BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (301 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_Q47129 Transcriptional activator feaR n=22 Tax=Enteroba... 628 e-179 UniRef50_C4X7N3 2-phenylethylamine catabolism regulatory protein... 395 e-108 UniRef50_A8GAE8 Transcriptional regulator, AraC family n=1 Tax=S... 284 3e-75 UniRef50_B0KNJ7 Transcriptional regulator, AraC family n=1 Tax=P... 270 5e-71 UniRef50_Q1H4B9 Transcriptional regulator, AraC family n=1 Tax=M... 126 1e-27 UniRef50_B8ETQ3 Transcriptional regulator, AraC family n=1 Tax=M... 120 7e-26 UniRef50_A6W2J9 Helix-turn-helix-domain containing protein AraC ... 117 3e-25 UniRef50_B0V5B3 DNA-binding transcriptional dual regulator n=9 T... 115 3e-24 UniRef50_B0KKU7 Transcriptional regulator, AraC family n=10 Tax=... 114 3e-24 UniRef50_B2SCD0 Helix-turn-helix, AraC type n=39 Tax=Rhizobiales... 112 2e-23 UniRef50_A0NZA7 Probable transcriptional regulator n=1 Tax=Labre... 108 2e-22 UniRef50_Q0SCS8 Transcriptional regulator, AraC family protein n... 108 2e-22 UniRef50_A5EP12 Transcriptional regulator, AraC family n=3 Tax=B... 107 5e-22 UniRef50_Q4ZUB6 Helix-turn-helix, AraC type n=1 Tax=Pseudomonas ... 106 1e-21 UniRef50_Q0RX84 Transcriptional regulator, AraC family protein n... 105 2e-21 UniRef50_A5V4Y7 Transcriptional regulator, AraC family n=1 Tax=S... 105 2e-21 UniRef50_B8H6K6 Transcriptional regulator, AraC family n=2 Tax=A... 103 8e-21 UniRef50_B4E7T1 AraC family regulatory protein n=1 Tax=Burkholde... 103 9e-21 UniRef50_C5CKL4 Transcriptional regulator, AraC family n=1 Tax=V... 102 2e-20 UniRef50_B1GXZ7 Transcriptional regulator AraC family n=4 Tax=Rh... 102 2e-20 UniRef50_A2SM26 Transcriptional regulator, AraC family n=1 Tax=M... 102 2e-20 UniRef50_B9BG93 Transcriptional activator FeaR n=1 Tax=Burkholde... 100 7e-20 UniRef50_A1R5Y4 Transcriptional regulator, AraC family n=1 Tax=A... 100 8e-20 UniRef50_B1KM98 Transcriptional regulator, AraC family n=2 Tax=G... 99 1e-19 UniRef50_B0RKH8 AraC family transcription regulator protein n=1 ... 99 2e-19 UniRef50_Q0S4H2 Probable transcriptional regulator, AraC family ... 96 2e-18 UniRef50_B8HJE0 Transcriptional regulator, AraC family n=1 Tax=A... 96 2e-18 UniRef50_B2IIZ5 Transcriptional regulator, AraC family n=1 Tax=B... 94 4e-18 UniRef50_Q5YW11 Putative transcriptional regulator n=1 Tax=Nocar... 94 6e-18 UniRef50_B9K5S9 AraC-type DNA-binding domain-containing protein ... 94 6e-18 UniRef50_Q500U0 Helix-turn-helix, AraC type n=2 Tax=Pseudomonas ... 94 6e-18 UniRef50_B1Z4N2 Transcriptional regulator, AraC family n=6 Tax=B... 93 9e-18 UniRef50_UPI0001873BA5 Helix-turn-helix, AraC type n=1 Tax=Pseud... 93 1e-17 UniRef50_Q28KV9 Transcriptional regulator, AraC family n=1 Tax=J... 92 2e-17 UniRef50_Q89GD7 Transcriptional regulatory protein n=1 Tax=Brady... 92 2e-17 UniRef50_D1S730 Transcriptional regulator, AraC family (Fragment... 92 2e-17 UniRef50_C7Q9A2 Transcriptional regulator, AraC family n=1 Tax=C... 91 4e-17 UniRef50_A2SJ73 Transcriptional regulator, AraC family n=1 Tax=M... 91 4e-17 UniRef50_C3KC85 Putative AraC family regulatory protein n=1 Tax=... 91 5e-17 UniRef50_B5S3I4 Probable transcription regulator sugar transport... 91 5e-17 UniRef50_C3VA09 Putative transcriptional regulator n=1 Tax=Pseud... 91 6e-17 UniRef50_D2UCS7 Hypothetical hth arac/xyls-type dna-binding doma... 91 7e-17 UniRef50_A0K0Q9 Transcriptional regulator, AraC family n=2 Tax=A... 90 1e-16 UniRef50_Q5YXZ9 Putative transcriptional regulator n=1 Tax=Nocar... 89 1e-16 UniRef50_A9D6L8 Helix-turn-helix, AraC type n=1 Tax=Hoeflea phot... 89 1e-16 UniRef50_D0XME9 Transcriptional regulator, AraC family n=1 Tax=B... 89 2e-16 UniRef50_A1RDF3 Transcriptional regulator, AraC family n=1 Tax=A... 89 2e-16 UniRef50_A5EI80 Transcriptional regulator, AraC family n=2 Tax=B... 89 3e-16 UniRef50_A2SEG7 Transcriptional regulator, AraC family n=1 Tax=M... 89 3e-16 UniRef50_Q2IUH6 Transcriptional regulator, AraC family n=10 Tax=... 88 3e-16 UniRef50_B9K0H9 AraC-type DNA-binding domain-containing protein ... 88 3e-16 UniRef50_B1JB60 Transcriptional regulator, AraC family n=1 Tax=P... 88 4e-16 UniRef50_Q13VV6 Transcriptional regulator, AraC family n=2 Tax=P... 88 4e-16 UniRef50_B8GZF8 Transcriptional regulator, AraC family n=2 Tax=C... 88 5e-16 UniRef50_C4KLX3 AraC family regulatory protein n=30 Tax=pseudoma... 87 5e-16 UniRef50_B1M073 Transcriptional regulator, AraC family n=3 Tax=M... 87 6e-16 UniRef50_B4UYA5 AraC family regulatory protein n=1 Tax=Streptomy... 87 7e-16 UniRef50_B6YYX2 Transcriptional regulator, AraC family n=1 Tax=P... 86 1e-15 UniRef50_C8NQI1 AraC-type transcriptional regulator n=4 Tax=Cory... 86 1e-15 UniRef50_C6X6W8 Transcriptional regulator, AraC family n=1 Tax=M... 86 1e-15 UniRef50_UPI0001B4F487 putative transcriptional regulator n=1 Ta... 86 2e-15 UniRef50_C4WLC6 Helix-turn-helix domain-containing protein n=1 T... 86 2e-15 UniRef50_B2IIE7 Transcriptional regulator, AraC family n=1 Tax=B... 86 2e-15 UniRef50_C5AL79 Putative uncharacterized protein n=1 Tax=Burkhol... 85 2e-15 UniRef50_B7L1S2 Transcriptional regulator, AraC family n=1 Tax=M... 85 3e-15 UniRef50_B1LSW4 Transcriptional regulator, AraC family n=2 Tax=A... 85 3e-15 UniRef50_Q82RS6 Putative regulatory protein n=1 Tax=Streptomyces... 85 4e-15 UniRef50_B6R2R9 Transcriptional regulator, AraC family n=1 Tax=P... 84 4e-15 UniRef50_B9JQ03 AraC-type DNA-binding domain-containing protein ... 84 5e-15 UniRef50_C9NAR3 Transcriptional regulator, AraC family n=3 Tax=S... 84 5e-15 UniRef50_C3PKW7 Transcription regulator, AraC family n=2 Tax=Cor... 84 7e-15 UniRef50_A5EKU9 Transcriptional regulator, AraC family n=2 Tax=B... 84 8e-15 UniRef50_C3JMU3 Transcriptional regulator, AraC family n=2 Tax=R... 84 8e-15 UniRef50_C9YUR8 Putative transcriptional regulator n=1 Tax=Strep... 83 1e-14 UniRef50_A9D8L4 Transcriptional regulator, AraC family protein n... 83 1e-14 UniRef50_B2GIQ7 Putative AraC family transcriptional regulator n... 83 1e-14 UniRef50_A4Q9T5 Putative uncharacterized protein n=1 Tax=Coryneb... 82 2e-14 UniRef50_UPI000050F7EC transcriptional regulator, AraC family pr... 82 3e-14 UniRef50_C8X8B4 Transcriptional regulator, AraC family n=1 Tax=N... 82 3e-14 UniRef50_A5VEH1 Transcriptional regulator, AraC family n=1 Tax=S... 82 3e-14 UniRef50_A9E8K4 TRANSCRIPTIONAL REGULATOR, ARAC FAMILY n=1 Tax=O... 82 3e-14 UniRef50_C9NEM0 Transcriptional regulator, AraC family n=1 Tax=S... 81 4e-14 UniRef50_B1G4X3 Transcriptional regulator, AraC family n=1 Tax=B... 81 4e-14 UniRef50_B1LTK5 Transcriptional regulator, AraC family n=2 Tax=M... 81 5e-14 UniRef50_Q9S2C6 Putative regulatory protein n=3 Tax=Streptomyces... 81 5e-14 UniRef50_UPI0001B58708 AraC family transcription regulator n=1 T... 81 6e-14 UniRef50_A6X8D5 Helix-turn-helix-domain containing protein AraC ... 80 7e-14 UniRef50_Q140Z5 Transcriptional regulator, AraC family n=2 Tax=B... 80 7e-14 UniRef50_A2SKZ3 Transcriptional regulator, AraC family n=1 Tax=M... 80 8e-14 UniRef50_C0GAC0 AraC-family transcriptional regulator n=4 Tax=Br... 80 1e-13 UniRef50_UPI0001AF1428 AraC family transcription regulator n=1 T... 80 1e-13 UniRef50_B2JSH9 Transcriptional regulator, AraC family n=1 Tax=B... 79 1e-13 UniRef50_A8ICM9 Putative transcriptional regulator n=1 Tax=Azorh... 79 2e-13 UniRef50_A1WI21 Transcriptional regulator, AraC family n=1 Tax=V... 79 2e-13 UniRef50_C8Q8U1 Transcriptional regulator, AraC family n=1 Tax=P... 79 2e-13 UniRef50_B0T8Y9 Transcriptional regulator, AraC family n=1 Tax=C... 79 2e-13 UniRef50_C9Z7X5 Putative regulatory protein n=1 Tax=Streptomyces... 79 2e-13 UniRef50_UPI0001909644 transcriptional regulator, AraC family pr... 79 3e-13 UniRef50_Q7CU51 Transcriptional regulator, AraC family n=1 Tax=A... 78 3e-13 UniRef50_A5VUL5 Transcriptional regulator, AraC family n=1 Tax=B... 78 3e-13 UniRef50_A3XDY1 Transcriptional regulator, AraC family protein n... 78 4e-13 UniRef50_C0N2M9 Transcriptional regulator, AraC family protein n... 77 5e-13 UniRef50_A6W014 Helix-turn-helix-domain containing protein AraC ... 77 6e-13 UniRef50_A3VDL3 Helix-turn-helix, AraC type n=1 Tax=Rhodobactera... 77 6e-13 UniRef50_UPI0001B551BF AraC family transcriptional regulator n=1... 77 8e-13 UniRef50_B0SW51 Transcriptional regulator, AraC family n=1 Tax=C... 77 9e-13 UniRef50_Q0K404 Formamidase fused to an AraC-type HTH DNA-bindin... 77 9e-13 UniRef50_C6QB43 Transcriptional regulator, AraC family n=1 Tax=H... 77 1e-12 UniRef50_D1SW59 Transcriptional regulator, AraC family n=5 Tax=P... 77 1e-12 UniRef50_C6QDE9 Transcriptional regulator, AraC family n=1 Tax=H... 76 1e-12 UniRef50_B8IWN2 Transcriptional regulator, AraC family n=1 Tax=M... 76 1e-12 UniRef50_C6XP47 Transcriptional regulator, AraC family n=1 Tax=H... 76 2e-12 UniRef50_A1K9Y0 Putative AraC-like transcriptional regulator n=1... 76 2e-12 UniRef50_A7NK51 Transcriptional regulator, AraC family n=1 Tax=R... 76 2e-12 UniRef50_B1LSU0 Transcriptional regulator, AraC family n=1 Tax=M... 76 2e-12 UniRef50_A1VJU8 Transcriptional regulator, AraC family n=1 Tax=P... 76 2e-12 UniRef50_Q0RZY7 Transcriptional regulator, AraC family protein n... 75 2e-12 UniRef50_C9Z9W8 Putative DNA-binding protein n=1 Tax=Streptomyce... 75 3e-12 UniRef50_A9GLT2 Transcriptional regulator, AraC family n=1 Tax=S... 75 3e-12 UniRef50_A5VPA4 Transcriptional regulator, AraC family n=41 Tax=... 75 3e-12 UniRef50_D1TAE4 AraC family transcriptional regulator n=1 Tax=Bu... 75 3e-12 UniRef50_Q1N9N6 Transcriptional regulator, AraC family protein n... 75 4e-12 UniRef50_UPI0001B557E7 AraC family transcription regulator n=1 T... 74 4e-12 UniRef50_A9DHH2 Transcriptional Regulator, AraC family protein n... 74 5e-12 UniRef50_B2HDE9 Transcriptional regulatory protein n=1 Tax=Mycob... 74 6e-12 UniRef50_A1VU02 Transcriptional regulator, AraC family n=4 Tax=C... 74 6e-12 UniRef50_A1BAD0 Transcriptional regulator, AraC family n=1 Tax=P... 74 7e-12 UniRef50_A3KKG5 Putative transcriptional regulator n=1 Tax=Strep... 74 7e-12 UniRef50_Q38ZW3 Transcriptional regulator, AraC family n=2 Tax=B... 74 8e-12 UniRef50_B1M2F8 Transcriptional regulator, AraC family n=2 Tax=M... 74 9e-12 UniRef50_A5W3Z7 Transcriptional regulator, AraC family n=5 Tax=P... 73 1e-11 UniRef50_C5ALA2 Transcriptional regulator, AraC family protein n... 73 1e-11 UniRef50_Q2T6Z9 Transcriptional regulator, araC family n=39 Tax=... 73 1e-11 UniRef50_C3JZK1 AraC family regulatory protein n=1 Tax=Pseudomon... 73 1e-11 UniRef50_Q4KD45 Transcriptional regulator, AraC family n=4 Tax=P... 73 1e-11 UniRef50_Q71VU1 Transcriptional regulator, AraC family n=21 Tax=... 72 2e-11 UniRef50_C4WP68 Helix-turn-helix domain-containing protein n=2 T... 72 2e-11 UniRef50_C0RK84 Helix-turn-helix-domain containing protein AraC ... 72 3e-11 UniRef50_Q5FS53 Transcriptional regulator n=1 Tax=Gluconobacter ... 72 3e-11 UniRef50_B5GUE4 AraC family regulatory protein n=1 Tax=Streptomy... 72 3e-11 UniRef50_D0IZV7 Transcriptional regulator, AraC family n=1 Tax=C... 71 4e-11 UniRef50_Q5YUM1 Putative transcriptional regulator n=1 Tax=Nocar... 71 4e-11 UniRef50_C9PGF5 Transcriptional regulator AraC family n=1 Tax=Vi... 71 4e-11 UniRef50_A5EQH2 Transcriptional regulator, AraC family n=3 Tax=B... 71 4e-11 UniRef50_C8STG1 Transcriptional regulator, AraC family n=1 Tax=M... 71 4e-11 UniRef50_Q89RN6 Transcriptional regulatory protein n=1 Tax=Brady... 71 5e-11 UniRef50_B2UHP4 Transcriptional regulator, AraC family n=2 Tax=R... 71 5e-11 UniRef50_A5UV19 Transcriptional regulator, AraC family n=1 Tax=R... 71 6e-11 UniRef50_B5GVU7 AraC family regulatory protein n=1 Tax=Streptomy... 71 6e-11 UniRef50_A6UK34 Helix-turn-helix-domain containing protein AraC ... 70 6e-11 UniRef50_A9BNP3 Transcriptional regulator, AraC family n=3 Tax=C... 70 7e-11 UniRef50_D0XVC6 Transcriptional regulator, AraC family n=1 Tax=C... 70 7e-11 UniRef50_C5CWJ0 Transcriptional regulator, AraC family n=1 Tax=V... 70 8e-11 UniRef50_Q54308 Helix-turn-helix DNA binding protein n=2 Tax=Str... 70 8e-11 UniRef50_A1TIH4 Transcriptional regulator, AraC family n=2 Tax=A... 70 1e-10 UniRef50_Q2G766 Transcriptional regulator, AraC family n=1 Tax=N... 70 1e-10 UniRef50_C7HYF2 Transcriptional regulator, AraC family n=1 Tax=T... 69 1e-10 UniRef50_C5D1Y8 Transcriptional regulator, AraC family n=1 Tax=V... 69 1e-10 UniRef50_Q38ZZ8 Transcriptional regulator, AraC family n=1 Tax=B... 69 2e-10 UniRef50_B1M4R6 Transcriptional regulator, AraC family n=1 Tax=M... 69 2e-10 UniRef50_D2AT05 AraC family transcriptional regulator n=1 Tax=St... 69 2e-10 UniRef50_D0XZK5 Transcriptional regulator, AraC family n=1 Tax=C... 69 2e-10 UniRef50_Q0FYH5 Transcriptional regulator, AraC family protein n... 69 2e-10 UniRef50_C5SNU8 Transcriptional regulator, AraC family n=1 Tax=A... 69 3e-10 UniRef50_C7I4F1 Transcriptional regulator, AraC family n=1 Tax=T... 69 3e-10 UniRef50_C1AVG9 Putative AraC family transcriptional regulator n... 68 4e-10 UniRef50_Q0B5M9 Transcriptional regulator, AraC family n=4 Tax=B... 68 4e-10 UniRef50_B1Q2A8 Transcriptional activator for nphA1A2 n=4 Tax=No... 68 5e-10 UniRef50_A0SZ23 Putative transcriptional activator araC family n... 68 5e-10 UniRef50_B6A2N3 Transcriptional regulator, AraC family n=1 Tax=R... 68 5e-10 UniRef50_A5V7R9 Transcriptional regulator, AraC family n=2 Tax=S... 67 5e-10 UniRef50_D0MC89 Putative AraC-type regulatory protein n=3 Tax=Vi... 67 5e-10 UniRef50_C6XP49 Transcriptional regulator, AraC family with acet... 67 7e-10 UniRef50_C6C3E5 Transcriptional regulator, AraC family n=1 Tax=D... 67 7e-10 UniRef50_C9NEM1 Transcriptional regulator, AraC family n=1 Tax=S... 67 7e-10 UniRef50_Q7MEL5 AraC-type DNA-binding domain-containing protein ... 67 7e-10 UniRef50_A8L0T7 Transcriptional regulator, AraC family n=3 Tax=A... 67 9e-10 UniRef50_D0YX27 Hypothetical transcription regulator n=1 Tax=Pho... 67 1e-09 UniRef50_C3VA25 Putative transcriptional regulator IemR n=1 Tax=... 67 1e-09 UniRef50_Q8VUZ3 Cad gene transcriptional regulator n=2 Tax=Alpha... 66 1e-09 UniRef50_B5GLL9 AraC family regulatory protein n=2 Tax=Streptomy... 66 1e-09 UniRef50_A5EGC6 Transcriptional regulator, AraC family n=1 Tax=B... 66 1e-09 UniRef50_C8SUL6 Transcriptional regulator, AraC family n=1 Tax=M... 66 1e-09 UniRef50_UPI0001B58744 AraC family transcription regulator n=1 T... 66 1e-09 UniRef50_C5CTZ5 Transcriptional regulator, AraC family n=1 Tax=V... 66 2e-09 UniRef50_Q2T8K4 Putative transcription regulator protein n=4 Tax... 66 2e-09 UniRef50_Q47CB9 Transcriptional regulator, AraC family n=1 Tax=D... 66 2e-09 UniRef50_Q1YEQ1 Putative transcriptional regulator n=1 Tax=Auran... 66 2e-09 UniRef50_B7WVN7 Transcriptional regulator, AraC family n=1 Tax=C... 65 2e-09 UniRef50_Q92PG5 Transcription regulator AraC family n=1 Tax=Sino... 65 2e-09 UniRef50_P72312 Nitrilase regulator n=1 Tax=Rhodococcus rhodochr... 65 2e-09 UniRef50_B1T3D6 Transcriptional regulator, AraC family n=1 Tax=B... 65 2e-09 UniRef50_Q2IYF7 Transcriptional regulator, AraC family n=1 Tax=R... 65 3e-09 UniRef50_B8H192 Transcriptional regulator n=3 Tax=Caulobacter Re... 65 3e-09 UniRef50_A7IDZ1 Helix-turn-helix-domain containing protein AraC ... 65 3e-09 UniRef50_P82606 Uncharacterized protein in nit 5'region n=1 Tax=... 65 3e-09 UniRef50_C4NCJ6 AraC family transcriptional regulator n=1 Tax=St... 65 3e-09 UniRef50_Q2KTV5 AraC-family transcriptional regulator n=1 Tax=Bo... 65 4e-09 UniRef50_B9NWW0 Putative transcriptional regulator n=1 Tax=Rhodo... 