 125 +A + + + G + + F ++ G ++ L + Sbjct: 141 FLMAAAMGIYSILQPGQIPQMLASGQFTQAAVIMNIG----GGLFLLLAAVKLFLTYRH- 195 Query: 126 FWQIVFPATLFLILFQFAAFVGLLASRENLVGVMPFNLGTLINYQALLVGNLIGVPLCYF 185 A +LF F + A+ M ++ + + + + Sbjct: 196 ------SAKSEDLLFFFQCLILASAAITF----MQSSIWDMPWWGWHMQRLAGYTLTLWL 245 Query: 186 IIRVVRNPFYLRSYYSQLKQQVDAKVTKKEFALWLLALGALLLLLCMPLNEKSTIF---- 241 +++ + ++L +Q + E L + A M + + I Sbjct: 246 VVKTAKTIEGKTLLSNRLLKQQIEDRKQAENQLRIAATAFETHEAIMITDAHANIIRVNQ 305 Query: 242 ----STNYTLSLLLP--LMMWGAMRYGYKLISLLW-----AVVLMISIHSYQNYIPIYPG 290 T Y+ ++ + + R G + + +W + I + +YP Sbjct: 306 AFQNITGYSPEDVIGKNPRVLSSGRQGSEFYAAMWKRLLGSGSWTGEIWDKRKNGEVYPK 365 Query: 291 YTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL-- 348 + T + + + ++ + + T ++ I LA+ D + LPN R L + Sbjct: 366 WLTITAVKDNEGVTTEYVAIFSDI--TLRKHAEEEIYTLAFYDSLTKLPNRRHLLDRINQ 423 Query: 349 ------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSG 402 R + AL +L + ++L G + ++S + + + V ++ G Sbjct: 424 ARSISARSNHYGALLFLDMDRFKILNDTLGHDYGDLFLVEVSRRMRNCVRDMDTVARIGG 483 Query: 403 NDLALRLNTESHQER-----ITALDSHLKQF---RFFWDGMPMQPQIGVSYCYVRSPVNH 454 ++ + + + + ++ + + C Sbjct: 484 DEFVVLIEEIGTDNEEVSTKVALIAEKIRAALTEPYLLKDKEHHSSPSIGVCLYLGNEES 543 Query: 455 IYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQ 514 + LL + + + N R +Q ++ + A+ ++ A+ L Q Sbjct: 544 VDTLLRHADLA--MYQAKESGRNGVRFFDPAMQLAVETRAALEADMRHAVTGKQLRLYYQ 601 Query: 515 PIT-GMRGDVYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAEN- 572 + E L+R L+SP F+P+A E L I WV+E + + Sbjct: 602 IQLTSDHRPLGAEALIRWMHPVRGLVSPAQFIPIAEESSLILEIGHWVLETACKQLVLWS 661 Query: 573 -RAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQI 631 + AIN+S + F VS LL +Q+ +L E+TES L++V Sbjct: 662 KHERTRNLILAINVSAQQFNKHDFVDTVSTLLHLHQLNPNRLKLELTESVVLSDVADVVS 721 Query: 632 TLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICH 691 + L+ LG ++A+DDFGTGY+S + LK + D +KID SF+ ++ ++ D +V +I + Sbjct: 722 KMHALKALGVKLALDDFGTGYSSLSYLKQLPLDQIKIDRSFVSDVTTDPSDAVMVQTIIN 781 Query: 692 LARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIR 744 LA +M V+AE VE E+ + G QG+L GKP P+ + + + Sbjct: 782 LAHNFRMNVIAEGVETEDQLNFLKQNGCMAYQGFLFGKPMPIDEFEALLGQTQ 834 >UniRef50_Q7P0M4 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7P0M4_CHRVO Length = 633 Score = 726 bits (1874), Expect = 0.0, Method: Composition-based stats. Identities = 121/578 (20%), Positives = 234/578 (40%), Gaps = 33/578 (5%) Query: 198 SYYSQLKQQVDAKVTKKEFALWLLALGALLLLLCMPLNEKSTIF--------STNYTLSL 249 +Y + + + + + + + + I T Y + Sbjct: 55 AYLCATARDISGRRQTERQLRLAAQVFESSNEAILISDPDNRILTVNRAFGHITGYGEAE 114 Query: 250 LLPLM--MWGAMRYGYKLISLLWAVV-----LMISIHSYQNYIPIYPGYTTQLTITSSSY 302 + M + R+ +W + I + + +P + + Sbjct: 115 VRGSKASMLFSDRHEPAFFQQMWQTLQQRGQWSGEIWNRRKSGEHFPCWVNISVLQDGQG 174 Query: 303 LVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRD--------APWS 354 + F+ + + + ++ R+Q +A D + LPN +N L Sbjct: 175 EISHFVALFTDI--SERKEQEARVQHMAEYDALTDLPNRVLVNDRLHQAIRQAELQHNQL 232 Query: 355 ALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESH 414 A+ ++ + + + G + ++++ L+ + + V + G++ L L + + Sbjct: 233 AVLFVDLDHFKNINDTLGHCAGDELLKEVARRLAGAVRGLDTVGRTGGDEFVLILPSINQ 292 Query: 415 QERITALDSHLK---QFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIV 471 + + Q F + + + + I LL + + Sbjct: 293 PGEAAQIAERILRTIQQPFQIGEHSLVVGCSIGISLMPDDGSDIQTLLMNADLA--MYHA 350 Query: 472 TNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILL 529 N R + ++ +++ M NRL++A+E +L+ QP M G + E LL Sbjct: 351 KAHGRNTFRFYTREMNTQVAERLLMENRLRRAMEQEQLYLVYQPQYDMAGQRLLGCEALL 410 Query: 530 RMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAEN-RAKMPAHRFAINLSPT 588 R + ++ LI P F+PVA + GL + WV++ + + RA + R A+N+S Sbjct: 411 RWRDPDEGLIMPGRFIPVAEDTGLIVPLGRWVLDQACRQASLWLRAGLEPMRVAVNVSAH 470 Query: 589 SVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDF 648 + + F +V + L ++ + L EVTES + + A L ++ +G ++AIDDF Sbjct: 471 QLMRHDFIDDVREALQRHALPGHCLELEVTESTLMADADLASRQLAVIKAMGVRLAIDDF 530 Query: 649 GTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENE 708 GTGY+S A LK DL+KID SFI ++ + + IV++I HLA M +AE VENE Sbjct: 531 GTGYSSLAYLKRFAPDLVKIDRSFISDLPGDEENAAIVSAIVHLAGALGMETLAEGVENE 590 Query: 709 EIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIRES 746 + + +LG + MQGYL+G P +E + Sbjct: 591 NQQRFLQTLGCEAMQGYLLGSPLAEEMMTRRLEQQQRR 628 >UniRef50_C5V7A4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gallionellaceae RepID=C5V7A4_9PROT Length = 1013 Score = 725 bits (1872), Expect = 0.0, Method: Composition-based stats. Identities = 116/531 (21%), Positives = 216/531 (40%), Gaps = 30/531 (5%) Query: 236 EKSTIFSTNYTLSLLLPLM--MWGAMRYGYKLISLLWAVV-----LMISIHSYQNYIPIY 288 ++ T Y +L + R+ +W + + + + IY Sbjct: 485 NQAFTSITGYLAEEVLGKNPCFLASGRHDAGFYQSMWEGLNEKGKWEGEVWNRRKDGEIY 544 Query: 289 PGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL 348 P Y + V +++ + + T +A I++LA+ DP+ LPN R L L Sbjct: 545 PEYLLISAVKDIKNEVANYVATFRDI--TANKAAESEIKKLAFYDPLTLLPNRRLLTDRL 602 Query: 349 --------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQL 400 R+ AL ++ + + L G + ++++ L + + + +L Sbjct: 603 NHALASSARNRNIGALLFIDLDNFKTLNDTLGHDMGDALLKQVALRLKSCIREDDTLARL 662 Query: 401 SGNDLALRLNTES-----HQERITALDSHLKQF---RFFWDGMPMQPQIGVSYCYVRSPV 452 G++ + L S + + + + + Sbjct: 663 GGDEFVVILENLSELAMDAATKAELIGEKILAALNQVYPLASQEYHGAASIGVTLFAGHA 722 Query: 453 NHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLM 512 I L+ + + + + N R + Q+ + ++ + L++A++ L Sbjct: 723 LSIDELMKQADIA--MYQSKKSGRNTLRFFDLDTQKIINERAELEIELRKAVDKKQLHLH 780 Query: 513 AQPITG-MRGDVYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAE 571 Q + + E L+R LISP F+P+A + GL I WV++ + Sbjct: 781 YQIQLNSVGTPLSAEALIRWVHPVRGLISPAHFIPLAEDTGLILPIGQWVLDTACAQLHS 840 Query: 572 NRAK--MPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQA 629 + + A+N+S Q F V + + ++ I L E+TES + N++ Sbjct: 841 WQDERFTQDLTLAVNVSAKQFHQKNFVALVKETVQRHAINPKLLKLELTESMLVENIEDI 900 Query: 630 QITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASI 689 +T+ L+E+G Q ++DDFGTGY+S LK + + LKID SF+R + S+S D IV +I Sbjct: 901 IVTMNALREMGIQFSLDDFGTGYSSLQYLKRLPLNQLKIDQSFVRELSSSSSDRAIVRTI 960 Query: 690 CHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEI 740 +A + V+AE VE EE + +G +Y QGYL GKP P+ + Sbjct: 961 VAMAESLNLNVIAEGVETEEQHTLLQDIGCNYYQGYLFGKPMPIEQLDAIL 1011 >UniRef50_Q1JY96 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JY96_DESAC Length = 904 Score = 725 bits (1872), Expect = 0.0, Method: Composition-based stats. Identities = 117/520 (22%), Positives = 215/520 (41%), Gaps = 26/520 (5%) Query: 243 TNYTLSLLLP--LMMWGAMRYGYKLISLLWAVV-----LMISIHSYQNYIPIYPGYTTQL 295 + Y L L+ ++ + + +W + + + + +YP + Sbjct: 388 SGYRLKELIGENPRIFRSDHHNSAFYQQMWQSLIEEGRWEGEVWNRRKNGEVYPLNVSIS 447 Query: 296 TITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL------- 348 T+S+ + ++ + + + + ++Q AY D + +LPN + + L Sbjct: 448 RCTNSAGIPSHYVAIFHDI--SEIKRSEEKLQHQAYHDALTNLPNRKLFHDRLSVAVAHA 505 Query: 349 -RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLAL 407 + A+ YL I + + + G + Q++S L + +L G++ + Sbjct: 506 RQHKTKLAVIYLDIDNFKYINDSLGHHYGDKLLQQISERLLSCTRQEDTTARLGGDEFII 565 Query: 408 RLNTESHQERITALDSHLK---QFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNT 464 + IT L + + G + + + L+ + Sbjct: 566 LMPEIEDPHDITVLCRRILKQLELPHALSGRDYTVNVSMGVTVFPDDADTPEDLIKNADI 625 Query: 465 VAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD-- 522 + A +N + +Q+ + ++ + RL AL N F L QP + + Sbjct: 626 A--MYRAKEAGKNGYQLFTAAMQQTIMQRIELEARLSDALCRNEFVLFYQPQVDLESEHV 683 Query: 523 VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAK-MPAHRF 581 + E L+R + + +L+ PD F+P+A E GL + ID WV++ + + R + + Sbjct: 684 IGAEALIRWQKPDGQLVYPDEFIPIAEECGLITQIDHWVLKAACRQANKWREQSGRNFKM 743 Query: 582 AINLSPTSV-CQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELG 640 ++NLS V +L K + A L EVTE+ +++ + A + L LG Sbjct: 744 SVNLSSEQFAKDQELVQRVKNVLNKTGLPAECLTLEVTENAVMSDTESAIAIMTQLTALG 803 Query: 641 CQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLV 700 IAIDDFGTGY+S + +KN A LKID SF+++I +S D I ASI L R M V Sbjct: 804 VSIAIDDFGTGYSSLSYVKNFPARYLKIDRSFVKDIPGDSDDMAIAASIISLGRNLNMEV 863 Query: 701 VAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEI 740 +AE VE + + + +QGY GKP + Sbjct: 864 IAEGVEEQTQIDFLKQHRCQQVQGYFYGKPCAAEFFSQQF 903 >UniRef50_C5V280 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V280_9PROT Length = 725 Score = 724 bits (1869), Expect = 0.0, Method: Composition-based stats. Identities = 139/668 (20%), Positives = 255/668 (38%), Gaps = 50/668 (7%) Query: 118 TRLISQRIFWQIVFPATLFLILFQFAAFVGLLASRENLVGVMPFNLGTLINYQALLVGNL 177 + IFW L + + A + + + N L+ G L Sbjct: 50 PAITLAAIFW-GCRAGLLAMAMGVGFATYFFIPPFYSFENEGLKIMAWS-NLVFLVDGLL 107 Query: 178 IGVPL-CYFIIR--------VVRNPFYLRSYYSQLKQQVDAKVTKKEFALWLLALGALLL 228 + + R ++ S + ++ K + E L + A Sbjct: 108 VSFSIEAMHRYRKKSEVELAEIKLAHSQVSTLNSELDEMLHKQRETEQELLISATAFEAQ 167 Query: 229 LLCMPLNEKSTIF--------STNYTL--SLLLPLMMWGAMRYGYKLISLLWAVV----- 273 M + K I T Y+ ++ + + R+ + +W + Sbjct: 168 DGIMITDSKGVILRVNQAFTDITGYSSEEAVGQTPRLLKSGRHDADFYAAMWQCIKNTGQ 227 Query: 274 LMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVD 333 I + IYP + T + S V ++ + + + T ++A RI LA+ D Sbjct: 228 WSGEIWDRRKNGEIYPKWLTITEVKSFDGSVVHYVSSQVDI--TARKASEDRIHNLAFYD 285 Query: 334 PVVHLPNV--------RALNRALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSH 385 P+ LPN +++ +LRD AL ++ + + + G + ++++ Sbjct: 286 PLTQLPNRRLLLDRLRHSVSFSLRDGRHVALMFIDLDKFKKINDTLGHDIGDLLLKQVAE 345 Query: 386 WLSPLLEPGEDVYQLSGNDLALRLNTE-----SHQERITALDSHLKQ---FRFFWDGMPM 437 + + V +L G++ + L+ + + + + G Sbjct: 346 RTLTCVRTCDTVARLGGDEFVVLLDGLAGNLHEAAAQAKQIGRKIIDTLNQSYDLAGHEY 405 Query: 438 QPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMM 497 Q + LL + + + A N R +Q + +VA+ Sbjct: 406 QSGASIGIALFDEHCQTAEDLLKQADIA--MYQAKKAGRNTLRFFDPEMQASILARVALE 463 Query: 498 NRLQQALEHNHFFLMAQPITGMRGDV-YHEILLRMKGENDELISPDSFLPVAHEFGLSSS 556 + AL F++ QP+ G V E L+R + ++SP F+P+A E GL Sbjct: 464 KDFKDALLQEQFYICYQPVISREGRVAGAEALVRWRHSIRGIVSPADFIPLAEETGLIVP 523 Query: 557 IDMWVIEHTLQFMAEN--RAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLI 614 + WV++ + +++ R A+N+S + Q F V L+ + +L Sbjct: 524 LGNWVLKTACRQLSDWSSRDDTRDLTIAVNVSARQLKQEDFVTTVMGLIEETGANPRRLK 583 Query: 615 FEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIR 674 E+TES +++ + + + L+E G A+DDFGTGY+S A L + D LK+D SF+R Sbjct: 584 LELTESMLVSDAESIIVKMNLLKEAGITFALDDFGTGYSSLAYLSRLPLDQLKVDQSFVR 643 Query: 675 NIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLS-LGIDYMQGYLIGKPQPL 733 NI + I A+ +LA K+ VVAE VENE R + S D++QGYL KP + Sbjct: 644 NIETEDSAVVICAATINLAHNLKLKVVAEGVENEAQRYFLSSVHQCDFLQGYLFSKPVAI 703 Query: 734 IDTLNEIE 741 + I Sbjct: 704 DEFECFIR 711 >UniRef50_Q2W1Z2 Hypothetical 1041 kDa protein in hypE 3'region n=2 Tax=Proteobacteria RepID=Q2W1Z2_MAGSA Length = 1510 Score = 722 bits (1865), Expect = 0.0, Method: Composition-based stats. Identities = 124/582 (21%), Positives = 230/582 (39%), Gaps = 28/582 (4%) Query: 187 IRVVRNPFYLRSYYSQLKQQVDAKVTKKEFALWLLALGALLLLLCMPLNEKSTIFSTNYT 246 +R V + + ++Q+ + A A+ + S T Y+ Sbjct: 930 VRAVCSQSTDVTMKHHAEEQLRLAAKVFDRA--GEAITITDSSGNIITVNDSFCRITGYS 987 Query: 247 LSLLLPL--MMWGAMRYGYKLISLLWAVV-----LMISIHSYQNYIPIYPGYTTQLTITS 299 ++ + ++G +W + I + + IYP + T ++ Sbjct: 988 HQEVIGKNPRFLQSGKHGKDFYDAMWRSLIEQGCWQGEIFNRRKNGEIYPEWLTVNSVRD 1047 Query: 300 SSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL--------RDA 351 + V +++ + + + ++ RRI+ LA D + +PN L L R Sbjct: 1048 ENGSVVNYVAIFSDI--SAIKSSQRRIEFLATHDELTGIPNRSLLMDRLKHAVAQAKRQK 1105 Query: 352 PWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNT 411 A+ ++ + +++ + G + Q ++ + L + + + +L G++ L Sbjct: 1106 TKLAVLFIDLDNFKVINDSLGHDVGDQLLKQATERLKHCVRDSDTLARLGGDEFVAVLTD 1165 Query: 412 ESHQERITALDSHLKQF---RFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAEL 468 S E++ ++ + + F F + + + LL +T + Sbjct: 1166 VS-LEKVNSVAARIVDFLGASFSINDKSLFVSASIGISVFPDDGQDSLTLLKHADTA--M 1222 Query: 469 SIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHE 526 N + A ++ ++ + L+ ALE F + QP + V E Sbjct: 1223 YRAKERGRNQYQFFADEMKVIALQRLTLETGLRLALETKSFRMCYQPQVDIHTGEVVGAE 1282 Query: 527 ILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRA-KMPAHRFAINL 585 LLR + +SP F+P+A GL +I V L+ +A R + R AIN+ Sbjct: 1283 ALLRWRDPTLGEVSPAHFIPIAESCGLIGAIGETVFTMVLEQIAYWREKGLTVPRIAINV 1342 Query: 586 SPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAI 645 S + A F +V L I + + E+TES + + + L +G +++I Sbjct: 1343 SAHQLRDAGFAAKVGSWLDSSGISSELIGIELTESALMERIDMVKEMLTSFDGMGMKVSI 1402 Query: 646 DDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYV 705 DDFGTGY+S + LK + LKID SF+ I D I +I ++R M VVAE V Sbjct: 1403 DDFGTGYSSLSYLKKLPIHELKIDRSFVDGIALERDDRSIAKAIIDMSRALGMRVVAEGV 1462 Query: 706 ENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIRESA 747 E+EE + G D +QGYL +P IE +S+ Sbjct: 1463 ESEEQLGVLKEEGCDMVQGYLFHRPLSPEAFAKVIETGGKSS 1504 >UniRef50_Q2BR92 Putative uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BR92_9GAMM Length = 944 Score = 722 bits (1864), Expect = 0.0, Method: Composition-based stats. Identities = 119/525 (22%), Positives = 222/525 (42%), Gaps = 28/525 (5%) Query: 236 EKSTIFSTNYTLSLLLPL--MMWGAMRYGYKLISLLWAVV-----LMISIHSYQNYIPIY 288 + + T Y+ ++ + R+ +W ++ I + + ++ Sbjct: 421 NDAFVDITGYSADEVVGKNPKFLQSGRHDETFYRSMWQMINTSGYWRGEIWNRRKNGEVF 480 Query: 289 PGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRAL---- 344 P + + +T S+ + ++I + + T ++ V +++ L+ DP+ +LPN R L Sbjct: 481 PQWLSIQAVTDSAGMARNYIASITDL--TERKQVEEKLRYLSDFDPLTNLPNRRLLGYRV 538 Query: 345 -----NRALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQ 399 + AL Y+ + + + + G + QK++ ++ L+ G+ V + Sbjct: 539 DQTLSLSRRQPDQQFALLYIDLDHFKNINDSLGHRFGDEILQKVAKRITELVREGDTVSR 598 Query: 400 LSGNDLALRLNTESHQERITALDSHLK---QFRFFWDGMPMQPQIGVSYCYVRSPVNHIY 456 L G++ + + E+ L + D + V + + Sbjct: 599 LGGDEFMILMPELHKLEQAANLAERILHNIAQPLENDSH-LMITPSVGIAVYPNDGDSFD 657 Query: 457 LLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPI 516 LL + A + N + + + +++ + L++A+E+ F L QP Sbjct: 658 KLLRNAD--AAVHFAKRQGRNNYQFYTAEMNQRASERLQVEISLRKAVENQEFELFYQPQ 715 Query: 517 TGMRGDV--YHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRA 574 +R E L+R + N+ L+ P+ F+P+A E GL I WV+ + AE A Sbjct: 716 LNLRDGSLAGVEALIRWRHPNEGLVPPNRFIPLAEETGLILQIGSWVLVEACRQGAEWAA 775 Query: 575 -KMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITL 633 ++N+S EV L + L+ E+TES + + ++ L Sbjct: 776 KSTEPFTMSVNVSVRQFR-PELVEEVRSALLTSGLSPKSLVIEITESTLMQDEEKTLTLL 834 Query: 634 QHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLA 693 L+ELG Q+++DDFGTGY+S A LK N D LKID +FI ++ N D I ++I +A Sbjct: 835 HELKELGVQLSLDDFGTGYSSMAYLKRFNLDQLKIDRAFISDLPQNPDDAAITSAIIDVA 894 Query: 694 RMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLN 738 ++ VAE +E E E + S+G QGY KP P D Sbjct: 895 SHFGLVTVAEGIEKPEQAEFLASVGCIEGQGYYYEKPIPANDLTE 939 >UniRef50_Q7NZ89 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NZ89_CHRVO Length = 936 Score = 721 bits (1863), Expect = 0.0, Method: Composition-based stats. Identities = 124/536 (23%), Positives = 220/536 (41%), Gaps = 33/536 (6%) Query: 232 MPLNEKSTIFSTNYTLSLLLPLM--MWGAMRYGYKLISLLWAVV-----LMISIHSYQNY 284 + ++ T YT +L + + R+ +W + + + + Sbjct: 402 IRSVNRAFTEITGYTQHEVLGQKTSILSSGRHDEPFYEQMWQSIAEHGSWQGELWNRRKN 461 Query: 285 IPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRAL 344 +YP + + +S + ++ + + T ++A RIQ LA+ D + LPN + Sbjct: 462 GEVYPEWLAINAVRNSLGEITHYVAIFSDL--TERKAADERIQFLAHFDVLTSLPNRIHM 519 Query: 345 NRALRDAPWSALCYLRIP------------GMEMLVKNYGIMLRIQYKQKLSHWLSPLLE 392 + A +A+ + + ++ G Q + + ++ Sbjct: 520 QDRVELAIHNAVR----DNQRLALLLLDLDRFKTVNESLGHSAGDTLLQVAADRIKSVMA 575 Query: 393 PGEDVYQLSGNDLALRLNTESHQERITALDSHLKQF---RFFWDGMPMQPQIGVSYCYVR 449 PGE + + G++ + L S ++ + + Sbjct: 576 PGEMLARQGGDEFIILLPVISDPGEAALAAERVRDVFANPIELHNHVLTITPSIGISVYP 635 Query: 450 SPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHF 509 L+ + A + ++ N + L ++ +A+ ++L+ ALE + F Sbjct: 636 DDGRDYETLVRNAD--AAMYHAKSSGRNSYKFYTADLNARAREILAIESQLRFALERDEF 693 Query: 510 FLMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQ 567 L QP M V E L+R + L+ P F+ VA E G I WVI + Sbjct: 694 VLHYQPQVEMESGRIVGAEALIRWNHPSLGLLGPVRFIQVAEERGFIVQIGNWVIAEATR 753 Query: 568 FMAENR-AKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNV 626 + E R A +P AINLS Q ++V Q L + L EVTES + + Sbjct: 754 QLVEWRRAGLPELTLAINLSALQFRQPDLALQVKQALESSGLPGHALDIEVTESIIMEDA 813 Query: 627 KQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIV 686 + T+ +++ +G +++IDDFGTGY+S + LK AD LKID SF+R+I ++ D I Sbjct: 814 QATIQTIDNMKNMGLRLSIDDFGTGYSSLSYLKRFKADKLKIDRSFVRDIPQDADDSAIA 873 Query: 687 ASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEP 742 +I ++A+ M VVAE VE E + + G D++QGYLI KP P D + Sbjct: 874 RAIINMAKNLNMQVVAEGVETMEQWQFLEQEGCDFVQGYLIAKPLPADDFAELLHK 929 >UniRef50_Q3SIW6 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q3SIW6_THIDA Length = 1212 Score = 721 bits (1863), Expect = 0.0, Method: Composition-based stats. Identities = 119/536 (22%), Positives = 216/536 (40%), Gaps = 25/536 (4%) Query: 232 MPLNEKSTIFSTNYTLSLLLPLM--MWGAMRYGYKLISLLWAVV-----LMISIHSYQNY 284 + + T Y L + + + + WA + I + Sbjct: 681 IIAVNPAFTNLTGYALDDIRGEEPTILAGGQASEESYRSTWASLEQTGYWQGEIIDRRKD 740 Query: 285 IPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNV--- 341 +YP + + + ++ ++ ++ + T ++ +I+ LAY DP+ L N Sbjct: 741 GTLYPKWMAVSVVRDADGVLTHYVASFTDI--TERKLAEAQIKHLAYHDPLTGLSNRFSL 798 Query: 342 -----RALNRALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGED 396 + L A R+ A+ +L + + + + G L Q +++ L + + Sbjct: 799 QTQLDQTLALARREQRTLAVVFLDLDRFKSINDSLGHALGDQLLVEVARRLRDNVRDSDI 858 Query: 397 VYQLSGNDLALRLNTESHQERITALDSHLKQF---RFFWDGMPMQPQIGVSYCYVRSPVN 453 V +L G++ + L + L R+ G + + + Sbjct: 859 VARLGGDEFVVVLTEVGDAAGAARVADKLLGALVPRYRIGGHALHTTASIGISLYPHDGD 918 Query: 454 HIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMA 513 L+ +T + + + + + + + ++ + L+ A+E F L Sbjct: 919 DADALMKNADTA--MYHAKSQGRDNVQFFTPEMNQSVLKRLQFDHDLRVAVEAGQFELHY 976 Query: 514 QPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAE 571 QP V E L+R + + L+SP F+P+A E GL + WV+ + + Sbjct: 977 QPQINSTSGRVVKVEALVRWQHPREGLVSPAEFIPIAEETGLILPLGEWVLNEACRQLRL 1036 Query: 572 NR-AKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQ 630 R A + A+NLS + V++ L + +E L E+TES A+ + + Sbjct: 1037 WRDAGITDLTVAVNLSAHQLHSPALIPMVARTLGNHGLEGADLCLEITESVAMRDTTASI 1096 Query: 631 ITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASIC 690 LQ L++LG ++IDDFGTGY+S + LK + D LK+D SF+ I N D I A+ Sbjct: 1097 AQLQALRDLGIHLSIDDFGTGYSSLSYLKLLPIDTLKLDQSFVCEIEFNPSDVAICAATI 1156 Query: 691 HLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIRES 746 LA + VVAE +E E R + S D+MQGYL P P L I + + Sbjct: 1157 ALAHSLGLEVVAEGIETETQRRLLASHRCDFMQGYLFSAPLPAERALAYIREQQAA 1212 >UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z8G8_9NEIS Length = 887 Score = 721 bits (1862), Expect = 0.0, Method: Composition-based stats. Identities = 119/534 (22%), Positives = 211/534 (39%), Gaps = 26/534 (4%) Query: 232 MPLNEKSTIFSTNYTLSLLLP--LMMWGAMRYGYKLISLLWAVV-----LMISIHSYQNY 284 + + T Y + LL +W +W + + + Sbjct: 352 ILAVNAAFGEITRYPVEALLGRTPPLWRTAHQDAAFYRRIWRQLLASGRWEGELWHRKRD 411 Query: 285 IPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRA- 343 +P + + + ++ + + ++ + +++RLA+ DP+ LPN Sbjct: 412 GTPFPLWLSISCVRDEQGRPRQYVFVFNDI--SQLKDSQEQLERLAHYDPLTGLPNRHLA 469 Query: 344 -------LNRALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGED 396 L RA R A A+ ++ + + + + G + ++ L L + Sbjct: 470 LARLEHALERARRHAFPLAVMFIDLDRFKTINDSLGHQAGDELLVAIAQRLHQRLRQEDT 529 Query: 397 VYQLSGNDLALRLNTESHQERITALDSHL----KQFRFFWDGMPMQPQIGVSYCYVRSPV 452 + +L G++ + + Q+ + + L + F F G + Sbjct: 530 LARLGGDEFLVVIEEAPVQQVASIAHALLKVVDQPFGFSGGG-EAYVGASIGISLYPGDG 588 Query: 453 NHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLM 512 L+ + A + + N R L R ++++M L++AL F L Sbjct: 589 RSASELIRNAD--AAMYLAKAQGSNAYRFYTESLTRAANERLSMETSLRRALRCEEFVLH 646 Query: 513 AQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMA 570 QP+ + + E+L+R + + L+ P F+P+A E GL + WV+ + Sbjct: 647 YQPLVELASGRVLGAEVLVRWQPPGEALVPPSRFIPLAEETGLIVPLGDWVLHEACRQGK 706 Query: 571 ENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQ 630 A+NLSP + +V + L + QL E+TE + +QA Sbjct: 707 AWLDAGLPLLLAVNLSPRQFLRHDLVGQVRKALQGSGLPPAQLELELTEGALMEQAEQAV 766 Query: 631 ITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASIC 690 TL L+ LG +AIDDFGTGY+S A LK D LKID SF+R++ +S D +IV +I Sbjct: 767 KTLHALKRLGVSLAIDDFGTGYSSLAYLKRFPLDKLKIDRSFVRDLPRDSSDAEIVTTII 826 Query: 691 HLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIR 744 + R K+ +AE VE + + LG D QGYL P P + R Sbjct: 827 AMVRNLKLEALAEGVETPQQLAFLRQLGCDSGQGYLFSPPLPAEAFERWLRDGR 880 >UniRef50_A0LAF7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LAF7_MAGSM Length = 951 Score = 721 bits (1861), Expect = 0.0, Method: Composition-based stats. Identities = 112/511 (21%), Positives = 213/511 (41%), Gaps = 23/511 (4%) Query: 255 MWGAMRYGYKLISLLW-----AVVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIV 309 + + R+ + +W I + I+P + I + ++ F+ Sbjct: 431 ITQSGRHDASFYATMWKHLVGEGHWSGEIWDRRRNGEIFPKWLAISAIRNRQGVISHFVG 490 Query: 310 NYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL--------RDAPWSALCYLRI 361 + + +RQ++ ++++RL + DP+ LPN L R +L + + Sbjct: 491 VFNDI--SRQKSTEQQLERLVFYDPLTQLPNRVLFRDRLIHEVGVAERSNKLMSLLLVDL 548 Query: 362 PGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITAL 421 +++ G + + ++S L + + V +L G++ A+ L E + Sbjct: 549 DRFKIINDTLGHGVGDELLLQVSKRLIASVRKSDTVARLGGDEFAIILPGMERAEDAAHV 608 Query: 422 DSHL---KQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENM 478 + Q F + + + + L + A + + + Sbjct: 609 AETIINQLQVPFSIEENELFVGASIGIAVHGQDGDDYDSLTMNAD--AAMFKAKESGKGT 666 Query: 479 QRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGEND 536 + + + ++ M L++A+++ L QP V E L+R Sbjct: 667 YKFFTPDMNIQNAKRLVMEAELRRAVDNQELMLHYQPKVDAESRQIVGMEALVRWVHPTR 726 Query: 537 ELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMA-ENRAKMPAHRFAINLSPTSVCQARF 595 +I P F+P+A E GL + V+ + +P + A+NLSP + Sbjct: 727 GVIPPGEFIPLAEETGLIVPLGELVLTRACAQVKQWWDMGLPQVQVAVNLSPRQFQEPNL 786 Query: 596 PVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASY 655 +VS++L K A L E+TES A+ +V T++ L++LG +I+IDDFGTGY+S Sbjct: 787 IEKVSEILRKTGFPATGLELEITESIAMHDVDNTIETVKKLKDLGVRISIDDFGTGYSSL 846 Query: 656 ARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVL 715 + LK LKID SF+R++ + I++SI +A+ + VVAE VE + E + Sbjct: 847 SYLKKFPLHALKIDQSFVRDLGGDDDGASIISSIISMAKAMALGVVAEGVETAQQMEFLR 906 Query: 716 SLGIDYMQGYLIGKPQPLIDTLNEIEPIRES 746 +QG+ + KP P D L +E +E+ Sbjct: 907 GQECQQVQGFFLSKPLPPSDFLALLERQQET 937 >UniRef50_Q3A4W5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A4W5_PELCD Length = 1274 Score = 721 bits (1861), Expect = 0.0, Method: Composition-based stats. Identities = 120/531 (22%), Positives = 211/531 (39%), Gaps = 27/531 (5%) Query: 232 MPLNEKSTIFSTNYTLSLLLPL--MMWGAMRYGYKLISLLWAVV-----LMISIHSYQNY 284 + T YTL ++ + + + LW + + + + Sbjct: 709 IEYVNPKFTQLTGYTLEEVIAQNPRILKSGNLLPSVYDSLWKTITSGKEWYGELENKRKD 768 Query: 285 IPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRAL 344 I+ + + S + +FI + T+++ +R++ +A D + L N L Sbjct: 769 GSIFWESASISPLFDESGKIINFIGVKEDI--TQRKLNEKRLEYMATHDGLTGLANRTLL 826 Query: 345 NRAL--------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGED 396 L R A+ L + +++ + G ++ Q + + L + + Sbjct: 827 YDHLEIALHQSQRSKKLVAVILLDLDRFKVINDSLGHLVGDQVLKAVGQRLKQYVRSTDT 886 Query: 397 VYQLSGNDLALRLNTESHQERITALDSHLK---QFRFFWDGMPMQPQIGVSYCYVRSPVN 453 V +L G++ + L + +L FF G + C + Sbjct: 887 VARLGGDEFVVLLTDVRDTTAAGKIAHNLLRKLNEPFFLHGRELYVSASFGICLSETDNV 946 Query: 454 HIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMA 513 +LL + + + + + L + M N L+QALE N F L Sbjct: 947 DGTILLRNADIA--MYKAKAEGCGLY-FYSHEMNEHLIKTLEMENSLRQALEKNEFQLYY 1003 Query: 514 QPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAE 571 QP + E LLR + +I P F+P+A E GL I WV+ + Sbjct: 1004 QPKVEHATGRIIGCEALLRWRHPQRGMIPPSEFIPLAEETGLIVQIGHWVLAEACRQSKI 1063 Query: 572 NR-AKMPAHRFAINLSPTSVCQ-ARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQA 629 +P A+N+S Q V L + Q+ QL E+TES + + A Sbjct: 1064 WETEGLPPLTMAVNISARQFYQGENLIQAVKSTLERSQLVPSQLELELTESMVMKDAVNA 1123 Query: 630 QITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASI 689 + T++ +++LG +++DDFGTGY+S L++ D LKID SFI +I S++ I+ SI Sbjct: 1124 ERTMRKIKQLGVSLSLDDFGTGYSSLNYLRSFPVDSLKIDRSFILDIASDASSAAILNSI 1183 Query: 690 CHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEI 740 +A + VAE VEN + V + G +Y+QGYL +P P D + Sbjct: 1184 IAIAHTLGLQTVAEGVENNDQLALVANCGCNYIQGYLFSRPLPPEDFVALF 1234 >UniRef50_B8DLV2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DLV2_DESVM Length = 896 Score = 720 bits (1859), Expect = 0.0, Method: Composition-based stats. Identities = 105/535 (19%), Positives = 195/535 (36%), Gaps = 25/535 (4%) Query: 231 CMPLNEKSTIFSTNYTL--SLLLPLMMWGAMRYGYKLISLLWAVV-----LMISIHSYQN 283 + + T Y ++ + + + +W + I + + Sbjct: 354 IIVAVNPAFTTITGYPADDAVGQSPRLLKSHHHDSAFYEDMWRALVEEGRWEDEIWNRRR 413 Query: 284 YIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRA 343 +YP + + I + ++ + + T +A +IQ A+ D + LPN Sbjct: 414 NGEVYPEWLSISAIPGPTGRTEYYVAVFHDI--TELKAKESQIQHQAHHDALTGLPNRAL 471 Query: 344 LNRAL--------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGE 395 L L R+ A+ + + + + + G M+ Y Q+ + + ++ P + Sbjct: 472 LRDRLGMAINGARREDRKVAVLSVDLDNFKQVNDSLGHMVGDIYLQQAAEQMRQMVRPQD 531 Query: 396 DVYQLSGNDLALRLNTESHQERITALDSHLKQF---RFFWDGMPMQPQIGVSYCYVRSPV 452 + ++ G++ + L + + L + V Sbjct: 532 TLARVGGDEFVVVLQDVEGERDAAQVAERLLARFTDPVRVQEHELFVGASVGIALFPDDG 591 Query: 453 NHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLM 512 + L+ + +S + + ++++ L +AL Sbjct: 592 DDPDTLVRNADIA--MSRAKEQGKRRYHLFTPAMNDRAVRRLSLEGDLHRALAAGDITAH 649 Query: 513 AQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQ-FM 569 QP + E L R + P F+P+A GL + ++ Sbjct: 650 YQPRVDLNTGLITGMEALARWIRADGSQEHPAEFIPLAESTGLIVPLGEHMLRLACAKTR 709 Query: 570 AENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQA 629 A A A+NLS V+ +LA+ + L E+TES +T+V Sbjct: 710 ALCDAGHADLHVAVNLSVHQFRHRNLVGMVADVLAETGLPPHLLELEITESTIVTDVDHT 769 Query: 630 QITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASI 689 L L E+G +++DDFGTGY+S +LKN+ LKID SFIR+I + D I A+I Sbjct: 770 IRKLNQLAEMGIALSVDDFGTGYSSLYQLKNLPLTSLKIDRSFIRDIPDDPNDAAIAATI 829 Query: 690 CHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIR 744 +A + VVAE VE E +L G +QG+L +P P + + R Sbjct: 830 ITMADRLGLRVVAEGVETPEQLNFLLLEGCHEVQGFLFSRPLPPDEFTALLARGR 884 >UniRef50_A4J477 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Firmicutes RepID=A4J477_DESRM Length = 947 Score = 719 bits (1858), Expect = 0.0, Method: Composition-based stats. Identities = 109/435 (25%), Positives = 184/435 (42%), Gaps = 16/435 (3%) Query: 318 RQRAVVRRIQRLAYVDPVVHLPNVRALNRAL--------RDAPWSALCYLRIPGMEMLVK 369 ++ + ++ LAY D + LPN N L R+ A+ +L + + + Sbjct: 504 ERKRIEEILRYLAYHDSLTELPNRTLFNDRLSMALNQAHRNKNKLAVMFLDLDHFKKVND 563 Query: 370 NYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHL---K 426 G + Q + ++ S LL G+ + ++ G++ + L+ + E + + + Sbjct: 564 TLGHDIGDQLLKGIAQRFSKLLRKGDTIARIGGDEFTILLHNITRAENASIVADKIIDTL 623 Query: 427 QFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYL 486 + + LL + A + N + + Sbjct: 624 ANPWIIGNHEFHITTSIGIALYPDDGTDAESLLKNAD--AAMYQAKEMGRNNYQFYTPTM 681 Query: 487 QRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSF 544 + + + N L++AL+ F + QP + V E L+R + +ISP F Sbjct: 682 NAQTLRRFELENNLRRALDRKEFVIYYQPQVEIHTGKIVGVEALIRWQHPQRGMISPAEF 741 Query: 545 LPVAHEFGLSSSIDMWVIEHTLQFMAENRA-KMPAHRFAINLSPTSVCQARFPVEVSQLL 603 +P+A E GL I W++ + R +NLS Q P +S +L Sbjct: 742 IPMAEETGLIIPIGEWILRRACAQNKAWQDRGFSPMRVTVNLSARQFLQPHLPQYISNVL 801 Query: 604 AKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNA 663 + L E+TES A+ +V + TL L+++G +AIDDFGTGY+S LK + Sbjct: 802 EDTGLGPQWLELEITESLAMKDVAFTEKTLIELRKMGITLAIDDFGTGYSSLNYLKRLPI 861 Query: 664 DLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQ 723 D+LKID SFI ++ + S D I+++I L KM VVAE VE +E + D MQ Sbjct: 862 DILKIDRSFIHDLNTESDDVAIISAIITLGHNLKMKVVAEGVETKEQLMFLRQQQCDLMQ 921 Query: 724 GYLIGKPQPLIDTLN 738 GYL KP P+ + Sbjct: 922 GYLFTKPLPVRELEQ 936 >UniRef50_Q3JAR2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Nitrosococcus oceani RepID=Q3JAR2_NITOC Length = 944 Score = 719 bits (1858), Expect = 0.0, Method: Composition-based stats. Identities = 110/486 (22%), Positives = 204/486 (41%), Gaps = 18/486 (3%) Query: 271 AVVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLA 330 + S + IYP + T + +S + F+ + + T ++ +R+ LA Sbjct: 457 TGQWQGELWSQRKNGEIYPLWVTANAVRNSKEEITHFVAIFSDI--TLRKQTEQRLYYLA 514 Query: 331 YVDPVVHLPNVRALNRAL--------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQK 382 + D + LPN L R A+ ++ + + + G + ++ Sbjct: 515 HHDALTGLPNRSLFLDRLEHAIHHAQRHHHRIAVLFIDLDRFKFINDTLGHPIGDILLKQ 574 Query: 383 LSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLKQF---RFFWDGMPMQP 439 ++ + + + + +L G++ + + + I+ + + F G + Sbjct: 575 VAERMRLNIRAEDTIARLGGDEFTVIIENFTDTSAISLITQKIISACEKPFNIKGNELFV 634 Query: 440 QIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNR 499 + + +LL + A + ++ + + +++A+ N Sbjct: 635 SASIGVSLYPEDGHEASMLLQRAD--AAMYQAKKRGKSCCQFFTTEINTAATEQLALKNL 692 Query: 500 LQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSI 557 L++AL F L QPI M V E L+R LISP++F+P+A E GL + Sbjct: 693 LRRALARKEFQLYYQPIINMESGAIVSVEALIRWVDPELGLISPNTFIPLAEENGLILPL 752 Query: 558 DMWVIEHTLQFMAENRAKMP-AHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFE 616 WV++ P R AINLS + Q F VS++L K L E Sbjct: 753 GEWVLQTACTQAKIWNQSNPYPVRIAINLSARQLEQTDFSERVSEILKKTPFPTDHLELE 812 Query: 617 VTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNI 676 +TES + ++ + TL L+++GC++++DDFGTGY+ A LK D +KID SF++ I Sbjct: 813 LTESMLINRMESSLKTLNTLKKMGCRLSLDDFGTGYSPLAYLKRFPIDTVKIDRSFVQGI 872 Query: 677 VSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDT 736 + D I ++ +A K V+A+ VE E + + +D QGY I P P + Sbjct: 873 SIDPDDAAITTAVTTMAHSLKRAVIAKGVETREQLNFLNEIKVDEAQGYFISYPVPAEEL 932 Query: 737 LNEIEP 742 ++ Sbjct: 933 TQKLRE 938 >UniRef50_C5JAR6 Conserved uncharacterized protein n=1 Tax=uncultured bacterium RepID=C5JAR6_9BACT Length = 922 Score = 719 bits (1858), Expect = 0.0, Method: Composition-based stats. Identities = 116/538 (21%), Positives = 200/538 (37%), Gaps = 24/538 (4%) Query: 223 LGALLLLLCMPLNEKSTIFSTNYTLSLLLPLM--MWGAMRYGYKLISLLWAVV-----LM 275 + + T Y ++ + + R L LW + Sbjct: 379 VVITNAEGIIQYVNPRFSQVTGYASKEVIGKKPSILKSGRTPAALYDSLWETISAGKEWR 438 Query: 276 ISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPV 335 + + + ++ + I +S ++ +I + ++ R+ R A D + Sbjct: 439 GELMNRKKDGSLFWQHAIISPIRDNSGVITHYISVKEDISI--RKEYEERLVRQANYDAL 496 Query: 336 VHLPNV--------RALNRALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWL 387 LPN +A+ +A R AL L + + + G ++ + L Sbjct: 497 TGLPNRILAMDRLKQAIAQAQRYNRKVALMLLDLDDFKKVNDTLGHAAGDLLLKEAALRL 556 Query: 388 SPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLKQF---RFFWDGMPMQPQIGVS 444 L G+ V +L G++ L L + + + F G + Sbjct: 557 VDCLREGDTVARLGGDEFVLLLPDLTDTSSAEVVAEKILAACNQPFDVGGHEAYIAGSIG 616 Query: 445 YCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQAL 504 LL+ + A + + + R + + + M ++L+ A+ Sbjct: 617 IAIFPDDERDPILLMRNAD--AAMYRSKREGKGVFRYFTPEMNARALEHMRMESQLRHAI 674 Query: 505 EHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVI 562 E N + QP+ V E LLR +SP+ F+P+A E GL SI WV+ Sbjct: 675 ERNEMKVHYQPLVDSGTGRLVGAEALLRWSNPVLGEVSPEQFIPLAEETGLILSIGAWVL 734 Query: 563 EHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNA 622 + A + A+N+S + V L + + L E+TES Sbjct: 735 RTACRDAASWQRPDHEIFVAVNISGKQFQKRTLVEIVRSSLNESGLPPACLELELTESVL 794 Query: 623 LTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLD 682 L + ++ +Q L+ LG AIDDFGTG++S + L+ D LKID SFI+++ N D Sbjct: 795 LEHTQETLSIIQELESLGVGFAIDDFGTGFSSISYLRRFPFDTLKIDRSFIKDLGDNEGD 854 Query: 683 YQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEI 740 +V SI +A + VV E VE RE + G QG+L +P P D I Sbjct: 855 ADLVKSIIAMANSMSLKVVGEGVETHGQREFLRLSGCHIAQGWLYSRPIPGKDFQELI 912 >UniRef50_C7RK65 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RK65_9PROT Length = 1327 Score = 719 bits (1858), Expect = 0.0, Method: Composition-based stats. Identities = 104/526 (19%), Positives = 198/526 (37%), Gaps = 27/526 (5%) Query: 232 MPLNEKSTIFSTNYTLSLLLP--LMMWGAMRYGYKLISLLWAVV-----LMISIHSYQNY 284 + ++ T YT ++ M + + +W + + + + Sbjct: 799 IIAVNRAFTEITGYTEDEVIGRNPRMLQSGFQDRRFYLDMWQALGTQGRWRGELWNRRKD 858 Query: 285 IPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRAL 344 + T + + V ++ + + T R ++ A+ DP+ LPN L Sbjct: 859 GQTFLESLTISAVKDAQGKVAHYVGVFSDI--TELRRAHDQLDHQAHHDPLTGLPNRLLL 916 Query: 345 NRAL--------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGED 396 L RD A+ ++ + + + G + + +++ L L+ + Sbjct: 917 GDRLHKALQRAHRDETGLAVFFIDLDRFKNINDTLGHQVGDRVLCEVAWRLGRLMRESDT 976 Query: 397 VYQLSGNDLALRLNTESHQERITALDSHLKQF----RFFWDGMPMQPQIGVSYCYVRSPV 452 V +L G++ + + ++ + + + Sbjct: 977 VGRLGGDEFLIVIEDVGEPTAVSHIAEKILNVLQASPVTV-EHEFFVGASIGISVFPQDG 1035 Query: 453 NHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLM 512 L+ + + N L + ++ M L++A+E + Sbjct: 1036 ADAETLMKNADVA--MYRAKERGRNTYEFFTKDLTQTSLARLQMETDLRRAIERGELRVY 1093 Query: 513 AQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMA 570 QP + V E L+R L+ P F+ +A E GL I WV A Sbjct: 1094 LQPQFSLATGKVVGAEALVRWLRPQQGLVLPGEFIKLAEESGLIVPIGEWVQGTAACQWA 1153 Query: 571 EN-RAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQA 629 A + ++N+S + R + L + A L E+TES +++ + + Sbjct: 1154 TWVAAGLAPGVLSVNVSGVEFARGRIQQTARRTLELSGLPARFLELEITESAIMSHAENS 1213 Query: 630 QITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASI 689 L +L+ +G + IDDFGTGY+S A LK + + LK+D SF+R + +++ D I ++ Sbjct: 1214 VQVLDNLRAMGISLVIDDFGTGYSSLAYLKRLPLNKLKVDQSFVRGLPNDTEDCAIARAV 1273 Query: 690 CHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLID 735 L ++ V+AE VE E RE + G D MQGYL G+P P D Sbjct: 1274 IALGHSLQLTVIAEGVETEAQREFLTGEGCDEMQGYLRGRPMPFDD 1319 >UniRef50_A1K5Q6 GGDEF/EAL/PAC/PAS-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K5Q6_AZOSB Length = 828 Score = 719 bits (1856), Expect = 0.0, Method: Composition-based stats. Identities = 123/535 (22%), Positives = 222/535 (41%), Gaps = 25/535 (4%) Query: 231 CMPLNEKSTIFSTNYTLSLLLP--LMMWGAMRYGYKLISLLWAVV-----LMISIHSYQN 283 + + T Y + ++ + + R+G +W + I + + Sbjct: 278 IIQSVNPAFSRITGYAEAEVIGCHTRILQSGRHGADYYRAMWRTLARTGQWQGEIWNRRK 337 Query: 284 YIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRA 343 +YP + T T+ V +++ + + ++ + +++RLA+ DP+ LPN Sbjct: 338 TGEVYPQWLTIGTVRDDEGEVSNYVAVFSDI--SQIKDAQSQLERLAHYDPLTGLPNRAL 395 Query: 344 LNRAL--------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGE 395 L L R A+ +L + G + + + G + Q ++ L L Sbjct: 396 LGDRLAHAISRARRAGTSVAVLFLDLDGFKNVNDSLGHPAGDRLLQIIAERLCGALRSEG 455 Query: 396 DVYQLSGNDLALRLNTESHQERITALDSHLKQF---RFFWDGMPMQPQIGVSYCYVRSPV 452 V + G++ A+ L E ++ + HL DG + Sbjct: 456 SVSRFGGDEFAVVLEDVVRGEAVSEVAEHLIAEIARPLDLDGHGAHVSASIGIALFPRDG 515 Query: 453 NHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLM 512 + L+ +T + N + + ++++ + L+QALE F L Sbjct: 516 DDATTLIKAADTA--MYRSKALGRNTFSFHHEDMAQAAHRRLSLEHGLRQALEQGRFELW 573 Query: 513 AQPITGMRGDV--YHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMA 570 QP +R V E LLR + L+SP F+P+A E GL I +WV+E + Sbjct: 574 YQPQIDLRTGVLAGAEALLRWRDPERGLVSPAEFVPLAEETGLILPIGLWVLEEACRAGR 633 Query: 571 ENRA-KMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQA 629 + R A+N++ + + F V+++L+ + L E+TE + L + + A Sbjct: 634 AWLDVGLAPGRIAVNVAAPQIERGGFDQAVARVLSASGLPPAALEVEITEGSLLRSAENA 693 Query: 630 QITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASI 689 ++ + L+ LG +AIDDFGTGY+S A LKN+ LKID F+R++ ++ + I +I Sbjct: 694 RLAVAALRALGVGVAIDDFGTGYSSLAYLKNLAVQTLKIDREFVRDLPHDAGNLAITRAI 753 Query: 690 CHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIR 744 + R VVAE VE ++S G QGYL KP P + + R Sbjct: 754 IAMCRSLGFGVVAEGVEEPAQAAFLVSEGCTLAQGYLFAKPMPGAEFAEWLRTYR 808 >UniRef50_Q2W154 Putative uncharacterized protein n=2 Tax=Magnetospirillum RepID=Q2W154_MAGSA Length = 802 Score = 718 bits (1855), Expect = 0.0, Method: Composition-based stats. Identities = 118/567 (20%), Positives = 224/567 (39%), Gaps = 27/567 (4%) Query: 201 SQLKQQVDAKVTKKEFALWLLALGALLLLLCMPLNEKSTIFSTNYTLSLLLP--LMMWGA 258 Q +QQ+ T E A +++ + ++ + + Y+ +L + + Sbjct: 241 HQRRQQLRKLETALEQA--PVSVMITDSHGAIEYVNRAFVLVSGYSEDEVLGRNPRLLKS 298 Query: 259 MRYGYKLISLLWAVV-----LMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMA 313 L +W + + + ++ Y T I +V F+ Sbjct: 299 GETVASLYRDMWHCLASGATWQGELCNRAKDGSLFWEYATISPIRDDDGVVTHFMAVKEN 358 Query: 314 VLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRA--------LRDAPWSALCYLRIPGME 365 + T+++ +++ A D + LPN L R+ L +L + + Sbjct: 359 I--TQRKETEQQLVHQATHDTLTGLPNRLLLEDRVHHAIEVAKREGRRIGLMFLDLDRFK 416 Query: 366 MLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHL 425 ++ + G + + + +S L L + V +L G++ + L + + + Sbjct: 417 IVNDSLGHVAGDELLKVVSDRLRHTLRRSDTVARLGGDEFVVVLTHFQSTTELAEVAEKI 476 Query: 426 ---KQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRG 482 G + + ++ L+ + +T + N Sbjct: 477 SAALDEPVELSGHKVHVGASIGIAIYPDDGDNFNALMKDADTA--MYRAKQKGRNTFCFY 534 Query: 483 AMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELIS 540 + E D++ + L++AL F L QP ++ E L+R +S Sbjct: 535 DSNMNDEALDRLKLEEALRRALVRGEFQLFYQPQVDLQTGRTSGVEALIRWNSPERGQVS 594 Query: 541 PDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENR-AKMPAHRFAINLSPTSVCQARFPVEV 599 P F+PVA E L S I WV+E + + +A R A + + A+N+S + Sbjct: 595 PALFIPVAEESNLISMIGWWVLEESCRQIAAWREAGLTGIKVAVNVSGRQFLNHALVECI 654 Query: 600 SQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLK 659 S L+A+Y + QL E+TES + +A L L+E+G Q+++DDFGTGY+S + LK Sbjct: 655 SDLMAQYAVLPSQLEIELTESTVMAEPDRAIEQLTRLREIGIQVSVDDFGTGYSSLSYLK 714 Query: 660 NVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGI 719 + +K+D SF+R++ + S + IV++I LA M +VAE VE E + + G Sbjct: 715 RLPLSTIKVDRSFVRDVNNQSDNAAIVSAILGLADALDMSIVAEGVETEGEEQHLKDAGC 774 Query: 720 DYMQGYLIGKPQPLIDTLNEIEPIRES 746 +QG+ KP P + Sbjct: 775 IKVQGFRYAKPMPADQLAAWMLRQGRG 801 >UniRef50_C5D2J8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacillus sp. WCH70 RepID=C5D2J8_GEOSW Length = 568 Score = 718 bits (1854), Expect = 0.0, Method: Composition-based stats. Identities = 102/529 (19%), Positives = 208/529 (39%), Gaps = 24/529 (4%) Query: 232 MPLNEKSTIFSTNYTLSLLLPL--MMWGAMRYGYKLISLLW-----AVVLMISIHSYQNY 284 + + T Y+ ++ + + + + +W V I + + Sbjct: 38 ILFVNPAFEIVTGYSAEEVIGKNPRILQSGMHDKQFYKKMWNDIKQHGVWKGEIWNKRKD 97 Query: 285 IPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRAL 344 +Y + T + + +++ + + T + V ++ RLA D + ++PN L Sbjct: 98 GELYLEWLTISVVKDQKGNMTNYVAMFSDI--TEHKRNVEQLTRLALYDTLTNVPNRYLL 155 Query: 345 NRALR--------DAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGED 396 + L AL +L + + + G + ++ + L +L + Sbjct: 156 EKRLESIIRMSKKHNQSFALLFLDLDRFKNINDTLGHRVGDMLLKETAQRLKRMLRKQDT 215 Query: 397 VYQLSGNDLALRLNTESHQERITALDSHL---KQFRFFWDGMPMQPQIGVSYCYVRSPVN 453 + + G++ + L H + + + F ++ + + Sbjct: 216 IARFGGDEFVIILPNLKHIREAAYMAEKIVESLKRPFCFNHQEIYISTSIGISVYPYDGT 275 Query: 454 HIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMA 513 L+ + + N + K + L++ALE F L Sbjct: 276 DKETLIRMADRA--MYQAKKNGRNQYALYHAGMHGNGKQLFQLETALRKALERGEFELYY 333 Query: 514 QPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAE 571 QP ++ E L+R ISP F+P+A E GL + I W++ + + + Sbjct: 334 QPQLDIKTKQIRAVEALIRWNHPEKGFISPGMFIPLAEESGLITPISDWIMMQACEHLKQ 393 Query: 572 NRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQI 631 + + P + +IN+SP Q F ++ + + + + E+TES + + +Q+ Sbjct: 394 LQLRFPYVKMSINISPIYFQQIDFLKKLQKTIESVNVNPRLIELELTESAVMPHAEQSVE 453 Query: 632 TLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICH 691 L L+ +G IAIDDFGTG++S + L D+LKID SF + + D IV +I Sbjct: 454 RLTKLKTMGMSIAIDDFGTGFSSLSYLHRFPIDILKIDRSFTKQLSRYQQDSAIVKAIIM 513 Query: 692 LARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEI 740 +A ++ VVAE VE ++ + + D++QGY + KP + + + Sbjct: 514 MAHSLQIRVVAEGVETKKQYQILEKQSCDFVQGYYVSKPLSISELYEFL 562 >UniRef50_Q608F9 Sensory box protein n=1 Tax=Methylococcus capsulatus RepID=Q608F9_METCA Length = 965 Score = 716 bits (1850), Expect = 0.0, Method: Composition-based stats. Identities = 114/532 (21%), Positives = 207/532 (38%), Gaps = 26/532 (4%) Query: 236 EKSTIFSTNYTLSLLLP--LMMWGAMRYGYKLISLLWAVV-----LMISIHSYQNYIPIY 288 + T Y+ ++ M + R+ W + I + I+ Sbjct: 435 NPAFETITGYSAGEVVGRTPRMLQSGRHDGAFYRRFWRALETEGHWSGEIWNRHRDGHIF 494 Query: 289 PGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL 348 P + + + ++ + + + + +I+ L+Y D + LPN L Sbjct: 495 PAWQSVSAVKGPDGSTTHYVSIFTDI--SEFKRAEAQIRYLSYHDDLTGLPNRAYFQARL 552 Query: 349 --------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQL 400 RD AL L + + + + G + + +++ + G+ V + Sbjct: 553 DQLIEAAARDRKQIALVVLDLDRFKTINDSLGHSVGDELLCQVAERIQDCTGQGDFVARQ 612 Query: 401 SGNDLALRLNTESHQERITALDSHLKQF--RFFWDGMPMQPQIGVSYCYVRSPVNHIYLL 458 G++ + L ++ + G + + L Sbjct: 613 GGDEFVVILADSDAVRAARVANAMISAIAKPAVAGGRTLIVTPSLGISLYPHDAGDSESL 672 Query: 459 LGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITG 518 + + A + + N + + + +++A+ N L QAL + F L QP Sbjct: 673 IKSAD--AAMYHAKSLGRNTYQFFSAEMSAVATERLALENALHQALSNGEFRLYYQPQIE 730 Query: 519 MRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRA-K 575 + + E L+R + + P F+P+A E G+ I WV+E + E +A Sbjct: 731 VCSRRLIGLEALIRWRHPEVGWVPPLRFIPLAEETGIIHRIGRWVLEEACRQQREWQAAG 790 Query: 576 MPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQH 635 + A+NLSP + + FP +V LL+ ++ L E+TE+ + +V + L+ Sbjct: 791 LCIVPVAVNLSPLQLQKDDFPEQVEALLSGCRLAPGLLELELTETAVMRDVGRMSDMLRK 850 Query: 636 LQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARM 695 L+E G + +IDDFGTGY+S L D LKID SFIR++ I +I LA+ Sbjct: 851 LKERGTRFSIDDFGTGYSSLGYLNRFPVDKLKIDQSFIRDVTRREDHAAITRAIIALAKQ 910 Query: 696 KKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIRESA 747 + VVAE VE E E + G D QG+ +P P + + RE A Sbjct: 911 LHLKVVAEGVETAEQLEFLERAGCDGAQGFYFSRPVPADEIAGWLS--REGA 960 >UniRef50_B1XZA8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Bacteria RepID=B1XZA8_LEPCP Length = 1147 Score = 716 bits (1849), Expect = 0.0, Method: Composition-based stats. Identities = 130/534 (24%), Positives = 218/534 (40%), Gaps = 26/534 (4%) Query: 232 MPLNEKSTIFSTNYTLSLLLPL--MMWGAMRYGYKLISLLWA-----VVLMISIHSYQNY 284 + ++ YT + +L M + R+ + A + I + Sbjct: 613 IVSVNRAFTTLLGYTETEVLGQTPRMLSSGRHDRDFYEAMQAQLDHTGLWQGEIWNRHKD 672 Query: 285 IPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRAL 344 P + + V ++ + + T + R++ LA+ DP+ HLPN Sbjct: 673 GSPVPELLSISAVRDPHGQVTHYVGVFTDI--THLKESEARLEFLAHHDPLTHLPNRLLF 730 Query: 345 NRAL--------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGED 396 N L R+ A+ L + + + +YG + + + ++ L+ L + Sbjct: 731 NNRLDQALHQAEREGRRLAVLLLDLDRFKDINDSYGHLAGDELLKYVAQRLTQRLRQSDT 790 Query: 397 VYQLSGNDLALRLNTESHQERITALDSHLKQ-FRFFW---DGMPMQPQIGVSYCYVRSPV 452 + +L G++ AL ++ H + L S L W +G+ + + + C Sbjct: 791 LARLGGDEFALLMHDLRHDDDAARLASELLSGLSEPWRSSEGVEVSVGVSIGICIYPDHG 850 Query: 453 NHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLM 512 LL + A L + R A + R ++++ + RL++AL L Sbjct: 851 RTPQTLLQGAD--AALYRAKGDGRGVYRYYADEMTRIARERLHIEARLRRALADGQLLLH 908 Query: 513 AQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMA 570 QP +R + E L+R + LI P F+PVA GL I WV+ + Sbjct: 909 YQPQVDLRSGRIIGAEALVRWQDPEQGLIPPVRFIPVAEATGLIGEIGAWVLGEACRQAR 968 Query: 571 EN-RAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQA 629 A +PA A+N+SP QA +V Q+L + + L E+TE + +A Sbjct: 969 AWLDAGLPALTVAVNVSPRQFHQADLATQVMQVLVETGLPPTHLELELTEGALMEREAEA 1028 Query: 630 QITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASI 689 LQ L+ LG +AIDDFGTGY+S A LK D+LKID SFI +I + D +I A+I Sbjct: 1029 LQVLQRLRGLGVGVAIDDFGTGYSSLASLKRFPIDVLKIDRSFITDIPDDPDDMEIAAAI 1088 Query: 690 CHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPI 743 + +LV+AE VE E + D QG+L +P P + Sbjct: 1089 IAMGHSLGILVLAEGVETAEQLAFLQQRNCDRYQGFLRSRPLPAQAFEQLLREQ 1142 >UniRef50_Q1NQ51 PAS:GGDEF:EAL n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NQ51_9DELT Length = 751 Score = 714 bits (1845), Expect = 0.0, Method: Composition-based stats. Identities = 122/562 (21%), Positives = 213/562 (37%), Gaps = 28/562 (4%) Query: 201 SQLKQQVDAKVTKKEFALWLLALGALLLLLCMPLNEKSTIFSTNYTLSLLLP--LMMWGA 258 Q ++ + +W A+ + + T Y ++ + + Sbjct: 194 RQQLEEWLRQSAMVYENMWEGAVITDPAGTILD-VNPAFSRITGYAKDEVIGKNPRILKS 252 Query: 259 MRYGYKLISLLWAVV-----LMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMA 313 R+ +W + I + + +YP + + ++ + ++ + Sbjct: 253 DRHEQAFYQHMWRELIEKGQWRGEIWNRRKNGEVYPEWLSISGVSDARGQTSYYVGVFTD 312 Query: 314 VLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL--------RDAPWSALCYLRIPGME 365 + ++ + +++ LAY DP+ LPN L+ L R + ++ + Sbjct: 313 L--SQLKQSEAKLESLAYYDPLTALPNRLLLHSRLEHALEWAERHQTKVGVYFIDLDQFR 370 Query: 366 MLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHL 425 ++ ++ Q +S L + + + G++ L + + T L Sbjct: 371 VVNESLSYQAGDQLLVMVSKRFLSCLRVDDTLARPGGDEFVLIQEALADPQEATETAREL 430 Query: 426 K---QFRFFWDG-MPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRR 481 F DG + + LL A + N Sbjct: 431 LASLDQPFQLDGGQEIYLGASIGITVFPGDGTTPPDLLKNAE--AAMYHAKENGRNRFSF 488 Query: 482 GAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPI---TGMRGDVYHEILLRMKGENDEL 538 A + + ++ M L+QA+E+ L QP + E L+R + + EL Sbjct: 489 YAEQMNADALARLQMEMALRQAVENRELLLYYQPQWQLADSPSVIGAEALIRWRNKEGEL 548 Query: 539 ISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMP-AHRFAINLSPTSVCQARFPV 597 I+PD F+P+A + GL +I WVI+ + + R + R A+N+S Sbjct: 549 IAPDQFIPLAEKSGLIGAIGDWVIDEACRQLRIWRDQGKKQLRVAVNVSARQFRAGNLAE 608 Query: 598 EVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYAR 657 V+Q L K++I A E+TES + ++A L LG IA+DDFGTGY+S A Sbjct: 609 VVAQALRKHEIPAHCFELELTESILMEKPEEAAELLNRCAALGVGIALDDFGTGYSSLAY 668 Query: 658 LKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSL 717 L +LKID SF+R++ S I SI LA + VVAE VE EE R + S Sbjct: 669 LSRFPITVLKIDRSFVRDLNHRSEAALIADSIIALAHRMGLQVVAEGVETEEQRAYLQSR 728 Query: 718 GIDYMQGYLIGKPQPLIDTLNE 739 G D QG+L P P Sbjct: 729 GCDLAQGFLFSPPLPAEQFAEF 750 >UniRef50_C6WZ79 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WZ79_METML Length = 1250 Score = 714 bits (1844), Expect = 0.0, Method: Composition-based stats. Identities = 127/592 (21%), Positives = 234/592 (39%), Gaps = 30/592 (5%) Query: 175 GNLIGVPLCYFIIRVVRNPFYLRSYYSQLKQQVDAKVTKKEFALWLLALGALLLLLCMPL 234 G + Y + + R L + KQ ++ +K + + + Sbjct: 663 GTAAILGWFYDVTDLRRAQDALLLSEALAKQSLEELKYQKYALDKHAIVAVTDVKGRITY 722 Query: 235 NEKSTIFSTNYTLSLLLPL--MMWGAMRYGYKLISLLWAVVLMISIH-----SYQNYIPI 287 + Y++ LL + + + ++ V + + + Sbjct: 723 ANDKFSEISGYSIEELLGQDHAILNSGYHPKGYFKEMYRTVANGQVWHDEICNRAKDGSL 782 Query: 288 YPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRA 347 Y TT S+I + T+++A + LA DP+ +LPN R L Sbjct: 783 YWVDTTIAPFIGDDGKPQSYISIRTDI--TQRKAAEDKSNYLALYDPLTNLPNRRLLLDR 840 Query: 348 L--------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQ 399 L R AL +L + + L G + Q+++ L+ + G+ V + Sbjct: 841 LTHALASAMRTGRGGALLFLDLDHFKTLNDTLGHDVGDLLLQQVAECLTACVREGDTVAR 900 Query: 400 LSGNDLALRLNTESHQE-----RITALDSHLKQ---FRFFWDGMPMQPQIGVSYCYVRSP 451 L G++ + L S QE + + + + + G V Sbjct: 901 LGGDEFVVILEGLSEQEVEAAAQAEVVGEKILNKFIEPYQFKGYEYHITSSVGITLFGKN 960 Query: 452 VNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFL 511 LL + + + N +Q ++ +V M + L++AL+ N F L Sbjct: 961 NLKSDELLKQADIA--MYQAKKLGRNALSFFDPKMQEGIQARVDMEHELRKALDKNEFQL 1018 Query: 512 MAQPITGMRGD-VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMA 570 Q G+ V E L+R LI P+ F+ +A + G+ SI WVI+ + Sbjct: 1019 FYQMQVGLSDRAVGAEALIRWIHPERGLIPPNEFVSIAEDCGMILSIGAWVIDTACAQLK 1078 Query: 571 ENRA--KMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQ 628 + + ++N+S QA F +V+ +A++ I L E+TES L +++ Sbjct: 1079 RWEQSERTRSLTLSVNVSAKQFRQADFVEQVTTAIARHGINPMLLKLELTESALLDHIED 1138 Query: 629 AQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVAS 688 A + L+++G + ++DDFGTGY+S L+ + LKID SF+R+I S+ + IV + Sbjct: 1139 AVAIMNALKDIGIRFSLDDFGTGYSSLQYLRLLPLYQLKIDRSFVRDIASSIGNQAIVRT 1198 Query: 689 ICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEI 740 I +A + V+AE VE + + +L G + QGYL +P P+ + Sbjct: 1199 IIAMAHTLNLNVIAEGVETQVQQGILLDSGCMHYQGYLFSEPVPIDAFEALL 1250 >UniRef50_B9Z192 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z192_9NEIS Length = 943 Score = 714 bits (1843), Expect = 0.0, Method: Composition-based stats. Identities = 115/536 (21%), Positives = 218/536 (40%), Gaps = 33/536 (6%) Query: 232 MPLNEKSTIFSTNYTLSLLLPLM--MWGAMRYGYKLISLLWA-----VVLMISIHSYQNY 284 + ++ T + +L M + R+ +W+ + + + Sbjct: 404 IRSVNRAFSQITGFGQQEVLGQKPDMLSSGRHDETFYEAMWSAINEHGSWQGELWNRRKN 463 Query: 285 IPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRAL 344 +YP + + ++ + ++ + + + ++A RIQ LA+ D + LPN + Sbjct: 464 GEVYPEWLAISAVRNAVGEITHYVAIFSDL--SERKAADERIQFLAHFDVLTGLPNRAHI 521 Query: 345 NRALRDAPWSALCYLRIP------------GMEMLVKNYGIMLRIQYKQKLSHWLSPLLE 392 + A +A + + ++ G Q L+ + L Sbjct: 522 QDRVELAIQNATR----DNERLALLLLDLDRFKTINESLGHSAGDALLQVLAERIRSTLL 577 Query: 393 PGEDVYQLSGNDLALRLNTESHQERITALDSHLKQF---RFFWDGMPMQPQIGVSYCYVR 449 GE V + G++ + L + +++ + + Sbjct: 578 TGEVVARQGGDEFIVLLPLIADPGSAALAAERIREVLEPPVELFNHSISITPSIGISVFP 