29 c3civA_ Probab=99.95   E-value=6.8e-27  Score=204.96  Aligned_columns=274  Identities=12%

Q ss_pred             EEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCC---------------------HHHHHHHHHCCCE
Q ss_conf             9953320577776578889999999999999849979994077575---------------------8999899886989
Q batch____       289 YFTGFGRHEDADLRGKGFDNVLMVHDHALMDWIGANSYRTSHYPYA---------------------EEMLDWADEHGIV  347 (603)
Q Consensus       289 ~lrG~n~~~~~~~~g~~~~~~~~~~~l~~~k~~G~N~iR~~~~~~~---------------------~~~~d~aDe~Gil  347 (603)
                      ||||+|++......  ..+....+++|++||++|+|+||+.+++..                     ..+++.|++.||.
T Consensus         8 ~i~G~~~~~~~~~~--~~~~~~~~~~l~~l~~~G~N~vRi~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~A~~~Gl~   85 (316)
T c3civA_           8 FIRGMTFGFVGQHG--TWGTDEARASMRALAEQPFNWVTLAFAGLMEHPGDPAIAYGPPVTVSDDEIASMAELAHALGLK   85 (316)
T ss_dssp             CEEEEEESTTCBTT--GGGSHHHHHHHHHHHHSSCSEEEEEEEEEESSTTCCCCBCSTTTBCCHHHHHHHHHHHHHTTCE
T ss_pred             CCCCEEECCCCCCC--CCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCE
T ss_conf             21563414414778--8883689999999998399899982324777767765444767767978999999999868987


Q ss_pred             EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC------CCCCCHH
Q ss_conf             9970543456777766643556655424543589999999999999999984789719997112676------5673007
Q batch____       348 VIDETAAVGFNLSLGIGFEAGNKPKELYSEEAVNGETQQAHLQAIKELIARDKNHPSVVMWSIANEP------DTRPQGA  421 (603)
Q Consensus       348 V~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~V~r~~NHPsIi~w~~~NE~------~~~~~~~  421 (603)
                      |+.+++.+.........           ..+.............+.++++++.+||++++|.++||+      .......
T Consensus        86 Vil~~h~~~~~~~w~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~nE~~~~gne~~~~~~~  154 (316)
T c3civA_          86 VCLKPTVNCRDGTWRGE-----------IRFEKEHGPDLESWEAWFGSYSDMMAHYAHVAKRTGCEMFCVGCEMTTAEPH  154 (316)
T ss_dssp             EEEEEEEEETTCCCGGG-----------CCCSBSCCTTSSBHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEESCTTTTTC
T ss_pred             EEEECCCCCCCCCCCCC-----------CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHH
T ss_conf             99972358888765556-----------6767860125576999999999999879999874199858506777760014


Q ss_pred             HHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEE
Q ss_conf             89999999999986899738951367777654554334523440556556566222345777638888850045886189
Q batch____       422 REYFAPLAEATRKLDPTRPITCVNVMFCDAHTDTISDLFDVLCLNRYYGWYVQSGDLETAEKVLEKELLAWQEKLHQPII  501 (603)
Q Consensus       422 ~~~~~~l~~~ik~~Dptr~v~~~s~~~~~~~~~~~~~~~D~~~~~~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kPvi  501 (603)
                      ..+++++.+.||++||++++..+.  ..........+..|++++|.|+.++.        .......+.......+||++
T Consensus       155 ~~~~~~~~~~ir~~dp~~~~~~~~--~~~~~~~~~~~~~D~ig~~~Y~~~~~--------~~~~~~~~~~~~~~~~kPi~  224 (316)
T c3civA_         155 EAMWRETIARVRTEYDGLVTYNCN--HGREEHVRFWDAVDLISSSAYYPIDR--------WRDRVPVLREVAEAHEKPLF  224 (316)
T ss_dssp             HHHHHHHHHHHHHHCCSEEEEEEE--TTCTTTCSCGGGSSEEEEECCCCGGG--------HHHHHHHHHHHHHHHTCCEE
T ss_pred             HHHHHHHHHHHHHHCCCCEEEECC--CCCCCCCCCCCCCCEEEEECCCCCCC--------HHHHHHHHHHHHHCCCCCEE
T ss_conf             678999999999746997799446--88633345333457676314777430--------68899986546530588579


Q ss_pred             EEEECCCCCCCCCCCCCCC-----CCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCC
Q ss_conf             9720688863222467778-----88888999999999998867240379345434336768877886423602768887
Q batch____       502 ITEYGVDTLAGLHSMYTDM-----WSEEYQCAWLDMYHRVFDRVSAVVGEQVWNFADFATSQGILRVGGNKKGIFTRDRK  576 (603)
Q Consensus       502 ~sE~G~~~~~~~~~~~~~~-----~se~~qa~~~~~~~~~~~~~p~~~G~~~W~~~D~~~~~~~~~~~~~~~Givd~dr~  576 (603)
                      ++|+|..+..+.+......     ++++.|+.+++.++..+.+.|.+.|.++|.|.+..........      --++...
T Consensus       225 i~E~G~~~~~g~~~~~~~~~~~~~~~~~~Qa~~~~~~~~~~~~~~~~~G~~~W~w~~~~~~~~~~~~------d~~f~~~  298 (316)
T c3civA_         225 FMEVGCPSRSGSGACPWDYRHPGAVCLDEQARFYEAMFAAMPDEPWFKGYMLWEWPWKLYPREAASE------DGSYCIY  298 (316)
T ss_dssp             EEEECCCSBTTGGGSTTCTTCCCCBCHHHHHHHHHHHHHHSCCCTTEEEEEEEEECSSCCCGGGGGG------CCSSCCT
T ss_pred             EEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCC------CCCCEEC
T ss_conf             9701452235776676576664456989999999999999853778025999861687887332564------8852077


Q ss_pred             CCCHHHHHHHHHCCC
Q ss_conf             773389989997696
Q batch____       577 PKSAAFLLQKRWTGM  591 (603)
Q Consensus       577 pK~a~y~~k~~~~~~  591 (603)
                      +|||+.++|+.|+++
T Consensus       299 ~Kpa~~v~~~~~~~~  313 (316)
T c3civA_         299 GKPAEDVVARAFSAI  313 (316)
T ss_dssp             TSHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHH
T ss_conf             621899999999887