65 4e-09 UniRef50_A5EN17 Transcriptional regulator, AraC family n=2 Tax=B... 64 5e-09 UniRef50_Q1LF91 Transcriptional regulator, AraC family n=1 Tax=C... 64 6e-09 UniRef50_C0ATQ8 Putative uncharacterized protein n=1 Tax=Proteus... 64 8e-09 UniRef50_P96427 AraC-type regulatory protein n=1 Tax=Rhodococcus... 64 8e-09 UniRef50_Q89UQ2 Transcriptional regulatory protein n=1 Tax=Brady... 64 9e-09 UniRef50_UPI0001B4D7D7 AraC family transcriptional regulator n=1... 64 9e-09 UniRef50_Q28K70 Transcriptional regulator, AraC family n=1 Tax=J... 64 9e-09 UniRef50_A7LYG4 Sensor protein n=7 Tax=Bacteroides RepID=A7LYG4_... 64 9e-09 UniRef50_C6WAU0 Transcriptional regulator, AraC family n=1 Tax=A... 63 1e-08 UniRef50_B4EG24 AraC family regulatory protein n=12 Tax=Burkhold... 63 1e-08 UniRef50_D1PBG8 Two-component system sensor histidine kinase/res... 63 1e-08 UniRef50_Q6LQ97 Hypothetical transcription regulator n=4 Tax=Pho... 63 1e-08 UniRef50_Q38ZV0 Transcriptional regulator, AraC family n=3 Tax=B... 63 1e-08 UniRef50_B7KY13 Transcriptional regulator, AraC family n=4 Tax=M... 63 2e-08 UniRef50_B0MKI2 Putative uncharacterized protein n=1 Tax=Eubacte... 63 2e-08 UniRef50_C7GBP3 DNA-bindng response regulator, AraC family n=2 T... 62 2e-08 UniRef50_B1ZL19 Transcriptional regulator, AraC family n=6 Tax=A... 62 2e-08 UniRef50_Q0FRN2 Transcriptional regulator, AraC family protein n... 62 2e-08 UniRef50_Q0S048 Probable transcriptional regulator n=1 Tax=Rhodo... 62 2e-08 UniRef50_D1T9I8 AraC family transcriptional regulator n=1 Tax=Bu... 62 2e-08 UniRef50_C6VSM8 Sensor protein n=1 Tax=Dyadobacter fermentans DS... 62 2e-08 UniRef50_UPI0001B4CF93 AraC family transcription regulator n=1 T... 62 2e-08 UniRef50_C6Q9S8 Transcriptional regulator, AraC family n=1 Tax=H... 62 2e-08 UniRef50_C8QGB6 Transcriptional regulator, AraC family n=2 Tax=E... 62 3e-08 UniRef50_C8Q6A0 Transcriptional regulator, AraC family n=1 Tax=P... 62 3e-08 UniRef50_D0XXU2 Transcriptional regulator, AraC family n=1 Tax=C... 62 3e-08 UniRef50_UPI0001787EAC transcriptional regulator, AraC family n=... 61 4e-08 UniRef50_A4U4I6 Transcriptional regulator, AraC family n=1 Tax=M... 61 4e-08 UniRef50_Q603U3 Transcriptional regulator, AraC family n=1 Tax=M... 61 4e-08 UniRef50_D0LBE5 Helix-turn-helix-domain containing protein AraC ... 61 4e-08 UniRef50_D1WYT1 Transcriptional regulator, AraC family n=2 Tax=S... 61 5e-08 UniRef50_B5JY44 Transcriptional regulator, AraC family, putative... 61 5e-08 UniRef50_A9C153 Transcriptional regulator, AraC family n=1 Tax=D... 61 5e-08 UniRef50_Q65Q30 HTH-type transcriptional activator rhaR n=1 Tax=... 61 5e-08 UniRef50_A5HV12 Probable transcriptional regulator n=1 Tax=Pseud... 61 5e-08 UniRef50_Q162N1 Transcriptional regulator, AraC family, putative... 61 5e-08 UniRef50_D0IBI1 Putative ARAC-type regulatory protein n=1 Tax=Gr... 61 6e-08 UniRef50_A0KD53 Transcriptional regulator, AraC family n=9 Tax=B... 61 6e-08 UniRef50_C0XNV4 Helix-turn-helix domain protein n=1 Tax=Coryneba... 60 6e-08 UniRef50_B5CW93 Sensor protein n=1 Tax=Bacteroides plebeius DSM ... 60 7e-08 UniRef50_Q0SJU4 Transcriptional regulator, AraC family protein n... 60 8e-08 UniRef50_Q3KZ34 Putative regulator AraC-type n=1 Tax=Pimelobacte... 60 8e-08 UniRef50_B5HV97 AraC-family transcriptional regulator n=2 Tax=St... 60 9e-08 UniRef50_Q1LFA2 Transcriptional regulator, AraC family n=1 Tax=C... 60 9e-08 UniRef50_C0FW59 Putative uncharacterized protein n=2 Tax=Clostri... 60 9e-08 UniRef50_B1FI04 Transcriptional regulator, AraC family n=1 Tax=B... 60 9e-08 UniRef50_B1ZAE8 Transcriptional regulator, AraC family n=1 Tax=M... 60 9e-08 UniRef50_D0KWJ8 Transcriptional regulator, AraC family n=1 Tax=H... 60 1e-07 UniRef50_B1HZR5 Transcriptional regulator (AraC/XylS family) n=1... 60 1e-07 UniRef50_C3JEA3 Transcriptional regulator, AraC family n=2 Tax=R... 60 1e-07 UniRef50_C3LC07 Transcriptional regulator, AraC family n=7 Tax=B... 60 1e-07 >UniRef50_Q47129 Transcriptional activator feaR n=22 Tax=Enterobacteriaceae RepID=FEAR_ECOLI Length = 301 Score = 628 bits (1620), Expect = e-179, Method: Compositional matrix adjust. Identities = 301/301 (100%), Positives = 301/301 (100%) Query: 1 MNPAVDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTW 60 MNPAVDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTW Sbjct: 1 MNPAVDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTW 60 Query: 61 QEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLL 120 QEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLL Sbjct: 61 QEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLL 120 Query: 121 LPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLL 180 LPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLL Sbjct: 121 LPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLL 180 Query: 181 RPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLV 240 RPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLV Sbjct: 181 RPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLV 240 Query: 241 VAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKF 300 VAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKF Sbjct: 241 VAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKF 300 Query: 301 R 301 R Sbjct: 301 R 301 >UniRef50_C4X7N3 2-phenylethylamine catabolism regulatory protein n=9 Tax=Enterobacteriaceae RepID=C4X7N3_KLEPN Length = 320 Score = 395 bits (1014), Expect = e-108, Method: Compositional matrix adjust. Identities = 186/293 (63%), Positives = 231/293 (78%), Gaps = 3/293 (1%) Query: 9 FQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDD 68 +Q+WL+ INQVCG+F R L E + G +D +A LK+STVT +GVNL RT E+K +D Sbjct: 31 YQRWLATINQVCGHFAARPLKESFHGEIDARYAGSLKVSTVTAAGVNLYRTRNEIKRDND 90 Query: 69 AWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQ 128 AWFYTVFQL+G+AI+EQD+RQV + AGDITL+DA+RPCS+ WQ++S+Q SLLLPR ++ Sbjct: 91 AWFYTVFQLAGEAIIEQDDRQVTLAAGDITLIDAARPCSIVWQQTSRQASLLLPR---QR 147 Query: 129 YFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPVLHQRE 188 P A RLD LPMVQLS RLL ESM LS +ESEAAL+A+ CLLRPVLHQR+ Sbjct: 148 VAPTGDITTACRLDKSLPMVQLSQRLLLESMGGTTLSASESEAALEAIACLLRPVLHQRD 207 Query: 189 SVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNR 248 RR +QFQK++ LID +I+ E LRPEW+A ETGMSVRSLYR+FAD+GLVVAQYI+NR Sbjct: 208 PAPSRRVKQFQKIIALIDASIQSEHLRPEWLASETGMSVRSLYRLFADQGLVVAQYIKNR 267 Query: 249 RLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKFR 301 RLD CA A+++ DDEKLAGIG+ WGFSD SHFST FKQRFG+TPG+YR++ R Sbjct: 268 RLDLCAQALQNVHDDEKLAGIGYRWGFSDHSHFSTAFKQRFGVTPGQYRKRCR 320 >UniRef50_A8GAE8 Transcriptional regulator, AraC family n=1 Tax=Serratia proteamaculans 568 RepID=A8GAE8_SERP5 Length = 302 Score = 284 bits (727), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 143/292 (48%), Positives = 192/292 (65%), Gaps = 2/292 (0%) Query: 9 FQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDD 68 F++WL++IN CG F R L ++G + A L+LS V + L RT QE+ SD Sbjct: 12 FEEWLAKINSACGRFCARTLGPGFSGAMQEFRAHALRLSVVDAAQTRLYRTQQEIARSDG 71 Query: 69 AWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQ 128 + F+TVFQL G ++MEQ +RQ + AGD+TL+DASR S +Q+ S+QISLL+PR+ LEQ Sbjct: 72 SHFFTVFQLRGSSLMEQGDRQAVLSAGDVTLIDASRTSSFTFQQDSRQISLLMPRSYLEQ 131 Query: 129 YFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPVLHQRE 188 + C RLDA +V+LS +L+ M + +S ESEA L A+ LLRP L R Sbjct: 132 SASDVQ--CVRRLDAQSSVVRLSRQLVLGCMQDTQMSAPESEAILNAVATLLRPALVDRV 189 Query: 189 SVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNR 248 R F + + ID +I+ LRPEWIA E G+SVRSLYRMFA +GLVVAQYI++R Sbjct: 190 VGGDSPPRSFSRTLAFIDTHIQSPQLRPEWIADELGVSVRSLYRMFARQGLVVAQYIKHR 249 Query: 249 RLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKF 300 RLD CA A+R A + +KLA I + WGF+D SHFST FK RFG++P EYR+++ Sbjct: 250 RLDLCAQALRSAPERQKLATISYDWGFADHSHFSTAFKSRFGVSPSEYRKQY 301 >UniRef50_B0KNJ7 Transcriptional regulator, AraC family n=1 Tax=Pseudomonas putida GB-1 RepID=B0KNJ7_PSEPG Length = 304 Score = 270 bits (690), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 133/302 (44%), Positives = 199/302 (65%), Gaps = 4/302 (1%) Query: 1 MNPAV---DNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLS 57 M PA D+ FQ WLSQ+N+ CG+F GR L + G L+ A + +S V + VNL Sbjct: 1 MIPATRITDDRFQAWLSQVNEACGHFNGRKLDPGFVGQLEKCQAGQISMSIVDMTQVNLF 60 Query: 58 RTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQI 117 R +E++ S +Y V Q++G + +E ++++ AGD+TL+DAS P +++ + S+Q+ Sbjct: 61 RGPREIRASGADNYYAVLQMAGTSHIEHQGARIELQAGDLTLIDASAPLDMHFHQRSRQL 120 Query: 118 SLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMV 177 SL+LPR +E CA+R++A P+ ++ ++ E+ +S+ ES+A L A++ Sbjct: 121 SLILPRARVESGTRGTGVACAKRIEAQTPLANMARLMMLETGRTRHMSDHESQAVLDALI 180 Query: 178 CLLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADK 237 LLRP + ++V ER F+K + LID I E L PE+IA E G+S+RSLYR+FA Sbjct: 181 ALLRPAI-SHDTVPGSHERMFRKALALIDQRITCEQLTPEFIAREVGISMRSLYRIFAKH 239 Query: 238 GLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 GLV+AQYIRNRRLDFCA+ +R+ A D+K++ +G+ WGFSD S+FST FK RFG+TPGEYR Sbjct: 240 GLVIAQYIRNRRLDFCAEHLRNPAMDQKVSSLGYAWGFSDSSYFSTAFKARFGVTPGEYR 299 Query: 298 RK 299 R+ Sbjct: 300 RQ 301 >UniRef50_Q1H4B9 Transcriptional regulator, AraC family n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H4B9_METFK Length = 327 Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 80/264 (30%), Positives = 137/264 (51%), Gaps = 14/264 (5%) Query: 44 LKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDAS 103 ++LST+ ++G+ + R E + + ++ V LSGQ ++EQ R+V + G++ L DA+ Sbjct: 61 MRLSTIRSNGITIQRQRGECRNASQDAYFAVILLSGQYLLEQHGREVFLQPGEMALYDAT 120 Query: 104 RPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQ------E 157 P ++ ++ + +PR LL + + A R+ +L M + ++ Sbjct: 121 SPHRIHCPGPFSKLIVSIPRALLRSHLAGVEHCTARRISPELGMSAIGTHFIRSAAQHAN 180 Query: 158 SMNNPALS--ETESEAALQAMVCLLRP-VLHQRESVQPRRERQFQKVVTLIDDNIREEIL 214 S+N P + ++ A L A + RP +H S R +V I++++ + L Sbjct: 181 SLNLPQFNSLAPQALALLAASLASARPDHIHYGRS----RSASLHRVRQFIEEHLHDHDL 236 Query: 215 RPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAADD-EKLAGIGFHW 273 IA TG+S R + +FAD+GL + +Y+ RRL+ C +R A + +A I FHW Sbjct: 237 DSSLIAAATGLSARYINSLFADEGLSLMRYVWQRRLEKCRQTLRQPAQHGQAIATIAFHW 296 Query: 274 GFSDQSHFSTVFKQRFGMTPGEYR 297 GF DQ+HFS FKQ FG++P YR Sbjct: 297 GFIDQAHFSRSFKQAFGVSPRAYR 320 >UniRef50_B8ETQ3 Transcriptional regulator, AraC family n=1 Tax=Methylocella silvestris BL2 RepID=B8ETQ3_METSB Length = 330 Score = 120 bits (300), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 87/267 (32%), Positives = 133/267 (49%), Gaps = 18/267 (6%) Query: 45 KLSTVTTSGVNLSRTWQE-VKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDAS 103 +LS + +S V L R +E + DA+F V LSG ++EQ+ ++V + GD+T+ DA+ Sbjct: 69 RLSVIRSSAVGLRRLPREPLLAGQDAYFVVVL-LSGDYVLEQEGKEVVLQPGDMTIYDAT 127 Query: 104 RPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNP- 162 RP ++ ++ L +PR LL + + A R+ + ++ R LQ N Sbjct: 128 RPHKIHCPRDFSKLILAIPRLLLRERMAGVEHCAALRIPGSGGIGSVASRFLQSCGKNAD 187 Query: 163 ALSETESEAALQAMVCLLRPVLHQRESVQP-------RRERQFQKVVTLIDDNIREEILR 215 + E A V L V SV+P R ++V L+++ + + L Sbjct: 188 EFAPNEILALADQAVDL---VTLAAASVRPGGFSLSRSRALSMRRVKALVEERLADLELD 244 Query: 216 PEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAI---RHAADDEKLAGIGFH 272 IA G+S R L +F D+G + +Y+ +RRL+ CA R A D L+ I F Sbjct: 245 TAKIARLAGLSARYLNGLFGDEGTSIMRYVWSRRLENCAKDFSDPRRAGD--PLSEIAFR 302 Query: 273 WGFSDQSHFSTVFKQRFGMTPGEYRRK 299 WGFSD SHFS FKQRFG P E+RR+ Sbjct: 303 WGFSDASHFSRAFKQRFGCAPREFRRR 329 >UniRef50_A6W2J9 Helix-turn-helix-domain containing protein AraC type n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W2J9_MARMS Length = 299 Score = 117 bits (294), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 85/311 (27%), Positives = 149/311 (47%), Gaps = 33/311 (10%) Query: 8 EFQQWLSQINQVCGNFTGRLLTERYTGV-------LDTHFAKGLKLSTVTTSGVNLSRTW 60 + W+ ++ +CGNF T + + LD H GL ++ + T+ + R+ Sbjct: 3 DLDHWVHSVHSICGNFD----THPHPNIPFIGNMRLDDH--NGLGVAHIETNAEKIVRS- 55 Query: 61 QEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLL 120 + DD ++ + Q G + + + G+I L+D+S P ++ Q +Q+S+ Sbjct: 56 -KSTSQDDKHYFVILQKKGVMGFSWSDNKDLLLPGEIALIDSSLPYDMHPQGLIQQMSVH 114 Query: 121 LPRTLLEQYFPHQK-----PICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQA 175 LPR ++ FP I R + + ++ L H+L NP E + +A A Sbjct: 115 LPRAYIDSLFPSHAQHRITKIAQSRSSSQMLLIML-HQLANTDCQNPYFQE-DGDALKCA 172 Query: 176 MVCLLRPVLHQ--RESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRM 233 + L++P L +S +ER Q ++ L++ EE L P IA E +S RSLYR+ Sbjct: 173 ISALIKPSLENMNHDSAFSMKERAKQHILRLLN----EENLSPGHIAKEMNISKRSLYRL 228 Query: 234 FADKGLVVAQYIRNRRLDFCADAIRHAADDEK----LAGIGFHWGFSDQSHFSTVFKQRF 289 F++ L VA +I R++ C + +AD K + + + WGFSD S FS FK+ Sbjct: 229 FSEDNLSVAHFILQMRIEKCCTDML-SADAAKRPLSITEVAYRWGFSDASQFSRAFKRIK 287 Query: 290 GMTPGEYRRKF 300 G++P ++R+ Sbjct: 288 GISPSQWRQSL 298 >UniRef50_B0V5B3 DNA-binding transcriptional dual regulator n=9 Tax=Acinetobacter RepID=B0V5B3_ACIBY Length = 304 Score = 115 bits (287), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 82/312 (26%), Positives = 142/312 (45%), Gaps = 28/312 (8%) Query: 1 MNPAVDNEFQQWLSQINQVCGNFTGRLLTER--YTGVLDTHFAKGLKLSTVTTSGVNLSR 58 MN V + W I VCGNF R + G + +++ + + + R Sbjct: 1 MNQYVSDALLTWTHHIKNVCGNFETDFDGTRNLFIGEVQCFLLGDTEIAFIKNNANKIVR 60 Query: 59 TWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQIS 118 E+ ++ + + + Q SG+ ++E + + GDI L+D S+Y Q QIS Sbjct: 61 KADEIDRVNNRFCFLILQYSGKMLLEYKNETLSLNEGDIVLVDPVETISMYPQGLVSQIS 120 Query: 119 LLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSE------TESEAA 172 + L R L ++ I E L +S LL+ + N + TE A Sbjct: 121 VHLSREKL-----LKENISTEYF-GKLITQNMSGFLLKNILKNMSAENIKLWYATEDGNA 174 Query: 173 LQ-AMVCLLRPVL-----HQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMS 226 + A++ L++P + H ++ + ER I +N+ + L P+ IA G+S Sbjct: 175 FEDALIALIKPTINYKNVHSSNNLMEKAER-------FIIENLAKPDLTPKLIAEHIGVS 227 Query: 227 VRSLYRMFADKGLVVAQYIRNRRLD-FCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVF 285 +R LYR+F + L + +YI+ +RL+ AD + + I WGF D +HFS +F Sbjct: 228 LRHLYRLFLQENLSINKYIQLKRLEKVKADLLDKKNKQSSITQIALKWGFWDGAHFSKIF 287 Query: 286 KQRFGMTPGEYR 297 K+ +G++P E+R Sbjct: 288 KKTYGISPKEFR 299 >UniRef50_B0KKU7 Transcriptional regulator, AraC family n=10 Tax=Pseudomonas RepID=B0KKU7_PSEPG Length = 314 Score = 114 bits (286), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 81/300 (27%), Positives = 144/300 (48%), Gaps = 13/300 (4%) Query: 9 FQQWLSQINQVCGNFTGRLLTER--YTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGS 66 ++W + + Q+CG F L + + G + T GL L+ + T+ N+ R + Sbjct: 11 LERWTTAMQQICGRFETELASNHSLFIGEVSTFSRAGLPLANLRTNAGNIRRLGENPTLD 70 Query: 67 DDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLL 126 DD + V Q +G + + Q QV + G++ L+D+ C + + +SL L R + Sbjct: 71 DDQHCFLVSQRAGHSTVSQGGLQVSLAPGELLLMDSVGRCEITPSGLIEHVSLALSREQV 130 Query: 127 EQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEA-ALQ-AMVCLLRPVL 184 +Y P+ ++ + ++ H L+ + + +S ++ ALQ A + LL P Sbjct: 131 RKYVQGSGPMFG-KISSSNACGRMLHVLMDQLCKDGNVSGDGAQGDALQTAFIALLEPGF 189 Query: 185 HQRESVQPRRERQFQK------VVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKG 238 +R P V +ID+++ + L P +AG +SVR LYR+F ++G Sbjct: 190 -ERNGEAPGNLGALSGANLRGYVQQVIDESLSQPGLTPANLAGRLNISVRHLYRLFEEEG 248 Query: 239 LVVAQYIRNRRLDFCADAIRHA-ADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 V +YI+ RL AD + + E + I + WGF+D +HFS FK++F +P +YR Sbjct: 249 DSVCRYIQRARLMRSADDLANPFFKGESITSIAYKWGFTDSAHFSRSFKKQFERSPKDYR 308 >UniRef50_B2SCD0 Helix-turn-helix, AraC type n=39 Tax=Rhizobiales RepID=B2SCD0_BRUA1 Length = 351 Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 80/300 (26%), Positives = 138/300 (46%), Gaps = 16/300 (5%) Query: 9 FQQWLSQINQVCGNFTGRLLT--ERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGS 66 + QW S + VCGNF + + + G G++ + V+ +SR W +++ Sbjct: 48 YDQWSSDLRSVCGNFNPQTVERGDDVVGAARRIDVCGMEFAHVSNDLDCISRGWDDIRRD 107 Query: 67 DDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQES-SKQISLLLPRTL 125 + + QL G +E +RQ + G+ L+D++RP + Y+ S +SL LPR L Sbjct: 108 AQEHLFLIVQLEGSCGLEHGDRQNILDVGECILVDSTRPTTFYFGGRFSNHLSLHLPRQL 167 Query: 126 LEQYFPHQKPI-CAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPVL 184 + Y + P A +L A PM + H L+ + M S++ S+ Q M R Sbjct: 168 M--YSDSRIPFDIARKLSAHDPMAHMLHALIAKIMATTE-SDSASQHLRQLMFNATRQAF 224 Query: 185 HQR------ESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKG 238 H S+ ++ Q V LID ++ E L W+A G+S+R+L + F G Sbjct: 225 HSTGESAPLHSLHDSASKRLQIVDLLIDRHLTETELSARWLATRLGISIRTLQQDFQGMG 284 Query: 239 LVVAQYIRNRRLDFCADAIRHAADDEK---LAGIGFHWGFSDQSHFSTVFKQRFGMTPGE 295 + IR++RL + I + + +A + + GF+D S+F+ FK+ F P + Sbjct: 285 VTCTMVIRDKRLRLAKEKIEQLKEQKSGGTIAEVAYSAGFNDISYFNRSFKELFDCAPTD 344 >UniRef50_A0NZA7 Probable transcriptional regulator n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NZA7_9RHOB Length = 312 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 77/264 (29%), Positives = 121/264 (45%), Gaps = 10/264 (3%) Query: 43 GLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDA 102 G+++ + SR E++ SD+A+F +F+LSG I+ Q +RQ ++ AGD L D+ Sbjct: 52 GIRVVECSCDPCEGSRRKPELRHSDEAYFGVLFELSGHEIIRQGDRQAELSAGDFVLWDS 111 Query: 103 SRPCSLYWQESSKQISLLLPR---TLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESM 159 R +++LL+P+ LE + L A + + R L Sbjct: 112 EREMDFKVTSRLHKLTLLIPKFRAKRLEWDVERFAGTVVKNLSAVSGISAEALRRLARDF 171 Query: 160 NNPALSETESEAALQAMVCLLRPVLHQRE---SVQPRRERQFQKVVTLIDDNIREEILRP 216 + E ++EA +Q ++ LL L R+ S F I +N+ + L P Sbjct: 172 TT--IEEKDAEAVMQPILSLLMATLTTRQEPASASMAHRDHFSAFCRFIRNNLEDGRLDP 229 Query: 217 EWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFC-ADAIRHAADDEKLAGIGFHWGF 275 +A G+S+R L+ +FA ++R RL C AD R D + I F WGF Sbjct: 230 RTVAEAHGVSLRYLHTVFAHNNDTCCNFMRRERLRRCHADLARPHCRD-TITEIAFRWGF 288 Query: 276 SDQSHFSTVFKQRFGMTPGEYRRK 299 +D +HFS FK FG+ P RRK Sbjct: 289 NDAAHFSRAFKAEFGIAPKTLRRK 312 >UniRef50_Q0SCS8 Transcriptional regulator, AraC family protein n=2 Tax=Rhodococcus RepID=Q0SCS8_RHOSR Length = 342 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 85/309 (27%), Positives = 131/309 (42%), Gaps = 22/309 (7%) Query: 6 DNEFQQWLSQINQVCGNFTGRLLTE----RYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQ 61 D +F+ W ++ E R+TG L T GL+LS V V++ RT Sbjct: 11 DGQFEHWRQAVSTAFVPLAVVSTAEDGPGRFTGTLRTTALGGLQLSEVGGHAVDVRRTRT 70 Query: 62 EVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLL 121 +K SD QLSG ++ QD+R+ +G GD + D S+P L++ L+ Sbjct: 71 SIKRSDPGLVKVGLQLSGSGVIVQDDREAVLGPGDFAVYDTSKPYDLHFAGDFSMFVLMF 130 Query: 122 PRTLLEQYFPHQKPICAERLDADLPM--------VQLSHRLLQESMNNPALSETESEAAL 173 PR LL + A R+ M L H ++ +M L E L Sbjct: 131 PRELLRIASRELGTVSARRIRGSTGMGALVSPFLTNLHHSVVTGTMPTTPLVEDAVLDLL 190 Query: 174 QAMVCLLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRM 233 A V P ++ P V + ID ++ + L +A +S R L +M Sbjct: 191 GAAVQSEAPA----DATAPGAS-LLLAVKSFIDAHLHDPTLDTAAVAAHHHVSTRHLQKM 245 Query: 234 FADKGLVVAQYIRNRRLDFC---ADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFG 290 F G VA +IR+RRL+ C IR D + I +G + SHFS +FK+ +G Sbjct: 246 FEADGHTVAGWIRHRRLEKCRRDLKDIRFRGD--SIGTICARYGLVNSSHFSRLFKETYG 303 Query: 291 MTPGEYRRK 299 ++P +R + Sbjct: 304 VSPRAFREQ 312 >UniRef50_A5EP12 Transcriptional regulator, AraC family n=3 Tax=Bradyrhizobium RepID=A5EP12_BRASB Length = 315 Score = 107 bits (267), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 70/293 (23%), Positives = 140/293 (47%), Gaps = 9/293 (3%) Query: 7 NEFQQWLSQINQVCGNF-TGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKG 65 ++ Q+W + +CG F L + G ++ LKL + S ++ T+ + Sbjct: 17 SQIQRWSDALTDLCGRFDIDPLEGASFEGRINFTTVSRLKLCQIEASQHRIAHTYARARD 76 Query: 66 SDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTL 125 ++ + +FQ G + EQD RQ++IG GD D S P ++ ++ +++P+ L Sbjct: 77 TEHPYIKILFQTYGVSYFEQDGRQIEIGPGDCLAYDVSSPHTIVSPALTRHDVVIVPKEL 136 Query: 126 LEQYFPHQKPICAERLDADLPMVQLSHRLLQESMN-----NPALSETESEAALQAMVCLL 180 L++ + + A +L A +++H + + + +P + + +E+ + ++ L Sbjct: 137 LQERGFRSEKMPAYKLSARSGTGRIAHDVTHAAFDEATRLSPNSAASVAESLIDLLLLPL 196 Query: 181 RPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLV 240 R + P E + + I +++R+ L + I+ G + R L+ +F+D+G+ Sbjct: 197 READRMLDRAGP--EAVYIRAQAFIREHLRDPDLCIDQISAALGCTKRYLHMVFSDRGMT 254 Query: 241 VAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTP 293 V+ YI RL C + + + + F WGFS SHFS VF++ FG+ P Sbjct: 255 VSDYIWRARLQHCRQELE-TQSGKTITDVAFSWGFSSSSHFSRVFRKYFGVVP 306 >UniRef50_Q4ZUB6 Helix-turn-helix, AraC type n=1 Tax=Pseudomonas syringae pv. syringae B728a RepID=Q4ZUB6_PSEU2 Length = 309 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 80/299 (26%), Positives = 148/299 (49%), Gaps = 20/299 (6%) Query: 6 DNEFQQWLSQINQVCGNFTGRLLTER-YTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVK 64 ++ F W ++ G + L E + G L+ + + + +S ++ R Q+ + Sbjct: 13 EDRFDAWQEVVSSTYGLVASQPLNEAPFDGRLNVRGQGSVTFTRIQSSPLHYRRLQQD-R 71 Query: 65 GSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRT 124 SD F L A++ Q++R+ + GAGDI L D+++P + + E QI L +PR Sbjct: 72 ESDH--FLLTLSLCPDALVVQNDRESRQGAGDIVLYDSAQPYACRYPEGDDQIVLTVPRK 129 Query: 125 LLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPVL 184 LL Q+ P + + LD + +++ +L E+ N LS+ SE +++ +L Sbjct: 130 LLLQHIPSAERLVCRTLDGHSALGRVAAVVLTEAWNAEGLSDPLSERLNASLLDVLSTAF 189 Query: 185 HQRESV--------QPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFAD 236 +SV Q + +Q Q++ + +N+ + L E IA T +S R+L R+FA Sbjct: 190 ---DSVFGDTDIRRQSHQMQQLQRIKQFLLNNLPDTGLTAENIALATHVSPRTLNRLFAR 246 Query: 237 KGLVVAQYIRNRRLDFCADAI--RHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTP 293 +G +++ +RL C DA+ RH +++ ++GF++ SHFS FK +G+ P Sbjct: 247 EGTTAIRWLWQQRLSACHDALLKRHV---RRVSDAALNFGFTNLSHFSRAFKNAYGIPP 302 >UniRef50_Q0RX84 Transcriptional regulator, AraC family protein n=2 Tax=Nocardiaceae RepID=Q0RX84_RHOSR Length = 345 Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 81/295 (27%), Positives = 131/295 (44%), Gaps = 32/295 (10%) Query: 17 NQVCGNFTGRL-LTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVF 75 + +FTG L +TE + ++ S V + RT +++ GS+ ++ Sbjct: 41 DAAAPDFTGHLRITELGSTIV----------SRVDAGAHTVRRTRKQISGSERGYYKLGL 90 Query: 76 QLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKP 135 QL G ++EQD R+ + GD L D +P +L + + + PR L Sbjct: 91 QLRGDGLLEQDGREALLRPGDFALYDTDQPYTLAFTAPTDMAVFMFPRPRLPLPPIMAHD 150 Query: 136 ICAERLDADLPMVQLSHRLL-----QESMNNPALSETESEAALQAMVCLL-------RPV 183 I A R+ + L LL Q N P + T ++A L M LL P+ Sbjct: 151 ILARRISRSDELGCLLSPLLVRLVDQVDDNRPNAALTLADAVLDLMAALLAGNNGTPEPL 210 Query: 184 LHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQ 243 H+ VQ + T ID N+ L P+ +A +S R L+++F+ G VA+ Sbjct: 211 PHETLLVQAK---------TFIDANLSNPDLNPDLVAAAVHVSTRYLHKLFSADGEPVAR 261 Query: 244 YIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRR 298 +IR+RRL+ C + ++ +G WG D +HFS FK RF M+P E+ + Sbjct: 262 WIRHRRLEQCRRDLSGHTAVPSVSAVGNKWGLPDAAHFSRAFKARFAMSPAEFHK 316 >UniRef50_A5V4Y7 Transcriptional regulator, AraC family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V4Y7_SPHWW Length = 329 Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 82/279 (29%), Positives = 128/279 (45%), Gaps = 14/279 (5%) Query: 29 TERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDER 88 ++ ++G L +++S V + + RT + GS F QL G + QD R Sbjct: 47 SDSFSGELRNIAFGAIQISMVESVAQRVRRTRSRIAGSTRDHFLLSLQLRGTGAICQDSR 106 Query: 89 QVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMV 148 ++ GD L D++RP L + +S Q+ L LPR + + A R+D + Sbjct: 107 VAKLSPGDFALYDSTRPYELRFDDSFSQVVLRLPRETVTGRLIDSHMLTARRIDGQRGVG 166 Query: 149 QLSHRLLQESMNNPALSETESEAALQA-MVCLLRPVLHQRESVQPR-RERQF---QKVVT 203 L+ +++ A + S LQA V L+ L ++ Q R E Q Q+V Sbjct: 167 LLASSFIRQLHEQRADIDDLSLGRLQANAVDLMATALAEQTGGQARTNEGQAIIRQRVCA 226 Query: 204 LIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRL-----DFCADAIR 258 ID N+ + L E IA G+S R L ++F V+ +I +RRL D + Sbjct: 227 FIDRNLGDHRLTCEGIASAHGISQRYLRKIFESSSTTVSDWIWSRRLEQAKADLSDPLLA 286 Query: 259 HAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 H + + IGF GF D +HFS F+ RFGM+P E+R Sbjct: 287 HVS----VTAIGFDVGFKDAAHFSRAFRSRFGMSPREWR 321 >UniRef50_B8H6K6 Transcriptional regulator, AraC family n=2 Tax=Actinomycetales RepID=B8H6K6_ARTCA Length = 321 Score = 103 bits (257), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 75/289 (25%), Positives = 137/289 (47%), Gaps = 21/289 (7%) Query: 20 CGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSG 79 GNF G+L + VLD + + VT + + RT + + + +F QL G Sbjct: 44 AGNFHGQLRSR----VLDR-----MSIVEVTATSHEVHRTPALIARAHERYFKLNLQLEG 94 Query: 80 QAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAE 139 ++ QD R+ + GD+ + D SRP +L ++++++ + ++ P L + + A Sbjct: 95 TGLLIQDNREAVLRPGDLAIYDTSRPYTLAFEDTTRIMVVMFPCDTLTLPTDYVGQLAAV 154 Query: 140 RLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVC-LLRPVLHQRESVQPRRERQF 198 R+ D + + + +++ N + S + L A L+ +LH + P R + Sbjct: 155 RMAGDSGLSGIVGQFIRQLSGNLDVLNGPSGSRLAANALDLVSTMLHAEMDISPDRMKP- 213 Query: 199 QKVVTL-----IDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFC 253 Q ++ + ID N+ + +L P IA +S R L+ +F + G VA +IR +RL+ Sbjct: 214 QALLAVAVREYIDANLSDPLLSPASIAAAHFISTRHLHNVFHESGTTVAGWIRTQRLEGA 273 Query: 254 ADAIR---HAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRK 299 +R HA + + WGF D +HFS F+ FG+ P ++RR Sbjct: 274 GRDLRDPLHAG--LPVGAVAARWGFLDAAHFSRTFRDAFGVPPSDWRRN 320 >UniRef50_B4E7T1 AraC family regulatory protein n=1 Tax=Burkholderia cenocepacia J2315 RepID=B4E7T1_BURCJ Length = 317 Score = 103 bits (256), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 77/279 (27%), Positives = 133/279 (47%), Gaps = 15/279 (5%) Query: 32 YTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQ 91 +TG +D + ++ V + + RT + V+ D F Q++G+ +EQD RQ Sbjct: 42 FTGHIDQGSLAYVDVAVVNSRAQEVHRTSRLVRQEDADLFLISVQVAGRGELEQDGRQAV 101 Query: 92 IGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLS 151 + AGD +L D +RP L +++ +Q+ L +PR L P + A + + L Sbjct: 102 LSAGDCSLYDTTRPYHLSFRDDFEQLVLSIPRDRLRIRIPAADRLTAIPIRGVNGLGSLF 161 Query: 152 HRLLQESMNN-PALSETESEAALQAMVCLLRPVLHQRESVQPR-----RERQFQKVVTLI 205 L+ N +++ E+ +++ L+ L S P ++ ++ + + Sbjct: 162 FDLVTSIPRNLESMTAQVRESVSNSVLDLVATALAGLPSPIPAPASNLKQFHLNRIKSYV 221 Query: 206 DDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAADDEK 265 +N+ + L IA GMSV SLYR FA +G ++Q+I ++RL C R A DE Sbjct: 222 IENLSDAELDIARIAQTLGMSVSSLYRAFASEGCPLSQWIWDQRLHAC----RKALLDES 277 Query: 266 LAG-----IGFHWGFSDQSHFSTVFKQRFGMTPGEYRRK 299 A I WGF+D +HFS F+++FG +P R + Sbjct: 278 CANLSAKQIAMSWGFNDPAHFSRAFRRKFGESPNALRTR 316 >UniRef50_C5CKL4 Transcriptional regulator, AraC family n=1 Tax=Variovorax paradoxus S110 RepID=C5CKL4_VARPS Length = 320 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 76/279 (27%), Positives = 128/279 (45%), Gaps = 15/279 (5%) Query: 32 YTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQ 91 + G + H L +S V + + RT + S D F Q GQ ++ QD R Sbjct: 43 FEGSIRQHTLPSLDVSVVRSGPQKVMRTPGHISRSGDDCFLVSIQARGQGVVRQDGRDAV 102 Query: 92 IGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDAD------- 144 + AGD L D++RP L + +S +QI L LP L H + + A + Sbjct: 103 LAAGDFALYDSTRPYQLLFDDSFEQIVLKLPGERLRSELHHTEALTATTVSGREGAGHLL 162 Query: 145 LPMVQLSHRLLQESMNN--PALSETESEAALQAMVCLLRPVLHQRE-SVQPRRERQFQKV 201 L M+ R L+E ++ PA + + +V L+ + R + +V Sbjct: 163 LGMI----RTLREDIDTLQPASALAVANGVQSILVAGLQTLPAARSPGLSSLTAYHLARV 218 Query: 202 VTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCA-DAIRHA 260 ID+ + + L +A + G+S ++R+F + L +QYI RRL+ C+ D + Sbjct: 219 KRRIDEQLADPSLSVGSLAAQLGVSASHIHRVFKSEPLTPSQYIWERRLEACSRDLLEAR 278 Query: 261 ADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRK 299 +A I + GF+D +HFS F++RFG +P E+R++ Sbjct: 279 LAGRPVAEIAYGRGFNDAAHFSRAFRERFGCSPREWRQQ 317 >UniRef50_B1GXZ7 Transcriptional regulator AraC family n=4 Tax=Rhodococcus RepID=B1GXZ7_RHOER Length = 326 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 80/281 (28%), Positives = 133/281 (47%), Gaps = 17/281 (6%) Query: 30 ERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLS-GQAIMEQDER 88 +R++G + + +++S V + + R+ +K SD A + + + G A++ QD+R Sbjct: 39 DRFSGAVHSAQLAHVRVSAVQSMEQRIVRSNSLIK-SDGADYLQIGMIRRGSAVVRQDDR 97 Query: 89 QVQIGAGDITLLDASRPCSLYWQ-ESSKQISL------LLPRTLLEQYFPHQKPICAERL 141 + + GD L D +RP WQ E + PR+ L + A Sbjct: 98 ECVLRRGDYVLYDTTRP--FDWQIEGHAHDGIWGLEVFTWPRSYLSLSDAEVTSLTAIAF 155 Query: 142 DADLPMVQLSHRLLQE--SMNNPALSETESEAALQAMVCLLRPVLHQR-ESVQPRRERQF 198 D + L R L + S+ + + + E + + L++ VLH + RR + Sbjct: 156 DGHAGLSGLLGRFLHDLASVRMTSDASGDEEEVVNEIGNLVKSVLHTTARPITSRRTSLY 215 Query: 199 QKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAI- 257 + +++ID I + L P IAG +S+R L+R FA+ G V++ IR+RRLD C I Sbjct: 216 ESALSVIDARIADPALSPVDIAGSVKVSIRQLHRAFAEHGTTVSRSIRSRRLDGCRREIV 275 Query: 258 -RHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 RH + L I WGF+D + FS FK FG++P YR Sbjct: 276 QRHGV-ERSLTQISHRWGFTDLAAFSRAFKAEFGISPRRYR 315 >UniRef50_A2SM26 Transcriptional regulator, AraC family n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SM26_METPP Length = 324 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 86/302 (28%), Positives = 140/302 (46%), Gaps = 20/302 (6%) Query: 4 AVDNEFQQWLSQI-NQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 A+ + F++W Q+ ++V F RL R+ V GL++ R + Sbjct: 36 ALSDNFRRW--QVPDRVAPEFNARL---RHRDV------AGLRVVECICDPCGGRRLPRH 84 Query: 63 VKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLP 122 V A+ SG+ + + +V +G GD+ + + +P E ++SL+LP Sbjct: 85 VSQEGAAYIGVQITRSGRESLRAGDERVAVGPGDLVIWTSDQPMEFTVTERLHKVSLILP 144 Query: 123 RTLLEQYFPHQKPICAERLDA--DLPMVQLSH-RLLQESMNNPALSETESEAALQAMVCL 179 +++ P LD+ + V SH L + + L E A +A V L Sbjct: 145 WDDVKERLPRTGRFRGTVLDSRSGIGAVLYSHIESLASQLED--LEAGELSAVRRATVEL 202 Query: 180 LRPVLHQRESVQPR--RERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADK 237 L + R PR +Q ++V I D++++E L P IA +S R L+ +F Sbjct: 203 LTAAMSCRLEPAPRGLSLQQLKRVQDYILDHLQDETLTPGSIAQAHHISPRYLHLLFGKT 262 Query: 238 GLVVAQYIRNRRLDFCADAIRHAADDE-KLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEY 296 G V+ YIR +RL+ C +A+ + + E +A I + WGF+D +HFS VFKQ FG PG Sbjct: 263 GQSVSAYIRQQRLERCGEALSNPSYREHSVAEIAYQWGFTDPAHFSRVFKQHFGHPPGHC 322 Query: 297 RR 298 RR Sbjct: 323 RR 324 >UniRef50_B9BG93 Transcriptional activator FeaR n=1 Tax=Burkholderia multivorans CGD1 RepID=B9BG93_9BURK Length = 330 Score = 100 bits (248), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 77/254 (30%), Positives = 125/254 (49%), Gaps = 32/254 (12%) Query: 65 GSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRT 124 GSD A + Q G +++ RQ+++ G+ T+ DA P ++ Q + I + +P Sbjct: 80 GSDIAPLFVALQTHGDSLLGDGVRQIRLLPGEWTVFDARCPFTISSQHCMELIFVNVPGL 139 Query: 125 LLEQYFPHQKPIC-----------AERLDADLPMVQLSHRLLQESMNNPALSETESEAAL 173 + Q P ++P+ + R+ +DL +V L R L+ +N A+S + Sbjct: 140 IPAQ--PPRQPLIYPTFEPSGTSGSARMFSDL-VVSL-FRELENVDSNIAISSVD----- 190 Query: 174 QAMVCLLRPVLHQRESVQ---PRR--ERQFQKVVTLIDDNIREEILRPEWIAGETGMSVR 228 LLR + +Q P + E Q + V+ I++++ + L P IA GMS+R Sbjct: 191 -----LLRNLFSDAFRIQCPWPAQPLETQRRAVLQFIEEHLSDPELSPPSIASALGMSIR 245 Query: 229 SLYRMFADKGL-VVAQYIRNRRLDFCADAIRHAADDE-KLAGIGFHWGFSDQSHFSTVFK 286 ++R+F G V +YI RR+ C++ +R A+ + I F WGFS HFS FK Sbjct: 246 QVHRLFKRAGSQTVGEYIWKRRIQRCSEELRSGANAALSVTTIAFRWGFSSSPHFSRAFK 305 