637 Query: 450 SPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHF 509 L+ + A + +A N + L ++ + + ++L+ AL+ + F Sbjct: 638 DDGRDFETLVRNAD--AAMYHAKSAGRNSYKFYTADLNARAREILEIESQLRYALDRDEF 695 Query: 510 FLMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQ 567 L QP ++ + E L+R + L+ P F+ VA E G I WVI+ + Sbjct: 696 VLHYQPQVDLKTGEIIGAEALIRWQHPELGLLGPVRFIEVAEERGFIVQIGNWVIQEACR 755 Query: 568 FMAENR-AKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNV 626 +A+ R +P A+NLS Q V + + L+ + + L EVTES + +V Sbjct: 756 QLAQWRRQGLPRISLAVNLSTLQFRQQDLAVHLQRALSAHGLVGSDLDVEVTESVIMDDV 815 Query: 627 KQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIV 686 + T+ ++ +G Q++IDDFGTGY+S + LK AD LKID SF+R+I ++ D I Sbjct: 816 ETTIHTIDRIKSMGLQLSIDDFGTGYSSLSYLKRFKADKLKIDRSFVRDIPMDADDSAIA 875 Query: 687 ASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEP 742 +I ++A+ M V+AE VE E + + G QGYL+ KP P + +E Sbjct: 876 RAIINMAKNLNMTVIAEGVETIEQWKFLDREGCHAAQGYLLAKPVPAKEFERLLEK 931 >UniRef50_C9P6X4 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Vibrio metschnikovii CIP 69.14 RepID=C9P6X4_VIBME Length = 919 Score = 713 bits (1841), Expect = 0.0, Method: Composition-based stats. Identities = 125/528 (23%), Positives = 221/528 (41%), Gaps = 31/528 (5%) Query: 236 EKSTIFSTNYTLSLLLPLMM--WGAMRYGYKLISLL-----WAVVLMISIHSYQNYIPIY 288 ++ T Y +L + + R+ L I + + Y Sbjct: 381 NQAFTDITGYQPKDVLGHHIKVIRSGRHNQSFYDELELQLKTQGSWQGEIFNKRKNGEEY 440 Query: 289 PGYTTQLTI-TSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRA 347 +T + + + ++++ + + T+++A +I++LA+ D + LPN + L Sbjct: 441 LQWTMITAVISDHEDEIINYVITLIDI--TQRKAAESKIKQLAFYDQLTGLPNRQLLMER 498 Query: 348 L--------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQ 399 L R+ + A+ YL + + L G ++ +S L + + V + Sbjct: 499 LESARLNSQRNGQYGAILYLDLDDFKTLNDTRGHDTGDKFLTLVSQRLLDCVRRTDTVAR 558 Query: 400 LSGNDLALRLNTESHQERITA-----LDSHLKQ---FRFFWDGMPMQPQIGVSYCYVRSP 451 + G++ + L I + L + ++ D + + + Sbjct: 559 IGGDEFVIILEQLDSDLDIASKRADLLCRKILDTLSKPYYIDNIEHFSTLSIGVTLFLGE 618 Query: 452 VNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFL 511 I LL + + A N R +Q ++ + AM N ++ AL N F L Sbjct: 619 TKGIDELLKHADLA--MYQAKGAGRNTHRFFNPEMQAKVLEHAAMANDIRHALTRNEFTL 676 Query: 512 MAQPITGMRGD-VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMA 570 QP G E L+R + ISP F+P+A E GL + WV++ Q +A Sbjct: 677 YYQPQVTHDGQLTGAEALIRWQHPKQGTISPIEFIPIAEETGLILPLGEWVLDQACQVLA 736 Query: 571 ENRAK--MPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQ 628 + + AIN+S Q F +V + L +Y+ +L E+TES +++ Sbjct: 737 VWQNSPLTDSLVLAINISAKQFHQTGFVQQVLEALQRYRANPDRLKLELTESMLHEDLED 796 Query: 629 AQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVAS 688 + L++ G ++DDFGTGY+S LK + D LKID SF+R++++NS D I + Sbjct: 797 TITKMSQLKKYGVSFSLDDFGTGYSSLNYLKRLPLDQLKIDKSFVRDLLTNSHDADIART 856 Query: 689 ICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDT 736 I LA+ + V+AE VE +E R A+ S G QGYL +P PL Sbjct: 857 IVSLAKSMNLAVIAEGVETQEQRLALASYGCLDFQGYLFSRPVPLEAF 904 >UniRef50_Q1K2Z8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K2Z8_DESAC Length = 1288 Score = 712 bits (1840), Expect = 0.0, Method: Composition-based stats. Identities = 114/536 (21%), Positives = 212/536 (39%), Gaps = 27/536 (5%) Query: 232 MPLNEKSTIFSTNYTLSLLLPL--MMWGAMRYGYKLISLLWAVV-----LMISIHSYQNY 284 + ++ T Y +L + + R+G +W + I + + Sbjct: 755 IVSVNRAFSDITGYRDDEVLGQTPRILKSNRHGRDFYQNMWHCLAEHGCWQGEIWNRRKD 814 Query: 285 IPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRAL 344 +YP + + V +I + + ++ + ++ L++ DP+ LPN Sbjct: 815 GQVYPELMSMSAVCDDQQEVSHYIAVFTDI--SQAKESQEKLDYLSWHDPLTDLPNRSLF 872 Query: 345 --------NRALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGED 396 A R A+ + + + ++G ++ +K++ L L + Sbjct: 873 CTHLDQAVKHAERKHHSFAVLCFDLDHFKDVNDSFGHLVGDALLRKIADRLRSCLRESDM 932 Query: 397 VYQLSGNDLALRLNTESHQERITALDSHL-----KQFRFFWDGMPMQPQIGVSYCYVRSP 451 + +L G++ L L + R+T + + + + +Q + V Sbjct: 933 LARLGGDEFVLLLEDVADSHRVTMMAEEILHQLQQPICLTETDLEVQVSVSVGIAVYPEH 992 Query: 452 VNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFL 511 LL ++ L + + +++V + L+QALE F + Sbjct: 993 GRDALELLQRADSA--LYRAKQHGRARFAYYNEEMTEQAQERVQLSFHLRQALEKKEFAV 1050 Query: 512 MAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFM 569 QP + V E L+R L++PD F+P+A E G S+ W++ + Sbjct: 1051 YYQPQVDLGTGQIVGAEALMRWNSPELGLVTPDRFIPLAEEIGCICSMGTWILRQVCEQG 1110 Query: 570 AEN-RAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQ 628 A P A+NLS + + + L + A L EVTES + +Q Sbjct: 1111 KAWLDAGYPPLTLAVNLSAVQFAEEDIACRLKETLQETGYPAEYLELEVTESTLMHKEQQ 1170 Query: 629 AQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVAS 688 L+ L ELG ++A+DDFGTGY+S A LK LLK+D SFI ++ +++ D ++V + Sbjct: 1171 TIDLLKSLNELGVRLALDDFGTGYSSLAYLKYFPLHLLKVDKSFIDDLPADANDCKMVTA 1230 Query: 689 ICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIR 744 I + ++AE VE R+ + LG DY QGY P P + + + Sbjct: 1231 IVQMGHGLGFDLLAEGVETVAQRDCLAQLGCDYYQGYYCSPPVPACEFAALRQSQK 1286 >UniRef50_B3E661 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=cellular organisms RepID=B3E661_GEOLS Length = 1027 Score = 712 bits (1840), Expect = 0.0, Method: Composition-based stats. Identities = 124/536 (23%), Positives = 215/536 (40%), Gaps = 24/536 (4%) Query: 232 MPLNEKSTIFSTNYTLSLLLPL--MMWGAMRYGYKLISLLWAVV-----LMISIHSYQNY 284 + K I T ++L + + + ++ LW + + + + Sbjct: 496 IEYVNKKFIQLTGFSLEEAVGKNPRILKSEATPPEVFVDLWKTILSGREWRGELLNRRKN 555 Query: 285 IPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRAL 344 +Y T+ + + S + FI N + ++ I+ LAY DP+ LPN R L Sbjct: 556 GEVYWSITSISPLRNDSGEITHFIANVEDIN--ERKNAEATIEHLAYFDPLTDLPNRRML 613 Query: 345 NRAL--------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGED 396 L R AL YL + + + + G ++++ S ++ + Sbjct: 614 QDRLELALRRSRRHGSNVALMYLDLDSFKHVNDSMGHPAGDLLLKEMAGRFSGVVRDDDV 673 Query: 397 VYQLSGNDLALRLNTESHQERITALDSHLKQF---RFFWDGMPMQPQIGVSYCYVRSPVN 453 V +L G++ AL L+ + + + L + DG + + Sbjct: 674 VCRLGGDEFALILHDIHQDQDVVPIAQKLIEAVAQPVPLDGREVVVTASIGIALFPRDGG 733 Query: 454 HIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMA 513 + L + L +N R L + ++A+ L+ A E L Sbjct: 734 DVKNLEKHADIA--LYHAKEEGKNTFRFYLEELNSTISTRIALEQGLRYAKERQELELHY 791 Query: 514 QPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAE 571 QP + E LLR + L+SP F+P+A + L I WV+ + Sbjct: 792 QPKVCVASGKVSGVEALLRWHSPDFGLVSPIRFIPLAEQTRLIIPIGEWVLRTACLQQVQ 851 Query: 572 NRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQI 631 R + A+NLS + V+ ++ + I+ L E+TES + N + Sbjct: 852 WREQGLLLNMAVNLSAIQLKSPGLVERVAAIIDETGIQPEHLELELTESALVNNPDEVVQ 911 Query: 632 TLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICH 691 L+ L+ LGC I+IDDFGTGY+S + LK+ +LKID SF+R++ NS D I S+ Sbjct: 912 LLERLRTLGCSISIDDFGTGYSSLSYLKSFPVTILKIDRSFVRDLAHNSGDRAIARSVVD 971 Query: 692 LARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIRESA 747 LA M VAE VE+EE + +G Y+QG++ +P + + +A Sbjct: 972 LANNLDMKTVAEGVESEEQLTILQQIGCTYIQGFIYSRPVQADQVSAVVRRLGGAA 1027 >UniRef50_C6WVK9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WVK9_METML Length = 1329 Score = 712 bits (1839), Expect = 0.0, Method: Composition-based stats. Identities = 121/530 (22%), Positives = 215/530 (40%), Gaps = 26/530 (4%) Query: 232 MPLNEKSTIFSTNYTLSLLLPL--MMWGAMRYGYKLISLLWAVV-----LMISIHSYQNY 284 + + T Y ++ M + + S +W + + + + Sbjct: 802 IISVNNAFTTITGYEAKEVVGKNPHMLASEKLEESFYSAMWDSIGVMGYWQGEVINQRKN 861 Query: 285 IPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRAL 344 IY + + TI + + I + + ++ RIQ L+ DP+ +LPN L Sbjct: 862 GEIYTQWLSISTIKDADGKISQHIGIISDI--SERKVAEERIQFLSNFDPLTNLPNKNLL 919 Query: 345 NRA--------LRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGED 396 N R L ++ + + + ++ G + Q ++L+ + P + Sbjct: 920 NDRTKLALATAKRLKTAVTLMFVDLDRFKFINESLGPSIGDQVVKELAERFVAYMRPEDT 979 Query: 397 VYQLSGNDLALRLNTESHQERITALDSHLKQF---RFFWDGMPMQPQIGVSYCYVRSPVN 453 V + G++ L L + E + L F + G + + Sbjct: 980 VCRQGGDEFILLLPN-TDAEGAAHVAKKLLDIVAQPFNFHGQKIVLTASIGISAYPQDGE 1038 Query: 454 HIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMA 513 L + A L N + A + + D + + + L+ A+EH F L Sbjct: 1039 SFEQLAQSAD--AALYRAKYEGRNNFQFFARQMHEQAHDILLLESELRSAIEHEEFLLYY 1096 Query: 514 QPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAE 571 QP + + E L+R + L+SP F+P+A E GL + I WV+ ++ +A Sbjct: 1097 QPQYDSKTSKIIGLEALIRWQHPEKGLVSPAVFIPIAEESGLIAEIGDWVLRTAVKQLAS 1156 Query: 572 NR-AKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQ 630 + A + A A+NLS Q V Q+L +++ L E+TE A+ + ++ Sbjct: 1157 WQEAGLGAVPVAVNLSVVQFHQDTLYGSVCQILRDTKVDPSMLELELTEGIAMEDSERTL 1216 Query: 631 ITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASIC 690 L L LG +++IDDFGTGY+S + LK D LKID SF+R I S+ D I+ +I Sbjct: 1217 NVLNQLNSLGVRLSIDDFGTGYSSLSYLKKFKIDKLKIDQSFVRGIGSHPQDAAIITAII 1276 Query: 691 HLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEI 740 +A+ +AE VE E +++ D +QGY KP P + + Sbjct: 1277 SMAKSLSFKTIAEGVETLEQLNFLIANSCDEIQGYYFSKPLPSTEVTKLL 1326 >UniRef50_A4G4R7 Putative uncharacterized protein n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G4R7_HERAR Length = 859 Score = 712 bits (1838), Expect = 0.0, Method: Composition-based stats. Identities = 114/531 (21%), Positives = 203/531 (38%), Gaps = 26/531 (4%) Query: 231 CMPLNEKSTIFSTNYTLSLLLPLM--MWGAMRYGYKLISLLWAVVLMISIH-----SYQN 283 + + +T Y L ++ M + + + +WA + + ++ Sbjct: 328 TIEYANTTFSTNTGYALHDIIGKKPNMHKSGKTSRATYADMWAHLGRGESWQGEFINRRH 387 Query: 284 YIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRA 343 + + + ++ + T Q+ RI+ LA+ D + LPN Sbjct: 388 NGEERIDLVRVSPVREADGRITHYLAIEEDI--TNQKNAQARIESLAHFDVLTGLPNRAL 445 Query: 344 LNRALRDAPWSA--------LCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGE 395 L+ + A A + +L + + + G L +L+ L +L + Sbjct: 446 LDERAQRALRLAEEDQATLAVMFLDLDHFKNINDTLGHNLGDTLLVELAQRLRAVLRRDD 505 Query: 396 DVYQLSGNDLALRLNTESHQERITALDSHL---KQFRFFWDGMPMQPQIGVSYCYVRSPV 452 + +L G++ L L +++E + L + + + + Sbjct: 506 TLSRLGGDEFVLLLPG-ANRESAKKIAQELMRAINEPYRIGSHELNVMASIGIAVYPADG 564 Query: 453 NHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLM 512 L + + N R +Q + ++N L+QA+ + Sbjct: 565 MDFETLCKNADVA--MYRAKQEGRNAYRSFTQEMQAYSTRYLQVLNALRQAIAQEQLHVH 622 Query: 513 AQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMA 570 QP + + E LLR ISP F+P+A E GL I WV+ + Sbjct: 623 YQPQISLISGDVIGAEALLRWHHPELGNISPAEFIPIAEESGLILQIGEWVLRVAVAQAK 682 Query: 571 ENRA-KMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQA 629 + + A+NLS A P V Q+L + L E+TE A+ + + A Sbjct: 683 KWHQLGLDKLIIAVNLSAVQFRHAGLPNLVMQILKEEDFPPQYLELELTEGVAMHDPQGA 742 Query: 630 QITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASI 689 + L E G +++IDDFGTGY+S + LK A LKID SF+R+I +++ D IV++I Sbjct: 743 IAMMNSLHERGVRMSIDDFGTGYSSLSYLKQFKAYKLKIDQSFVRDISTDAEDKAIVSAI 802 Query: 690 CHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEI 740 +A+ + +AE VE E + + G QGY KP P D I Sbjct: 803 IGMAKNLGLQTIAEGVETAEQQAFLREEGCHEAQGYHYSKPLPAADFETFI 853 >UniRef50_Q21WS3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21WS3_RHOFD Length = 1034 Score = 711 bits (1837), Expect = 0.0, Method: Composition-based stats. Identities = 114/536 (21%), Positives = 209/536 (38%), Gaps = 30/536 (5%) Query: 231 CMPLNEKSTIFSTNYTLSLLLPL--MMWGAMRYGYKLISLLWAVVLMISIHS-----YQN 283 + + Y + ++ + + +WA +L I + Sbjct: 500 LIEYVNPMFEQVSGYRRAEVMGQNPRILSSHEKSEDEYREMWATLLAGDIWHGEFHSRRK 559 Query: 284 YIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRA 343 ++ I ++ + T+++A I+ LA+ D + LPN R Sbjct: 560 DGSLFWEQAAIAPIFDDHGRPIHYLAIKEDI--TKRKAAEAEIEHLAFYDLLTGLPNRRL 617 Query: 344 LNRAL--------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGE 395 LN L R AL ++ + + L G Q+++ L+ + + Sbjct: 618 LNDRLQQVLAVGTRSRRHGALLFIDLDNFKNLNDTQGHEQGDVLLQQVAQRLNFCVRECD 677 Query: 396 DVYQLSGNDLALRLNTESHQE-----RITALDSHLKQF---RFFWDGMPMQPQIGVSYCY 447 V +L G+D + L S Q+ + + + + + V Sbjct: 678 TVARLGGDDFVVMLQDLSEQQTEAATQAEGVGQKILDALHQPYPFGHFTHHGSASVGVAL 737 Query: 448 VRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHN 507 + + + LL + L +A N R +Q + + M ++ L+ N Sbjct: 738 FNASQDTVEELLKRADLA--LYQAKDAGRNTLRFFDPDMQAVISARAEMEADMRLGLQEN 795 Query: 508 HFFLMAQPITGMRGD-VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTL 566 F L QP G + E L+R + L++P F+P+A + GL + WV+E Sbjct: 796 QFLLYYQPQVNHAGRLIGVEALVRWQHPLRGLVAPAHFIPLAEDTGLILPLGQWVMEAAC 855 Query: 567 QFMAEN--RAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALT 624 + + +A A+N+S F +V LA+ A +L E+TES + Sbjct: 856 RQLQLWRTQAHTAQLTIAVNVSALQFHGESFVSDVLATLARTGAPADRLKLELTESLLVK 915 Query: 625 NVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQ 684 +V + L+ G ++DDFGTGY+S + LK + D +KID SF+ + +SN D Sbjct: 916 DVDGVIAKMVALKAHGVGFSLDDFGTGYSSLSYLKRLPLDQIKIDQSFVSDALSNPKDAA 975 Query: 685 IVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEI 740 +V + + R M+V+AE VE + R+ + G QGY G+P P+ + + Sbjct: 976 LVRATVAMGRGLGMMVIAEGVETQMQRDFLEGEGCLNFQGYFFGRPVPVAELACFL 1031 >UniRef50_C6P5X9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P5X9_9PROT Length = 927 Score = 711 bits (1837), Expect = 0.0, Method: Composition-based stats. Identities = 111/531 (20%), Positives = 201/531 (37%), Gaps = 26/531 (4%) Query: 231 CMPLNEKSTIFSTNYTLSLLLPL--MMWGAMRYGYKLISLLW-----AVVLMISIHSYQN 283 + + T Y + +L ++ + R+ +W + + Sbjct: 398 LIIAVNPAFEQMTGYAAAEVLGKNPRIFKSGRHDRAFYHSMWLALDTEGYWHGEVWDKRK 457 Query: 284 YIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRA 343 Y T I ++ + + + T ++ V I R A D + LPN + Sbjct: 458 NGEEYIKLLTINVIRDDDGAIYRHVALFTDI--TERKKVEELIWRQANYDSLTKLPNRQM 515 Query: 344 LNRALRD--------APWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGE 395 + L AL + + + + G + + +S + + Sbjct: 516 FHDRLEQEAKKAHRAGLSMALLLIDLDRFKEVNDTLGHDKGDILLIEAARRISACVRESD 575 Query: 396 DVYQLSGNDLALRLNTESHQERITALDSHLK---QFRFFWDGMPMQPQIGVSYCYVRSPV 452 V +L G++ + L+ I + + F D P + + Sbjct: 576 TVARLGGDEFIVILSELEDMASIDRVAQDILGSLAEPFKLDAEPAYISASIGISLYPNDA 635 Query: 453 NHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLM 512 + +L + + + A N +Q + ++ + N L+ A+ F + Sbjct: 636 TELDVLFKHADQA--MYVAKYAGRNRFNYFTKDMQEAAQARMHLANDLRIAVAAGQFRVY 693 Query: 513 AQPITGMRGDVY--HEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMA 570 QPI M E L+R + ++SP F+P+A E GL I WV +Q + Sbjct: 694 YQPIVEMSSGQIYKAEALIRWQHPVRGMVSPAEFIPLAEETGLIVPIGEWVFRQAVQQVV 753 Query: 571 ENRAKM-PAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQA 629 + R K + + ++N SP A + L + + +I E+TE L + Sbjct: 754 QWRRKFHRSFQISVNKSPVQFRHAESLSW-PEYLEQQHVSGDSIIVEITEGLLLDAEVEV 812 Query: 630 QITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASI 689 L ++ G Q+AIDDFGTGY+S + LK + D LKID SF+RN+ + D + +I Sbjct: 813 NKKLLRFRDAGIQVAIDDFGTGYSSLSYLKEFDIDYLKIDQSFVRNLGPGTSDLALCEAI 872 Query: 690 CHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEI 740 +A V+AE VE E + + G DY QGYL +P P + ++ Sbjct: 873 IVMAHKLGFKVIAEGVETSTQHELLAAAGCDYGQGYLYSRPLPPEEFERQL 923 >UniRef50_A8FYM5 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain-like protein n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8FYM5_SHESH Length = 1055 Score = 711 bits (1836), Expect = 0.0, Method: Composition-based stats. Identities = 111/521 (21%), Positives = 200/521 (38%), Gaps = 18/521 (3%) Query: 238 STIFSTNYTLSLLLPLMMWGAMRYGYKLISLLWAVVLMISIHSYQNYIPIYPGYTTQLTI 297 S I + LL +M + + + + Y+ + + T + + Sbjct: 532 SQIEVVGQSPQLLQSDRPIQSMLHNREAALKK-NDIWQCEVSGYRKNGEHFLSWQTVIPV 590 Query: 298 TSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNV--------RALNRALR 349 + I + + T ++ I LA+ D + LPN AL RA R Sbjct: 591 KDENGDTQQIIYIFSDI--TERKLFEEHIYNLAHHDSLTQLPNRVAFQLQMNTALERAKR 648 Query: 350 DAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRL 409 A+ ++ + +M+ G + Q+++ L + + + G++ + L Sbjct: 649 SKTQMAVMFIDLDHFKMINDTSGHPVGDLLLQQVAERFKRALRKEDVISRFGGDEFTVLL 708 Query: 410 NTESHQERITALDSHLKQF---RFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVA 466 + T + L F + + + + L+ ++ Sbjct: 709 SNTRTDNATTVVARKLLACFYEPFKLPSSEVVISASIGIGVFPDNGDSVDSLMMNADSA- 767 Query: 467 ELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDV-YH 525 + N + + + ++++ + L++ALE + F L QP G + Sbjct: 768 -MYRAKEKGRNCFQFYTKEMNQYAQERLELELDLRKALERDEFVLHYQPQFDPNGRIIGC 826 Query: 526 EILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAEN-RAKMPAHRFAIN 584 E L+R + + L+SP F+ +A GL I WVI+ PA ++N Sbjct: 827 EALIRWQHPDKGLLSPGEFINMAEITGLIVPIGKWVIDTACMQHKMWLSQGYPALNISVN 886 Query: 585 LSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIA 644 LS V + I L E+TES + NV++ TL + LG ++ Sbjct: 887 LSGRQFLHHDLLETVKNAITTSGITPSCLELELTESIMMVNVEETIRTLNAISSLGIHMS 946 Query: 645 IDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEY 704 IDDFGTGY+S + LK + LKID SF+R + + D IV SI +A + V+AE Sbjct: 947 IDDFGTGYSSMSCLKRFPVNKLKIDQSFVRGLPQDKEDVAIVKSIIVMAHALNLTVIAEG 1006 Query: 705 VENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIRE 745 VE E E + S + QGY +P D ++ + + Sbjct: 1007 VETLEQLEFLKSSRCEEFQGYYFSRPILAADIEQYLQALAD 1047 Score = 135 bits (340), Expect = 8e-30, Method: Composition-based stats. Identities = 46/259 (17%), Positives = 90/259 (34%), Gaps = 32/259 (12%) Query: 8 IKIRDKWWGLPLFLPSLILPIFAHINTFAHISSGEVFLFYLPLALMISMMMFFSWAALPG 67 +K ++ L L + + + V + P + IS ++ F + PG Sbjct: 6 LKHHLRYLALCATLS-FVYYLSGRLGLSLAFEQAGVSPVWPPTGIAISAVLIFGFRVWPG 64 Query: 68 IALGIFVRKYAELGFYETLSLTA--NFIIIIILCWGGYRVFTPRRNNVSHGDTRLISQRI 125 I LG + + + L A N + I+ + R + Sbjct: 65 IMLGALLVNLSIALPFSAAILIALGNTLEAIVAGYLLIR--------CAERYPFTQVNHT 116 Query: 126 FWQIVFPATLFLILFQFAAFVGL-LASRENLVGVMPFNLGTLINYQALLVGNLIGVPLCY 184 W + ++ F+A +GL S NL+ + + +VG L+ VPL Sbjct: 117 AW----FIAIAVMAPMFSATIGLVSLSMHNLIEASELGIVWSTWWLGDIVGALVIVPLL- 171 Query: 185 FIIRVVRNPFYLRSYYSQLKQQVDAKVTKKEFALWLLALGALLLLLCMPLNEKSTIFSTN 244 + + + ++ V ALW L +L L L + + Sbjct: 172 -------------LTWFRPHESMNGGVPV--MALWGTCLVSLGLALLIFSPWHTEYDPHQ 216 Query: 245 YTLSLLLPLMMWGAMRYGY 263 + ++LPL++W A+R+ + Sbjct: 217 LLIFMMLPLLIWTALRFHH 235 >UniRef50_A1STH5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Psychromonas ingrahamii 37 RepID=A1STH5_PSYIN Length = 962 Score = 711 bits (1836), Expect = 0.0, Method: Composition-based stats. Identities = 111/529 (20%), Positives = 196/529 (37%), Gaps = 26/529 (4%) Query: 232 MPLNEKSTIFSTNYTLSLLLPL--MMWGAMRYGYKLISLLWAVVLMISIH-----SYQNY 284 + I T Y+ +L + + + +WA + I + + Sbjct: 418 IEYVNNMFIKVTGYSRDEVLGQNPRILKSGKTPQTTFKEMWAHLTRGDIWHGEIINRRKD 477 Query: 285 IPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRAL 344 IY T + + + +++ + T ++ + LAY D + LPN R L Sbjct: 478 KSIYIESATITPVKQADGKITNYVAIKEDI--TEKKKAEAYTENLAYFDQLTGLPNRRML 535 Query: 345 N--------RALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGED 396 A + + +L + + + + G + Q K++ + + + Sbjct: 536 QAQVKYRLNMAQSNHQPLTVMFLDLDNFKNINDSLGHTVGDQVLIKIAKRIKKAIREVDT 595 Query: 397 VYQLSGNDLALRLNTESHQER---ITALDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPVN 453 V +L G++ + T L + + + + + N Sbjct: 596 VSRLGGDEFIMLFPNTDANAAMHIATTLIQEISKASVVEHN-ELTITPSIGIAIYPNDGN 654 Query: 454 HIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMA 513 LL T + V N N +Q + + N L+ AL+ N L Sbjct: 655 DFKTLLKNAETA--MYRVKNDSRNGFHFVTPEMQLSASRNLQLENALRHALKRNELQLYY 712 Query: 514 QPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAE 571 QP + E LLR +ISP F+P+A G I WV+ ++ Sbjct: 713 QPQISTSNGQIIGAEALLRWHHPELGMISPAEFIPIAESSGQIIEIGEWVLRTAIRQTKN 772 Query: 572 N-RAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQ 630 A+NLS Q ++ +LA+ Q+ L E+TE+ + + + Sbjct: 773 WMDDGFTPMIIAVNLSVVQFRQKNLLTLITDILAEVQLPNEYLELELTEAVTMHDPESVI 832 Query: 631 ITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASIC 690 + E G +++IDDFGTGY+S + LK LKID SFIR+I ++ D IV++I Sbjct: 833 NVMNTFHEQGIRMSIDDFGTGYSSLSYLKKFKVYKLKIDQSFIRDISNDPDDRAIVSAII 892 Query: 691 HLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNE 739 +A + +AE VE E + G +QGY KP P ++ Sbjct: 893 DMASNLGLQTIAEGVETAEQLAFLRLHGCHEVQGYYFSKPLPSVEFEQF 941 >UniRef50_A1RPJ9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=16 Tax=Proteobacteria RepID=A1RPJ9_SHESW Length = 1511 Score = 710 bits (1833), Expect = 0.0, Method: Composition-based stats. Identities = 121/529 (22%), Positives = 207/529 (39%), Gaps = 25/529 (4%) Query: 232 MPLNEKSTIFSTNYTLSLLLPLMMWG-AMRYGYKLISLLWAVV-----LMISIHSYQNYI 285 + + T Y+ + + A + +L + + + + I Sbjct: 979 IRSVNPAFSAITGYSERQITDKYLVHLAYKQQRELFNSIEQQLLRHKHWVGEIWIRNKQR 1038 Query: 286 PIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALN 345 + + F+ + + T ++ + ++ LA D + LPN Sbjct: 1039 KAILVWLEINQVIDIKGETSHFVAVFTDI--TERKKAEQDLRFLASFDTLTGLPNRTLFQ 1096 Query: 346 RALRDAPW--------SALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDV 397 L A AL +L + + + + G + + + L + G+ V Sbjct: 1097 DRLNHAITQAHRANNIVALLFLDLDRFKHINDSMGHHVGDLLLKAAAKRLQNAVREGDTV 1156 Query: 398 YQLSGNDLALRLNTESHQERITALDSHLK---QFRFFWDGMPMQPQIGVSYCYVRSPVNH 454 +L G++ + L + + T + + Q F + + + + ++ Sbjct: 1157 ARLGGDEFTIILEGVAKTKAATLISEKVLRAFQTPFLLEDKSLTISTSIGISLYPNDADN 1216 Query: 455 IYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQ 514 L+ +T + + N + L V + L+QA+ N L+ Q Sbjct: 1217 ADSLIKFADTA--MYHAKSLGRNNFQFYTHKLNEIATRHVLLEAGLKQAIHRNELSLVYQ 1274 Query: 515 PITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAEN 572 P +R E LLR ISP F+P+A E G+ + I WVI H Q +AE Sbjct: 1275 PKFSLRDGSLTGLEALLRWHHTELGPISPVEFIPLAEETGIINQIGHWVINHACQQLAEW 1334 Query: 573 RA-KMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQI 631 A A+NLS + A + LA + A L E+TES + N + + Sbjct: 1335 NALGFNNISMAVNLSARQLK-ADIISTIEVALAVSGLPAQSLELELTESMIMGNPQDSVS 1393 Query: 632 TLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICH 691 L L+ LG IAIDDFGTGY+S + LK D LKID F+R+I ++ D I ++I Sbjct: 1394 ILSKLKALGLTIAIDDFGTGYSSLSYLKRFPIDTLKIDREFVRDITNDPDDAAITSAIIA 1453 Query: 692 LARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEI 740 LA ++ VVAE VE + + G D +QG+L+ KP D L + Sbjct: 1454 LAHSLELNVVAEGVETQAQLNFLGLQGCDEVQGFLLSKPLSAKDCLTLL 1502 >UniRef50_B2JN77 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=2 Tax=Burkholderia RepID=B2JN77_BURP8 Length = 915 Score = 710 bits (1833), Expect = 0.0, Method: Composition-based stats. Identities = 122/583 (20%), Positives = 233/583 (39%), Gaps = 40/583 (6%) Query: 201 SQLKQQVDAKVTKKEFALWLLALGALLLLLCMPLNEKSTIFS--------TNYTLSLLLP 252 +L ++ A+V + E L + A+ L M + TI T YT ++ Sbjct: 333 MRLASKMTAEVRESEAELRIAAVAFDSLEGMMVTDADGTILRVNSAFTKCTGYTADDVIG 392 Query: 253 --LMMWGAMRYGYKLISLLWAVV-----LMISIHSYQNYIPIYPGYTTQLTITSSSYLVF 305 + + R+ +W + I + IYP + T + + V Sbjct: 393 RNPRLLSSGRHDAAFFRDMWETIHRVGGWQGEIWDRRKNGEIYPKWLTITAVKAVDGNVT 452 Query: 306 SFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL--------RDAPWSALC 357 ++ + + T ++ +I+ LA+ D + HLPN L L ++ AL Sbjct: 453 HYVGTHYDI--TERKLAEEQIKELAFFDALTHLPNRTLLRDRLKQVIALSAQNHTHGALL 510 Query: 358 YLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQER 417 ++ + + L G +++ L + G+ V ++ G++ + L+ S Sbjct: 511 FVDLDNFKTLNDTLGHDKGDLLLGQVAVRLLGSVREGDTVARMGGDEFVIVLSDLSRNRD 570 Query: 418 ITA-----LDSHLK---QFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELS 469 A + ++ G + + I LL + + + Sbjct: 571 EAASETEGAAEKVLTALSRPYYLAGTEFRTTASIGATLFTGHETSIDELLKQSDLA--MY 628 Query: 470 IVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPIT-GMRGDVYHEIL 528 + N +Q + ++ A+ L++A++ + + Q E L Sbjct: 629 KSKESGRNAICFFDPAMQTVVMERAALEAALRRAIDEDQLLVHYQAQVLNGNRVTGAEAL 688 Query: 529 LRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAEN--RAKMPAHRFAINLS 586 +R + L+ P F+P+A E GL ++ V++ + +A+ R A+N+S Sbjct: 689 VRWQHPQHGLVPPAEFIPLAEETGLILALGDRVLDTACRQLAQWSLRPDRAHLSIAVNVS 748 Query: 587 PTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAID 646 + + F V + LA+ + +L E+TES + NV+ + L+ G ++D Sbjct: 749 AQQLRENSFVTSVLEALARTGADPSRLKLELTESVLVDNVEDIIRKMTLLRTKGVVFSLD 808 Query: 647 DFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVE 706 DFG GY+S + LK + LKID SF+R+++ + D I +I LA+ + V+AE VE Sbjct: 809 DFGVGYSSLSYLKRLPLGQLKIDRSFVRDVLDDPNDAVIARAIVALAQSLGLGVIAEGVE 868 Query: 707 NEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEP--IRESA 747 + R+ + G QGYL +P P+ D + RESA Sbjct: 869 TQAQRQFLADAGCHAYQGYLFCRPLPIEDFEAFADTFDSRESA 911 >UniRef50_C4L987 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L987_TOLAT Length = 1098 Score = 710 bits (1833), Expect = 0.0, Method: Composition-based stats. Identities = 118/530 (22%), Positives = 217/530 (40%), Gaps = 26/530 (4%) Query: 236 EKSTIFSTNYTLSLLLPLM--MWGAMRYGYKLISLLWAVV-----LMISIHSYQNYIPIY 288 ++ I Y + LL ++ + ++ + + + + + + Sbjct: 554 NRALIDLFGYPENELLGQRPRIFHSGKHDGHFYQQMLQALDEHGFWRGEMWNRRQNGELL 613 Query: 289 PGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNR-- 346 P T+ + S+ + +I Y + ++ + R++ +A DP+ LPN L + Sbjct: 614 PMMTSINPVCDSNGEILYYISIYTDI--SQLKDSEARLEHMALHDPLTGLPNRAMLGQKL 671 Query: 347 --ALRDA----PWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQL 400 AL+ A AL L + + + ++G + ++S L L + V +L Sbjct: 672 DSALQHAMLNSTRVALLMLDLDHFKNVNDSFGHHFGDELLHQVSARLKQQLRESDVVCRL 731 Query: 401 SGNDLALRLNTESHQERITALDSHL---KQFRFFW-DGMPMQPQIGVSYCYVRSPVNHIY 456 G++ + L + ++ L + F + + + + Sbjct: 732 GGDEFTVLLQNNPSPDDVSLLAERIIHALHQPFLLSNAREVMIGTSIGISLYPEHGSTAE 791 Query: 457 LLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPI 516 L+ + +T + + + R + L + K ++ + RL +A+ F + QP Sbjct: 792 ELMQQADTA--MYRAKHDGRDGYRYFSEELFLKAKARLELEQRLHRAITGQEFKVFYQPQ 849 Query: 517 TGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAEN-R 573 ++ + + E LLR LI P F+ VA E GL +I WV+ T + + Sbjct: 850 ISIKTNQIIGAEALLRWDDPEYGLIPPSEFISVAEETGLIQNIGEWVLYETCRQGRDWLD 909 Query: 574 AKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITL 633 +P A+NLSP + + +L A L E+TES + ++ L Sbjct: 910 QHLPPINLAVNLSPLQLHHGDVRQLIGTILHNSGFPAHHLELELTESALMEQQEETVKIL 969 Query: 634 QHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLA 693 Q L++ G +IAIDDFGTGY+S A LK D+LKID F+ +I D +I A+I + Sbjct: 970 QGLRQQGIRIAIDDFGTGYSSLAYLKQFPLDVLKIDKRFVEDIPHERDDMEIAATIVAMG 1029 Query: 694 RMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPI 743 ++ V+AE VE + E + G DY QGYL P P + + Sbjct: 1030 HSLRLTVLAEGVETKAQLEFLEQQGCDYYQGYLYSMPLPAEEFAQLLSQQ 1079 >UniRef50_A1TX84 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TX84_MARAV Length = 890 Score = 709 bits (1832), Expect = 0.0, Method: Composition-based stats. Identities = 119/505 (23%), Positives = 210/505 (41%), Gaps = 27/505 (5%) Query: 254 MMWGAMRYGYKLISLLWAVVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMA 313 + MR+G + +Y+ ++ + + + FI + Sbjct: 399 RLRNCMRHG---------GSARAILRNYRKDGSLFWNEVALAAVHNEHGEIAHFISVFND 449 Query: 314 VLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL--------RDAPWSALCYLRIPGME 365 V T ++ ++ A D + LPN L L R+ A+ L + + Sbjct: 450 V--TDRKRYEAALEYQANHDDLTGLPNRNLLRDRLEHAITKATREHTKLAVLLLDLDQFK 507 Query: 366 MLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHL 425 + G + Q+++ +S + + V +L G++ + + L L Sbjct: 508 RVNDGLGHKIGDTLIQRVASRMSQCVRDSDTVARLGGDEFMILSTDIRDERAAATLAQKL 567 Query: 426 -KQFR--FFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRG 482 +QFR +G + + ++ L +T + + N + Sbjct: 568 LRQFRQKVAINGHEIIASASIGIAMFPKDGDNGDELFRNADTA--MYRAKDVGRNGFQFY 625 Query: 483 AMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDV--YHEILLRMKGENDELIS 540 + + +++++ + L+ A+ + L QP + E L+R + +IS Sbjct: 626 SAEMNNRMRERLYLEQSLRNAIGLHQLSLWYQPKLDLASGSVKSAEALIRWRHPQLGMIS 685 Query: 541 PDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAK-MPAHRFAINLSPTSVCQARFPVEV 599 P F+P+A E GL I WVIE + +A+ R + R AIN+S + + +V Sbjct: 686 PGDFIPIAEETGLILPIGAWVIEEASRQLAKWRDQENQDIRVAINISAYQLSHGKLTDQV 745 Query: 600 SQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLK 659 Q L ++ L EVTE+ + + +A LQ L+E+G ++A+DDFGTGY+S LK Sbjct: 746 IQALDSLGLDPQSLTIEVTETAIMPQMDKAVCELQSLREMGIRVALDDFGTGYSSLTYLK 805 Query: 660 NVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGI 719 D+LKID SF+ +I + IV +I +LA M VVAE VE E E + + G Sbjct: 806 RFPIDILKIDRSFVSDIADDEESGAIVKTIINLAHNLNMTVVAEGVETEAQLEFLRTNGC 865 Query: 720 DYMQGYLIGKPQPLIDTLNEIEPIR 744 D +QGY KP P + L + R Sbjct: 866 DEVQGYYFCKPLPSEECLEFLRCRR 890 >UniRef50_Q1NRJ4 PAS:GGDEF:EAL:GAF n=5 Tax=Deltaproteobacteria RepID=Q1NRJ4_9DELT Length = 1052 Score = 709 bits (1830), Expect = 0.0, Method: Composition-based stats. Identities = 113/523 (21%), Positives = 208/523 (39%), Gaps = 26/523 (4%) Query: 243 TNYTLSLLLPL--MMWGAMRYGYKLISLLWAVV-----LMISIHSYQNYIPIYPGYTTQL 295 T Y+ + + + Y +W + + S + ++P + + Sbjct: 532 TGYSRQEAIGQNPRILQSGHYDADFYREMWDTLLTTGHWEGELWSRRKNNELHPKWLSIS 591 Query: 296 TITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRDA---- 351 + + ++ + AT + +++ L + D + LPN+ L+ A Sbjct: 592 AVYDQRGRITHYVGISNDLTAT--KQTQEKLEELTHYDQLTSLPNILLFRDRLQQAMARA 649 Query: 352 ----PWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLAL 407 AL + + + + G + +++ L L + + + G++ L Sbjct: 650 RREEHKVALLIFDLDRFKEVNDSLGHSVGDLVLTEVAQRLRQQLSLADTICRPGGDEFYL 709 Query: 408 RLNTESHQERITALDSHLKQF---RFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNT 464 L + + ++ + F + + + L+ + T Sbjct: 710 LLGRLTDIDTAVQAAQNVLELFSKPFQAADHQLYLTPSIGITLFPDDGEEVESLIQSVET 769 Query: 465 VAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPIT--GMRGD 522 + N + + ++ M NRL++A+E F L QP R Sbjct: 770 A--MYHAKKDGGNSFQFFQETMFTAALGRMTMKNRLRRAVELEEFELYYQPKIAADGRTV 827 Query: 523 VYHEILLRMKGENDE-LISPDSFLPVAHEFGLSSSIDMWVIEHTLQF-MAENRAKMPAHR 580 V E L+R +SP F+P+A E GL I WV+ + + +A +P R Sbjct: 828 VGAEALIRWVQPERGGPVSPAEFIPLAEETGLIIPIGEWVLRQACRQSLLWQQAGLPPLR 887 Query: 581 FAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELG 640 A+NLS Q E++ +L + + A L E+TES + +V A TL L+++G Sbjct: 888 IAVNLSAVQFKQPGLDDEINWILQEIGLPAELLELEITESLLMEDVTTANATLWKLKDMG 947 Query: 641 CQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLV 700 +A+DDFGTGY+S + LKN D LKID F+R++ ++ D ++ +I LA KM V Sbjct: 948 IHLALDDFGTGYSSLSYLKNFPLDTLKIDREFVRDLSTDDEDRAVIITIITLAHSLKMEV 1007 Query: 701 VAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPI 743 VAE VE+ + + G D QGY +P P + + Sbjct: 1008 VAEGVEDADQVAFLRQRGCDVFQGYHFSRPLPAKEFEQFLRSQ 1050 >UniRef50_D1U882 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U882_9DELT Length = 958 Score = 709 bits (1830), Expect = 0.0, Method: Composition-based stats. Identities = 110/530 (20%), Positives = 213/530 (40%), Gaps = 25/530 (4%) Query: 232 MPLNEKSTIFSTNYTLSLLLPL--MMWGAMRYGYKLISLLWAVV-----LMISIHSYQNY 284 M + T +T ++ + + +G + +W + I + + Sbjct: 422 MVAVNPAFTTITGFTSEEVIGKNPRVLKSDMHGEEFYGEMWTTLKARGSWHGEIWNRRKN 481 Query: 285 IPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRAL 344 YP + +I + +++ + + + + ++ Y D + LPN + Sbjct: 482 GESYPEILSISSIRDDDGEIANYVAVFHDI--SDMKHKEEQLAHHLYHDGLTGLPNRVLV 539 Query: 345 NRAL--------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGED 396 L R A+ +L + + + ++G + ++ L L + Sbjct: 540 LDRLSMALSHANRTGTKVAVLFLDLDNFKKINDSFGHAQGDTLLKAVAERLVALYRDEDT 599 Query: 397 VYQLSGNDLALRLNTESHQERITALDSHLK---QFRFFWDGMPMQPQIGVSYCYVRSPVN 453 V + G++ + + + + L L+ + F G + + Sbjct: 600 VARQGGDEFLVVVVDVHEEREVVDLAEGLQRVFEEPFVIKGQEVFITPSIGVTLYPDDGQ 659 Query: 454 HIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMA 513 L+ + + N + + ++ + + +++AL+ F + Sbjct: 660 DPASLVKNADMA--MYQSKAKGRNSYFLFTQQMSERIAQRLTLESDMRRALKEREFTVYF 717 Query: 514 QPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAE 571 QP + E L+R + ++SP+ F+P+A E GL + +V++ + + M Sbjct: 718 QPKVDLASGEVSGLEALVRWVKPDGIIVSPEDFIPMAEETGLIVPLGEFVLDASCKAMQV 777 Query: 572 NRA-KMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQ 630 + A A+NLSP Q V L + + A +L E+TES +T+V+ + Sbjct: 778 LQGVGCSALTVAVNLSPIQFGQEDLVEMVVANLERNGLPASRLELEITESTLMTDVQSSV 837 Query: 631 ITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASIC 690 L L ELG I+IDDFGTGY+S LKN LKID SFIR+I + D +IV ++ Sbjct: 838 AQLNRLVELGITISIDDFGTGYSSLYYLKNFPISTLKIDRSFIRDITIDDSDAKIVETVV 897 Query: 691 HLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEI 740 +AR + VVAE VE +E + + + G +QGY +P PL + + Sbjct: 898 LMARTMGIGVVAEGVETKEQLDLLATFGCATVQGYYYSRPLPLEKIIEFL 947 >UniRef50_Q47A14 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47A14_DECAR Length = 827 Score = 708 bits (1829), Expect = 0.0, Method: Composition-based stats. Identities = 123/537 (22%), Positives = 213/537 (39%), Gaps = 26/537 (4%) Query: 232 MPLNEKSTIFSTNYTLSLLLPLMMWGAMRYG-----YKLISLLW-AVVLMISIHSYQNYI 285 + +T T Y L+ ++G + + + Q Sbjct: 295 ILSINPATTEMTGYEPFELIGQTVFGLISLDEGISQKDFQEQISMRGSWSSELEVTQKNG 354 Query: 286 PIYPGYTTQLTITS-SSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRAL 344 +P + S L ++ + T ++ R++ +A D + LPN AL Sbjct: 355 SNFPAGARINRVDDPQSGLPAHYVWILADI--TERKQAEDRMRHIAQHDALTGLPNRLAL 412 Query: 345 NRAL--------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGED 396 L R A+ ++ + +++ G + + ++++ LS LL + Sbjct: 413 LMRLAQLLPEARRHGWTVAVMFIDLDRFKIINDTLGHQVGDEMLREVACRLSNLLRETDF 472 Query: 397 VYQLSGNDLALRLNTESHQERITALDSHLKQF---RFFWDGMPMQPQIGVSYCYVRSPVN 453 V +L G++ + L + S + + +G + + Sbjct: 473 VARLGGDEFVIILPSISSPADAAIVSGKIISALSTAIEAEGHELHTSPSIGISIFPDDGP 532 Query: 454 HIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMA 513 ++L +T + A N + A + R +++ + +L+ A+ N L+ Sbjct: 533 DGDIVLKNADTA--MYHAKAAGRNNYQFFAADMNRTAAERLNIERKLRHAIARNELSLVF 590 Query: 514 QPITGMR--GDVYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAE 571 QP E LLR D +ISP F+PVA E G+ I WV+ MA Sbjct: 591 QPQFRAEDTTPTGVEALLRWHHPTDGMISPARFIPVAEETGMIVEIGDWVLATACHEMAR 650 Query: 572 N-RAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQ 630 A + R A+N+S + + F V+ L + A L E+TES+ + N ++A Sbjct: 651 WINAGLKPLRIAVNVSARQLRRRDFCETVANALTTSGLPAELLELEITESSVMENPQEAI 710 Query: 631 ITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASIC 690 L+ L +G +AIDDFGTGY+S A LK D LKID SF+ +I + D I Sbjct: 711 HILERLGRMGVTLAIDDFGTGYSSLAYLKLFPIDHLKIDRSFVADIEHDLNDRAIAFGTI 770 Query: 691 HLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIRESA 747 LA + V+AE VE E+ E + + G D +QG+L KP + R++A Sbjct: 771 ALAHSLGLNVIAEGVETEDQHELLRANGCDEVQGFLFSKPLTGAAAFAFLH-ARDTA 826 >UniRef50_Q47IR9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47IR9_DECAR Length = 952 Score = 708 bits (1829), Expect = 0.0, Method: Composition-based stats. Identities = 120/534 (22%), Positives = 223/534 (41%), Gaps = 30/534 (5%) Query: 236 EKSTIFSTNYTLS--LLLPLMMWGAMRYGYKLISLLWA-----VVLMISIHSYQNYIPIY 288 ++ + T Y + + + + R+ +W V I + IY Sbjct: 423 NQAFLRDTGYAVEECVGQTPRILRSGRHDPAFYQKMWESIRSSGVWQGEIWDRRKDGSIY 482 Query: 289 PGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL 348 P + T + S V +I + V + ++ RI +LAY D V LPN L L Sbjct: 483 PKWLTISAVLGDSGEVTHYIGLHQDV--SERKLAESRIHQLAYYDQVTGLPNRILLQERL 540 Query: 349 RD--------APWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQL 400 + + L ++ + + L G + +++ L + V +L Sbjct: 541 SQVMAKCRASSNYGVLLFVDLDNFKTLNDTLGHNVGDLLLKQVGEVLRRCSRESDTVARL 600 Query: 401 SGNDLALRLNTESHQERITALDS------HLKQF--RFFWDGMPMQPQIGVSYCYVRSPV 452 G++ A+ ++ + L + F + + + + + Sbjct: 601 GGDEFAVIMSELGTDPSAAMQGAEAAARYLLSELGRTFQLGNVIHRNTVSIGATLFKGEQ 660 Query: 453 NHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLM 512 I L+ +++ + A N R ++ L+++ A+ L+ A+E F L Sbjct: 661 ESIESLMRQIDLA--IYQAKGAGRNTVRFFDPSMEIALRERAAIEEALRYAIEEEQFLLH 718 Query: 513 AQPITGMRGDV-YHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAE 571 Q G G + E+LLR + ++SP F+P+A E G + WV++ +A Sbjct: 719 YQAQIGEDGRIEGAEVLLRWQHPERGMVSPAIFIPLAEETGDIVLLGSWVLKQAAAQLAR 778 Query: 572 NRAK--MPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQA 629 M A+N+S + Q F +V+ +L + + +L E+TES + +V+ Sbjct: 779 WAESPVMAGLVLAVNVSAVQLRQPDFVEQVTTVLREAGADPGRLKLELTESMLVNDVEAT 838 Query: 630 QITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASI 689 +Q L+ +G ++DDFGTGY+S + LK + LKID SF+R+++ ++ D I +S+ Sbjct: 839 IAKMQSLKAIGIGFSLDDFGTGYSSLSYLKRLPLSQLKIDQSFVRDVLVDANDVAIASSV 898 Query: 690 CHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPI 743 LA+ + V+AE VE E RE + +G QGYL +P P+ D + Sbjct: 899 VALAKSLGLGVIAEGVETEAQRELLAGIGCHCYQGYLFSRPLPIGDFERLVSGA 952 >UniRef50_A1ALY4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ALY4_PELPD Length = 1238 Score = 708 bits (1828), Expect = 0.0, Method: Composition-based stats. Identities = 109/531 (20%), Positives = 211/531 (39%), Gaps = 26/531 (4%) Query: 232 MPLNEKSTIFSTNYTLSLLLPL--MMWGAMRYGYKLISLLWAVV-----LMISIHSYQNY 284 + ++ +T Y ++ + + + LW + Sbjct: 702 IVSVNQAFCATTGYRAEEIIGQSSLALRSDVHDGIYFRQLWRGIRKRGSWQGEFWCRHKN 761 Query: 285 IPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRA- 343 + P + T+ V ++I + + + Q++ +RIQ +A+ D + +LPN Sbjct: 762 GEVSPQWMVVNTVHDRQGTVTNYIALFTDI--SAQKSQEQRIQHIAHHDALTNLPNRLLC 819 Query: 344 -------LNRALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGED 396 L +A R+ A+ ++ + + + + G + ++ LS + G+ Sbjct: 820 MERLILALQQAHRNGRHVAVIFIDLDHFKNINDSLGHHVGDCVLVTAANRLSMGVRDGDT 879 Query: 397 VYQLSGNDLALRLNTESHQERITALDSH----LKQFRFFWDGMPMQPQIGVSYCYVRSPV 452 V +L G++ + L +I + H L + + G + + Sbjct: 880 VSRLGGDEFVIILADIEDSHQIEEIMKHRLLPLMRQPYDAGGYELHCSCSIGISIFPEDG 939 Query: 453 NHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLM 512 LL +T + N L ++++ L++ +E N L Sbjct: 940 LDKDTLLRNADTA--MYRAKEVGRNNYHFYTEELNSRAMQRLSIETSLRKGIERNELLLH 997 Query: 513 AQPITGMRGDV--YHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMA 570 QP + E LLR + + +ISP F+P+A E GL I VI + + ++ Sbjct: 998 YQPKLDLHTGKPYGLEALLRWQHPDHGMISPMEFIPIAEETGLIIPIGKQVIRNACRQLS 1057 Query: 571 ENRA-KMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQA 629 + M ++N+S RF ++ QL+ + + ++ E+TE+ + + + Sbjct: 1058 RWSSVGMSHICLSLNVSAVQFRDRRFVEDLVQLVREEGVSPHRIELELTETMLMEDAVRT 1117 Query: 630 QITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASI 689 ++ L++ G +IDDFGTGY+S L D LKID SFIR ++ D I+ +I Sbjct: 1118 IRVMETLKDEGFLFSIDDFGTGYSSLNYLHRFPIDCLKIDRSFIRGMLERPADLAIIKAI 1177 Query: 690 CHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEI 740 L M V+AE VE E+ A+ + G D +QGY + +P + Sbjct: 1178 IGLGHTLDMQVIAEGVEKEDEYRALRAAGCDGIQGYFVARPLTPEQVPEWL 1228 >UniRef50_A1K5K2 Conserved hypothetical signaling protein n=2 Tax=Proteobacteria RepID=A1K5K2_AZOSB Length = 1089 Score = 708 bits (1828), Expect = 0.0, Method: Composition-based stats. Identities = 116/530 (21%), Positives = 217/530 (40%), Gaps = 25/530 (4%) Query: 232 MPLNEKSTIFSTNYTLSLLLP--LMMWGAMRYGYKLISLLWAVVLMIS-----IHSYQNY 284 + + +T Y +L + + L V + +Y Sbjct: 552 IIYVNPAFTVTTGYGADEVLGRNARFLIDNDWDQPAVERLREAVREGGDARVTLRTYHKD 611 Query: 285 IPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRAL 344 + + +I + V FI + V T + +++ A D + L N L Sbjct: 612 GQLLWNEISLASIRDAQGEVSHFIAIFNDV--TERVRYEAELEQQATHDALTGLANRNLL 669 Query: 345 NRAL--------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGED 396 N + RD A+ L + +++ + G Q+ + LS + G+ Sbjct: 670 NDRMQRAIIRAARDGHAVAVMLLDLDRFKLINDSLGHAAGDALLQETARRLSASVRRGDT 729 Query: 397 VYQLSGNDLALRLNTESHQERITALDSHLKQ---FRFFWDGMPMQPQIGVSYCYVRSPVN 453 V +L G++ + ++ S ++ AL + + + +G + + Sbjct: 730 VARLGGDEFMVVMSDMSAEDAAAALAAKVLESLAEPMLLNGREIVATGSIGVSLYPRDGE 789 Query: 454 HIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMA 513 LL + + N + A + + +++ + N L++ALE++ L Sbjct: 790 AAATLLKHADVA--MYRAKELGRNRFQFYAPEMNERILERLELENSLRRALENDELELHY 847 Query: 514 QPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAE 571 QP +R + E L+R + ++SP F+P+A E GL I WV++H + + Sbjct: 848 QPKVSLRDGRVIGAEALIRWRHPQLGMVSPADFIPLAEETGLIVPIGEWVVDHACRQLRA 907 Query: 572 N-RAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQ 630 A +P A+N+S + +++ LA +++ QL EVTES + ++ Sbjct: 908 WLDAGLPQISVAVNVSARQFQHEQLTHVLARALAAHRLPPGQLHVEVTESAVMCEPERTI 967 Query: 631 ITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASIC 690 TL+ L+ +G +I++DDFGTGY S LK D +KID F+ ++ +++ D I I Sbjct: 968 FTLRELKNIGVRISLDDFGTGYCSLNYLKRFPIDSIKIDRCFVTDLATSAEDAAIALMIV 1027 Query: 691 HLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEI 740 LA V+AE VENE + + G D MQG+L +P P + + Sbjct: 1028 SLAHSLNQTVIAEGVENEAQLDFLRRHGCDEMQGFLFSRPLPAAEFARLL 1077 >UniRef50_A6T1A8 Sensory box/GGDEF family protein n=1 Tax=Janthinobacterium sp. Marseille RepID=A6T1A8_JANMA Length = 910 Score = 707 bits (1827), Expect = 0.0, Method: Composition-based stats. Identities = 112/534 (20%), Positives = 200/534 (37%), Gaps = 27/534 (5%) Query: 230 LCMPLNEKSTIFSTNYTLSLLLP---LMMWGAMRYGYKLISLLWAVVLMIS----IHSYQ 282 + + T YT + + + L + A+ + +Y+ Sbjct: 371 FAIEYVNPAFERITGYTAAEAIGRSSSFLLRNDHEQAGLYEIRAALAEKREGKAVLRNYR 430 Query: 283 NYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVR 342 ++ + F+ + T + + RLA D + LPN Sbjct: 431 KNGSLFWNDLYIAPVKDDEGKTTHFVAAMSDI--TPMKQYETTLHRLASHDVLTGLPNRA 488 Query: 343 ALNRAL--------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPG 394 L L R+ + + + + + G + +S L + Sbjct: 489 LLQDRLENAIAYSARNGHAVWVVLVDLDRFKFVNDTMGHQAGDVLLKIISDRLQASVRES 548 Query: 395 EDVYQLSGNDLALRLNTESHQER--ITALDSHLKQF---RFFWDGMPMQPQIGVSYCYVR 449 + V +L G++ L L + + + + G + Sbjct: 549 DTVARLGGDEFVLVLPECGDGPSGYSSDVIQRIMEAVVKPLTIQGSEFFLSCSMGIAVYP 608 Query: 450 SPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHF 509 + LL + + N + + + +++ + L+ A+E N Sbjct: 609 NDGADPTTLLAHADVA--MYRSKELGRNNFQFYTPAMNDQALERLRIEGELRHAIELNEL 666 Query: 510 FLMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQ 567 L QP + V E L+R ++ P SF+ +A E GL I WV++ + Sbjct: 667 VLHYQPQVDLHTGAIVGLEALVRWNHPILGMVQPGSFISLAEETGLIIPIGAWVLQTACR 726 Query: 568 FMAENRA-KMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNV 626 + R A+NLS QA + L + +EA L E+TES+ + ++ Sbjct: 727 QAKAWQDMGFTQLRIAVNLSARQFTQASLLESIKDTLQETGLEARFLEIELTESSVMADI 786 Query: 627 KQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIV 686 ++ +TL+ L+ LG Q+++DDFGTG++S A LK D LKID SF+R+I N D IV Sbjct: 787 ERNILTLRDLKSLGVQLSVDDFGTGHSSLAYLKRFPIDTLKIDRSFVRDIAINQDDASIV 846 Query: 687 ASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEI 740 +SI LA K+ V+AE VE + + + G + +QGY KP P + Sbjct: 847 SSIISLAHNLKLNVIAEGVETASQMDILRAQGCNEIQGYYFCKPLPSDQIETLL 900 >UniRef50_B3EBJ5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=B3EBJ5_GEOLS Length = 965 Score = 707 bits (1827), Expect = 0.0, Method: Composition-based stats. Identities = 111/465 (23%), Positives = 211/465 (45%), Gaps = 18/465 (3%) Query: 296 TITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL------- 348 I + S + I + T ++ I++LAY DPV LPN L+ L Sbjct: 495 CIFNQSGQAEAIIGMGRDI--TDRKTAESTIEQLAYHDPVTGLPNRTLLHDRLQLAINRA 552 Query: 349 -RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLAL 407 RD+ A+ +L + + + + G + Q + + + L + + V +L G++ + Sbjct: 553 ERDSQGVAILFLDLDRFKAINDSLGHAMGDQLLRLVGNRLLDCVRSSDTVARLGGDEFVV 612 Query: 408 RLNTESHQERITALDSHLKQ---FRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNT 464 ++ + + ++ + + + D + + LL + Sbjct: 613 LISALDNDHAVGSVVMKILEQLCEPYQIDDHEVYTSSSIGISLFPRDGRDAEELLKNADM 672 Query: 465 VAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD-- 522 + A N + L +++ + + +++ALE FFL+ QP +R Sbjct: 673 A--MYQAKEAGRNTCHFFSPELNMRATERLLLESTMRRALEREEFFLVYQPQMELRSGHI 730 Query: 523 VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRA-KMPAHRF 581 E LLR + + ++ P++F+P+A E GL + WV+ + + P R Sbjct: 731 AGIEALLRWRHPDLGVVPPNNFIPIAEETGLIVPLGEWVLAEACRQAVRWQQEGQPPLRM 790 Query: 582 AINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGC 641 A+N+S Q + + ++L + ++ L E+TES + N ++A +TL+ L+++G Sbjct: 791 AVNVSARQFRQRNLGLRIEKILMETGLDPALLELELTESAVMENPEEAILTLRQLKKMGI 850 Query: 642 QIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVV 701 ++IDDFGTGY+S + LK+ D LKID SF++++ + D I +I LA K+ VV Sbjct: 851 TLSIDDFGTGYSSLSHLKHFPIDRLKIDRSFVKHVTRDHNDATIAEAIIALAHSMKLTVV 910 Query: 702 AEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIRES 746 AE +E+ E E + D MQGY + +P + ++ + ES Sbjct: 911 AEGIEHSEQMEFMHQRHCDTMQGYYLSRPVTAEEFGTFLKRLGES 955 >UniRef50_B4B341 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B341_9CHRO Length = 1342 Score = 707 bits (1825), Expect = 0.0, Method: Composition-based stats. Identities = 110/545 (20%), Positives = 214/545 (39%), Gaps = 24/545 (4%) Query: 221 LALGALLLLLCMPLNEKSTIFSTNYTLSLLLPL--MMWGAMRYGYKLISLLWAVV----- 273 +++ + T Y + ++ + + + +W + Sbjct: 791 VSVVITDAEGTIEYVNPKFEKITGYQRAEVIGQNPRILKSGETTTEEYKQIWKTITSGQE 850 Query: 274 LMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVD 333 H+ + ++ + I ++ ++ F+ + T ++A + A D Sbjct: 851 WHGEFHNKKKNGELFWEAASISPIKNAEGIITHFVAVKEDI--TERKAQQTTLTYQANYD 908 Query: 334 PVVHLPNV--------RALNRALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSH 385 + LPN +A+ +A R A+ ++ + + + G QK+S Sbjct: 909 ALTGLPNRFLAIDRLKQAILQADRQKKRVAVMFIDLDHFKDVNDTLGHEYGDLLLQKVSQ 968 Query: 386 WLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLK---QFRFFWDGMPMQPQIG 442 L L + V +L G++ + L + S + + F Sbjct: 969 RLKQCLRKSDTVARLGGDEFLIILPNLRETHHCKLIASKILSSLEKPFNLLTEEAFISAS 1028 Query: 443 VSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQ 502 + N + +L+ + A + + N + M + E + ++ + L+ Sbjct: 1029 IGITLYPDDGNDVSVLMRNAD--AAMYLGKRGGRNDFKFYTMGMNEEAQSRLRIEKLLRY 1086 Query: 503 ALEHNHFFLMAQPITGMR--GDVYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMW 560 AL+ N F+L+ QPI +R + E LLR +SPD F+ +A E GL S + W Sbjct: 1087 ALKKNEFYLVYQPIIDLRFQTVIGAEALLRWNNPELGRVSPDQFISIAEETGLISELGAW 1146 Query: 561 VIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTES 620 VI Q + + + A+NLSP +++ +S + I L E+TE Sbjct: 1147 VISQACQEVVNWQTQGSPIWVAVNLSPRQFRESKLLEIISNAITLNGITNHYLELEITEK 1206 Query: 621 NALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNS 680 L + ++ ++ L E+ +++IDDFGTGY++ + L + LKID SFI +I N Sbjct: 1207 LLLEDFPGSKGIIEQLHEMDFRLSIDDFGTGYSALSYLIKFPFNRLKIDRSFIADIPHNQ 1266 Query: 681 LDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEI 740 +V +I + K+ V+AE VE E + + G DY QGY +P + + Sbjct: 1267 EVLALVKTIIAMGHGLKLQVIAEGVETTEQANILEAEGCDYAQGYFFSRPLLSEEFRRYL 1326 Query: 741 EPIRE 745 + + Sbjct: 1327 QSHQN 1331 Score = 47.7 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 5/69 (7%), Positives = 14/69 (20%), Gaps = 7/69 (10%) Query: 271 AVVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVR---RI- 326 + + + ++ + T ++ +I Sbjct: 500 QTSWRTEYRYRHSDGNNTWVLVQAIPEMDEQGKIVGYLGTLTDI--TERKNAEEATNKIN 557 Query: 327 -QRLAYVDP 334 Q A D Sbjct: 558 AQMQAIFDA 566 >UniRef50_B7V0E6 Motility regulator n=25 Tax=Pseudomonas RepID=B7V0E6_PSEA8 Length = 1415 Score = 706 bits (1823), Expect = 0.0, Method: Composition-based stats. Identities = 129/561 (22%), Positives = 232/561 (41%), Gaps = 31/561 (5%) Query: 201 SQLKQQVDAKVTKKEFALWLLALGALLLLLCMPLNEKSTIFSTNYTLSLLLPL--MMWGA 258 + ++++ T E + A+ + S T Y+ + +L + A Sbjct: 846 RRAERELRMAATVFEHST--AAIMVTDPAGYIVQVNDSFSRLTGYSPADVLDQQPRLLTA 903 Query: 259 MRYG-----YKLISLLWAVVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMA 313 R + L SL + I + +YP + + + SF+ + Sbjct: 904 DRQEANQLKHVLASLQHSGSWEGEILQKRKTGELYPSWVGITAVRDEEGDLVSFVCFFSD 963 Query: 314 VLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL--------RDAPWSALCYLRIPGME 365 + + ++A RRI RLAY D + HLPN L R+ W L +L + + Sbjct: 964 I--SERKASERRIHRLAYYDALTHLPNRTLFQDRLHTALQQAERNGQWVVLMFLDLDRFK 1021 Query: 366 MLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQE----RITAL 421 + + G + Q+++ LS + + V ++ G++ L L ++ +E R + Sbjct: 1022 PINDSLGHAAGDRMLQEVATRLSACVSQDDTVARMGGDEFTLLLPSQGDREIALKRAIQV 1081 Query: 422 DSHLK---QFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENM 478 + F +G + + LL+ +T + +N Sbjct: 1082 AELILGRLARPFTLEGREFFVTASIGVALSPQDGAELSLLMKNADTA--MYHAKEMGKNN 1139 Query: 479 QRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPIT--GMRGDVYHEILLRMKGEND 536 + + +++ + + L++ALE F L QP R E LLR + Sbjct: 1140 FQFYQAEMNARALERLELESDLRRALELGEFVLHYQPQFTGDGRRLTGAEALLRWQHPRR 1199 Query: 537 ELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENR-AKMPAHRFAINLSPTSVCQARF 595 L+ P F+PV E GL + + W++ + + AK+ + ++NLS + Sbjct: 1200 GLVPPSEFIPVLEEIGLVAQVGDWLLAEACKQLRSWHKAKVRVPKVSVNLSARQFADGQL 1259 Query: 596 PVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASY 655 ++ +L + I L E+TES +++V +A L L+ LG IA+DDFGTGY+S Sbjct: 1260 GERIAAILYETGIPPACLELELTESILMSDVAEAMQILSGLKRLGLAIAVDDFGTGYSSL 1319 Query: 656 ARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVL 715 LK D+LKID SF+ + D QI +I +A ++V+AE VE++ + + Sbjct: 1320 NYLKQFPIDVLKIDRSFVDGLPHGEQDAQIARAIIAMAHSLNLMVIAEGVESQAQLDFLR 1379 Query: 716 SLGIDYMQGYLIGKPQPLIDT 736 G D +QGYL G+P P Sbjct: 1380 EHGCDEVQGYLFGRPMPAEQF 1400 >UniRef50_Q2BHU8 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BHU8_9GAMM Length = 892 Score = 706 bits (1823), Expect = 0.0, Method: Composition-based stats. Identities = 114/528 (21%), Positives = 219/528 (41%), Gaps = 30/528 (5%) Query: 236 EKSTIFSTNYTLSLLLP--LMMWGAMRYGYKLISLLWAVV-----LMISIHSYQNYIPIY 288 + T Y + + ++ + + + + + IY Sbjct: 357 NNAFTRVTGYEAEEAIGNTPAFLQSGKHSEDFYQTMMESLSKNNYWQGEVWNQRKSGEIY 416 Query: 289 PGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL 348 P + T + +S+ + +++ + + T+++ I +LA+ D + LPN R+L L Sbjct: 417 PQHLTITAVQTSAGEITNYVGAFTDI--TQRKQDEADIHQLAFYDSLTGLPNRRSLQERL 474 Query: 349 -------RDAPWS-ALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQL 400 R A+ ++ + + L G + ++++ L+ + + V +L Sbjct: 475 DSALSSCRHTRQLGAVFFIDLDNFKNLNDTAGHDQGDKLLVEVANRLNSCVRNADMVARL 534 Query: 401 SGNDLALRLNTESHQE-----RITALDSHLK---QFRFFWDGMPMQPQIGVSYCYVRSPV 452 G++ + L E ++ + + + Q P + S Sbjct: 535 GGDEFIVILENLGVDESNVLAQVKDIVAKVILTIQAPLTIGTQAYHPTCSIGIALF-SEK 593 Query: 453 NHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLM 512 + ++ + + ++ +N R + L M L+ AL + L Sbjct: 594 DFSDEVMKRSDMA--MYQAKSSGKNTYRFFDPVAEEALCSLARMDADLRFALSNQQLELH 651 Query: 513 AQPITGMRGDVYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAEN 572 QP + + E