Query: 287 QRFGMTPGEYRRKF 300 + GMTP EYRR F Sbjct: 306 KEMGMTPSEYRRNF 319 >UniRef50_A1R5Y4 Transcriptional regulator, AraC family n=1 Tax=Arthrobacter aurescens TC1 RepID=A1R5Y4_ARTAT Length = 328 Score = 100 bits (248), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 78/286 (27%), Positives = 127/286 (44%), Gaps = 10/286 (3%) Query: 20 CGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSG 79 C GR E G + + L+ V S ++ RT + S D ++ Q G Sbjct: 32 CKAGDGR---ESIDGEIAVQTLASIDLARVRASAQSVHRTPAAIDASSDDYYLVGMQTEG 88 Query: 80 QAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAE 139 ++ QD R + G L D +RP SL + +Q+ + LPRT LE+Y P + A Sbjct: 89 SCLVTQDGRSAALHDGGFALYDTTRPYSLLLTDHFEQLVIRLPRTALERYLPEAARLTAL 148 Query: 140 RLDADLPMVQLSHRLLQESMNN-----PALSETESEAALQAMVCLLRPVLHQRESVQPRR 194 ++AD +L +Q N+ P ++ + S+ +V L + R R Sbjct: 149 AVNADPGAGRLLVNTVQFLANDIDVLSPDVALSVSQGVEHLIVAGLGGL--TRGVPDAHR 206 Query: 195 ERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCA 254 + + V T I +N+ +E L + IA + +S S++R FA G V ++ +RL Sbjct: 207 ISRRKLVQTHILENLGDESLSIKSIASDLHLSPSSIHRAFAADGETVMGWVWQQRLKSIR 266 Query: 255 DAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKF 300 + + + L + WGFSD SHFS F+QR+G P + R Sbjct: 267 ETLLTGRYEGTLTDLFLTWGFSDPSHFSRAFRQRYGHAPSQLLRPL 312 >UniRef50_B1KM98 Transcriptional regulator, AraC family n=2 Tax=Gammaproteobacteria RepID=B1KM98_SHEWM Length = 330 Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 80/299 (26%), Positives = 141/299 (47%), Gaps = 22/299 (7%) Query: 18 QVCGNFTGR----LLTERYTGVLDTHFAKGL-KLSTVTTSGVNLSRTWQEVKGSDDAWFY 72 Q+C F L +R+ G + GL +S V ++RT Q++ S +A+F Sbjct: 28 QICHEFVQLDCEPLNKDRFHGEIRGGLNFGLLSVSEVQGEAQIVTRTKQQIAHSSEAYFL 87 Query: 73 TVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPH 132 FQL Q +++Q+ R+ + G TL D+S P SL +++ Q+ + +P+ +L +Y H Sbjct: 88 MSFQLFQQGVVKQNGREAILQPGSFTLYDSSEPYSLTFEKEFHQLIIQMPKHVLSRYLIH 147 Query: 133 QKPICA------ERLDADLPMVQLSHRLLQESMN----NPALSETESEAALQAMVCLLRP 182 + A E + A L S +++E +P L E A C Sbjct: 148 PEKYTAVPLSGKEGIGAVLSNFIFS--VVKEYKELDTIHPELVENFLNMIAMAYSC---S 202 Query: 183 VLHQRESVQP-RRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVV 241 V+H + + ++ ++V++ I++N L + IA G+S+R LY++F + + Sbjct: 203 VMHNKLKKKALSKDALVERVLSYIENNYANHQLSNQHIADAHGISLRYLYKLFQKQEHTI 262 Query: 242 AQYIRNRRLDFCADAIRHAAD-DEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRK 299 Q I+ RRL ++ + D L + + GF+ SHFS FK FG P ++R+K Sbjct: 263 HQIIQKRRLMMSRQLLQEDSKFDFSLDSLSYAVGFTSSSHFSRAFKDYFGECPRDFRQK 321 >UniRef50_B0RKH8 AraC family transcription regulator protein n=1 Tax=Herbaspirillum seropedicae RepID=B0RKH8_HERSE Length = 350 Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 79/281 (28%), Positives = 134/281 (47%), Gaps = 12/281 (4%) Query: 27 LLTERYTGVLDTHFAKGLKLSTVTTSGV-----NLSRTWQEVKGSDDAWFYTVFQLSGQA 81 +L E++T + LST + V ++ R +E++ + + + FQL G Sbjct: 32 ILNEKHTVIDFAGEVSSRSLSTTAQTRVFSKAQHIQRRGEEIRRNPVEYCFANFQLEGSC 91 Query: 82 IMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERL 141 ++ QD ++ + GD +++D++RP L +Q +S +PR + A R+ Sbjct: 92 VVRQDGQESMVLPGDFSIVDSTRPYFLDYQGDWHVLSFRIPREQVISRLASPYKATARRV 151 Query: 142 DADLPMVQLSHR----LLQESMNNPALSETESEAALQAMVCL-LRPVLHQRESVQ-PRRE 195 D M ++ R L Q ++ + + AAL +++ + L L +E + P RE Sbjct: 152 DGKAGMGLVASRFARSLEQVDLDMGSGVQDCLSAALNSIIAIALGATLEAQERDRLPVRE 211 Query: 196 RQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCAD 255 V T I D++ E L P+ +A +S R+LY +F + L V+ IR RL A Sbjct: 212 AIRLAVETYIRDHLEEPHLGPDMLASRFKVSRRTLYSLFEEAPLSVSSLIRELRLQRSAR 271 Query: 256 AIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEY 296 + LA + WGFSD SHFS +FK+RFG+ P E+ Sbjct: 272 DLLSPGHPGVLA-VALRWGFSDASHFSRLFKRRFGVCPREF 311 >UniRef50_Q0S4H2 Probable transcriptional regulator, AraC family protein n=2 Tax=Rhodococcus RepID=Q0S4H2_RHOSR Length = 329 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 72/278 (25%), Positives = 123/278 (44%), Gaps = 16/278 (5%) Query: 32 YTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQ 91 + GV+ +++S VT + + RT + ++ ++ +F Q+ G ++ QD R+ Sbjct: 42 FRGVVRGVTVGAVRISEVTAAPHVIRRTPRTIRAANPDYFKLGLQVRGNCVLSQDGRETA 101 Query: 92 IGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLS 151 + GD + D +RP L + + + + ++ PR LL + A R+ + + Sbjct: 102 LTPGDFAIYDTTRPYQLSFDDRFRMLVVMFPRHLLRVPPDGVAQLTARRVPGGQGLGAVV 161 Query: 152 HRLL-----QESMNNPALSETESEAALQAMVCLLRPVLHQRESVQP--RRERQFQKVVTL 204 LL Q + +P ++ +A L + LH V P R + +V Sbjct: 162 TPLLRGLGEQIADASPTVAVHLGDAVLDLVAAAFAEQLHLAGGVLPQSRGDALLARVTAF 221 Query: 205 IDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYI-----RNRRLDFCADAIRH 259 ID+ + + L IA +SVR L +MF G V+ +I R D + R Sbjct: 222 IDERLADRDLDLHSIAAAHHISVRHLQKMFEADGDTVSGWIRRRRLEQCRRDLADPSYR- 280 Query: 260 AADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 D ++ IG WGF+D +HFS +FK G TPG YR Sbjct: 281 ---DLPVSAIGARWGFADAAHFSRLFKNAHGSTPGRYR 315 >UniRef50_B8HJE0 Transcriptional regulator, AraC family n=1 Tax=Arthrobacter chlorophenolicus A6 RepID=B8HJE0_ARTCA Length = 333 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 75/293 (25%), Positives = 127/293 (43%), Gaps = 29/293 (9%) Query: 21 GNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQ 80 G F G L + G+ + G L+ R + + +D + Q++G Sbjct: 48 GAFQGYLRNRKVAGIEFIEMSTGKHLA---------HRGAESISSTDRPDYLLCLQIAGV 98 Query: 81 AIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAER 140 QD R + GD+TL D +RP ++ + + + P+ L+ + A R Sbjct: 99 GEFSQDNRTAVLQPGDLTLFDTTRPTTVVSSTDYRNLCMKFPQRLINLPPEQLGQLTATR 158 Query: 141 LDADLPMVQLSHRLLQESMNNPALSETES--------EAALQAMVCLLRPVLHQRESVQP 192 A + LL +MN L +T S + AL + + + L P Sbjct: 159 TGARDGFAPAAGTLLI-TMNQ--LMDTSSGRSKILAAQGALDIITTMFQRQLDISTPSYP 215 Query: 193 RRERQ--FQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRL 250 + +++ + ID+N+ + L P IA +S+R L+ +F +GL VA ++R++RL Sbjct: 216 QATSPALLEQIRSYIDENLSDPGLGPRTIAAAHYISLRQLHGIFQAQGLTVASWVRHQRL 275 Query: 251 DFC----ADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRK 299 C +D HA A IG WGF SHF F++ FG+TP E+R++ Sbjct: 276 QRCRRDLSDPALHAV---SAASIGLRWGFKTASHFGMSFRKTFGLTPAEFRQE 325 >UniRef50_B2IIZ5 Transcriptional regulator, AraC family n=1 Tax=Beijerinckia indica subsp. indica ATCC 9039 RepID=B2IIZ5_BEII9 Length = 317 Score = 94.4 bits (233), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 61/263 (23%), Positives = 123/263 (46%), Gaps = 7/263 (2%) Query: 40 FAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITL 99 + G++L ++ N R+ E+ D + +FQ SG + + + + +G G++ + Sbjct: 49 LSGGVRLIELSGGPFNGERSRAEIARDGDEYLGVLFQRSGSTLCKVGDSRTLVGPGEVCV 108 Query: 100 LDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLL---- 155 + RP +++ LL+P + E + L + + L L Sbjct: 109 WLSERPTEFEMPSQFQKLCLLIPLSRFESVLHNATAYEGLHLPTNNHLTTLLGSYLTTLS 168 Query: 156 QESMNNPALSETES-EAALQAMVCLLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEIL 214 +E P +E+ + L+ + R V + QP + + +++ I+ + + L Sbjct: 169 EEVAAGPDGGSSEAVDVTLELLGAAFR-VYQSQFDHQPHYQLR-SRILRYIEARLDDASL 226 Query: 215 RPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWG 274 P IA G+S+R LY +F+++G+ VA ++R RRL C + + + + + + WG Sbjct: 227 TPLKIAKGNGISLRYLYLVFSEQGMTVAGWVRQRRLARCRAELDDVQNTKTITEVAYRWG 286 Query: 275 FSDQSHFSTVFKQRFGMTPGEYR 297 F+D +HFS +FK FG++P Y+ Sbjct: 287 FNDSAHFSRLFKSSFGVSPSAYK 309 >UniRef50_Q5YW11 Putative transcriptional regulator n=1 Tax=Nocardia farcinica RepID=Q5YW11_NOCFA Length = 324 Score = 94.0 bits (232), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 75/299 (25%), Positives = 132/299 (44%), Gaps = 9/299 (3%) Query: 6 DNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKG 65 D+ W Q+ L R+TG + ++ L+++ + S +++R + Sbjct: 16 DDSLLAWRVQVTDFFPPLAIEPLGARFTGSISGARSRELQVTEIVGSAHHVARRPAGHRT 75 Query: 66 SDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTL 125 SD +F QL G + Q + ++ G I + D ++P L + S+ + L P+ Sbjct: 76 SDGEYFKLNVQLDGHGFVRQAGNETRLAPGSIAIYDFAQPYDLVFDGDSRFLVALFPKDA 135 Query: 126 L---EQYFPHQKPICAERLDADLPMVQLSHRLLQESMN---NPALSETESEAALQAMVCL 179 L + D P+V R L E++ P+ ++ S L + Sbjct: 136 LGLPDALAADLMAAPLAADDGTAPLVSSYLRSLAENLGLLAGPSGAKV-SRVFLDLVTTF 194 Query: 180 LRPVLHQR-ESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKG 238 L L++R S + ++ IDD++ + L P +A +SVR L+++F G Sbjct: 195 LGEQLNRRIGSARADLGTLTMTILRYIDDHLADPDLDPARLAEAHHISVRYLHKLFEPTG 254 Query: 239 LVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 + V Q+IR RRL+ + A D +A + GF D +F VFKQ +GMTPG++R Sbjct: 255 VSVGQWIRQRRLEHARAELTGRA-DLAVAEVAHRSGFVDPGYFGRVFKQAYGMTPGQWR 312 >UniRef50_B9K5S9 AraC-type DNA-binding domain-containing protein n=1 Tax=Agrobacterium vitis S4 RepID=B9K5S9_AGRVS Length = 288 Score = 94.0 bits (232), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 64/274 (23%), Positives = 127/274 (46%), Gaps = 10/274 (3%) Query: 32 YTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQ 91 + G + H + +S + + ++RT ++ +A+ + Q++G + Q R Sbjct: 18 FRGAVTDHPFDEIGISNIASLKQTIARTTSGIRRDTNAYCFLNLQVAGTCRIRQGNRDAI 77 Query: 92 IGAGDITLLDASRPCSL-YWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQL 150 G+ T++D+S P L Y ++ +Q + +P+ + + + H+ A + P+ ++ Sbjct: 78 TMPGEFTVVDSSEPFLLDYTSDTWEQYAFKIPKHMFDSHVGHE--FVARTVTDRTPIGKV 135 Query: 151 SHRLLQESMNNP------ALSETESEAALQAMVCLLRPVLHQRESVQPRRERQFQKVVTL 204 L NP +++ T++ L AM + + R Q V+ Sbjct: 136 VVDFLASIARNPENLRHSSINMTKTIIDLVAMSLRASTPERDDDRRRTFRSPLRQSVLRY 195 Query: 205 IDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAADDE 264 ++ N + + P +A G+S R L+++ + G + Q I +RLD CA +R Sbjct: 196 VELNFADPEISPAKVAAHFGISTRYLHKLLEEHGETLGQIILAKRLDRCASELRKGTC-L 254 Query: 265 KLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRR 298 ++ F WGF+D S+FS F++RFG+ P +YRR Sbjct: 255 TISEAAFRWGFNDMSYFSRAFRRRFGVAPRDYRR 288 >UniRef50_Q500U0 Helix-turn-helix, AraC type n=2 Tax=Pseudomonas syringae group RepID=Q500U0_PSEU2 Length = 324 Score = 94.0 bits (232), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 71/274 (25%), Positives = 124/274 (45%), Gaps = 7/274 (2%) Query: 30 ERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQ 89 + + G L +H GL L V + R + SDD + L G+A + Q+ R+ Sbjct: 38 QNFQGRLRSHSVAGLGLVEVQACEQTVVRDTSSISRSDDEFVLVSLALEGRAQVSQEGRE 97 Query: 90 VQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQ 149 + GD + D RP L++ + Q + +PR L+Q + + + A + D P+ Sbjct: 98 AILEVGDFAIYDTRRPYRLHFDSAFSQTVVQIPRNSLQQRLCNLEYLTALSMSRDNPLNG 157 Query: 150 LSHRLLQ--ESMNNPALSETESEAALQAMVCLLRPVLHQRESVQP---RRERQFQKVVTL 204 L ++ N + E++ + + LL L +R Q RR ++ Sbjct: 158 LVFDFFTGLAALEN-RVGESQQARITEQGLDLLAMALSERVKGQAQGSRRSGLLLRIKDH 216 Query: 205 IDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHA-ADD 263 I N+ + L ++ G+S R + +F D+ +Y+ RL CA +R + Sbjct: 217 IQANLADTKLSLASVSVRFGVSTRYVSSLFQDEQTSFGRYLLGSRLQRCASDLREPLLAN 276 Query: 264 EKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 +++ I + WGFSD ++FS VF+QRFG+ EYR Sbjct: 277 RQISEIAWRWGFSDVAYFSRVFRQRFGVPAREYR 310 >UniRef50_B1Z4N2 Transcriptional regulator, AraC family n=6 Tax=Burkholderia cepacia complex RepID=B1Z4N2_BURA4 Length = 352 Score = 93.2 bits (230), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 70/267 (26%), Positives = 132/267 (49%), Gaps = 16/267 (5%) Query: 44 LKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDAS 103 L++S + S ++R + + + + ++ V L G +EQD + V + GD + DA+ Sbjct: 84 LRISDIHASEQAVTRRFHQARSEYEDKYFAVLMLEGSQSVEQDGKIVTLRPGDFAVYDAT 143 Query: 104 RPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQ-----LSHRLLQES 158 RP L + +S ++I + +PRT L Q + R +P Q + L Q S Sbjct: 144 RPHHLQFGQSWREIVVSIPRTTLNQLVVGME----HRTACPMPTGQGVGCVMRGFLEQMS 199 Query: 159 MNNPALSETE----SEAALQAMVCLLRPVLHQRESVQPR-RERQFQKVVTLIDDNIREEI 213 +SE E S+ A+ +++ + L + + Q R + +V + +++R+ Sbjct: 200 SQIRHVSEDEMLQLSDTAI-SLIAMTIGSLQRNDVAQSRMKALTLTRVKRHLLEHLRDPE 258 Query: 214 LRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHA-ADDEKLAGIGFH 272 L P + TG+S R + ++F + + +YI N RL+ CA+ + + +++ I Sbjct: 259 LNPTMVEQATGISSRYINKLFEAENTSLMRYIWNLRLERCAEDLANPQCGVLRVSDIALR 318 Query: 273 WGFSDQSHFSTVFKQRFGMTPGEYRRK 299 WGF+D SHFS F++RF + P +RR+ Sbjct: 319 WGFNDMSHFSRAFRERFAVAPRAWRRQ 345 >UniRef50_UPI0001873BA5 Helix-turn-helix, AraC type n=1 Tax=Pseudomonas syringae pv. tomato T1 RepID=UPI0001873BA5 Length = 311 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 64/221 (28%), Positives = 110/221 (49%), Gaps = 12/221 (5%) Query: 81 AIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAER 140 A + Q+ R+ + G GDI L D++RP + + E QI L +PR L ++ P+ + + Sbjct: 88 AFVVQNNRESRQGTGDIVLYDSARPYACGYPEGDDQIVLTVPRAFLLEHVPNAERLVCRT 147 Query: 141 LDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPVLH--------QRESVQP 192 L P+ Q++ LL E + L + + E A + +L L +RES Q Sbjct: 148 LSGQSPLGQIARTLLAEIWSIEPLPQQQGERLNAAFLDVLYTALDSAFALTDCKRESFQ- 206 Query: 193 RRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDF 252 +Q ++V + N+ + L E IA T +S R+L R+FA G V +++ +RL Sbjct: 207 --TQQLKRVKQYLLSNLPDAGLTVESIAQATHVSPRTLNRLFAPHGTTVIRWLWQQRLAA 264 Query: 253 CADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTP 293 C A+ +++ + GF++ SHFS FK +G++P Sbjct: 265 CHTALLK-GRARQVSDVALSMGFTNLSHFSRAFKNAYGVSP 304 >UniRef50_Q28KV9 Transcriptional regulator, AraC family n=1 Tax=Jannaschia sp. CCS1 RepID=Q28KV9_JANSC Length = 337 Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 73/275 (26%), Positives = 133/275 (48%), Gaps = 11/275 (4%) Query: 33 TGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQI 92 TG + + + S V + + RT + ++ D FQ+ G+ +++Q +RQV++ Sbjct: 41 TGSIASIGNGPISASLVDSVAQTVDRTRRLIRQDDAEVALISFQIEGECLLQQRDRQVRL 100 Query: 93 GAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSH 152 GD T+ D++ P L ++E Q+ L +PR LL + + ICA+R +D + Sbjct: 101 RPGDFTIYDSTSPYDLQFEEDFCQLVLHMPRDLLRRRLGPVRQICAQRFGSDTGANSFAG 160 Query: 153 RLLQE-SMNNPALSETESEAALQAMVCLLRPVLHQRESVQP-----RRERQF--QKVVTL 204 L++ ++ +L +E ++ + L+ + Q +VQP RR+ ++V + Sbjct: 161 AYLKQIALQLTSLETATAEHHIKTALDLVGYAVEQ--NVQPCGHDVRRQSAAIREQVAQV 218 Query: 205 IDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAADDE 264 I + R++ L +A G+S R L + A+ G I + RL+ +D +R A Sbjct: 219 ISKHFRDDQLSTPSLARAVGISSRRLQEVCAEVGTTPMNAIWDIRLEKASDMLRSPAFAH 278 Query: 265 -KLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRR 298 + I F GF D S FS +K +G+TP E R+ Sbjct: 279 LSITDICFACGFGDSSQFSRRYKTMYGVTPREDRK 313 >UniRef50_Q89GD7 Transcriptional regulatory protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89GD7_BRAJA Length = 331 Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 81/301 (26%), Positives = 137/301 (45%), Gaps = 15/301 (4%) Query: 9 FQQWLSQINQVCGNFTGRLLTE-RYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSD 67 F W +++ + RL+ E ++ + GL L + S R+ + + +D Sbjct: 27 FDYWHDVVSRNLVDLDFRLVGEAQFDASFHSTPINGLDLCRIKASPHVAQRSTEGILRAD 86 Query: 68 DAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLE 127 + F LSG + EQD R + GD L DA+RP L QE+ + S+ +PR Sbjct: 87 HSMLVFNFVLSGSLVAEQDGRLAHLKPGDGALCDATRPYKLSSQEAFELASIRVPREQCI 146 Query: 128 QYFPHQKPICAERLD--ADL-PMV--QLSHRL-----LQESMNNPALSETESEAALQAMV 177 PH + A L ++L PMV LSH + L +S+ + L + Sbjct: 147 GRIPHLNRLSACNLGERSELAPMVFGYLSHLVDRAPHLTSRAAGLKISQNFKDLLLALLA 206 Query: 178 CLLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADK 237 L S+ R ++ ++ N+ + L P IA E +S R + ++ + Sbjct: 207 ELADSCA---SSLTEYRSLALMRIKETVERNVHDPDLTPSTIAAELKLSARYINQLLETE 263 Query: 238 GLVVAQYIRNRRLDFCADAIRHAADDEK-LAGIGFHWGFSDQSHFSTVFKQRFGMTPGEY 296 G +++YI +RRL+ CA+ ++ A + ++ I GF+D SHFS F+ +FGM P +Y Sbjct: 264 GTSLSRYIWSRRLNRCAEQLKDPALRARGVSQIAMDNGFNDLSHFSKAFRIKFGMAPRDY 323 Query: 297 R 297 R Sbjct: 324 R 324 >UniRef50_D1S730 Transcriptional regulator, AraC family (Fragment) n=1 Tax=Micromonospora aurantiaca ATCC 27029 