LLR K + ++SP F+P+A + GL I WVI + + + Sbjct: 652 YQPQYRCQTLIGAEALLRWKHPDRGMVSPAEFIPLAEDTGLILPIGEWVIRQACKQLQQW 711 Query: 573 RAK--MPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQ 630 + + A+N+S CQ F V QLL Y + A +L E+TES L +V+ Sbjct: 712 QERPETAELFIAVNVSARQFCQDNFVESVRQLLNTYGVSAEKLKLELTESLVLMDVEDTI 771 Query: 631 ITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASIC 690 +Q L+ G + A+DDFGTGY+S + LK + D +KID SFIR++ + D +IV +I Sbjct: 772 QKMQALRSYGIRFALDDFGTGYSSLSHLKRLPLDQIKIDRSFIRDVPEDQDDSEIVQAII 831 Query: 691 HLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLN 738 + + + V+AE VE +E + L +QG+L+G+P + Sbjct: 832 AMGQNLGLNVLAEGVETDEQLAFLTELDCLDIQGFLLGRPSSIDKFET 879 >UniRef50_Q5P4Q9 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P4Q9_AZOSE Length = 813 Score = 706 bits (1822), Expect = 0.0, Method: Composition-based stats. Identities = 114/492 (23%), Positives = 197/492 (40%), Gaps = 19/492 (3%) Query: 271 AVVLMISIHSYQNYIPIYPGYTTQLTITS-SSYLVFSFIVNYMAVLATRQRAVVRRIQRL 329 + YP + + + FI + + T ++ IQ L Sbjct: 326 HGSWSGETTGVRCGGQRYPRTLMINGVRDPETREITHFIAIFSDI--TARKRAEADIQHL 383 Query: 330 AYVDPVVHLPNVRALNRAL--------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQ 381 AY D + L N +L L R+ A+ +L + + + + G + + + Sbjct: 384 AYHDTLTGLANRFSLTARLQLSVAEARRNGQRLAVMFLDLDRFKHINDSLGHPVGDELLK 443 Query: 382 KLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLK---QFRFFWDGMPMQ 438 +++ L + + V +L G++ + L +T + + L + D + Sbjct: 444 QVARRLRDAVRETDTVARLGGDEFVVVLQGIGGAHDVTHVAAKLLAQLSAPYCVDTTELH 503 Query: 439 PQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMN 498 + L+ +T + A + + R ++ + Sbjct: 504 TTASIGISLFPDDSADPAALMRNADTA--MYHAKAAGRAKFQFYTDEMNRAATARLDLER 561 Query: 499 RLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSS 556 +L+ A+ F L QP R E L+R + D LI+P F+P+A E G+ Sbjct: 562 KLRGAVARGEFELWYQPQFDSRHGHLTGLEALVRWRHPQDGLIAPLRFIPLAEETGVIVE 621 Query: 557 IDMWVIEHTLQFMAEN-RAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIF 615 I WV+ + + A +P R ++NLS + + V LA + L Sbjct: 622 IGTWVLREACRQARQWLDAGLPELRISVNLSVRQLREKCLVDTVWTTLAASGLRPGLLEL 681 Query: 616 EVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRN 675 E+TES + N +A LQ L+ LG +IAIDDFGTG++S + LK D LKID SFI + Sbjct: 682 EITESAVMDNPDEAVALLQALKNLGVRIAIDDFGTGHSSLSYLKLFPLDHLKIDRSFISD 741 Query: 676 IVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLID 735 I ++ D IVA+ LA + V+AE VE+ + LG D +QG+ +P Sbjct: 742 IEHDANDTMIVAAAVSLAHNLGLSVIAEGVESAVQVARLRELGCDELQGFHFSRPVTADV 801 Query: 736 TLNEIEPIRESA 747 N + + +A Sbjct: 802 VENLLRSVWRTA 813 >UniRef50_C7RVM5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RVM5_9PROT Length = 708 Score = 705 bits (1821), Expect = 0.0, Method: Composition-based stats. Identities = 126/536 (23%), Positives = 220/536 (41%), Gaps = 31/536 (5%) Query: 236 EKSTIFSTNYTLSLLLP--LMMWGAMRYGYKLISLLWAVV-----LMISIHSYQNYIPIY 288 +S T Y+ + + + + R+ +W + I + + IY Sbjct: 178 NQSFTRLTGYSAAEAIGRTPAVLKSGRHDDPFYQRMWNSLVEKGYWQGEIWNKRKSGQIY 237 Query: 289 PGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL 348 T I +S + ++ ++ + T + I RLAY D + LPN R L L Sbjct: 238 AELLTITAIVASGGITTHYVASFSDI--TEDKQAEAEIHRLAYYDALTRLPNRRLLQDRL 295 Query: 349 --------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQL 400 R + AL ++ + + L G + +++ L + G+ V +L Sbjct: 296 GQALAAAARHGLYGALFFIGLDNFKTLNDTRGHDVGDLLLVEVAQCLRAQVREGDTVARL 355 Query: 401 SGNDLALRLNTES-HQERITALDSHL-------KQFRFFWDGMPMQPQIGVSYCYVRSPV 452 G++ L L+ S + + A+ + F DG + ++ + + + Sbjct: 356 GGDEFVLLLDGVSGNADEAAAVAKEVGDKLREATSRPFSLDGQEYRCKLSIGVSLF-AAL 414 Query: 453 NHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLM 512 + + L + L NA + R +Q + + A+ + L QAL + L Sbjct: 415 DTVEELFKRADLA--LYQAKNAGRDRLRFFDPAMQAAMDLRGALESDLHQALALDQLRLH 472 Query: 513 AQPITGMRGDV-YHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAE 571 QP G V E LLR L+SP+ F+P+A GL I W++E + + Sbjct: 473 YQPQIDTAGRVIGVEALLRWWHPQRGLVSPNEFVPLAESTGLILPIGRWILETSCVLIKN 532 Query: 572 N--RAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQA 629 A + + A+N+S QA F +V + L +L E+TES L NV+ Sbjct: 533 WESDACTRSLQVAVNVSARQFRQADFVEQVKRSLKASGANPARLKLELTESVLLKNVEDT 592 Query: 630 QITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASI 689 + ++ LG ++DDFGTGY+S + L + D LKID SF+R + + I +I Sbjct: 593 IAKMLAIKRLGVAFSLDDFGTGYSSLSYLAQLPLDQLKIDQSFVRKLPGARKEETIARTI 652 Query: 690 CHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIRE 745 + R M V+AE VE+E R+ + + G QGYL +P P+ ++ Sbjct: 653 ITMGRELDMNVIAEGVESEAQRQFLEAHGCHAFQGYLFSRPLPVEHLTVFLQEADR 708 >UniRef50_B9LZ98 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. FRC-32 RepID=B9LZ98_GEOSF Length = 912 Score = 705 bits (1821), Expect = 0.0, Method: Composition-based stats. Identities = 110/479 (22%), Positives = 197/479 (41%), Gaps = 20/479 (4%) Query: 277 SIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVV 336 I P T V + + T ++ IQ+LAY D + Sbjct: 433 EIMLAHRNGSCVPVEVTTARTIWQGKQVE--LAIVRDI--TDRKKAEDEIQQLAYYDTLT 488 Query: 337 HLPNVRALNRAL--------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLS 388 LPN L L RD A+ +L + + + G + ++ L+ Sbjct: 489 GLPNRSLLQDRLGQGIVQAVRDNRKVAIMFLDLDRFKSINDTLGHVAGDSLLATVAERLT 548 Query: 389 PLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLKQF---RFFWDGMPMQPQIGVSY 445 + + V ++ G++ + ++ H E + + + + + + Sbjct: 549 ECVRETDTVARIGGDEFVIIISAIEHAEDLNKIAEKILAAISKPLVLNDQEIFITASIGI 608 Query: 446 CYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALE 505 + LL + + + +N + + + + + + + N L++ALE Sbjct: 609 AIYPEDGTDVQGLLKNADLA--MYKAKDQGKNAFQYFSREMNVQALEHLILENSLRRALE 666 Query: 506 HNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIE 563 N F + QP ++ V E L+R + + L+ P F+P+A E GL I W ++ Sbjct: 667 RNEFVIFYQPQMDLKSGRLVGMEALIRWQHPDLGLLPPSRFIPMAEETGLILPIGEWALQ 726 Query: 564 HTLQFMAEN-RAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNA 622 A R A+NL Q +F + +L K + QL E+TES Sbjct: 727 TACAKNRAWMDAGFMPLRVAVNLCGIQFRQKKFIELIEAVLKKTGLAPSQLELELTESML 786 Query: 623 LTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLD 682 ++ +++ L L+E+G +AIDDFGTGY+S + LKN + +KID SFIR++ +N D Sbjct: 787 MSKAEESTTVLHKLKEMGVSLAIDDFGTGYSSLSYLKNFPINRVKIDRSFIRDVPNNPDD 846 Query: 683 YQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIE 741 IV++I +A + V AE VEN E + + + +QGYL+ P P + + Sbjct: 847 TAIVSAIIAMAHNLNLKVTAEGVENHSQLEFLSTRNCNEIQGYLLSSPLPEAEFTRFLR 905 >UniRef50_A0L2H7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=12 Tax=Bacteria RepID=A0L2H7_SHESA Length = 1228 Score = 705 bits (1821), Expect = 0.0, Method: Composition-based stats. Identities = 115/533 (21%), Positives = 218/533 (40%), Gaps = 26/533 (4%) Query: 231 CMPLNEKSTIFSTNYTLSLLLPL--MMWGAMRYGYKLISLL-----WAVVLMISIHSYQN 283 + + T Y+ ++ A R + + + + Sbjct: 699 IIVDVNSAFTQITGYSRDEIIGKNCRFLEAERTDRSIDAQVRAALEQTGFWQGEVWDRHK 758 Query: 284 YIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRA 343 +P + + + + +I ++ + + ++ RI LA+ D + LPN + Sbjct: 759 EGFDFPKWLMMSIVRDETGAISHYIGSFTDI--SERKVNEERIHFLAHHDSLTLLPNRLS 816 Query: 344 LNRALR--------DAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGE 395 L L A+ ++ + + + G + +++ L ++ + Sbjct: 817 LQSRLEKVFQEAFISQTQIAVMFIDMDHFKNINDTLGHHVGDMLLLEVARRLKNIMGNDD 876 Query: 396 DVYQLSGNDLALRLNTESHQERITALDSHLKQ---FRFFWDGMPMQPQIGVSYCYVRSPV 452 V +L G++ + L+ H + + L+ + D P+ + + Sbjct: 877 IVARLGGDEFVVVLSDTDHDR-VAKVAEALRSGLNQTYLIDNKPLHSSPSIGISLFPTDG 935 Query: 453 NHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLM 512 + + L+ + + A N + + + ++ + L+QA+ N L Sbjct: 936 DSVEALMKNADMA--MYRAKAAGRNNYQFFTAAMNTLVTERQQIETGLRQAIACNELLLY 993 Query: 513 AQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMA 570 QP + V E L+R + L++PD F+P+A E + I WV+E+ L +A Sbjct: 994 YQPQVDISSGQVVGVEALIRWQHPELGLVAPDRFIPIAEEIDMIIPIGQWVLENALAQLA 1053 Query: 571 ENRA-KMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQA 629 E R R A+NLS + + ++ +L K+++ L E+TES A+ +Q Sbjct: 1054 EWRDKGAKGLRMAVNLSAHQLRKDTIVADIINVLTKHKLGKGALELEITESVAMQYPEQN 1113 Query: 630 QITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASI 689 L L++ G ++AIDDFGTGY+S + LK + D LK+D SF+++I S+ D I A+ Sbjct: 1114 AKLLAELRQHGIELAIDDFGTGYSSLSYLKLLPLDRLKLDRSFVKDIESDPNDAAISAAT 1173 Query: 690 CHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEP 742 +A + VVAE VENE + +G D +QGY KP D IE Sbjct: 1174 ISMAHELGLTVVAEGVENEAQLVLLSGMGCDLVQGYYFSKPLAADDCFRFIER 1226 >UniRef50_C6BWZ0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BWZ0_DESAD Length = 716 Score = 704 bits (1819), Expect = 0.0, Method: Composition-based stats. Identities = 117/532 (21%), Positives = 215/532 (40%), Gaps = 25/532 (4%) Query: 232 MPLNEKSTIFSTNYTLSLLLPL--MMWGAMRYGYKLISLLW-----AVVLMISIHSYQNY 284 + + T Y+ ++ + + R+ +W + I + + Sbjct: 183 IRYINDAFTHITGYSEEEVIGQNPSILKSNRHKPSFYKGVWKSIKTNGMWEGEIWNRRKN 242 Query: 285 IPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRAL 344 ++P + + IT V ++I + + + +A R+IQ AY D + LPN L Sbjct: 243 GEVFPEWISIKAITDVKGEVVNYIAVFRDI--SEAKASQRKIQHQAYHDALTGLPNRTLL 300 Query: 345 NRALRDA--------PWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGED 396 +R A AL ++ + + + + G ++ Q+ + + ++ + Sbjct: 301 IDRIRKAIASSNDRKSCIALLFIDLDNFKNINDSLGYVIGDSVLQQAAARIREFIDEKDT 360 Query: 397 VYQLSGNDLALRLNTESHQERITALDSHLKQF---RFFWDGMPMQPQIGVSYCYVRSPVN 453 V ++ G++ + L + + + + + Sbjct: 361 VSRIGGDEFVIMLKDLQDKHDAAVMADTIINLFAQALTVESHQFTITPSIGIALYPEDGK 420 Query: 454 HIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMA 513 Y L+ +T ++ N L +++M N+L+Q N F + Sbjct: 421 TPYSLVRNADTA--MNKAKQEGRNRYHLFTPGLTESALRRISMENQLRQTASDNGFTVYY 478 Query: 514 QPITGMR--GDVYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAE 571 QP + V E L+R + +ISP F+P+A E GL I V+E E Sbjct: 479 QPKVNLHDNTIVGMEALIRWIQPDGTIISPAEFIPLAEETGLIVPIGEQVLEAACLDTVE 538 Query: 572 -NRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQ 630 N+ + ++NLS Q + + ++A I L E+TES + +++Q + Sbjct: 539 LNQRFGTNLKVSVNLSLRQFKQEQLMKNIMDIIAMTAICPSCLELEITESTVMDDIEQTK 598 Query: 631 ITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASIC 690 L+ + +LG ++IDDFGTGY+S + LKN+ LKID SF+ + N D ++V +I Sbjct: 599 TILEKMDKLGITLSIDDFGTGYSSLSHLKNMPMHTLKIDQSFVAGLPHNKSDQKLVKAIM 658 Query: 691 HLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEP 742 LAR + VAE +E E + LG + MQGY P PL + IE Sbjct: 659 SLARSFDLSTVAEGIETPEQYNYMRELGCEVMQGYYYSPPVPLEEFAALIEA 710 >UniRef50_C6X9G9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X9G9_METSD Length = 984 Score = 703 bits (1815), Expect = 0.0, Method: Composition-based stats. Identities = 109/536 (20%), Positives = 215/536 (40%), Gaps = 25/536 (4%) Query: 230 LCMPLNEKSTIFSTNYTLSLLLP--LMMWGAMRYGYKLISLLWAVV-----LMISIHSYQ 282 L + T YT +L + A + +W + + + Sbjct: 448 LRTIAINQGFTDITGYTEDDVLGNIPNVLEADLKKPEPHREIWKALTREGRWRGEFWNQR 507 Query: 283 NYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVR 342 Y + T + + V +++ + + + + R+ L DP+ LPN R Sbjct: 508 KNNEQYAEWVTLTAVNNEEGKVINYVGVFADI--SEIKHSQSRLNELVNRDPLTGLPNRR 565 Query: 343 ALNR--------ALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPG 394 ++ A R+ AL ++ + + + G + + ++S + + Sbjct: 566 LMHELLDHAIKYAEREQNEIALLFVDLDRFKAINDTLGHQMGDKLLFEVSQRIRAAVRDS 625 Query: 395 EDVYQLSGNDLALRLNTESHQERITALDSHL---KQFRFFWDGMPMQPQIGVSYCYVRSP 451 + V +L G++ + ++ +E + + Q F DG + V Sbjct: 626 DAVARLGGDEFIVMMDVLREREDAAKVAKKIISSLQNEFLIDGRELFISASVGISVYPDD 685 Query: 452 VNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFL 511 + L+ + + V N +N + L + ++ + N+L++AL + F + Sbjct: 686 SLDVDGLIKAADIA--MYQVKNKGKNNHCFYSADLSQNAVERFTLENQLRRALARDQFEV 743 Query: 512 MAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFM 569 Q + + E L+R ++SP F+P+A E GL I WV+ + + Sbjct: 744 YYQAQVSLETGRIIGAESLIRWIHPELGVVSPAKFIPLAEETGLIIPIGEWVLRQSAMQV 803 Query: 570 AENRAKMPAHR-FAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQ 628 E + ++N+S + ++ F V +L + E+ L E+TES + N + Sbjct: 804 KEWHDQGFDIDWVSVNVSGVQIQRSNFADTVYGILVETDCESHLLELEITESTVMHNTEY 863 Query: 629 AQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVAS 688 ++ LG ++AIDDFGTGY+S + LK + D +KID SF+R++ +NS D I + Sbjct: 864 VIDVFDRIKHLGVRLAIDDFGTGYSSLSHLKRLPLDKIKIDQSFVRDLPNNSDDAAIATA 923 Query: 689 ICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIR 744 I +A+ V+AE VE + + +G QGYL +P + + + Sbjct: 924 INAMAQSLGFTVIAEGVETRQQASFLKKIGCQQGQGYLYSRPVTASEFTALLRAEQ 979 >UniRef50_C4L9X9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L9X9_TOLAT Length = 1101 Score = 702 bits (1814), Expect = 0.0, Method: Composition-based stats. Identities = 126/591 (21%), Positives = 236/591 (39%), Gaps = 34/591 (5%) Query: 187 IRVVRNPFYLRSYYSQLKQQVDAKVTKKEFALWLLALGALLLLLCMPLNEKSTIFSTNYT 246 R VR ++ + + + ++ + + M ++ + I N Sbjct: 513 TRCVRTADRNIAFIISVIEDISSQKENEAILRQSATVFDNTREGIMITDKNAQIIRVNPA 572 Query: 247 LSLLLPL----------MMWGAMRYGYKLISLLWAVV-----LMISIHSYQNYIPIYPGY 291 + L +++ + ++ ++ + + I + + I P Sbjct: 573 FAELFGFSQHELQGKTPVIFKSGKHTHEFYQHIRDSLNTSAFWRGEIWNRRKDNHIIPLI 632 Query: 292 TTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALN------ 345 + + + + ++ Y + ++ +A ++ LA+ DP+ LPN L Sbjct: 633 CSISAVRNDKQQLTHYVSVYSDI--SKLKASEAKLAHLAHHDPLTQLPNRTLLTINLSHA 690 Query: 346 --RALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGN 403 A+R+ AL L + + + ++G + Q+++ L + + + +L G+ Sbjct: 691 IDLAVRNHHRIALLMLDLDRFKDVNDSFGHQIGDALLQEVARRLRRRVRISDTICRLGGD 750 Query: 404 DLALRLNTESHQERITALDSHLKQF---RFFW-DGMPMQPQIGVSYCYVRSPVNHIYLLL 459 + + + + + Q F +G + + LL Sbjct: 751 EFTVLIEGNPALHDVEHFAEDILQLLKDPFSLPNGREVIIGASIGISLYPEHGQTPKELL 810 Query: 460 GELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGM 519 + + A + + R + L R + ++ + RLQ+AL N L QP + Sbjct: 811 QQAD--AAMYRAKAHGRSCFRYFSDELTRAAEQRLDLEVRLQRALRLNELCLYFQPQIDI 868 Query: 520 RGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRA-KM 576 + + E L+R + LISP F+PVA E GL + WV+ + E + + Sbjct: 869 SSNRIIGAEALVRWQDPAHGLISPAQFIPVAEETGLIKQLGEWVLLEACRQGKEWQQKGL 928 Query: 577 PAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHL 636 PA A+N+SP + V L + A L E+TES +T+ +A L L Sbjct: 929 PAINLAVNISPVQFRNSNILESVFNALKQTGYPASLLELELTESALMTHENEAVEILSAL 988 Query: 637 QELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMK 696 ++ G ++AIDDFGTGY+S A LK D+LKID SF+ +I D +I A+I +A Sbjct: 989 RKYGIRLAIDDFGTGYSSLAYLKRFPLDVLKIDKSFVDDIPHKKDDMEIAAAIVAMAHTL 1048 Query: 697 KMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIRESA 747 ++ V+AE VE EE + G D QGYL+ P P + E + Sbjct: 1049 RLKVLAEGVETEEQLTFLKEQGCDCYQGYLMSPPVPADQFEQLLRAQAEDS 1099 >UniRef50_B3PHI4 Sensory box/GGDEF family protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PHI4_CELJU Length = 595 Score = 702 bits (1814), Expect = 0.0, Method: Composition-based stats. Identities = 100/472 (21%), Positives = 185/472 (39%), Gaps = 18/472 (3%) Query: 282 QNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNV 341 + I T++ + + + + + T ++ +IQ LA D + LPN Sbjct: 108 RQSGRIRWLLTSKFPVFNDTGKTIGLVGIGRDI--TERKQSEEQIQYLATHDSLTALPNR 165 Query: 342 --------RALNRALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEP 393 A+ A R A+ ++ + + + G Q +++ L Sbjct: 166 FMFSKLLAVAIESARRHQRQLAVLFIDLDRFKNINDTLGHDAGDQLLITMANRFRTCLRT 225 Query: 394 GEDVYQLSGNDLALRLNTESHQERITALDSHLKQF---RFFWDGMPMQPQIGVSYCYVRS 450 + V +L G++ + L ++ + + G + + C Sbjct: 226 SDIVGRLGGDEFVILLPELESHDQAARVAQKILSAAIQPLDVHGQECRVTASIGICLYPE 285 Query: 451 PVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFF 510 L+ + + +N + + L+ +++ + N L++ALE + FF Sbjct: 286 DAEDEQALMKNADIA--MYRAKEEGKNNYQFYSPDLKVRSLERLMLENNLRKALERHEFF 343 Query: 511 LMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQF 568 L Q ++ E L+R + ISP F+P+A E GL + WV+ Sbjct: 344 LHYQAKRNLKTGKIAGVEALVRWQHPELGTISPAHFIPLAEETGLIVHLGRWVLRAACTQ 403 Query: 569 MAENRA-KMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVK 627 + +P A+NLS +++ L + + L E+TE + + + Sbjct: 404 GVIWQQQGLPPICIAVNLSARQFFDDNLINDIANALRESGLAPELLEMEITEGMIMQDAE 463 Query: 628 QAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVA 687 +A L ++ LG ++AIDDFG GY+S A +K D LK+D SFIR+I +N D I Sbjct: 464 RAIRILTGIKALGVRLAIDDFGVGYSSLAHIKRFPIDTLKVDSSFIRDIPANREDRAITE 523 Query: 688 SICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNE 739 +I + + + V+AE VE +E + D QGY KP + Sbjct: 524 AIIAMGKTLSLTVIAEGVETQEQENFLRDSACDQTQGYYFSKPVSPEEFTRF 575 >UniRef50_Q2BQI6 Putative uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQI6_9GAMM Length = 955 Score = 701 bits (1811), Expect = 0.0, Method: Composition-based stats. Identities = 108/506 (21%), Positives = 200/506 (39%), Gaps = 24/506 (4%) Query: 254 MMWGAMRYGYKLISLLWAVV-----LMISIHSYQNYIPIYPGYTTQLTITSSSYL-VFSF 307 + + ++ +W + + + IYP T I + Sbjct: 447 RILQSGKHDIAFYENMWEQIQKHGHWRGEVWNRAKSGTIYPEILTISAIDFKKGQQPSGY 506 Query: 308 IVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL--------RDAPWSALCYL 359 + + + T + R+ LA+ D + LPN L R A+ +L Sbjct: 507 VGVFADI--TSLKETEARLDHLAHYDALTELPNRLLFRERLIHSLLMSERKKTKVAVLFL 564 Query: 360 RIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERIT 419 + + + G + +++ L ++ G+ V ++SG++ L L + Sbjct: 565 DLDRFKNINDTLGHGVGDILLAEIASRLRHVVRMGDTVGRISGDEFCLILEDIQDVTDVV 624 Query: 420 ALDSHLKQF---RFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPE 476 + + + +Q + N LL ++ + A Sbjct: 625 PIVEKILSVFSQTIQINSHMLQISASIGVAISPDNSNDADALLSFSDSA--MYEAKEAGR 682 Query: 477 NMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMR--GDVYHEILLRMKGE 534 N + + ++ + + + L+ ALE + FF+ QP ++ V E L+R + Sbjct: 683 NTYKFYTAEMTQQALEHSFVQSALRDALEQSQFFVTYQPQLRIKDYSMVGVEALVRWQHP 742 Query: 535 NDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAEN-RAKMPAHRFAINLSPTSVCQA 593 LI PDSF+P+A GL + W++ + + ++ R +N+S T + Sbjct: 743 ERGLIPPDSFIPIAENSGLIRELGAWILRTACEQGVQWLNEQVNFGRIYVNVSATQLHDE 802 Query: 594 RFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYA 653 F V L + A +L EVTES + + + A L +E+G ++AIDDFGTGY+ Sbjct: 803 SFTEAVIMCLKETGFPAEKLGLEVTESFIMKDPQHAINVLSSFKEIGIELAIDDFGTGYS 862 Query: 654 SYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREA 713 S + LK + D LKID SFIR+I + D I ++ + + + V+AE VE++ + Sbjct: 863 SLSYLKQLPIDKLKIDQSFIRDIPDDPNDMAIAEAVIAMGKALNLEVIAEGVESQIQADF 922 Query: 714 VLSLGIDYMQGYLIGKPQPLIDTLNE 739 +L +QGYL P Sbjct: 923 LLDKECTEVQGYLYAHPLTADAFSEW 948 >UniRef50_Q1H367 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H367_METFK Length = 1070 Score = 700 bits (1808), Expect = 0.0, Method: Composition-based stats. Identities = 106/485 (21%), Positives = 198/485 (40%), Gaps = 18/485 (3%) Query: 271 AVVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLA 330 M + + + YP + + T+ + + +++V + ++++ R+Q LA Sbjct: 563 HGKWMGELLAQKRSGEYYPAWVSISTVHDNHGSLQNYVVVLTDI--SQRKQAEERLQFLA 620 Query: 331 YVDPVVHLPNVRALNRA--------LRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQK 382 D + LPN L R + ++ + +++ G Q+ Sbjct: 621 THDGLTGLPNRTLLQERMELAVLRAQRYQQCVGVLFIDLDRFKIINDTLGHQAGDVLLQE 680 Query: 383 LSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHL---KQFRFFWDGMPMQP 439 ++ L L + + + G++ + + Q+ + + + F + Sbjct: 681 VAGRLGECLRQTDTIARQGGDEFVVLVEDFIEQQYLVNVARKIMHALAQPFILMQQELYI 740 Query: 440 QIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNR 499 + I LL + + + +N + ++ + N Sbjct: 741 SASIGISVYPDDGVDISSLLKNADMA--MYRAKDDGKNTFHFYSADGNANSVSRLTLENS 798 Query: 500 LQQALEHNHFFLMAQPITGM--RGDVYHEILLRMKGENDELISPDSFLPVAHEFGLSSSI 557 L++ALE N F L+ Q + + + E L+R ++SP F+PVA E G+ I Sbjct: 799 LRRALERNEFSLLYQAKLDLAEQNIIGAEALIRWHSAELGMVSPQDFIPVAEETGMIIEI 858 Query: 558 DMWVIEHTLQFMAENRA-KMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFE 616 WV++ + + R +N+S + +S L + + L E Sbjct: 859 GEWVLQQACRDACHWQEVAGRPIRVGVNISARQFREDSLYQAISNALEESGLTPNCLELE 918 Query: 617 VTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNI 676 +TES + N ++A LQH + LG + IDDFGTGY+S LK+ D LKID SF+R+I Sbjct: 919 ITESMIMQNAERASQMLQHFRNLGSYVLIDDFGTGYSSLGYLKHFPIDSLKIDRSFVRDI 978 Query: 677 VSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDT 736 +S D I +I +A K+ VVAE VE + E + G D +QGY+ +P + D Sbjct: 979 PQDSDDMAITQAIIAMAHSLKINVVAEGVETQAQLEFLRGQGCDQLQGYIFSRPLVVEDF 1038 Query: 737 LNEIE 741 + + Sbjct: 1039 VGLLR 1043 >UniRef50_Q2YCL1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=2 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2YCL1_NITMU Length = 1054 Score = 700 bits (1807), Expect = 0.0, Method: Composition-based stats. Identities = 108/506 (21%), Positives = 202/506 (39%), Gaps = 23/506 (4%) Query: 261 YGYKLISLLWAVVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQR 320 + +LL + + + + + + + + T+++ Sbjct: 552 FDEANRALLSSGEWRGELAQRRRDQSMLNVEAHWTLVRNDDGEPQAIFAINTDI--TQRK 609 Query: 321 AVVRRIQRLAYVDPVVHLPNVRALNRAL--------RDAPWSALCYLRIPGMEMLVKNYG 372 + I LA D + LPN R L L R+ AL ++ + ++L G Sbjct: 610 SAENEILHLALYDSLTGLPNRRLLLDRLGHALAVSARNQRMGALLFIDLDNFKLLNDTLG 669 Query: 373 IMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRL------NTESHQERITALDSHLK 426 + ++++ LS + + V +L G++ + L + + +I+ + ++ Sbjct: 670 HDMGDLLLRQVAPRLSSCVRESDTVARLGGDEFVVILMGDFGEDHDEALTQISTICERIR 729 Query: 427 QF---RFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGA 483 F D + LL + + + N R Sbjct: 730 SAFIQPFNLDPYIHHITPSIGIALFNDQSQTTNELLKRADLA--MYQAKASGRNAMRFFD 787 Query: 484 MYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDVYHEILLRMKGENDELISPDS 543 +Q + + + + L ++ E N F L Q RG + E L+R + L+ P Sbjct: 788 PDMQAAMNARAILESELYKSWERNEFILHYQLQVDSRGIIGAEALVRWQHPRRGLLPPSE 847 Query: 544 FLPVAHEFGLSSSIDMWVIEHTLQFMAEN--RAKMPAHRFAINLSPTSVCQARFPVEVSQ 601 F+P A E GL + WV+E +A + + ++N+S CQ F +V Sbjct: 848 FIPQAEETGLILPLGEWVLETACNQLASWALQPETVQLNLSVNVSSLQFCQPDFVEQVIS 907 Query: 602 LLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNV 661 +L + +L E+TES + ++ + L+ G A+DDFG GY+S LK + Sbjct: 908 ILDRTGANPQRLKLELTESILVHDMDDTIAKMMTLKARGVGFALDDFGIGYSSLYYLKRL 967 Query: 662 NADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDY 721 D +KID SF+R++++++ D IV +I LA+ + V+AE VE ++ + S G Sbjct: 968 PLDWVKIDRSFVRDVLTDNNDATIVRTILLLAKSMGLAVIAEGVETGAQKDFLASHGCTA 1027 Query: 722 MQGYLIGKPQPLIDTLNEIEPIRESA 747 QGYL +P PL ++P A Sbjct: 1028 YQGYLFSRPLPLEQFERFVQPAAGGA 1053 >UniRef50_Q1GXZ6 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC and GAF sensor(S) n=2 Tax=Proteobacteria RepID=Q1GXZ6_METFK Length = 1238 Score = 700 bits (1807), Expect = 0.0, Method: Composition-based stats. Identities = 117/488 (23%), Positives = 201/488 (41%), Gaps = 24/488 (4%) Query: 273 VLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYV 332 + + +Y+ L I +S+ + ++ + T ++A RIQ LA+ Sbjct: 750 SVRTELVNYRKNGEEIWLEMDILPIANSAGVFTHWVSVQRDI--TERKAAESRIQHLAFY 807 Query: 333 DPVVHLPNVRALNRALRDA--------PWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLS 384 D + +LPN L L A AL +L + + L +G ++++ Sbjct: 808 DMLTNLPNRLLLLDRLEQALLNSMRLKRSGALLFLDLDNFKTLNDTHGHDFGDMLLEQVA 867 Query: 385 HWLSPLLEPGEDVYQLSGNDLALRLNTESHQ-----ERITALDSHLK---QFRFFWDGMP 436 L + + V +L G++ + + S Q + + + + F G Sbjct: 868 QRLLNSVRITDTVARLGGDEFVVVVENLSEQGCNAAQEASLVADKILLALSQPFRLSGYE 927 Query: 437 MQPQIGVSYCYV-RSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVA 495 + + LL + + A N R +Q + + A Sbjct: 928 HYSSCSIGVALFCNEQQVTVDELLKRADLA--MYEAKAAGRNTFRFFDPAMQALITKRAA 985 Query: 496 MMNRLQQALEHNHFFLMAQPITGMRGDV-YHEILLRMKGENDELISPDSFLPVAHEFGLS 554 M L+QAL + L QP +G + E L+R + L+SP +F+ +A E GL Sbjct: 986 MEEDLRQALRRDEMRLYYQPQVDSQGSLLGAEALVRWEHPQQGLLSPAAFIELAEETGLI 1045 Query: 555 SSIDMWVIEHTLQFMAEN--RAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQ 612 I WV+ + R + ++N+S + Q F V +L + Sbjct: 1046 LPIGEWVLRTACMQLVAWAGRPETAGLVLSVNVSARQLHQHDFIDRVFSILKETGANPQS 1105 Query: 613 LIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSF 672 L E+TES + N+++ + L+ +G ++DDFGTGY+S A LK + LKID SF Sbjct: 1106 LKLELTESTLVENIEEMITKMNILKAMGVGFSMDDFGTGYSSLAYLKRLPLSQLKIDRSF 1165 Query: 673 IRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQP 732 +R+++ +S D IV +I L + VVAE VE+ E ++ + G QGYL G+PQP Sbjct: 1166 VRDVLVDSNDASIVQTIIALGHGLGIEVVAEGVESWEQQQFLEKHGCLEYQGYLFGRPQP 1225 Query: 733 LIDTLNEI 740 E Sbjct: 1226 AEQLEREF 1233 >UniRef50_Q88QU8 Sensory box protein n=22 Tax=Gammaproteobacteria RepID=Q88QU8_PSEPK Length = 1247 Score = 699 bits (1806), Expect = 0.0, Method: Composition-based stats. Identities = 107/530 (20%), Positives = 215/530 (40%), Gaps = 25/530 (4%) Query: 232 MPLNEKSTIFSTNYTLSLLLPL--MMWGAMRYGYKLISLLWAVV-----LMISIHSYQNY 284 + ++ T Y+ L + + ++ +W + I++ + Sbjct: 704 ISAVNRAFSEITGYSEIEALGQTPRLLASGQHDSAFYLAMWHQLTAEGHWQGEIYNKRKN 763 Query: 285 IPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRAL 344 +YP + T + +S + F+ + + + + ++ A+ DP+ LPN Sbjct: 764 GELYPSWLTISAVRNSDREITHFVAVFADI--SSIKHAQAKLDYQAHHDPLTGLPNRTLF 821 Query: 345 NRALR--------DAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGED 396 L+ A+ +L + + + + G + + ++ L + + Sbjct: 822 ENRLQGVLTCAQVSNRQGAVLFLDLDRFKHINDSLGHPVGDLLLKGIAQRLKEQVRDVDT 881 Query: 397 VYQLSGNDLALRLNTESHQERITALDSHLKQF---RFFWDGMPMQPQIGVSYCYVRSPVN 453 V +L G++ + L + + + L F + Sbjct: 882 VARLGGDEFIILLPGLHKPSDASTIANKLLACFNAPFQAGEHEFFTSASIGISLYPQDGT 941 Query: 454 HIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMA 513 + L+ + A + N L + +++A+ + L++A+E N L Sbjct: 942 DVSTLIRNAD--AAMYRSKAKGRNRVEAYTRDLTAQASERIALEHELRRAVERNEMSLCF 999 Query: 514 QPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAE 571 QP ++ V E L+R + P+ F+ +A E G + WV+E + M Sbjct: 1000 QPKLSLKTQSLVGAEALIRWSHPTFGEVPPEHFIHLAEENGTILQLGDWVLEQACRQMQA 1059 Query: 572 NRAKMPAH-RFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQ 630 + +INL+ + + QLL +Q++A L E+TE+ ++ ++A Sbjct: 1060 WKQHYQPFGPLSINLAGAQLRHPHLARRIEQLLKHHQLKAGDLQLEITENFIMSQAEEAL 1119 Query: 631 ITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASIC 690 L L++LG Q+AIDDFGTGY+S + LK + D+LKID SFIR + + D I +I Sbjct: 1120 AVLYQLKKLGVQLAIDDFGTGYSSLSYLKRLPLDILKIDKSFIRGLPDDPHDAAIARAII 1179 Query: 691 HLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEI 740 L R ++ ++AE VEN+ + + + G + +QGY++ P P + Sbjct: 1180 ALGRSMQLTIIAEGVENQAQQRFLAAEGCEQIQGYIVSLPLPPEEFAAAF 1229 >UniRef50_B2JCW5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=7 Tax=Bacteria RepID=B2JCW5_BURP8 Length = 1040 Score = 699 bits (1806), Expect = 0.0, Method: Composition-based stats. Identities = 111/537 (20%), Positives = 204/537 (37%), Gaps = 25/537 (4%) Query: 231 CMPLNEKSTIFSTNYTLSLLLPL--MMWGAMRYGYKLISLLWAVV-----LMISIHSYQN 283 + + T Y ++ + + I+ + + + + +Y+ Sbjct: 500 LIEYVNPAFKRITGYDPQEVIGQDCRLLQRDDRDQEGIAAIRQALAANREVSAVLRNYRK 559 Query: 284 YIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRA 343 ++ + + I V T +++ A D + LPN Sbjct: 560 DGALFWNQLYIAPVPDADGQTTHHIAVINDV--TALIRYQEQLEYQANYDSLTRLPNRNL 617 Query: 344 LNRAL--------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGE 395 L L R A+ ++ + G + + + G + + ++ L+ + Sbjct: 618 LRDRLQHALIVAQRHHKGVAVVFIDLDGFKNVNDSLGHSVGDRLLSVVADRLARCARASD 677 Query: 396 DVYQLSGNDLALRLNTESHQERITALDSHLK---QFRFFWDGMPMQPQIGVSYCYVRSPV 452 V + G++ + + ++ + A ++ + DG + + Sbjct: 678 TVARHGGDEFVIVMTDTVDEQSLIAWMERVRASISEPVWLDGTELYVGCSMGASLFPQDG 737 Query: 453 NHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLM 512 + L+ + + + + N + + ++ + RL++AL N F L Sbjct: 738 DDAETLMKKADLA--MYRAKDMGRNTFQFYQPEMNVSAGARLNLERRLRRALRDNEFLLH 795 Query: 513 AQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMA 570 QP + V E L+R LI P F+PVA E GL + WV+ + Sbjct: 796 YQPQVDIETGQVVGMEALVRWHDPEVGLIPPSQFIPVAEESGLIGPLSEWVLREACRQNK 855 Query: 571 ENRA-KMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQA 629 + +P R ++NLS Q V Q+L + ++ L E+TES + N ++A Sbjct: 856 AWQDEGLPPARVSVNLSARQFQQRDIAKLVMQVLEETGLDPQYLELELTESTIMRNAEEA 915 Query: 630 QITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASI 689 L L LG +AIDDFGTGY+S + LK D LKID SF+ +I +S D I ++I Sbjct: 916 VSMLNELHALGIGLAIDDFGTGYSSLSYLKRFPVDRLKIDRSFVSDIGESSDDETITSAI 975 Query: 690 CHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIRES 746 LA + V+AE VE + + D MQGY KP P ++ +S Sbjct: 976 IALAHSLNLQVIAEGVETSTQLDFLKERACDEMQGYFFAKPLPHHAIPGMLQRGSQS 1032 >UniRef50_A0LD38 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LD38_MAGSM Length = 834 Score = 699 bits (1805), Expect = 0.0, Method: Composition-based stats. Identities = 125/528 (23%), Positives = 218/528 (41%), Gaps = 26/528 (4%) Query: 236 EKSTIFSTNYTLSLLLP--LMMWGAMRYGYKLISLLW-----AVVLMISIHSYQNYIPIY 288 + + T Y ++ + R+ ++ + +W I ++ IY Sbjct: 285 NPAFVRITGYPADEVIGRDPGFMKSHRHTHEFYAEMWKKIWQTGQWQGEIWDRRHNGEIY 344 Query: 289 PGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL 348 P + T + + + I + + +R +A R+++LA+ D + LPN L Sbjct: 345 PKWLTINAVYDERGHLVNCIGIFSDI--SRLKATEERLEQLAFFDCLTKLPNRAHFQSRL 402 Query: 349 --------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQL 400 R L ++ + + + + G Q + + + + + V ++ Sbjct: 403 DHALTAANRRQNKVGLIFIDLDHFKHINDSMGHNAGDQLLIEAAKRIQSCVREEDTVARM 462 Query: 401 SGNDLALRLNTESHQERI--TALDSHLKQF--RFFWDGMPMQPQIGVSYCYVRSPVNHIY 456 G++ + L + ++ + L+ F + + + + Sbjct: 463 GGDEFTIILADLTDTAKVMTNVALTILESFTHPIVLEDKKLFIGCSLGMAIYPDDSGNAA 522 Query: 457 LLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPI 516 LL+ +T + + N + + + ++++ + L+ A++H F L QP Sbjct: 523 LLIKHADTA--MYRAKESGRNRYSFYTAEMNAQAQSRISLESELRYAIDHKAFELYYQPK 580 Query: 517 TGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAE-NR 573 V E LLR + +ISP+ F+P+A E GL ++I V+E Q + NR Sbjct: 581 VDAHSSEIVGFEALLRWIHPTEGVISPNQFIPIAEESGLIAAIGNQVVEMACQGLQRINR 640 Query: 574 AKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITL 633 AINLS + Q SQ LA Y IEA QL EVTES ++++ L Sbjct: 641 CTPKPLPVAINLSVRQLRQDNLVNYFSQTLANYGIEAEQLELEVTESFLAKPIEKSAALL 700 Query: 634 QHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLA 693 Q L +LG +IAIDDFGTGY+S + LKN LKID SF+ + N IV +I +A Sbjct: 701 QALHQLGYKIAIDDFGTGYSSLSYLKNFPIHTLKIDRSFVMEVAHNQESRTIVQAIISMA 760 Query: 694 RMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIE 741 +VAE VE + LG MQG+ +P PL + L + Sbjct: 761 HALGYDLVAEGVETAAQVNVLQGLGCGIMQGFHYARPAPLHEILEILS 808 >UniRef50_B3PCE8 Sensory box/GGDEF family protein n=2 Tax=Gammaproteobacteria RepID=B3PCE8_CELJU Length = 772 Score = 698 bits (1803), Expect = 0.0, Method: Composition-based stats. Identities = 110/502 (21%), Positives = 192/502 (38%), Gaps = 34/502 (6%) Query: 267 SLLW---------AVVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLAT 317 +W + + ++ + + VF + + Sbjct: 251 QSMWDIDIATKTNQQTYEVELDLMHKDGSLHTYLMVKFPLRGKEGKVFGVCTIGTDI--S 308 Query: 318 RQRAVVR-------RIQRLAYVDPVVHLPNVRALNRA--------LRDAPWSALCYLRIP 362 ++ R+ +A+ D + LPN R AL L I Sbjct: 309 ERKLAENALREQQSRLNYMAFHDALTSLPNRSLFYDRIYHGLARARRSNSRVALMLLDID 368 Query: 363 GMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALD 422 +++ + G + ++ L+ + + V +L G++ + L + + + Sbjct: 369 RFKIVNDSLGHDAGDILLKAIAMRLTEGVRDMDTVARLGGDEFVVVLEGIHDVDDVIFVA 428 Query: 423 SHLK---QFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQ 479 + L G + + + LL + + A +N Sbjct: 429 NKLLATLSRPLDISGHSISATVSIGVSIFPEDGADTDELLKNADIA--MYKAKEAGKNNC 486 Query: 480 RRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDE 537 + + + + + N L++A+E N L QP ++ E L+R + Sbjct: 487 QFYTKGMNATAVNYLLLENDLRRAIEQNQLALYYQPQIDLKTGDMTGVEALVRWQHPERG 546 Query: 538 LISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAH-RFAINLSPTSVCQARFP 596 L+SP F+P+A E GL I WV+ + + A+NLSP Q FP Sbjct: 547 LVSPAHFIPLAEETGLIVPIGEWVLREACKQKKIWLDTGKNVGKVAVNLSPRQFRQKNFP 606 Query: 597 VEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYA 656 +V +L + +EA L E+TES A+ + + L L ++G +AIDDFGTGY+S A Sbjct: 607 GKVEAILQETGLEAKYLELEITESCAMEHAGETINQLNQLNQMGTFLAIDDFGTGYSSLA 666 Query: 657 RLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLS 716 L+ LKID SFI +I ++ D I +I LA ++ VVAE VE E E + + Sbjct: 667 YLQRFPIQKLKIDRSFIHDIHDDANDAAIAKTIIGLAHNMQLRVVAEGVETESQAEWLRA 726 Query: 717 LGIDYMQGYLIGKPQPLIDTLN 738 G D +QG+L KP + Sbjct: 727 KGCDQVQGFLYAKPMTAKQLES 748 >UniRef50_A6WKV6 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=6 Tax=Shewanella RepID=A6WKV6_SHEB8 Length = 921 Score = 698 bits (1802), Expect = 0.0, Method: Composition-based stats. Identities = 127/532 (23%), Positives = 223/532 (41%), Gaps = 26/532 (4%) Query: 232 MPLNEKSTIFSTNYTLSLLLPL--MMWGAMRYGYKLISLLWAVV-----LMISIHSYQNY 284 + + T Y LL ++ + R+ LW + I + + Sbjct: 394 ITDVNGAFFEITGYVREELLGQNPRIFSSGRHDKAFFDKLWNALLANGKWNGEIWNRRKN 453 Query: 285 IPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRAL 344 I+P T TI V F+ + + + Q+ ++ LAY DP+ HLPN Sbjct: 454 GTIFPQNITISTIYDEVGDVRYFVAVFADI--SAQKENEAQLTHLAYFDPLTHLPNRMKF 511 Query: 345 N--------RALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGED 396 +A R A + + + + ++G + + +L+ L + + Sbjct: 512 MMQLKQEVRQAKRLNLQLATVMIDVDLFKHINDSFGHSIGDEMLVELAKRLRSQVGDQDV 571 Query: 397 VYQLSGNDLALRLNTESHQERITALDSHLKQF---RFFWD-GMPMQPQIGVSYCYVRSPV 452 + ++ G++ ++ + E T + L+Q F G ++ + + Sbjct: 572 LSRIGGDEFVALISGIDNNEDATVAINQLRQVFEQPFIVSTGDHLRLTASMGVSLYPNDG 631 Query: 453 NHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLM 512 LL + A + N N L ++ + + + + L A+E N +LM Sbjct: 632 TDADTLLRNAD--AAMYRAKNDGRNNYAFYTESLTQQSFEHLKLQSALYGAIEQNALYLM 689 Query: 513 AQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQF-M 569 QP + V E LLR LISP F+PVA + GL I +WV+E + M Sbjct: 690 YQPKLDLVSRKTVGFEALLRWHDPQLGLISPAVFIPVAEKIGLIHEIGLWVLETACRQGM 749 Query: 570 AENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQA 629 R R A+N++ + ++ F +V ++LA+ + A L EVTES + N A Sbjct: 750 RWLREGKHFGRIAVNVAGQQLQRSSFVDDVKRVLAETGLPAKHLELEVTESVMMQNPDLA 809 Query: 630 QITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASI 689 L+ L +LG ++++DDFGTGY+S LK + LKID SF+R+I ++ + I ++ Sbjct: 810 IRDLKRLGDLGIELSVDDFGTGYSSLNYLKKLPIHKLKIDQSFVRDIPFDTNNTAIAKAV 869 Query: 690 CHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIE 741 L K+ ++AE VE +E + + D QGYL +PQ D + Sbjct: 870 IALGHALKLDIIAEGVETKEQADFLQQNQCDQAQGYLFSRPQLPEDLDAFLS 921 >UniRef50_B9Z1R5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z1R5_9NEIS Length = 1086 Score = 697 bits (1801), Expect = 0.0, Method: Composition-based stats. Identities = 121/532 (22%), Positives = 219/532 (41%), Gaps = 24/532 (4%) Query: 232 MPLNEKSTIFSTNYTLSLLLPLMMWGAMRYGYKLISLLWAVV-----LMISIHSYQNYIP 286 + ++ T Y L+ + R + + + + Sbjct: 547 IIAVNQAFTRITGY-PPELVIGRVSRIFRDNTSWSVAMLDGLARHGHWQGEMLDRRRSHE 605 Query: 287 IYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNV----R 342 YP + + + + +++ + + T ++ R+Q LA DP+ LPN Sbjct: 606 WYPAELSISAVRDDAGAITNYVGVFADI--TVRKQAEERLQFLANHDPLTRLPNRSWLIA 663 Query: 343 ALNRALRD----APWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVY 398 L ++ A+ +L + +++ ++G + ++ + L ++ + Sbjct: 664 CLEDRIQQIASSGQQVAVMFLDLDRFKLINDSFGHQTGDELLRETASRLEQVVGGRGQIA 723 Query: 399 QLSGNDLALRLNTESHQERITALDSHLKQF---RFFWDGMPMQPQIGVSYCYVRSPVNHI 455 +L G++ L ++ + Q ++ L + + +G + + + Sbjct: 724 RLGGDEFTLLVSHFASQATLSTLAEDILAVLAQPLWLEGQELIVTGSLGISVYPHDGSDA 783 Query: 456 YLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQP 515 LL + + A +N + A + + +++ + L+QALE F L QP Sbjct: 784 RTLLKNADVA--MYRAKEAGKNTYQFFAAEMNAQAIERLQLERGLRQALERGEFELHFQP 841 Query: 516 ITGMRG--DVYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENR 573 I E+LLR + L+SP F+P+A E GL I WVI + +AE Sbjct: 842 IVAAATYRLEALEVLLRWRHPELGLVSPVRFIPLAEETGLIRPIGDWVIRQACRQLAEWD 901 Query: 574 A-KMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQIT 632 + R AINLS Q ++V+ LA+ I A +L E+TES + N +A Sbjct: 902 CLGLHVPRLAINLSARQFEQQGLIMQVAGALAEAGIAAGRLELEMTESMVMQNPSEAVSL 961 Query: 633 LQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHL 692 L L+ LG +++IDDFGTGY+S + LK D LKID SFI + + + I +I + Sbjct: 962 LGELKALGVRLSIDDFGTGYSSLSYLKRFPLDTLKIDRSFIEGLPGDGDNAAIAEAILAM 1021 Query: 693 ARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIR 744 AR VVAE VE E + + G +QGYL +P P + ++ Sbjct: 1022 ARKLSFSVVAEGVETEAQAAFLCAKGCQLLQGYLFSRPLPAAELPAFLQQRS 1073 >UniRef50_Q21SH7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q21SH7_RHOFD Length = 658 Score = 697 bits (1801), Expect = 0.0, Method: Composition-based stats. Identities = 121/531 (22%), Positives = 221/531 (41%), Gaps = 26/531 (4%) Query: 236 EKSTIFSTNYTLSLLLPL--MMWGAMRYGYKLISLLWAVV-----LMISIHSYQNYIPIY 288 + T Y+ + +L + + R+ + +W + + + + IY Sbjct: 132 NPAFSEITGYSAADVLDQTPALLRSGRHDSAFYAAMWDSINVSGHWQGEVWNRRKNSEIY 191 Query: 289 PGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL 348 P + I + V +++ + ++ R+ + LA+ DP+ LPN L L Sbjct: 192 PQLISIDVIRDHTGRVCNYVAVLTDL--SKLRSSQLELDFLAHHDPLTRLPNRLLLLSRL 249 Query: 349 RDA--------PWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQL 400 + AL L + + + ++G ++ + Q ++ L + + V + Sbjct: 250 QHGIELAQRDGTHLALLMLDLDRFKDINDSFGHLVGDELLQLVATRLVKQVRTIDTVGRF 309 Query: 401 SGNDLALRLNTESHQERITALDS---HLKQFRFFWD-GMPMQPQIGVSYCYVRSPVNHIY 456 G++ ++ + + E+ + + + + G+ ++ V Sbjct: 310 GGDEFSVLMEDVAGAEQAARVANDIIRVLSEPYGLSSGVEVRIGASVGISIYPDNGLTPE 369 Query: 457 LLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPI 516 L+L + ++ L + L + + ++ + RL++A+ + QP Sbjct: 370 LMLQQADSA--LYQAKIEGRGRFAYFSESLTQAARARIDIEVRLRRAITQGELRVYYQPQ 427 Query: 517 TGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRA 574 + V E L+R + + L+ P F+ +A GL ID WV+ T Q RA Sbjct: 428 VDIPSGRIVGAEALVRWQCPIEGLVPPARFITIAEATGLIGEIDDWVLRETCQQGQRWRA 487 Query: 575 -KMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITL 633 +P A+NLS Q V+Q+L A L E+TES + QA L Sbjct: 488 AGLPTLTLAVNLSAYQFLQGDISQTVAQVLRDTGYPAAFLELELTESALMQREAQAIQML 547 Query: 634 QHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLA 693 L+ LG ++AIDDFGTGY+S A LK D+LKID FI +I ++ D +IV +I +A Sbjct: 548 DRLKALGVRLAIDDFGTGYSSLAYLKLFPLDVLKIDKRFIDDIPAHRDDMEIVTAIIAMA 607 Query: 694 RMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIR 744 ++ V+AE VEN+E + + G D QGYL +P P + R Sbjct: 608 HSLRLKVLAEGVENKEQLAYLQTQGCDQFQGYLTSRPVPAAEFEKLFLSGR 658 >UniRef50_A6T0F0 Sensory box/GGDEF family protein n=2 Tax=Oxalobacteraceae RepID=A6T0F0_JANMA Length = 699 Score = 697 bits (1800), Expect = 0.0, Method: Composition-based stats. Identities = 114/478 (23%), Positives = 212/478 (44%), Gaps = 18/478 (3%) Query: 277 SIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVV 336 ++ + ++ +S + F A+ T ++ IQ A D + Sbjct: 224 ESRVHRRNGEVIWISENARSVYNSDGTLLFFEGTVEAI--TERKLHEAEIQFQATHDALT 281 Query: 337 HLPNVRALNRALRDAPWS--------ALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLS 388 LPN L ++ A A+ +L + + + + G + + + + L+ Sbjct: 282 GLPNRTLLYDRMQQAVLHSERYGKLTAIAFLDLDQFKFINDSLGHQVGDELLKITAQRLT 341 Query: 389 PLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLK---QFRFFWDGMPMQPQIGVSY 445 L + V + G++ L L + ++E IT + + + + Q + Sbjct: 342 SCLRESDTVARQGGDEFVLLLTDQPNEEAITHTMQRVLHEVSQPWKANDLEFQITCSIGL 401 Query: 446 CYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALE 505 LL ++ + N + + + + D++ ++NRL+QA+ Sbjct: 402 TLCPDDGRDAETLLKNADSA--MYKAKELGRNNFQYFSAEMNSSVTDRLELLNRLRQAIT 459 Query: 506 HNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIE 563 + F L QP + + E L+R + ++SP SF+P+A E GL + WV+ Sbjct: 460 NEDFVLHYQPKVSLASHQIIGAEALVRWNSAHSGMVSPASFIPLAEETGLIIPLGEWVLR 519 Query: 564 HTLQFMAENR-AKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNA 622 + + A P ++NLSP + + V ++L + +EA L E+TES Sbjct: 520 TACRQNRAWQDAGYPPIPISVNLSPRQLARGDIVEVVERILTETGLEAQHLELEITESVM 579 Query: 623 LTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLD 682 T+V+++ L L+ LG +I++DDFGTGY+S + LK D LKID SF+R+I ++ Sbjct: 580 TTDVEKSFALLTQLRSLGVKISLDDFGTGYSSLSYLKRFPVDTLKIDQSFVRDIATDQDS 639 Query: 683 YQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEI 740 IV +I L R + V+AE +E E+ + +L+ G D QGYL+ KP P + ++ + Sbjct: 640 AAIVKAIISLGRNLNLTVLAEGIETEDQFQFLLANGCDEGQGYLMSKPVPNKNFVDLL 697 >UniRef50_C0ZBT5 Probable signaling protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBT5_BREBN Length = 815 Score = 696 bits (1798), Expect = 0.0, Method: Composition-based stats. Identities = 113/470 (24%), Positives = 201/470 (42%), Gaps = 23/470 (4%) Query: 291 YTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRD 350 Y T I + + + + + + T ++ I+ +A+ D + +LPN + L + Sbjct: 349 YITLSPI-EENGEIVEMVGSMIDI--TERKKAEETIRYMAHYDSLTNLPNRTLFHEKLAE 405 Query: 351 APWSA--------LCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSG 402 A A + ++ + + + G + Q +++ L L + V +L G Sbjct: 406 AMLKAKQKDEKIGVMFIDLDRFKNINDTLGHSIGDVLLQAVANRLICCLRKEDSVSRLGG 465 Query: 403 NDLALRLNTESHQERITALDSHLK---QFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLL 459 ++ A+ L +H+E + + D + + + + I LL Sbjct: 466 DEFAIFLTGVTHRE-AGEIAQRIITSMSESITLDHIEIFITPSIGISMYPDDGDDIEALL 524 Query: 460 GELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGM 519 + A + + +N + + L + L K+ + L++AL+ F L QP + Sbjct: 525 KHAD--AAMYLAKEQGKNNYQFFSEELHQVLAKKLQLERELRKALDEKQFTLHYQPKIHL 582 Query: 520 RGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENR-AKM 576 + + E L+R + LI P F+P+A E GL + WV+ Q + A Sbjct: 583 QTGQIIGMEALIRWDHPDLGLIPPIQFIPIAEETGLIVPLGEWVMRTACQQTKAWQEAGF 642 Query: 577 PAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHL 636 A+N+S Q ++ +L + + L E+TES AL NV L L Sbjct: 643 TQLAVAVNISLRQFMQNNLIEMITSILEETGLAPQYLELEITESMAL-NVDYTIRILNRL 701 Query: 637 QELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMK 696 + LG I+IDDFGTGY+S + L D LKID SF+RN+ N + I+ +I H+A Sbjct: 702 KALGVSISIDDFGTGYSSLSYLSQFPIDRLKIDQSFLRNL--NPQNQAIIKTIIHMAHNM 759 Query: 697 KMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIRES 746 K+ V+AE VE E + + + +QGY KP P + + ++ R Sbjct: 760 KIAVIAEGVETHEHVDFLKEQLCNEVQGYFYSKPLPTKEIDSFLQVNRYG 809 Score = 68.1 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 8/102 (7%), Positives = 27/102 (26%), Gaps = 9/102 (8%) Query: 232 MPLNEKSTIFSTNYTLSLLLPL--MMWGAMRYGYKLISLLWAVVLMISIH-----SYQNY 284 + + Y + L+ + + + L+W + + + Sbjct: 158 ITYVNDKFCEISRYEVDELVGNTHRVINSRYHSKSFFKLMWETIKQGRVWKGEVKNRAKD 217 Query: 285 IPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRI 326 Y TT + + + ++ + T + + Sbjct: 218 GTEYWMNTTIVPFLDDRGVPYQYVSIRTDI--TDRIEAETAL 257 Score = 63.9 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 6/77 (7%), Positives = 24/77 (31%), Gaps = 7/77 (9%) Query: 255 MWGAMRYGYKLISLLWAVVLMISIH-----SYQNYIPIYPGYTTQLTITSSSYLVFSFIV 309 + + + LW + + + Y T + + S ++ ++ Sbjct: 55 IVDSGFHPRNYFKSLWDTISRGKVWKGEMKNRGKDGTEYWLSMTLVPFMNDSGFLYQYVA 114 Query: 310 NYMAVLATRQRAVVRRI 326 + T+++ + + Sbjct: 115 IGTDI--TKRKLMEESL 129 >UniRef50_C7LTY3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LTY3_DESBD Length = 1075 Score = 696 bits (1798), Expect = 0.0, Method: Composition-based stats. Identities = 113/532 (21%), Positives = 214/532 (40%), Gaps = 25/532 (4%) Query: 231 CMPLNEKSTIFSTNYTLSLLLPL--MMWGAMRYGYKLISLLWAVV-----LMISIHSYQN 283 + T Y+ + + + R+ +W + I + + Sbjct: 540 TIEQVNPGFTVITGYSADEAVGSNPRILKSDRHAQHFYQEMWTKLTQDGHWAGEIWNRRK 599 Query: 284 YIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRA 343 YP + T + + + +++ + + T + ++ A D + +PN Sbjct: 600 DGESYPEWLTISAVKNEAGQTTNYVSIFHDI--TELKRQQDALEYQAQHDALTGMPNRIL 657 Query: 344 LNRALR--------DAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGE 395 L LR AL + + + + G + + LS L LL G+ Sbjct: 658 LGDRLRMALAQLARSGGKLALLFFDLDNFKTINDGLGHGVGDELLVDLSRRLERLLRSGD 717 Query: 396 DVYQLSGNDLALRLNTESHQERITALDSHLKQF---RFFWDGMPMQPQIGVSYCYVRSPV 452 + +L G++ + L + + + + + F + + Sbjct: 718 TLARLGGDEFLILLPEIESVDAASHIATRMLDALKAPFHHGDVEYFVTASIGLTIAPDDG 777 Query: 453 NHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLM 512 N L+ + + + N + + +++M +L++A+E F L Sbjct: 778 NEAPKLIKNADMA--MYRAKSMGRNNYQYFTPEMDVAAHRRISMEYKLRKAIEAQEFELF 835 Query: 513 AQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMA 570 QP+ ++ + E L+R + +LISP F+P+A E L + WV+ Sbjct: 836 YQPLVHIQSGHILGAEALIRWRC-EGKLISPAEFIPLAEESALILPLGDWVLRTAAHQAK 894 Query: 571 ENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQ 630 + ++N+S A V + ++L ++ +L FE+TES + +V +A+ Sbjct: 895 LWQDAGHDLTMSVNISSRQFSGADLAVTLREVLLDTELRPGRLYFEITESMLMGDVSKAE 954 Query: 631 ITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASIC 690 TL +L+E G +DDFGTGY+S + LK + D LKID SFI++I +S IVA+I Sbjct: 955 TTLLNLREAGGTFFLDDFGTGYSSLSYLKRLPIDGLKIDRSFIKDITDDSDSRAIVAAIV 1014 Query: 691 HLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEP 742 +AR + +VAE VE + R + S+G +QGYL +P P D + Sbjct: 1015 SMARTLNLRIVAEGVETQAQRGLLASMGPIVLQGYLASRPVPAQDFEALLSR 1066 >UniRef50_C7RNY7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RNY7_9PROT Length = 1003 Score = 696 bits (1797), Expect = 0.0, Method: Composition-based stats. Identities = 147/724 (20%), Positives = 257/724 (35%), Gaps = 66/724 (9%) Query: 64 ALPGIALGIFVRKYAELGFY-ETLSLTANFIIIIILCWGG--YRVFTPRRNNVSHGDTRL 120 ++ G+ LGI L + F+++ LC+ G + R + Sbjct: 265 SVAGVVLGIGCAVLEFLQLRGRVRAAIGGFVVLSALCFLGSAWHATGYRAGAAVLSVLAV 324 Query: 121 ISQRIFWQIVFPATLFLILFQFAAFVGLLASRENLVGVMPFNLGTLINYQALLVGNLIGV 180 + + + VF L LF ++ GV F++ L VG L Sbjct: 325 ATMVLLVRGVFSGDASLRLFTLGLGATMVGG-----GVQAFSVVG----SGLEVGRLAA- 374 Query: 181 PLCYFIIRVVRNPFYLRSYY----SQLKQQVDAKVTKKEFALWLLALGALLL---LLCMP 233 F + + + + +++ K+ +W + L++ +C+ Sbjct: 375 --FAFPLGSLCQAAFWLAALIIRLRSEHRELHELEGKQAAIMWAMPDLILVIDRQGICLD 432 Query: 234 LNEK--STIFSTNYTL-----SLLLPLMMWGAMRYGYKLISLLWAVVLMISIHSYQNYIP 286 + + F T L S +LP G +R G + L L Sbjct: 433 YKQPYATRFFVTGDELLGKDVSAVLPSATAGTIRQGIE--RALHQGDLQSVFLDLPVEGS 490 Query: 287 IYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNR 346 ++ + +V + T Q+ +I+RLAY D + LPN ++ Sbjct: 491 MHHYEARIAP-----HGPDKVVVVVRDI--TLQKHSEEKIRRLAYFDTLTGLPNRQSFLE 543 Query: 347 AL--------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVY 398 L R AL +L + G + + G Q ++ L L G + Sbjct: 544 RLDRELLRARRTNHRMALLFLDLDGFKRINDTLGHSAGDCLLQTVADRLQEKLRAGAFIA 603 Query: 399 Q------------LSGNDLALRLNTESHQERITALDSHLKQF---RFFWDGMPMQPQIGV 443 + L G++ + L E + +++ + + Sbjct: 604 RPALDESSLHFARLGGDEFTVVLPDVDTVETACLIAQRIQELLGRPTLIGEQEIAVTSSI 663 Query: 444 SYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQA 503 LL +T + N + L ++A+ +++ Sbjct: 664 GIALFPDDGADAATLLKHADTA--MYYAKEQGRNNWQLYDRTLTTRTTARLALEGDIRKG 721 Query: 504 LEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWV 561 LE F L QP V E L+R + L+SP F+PVA E GL I WV Sbjct: 722 LERGEFRLFYQPQVSADDGTIVGVEALIRWQHPQQGLVSPARFIPVAEESGLIVPIGEWV 781 Query: 562 IEHTLQFMAENRA-KMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTES 620 + + + + + +P R A+N+S + A F V+ ++ I A +L E+TES Sbjct: 782 LTAACRQVRQWQQSGVPVPRVAVNVSARQLGAAGFLDTVAAIIVATGIAADRLELELTES 841 Query: 621 NALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNS 680 + + L L+ +G +IDDFGTGY+S + +K LKID SF+ + ++ Sbjct: 842 ILMDPEAKRIKGLSRLRAMGVHFSIDDFGTGYSSLSYIKRFPIGTLKIDQSFVHGLPQDA 901 Query: 681 LDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEI 740 D I +I +AR + VVAE VE E + +QGYL P P + + Sbjct: 902 DDAGITTAIISMARSLNLEVVAEGVETREQLAFLQRALCPKLQGYLFSYPLPPDEMEAIL 961 Query: 741 EPIR 744 R Sbjct: 962 RRGR 965 >UniRef50_Q3A1G1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A1G1_PELCD Length = 1061 Score = 696 bits (1797), Expect = 0.0, Method: Composition-based stats. Identities = 106/544 (19%), Positives = 195/544 (35%), Gaps = 40/544 (7%) Query: 232 MPLNEKSTIFSTNYTLSLLLP--LMMWGAMRYGYKLISLLWAVV-----LMISIHSYQNY 284 + T Y+L+ + + + + LW + H+ + Sbjct: 528 IEYANPKFTQITGYSLTEVHGKNPRLLKSGETSAEEYRDLWTTITAGREWHGEFHNKRKD 587 Query: 285 IPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRAL 344 ++ + + + + + + F+ + T ++ ++Q LA D + L N L Sbjct: 588 GSLFWEHASISPVRNDAGDISHFLAIKEDI--TDRKRYEEQLQHLATHDNLTGLANRALL 645 Query: 345 NRALRDAPWSALCYLRIP---------------GMEMLVKNYGIMLRIQYKQKLSHWLSP 389 L + A +++ + G + Q + L Sbjct: 646 QDRLEQSILFA-------KRSGRLVAALLLDLDRFKIINDSLGHSFGDRLLQIAADRLRE 698 Query: 390 LLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLKQ---FRFFWDGMPMQPQIGVSYC 446 + + V +L G++ + L +++E + + + F + + Sbjct: 699 SVRGADTVARLGGDEFVILLAEVANEEDVGKVAKKILDRITAPFQIADREITVTASLGIS 758 Query: 447 YVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEH 506 L+ + + N R A + + + + M L++AL+ Sbjct: 759 IYPQDGEDEETLIRNADIA--MYQAKEEG-NAFRLYAPEMNIVVHEAMEMETDLRRALDR 815 Query: 507 NHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEH 564 L QP + E L+R + +I+P F+P+A E GL I WV+E+ Sbjct: 816 GELLLHYQPKIDLDSGKITGAEALVRWQHPVRGMIAPGMFIPLAEETGLILPIGEWVLEN 875 Query: 565 TLQFMAENR-AKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNAL 623 + + P A NLS + ++L + L E+TES + Sbjct: 876 ICLQIKSWQTQGFPLVPIAANLSARQFRNDELIATIQRILQDTGLPPHLLELELTESMIM 935 Query: 624 TNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDY 683 NV+ A T+Q L LG +A+DDFGTGY+S L+ D LKID SFI ++ + Sbjct: 936 RNVQTAAETMQELNALGVSLALDDFGTGYSSLNYLRRFPVDCLKIDRSFISDVADDPSAA 995 Query: 684 QIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPI 743 + SI +A + VAE VE EE E + D QGYL P + + + Sbjct: 996 AVATSIIAIAHSLGLQAVAEGVETEEQLEFLRQCACDSYQGYLYSAPLAVEEFTAMLRQE 1055 Query: 744 RESA 747 Sbjct: 1056 STRT 1059 Score = 43.5 bits (102), Expect = 0.033, Method: Composition-based stats. Identities = 27/297 (9%), Positives = 71/297 (23%), Gaps = 35/297 (11%) Query: 50 LALMISMMMFFSWAALPGIALGIFVRKYAELGFYETLSLTANFIIIIILCWGGYRVFTPR 109 L L+ ++M W +PGI G + T+ + +++ Sbjct: 45 LGLLSIILMLSPWQYIPGIVFDTRSVLLGISGLFFGAVATS--VAMLMAAAFRLFQGGAA 102 Query: 110 RNNVSHGDTRLISQRIFWQIVFPATLFLILFQFAAFVGLLASRENLVGVMPFNLGTLINY 169 I+W+ + + G ++ L + Sbjct: 103 AWIGVGVIFASGIVGIYWK--YRNRKSAEQLTWWQLYGFGVLVHLIMLAFMLLLPWQTAF 160 Query: 170 QALLVGNLIGVPLCYFIIRVVRNPFYLRSYYSQLKQQVDAKVTKKEFALWLLALGALLLL 229 + L +L + + ++ + Q + Q+ + E L + + L Sbjct: 161 RVLHHISLPVLLIYPLATAMLGS----LMLKRQRRDQISKALQTSEERLRMALKASKQGL 216 Query: 230 