RepID=D1S730_9ACTO Length = 324 Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 77/260 (29%), Positives = 116/260 (44%), Gaps = 14/260 (5%) Query: 54 VNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQES 113 V+ RT + ++ SD ++ LSG + +Q+ ++ + GD+T D SRP + Sbjct: 44 VDCVRTSKLIQRSDPDYYLLALTLSGTSQADQEGQRARCRPGDLTFYDCSRPHEVSHHAD 103 Query: 114 ------SKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNP----- 162 + I L+P L P+ A R+ + L L NP Sbjct: 104 PAGSAYAHSIVALMPYDALPLPPRRLAPLFAGRMSGSEGVGGLVADFLIRITANPEQYHA 163 Query: 163 ALSETESEAALQAMVCLL-RPVLHQRESVQPRRERQFQ-KVVTLIDDNIREEILRPEWIA 220 A +E L + LL R ++ + E R R Q +V + ++ + L P IA Sbjct: 164 ADAERLGAVGLDLVATLLGRNLVSEDEMPTEVRRRALQAQVRAYVRQHLGDATLDPGAIA 223 Query: 221 GETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCA-DAIRHAADDEKLAGIGFHWGFSDQS 279 +SVRSL+R+F D+ VA YIR+ RL C D A D + I WGF D++ Sbjct: 224 DAHHISVRSLHRLFEDEETTVAAYIRDERLARCRRDLADPALSDRSIQVIAARWGFRDKA 283 Query: 280 HFSTVFKQRFGMTPGEYRRK 299 HFS VF+ G TP EYR + Sbjct: 284 HFSRVFRTTQGETPQEYRAR 303 >UniRef50_C7Q9A2 Transcriptional regulator, AraC family n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7Q9A2_CATAD Length = 335 Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 74/262 (28%), Positives = 125/262 (47%), Gaps = 10/262 (3%) Query: 44 LKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDAS 103 L ++ +T+ ++ RT +++ S +Y Q+ G ++M QD R + GD+ ++D + Sbjct: 52 LSIARITSQRQHVRRTTRDIDRSAYQGYYVNLQIRGSSLMTQDGRSTVLHPGDLAVVDTT 111 Query: 104 RPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPA 163 RP + +Q+ +Q+SL P+ LL A P + H LL S+ + Sbjct: 112 RPFAFDFQDDFQQLSLYAPKALLLPGSGTPVTTATRVATAAGPGAAVRHALL--SLTSGD 169 Query: 164 LSETESEAALQAMVC-LLRPVLHQRESVQP-----RRERQFQKVVTLIDDNIREEILRPE 217 LSE ++ A L A C +L L Q+ P R++R + ID+++ + L Sbjct: 170 LSE-DTAARLAAHACGILSIALDQQTEPDPRSTPLRQDRLHAAALADIDEHLTDADLSAA 228 Query: 218 WIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAADDEK-LAGIGFHWGFS 276 +A G+SVR LY +FA + A +R RRLD +R A + I GF+ Sbjct: 229 AVAARLGVSVRLLYSVFAGRRHSFASEVRRRRLDHTWRDLRDPARTHLCVIDIAVAAGFA 288 Query: 277 DQSHFSTVFKQRFGMTPGEYRR 298 D + F F++ +G TP + RR Sbjct: 289 DVTSFHRAFRREYGRTPAQVRR 310 >UniRef50_A2SJ73 Transcriptional regulator, AraC family n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SJ73_METPP Length = 368 Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 72/282 (25%), Positives = 119/282 (42%), Gaps = 11/282 (3%) Query: 20 CGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSG 79 C F + R+ G TH T G+ +R +E+ +A + ++ G Sbjct: 76 CERFPAFIRQGRFDGFRVTHL-------TSAQGGIVGTRGAREMAQDSEALYNLIYIAEG 128 Query: 80 QAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAE 139 + D+ ++ + G L D++RP + +QI+L +P+ L+ P Sbjct: 129 SICLVIDDEELTLTPGSFALWDSARPMTFITGAGLRQITLAVPQRELQLALPRAGEFVGR 188 Query: 140 RLDADLPMVQL-SHRLLQESMNNPALSETESEAALQAMVCLLRPVLH-QRESVQPRRER- 196 R A + +L L+ L + L A V LL L Q E R + Sbjct: 189 RFAATSGLSRLFVDHLISLDARFGELPRGNAGHVLHASVELLASTLSAQAEPCAGRSGKI 248 Query: 197 QFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADA 256 Q V+ ID ++ + L +A + G++ R L+R+F A +IR +RLD C Sbjct: 249 VLQGVMAYIDRHLDDPELDTRRVASDCGITERHLHRLFERADTTAAAWIRRQRLDRCRQD 308 Query: 257 IRHAADDE-KLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 +R A + I + WGF D S FS +FK+ F +P +YR Sbjct: 309 LRAAETAHLSITQIAYRWGFGDSSSFSKIFKREFASSPKDYR 350 >UniRef50_C3KC85 Putative AraC family regulatory protein n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3KC85_PSEFS Length = 320 Score = 90.9 bits (224), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 77/303 (25%), Positives = 137/303 (45%), Gaps = 18/303 (5%) Query: 9 FQQWLSQINQVCGNFTGRLLTER--YTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGS 66 + W + CG+F L R + G + H GL L+ + T+ + R Sbjct: 11 LETWTRDLRAACGHFDTELAFNRSLFIGEVSKHSRGGLSLANLRTNAGLIKRERPNADHD 70 Query: 67 DDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLL 126 D + V Q SG + Q+++ +Q+ GD+ L+D++ + + SL L R + Sbjct: 71 MDQHCFLVSQRSGYCQITQNDQVIQLAPGDMLLMDSTGSIEISPFGLIEHASLALSRHEV 130 Query: 127 EQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPAL----SETESEAALQAMVCLLRP 182 + P ++ + ++ H +L + + L S E+EA A V LL Sbjct: 131 CKQLG-GAPKTFGKISSTKACGRMLH-VLMDQLCREGLEGQDSIEEAEALQAAFVSLLGS 188 Query: 183 VLHQRE-------SVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFA 235 + S+Q R + V +ID+++ + L P +A +SVR LYR+F Sbjct: 189 AFELHDAPGDCAASLQGSNLRSY--VQKVIDESLTQPGLSPVGLANRLNISVRHLYRLFE 246 Query: 236 DKGLVVAQYIRNRRLDFCADAIRHA-ADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPG 294 ++ V +YI+ RL AD + + E + I + WGF+D +HFS FK++F ++P Sbjct: 247 EQDDSVCRYIQRARLKRSADDLTNPFLKRESITSIAYKWGFTDSAHFSRSFKKQFDLSPK 306 Query: 295 EYR 297 ++R Sbjct: 307 DFR 309 >UniRef50_B5S3I4 Probable transcription regulator sugar transport system, abc transporter permease protein n=1 Tax=Ralstonia solanacearum RepID=B5S3I4_RALSO Length = 335 Score = 90.9 bits (224), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 80/318 (25%), Positives = 130/318 (40%), Gaps = 33/318 (10%) Query: 4 AVDNEFQQWLSQI--------NQVCGN--FTGRLLTERYTGVLDTHFAKGLKLSTVTTSG 53 A N W I V G+ F+GRL ER VL HF ++ Sbjct: 11 AASNSVAYWTEVICGMQAPVQTHVIGDTPFSGRLAVERLGAVLLCHF---------RSTP 61 Query: 54 VNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQES 113 V R +E+ F L+G+AI+ QD ++V GDI L D +RP Sbjct: 62 VRYVRGQREIDRDPGDAFGASLTLTGRAIIAQDGKEVVQHPGDIVLFDTTRPFDYVLPSG 121 Query: 114 SKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAAL 173 QI L +PR LL+ P+ L + L ++L++ + + A Sbjct: 122 DDQIVLDIPRALLQSCLPNADAFLCTVLSGGSKLGGLVGQMLRDVGTDGPRAGGAGGADA 181 Query: 174 QAMVCLLRPVLH-------------QRESVQPRRERQFQKVVTLIDDNIREEILRPEWIA 220 L V+H + + P R +KV + D + + L IA Sbjct: 182 AVAARLGTTVVHLLATAFEVESDSGKSVPLPPAGPRTLEKVKAFMRDCLSDPGLDIAAIA 241 Query: 221 GETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSH 280 + +SVR+L+R+FA +G +++ +RL ++ A +++ + GF++ SH Sbjct: 242 RDNHVSVRALHRLFAAEGTTAMRWLWQQRLLAGYQSL-AAGRGHRVSEVALMCGFTNFSH 300 Query: 281 FSTVFKQRFGMTPGEYRR 298 FS F++ FGM P + R Sbjct: 301 FSRAFRRAFGMPPTDLLR 318 >UniRef50_C3VA09 Putative transcriptional regulator n=1 Tax=Pseudomonas nitroreducens RepID=C3VA09_9PSED Length = 325 Score = 90.5 bits (223), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 68/235 (28%), Positives = 114/235 (48%), Gaps = 9/235 (3%) Query: 71 FYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQES-SKQISLLLPRTLLEQY 129 + +F SG + RQV+ G I LLD +RP L + + ++ LP L ++ Sbjct: 86 YELLFVRSGSLEFKHQRRQVKATTGSIVLLDNARPYDLEMNDPVTDCFAVHLPDVWLRKW 145 Query: 130 FPHQKPICAERLDA----DLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPVLH 185 P+ K I A + A P+V L + + + L +++ +L + Sbjct: 146 IPYPKDIIASPITAVNGWGAPLVALLETISTLGLEQSPMPRGVVADQLGSLIAML--IAS 203 Query: 186 QRESVQPR-RERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQY 244 Q+E Q R R+ +K+ + D EE L PE +A + G+S R L+ +FA G ++ Sbjct: 204 QQEVRQDRHRDELLRKLKQTLADRSHEEGLTPEVVAQQNGISKRYLHLLFAQVGTTFSKV 263 Query: 245 IRNRRLDFCADAIRHAADDE-KLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRR 298 + + RLD + +R D +++ I + GF DQSHF+ FK+RF +P EYR+ Sbjct: 264 LLDIRLDKASALLRDCRYDRYQMSDIAWDCGFVDQSHFARTFKRRFLRSPLEYRK 318 >UniRef50_D2UCS7 Hypothetical hth arac/xyls-type dna-binding domain transcription regulator protein n=1 Tax=Xanthomonas albilineans RepID=D2UCS7_XANAL Length = 330 Score = 90.5 bits (223), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 57/168 (33%), Positives = 88/168 (52%), Gaps = 6/168 (3%) Query: 136 ICAERLDADLPMVQLSHRLLQESMNNPALSETESEAAL-QAMVCLLRPVLHQRESVQPRR 194 + +RL PM +L+ L++ + P L ++SE L QA+ LL + VQP+ Sbjct: 161 VALQRLCGPAPMQRLACSLIERLFSEPGLCNSDSEQFLAQALTKLLELTFKESSDVQPQL 220 Query: 195 ERQF---QKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMF-ADKGLVVAQYIRNRRL 250 E + VV ++ N+R+ L PE IA G S R++YR F G + Y+ RR+ Sbjct: 221 EPNRPSREMVVQFVERNLRDPELSPESIARALGWSKRTVYRAFKGSDGESLNSYLWRRRV 280 Query: 251 DFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRR 298 + CA +R ++ + GI + +GFS HFS +FKQ G +P YRR Sbjct: 281 EQCAQELR-GPGNQSITGIAYSFGFSSSPHFSRLFKQHMGASPLRYRR 327 >UniRef50_A0K0Q9 Transcriptional regulator, AraC family n=2 Tax=Arthrobacter RepID=A0K0Q9_ARTS2 Length = 319 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 67/259 (25%), Positives = 121/259 (46%), Gaps = 12/259 (4%) Query: 49 VTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSL 108 V+ SG ++ RT V +F QL G ++ QD R+ + GD+ + D +RP +L Sbjct: 62 VSASGHSVHRTPALVARPGQRYFKLNLQLEGTGLLIQDNREAVLRPGDLAIYDTNRPYTL 121 Query: 109 YWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPM--------VQLSHRLLQESMN 160 ++E ++ + ++ P L + + A RL + QL+ L E+++ Sbjct: 122 AFEEQARVMVVMFPHDSLSLPPDYVGQLSAVRLAGGHGLTGIVGPFIAQLAENL--EALS 179 Query: 161 NPALSETESEAALQAMVCLLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIA 220 P+ S + A L + R+S++P + V I+ N+ + L P IA Sbjct: 180 GPSGSRLAANALDLVSTMLHSELDMARDSMKP-QVLLATSVREYIEANLADPQLSPASIA 238 Query: 221 GETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHA-ADDEKLAGIGFHWGFSDQS 279 +S R L+ +F + G VA +IR++RL+ +R + + + WGF D + Sbjct: 239 AAHFISTRHLHNIFHETGTTVASWIRSQRLERIRRDLRDPLLNGTSVGAVAARWGFLDAA 298 Query: 280 HFSTVFKQRFGMTPGEYRR 298 HFS F+ +G +P ++RR Sbjct: 299 HFSRTFRDAYGESPSDWRR 317 >UniRef50_Q5YXZ9 Putative transcriptional regulator n=1 Tax=Nocardia farcinica RepID=Q5YXZ9_NOCFA Length = 334 Score = 89.4 bits (220), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 77/302 (25%), Positives = 127/302 (42%), Gaps = 6/302 (1%) Query: 2 NPAVDNEFQQWLSQINQVCGNFTGRLLTER-YTGVLDTHFAKGLKLSTVTTSGVNLSRTW 60 P F W I+ T LT + G L H L+L+ V V + R Sbjct: 9 TPPSAERFDTWQETISHAFVPLTATPLTAAGFDGTLSCHEVGSLQLNEVGGGPVRVERDP 68 Query: 61 QEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLL 120 + ++ +D + Q G+ + QD R +G GD+ + D RP +L++ + + I + Sbjct: 69 RAIRRADPGYIKLGLQTRGRGAVVQDGRTAVLGPGDLAVYDTGRPYTLHFDQPFQMIVAM 128 Query: 121 LPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAAL-QAMVCL 179 PR + I A R+ + L L+ A + + + A++ L Sbjct: 129 FPRESWQIRAAELTEITARRIGGRGGVGALLAPFLRAIPATLACGDLSRDIHIADAVLDL 188 Query: 180 LRPVLHQRESVQPRRERQ----FQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFA 235 L + + V+ R +V ID ++ + +L IA +SVR L R+F Sbjct: 189 LTAAVTEFGGVEERARSAGAGLLVQVKAFIDAHLADPMLSVPDIAAAHHISVRYLQRLFE 248 Query: 236 DKGLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGE 295 +G V +IR RRL+ + D + + WG +D SHFS +FK +GMTP + Sbjct: 249 TEGTTVTTWIRQRRLERIRRDLADPRIDRSTSAVAARWGLADASHFSKLFKAAYGMTPRQ 308 Query: 296 YR 297 YR Sbjct: 309 YR 310 >UniRef50_A9D6L8 Helix-turn-helix, AraC type n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D6L8_9RHIZ Length = 336 Score = 89.4 bits (220), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 74/273 (27%), Positives = 123/273 (45%), Gaps = 8/273 (2%) Query: 32 YTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQ 91 +TG + + + S V+ S + R +++ + D WF QL +++Q R + Sbjct: 47 FTGEIQLNRMPRVSTSIVSGSQQLVRRRRRDIAKATDEWFLLSIQLERHGLIQQCGRIAE 106 Query: 92 IGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLS 151 +G GD L + P L + +Q+ + +PR L Q P+ + + + L Sbjct: 107 LGLGDFALYSSIDPYDLSLPDGFRQLVVQIPRHDLLQRLPNADLLTGMTVRGKSEIGGLV 166 Query: 152 H----RLLQ-ESMNNPALSETESEAALQAMVCLLRPVLHQRESVQPRRE-RQFQKVVTLI 205 RL+Q +S NPA ++ + L LH E+V+ E R + T+I Sbjct: 167 RDSVFRLVQAQSAVNPATRHCLEDSIIDLCATGL-TTLHGAEAVRTATEHRLIHQADTII 225 Query: 206 DDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAA-DDE 264 I + L IA +SVR L +F +G VA IR RL A +R+ Sbjct: 226 AQRIGDPYLDRAEIAAALSVSVRRLSEVFQAEGTSVASKIRQLRLAGIASDLRNPQFAGW 285 Query: 265 KLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 ++ I WG ++ HFS +F++RFG++P EYR Sbjct: 286 TISAIAMRWGLNNLQHFSRIFRERFGVSPREYR 318 >UniRef50_D0XME9 Transcriptional regulator, AraC family n=1 Tax=Brevundimonas subvibrioides ATCC 15264 RepID=D0XME9_9CAUL Length = 317 Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 72/278 (25%), Positives = 120/278 (43%), Gaps = 17/278 (6%) Query: 38 THFAKGLKLSTVTTSGV--------NLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQ 89 +HF L +S + G+ ++ RT + + V Q G+ + + Sbjct: 37 SHFNAELSMSRLGPIGLARMAADSSSIERTRHHITVGSPRLYTFVLQTRGEGELSHCGHE 96 Query: 90 VQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQ 149 ++ AGD TL D+S P ++S+ + L +P L Y P + C + L ++ + Sbjct: 97 ARLEAGDFTLCDSSAPHFFRVNDNSEVLMLRVPAETLRVYVPSPEVFCGQLLKGNVGLTG 156 Query: 150 LSHRLL-----QESMNNPA-LSETESEAALQAMVCLLRPVLH-QRESVQPRRERQFQKVV 202 + ++ Q + P+ + + L+ M Q + R RQ +V Sbjct: 157 TAAAMIRSLASQAELGIPSPYDQRVARNLLEVMATSYALAFDDQIQGSSVVRGRQ-ACIV 215 Query: 203 TLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAA- 261 I+ N+R+ L P IA +S R L +FA V+ YI RRL+ CA I+ Sbjct: 216 RHIEANLRDPGLSPASIAAALRISPRYLRLVFATGNETVSGYILRRRLEECARQIQEPGW 275 Query: 262 DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRK 299 L + F WGF+ SHF+ F+ RFG+ P +YRR Sbjct: 276 TGHTLTEVAFSWGFNSSSHFARSFRDRFGVPPRQYRRS 313 >UniRef50_A1RDF3 Transcriptional regulator, AraC family n=1 Tax=Arthrobacter aurescens TC1 RepID=A1RDF3_ARTAT Length = 321 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 70/255 (27%), Positives = 114/255 (44%), Gaps = 11/255 (4%) Query: 55 NLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESS 114 ++SRT ++ S + QL+G+ + Q R ++G GD+ D+ + + Sbjct: 64 SVSRTARDAAASPRETYQAHVQLAGRGHIVQGGRGTELGPGDVAFYDSDAAYGVTVDDDF 123 Query: 115 KQISLLLPRTLLEQYFPHQKPICAERLDADLP-------MVQLSHRLLQESMNNPALSET 167 + L+ PR L + A RL D +VQL+ L ES + Sbjct: 124 HHLILVFPRMALGVPADGAAQLAATRLGGDGAAGLARSFLVQLARTL--ESAPGYVRTRL 181 Query: 168 ESEAALQAMVCLLRPVLHQR-ESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMS 226 A + LL + H ++ +P R R + + I+D++ E L P IA +S Sbjct: 182 VHSAVDMLGIALLEELGHSPVDTGRPSRARVHAEALAYIEDHLHEPDLAPGQIAAALFVS 241 Query: 227 VRSLYRMFADKGLVVAQYIRNRRLDFCA-DAIRHAADDEKLAGIGFHWGFSDQSHFSTVF 285 VR L+ FAD G V+ IR RRL+ CA D + L+ I G+ D +HFS +F Sbjct: 242 VRHLHAAFADTGQTVSGRIRERRLEHCARDFVDPLLAHIPLSRIAAGHGYLDMAHFSRLF 301 Query: 286 KQRFGMTPGEYRRKF 300 K +G +P ++R + Sbjct: 302 KCTYGQSPRDFRATY 316 >UniRef50_A5EI80 Transcriptional regulator, AraC family n=2 Tax=Bradyrhizobium RepID=A5EI80_BRASB Length = 335 Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 82/270 (30%), Positives = 118/270 (43%), Gaps = 27/270 (10%) Query: 50 TTSGVN--------LSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLD 101 TT +N + R+ ++ S FY +L+G+ + QD+ +V + AG + + D Sbjct: 63 TTGAINRVTFPEHVVRRSRADIAASAQRCFYLNLKLAGRCTIVQDDCEVSLSAGQVGIFD 122 Query: 102 ASRPCSLYWQE--SSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESM 159 + R +L S IS +P L P+ I RL D P V S+ Sbjct: 123 SDRTFALQHDRGPSLGVISFRVPAEALFSRLPNAPDIAPMRLSDD-PCVGALIVETARSL 181 Query: 160 NNPALSETESEAALQAMVCLLRPVLHQRESVQPRRERQ----FQKVVTL-----IDDNIR 210 N AL + A V L L S RRE F TL I + +R Sbjct: 182 NANALRLAADDTAALFDVLLDLAALGVSRSF--RREAHATTSFADATTLALRRAIHERLR 239 Query: 211 EEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRH---AADDEKLA 267 E L +A G+S R ++++ A G ++ + RRLD A +R AA D + Sbjct: 240 EPGLTVATVARMVGISERYVHKLLARAGTSFSELVMERRLDGAARDLRDPCCAARD--IG 297 Query: 268 GIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 I F WGFSD SHF+ FKQRFGM P ++R Sbjct: 298 SIAFDWGFSDLSHFTRRFKQRFGMRPRDWR 327 >UniRef50_A2SEG7 Transcriptional regulator, AraC family n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SEG7_METPP Length = 318 Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 74/281 (26%), Positives = 124/281 (44%), Gaps = 15/281 (5%) Query: 31 RYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQV 90 R+ G + L LS VT S + RT ++ + + +F Q G + QD R Sbjct: 40 RFEGEIAADALSTLTLSRVTASAQRVRRTPAKIARASEDYFLVSIQTQGCGAVVQDGRVA 99 Query: 91 QIGAGDITLLDASRPCSLYWQESSKQISLLLP----RTLLEQYFPHQKPICAERLDADLP 