LCMPLNEKSTIFSTNYTLSLLLPLMMWGAMRYGYKLISLLW------------------A 271 + + + I + Y L L + I+ + Sbjct: 217 YDLNVQSGNMIVNAEYALILGYDPQNFR--ETNGDWIARMHPEDRSAVLAVYRNYLAGKT 274 Query: 272 VVLMISIHSYQNYIPIYPGYTTQ---LTITSSSYLVFSFIVNYMAVLATRQRAVVRR 325 + + + + + + T +R + Sbjct: 275 EEFRAEFRQRTRCGQ--WKWVLSMGKIVERDTHGQPLRMLGTFSDI--TERRQSEEQ 327 >UniRef50_UPI0001C313CD diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C313CD Length = 763 Score = 695 bits (1795), Expect = 0.0, Method: Composition-based stats. Identities = 150/726 (20%), Positives = 275/726 (37%), Gaps = 55/726 (7%) Query: 57 MMFFSWAALPGIALGIFVRKYAELGFYETLSLTANFIIIIILCWGGYRVFTPRRNNVSHG 116 ++ WA +P +FV A + L I + L G R RR + Sbjct: 41 LLILLWAHVP----ALFVFALATGNPLQHALLEVVPIALCAL--VGQREQLGRRGRAAAV 94 Query: 117 DTRLISQRIFWQIVFPATLFLILFQFAAFVGLLASRENLVGVMPFNLGTLINYQALLVGN 176 L++ ++ T+ F V L A E ++ F + Q L+G Sbjct: 95 TIGLLTCSAVLVHLWDGTIEAHFHYFVMVVALAAYEEWFPYLLAFGY---VVLQHGLMGM 151 Query: 177 LIGVPLCYFIIRVVRNPFYLRSYYS------------------QLKQQVDAKVTKKEFAL 218 + + R+P++ + + ++ + A + A Sbjct: 152 MEPDSVYAHGTDDDRSPWFWAAIHGGFIAALGFASMVTWRANESVRAHLAASEQRFHRAF 211 Query: 219 WLLALGALLLLLCMPLNEKSTIF--STNYTLSLLLPLMMWGAM----RYGYKLISLLWAV 272 +G L+ L E + T Y L+ L +W R A Sbjct: 212 DDAPIGMALIGLDGRFREVNRSLASLTGYGAGKLVQLRLWDLSPADVRAEDHAAWPPSAG 271 Query: 273 VLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYV 332 + + + I G + S + ++V + V T ++ +++ A+ Sbjct: 272 MEAVEQRFQRADGTIGWGLWRYSLVQDESGIASHWVVQLLDV--TSRKQFEQQLAHQAHH 329 Query: 333 DPVVHLPNVRALNRALR--------DAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLS 384 DP+ LPN L + L+ A+ ++ + +++ + G + + +S Sbjct: 330 DPLTGLPNRALLTKRLQEALDLAREHDSGVAVIFVDLDNFKVINDSLGHDAGDRLLRNVS 389 Query: 385 HWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLK-----QFRFFWDGMPMQP 439 L +L P + + + G++LA+ L + E + + F + + Sbjct: 390 ERLRRVLRPEDLLARFGGDELAVCLERVADTEPANRIADRMATALRAPFVLDGEQRFVTA 449 Query: 440 QIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNR 499 G++ P LL + + A + + ++R D++ + + Sbjct: 450 SFGIALARPEDPDRSPDTLLRDAD--AAMYRAKERGKARTEIFDASMRRRAVDRLELESG 507 Query: 500 LQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSI 557 L++AL N ++ QP + V E LLR + ISP F+P+A + GL I Sbjct: 508 LREALARNQLRVVYQPEVSLESGRIVAVEALLRWEHPQHGPISPARFIPIAEQSGLIVPI 567 Query: 558 DMWVIEHTLQFMAENRA--KMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIF 615 WV+ + A A A+NLS + + V + ++ A +L Sbjct: 568 GAWVLREACRQAAHWNAESGGDGVVVAVNLSVRQLGASDLEATVRGAIDGARLPADRLCL 627 Query: 616 EVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKN-VNADLLKIDGSFIR 674 E+TES + + A +LQ L+ +G ++AIDDFG GY+S + L+ + D+LKID SFI Sbjct: 628 EITESAVMADPAAAIESLQTLKRVGVKLAIDDFGVGYSSLSHLRELLPIDVLKIDRSFID 687 Query: 675 NIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLI 734 +V D IV +I LAR + VAE VE + A+ ++ QG+ +PQP Sbjct: 688 GVVLREEDRAIVTAIVQLARSLGVDAVAEGVETSDQAAALRAMHCPIAQGFHFARPQPPA 747 Query: 735 DTLNEI 740 D + Sbjct: 748 DVAQLL 753 >UniRef50_C6XAD3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XAD3_METSD Length = 751 Score = 695 bits (1795), Expect = 0.0, Method: Composition-based stats. Identities = 155/753 (20%), Positives = 293/753 (38%), Gaps = 50/753 (6%) Query: 28 IFAHINTFAHISSGEVFLFYLPL--ALMISMMMFFSWAALPGIALGIFVRKYAELGFYET 85 I + +T + G +L+ PL +IS +M +AL FVRK +L F Sbjct: 4 ITSFFSTDGFMPHGHCYLWQPPLLWTYIISDLMIAVAYYSIPMALVYFVRKRPDLQFNWI 63 Query: 86 LSLTANFIIIIILCWGG--YRVFTPRRNN-----VSHGDTRLISQRIFWQIVFPATLFLI 138 + + FI + ++ P G L++ + W+++ A Sbjct: 64 FVMFSIFIFACGTTHLLSLWTIWNPDYWADASMKAVTGVASLVTAIMLWRLMPQALRIPS 123 Query: 139 LFQFAAFVGLLASRENLVGVMPFNLGTLINYQALLV----GNLIGVPLCYFIIRVVRNPF 194 Q V L + +L + LV L + + +R Sbjct: 124 TRQLEETVERLEHEVEERELAERSLAAFNDTLETLVQQRTAELEEINRLLKLEIDLRREA 183 Query: 195 YLRSYYSQLKQQVDAK--------VTKKEFALWLLALGALLLLLCMPLNEKSTIF----S 242 Y + + V + K+ +L + + + + Sbjct: 184 EQTLYAEKQRAVVTLQSIGDGVITTDKQSRVNYLNPVAERMTGWSNAEAQGKPLLEVFRI 243 Query: 243 TNYTLSLLLPLMMWGAMRYGYKLISLLWAVVLMISIHSYQNYIPIYPGYTTQLTITSSSY 302 N + L+P + +++G ++ L L+ + Y + I Sbjct: 244 VNESSRKLVPNPVDVVLQHG-EIYGLANHTALIG------RHGNEYAIEDSAAPIRDQDG 296 Query: 303 LVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL--------RDAPWS 354 V ++ + V + R + ++ LA D + LPN LN L RD + Sbjct: 297 NVLGVVLVFHDV--SEARNMANKMTYLAEHDYLTGLPNRLLLNDRLNQALTIARRDQEFI 354 Query: 355 ALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESH 414 AL +L + + + + G + Q + ++ L L + + + G++ + L ++ Sbjct: 355 ALMFLDLDHFKNINDSLGHEVGDQLLKMVARRLESCLRASDTISRQGGDEFMILLPELTN 414 Query: 415 QERITALDSHLKQ---FRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIV 471 + L + + + + LL + A + Sbjct: 415 YFSPAEVAEKLLAAATVPYEIGSHEITVSASIGIAVFPDDGENGELLTKNAD--AAMYHA 472 Query: 472 TNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILL 529 + N + + + + + ++L++A+E N F L QP +R V E L+ Sbjct: 473 KSLGRNNYQFFTRAMNERVMEIAELESKLRRAVERNEFVLYYQPKIDIRTGQVVGAEALI 532 Query: 530 RMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRA-KMPAHRFAINLSPT 588 R + + L++PD F+P+A + GL I +WV+ + E +A + A+NLS Sbjct: 533 RWQHPSWGLVAPDRFIPIAEDSGLIRPIGLWVMREACRQNQEWQAAGLARIPVAVNLSTV 592 Query: 589 SVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDF 648 + Q F EVS++L +E L EVTES A+ + L L+ +G ++A+DDF Sbjct: 593 QLRQHNFLQEVSEILLMSGLEPDYLELEVTESVAIHAETEVINWLHKLRSMGVKLALDDF 652 Query: 649 GTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENE 708 GTGY+S + LK + + +KID SFIR+I ++ D I+ +I ++ ++ V+AE VEN Sbjct: 653 GTGYSSLSYLKRLPINNVKIDKSFIRDIETDPDDATIITAIIRMSHGLRLNVIAEGVENI 712 Query: 709 EIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIE 741 E + G D MQG++ +P P + ++ Sbjct: 713 NQLEFLKKEGCDQMQGFIASRPVPADEFALLLQ 745 >UniRef50_Q20JY5 Sensory box/GGDEF family protein n=1 Tax=uncultured bacterium RepID=Q20JY5_9BACT Length = 874 Score = 695 bits (1795), Expect = 0.0, Method: Composition-based stats. Identities = 105/481 (21%), Positives = 192/481 (39%), Gaps = 26/481 (5%) Query: 283 NYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVR 342 + + + I+ + T ++ I+ LAY D + L N + Sbjct: 395 KDGKKVGVNISGAGFFDNHDKLQGSIITLQDI--TERKKTEEEIKFLAYHDVLTGLLNRK 452 Query: 343 ALNRALRD----------------APWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHW 386 + L D AL +L + + + G + + + ++ Sbjct: 453 SFYTRLEDELIRSYSYDGDRRRIKGHKWALFFLDVDRFKYVNDTLGHDVGDELLKVVAVR 512 Query: 387 LSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLKQF---RFFWDGMPMQPQIGV 443 L L + +++L G++ + LN + + + +++ + + + Sbjct: 513 LKNCLRKSDYIFRLGGDEFTIILNDLTDDTDMAKVAQKIRKAIARPCRIKDHELYITVSI 572 Query: 444 SYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQA 503 + + L+ + + + R + R+ +++ + N L+ A Sbjct: 573 GISIYPDDGDDVETLVKNADIA--MYAAKEENQ-GYRFFIEEMNRKTLERMMLENNLRNA 629 Query: 504 LEHNHFFLMAQPITGMRGD-VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVI 562 L+H+ + QP+ V E LLR LISP F+P+A E GL I WV+ Sbjct: 630 LQHDQLIIYYQPLVDSTNQIVGMEALLRWHHPELGLISPSQFIPLAEETGLIVPIGKWVL 689 Query: 563 EHTLQFMAENRA-KMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESN 621 Q + A+NLS + + Q+L + L EVTES Sbjct: 690 RCACQQARKWHEMGYTRFYVAVNLSVRQFREPDLVETIEQILEATDLPPDCLKLEVTESG 749 Query: 622 ALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSL 681 + + +QA ++ L+ G +IDDFGTGY+S + LK D LKID SF+ + +N Sbjct: 750 IMEHPEQAIAKMKMLRAKGIHFSIDDFGTGYSSLSYLKRFPIDTLKIDRSFVIDSTTNKD 809 Query: 682 DYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIE 741 D +I+ +I +AR M VAE VE +E ++ ++ G MQGY G+P P + ++ Sbjct: 810 DQEIIKTIIAMARNLGMDTVAEGVEAKEQQDFLIHHGCHMMQGYYFGRPMPAEKFEDMLQ 869 Query: 742 P 742 Sbjct: 870 T 870 Score = 51.6 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 8/101 (7%), Positives = 31/101 (30%), Gaps = 8/101 (7%) Query: 232 MPLNEKSTIFSTNYTLSLLLP--LMMWGAMRYGYKLISLL---WAVVLMISIHSYQNYIP 286 + + Y + LL + M+ + L W ++ + + Sbjct: 215 IIYMNPAGAEMHGYQVEELLGQDVSMFVPPEHRKPLTLERIKEWKGLIR-ESVNIRKDGT 273 Query: 287 IYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQ 327 + + + ++ F+ + + + T ++ ++ Sbjct: 274 TFLVWLMSEIVKNAKGEPFAIVTSCEDI--TERKQAEEALR 312 >UniRef50_C5V0L7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V0L7_9PROT Length = 951 Score = 695 bits (1794), Expect = 0.0, Method: Composition-based stats. Identities = 120/531 (22%), Positives = 222/531 (41%), Gaps = 31/531 (5%) Query: 236 EKSTIFSTNYTLSLLLP--LMMWGAMRYGYKLISLLWA-----VVLMISIHSYQNYIPIY 288 S +T ++ +L + G+ R+ +W + + IY Sbjct: 408 NHSFELTTGFSEQEVLGKNPRLLGSGRHNQDFYKSMWEVLNRVGSWSGELWDRRKNGEIY 467 Query: 289 PGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNR-- 346 P + T + + + ++ ++ + T ++ I LA+ DP+ LPN R L Sbjct: 468 PKWLTITAVKNRD-EISHYVGVFVDI--TERKKAEEEIHNLAFFDPLTQLPNRRLLLDRM 524 Query: 347 ------ALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQL 400 + R + AL ++ + ++L G + ++SH L+ L + V + Sbjct: 525 RLALGLSARSKNFGALMFIDLDHFKVLNDTKGHEYGDKMLIEVSHRLTQSLRDTDSVARF 584 Query: 401 SGNDLALRLNTESHQERITA-----LDSHLKQ---FRFFWDGMPMQPQIGVSYCYVRSPV 452 G++ + L + S + I + +++ + + + + Sbjct: 585 GGDEFVVLLESLSVNQDIAVAQAGSIAEKMRESLSQTYIIESYAHESTPSIGVVLFNGDA 644 Query: 453 NHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLM 512 I LL + + + N R +Q L+ + M L+QAL ++ F L Sbjct: 645 IEIDELLKRADLA--MYQAKESGRNTVRFFESAMQATLESRTLMERALRQALSNSEFELY 702 Query: 513 AQPITGMRGDV-YHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAE 571 Q T ++ E+LLR ++ ISP F+P+A + L I WV+E+ + Sbjct: 703 YQVQTNQANELLGAEVLLRWHSQSLGPISPAQFIPLAEQTKLILPIGEWVLENACARLKA 762 Query: 572 NRAK--MPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQA 629 + R A+N+SP Q F +V L + +L E+TE+ L +V +A Sbjct: 763 WETHPTLSKLRLAVNISPVQFHQPDFVRQVQAALTDSGVNPRRLELELTENLVLEDVDEA 822 Query: 630 QITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASI 689 + L+ LG + ++DDFGTGY+S +K + D LKID SF+R+I+++ D +V +I Sbjct: 823 IQKMSALKALGVRFSMDDFGTGYSSLQYIKRLPIDQLKIDQSFVRDILTDPGDAMMVQTI 882 Query: 690 CHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEI 740 +AR V+AE VE ++ G + QGY +P L + + I Sbjct: 883 AGMARNFGYEVIAEGVEEHAQLLPLIERGCNTFQGYFFSRPVALAEFEHLI 933 >UniRef50_Q39X25 Diguanylate cyclase/phosphodiesterase n=2 Tax=Geobacter RepID=Q39X25_GEOMG Length = 633 Score = 695 bits (1794), Expect = 0.0, Method: Composition-based stats. Identities = 110/438 (25%), Positives = 189/438 (43%), Gaps = 17/438 (3%) Query: 318 RQRAVVRRIQRLAYVDPVVHLPNVRALNRALR--------DAPWSALCYLRIPGMEMLVK 369 + RI+++AY D + LPN R N LR A+ +L + +++ Sbjct: 184 ERSRAEERIRQMAYYDSLTGLPNRRLFNDRLRQSLALAQRHKRPLAVMFLDLDRFKLIND 243 Query: 370 NYGIMLRIQYKQKLSHWLSPLLE-PGEDVYQLSGNDLALRLNTESHQERITALDSHLKQF 428 G + + ++ L G+ V + G++ + L+ S + + + Sbjct: 244 TLGHAVGDRLLMAVAKRLRNCCRREGDTVARQGGDEFIINLSAISDVKDAFTVAQKIIDV 303 Query: 429 ---RFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMY 485 F DG + + L+ + + N + A Sbjct: 304 FRTPFVIDGYELFITTSIGISVYPHDGRSGDALVKNADVA--MYRAKEQGRNNCQLFAPE 361 Query: 486 LQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDS 543 + +++++ N +++ALE + F L QP + E L+R + + L+ P Sbjct: 362 MNARAFERLSLENDMRRALERDEFVLHYQPKVNVEHGQIACMEALVRWQHPSMGLVPPSR 421 Query: 544 FLPVAHEFGLSSSIDMWVIEHTLQFMAENR-AKMPAHRFAINLSPTSVCQARFPVEVSQL 602 F+P+A E GL + WV+ Q + A P + A+NLSP + Q V+++ Sbjct: 422 FIPLAEETGLIVPLGEWVLRTACQQNRAWQDAGYPTMQVAVNLSPRQLRQGDLSETVARV 481 Query: 603 LAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVN 662 LA+ + L+ EVTES + + ++ T + L +G +I+IDDFGTGY+S LK Sbjct: 482 LAETGLAPGWLVIEVTESILMDDAEETIRTFRRLDRMGVRISIDDFGTGYSSLHYLKKFP 541 Query: 663 ADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYM 722 LKID SF+R I SN D I ++ +A+ + VVAE VE E E + +L YM Sbjct: 542 VHTLKIDRSFVREIASNPDDEAIAGAVISMAKGLNLGVVAEGVETVEQMEVLRALNCRYM 601 Query: 723 QGYLIGKPQPLIDTLNEI 740 QG+L +P P + Sbjct: 602 QGFLFSEPAPAEQFTPVL 619 >UniRef50_A4Y0E0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=23 Tax=Pseudomonas RepID=A4Y0E0_PSEMY Length = 766 Score = 694 bits (1791), Expect = 0.0, Method: Composition-based stats. Identities = 119/521 (22%), Positives = 218/521 (41%), Gaps = 25/521 (4%) Query: 236 EKSTIFSTNYTLSLLLPLM--MWGAMRYGYKLISLLWAVV-----LMISIHSYQNYIPIY 288 + T Y+ +L + + R+ LW + + + + IY Sbjct: 230 NPAFSRITGYSAEEVLGQHPTLLKSGRHDAAFYQSLWQALHNRDAWSGEVWNRRKSGEIY 289 Query: 289 PGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL 348 P + I + ++ + + T + R + LA+ DP+ +LPN + Sbjct: 290 PQWQCIRVIHDEHGRISHYVAVFSDI--TALKRSQRELDYLAHHDPLSNLPNRLLFTERI 347 Query: 349 RDAP--------WSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQL 400 A A+ + + + + ++ G + + + L L G + +L Sbjct: 348 AHALERSKSEQLRGAVLLIDLDHFKHINESLGHNVGDLLLKSVGERLQQDLPGGCTLARL 407 Query: 401 SGNDLALRLNTESHQERITALDSHLK---QFRFFWDGMPMQPQIGVSYCYVRSPVNHIYL 457 G++ L T + + L +L + F D + + + + Sbjct: 408 GGDEFGLLSETCADAPQAAELAQNLLRCLEAPFRLDEHELYIGASIGISLFPDDADSVEQ 467 Query: 458 LLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPIT 517 +L ++ L ++ L + +V + + L+ AL+++ + QP+ Sbjct: 468 VLRNADSA--LFKAKSSGREGYAFYVQELTDYARQRVELASSLRHALDNHELRVFYQPLH 525 Query: 518 GMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAK 575 + V E L+R + LI P F+P+A + G+ ID WV+E M A+ Sbjct: 526 DLENGNPVGMEALVRWQHPQRGLIPPAEFIPIAEDNGMIGPIDAWVLEQACGQMMRWNAE 585 Query: 576 MPAHR-FAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQ 634 A R A+N+S + ++V+Q+LA+ + QL EVTES + + A L Sbjct: 586 GSALRFVAVNVSSRLFSRGELDLKVAQVLAETGLSPQQLELEVTESAIMEDPDAALSLLT 645 Query: 635 HLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLAR 694 L+ LG ++AIDDFGTGY+S ARLK + D LK+D SF+R + + D I ++ L Sbjct: 646 RLRALGVRLAIDDFGTGYSSLARLKRLPVDKLKLDQSFVRGLPDDIEDAAIARAVIALGH 705 Query: 695 MKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLID 735 + V+AE +E+ + + +LG DY QGY G+P P+ Sbjct: 706 SLGLNVLAEGIESPAQVDFLRALGCDYGQGYHFGRPAPVTA 746 >UniRef50_B3PKJ2 EAL domain protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PKJ2_CELJU Length = 798 Score = 694 bits (1791), Expect = 0.0, Method: Composition-based stats. Identities = 116/527 (22%), Positives = 217/527 (41%), Gaps = 25/527 (4%) Query: 242 STNYTLSLLLPLMMWGAM--RYGYKLISLLWAVV-----LMISIHSYQNYIPIYPGYTTQ 294 Y +L + Y L +++ + + + +P + + Sbjct: 266 IMGYREQDVLGVDTLEVGAKLQTYSFYRNLVSLLKERGHWQGELINQRKSGEEFPSWFSV 325 Query: 295 LTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL------ 348 +T+S +I + + T + +I+ LA+ D + LPN LN L Sbjct: 326 TQVTNSRGEPEHYIAIFNDI--TEHKNSRAQIEFLAHHDALTGLPNRILLNDRLEMAITQ 383 Query: 349 --RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLA 406 R + ++ + + + + G + Q Q+ + L+ + G+ V +L G++ Sbjct: 384 VRRQGEKLGILFIDLDRFKNVNDSLGHGVGDQILQEAAKRLTANVRTGDTVSRLGGDEFV 443 Query: 407 LRLNTESHQERITALDSHLK---QFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELN 463 + + + L L+ Q + DG+ + + L+ + Sbjct: 444 VLFPRVRTEGNLADLTIKLREQLQLPYTVDGISLHITPSIGIAVYPDDGEDPNTLIKNAD 503 Query: 464 TVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDV 523 A + + N + L + D++ + + L+ A++ F L QP Sbjct: 504 --AAMYLAKEKGRNNYQFYTPTLNAKTLDRLKLESDLRSAIDAGDFELHYQPQIIGSSGQ 561 Query: 524 --YHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENR-AKMPAHR 580 E L+R + LISP F+P+A E GL + WV+ ++ +AE R Sbjct: 562 LWGLEALIRWRHRERGLISPAEFIPLAEETGLIVGLGDWVLVQAVKQLAEWRRQGHNHLV 621 Query: 581 FAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELG 640 ++N+S Q F V +L + Q+ + E+TE+ + +V+ A TL+ L+ELG Sbjct: 622 VSVNISALQFRQGDFLDRVKHILQEAQLVPDAIELELTETMLMQDVQSAIQTLKGLRELG 681 Query: 641 CQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLV 700 +IAIDDFGTG++S L+++ ++LKID SF+R ++ IV SI LA+ Sbjct: 682 FRIAIDDFGTGFSSLNYLRHLPINVLKIDQSFVREMLQEPESLAIVESIIALAQALGKET 741 Query: 701 VAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIRESA 747 +AE VE + + + G MQGY +P P + + +S Sbjct: 742 IAEGVETRAEFDVLQARGCRLMQGYFFARPMPPVIFDQWYQQQTQST 788 >UniRef50_Q47FU0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47FU0_DECAR Length = 1006 Score = 693 bits (1790), Expect = 0.0, Method: Composition-based stats. Identities = 110/533 (20%), Positives = 213/533 (39%), Gaps = 25/533 (4%) Query: 232 MPLNEKSTIFSTNYTLSLLLP--LMMWGAMRYGYKLISLLWAVV-----LMISIHSYQNY 284 + + T YT + A R + +W + I + Sbjct: 476 ILTVNPAFTRLTGYTSEEAVGRDPSFLSAGRTMPEEYERMWNGIAERGFWQGEIWDRRKD 535 Query: 285 IPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNV--- 341 IYP + + I ++ + ++ V + +RA R+ +A+ D + L N Sbjct: 536 GGIYPKWMSISVIRGEDGMIRYHVAHFTDV--SSERAAEERLHHMAHHDVLTGLLNRLSL 593 Query: 342 -----RALNRALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGED 396 +AL A RD A+ ++ + +++ G + + ++++ L + + Sbjct: 594 KGRLDQALAAARRDGSRVAVLFVDLDRFKVINDTLGHHVGDELLIEVANRLRDGVRDSDV 653 Query: 397 VYQLSGNDLALRLNTESHQERITALDSHLK---QFRFFWDGMPMQPQIGVSYCYVRSPVN 453 V ++ G++ + L+ H + + L + G + + + Sbjct: 654 VARVGGDEFVIMLSGVEHTSAVAMVAEKLVFSVGQSYQIGGYDLYSTPSIGIAIYPTDGE 713 Query: 454 HIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMA 513 +L+ + A + A N + + +++ + L++AL + F L Sbjct: 714 DGDILMKNAD--AAMYHAKMAGRNNFQFFDAKMNEAALERLNTEHALRRALANQEFCLYY 771 Query: 514 QPITGMRGDVYH--EILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAE 571 QP+ + + E L+R L+ P F+ +A E GL + WV+ + +A+ Sbjct: 772 QPVIDLASNRVASLEALIRWNHPEKGLLLPGKFIGIAEETGLIQPLGEWVLWAACRQLAD 831 Query: 572 NRA-KMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQ 630 A + + +N+S + P+ ++ Y I+ LIFE+TES A+ + Sbjct: 832 FAAAGISGIKMGVNISAIQMRNGNLPLLARGVIEAYDIDPRNLIFEITESVAMEQPTETV 891 Query: 631 ITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASIC 690 L L +G +AIDDFGTGY+S + L+ + LK+D SF+ I I + Sbjct: 892 RILDLLNAMGVSVAIDDFGTGYSSLSYLRMFPINHLKLDRSFVEQIGEEIDGCVICDATI 951 Query: 691 HLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPI 743 LA ++ VVAE VE + + + S G D +QG+L +P P + L I Sbjct: 952 GLAHSLELKVVAEGVETQAQLDYLRSRGCDMVQGFLFSRPVPADEVLAFIRQY 1004 >UniRef50_A1ATC4 Periplasmic sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ATC4_PELPD Length = 876 Score = 693 bits (1789), Expect = 0.0, Method: Composition-based stats. Identities = 105/481 (21%), Positives = 191/481 (39%), Gaps = 20/481 (4%) Query: 275 MISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDP 334 + + + S + + + ++ + +A+ D Sbjct: 383 LGEHTVRAEDGSMVEVDLNANLV--SYGEQQVICMVLRDI--SERKRFEGELMHMAHHDA 438 Query: 335 VVHLPNVRALNRALRDA--------PWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHW 386 + LPN LR A+ YL + +++ G ++++ Sbjct: 439 LTGLPNRTLFFDRLRQGLYKKERSGKMLAVIYLDLDRFKIINDTLGHHTGDMLLKEVADR 498 Query: 387 LSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLK---QFRFFWDGMPMQPQIGV 443 L ++ + + +L G++ + ++ + + + F + M + Sbjct: 499 LRGVVRKADTISRLGGDEFTIIIDEIATPADSLLVAEKILHVFSAPFRLEKHEMFITASM 558 Query: 444 SYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQA 503 + + LL +T + N + + + + ++++M L+ A Sbjct: 559 GVTLYPNDGDTAEKLLKNADTA--MYHAKEEGRNTYQFFSEEMNSRVSERLSMETGLRHA 616 Query: 504 LEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWV 561 L N F L QP V E L+R + LI PD+F+P+A E GL I WV Sbjct: 617 LARNEFLLHYQPRVNTTTGRIVGVEALIRWQQPQKGLILPDAFIPLAEETGLIIPIGEWV 676 Query: 562 IEHTLQFMAENR-AKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTES 620 + +T + A R ++N+S P + +L + ++ L E+TES Sbjct: 677 LRNTCTQARAWQEAGFAQMRISVNISCRQFTHDNLPDTIRGILRETGLQPSCLELEITES 736 Query: 621 NALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNS 680 + N ++A L L+E+G IAIDDFGTGY+S + LK + AD+LKID SF+ I N Sbjct: 737 VIMLNPERAISLLNELKEMGISIAIDDFGTGYSSLSLLKRLPADILKIDKSFVSGIPGNK 796 Query: 681 LDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEI 740 D +VA+I +L + +VAE VE +E + +QGY KP P + Sbjct: 797 SDETLVATIINLGHNMGLGLVAEGVERQEQLHFLEERNCQEVQGYYFSKPLPAETLQPLL 856 Query: 741 E 741 + Sbjct: 857 K 857 >UniRef50_B1Y791 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y791_LEPCP Length = 1066 Score = 693 bits (1789), Expect = 0.0, Method: Composition-based stats. Identities = 117/533 (21%), Positives = 227/533 (42%), Gaps = 25/533 (4%) Query: 232 MPLNEKSTIFSTNYTLS--LLLPLMMWGAMRYGYKLISLLWAVV-----LMISIHSYQNY 284 + ++ T Y+ + + + + + R+ + LW + + + + Sbjct: 525 IVSVNRAFTEITGYSETEAVGMSPRLLQSGRHEPAFFTRLWNQLLTHGRWQGEVQNRRKN 584 Query: 285 IPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRAL 344 +Y + + T+ ++ + + T Q+ +R+Q LA+ DP+ LPN + Sbjct: 585 GELYTQWMSVSTVRDEHDQPTHYVSVFTDI--TPQKEAEQRLQHLAHFDPLTQLPNRLMV 642 Query: 345 NRALRDA--------PWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGED 396 L A A+ ++ + + + + G + ++ L + Sbjct: 643 LSRLEHAIASAARAERRVAVLFIDLDNFKTVNDSLGHSAGDDLLRAVADRLGTRTRREDT 702 Query: 397 VYQLSGNDLALRLNTESHQERITALDSHL---KQFRFFWDGMPMQPQIGVSYCYVRSPVN 453 + +L G++ L L + + L + F G + Q + Sbjct: 703 LGRLGGDEFILMLEHLREPQDAAQVAQELIGLLETPFRVAGQEVYVQASIGISLYPDDGL 762 Query: 454 HIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMA 513 + L+ + + A + A + R L + ++A+ RL++ALE+ F L Sbjct: 763 EVGELVRDAD--AAMYQAKRAGRGVYRFYTESLTTAAQSRLALDTRLRRALENKEFVLWY 820 Query: 514 QPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAE 571 QP+ + + E L+R+ I P F+P+ E G +++ WV + + Sbjct: 821 QPLYRLADRCLIGLEALVRLNQPGLPPIGPAEFIPLLEETGQITTLGAWVTQEACRQGRA 880 Query: 572 N-RAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQ 630 + R AINLSP + + + V + L + + A +L E+TES + ++A+ Sbjct: 881 WLDEGLDFGRIAINLSPQEIRRGQTDERVREALERSGLPAERLELELTESGLMEQGERAE 940 Query: 631 ITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASIC 690 L L+ LG ++AIDDFGTGY+S A LK LKID SF+R++ +++ D Q+V ++ Sbjct: 941 AFLHRLRALGVRLAIDDFGTGYSSLAYLKRFPVSKLKIDRSFVRDLPADANDAQLVQTMV 1000 Query: 691 HLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPI 743 + R + V+AE VE E + + SLG D QGY P+P + + + P+ Sbjct: 1001 SMGRNLGISVLAEGVETEAQFDYLRSLGCDAAQGYFFSPPRPADEARHWLRPL 1053 >UniRef50_C6P6Y2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6Y2_9PROT Length = 814 Score = 693 bits (1789), Expect = 0.0, Method: Composition-based stats. Identities = 145/749 (19%), Positives = 272/749 (36%), Gaps = 50/749 (6%) Query: 43 VFLFYLPLALMISMMMFFSWAALPG----------IALGIFVRKYAELGFYETLSLTANF 92 V L ++ ++ ++ + + + L +R A Sbjct: 71 VSKVSLITSISLAAILAYIQRTVVPSSELLVWCLLMVLASLLRAALVYSPQTLRLDDAAA 130 Query: 93 IIIIILCWGGYRVFTPRRNNVSHGDTRLISQRIFWQIVFPATLFLILFQFAAFVGLLASR 152 + + + V + + + + +F L S Sbjct: 131 VQARLQKFRIGVVVAGAVWGSAGLLLFPAHHPQYVMFLIFTLAGMTAGGVISFSADLVSA 190 Query: 153 ENLVGVMPFNLGTLINYQALLVGNLIGVPLCYFIIRVVRNPF-----YLRSYYSQLKQQV 207 ++ + + + +GV + ++ ++ + + +++ Sbjct: 191 VAFSVLLSLPVAIRLFVTGDHLSEAMGVAVLLYLGFMIASIRRINQNICENIILRIEAAA 250 Query: 208 DAKVTKKEFALWLLALGALLLLLCMPLNEKSTIFSTNYTLSLLLPLMMWGAMRYGYKLIS 267 ++ + L L L + N I N L+ LL + + KL+ Sbjct: 251 REGKVRESEERYRLLLSHLPVG-IFHYNTDLVITYCNDRLAELLHNSVEHVIGLDMKLVK 309 Query: 268 L-----LWAVVLMISIHSYQN-YIPIY-----PGYTTQLTITSSSYLVFSFIVNYMAVLA 316 L +++ Y+ Y Y T + + I + Sbjct: 310 DQAILPSLRKALEGERSNFEGHYLATYSDAEGWAYITCTPFHDHNGQIAGGIAIVQDI-- 367 Query: 317 TRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRD--------APWSALCYLRIPGMEMLV 368 T +A +I LA+ DP+ LPN R L L+ AL ++ + + L Sbjct: 368 TEHKAAEEKINNLAFYDPLTGLPNRRLLLDRLQHALASSARSGREGALLFIDLDNFKALN 427 Query: 369 KNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTE-----SHQERITALDS 423 G + ++++ L+ + G+ + +L G++ + L + A+ Sbjct: 428 DTLGHDMGDLLLRQVAQRLASCVREGDSIARLGGDEFVVMLEDLGGHDLEAAAQTEAVGE 487 Query: 424 HLKQ---FRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQR 480 + + + + LL + + A N R Sbjct: 488 KILAMLGLPYQLVAHEYRCTPSIGATLFSGHELAKEELLKRADIA--MYQAKQAGRNTVR 545 Query: 481 RGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD-VYHEILLRMKGENDELI 539 +Q + +VA+ L +AL+ F L Q G + E L+R L+ Sbjct: 546 FFDQQMQDAVTARVALEGELHKALDRQQFRLHYQIQVDASGRPLGAEALIRWMHPERGLV 605 Query: 540 SPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMP--AHRFAINLSPTSVCQARFPV 597 PD F+ +A E L I WV++ + + P A+N+S T Q F Sbjct: 606 PPDQFIGMAEETDLILPIGQWVMDTACAQLKTWQQHAPTRDLVLAVNVSATQFHQLDFVF 665 Query: 598 EVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYAR 657 +V + ++ I+ L E+TES L N++ T+ L+E+G Q ++DDFGTGY+S Sbjct: 666 QVRATVQRHAIDPKLLKLELTESMLLENIEDTIRTMNALKEIGVQFSLDDFGTGYSSLQY 725 Query: 658 LKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSL 717 LK + D +KID SF+R+I S+S D +IV +I +A+ + V+AE VE EE R+ + Sbjct: 726 LKRLPLDQIKIDQSFVRDIASDSNDREIVGTIIAMAQNLYLDVIAEGVETEEQRQFLQDN 785 Query: 718 GIDYMQGYLIGKPQPLIDTLNEIEPIRES 746 G + QGYL GKP P+ ++P R S Sbjct: 786 GCTHFQGYLFGKPVPVEQFEAMLQPDRAS 814 >UniRef50_Q47ED8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47ED8_DECAR Length = 827 Score = 692 bits (1788), Expect = 0.0, Method: Composition-based stats. Identities = 101/473 (21%), Positives = 186/473 (39%), Gaps = 18/473 (3%) Query: 282 QNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNV 341 + I + V ++ + V + RA+ ++ LA D + LPN Sbjct: 348 HRDGLEAAIEDSAAPIHNRDGQVAGAVIVFHDV--SESRAMALKMAHLAQHDFLTGLPNR 405 Query: 342 RALNRAL--------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEP 393 L L R + +L + + + + G + Q Q+++ L + Sbjct: 406 ALLTERLSRAIGQARRHNKRVGMLFLDLDYFKHINDSLGHAVGDQLLQQVAERLIVCIRD 465 Query: 394 GEDVYQLSGNDLALRLNTESHQERITALDSHLKQF---RFFWDGMPMQPQIGVSYCYVRS 450 + V + G++ + L + L G + + + Sbjct: 466 TDTVCRQGGDEFVILLAEIEQARDAAPIAEKLLAAFAEPCLIAGNELHVSLSIGISIYPD 525 Query: 451 PVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFF 510 ++ +T + N + + ++ + L++AL F Sbjct: 526 DGMDADTVMKNADTA--MYHAKANGRNNYQFFTTEMNTRAVRRLFIEGNLRRALRQGEFM 583 Query: 511 LMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQF 568 L QP + + E L+R + L+ P F+P+A E GL I WV+ + Sbjct: 584 LYYQPKIDLASGMMIGSEALIRWQDPEHGLVYPKQFVPIAEESGLIVPIGSWVLREACRQ 643 Query: 569 MAENRA-KMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVK 627 + + + A ++N+S F V+ +L + + L E+TES + + + Sbjct: 644 VRAWQESGLVAVPVSVNISAVEFRHKDFLEGVALILKETGMLPSYLELELTESILMHDAE 703 Query: 628 QAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVA 687 + L+ L+ +G Q+AIDDFGTGY+S + LK + LKID SF+ +I + D IV Sbjct: 704 SSATVLEALKTMGMQLAIDDFGTGYSSLSYLKRFPINTLKIDQSFVHDIAIDPDDASIVG 763 Query: 688 SICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEI 740 ++ + + K VVAE VE EE + +L D QG+L G+P P + + Sbjct: 764 AMIGMGKNLKQRVVAEGVETEEQLAFLRTLHCDEGQGFLFGRPLPADEFARLL 816 >UniRef50_B8GLY5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GLY5_THISH Length = 1082 Score = 692 bits (1788), Expect = 0.0, Method: Composition-based stats. Identities = 107/570 (18%), Positives = 209/570 (36%), Gaps = 33/570 (5%) Query: 205 QQVDAKVTKKEFALWLLALGALLLLLCMPLNEKSTIFS--------TNYTLSLLLP--LM 254 + + + +E + M + + I S T Y+ ++ Sbjct: 510 RDITGRKRIEESLRLHAQVFDTATEGVMIADARGRILSVNRAFEQVTGYSAEEVVGRNPS 569 Query: 255 MWGAMRYGYKLISLLW-----AVVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIV 309 + + R +W + I + + IYP + T +I + F+ Sbjct: 570 ILSSGRQDKAFYRRMWDTIKGEGIWSGEIWNRRKDGEIYPEWLTISSIAGPNGEASHFVA 629 Query: 310 NYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL--------RDAPWSALCYLRI 361 + + T Q+ + I LA DP+ L N L R+ L + + Sbjct: 630 VFSDI--TAQKRSEQEIDFLANHDPLTGLANRNLFEDRLAHAISMAGRNGQHVGLLLVDL 687 Query: 362 PGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITAL 421 ++ G ++ L + + V +L G++ + L + Sbjct: 688 DRFRLINDGMGHGPGDALLRETGRRLGHCVRDSDTVARLGGDEFGIILEGLADAADAGMQ 747 Query: 422 DSHLKQF---RFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENM 478 + + G + + + + LL +T +++ N Sbjct: 748 AERILEAMRAPLRLGGQELFCTVSIGIAVFPADGTDAATLLRHADTA--MALAKREGRNN 805 Query: 479 QRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDVYH--EILLRMKGEND 536 + L + ++ + L+ ALE + L QPI E L+R + Sbjct: 806 FQFYTHALTEAVFSRLNIETGLRHALERDELRLHYQPILDAASGRIAAMESLMRWQHPER 865 Query: 537 ELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAEN-RAKMPAHRFAINLSPTSVCQARF 595 L+SP F+PVA + L ++ W + + A + ++N+ Q F Sbjct: 866 GLVSPGVFIPVAEQSDLILALGRWALVSACAQVRAWSDAGLEPVPVSVNIPACHFRQPGF 925 Query: 596 PVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASY 655 EV ++ + ++ LI E+TES + V A+ ++ L++ G +AIDDFGTGY+S Sbjct: 926 VEEVLGVVRETGVQPQSLIIELTESALMEPVSLAEERIRRLRDTGVVVAIDDFGTGYSSL 985 Query: 656 ARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVL 715 L+ + + LK+D SF+ + + I ++ ++ + VVAE VE + + + Sbjct: 986 GYLQRFHVNYLKVDRSFVSGLPGDENARAITEAVIGVSHSLGLQVVAEGVETQAQLDHLR 1045 Query: 716 SLGIDYMQGYLIGKPQPLIDTLNEIEPIRE 745 + G D +QGYL G+P + E Sbjct: 1046 ATGCDKVQGYLTGRPVTAEVAATLLPGAGE 1075 >UniRef50_B7KEH4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KEH4_CYAP7 Length = 1027 Score = 692 bits (1787), Expect = 0.0, Method: Composition-based stats. Identities = 105/530 (19%), Positives = 207/530 (39%), Gaps = 24/530 (4%) Query: 232 MPLNEKSTIFSTNYTLSLLLPL--MMWGAMRYGYKLISLLWAVV-----LMISIHSYQNY 284 + + T YT ++ + + + LW + H+ + Sbjct: 495 IEYVNRKFEKLTGYTRQEVIGKNPRLLKSGKISQDQYKQLWRTLTSGQEWHGEFHNQKKN 554 Query: 285 IPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRAL 344 ++ + I + ++ FI + TR++A R + A D + LPN Sbjct: 555 GELFWESASISPIKNEEGVITHFIAIKEDI--TRRKAQDRILAYQANYDALTGLPNRFLA 612 Query: 345 NRAL--------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGED 396 L R A+ ++ + + + G ++++ L L + Sbjct: 613 IDRLKLAILQAERQEQRVAVMFIDLDRFKNVNDTLGHEYGDLLLKQVAERLKKCLRKSDT 672 Query: 397 VYQLSGNDLALRLNTESHQERITALDSHLK---QFRFFWDGMPMQPQIGVSYCYVRSPVN 453 V +L G++ + + + + + F + + Sbjct: 673 VARLGGDEFLIIIPNLKQPSHCKGIAKKILSSLEKPFNLLEEEAFISASIGITLYPDDGD 732 Query: 454 HIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMA 513 + L+ +T + + N + + + + ++ + N L QAL+ +L+ Sbjct: 733 DVNALMRNADTA--MYLGKRGGRNDFKFYTLGMNETNRTRIIIENLLHQALKKKEIYLVY 790 Query: 514 QPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAE 571 QPI ++ + + E LLR +SPD F+P+A E GL + + WVI Q + + Sbjct: 791 QPIMELKTEKVIGAEALLRWNNPQLGQVSPDQFIPIAEETGLINQLGAWVISQACQEVVQ 850 Query: 572 NRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQI 631 +A+ A+NLSP ++ ++ +A I L E+TE L + +Q Sbjct: 851 WKAQGTPISVAVNLSPRQFRDSKLLKIITDAIAVNGITNHDLELEITEKLLLEDSPGSQG 910 Query: 632 TLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICH 691 L L ++ ++IDDFGTGY++ + L + LKID SFI ++ + +V +I Sbjct: 911 ILSQLHQMNFPLSIDDFGTGYSALSYLIKFPFNRLKIDRSFITDMTHSQKAMGLVKTIIA 970 Query: 692 LARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIE 741 ++ + V+AE VE E ++ S G DY QGY +P + ++ Sbjct: 971 MSHGLNLQVIAEGVETSEQLNSLKSQGCDYAQGYFFSRPLTGEEFRYYLQ 1020 >UniRef50_B7GKR7 Multidomain signal transduction protein (Contains PAS, GGDEF and EAL domains) n=2 Tax=Bacillaceae RepID=B7GKR7_ANOFW Length = 594 Score = 692 bits (1786), Expect = 0.0, Method: Composition-based stats. Identities = 117/534 (21%), Positives = 221/534 (41%), Gaps = 25/534 (4%) Query: 232 MPLNEKSTIFSTNYTLSLLLPLM--MWGAMRYGYKLISLLWA-----VVLMISIHSYQNY 284 + L + T YT +L + + + K +W V I + + Sbjct: 61 ILLANPAFETVTGYTQEEVLGKKPNILRSGLHDRKFYENMWETIRDHGVWKGEIWNKRKN 120 Query: 285 IPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRAL 344 ++ + T + + ++ + V T+ + + ++ RL+ D + ++PN + Sbjct: 121 GELFVEWLTIKAVYDVAGNPTHYVAIFSDV--TQHKRTMEQLARLSNYDLLTNVPNRQLF 178 Query: 345 NRALRD--------APWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGED 396 + L+ A+ +L + + + G QK+++ L LL + Sbjct: 179 TKRLQHLLDTARRYNQQLAILFLDLDRFKYINDELGHYSGDILLQKVANRLKKLLRTKDT 238 Query: 397 VYQLSGNDLALRLNTESHQERITALDSHL---KQFRFFWDGMPMQPQIGVSYCYVRSPVN 453 + ++ G++ + L + ++ + Q F + + + + Sbjct: 239 LARIGGDEFVVILPKLKDIQEAVSIAEQIIESLQAPFLLHHKDIYISASIGISVYPNDGD 298 Query: 454 HIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMA 513 +LL + + + N L + + V + N L++A+E N F+ Sbjct: 299 DGEMLLRRADRA--MQKAKESGRNRFELYTAKLDYQS-EVVTLENYLRKAIERNELFVCY 355 Query: 514 QPITGMRGDVY--HEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAE 571 QPI ++ E L+R K N +SP F+P+A E GL + W+ E + Sbjct: 356 QPIVNIKTKKIEALEALMRWKQPNIGFVSPAQFIPLAEETGLIVPMTKWLFEQACVHIKA 415 Query: 572 NRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQI 631 P + IN+S Q F ++S ++ K+ + E+TES + N +++ Sbjct: 416 IHQFAPHVKIGINISAVHFQQDDFVQQLSTIVKKHDVHPRFFKLELTESTIMPNAEESVQ 475 Query: 632 TLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICH 691 L L++ G ++AIDDFGTG++S + L D+LKID SFIR + S D IV++I Sbjct: 476 KLVQLKQCGFKLAIDDFGTGFSSLSYLHRFPIDILKIDQSFIRRLSLYSDDATIVSTIIM 535 Query: 692 LARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIRE 745 +A + VVAE VE E+ E + D QGY I KP P+ + ++ E Sbjct: 536 MAHHLHLSVVAEGVETEQQYEFLNKQQCDMAQGYYIAKPMPIDEVQQFVQEWDE 589 >UniRef50_C6P3H7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P3H7_9PROT Length = 912 Score = 692 bits (1786), Expect = 0.0, Method: Composition-based stats. Identities = 118/532 (22%), Positives = 212/532 (39%), Gaps = 26/532 (4%) Query: 231 CMPLNEKSTIFSTNYTLSLLLPLM--MWGAMRYGYKLISLLWAVV-----LMISIHSYQN 283 + + T Y + ++ + + R+ +W + + I + Sbjct: 376 LIMAINPAFTRITGYAMEDVIGKNPGILKSGRHDMDFYQAMWNEILGTGKWIGEIWDRRK 435 Query: 284 YIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRA 343 +YP + T T+ + V I + + ++++ I R A D + LPN R Sbjct: 436 SGEVYPKWLTINTVFNDDGKVHHRIALFTDI--SQKKESEELIWRQANFDHLTGLPNWRM 493 Query: 344 LNRALRDAPW--------SALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGE 395 + L A+ +L + + + G ++ + LS + + Sbjct: 494 FHDRLEQEIKKSRRVELPLAVVFLDLDHFKEVNDTMGHATGDLLLKEAALRLSSCVRESD 553 Query: 396 DVYQLSGNDLALRLNTESHQERITALDSHLK---QFRFFWDGMPMQPQIGVSYCYVRSPV 452 V +L G++ AL L S Q+ I ++ + F + + S Sbjct: 554 TVARLGGDEFALLLGELSDQDSIERVNECILNKFSAPFQLGNELAYISVSIGVTIYPSDA 613 Query: 453 NHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLM 512 I LL + + N+ N +Q ++++++ N L +AL + F L+ Sbjct: 614 TEIEALLRNADQA--MYAAKNSGRNRSCYYTQAMQSVAQNRMSLSNDLHKALAQDQFRLV 671 Query: 513 AQPITGMRGDVY--HEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMA 570 QPI + E L+R + N L+SP F+P+A + GL I WV + Sbjct: 672 YQPIVELETGSIHKAEALIRWQHPNRGLVSPADFIPIAEQSGLIIQIGDWVFRQAANQVK 731 Query: 571 ENR-AKMPAHRFAINLSPTSVC-QARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQ 628 R A + +IN SP + + + L + + E+TES + Sbjct: 732 HWRGAYGKDIQISINKSPVQFKSDSNTHLAWFEHLKELDLSGGCFAIEITESLLMDASDT 791 Query: 629 AQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVAS 688 L +G Q+A+DDFGTGY+S + LK + D +KID SF+RN+ +S D + + Sbjct: 792 IVSKLMAFGNIGMQVALDDFGTGYSSLSYLKKFDIDYIKIDQSFVRNLAPDSSDLALCEA 851 Query: 689 ICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEI 740 + +A + V+AE VE E R+ + + G DY QGYL +P D + Sbjct: 852 MIMMAHKLGIKVIAEGVETSEQRDLLRTAGCDYGQGYLFSRPLSTEDFEGLV 903 >UniRef50_Q1PY13 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PY13_9BACT Length = 857 Score = 691 bits (1785), Expect = 0.0, Method: Composition-based stats. Identities = 111/493 (22%), Positives = 197/493 (39%), Gaps = 23/493 (4%) Query: 269 LWAVVLMISIH-----SYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVV 323 LW + S + + ++ + I S+ + ++ + T + Sbjct: 363 LWKAITSKGEWKEAFSSRKKHGELFWTSLSLSAIKSNEGFISHYLAIMEDI--TEHKQAE 420 Query: 324 RRIQRLAYVDPVVHLPNVRALNRAL--------RDAPWSALCYLRIPGMEMLVKNYGIML 375 RI LAY D + LPN + L R A+ ++ I + + G Sbjct: 421 ERIHYLAYYDSLTALPNRELFHDRLNMAIIHAHRKQQMLAVAFIDIDRFKKVNDTLGHST 480 Query: 376 RIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLKQ---FRFFW 432 + + ++ L + + V + G++ L L S E + + + Sbjct: 481 GDRLLKIIADRLKSCIREEDTVSRQGGDEFVLLLTEISRMEDANDVTQRILKKLKEPVII 540 Query: 433 DGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKD 492 D + + LL ++ + I + + + +Q + + Sbjct: 541 DDHDLCISASIGIALYPGDGTTAEALLKNADSA--MYISKESGRDNYHFYSSTVQEKAYE 598 Query: 493 KVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHE 550 ++ L++ALE+ L QP + V E LLR K LISP F+P+A + Sbjct: 599 QLLEEMYLRRALENRELVLYYQPQVNIATGRLVGMEALLRWKHPKKGLISPAEFIPLAED 658 Query: 551 FGLSSSIDMWVIEHTLQF-MAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIE 609 G ID WV+ + MA RA +P+ A+N+S + + V+ +L ++ Sbjct: 659 TGQIVPIDFWVLHTACKQNMAWQRAGLPSVPIAVNISGHTFGRENLIDFVNNVLHDTRMS 718 Query: 610 AWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKID 669 L E+TE A+ N++ L L+ LG QI IDDFGTG++S + L LKI Sbjct: 719 PDALDLEITEGIAIQNLQTTIYKLNKLKSLGIQITIDDFGTGFSSLSYLSKFPIQKLKIG 778 Query: 670 GSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGK 729 +FI N+ + + IV ++ +A+ ++ V+AE VE +E E + L D QGYL K Sbjct: 779 MTFIHNLHKDPTNSAIVKAVIAMAKSLQLTVIAEGVETDEQFEFLQGLQCDEFQGYLCSK 838 Query: 730 PQPLIDTLNEIEP 742 + + Sbjct: 839 AVTSEEMGRFLAK 851 >UniRef50_C9YA12 Uncharacterized signaling protein PA1727 n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YA12_9BURK Length = 786 Score = 691 bits (1784), Expect = 0.0, Method: Composition-based stats. Identities = 120/540 (22%), Positives = 205/540 (37%), Gaps = 35/540 (6%) Query: 236 EKSTIFSTNYTLSLLL---PLMMWGAMRYGYKLISLL-----WAVVLMISIHSYQNYIPI 287 + T Y + P + G+ + ++ + + Sbjct: 243 NSAFQRVTGYLPEEAIGKAPRDLMGSGIQTQEFYEVMNESIRSNGSWQGEVWDRRKNGET 302 Query: 288 YPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRA 347 YP +TT + S S V ++ N + ++A I+ L Y D + LPN R L Sbjct: 303 YPAWTTITAVRSESGDVTHYVANLSD--FSARKAAENEIKTLVYFDSLTMLPNRRMLMGR 360 Query: 348 LRD--------APWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQ 399 L AL ++ + + L G Q++++ L + + V + Sbjct: 361 LETAMHAALSTGHLGALLFVDLDDFKTLNDTLGHHQGDILLQQVANRLQSCVREADTVAR 420 Query: 400 LSGNDLALRLNTES-----HQERITALDSHLKQF---RFFWDGMPMQPQIGVSYCYVRSP 451 L G++ + L S + A+ + Q + + V Sbjct: 421 LGGDEFVVMLEGLSKDVAEASTQAEAVAGKVMQALNQPYDLGTLTRSSTPSVGITVFGKQ 480 Query: 452 VNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFL 511 + L + + A N R Q + + + L+ ALE F L Sbjct: 481 QESLDEPLKRADLA--MYQAKAAGRNTSRLFDPKTQAAVTLRADLEAALRTALEEEQFVL 538 Query: 512 MAQPITGMRGDV-YHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMA 570 QP V E L+R + L+ P F+ VA + G+ I WV+ + +A Sbjct: 539 YLQPQISEDVRVTGAEALIRWQHPTRGLVMPGEFIAVAEDCGMIVPIGNWVLNTACKQLA 598 Query: 571 EN--RAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQ 628 + A+N+S Q F +V L+++ +A L E+TES + NV Sbjct: 599 LWATQPAFAHMTIAVNVSAKQFHQHDFVEQVLDALSRHGAQASGLKIEITESMLIANVDD 658 Query: 629 AQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVAS 688 + ++ LQ G A+DDFGTGY+S LK + D+LKID SF+R+++ ++ D I Sbjct: 659 VIVRMEELQHHGVGFAMDDFGTGYSSLTYLKRLPLDVLKIDQSFVRDVLVDTNDAAIANM 718 Query: 689 ICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLN----EIEPIR 744 I LA + V+AE VE E + + G QGYL +P P+ + P++ Sbjct: 719 IVALANSMGLSVIAEGVETVEQMQYLARHGCHAYQGYLFSRPVPVERFETSLADFLRPLQ 778 >UniRef50_C7RQ11 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RQ11_9PROT Length = 978 Score = 691 bits (1784), Expect = 0.0, Method: Composition-based stats. Identities = 120/535 (22%), Positives = 202/535 (37%), Gaps = 26/535 (4%) Query: 232 MPLNEKSTIFSTNYTLSLLLP--LMMWGAMRYGYKLISLLWAVV-----LMISIHSYQNY 284 + + T YT + + + + R+ +WA + + + + Sbjct: 303 IISVNPAFSEMTGYTAAEAIGRNPRLLQSGRHDRAFYQAMWASLTQAGHWQGELWNRRAD 362 Query: 285 IPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNV--- 341 IYP + T + ++ + + ++ + ++ LA+ DP+ LPN Sbjct: 363 GEIYPQWATLSVVKDEHGQPTHYLAVFTDL--SKLKHREEELEHLAHYDPLTDLPNRLLL 420 Query: 342 -----RALNRALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGED 396 AL RA R SA+ + + + + + G L + ++ L L + Sbjct: 421 RSLLQHALERAQRQGGKSAVLVINLDQFKNVNDSLGHALGDELLLGVTARLKARLRHEDV 480 Query: 397 VYQLSGNDLALRLNTESHQERITALDSHLKQF---RFFW-DGMPMQPQIGVSYCYVRSPV 452 V +L ++ L E ++ L F DG + + Sbjct: 481 VGRLGADEFVAILEASQDAENAGSIAGDLLAALAPPFVLADGHETYARASIGISVFPQDG 540 Query: 453 NHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLM 512 LL + + N L ++ M L++AL L Sbjct: 541 KGANDLLRSADVA--MHRAKQRGGNQYAFYTGELGHGALQRLEMETALRRALIQGELVLH 598 Query: 513 AQPITGMRGDV--YHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMA 570 QP + V E LLR + L+ P F+P+A E GL I WVI T + + Sbjct: 599 YQPKLDLASGVIVGGEALLRWQRPGFGLVPPYRFIPLAEETGLIVPIGAWVINETCRQIR 658 Query: 571 EN-RAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQA 629 A P+ A+N+S ++ L K+ ++ L E+TES + +QA Sbjct: 659 AWAEAGQPSVMVAVNVSARQFAGGELEAVLATALRKHAVDPRMLGLELTESMLMAAPEQA 718 Query: 630 QITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASI 689 L L+ +G +A+DDFGTGY+S + L D LKID SFI +IVS+ I ++ Sbjct: 719 TERLDALRRVGVAVALDDFGTGYSSLSYLSRFPVDELKIDRSFITHIVSDPKAANIATAV 778 Query: 690 CHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIR 744 LA + VVAE VE E + D +QGYL P P + + + Sbjct: 779 IALAHRMALKVVAEGVETETQLSYLRKNRCDQIQGYLFSAPVPADEFATLVSQGK 833 >UniRef50_Q47X88 Sensory box sensor/GGDEF/EAL domain protein n=2 Tax=Colwellia psychrerythraea 34H RepID=Q47X88_COLP3 Length = 1086 Score = 691 bits (1784), Expect = 0.0, Method: Composition-based stats. Identities = 120/533 (22%), Positives = 218/533 (40%), Gaps = 29/533 (5%) Query: 231 CMPLNEKSTIFSTNYTLSLLLPLM--MWGAMRYGYKLISLLWA-----VVLMISIHSYQN 283 + + T Y+ S L+ ++ + + + L+W I + + Sbjct: 543 EIIAINPALSEITGYSSSELIGKNPNVFSSGKQNPEFYQLMWEEIKLTGTWQGEIWNTKK 602 Query: 284 YIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRA 343 YP + + TI VF I + + T ++ I R A D + +LPN Sbjct: 603 NGKEYPEWLSISTIYDDYGNVFRRIALFSDI--TEKKKKDALILRQAKYDSLTNLPNRIM 660 Query: 344 LNRAL--------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGE 395 L R AL ++ + + + G + + ++ + + Sbjct: 661 FIDRLEQEIKVSHRKNQKFALIFIDLDNFKKINDTRGHVYGDALLIEAGKRITHCIREVD 720 Query: 396 DVYQLSGNDLALRLNTESHQERITALDSHLKQ---FRFFWDGMPMQPQIGVSYCYVRSPV 452 V +L G++ + L+ + + ++ + Q FF M + + Sbjct: 721 TVARLGGDEFTILLSDIADIHNVESICQKVLQTLSEPFFISKMYTYISASLGVTIYPNDA 780 Query: 453 NHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLM 512 + LL + + + N N +Q E D + ++N L++A+ N + Sbjct: 781 SSTLELLKNADQA--MYLAKNLGRNRFCYFTASMQEEALDHLELINDLRKAISLNQLEVF 838 Query: 513 AQPITGMRGDVY--HEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMA 570 QPI ++ V E LLR K ++SP F+P+A E GL I WV + T+Q + Sbjct: 839 YQPIVELQTGVIRKAEALLRWKHPVRGMVSPAEFIPLAEESGLIIEIGDWVFKQTVQHIN 898 Query: 571 ENRAKMP-AHRFAINLSPTSVCQARFPVEVS--QLLAKYQIEAWQLIFEVTESNALTNVK 627 + ++ + ++N SP ++ ++ LA+ Q+ ++ E+TE + N Sbjct: 899 TCKDQLGLDIQISVNKSPVQFRES--IDQLDWLAYLAENQLPGENIVIEITEGLLMNNNT 956 Query: 628 QAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVA 687 L + G +++DDFGTGY+S + LK D LKID SF RNI S D + Sbjct: 957 STMERLSKFRSAGIGLSMDDFGTGYSSLSYLKKFALDYLKIDQSFTRNIAPGSEDMILSE 1016 Query: 688 SICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEI 740 +I +A+ + V+AE +E +E E ++ G DY QGY +P P D L + Sbjct: 1017 AIITMAQKLGLKVIAEGIETKEQMELLIGAGCDYGQGYYFSRPIPAEDFLQLL 1069 >UniRef50_C6NZZ7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Bacteria RepID=C6NZZ7_9PROT Length = 1152 Score = 690 bits (1782), Expect = 0.0, Method: Composition-based stats. Identities = 121/484 (25%), Positives = 204/484 (42%), Gaps = 23/484 (4%) Query: 283 NYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVR 342 + + + M + T ++ I+ LA+ DP+ HLPN R Sbjct: 667 KSGTLLWEEVNGVPFFDEHGELMGLRGTGMNI--TDRKRAEEEIKSLAFYDPLTHLPNRR 724 Query: 343 ALNRALRD--------APWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPG 394 L L+ AL ++ + + L G + Q+++ L+ + G Sbjct: 725 LLVDRLQHALASSTRSGREGALLFIDLDNFKTLNDTLGHDIGDLLLQQVALRLASCVREG 784 Query: 395 EDVYQLSGNDLALRLNTESHQ--ERITA---LDSHLK---QFRFFWDGMPMQPQIGVSYC 446 + V +L G++ + L S Q E + + + + + Sbjct: 785 DTVARLGGDEFVVMLEELSEQTLEAAAQTESIGEKILLTLNQPYLLAAHEYRNSPSIGAT 844 Query: 447 YVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEH 506 + I LL + + + A N R +Q + + + L +ALE+ Sbjct: 845 LFGNKPQSIEELLKQADIA--MYQAKKAGRNTLRFFDPQMQETVIARALLERELSKALEN 902 Query: 507 NHFFLMAQPIT-GMRGDVYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHT 565 + F L Q + E L+R LI P+ F+P+A E GL I +WV++ Sbjct: 903 DQFQLYYQIQMTDLNEPFGAEALIRWIHPERGLIPPNHFIPLAEEVGLILPIGLWVLDTA 962 Query: 566 LQFMAENR--AKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNAL 623 + A A+N+S S Q F ++ +L ++ I +L E+TES L Sbjct: 963 CNQIKIWEKNASTRELVLAVNVSARSFFQDDFVTQIQTVLQRHAINPKRLKLEITESMML 1022 Query: 624 TNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDY 683 +++Q + L++LG Q A+DDFGTGY+S LK + D LKID SF+R+I ++S D Sbjct: 1023 NSIEQTIEKMNALKKLGVQFAMDDFGTGYSSLQYLKRLPLDQLKIDQSFVRDIATDSSDK 1082 Query: 684 QIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPI 743 IV +I +A + V+AE VE E+ R+ ++ G QGYL GKP P+ ++P Sbjct: 1083 AIVTTIVAMAHSLNLDVIAEGVETEQQRQLLIESGCSQYQGYLFGKPAPIRQFEESLKPG 1142 Query: 744 RESA 747 A Sbjct: 1143 LRQA 1146 >UniRef50_C5V2W0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V2W0_9PROT Length = 1275 Score = 690 bits (1782), Expect = 0.0, Method: Composition-based stats. Identities = 121/534 (22%), Positives = 199/534 (37%), Gaps = 27/534 (5%) Query: 236 EKSTIFSTNYTLSLLLPL--MMWGAMRYGYKLISLLW-----AVVLMISIHSYQNYIPIY 288 ++ T YT ++ + + + + LW I + + IY Sbjct: 614 NQAFCEITGYTSEEVIGKNPRILKSEKQDHDFFRSLWRSLELQGSWQGEIWNRRKNGEIY 673 Query: 289 PGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL 348 P +++ + +S V ++ + +L Q+ + + L + D + LPN L + Sbjct: 674 PEWSSINAVKDASGRVVNYFAVFSDLL---QKKALAELDHLKHYDALTDLPNRALLEDRI 730 Query: 349 RDAPWSA--------LCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQL 400 + A + +L + + Q + L + +L Sbjct: 731 ESSITHARQYERFIGVIFLNLDHFHTVNDMLSHAGGDQVLIATAKRLMDAAPAQASISRL 790 Query: 401 SGNDLALRLNTESHQERITALDSHLKQ---FRFFWDGMPMQPQIGVSYCYVRSPVNHIYL 457 S + + L + E I + Q +Q + N Sbjct: 791 SADTFVIALPDLNTSEEINRTAELIAQKIYQPLTVADQSVQLSARMGISVYPIDGNDATT 850 Query: 458 LLGELNTVAELSIVTNAP-ENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPI 516 L+ + A L+ N R + + + M L+ A+ N L QP Sbjct: 851 LMKHAD--AALADAKQCGVRNSFRFYSSSMNEHAHKLLTMGAELRNAISQNRLVLHYQPQ 908 Query: 517 TGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENR- 573 + + E L+R+ +ISP F+ VA E GL + WVI + M + Sbjct: 909 VDIITGQIIGAEALIRINHPERGIISPGEFISVAEETGLIIPMGTWVIREACRQMQQWHL 968 Query: 574 AKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITL 633 K AINLSP + Q+ P VS L + A L E TES + NV++ + Sbjct: 969 DKNIELTIAINLSPLQLHQSDLPEIVSLALHDSGLNARYLELEFTESAIMKNVRETVAIM 1028 Query: 634 QHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLA 693 + +G ++IDDFGTGY+S + LK D LKID SF+ NI + D IV +I L Sbjct: 1029 NKFKAMGLHLSIDDFGTGYSSLSYLKQFPVDKLKIDQSFVSNITQDPNDAAIVQAIIALG 1088 Query: 694 RMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIRESA 747 R M +AE VE E + S+ MQGYL P P + + + A Sbjct: 1089 RTLGMTTIAEGVETEAQLGYLRSVNCKEMQGYLYSAPLPAEEFAALLVRGKMMA 1142 >UniRef50_Q47HF3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=Q47HF3_DECAR Length = 994 Score = 690 bits (1781), Expect = 0.0, Method: Composition-based stats. Identities = 113/526 (21%), Positives = 210/526 (39%), Gaps = 25/526 (4%) Query: 236 EKSTIFSTNYTLSLLLPL--MMWGAMRYGYKLISLLWAVV-----LMISIHSYQNYIPIY 288 + T Y ++ + + + + +W + I + + Sbjct: 322 NDAFSTITGYQADEIVGQNPRLLKSGVHSPAFYAEIWKTIDQYGNWQGEITNRHKDGSLV 381 Query: 289 PGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL 348 + + ++ ++ +I + + + ++A RIQ L+ D + LPN + L Sbjct: 382 TEWLSISSLRDTTGTASHYIGIFSDL--SERQAAAERIQYLSSYDTLTELPNRHLFDDRL 439 Query: 349 --------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQL 400 R +AL L + ++ G + +++ L + G+ V + Sbjct: 440 NQALLTARRFERGTALILLDLNRFRLINDTLGPPAGDEILVEVTRRLKLQVREGDTVGRR 499 Query: 401 SGNDLALRLNTESHQERITALDSHLKQ---FRFFWDGMPMQPQIGVSYCYVRSPVNHIYL 457 +GN+ + SH+ AL + F G + + + Sbjct: 500 AGNEFGFVMANLSHERDALALAQRMLDAISVPFSVAGQSVAITASIGISVFPKNGENGEA 559 Query: 458 LLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPIT 517 +L + A L + N + + + ++++ + L+ AL + F + QP Sbjct: 560 MLRSAD--AALLRAKQSGRNTFSFYSPEMDADAARRLSIESALRDALARDEFCVHYQPQV 617 Query: 518 GMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRA- 574 + + E LLR ISP F+P+A E GL I WV+ Sbjct: 618 SLDSGHMIGMEALLRWNSALLGPISPVEFIPIAEETGLIMQIGDWVLRTACHQTKAWLDL 677 Query: 575 KMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQ 634 + A+NLSP QA P +V+ LA+ + A L E+TES + ++ A Sbjct: 678 GLLPLHVAVNLSPRQFRQADLPAQVAHALAESGLPAGALELEITESAFIDDIDDAVAMCS 737 Query: 635 HLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLAR 694 L+ LG ++++DDFGTGY+S A + D +KID SF+R+IV+N ++ I ++ + R Sbjct: 738 KLKSLGIKLSLDDFGTGYSSLAYVSRFPFDKIKIDQSFVRDIVNNPVNAAIASAAIVMGR 797 Query: 695 MKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEI 740 + V+AE VE E + S D +QGYL +P P + + Sbjct: 798 SLNLSVLAEGVETEAQAAFLRSRRCDAIQGYLFSRPLPPEEFAPLL 843 >UniRef50_C6XCZ6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XCZ6_METSD Length = 869 Score = 690 bits (1781), Expect = 0.0, Method: Composition-based stats. Identities = 119/533 (22%), Positives = 212/533 (39%), Gaps = 26/533 (4%) Query: 232 MPLNEKSTIFSTNYTLSLLLP--LMMWGAMRYGYKLISLLWA-----VVLMISIHSYQNY 284 + + T YT ++ + + + K +W + + + Sbjct: 341 ILSVNPAFTEMTGYTAQEVVGKTPKILASGKQDRKFYEEMWHLLDSNGKWQGEVWNRRKN 400 Query: 285 IPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRAL 344 Y + T TI + V + + + T+ + I R A D + LPN R L Sbjct: 401 GESYAEWLTIDTIYNEHGEVIRRVALFSDI--TKNKQNQEVIWRQANFDQLTGLPNRRML 458 Query: 345 NRAL--------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGED 396 + L R+ A+ +L + + + YG ++ Q Q+ +H L + + Sbjct: 459 HDRLNQEILKADRNHQMLAVLFLDLDRFKEVNDTYGHLMGDQLLQESAHRLLHSVRECDT 518 Query: 397 VYQLSGNDLALRLNTESHQERITALDSHLK---QFRFFWDGMPMQPQIGVSYCYVRSPVN 453 V +L G++ + L+ ++ + + + F D + + N Sbjct: 519 VARLGGDEFVVILSGLQDKDVVQDIAQSILKKFDTPFQLDNDLTHVSVSIGITIYPEDGN 578 Query: 454 HIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMA 513 +L + + + N N +Q ++++ + N L AL F L Sbjct: 579 AGEVLFKNADQA--MYVAKNNGRNRYSYFTASMQAHAQNRMRLSNDLHLALPGQQFELYY 636 Query: 514 QPITGMRGD-VY-HEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAE 571 QPI + V+ E LLR + +I PD+F+P+A E GL I WV + + Sbjct: 637 QPIVELATGQVHKAEALLRWQHPTRGMIPPDNFIPLAEETGLIVDIGNWVFYEAARQVKR 696 Query: 572 NRA-KMPAHRFAINLSPTSVCQARFP-VEVSQLLAKYQIEAWQLIFEVTESNALTNVKQA 629 ++ + + +IN SP L + ++ E+TE + + Sbjct: 697 LQSLHHASFQISINKSPVQFHNETHGHEAWISFLLMNDLPRQSIVVEITEGLLMHTDESI 756 Query: 630 QITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASI 689 L ++ G Q+A+DDFGTGY+S + LK + D LKID F+RN+ NS D + +I Sbjct: 757 SAQLLGFRDAGVQVALDDFGTGYSSLSYLKKFDIDYLKIDRIFVRNLSRNSSDMALCEAI 816 Query: 690 CHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEP 742 +A + V+AE +E EE RE + +G D+ QGYL P P + P Sbjct: 817 VMMAHKLDIKVIAEGIETEEQRELLQQIGCDFGQGYLFSPPLPAPAFEAYLRP 869 >UniRef50_Q479L8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q479L8_DECAR Length = 582 Score = 689 bits (1779), Expect = 0.0, Method: Composition-based stats. Identities = 119/544 (21%), Positives = 214/544 (39%), Gaps = 34/544 (6%) Query: 231 CMPLNEKSTIFSTNYTLSLLLP--LMMWGAMRYGYKLISLLWAVV-----LMISIHSYQN 283 + + + Y LL + + + + +W + I Sbjct: 43 LIVAANGAFCQLSGYASDELLGKDPRVLASDNSTAEHYASIWNALATKDFWEGEIWDKNK 102 Query: 284 YIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRA 343 Y + + + + + + N+ + A+ + R+ LAY DP+ +LPN A Sbjct: 103 NGERYNRWLKIAVLRDAEGQIENHVANFSEMEAS--KEYADRLAYLAYHDPLTNLPNRLA 160 Query: 344 LNRAL--------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGE 395 L RD AL + + + + G + + QK++ L + + Sbjct: 161 FESQLAQALRGCERDNRQLALMLIDLDNFKNINDTLGHHVGDELLQKVALRLRESVRSSD 220 Query: 396 DVYQLSGNDLALRLNTESHQERITALDSHLKQF---RFFWDGMPMQPQIGVSYCYVRSPV 452 V ++ G++ + L + + ++Q + + + Sbjct: 221 LVARIGGDEFVIVLPEIESPLTAARVANKVQQNMADSYRIADHALYATPSIGISLFPIDG 280 Query: 453 NHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALE-----HN 507 + LL +T + +A N + + +++ M N L+QA+ + Sbjct: 281 SDANTLLRNADTA--MYHAKDAGRNNHQFYTARMNEAAGERLHMENELRQAISAISPGDS 338 Query: 508 HFFLMAQPITGMRGDV--YHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHT 565 F L QP E LLR +SP F+ +A E GL + WVI T Sbjct: 339 EFSLHFQPQVQTATGQVFGLEALLRWNNPIFGQVSPMRFIAIAEETGLIQPLGDWVIWET 398 Query: 566 LQ---FMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNA 622 + M ++ + R AIN+S + + V L+ Y + + E+TES A Sbjct: 399 CRLIRQMKQH--GIEDIRIAINISAQQLRHENLLLLVRGALSCYDLRPEDIELEITESTA 456 Query: 623 LTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLD 682 + N + L L +G +AIDDFGTGY+S A LK++ LK+D SF+++I ++ D Sbjct: 457 MQNPETTLSILDQLAAMGIVLAIDDFGTGYSSLAYLKHLPIQRLKLDRSFVKDIEIDAND 516 Query: 683 YQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEP 742 I + L + +VAE VE E R + SLG D +QGYL KP P +T+ ++ Sbjct: 517 AAICTATIALGHSLGLELVAEGVETEAQRAFLASLGCDTLQGYLYSKPMPFEETIAYLKA 576 Query: 743 IRES 746 + + Sbjct: 577 HQAA 580 >UniRef50_B8KF61 Ggef/eal/pas/pac-domain containing protein n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KF61_9GAMM Length = 810 Score = 689 bits (1778), Expect = 0.0, Method: Composition-based stats. Identities = 118/537 (21%), Positives = 213/537 (39%), Gaps = 28/537 (5%) Query: 231 CMPLNEKSTIFSTNYT--LSLLLPLMMWGAMRYGYKLISLLW-----AVVLMISIHSYQN 283 + + T Y+ ++ + + R+ + +W I + + Sbjct: 277 LIRDVNAAFSQITGYSRDEAIGQATSLLRSGRHDAEFYKKMWHALKETGTWRGEIWNRRK 336 Query: 284 YIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRA 343 ++P T I F+ + + T+ + ++Q+LA+ DP+ LPN Sbjct: 337 SGAVFPELLTISKI---DGQNSGFVAIFTDI--TQLKETEEQLQKLAHYDPLTELPNRYL 391 Query: 344 LNRAL--------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGE 395 +N L R + A+ +L I + + + G + + ++ L LL + Sbjct: 392 INERLQQSIRRAQRRSERLAVFFLDIDSFKNINDSLGHLAGDKLLAMTANRLRELLRDDD 451 Query: 396 DVYQLSGNDLALRLNTESHQERITALDSHL---KQFRFFWDGMPMQPQIGVSYCYVRSPV 452 V ++ G++ + L + + T + + + +G + V Sbjct: 452 TVGRIGGDEFLMLLEDINSPDVATNIAEKIIGALRKPTILEGRSVSVSASVGISIYPDDG 511 Query: 453 NHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLM 512 L+ + A + N R + L R V + + L++A N F L Sbjct: 512 QTAETLMSNAD--AAMYSAKEQGRNTFRFYSENLTRAAFQNVLIDSALREAKSRNEFRLA 569 Query: 513 AQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMA 570 QP + + + E+LLR +SP F+P A GL I WV+E Sbjct: 570 FQPQIDIVTNSLLGLEVLLRWHHPTLGTVSPAQFIPQAERTGLIRDIGQWVLEQACLQGN 629 Query: 571 ENRA-KMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQA 629 + A +P R A+N+S F +V Q+L +L E+TES + + +Q Sbjct: 630 KWLAEGLPFGRLAVNVSAPQFRAEDFVDQVRQVLEYANFPPNRLELELTESVLVQDTEQL 689 Query: 630 QITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASI 689 + L+ +G Q AIDDFGTGY+S + LK + D LK+D SF+ NI ++ D I ++ Sbjct: 690 IGNMDELRAMGIQFAIDDFGTGYSSLSYLKKMPIDRLKLDKSFVDNISTDDNDRIIAEAV 749 Query: 690 CHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIRES 746 L + + V+AE +E EE A+ +G QG+L G P + + Sbjct: 750 VALGQAMGLEVIAEGIEYEEQARALRDIGCTQFQGFLYGMPMYTSRIEGVLRKEAQR 806 >UniRef50_Q21XK7 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q21XK7_RHOFD Length = 716 Score = 687 bits (1775), Expect = 0.0, Method: Composition-based stats. Identities = 114/527 (21%), Positives = 211/527 (40%), Gaps = 27/527 (5%) Query: 243 TNYTLSLLLP--LMMWGAMRYGYKLISLLWAVV-----LMISIHSYQNYIPIYPGYTTQL 295 T Y S +L + R K +WA + + ++P T Sbjct: 173 TGYHKSEVLSKNPKFLSSGRTTRKEYQAMWAAIRTGGFWQGEFWDRRKDGSVFPKMMTVS 232 Query: 296 TITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNR--------A 347 + + + ++ N++ V + + RRI+ LA+ D + LPN L A Sbjct: 233 VVLDRAGDIDFYLANFVDV--SHYKETERRIEHLAHHDTLTGLPNRLHLQVFLEQSILIA 290 Query: 348 LRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLAL 407 R + A+ +L + + + G + +++ L + + V +L G++ + Sbjct: 291 KRMSEQLAVVFLDLDRFKTINDTLGHPVGDDLLIQVADRLKTSVRQYDMVARLGGDEFVM 350 Query: 408 RLNTESHQERITALDSHLK---QFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNT 464 L +A+ ++ F ++ + + L+ +T Sbjct: 351 ILRGHDMPSVASAVAEKIRLHLNQPFQIGQHTLRTATSIGIALYPGNGERMDDLMKHADT 410 Query: 465 VAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGM--RGD 522 + + N + + +K+ + N L ALE+ F L QP + + Sbjct: 411 A--MYFTKSEGGNGFCFFSSDMNLHAHEKLELENLLHGALENQQFELYYQPQLSLPEQQV 468 Query: 523 VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAEN-RAKMPAHRF 581 + E+LLR ISP F+P+A +I WV+E+ + ++ R +P R Sbjct: 469 IGAEVLLRWHHPEKGFISPAVFIPLAEATNQIGAIGEWVLENACRQASQWLRDGLPLPRI 528 Query: 582 AINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGC 641 +N+S V ++LA+ + A +L E+TE+ + +A LQ L+E G Sbjct: 529 GVNVSGRQFQDKNLFTLVKRVLAETGLPADRLELEITETAVTASPDEAARLLQSLRECGI 588 Query: 642 QIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLD--YQIVASICHLARMKKML 699 +A+DDFG GY+S +L+++ D LKID +F+R+I I A+ L Sbjct: 589 MVALDDFGQGYSSLGQLRDLPIDRLKIDAAFVRDITDEPGHPGGAIAAATIGLGHNLGFS 648 Query: 700 VVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIRES 746 V+AE VE + +++ G D +QGY KP P + E+ Sbjct: 649 VIAEGVETQAQLSFLMAHGCDEVQGYYFAKPMPREQFEAFLRARMEA 695 >UniRef50_C0INC4 GGDEF family protein n=1 Tax=uncultured bacterium BLR9 RepID=C0INC4_9BACT Length = 765 Score = 687 bits (1775), Expect = 0.0, Method: Composition-based stats. Identities = 96/480 (20%), Positives = 188/480 (39%), Gaps = 18/480 (3%) Query: 282 QNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNV 341 + P ++ I + + V T RA+ ++ LA D + LPN Sbjct: 288 RRDGSELPIDESRAPILDRQGQIAGTVTVLHDVSVT--RAMELKMAHLAQHDFLTDLPNR 345 Query: 342 RALNRALRD--------APWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEP 393 R L+ LR A+ ++ I + + + G + + Q ++ L+ + Sbjct: 346 RVLDDRLRQAISLARRQGKQLAVLFVDIDRFKHINDSLGHGMGDKALQSMAERLTTCVRA 405 Query: 394 GEDVYQLSGNDLALRLNTESHQERITALDSHLKQ---FRFFWDGMPMQPQIGVSYCYVRS 450 + V + G++ + L + + + + +Q + + Sbjct: 406 SDTVARQGGDEFVILLAEVTTADDAAIVAKKILSAVALPHRIGRHELQISASIGISTCPN 465 Query: 451 PVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFF 510 + L+ + + N + + + + ++ + L+ ALE F Sbjct: 466 DADDAETLIKHADIA--MYQAKEKGRNNYQFFRADMNERVLQRQSLESSLRLALERQEFL 523 Query: 511 LMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQF 568 L QP + E L+R + L+ P SF+ VA + GL I WV++ + Sbjct: 524 LHYQPKMNLETGHITGMEALIRWRHPELGLVPPASFIGVAEDCGLMQPIGRWVLQEACRQ 583 Query: 569 MAENR-AKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVK 627 + E A + A+N+S + F V L + ++ L E+TE+ + + Sbjct: 584 VKEWMVAGLNPVPVAVNVSAVEFRRKHFFDGVISTLRETDLDPRYLELELTETVLMKEAE 643 Query: 628 QAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVA 687 L L+ G ++AIDDFGTGY+S + L + D LKID SF+ ++ + + + IV+ Sbjct: 644 PTIAVLHALKSAGVKLAIDDFGTGYSSLSYLTRLPVDTLKIDRSFVTDVTTRTDNAAIVS 703 Query: 688 SICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIRESA 747 +I + + + V+AE VE +E + S QGY +P + + ++ Sbjct: 704 AIIGMGKSLNLNVIAEGVETQEQLALLRSHCCAEGQGYYFSRPVSVPAVAELLNTELRTS 763 >UniRef50_Q47Y83 Sensory box sensor/GGDEF/EAL domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47Y83_COLP3 Length = 1071 Score = 687 bits (1773), Expect = 0.0, Method: Composition-based stats. Identities = 109/578 (18%), Positives = 221/578 (38%), Gaps = 32/578 (5%) Query: 194 FYLRSYYSQLKQQVDAKVTKKEFALWLLALGALLLLLCMPLNEKSTIF--STNYTLSLLL 251 + + ++K + + + ++ + + F + +++ +L Sbjct: 494 AFNQMLAERIKSE--GEQRISAAVFKYASEAIMITNAENRIETVNPAFCHISGFSIEEVL 551 Query: 252 PLM--MWGAMRYGYKLISLLWAVV-----LMISIHSYQNYIPIYPGYTTQLTITSSSYLV 304 + + ++ +W + I + + IYP + + Sbjct: 552 GKSPNILNSGKHDNHFYQKMWQSLEQDNSWQGEIWNKRKNGEIYPEFLAISVVRDQDKKP 611 Query: 305 FSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRDA--------PWSAL 356 +I + + T+ + I A D + LPN L + AL Sbjct: 612 LQYISLFSDI--TKHKKYEEDIWLQANYDSLTGLPNRGLCVERLHNKLKGDKAEDSEVAL 669 Query: 357 CYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQE 416 ++ + + + +G + + + L + + V + G++ + L S++ Sbjct: 670 LFIDLDRFKFVNDTWGHSSGDELLKLAAIRLRNCIREKDTVARFGGDEFVVLLVGLSNRF 729 Query: 417 RITALDSHLK---QFRFFW-DGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVT 472 I + ++ F + + +++ LLL +T + Sbjct: 730 AIERVVKNILTSLSMPFHLRNNNEAVVSASIGVTIGPVDGDNVELLLKNADTA--MYQAK 787 Query: 473 NAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLR 530 A N + + + ++ + L+QA++ F L QP+ + + E L+R Sbjct: 788 AAGRNTFQFFTKSMNETVSRRMHIEQALRQAIKRQEFVLHYQPVVSLDTGEIIGAEALIR 847 Query: 531 MKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSV 590 + + LI PDSF+ +A E GL I WVIE + + A+N+S Sbjct: 848 WQHPDKGLIYPDSFIEIAEEAGLIEPIGQWVIEQACTDLRYWHDLGLKIQVAVNVSSRQC 907 Query: 591 CQAR---FPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDD 647 Q + + L I L E+TES+ + N ++ TLQ ++ LG I +DD Sbjct: 908 KQTSQTPIKDIIKKALKVNNISPSSLKVEITESSLMDNSEEMMTTLQDIRSLGVAIYMDD 967 Query: 648 FGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVEN 707 FGTGY+S + LK+ D++KID SFI + + D +V ++ + + +V E +E Sbjct: 968 FGTGYSSLSYLKHFPIDVMKIDRSFIAGSIDDKTDASLVEAVVLIGHSLSLKLVGEGIET 1027 Query: 708 EEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIRE 745 ++ + + SLG DY QGY I KP + + + Sbjct: 1028 KQHYDYLRSLGCDYGQGYFISKPIASKALITLCQQVGN 1065 >UniRef50_Q1JX80 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JX80_DESAC Length = 678 Score = 687 bits (1773), Expect = 0.0, Method: Composition-based stats. Identities = 106/483 (21%), Positives = 191/483 (39%), Gaps = 19/483 (3%) Query: 273 VLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYV 332 ++ + ++ + ++ + + TR++ RI+ LAY Sbjct: 197 SIVCEKRYIRKDGSVFWAQLSSTWFFDANGNPLYTVPVIQDI--TRRKEAEERIRELAYY 254 Query: 333 DPVVHLPNVRALNRAL--------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLS 384 D + L N N L R AL +L + + + G + ++ + Sbjct: 255 DSLTGLANRTLFNDRLDQVMARSRRRQSRFALMFLDLDRFKGVNDTLGHAVGDAMLRQAA 314 Query: 385 HWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLKQF---RFFWDGMPMQPQI 441 L+ L + V +L G++ + L+ + + + + F + Sbjct: 315 ERLNECLRENDTVARLGGDEFVIILSDYKEDANLPRVADKILKALSSPFDLGVREVYSST 374 Query: 442 GVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQ 501 V + LL + + + + R + + ++ M L+ Sbjct: 375 SVGIAIYPDDGDEATDLLRHADMA--MYAAKESGGDTFRFYSSEMNARAVSRMDMEANLR 432 Query: 502 QALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDM 559 +ALE FF+ QP + + E LLR + +I P F+ +A E L + Sbjct: 433 RALEQEEFFIEYQPQIDLITNKVAGVEALLRWQHPQLGVIPPTQFIGLAEETNLILPLGE 492 Query: 560 WVIEHTLQFMAEN-RAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVT 618 WV+ + + R IN+S Q F V +LL + L FE+T Sbjct: 493 WVMRRVFEQCVMWKQEGYLPFRVGINVSGRQFVQPDFVDMVCRLLDETGAAPELLEFEIT 552 Query: 619 ESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVS 678 ES + +V A +TL+ L++LG +AIDDFGTGY+S + LK++ + LKID SFI ++ Sbjct: 553 ESVVMKDVDAAVLTLEALKKLGINMAIDDFGTGYSSLSCLKHLPLNRLKIDKSFISDLQD 612 Query: 679 NSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTL- 737 N+ D IV + +A+ ++ V AE VE E V D +QG+ +P + Sbjct: 613 NADDRAIVEATIAMAKRLELGVTAEGVETEGQYGFVQKRECDEVQGFYFSRPLSPSEVAD 672 Query: 738 NEI 740 + Sbjct: 673 AWL 675 >UniRef50_A3DCG7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Clostridium thermocellum RepID=A3DCG7_CLOTH Length = 862 Score = 686 bits (1772), Expect = 0.0, Method: Composition-based stats. Identities = 101/463 (21%), Positives = 189/463 (40%), Gaps = 18/463 (3%) Query: 293 TQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL---- 348 T I + S ++ +V + T + + + Y DP+ LPN + L Sbjct: 391 TVAPIRNDSDVIIGTVVALKDI--TEIKKKDEILYNMEYYDPLTGLPNRSLFSDRLKMAL 448 Query: 349 ----RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGND 404 R+ AL L + + + G + ++++ + L + V ++ G++ Sbjct: 449 AQSKRNNEMCALIILDLDNFKAINDTLGHSVGDMLLKQVAEKIKGYLREVDTVARIGGDE 508 Query: 405 LALRLNTESHQERITALDSHLK---QFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGE 461 + T + Q + +G + + + Sbjct: 509 FIIIQPQIKDINDATRAADRILKKFQQPWILEGKEYYITASMGIGIYPNGGEDPQTIFKN 568 Query: 462 LNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRG 521 +T L N + + +++ ++ + N L++A+E F L QP ++ Sbjct: 569 ADTA--LYRAKELGRNNYQLYTESMNQKVLQRLDIENSLRRAIEKEEFVLFYQPQIDIKT 626 Query: 522 D--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAEN-RAKMPA 578 V E LLR + L+ P F+PVA + GL I WV+E + + + Sbjct: 627 GKIVGFEALLRWYHPDYGLMPPMEFIPVAEDSGLIVVIGEWVLETACRQNKKWIECGLEP 686 Query: 579 HRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQE 638 H ++NLS ++ + ++ + + L E+TES A+ ++ L L++ Sbjct: 687 HLISVNLSARQFQRSNIVEVIDRIRSSTGLAPELLELEITESTAMQDLSFTIDVLNQLRK 746 Query: 639 LGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKM 698 G ++++DDFGTGY+S L+ + D LKID SF+++I +NS + I ++ LA + Sbjct: 747 KGIRVSLDDFGTGYSSLNYLRQLPIDTLKIDKSFVQDIRANSKEEAIAKTVISLAHKLDL 806 Query: 699 LVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIE 741 VVAE VE +E + D QGYL KP P + + Sbjct: 807 TVVAEGVETKEQLLFLKKEKCDKAQGYLFSKPLPAEEIEKMLR 849 >UniRef50_Q607T2 Sensory box protein/GGDEF domain protein n=2 Tax=cellular organisms RepID=Q607T2_METCA Length = 1346 Score = 685 bits (1770), Expect = 0.0, Method: Composition-based stats. Identities = 120/529 (22%), Positives = 213/529 (40%), Gaps = 26/529 (4%) Query: 232 MPLNEKSTIFSTNYTLSLLLP--LMMWGAMRYGYKLISLLW-----AVVLMISIHSYQNY 284 + + T Y+ + + R+G + + +W + + Sbjct: 807 IVAVNPAFSDMTGYSPEEAVGRTPAFLQSGRHGKEYYAAMWRAVDQEGSWQGEFWNRRKN 866 Query: 285 IPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRAL 344 ++ T +T+ + + ++I + + + I LAY DP+ LPN R L Sbjct: 867 GELFAVLETIVTVRDETGAMVNYIGVAADI--SSLKEAEEHIHHLAYYDPLSALPNRRYL 924 Query: 345 NRA--------LRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGED 396 R A+ +L + + + + G + + +++ + + Sbjct: 925 MERAEYALALAERRKEELAVVFLDVDHFKDVNDSLGHQVGDELLVRVATQIKEFTRETDT 984 Query: 397 VYQLSGNDLALRLNTESHQERITALDSHLKQF---RFFWDGMPMQPQIGVSYCYVRSPVN 453 V +L G++ AL L ++ ++ + + F G + Sbjct: 985 VARLGGDEFALLLPDLG-RDAVSQVADKILAALRKPFEHSGQTFAVTGSIGISLYPHDGT 1043 Query: 454 HIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMA 513 LL +T + N R + ++ ++ +++ L++A+ Sbjct: 1044 DFETLLRNADTA--MYHAKQQGRNQFRFYDPGMNVDILARLTVLSELREAIPAGELRTFF 1101 Query: 514 QPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAE 571 QP + V E L+R + L+SPD F+PVA L +I WV+E T + +A+ Sbjct: 1102 QPEIDLANGTLVGAEALVRWQHPTRGLLSPDQFIPVAESNDLIIAISDWVLEDTCRHLAQ 1161 Query: 572 NR-AKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQ 630 + A +NL+ R V LL +Y + L E+TES L Q Sbjct: 1162 WKKADQAPITVGVNLAARHFRDPRLVPRVKSLLCRYGVPGSSLQLELTESTLLDADAQTM 1221 Query: 631 ITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASIC 690 I LQ L LGC ++IDDFGTGY+S + LKN+ LKID SF+R+I ++ D I ++ Sbjct: 1222 IVLQELIALGCSLSIDDFGTGYSSLSYLKNLPIATLKIDQSFVRDIAFDADDRTISGTVV 1281 Query: 691 HLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNE 739 L + V+AE VE EE R +L G D+ QGYL +P + + Sbjct: 1282 ALGHSLGLKVIAEGVETEEQRRILLEQGCDFGQGYLFSRPLSSKEFIKW 1330 >UniRef50_A4G3M6 Putative two-component response regulator n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G3M6_HERAR Length = 818 Score = 685 bits (1769), Expect = 0.0, Method: Composition-based stats. Identities = 112/486 (23%), Positives = 202/486 (41%), Gaps = 19/486 (3%) Query: 275 MISIHSYQNYIPIYPGYTTQLTITS-SSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVD 333 + + +Y ++ ++ S V F+ V T+ + ++ A D Sbjct: 335 SVLLRNYHKDGSMFLNELYIAPVSDTSGGAVGHFVGVLYDV--TQIKRYQEDLEHQANYD 392 Query: 334 PVVHLPNVRALNRA--------LRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSH 385 + L N LN R + +L ++ + +++ + G + + Sbjct: 393 TLTGLANRNLLNERTQQALLQARRHDHFLSLVFIDLDNFKLVNDSMGHGAGDELIANVGS 452 Query: 386 WLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLKQF---RFFWDGMPMQPQIG 442 L + G+ V ++ G++ L L +S + + ++ + G + Sbjct: 453 RLQTCVRDGDTVARIGGDEFVLLLTNQSVSDSNAGVMQRIQAELIKPMWIRGQEIVVTCS 512 Query: 443 VSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQ 502 + LL +T + ++ N + + +++++ + L Sbjct: 513 MGVARFPEDGEDSESLLANADTA--MYRAKSSGRNNFQFYTKEMNATSGERLSLESDLWH 570 Query: 503 ALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMW 560 AL+++ FL+ QP +R + E L+R + LI+P F+P+A GL I +W Sbjct: 571 ALKNDELFLVYQPQIDLRDGTVIGMEALIRWQHPKRGLIAPMDFIPMAECNGLIIPIGIW 630 Query: 561 VIEHTLQF-MAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTE 619 V+E + + + +P R AINLS + F V ++ ++ L EVTE Sbjct: 631 VLETACRHNLQLQKEGLPPIRVAINLSARQLSDRNFVESVQSVIEAIGLDPHYLELEVTE 690 Query: 620 SNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSN 679 S + NV+ +TL L ++G Q+++DDFGTG++S A LK D LKID SFI N S+ Sbjct: 691 SMVMHNVEDVVVTLNDLNKMGIQLSLDDFGTGFSSLAYLKRFPIDRLKIDQSFIFNCDSD 750 Query: 680 SLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNE 739 D I +I LA K+ V+AE VE E + G D QGY I +P D Sbjct: 751 PGDAIIAQTIIALAHGLKIKVIAEGVEKSEHLSFLKKNGCDEGQGYFISRPLTFDDLRMF 810 Query: 740 IEPIRE 745 + + Sbjct: 811 LLTGKN 816 >UniRef50_Q5P4K8 Putative sensory box/GGDEF family protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P4K8_AZOSE Length = 698 Score = 685 bits (1768), Expect = 0.0, Method: Composition-based stats. Identities = 111/467 (23%), Positives = 191/467 (40%), Gaps = 16/467 (3%) Query: 282 QNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNV 341 + + + S V FI V T + +R+ A D + LPN Sbjct: 225 RENGAQQSVELFLAPVENESGDVTHFIGVLNDV--TARTHAEKRLIHQASHDALTGLPNR 282 Query: 342 RALNRALRD------APWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGE 395 LN + +A+ +L + +++ +YG + +++++ +S L G+ Sbjct: 283 NLLNDRITHAIARSRGRLTAVMFLDLDRFKLVNDSYGHAVGDALIREVANRVSACLRAGD 342 Query: 396 DVYQLSGNDLALRLNTESHQERITALDSHLKQ---FRFFWDGMPMQPQIGVSYCYVRSPV 452 V +L G++ + L + E L + L+ + + + Sbjct: 343 TVARLGGDEFVVLLEDLASIEDAARLAAKLRDRLSESVRIGSLELPLSASIGVALAPRDG 402 Query: 453 NHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLM 512 +LL + + N + + ++ + + L++AL Sbjct: 403 RDPEMLLKNADIA--MYRAKERGRNNYCFYGPEMDHHARRRLTVESELRRALAGGELEAH 460 Query: 513 AQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMA 570 QP + E L+R + L+ P F+ VA E GL + V+ + Sbjct: 461 YQPQVDLATGALTGAEALVRWRHPERCLLLPGEFIAVAEETGLIVPLGEQVLRAACRQST 520 Query: 571 ENR-AKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQA 629 R A P + A+NLS Q +V +LA+ A QL E+TES A+ + + Sbjct: 521 RWREAGRPDLKVAVNLSGHQFRQHDLVEQVCDILAETGAHAAQLELEITESVAMADADGS 580 Query: 630 QITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASI 689 TL L+ G +AIDDFGTGY+S + LK D LKID SFI+ I ++ D IV +I Sbjct: 581 VATLAGLRRQGIALAIDDFGTGYSSLSYLKRFPIDTLKIDRSFIQGIPADGDDTAIVQAI 640 Query: 690 CHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDT 736 +AR ++ ++AE VE RE +++ G QG+L G+ P D Sbjct: 641 IAMARSLRLSLLAEGVETPAQREFLVAQGCRSGQGFLFGRAMPAEDF 687 >UniRef50_Q1LBF7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=7 Tax=cellular organisms RepID=Q1LBF7_RALME Length = 839 Score = 685 bits (1768), Expect = 0.0, Method: Composition-based stats. Identities = 124/613 (20%), Positives = 227/613 (37%), Gaps = 36/613 (5%) Query: 155 LVGVMPFNLGTLINYQALLVGNLIGVPL-------CYFIIRVVRNPFYLRSYYSQLKQQV 207 + +++ Q L G L + +R + + + Sbjct: 223 FLSDNRLRHVGVLDAQGELTGLLSLSDILCGIEHEYVHELRTALHERDEA--LRRSNYHL 280 Query: 208 DAKVTKKEFALWLLALGALLLLLCMPLNEKSTIFSTNYTLSLLLP--LMMWGAMRYGYKL 265 E L + + L + + T YTL + M + R G Sbjct: 281 RLADRVFESTLDGVMVTDL--NGVIEQVNPAFTQLTGYTLDEAIGRTPRMLSSGRQGPSF 338 Query: 266 ISLLWAVV-----LMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQR 320 +W+ + I + + +Y + + +I + + + + + T +R Sbjct: 339 YQEMWSQLRAQGHWKGEIWNRRKNGELYLEHLSVSSICNQAGECTHYAAIFSDI--THRR 396 Query: 321 AVVRRIQRLAYVDPVVHLPNVRALNRALRDAPW--------SALCYLRIPGMEMLVKNYG 372 R+ LA DP+ LPN + L+ A + +L + +M+ G Sbjct: 397 IAEERLNHLAMHDPLTDLPNRTLFSERLKQAIIRARRASRRVGVLFLDLDRFKMINDTMG 456 Query: 373 IMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLKQF---R 429 + ++ L + + V +L G++ + + + + L Sbjct: 457 HGTGDDALRVIAMRLKHAVRESDTVARLGGDEFTIVVEEIEDIRHVAHIAQVLLDVVGQP 516 Query: 430 FFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRE 489 G + + LL + + + +N R A + Sbjct: 517 IDAAGRSVFVTPSIGISIYPDDGTDQQQLLMQADRA--MYEAKQEGKNTFRFFATQMTSS 574 Query: 490 LKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPV 547 + +A+ L++AL F L QPI + V E LLR + L+SP +F+ V Sbjct: 575 AMESMALECELRRALTRREFRLHYQPIYDLGSGRIVSVEALLRWQHPTRGLLSPGAFIDV 634 Query: 548 AHEFGLSSSIDMWVIEHTLQFMAEN-RAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKY 606 A E L I WV+ + A R+ R ++NLS + F +VS +L+ Sbjct: 635 AEESALVVPIGAWVLREACRQGAAWLRSGFEFGRMSVNLSARQIRHEHFLHDVSDVLSDA 694 Query: 607 QIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLL 666 ++ L E+ ES A+T ++ L L G +AIDDFGTGY+S+ L+ + D + Sbjct: 695 GMQPEHLQLELVESMAMTGNGVTELVLGELARRGVGLAIDDFGTGYSSFTYLQTLPVDTV 754 Query: 667 KIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYL 726 K+D SF+ ++ D I+ +I +AR + VVAE VEN + + +G D QG+L Sbjct: 755 KVDRSFLTAVIERERDGAILRAIVAMARALGLTVVAEGVENIAQLQFLREIGCDRAQGFL 814 Query: 727 IGKPQPLIDTLNE 739 + +P P Sbjct: 815 LARPGPAEALTAL 827 >UniRef50_Q12GF0 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=3 Tax=Polaromonas RepID=Q12GF0_POLSJ Length = 989 Score = 685 bits (1768), Expect = 0.0, Method: Composition-based stats. Identities = 117/538 (21%), Positives = 206/538 (38%), Gaps = 30/538 (5%) Query: 232 MPLNEKSTIFSTNYTLSLLL---PLMMWGAM-RYG---YKLISLLWAVVLMISIHSYQNY 284 + + T YT +L P M+ G R +L + Y+ Sbjct: 454 IVFVNDAFERHTGYTRDEVLSRMPGMLQGPGTRQDELARIFSALQQWKQARGELVIYRKD 513 Query: 285 IPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRAL 344 + +++ + + + ++ + T+++A +I LA+ DP+ LPN + L Sbjct: 514 GGSFWVDLEIVSVAAQNGDLTHWVAVGRDI--TQRKAADEKIHHLAFYDPLTELPNRQLL 571 Query: 345 NRALRDA--------PWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGED 396 L A L ++ + ++L G QK++ L + + Sbjct: 572 LDRLEQALADCTITRQEGVLMFIDLDNFKILNDTVGHSKGDLLLQKVAVRLKGCVRKLDT 631 Query: 397 VYQLSGNDLALRLNTESHQERITA-----LDSHLKQ---FRFFWDGMPMQPQIGVSYCYV 448 V +L G++ + L Q + + + G + Sbjct: 632 VARLGGDEFVVMLQDLGTQPEAATRKAQIVAEKVLATLREPYDLAGYQHYSTSSIGVTPF 691 Query: 449 RSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNH 508 + + LL + + + N +Q + A+ L+ L + Sbjct: 692 NARQGSVSELLKQADLA--MYQAKTMGRNTVCFFDPDMQASVSANAALSTDLRAGLREHQ 749 Query: 509 FFLMAQPITGMRGDV-YHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQ 567 F + QP + E LLR K ++SP F+PVA E GL + WV+E Sbjct: 750 FLVHYQPQVDREQRITGVEALLRWKHPQRGMVSPAEFIPVAEETGLILPLGQWVLEQACL 809 Query: 568 FMAENRAK--MPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTN 625 +A + + A+N+S F V + I+ L E+TES Sbjct: 810 QLAVWQKRPETAGLSIAVNVSVRQFRHPDFVDMVMAAIKHTGIQPHNLKLELTESLLADR 869 Query: 626 VKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQI 685 ++ A + L+ LG +A+DDFG GY+S + LK + D LKID SFI ++ S+ D I Sbjct: 870 MEIAIAKMGTLKALGVTLALDDFGMGYSSLSYLKRLPLDQLKIDKSFIADVFSDPNDAAI 929 Query: 686 VASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPI 743 ++I LA+ + V+AE VE E R + LG Y QG+L P P+ + ++ Sbjct: 930 CSAIISLAQSLGLDVIAEGVETEAQRSFLAGLGCGYYQGFLFCPPLPIAEFEAFMQGA 987 >UniRef50_Q0ACK6 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0ACK6_ALHEH Length = 857 Score = 685 bits (1768), Expect = 0.0, Method: Composition-based stats. Identities = 114/528 (21%), Positives = 203/528 (38%), Gaps = 23/528 (4%) Query: 236 EKSTIFSTNYTLSLLLP--LMMWGAMRYGYKLISLLWAVV-----LMISIHSYQNYIPIY 288 + + Y L+ + + G + +W + + + + Y Sbjct: 327 NPAFEAISGYREEELVGRTPRLLQSGHQGPRFYREMWEALKSRGHWQGELWNRRADGETY 386 Query: 289 PGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL 348 P + +T+ + V +I + T +A + I LA+ D + L N R L L Sbjct: 387 PSLLSVSAVTNDNDEVTHYIGIASDI--TSHKAAEQHIDYLAHYDTLTGLGNRRLLEEEL 444 Query: 349 -------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLS 401 R AL +L + + + G + ++++ L L P + ++ Sbjct: 445 ERMLRNARGGRPFALFFLDLDRFKNINDTLGHESGDRLLEEVADRLRDLAGPQATLCRIG 504 Query: 402 GNDLALRLNTESHQERITALDSHLK--QFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLL 459 G++ A+ SH++ ++ + P+ V L+ Sbjct: 505 GDEFAILAPGLSHRQTAGIARQLVEGISRPYEITERPLVVTCSVGVAVHPRDGTRREALI 564 Query: 460 GELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGM 519 +T L V N + + +++ + N L++AL F L QP+ Sbjct: 565 SAADTA--LHYVKAHGSNHYQFHEPGMTAAAAERLHLENDLREALLRGEFELYYQPVLDT 622 Query: 520 R--GDVYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRA-KM 576 E LLR LI PD F+P+A E GL I WV+ A R + Sbjct: 623 ERLTVCGAEALLRWHHPEAGLIPPDRFIPLAEETGLIRPIGTWVLREACAQAARWRRLGL 682 Query: 577 PAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHL 636 ++N+S + P V Q L + L+ E+TES + + L+ L Sbjct: 683 TGMTVSVNVSGEQFWRDELPQAVRQALEAQALAPDALVLEITESVLMHGSANTETRLREL 742 Query: 637 QELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMK 696 + +G +++DDFGTGY+S + LK D LKID SF+R++V + D + ++ + Sbjct: 743 KAMGVGLSLDDFGTGYSSLSYLKRFPIDTLKIDKSFVRDMVRDEHDRTLAQTVIAMGHGL 802 Query: 697 KMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIR 744 + VVAE VE+ E + D +QGY +P P I+ + Sbjct: 803 GLQVVAEGVESAEHLPLLRRARCDRVQGYHFSRPLPARALSRWIQQHQ 850 >UniRef50_Q7NYX4 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NYX4_CHRVO Length = 795 Score = 684 bits (1767), Expect = 0.0, Method: Composition-based stats. Identities = 114/488 (23%), Positives = 206/488 (42%), Gaps = 18/488 (3%) Query: 274 LMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVD 333 + + YP + + L+ +++ + + T+++ R+Q LA D Sbjct: 309 WQGEMLDRRKGGQWYPAELSISALRDEDGLLSNYVAVFSDI--TQRKEAEERLQFLANHD 366 Query: 334 PVVHLPNVRALNRALRDA--------PWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSH 385 P+ LPN L +L +A A+ ++ + +++ ++G + Q +++ Sbjct: 367 PLTRLPNRSRLTASLDEALTRMDGEDGRLAVMFIDLDRFKLINDSFGHQVGDQLLCEIAI 426 Query: 386 WLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLKQF---RFFWDGMPMQPQIG 442 LS ++ + +L G++ L ++ ++ + S + + + Sbjct: 427 RLSRVVGERGMLARLGGDEFTLLMSGFDSHHQLADMASDILAALGKPLCLEAHEVFITGS 486 Query: 443 VSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQ 502 + LL + + A +N + + + + +++ + N L+ Sbjct: 487 IGISVFPHDGRDARTLLKNADVA--MYRAKEAGKNTYQFFDIGMNTQTFERLLLENGLRM 544 Query: 503 ALEHNHFFLMAQPITGMRGDV--YHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMW 560 ALE + F L QP E LLR + L+ P F+ +A E GL I W Sbjct: 545 ALERHEFELHYQPQLSAGERALAGAEALLRWRHPQLGLVPPARFIALAEETGLIKPIGDW 604 Query: 561 VIEHTLQFMAENRA-KMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTE 619 V+ + +A A + R A+NLSP Q P +V+ L + A +L E+TE Sbjct: 605 VLREACRQLAAWDAQGLRVPRLAVNLSPRQFGQPSLPAKVAGALQAAGLAAGRLELEITE 664 Query: 620 SNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSN 679 S + + +A L L+ LG ++IDDFGTGY+S + LK D LKID SF+ + + Sbjct: 665 SMIMQSPTEAVSLLSELKSLGVWLSIDDFGTGYSSLSHLKRFPLDTLKIDQSFVEGLPDD 724 Query: 680 SLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNE 739 + I +I +A+ K VVAE VE+EE + G +QGY G+P P + Sbjct: 725 DDNAAIAEAILAMAKKLKFQVVAEGVESEEQAAFLEGKGCHVLQGYHFGRPLPAGEFAAL 784 Query: 740 IEPIRESA 747 R A Sbjct: 785 AAGWRREA 792 >UniRef50_A4U4T7 Two-component sensory box protein n=3 Tax=Magnetospirillum RepID=A4U4T7_9PROT Length = 828 Score = 684 bits (1767), Expect = 0.0, Method: Composition-based stats. Identities = 122/533 (22%), Positives = 217/533 (40%), Gaps = 25/533 (4%) Query: 236 EKSTIFSTNYTLSLLLP--LMMWGAMRYGYKLISLLWAVV-----LMISIHSYQNYIPIY 288 + T +T +L + + R+ + LW V+ I + ++ Sbjct: 292 NPAFTRITGFTADEVLGRNPRLLASGRHDHDFFIQLWTVLLRDGKWQGEIWDRRKDGEMF 351 Query: 289 PGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL 348 G+ + + V +F+ + T ++ V R+ A DP+ LPN L Sbjct: 352 AGWQNIAVVRDTDGKVQNFVAVISDI--TTRKQVEERLSYAANHDPLTRLPNRTLFQERL 409 Query: 349 --------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQL 400 R+ AL ++ + + + G + Q+++ LS + G+ V +L Sbjct: 410 TRAIARASRNHNLVALLFIDLDRFKQVNDTMGHLAGDMLLQQVAERLSSCIRQGDTVARL 469 Query: 401 SGNDLALRLNTESHQERITALDS---HLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYL 457 SG++ + L + L Q G + + Sbjct: 470 SGDEFTIILEDVQDPRDAAVVGHKVLRLLQEPVALTGGEAHISSSIGVSLYPTDAGDPQT 529 Query: 458 LLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPIT 517 LL + A + + N + + + E +++A+ N L+ A++ F L QPI Sbjct: 530 LLKLAD--AAMYRAKHLGRNSCQFHSEAVNAEAFERLALENALRGAVDQGQFLLHYQPIF 587 Query: 518 GMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENR-A 574 ++ V E LLR + +++P+ FL +A E G+ I WV + + R A Sbjct: 588 DVKSGRAVAVEALLRWRHPEVGVVAPNQFLALAEETGMIVPIGRWVFDQACRQAKLWRDA 647 Query: 575 KMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQ 634 R INLSP + Q V+ L Q+ L+ EV E+ + Sbjct: 648 GHVDLRLHINLSPRQLRQPDLIEMVAAALEVSQLPPQALVLEVMETCVIDKAFDPSALFA 707 Query: 635 HLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLAR 694 LG +AID+FG+GY+S+A L+ + +LK+ SF+RN+ S+ + +IV +I LAR Sbjct: 708 RFAALGVGLAIDEFGSGYSSFAFLRRLPVTILKVAQSFVRNLSSSEDESEIVTAIVALAR 767 Query: 695 MKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIRESA 747 M VVA +EN+ + + G D +QG+L+ KP P + ++ R A Sbjct: 768 GLHMTVVAPGIENKAQLDFLTGFGCDKVQGFLLSKPLPGTEMTEFLDLKRSPA 820 >UniRef50_Q2SF23 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SF23_HAHCH Length = 637 Score = 684 bits (1767), Expect = 0.0, Method: Composition-based stats. Identities = 133/634 (20%), Positives = 243/634 (38%), Gaps = 44/634 (6%) Query: 151 SRENLVGVMPFNLGTLINYQALLVGNL---IGVPLCYFIIRVVRNP---FYLRSYYSQLK 204 V+P +L L + + + +L G L + I+ + +L +L Sbjct: 3 KHGEFWDVLPISLLMLGSVATIHLASLYYFEGESLSWPILTTLSIAVIFAFLSLIQIRLN 62 Query: 205 QQVDAKVTKKE--------FALWLLALGALLL----LLCMPLNEKSTIFSTNYT------ 246 +Q+ AKV + + G ++ L + + T Y Sbjct: 63 RQLAAKVKALHERDFKLKKLSSAVTNSGCSIIITDRLGRIEFVNNKFVNVTGYGQEEARG 122 Query: 247 --LSLLLPLMMWGAMRYGYKLISLLWAVVLMISIHSYQNYIPIYPGYTTQLTITSSSYLV 304 L +L P M S + + S + + T T+ S V Sbjct: 123 RFLDILNPKDMDAEKPQEQIWESDILYDGWEGEVLSRRRDGYDFWWAVTVSTVCDSDNTV 182 Query: 305 FSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL--------RDAPWSAL 356 +++ V + + R++Q++A D + L N R L RD AL Sbjct: 183 TNYV--ISGVDVSELKEANRKMQQMALYDSLTGLANRRLFVDRLEQAVKAASRDRKQIAL 240 Query: 357 CYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQE 416 +L + + + G Q ++ L + + V +L G++ + L Sbjct: 241 LFLDLDQFKRINDTLGHDAGDSLLQTVAQRLKNCVRAKDTVARLGGDEFTVLLTDIVDTF 300 Query: 417 RITALDSHLKQF---RFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTN 473 +T + + + + + + + + +L+ + L Sbjct: 301 SVTPVATQILKALKEPIKLKKHEVIVSTSIGVTLAPTDGANADVLMKNADLA--LYRAKE 358 Query: 474 APENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRM 531 + L ++ M L+ AL+ F L QP + V E L+R Sbjct: 359 HGRDRYHFYTEELNAHALKQLLMEQELRHALQFEEFTLGFQPQVNLTTGKIVSVEALIRW 418 Query: 532 KGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRA-KMPAHRFAINLSPTSV 590 + L+ PDSF+ VA E GL + I WV+++ M + A + A+NLS Sbjct: 419 HHPSKGLVMPDSFISVAEETGLINPIGRWVLKNACMQMKMLQDLTGSAIKIAVNLSARQF 478 Query: 591 CQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGT 650 + + + L + +E L EVTES + +++ L+ L++ G +AIDDFG+ Sbjct: 479 DDPKLEQSIEEALNETGLEPEWLELEVTESMLMGDIQAVTNKLKRLRQTGVSLAIDDFGS 538 Query: 651 GYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEI 710 GY+S + LK + + LK+D F+R+I +S D +I ++I +A ++ VVAE VE E Sbjct: 539 GYSSLSYLKKLPVNALKVDREFVRDIPEDSNDMEITSAIIAVAHKLQLKVVAEGVETAEQ 598 Query: 711 REAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIR 744 +E +L+ D+ QGY KP D + + Sbjct: 599 KEYLLANQCDFAQGYFFSKPLSFEDLYIYLNEHK 632 >UniRef50_A1KA22 GGDEF/EAL/PAS/PAC/GAF-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KA22_AZOSB Length = 1006 Score = 684 bits (1766), Expect = 0.0, Method: Composition-based stats. Identities = 113/475 (23%), Positives = 186/475 (39%), Gaps = 18/475 (3%) Query: 281 YQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPN 340 ++ ++ T L + S V F + + +RA IQRLA+ D + LPN Sbjct: 524 RRDGGTVWAEVVTTLGLNRRSGRVE-FRAVARDI--SERRAAEAEIQRLAHYDQLTGLPN 580 Query: 341 VRALNRA--------LRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLE 392 + R A+ + + + + G + +++ L +L Sbjct: 581 RSLVKDRFRYAASLTQRRRGQLAVMFFDLDHFKNINDTLGHDFGDRLLVEVARRLESVLR 640 Query: 393 PGEDVYQLSGNDLALRLNTESHQERITALDSHLKQF--RFFWDGMPMQPQIGVSYCYVRS 450 G+ V +L G++ L + L+ D + + Sbjct: 641 GGDTVCRLGGDEFVFLLPDTDAEGAARVAAKLLEAVAQPLVLDHQELTVTPSIGIAMYPD 700 Query: 451 PVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFF 510 L + A + N R +Q + + N L+ AL+ F Sbjct: 701 DGTDFDTLSRNAD--AAMYQAKREGRNGFRFFTEAMQARSTRTLLLANALRHALDRGQFS 758 Query: 511 LMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQF 568 L QP + V E LLR +SP F+P+A GL + I WV+ + Sbjct: 759 LHYQPQVSLADGRVVGAEALLRWTHPEFGPVSPGEFVPIAESNGLIAQIGEWVLREAVAQ 818 Query: 569 MAEN-RAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVK 627 +P A+NLS P VSQ++ + + Q+ E+TE+ A+ + + Sbjct: 819 SRRWLDEGLPPLVMAVNLSAAQFRNPNLPELVSQVIEEAGLPPHQVELELTEAVAMDDPQ 878 Query: 628 QAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVA 687 A + L G +++IDDFGTGY+S LK LKID SF+R+I + D IV+ Sbjct: 879 SAVRVMDALFARGIRMSIDDFGTGYSSLGYLKRFKVGKLKIDQSFVRDIGDDPDDKAIVS 938 Query: 688 SICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEP 742 +I HLA ML VAE VE + + + G D +QGY +P P + ++ Sbjct: 939 AIIHLAGSLGMLTVAEGVETLDQLDFLRQQGCDTVQGYYFSRPLPAEAFVGYLQE 993 >UniRef50_C0Z6C0 Probable signaling protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z6C0_BREBN Length = 708 Score = 682 bits (1762), Expect = 0.0, Method: Composition-based stats. Identities = 115/483 (23%), Positives = 213/483 (44%), Gaps = 20/483 (4%) Query: 273 VLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYV 332 ++ I++ +N + + I V ++ V T ++ I LAY Sbjct: 230 MVECRINTQRND--VIWTESKINPIMDEEGNVTKLLLITRDV--TDRKQSEETIHHLAYH 285 Query: 333 DPVVHLPNVRA--------LNRALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLS 384 D + LPN R + +A R A+ +L + + + ++G + + S Sbjct: 286 DALTDLPNRRMYVQQLSKEMMQAKRFQSSLAVLFLDLDRFKDVNDSFGHDVGDMLLIEAS 345 Query: 385 HWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHL---KQFRFFWDGMPMQPQI 441 L L+PG+ V +L G++ + N + T L + Q F DG Sbjct: 346 KRLQACLKPGDVVARLGGDEFTIMQNQLLDRNEATELAEQIMYQLQRPFELDGHVFNVSC 405 Query: 442 GVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQ 501 + ++ LL +T L V + +N ++ + +++ M N ++ Sbjct: 406 SIGIALYPQDGDNPEDLLKRADTA--LYTVKSRGKNGYDFFDPSMEAKSLERILMENEMR 463 Query: 502 QALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDM 559 +A+E F + QP + E L+R +I P+ F+P+A E G+ ++ Sbjct: 464 KAIEQEQFQIYYQPKIDIATSAMTGMEALVRWVHPELGIIPPNRFIPIAEETGMILALGE 523 Query: 560 WVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTE 619 W+++ + + + ++NLS + Q + +L + ++ L E+TE Sbjct: 524 WILKQACKQNKNWHDQGYTLKVSVNLSARQIYQKDLVEMIKDILQETKLSPHWLELEITE 583 Query: 620 SNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSN 679 S + +++A LQ ++++G QI+IDDFGTGY+S++ +K++ D +KID SFIR+I N Sbjct: 584 SIFVK-MEEATAVLQQIRDIGIQISIDDFGTGYSSFSYIKSLPVDTIKIDASFIRDIHHN 642 Query: 680 SLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNE 739 IV +I +A+ M V+AE +E + A+ G D+ QGYL KP P D Sbjct: 643 QESQAIVKAIVTIAQSLNMNVIAEGIELHDQVAALKENGCDHGQGYLFSKPLPTDDFDQL 702 Query: 740 IEP 742 + Sbjct: 703 LRQ 705 Score = 83.5 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 15/151 (9%), Positives = 46/151 (30%), Gaps = 13/151 (8%) Query: 189 VVRNPFYLRSYYSQLKQQVDAKVTKKEFALWLLALGALLLL----LCMPLNEKSTIFSTN 244 P + +++ V + + L +L + + + + Sbjct: 7 SSLTPQDWAGLLREKDGELNMVVNELADVKYALDQSTILAITDHKGIILRANEQFCRISK 66 Query: 245 YTLSLLLPL--MMWGAMRYGYKLISLLWA-----VVLMISIHSYQNYIPIYPGYTTQLTI 297 Y S L+ + + + +W+ V I + Y TT + Sbjct: 67 YERSELIGNDHRILNSGYHPKSFFKEMWSCIRSGQVWRGEIRNCAKDGSYYWVDTTIVPF 126 Query: 298 TSSSYLVFSFIVNYMAVLATRQRAVVRRIQR 328 + + ++ ++ + T ++ + ++R Sbjct: 127 KNQAGEIYQYLSIRSDI--TARKQMEDELKR 155 >UniRef50_C6CKZ2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Dickeya RepID=C6CKZ2_DICZE Length = 689 Score = 682 bits (1762), Expect = 0.0, Method: Composition-based stats. Identities = 117/538 (21%), Positives = 220/538 (40%), Gaps = 28/538 (5%) Query: 232 MPLNEKSTIFSTNYTLS--LLLPLMMWGAMRYGYKLISLLWA-----VVLMISIHSYQNY 284 + + T Y+ + + P ++ + R+ + +W V + + + Sbjct: 153 IISINPAFTRLTGYSAADVVGQPSYIFRSDRHDADFYTAMWRTVDEDGVWVGEMWDRKKD 212 Query: 285 IPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRAL 344 Y T I ++ +++ + + T+++ I R A D V LPN Sbjct: 213 GSDYLKEITINVIKDAAGTPINYVGVFSDI--TQRKKQEALIWRQANYDAVTTLPNRHHF 270 Query: 345 NRAL--------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGED 396 L + AL + + + + + G +S+ L+ ++ + Sbjct: 271 QDKLERAVEHAKQSGRPMALMLIDLDHFKSVNDSLGHRAGDALLLAVSNRLTDCVQGADT 330 Query: 397 VYQLSGNDLALRLNTESHQERITALDSHL---KQFRFFWDGMPMQPQIGVSYCYVRSPVN 453 + +L G++ A+ L L L F DG M + + + Sbjct: 331 IARLGGDEFAIILTDLHQNGDSGCLARTLLAQLAQPFNIDGESMLVSASIGIALFPNDSD 390 Query: 454 HIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMA 513 + L + + +A N L + + ++ + N L+ A++ F + Sbjct: 391 TLEELFKNADQA--MYAAKSAGRNCFNYYTPALHQAARARLRLTNDLRTAIQCGQFEVYY 448 Query: 514 QPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAE 571 QPI + + V E L+R + +ISP F+P+A + GL + WV + +A+ Sbjct: 449 QPIIELSTNKVVKAEALVRWRHPIRGMISPAEFIPLAEDTGLIVPLGDWVARQAITQLAQ 508 Query: 572 NRAKM-PAHRFAINLSPTSVCQARFPVE-VSQLLAKYQIEAWQLIFEVTESNALTNVKQA 629 R P + AIN SP + F Q LA++ +E +I E+TE L + Sbjct: 509 WRKIFDPHFQVAINQSPVQLRSKDFTEMTWVQELAQHGLEGNAVIIEITEGLLLNAESRV 568 Query: 630 QITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASI 689 L ++ G QIAIDDFGTGY+S A L+ + D LKID SF+ ++ + + +++ +I Sbjct: 569 NDNLHLFRDTGIQIAIDDFGTGYSSLAYLRKFDIDCLKIDRSFVEDL--DGVGFELCVAI 626 Query: 690 CHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIRESA 747 +A + VVAE VE ++ + + +G DY QG+L +P P + + E + Sbjct: 627 IAMAHSLGLKVVAEGVETQQQCDTLARIGCDYAQGFLFSRPVPAPELTILLLAAAEPS 684 >UniRef50_Q2BPN3 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) withPAS/PAC sensor n=1 Tax=Neptuniibacter caesariensis RepID=Q2BPN3_9GAMM Length = 878 Score = 682 bits (1761), Expect = 0.0, Method: Composition-based stats. Identities = 120/580 (20%), Positives = 231/580 (39%), Gaps = 33/580 (5%) Query: 197 RSYYSQLKQQVDAKVTKKEFALWLLALGALLLLLCMPLNEKSTIF--------STNYTLS 248 ++ + + + E + M ++++ I + Y Sbjct: 303 GLLWNGIILDITPEKASIEQLRLAGIAFSSTNEGIMITDKRNRIIDINRAYMNISGYGRD 362 Query: 249 LLLPL--MMWGAMRYGYKLISLLWAVV-----LMISIHSYQNYIPIYPGYTTQLTITSSS 301 L+ + + + + +W + I + + P + + + Sbjct: 363 ELIGKNPSILRSEHHSNEFYQSIWKSLEEERHWQGEIWNRLKNGEVVPHWVNINAVHDPN 422 Query: 302 -YLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRDA--PWSA--- 355 + F+ + + +A ++ LA+ D + +LPN + L A A Sbjct: 423 TDALTHFVSVIADI--SNIKASEEKLSHLAHHDALTNLPNRLLFSARLDHALTHREASEK 480 Query: 356 -LCY-LRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTES 413 + + L + + + + G Q +++ L +L + + ++ G++ A+ + Sbjct: 481 IVMFHLDLDRFKHINDSLGHKYGDQLLLQVTERLKGVLSDKDTLARVGGDEFAILVEELE 540 Query: 414 HQERITALDSHLKQF---RFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSI 470 H ++ L + F DG + + I L + L+ Sbjct: 541 HVSDAESIADRLVEAMEQPFTLDGKDYFTTASIGLALAPDHGDDIDTLTKHADIA--LNQ 598 Query: 471 VTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRG--DVYHEIL 528 ++ N L +++ + + L++AL N F L QP G V E L Sbjct: 599 AKDSGRNNFAFFQPELSETVQEWIKLEPELRKALAENQFQLHYQPQVDSTGTAIVGAEAL 658 Query: 529 LRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRA-KMPAHRFAINLSP 587 +R +I P+ FLP+A E GL + I WV+ L+ ++ R+ + R AINL+ Sbjct: 659 IRWHHPEMGIIPPNQFLPIAEEIGLMNKIGEWVMNTALEQLSFWRSRGLIGFRLAINLAG 718 Query: 588 TSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDD 647 + + P+ V Q L +QI A L E+ E+ + + ++A T + L+ELG +++DD Sbjct: 719 DQITKQNLPMVVMQALEHFQIPAEMLELEILETFLMEHEEEATSTFKQLRELGVHLSLDD 778 Query: 648 FGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVEN 707 FGTGY++ + LK + +KID S +R+I + D I ++ LA + V AE VE Sbjct: 779 FGTGYSALSYLKKLPITKVKIDQSLVRDIPEDPNDEAIAKAVILLAHTLDLTVCAEGVET 838 Query: 708 EEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIRESA 747 RE + S D +QGYL KP N ++ + A Sbjct: 839 RAQREFLESENCDQLQGYLFSKPIEANAFTNLLKKHNKLA 878 >UniRef50_B1Y3M1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y3M1_LEPCP Length = 745 Score = 682 bits (1761), Expect = 0.0, Method: Composition-based stats. Identities = 110/535 (20%), Positives = 218/535 (40%), Gaps = 31/535 (5%) Query: 232 MPLNEKSTIFSTNYTLSLLLP--LMMWGAMRYGYKLISLLW-----AVVLMISIHSYQNY 284 + K+ T Y+ + + + + R+ + +W + + + Sbjct: 211 IERVNKAFTQMTGYSAAEAIGQTARLLHSGRHDPAFYAAMWDSLQRTGTWQGEVWNRRKC 270 Query: 285 IPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRAL 344 +Y + T + V ++ + + ++++A I +LA+ DP+ LPN R L Sbjct: 271 GEVYAEWLTITAVQDEHRTVTRYVGTMLDI--SQRKAREEEIAQLAFYDPLTGLPNRRLL 328 Query: 345 NRAL--------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGED 396 L R AL ++ + + + G Q ++ LS + G+ Sbjct: 329 KDRLNQAMAISARSQREGALLFIDLDHFKDINDTRGHDKGDLLLQNVAQRLSGCVREGDT 388 Query: 397 VYQLSGNDLALRL-NTESHQER-----ITALDSHLKQ---FRFFWDGMPMQPQIGVSYCY 447 V ++ G++ + L S ++ + + G + + Sbjct: 389 VARIGGDEFVVMLGADLSTATDEAASHARSVAEKILAALNLPYLMSGEFVHCSASLGVAL 448 Query: 448 VRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHN 507 + + LL + + N R +Q+ + + A+ L+ A++ + Sbjct: 449 FNDHHDTVDELLKRADQA--MYQAKAGGRNTLRFFDTAVQQTMMLRAALEAELRLAVQRD 506 Query: 508 HFFLMAQPITGMRGDV-YHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTL 566 L QP+ + + E L+R K L+SP F+P+A + GL +I WV+E Sbjct: 507 ELVLCYQPVIDHQNRLLGAEALVRWKHPRRGLVSPAEFIPIAEDRGLIQAIGRWVLETAC 566 Query: 567 QFMAENRA--KMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALT 624 +A A ++N+S + + +F V ++LA +L E+TE+ L Sbjct: 567 TQLATWAADPATADLVLSVNVSARELHEPQFVERVIEILACTGARPARLKIELTENAVLD 626 Query: 625 NVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQ 684 +V + ++ L+ G ++A+DDFGTG+ S + LK + D LKID +F++++++++ D Sbjct: 627 HVDDSIAKMKRLKAHGIRLALDDFGTGHGSLSLLKRLPLDELKIDRTFVQDLLTDTHDAA 686 Query: 685 IVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNE 739 I +I L + VVAE VE R+ +++ G QG L G P L Sbjct: 687 IARTIAALGLNLGISVVAEGVETPAQRDLLIACGCRIFQGDLFGPPAALEALARM 741 >UniRef50_C7RN47 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RN47_9PROT Length = 1542 Score = 682 bits (1761), Expect = 0.0, Method: Composition-based stats. Identities = 110/529 (20%), Positives = 217/529 (41%), Gaps = 26/529 (4%) Query: 232 MPLNEKSTIFSTNYTLSLLLP--LMMWGAMRYGYKLISLLWA-----VVLMISIHSYQNY 284 + S T YT ++ + + R + + +W V I + + Sbjct: 1006 ILTINDSFSTLTGYTRQEVVGKTPRLLRSDRMPREFYAEMWDKVTRLGVWQGEIWNRRKN 1065 Query: 285 IPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRAL 344 Y + + T+ + V +++ + + T+ R +RI+ LA D + LPN Sbjct: 1066 GEPYLEWLSINTVKDKNGKVVNYVGMFSDI--TKVRESQQRIEYLATHDELTGLPNRALF 1123 Query: 345 NRAL--------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGED 396 N L R + ++ + +++ G + ++ + L + + Sbjct: 1124 NDRLNLALAHAERSRESVGVVFIDLDNFKVVNDTLGHETGDKLLKQAAMRLLECVRAEDT 1183 Query: 397 VYQLSGNDLALRLNTESHQERITALDSHL--KQFRFFWDGMPMQPQIGVSYCYVRSPVNH 454 V +L G++ + L Q+ + L + + + + Sbjct: 1184 VARLGGDEFVVLLVNADRQQATLTAERLLTGLSTSYHFGEHECFISASIGLSMFPEDASD 1243 Query: 455 IYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQ 514 L+ ++ + + +N R + L + ++A+ L++A+E+ F+ Q Sbjct: 1244 ANSLMRNADSA--MYRAKDHGKNGFRFFSADLASQASKRLALETGLRRAIENGELFVHYQ 1301 Query: 515 PITGM--RGDVYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAEN 572 P + V E L+R + N E+I P F+P+A + L +ID WV+ + + E Sbjct: 1302 PQVRLECDTVVGAEALVRWRY-NGEVIDPVVFIPIAEQSHLIFAIDDWVLGEACRQIIEW 1360 Query: 573 -RAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQI 631 RA +P R ++N+S + ++ +++ + + +L E+TE + +V +AQ Sbjct: 1361 DRAGLPPLRISVNISARHFRKDGMAADLMDIVSAHGVSPQRLCIEITEGVLM-DVDRAQR 1419 Query: 632 TLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICH 691 L L E G +I+IDDFGTG++S + LK LKI SF+ I +++ D I + I Sbjct: 1420 MLAELVESGLRISIDDFGTGFSSLSYLKRFPIHELKIARSFVDGISTDADDRAIASVIIS 1479 Query: 692 LARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEI 740 LAR M VV E +E + + G QG+L +P + + Sbjct: 1480 LARQLGMSVVGEGIERTGQHAELEAFGCHRGQGFLYAQPLAPDAFADWV 1528 >UniRef50_A7K0U5 Sensory box/GGDEF family protein n=14 Tax=Vibrio RepID=A7K0U5_VIBSE Length = 815 Score = 682 bits (1760), Expect = 0.0, Method: Composition-based stats. Identities = 122/519 (23%), Positives = 210/519 (40%), Gaps = 26/519 (5%) Query: 242 STNYTLSLLLPL--MMWGAMRYGYKLISLLWAVV-----LMISIHSYQNYIPIYPGYTTQ 294 T Y ++ + + + LW + + + IYP T Sbjct: 301 ITGYRSEEVIGKNPRILRSGHHDQGFYKQLWHQLETKGQWKGEFINRKKDGSIYPQLATI 360 Query: 295 LTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVR----ALNRALRD 350 + + ++I + + ++A ++QR+A+ DP+ +LPN L + + Sbjct: 361 SAVMDDKNHLINYICVFEDISV--RKAHEEKLQRMAFYDPLTNLPNRTHLLSLLEQHIET 418 Query: 351 APW----SALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLA 406 A +L I + + + G Q KL+ L +L V ++ G++ Sbjct: 419 GHKNQQTFATLFLDIDHFKHINDSMGHFCGDQLLSKLAIRLQDILHLNAHVARIGGDEFV 478 Query: 407 LRLNTESHQERITALDSHLK---QFRFFWDGM-PMQPQIGVSYCYVRSPVNHIYLLLGEL 462 + L + + Q F ++ + LL Sbjct: 479 IILPDVHSDVALLETVGDILSVFQQPFDLANHDSLRVSTSIGIALYPRDGQDSETLLKNA 538 Query: 463 NTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD 522 +T + + N + L + V + + L QA+E L QP + Sbjct: 539 DTA--MYLAKKNGRNGYAFYSPDLTDKSVSHVRIQSALHQAIEKQQLRLEFQPQYNLEQH 596 Query: 523 --VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAH- 579 V E LLR + L+ P F+P+A + GL SI WV+ H Q + Sbjct: 597 AIVGVETLLRWQHPEFGLVPPADFIPIAEKTGLIQSIGEWVLLHACQQGNAWLEQGVEFG 656 Query: 580 RFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQEL 639 R A+N+S + Q+ F +S +L + A +L E+TES L + +QA +L L+EL Sbjct: 657 RIAVNVSALQLQQSNFIQRLSDILNQTGFPAQRLDLEITESFLLIDPQQAIASLNQLREL 716 Query: 640 GCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKML 699 G +I++DDFGTGY+S + LK + + LKID SF+ ++ SNS IV +I + + + Sbjct: 717 GIEISLDDFGTGYSSLSYLKGLPINKLKIDRSFVSDVPSNSDSNAIVNAIIAMGKTLSLK 776 Query: 700 VVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLN 738 VVAE +E +E + + G Y QGYL +P Sbjct: 777 VVAEGIETQEQADYLFEKGCVYGQGYLFSRPVSAEKLFR 815 >UniRef50_Q2SFI2 FOG: EAL domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SFI2_HAHCH Length = 913 Score = 682 bits (1760), Expect = 0.0, Method: Composition-based stats. Identities = 116/533 (21%), Positives = 206/533 (38%), Gaps = 28/533 (5%) Query: 232 MPLNEKSTIFSTNYTLSLLLP--LMMWGAMRYGYKLISLLWAVV-----LMISIHSYQNY 284 + + T YTL + + + R+ LW + I + + Sbjct: 364 IVAVNNAFTDITGYTLDDVYGRNPRLQQSGRHDKTFYRSLWRSITEHGHWQGEIENKRRN 423 Query: 285 IPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRAL 344 IYP + + + V +++ + + + ++++ LA D + LPN Sbjct: 424 GEIYPAWQNINVVYDKNGNVANYVSVFSDISV--IKEKEKQLRHLANHDSLTGLPNRLLF 481 Query: 345 --------NRALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGED 396 RA R AL ++ + +++ G + ++ L + + Sbjct: 482 FNSLENSLERARRRRMEVALMFIDLDRFKIINDTMGHEAGDILLKTVARRLLEAVRGEDM 541 Query: 397 VYQLSGNDLALRLNTESHQERITALDSHLKQ---FRFFWDGMPMQPQIGVSYCYVRSPVN 453 V +L G++ + L S+ E A L + G + + + Sbjct: 542 VARLGGDEFTISLEELSNTEDAAAKAGKLIETIRQPVHIGGHEIVCSASIGIAIFPHDAD 601 Query: 454 HIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMA 513 + L + A + N L + + + + ++QALE N F L Sbjct: 602 NAQNLARAAD--AAMYRAKELHRNTFEFYTSELTERAIEHLTLSSEMRQALERNEFELYY 659 Query: 514 QPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAE 571 QP + V E LLR + LI+P F+ +A + L I WVI + +A Sbjct: 660 QPQFNLTSGRLVGAETLLRWRHPTRGLITPYCFINIAEDSALIDPIGGWVINQLCRDVAG 719 Query: 572 NRAKMPAH-RFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQL--IFEVTESNALTNVKQ 628 R A N+S + + L ++ +E L EVTE + ++ Sbjct: 720 WLKGGLKLPRIAFNVSSKQLEHYDVKGRIEHALQRWGLEPSDLDLELEVTEGAL-QHEER 778 Query: 629 AQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVAS 688 + L+ ++ LG +AIDDFGTGY+S +RLK++ D LKID FIR++ + + + + Sbjct: 779 SVEVLRQVRLLGLSVAIDDFGTGYSSLSRLKHMPIDTLKIDRMFIRDLPDDPNNQALASG 838 Query: 689 ICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIE 741 I L R + VVAE VEN E + D QG+L+ KP P ++ Sbjct: 839 IILLGRALGLKVVAEGVENVEQLRFLQERNCDEAQGFLLSKPLPKAAFEKMLK 891 >UniRef50_C6X7I8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X7I8_METSD Length = 821 Score = 681 bits (1758), Expect = 0.0, Method: Composition-based stats. Identities = 116/479 (24%), Positives = 205/479 (42%), Gaps = 19/479 (3%) Query: 278 IHSYQNYIPIYPGYTTQLTITSSSY-LVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVV 336 + +Y+ ++ + F+ + T R ++R A D + Sbjct: 338 LRNYRKDGSLFWNELYVAPVPDPHGGEPRYFVGVQKDI--TEIRQYQEALERQANYDTLT 395 Query: 337 HLPNVRALNRA--------LRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLS 388 L N L R ++ ++ I + + + G + + L L Sbjct: 396 GLANRNLLKERMQQAISEARRHNWTFSVAFIDIDNFKRVNDSMGHSAGDELIRLLGQRLQ 455 Query: 389 PLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLKQF---RFFWDGMPMQPQIGVSY 445 L G+ V +L G++ L L ++S E I + ++ F G + + Sbjct: 456 SCLRDGDTVARLGGDEFVLLLTSQSLDESIHTVVQRIRNTIINPFIITGRQLTVTCSIGL 515 Query: 446 CYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALE 505 + LL ++ + + N R A + EL ++++ N L ALE Sbjct: 516 ANFPHDGRNADTLLSNADSA--MYQAKASGSNNFRFYAKEMNAELGHRLSLENDLWHALE 573 Query: 506 HNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIE 563 + L QP MR + E L+R + +I P F+P++ + GL I +WV+E Sbjct: 574 NQQLVLHYQPQVCMRNSQIIGMEALIRWQHPKLGMIPPLQFIPLSEDDGLIVPIGIWVME 633 Query: 564 HTLQFMAENR-AKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNA 622 + + A P R A+NLS + Q + + L ++ L E+TES Sbjct: 634 TAAHQNRQLQLAGYPPIRVAVNLSVRQLEQKDLVHCIEKTLQHSGLDPQCLELEITESML 693 Query: 623 LTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLD 682 + N++++ ITL + +LG Q+++DDFGTGY+S + LK + + LKID SFI +I + D Sbjct: 694 MHNIEESIITLNRISDLGVQLSLDDFGTGYSSLSYLKRLPINRLKIDKSFINDITTTYND 753 Query: 683 YQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIE 741 I SI LA ++ V+AE VE+ + +L G D +QGYL+ +P+P + + Sbjct: 754 AIIARSIIALAHSLEIQVIAEGVESADQYAFLLENGCDEVQGYLLSRPRPFEEMEALLR 812 >UniRef50_C9Y9D8 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y9D8_9BURK Length = 897 Score = 681 bits (1758), Expect = 0.0, Method: Composition-based stats. Identities = 114/479 (23%), Positives = 200/479 (41%), Gaps = 25/479 (5%) Query: 277 SIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVV 336 ++ I P + I +F+V + T+QR I+RLA+ DP+ Sbjct: 414 EVNGRHANGAIRPISVSASRI--PHTEHDTFVVTLRDI--TQQRQDEEEIRRLAFYDPLT 469 Query: 337 HLPNVRALNRALRD--------APWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLS 388 LPN R L +R AL +L + ++L G + + Q++++ L Sbjct: 470 GLPNRRLLMDRVRQAMVNSARLGQHGALMFLDLDHFKLLNDTLGHDVGDELLQQVAYRLR 529 Query: 389 PLLEPGEDVYQLSGNDLALRLNTESHQE-----RITALDSHLKQ---FRFFWDGMPMQPQ 440 + G+ V +L G++ + L S + + + + G Sbjct: 530 NCVREGDSVARLGGDEFVVLLEGLSDNRTDAANQAEVVAHKILDALALPYSLRGHGYNST 589 Query: 441 IGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRL 500 + + LL + + + A N R +Q + + + Sbjct: 590 PSIGIVVFMEDHETMDDLLKKADVA--MYQAKAAGRNTARFFDPVMQAAVTTHAELAKEI 647 Query: 501 QQALEHNHFFLMAQPITGMRGD-VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDM 559 + L+ + F L Q +G E L+R L+SP F+P+A E G+ + Sbjct: 648 RLGLQRHEFVLHYQVQIDSQGRCTGAEALVRWNHRVRGLVSPAHFIPLAEETGMILPLGE 707 Query: 560 WVIEHTLQFMAENRAK--MPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEV 617 WV+E Q + E A+N+S + + Q F V + L + A QL E+ Sbjct: 708 WVMESACQQLVEWSRNPMTAHWTLAVNVSASQLAQPEFVASVREALQRSGAPAGQLKLEL 767 Query: 618 TESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIV 677 TES + +V+ + + ++ELG ++DDFGTGY+S + LK + LKID SF+R+++ Sbjct: 768 TESMLVDDVEDIIVKMMAIKELGVSFSLDDFGTGYSSLSYLKRLPLSQLKIDQSFVRDVL 827 Query: 678 SNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDT 736 ++ D I ++ L + V+AE VE E R+A+ ++ D QGY G+P P Sbjct: 828 TDPSDAVIARTVVALGHSLGLTVIAEGVETAEQRDALAAMQCDAFQGYYFGRPAPADAL 886 >UniRef50_B8GMU1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GMU1_THISH Length = 862 Score = 680 bits (1755), Expect = 0.0, Method: Composition-based stats. Identities = 106/459 (23%), Positives = 190/459 (41%), Gaps = 18/459 (3%) Query: 297 ITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRDA----- 351 + + T + R++ LA DPV LPN L+ A Sbjct: 408 VYDDEGKPLLLRGTAQDI--TERHDYQNRLRHLANFDPVTGLPNRTLFKDRLQHALANAT 465 Query: 352 ---PWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALR 408 AL +L + + + + G M+ + ++ + L + G+ V + G++ + Sbjct: 466 RNQRLVALLFLDMDQFKNVNDSLGHMMGDELLRQTAERLLGCVREGDTVARFGGDEFIIL 525 Query: 409 LNTESHQERITALDSHLKQF---RFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTV 465 L H E+ + + Q F + + H L+ ++ Sbjct: 526 LENIEHSEQASLSAERVVQAMRRPFRLGEHEHFCNVSIGISLYPEDDEHPEDLVRHADSA 585 Query: 466 AELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--V 523 + + R + +++ + N+L QALE F + QP +R Sbjct: 586 --MYLAKAQGGAGYRFYTPDMNTRAMERLLLQNQLHQALELGQFQVHYQPQMDLRSGRIC 643 Query: 524 YHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRA-KMPAHRFA 582 E L+R + L+ P F+P+A + GL + WV+ + + + +PA + Sbjct: 644 GVEALVRWQHPERGLVPPAEFIPMAEDTGLIEPLGEWVLRTAAREVRGWQDRGLPALNLS 703 Query: 583 INLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQ 642 +NLSP P V ++LA+ +EA +L E+TE + +++ TL + LG + Sbjct: 704 VNLSPRQFRHPDLPGMVERVLAESGLEAERLELEITERLIIVDLEHTVDTLSRIARLGVR 763 Query: 643 IAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVA 702 ++IDDFGTG++S A LK + LKID F+ I +S D I ++ L R ++ V+A Sbjct: 764 VSIDDFGTGHSSLAYLKRLPVHALKIDREFVDGIGQDSDDAAIAEAVIALGRTLRLQVIA 823 Query: 703 EYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIE 741 E VE E + G D +QG+ I +P P + + Sbjct: 824 EGVETREQASFLREHGCDAVQGFFIARPMPAGELTGWLS 862 >UniRef50_A1TI51 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=15 Tax=cellular organisms RepID=A1TI51_ACIAC Length = 1499 Score = 680 bits (1755), Expect = 0.0, Method: Composition-based stats. Identities = 109/490 (22%), Positives = 190/490 (38%), Gaps = 24/490 (4%) Query: 271 AVVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLA 330 I + I + + + +++A R IQRLA Sbjct: 1007 QGEWAGEIVQFHRDGRRLDVEGRWTLIQGEQGQPDAILAIDTDIG--QRKATEREIQRLA 1064 Query: 331 YVDPVVHLPNVRALNRALRDA--------PWSALCYLRIPGMEMLVKNYGIMLRIQYKQK 382 + D + LPN L +R A AL ++ + + L G Q+ Sbjct: 1065 FYDSLTGLPNRMLLMDRMRHALATAQRRRQGGALLFIDLDNFKTLNDTLGHDQGDVLLQQ 1124 Query: 383 LSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQE-----RITALDSHLKQF---RFFWDG 434 ++ L+ + + V +L G++ + + S + + + G Sbjct: 1125 VAARLNTCVRSVDTVARLGGDEFVVMIEGLSTHPGELAMSARTVGEKILAVLATPYVLQG 1184 Query: 435 MPMQPQIGVSYCYV-RSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDK 493 + + + + LL + + + A N R +Q + + Sbjct: 1185 YHYRSTPSIGVAPFGDGRTSTVGELLKQADLA--MYQAKTAGRNTLRFFDPGMQAVVTAR 1242 Query: 494 VAMMNRLQQALEHNHFFLMAQPITGMRGDV-YHEILLRMKGENDELISPDSFLPVAHEFG 552 + N L+ AL F L QP RG V E L+R ++SP F+P+A E G Sbjct: 1243 AELENDLRTALAREQFMLHYQPQIDRRGSVTGVEALVRWPHPQRGMVSPGEFIPLAEETG 1302 Query: 553 LSSSIDMWVIEHTLQFMAENR--AKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEA 610 L + WV+ +A + A+N+S F +V + + A Sbjct: 1303 LVLPLGRWVLHTACAQLARWQHVPGRGHLSMAVNVSSRQFHHEAFVEDVVRAITATGAPA 1362 Query: 611 WQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDG 670 +L E+TES + +++ T+ L+ G ++DDFGTGY+S + LK + D LKID Sbjct: 1363 SRLKLELTESLFVEDMETTIATMAALRSHGVGFSLDDFGTGYSSLSYLKRMPLDQLKIDQ 1422 Query: 671 SFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKP 730 SF+R+++++ D IV +I L+R + V+AE VE E R + G QGY +P Sbjct: 1423 SFVRDLLADPNDAAIVDTIIALSRSLGLDVIAEGVETAEQRTRLEQAGCRAYQGYFFSRP 1482 Query: 731 QPLIDTLNEI 740 P + + Sbjct: 1483 LPETALEDFL 1492 >UniRef50_Q1K234 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K234_DESAC Length = 766 Score = 679 bits (1754), Expect = 0.0, Method: Composition-based stats. Identities = 107/522 (20%), Positives = 205/522 (39%), Gaps = 32/522 (6%) Query: 242 STNYTLSLLLPLMMWGAMRYGYKLISLLWAVVL---------MISIHSYQNYIPIYPGYT 292 S Y+ S L L +W + WA + + I+P Sbjct: 244 SLGYSASELESLHLWD---IDPDFPAERWAEQWERMKSDPKQVFETRHQRKDGRIFPVEV 300 Query: 293 TQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRDAP 352 + ++ + + + T ++ + ++ + D + L N L+ ++ A Sbjct: 301 SASQCLFNNEE--NHVAFVRDI--TIRKKYEKELEHQSNHDALTGLANRVLLDDRIQQAI 356 Query: 353 WSA--------LCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGND 404 A + L + +++ + G ++ LS + PG+ + +L G++ Sbjct: 357 VHAERAQRNTAVFLLDLDRFKVINDSLGHSQGDAVLLAVAERLSACISPGDTLSRLGGDE 416 Query: 405 LALRLNTESHQERITALDSHLK---QFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGE 461 A+ + +H + + + F ++ + LL Sbjct: 417 FAIVMTHVNHPADARIMAQKILNAFEQPFPLGNRELRITTSIGASLYPRDGEQSEDLLRH 476 Query: 462 LNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRG 521 + A + N + + + + + L+QAL+ F L QP + Sbjct: 477 AD--AAMYQAKKQGGNGFQFCSEEMDTRAHKALELEGDLRQALQLGSFVLHYQPKVKIAS 534 Query: 522 DV--YHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRA-KMPA 578 E L+R + +ISPD F+P+A E GL ++ WV+ + +A +P Sbjct: 535 GKIDGCEALVRWNHPDKGMISPDDFIPLAEETGLIIALGEWVLREACRQFKAWQAQGLPP 594 Query: 579 HRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQE 638 + A+NLS Q+ F + +L ++ I+ L E+TES + + + L L++ Sbjct: 595 IKIAVNLSARQFLQSDFVESIQTILHEFDIDPHWLDLELTESMVMEDPDRIAKLLAELKQ 654 Query: 639 LGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKM 698 +G +++DDFGTGY+S L+ D LKID SFI ++ S++ + S+ +A + Sbjct: 655 IGFALSLDDFGTGYSSLNYLRRFPIDCLKIDRSFILDVASDATAASVANSVIGIAHSLGI 714 Query: 699 LVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEI 740 +AE VE E + D +QGYL KP P D + Sbjct: 715 HAIAEGVETREQYAFLAMCECDSIQGYLFSKPLPANDLAALL 756 >UniRef50_C6MIL1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MIL1_9PROT Length = 576 Score = 679 bits (1754), Expect = 0.0, Method: Composition-based stats. Identities = 114/498 (22%), Positives = 207/498 (41%), Gaps = 29/498 (5%) Query: 255 MWGAMRYGYKLISLLWAVVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAV 314 ++ + +W +L + +T + I +S I ++ + Sbjct: 89 VFESGCQ-IDFEETMWNSMLK---QNRM-------VHTFKKPICDTSGKPLYLIGMFVDI 137 Query: 315 LATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL--------RDAPWSALCYLRIPGMEM 366 T + +RI +A D + LPN L + R+ AL ++ + ++ Sbjct: 138 --TERHRAEQRILEMATYDILTGLPNRALLKDRIERALEHGNRNRQRVALLFIDLDNFKV 195 Query: 367 LVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLK 426 + + G + + Q ++ ++ + V + G++ + L+ A+ + Sbjct: 196 INDSLGHDVGDKLLQAVAARFVSIVRGEDTVARQGGDEFIVLLSNLESAFDAEAVAQKIL 255 Query: 427 ---QFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGA 483 Q F DG + + I+ LL + + N Sbjct: 256 NALQLHFLIDGKELHISGSIGISLFPDDGEDIWTLLRNSDIA--MYHAKKNGRNNCEFFK 313 Query: 484 MYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDV--YHEILLRMKGENDELISP 541 + R+ K++ +M L+ AL+ + L QPI + G E+LLR + D LI P Sbjct: 314 PEMNRQAKERHSMEVALRNALKRDELLLHYQPIVNVNGGKADGFEVLLRWQHPGDGLIYP 373 Query: 542 DSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAH-RFAINLSPTSVCQARFPVEVS 600 F+ +A E G+ I W++ + + + + R AINLS Q + Sbjct: 374 VKFIRLAEETGMIIPIGEWLMRQSCLQIKAWQEQGYEVPRLAINLSAIQFRQKTLMENIV 433 Query: 601 QLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKN 660 ++L + + L E+TES + +V++ TL+ L ELG +I+IDDFGTGY++ + LK Sbjct: 434 RILDETGVTGHYLTLEITESELIEDVEETIKTLRQLSELGIEISIDDFGTGYSNLSFLKR 493 Query: 661 VNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGID 720 + LKID SF+R+I + D I+ +I +A + V+AE VENE+ + G Sbjct: 494 YQINTLKIDRSFVRDIPDDPDDTAIIDAILVMAHALGLQVIAEGVENEQQLAYLALHGCT 553 Query: 721 YMQGYLIGKPQPLIDTLN 738 QG+ KP P I+ Sbjct: 554 RFQGFYFSKPLPAIEIEK 571 >UniRef50_B5VXY3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Arthrospira RepID=B5VXY3_SPIMA Length = 1092 Score = 679 bits (1752), Expect = 0.0, Method: Composition-based stats. Identities = 99/532 (18%), Positives = 198/532 (37%), Gaps = 25/532 (4%) Query: 232 MPLNEKSTIFSTNYTLSLLLPL--MMWGAMRYGYKLISLLWAVV-----LMISIHSYQNY 284 + T Y ++ + + +LW + H+ + Sbjct: 563 IQYVNPKFEEITGYKAGEVIGQNPRILKSGYTTEPEYDVLWRQITSGKQWSGEFHNKKKN 622 Query: 285 IPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRAL 344 ++ + + + + FI + T+Q+ + A D + LPN + Sbjct: 623 GELFWEHASICPMRDEEGYITHFIAVKEDI--TQQKHNEEILAHQANYDALTDLPNRTLI 680 Query: 345 NRALR--------DAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGED 396 LR A+ ++ + + + G L ++ L + + Sbjct: 681 FDRLRQAITEAQVHHSNVAVMFIDLDHFKNINDTLGHELGDFLLKEAGMRLRGCIRKTDT 740 Query: 397 VYQLSGNDLALRLNTESHQERITALDSHLKQF---RFFWDGMPMQPQIGVSYCYVRSPVN 453 V +L G++ L + + + + + F G + Sbjct: 741 VGRLGGDEFLLIIPKLDDLVQAEYIANQVLDVLGEPFNLCGEEAFISASIGIASYPQDGK 800 Query: 454 HIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMA 513 ++ L+ +T + N+ + E + ++ + N+L+ A+ N ++ Sbjct: 801 NVSTLVRNADTA--MYAAKQEGRNVFAFFTQNMNDEAQSRIIIENQLRHAISRNELSVVY 858 Query: 514 QPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMA- 570 QP + V E L+R I PD F+ +A E L + W++ Q +A Sbjct: 859 QPFIHLNTSQIVGAEALMRWYNPELGNIRPDQFIAIAEESRLIVDLGEWILSQACQEVAN 918 Query: 571 ENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQ 630 ++ A+N+SP + + + +A + + L E+TE + + V Q Sbjct: 919 WHQQGNNGLWVAVNMSPRQLRTPNLVNVIIEAIANNGLSSDCLELEITERSLVEEVPGVQ 978 Query: 631 ITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASIC 690 ++ L L ++AIDDFGTGY+S + LK +LKID SFI ++ + +V ++ Sbjct: 979 SLIKQLNHLKIRLAIDDFGTGYSSLSYLKRFPFSVLKIDKSFISDLPDDQDAIALVKTMI 1038 Query: 691 HLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEP 742 +A ++VVAE +E + + + G DY QGYL KP P ++ Sbjct: 1039 TMAHGLGLVVVAEGIETTAQLDFLCNQGCDYGQGYLFSKPLPPAQFRAYLQR 1090 >UniRef50_C5V294 Diguanylate cyclase/phosphodiesterase with PAS/PAC and MHYT sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V294_9PROT Length = 1157 Score = 678 bits (1750), Expect = 0.0, Method: Composition-based stats. Identities = 112/537 (20%), Positives = 210/537 (39%), Gaps = 38/537 (7%) Query: 236 EKSTIFSTNYTLSLLLPL--MMWGAMRYGYKLISLLWAVV-----LMISIHSYQNYIPIY 288 + T Y+ S ++ + + ++ +L+W + I + + IY Sbjct: 619 NNAFTQLTGYSASEVIGQTPRLLSSGQHDAVFYALMWQSINETGKWAGEIWNRRKNGEIY 678 Query: 289 PGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRAL---- 344 P Y + S +V +++ + + + +A IQ LA+ D + Sbjct: 679 PEYLAITAVKDESGVVNNYVATFNDI--SDSKAATNEIQLLAFYDALTG----LPNRRLL 732 Query: 345 --------NRALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGED 396 ++R AL + + + L + G + ++++ L+ + G+ Sbjct: 733 LDRLLQALASSVRSNRMGALLLIDLDNFKTLNETMGHDIGDLLLRQVAERLTACVRNGDT 792 Query: 397 VYQLSGNDLALRLNTESHQER-----ITALDSHLKQ---FRFFWDGMPMQPQIGVSYCYV 448 V +L G++ + L Q T + + + + + Sbjct: 793 VARLGGDEFIVMLEEIGAQTVDSVTHTTTIAEKILNSLNLPYRLEKHECHSTPSIGATLF 852 Query: 449 RSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNH 508 L+ +++ + A N R +Q + + ++ L+ AL ++ Sbjct: 853 SGTQQSADELMKQVDIA--MYQAKQAGRNGLRFFDSKMQDAISARASLEADLRVALINSE 910 Query: 509 FFLMAQPITG-MRGDVYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQ 567 F L Q + + E+L+R ++SP F+P+A E GL + WV++ Sbjct: 911 FQLHYQIQVNSLGAALGAEVLIRWMHPQRGMVSPAQFIPLAEESGLILPVGEWVLKTACH 970 Query: 568 FMAENRAK--MPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTN 625 + + A+N+S QA F V + L L E+TES L N Sbjct: 971 QLKVWQDNALTRELTLAVNVSSKQFRQAEFVELVKKTLQSSGANPSLLKLELTESLLLEN 1030 Query: 626 VKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQI 685 + + + L+ +G +IDDFGTGY+S +K + D LKID SF+R+I+ ++ D I Sbjct: 1031 IDEIIAKMNELKLMGIHFSIDDFGTGYSSLQYIKRLPLDQLKIDQSFVRDIMDDNNDAAI 1090 Query: 686 VASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEP 742 V +I ++ + V+AE VE E R + S G QGYL KP PL + Sbjct: 1091 VQTIIAMSDALGLNVIAEGVETREQRAFLDSHGCHTFQGYLFSKPIPLEQFEILLAT 1147 >UniRef50_Q2RRN9 Sensor protein n=3 Tax=Proteobacteria RepID=Q2RRN9_RHORT Length = 1301 Score = 678 bits (1750), Expect = 0.0, Method: Composition-based stats. Identities = 125/582 (21%), Positives = 231/582 (39%), Gaps = 34/582 (5%) Query: 189 VVRNPFYLRSYYSQLKQQVDAKVTKKEFALWLLALGALLLLLC--------MPLNEKSTI 240 +VR+ +Y+ + + + ++ + L A+ + + + + Sbjct: 721 LVRDIHNAPAYFISVVENIQSRKEAELQLLLASAVFSNSMEGIFVTDLKGSILAVNPAFS 780 Query: 241 FSTNYTLSLLLP--LMMWGAMRYGYKLISLLWA-----VVLMISIHSYQNYIPIYPGYTT 293 T Y + +L + + R + LW I + + ++P + + Sbjct: 781 QITLYEAAEVLGRNARILQSGRQNREFYVALWQDVLTIGSWRGEIWNRRRDGEVFPEWLS 840 Query: 294 QLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRAL--------N 345 ++ + V ++I + + +R + + LA+ DP+ LPN L Sbjct: 841 ISSVRNHQGEVTNYIGIFSDL--SRIKHSEAKFHHLAHHDPLTGLPNRLLLRSRLDHAIE 898 Query: 346 RALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDL 405 RA R A+ +L + +M+ + G + L L+ L + +L G++ Sbjct: 899 RARRTGGRCAVLFLDLDRFKMINDSLGHRAGDTLLRTLGARLTACLGDTGTLARLGGDEF 958 Query: 406 ALRLNTESHQERITALD----SHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGE 461 + + + L++ +G + V ++ LL Sbjct: 959 VAVIEDIDGIPAVGTIALTMLERLREPCRLSEGPEVCIGGSVGISLFPEDGDNPDTLLQH 1018 Query: 462 LNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRG 521 +T L V A L + ++ + L+ ALE F L QP+ + Sbjct: 1019 ADTA--LGQVKGAGGGAYGFYTRTLTERISARLGLEAGLRHALEQGDFLLHYQPLIALGT 1076 Query: 522 DV--YHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAH 579 E L+R G + LI PD F+P+A + GL + WV+ + M R++ Sbjct: 1077 GEVEGVEALVRWAGGDGLLIPPDRFIPLAEDTGLIVPLGEWVLGEACRTMQRWRSQGMPL 1136 Query: 580 RF-AINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQE 638 A+NLSP P V ++L + + A L E+TES + A+ + L+ Sbjct: 1137 TVLAVNLSPRQFRDHAIPALVRRVLEQTGLPASVLELEITESAIMEQGAAAEAQMTGLKH 1196 Query: 639 LGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKM 698 LG ++AIDDFGTGY+S A L+ D +KID SF+R+I ++ +I A+I + R K+ Sbjct: 1197 LGVRLAIDDFGTGYSSLANLRRFPIDKIKIDQSFVRDIPRDAAAEEITATIIAMGRTLKL 1256 Query: 699 LVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEI 740 V+AE VE + + + D QGYL +P + Sbjct: 1257 HVLAEGVETTDQLDFLSRKQCDSAQGYLFSRPITAAALEKWL 1298 >UniRef50_D1T5E1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1T5E1_9BURK Length = 1055 Score = 677 bits (1749), Expect = 0.0, Method: Composition-based stats. Identities = 110/531 (20%), Positives = 208/531 (39%), Gaps = 25/531 (4%) Query: 231 CMPLNEKSTIFSTNYTLSLLLP--LMMWGAMRYGYKLISLLWAVV-----LMISIHSYQN 283 + + + T Y L ++ + + ++L+ + + + +Y+ Sbjct: 518 LIEYVNPAFMRITGYDLDEVIGHDCRVLQRDDRDQEGVALIREALAANREVSAVVRNYRK 577 Query: 284 YIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRA 343 ++ + ++ ++ I V T +++ A D + LPN Sbjct: 578 DGALFWNQLFIAPVPNAEGVITHHIGVINDV--TELIRYQEQLEYQANYDGLTRLPNRNL 635 Query: 344 LNRAL--------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGE 395 L L R A+ +L + G + + + G + + ++ L+ + Sbjct: 636 LRDRLEHALVVAQRHHTGVAVVFLDLDGFKNVNDSLGHSVGDRLLGVVAERLARCSRTSD 695 Query: 396 DVYQLSGNDLALRLNTESHQERITALDSHLKQ---FRFFWDGMPMQPQIGVSYCYVRSPV 452 V + G++ + + ++ + ++ + DG + + Sbjct: 696 TVARHGGDEFVIVMTDTVDEQSLITWMERVRASIAEPVWLDGTELYVGCSMGASLFPQDG 755 Query: 453 NHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLM 512 + L+ + + + + N + + ++ + RL++AL N F L Sbjct: 756 DDAETLMKKADVA--MYRAKDMGRNTFQFYQPEMNASAGARLNLERRLRRALRDNEFLLH 813 Query: 513 AQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMA 570 QP + V E L+R L+ P SF+P+A E GL + WV+ + Sbjct: 814 YQPQVDIVSGQIVGIEALVRWHDPEAGLVPPSSFIPLAEESGLIGPLSEWVLREACRQNK 873 Query: 571 ENR-AKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQA 629 + +P R ++NLS Q V Q+LA+ +E L E+TES + N ++A Sbjct: 874 AWQDQGLPPARVSVNLSARVFQQRNIAKLVMQVLAETGLEPRYLELELTESTIMRNAEEA 933 Query: 630 QITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASI 689 + L L LG +AIDDFGTGY+S + LK D LKID SF+ +I + D I ++I Sbjct: 934 VLMLNELHALGIGLAIDDFGTGYSSLSYLKRFPVDRLKIDRSFVSDIGVSGDDETITSAI 993 Query: 690 CHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEI 740 LA K+ V+AE VE + + D MQG+ KP + Sbjct: 994 IALAHSLKLQVIAEGVETSAQLDFLKERACDEMQGFYFAKPLSTEGISELL 1044 >UniRef50_B6AQA1 Diguanylate cyclase/phosphodiesterase n=2 Tax=Leptospirillum sp. Group II RepID=B6AQA1_9BACT Length = 702 Score = 677 bits (1749), Expect = 0.0, Method: Composition-based stats. Identities = 125/715 (17%), Positives = 248/715 (34%), Gaps = 82/715 (11%) Query: 82 FYETLSLTANFIIIIILCWGGYRVFTPRRNNVSHGDTRLISQRIFWQIVFPATLFLILFQ 141 Y ++ + I + + + S + R+ W Sbjct: 6 SYNFWLVSLSVFIAVTAAYTSFSF-------ASRITSTSGKIRLLWLGG---------GS 49 Query: 142 FAAFVGLLASRENLVGVMPFNLGTLI--NYQALLVGNLIGVPLCYFIIRVVRNPF----- 194 A VG+ + +G++ F + + + + L+ L+ + + F +R+ P Sbjct: 50 VAMGVGIWSMH--FIGMLAFRMPFPVHYDVRTTLLSLLMAIVVSGFALRMTSLPRIGPAN 107 Query: 195 ----------------YLRSYYSQLKQQVDAKVTKKEFALWLLALGALLLLLCMPLNEKS 238 Y ++ + ++ + + L + Sbjct: 108 LLMAGTLMGLGIGAMHYTGMMAMEMPMAIRYDPFLVFLSILIAVSASTAALRIVSTLRSD 167 Query: 239 TIFSTN---YTLSLLLPLMMWGAMRY-----GYKLISLLWAVVLMISIHSYQNYIPIYPG 290 + + +L++ + + + + + L Sbjct: 168 VAVADMPKKFLSALIMGAAI--SGMHYTGMAAARFPLRMSGTPL--------KNSSDAWL 217 Query: 291 YTTQ-------LTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRA 343 T L I LV S + A L +A ++ LA D + LPN Sbjct: 218 AVTIGLASFMILAIGLILSLVDSHLATRTAGLVGSLKAANEKLHYLALHDGLTRLPNRTL 277 Query: 344 LNRALRDAPWSA--------LCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGE 395 L + A A + +L + + + + G + Q+++ LS + P + Sbjct: 278 LEDRVDQAIRHARGVDGAFSVFFLDVDRFKPINDSLGHSTGDKVLQQMARRLSGTVGPED 337 Query: 396 DVYQLSGNDLALRLNTESHQERITALDSHLKQF---RFFWDGMPMQPQIGVSYCYVRSPV 452 V ++ G++ + + ++ + ++ DG + + Sbjct: 338 TVARIGGDEFVIVFPEQKDPGKVHEIARKIRDCVAENMEVDGQSLSVTTSIGISLFPHDG 397 Query: 453 NHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLM 512 LL ++ + + + + L ++ M N L++ +E F L Sbjct: 398 TTFRTLLASADSA--MYYAKSKGSGQIQFYSGELNDSAALRIEMENDLRRGIEKEEFVLY 455 Query: 513 AQPITGMRGDV--YHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMA 570 QP + E L+R ++ P F+P A E GL + W+++ + Sbjct: 456 YQPKVTLATGEVESVEALVRWNHPEKGILPPHYFIPRAEETGLIIPLGRWIMDRACREAV 515 Query: 571 ENR-AKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQA 629 + A R A+NLS E+ L + L E+TES + + + A Sbjct: 516 IWQQAGFSRLRVAVNLSALQFINQDLMKEILDALESSGLPPECLELEITESLLMEDPEGA 575 Query: 630 QITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASI 689 TL +++ G +AIDDFGTGY+S++ LK D LKID SFI +I N D IV +I Sbjct: 576 MRTLSGIRQKGVHVAIDDFGTGYSSFSYLKKFPLDRLKIDRSFITDICDNPNDAAIVRTI 635 Query: 690 CHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIR 744 L + V+AE VE++ E + ++ D QG+ +P P + ++ +R Sbjct: 636 ITLGHNLNLKVIAEGVESQAQLEMLKAMECDAYQGFFNSRPLPPGELAERLKEMR 690 >UniRef50_Q3SK01 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC and GAF sensor(S) n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SK01_THIDA Length = 1059 Score = 677 bits (1748), Expect = 0.0, Method: Composition-based stats. Identities = 109/486 (22%), Positives = 184/486 (37%), Gaps = 21/486 (4%) Query: 271 AVVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLA 330 I + + + + + V T ++A ++ +LA Sbjct: 560 HSEWNGEITQLRKDGTALVVEAHWTLLRDENDQPDAILAINTNV--TERKAAEHKVHQLA 617 Query: 331 YVDPVVHLPNVRALNRAL------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLS 384 + DP+ LPN L L R AL + + + L G + Q+++ Sbjct: 618 FYDPLTGLPNRELLGDRLQHAMQVRHGQVGALLLIDLDNFKTLNDTLGHAMGDLLLQQIA 677 Query: 385 HWLSPLLEPGEDVYQLSGNDLALRLNTESHQER-----ITALDSHLKQ---FRFFWDGMP 436 L L G+ + ++ G++ + L S T + + F Sbjct: 678 QRLQTCLRKGDTLARVGGDEFVIVLEGLSASPGDAGSLATRVGEKILASFARPFQLADYV 737 Query: 437 MQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAM 496 + + L + + N R +Q + + + Sbjct: 738 HHCTASIGITLFNDRPTTLDELRKRADLA--MYQAKAHGRNALRFFDPAMQAVVAARAEL 795 Query: 497 MNRLQQALEHNHFFLMAQPITGMRGDV-YHEILLRMKGENDELISPDSFLPVAHEFGLSS 555 L++AL F L Q RG V E LLR + I+P SF+P+A E GL Sbjct: 796 EVDLREALRLGAFELHYQAQVDARGCVSGAEALLRWQHPQRGWIAPASFIPLAEETGLIL 855 Query: 556 SIDMWVIEHTLQFMAENRA--KMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQL 613 + +WV++ + M A+N+S QA F +V + + + +L Sbjct: 856 PLGLWVLDVACAQLVAWSKMPHMARLSLAVNVSARQFRQADFAAQVLAAIERSGADPRRL 915 Query: 614 IFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFI 673 E+TES L N+ + + L+ G ++DDFGTGY+S A LK + D +KID SF+ Sbjct: 916 KLELTESLMLDNLDDTILKMSALKAHGIGFSLDDFGTGYSSLAYLKRLPLDEIKIDQSFV 975 Query: 674 RNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPL 733 R+++ ++ D I SI L + + VVAE VE + + G QGYL +PQP Sbjct: 976 RDVLIDANDASIARSILALGQSLNLEVVAEGVETDAQHAFLAEHGCQAYQGYLFNRPQPA 1035 Query: 734 IDTLNE 739 Sbjct: 1036 RQFEAW 1041 Score = 49.6 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 15/132 (11%), Positives = 37/132 (28%), Gaps = 22/132 (16%) Query: 232 MPLNEKSTIFSTNYTLSLLLP--LMMWGAMRYGYKLISLLWAVV-----LMISIHSYQNY 284 + + T Y +L + + + + + + + +Y + Sbjct: 55 IVFVNDAFEHITGYRRDEVLGKSVRLLHGPLTDRAEVRRIGEALENQRPVRSELVNYSKH 114 Query: 285 IPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRAL 344 + + +T ++ + V TR++ + RL N Sbjct: 115 GEPFWLELDVVPVTDANGYYTHCVAVERDV--TRRKEADLELARL----------NRAL- 161 Query: 345 NRALRDAPWSAL 356 +R A AL Sbjct: 162 --RVRSACNKAL 171 >UniRef50_A4TX60 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TX60_9PROT Length = 961 Score = 677 bits (1748), Expect = 0.0, Method: Composition-based stats. Identities = 108/473 (22%), Positives = 198/473 (41%), Gaps = 18/473 (3%) Query: 279 HSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHL 338 H+ + ++ + S +V + T ++ R++ +A+ DP+ L Sbjct: 486 HARRLDGSLFWVEVSMRLARFSDGQ-NRLLVVVRDI--TERKNAQDRLEFMAHHDPLTEL 542 Query: 339 PNVRALNRAL--------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPL 390 PN L + R+ AL +L + + + + G + + ++ L Sbjct: 543 PNRLLLQDRVDRAIALAEREGRRVALMFLDLDQFKTVNDSLGHAAGDRLLKDVAWRLRQC 602 Query: 391 LEPGEDVYQLSGNDLALRLNTESHQERITALDSHLK---QFRFFWDGMPMQPQIGVSYCY 447 + + + +L G++ + LN + + + + +G + + + Sbjct: 603 VRESDTIARLGGDEFVIVLNAVRDADGVVEVAEKIHKSVAPPITIEGQEVTSTLSMGIAM 662 Query: 448 VRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHN 507 + L+ + + A + + + R A + + +A+ + L +ALE Sbjct: 663 FPEDGHDFDTLMKKAD--AAMYHAKESGRSTYRFFAARMNADAVAHLALRSGLHRALERG 720 Query: 508 HFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHT 565 F L QP + G V E L+R L+SP F+PVA + GL + WV+ Sbjct: 721 EFQLYFQPQVSLTGGAVVGAEALIRWNHPERGLVSPAEFIPVAEDSGLIVPMGDWVLRQA 780 Query: 566 LQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTN 625 + A +A A A+NLS + V + L + + L E+TES + + Sbjct: 781 CRQAALWQAGGHALTMAVNLSALQFRRGDLERAVREALEESGLAPHSLELELTESIMIQD 840 Query: 626 VKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQI 685 + + L LG Q++IDDFGTGY+S A LK D LKID SF+R++ +++ + I Sbjct: 841 HEAVMDMTRRLGALGVQLSIDDFGTGYSSMAYLKRFAVDKLKIDQSFVRDVHTDTDNAAI 900 Query: 686 VASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLN 738 +I +A K+ V+AE VE E+ E + G D QG+L G+P Sbjct: 901 TQAIIQMAHSLKLEVIAEGVEVTEVVEFLRDHGCDLAQGFLYGRPMTAQRFEK 953 >UniRef50_Q3A628 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A628_PELCD Length = 1063 Score = 677 bits (1747), Expect = 0.0, Method: Composition-based stats. Identities = 110/487 (22%), Positives = 189/487 (38%), Gaps = 19/487 (3%) Query: 271 AVVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLA 330 V Q + + + S + A+ T +R +I++LA Sbjct: 571 RGVWRGEGRGKQKNGNGFDVELQAQVVKDQNGGPLSILA--SAIDITDKRKTELQIKKLA 628 Query: 331 YVDPVVHLPNVRALNR--------ALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQK 382 Y D + LPN L A R + A+ L + + + G + Sbjct: 629 YFDSLTGLPNRTLLKDHMELALGQARRLNKFVAVLLLDLDNFKHINDTLGHATGDLLIRS 688 Query: 383 LSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSH----LKQFRFFWDGMPMQ 438 ++ L + + + G++ L L + T+ L + F + Sbjct: 689 VAERLRTECRTCDTLARWGGDEFVLLLTDLDDIQNTTSATEKFMALLTERPFATSECDIN 748 Query: 439 PQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMN 498 + LL +T + N ++ L + + + M Sbjct: 749 TTASIGIALYPQDGQDPETLLKRADTA--MYEAKKNGRNGYHFFSLQLAEQAERRHRMEI 806 Query: 499 RLQQALEHNHFFLMAQPITGMR--GDVYHEILLRMKGENDELISPDSFLPVAHEFGLSSS 556 L+ AL+ L+ QP + E LLR + + ISP F+P+A E GL Sbjct: 807 NLRSALKEGEMQLVYQPQIDLGKVRITGMEALLRWQSPEEGTISPARFIPLAEETGLIYP 866 Query: 557 IDMWVIEHTLQFMAENRA-KMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIF 615 + WV++ + A + + A+NLS Q + ++L + + L Sbjct: 867 LGEWVLQQACRQGAIWQKTEASPLCVAVNLSAKQFHQPDLAKNIKKILRETGLSPHLLEL 926 Query: 616 EVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRN 675 E+TES L N++ A L L++LG Q +IDDFGTGY+S + LK + D +KI F+R+ Sbjct: 927 EITESVFLENMEAAIEALTELKKLGVQFSIDDFGTGYSSLSYLKKLPIDRIKIAQEFVRD 986 Query: 676 IVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLID 735 I ++ D I+ + +A+ M ++AE VEN + +L G MQGY KP P + Sbjct: 987 IDTDDGDKAIIKATIAMAKSLGMKLIAEGVENHQQLAFLLLHGCHAMQGYYFAKPMPAQE 1046 Query: 736 TLNEIEP 742 + I Sbjct: 1047 VPSFIHS 1053 >UniRef50_A1WEV3 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WEV3_VEREI Length = 981 Score = 676 bits (1746), Expect = 0.0, Method: Composition-based stats. Identities = 112/489 (22%), Positives = 194/489 (39%), Gaps = 19/489 (3%) Query: 271 AVVLMISIHSYQNYIPIYPGYTTQLTITS--SSYLVFSFIVNYMAVLATRQRAVVRRIQR 328 + YP + + ++ ++ + I + + QR RIQR Sbjct: 497 QERWEGESWGRRKDGSGYPQWLSVSSVRDGDANGPITHSITLFRDISL--QREAQERIQR 554 Query: 329 LAYVDPVVHLPNVRALNRALRD--------APWSALCYLRIPGMEMLVKNYGIMLRIQYK 380 LA+ DP+ LPN L + AL +L + + + + G + Sbjct: 555 LAHFDPLTDLPNRVLLAERTQRQIAQEQARGGQLALLFLDLDHFKNVNDSLGHRIGDILL 614 Query: 381 QKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLKQF--RFFWDGMPMQ 438 ++ L L+ P + V +L G++ L L S + L F D + Sbjct: 615 VAVARRLQSLIGPQDTVSRLGGDEFLLLLPATSAAHAAKVASALLTAVAQPFQIDPYELS 674 Query: 439 PQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMN 498 + V + L + A + + N LQ + + N Sbjct: 675 TTLSVGIAMCPADGESFDTLYQRAD--AAMYSAKQSGRNRYGFFTADLQARTARALQIEN 732 Query: 499 RLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSS 556 L++ALE F L QP + V E LLR +++P F+PVA G + Sbjct: 733 ALRRALERQQFELHYQPQVSLGTGQVVGAEALLRWHHPELGVVAPAEFIPVAENSGQIVA 792 Query: 557 IDMWVIEHTLQFMAENRAKMPAHR-FAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIF 615 + WV+ + R ++NLS + P V++ L + + A +L Sbjct: 793 LGEWVLHTAARDAKRWLDMQLPLRAVSVNLSAVQFRHPQLPEMVTRCLQQAGLPARRLEL 852 Query: 616 EVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRN 675 E+TE A+ + A + L + G ++++DDFGTGY+S + LK LKID SF+R+ Sbjct: 853 ELTEGAAVDDPVAALAMMDQLHDRGVRLSMDDFGTGYSSLSCLKRFQIYKLKIDQSFVRD 912 Query: 676 IVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLID 735 + ++ D IV++I +A+ M AE VE + + + + G D QGYL +P P Sbjct: 913 LDDDANDRAIVSAIIRMAQALGMQTTAEGVETDGQLQFLRAQGCDEGQGYLFSRPLPADA 972 Query: 736 TLNEIEPIR 744 + ++ Sbjct: 973 FEAYLRAMK 981 >UniRef50_B5E7Y8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Geobacter RepID=B5E7Y8_GEOBB Length = 704 Score = 676 bits (1746), Expect = 0.0, Method: Composition-based stats. Identities = 103/477 (21%), Positives = 194/477 (40%), Gaps = 30/477 (6%) Query: 294 QLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRDA-- 351 +T+ + T ++ +I+ LAY D + LPN R + L A Sbjct: 232 LVTVLDEQGEAVCLTGTIQDI--TERKRAEEQIRLLAYYDALTGLPNRRFFLQQLEQALV 289 Query: 352 ------PWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQ------ 399 A+ +L + +++ G + + Q ++ L + G+ + + Sbjct: 290 FANRYDRMLAVLFLDLDRFKLVNDTLGHGVGDRLLQDVADRLLRCVRRGDCLARADEECP 349 Query: 400 ------LSGNDLALRLNTESHQERITALDSHLKQ---FRFFWDGMPMQPQIGVSYCYVRS 450 L G++ + L+ H + + + + + + +G + + Sbjct: 350 PSLVSRLGGDEFTIMLSDIEHFQDVAKIARRILEAVSVPYSLEGQEVFVSTSIGISLYPF 409 Query: 451 PVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFF 510 L+ + + N + + + +++ + ++L +AL+ F Sbjct: 410 DATTASDLIRNADGA--MYQAKEQGRNGYQIYDESMNAKALERIILESQLHKALKEEEFI 467 Query: 511 LMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQF 568 + QP + V E L+R + L+ P FLP+A E GL ID WV+ + Sbjct: 468 VYYQPQVSNQSGRVVGIEALVRWNSKELGLVEPGRFLPLAEEIGLVIQIDQWVMREACRQ 527 Query: 569 MAEN-RAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVK 627 A P AIN+S + V+ +L + ++ L E+TE + + + Sbjct: 528 HKLWLDAGFPPVTLAINISGQQFMKNELLETVTSVLKESGLDPGLLELELTEGVLMAHTE 587 Query: 628 QAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVA 687 + TLQ L+ +G ++AIDDFGTG++S + LK D+LKID +FI +I ++ D I Sbjct: 588 RTVKTLQALKGMGVRLAIDDFGTGFSSLSYLKRFPLDVLKIDRTFINDITTDPDDAAITL 647 Query: 688 SICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIR 744 + +A K+ V+AE VE + + + G D QGYL KP P + + Sbjct: 648 ATIEMAHTMKLKVIAEGVETKPQLDFLTKNGCDMYQGYLFSKPVPSTELPRLFNRWQ 704 >UniRef50_B3E9L8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter lovleyi SZ RepID=B3E9L8_GEOLS Length = 631 Score = 676 bits (1745), Expect = 0.0, Method: Composition-based stats. Identities = 113/491 (23%), Positives = 200/491 (40%), Gaps = 21/491 (4%) Query: 267 SLLWAVVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRI 326 + + + + + Y + + + + ++ Y + T +RA I Sbjct: 134 EQILTTQRRVEQNDFLHDGRHY--HLVGTPLKNHDGAISRVVLLYTDI--TERRAAAEEI 189 Query: 327 QRLAYVDPVVHLPNVRALNRAL--------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQ 378 +RLA+ D + LPN L L R A+ ++ + + + G Q Sbjct: 190 ERLAFFDSLTGLPNRVLLKDRLAQLLTRAGRYNEMVAILFIDLDRFKEVNDTLGHGTGDQ 249 Query: 379 YKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLKQ---FRFFWDGM 435 Q +S L+ L + V +L G++ + L + ++ + + + L Q D Sbjct: 250 LLQVVSERLTACLRSCDTVARLGGDEFVVLLPGITERDCVGDIAAKLLQSLCKPVQLDAR 309 Query: 436 PMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVA 495 + + + + L +T + N R + +++ Sbjct: 310 EVFTSGSIGISLWPIDGDSVSTLFKNADTA--MYHAKEQGRNTYRFYTPQMHATSMEQLT 367 Query: 496 MMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGL 553 + N L+ ALE L QP + E LLR +I PD F+P+A + GL Sbjct: 368 LSNDLRYALERGELHLCYQPQVSFETGGLIGVEALLRWIHPKLGMIPPDRFIPLAEDTGL 427 Query: 554 SSSIDMWVIEHTLQFMAEN-RAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQ 612 I WV+ + +P+ R A+N+S ++ F V +L + Sbjct: 428 IVPIGTWVLHEACRQAMMWVAQGLPSLRVAVNISAKQFRESDFSDTVKAVLQTTGLAPNL 487 Query: 613 LIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSF 672 L E+TE + NV Q ++TLQ L+++G +AIDDFGTGY+S + LK+ D LKID SF Sbjct: 488 LELELTEGMLIENVTQTKLTLQSLKDMGVTLAIDDFGTGYSSLSYLKHFPLDRLKIDKSF 547 Query: 673 IRNIVSNSLD-YQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQ 731 ++ I S D IV ++ L K+ V+AE VE ++ + + + D +QGY +P Sbjct: 548 VKEIAEKSGDAAAIVEAVVALGHSLKLTVIAEGVEQQDQVDFLHNRKCDELQGYFFSRPL 607 Query: 732 PLIDTLNEIEP 742 + Sbjct: 608 TPQALEELLRK 618 >UniRef50_A1TZQ7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Gammaproteobacteria RepID=A1TZQ7_MARAV Length = 819 Score = 676 bits (1745), Expect = 0.0, Method: Composition-based stats. Identities = 108/506 (21%), Positives = 208/506 (41%), Gaps = 23/506 (4%) Query: 255 MWGAMRYGYKLISLLWAVVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAV 314 +W ++R + + V ++S + Y I ++ +++ + Sbjct: 320 LWKSIR-----LQVQRVGVWQGEVNSTRKNGERYWEQLVVTPIKDNNGESTGYLILGEDI 374 Query: 315 LATRQRAVVRRIQRLAYVDPVVHLPNVRA--------LNRALRDAPWSALCYLRIPGMEM 366 ++ +++ R A D + LPN L +A RD + +L + + Sbjct: 375 SI--RKRYEQQLLRQANYDILTGLPNRMLALDRLKLALAQARRDESKVGVMFLDLDNFKH 432 Query: 367 LVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLK 426 + G + + +S L V +L G++ + L + + + + + Sbjct: 433 INDTLGHDAGDTLLIEAARRISSCLRGTSTVARLGGDEFLVVLPGLNGPDASSQVAERIL 492 Query: 427 ---QFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGA 483 F G + + ++ LL + A + + ++ R Sbjct: 493 KTFAPPFMLSGQEVFVTTSIGIATFPDDSDNSGTLLQHAD--AAMYEAKHKGKSAYARFT 550 Query: 484 MYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISP 541 + +++ M + +++ALE F L QPI V E LLR ++ P Sbjct: 551 PEMSEVSHERLQMESHMRKALELGEFELYFQPIVDTASGGLVAAEALLRWNNPAMGMVMP 610 Query: 542 DSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRA-KMPAHRFAINLSPTSVCQARFPVEVS 600 D F+P+A E GL I WV++ Q +A A+N+SP F + Sbjct: 611 DRFIPLAEETGLIIPIGEWVVKEACQAAYCWQAMTGREISIAVNVSPRQFRDPGFTDAIM 670 Query: 601 QLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKN 660 + L + L E+TE L N + L+ L ++G ++++DDFGTGY++ + LK+ Sbjct: 671 RALNDSNLRPELLELEITERLILDNSIETADILKQLDKVGIRLSVDDFGTGYSALSYLKS 730 Query: 661 VNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGID 720 D LKID SF+++++ + D +V +I ++A + VVAE VE E++ + + D Sbjct: 731 YPFDTLKIDKSFVQDVLKENEDASLVRAIINMAHSLGLKVVAEGVEEEDLTHFLKAEHCD 790 Query: 721 YMQGYLIGKPQPLIDTLNEIEPIRES 746 Y QGY +P P D ++ +E + Sbjct: 791 YSQGYFYSRPLPEQDFIHWLETNERA 816 >UniRef50_A0KRF8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=12 Tax=Shewanella RepID=A0KRF8_SHESA Length = 1077 Score = 675 bits (1744), Expect = 0.0, Method: Composition-based stats. Identities = 109/532 (20%), Positives = 217/532 (40%), Gaps = 27/532 (5%) Query: 232 MPLNEKSTIFSTNYTLSLLLP--LMMWGAMRYGYKLISLLWAVV-----LMISIHSYQNY 284 + L + T Y+L + + + R+ + + +W + I + + Sbjct: 531 IELINPAFSQITGYSLEEVKGRSPSILSSNRHPHHYYTAMWEALHKEGKWEGEIWNKRKD 590 Query: 285 IPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRAL 344 +YP Y + + + I +M + ++++ + + A D + LPN + Sbjct: 591 GQVYPEYLAITVVRNEQGEIIQHIGLFMDI--SKRKQYEQDLWYQANFDTLTGLPNRKLF 648 Query: 345 NRALRD--------APWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGED 396 N L+ + A+ + + + + G Q ++ L + + Sbjct: 649 NERLQHEIQLAQHDSRKLAILLIDLDQFKYINDVQGHATGDLLLQDVAKRLENIAGKNDF 708 Query: 397 VYQLSGNDLALRLNTESHQERITALDSHLKQF---RFFWDGMPMQPQIGVSYCYVRSPVN 453 V ++ G++ L L +++ I + S + + F + +Q Sbjct: 709 VARIGGDEFVLILPRVTNEFAIEHMASRIIETLATPFNLNEREIQISASFGIGVYPEDGL 768 Query: 454 HIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMA 513 + L T + +A N + + + + ++ + RL++A+ + F L Sbjct: 769 DVSSLTRN--TEMAMYQAKDAGRNNFKYFTSGMNQAMFARMELEQRLRRAVAQDEFTLFY 826 Query: 514 QPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAE 571 QPI M+ E L+R + + LI PD F+ +A E GL + WV+ + + + Sbjct: 827 QPIVDMKTGQICSVEALIRWQDPDLGLIPPDQFIAIAEETGLIEPMGEWVLNQAMHDLRQ 886 Query: 572 NRAKMPAHRFAINLSPTSV---CQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQ 628 + AIN+S F + + ++ I + E+TES + + Sbjct: 887 WQHMGLNLNVAINVSSRQCINTRGIGFDQVLQECFNRHHINPRNVHIEITESMLMGDASH 946 Query: 629 AQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVAS 688 TL+ ++ LG QI IDDFGTGY+S + LK ++KID SF+ + + N + +V + Sbjct: 947 CLSTLESIRHLGSQIYIDDFGTGYSSLSYLKKFPISVIKIDRSFVEHALENCSNANLVKA 1006 Query: 689 ICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEI 740 I + + +M +VAE +E E + + LG Y QGYL+ KP P + + Sbjct: 1007 IVMMGQSLEMELVAEGIETEAQWQFLRDLGCHYAQGYLLSKPLPFDEITPLL 1058 >UniRef50_C5V4D8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V4D8_9PROT Length = 1138 Score = 675 bits (1743), Expect = 0.0, Method: Composition-based stats. Identities = 116/485 (23%), Positives = 198/485 (40%), Gaps = 25/485 (5%) Query: 278 IHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVH 337 +H + +P ++ +V + T ++ I RLA+ DP+ Sbjct: 653 LHKRMDSGQSFPADVLLSSMKLDGRVVLQ--ATVRDI--TERKKSESEIVRLAFYDPLTG 708 Query: 338 LPNVRALNRALRDA--------PWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSP 389 LPN R L L+ A A+ ++ + + L G + +++ L Sbjct: 709 LPNRRLLMDRLQHALTSNLRNDKHGAILFIDLDNFKSLNDTKGHAVGDLLLVEVAQRLKG 768 Query: 390 LLEPGEDVYQLSGNDLALRLNTESHQERIT-----ALDSHLKQ---FRFFWDGMPMQPQI 441 + + V +L G++ + L+ SH + + Q + G Sbjct: 769 CVREEDTVARLGGDEFVVLLDNLSHGHDNAGAHTKRVAEKILQALNLSYMLQGYEYHSSP 828 Query: 442 GVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQ 501 + + + LL ++ + A N R Q L + + + L Sbjct: 829 SIGVALFCADASSPDELLKRADSA--MYQSKAAGRNTVRFYDERTQALLLARAELEHALH 886 Query: 502 QALEHNHFFLMAQPITGMR-GDVYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMW 560 ALE L Q V E+LLR +ISP F+P+A E G+ I W Sbjct: 887 HALEQQQLMLYYQVQVNADYQPVGAEVLLRWFHPVLGMISPAQFIPLAEESGMIIPIGYW 946 Query: 561 VIEHTLQFMAENRAKM--PAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVT 618 V+E + + + A+N+S +A F +V L+ I +L E+T Sbjct: 947 VLEQACDQLKRWASDVFKCDLVLAVNVSIRQFHEADFAQKVQALVTDSGISPDRLKLEIT 1006 Query: 619 ESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVS 678 ES + +V+ T+Q L+++G ++DDFGTGY+S + +K + D LKID SF+R+I Sbjct: 1007 ESMLVHDVENIIATMQQLKKIGLNFSMDDFGTGYSSLSSIKRLPLDQLKIDQSFVRDIGH 1066 Query: 679 NSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLN 738 + D IV +I +A+ K+ ++AE +E E+ R + G QGYL KP PL D Sbjct: 1067 DEHDKAIVRTIIAMAQSMKLNIIAEGIETEQQRRLLALKGCTNYQGYLFSKPVPLSDFEG 1126 Query: 739 EIEPI 743 + Sbjct: 1127 LLSRA 1131 Score = 69.3 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 9/105 (8%), Positives = 29/105 (27%), Gaps = 9/105 (8%) Query: 231 CMPLNEKSTIFSTNYTLSLLLPL--MMWGAMRYGYKLISLLWAVVLMISIHS-----YQN 283 + + + Y+ L+ M + + ++ + + + Sbjct: 467 TITDVNERFCQISQYSREELIGKNHKMLNSGWHPKGFFKAMYRAITRGQVWNDEVCNRAK 526 Query: 284 YIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQR 328 +Y T + + +I + T ++ I+R Sbjct: 527 DGSLYWLDMTVVPFMDECGKPYKYIGIRTDI--TERKKSAEAIER 569 >UniRef50_C5V122 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V122_9PROT Length = 995 Score = 675 bits (1742), Expect = 0.0, Method: Composition-based stats. Identities = 102/542 (18%), Positives = 204/542 (37%), Gaps = 40/542 (7%) Query: 232 MPLNEKSTIFSTNYTLSLLLP--LMMWGAMRYGYKLISLLWA-----VVLMISIHSYQNY 284 + ++ +T Y +L + +W + Sbjct: 460 IIRVNQAFQDTTGYCAEEVLGKNPRFLSSGCQDSAFYVEMWQQLVANGTWSGELWDRHKD 519 Query: 285 IPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRAL 344 IYP T + + ++ + + + ++ I+ LA+ D + + Sbjct: 520 GHIYPKNLTITAVKNILGETTEYVSIFSDI--SERKRAEEEIRNLAFYDVLT-----QLP 572 Query: 345 NR-------------ALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLL 391 NR + R + A+ +L + + L G +++ + + Sbjct: 573 NRRLLLDRLHLALSVSARSGSYGAVLFLDMDRFKRLNDTLGHGCGDLLLIEVAERIRFCV 632 Query: 392 EPGEDVYQLSGNDLALRLNTESHQER-----ITALDSHLK---QFRFFWDGMPMQPQIGV 443 + V + G++ + L + ++ + + Sbjct: 633 REVDTVARFGGDEFVILLEEVGKNADEASKKAALIAEKIRAALSVPYKIKEHEYHSSPSI 692 Query: 444 SYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQA 503 N + LL + + + N R +Q + ++ ++ L +A Sbjct: 693 GVNLYCGNGNAVEDLLKHADMA--MYEAKESGRNAVRFFDPVMQHSVSERASLEADLHRA 750 Query: 504 LEHNHFFLMAQPITGM-RGDVYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVI 562 + L Q + + E LLR ++SP F+P+A E L + WV+ Sbjct: 751 VPDQQLQLYYQIQVDSNQRSLGAEALLRWIHPTRGMVSPAQFIPLAEESILILELGDWVL 810 Query: 563 EHTLQFMAENRAK--MPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTES 620 + + +A M A+N+S Q F +V+++L +Q++A +L E+TES Sbjct: 811 DAACRQLAIWSEADLMRHLTLAVNVSGKQFKQRDFVEKVARILQVHQVDASRLKLELTES 870 Query: 621 NALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNS 680 L +V +Q L+ L ++++DDFGTGY+S + LK + D +KID SF+R++ + Sbjct: 871 VVLNDVTDVISKMQALKALRVRLSMDDFGTGYSSLSYLKQLPLDQIKIDQSFVRDMTFDQ 930 Query: 681 LDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEI 740 D +V +I +A+ + V+AE VE E + + LG QGYL KP P+ + Sbjct: 931 NDAVMVQTIIDMAKNFGLNVIAEGVETEAQKLLLEQLGCLNYQGYLFSKPLPIAQFEALL 990 Query: 741 EP 742 + Sbjct: 991 KE 992 >UniRef50_D0IUW1 Diguanylate cyclase/phosphodiesterase with n=3 Tax=Comamonadaceae RepID=D0IUW1_COMTE Length = 900 Score = 674 bits (1741), Expect = 0.0, Method: Composition-based stats. Identities = 126/537 (23%), Positives = 225/537 (41%), Gaps = 26/537 (4%) Query: 232 MPLNEKSTIFSTNYTLSLLLP--LMMWGAMRYGYKLISLLWAVV-----LMISIHSYQNY 284 + + ++ + +L M+ + R+ +WA + I + + Sbjct: 358 ILSVNHAFTKLLGFSEAEMLGKTPRMFKSGRHDKAFYDAMWASMHATGHWQGEIWNRRKN 417 Query: 285 IPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRAL 344 ++P + + ++ V ++ + + + ++A ++++ LA+ D + LPN Sbjct: 418 GEVFPERMSLSAVKDANDKVTHYVCMFTDI--SAEKAREQQLEFLAHRDTLTGLPNRSQF 475 Query: 345 NRALRDA--------PWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGED 396 R L +A A+ I + + +YG + + + +S + L G+ Sbjct: 476 TRMLGEAVELSQSTNRRMAVLLFNIDRFKDVNDSYGHSIGDEVLRHVSVQMQGALRHGDI 535 Query: 397 VYQLSGNDLALRLNTESHQERITALDSHLKQFR----FFWDGMPMQPQIGVSYCYVRSPV 452 + +L+G+++ + + ++ + L DG+ + + C Sbjct: 536 IGRLAGDEICVVAQSICGRDSAVDVAERLMAAAGQPWTTPDGLSVVVSVSAGICLYPDHA 595 Query: 453 NHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLM 512 LL A + N + + ++++A+ RL++ALE H L Sbjct: 596 LTADDLLQGA--HAAVYGAKARGSNAWCFFHENMTQAARERLALEARLRRALELGHMRLY 653 Query: 513 AQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMA 570 QP + V E LLR + LISP F+PVA G+ + +WV+ + Sbjct: 654 YQPQIELATGRLVGAEALLRWLDPEEGLISPARFIPVAENSGVIGPLGLWVLGEACRQGQ 713 Query: 571 ENRA-KMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQA 629 + RA +P A+N+S ++ L K A L E+TES ++A Sbjct: 714 QWRAAGLPDLAIAVNVSLHQFLLTDIAGATAEALNKSGFPASLLELEITESALAEKPEEA 773 Query: 630 QITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASI 689 L L+ELG ++AIDDFGTGY+S A LK DLLKID FIR+I ++ D I +S+ Sbjct: 774 LAVLNRLRELGLRLAIDDFGTGYSSLAHLKRFPLDLLKIDQGFIRDIPHSADDMTISSSV 833 Query: 690 CHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIRES 746 L + V+AE VE +E + G DY QGY +P P D +E RE Sbjct: 834 IALGHAMGLKVLAEGVETQEQLSFLQQKGCDYFQGYFCSRPLPAEDFTRLLEKTREG 890 >UniRef50_Q74A79 Sensory box/GGDEF family protein n=1 Tax=Geobacter sulfurreducens RepID=Q74A79_GEOSL Length = 873 Score = 674 bits (1739), Expect = 0.0, Method: Composition-based stats. Identities = 119/622 (19%), Positives = 229/622 (36%), Gaps = 35/622 (5%) Query: 145 FVGLLASRENLVGVMPFNLGTLINYQALLVGNLIGV-PLCYFIIRVVRNPFYLRSYYSQL 203 + A+ ++ G L G L +F + V F + ++ +L Sbjct: 247 MIAGYAAIPDIYGKPALLLRVDAPRSIYQEGKKAVTYFLTWFAVVGVCFAFIINLFWRRL 306 Query: 204 KQQVDAKVTKKEFALWLLALGALLLLLCMPLN------EKSTIFSTNYTLSLLLPLMMWG 257 + + +E ++ +LL P +T ++ + L + Sbjct: 307 LESLQQGRRSEERNRLVVERTNQAILLLEPGAGTIIDANPATCVLLGFSRNELTGADI-H 365 Query: 258 AMRYGYKLISLLWAVVLMISIHSY-----QNYIPIYPGYTTQLTITSSSYLVFSFIVNYM 312 A+ G + + + + + + + + Sbjct: 366 ALLSGPV--QEVDSELERCLRETRELSLCHRDGAELVVEAMATQV--PHGDDQALCLMFH 421 Query: 313 AVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL--------RDAPWSALCYLRIPGM 364 + T +R + A D + LPN L L R AL + Sbjct: 422 DI--TDRRRFQEELLHQATHDTLTGLPNRSLLEDRLNQAVAGARRRGQMVALLMFDLDNF 479 Query: 365 EMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDS- 423 +++ G Q + ++ + + + +L G++ + L + + + Sbjct: 480 KVVNDTLGHTAGDQLLRSVAARIRSFVRNCDTFARLGGDEFVIVLTNLTRMDDAVTVAES 539 Query: 424 --HLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRR 481 +L FF G + + + + L+ + +T + + + N + Sbjct: 540 FRNLLAMPFFLGGREIFITASMGISLFPDDGDTMEALIKKADTA--MYHIKESGRNSFQF 597 Query: 482 GAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELI 539 A + +++ ++ + L++ALE L QP V E L+R + LI Sbjct: 598 FAEEMNQKVNARLTIETGLRRALEKGEMLLHYQPRLEPGTGAVVGMEALVRWNSPDMGLI 657 Query: 540 SPDSFLPVAHEFGLSSSIDMWVIEHTLQF-MAENRAKMPAHRFAINLSPTSVCQARFPVE 598 SP F+P+A + GL I WV+ + +R + R ++N+S F Sbjct: 658 SPADFIPIAEDSGLIVEIGDWVLATACCQALEWHRMGHDSLRVSVNISARQFVGHDFVDR 717 Query: 599 VSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARL 658 V +++ + + + E+TE+ NV + + L+E G I+IDDFGTGY+S L Sbjct: 718 VVRIIEQSGLSPHFVELELTETALTHNVDETVKIMNRLRERGITISIDDFGTGYSSLNYL 777 Query: 659 KNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLG 718 K D+LKID SFI ++V D IVA+I +A M VVAE VE E + ++ Sbjct: 778 KRFPVDVLKIDKSFIDDMVKRREDAAIVATIIGIAHHMHMKVVAEGVETAEQMKLLMEGN 837 Query: 719 IDYMQGYLIGKPQPLIDTLNEI 740 + +QG+ +P P + I Sbjct: 838 CEEIQGFYFSRPLPPEEFERYI 859 >UniRef50_Q60BD0 Sensory box protein n=1 Tax=Methylococcus capsulatus RepID=Q60BD0_METCA Length = 1214 Score = 673 bits (1737), Expect = 0.0, Method: Composition-based stats. Identities = 112/517 (21%), Positives = 214/517 (41%), Gaps = 27/517 (5%) Query: 254 MMWGAMRYGYKLISLLWAVV-----LMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFI 308 ++ + +G + +W + I + + +YP T + S++ + ++ Sbjct: 702 RLFKSGLHGAEFYREVWRSLEQTGRWQGEIWNRRKNGEVYPERKTITAVRSANGDITHYV 761 Query: 309 VNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL--------RDAPWSALCYLR 360 + + + +I++LAY D + LPN + L R+ + AL ++ Sbjct: 762 AISSDI--SELKRTEEKIRQLAYYDSLTGLPNRSLIFERLTQQMKAARREGTYGALLFMD 819 Query: 361 IPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITA 420 + + L + G + + +++ L LE E +L G++ + L + A Sbjct: 820 LDYFKTLNDSLGHHMGDRLLVQVAERLKNCLEDEEAAARLGGDEFVVLLAPAKPSASVAA 879 Query: 421 LD--------SHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVT 472 L F D + + N +L + +T + + Sbjct: 880 GQAIVHARRVRELLSAPFQLDDYVHYISVSIGIALFPDGANTAEDVLKQADTA--MYVAK 937 Query: 473 NAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDV-YHEILLRM 531 N + R ++ ++ ++ + L++AL ++ F + QP G V E L+R Sbjct: 938 NEGRDGVRFYESAMEAVVRGRLELEKALRKALANDEFEVYYQPQMLGDGRVVGAEALIRW 997 Query: 532 KGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRA-KMPAHRFAINLSPTSV 590 ISPD F+PV + G+ + V+ +AE RA + + ++N+SP Sbjct: 998 FHPERGAISPDQFIPVCEQNGMILRVGAIVLRRACACLAEIRARGLALPKLSVNVSPRQF 1057 Query: 591 CQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGT 650 ++ ++ Q + + L E+TE L + + A + L+ LG +IDDFGT Sbjct: 1058 MRSDLMTQLEQFCLENGVSPTDLCLELTEGVLLNHTELAVAQIGRLKNLGVSFSIDDFGT 1117 Query: 651 GYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEI 710 GY+S A LK++ D LKI +F+R++ +S D IV +I +AR + V+AE VE Sbjct: 1118 GYSSLAYLKHLPLDDLKIASAFVRDLEQDSSDAAIVETIVSMARHLGLDVIAEGVETRTQ 1177 Query: 711 REAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIRESA 747 E + G QG +P P D + + + A Sbjct: 1178 VEILERYGCHRFQGNYFARPLPKDDFIRFVAERQRRA 1214 >UniRef50_C1DB08 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DB08_LARHH Length = 1092 Score = 672 bits (1736), Expect = 0.0, Method: Composition-based stats. Identities = 135/556 (24%), Positives = 224/556 (40%), Gaps = 21/556 (3%) Query: 200 YSQLKQQV--DAKVTKKEFALWLLALGALLLLLCMPLNEKSTIFSTNYTLSLLLPLMMWG 257 + ++++ A+V + + + +L P E T ++ L L Sbjct: 529 LRRAERELMLSAQVFEHGSEAVFITDASHRILRVNPAFEAITGYAAGEVLGLTPDFRCVS 588 Query: 258 A---MRYGYKLISLLWAVVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAV 314 + + I + Y ++ + ++ V FI + + Sbjct: 589 SPGGTSISQRWELAEQTGRWQGEIVCRRRSGEHYYEWSALSVVRHANGSVLYFIGQFSDI 648 Query: 315 LATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL-----RDAPWSALCYLRIPGMEMLVK 369 + +A R RLA DP+ LPN L L R+ A+ + + + + Sbjct: 649 --SAVKAAEARALRLACFDPLTGLPNRSLLFDRLQEVLNREPHNGAVLFCDLDRFKNIND 706 Query: 370 NYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLK--- 426 + G L ++++ L + PG+ V + G++ L L S + L L Sbjct: 707 SLGHTLGDAVLKEVARRLVARVRPGDTVCRYGGDEFVLVLPGLSDCVVLEQLAEQLLADV 766 Query: 427 QFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYL 486 DG+ ++ + N LL + A L + N R + Sbjct: 767 SSPILLDGLDLRVTPSLGVAVFPRDGNDCDALLRHAD--AALYHAKSRGRNTYRFFTREI 824 Query: 487 QRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSF 544 + + + + + L+ ALE F L QP M V E LLR K +ISP F Sbjct: 825 DDRVSEYLHIEHGLRSALERGEFELHYQPQVDMAFGRVVGVEALLRWKHPEQGMISPVRF 884 Query: 545 LPVAHEFGLSSSIDMWVIEHTLQFMAENR-AKMPAHRFAINLSPTSVCQARFPVEVSQLL 603 +P+A E GL I MWVI + R A + A+NLS ++ + + L Sbjct: 885 VPIAEETGLIVPIGMWVIREACRQAMLWRRAGLRPMTMAVNLSGRQFSRS-VIEAIDEAL 943 Query: 604 AKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNA 663 A ++ L EVTES + + ++A L+ L+ G +A+DDFGTGY+S A LK Sbjct: 944 ADSGLDPRWLQVEVTESVIMEDTQEAYTVLEALRARGLTVAVDDFGTGYSSLAYLKRFPI 1003 Query: 664 DLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQ 723 D LKID SFIR+I + + IV +I +A ++ V+AE VE + + G D +Q Sbjct: 1004 DKLKIDRSFIRDIDLDEDNPVIVDAIIGMAHNLRIKVLAEGVETRAQWDYLRQQGCDEVQ 1063 Query: 724 GYLIGKPQPLIDTLNE 739 GYL+ +PQP Sbjct: 1064 GYLVSRPQPAAALGQW 1079 >UniRef50_Q31NI4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Synechococcus elongatus RepID=Q31NI4_SYNE7 Length = 929 Score = 672 bits (1735), Expect = 0.0, Method: Composition-based stats. Identities = 118/537 (21%), Positives = 216/537 (40%), Gaps = 27/537 (5%) Query: 232 MPLNEKSTIFSTNYTLSLLLPL--MMWGAMRYGYKLISLLWAVVLMIS-----IHSYQNY 284 + + T Y+ + +L + I + + I +++ Sbjct: 395 VIYVNPAFERITGYSEAEMLGRNCRILQGNERDSLQIEEIHRGLSQAENVHVVIRNFRKD 454 Query: 285 IPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRAL 344 + I ++ V FI + T Q+ + A D + LPN L Sbjct: 455 GQPFWNDLYISPIFNAQGNVTHFIGVQNDI--TEQKRYEEELSFSASHDVLTGLPNRAVL 512 Query: 345 NRALRDA--------PWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGED 396 LR A+ ++ + G +++ + G +++ + + G+ Sbjct: 513 EDRLRQGCKMALRQKHSLAILFIDLDGFKLINDSIGHRSGDLLLVEVAQRMCEQVRAGDT 572 Query: 397 VYQLSGNDLALRLNTESHQERITALDSHLKQ---FRFFWDGMPMQPQIGVSYCYVRSPVN 453 V ++ G++ + L + + ++ L + G+ + + + Sbjct: 573 VARIGGDEFIILLVDLKLENDVISIADRLLASVARPYHIQGIYLHVTASMGITLSDGDIE 632 Query: 454 HIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMA 513 L+ + + + N + L L+++V + N LQ+A+E F L Sbjct: 633 QPTQLIQQADLA--MYKAKQEGRNNYQWYTNDLNLRLRERVHLRNELQKAIETEAFELYF 690 Query: 514 QPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAE 571 QP + E LLR + ISP +F+P+A + G + WV+E + + + Sbjct: 691 QPKIEGCSGQVIGLEALLRWQHPQMGFISPATFVPIAEDTGQIIPLSQWVLETACRQLRD 750 Query: 572 N-RAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQ 630 + + A A+N+S + F V L KYQ+++ L E+TE+ N ++A Sbjct: 751 LLQQGIAAPSVAVNISTVQFRRINFVKSVQSALQKYQLKSEHLEIEITENVLFDNTEKAI 810 Query: 631 ITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASIC 690 LQ L+ELG I+IDDFGTG++S + LK + D +KID SF++ I ++S D I I Sbjct: 811 EKLQRLKELGVNISIDDFGTGFSSLSYLKELPIDTVKIDRSFVQEINTDSRDAAITQGII 870 Query: 691 HLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEI--EPIRE 745 +A ++ VVAE VE E+ + + D QGY KP P + E RE Sbjct: 871 SMAHHLRLNVVAEGVETEQQFKFLQQSNCDQYQGYYFAKPMPFEALKQYLMDEAARE 927 >UniRef50_C6XAG8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XAG8_METSD Length = 950 Score = 672 bits (1735), Expect = 0.0, Method: Composition-based stats. Identities = 110/509 (21%), Positives = 199/509 (39%), Gaps = 39/509 (7%) Query: 264 KLISLLWAV-VLMISIHSYQNYIPIYPGYTTQL--------------TITSSSYLVFSFI 308 W ++ Q + L + + Sbjct: 438 AFYPEEWRSRIVQALEECLQK-GDSFDEELPILTCKDKLLWIRIIGQAVYDLHGNITRIE 496 Query: 309 VNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRD--------APWSALCYLR 360 + + Q+ RIQ LA+ D + LPN + L + A+ ++ Sbjct: 497 GAIQDI--SAQKVAESRIQHLAFYDSLTSLPNRQLFIDRLEHTLAYSARTSKSGAVLFID 554 Query: 361 IPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITA 420 + + L G L Q+++ ++ L + V + G++ + L+ S + A Sbjct: 555 LDNFKTLNDTMGHDLGDMLLQQVAMRIAGCLRESDTVARFGGDEFVVLLHELSGNHQEAA 614 Query: 421 LDSHLKQ--------FRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVT 472 + L F + G + + +L + + Sbjct: 615 AQARLVSEKILISFAHPFQFSGYEHHTSASIGVTLFDQQPTTVDEILKRADLA--MYQSK 672 Query: 473 NAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDV-YHEILLRM 531 A N+ R +Q + D+V M L+ L ++ FFL QP +G + E LLR Sbjct: 673 AAGRNVIRFFDPEMQALIADRVEMEEDLRNGLRNDEFFLCYQPQVDNQGRLLGAEALLRW 732 Query: 532 KGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAK--MPAHRFAINLSPTS 589 + +I P +F+P+A + GL S+ WV+ + + + + A+N+S Sbjct: 733 RNPKRGMIPPSTFIPLAEDSGLIVSVGNWVMYAACKQLVLWAQQPLTSSLTLAVNVSAKQ 792 Query: 590 VCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFG 649 + Q F ++ ++L +L E+TES + N++ + L+ +G +IDDFG Sbjct: 793 LRQMDFVDQIVEVLNVTGANPKRLKLELTESLMVNNIEDVIAKMTELKNIGVGFSIDDFG 852 Query: 650 TGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEE 709 GY+S + LK + D LKID SF+R+++++ D I +I L + + V+AE VE Sbjct: 853 IGYSSLSYLKLLPLDQLKIDQSFVRDVLTDPNDAVIARTIIALGKSLNLQVIAEGVETLS 912 Query: 710 IREAVLSLGIDYMQGYLIGKPQPLIDTLN 738 RE + + G D QGYL KP P + Sbjct: 913 QREFLDNYGCDAYQGYLFSKPVPADEFER 941 >UniRef50_P72843 Regulatory components of sensory transduction system n=1 Tax=Synechocystis sp. PCC 6803 RepID=P72843_SYNY3 Length = 840 Score = 672 bits (1734), Expect = 0.0, Method: Composition-based stats. Identities = 110/530 (20%), Positives = 213/530 (40%), Gaps = 26/530 (4%) Query: 232 MPLNEKSTIFSTNYTLSLLLP--LMMWGAMRYGYKLISLLWAVV-----LMISIHSYQNY 284 + + Y + +L + + + L+W + H+ + Sbjct: 307 ITYVNPKFEEISGYKSAEVLGRNPRILKSGNKTQEDYELMWKTLASGRNWHGEFHNRRKN 366 Query: 285 IPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNV--- 341 +Y + I++ +V ++ + T+++ + A+ D + LPN Sbjct: 367 GELYWERASISPISNQQGIVTHYVAVKEDI--TKEKQQAEALFHQAHYDHLTGLPNRILA 424 Query: 342 -----RALNRALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGED 396 +A+ ALR L +L + + + G Q ++S L L + Sbjct: 425 KDRLQQAIESALRQKHIFGLMFLDLDNFKKVNDTLGHDAGDQLLVEVSERLQRALRQTDT 484 Query: 397 VYQLSGNDLALRLNTESHQERITALDSHLKQF---RFFWDGMPMQPQIGVSYCYVRSPVN 453 V +L G++ + L+ SH ++ A+ L + G+ + Sbjct: 485 VARLGGDEFLIILDQVSHSRKLMAIAQRLLRVMRQPVNLQGLEFFVHGSIGITVFPDDGF 544 Query: 454 HIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMA 513 H +LL +T + A NM R ++ + + ++A+ + L+Q L F ++ Sbjct: 545 HADVLLRNADTA--MYAAKLAGRNMFRFFTPHMNQAAQQRMAIESELRQGLSRQEFQILY 602 Query: 514 QPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAE 571 QPI + V E L+R + PD F+P+A E GL + W++++ A Sbjct: 603 QPIVSLESGQIVGAEALMRWHNRLLGTVPPDQFIPIAEEVGLIVELGEWLLDNVCCQAAH 662 Query: 572 NRAKMPAHR--FAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQA 629 + + ++N+SP + + F + L +YQ+ L E+TE+ L Sbjct: 663 WHSALGEQTFWVSVNVSPRQLKDSYFVAILQGFLQRYQVRPEWLELEITENLILEENGDL 722 Query: 630 QITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASI 689 L L+E +++DDFGTGY+S L+ N + LKID SF+ + ++ +V +I Sbjct: 723 LKNLSDLEEENIALSLDDFGTGYSSLNYLRKFNFNSLKIDRSFVELLPHDNNTVGLVRAI 782 Query: 690 CHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNE 739 +A ++ V+AE +E E + G DY QGYL + + + Sbjct: 783 IAMAHHLELKVIAEGIETPEQWNFLRLQGCDYGQGYLFSPAIAVEEWESL 832 >UniRef50_Q602I2 Sensory box protein/response regulator n=1 Tax=Methylococcus capsulatus RepID=Q602I2_METCA Length = 710 Score = 672 bits (1734), Expect = 0.0, Method: Composition-based stats. Identities = 121/588 (20%), Positives = 218/588 (37%), Gaps = 38/588 (6%) Query: 190 VRNPFYLRSYYSQLKQQVDAKVTKKEFALWLLALGALLLLLCMPLNEKSTIFSTNYTLSL 249 +RN L +L++++ +E + + + +N + I + N Sbjct: 122 LRNHARLVMQERRLQREIAEHKAAREQLQVAGMVFSASSEGMLLVNADNRIVAVNPAFVA 181 Query: 250 LLP----------LMMWGAMRYGYKLISLLWA-----VVLMISIHSYQNYIPIYPGYTTQ 294 L + + R+G +WA I + + Y + T Sbjct: 182 LTGYGPEDVVGKDPKLLQSGRHGPAFYQAMWAALEATGTWRGEIWNRRRNGEEYAEHLTI 241 Query: 295 LTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL------ 348 TI + V + + + T ++A I+ + D + LPN R L L Sbjct: 242 NTIYDEAGKVHLRVALFSDI--TEKKASEALIEFQSCYDALTRLPNRRLLAERLALASER 299 Query: 349 --RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDV--YQLSGND 404 RD AL Y+ + + + G +++H + + E V +L G++ Sbjct: 300 AHRDRGRVALLYIDLDHFKEVNDTLGHHQGDALLVQVAHRVRRCVRESETVTVARLGGDE 359 Query: 405 LALRLNTESHQERITALDSHL---KQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGE 461 + + + + L + F + LL Sbjct: 360 FTVIVPDFEGMDEVERLARAIIDSLSEPFRLGDQLAHVSASIGITVFPDDAADTDGLLRN 419 Query: 462 LNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRG 521 + + A N + +QR + +V + L+ A++ L QPI + Sbjct: 420 ADQA--MYAAKRAGRNGYQAFNPEMQRAMSMRVRLSQALRDAVQAGQLRLHYQPIVELAS 477 Query: 522 DV--YHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKM-PA 578 E LLR + +SP +F+P+A + G I WV E A R++ Sbjct: 478 GRVRKAEALLRWEHPEFGEVSPAAFIPIAEDCGSIHCIGDWVFERAACQAARWRSRFGTD 537 Query: 579 HRFAINLSPTSVCQA--RFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHL 636 + +IN+SP F + + L + ++ L E+TE+ + + L Sbjct: 538 FQVSINVSPRQFQAGGRDFGRWLER-LGELGLDGSMLALEITETLLMDTDQAIADKLAQF 596 Query: 637 QELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMK 696 + G QIA+DDFGTGY+S A LK D LKID +F+R++ +S + + +I +A Sbjct: 597 RAAGVQIALDDFGTGYSSLAYLKEFRIDYLKIDRTFVRDMTPDSKSFLLSEAIVTMAHRL 656 Query: 697 KMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIR 744 + V+AE VE + + +G DY QGYL +P P + Sbjct: 657 GLKVIAEGVETPQQYALLERIGCDYFQGYLFSRPLPEDAFEGLLRSAS 704 >UniRef50_A1K569 EAL/GGDEF/PAS/PAC-domain containing signalling protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K569_AZOSB Length = 947 Score = 672 bits (1734), Expect = 0.0, Method: Composition-based stats. Identities = 111/491 (22%), Positives = 202/491 (41%), Gaps = 18/491 (3%) Query: 271 AVVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLA 330 + + P P + + +S+ ++ + + ++ +A Sbjct: 453 QGAWSGEVTVRREDGPTLPAQLSVSAVLNSAGGATHYVGALTD--MSAHKQTEALLRHMA 510 Query: 331 YVDPVVHLPNVRALNRALRDAPWSA--------LCYLRIPGMEMLVKNYGIMLRIQYKQK 382 D + LPN L+ R A A L ++ + + + + G + ++ Sbjct: 511 EYDALTDLPNRSLLHDRARAAIQGAARTDRLAALLFIDLDRFKNVNDSLGHSVGDALLRQ 570 Query: 383 LSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERIT-ALDSHLKQF--RFFWDGMPMQP 439 + L+ LL G+ + + G++ + L + + + F F + + Sbjct: 571 AAKRLASLLHGGDTIARPGGDEFVMLLAEITDRAVAANRAAQIIDAFSTPFRVEHYELSV 630 Query: 440 QIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNR 499 + LL + A + + N R + +++++ + N Sbjct: 631 TPSIGIAIAPDDGVDADTLLRNAD--AAMYHAKESGRNTYRFFTDEMSLRVRERLELENL 688 Query: 500 LQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSI 557 L+QA+ + F + QP G+ + E L+R + LI+P+ F+P+A + GL +I Sbjct: 689 LRQAMSRDEFEVFYQPQFGLSDHRILGCEALVRWRHPERGLIAPERFIPLAEDTGLIVAI 748 Query: 558 DMWVIEHTLQFMAENRA-KMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFE 616 V+E RA + A+N SP + F V+++LA+ + A L E Sbjct: 749 GRRVLETACHTAQGWRAAGLGDIPVAVNASPVQIHHGNFAETVAEVLAETGLPARLLEIE 808 Query: 617 VTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNI 676 +TES + + TL LQ++G ++AIDDFGTGY+S A LK D LKID SFI ++ Sbjct: 809 LTESTLMADAAPVAATLAALQDMGVRLAIDDFGTGYSSLAYLKRFQLDKLKIDRSFINDL 868 Query: 677 VSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDT 736 + D I +I +AR M V+AE VE ++ G QGYL P P+ Sbjct: 869 PGDPDDANITVAIIGIARSLGMSVIAEGVETAAQERFLVDQGCAEGQGYLFSPPVPVESM 928 Query: 737 LNEIEPIRESA 747 + R++A Sbjct: 929 TALLATARDAA 939 >UniRef50_C6XBJ6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XBJ6_METSD Length = 1150 Score = 672 bits (1734), Expect = 0.0, Method: Composition-based stats. Identities = 114/533 (21%), Positives = 203/533 (38%), Gaps = 26/533 (4%) Query: 232 MPLNEKSTIFSTNYTLSLLLP--LMMWGAMRYGYKLISLLWAVV-----LMISIHSYQNY 284 + + T Y+L ++ + + R G + LW + I + + Sbjct: 619 IITINPAFSEMTGYSLEEVIGKNPKILSSGRQGKEFYQELWNTLETSGEWRGEIWNRRKS 678 Query: 285 IPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRAL 344 Y + I S +F + + + T ++ I A D + LPN R Sbjct: 679 GEEYAEWLAINNIYSEDGKLFRRVALFSDI--TEKKRADALIWNQANYDLLTQLPNRRLF 736 Query: 345 NRALRD--------APWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGED 396 + L+ AL ++ + + + G + SH + L+ + Sbjct: 737 SDRLQQEIKKSQHDHSQFALLFIDLDRFKEVNDTLGHSHGDYLLIEASHRIQRHLKETDT 796 Query: 397 VYQLSGNDLALRLNTESHQERITALDSHLKQF---RFFWDGMPMQPQIGVSYCYVRSPVN 453 V +L G++ + + +T + + + +G + + Sbjct: 797 VGRLGGDEFTVIIANLPDPSVMTLIAQRVLDALAAPYDLEGEIVYLSASIGITVFPEDAT 856 Query: 454 HIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMA 513 LL + + N +Q + ++ MM L+ AL N F + Sbjct: 857 TSAELLKNADQA--MYEAKKNGRNRFSFFTPMMQAMAQARMRMMRDLRNALGLNQFTVYF 914 Query: 514 QPITGMRGDVY--HEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAE 571 QPI + E L+R + ISP F+P+A E GL I WV + + Q + + Sbjct: 915 QPIVDLSSQRIHKAEALIRWQHPELGFISPAEFIPLAEETGLIHEIGDWVFQQSAQLVKQ 974 Query: 572 N-RAKMPAHRFAINLSPTSVCQARFPVE-VSQLLAKYQIEAWQLIFEVTESNALTNVKQA 629 + ++N SP + + L+ + ++ E+TE L Sbjct: 975 CIPIVGDDFQVSVNKSPVQFRDRTQAHQDWMEYLSGLGLSGHNIVVEITEGLLLNADSGI 1034 Query: 630 QITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASI 689 L H ++ G Q+AIDDFGTGY+S + LK + D LKID SF+RN+ D + +I Sbjct: 1035 SDKLLHFRDAGMQVAIDDFGTGYSSLSYLKKFDIDYLKIDQSFVRNLSGEGEDLALCEAI 1094 Query: 690 CHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEP 742 +A + V+AE VE R+ + +G DY QGYL +P P + + +E Sbjct: 1095 ATMAHKLDLRVIAEGVETTAQRDLLAQIGCDYGQGYLFSRPVPAEEFMQLLER 1147 >UniRef50_A1ASK8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=A1ASK8_PELPD Length = 858 Score = 672 bits (1734), Expect = 0.0, Method: Composition-based stats. Identities = 94/475 (19%), Positives = 185/475 (38%), Gaps = 19/475 (4%) Query: 282 QNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNV 341 + + + + + ++ +++ LA D + L N Sbjct: 229 RRDGSRITV-LSCHAVVRRPGEAPELYGL--DIDISERKINEEQLEYLATHDELTGLANR 285 Query: 342 RALNRAL--------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEP 393 + L R A+ L + +++ + G + ++ L ++ Sbjct: 286 ALFHDRLEQSLHYAKRSGRIVAVLLLDLDRFKIINDSLGHSFGDRLLSAVAQRLDRVVRD 345 Query: 394 GEDVYQLSGNDLALRLNTESHQERITALDSHLK---QFRFFWDGMPMQPQIGVSYCYVRS 450 + V +L G++ L L + + + L S + +G + + Sbjct: 346 TDTVARLGGDEFVLLLAEVTEPDDVGLLASRILHELAVPHRIEGREIVMSASLGISLYPK 405 Query: 451 PVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFF 510 L+ + + + A + + + + + + L+ ALE F Sbjct: 406 DSGDGSTLIRNADIA--MYRAKQEGGGVFSFYAPEMNQRAMETMEIESALRLALERGEFT 463 Query: 511 LMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQF 568 L QP + E L+R +++P F+P+A E GL I WV++ + Sbjct: 464 LYYQPKVDLASGRISGCEALIRWLHPRRGVVAPADFIPLAEETGLIVPIGTWVLKEACRQ 523 Query: 569 MAENRAKMPAH-RFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVK 627 + +A+ A+NLS P V ++L + ++ L E+TES + + Sbjct: 524 VRAWQAEGVPIANVAVNLSARQFRTGDLPGLVREVLGETGLDPHLLELEMTESMVMADHA 583 Query: 628 QAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVA 687 Q ++ L +G ++++DDFGTGY+S+A L + + LKID SFI+ IV++ I Sbjct: 584 QVVAVMEELTAIGVRLSLDDFGTGYSSFAHLSHFPINHLKIDRSFIKQIVTDPNSATIAT 643 Query: 688 SICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEP 742 SI +A ++ +AE VE E + G D +QGYL+ +P P + + Sbjct: 644 SIIAMAHRMRLKAIAEGVETEAQLAYLRKQGCDEIQGYLLSRPLPASEYAALVRR 698 >UniRef50_Q9I310 Uncharacterized signaling protein PA1727 n=74 Tax=Proteobacteria RepID=Y1727_PSEAE Length = 685 Score = 671 bits (1733), Expect = 0.0, Method: Composition-based stats. Identities = 138/691 (19%), Positives = 254/691 (36%), Gaps = 41/691 (5%) Query: 79 ELGFYETLSLTANFIIIIILCWGGYRVFTPRRNNVSHGDTRLISQRIFWQIVFPATLFLI 138 + Y + + + I+ I+ + + R ++ G L F + Sbjct: 2 LISSYNQVLVAFSLIVAILASYTALDMAG--RVTLAKGREALSW---LIGGAFAMGFGIW 56 Query: 139 LFQFAAFVGLLASRENLVGVMPFNLGTLINYQA----LLVGNLIGVPLCYFIIRVVRNPF 194 F + + L L+ + L + +P + + Sbjct: 57 SMHFVGMLAFSLPIPLGYDLGLTLLSLLLAVGSSAFALWLVCQAELPWQRLALGALLMGS 116 Query: 195 YLRSYYSQLKQQVDAKVTKKEFALWLLALGALLLLLCMPLNEKSTIFSTNYTLSLLLPLM 254 + + + + LWL ++L+ + F + ++ + Sbjct: 117 GIAAMHYTGMAALLMMPGIVYDPLWLGL--SILIAVIASGAALWIAFRLRHGSRRIVLVR 174 Query: 255 MWGAMRYG----YKLISLLWAVVLMISIHSYQNYIPIYPGYTTQLT-ITSSSYLVFSFIV 309 A+ G + + A + I G+ L + + + + + IV Sbjct: 175 AGAALVMGCAIVGMHYTGMAAAQFPLGSFCGAAGRGIDNGWLAVLVIVITLAVIAIALIV 234 Query: 310 NYMA--------VLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRDA--------PW 353 + + VLAT R + +LA D + LPN L+ L A Sbjct: 235 SVLDSRLEARTSVLATSLARANRELIQLALHDNLTKLPNRMLLDDRLEQAIQQAIRDDRR 294 Query: 354 SALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTES 413 A+ ++ + G + + YG L +++ + + + + +L G++ L + Sbjct: 295 FAVLFMDLDGFKAVNDAYGHHLGDLLLIEVAERIRANVRAQDTIARLGGDEFVLLIEA-R 353 Query: 414 HQERITALDSHL---KQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSI 470 L L + ++ + + L+ + A + Sbjct: 354 EPADAATLAEKLVKRISQPYQISRHEVRISASIGIALYPGDGQTRHELMINAD--AAMYH 411 Query: 471 VTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEIL 528 + N + ++++ +++ L+QALE L QP + E L Sbjct: 412 AKDQGRNGYCFFESSMNANAQEQLQLLHDLRQALERRQLVLHYQPKVLAPNGPMIGVEAL 471 Query: 529 LRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMP-AHRFAINLSP 587 LR + LI+P FLP+A + GL I WV++ + M A+NLS Sbjct: 472 LRWEHPQHGLITPGQFLPLAEKTGLIVQIGEWVLDEACRQMRLWLDGGHADWNIAVNLSA 531 Query: 588 TSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDD 647 A V L ++ +E LI EVTES A+ + + + L+ L +G I+IDD Sbjct: 532 LQFAHAGLVDSVRNALLRHSLEPSHLILEVTESTAMRDADASLVILEQLSAMGVGISIDD 591 Query: 648 FGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVEN 707 FGTGY+S LK + A LKID FI + +S D IV++I L R + +VAE VE Sbjct: 592 FGTGYSSLLYLKRLPASELKIDRGFINELAHDSDDAAIVSAIVALGRTLNLKIVAEGVET 651 Query: 708 EEIREAVLSLGIDYMQGYLIGKPQPLIDTLN 738 E +E + LG + +QG+L+G+P P L Sbjct: 652 EAQQEFLTRLGCNSLQGFLLGRPMPAEQLLA 682 >UniRef50_B9M6C9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. FRC-32 RepID=B9M6C9_GEOSF Length = 845 Score = 671 bits (1733), Expect = 0.0, Method: Composition-based stats. Identities = 111/474 (23%), Positives = 186/474 (39%), Gaps = 19/474 (4%) Query: 281 YQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPN 340 + + + V I V T + + I+ A D + L N Sbjct: 376 RTKWGYSLNVEISSSPFVERN-NVMGSIHIVRDV--TESKKMEDEIRYQATHDILTGLAN 432 Query: 341 VRALNRAL--------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLE 392 L R A+ +L + + + + G + Q +S L + Sbjct: 433 RMLFMDHLALSISQGHRYNEIQAVMFLDLDRFKSINDSLGHAAGDKLLQLISGRLKECVR 492 Query: 393 PGEDVYQLSGNDLALRLNTESHQERITALDSHLKQ---FRFFWDGMPMQPQIGVSYCYVR 449 + V ++ G++ + + +H E TA+ + + F DG + I + Sbjct: 493 ETDTVARIGGDEYNILITQMAHPEDATAIANKILSSMNKPFAIDGHQLHVTISIGISLYP 552 Query: 450 SPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHF 509 + LL + L N + L ++V M NRL+QALE + Sbjct: 553 TDGEDAETLLKNADIA--LYHAKEQGRNNYQFYNPALNTRTLERVKMENRLRQALERHEL 610 Query: 510 FLMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQ 567 ++ QP M E L+ L+SP F+P+A E G + ID WV+E Sbjct: 611 VVLYQPQVAMDTGQVTGAEALVYWLHPELGLLSPGHFIPMAEEIGFITDIDEWVLETACA 670 Query: 568 FMAENRA-KMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNV 626 + + +N+S + +V ++L + L E+TE A+ ++ Sbjct: 671 QNKAWQDEGYRSFNVTVNMSSKQFRRPDLVDQVRRVLNATGLPPRFLELEITEGTAMKDI 730 Query: 627 KQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIV 686 + +L L + AIDDFGTGY+S + LK + LKID SFI + ++ D IV Sbjct: 731 EYTIPSLNTLTGMEVGFAIDDFGTGYSSLSCLKKLPIRKLKIDKSFIFGVNTDPNDKAIV 790 Query: 687 ASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEI 740 A+I +A K+ V+AE VE+ + E + D MQG+L +P P D I Sbjct: 791 ATIIAMAHNLKLEVIAEGVEDADQLEFLHQNHCDQMQGFLYSRPIPAEDFRRLI 844 >UniRef50_Q47ES6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Bacteria RepID=Q47ES6_DECAR Length = 832 Score = 671 bits (1733), Expect = 0.0, Method: Composition-based stats. Identities = 113/471 (23%), Positives = 196/471 (41%), Gaps = 28/471 (5%) Query: 301 SYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRDA--------P 352 + + T ++ I RLA+ D + HLPN R + L A Sbjct: 357 DGQTIGIVGFNQDI--TDRKRNEEEIHRLAFYDSLTHLPNRRLMFDRLEHALIGSARRKS 414 Query: 353 WSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTE 412 AL + + + L +G + + +++ L + G+ +L G++ + L Sbjct: 415 HGALLLIDLDNFKFLNDTHGHEVGDELLLEVAKRLKTCIRQGDTAARLGGDEFVVILEDI 474 Query: 413 SHQE----RITALDSHLKQ---FRFFWDGMPMQPQI------GVSYCYVRSPVNHIYLLL 459 + + H++ F P + I + + LL Sbjct: 475 DGAGNGTIQAELIAGHIQAQLNHPFSLVRPPERLSIDYRCASSIGIALFDDTMVTAKELL 534 Query: 460 GELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGM 519 +T + A N R +Q + + A+ L++A++ F L Q Sbjct: 535 RRADTA--MYQAKAAGRNTLRFFDPEMQAAVTHRAALETELRKAIDEQQFHLCFQVQMDQ 592 Query: 520 RGD-VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAK--M 576 G E LLR + I P SF+P+A E GL I WV+ + +A + Sbjct: 593 SGRPTGGEALLRWEHPTRGTIPPASFIPLAEETGLIVPIGQWVLATACRQLAAWSQQPET 652 Query: 577 PAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHL 636 A+N+S QARF ++ LL + A +L E+TES L + + + L Sbjct: 653 SGLTLAVNVSARQFRQARFTDQLRDLLLQTGAPATRLKLELTESMMLEDTEAIIGRMAEL 712 Query: 637 QELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMK 696 ++LG + ++DDFGTGY+S A LK + + LKID SF+R+++++ D I +I L + Sbjct: 713 KQLGIRFSLDDFGTGYSSLAYLKRLPLNQLKIDQSFVRDVLTDPNDAAIAETIVALGNIL 772 Query: 697 KMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIRESA 747 + V+AE VE + + ++G QGYL G+P PL++ ++ A Sbjct: 773 GLEVIAEGVETDAQWRFLANVGCKNYQGYLFGRPLPLLEFEQFLQGCDAGA 823 >UniRef50_C5T1I4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T1I4_ACIDE Length = 830 Score = 671 bits (1733), Expect = 0.0, Method: Composition-based stats. Identities = 110/487 (22%), Positives = 190/487 (39%), Gaps = 24/487 (4%) Query: 274 LMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVD 333 + T + V S M + T ++ + I+RLA+ D Sbjct: 346 WQCEYRVSMPDGSVRWHITNAIPHREPDGSVVSH-GFTMDI--TDRKRAEQEIERLAFYD 402 Query: 334 PVVHLPNVRALNRAL--------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSH 385 + LPN R L L R + AL ++ + + L G + +++ Sbjct: 403 ALTGLPNRRMLLDRLQRAVAATSRTQQFGALLFIDLDNFKDLNDTLGHDMGDHLLSQVAA 462 Query: 386 WLSPLLEPGEDVYQLSGNDLALRLNTESHQ-----ERITALDSHLKQ---FRFFWDGMPM 437 L + + V + G++ + L T + + + L F G Sbjct: 463 RLLACVRETDTVARFGGDEFVVMLETLRPELTEAASQAEIVAEKLLASLNQPFALGGQQH 522 Query: 438 QPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMM 497 + + LL + + A N QR +Q + + + Sbjct: 523 YSTPSIGITLFGDERLSVDELLKRADLA--MYQAKGAGRNTQRFFDPDMQAAVNARSNLE 580 Query: 498 NRLQQALEHNHFFLMAQPITGMRGDV-YHEILLRMKGENDELISPDSFLPVAHEFGLSSS 556 L+Q L + QP+ R + E L+R + +ISP F+P+A + GL Sbjct: 581 ADLRQGLARGELCVYYQPVVDHRARLLGVEALVRWRHPVRGMISPADFIPLAEQTGLILP 640 Query: 557 IDMWVIEHTLQFMAEN--RAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLI 614 + V++ + R + ++N+S Q F EV Q L + +L Sbjct: 641 LGQQVLQTACGQLQRWGERKQTRHLSVSVNVSARQFRQPGFVAEVLQTLQGCGADPRKLK 700 Query: 615 FEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIR 674 E+TES L +V+ ++ L+ G A+DDFGTGY+S + LK + D +KID F+R Sbjct: 701 LELTESLLLGDVEDTIARMEQLKREGVGFALDDFGTGYSSLSYLKRLPLDQVKIDQGFVR 760 Query: 675 NIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLI 734 +++++ D IV +I LA+ + VVAE VE + G + QGYL G+P P+ Sbjct: 761 DVLTDPNDAAIVRTILALAQSLDLEVVAEGVETTGQLAFLRLHGCEGFQGYLFGRPGPVE 820 Query: 735 DTLNEIE 741 D + Sbjct: 821 DIDAYLS 827 >UniRef50_Q2SFK1 FOG: EAL domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SFK1_HAHCH Length = 1092 Score = 671 bits (1732), Expect = 0.0, Method: Composition-based stats. Identities = 108/480 (22%), Positives = 200/480 (41%), Gaps = 19/480 (3%) Query: 277 SIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVV 336 + +Y+ ++ +T + V F+ V T +++ D + Sbjct: 461 LLKNYRKDGTLFWSELKVAPVTDAKGDVTHFVAILNDV--TESIQYQAQLEYKTKYDNLT 518 Query: 337 HLPNVRALNRALRDA--------PWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLS 388 LPN LN ++ A AL + + + + G Q +++ L Sbjct: 519 GLPNRNLLNDRIQQAIAYAARRNKGFALAVFDLDNFKYINDSMGHETGDQLLTEVAESLR 578 Query: 389 PLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLKQF---RFFWDGMPMQPQIGVSY 445 L G+ + +L G++ + ++ E + + + ++Q + + Sbjct: 579 SCLREGDTLARLGGDEFVILMHKEECDRPLGLMLNRIQQLVSQPRRLKDKEILVTPSIGV 638 Query: 446 CYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALE 505 C LL +T + N + ++ +V M L++ +E Sbjct: 639 CQFPEDGEDASTLLKNADTA--MYKAKERGRNRICSYTQEMNESIQKRVQMEQDLRRGIE 696 Query: 506 HNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIE 563 + L QP G V E L+R + + ++ P F+P+A E GL + +D WV+ Sbjct: 697 NGELELYYQPQLDPHGGGAVGLEALVRWRKGDR-MVPPLEFIPIAEETGLITEVDAWVLR 755 Query: 564 HTLQFMAENRAKMPAH-RFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNA 622 + R + ++NLSP A V ++L + IE L EVTES Sbjct: 756 AACLQLKMWRDQKQQMVPVSVNLSPRQFQDAYCVELVRKVLQESNIEPGCLKIEVTESMV 815 Query: 623 LTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLD 682 + N ++A T+ L+ +G Q+++DDFGTGY+S + LK D LKID SF+RN+ ++ + Sbjct: 816 MHNAEEALRTMTQLKAMGVQLSMDDFGTGYSSLSYLKMFPFDQLKIDKSFVRNVTNDPQE 875 Query: 683 YQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEP 742 I+ +I L + + +VAE VE E ++ G D +QGY P P+ ++ ++ Sbjct: 876 AAIIRAIIGLGKTLGIKIVAEGVETVEQYSFLVRAGCDLIQGYFYSPPLPVAACMHFLQE 935 >UniRef50_Q2BPB1 Regulatory component of sensory transduction system n=2 Tax=Gammaproteobacteria RepID=Q2BPB1_9GAMM Length = 885 Score = 671 bits (1732), Expect = 0.0, Method: Composition-based stats. Identities = 116/582 (19%), Positives = 229/582 (39%), Gaps = 29/582 (4%) Query: 187 IRVVRNPFYLRSYYSQLKQQVDAKVTKKEFALWL----LALGALLLLLCMPLNEKSTIFS 242 + + P + + ++ A+ + + +++ L + + Sbjct: 305 LDMDGEPQGIVGISRDITEKRKAEERILTLSQAVEQSPVSVVITNLKGEVEYVNSTFESV 364 Query: 243 TNYTLSLLLP--LMMWGAMRYGYKLISLLWAVVLMISIH-----SYQNYIPIYPGYTTQL 295 T Y+ + +L + + + + +WA ++ + + I+ Sbjct: 365 TGYSQAEVLGKDSSILKSGKTPPGRYADMWAKLVQGESWQGEFQNKKKNGEIFWEQAHIA 424 Query: 296 TITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNV--------RALNRA 347 + + V F+ V T+Q+A +I A+ D + LPN ++ A Sbjct: 425 PVLDAEGEVRHFLAVKQDV--TKQKAQEEKILHQAHFDGLTELPNRFLAMHRLETMMHEA 482 Query: 348 LRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLAL 407 R+ A+ +L + + + G + + + + L + + + +L G++ + Sbjct: 483 KRNQHQIAVLFLDMDDFKKVNDTLGHDMGDKILVEAAKRLQGSVRDSDTIGRLGGDEFIV 542 Query: 408 RLNTESHQERITALDS-HLKQFR--FFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNT 464 +N E+ + L+QFR DG + + + LL ++ Sbjct: 543 LINHLERPEQALPIAQNLLQQFRSSLTIDGRDILLTMSIGIALYPGDGTTPSELLRNADS 602 Query: 465 VAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD-- 522 + A N + E ++ + +L AL+ N L+ QP+ ++ Sbjct: 603 A--MYHSKAAGRNSFHFYTQEMNIEANRRLQLEEQLHNALDRNELRLLYQPVVDLKTRKI 660 Query: 523 VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKM-PAHRF 581 V E LLR + ISP+ F+PVA GL I +V++ L+ + P Sbjct: 661 VGAEALLRWDSKELGAISPEEFIPVAEHTGLIVEIGKFVLDDALRTTSRWIKTFIPDFHI 720 Query: 582 AINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGC 641 AINLSP + + Y +E L E+TE ++ + + L + G Sbjct: 721 AINLSPRQFRDPHLIDNIESFVNSYGLEGRNLELEITEGVLMSQHADVEEAIAKLTQKGI 780 Query: 642 QIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVV 701 I++DDFGTGY+S + L++ ++LK+D SFI +I ++ D ++V + +A + V+ Sbjct: 781 SISMDDFGTGYSSLSYLRSYPFNILKVDRSFINDISVDAADLELVNASIDMAHGLGLKVI 840 Query: 702 AEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPI 743 AE VE EE +L D QGY KP P + ++ Sbjct: 841 AEGVETEEQTALLLRKNCDMAQGYYFSKPIPADELEEILKKQ 882 >UniRef50_Q087W4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Shewanella frigidimarina NCIMB 400 RepID=Q087W4_SHEFN Length = 1144 Score = 670 bits (1731), Expect = 0.0, Method: Composition-based stats. Identities = 110/535 (20%), Positives = 213/535 (39%), Gaps = 25/535 (4%) Query: 232 MPLNEKSTIFSTNYTLSLLLP--LMMWGAMRYGYKLISLLWAVV-----LMISIHSYQNY 284 + + + Y S ++ M + L LW + + + + Sbjct: 602 IEYVNSAFEKISGYAASEVIGQSASMLKSGLTPKSLYKQLWDAISTGHAWQGELQNRKKN 661 Query: 285 IPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRA- 343 I+ + I ++ + ++ V T+ + +I A+ D + LPN Sbjct: 662 GDIFWEHAHIAPIFDNAGVTKHYLALKQDV--TQYKQQEEKILHQAHYDSLTGLPNRLLS 719 Query: 344 -------LNRALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGED 396 L A R A+ +L + + + G + + + + L + + Sbjct: 720 LDRLSQMLKDAHRAKNNVAVLFLDLDDFKKVNDTMGHSVGDELLIQAAVRLKNTIRESDV 779 Query: 397 VYQLSGNDLALRLNTESHQERITALDSHLKQF---RFFWDGMPMQPQIGVSYCYVRSPVN 453 V +L G++ + L+ + + + S L + F + + I + Sbjct: 780 VGRLGGDEFIIILSNINEPIEVEIIASKLLEQFYQPFRLENRELVSTISIGIALYPLDSE 839 Query: 454 HIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMA 513 LL + ++ + + N + ++ ++ + +L+ AL+ F + Sbjct: 840 DPKELLRQADSA--MYHSKDRGRNTYNFYTHQMNHDMDRRLKIEEQLRSALKQKEFEVYF 897 Query: 514 QPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAE 571 QP ++ + E LLR ++PD F+P+A + GL SI +VIE + Sbjct: 898 QPFVDIKSRKIIGAEALLRWNNALLGQVTPDEFIPIAEQTGLIVSIGQYVIEVAFATAKK 957 Query: 572 NRAKMPA-HRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQ 630 + + AIN+SP + F ++ L K+QI A + E+TE L++ Sbjct: 958 WQQTYNPYFKIAINVSPKQFRENTFVDMLNIQLDKHQIHASTIELEITEGVLLSSDAVID 1017 Query: 631 ITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASIC 690 L + ++G I++DDFGTGY+S + L++ + LK+D SFI +I + D ++V + Sbjct: 1018 SNLISINDIGVSISMDDFGTGYSSLSYLRSYPFNTLKVDKSFINDITVDPGDLELVGAAI 1077 Query: 691 HLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIRE 745 + + VVAE VE EE + +L DY QGYL KP P + + Sbjct: 1078 AMGHGLNLTVVAEGVETEEQYHLLNALKCDYGQGYLFSKPLPQAAFEALLLKQAK 1132 >UniRef50_A1S1U8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Shewanella amazonensis SB2B RepID=A1S1U8_SHEAM Length = 1069 Score = 670 bits (1731), Expect = 0.0, Method: Composition-based stats. Identities = 115/537 (21%), Positives = 217/537 (40%), Gaps = 26/537 (4%) Query: 232 MPLNEKSTIFSTNYTLSLLLP--LMMWGAMRYGYKLISLLWAVV-----LMISIHSYQNY 284 + L + T Y++ + + + R L +W + I + + Sbjct: 527 IELINPAFSQITGYSIEEVKGRNPSILSSHRNPPHLYDAMWESLRSTGKWEGEIWNRRKD 586 Query: 285 IPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRAL 344 +YP Y + + I +M + +R++ + I A D + LPN + L Sbjct: 587 GEVYPEYLAITLVRDDEGQIVHHIGLFMDI--SRRKQYEQDIWYKANFDTLTDLPNRKLL 644 Query: 345 NRALRD--------APWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGED 396 + L A+ L + + + G + ++ L ++ + Sbjct: 645 SERLGHELKMAEHDGRKLAVMVLDLDRFKYINDTQGHDCGDLLLKAVAKRLQTVMGSTDF 704 Query: 397 VYQLSGNDLALRLNTESHQERITALDSHLKQF---RFFWDGMPMQPQIGVSYCYVRSPVN 453 + +L G++ + L + + + L Q F + M + Sbjct: 705 IARLGGDEFVIVLPRLAQEHAVEQYAKRLLQSMGDPFKVEQGSMSVSASLGIGLYPQDGL 764 Query: 454 HIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMA 513 + LL T + + N + + L +++ M L++A+ ++ F L Sbjct: 765 DVETLLSNAETA--MYGAKDEGRNHFKYFTQEMNLALIERLGMERDLRRAVANDEFCLFY 822 Query: 514 QPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAE 571 QP+ M E LLR + L+SP F+PVA + GL + WV++ L +A Sbjct: 823 QPVVDMESGEVTSLEALLRWQDPEQGLVSPVRFIPVAEDMGLMGELGQWVMDKALADLAR 882 Query: 572 NRAKMPAHRFAINLSPTSVC--QARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQA 629 AIN+S + ++ L+++ I L E+TES L N Sbjct: 883 LHTLGFGLSMAINVSACQCHCKRQSLDEQLRSALSRHGIAPRHLHVEITESLLLDNSHHC 942 Query: 630 QITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASI 689 TL ++++LGC I +DDFGTGY+S + LK +KID SF+ + D +V +I Sbjct: 943 LDTLNNIRDLGCAIYLDDFGTGYSSLSYLKKFPISAIKIDKSFVEQLPGCESDASLVRAI 1002 Query: 690 CHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIRES 746 ++++ M +VAE +E+++ + + +LG + QGYL +P P + L +E + S Sbjct: 1003 VNMSKSLGMKLVAEGIESKDQQAFLQALGSQFGQGYLYSRPLPFEELLPWLERHQHS 1059 >UniRef50_Q47AR1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47AR1_DECAR Length = 655 Score = 670 bits (1730), Expect = 0.0, Method: Composition-based stats. Identities = 123/563 (21%), Positives = 213/563 (37%), Gaps = 30/563 (5%) Query: 200 YSQLKQQVDAKVTKKEFALWLLALGALLLLLCMPLNEKSTI-----FSTNYTLSLLLP-- 252 Y QL ++ + ++L ++ T Y + Sbjct: 83 YRQLLATKRQVEAGLALQRLIVDHASEAMMLTDSAQRILSVNSAFEQITGYAGKDVFGKT 142 Query: 253 LMMWGAMRYGYKLISLLWA-----VVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSF 307 M A G +W I + IYP I + F Sbjct: 143 PTMLSAGHQGLASHRNVWDFVAENGSWEGEIWDRRKDGTIYPKQMRITAICEDGVQLSHF 202 Query: 308 IVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRD--------APWSALCYL 359 + + + + RA R++ LA DP+ +LPN AL+ L AL + Sbjct: 203 VAVFSDI--SESRAQAERLEYLARHDPLTNLPNRLALDAHLDTLLEGATPGINRLALLII 260 Query: 360 RIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERIT 419 + + + + G + +L+ L ++ + +++L G++ + ++ ++E + Sbjct: 261 DLDNFKTINDSLGHHAGDRLLSELARRLGAQMDLTKRLFRLGGDEFVVVVDQLINEEAVI 320 Query: 420 ALDSHL---KQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPE 476 L L DG + + L+ +T + Sbjct: 321 ELVQQLAGGIGDPCNIDGHVLHCTSSIGISLYPEDGRDAQALIRNADTA--MYYAKANGR 378 Query: 477 NMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGE 534 N + + ++ + + L AL N L QP + V E L+R + Sbjct: 379 NNHKFFTEPMNAAANKRLHLESELWCALAENQLVLYYQPQIDLLSGKVVGVEALVRWRHP 438 Query: 535 NDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAEN-RAKMPAHRFAINLSPTSVCQA 593 LI P F+PVA E GL + WV+ + E A + A+N+S Q Sbjct: 439 LRGLIPPAEFIPVAEECGLILPLGHWVLLTACRQAREWLDAGIDMGEMAVNISAHQFRQP 498 Query: 594 RFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYA 653 F V +LA+ + +L E+TES + V A TL L+ +G ++AIDDFGTGY+ Sbjct: 499 EFISSVQAILAETGLPTGRLELEITESTIMHEVDAAIQTLAQLRAMGIKLAIDDFGTGYS 558 Query: 654 SYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREA 713 S A L+ D LKID SF+ ++ ++ +V SI L R + +VAE VEN E Sbjct: 559 SLAYLRRFPLDRLKIDRSFLADVETDPDAASLVTSIVLLGRSLGLQLVAEGVENFAQAEF 618 Query: 714 VLSLGIDYMQGYLIGKPQPLIDT 736 + +L + +QG+ +P + Sbjct: 619 LRTLECERVQGFHFYQPVCAEEV 641 >UniRef50_C5S8G6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S8G6_CHRVI Length = 861 Score = 670 bits (1729), Expect = 0.0, Method: Composition-based stats. Identities = 121/525 (23%), Positives = 219/525 (41%), Gaps = 25/525 (4%) Query: 236 EKSTIFSTNYTLSLLLP--LMMWGAMRYGYKLISLLW-----AVVLMISIHSYQNYIPIY 288 S + T Y+ L + + LW I + + +Y Sbjct: 198 NASFVRVTGYSREEALGRTPTLLKSGLQDAAFYRALWRDLNETGRWHGEIWNRKKSGELY 257 Query: 289 PGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNV------- 341 P + S V +I ++ + T + R++ LA+ D + LPN Sbjct: 258 PEILHINAVQDPSGRVTHYIGMFIDI--TDLKNSQSRLENLAHYDVLTGLPNRLLLGYRL 315 Query: 342 -RALNRALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQL 400 +AL+ A R +A+C+L + +++ ++G + + L L + V +L Sbjct: 316 RQALDDAQRHERLAAVCFLDLDNFKLVNDHHGHETGDRLLIDIGRRLRDTLRSNDTVARL 375 Query: 401 SGNDLALRLNTESHQERITALDSHLKQ---FRFFWDGMPMQPQIGVSYCYVRSPVNHIYL 457 G++ + LN +QE + + L D + + + V + Sbjct: 376 GGDEFVILLNDLRNQEELDNVLVRLLDGVAHPVRIDALQIVITVSVGVTIYPLDDHDPDT 435 Query: 458 LLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPIT 517 LL + + N + ++ + + R++QAL+H F L QP Sbjct: 436 LLRHADQA--MYQAKQMGRNRYQLFDPEAANAMQSRHRELERIRQALQHGEFQLYYQPKV 493 Query: 518 GMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAK 575 MR V E L+R + L+ P FLP+ L + WV+ L + + A+ Sbjct: 494 DMRLGQVVGMEALIRWRHPERGLVPPLQFLPLIEASPLIVEVGEWVLHEALGQIRQWCAE 553 Query: 576 MPAHRFAINLSPTSVCQARFPVEVSQLLAKY-QIEAWQLIFEVTESNALTNVKQAQITLQ 634 ++N++ Q F + + +LA++ + L E+ ES AL +++ + + Sbjct: 554 GRPLTISVNIAAHHFQQRDFVLRLQTILAEHPEATPRLLELEILESAALEDIQSVRGIMT 613 Query: 635 HLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLAR 694 Q +G + A+DDFGTGY+S + LK + A+ LKID SF+RN++ +S D I+ + LA+ Sbjct: 614 ACQAMGVRFALDDFGTGYSSLSYLKQLPAETLKIDQSFVRNMLEDSEDLAIIEGVIGLAK 673 Query: 695 MKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNE 739 + + V+AE VE E ++ G D+ QGY IG+P P Sbjct: 674 VFRKEVIAEGVETPEQGLLLMRFGCDHAQGYGIGRPMPAEQIPAW 718 >UniRef50_C4ZM30 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4ZM30_THASP Length = 1002 Score = 670 bits (1729), Expect = 0.0, Method: Composition-based stats. Identities = 125/532 (23%), Positives = 220/532 (41%), Gaps = 32/532 (6%) Query: 232 MPLNEKSTIFSTNYTLSLLLPL--MMWGAMRYGYKLISLLWAVVLMISIH-----SYQNY 284 + ++ + +T YT + + + A + + LWA + + + + Sbjct: 471 IEYVNEAFVRTTGYTAAEAIGQNPRLLNAGKTSAATYADLWATLGRGEVWRGEFINTRKD 530 Query: 285 IPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRAL 344 Y T I + V ++ + T +R RI++LAY D + LPN + Sbjct: 531 GGTYTELATIAPIKQADGSVSHYVAIKEDI--TGRREAEARIRQLAYYDTLTGLPNRSLM 588 Query: 345 NRALRDA-----PWSA---LCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGED 396 LR A A L L I ++L G + ++++ L L + Sbjct: 589 WDRLRHAIAASARSGASGMLMLLDIDHFKLLNDTQGHEVGDALLREVAQRLRGALREEDT 648 Query: 397 VYQLSGNDLALRLNTESHQER-----ITALDSHLK-----QFRFFWDGMPMQPQIGVSYC 446 V ++ +D A+ + + HL P + Sbjct: 649 VARVGDDDFAIVVENLGADRDEAIGRAEKIAEHLHRCVTAPCELGLASGPYHVGASLGLT 708 Query: 447 YVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEH 506 R +L + ++ + N+ R + +Q + + + +L+ AL Sbjct: 709 LFRGRNAAADAVLKQAEVA--VARAKDDGRNLIRFFSEAMQAVVAARAELELKLRAALAC 766 Query: 507 NHFFLMAQPITGMRGDV-YHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHT 565 N F L QP G V E L+R E+ISP +F+P+A E GL I WV+E Sbjct: 767 NGFRLYYQPQLDRNGRVIGAEALIRCFDAEGEMISPAAFIPLAEETGLIVPIGEWVLETA 826 Query: 566 LQFMAENRA--KMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNAL 623 + + +IN+S Q F +V+ + +++I L E+TES + Sbjct: 827 CAQLRAWQRTPSTAGLSLSINVSARQFHQPDFVGKVAAAIERHRIRPGGLEIELTESVVI 886 Query: 624 TNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDY 683 +++ + ++ ++ LG + A+DDFGTGY+S + LK + D LKID F+R++ ++ Sbjct: 887 GDIETTVLRMRQIKALGVRFALDDFGTGYSSLSYLKRLPFDQLKIDQMFVRDMEKDTSSE 946 Query: 684 QIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLID 735 IV +I L+R + VVAE VE E +L+ G + QGYL G+P P+ D Sbjct: 947 AIVRAILALSRSLDLKVVAEGVETAAQHELLLTRGCELFQGYLFGRPVPIED 998 >UniRef50_A0KIJ4 MorA n=2 Tax=Aeromonas RepID=A0KIJ4_AERHH Length = 838 Score = 669 bits (1728), Expect = 0.0, Method: Composition-based stats. Identities = 115/492 (23%), Positives = 201/492 (40%), Gaps = 23/492 (4%) Query: 274 LMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVD 333 YP + + + F++ + + + ++ RRIQ LAY D Sbjct: 336 WQGETQRLHADGYPYPQWEIVTPVQDDRGEISHFVICFEDI--SERKEAERRIQDLAYYD 393 Query: 334 PVVHLPNVRALNRAL--------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSH 385 + LPN R L+ L RD AL ++ + + + + G ++++ Sbjct: 394 ELTGLPNRRQLHETLAHAFGEASRDYLIGALLFIDLDHFKTINDSLGHATGDWLLKEVAS 453 Query: 386 WLSPLLEPGEDVYQLSGNDLALRLNTESH-----QERITALDSHLKQ---FRFFWDGMPM 437 L L+ G+ + +L G++ L L + S + + + L + G + Sbjct: 454 RLKRLVRQGDCLARLGGDEFVLLLPSLSASPPQAEMQADLIAERLISEIAAPYNHAGQVL 513 Query: 438 QPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMM 497 V + LL + +T + +A +R +Q + ++ + Sbjct: 514 HIGASVGITLFPGREQGVDDLLKQADTA--MYQAKSAGRKTRRFFDASMQLQADRRLLIH 571 Query: 498 NRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSS 555 N L+ AL L QP + G + E L+R + L+SP F+P+A E L Sbjct: 572 NELRSALNQQELTLYYQPQHMVEGGDIIGVEALIRWQPPGRALVSPAEFIPIAEETDLIV 631 Query: 556 SIDMWVIEHTLQFMAENRAKMPAH-RFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLI 614 I WV+ + ++N+S F + +LA ++ L Sbjct: 632 DIGNWVLYEACAQYVRWEENGIHIPQLSVNVSAKQFHATDFVDRIHDVLASTGMDPASLN 691 Query: 615 FEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIR 674 E+TES L + + + L+ LG AIDDFG GY+S + LK + AD LKID SFI+ Sbjct: 692 LEITESVVLGHAEDTISKMSELKALGISFAIDDFGAGYSSLSYLKRLPADELKIDRSFIQ 751 Query: 675 NIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLI 734 +I + + IV ++ +AR V AE VE+ + E + + G + QGYL KP P+ Sbjct: 752 DIPRDGDNMAIVEAVIAMARHMGFNVTAEGVESRQQLEFLQAQGCHFYQGYLASKPLPVP 811 Query: 735 DTLNEIEPIRES 746 ++ + S Sbjct: 812 YLERYVQRLARS 823 >UniRef50_C6MBX5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MBX5_9PROT Length = 891 Score = 669 bits (1728), Expect = 0.0, Method: Composition-based stats. Identities = 102/437 (23%), Positives = 183/437 (41%), Gaps = 16/437 (3%) Query: 318 RQRAVVRRIQRLAYVDPVVHLPNVRALNRALRD--------APWSALCYLRIPGMEMLVK 369 + +RI +A D + LPN L + A+ ++ + + + Sbjct: 440 EGKEAEKRIIEMATHDALTGLPNRYLLRDRIEQVLVHDTRLQRQMAVLFIDLDHFKTIND 499 Query: 370 NYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLKQ-- 427 + G + + ++ L + + V + G++ + LN+ + + + Sbjct: 500 SLGHEIGDLLLKAVADRLKSCVRNEDTVARQGGDEFIVVLNSIAESLDAAKVAQKILDSF 559 Query: 428 -FRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYL 486 F + + + LL + + N + L Sbjct: 560 ALPFHIHKNELHIDGSIGIAVFPDDGVNAETLLKNSDVA--MYHAKKNGRNNYQFFTDEL 617 Query: 487 QRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDV--YHEILLRMKGENDELISPDSF 544 + ++ + L+ ALE N L QP+ M E LLR + +LI+PD F Sbjct: 618 NKSAYERHILGLDLRYALERNELLLYYQPVMDMPSHNLYGVEALLRWRHPEQKLITPDKF 677 Query: 545 LPVAHEFGLSSSIDMWVIEHTLQFMAENR-AKMPAHRFAINLSPTSVCQARFPVEVSQLL 603 + +A E GL I WVI + + R AINLS +S++L Sbjct: 678 INLAEETGLIIPIGEWVIRTVCLQIKAWQEQGFYVPRVAINLSARQFRDKDLIKNISRIL 737 Query: 604 AKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNA 663 ++ ++A + E+TES + N+++ TL L +G I+IDDFGTGY+S + LK Sbjct: 738 SETGVKAKHIALEITESMLIDNIEKVVETLNRLDAMGLHISIDDFGTGYSSLSYLKQFPI 797 Query: 664 DLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQ 723 LKID SF+R++V++ D IVA+I +A +M V+AE +E EE + +++ ++ Q Sbjct: 798 HTLKIDRSFVRDLVTDKNDRTIVAAIIAMAHSLEMEVIAEGIEIEEQLDFLVTQKCNHYQ 857 Query: 724 GYLIGKPQPLIDTLNEI 740 GY KP + + + Sbjct: 858 GYYFSKPVTVSEIELML 874 >UniRef50_Q39WZ5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=Q39WZ5_GEOMG Length = 739 Score = 669 bits (1727), Expect = 0.0, Method: Composition-based stats. Identities = 108/479 (22%), Positives = 193/479 (40%), Gaps = 19/479 (3%) Query: 283 NYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVR 342 + + S ++ + T ++ ++ RLA+ D + LPN Sbjct: 263 KDGRSVIVEGSLSC---AHGGDESSVIWSICRDITERKHAEEQLYRLAHHDTLTGLPNRI 319 Query: 343 ALNRALRDAP--------WSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPG 394 L+ A A+ +L + +++ G + Q+++H ++ + Sbjct: 320 LFMDRLQQAKALANRYRYQVAVLFLDLDRFKIINDTLGHPVGDHLLQQVAHRIAGCVREV 379 Query: 395 EDVYQLSGNDLALRLNTESHQERITALDSHLK---QFRFFWDGMPMQPQIGVSYCYVRSP 451 + V ++ G++ + L E + + + F D + + S Sbjct: 380 DTVARIGGDEFTIILVNVDTVEDVKRMGQKILKTLAAPFNIDTHELFVTASIGISLFPSD 439 Query: 452 VNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFL 511 +++ L+ + + + V N + + + ++ + L++AL++ F + Sbjct: 440 GDNLDQLVKKADIA--MYCVKGEGRNNVQFYSPQMDANADKRLLLETSLRKALDNREFRV 497 Query: 512 MAQPITGM--RGDVYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFM 569 QP + + E L+R L+SP F+P+A E GL I WV+ Sbjct: 498 YYQPKVDIVSKRITAMEALIRWDHPILGLVSPGEFIPLAEETGLIIPIGEWVLRAACFQN 557 Query: 570 AEN-RAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQ 628 E R +P R A+NLS Q + +L + + A L E+TES + N Sbjct: 558 CEWVRQGIPPMRVAVNLSGYQFQQKNLLETIRGILDETGLTADLLELEITESVIMQNPDF 617 Query: 629 AQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVAS 688 A L L++LG I+IDDFG GY+S A LK + + LKID SF+R++ NS D I + Sbjct: 618 AVSVLNQLRDLGVHISIDDFGIGYSSLAHLKRFSVNTLKIDKSFVRDVEINSADAAIATA 677 Query: 689 ICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIRESA 747 I + + V+AE VE E + D +QGYL P P + SA Sbjct: 678 IIAMGNSLNLKVIAEGVETEGQLSFLSDNKCDEVQGYLFSTPMPPEKVAEFMREHGRSA 736 >UniRef50_Q1K3I2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K3I2_DESAC Length = 791 Score = 669 bits (1727), Expect = 0.0, Method: Composition-based stats. Identities = 101/467 (21%), Positives = 191/467 (40%), Gaps = 23/467 (4%) Query: 294 QLTITSSSYLVFSFIVN---YMAVLATRQRAVV--RRIQRLAYVDPVVHLPNVRALNRAL 348 + + + + I +L + + +Q + D + HLPN L Sbjct: 319 ASPLYNEDHSIRGIIETSRDLTDILNSEAELNEKTQHLQFVTTHDQLTHLPNKELFFDRL 378 Query: 349 RDAPW--------SALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQL 400 A + +AL ++ + + + + G + Q Q+++ LS + + + ++ Sbjct: 379 ERATFKTHRSPFFTALLFIDLDRFKHINDSLGHEIGDQLLQEVAKRLSTSIRKTDTLARM 438 Query: 401 SGNDLALRLNTESHQERITALDS----HLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIY 456 G++ + + ++ + + F DG + + + H Sbjct: 439 GGDEFLIIIEDIKELSHVSTVAKNFIDTILP-SFTIDGHELFITPSMGISIAPTDTQHPK 497 Query: 457 LLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPI 516 LL + N + + K ++ + + L++A+ + F L QP Sbjct: 498 ELLAFAEIA--MYQAKGLGGNKCQFYTAEMNSRAKTRIELESYLRKAVNQDQFVLYYQPQ 555 Query: 517 TGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENR- 573 ++ V E LLR + +ISP+ F+P+A E G+ I WV++ + + Sbjct: 556 FDIQSGELVGCEALLRWQHPQMGMISPNDFIPLAEETGVIIEIGEWVLQEACLQNKKWQD 615 Query: 574 AKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITL 633 A R A+N+SP + F + +++ I+ L E+TES + ++ A L Sbjct: 616 AGHSPIRVAVNISPRQFREPGFLEMIERVVQTTGIKPEWLELEITESLLMDDIDSAINIL 675 Query: 634 QHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLA 693 + L+ G +AIDDFGTGY+S + LK LKID SF+R+I ++ D I ++ LA Sbjct: 676 KQLKAKGIHLAIDDFGTGYSSLSYLKRFPLSRLKIDRSFVRDITTDDNDASITKAVIALA 735 Query: 694 RMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEI 740 + VVAE +E +E + G + QGYL P + Sbjct: 736 HSMNLKVVAEGIETQEQLLFLKEKGCEVGQGYLYSPPVAKEPFDHFF 782 >UniRef50_B1XZW3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=7 Tax=cellular organisms RepID=B1XZW3_LEPCP Length = 1069 Score = 669 bits (1726), Expect = 0.0, Method: Composition-based stats. Identities = 121/580 (20%), Positives = 216/580 (37%), Gaps = 31/580 (5%) Query: 188 RVVRNPFYLRSYYSQLKQQVDAKVTKKEFALWLLALGALLLLLC-----MPLNEKSTIFS 242 R+V + + E + + + + + + S Sbjct: 473 RIVFQGRDAVLTTLAPINHLKQLEQRLELWAKVFETSSEGIFIVDAQQRILTANWALTRS 532 Query: 243 TNYTLSLLL---PLMMWGAMRYGYKLISLL----WAVVLMISIHSYQNYIPIYPGYTTQL 295 T + L L+ P + SL+ + + YP + Sbjct: 533 TGHDLIELMGGDPAELLAGADARQTWQSLVERVQTRGSWQGEVRICRRAGGDYPAWLLAN 592 Query: 296 TITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRA--------LNRA 347 + + V ++ + + T ++ RRI+ LA D + LPN L +A Sbjct: 593 AVRDRAGHVSHWVCTSIDI--TDRKESERRIRFLAEHDVLTELPNRALCIERLRLALQQA 650 Query: 348 LRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLAL 407 R A+ ++ + + + + G + + ++ L + G+ V +L G++ + Sbjct: 651 RRTGQKVAVLFIDLDRFKNINDSLGHHVGDGLLRSVAQRLVDGVRAGDTVSRLGGDEFVV 710 Query: 408 RLNTESHQERITAL-DSHLKQ---FRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELN 463 LN + E + + + L G + V I L+ + + Sbjct: 711 VLNGLADIEEVAHVVEQRLIPRVRQPHGVQGAEIHVSCSVGISVFPDDAQDIDELMRQAD 770 Query: 464 TVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD- 522 + N + + + + ++ + N L+ A+ L QP + Sbjct: 771 VA--MYQAKAQGRNGAQFFTAEMNQRAQARLMVENHLRSAVAQGQLSLHYQPRIHVADGR 828 Query: 523 -VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENR-AKMPAHR 580 E LLR + PD F+PVA E GL I WVIE + R + Sbjct: 829 VAGVEGLLRWHSPELGHVPPDRFIPVAEETGLIIEIGAWVIEAACAQIERWRGQGLQEVA 888 Query: 581 FAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELG 640 +INLS + + L ++ + QL E+TES + V +TL L+ELG Sbjct: 889 VSINLSALQLRDPGLLDVLRASLERHAVPPGQLELELTESILMDQVDAHLVTLHALRELG 948 Query: 641 CQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLV 700 +++IDDFGTGY+S L D LKID SF+R+++ + D I+ +I L + V Sbjct: 949 LRLSIDDFGTGYSSLNYLTRFPIDQLKIDRSFVRDMLDDPRDLAIIKAIIGLGHTLGLKV 1008 Query: 701 VAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEI 740 VAE VE E +A+ + G D +QGY +P + Sbjct: 1009 VAEGVERELEVQALRAAGCDELQGYHFARPMAADTATAWL 1048 >UniRef50_Q39SC6 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Geobacter metallireducens GS-15 RepID=Q39SC6_GEOMG Length = 821 Score = 669 bits (1726), Expect = 0.0, Method: Composition-based stats. Identities = 112/473 (23%), Positives = 194/473 (41%), Gaps = 19/473 (4%) Query: 284 YIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRA 343 + + + FI + T ++ +I+RLAY D + LPN Sbjct: 342 DGEPSGLRLSAFPVFNEQGKATKFIKVVEDI--TDRKRAEEKIRRLAYYDSLTGLPNRPL 399 Query: 344 LNRAL--------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGE 395 + L R AL +L + + + + G + + Q+++ LS + Sbjct: 400 MMDRLSQAIRHARRHGEVVALLFLDLDRFKDVNDSQGHRVGDRLLQEVAARLSGCTRESD 459 Query: 396 DVYQLSGNDLALRLNTESHQERITALDSHLKQF---RFFWDGMPMQPQIGVSYCYVRSPV 452 + +L G++ + + L + F D + + S Sbjct: 460 TLARLGGDEFVIIAPGVRAATDASLLADKILAALAEPFTLDRQTLHIATSIGIVLFPSDG 519 Query: 453 NHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLM 512 + +LL + + + N R + + ++ + ++QAL + FFLM Sbjct: 520 GNGEMLLQRADMA--MYAAKDRGGNSYRFFSAEMNTRAVERHELEEDMRQALTNGEFFLM 577 Query: 513 AQPITGMRG--DVYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMA 570 QP V E L+R +I P F+PVA E G S + WV+E + A Sbjct: 578 YQPQVNTGTWKVVGVEALVRWNHPRKGVILPSRFIPVAEETGFISKLGRWVLEEACRQGA 637 Query: 571 ENR-AKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQA 629 + + +P + +NL VS +L K + + L E+TE+ + + + A Sbjct: 638 QWQHDGLPPLQMGVNLCARQFTHEEIVGTVSDVLQKTGLPSELLEIELTETMLM-DSETA 696 Query: 630 QITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASI 689 TL L+ LG ++AIDDFGTGY+S+ LK+ D +KID SFIR+I + + I+ +I Sbjct: 697 VSTLGQLKALGVRLAIDDFGTGYSSFNYLKHFPLDRIKIDQSFIRDIGQSRGNGAIIEAI 756 Query: 690 CHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEP 742 +AR V+AE VE EE ++S+ +QG+ +P D I Sbjct: 757 VAVARSLGPEVLAEGVETEEQLRYLMSITCADIQGFYFSRPLLPDDVSRLIRE 809 >UniRef50_Q1H3Y9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H3Y9_METFK Length = 858 Score = 669 bits (1726), Expect = 0.0, Method: Composition-based stats. Identities = 123/586 (20%), Positives = 241/586 (41%), Gaps = 26/586 (4%) Query: 182 LCYFIIRVVRNPFYLRSYYSQLKQQVDAKVTKKEFALWLLALGALLLLLCMP-----LNE 236 + + + + L + + QQ+ + + A + A + +L+ P Sbjct: 272 VFWVGVSLALALATLAYVWLRTIQQLRRRDARMRLATSVFASSSEGILIANPNDEVIGIN 331 Query: 237 KSTIFSTNYTLSLLL--PLMMWG-----AMRYGYKLISLLWAVVLMISIHSYQNYIPIYP 289 + T Y++ LL P+ A S+ V +P Sbjct: 332 PAVTALTGYSVQELLGRPVSFLAPEQTVAESRRQASFSISEKGVWQGEALIKHKQGYTFP 391 Query: 290 GYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRAL----N 345 T T+T V +I + + + ++A RI LA+ D + LPN +L Sbjct: 392 VALTITTVTGEDGRVECYINTFSDI--SERKANEARIHDLAHTDTLTGLPNRMSLYSGLE 449 Query: 346 RALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDL 405 L + + L + +++ G + Q +++ L + V +L G++ Sbjct: 450 ERLANVQPIGVMILDLDNFKIINDTLGHHVGDQLLVEVARRLVCCVGEQGMVARLGGDEF 509 Query: 406 ALRLNTESHQERITALDSHLKQ---FRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGEL 462 + L+ + + + + Q + +G + + + Y LL + Sbjct: 510 VIVLDCPQATQIVGRVAKEVLQRLAQPYLIEGYELHSSSSIGIGVSPHDGSDPYSLLKNI 569 Query: 463 NTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD 522 +T + ++ +N + ++ ++ +++ M N L+QA+ N F L QP + Sbjct: 570 DTA--MYAAKSSGKNNFKFFTEKMREQINERMQMENHLRQAILRNEFELHYQPQVDLGTG 627 Query: 523 --VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAEN-RAKMPAH 579 + E L+R ++ P+ F+ VA E L + WV+ + +++ R + A Sbjct: 628 RIIGMEALVRWNHPEWGMVHPEKFIRVAEECNLVIPLGEWVLCEACRQISQWSRQGLEAV 687 Query: 580 RFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQEL 639 ++N+S + + L+ +QI+ L E+TES + + +Q ++ L+ Sbjct: 688 CISVNISARQLKSRYLFTLIDNLMMTHQIKPGMLELEITESAVMDDPEQTIPRMKELKNK 747 Query: 640 GCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKML 699 G +AIDDFGTGY+S + LK + LKID SF+++I ++ D I A+ LAR + Sbjct: 748 GVALAIDDFGTGYSSLSYLKLLPLTRLKIDRSFVKDIETDPNDAAICAATIALARTLGLG 807 Query: 700 VVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIRE 745 +VAE VE E E + + G D QGY KP P + + + ++ Sbjct: 808 LVAEGVETEAQLEYLRAQGCDSAQGYYFSKPLPANNIMAFVSRHQQ 853 >UniRef50_C6ML43 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Geobacter sp. M18 RepID=C6ML43_9DELT Length = 773 Score = 668 bits (1725), Expect = 0.0, Method: Composition-based stats. Identities = 100/445 (22%), Positives = 176/445 (39%), Gaps = 16/445 (3%) Query: 309 VNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRA--------LRDAPWSALCYLR 360 + + ++ A DP+ LPN L R W A+ ++ Sbjct: 189 GILSLRIMAEHKRYEEQLAYQATHDPLTALPNRNLLADRISQALAWAQRHRRWIAVLFVD 248 Query: 361 IPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITA 420 + + + + G Q + ++ LS + + + G+ + L E Sbjct: 249 LDFFKFVNDSLGHGKGDQLLKMVAERLSERVRQVDTLAHQGGDKFVVVLTDLRGNEEADR 