146 + GD L D++RP L + + +Q L+LP RT L + R A Sbjct: 100 HLSPGDFALYDSTRPYELRFDAAFQQYVLMLPGPTLRTALTDTPSLTACAVSGRRGAGHL 159 Query: 147 MVQLSHRLLQE-SMNNPALSETESEAALQAMVCLLRPVLHQRESVQPRR-ERQFQKVVTL 204 M+ + L E + P + +++ Q ++ L + R R Q+V L Sbjct: 160 MIGMIETLSAEIATLAPESAAAVADSVTQILIAGLSTLPGARPPPVSRLVALHRQQVKAL 219 Query: 205 IDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRL-----DFCADAIRH 259 + + +R+ L IA G+S +L+R +A + +A +I+ RL D CA R Sbjct: 220 VRERLRDPDLTVVRIAERLGVSPSTLHRAWAGEACSLADWIQTERLEAARRDLCAAQQRL 279 Query: 260 AADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKF 300 +++ + + WGF D +HFS F++RFG +P E R + Sbjct: 280 ----RRVSELAYSWGFKDAAHFSRAFRRRFGCSPRELRARI 316 >UniRef50_Q2IUH6 Transcriptional regulator, AraC family n=10 Tax=Alphaproteobacteria RepID=Q2IUH6_RHOP2 Length = 352 Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 66/220 (30%), Positives = 108/220 (49%), Gaps = 21/220 (9%) Query: 89 QVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLL-----EQYFPHQKPICAERLDA 143 Q IG G + L+D + P + SS + L++PR LL + P P+ + L A Sbjct: 99 QTAIGPGKVALIDLAHPIATRAFASST-VCLIVPRKLLGGLPLDTLKPRLDPLRNDLLAA 157 Query: 144 DLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPVLHQRESVQPRRERQFQKVV- 202 L R LQE + L+ET+ + V LR +L + P E++ + + Sbjct: 158 HL-------RSLQE--RSAQLTETDVADTVADTVGFLRRLLAPAQDESPAAEQRTDETIL 208 Query: 203 ----TLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIR 258 LI DN+ L P+W+A +S SLYR+FAD+G ++ +Y++ RRL A+ Sbjct: 209 ALLEALIRDNLASPDLSPDWLAQRLDVSRASLYRLFADRGGIM-RYVQERRLLAVQAALS 267 Query: 259 HAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRR 298 + +L+ + GF ++HFS F+ RFG+T +R+ Sbjct: 268 DPIETRRLSRLASDLGFKSEAHFSRSFRARFGVTASAFRK 307 >UniRef50_B9K0H9 AraC-type DNA-binding domain-containing protein n=1 Tax=Agrobacterium vitis S4 RepID=B9K0H9_AGRVS Length = 311 Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 69/278 (24%), Positives = 124/278 (44%), Gaps = 15/278 (5%) Query: 30 ERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQ 89 +R+ G + + + ++T+++S + R ++ ++ Q+ GQ M Q R+ Sbjct: 37 QRFKGEVKANLLDCINVTTISSSRQKIHRRRLDISRMPHEVYFLNLQVKGQCRMMQGSRE 96 Query: 90 VQIGAGDITLLDASRP-----CSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDAD 144 + GD +L+D++ P CS W Q S +PR +L+ A R + Sbjct: 97 ALLEPGDFSLVDSTEPYLNDYCSDDW----TQYSFRIPRAMLKPLLKQADKQTAIRFTSA 152 Query: 145 LPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPVLHQRESVQPR-----RERQFQ 199 P+ ++ L+ N T S +V L+ + + R R + + Sbjct: 153 HPIASVAIDYLKSVAQNAEHIGTASTPIANHIVDLVAMAAGVSTTEEDRARGTLRSQLSR 212 Query: 200 KVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRH 259 V+ I + + L P A +SVR ++R+ + G ++ + RRL+ CAD +R Sbjct: 213 SVIQFIGAHAADPTLTPAKAAQHFKISVRYVHRLLEESGETFSRLLLKRRLERCADDLR- 271 Query: 260 AADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 A ++ I F WGF+D SHFS F+ FG+ P +YR Sbjct: 272 AEAAISISEIAFRWGFNDLSHFSKTFRHHFGVAPRDYR 309 >UniRef50_B1JB60 Transcriptional regulator, AraC family n=1 Tax=Pseudomonas putida W619 RepID=B1JB60_PSEPW Length = 389 Score = 87.8 bits (216), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 74/244 (30%), Positives = 109/244 (44%), Gaps = 19/244 (7%) Query: 67 DDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLL 126 D+ + LSG+ M Q Q I AGD+ + + R E + +SL++P LL Sbjct: 83 DELYIALQLHLSGRVRMRQWGEQ--ICAGDMFVWRSDRRQDYEVLERACSVSLMIPWQLL 140 Query: 127 EQYFPHQK-PICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPVLH 185 +Y P +K P A R+D + L R L LSE A L R V+ Sbjct: 141 REYLPGRKQPPSACRIDTRTGVGSLLSRHLV------GLSEEIDAVPPSAHFTLCRTVIG 194 Query: 186 QRESVQPR---------RERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFAD 236 + P + ++V++ I ++ E+ L P IA G+SVR L+ +FA Sbjct: 195 LLDIALPEPPCASKLTAKNALRERVLSYIAQHLHEDNLIPTRIAAAQGISVRYLHALFAQ 254 Query: 237 KGLVVAQYIRNRRLDFCADAIRHAADDE-KLAGIGFHWGFSDQSHFSTVFKQRFGMTPGE 295 V +I RL C + A +++ I F WGF+ SHF FKQ FGM+P E Sbjct: 255 SDTTVVGHILESRLYACRQTLADPACKHLQISEIAFRWGFNSTSHFCRTFKQFFGMSPSE 314 Query: 296 YRRK 299 RR+ Sbjct: 315 LRRR 318 >UniRef50_Q13VV6 Transcriptional regulator, AraC family n=2 Tax=Proteobacteria RepID=Q13VV6_BURXL Length = 305 Score = 87.8 bits (216), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 69/259 (26%), Positives = 116/259 (44%), Gaps = 6/259 (2%) Query: 45 KLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASR 104 +L+ V S ++RT ++ S D F + + Q R VQ+ L D++ Sbjct: 42 ELTVVRASPQRVARTSALIRLSSDECLMFGFAPKARWKVSQHGRTVQVAPMQFVLYDSNY 101 Query: 105 PCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPAL 164 P L + E L LP L + DA +L L++E + Sbjct: 102 PFELEFDEDFDLHVLQLPHASLAFAGSRLSDVAGRPFDAVSGAGKLLASLIEEVRSGHTS 161 Query: 165 SETESEAALQAMVC-----LLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWI 219 S + +L ++ ++ +L R RE + +V + I+ N+ L P I Sbjct: 162 SGVIARTSLGSVAVHLATSMVSELLELRTDEANERELRLLRVKSYIELNLANPRLDPHAI 221 Query: 220 AGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAADDE-KLAGIGFHWGFSDQ 278 A GMSVR+L+ +F+ + L V+ Y+ +RRL C + + +A +AGI WGF + Sbjct: 222 ASANGMSVRTLHGLFSAEELGVSTYVTHRRLLRCKEDLGNAMHSSLSVAGIAMRWGFWNN 281 Query: 279 SHFSTVFKQRFGMTPGEYR 297 ++FS FK+ FG++P YR Sbjct: 282 AYFSRAFKRMFGISPRSYR 300 >UniRef50_B8GZF8 Transcriptional regulator, AraC family n=2 Tax=Caulobacter vibrioides RepID=B8GZF8_CAUCN Length = 312 Score = 87.8 bits (216), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 72/299 (24%), Positives = 121/299 (40%), Gaps = 15/299 (5%) Query: 9 FQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSR---TWQEVKG 65 W + + N E + G +D G+ L+ V +S + R +W Sbjct: 17 LDAWNALVASTFDNLVVDADREAFEGSIDVRDLGGMDLARVASSAAVVRRGRASWTRRP- 75 Query: 66 SDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTL 125 +F Q G+++ QD R+ + GD+ L D +RP ++ + + ++ + L +P Sbjct: 76 ----YFKLHLQDVGRSLNSQDGREAVLDEGDLMLCDPARPYTIRFDDPNRMLVLRIPSER 131 Query: 126 LEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPVLH 185 L + +C RL D L ++ N A+Q L Sbjct: 132 LADRMDDPEALCGRRLAGDSLAGALLTSFIRTLWTNAGRGCAPVGEAVQDAALSLLSAAA 191 Query: 186 QR---ESVQPR----RERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKG 238 + E+ PR ++ IDDN+ + L +AG G+S R + +FA Sbjct: 192 REGEGEAPAPRDLDASHGAGARIKRFIDDNLCDPELSVGRVAGALGVSPRYVQMVFAGMA 251 Query: 239 LVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 YIR +RL+ A A+R + + F GF+D SHFS FK +G+ P E+R Sbjct: 252 TTPLAYIRRKRLERAARALREDGVGCNITDLSFGLGFNDLSHFSRAFKAFYGVGPREFR 310 >UniRef50_C4KLX3 AraC family regulatory protein n=30 Tax=pseudomallei group RepID=C4KLX3_BURPS Length = 319 Score = 87.4 bits (215), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 73/245 (29%), Positives = 121/245 (49%), Gaps = 16/245 (6%) Query: 65 GSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRT 124 GSD +F + QLSG + +EQ + ++ +GD +L D P S+ +Q+++ +PR Sbjct: 77 GSD--FFKLILQLSGVSEIEQRGKTFRLHSGDWSLYDPRVPYSIANLTHVEQLAIQIPRK 134 Query: 125 LLEQY-FP--HQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLR 181 L + P H + L ++ L E + P+L T A + ++ L+ Sbjct: 135 QLGGFAVPDLHTSDVREFELKGLFSLLSSFLVSLSEQL--PSLPGTTGTALSETILGLIV 192 Query: 182 PVLHQRESVQ------PRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFA 235 L + Q P R +V I ++ + L + IA E S R L+R+F Sbjct: 193 STLTAQRDAQGEHVALPAVLR--MRVKQYIHGHLADADLSIDRIARELRCSKRYLHRIFE 250 Query: 236 DKGLVVAQYIRNRRLDFCADAIRHA-ADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPG 294 ++G+ + +YI + RL+ C DA+ +A A ++ I F WGFS +HF FKQR+GMTP Sbjct: 251 EEGVTIDRYIWSSRLERCKDALDNARAAKPAISEIAFSWGFSSSAHFCRSFKQRYGMTPR 310 Query: 295 EYRRK 299 E+ R+ Sbjct: 311 EFVRR 315 >UniRef50_B1M073 Transcriptional regulator, AraC family n=3 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1M073_METRJ Length = 328 Score = 87.4 bits (215), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 82/307 (26%), Positives = 137/307 (44%), Gaps = 26/307 (8%) Query: 7 NEFQQWLSQINQVC----------GNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNL 56 N F+QW + + F G + V +HFA S T Sbjct: 14 NAFRQWREMVCEQLVPVELKTVDEAQFKGSIAATNIGAVPISHFAHTAMRSETTADAA-- 71 Query: 57 SRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQ 116 + SD A Y V LSG+AI Q +++ + GD+ +LDA RP ++ E+S Sbjct: 72 ----RRDDRSDRA--YAVLMLSGRAIARQGDQEAECQMGDLFVLDA-RP-AVVQTETSST 123 Query: 117 ISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAM 176 + L LPR LE + A R+ AD L+ +Q+ + ++ A L ++ Sbjct: 124 LILDLPRDRLETALGPSRLFSALRVGADHASTTLARTYIQDLVAVADRLGPDAAARLASI 183 Query: 177 -VCLLRPVLHQRESVQ-PRR---ERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLY 231 + L+ L +R + + PR Q+ ++ ++ + L P +A G+S+R L Sbjct: 184 GIDLIVASLAERMAQEVPRSIHGNVTVQRAKAYVETHLGDPSLDPPQLAAAMGLSLRRLQ 243 Query: 232 RMFADKGLVVAQYIRNRRLDFCADAIRHAADDEKLAG-IGFHWGFSDQSHFSTVFKQRFG 290 +F ++G ++ YI RRL+ A + A G + + GFS Q+HF+ FK R+ Sbjct: 244 ELFHERGRHISDYIWERRLEVAAKRLTDPACAHLSVGMLAYACGFSSQAHFARRFKDRYD 303 Query: 291 MTPGEYR 297 ++P EYR Sbjct: 304 VSPREYR 310 >UniRef50_B4UYA5 AraC family regulatory protein n=1 Tax=Streptomyces sp. Mg1 RepID=B4UYA5_9ACTO Length = 330 Score = 87.0 bits (214), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 77/308 (25%), Positives = 137/308 (44%), Gaps = 15/308 (4%) Query: 5 VDNEFQQWLSQINQVCGNFTGRLLTER--YTGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 ++ F+ W ++Q G T +R + G ++ +++T++ +G+ RT + Sbjct: 13 TEDRFEWWREVVSQGAGA-TDVTSEDRAGFAGSMEVLSLGAARIATLSYAGLRSQRTARL 71 Query: 63 VKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRP----CSLYWQESSKQIS 118 ++ SD + L G + Q ++ + GD + +S P + S++ + Sbjct: 72 IRRSDPETYELTLLLGGTMGVSQARQETLLRPGDFNVWSSSLPYDSQSAGEPDGSARAVV 131 Query: 119 LLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVC 178 L LPR+ L + A L + + + R L + + E L M Sbjct: 132 LHLPRSFLPLPGAKVDRLLAHGLPSGSGVAAVFARHLTSVVREAQSLTSVDEERLGVMTW 191 Query: 179 LLRP--VLHQRESV-----QPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLY 231 L V H ++ R + +++ I+DN+ + L P IA +SVR L+ Sbjct: 192 DLATAFVAHHVDAADRLPPHTRHQLLLKRLDLFIEDNLADPALSPRQIADRHHISVRLLH 251 Query: 232 RMFADKGLVVAQYIRNRRLDFC-ADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFG 290 R+FAD+ V+Q IR RRL+ C AD + + +G WGF+D + FS F+ +G Sbjct: 252 RLFADRKETVSQTIRRRRLERCSADLVDPRLRALPVHEVGRRWGFTDAAGFSRTFRGAYG 311 Query: 291 MTPGEYRR 298 TPGE+RR Sbjct: 312 WTPGEHRR 319 >UniRef50_B6YYX2 Transcriptional regulator, AraC family n=1 Tax=Pseudovibrio sp. JE062 RepID=B6YYX2_9RHOB Length = 322 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 72/300 (24%), Positives = 141/300 (47%), Gaps = 7/300 (2%) Query: 8 EFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSD 67 E +W +++ ++CG+F T TG + + VT + ++R ++ Sbjct: 14 ELDEWNTRLTEICGHFVTNTETGSVTGNASLLHLGDVDCARVTHNAREITRGPSDISKDG 73 Query: 68 DAWFYTVFQLSGQAIMEQDERQVQIGA-GDITLLDASRPCSLYWQE--SSKQISLLLPRT 124 +A+++ + QL G+A +EQ+ + + + GD+TL+D+ + S QIS+ +PR Sbjct: 74 EAYYFLILQLRGEAELEQNGQTALLSSPGDMTLIDSVKSSVFRANRELGSDQISIHIPRH 133 Query: 125 LLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPVL 184 LL + F + C ++ A QL + L ++ S+ + + + L Sbjct: 134 LLHKQF-NSTYACGRKISAVSGAGQLINAHLNILLSAQPGSQKQHLLSGAFHDVVSATFL 192 Query: 185 HQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQY 244 + S + Q +++LI DN EE + ++ + MS S+YR+F + GL + Sbjct: 193 DEDTSTLQEGYDKLQLLLSLIHDNALEENFNIDELSKLSSMSRSSIYRLFREHGLSCNEQ 252 Query: 245 IRNRRLD-FCADAIR--HAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKFR 301 I R+ F + R H+ D +++ + F +GF D S F+ F+ + GM+P + + R Sbjct: 253 IAKVRVGRFKRELSRRLHSRQDFRISQLAFEFGFRDLSTFNRAFRAQVGMSPRNFAEQIR 312 >UniRef50_C8NQI1 AraC-type transcriptional regulator n=4 Tax=Corynebacterium RepID=C8NQI1_COREF Length = 335 Score = 85.9 bits (211), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 65/265 (24%), Positives = 114/265 (43%), Gaps = 12/265 (4%) Query: 44 LKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDAS 103 ++L+ V + + R+ + + + F G + V + G L DA Sbjct: 66 MRLARVFGTSQIVERSEKFINDNPTGMMAIFFATEGDSFFFDRGGHVSLRPGQALLYDAD 125 Query: 104 RPCSLYWQESSKQISLLLPRTLLEQYFPHQK---PICAERLDADLPMVQLSHRLLQESMN 160 +P + ++ L + + P P+ E P Q RL++ +++ Sbjct: 126 QPFLRGFNHGFRENVLTISKERFRDVAPRSGLKLPMVFEFGPGGSPAEQALGRLVKTTLH 185 Query: 161 NPALSETES-----EAALQAMVCLLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILR 215 L+ S ++ LL P+L + + F + ID ++ L Sbjct: 186 RLQLTHVTSTDLPLPGGEDKVISLLGPILGSSPNTE---ASLFSLARSYIDLHLTNRHLT 242 Query: 216 PEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAADDE-KLAGIGFHWG 274 P+ IA G+S R L R+F+ +G V +YI NRRL F +A+ D ++ IGF +G Sbjct: 243 PQEIAAAAGVSERHLSRIFSAEGTTVGRYILNRRLTFAHEALTSGQQDALPVSEIGFRYG 302 Query: 275 FSDQSHFSTVFKQRFGMTPGEYRRK 299 F+ SHF +++RFGMTP + RR+ Sbjct: 303 FASPSHFGRTYRERFGMTPLQARRE 327 >UniRef50_C6X6W8 Transcriptional regulator, AraC family n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X6W8_METSD Length = 337 Score = 85.9 bits (211), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 68/265 (25%), Positives = 128/265 (48%), Gaps = 8/265 (3%) Query: 36 LDTHFAKGLKLSTVTTSGVNLSRTWQE-VKGSDDAWFYTVFQLSGQAIMEQDERQVQIGA 94 +D + K L+LS + ++ + L R QE + S DA+F V LSG+ ++EQ R+V + Sbjct: 58 MDIYTWKQLRLSCIRSNAIKLKRLPQEPLLSSQDAYFGVVL-LSGEYMLEQAGREVFLSP 116 Query: 95 GDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRL 154 GD+T+ DA+RP + S ++ + +PR L+ Q + A ++ + ++ Sbjct: 117 GDMTIYDATRPHRITCPGSFSKLIVSIPRELMRQKLAGVEHCTAMKIPGSKGIGAVAADF 176 Query: 155 LQESMNNP-ALSETE----SEAALQAMVCLLRPVLHQRESVQPRRERQFQKVVTLIDDNI 209 ++ S + +S+ S+ AL L+ + + R + ++ ++ Sbjct: 177 MRASASQATGMSQLAFDALSDNALDLFTLALQEIRPPTSQLSRSRSLSLYNIKACVEKHL 236 Query: 210 REEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAADDE-KLAG 268 L + IA TG+S R + + A + + +++ RRL+ I A ++ Sbjct: 237 AHPQLDSQMIAQATGLSSRYINELLAAEETSLMRHVWERRLEKTHQDILGACQTGLAVSD 296 Query: 269 IGFHWGFSDQSHFSTVFKQRFGMTP 293 I WGF+D SHFS FK++FG++P Sbjct: 297 IAMKWGFNDLSHFSRAFKRKFGLSP 321 >UniRef50_UPI0001B4F487 putative transcriptional regulator n=1 Tax=Streptomyces hygroscopicus ATCC 53653 RepID=UPI0001B4F487 Length = 301 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 68/245 (27%), Positives = 113/245 (46%), Gaps = 21/245 (8%) Query: 75 FQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLL---EQYFP 131 Q SG + + QD R + G + DAS P +L E+ + L++PR L E P Sbjct: 4 LQESGTSTVHQDGRTESLLPGALAFYDASHPFTLVMPEAYRAKVLVMPRRALGLSEAELP 63 Query: 132 H--QKPICAERLDADLPMVQLSHRLLQESMNNP------------ALSETESEAALQAMV 177 H +PI + + + ++ + RL + +P L T + L + Sbjct: 64 HLIARPIQPDTALSAM-LLPIISRLADGAGPHPWPIRRQIARTLLDLLATLATGVLDTLD 122 Query: 178 CLLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADK 237 L + R + R +V I+ ++ + L PE IA G+SVR L+++F + Sbjct: 123 TLGTGDMEDRRAGADRA--HLARVHAFINKHLADSGLSPETIARHHGISVRYLHKLFQEH 180 Query: 238 GLVVAQYIRNRRLDFCADAI-RHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEY 296 G V ++IR RRL+ C + R +A + HWGF +HFS VF+ +GM+P E+ Sbjct: 181 GTTVGRWIRQRRLEECRKELARGGRSSRTVAAVAQHWGFISPAHFSRVFRAAYGMSPREW 240 Query: 297 RRKFR 301 + +R Sbjct: 241 QALWR 245 >UniRef50_C4WLC6 Helix-turn-helix domain-containing protein n=1 Tax=Ochrobactrum intermedium LMG 3301 RepID=C4WLC6_9RHIZ Length = 370 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 83/289 (28%), Positives = 130/289 (44%), Gaps = 17/289 (5%) Query: 19 VCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLS 78 + G+ +GRL G + + G L++VT + +R + + S F Sbjct: 53 IPGSKSGRL-----EGAIRSREIAGFTLASVTFNSQRYNRDRRIIAWSGLDQFLVAVVKG 107 Query: 79 GQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICA 138 G+ + + + +GDI +LD ++ + +S L+PR +L + H + Sbjct: 108 GEILGDAANNSLTARSGDICILDLTQVLQ-SDVTAGGTLSTLIPRGILAKATGHAN-LHG 165 Query: 139 ERLDADLPMVQLSHRLLQESMNNPA--LSETESEAALQAMVCLLRPVLHQR-----ESVQ 191 L A LPM QL L E +N + LS E A +++V +L L E ++ Sbjct: 166 