308 Query: 421 LDSHLKQ---FRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPEN 477 +++ F DG + + L+ + N Sbjct: 309 AVHVIREAISLPFLMDGQELVISCSIGITVYPKDGEDAQTLVKNAEVA--MYRAKEQGRN 366 Query: 478 MQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGEN 535 R L + +++M L++ALE+ F L QP + E L+R + Sbjct: 367 CFRYYTRELNERVASRMSMEKHLRKALENEEFELWYQPQADLNTGRLSGMEGLIRWRNAE 426 Query: 536 DELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENR-AKMPAHRFAINLSPTSVCQAR 594 ++ P SF+P+A E GL I WV+ + A + A+NLSP Sbjct: 427 LGMVQPGSFIPLAEETGLIVQIGEWVVRTACLQNRRWQDAGLSPLTVAVNLSPRQFRDRE 486 Query: 595 FPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYAS 654 ++ +L + ++ L E+ ES + +V+ A L L+ LG ++++DDFGTGY+S Sbjct: 487 LTGVIAGVLRETGLDPRYLGLEIVESMVMHDVESAAAMLNELKALGVKLSMDDFGTGYSS 546 Query: 655 YARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAV 714 + LK LKID SF+R+I+++ I SI +A + VVAE VE E E + Sbjct: 547 LSYLKRFPFAKLKIDLSFVRDIMTDPGSAAIAKSIISMAHNLNLSVVAEGVETEGQLEFL 606 Query: 715 LSLGIDYMQGYLIGKPQPLIDTLNE 739 + G + +QGY + +P P + Sbjct: 607 RAHGCNEIQGYYLSRPLPAAEFEGM 631 >UniRef50_C4ZM39 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4ZM39_THASP Length = 920 Score = 668 bits (1725), Expect = 0.0, Method: Composition-based stats. Identities = 124/549 (22%), Positives = 213/549 (38%), Gaps = 33/549 (6%) Query: 222 ALGALLLLLCMPLNEKSTIFSTNYTLSLLLP--LMMWGAMRYGYKLISLLWAVVLMISIH 279 ++ C+ ++ T Y +L + +WA +L + Sbjct: 374 SIVITDTAGCILYVNEAFQRITGYARDEVLGRNPRILNGGLTPRATYEQMWATLLAGEVW 433 Query: 280 -----SYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDP 334 + + Y T I + V ++ + T+++ + RLAY D Sbjct: 434 RGEFHNVRKDGSAYLELATIAPIKDAGGTVTHYVAVKEDI--TQRKQSEALLHRLAYFDA 491 Query: 335 VVHLPNVRALNRALRDAPWSAL--------CYLRIPGMEMLVKNYGIMLRIQYKQKLSHW 386 + LPN L+ + A S + + I L G + +++ Sbjct: 492 LTGLPNRALLHDRIAQAIRSGVRRESFGMLMLVDIDRFRQLNDTLGHAAGDRLLCEVAAR 551 Query: 387 LSPLLEPGEDVYQLSGNDLALRLNTESHQER-----ITALDSHLK---QFRFFWDGMP-- 436 L + + V + +D A+ + E + L+ Q + G Sbjct: 552 LRASVREEDTVARHGDDDFAVLVERIGETEADALSHAEHVARKLQRALQQPYVLGGTEGD 611 Query: 437 -MQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVA 495 + V+ + LL + L ++ R +Q + Sbjct: 612 RHFATLSFGISLFHDGVSSLESLLKQAEVA--LYRAKQDGRDIVRFFNPEMQAVVDAHAR 669 Query: 496 MMNRLQQALEHNHFFLMAQPITGMRGDV-YHEILLRMKGENDELISPDSFLPVAHEFGLS 554 + R+ +ALE N F L QP RG V E LLR + ++SP F+P+A + G Sbjct: 670 LEARMHEALEANAFRLFFQPQVNRRGVVIGAEALLRWPLDGGAMVSPAEFIPLAEDTGHI 729 Query: 555 SSIDMWVIEHTLQFMAENR--AKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQ 612 + +WV+ +A + + A+N+S Q F V + I+ + Sbjct: 730 VRLGLWVLRSACAQLARWQMNEGTRHLKIAVNVSARQFHQPDFVASVKDSVRAAAIDPCR 789 Query: 613 LIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSF 672 L E+TES L++V + + L+ LG + A+DDFGTGY+S + LK + D LKID SF Sbjct: 790 LELELTESAILSDVDETIRRMNELRALGIRFALDDFGTGYSSLSYLKRLPFDQLKIDQSF 849 Query: 673 IRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQP 732 +R++ + IV +I L+ + VVAE VE E R+ + G D QGYL GKP P Sbjct: 850 VRDMAEDESSEAIVLAILSLSHALGLEVVAEGVEMPEQRDFLRQHGCDSFQGYLFGKPLP 909 Query: 733 LIDTLNEIE 741 + + +E Sbjct: 910 MEAWGDFLE 918 >UniRef50_Q1H2A5 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H2A5_METFK Length = 722 Score = 668 bits (1725), Expect = 0.0, Method: Composition-based stats. Identities = 112/541 (20%), Positives = 213/541 (39%), Gaps = 30/541 (5%) Query: 221 LALGALLLLLCMPLNEKSTIFSTNYTLSLLLPL--MMWGAMRYGYKLISLLWAVVLMISI 278 + + + Y L+ + + + + LW V + Sbjct: 177 AIVAVTDARGVITRVNDKFCSISQYGREELVGSTHRIVNSGHHPKEFFQHLWRTVSSGQV 236 Query: 279 HS-----YQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVD 333 + +Y +TT + + +I + T+++ + + +QR+A D Sbjct: 237 WNGEVCNRAKDGTLYWVHTTIVPFLGEDGVPVQYIAIRADI--TQRKILEQSVQRMALYD 294 Query: 334 PVVHLPNVRALNRAL--------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSH 385 + LPN R + L R A+ +L + + + +G + +++ Sbjct: 295 DLTGLPNRRLMVERLQMIREACVRSHRHGAVMFLDLDNFKEINDTHGHEQGDRLLKQVGQ 354 Query: 386 WLSPLLEPGEDVYQLSGNDLALRLNTESHQER-----ITALDSHLKQF---RFFWDGMPM 437 L + + V + G++ + L + L+ + ++ + + Sbjct: 355 RLRENIRQVDTVARAGGDEFIILLADLDEDPAKATAQAYNVAEKLRNALSTPYIFNRIVL 414 Query: 438 QPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMM 497 V L + L +N LQ E+ + +++ Sbjct: 415 HTSTSVGIVMFSDKAKPKTELFKHADMA--LYRAKAQGKNRISMFDPSLQAEVLEYASLL 472 Query: 498 NRLQQALEHNHFFLMAQPITGMRGDV-YHEILLRMKGENDELISPDSFLPVAHEFGLSSS 556 L+QAL+ + F L QP+ G V HE L+R ++ P F+PVA + GL Sbjct: 473 ADLRQALQRDEFRLYFQPVVNRDGKVIGHEALIRWIHPVRGMVLPGQFIPVAEQTGLIQE 532 Query: 557 IDMWVIEHTLQFMAEN--RAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLI 614 I WV+ + + A ++N+S F +V + + + +L Sbjct: 533 IGQWVLSMACKQLNVWSEDAVKSQWTLSVNVSAKQFRDMDFVGKVHDAIRQSGADPKRLW 592 Query: 615 FEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIR 674 E+TES T++ Q ++ LQ++G ++DDFGTGY+S + LK + D LKID SF+R Sbjct: 593 LELTESMFHTDIVQTIEKMRALQDIGVHFSMDDFGTGYSSLSVLKLLPLDQLKIDRSFVR 652 Query: 675 NIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLI 734 +++ + D IV +I LA + + VVAE +E+ E + + G QGY GKP P+ Sbjct: 653 DVIDDPNDAAIVRTILALAGILNLTVVAEGIESSEQFDFLEQHGCQAFQGYFFGKPVPMD 712 Query: 735 D 735 + Sbjct: 713 E 713 >UniRef50_Q1JXC9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXC9_DESAC Length = 888 Score = 668 bits (1725), Expect = 0.0, Method: Composition-based stats. Identities = 109/491 (22%), Positives = 198/491 (40%), Gaps = 43/491 (8%) Query: 295 LTITSSSYLVFSFIVNYM---------------------------AVLATRQRAVVRRIQ 327 I + V + + R R ++ Sbjct: 398 TPIRDHNGEVLGVLSVLSRGKIKSLERAKDVLAIMAARVSAEIEREISEQRLRDNEDHLE 457 Query: 328 RLAYVDPVVHLPNVRALNRALRDAPWSA--------LCYLRIPGMEMLVKNYGIMLRIQY 379 L Y D + LPN + L+ A A + ++ + + + + G + + Sbjct: 458 YLVYHDVLTDLPNRQLFRDRLQHAISMASLGQHQVGVLFIDLDHFKKINDSLGHEVGDRL 517 Query: 380 KQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHL---KQFRFFWDGMP 436 +++ L + + V +LSG++ A+ L+ ++ E + + + +G Sbjct: 518 LCEVARRLRLCIGGLDTVARLSGDEFAIILDQLNNIENVILIAQEVNRRLAEMMVVEGYK 577 Query: 437 MQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAM 496 + + + LL + A + + R L + +A+ Sbjct: 578 LFLTASIGISLYPGDGKDVVSLLKCAD--AAMFKAKELGRDNYRFYTAGLNERASELLAL 635 Query: 497 MNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLS 554 L+QA++ NH + QP + + E L+R + + +ISP F+P+A E GL Sbjct: 636 EGALRQAVDKNHLVVYFQPQVELASRRIIGAEALVRWQHPENGMISPVDFIPMAEETGLI 695 Query: 555 SSIDMWVIEHTLQFMAENR-AKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQL 613 SI WV+ + + + A P R ++N+S Q V ++L + + L Sbjct: 696 VSIGEWVLRQSCLQARQWQVAGYPPMRISVNMSARQFRQKDLVPMVRRILQETGLSPEYL 755 Query: 614 IFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFI 673 E+TES + +V A L L LG Q++IDDFGTGY+S A LK LKID SF+ Sbjct: 756 DLEITESILMNDVDGAVERLVELHSLGIQLSIDDFGTGYSSLAYLKKFPIQYLKIDRSFV 815 Query: 674 RNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPL 733 R+++ + D I ++ LAR + V+AE +E ++ + +L G Y QGYL +P P Sbjct: 816 RDVIIDPNDAAIATAVIDLARNMNLNVIAEGIEQQDQHQFLLDRGCGYGQGYLFSRPIPA 875 Query: 734 IDTLNEIEPIR 744 + + + Sbjct: 876 HEFEQLLVRQQ 886 >UniRef50_A1K5S9 GGDEF/EAL-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K5S9_AZOSB Length = 1090 Score = 668 bits (1725), Expect = 0.0, Method: Composition-based stats. Identities = 105/460 (22%), Positives = 187/460 (40%), Gaps = 17/460 (3%) Query: 300 SSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRA--------LNRALRDA 351 ++ V T R IQ LA+ D + LPN A L+ A R Sbjct: 635 QDGVLERIRGTVQDV--TSAREAEAHIQYLAHYDSLTGLPNRSAWMNQARSALSLAQRHQ 692 Query: 352 PWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNT 411 A+ +L + + + + G + + ++ L+ L + +L G++ L Sbjct: 693 HILAVLFLDLDNFKTVNDSLGHPVGDRLLAAVAQRLAHCLREEDSFARLGGDEFVALLPR 752 Query: 412 ESHQERITALDSHLKQF---RFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAEL 468 + E A+ + D + P + + S + LL +T + Sbjct: 753 VTRAEDAAAVARKMLDALATPVVIDDHELAPSVSIGISLFPSDGTDVDTLLKHADTA--M 810 Query: 469 SIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDV--YHE 526 N + + +++ + N L++A+E N L QP D E Sbjct: 811 YGAKEVGRNNFQFFVPEMNTRALERLLLENALRRAIERNELTLHYQPQVAATSDRPNGCE 870 Query: 527 ILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLS 586 L+R + + L+ P F+P+A + GL + WV+ + + +N+S Sbjct: 871 ALVRWQHPDFGLVPPAQFIPIAEDSGLIVPLGEWVLREACRQQVKWARSGLHLMVGVNIS 930 Query: 587 PTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAID 646 +A F V Q+LA+ ++ E+TES + L+ L +G +A+D Sbjct: 931 ALQFRRADFVDSVVQVLAETGANPERIELEITESALMDASDALSRRLRELANMGLSLALD 990 Query: 647 DFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVE 706 DFGTGY+S A LK + LKID SF++++ + D + A+ LAR + VVAE VE Sbjct: 991 DFGTGYSSLAYLKRLPIGRLKIDRSFVKDLPGDPEDAAVTAATLSLARDLGLEVVAEGVE 1050 Query: 707 NEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIRES 746 R+ +++ G +QGYL +P + ++ E+ Sbjct: 1051 TVAQRDFLVARGCHTLQGYLYSRPLDVAAFEAWMQATEEA 1090 Score = 48.1 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 27/175 (15%), Positives = 53/175 (30%), Gaps = 6/175 (3%) Query: 17 LPLFLPSLILPIFAHINTFAHISSGEVFLFYLPLALMISMMMFFSWAALPGIALGIFVRK 76 L L +L + ++ + G F+ + +S + + LP + LG + Sbjct: 6 LRFSLVALGYAVVGWLSLQLAVPPGYAVPFFPAAGIALSARIIYGPRILPAVFLGSLAVQ 65 Query: 77 YAELGFYETLSLTANFIIIIILCWGGYRVFTPRRNNVSHGDTR-LISQR--IFWQIVFPA 133 L ++ L G L + R I + + Sbjct: 66 IPALLQSSVAVPVWWGPALVPLGAVLQAGAGAWLAERLIGFPNPLDAPRPIIRFLLGVAP 125 Query: 134 TLFLILFQFAAFVGLLASRENLVGVMPFNLGTLINYQALLVGNLIGVPLCYFIIR 188 L+ FA V + A + G FN + +G ++ PL + + Sbjct: 126 LSCLVSPTFAIPVLMGAGVISF-GDATFNWWN--WWVGDTLGVVVATPLMFAFLG 177 >UniRef50_Q0A572 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Gammaproteobacteria RepID=Q0A572_ALHEH Length = 840 Score = 668 bits (1725), Expect = 0.0, Method: Composition-based stats. Identities = 113/536 (21%), Positives = 207/536 (38%), Gaps = 28/536 (5%) Query: 232 MPLNEKSTIFSTNYTLSLLLP--LMMWGAMRYGYKLISLLWAVV-----LMISIHSYQNY 284 + + T Y+L + + + R+ +W + I + + Sbjct: 302 IEFVNPAFTHLTGYSLEEVAGRTPAVLSSGRHPPSFYREMWQALQEQGYWRGEIWNRRKS 361 Query: 285 IPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRAL 344 +Y T IT+ + + + T R R+I++LAY DP+ LPN R L Sbjct: 362 GALYLELLTITAITNDDGDTTHYAGLFTDI--THIRENERQIRQLAYYDPLTRLPNRRLL 419 Query: 345 NRAL--------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGED 396 + L R A+ ++ + + + G + + ++S L L + Sbjct: 420 DDRLSLAIKHAHRHRQRLAVMFIDLDHFKQVNDTLGHAVGDELLLRVSERLREHLREDDT 479 Query: 397 VYQLSGNDLALRLNTESHQERITALDSHLKQF---RFFWDGMPMQPQIGVSYCYVRSPVN 453 + +L G++ L + + L + + + + Sbjct: 480 LARLGGDEFLALLPDLQEVDEAIRVTQRLIEAISQPYTIGDHDFRVGCSIGLSLYPDDGE 539 Query: 454 HIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNH-FFLM 512 L+ + + N R A + K+++A+ L+ E + Sbjct: 540 SPDALIRNADGA--MYRSKTEGRNTYRLYAPEMDTRAKNQLALETALRDTAETGEGLSIH 597 Query: 513 AQPITGMRGDV--YHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMA 570 QPI R E LLR ++P F+P+A GL + V+ + Sbjct: 598 YQPIFDWRTGALHSAEALLRWHHPTRGAVAPGEFIPLAERSGLIIPLGQAVMRMVCTQLK 657 Query: 571 ENRA-KMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQA 629 +A + AINLS Q P + ++L + + + FE+TES + ++++ Sbjct: 658 RWQAAGLRPVPVAINLSAKQFWQDELPGFIRKMLQRCDLNPGLMGFELTESTLMHDIERG 717 Query: 630 QITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVS-NSLDYQIVAS 688 TL L+ +GC +AIDDFGTGY+S L+ + LKID SF+ ++ + IVA+ Sbjct: 718 LDTLAALRGMGCSVAIDDFGTGYSSLTYLQRLPVTTLKIDRSFVSDLGTCRKGGCAIVAA 777 Query: 689 ICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDT-LNEIEPI 743 + LAR ++ VVAE VE E A+ + +QG+ G+P P + + Sbjct: 778 VTGLARELELQVVAEGVETEAQLRALDRYQVALVQGFKTGRPVPADAFSEAYLRAM 833 >UniRef50_C6CDP3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dickeya dadantii Ech703 RepID=C6CDP3_DICDC Length = 685 Score = 668 bits (1724), Expect = 0.0, Method: Composition-based stats. Identities = 115/535 (21%), Positives = 207/535 (38%), Gaps = 29/535 (5%) Query: 232 MPLNEKSTIFSTNYTLSLLLPL--MMWGAMRYGYKLISLLWA-----VVLMISIHSYQNY 284 + + T Y + M+ + R+ + +W + + + Sbjct: 153 IISVNPAFSRLTGYHFDDVNGKNPRMFKSSRHPPSFYAEMWHALHEKGLWIGEVWDRHKN 212 Query: 285 IPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRAL 344 Y T I ++ + + + + + T ++ I R A D + LPN Sbjct: 213 GHDYLKELTVTVIRDAAGHIINHVGMFSDI--TLRKKQEELIWRQANYDAITDLPNRHLF 270 Query: 345 N--------RALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGED 396 A R AL + + + + + G ++S L ++ + Sbjct: 271 QSKLEQAAQHARRTGNLMALMLIDLDHFKAVNDSMGHRAGDMLLTRVSQRLIDSVQHADT 330 Query: 397 V-YQLSGNDLALRLNTESHQERITALDSHLKQ---FRFFWDGMPMQPQIGVSYCYVRSPV 452 + +L G++ A+ ++ AL L + F DG M + + Sbjct: 331 IIARLGGDEFAVIISDLFQPHDCDALAKALLENLSHPFNIDGENMFVSASIGIACFPTDS 390 Query: 453 NHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLM 512 +++ L + + NA N + L + ++ M N L++A+ F + Sbjct: 391 DNLEALFKNADQA--MYAAKNAGRNGFSYYSPALHDAARTRLRMTNDLRKAIREEQFEVY 448 Query: 513 AQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMA 570 QPI + E L+R L+SP F+P+A E G+ + WV + +A Sbjct: 449 YQPIVALDTGHITKAEALVRWHHPTHGLVSPAEFIPLAEETGIIIPLGNWVARQAIAQLA 508 Query: 571 ENRAKM-PAHRFAINLSPTSVCQARFPVE-VSQLLAKYQIEAWQLIFEVTESNALTNVKQ 628 R P + INLSP + F + L ++ + + E+TE L + Sbjct: 509 RWRQFCDPRFQMTINLSPIQLRSQDFADMDWLRELDRHGLSGDAIAIEITEGLLLNAEPR 568 Query: 629 AQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVAS 688 L ++ G QIAIDDFGTGY+S A L+ N D LKID SFI ++ + + +++ + Sbjct: 569 VNRNLHMFRDAGIQIAIDDFGTGYSSLAYLRRFNIDYLKIDRSFIEDM--DGVGHELCVA 626 Query: 689 ICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPI 743 I +A + VVAE VE + + +G DY QG+L +PQ D + Sbjct: 627 IVAMAHSLGLQVVAEGVETLQQSAMLKRIGCDYAQGFLFSRPQSAADITQLLPTA 681 >UniRef50_C1DCZ4 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DCZ4_LARHH Length = 759 Score = 667 bits (1723), Expect = 0.0, Method: Composition-based stats. Identities = 119/530 (22%), Positives = 208/530 (39%), Gaps = 24/530 (4%) Query: 231 CMPLNEKSTIFSTNYTLSLLLP--LMMWGAMRYGYKLISLLWAVV-----LMISIHSYQN 283 + + T YT L M+ G + + + Sbjct: 223 TLITVNPAFTRITGYTEEQALGRRSRMFRTDHVGQATNMQMMQSLAEHGHWQGEMFDRHR 282 Query: 284 YIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRA 343 +YP + + + V +++ + + +R++A R+ LA DP+ L N A Sbjct: 283 DGRLYPVWLSLSAVYDED-RVSNYVGVFTDI--SRRKAAEDRLVFLASHDPLTRLLNRDA 339 Query: 344 LNRALRD------APWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDV 397 L R L D A+ ++ + +++ ++G + ++ LS ++ + Sbjct: 340 LFRKLEDICLSGIEQSFAVLFIDLDRFKLINDSFGHATGDNLLRIVAARLSFVVGSNALL 399 Query: 398 YQLSGNDLALRLNTESHQERITALDSHLKQF---RFFWDGMPMQPQIGVSYCYVRSPVNH 454 + G++ L L + + + + L + + + Sbjct: 400 ARQGGDEFTLLLEDTGQRTAVIDMANRLLDELSQPITLENQELHITASIGIALAPEHGKD 459 Query: 455 IYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQ 514 LL +T L +A +N L ++A+ N L+ AL N L Q Sbjct: 460 AATLLRHADTA--LYRAKDAGKNTFAFFTHTLHGLSNQRLALENALRHALPRNQLTLAYQ 517 Query: 515 PITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAEN 572 P V E+LLR +SP +F+P+A E GL I WV+E + +A Sbjct: 518 PQIDPHRQRLVGVEVLLRWHHPELGQVSPATFIPLAEETGLILPIGRWVLETACRQLAAW 577 Query: 573 R-AKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQI 631 A A+NLS + +L+ + A +L EVTES + N A Sbjct: 578 DTAGFSVGHVAVNLSAHQFNDPGLTHHLKAVLSDSGLAARRLELEVTESTLINNPTAAIA 637 Query: 632 TLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICH 691 + L+ELG +++IDDFGTGY+S A+LK D LKID +F+ I +++ D I +I Sbjct: 638 LMTELKELGVRLSIDDFGTGYSSLAQLKRFPLDTLKIDRTFVSGIPADASDLAITEAIIA 697 Query: 692 LARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIE 741 +A+ + VVAE VE + R+ + G + +QGY P + Sbjct: 698 MAKKLSLSVVAEGVETADQRDFLARCGSELIQGYFYSPPLAAEALHSFSR 747 >UniRef50_B7JWK6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Cyanothece RepID=B7JWK6_CYAP8 Length = 1143 Score = 667 bits (1722), Expect = 0.0, Method: Composition-based stats. Identities = 96/484 (19%), Positives = 191/484 (39%), Gaps = 23/484 (4%) Query: 277 SIHSY--QNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDP 334 +H + ++ + + T ++ ++Q A D Sbjct: 656 EVHYRIIRPDGETRWLHSRSRLVYDEQGKSLRIDGINSDI--TERKQAEEQLQYNATHDT 713 Query: 335 VVHLPNVRALNRALRDAPW---------SALCYLRIPGMEMLVKNYGIMLRIQYKQKLSH 385 + LPN L A A+ +L + +++ + G L + ++++ Sbjct: 714 LTQLPNRLLFMDRLEHALERRRRYSDPLFAVLFLDLDEFKVINDSLGHALGDELLREIAR 773 Query: 386 WLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLKQ---FRFFWDGMPMQPQIG 442 L L + + +L G++ + L + + + + F +G + Sbjct: 774 RLQKSLRADDTLARLGGDEFTILLEEIHDVKDAIKIAERIHKDLTRPFNLEGQEIFTNTS 833 Query: 443 VSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQ 502 + +L + +T + + + ++ + L++ Sbjct: 834 IGIALSNGEYEAASEILRDADTA--MYRAKAGGKACYAIFDQQMHASAVSRLQLETDLRR 891 Query: 503 ALEHNHFFLMAQPITGMR--GDVYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMW 560 A+E F + QPI ++ E L+R + L+ P F+P+A E GL I W Sbjct: 892 AIERQEFLVYYQPIISLQHDTLTGFEALIRWQHPQQGLVPPARFIPIAEETGLIVPIGEW 951 Query: 561 VIEHTLQFMAENRAKMPA---HRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEV 617 ++E Q + + + + ++NLS + A + ++L+K +I+ L E+ Sbjct: 952 ILEQAAQQLKIWQTQYRNYESLKMSVNLSSKQLRDASLLGTIDRILSKTEIDNNALKVEI 1011 Query: 618 TESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIV 677 TES + NV+ A L L+E +I +DDFGTGY+S + L + LKID SF+ + Sbjct: 1012 TESILMENVQVAADVLIALRERNIEICLDDFGTGYSSLSYLHRFPVNTLKIDRSFVMRMR 1071 Query: 678 SNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTL 737 N + +IV +I LA + M ++AE +E E + +G + QGY KP + Sbjct: 1072 PNDENSEIVRAIVSLAHILGMEIIAEGIETELQLAQLKWIGCEQGQGYFFAKPLATSEVE 1131 Query: 738 NEIE 741 ++ Sbjct: 1132 ALLK 1135 >UniRef50_Q2W7U0 Predicted signal transduction protein containing a membrane domain n=3 Tax=Magnetospirillum RepID=Q2W7U0_MAGSA Length = 831 Score = 667 bits (1722), Expect = 0.0, Method: Composition-based stats. Identities = 106/530 (20%), Positives = 201/530 (37%), Gaps = 25/530 (4%) Query: 232 MPLNEKSTIFSTNYTLSLLLP--LMMWGAMRYGYKLISLLWAVV-----LMISIHSYQNY 284 + + T Y + M + + +W + + Sbjct: 54 IIAVNPAFTAITGYAAEEAIGNDPRMLSSGFHDPAFYQEMWDQLSTTGQWQGEVVDRHKD 113 Query: 285 IPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRAL 344 + + + + V I + V T R ++ + + DP+ LPN Sbjct: 114 GRPVRLWLSITSQRGADGKVARRIAVFRDV--TEARETAEQLWQRSNFDPLTELPNRNLF 171 Query: 345 NRAL--------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGED 396 L R+ A+ ++ + G + + + G + + Q+ + L G+ Sbjct: 172 LDRLLQALVLAGREGSKVAMLFIGLDGFKNINDSLGHWIGDKVLQEAARRFQNCLRQGDT 231 Query: 397 VYQLSGNDLALRLNTESHQERITALDS---HLKQFRFFWDGMPMQPQIGVSYCYVRSPVN 453 + G++ + L+ + A+ + Q F + + + C Sbjct: 232 AARFGGDEFTVVLSGVRATAEVEAVIRSVLEVLQEPFVVEHHHILISCSIGVCMWPGDGE 291 Query: 454 HIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMA 513 + L+ A L A N R + + + + + L AL F L+ Sbjct: 292 DVDSLMRNA--TAALQQAKQAGRNTFRFFTPAMDARAQARSRLADELSGALSQGEFHLVF 349 Query: 514 QPITGMRGDV--YHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAE 571 QP+ ++ E LLR ++SPD F+P+A E GL I W++ + Sbjct: 350 QPLVDVKSGKVNAAEALLRWHNRYLGVVSPDQFVPLAEEIGLIRPIGEWLLTAACREALV 409 Query: 572 NRA-KMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQ 630 + + A+N+SP Q + + L ++ W L E+TE L+N ++ Sbjct: 410 WQGMGLGEINIAVNISPRQFQQGDIVGIIRRALEDTRLPPWLLTIEITEGLLLSNGEEIL 469 Query: 631 ITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASIC 690 ++ ++ LG +++DDFGTGY+S + LK+ D+LKID SFI ++ +S D +V +I Sbjct: 470 AKMEAIRTLGVSLSVDDFGTGYSSLSYLKSFPVDVLKIDRSFIADMGDHSDDATMVEAII 529 Query: 691 HLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEI 740 L + VVAE VE ++ + + + G D QGY P + Sbjct: 530 ALGHSLHLEVVAEGVETKQQLDFITAQGCDVAQGYYFSPPLSGPRFREFV 579 >UniRef50_D2XIQ4 Putative signal transduction protein n=1 Tax=uncultured bacterium 9F08 RepID=D2XIQ4_9BACT Length = 965 Score = 667 bits (1721), Expect = 0.0, Method: Composition-based stats. Identities = 130/708 (18%), Positives = 253/708 (35%), Gaps = 39/708 (5%) Query: 65 LPGIALGIFVRKYAELGFYETLSLTANFIIIIILCWGGYRVFTPRRNNVSHGDTRLISQR 124 + + L + + L ++ G R HG R Sbjct: 125 IAVVVLTALISQLDWLAISVASRYAIGLPGALLAGIGLLRYSRTDEPWADHGRVRAALVV 184 Query: 125 IFWQIVFPATL-FLILFQFAAFVGLLASRENLVGVMPFNLGTLINYQALLVGNLIGVPLC 183 + + L LI+ + + + + + AL G I L Sbjct: 185 VGLALAIYGLLTGLIVPPLDIPLARSLNSQWFLEQTGVPVQLFRALCALTAGAAIWYVLH 244 Query: 184 YFIIRVVRNPFYLRSYYSQLKQQVDAKVTKKEFALWLLALGALLLLLCMPLN----EKST 239 F I R + + A+ +E + L A ++ L + Sbjct: 245 TFEIG--RERQLHQMASETQQALHQARQLGQEQQMILDAAADAIIGLDNRGRVTFSNPAA 302 Query: 240 IFSTNYTLSLLLPLMMWGAMR-------YGYKLISLLWAVVLMISIHS------YQNYIP 286 Y+ L + + + + LW ++ + Sbjct: 303 TALFGYSAEELQGEDLHALIHLCKEGEAHPRE-ECGLWRLLRFGGQYHSGHETLRHKDGT 361 Query: 287 IYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNR 346 P I +V ++ + + + + + + ++R A+ D + L N L Sbjct: 362 PLPVEMNGSAIDDEKGVVIGAVLTFRDI--SERLSYEQELERRAHYDELTGLANRVLLKA 419 Query: 347 AL--------RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVY 398 L R A+ +L + +++ G + ++ L ++ + V Sbjct: 420 RLQQTTAQAHRHGKSVAVLFLDLDHFKIVNDGLGHDCGDRLLVAIAQRLQTVVREADTVA 479 Query: 399 QLSGNDLALRLNTESHQERITALDSHLKQ---FRFFWDGMPMQPQIGVSYCYVRSPVNHI 455 + G++ + L+ + E + L Q + D + V + Sbjct: 480 RHGGDEFVIVLSEPDNGEDAAEIGRRLLQRIAEPVWIDEHELYTTASVGVSLFPRDGTDV 539 Query: 456 YLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQP 515 LL + A + + N + + + L ++ M+++L+QA+E N L QP Sbjct: 540 DTLLRNAD--AAMYRAKHLGRNNLQFYSEEMNLSLSKRLRMLSQLRQAVERNELCLHYQP 597 Query: 516 ITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAEN- 572 + G + E L+R + ++SP F+P+A E GL I WV+ + Sbjct: 598 QASLPGGRLLGVEALVRWQHPELGMVSPAEFIPLAEESGLIEPIGEWVLREACRQGVAWD 657 Query: 573 RAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQIT 632 RA R ++NLS + + +L + + +L E+TE+ + N +Q+ Sbjct: 658 RAGFMPLRISVNLSARQFDNPKLDDTIRDVLEQTGLAPERLELELTETALIANPQQSVQR 717 Query: 633 LQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHL 692 L +++LG ++A+DDFGTGY+S A L+ DL+KID SF+ + + N + IV ++ + Sbjct: 718 LSAIRDLGVRLALDDFGTGYSSLAYLQRYTFDLIKIDRSFVADAIRNPGNAAIVRTVIAM 777 Query: 693 ARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEI 740 AR+ +AE E E + G D +QGY I +P P + Sbjct: 778 ARLLGSETIAEGAETAETITFLGRNGCDAVQGYYISRPLPAGEIEQLF 825 >UniRef50_Q2YAT8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2YAT8_NITMU Length = 705 Score = 666 bits (1720), Expect = 0.0, Method: Composition-based stats. Identities = 97/502 (19%), Positives = 194/502 (38%), Gaps = 29/502 (5%) Query: 255 MWGAMRYGYKLISLLWAVVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAV 314 + + R ++ W + I + T + + + + Sbjct: 217 LIKSGRRADHFETVRWGK--------GRKPIDV---SVTISAMKDRAGNIIGASKIVRDI 265 Query: 315 LATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALR--------DAPWSALCYLRIPGMEM 366 T+++ RI+ LA+ D + LPN L+ LR + AL ++ I ++ Sbjct: 266 --TQRKESQERIEYLAHYDSLTGLPNRTLLSDRLRIAIENARRYSIRLALLFVDIDRFKL 323 Query: 367 LVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLK 426 + + G + + + ++ + + + V ++ G++ + L+ L Sbjct: 324 VNDSLGHEIGDKLLKAVAQRMQSTVRQADTVSRVGGDEFVVLLSRIETATDAARSAEKLI 383 Query: 427 ---QFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGA 483 + + + + L + A + N + + Sbjct: 384 TSISQPYQIEEHELLLTASIGISIYPDNGKDASSLTRNAD--AAMYSAKGQGRNRYQFYS 441 Query: 484 MYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISP 541 L +++ + + L+ AL + F + QP + + E L+R LISP Sbjct: 442 EDLTYAAAERLRLEHDLRGALSRDEIFPLYQPQIELATGRVIGVEALMRWNRAGQGLISP 501 Query: 542 DSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRA-KMPAHRFAINLSPTSVCQARFPVEVS 600 SF+PVA + GL ++ +++ + + A+N+S Q F V Sbjct: 502 ASFIPVAEDSGLILALGEYILRKACLQARQWHEHQGFQGTIAVNVSAVQFRQNDFTDVVL 561 Query: 601 QLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKN 660 ++L++ L EVTES + ++ + L+ G ++AIDDFGTGY+S + L+ Sbjct: 562 RVLSETGFPPECLELEVTESVVMQGLESVVQKMGILESHGIKLAIDDFGTGYSSLSYLRQ 621 Query: 661 VNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGID 720 D LKID SF+R++ ++ I+ +I + R + V+AE VE E + + Sbjct: 622 FAIDRLKIDQSFVRDLPGDADAQAIIRAIVAMGRSLGLRVMAEGVETEAQARFLQDIECT 681 Query: 721 YMQGYLIGKPQPLIDTLNEIEP 742 QGYL +P D ++ Sbjct: 682 ESQGYLYARPMKSNDFEAWLKT 703 >UniRef50_B9MBY4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Diaphorobacter sp. TPSY RepID=B9MBY4_DIAST Length = 790 Score = 666 bits (1720), Expect = 0.0, Method: Composition-based stats. Identities = 127/578 (21%), Positives = 233/578 (40%), Gaps = 34/578 (5%) Query: 200 YSQLKQQVDAKVTKKEFALWLLALGALLLLLCMPLNEKSTIFSTNYTLSLLLP------- 252 ++ DA+ ++ + + + + I S N ++ L+ Sbjct: 216 LREVHAARDAQALSEQRWRLAATVVDNTIEGVVVTDADGRILSVNPAVTRLMGYTEEELL 275 Query: 253 ---LMMWGAMRYGYKLISLLWAVV-----LMISIHSYQNYIPIYPGYTTQLTITSSSYLV 304 ++ + R+G +W + I + + ++P + + + V Sbjct: 276 GQNPRVFKSGRHGPAFYEAMWDTMRQTGHWQGEIWNRRKNGEVFPERMSLSAVRGADGAV 335 Query: 305 FSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRAL--------NRALRDAPWSAL 356 ++ + + + ++A +R++ LA+ DP+ LPN +A AL Sbjct: 336 THYVCMFTDI--SEEKAQHQRLEFLAHCDPLTGLPNRAWFGEQLDSAVRQAQDSGEQMAL 393 Query: 357 CYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQE 416 L + + + +YG + + + ++ + L PG+ + +L+G+++A+ H + Sbjct: 394 LLLNLDRFKDVNDSYGHAVGDEVLRHITRQVEQSLRPGDLLGRLAGDEIAVLARHLRHAD 453 Query: 417 RITALDSHLKQFR----FFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVT 472 A+ HL DG+ + + V C + LL + + Sbjct: 454 GAAAVARHLIAAASTPWCTPDGIQVVVGVSVGICMFPAHARTTEALLQGA--HSSVYGAK 511 Query: 473 NAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLR 530 L + ++++ + RL+ AL H L QP + + E L+R Sbjct: 512 ARGRGAYCFFDESLIQAARERLEIEARLRVALAQGHLRLYYQPQVCIVTGRIMGAEALVR 571 Query: 531 MKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRA-KMPAHRFAINLSPTS 589 + +ISP F+PVA G+ + WV+ + RA +P R AINLSP Sbjct: 572 WLDPQEGMISPARFIPVAETSGVIGPLGQWVMRAACEQGQRWRADGLPEIRLAINLSPRQ 631 Query: 590 VCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFG 649 ++ L A L E+TES + + LQ LQ+LG ++A+DDFG Sbjct: 632 FQLTDVAACAAEALKASGFPARCLELELTESVLAERPDEIRAVLQRLQQLGVRMAVDDFG 691 Query: 650 TGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEE 709 TGY+S A LK D+LKID FIR+I ++ D I A+I + + V+AE VE + Sbjct: 692 TGYSSLAHLKRFPIDVLKIDQGFIRDIPRSADDMAISAAIVAMGHSLGLSVLAEGVETPQ 751 Query: 710 IREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIRESA 747 + G D QGYL +P P + ++ A Sbjct: 752 QLAFLRERGCDAYQGYLCSRPLPAEEFARLLQAHNGMA 789 >UniRef50_Q3A6S1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A6S1_PELCD Length = 947 Score = 665 bits (1718), Expect = 0.0, Method: Composition-based stats. Identities = 135/628 (21%), Positives = 236/628 (37%), Gaps = 32/628 (5%) Query: 139 LFQFAAFVGLLASRENLVGVMPFNLGTLINYQALLVGNLIGVPLC--YFIIRVVRNPFYL 196 + +F L +VG P + ++ + G+ L +F+ R+ Sbjct: 315 MQRFGLASVDLPPGSTIVGRPP-SFWMRHRLLITVLSGMAGLQLLAGWFLWRLSGTRRGT 373 Query: 197 RSYYSQLKQQVDAKVTKKEFALWLLALGALLLLLCMPLNEKSTIFSTNYTLSLLLPLMMW 256 + Y + + Q + A+ ++ L+ L P E+ +S+ L L ++M Sbjct: 374 QKYLHEKEAQFKTVIRATHDAVVVINERGLVTLF-NPAAEELFGWSSAEMLGCNLDILMP 432 Query: 257 ----GAMRYG-YKLISLLWAVVLMI---SIHSYQNYIPIYPGYTTQLTITSSSYLVFSFI 308 R+ S + + + +P + + Sbjct: 433 EGYRDQHRHDVASFFSTGEPSEAVGRSLELLAVHRSGKEFPIELSLSV--GKYGHERFVL 490 Query: 309 VNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRD--------APWSALCYLR 360 + + QR V R I++LAY D + LPN R +AL ++ Sbjct: 491 AILRDI--SSQRQVEREIKQLAYYDSLTGLPNRALFEDRFRRVLTTADRAGKMAALLFIG 548 Query: 361 IPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITA 420 + + + +G + + + L + + G V + G+ + L S E Sbjct: 549 VDNLNSINDTHGHTYGDKLLKVIGQRLVAVAQNGATVVRWEGDKFVVLLPGLSDAETADT 608 Query: 421 LDSHLKQ---FRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPEN 477 + + Q D + LL + + N Sbjct: 609 VARQILQSIAEPCEVDDQSFFVTASIGGAVYPQHGADGDKLLKNADMA--MYASKELGRN 666 Query: 478 MQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGEN 535 + R + ++ + + L+ AL FFL QP + E LLR + Sbjct: 667 TYCTFTEEMNRRVLERSGLEHNLRLALAREEFFLAYQPQVDQATGKVLGSEALLRWRHAE 726 Query: 536 DELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENR-AKMPAHRFAINLSPTSVCQAR 594 +ISP F+P+A E GL I WV++ + A P R A+NLS Q Sbjct: 727 KGMISPGQFIPLAEESGLILPIGHWVLQTACAQNKAWQLAGYPPMRIAVNLSARQFQQPD 786 Query: 595 FPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYAS 654 F +V+Q+L +++ L E+TES + + A TL+ L++LG IAIDDFGTGY+S Sbjct: 787 FFDQVAQVLKDTELDPRYLELELTESLLMADADVAVETLRALRDLGVGIAIDDFGTGYSS 846 Query: 655 YARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAV 714 + LK D +KI F+ +I + D IV ++ +A + +VAE VE E E + Sbjct: 847 LSYLKTFPIDRIKIAQEFVLDITRDPGDAAIVETVIAMAHGLGLDIVAEGVETEAQLEFL 906 Query: 715 LSLGIDYMQGYLIGKPQPLIDTLNEIEP 742 + MQGY G+P P + + + Sbjct: 907 RARRCQVMQGYYFGRPMPAENFIEYLSE 934 >UniRef50_A9D5G8 Sensory box protein n=1 Tax=Shewanella benthica KT99 RepID=A9D5G8_9GAMM Length = 1066 Score = 665 bits (1718), Expect = 0.0, Method: Composition-based stats. Identities = 116/538 (21%), Positives = 222/538 (41%), Gaps = 27/538 (5%) Query: 232 MPLNEKSTIFSTNYTLS--LLLPLMMWGAMRYGYKLISLLWAVV-----LMISIHSYQNY 284 + L + T Y+L + + + +W + I + + Sbjct: 529 IELVNPAFTQITGYSLEDVKGRSPSVLNSQQQTRHFYDEMWQSLQTEGKWQGEIWNKRKN 588 Query: 285 IPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRA- 343 +YP Y + + + I ++ + + ++ + I + D + LPN Sbjct: 589 GQVYPEYLAITVVKDDAGQIIQHIGLFLDI--SNRKQYEQNIWYKTHYDLLTKLPNRSLY 646 Query: 344 -------LNRALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGED 396 + A + A+ ++ + + YG + + ++++ L L+ + Sbjct: 647 TIKVQQEMTMAQENNRQVAILFINLDRFKYTNDIYGHEVGNKLLRQVASRLKSLVNKHDF 706 Query: 397 VYQLSGNDLALRLNTESHQERITALDSHLKQF---RFFWDGMPMQPQIGVSYCYVRSPVN 453 V +L G++ + L Q ++ A+ + F DG + + + Sbjct: 707 VARLGGDEFIIILPRIRRQHQVQAIADKVNARLASPFGVDGDDLMISASIGISLFPENGS 766 Query: 454 HIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMA 513 LL T + N N R + + + +++ + RL+QA+ F L Sbjct: 767 SEELLTRNAETA--MYQAKNDGRNNYRYYSSEMNEHILERIQLEQRLRQAVIRQEFCLHY 824 Query: 514 QPITGM--RGDVYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAE 571 QPI + R E L+R + +I+PD F+P+A E GL I WV++ L +A Sbjct: 825 QPIVNLDDRTITGVEALIRWQDPKFGMIAPDMFIPIAEETGLIEPIGEWVLQQALTDLAH 884 Query: 572 NRAKMPAHRFAINLSPTSV---CQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQ 628 AIN+S + + F + LL K IE L E+TES + + +Q Sbjct: 885 WHRLGFKISMAINVSGRQLLGQNKTSFKCLLKALLKKNDIEPQYLHIEITESMLMDDTEQ 944 Query: 629 AQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVAS 688 L+ ++ LG I IDDFGTGY+S + LK ++KID SFI N++ + D +++ + Sbjct: 945 CMTVLESIRSLGLDIYIDDFGTGYSSLSYLKRFPIAVIKIDKSFIDNMLESESDAKLIKA 1004 Query: 689 ICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIRES 746 I + + ++ +VAE +E + + +LG D+ QGYL P P + + + ++ Sbjct: 1005 IVMMGQSLELKLVAEGIETHAQWQMLQALGCDFGQGYLFSHPLPAQELASFLHQQAQA 1062 >UniRef50_Q0F2A0 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F2A0_9PROT Length = 644 Score = 665 bits (1718), Expect = 0.0, Method: Composition-based stats. Identities = 110/476 (23%), Positives = 195/476 (40%), Gaps = 21/476 (4%) Query: 282 QNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNV 341 +P + + F F + + ++++A +++ LA D + L N Sbjct: 169 HRDGHEFPAEMSISP--QAVGASFIFNIFVRDI--SQRKADEEKLETLATRDELTGLINR 224 Query: 342 ----RALNR----ALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEP 393 L + A R A+ +L + G + + + G + Q ++ ++ LS + Sbjct: 225 FSYNHLLKKEVALAKRHMESLAVLFLDLDGFKNINDSLGHDVGDQLLRETANRLSACIRE 284 Query: 394 GEDVYQLSGNDLALRLNTESHQERITALDSHLKQF---RFFWDGMPMQPQIGVSYCYVRS 450 + V ++ G++ + + L + + + Sbjct: 285 SDTVARIGGDEFLIIMPGIKDVHDPRFLCERILNMIGQPYLIGTQECFVGASIGISLYPL 344 Query: 451 PVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFF 510 +++ L+ +T + ++ N + + E ++ M L+ A+E N F Sbjct: 345 DGDNVESLVKNADTA--MYQAKDSGRNAYKFFTPAMGEEAFKRMEMERALRYAIEKNQFK 402 Query: 511 LMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQF 568 L+ QP + + E LLR ISP F+ + L I WV++ + Sbjct: 403 LLYQPQVELSSGRILGVEALLRWTHPEWGPISPSVFISLIENTNLILPIGEWVLDEACKQ 462 Query: 569 MAENRAKMP--AHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNV 626 +A P R A+N + QA V++ L K + A L E+TE +A+ ++ Sbjct: 463 NKAWQALHPGFPLRMAVNFAARQFAQADLVETVAKALQKSGLAAEFLELEITEGSAMNDI 522 Query: 627 KQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIV 686 + +Q L+ELG IAIDDFGTG++S A LK D+LKID SF+ I D IV Sbjct: 523 ELNIRKMQALKELGVSIAIDDFGTGFSSLAYLKRFPIDILKIDKSFLDEIQHGKKDAAIV 582 Query: 687 ASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEP 742 A+I +A M V+AE VE + E + G D +QGYL +P P ++ Sbjct: 583 ATISEMAHSLGMEVIAEGVETKYQLEFLRGHGCDMIQGYLFSRPVPPEQIAEILQK 638 >UniRef50_Q2BMA7 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMA7_9GAMM Length = 932 Score = 665 bits (1717), Expect = 0.0, Method: Composition-based stats. Identities = 110/443 (24%), Positives = 194/443 (43%), Gaps = 20/443 (4%) Query: 314 VLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALR--------DAPWSALCYLRIPGME 365 V ++ R++ +A D + LPN L L A+ ++ + + Sbjct: 488 VEINERKMAEERVKHMALHDALTGLPNRLLLEERLENALSDAKSHQWQLAVLFIDLDRFK 547 Query: 366 MLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHL 425 ++ G Q ++++ L ++ + V +L G++ + LN + I + + Sbjct: 548 LVNDTLGHHEGDQLLVEVANRLHQVIGANDTVARLGGDEFVIVLNEIAGSTEINGVIEDI 607 Query: 426 KQ-----FRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQR 480 +Q + M + P + L+ + A + + N + Sbjct: 608 QQNFKPAVKLALQDMFVTP--SIGVAIYPEDGETPVQLMKNAD--AAMYHAKASGRNCAQ 663 Query: 481 RGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDEL 538 L LK+++++ N L QAL+ F L QP ++ + + E L+R + Sbjct: 664 YFNRSLDDSLKERISLENALNQALKLGQFELYYQPQLDVKSNRIIGAEALIRWNHPEKGM 723 Query: 539 ISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENR-AKMPAHRFAINLSPTSVCQARFPV 597 ISPD+F+P+A E GL I WV+ +A+ R ++NLS V + F Sbjct: 724 ISPDAFIPLAEESGLIVDIGSWVLHQASSQLAQWRKQGFDQLSVSVNLSALQVQKESFAR 783 Query: 598 EVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYAR 657 EV+ ++ +Y + L E+TES + N ++ L + LG QI++DDFGTGY+S + Sbjct: 784 EVADVIREYGVPEACLDLELTESMIMRNAEETIAALDKIHNLGIQISVDDFGTGYSSLSY 843 Query: 658 LKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSL 717 LK D LKID SF+++I ++ D I +I +A + V+AE VE E + Sbjct: 844 LKRFPLDKLKIDRSFVQDITVDTDDAMICKTIISMAHNLNLQVIAEGVETNAQLELLRDY 903 Query: 718 GIDYMQGYLIGKPQPLIDTLNEI 740 G + QGYL KP P+ + Sbjct: 904 GCEQYQGYLFAKPLPVEQMTEHL 926 >UniRef50_B8GM77 Putative uncharacterized protein n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GM77_THISH Length = 759 Score = 665 bits (1716), Expect = 0.0, Method: Composition-based stats. Identities = 110/519 (21%), Positives = 207/519 (39%), Gaps = 25/519 (4%) Query: 242 STNYTLSLLLP--LMMWGAMRYGYKLISLLWAVV-----LMISIHSYQNYIPIYPGYTTQ 294 T Y+ LL M + + + + + I + P T Sbjct: 222 ITGYSDGELLGRTPRMLKSGHHDAAFYADISKTLEVRGHWRGEILDRTRDGRVIPLLQTI 281 Query: 295 LTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL------ 348 + + V +I + + + R+ LA+ DP+ LPN L Sbjct: 282 SVVRDTQGAVSHYITIVTDI--SSIKETQSRLDFLAHHDPLTELPNRLLFTARLEHAIDW 339 Query: 349 --RDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLA 406 R+ L ++ + + + + G L + +++ L L+ + + +L G++ Sbjct: 340 AVRNQAHFGLLFIDLDRFKTINDSLGHQLGDRLLVQVARRLRGLVRKSDTIARLGGDEFV 399 Query: 407 LRLNTESHQERITALDSHLK---QFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELN 463 + + + L L + FF + + + LL + Sbjct: 400 VLVEGIHNAGEAELLAEKLVHAMRQPFFLEETELHIGCSIGITLYPEDGEDPVTLLKNAD 459 Query: 464 TVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD- 522 A + V + + + + L + +++A+ L+QAL N + QP+ + Sbjct: 460 --AAMYRVKDFGRDGFCKFSQDLAEAVDERLALETALRQALRENQLQVHYQPVIDLAQGR 517 Query: 523 -VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAH-R 580 V E L R + I+P SF+ +A E L + W+ + R + Sbjct: 518 MVAVEALARWRHAERGEIAPCSFIRLAEETKLILPLGGWMARTAIGQFRLWRERGMELDY 577 Query: 581 FAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELG 640 +IN S + F + + L ++ +E L E+TE+ + + + + L L++ G Sbjct: 578 VSINTSGIELFDPGFVDGLFEALDEHGLEGRHLQIELTENVLMQDYEACRRVLLRLRQQG 637 Query: 641 CQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLV 700 +IAIDDFGTGY+S A LK + D+LKID SFI+++ + D IV +I +A + Sbjct: 638 VRIAIDDFGTGYSSLAYLKQLPIDMLKIDRSFIKDVPGDPGDCAIVETIIAMAHRLGLAT 697 Query: 701 VAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNE 739 VAE VE EE + +L++G + +QGY +P + Sbjct: 698 VAEGVETEEQEDYLLAIGCERLQGYRYARPLDPVSLERL 736 >UniRef50_Q221U3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q221U3_RHOFD Length = 1037 Score = 665 bits (1716), Expect = 0.0, Method: Composition-based stats. Identities = 110/474 (23%), Positives = 195/474 (41%), Gaps = 21/474 (4%) Query: 282 QNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNV 341 + I+ G + + V + + T ++ +IQ+LA+ D + LPN Sbjct: 567 KKNGDIFHGLMSAEKVRFKD--VDCILSITRDI--TEKKLAEAQIQQLAHFDQLTGLPNR 622 Query: 342 RALNRA--------LRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEP 393 L+ R A+ +L + + + G + Q +S L L Sbjct: 623 SQLHDRFRYALSLAQRHGDQLAIMFLDLDHFKNINDTLGHSVGDQLLVDVSRRLKAALRE 682 Query: 394 GEDVYQLSGNDLALRLNTESHQERITALDSHLKQF---RFFWDGMPMQPQIGVSYCYVRS 450 + + +L G++ L L + + + + + + L + + + + + Sbjct: 683 EDSLSRLGGDEFILLLPG-TDEAQASQVATKLLAAVAQPCQIEQNELVSTVSIGIALYPN 741 Query: 451 PVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFF 510 L + A + V A N R +Q + ++N L+ AL + F Sbjct: 742 DGQDFETLSKNAD--AAMYRVKQASRNDFRFFTQEMQTHSARTLQLVNALRHALPRHEFE 799 Query: 511 LMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQF 568 L QP ++ V E LLR + +ISP F+P+A + G +I WV+ ++ Sbjct: 800 LHFQPQVALQDGHIVGAEALLRWRHPELGMISPAEFIPIAEDSGQILAIGEWVLRTAVRQ 859 Query: 569 MAEN-RAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVK 627 + + A + A+NLS V+++L + + L E+TE+ A+ + Sbjct: 860 LKQWLDAGLRPMVIAVNLSAVQFRHPNLMALVTRILDEAALPPEFLELELTEAAAMDDPP 919 Query: 628 QAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVA 687 A + L E G +++IDDFGTGY+S + LK + LKID SF+R+I + D IV Sbjct: 920 AAIAIMNKLDEHGIRMSIDDFGTGYSSLSYLKKFKVNKLKIDQSFVRDISDDPDDKAIVT 979 Query: 688 SICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIE 741 +I +LA M +AE VE + G D +QGY + KP P + Sbjct: 980 AIINLASSLGMHTIAEGVETASQLAFLRLQGCDEVQGYYVSKPLPKDQFEAFVR 1033 >UniRef50_Q47H73 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47H73_DECAR Length = 585 Score = 665 bits (1716), Expect = 0.0, Method: Composition-based stats. Identities = 108/473 (22%), Positives = 196/473 (41%), Gaps = 19/473 (4%) Query: 282 QNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNV 341 + P S + + + + + + Q+A +RI+ LA D + LPN Sbjct: 112 RKDGSTLPIMVLGSP--SVIGGLPASVGTVLDI--SAQKAAEQRIRELADYDVLTGLPNR 167 Query: 342 RALNRA--------LRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEP 393 R L R+ A+ +L + + + + G + + +++ L ++ Sbjct: 168 RLLRERFEQLLAAAEREKSEIAVIFLDLDHFKRVNDSLGHSVGDELLCEVARRLDSVVRR 227 Query: 394 GEDVYQLSGNDLALRLNTESHQERITALDSHLKQF--RFFWDGMPMQPQIGVSYCYVRSP 451 + + +L G++ + + ++ F F G + + Sbjct: 228 IDTLARLGGDEFIFAMPGFHTAAAVEVARRLVEVFSRPFEVAGHELTVTPSLGISIYPHD 287 Query: 452 VNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFL 511 + LL +T + N + + + D++ M + L++AL N F L Sbjct: 288 GRDLETLLRNADTA--MYRAKEMGRNAFQFYSSEMNTTTLDRLLMESNLRRALVQNEFIL 345 Query: 512 MAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFM 569 QP+ + + E L+R LI PD F+ VA E GL + I WV+ + Sbjct: 346 HYQPLVNLETGLIIGVEALIRWLHPELGLIMPDRFIHVAEETGLINPIGDWVLCEACRQA 405 Query: 570 AEN-RAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQ 628 A +P A+N++P QA F V+ LA ++A +L E+TE + + Sbjct: 406 KAWCDAGLPPICMAVNVAPVQFRQAGFVEMVAGALATSGLDASRLELELTERTVMHDADI 465 Query: 629 AQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVAS 688 TL L +G ++++DDFGTGY+S A LK LKID SF+ ++ ++ D+ I ++ Sbjct: 466 NMGTLSALHRMGVELSLDDFGTGYSSLAYLKRFPVGKLKIDRSFVNDLETDPDDWAIAST 525 Query: 689 ICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIE 741 I + R +M V+AE VE E + +G D QGY +P + + Sbjct: 526 IVSMGRSLRMTVLAEGVEKVEQLALLRKMGCDMAQGYYFSRPMSADGMADMLR 578 >UniRef50_A4ACX6 Sensory box/GGDEF/EAL family protein n=1 Tax=Congregibacter litoralis KT71 RepID=A4ACX6_9GAMM Length = 793 Score = 665 bits (1716), Expect = 0.0, Method: Composition-based stats. Identities = 115/521 (22%), Positives = 218/521 (41%), Gaps = 28/521 (5%) Query: 232 MPLNEKSTIFSTNYTL--SLLLPLMMWGAMRYGYKLISLLWA-----VVLMISIHSYQNY 284 + + T Y+ ++ P + + R+ + +W V I + + Sbjct: 263 IRDVNAAFSRITGYSREDAIGQPTSLLRSGRHDGDFYADMWQTLQRDGVWRGEIWNRRKS 322 Query: 285 IPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNV--- 341 ++P T I F+ + + ++ + ++Q+LA+ DP+ +LPN Sbjct: 323 GTVFPELLTISKIDGPDG---GFMAIFTDI--SQLKETEEQLQKLAHYDPLTNLPNRFLV 377 Query: 342 -----RALNRALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGED 396 ++ RA R + A+ +L I + + + G + + ++ L LL + Sbjct: 378 NECLEHSIRRAQRRSDHLAVFFLDIDSFKNINDSLGHFAGDKLLKTTANRLKALLRDDDS 437 Query: 397 VYQLSGNDLALRLNTESHQERITALDSHL---KQFRFFWDGMPMQPQIGVSYCYVRSPVN 453 V ++ G++ + L+ S + T + + + +G + + Sbjct: 438 VGRIGGDEFLMVLDDISTPDDATHIAEKIIGALRKPMILEGRSISVSASIGISIYPEDGQ 497 Query: 454 HIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMA 513 L+ + A + + + R + +L R+ V + + L++A+ F L Sbjct: 498 TAETLMSNAD--AAMYNAKDQGRDTFRFYSEHLTRQAFQNVLIDSALREAVSRQEFRLAF 555 Query: 514 QPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAE 571 QP + E+LLR +SP F+P A GL I WV+E + + Sbjct: 556 QPQVNTDNGSLLGLEVLLRWHHLTLGTVSPSQFIPQAERTGLIRDIGHWVLEQSCLQGSR 615 Query: 572 N-RAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQ 630 + A+N+S F +V ++LA + +L E+TES + + ++ Sbjct: 616 WIAEGLQFGHLAVNVSAPQFRAEDFVAQVRKVLADTEFPPEKLELELTESVLVHDTEKLI 675 Query: 631 ITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASIC 690 + L+ LG AIDDFGTGY+S + LK + D LK+D SF+ +IVS+ D I ++ Sbjct: 676 ENMHELRALGVMFAIDDFGTGYSSLSYLKRMPIDRLKLDKSFVDHIVSDDSDRIIAGAVL 735 Query: 691 HLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQ 731 L + + V+AE +E E + SLG + QGYL G+P Sbjct: 736 ALGKAMGLPVIAEGIEQEAQARVLQSLGCKHFQGYLYGRPM 776 >UniRef50_Q74FR9 Sensory box/GGDEF family protein n=1 Tax=Geobacter sulfurreducens RepID=Q74FR9_GEOSL Length = 682 Score = 664 bits (1715), Expect = 0.0, Method: Composition-based stats. Identities = 105/476 (22%), Positives = 200/476 (42%), Gaps = 18/476 (3%) Query: 284 YIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRA 343 I ++ ++ + + + + T ++ IQ+LAY D + LPN Sbjct: 198 DGSIRDIIFSKTVFGNTDGSIGGIVGTILDI--TERKRAEEAIQQLAYFDALTGLPNRTL 255 Query: 344 LNRA--------LRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGE 395 L R+ + +L + + + + G ++ ++ + + Sbjct: 256 LRDRVSQLLSQARREGGGFGVLHLDVDRFKGVNDSLGHACGDVLLSTVAGRIASSIRESD 315 Query: 396 DVYQLSGNDLALRLNTESHQERITALDSHLKQF---RFFWDGMPMQPQIGVSYCYVRSPV 452 V +L ++ + L H+E + A+ + + G + + + Sbjct: 316 TVARLGSDEFVVILPGVGHEEDVVAVVRKIVEELNRPIVIQGNDIFCTASIGIAIYPTDG 375 Query: 453 NHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLM 512 + +LL + + + + + L +++ + L++ALE F L Sbjct: 376 SSADILLKNADMA--MHKAKEFGGDGYQFYSSELNHRAMERLTLETSLRRALERREFLLH 433 Query: 513 AQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMA 570 QP+ G+ V E LLR ++SP F+P+A E GL I WV+ + + Sbjct: 434 YQPLLGIGSGRIVGVEALLRWDSPELGMVSPARFIPLAEETGLIVPIGEWVLRSACEQLR 493 Query: 571 E-NRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQA 629 + ++N+S F V+ +LA ++ L E+TES + + A Sbjct: 494 ALHELGYTELCVSVNVSARQFRHDGFCAMVAAVLAAVGLDPRYLELELTESVIMERSETA 553 Query: 630 QITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASI 689 + L+ L+++G +AIDDFGTGY+S + LK+ D LKID +F++ + + + I +I Sbjct: 554 KGILRKLKQMGVSLAIDDFGTGYSSLSYLKHFPIDRLKIDRTFVKEVTVDQDNAAIAEAI 613 Query: 690 CHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIRE 745 LA + + VVAE VE E + +L D +QGY I +P P + L +E +E Sbjct: 614 VALAHVLNLDVVAEGVETAEQLAFLAALRCDVVQGYHIARPLPPRNLLEFLEARQE 669 >UniRef50_B9ZJP5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZJP5_9GAMM Length = 1092 Score = 664 bits (1715), Expect = 0.0, Method: Composition-based stats. Identities = 116/509 (22%), Positives = 209/509 (41%), Gaps = 27/509 (5%) Query: 255 MWGAMRYGYKLISLLWAVV-----LMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIV 309 M+ + R+ + + + I + + I+P + + + ++ Sbjct: 579 MFQSGRHDQAFYANMRRQLETEGHWQGEIWNRRKTGEIFPELQSITAVRDDQGRLTHYVS 638 Query: 310 NYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRAL--------RDAPWSALCYLRI 361 + + +R +A + LA+ DP+ LPN R L L R A+ + + Sbjct: 639 VFADI--SRLKASEAELDFLAHHDPLTELPNRRLLRARLAQAIALMRRRNGLLAILIIDV 696 Query: 362 PGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITAL 421 + + + G + + ++ L + V +L+ ++ A+ + +H + + Sbjct: 697 DRFKDINDSRGHAAGDRLLKIVADRLQAGQRGTDTVARLASDEFAVLADNLAHVDDAALV 756 Query: 422 DSHLKQF---RFFW-DGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPEN 477 + + DG+ + + LL + T LS Sbjct: 757 AEDILREVGRPVDLGDGVEFEIAATIGIAVFPDHGADAETLLQQAGTA--LSRAKEDGRG 814 Query: 478 MQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDV--YHEILLRMKGEN 535 R + ++++ + RL++A+E + + QP + V E LLR Sbjct: 815 GYRYYSDAFTEAARERIDLNARLRRAIEQDSLEVHYQPQYRVSDGVLIGAEALLRWTDPE 874 Query: 536 DELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENR-AKMPAHRFAINLSPTSVCQAR 594 +SP F+PVA + GL + WV+ L R A PA R A+N+S + Sbjct: 875 LGPVSPGRFIPVAEQTGLIVELGDWVLRRVLAQGQAWRDAGYPAVRLAVNVSALQFQRVA 934 Query: 595 FPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYAS 654 +V+ LL + A L E+TES +++ ++A+ LQ L+E G A+DDFGTGY+S Sbjct: 935 IDHQVADLLEGHGYPAKYLELEITESALMSDPERARRILQRLRERGVSFAVDDFGTGYSS 994 Query: 655 YARLKNVNADLLKIDGSFIRNI---VSNSLDYQIVASICHLARMKKMLVVAEYVENEEIR 711 A+LK D LK+D SF+ + ++ D I +I L + V+AE VE E Sbjct: 995 MAQLKRFPVDTLKVDKSFVDGLAAGAHDADDRSIARAIVALGHGLGLSVLAEGVETREQL 1054 Query: 712 EAVLSLGIDYMQGYLIGKPQPLIDTLNEI 740 A+ LG D+ QGYL +P P + Sbjct: 1055 GALRELGCDHYQGYLASRPLPAEHFAALL 1083 >UniRef50_A6QAC3 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6QAC3_SULNB Length = 813 Score = 664 bits (1715), Expect = 0.0, Method: Composition-based stats. Identities = 105/480 (21%), Positives = 191/480 (39%), Gaps = 27/480 (5%) Query: 280 SYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRI-------QRLAYV 332 + + T I V +V + ++ + + A+ Sbjct: 334 YIRADGEKFLAEVTLTPIMLGKRHVIYTVV----RDISDKKKAQQELLKQKDILHHQAHH 389 Query: 333 DPVVHLPNVRALNRALRDA--------PWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLS 384 D + LPN + L AL ++ + + + + G + + +S Sbjct: 390 DALTGLPNRTLFSDRLEHGLKLAERHLGKLALFFIDLDNFKQINDSLGHQIGDKVLVVVS 449 Query: 385 HWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLKQF---RFFWDGMPMQPQI 441 L + + + +L G++ + + ++++ L +++ +G + Sbjct: 450 KRLKAKIRQEDTLARLGGDEFTIIMENFKDVQQVSVLAQKIQKVLNQPMHIEGHTLYISC 509 Query: 442 GVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQ 501 + + + L+ + A + N + + + ++V M L+ Sbjct: 510 SIGISFYPQDTQNANDLVKYAD--AAMYKAKEEGRNNFQFYSTEMTTLAYERVVMEASLR 567 Query: 502 QALEHNHFFLMAQPITGMRGD--VYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDM 559 QA+++ F L QP + E L+R + + +I PD F+P+A E GL ID Sbjct: 568 QAIKNEEFILYYQPQVNAQTSRMTGMEALIRWEHPHLGMILPDKFIPLAEESGLILEIDR 627 Query: 560 WVIEHTLQFMAENRA-KMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVT 618 WV+ ++ + E A + ++NLS + F + + L E L FEVT Sbjct: 628 WVMRTAMKQVREWYARGLDPGVLSLNLSMRQLKDENFIDVIKEYLHMMSFEPEWLEFEVT 687 Query: 619 ESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVS 678 E + A +L ++ +G IAIDDFGTGY+S LK + LKID SFI I Sbjct: 688 EGQMMKRPDDAVASLGEIKSMGISIAIDDFGTGYSSLGYLKRLPVSRLKIDQSFIHGIPE 747 Query: 679 NSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLN 738 + + IV + LA+ + ++AE VENEE +E +L G MQGY G+P Sbjct: 748 DRENAAIVKATIALAKSLSLSIIAEGVENEEQKEFLLFNGCISMQGYYYGRPMTADQIEK 807 >UniRef50_B8HWB1 Diguanylate cyclase/phosphodiesterase with FHA and GAF sensor n=2 Tax=Cyanothece sp. PCC 7425 RepID=B8HWB1_CYAP4 Length = 884 Score = 664 bits (1715), Expect = 0.0, Method: Composition-based stats. Identities = 108/451 (23%), Positives = 193/451 (42%), Gaps = 19/451 (4%) Query: 308 IVNYMAVLAT---RQRAVVRRIQRLAYVDPVVHLPNVRALNRAL--------RDAPWSAL 356 ++ MAV + +++ + I+ A+ D + LPN L R ++ Sbjct: 423 VLAMMAVSISGAIQRQHKEQVIRYQAFHDLLTDLPNRALFIDRLNLALSNAHRSGEKLSV 482 Query: 357 CYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQE 416 +L + + + G + Q + ++H L+ L G+ + + G++ + L Sbjct: 483 LFLDLDRFKTINDTLGHSVGDQLLKAVAHRLTHCLREGDTIARWGGDEFTILLPQIHQVN 542 Query: 417 RITALDSHLK---QFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTN 473 + + + F + + + + L+ + L Sbjct: 543 DVAKTAQRMLSALEQPFHLENHELYITPSIGIAIYDLDGHDGETLIKHADMA--LYQAKQ 600 Query: 474 APENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGD--VYHEILLRM 531 N + L +++ + L+ ALE F L QP ++ E LLR Sbjct: 601 LGRNTYQFFCSGLSNGAPERLNLEKSLRHALERQEFLLYYQPQVNIKTGKITGMEALLRW 660 Query: 532 KGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENR-AKMPAHRFAINLSPTSV 590 K L+ P F+ VA E GL +I WV+ + +P A+NLS Sbjct: 661 KHPEMGLVIPQLFMSVAEESGLIVAIGEWVLRTACAQNKTWQDQGLPPICIAVNLSARQF 720 Query: 591 CQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGT 650 Q ++++L + + L E+TE+ A+ +++ + LQ LQ++G QI++DDFGT Sbjct: 721 RQPDLTGMIARILDETGLPPQYLDLEITETTAIQDIEFTKRVLQELQDMGIQISMDDFGT 780 Query: 651 GYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEI 710 GY+S A L+ + LKID SF+R++ +NS D QIV ++ LAR + VVAE VEN+E Sbjct: 781 GYSSLAHLQQFPLNTLKIDRSFVRDVAANSRDAQIVTAVIGLARGLNLNVVAEGVENDEQ 840 Query: 711 REAVLSLGIDYMQGYLIGKPQPLIDTLNEIE 741 + SL + QGY+ +P ++ Sbjct: 841 LNCLESLHCEEAQGYIFNRPLEADAATEILQ 871 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.316 0.181 0.639 Lambda K H 0.267 0.0554 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 5,618,803,946 Number of Sequences: 3077464 Number of extensions: 376091223 Number of successful extensions: 1232275 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 23209 Number of HSP's successfully gapped in prelim test: 2000 Number of HSP's that attempted gapping in prelim test: 1125266 Number of HSP's gapped (non-prelim): 37486 length of query: 747 length of database: 1,040,396,356 effective HSP length: 136 effective length of query: 611 effective length of database: 621,861,252 effective search space: 379957224972 effective search space used: 379957224972 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (20.7 bits) S2: 98 (41.9 bits)