VVLQAHLPMTQLITAYL-EGLNGLSEHLSNDEIVAVQESLVTILAAALQGLRATGIEELR 224 Query: 192 PRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLD 251 P Q+V+ +D N+ L + I +S LYR FA+ G +A IR+RRLD Sbjct: 225 PLSIALRQRVLDYVDRNLNNPELSLDLIIRRFNVSRAHLYRAFAEDG-GIAGVIRDRRLD 283 Query: 252 FCADAIRHA-ADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRK 299 I +A I F GFS SHFS F++RFG+ PGE RR+ Sbjct: 284 AAFLEITQTDMIPRSIAKIAFEHGFSSASHFSRSFRERFGLMPGEARRE 332 >UniRef50_B2IIE7 Transcriptional regulator, AraC family n=1 Tax=Beijerinckia indica subsp. indica ATCC 9039 RepID=B2IIE7_BEII9 Length = 316 Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 73/295 (24%), Positives = 128/295 (43%), Gaps = 10/295 (3%) Query: 7 NEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFA-KGLKLSTVTTSG--VNLSRTWQEV 63 + W + +CG ++ + + GL+L + TSG V L R+W + Sbjct: 17 HSINYWEEALAALCGRLQVEIVGDDRIDAFANYVDFDGLRLCQIKTSGHRVALPRSW--L 74 Query: 64 KGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPR 123 S+ FQ G +I EQ + ++ + GD D ++P + E ++ ++P+ Sbjct: 75 GQSEHPVVKVHFQTKGTSIFEQGQTRIVLSPGDCLAYDVAQPHLISSLEYTEHEVAIIPK 134 Query: 124 TLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPA-LSETESEAALQAMV-CLLR 181 L + + A + + ++ L ++ + LS + A++ L+ Sbjct: 135 KSLMERRIAARQFPAVHMSTEHGDIRFVRNFLLSALRQASTLSNKSIKPIADALLDVLII 194 Query: 182 PVLHQRES--VQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGL 239 P+ R RRE + I N+ + L + IA G S R L+ +F D+G+ Sbjct: 195 PLSEGRPQGVSSDRRETLRIRAQDYIRQNLGDTDLTIDRIARALGCSKRYLHMIFMDEGI 254 Query: 240 VVAQYIRNRRLDFCADAIRHAADDEK-LAGIGFHWGFSDQSHFSTVFKQRFGMTP 293 V+++I N RLD C ++ A K + + WGFS SHFS FK R+G TP Sbjct: 255 TVSRFIWNERLDRCFYDLKDAHQSNKTITEVAIEWGFSSPSHFSRSFKDRYGFTP 309 >UniRef50_C5AL79 Putative uncharacterized protein n=1 Tax=Burkholderia glumae BGR1 RepID=C5AL79_BURGB Length = 305 Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 73/309 (23%), Positives = 140/309 (45%), Gaps = 22/309 (7%) Query: 1 MNPAVDNEFQQWLSQINQVCGNFTGRLL--TERYTGVLDTHFAKGLKLSTVTTSGVNLSR 58 M P F +W ++ +CG F R + + G + GL+++ + T+ ++ R Sbjct: 1 MTPQAAARFARWSDEVLAICGRFQIRPPEHADLFLGDIRRRSLGGLEIADIRTNAGSIRR 60 Query: 59 TWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQIS 118 + DD + + V Q G + ++ + AG++ LLD+++ + Q Q+S Sbjct: 61 QPRRAGSLDDRYCFLVLQREGAVRVGGEQAGFVLEAGEMALLDSAQSFEMRPQGLLHQMS 120 Query: 119 LLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESM-------NNPALSETESEA 171 + LPR + L LS +LL++ + ++ +++ E A Sbjct: 121 VHLPREAFDTVARAGNGF------GKLSRRGLSGQLLRDMLLRLTVPADDGDVTQDEGAA 174 Query: 172 ALQAMVCLLRPVL--HQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRS 229 +A+ L R L P R R ++++ N+++E +A + G+S R Sbjct: 175 LREALGALSRGALCGEPPGGDAPLRLRAQRQILM----NLQDEDQSVARLARQLGVSPRQ 230 Query: 230 LYRMFADKGLVVAQYIRNRRLDF-CADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQR 288 ++R+F G V ++I R++ C D +R D + I WGF D +HFS VF+++ Sbjct: 231 VHRLFEGAGESVGRHIMRMRIEASCRDLLRTELRDWTITSIAQKWGFGDAAHFSRVFRRQ 290 Query: 289 FGMTPGEYR 297 G++P E+R Sbjct: 291 TGVSPREFR 299 >UniRef50_B7L1S2 Transcriptional regulator, AraC family n=1 Tax=Methylobacterium chloromethanicum CM4 RepID=B7L1S2_METC4 Length = 261 Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 69/252 (27%), Positives = 115/252 (45%), Gaps = 6/252 (2%) Query: 54 VNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQES 113 + +SRT + + + Q SG+ ++EQD QV + GD+TLLD + P + ++ Sbjct: 1 MTVSRTRRHIASDATDGIFVCRQFSGRLVLEQDGYQVGLEPGDVTLLDPAVPYAAHFFGG 60 Query: 114 SKQISLLLPRTLLEQYFPHQKPICAERL--DADLPMVQLSHRLLQESMNNPALSETES-E 170 S+ + + R LE + + A L +AD + LL N + + S E Sbjct: 61 SELLVFKVRRNALEGRVGRTRALTARALPANADGRLTSAYLGLLPFHANGLSAAVGASVE 120 Query: 171 AALQAMVCLL--RPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVR 228 L ++ L R + R +V ++ N+ + +A G+S+R Sbjct: 121 PQLLDLIALSFSRALAGTAARGSSARSLARTRVRAAVEANLCDRSFGVAAVAQAAGVSIR 180 Query: 229 SLYRMFADKGLVVAQYIRNRRLDFCADAIRHAAD-DEKLAGIGFHWGFSDQSHFSTVFKQ 287 + AD+ + Q ++ RRL+ C A+ A D K++ I + WGFSD SHF F+ Sbjct: 181 YANAVLADESTSIMQLLQTRRLERCRQALADPAQADRKVSEIAYGWGFSDMSHFGRRFRA 240 Query: 288 RFGMTPGEYRRK 299 FGM P E+RR Sbjct: 241 LFGMLPSEFRRS 252 >UniRef50_B1LSW4 Transcriptional regulator, AraC family n=2 Tax=Alphaproteobacteria RepID=B1LSW4_METRJ Length = 319 Score = 84.7 bits (208), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 77/294 (26%), Positives = 128/294 (43%), Gaps = 6/294 (2%) Query: 9 FQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDD 68 F+ W G+ R ER++ + + G L+ +S V L + V + Sbjct: 23 FEFWRCTALARFGDIGRRHPRERFSAKRLSVASAGWSLTHTVSSPVELEFRSRHVDRNAR 82 Query: 69 AWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQ 128 A L G EQ R Q+ GDI+ L +RP Q + ++I L +PR + E Sbjct: 83 AMVVIGLGLDGVGYHEQHGRGAQLNPGDISFLTRNRPFVAGTQSAYEEIRLAVPREMFEA 142 Query: 129 YFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPVLHQRE 188 + L ++ RL + + +S E++AA++ ++ LL ++ Sbjct: 143 WIGAADAFAGRSLGPQPAGAEVRARLRGVAGSIAWMSADEAQAAVEGVLHLLGHLVDGAA 202 Query: 189 SVQPRRERQFQKVVTLIDDNIREEI----LRPEWIAGETGMSVRSLYRMFADKGLVVAQY 244 VV+L +I + L P+ I G+S SLYR FA+ G + A Sbjct: 203 RRGDPEAVSQAAVVSLARAHIARRMHDPDLNPQDIQRALGLSRTSLYRAFAETGGIAAA- 261 Query: 245 IRNRRLDFCADAIRHAADDE-KLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 IR+ RLD + DD+ ++A I + GF+D F+ F++RFG+ PG+ R Sbjct: 262 IRDARLDLARRRLEARRDDKVRIASIAYACGFTDVPTFNRGFRKRFGLAPGDLR 315 >UniRef50_Q82RS6 Putative regulatory protein n=1 Tax=Streptomyces avermitilis RepID=Q82RS6_STRAW Length = 358 Score = 84.7 bits (208), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 77/275 (28%), Positives = 123/275 (44%), Gaps = 22/275 (8%) Query: 40 FAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITL 99 +G+ +S+V + R+ + ++ SD + + G EQ QV GD+ L Sbjct: 75 LGEGIGVSSVAFPAMQSIRSRRLIRRSDPELWVLALVVKGAMQREQGRNQVNPRPGDLVL 134 Query: 100 LDASRP--CSLYWQESSKQISLLLPRTLLEQYFPHQ--KPICAERLDADLPMVQLSHRLL 155 D+S+P S+ + ++ I L LPR + P Q + + A L + + L +LL Sbjct: 135 YDSSQPYWASIATDDVAQSIVLHLPRRTVP--VPEQALRRMVATALPSRTGIGALLSQLL 192 Query: 156 QESMN-NPALSETESEAALQAMVCLLRPVL------HQRESVQPRRERQFQKVVTLIDDN 208 + P L ++ A+V L L ++ RR Q ++ + I Sbjct: 193 GGLVEQGPKLEAGQTGRVASAVVDLTTAFLAGLSGADGPQTTAARRVAQLHQIKSFIRSR 252 Query: 209 IREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAADDEKLAG 268 + E L P +A +S+R+L +F + G V +IR +RL+ C R D +LAG Sbjct: 253 LGEPGLTPTAVAAAHHISLRALQYLFREDGRTVGAFIREQRLERC----RAGLADPRLAG 308 Query: 269 -----IGFHWGFSDQSHFSTVFKQRFGMTPGEYRR 298 I GF D + FS FK R+GM PGEYRR Sbjct: 309 HSVAAIAVRAGFCDAAAFSRAFKARYGMPPGEYRR 343 >UniRef50_B6R2R9 Transcriptional regulator, AraC family n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R2R9_9RHOB Length = 356 Score = 84.3 bits (207), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 86/309 (27%), Positives = 136/309 (44%), Gaps = 24/309 (7%) Query: 4 AVDNEFQQWLSQIN---QVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTW 60 A D F W I+ QV + R T+ +T +D H + L+ + R+ Sbjct: 30 APDERFSLWKESISFMFQVEADHAVR--TDDFTAEVDAHMFGQIVLARTKSRKQFWERS- 86 Query: 61 QEVKGSDDAWFYTVFQL--SGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQIS 118 E+ + D + + QL +G E D Q + + + D +R S W + +S Sbjct: 87 -ELTIARDGMDHFMIQLFETGDMFYEHDGAQHSVAQDGLIIFDLAR-TSKSWTNTFSNLS 144 Query: 119 LLLPRTLLEQYFPHQKPICAERLDADLPMVQL--SH-RLLQESMNNPALSET-ESEAALQ 174 L++PR LLE + RL A PMVQL SH + L+E + +LS+ + A Sbjct: 145 LIIPRELLEPKLVYPDGQHMRRLPASQPMVQLLYSHIKTLKELSDQLSLSQAADVNPATL 204 Query: 175 AMV--CLLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYR 232 ++V CL S Q I++N+ L PE +A + G+S LY Sbjct: 205 SLVAACLNSTADGVVISDANSHAAQIMLAKRAINENLSNPALTPEVVASKAGISRSKLYE 264 Query: 233 MFAD----KGLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQR 288 MF K V+ Q ++ + +++ H ++ E I F +GF+ +S FS FK+R Sbjct: 265 MFRSYGGVKSFVLEQRLKGAMMALISNSNAHRSNAE----IAFSFGFAYESTFSRAFKKR 320 Query: 289 FGMTPGEYR 297 F MTP E R Sbjct: 321 FSMTPTEAR 329 >UniRef50_B9JQ03 AraC-type DNA-binding domain-containing protein n=3 Tax=Agrobacterium radiobacter K84 RepID=B9JQ03_AGRRK Length = 302 Score = 84.3 bits (207), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 74/291 (25%), Positives = 123/291 (42%), Gaps = 8/291 (2%) Query: 12 WLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWF 71 W Q+ + T+ + G + LS V ++ RT + ++ Sbjct: 11 WKEQLWSTYVRLESKAETDGFYGAVQEFLPHSHSLSLVDSTAQLTERTRRHIRADQQEVV 70 Query: 72 YTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFP 131 FQLSG ++ QDERQ + G+ L ++ RP SL + KQ+ L + R + P Sbjct: 71 LVAFQLSGCGLVVQDERQARTAPGEFVLYESMRPYSLGFDGPFKQLVLRVDRERMISTMP 130 Query: 132 HQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQ--AMVCLLRPVLHQRES 189 + A DA ++ LQ + + S + ++ A + VL Sbjct: 131 CIGNMTARTFDAKQGAGAVALDFLQSLAARGSQIDEGSLSPMERTAFDLVATGVLSSTGD 190 Query: 190 VQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRR 249 + PRR F+++ + + +R+ +A GMS RSL R+ A+ G+ I R Sbjct: 191 LSPRRV-LFERLRDRLIEKVRDPSFNQTDMAVLAGMSPRSLRRLCAENGISPGGLILRTR 249 Query: 250 LDFCADAIRHAADDEK---LAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 L D+ A D K + I WGF+D S+F+ F+ +GMTP + R Sbjct: 250 LQGATDSF--ALDINKRRSVTEIALSWGFNDISYFNRAFRTTYGMTPRQMR 298 >UniRef50_C9NAR3 Transcriptional regulator, AraC family n=3 Tax=Streptomyces RepID=C9NAR3_9ACTO Length = 322 Score = 84.3 bits (207), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 65/273 (23%), Positives = 125/273 (45%), Gaps = 9/273 (3%) Query: 36 LDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAG 95 LDT A L + + + + + RT + + ++ + Q+SG +++ Q+ RQ + G Sbjct: 47 LDT--AGPLGICSARATSMTIRRTPRLAREDEEPAVFLGLQVSGTSMVVQNGRQALLRPG 104 Query: 96 DITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLL 155 D+ L D P +L + E + PR L + + A L P+ L+ Sbjct: 105 DLALYDTVSPYTLLFDEGVDHHFVRFPRAALALPERALRDVTAVTLGPGNPVAGLASTYF 164 Query: 156 QESMNNPAL-SETESEAALQAMVCLLRPVLHQRESVQPRRERQFQKVVTL-----IDDNI 209 + + + L S ++A + + L+R V+ + Q + ++L + ++ Sbjct: 165 SQLVVSAGLRSGPHADAVAEPSIELVRAVVATQLGSQDLARAPMEATLSLRIRRYMRAHL 224 Query: 210 REEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHA-ADDEKLAG 268 + L IA +SVR LY + A G+ + +IR+ RL+ C + +A Sbjct: 225 ADSDLSAARIAAAHDISVRHLYTVLARSGISLGDWIRSHRLEECKRELAGPQGRSRTIAA 284 Query: 269 IGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKFR 301 +G WGF D +HFS VF++ +G++P ++R + R Sbjct: 285 VGRSWGFVDATHFSKVFRKAYGVSPRDWREENR 317 >UniRef50_C3PKW7 Transcription regulator, AraC family n=2 Tax=Corynebacterium RepID=C3PKW7_CORA7 Length = 306 Score = 83.6 bits (205), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 65/237 (27%), Positives = 111/237 (46%), Gaps = 25/237 (10%) Query: 75 FQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQK 134 Q++G + M QD R ++ GD+ L RP +L++ E + + P++ L+ Sbjct: 76 LQITGSSTMSQDGRTCELRPGDLALYVTQRPYTLHYPEEQNTLIVHFPQSFLDI-----S 130 Query: 135 PICAERLDADLPMVQLSHRL----------LQESMNNPALSETESEAALQAMVCLLRPVL 184 P +RL A+ + SH L L E+++ L + A +++ + +L VL Sbjct: 131 PAQIQRLTAN--PISRSHGLGAVAVPLFEQLAENLD--LLKGPHATALVRSALTMLVSVL 186 Query: 185 HQRESVQPRRERQ-FQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQ 243 + +P F + I+ ++ + L P IA +SVR L+ F+++GL V Sbjct: 187 ASDVADEPSAGTLLFNQATAYIEQHLGDSDLGPSTIAQALFVSVRHLHAKFSEQGLSVGS 246 Query: 244 YIRNRRLDFCADAI---RHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 YIR RRL+ + RH+ +E ++ I +G D SH S +FK F P YR Sbjct: 247 YIRTRRLEHIRRELVDPRHS--EESISHISARYGLHDPSHLSRIFKAEFHKPPSAYR 301 >UniRef50_A5EKU9 Transcriptional regulator, AraC family n=2 Tax=Bradyrhizobium RepID=A5EKU9_BRASB Length = 318 Score = 83.6 bits (205), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 70/269 (26%), Positives = 116/269 (43%), Gaps = 8/269 (2%) Query: 38 THFAKGLKL-STVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGD 96 TH A G + S V + + RT Q + +D + G + QD R I G+ Sbjct: 45 THTALGRAVCSEVASDRQRVHRTSQRIARADADYVLIALGREGIGGVVQDGRDTVIRPGE 104 Query: 97 ITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQ 156 + D +RP L + + +Q LPR +L++ + + A AD P+ L++ + Sbjct: 105 FAIYDTTRPYELQFDAAFRQTVFKLPRDMLQRRIGATEAVTAISFGADSPLQPLAYDFII 164 Query: 157 ESMNNPALSETESEAALQAMVC-LLRPVLHQRESVQPRRERQFQKVVTL-IDDNIREEIL 214 TE L L+ L +R QP + + I ++R + Sbjct: 165 RLCERADHIGTEHAERLSDQAADLVAMTLAERLRTQPLPASSHRAALLYRIKAHVRTHLA 224 Query: 215 RPEW----IAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCA-DAIRHAADDEKLAGI 269 P+ A E G+S R + +F+D+ L +++ RL C D A ++ I Sbjct: 225 DPDLSLATAARELGLSARYVNDLFSDEQLSFQRFVLAERLRQCQRDLGMPALAHRHISEI 284 Query: 270 GFHWGFSDQSHFSTVFKQRFGMTPGEYRR 298 WGF+D SHF VF+ +FG++P E+RR Sbjct: 285 ALSWGFNDLSHFGRVFRAQFGLSPREWRR 313 >UniRef50_C3JMU3 Transcriptional regulator, AraC family n=2 Tax=Rhodococcus erythropolis RepID=C3JMU3_RHOER Length = 307 Score = 83.6 bits (205), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 62/255 (24%), Positives = 117/255 (45%), Gaps = 10/255 (3%) Query: 51 TSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYW 110 ++G+ L+RT + V+ + Q SG ++Q + Q ++ AG++ + D + W Sbjct: 51 STGMRLTRTPRHVRSASMPVLAIALQESGIGHLDQHDEQRRVPAGELLMTDLTSTYDFSW 110 Query: 111 QESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETE-- 168 + L +P L + ++L V ++H ++E + AL ET+ Sbjct: 111 PGTGASQCLYVPMDRLGLPIDTVRDAATRPHHSNLYPVMIAH--VRELFRSAALLETDPA 168 Query: 169 ----SEAALQAMVCLLRPVLHQR-ESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGET 223 EA+++ L+ + H ++ PR + I +++ + L P IA Sbjct: 169 AEQLGEASIELARALVTSIAHANPDASAPRSALAMTSIRRYIREHLHDPTLNPARIAHAH 228 Query: 224 GMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAI-RHAADDEKLAGIGFHWGFSDQSHFS 282 +S+R LY++ +D G + Q+I +RL D + R A D +A + GF D HFS Sbjct: 229 NISLRQLYKICSDNGFRIEQWIITQRLQKARDELARPATVDLPIATVAHRAGFVDAGHFS 288 Query: 283 TVFKQRFGMTPGEYR 297 F+Q +G++P +R Sbjct: 289 RRFRQAYGLSPTRWR 303 >UniRef50_C9YUR8 Putative transcriptional regulator n=1 Tax=Streptomyces scabiei 87.22 RepID=C9YUR8_STRSW Length = 299 Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 61/214 (28%), Positives = 100/214 (46%), Gaps = 6/214 (2%) Query: 90 VQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQ 149 V + GDI DA P S + L+ R L + + A + + Sbjct: 76 VHLRPGDICFYDAGHPPSPDLPAHCRLKVFLVSREELGLEDGDLRRVVAAPVARTSRLGT 135 Query: 150 LSHRLLQESMN----NPALSETESEAALQAMVCLLRPVLHQRESVQPR-RERQFQKVVTL 204 L L E + +P ++E + A+ + L Q E+ P R +VV Sbjct: 136 LLSPFLSELADTVSADPPVAEMLARNAVNLLATLATERSGQDEAQTPGVRSPMVARVVRF 195 Query: 205 IDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAADDE 264 ID+++ + L PE IAG +SVR L+++F D+G V ++I+ RRL+ C + H + Sbjct: 196 IDEHLSDADLSPEVIAGAHHISVRYLHKLFRDEGTTVGRWIQRRRLEECRRDLVHGLRNR 255 Query: 265 K-LAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 + +A + WGF +HFS VF+ +GM+P E+R Sbjct: 256 RTIASVAGRWGFLSATHFSRVFRAAYGMSPSEWR 289 >UniRef50_A9D8L4 Transcriptional regulator, AraC family protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D8L4_9RHIZ Length = 311 Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 72/277 (25%), Positives = 119/277 (42%), Gaps = 43/277 (15%) Query: 40 FAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITL 99 A +S++ + RT Q+++ + FQL GQ+ + Q + +I AG + L Sbjct: 58 LADDASISSIKAGAQIVRRTRQDIQLRACEAVFINFQLQGQSTISQRGIEAKIDAGSLVL 117 Query: 100 LDASRPCSLYWQESSKQISLLLPRTLLE-----------QYFPHQKPICA------ERLD 142 LDA+ P ++ + +Q L LP++ LE + Q A + L Sbjct: 118 LDATEPFAMKFDRQFEQACLHLPKSALEVNGIRASEFVGRAVTRQSGFAAPLFSAIDSLT 177 Query: 143 ADLPMVQLSHRLLQESMNNPALSETESEA-ALQAMVCLLRPVLHQRESVQPRRERQFQKV 201 A +P + L+Q M + LS A A Q +V + V+H Sbjct: 178 AGVPAPHVLPGLMQ--MLSFGLSNARRNAVADQHLVTVQNFVVH---------------- 219 Query: 202 VTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAA 261 N+ L P A +S R L+++FA G+ ++ + RL C I A+ Sbjct: 220 ------NMGNSDLSPGLTARHFRISTRHLHKLFARDGITFGTFLLDARLQACRKRIL-AS 272 Query: 262 DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRR 298 DE ++ + F GF QSHFS F+Q+FG +P + R+ Sbjct: 273 PDEPVSLVAFAHGFRSQSHFSRAFRQKFGCSPNQLRK 309 >UniRef50_B2GIQ7 Putative AraC family transcriptional regulator n=1 Tax=Kocuria rhizophila DC2201 RepID=B2GIQ7_KOCRD Length = 316 Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 87/315 (27%), Positives = 134/315 (42%), Gaps = 34/315 (10%) Query: 6 DNEFQQWLSQINQVCGNFTGRLLT----ERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQ 61 D QW IN +F +T + L T + L +TTS + RT + Sbjct: 12 DLTLAQWRETIN---ASFAALEITAPVDSEFRADLTTVELDDVHLFDMTTSAHRVVRTAE 68 Query: 62 EVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLL 121 V + QL G+A + QD R+ +G G + L A RP L + + + Sbjct: 69 MVARDAGEYLKLSLQLQGRARLRQDGRECVLGPGGLGLYAAYRPYELVYDGPQHSLVMTF 128 Query: 122 PRTLLEQYFPHQ-KPICAERLDAD-------LPMVQLSHRLLQESMN---NPALSETESE 170 PR+++ Q P Q + A+R+ + +PM R L E+M+ P S+ Sbjct: 129 PRSVV-QLIPAQLDLVTAQRIGQEDGLGRVAVPMF----RNLAENMDLLRGPHASKL-VR 182 Query: 171 AALQAMVCLLRPVLHQRESVQPRRERQ----FQKVVTLIDDNIREEILRPEWIAGETGMS 226 +AL +V +L E V+P Q+ I D++ + L P IA +S Sbjct: 183 SALDMLVSVL-----SAEVVEPAGAHAGDLLVQQATAYIADHLADPELSPGSIARALYVS 237 Query: 227 VRSLYRMFADKGLVVAQYIRNRRLDFC-ADAIRHAADDEKLAGIGFHWGFSDQSHFSTVF 285 VR L+ FA + L VA +IR RL A+ A D+ + I G +D +H S F Sbjct: 238 VRQLHSRFAAQHLTVAAHIRAVRLAAIRAELADPAHRDDTVHTISARRGLTDPAHVSKAF 297 Query: 286 KQRFGMTPGEYRRKF 300 K +G +P YRR+ Sbjct: 298 KAEYGESPTAYRRRV 312 >UniRef50_A4Q9T5 Putative uncharacterized protein n=1 Tax=Corynebacterium glutamicum R RepID=A4Q9T5_CORGB Length = 308 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 65/231 (28%), Positives = 108/231 (46%), Gaps = 6/231 (2%) Query: 75 FQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQK 134 QL G A + QD R + GD+ L RP L + E + + + PR+LL+ Sbjct: 75 LQLEGVATLVQDGRSCTMSPGDLALYTGKRPYHLVFDEPQRSLVVYFPRSLLQLRDDQID 134 Query: 135 PICAERLDADLPMVQLSHRLLQE-SMNNPALSETESEAALQAMVCLLRPVLHQR-ESVQP 192 I A + D + ++ L ++ + N L +++ ++A + LL V + E + Sbjct: 135 MITATPISRDEGLGKIIIPLFEQFARNLDDLQGLHAQSLIRASLDLLVTVFAEHTERMNG 194 Query: 193 RRERQ---FQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRR 249 E F++ + ID+N+ + L P IA +SVR+L+ F+ +GL V+ YIR RR Sbjct: 195 ELEDSSQLFRRATSYIDENLHDLDLAPGTIADALYVSVRNLHAHFSSQGLTVSAYIRARR 254 Query: 250 LD-FCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRK 299 L+ AD D + I G D S+ S F+ +G +P YR + Sbjct: 255 LNAIHADLGNPQMRDFTIQSISARHGLVDASYVSKAFRAEYGESPRTYRTR 305 >UniRef50_UPI000050F7EC transcriptional regulator, AraC family protein n=1 Tax=Brevibacterium linens BL2 RepID=UPI000050F7EC Length = 337 Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 71/291 (24%), Positives = 122/291 (41%), Gaps = 17/291 (5%) Query: 21 GNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDA-------WFYT 73 G F G + Y V+ +H + T S ++ +E G D ++ Sbjct: 49 GGFQGTISARDYDSVVMSHISANPHAVLRTPSLIS-----RETAGPADGTAAAASNYYKV 103 Query: 74 VFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQ 133 QL G ++ QD R+V + G + + D SRP +L + ++ P++ + Sbjct: 104 SLQLKGHGLLIQDGREVSLAPGSLAIYDTSRPYTLSFDCDFSSYVMMFPQSRVNLPADTV 163 Query: 134 KPICAERLDADLPMVQLSHRLL-QESMNNPALSETESEAALQAMVCLLRPVLHQR---ES 189 + A + A+ + ++ +++ Q P LS + +V LL V+ Sbjct: 164 GELTATSIGAEHQLGAVATQIITQAGAMLPTLSRSIGIRLAGNVVDLLTTVMADELAEAE 223 Query: 190 VQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKG-LVVAQYIRNR 248 V R+R + ++ ID N+ + L P IA MSVR+L+++F G V ++ R R Sbjct: 224 VPGERQRLWSEITAYIDANLADPQLSPSTIAAAHFMSVRALHQVFEGSGETVSSEIRRRR 283 Query: 249 RLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRK 299 D +A IG WG D +HFS +F+ G P +YRR Sbjct: 284 IARCRQDLADPGQVQVPVAAIGARWGLGDPAHFSRLFRSVVGRPPAQYRRS 334 >UniRef50_C8X8B4 Transcriptional regulator, AraC family n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8X8B4_NAKMY Length = 313 Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 70/240 (29%), Positives = 109/240 (45%), Gaps = 6/240 (2%) Query: 58 RTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQI 117 R E+ G+D + + L G+ ++ Q E Q + G + + D+ P +E + Sbjct: 71 RGSHEIAGTDGGYLVMLMTLRGREVVRQGESQAALEPGSVVVWDSETPAEFLVREPLVKR 130 Query: 118 SLLLPRTLLEQYFPHQKPICAERLDADLPMVQ-LSHRLLQESMNNPALSETESEAALQAM 176 SLL+P+ L + + + LDA P V LS L S L AA A Sbjct: 131 SLLVPKAALAEVGARGELMTGSVLDATAPAVTLLSGYLDALSATIDQLPLGALPAARNAT 190 Query: 177 VCLLRPVLHQRESVQPRRERQFQKVV-TLIDDNIREEILRPEWIAGETGMSVRSLYRMFA 235 + LL L + V P+ + V ID ++R++ L ++ G+SVRSL+R F Sbjct: 191 IELLAAALQEPVRV-PQATAATRTVAEAYIDKHLRQQRLSAAEVSRAVGVSVRSLHRAFE 249 Query: 236 DKGLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGE 295 D G VA +IR RRL D + + + W ++D SHFS FK+ FG+ P + Sbjct: 250 DSGESVASFIRLRRLARARDDLLAGM---SVGQVARRWHYTDPSHFSRSFKRHFGVNPSD 306 >UniRef50_A5VEH1 Transcriptional regulator, AraC family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5VEH1_SPHWW Length = 307 Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 60/237 (25%), Positives = 116/237 (48%), Gaps = 12/237 (5%) Query: 72 YTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFP 131 + + L+G ++ +RQ + AGD+ L+D+ P ++ ++ + L +PR+ + Q P Sbjct: 73 FILMPLAGDIHVDHYDRQNVLSAGDMVLMDSHAPSTIDAFGRNRSVVLAMPRSTVSQLRP 132 Query: 132 HQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAAL----QAMVCLLRPVLHQR 187 + RL + + +L ++ A E ++ ++ M L R + ++ Sbjct: 133 DSDRLFGRRLQGRKGIGNMLSAMLASIVDADAEEEMDARDSMLTLSVTMSLLDRLIENRP 192 Query: 188 ESVQPRRER---QFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQY 244 +S RR R + K+ + + +N + + E +A +S RSLYR+F + G Q+ Sbjct: 193 DSDSHRRSRAEAEIGKMRSWVVENAADPDMSIETLARRFALSRRSLYRLFGEVGATPRQW 252 Query: 245 IRNRRLDFCADAIRHAADDEK---LAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRR 298 + + RLD + A D + ++ + F GF+D SHF+ +FK+RFG+ PG R Sbjct: 253 LADVRLDEARKWL--VAGDPRFRTVSQVAFAAGFNDSSHFTRLFKRRFGVLPGSLAR 307 >UniRef50_A9E8K4 TRANSCRIPTIONAL REGULATOR, ARAC FAMILY n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9E8K4_9RHOB Length = 314 Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 70/260 (26%), Positives = 119/260 (45%), Gaps = 17/260 (6%) Query: 43 GLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDA 102 G + + V+ +RT ++ +F+ + Q G+ ++ Q+ + GD+ ++DA Sbjct: 50 GFEAALVSLDAQEAARTQTCIRRDPGEYFFMLVQDVGECVVHQNGSSTLLRPGDMYIVDA 109 Query: 103 SRPCS-LYWQESSKQISLLLPRTLLEQYFPHQKPIC--AERLDADLPMVQLSHRLLQESM 159 +RP +Y + + QIS+ LPR + F IC +D + P+ +L + M Sbjct: 110 TRPSKFVYDGQLAHQISVHLPRDEMIGRF---GGICDGGVAIDRNDPLWLALRAVLYKMM 166 Query: 160 NNPALSETESEAALQ---AMVCLLRPVLHQRES-VQPRRERQFQKVVTLIDDNIREEILR 215 + P E LQ A L+ LH+R S R + ++ + L+ + R+ Sbjct: 167 HCP------PETGLQLSEAFYGLMGAYLHERRSQTLDARGQIIERALQLMTRHYRDPEFG 220 Query: 216 PEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFC-ADAIRHAADDEKLAGIGFHWG 274 P +A G+S+RSL R F G Q + RL A+ R + + + G Sbjct: 221 PSALALHLGVSLRSLQRYFEPLGETPGQRLLQLRLTQAHAELSRRGGMEVSVTDCAYGCG 280 Query: 275 FSDQSHFSTVFKQRFGMTPG 294 F+D SHF F+QR+GMTPG Sbjct: 281 FNDLSHFYRAFRQRYGMTPG 300 >UniRef50_C9NEM0 Transcriptional regulator, AraC family n=1 Tax=Streptomyces flavogriseus ATCC 33331 RepID=C9NEM0_9ACTO Length = 323 Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 70/264 (26%), Positives = 118/264 (44%), Gaps = 12/264 (4%) Query: 44 LKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDAS 103 ++L ++ V LSRT V+ + V Q G A + QD R + G ++D Sbjct: 50 VRLLSLEADPVRLSRTPGLVESAPARAVAVVLQEHGHAALTQDGRSTVLEPGQAAVVDLR 109 Query: 104 RPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDA--DLP--MVQLSHRLLQESM 159 RP SL +E + L +P L+ + + L +P +V L RL + Sbjct: 110 RPFSLDERERFRLRVLRVPDHALDVPAHSVRGVTGRALSPRDGVPALLVPLLARLAVTAG 169 Query: 160 NNP-----ALSETESEAALQAMVCLLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEIL 214 P AL ++ L A + + R+R + V+ ID ++ + L Sbjct: 170 RIPPSVADALGGNTTD--LLATLVHDASDPDDDDHAGAARDRLVRSVLRHIDRHLGDPDL 227 Query: 215 RPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAI-RHAADDEKLAGIGFHW 273 PE IA +SVR L+R+F D+ + V++ ++ RR++ CA + R + ++ + W Sbjct: 228 GPESIAAAHRISVRYLHRLFEDEAVTVSRLVQRRRVEECAKELARRGSVSATVSAVSSRW 287 Query: 274 GFSDQSHFSTVFKQRFGMTPGEYR 297 GF +HFS FK +G PG +R Sbjct: 288 GFHSPAHFSRAFKALYGHPPGRWR 311 >UniRef50_B1G4X3 Transcriptional regulator, AraC family n=1 Tax=Burkholderia graminis C4D1M RepID=B1G4X3_9BURK Length = 312 Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 67/237 (28%), Positives = 115/237 (48%), Gaps = 14/237 (5%) Query: 65 GSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLL-LPR 123 G +D+ F+ + G+ + Q R V GD+ L DA+RP ++ ++ I ++ +PR Sbjct: 74 GPNDS-FWVGLMMKGEGRLAQSGRTVVQREGDMVLYDAARP--FEFELAAGTICIVEVPR 130 Query: 124 TLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAAL--QAMVCLLR 181 +L+ FP + A + AD+P+ L ++++ES S +L A+V +L Sbjct: 131 KVLDFRFPLADTLTATCIGADMPIGHLLAQMIRESAARDLSGNQGSSGSLVGSAIVDMLA 190 Query: 182 PVLH---QRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKG 238 L R + E ++ ID ++ L E +A +S R+L R FA +G Sbjct: 191 ATLEIQAGRPAHVSAHEALVERTKAYIDRHLDVASLDVEQLAAAQSVSSRTLTRAFAQQG 250 Query: 239 LVVAQYIRNRRLD--FCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTP 293 ++ RRL+ +CA HA + + A +GFSD SHFS F++ +GM+P Sbjct: 251 STPMSWLWRRRLEASYCALKEGHARNVTEAA---LRFGFSDLSHFSRAFRKVYGMSP 304 >UniRef50_B1LTK5 Transcriptional regulator, AraC family n=2 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1LTK5_METRJ Length = 327 Score = 80.9 bits (198), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 72/277 (25%), Positives = 128/277 (46%), Gaps = 23/277 (8%) Query: 34 GVLDTHFA-KGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQI 92 G++ T FA + L+ +T RT + D F ++ LSGQ +Q +R Sbjct: 51 GLVFTKFALRNLRAATT-------PRTLRHENHKTDHLFMSIV-LSGQVRADQYDRSSTD 102 Query: 93 GAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSH 152 GD ++ D + P ++ S+ +++ +PR LE + + DLP L+ Sbjct: 103 RVGDFSIRDTNTPWTIEHGGYSEVLAIGIPRERLEGALGSARLFAGVTVGGDLPTATLTR 162 Query: 153 RLLQESMN-----NPALSETESEAALQAMVCLLRPVLHQRESVQPRRERQF-QKVVTLID 206 L ++ P ++E+ L +V L L RE+ QP ++ Q+ ++ Sbjct: 163 SFLGNLLSLGDRLTPQVAESMVSTGLDLIVASLAERL-AREAQQPVQDSVVVQRARAYLE 221 Query: 207 DNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAADDE-- 264 ++ + L P +A G+S+R L +F + +A +I +RRL+ A + AD Sbjct: 222 AHLHDPTLDPPRLAAAAGVSLRRLQALFRAQDRHIADWIWHRRLEAAAKRL---ADPGCL 278 Query: 265 --KLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRK 299 L + + GF QSHFS FK+R+G++P +YR + Sbjct: 279 HMPLGTLAYGCGFLSQSHFSRRFKERYGLSPRDYRMR 315 >UniRef50_Q9S2C6 Putative regulatory protein n=3 Tax=Streptomyces RepID=Q9S2C6_STRCO Length = 334 Score = 80.9 bits (198), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 63/265 (23%), Positives = 121/265 (45%), Gaps = 7/265 (2%) Query: 44 LKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDAS 103 L++ + + V + RT + + ++ + Q++G +++ Q+ R+ +G G + ++ Sbjct: 53 LRICSARATAVTIRRTERLAREDEEPAVFLGLQVTGTSLVAQNGRECVLGPGQFAVYESI 112 Query: 104 RPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPA 163 P +L + E L PR+ L + + L P +L+ + + Sbjct: 113 APYTLLFDEGVDHHFLRFPRSALALPDRLLRDTSSVTLGPGNPTARLAFTYFSQLAASDE 172 Query: 164 LSE-TESEAALQAMVCLLRPVLHQRESVQPRRERQFQKVVTL-IDDNIREEILRPEW--- 218 L + ++A ++ V LLR VL + + + + L I IR + P+ Sbjct: 173 LHQGVHADAVVEPSVELLRAVLTTQHGDPGLAKGPLESTLGLRITQYIRAHLADPDLSAA 232 Query: 219 -IAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAADDEK-LAGIGFHWGFS 276 IA +SVR LY + + G+ + +IR+ RL C + + +A IG WGF Sbjct: 233 RIAAAHDISVRHLYTVLSGLGISLGDWIRSHRLAECRRELSGPNSRLRTIAAIGRRWGFV 292 Query: 277 DQSHFSTVFKQRFGMTPGEYRRKFR 301 + +HFS VFKQ +G++P +R + R Sbjct: 293 NATHFSKVFKQAYGLSPRAWRDQNR 317 >UniRef50_UPI0001B58708 AraC family transcription regulator n=1 Tax=Streptomyces sp. C RepID=UPI0001B58708 Length = 328 Score = 80.9 bits (198), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 62/232 (26%), Positives = 105/232 (45%), Gaps = 20/232 (8%) Query: 83 MEQDERQVQIGAGDITLLDASRPCSLYWQESSKQ----ISLLLPRTLLEQYFPHQKPICA 138 + Q R V G GD L D+SRPC + + Q + + +PR LL + + Sbjct: 92 LSQSGRDVMAGEGDFVLYDSSRPCRGFAKAPDGQDIAGVIVQVPRALLPLHPNTLDALTI 151 Query: 139 ERLDADLPMVQLSHRLLQESMNN-PALSETESEAALQAMVCLLRPVLHQRE------SVQ 191 R+ + + L L + M + P+ + ++ A + LL +L + +++ Sbjct: 152 TRIPGNTAIGTLLRTYLTDLMAHAPSYGKADAPRLGSATLDLLTVLLARTARDGRCLTLE 211 Query: 192 PRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLD 251 R ++ I + E L P IA +SVR L++++ D + V+ IR+ RL+ Sbjct: 212 ARHTALRARIGHFIQQRLAEPDLTPASIAAAHRISVRYLHKLYQDDRMTVSALIRHTRLE 271 Query: 252 FCADAIRHAADDEKL-----AGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRR 298 IR D +L + I WGF + +HFS F+ +G+TP EYRR Sbjct: 272 ----RIRRDLSDPRLGARCVSAIAARWGFPEPAHFSRAFRSAYGVTPSEYRR 319 >UniRef50_A6X8D5 Helix-turn-helix-domain containing protein AraC type n=1 Tax=Ochrobactrum anthropi ATCC 49188 RepID=A6X8D5_OCHA4 Length = 340 Score = 80.5 bits (197), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 71/277 (25%), Positives = 116/277 (41%), Gaps = 9/277 (3%) Query: 27 LLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQD 86 L + + +D A L TV +SG R + ++ F + G+ + Sbjct: 40 LTYDSFYANVDAFHAGDLMFGTVRSSGQTTERVKSRIAVDSLDYYMLQFYVFGKRSAQAR 99 Query: 87 ERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLP 146 R+ GD+ ++D ++P E + L+LPR L + RL A P Sbjct: 100 GREEIAQQGDLLIVDMTQPLKTVSTEY-QSFDLVLPRRLFDPLLAQPDGYGGSRLAAQEP 158 Query: 147 MVQL--SHRLLQESMNNPALSETESEAALQAMVCLLRPVLH---QRESVQPRRERQFQKV 201 + L SH +L P ++ ++ A + L VL+ E P R + V Sbjct: 159 LTALLRSH-VLALYAAGPKMTPAQAMAMQGPTLALAAAVLNGVVTEEQAVPVRTAAWLAV 217 Query: 202 VTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAA 261 I+DN+ + L +A S +LYR+ + + Y+R RRL C D + H A Sbjct: 218 RRYIEDNLADLTLSSASVAQHFAFSRATLYRIM-EPVHGFSSYVRQRRLYRCRDDLVHPA 276 Query: 262 DDE-KLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 ++ I WGF++ FST+F + FGM P +YR Sbjct: 277 CRHLSVSEIAISWGFANAQTFSTLFSRHFGMPPRDYR 313 >UniRef50_Q140Z5 Transcriptional regulator, AraC family n=2 Tax=Burkholderiales RepID=Q140Z5_BURXL Length = 336 Score = 80.5 bits (197), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 64/278 (23%), Positives = 128/278 (46%), Gaps = 6/278 (2%) Query: 26 RLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQ 85 RL Y V FA + TV + RT V+ D+ + +G+ Sbjct: 49 RLPATFYAHVKQHDFAGAEIVETVCDPCMG-QRTAGHVRHDDELYVGVQLTTAGRERFRI 107 Query: 86 DERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQK-PICAERLDAD 144 + V++ +GD+ + + E +++L++P +++ + P +K P ++++ Sbjct: 108 GDAGVEVASGDVVVWTTGQAVEFEVLERLHKVTLMIPWSVMRERLPERKQPPTGGKIESR 167 Query: 145 LPMVQL-SHRLLQESMNNPALSETESEAALQAMVCLLRPVLHQRESVQP--RRERQFQKV 201 + + L + LL S L E+ + ++ + LL L ++ ++V Sbjct: 168 MGVGSLLAVHLLALSNEIATLDESVQGSVNRSTLELLGIALSGQQPCATFDASVAMLRRV 227 Query: 202 VTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAA 261 I ++ E+ L P IA +S+R L+ +F + V+ +I +RRL C A+ A Sbjct: 228 QDFILQHLHEDDLNPTRIAEANHISLRYLHMLFQRSDMTVSGWILDRRLHACKQALMDPA 287 Query: 262 -DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRR 298 + ++++ I F WGF+ SHF F++++G +PG+ RR Sbjct: 288 YNRQRISEIAFRWGFNSTSHFCRAFREKYGASPGDVRR 325 >UniRef50_A2SKZ3 Transcriptional regulator, AraC family n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SKZ3_METPP Length = 325 Score = 80.1 bits (196), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 70/268 (26%), Positives = 122/268 (45%), Gaps = 21/268 (7%) Query: 44 LKLSTVTTSG---VNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLL 100 L ++ +T+ G +++R+ ++V + + +F QL G + Q R+ ++ G + Sbjct: 54 LSVTRITSVGHGFKHITRSQRQVARAHEDFFLVSVQLEGSCWIAQGGRETRLAPGQFAIY 113 Query: 101 DASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPIC-AERLDADLPMVQLSHRLLQE-- 157 D RP L +E +Q L +P L + P C A+ A + RL+ + Sbjct: 114 DTRRPYELLLEEDYQQAVLRIPCATLMA----RAPDCDAQTAQAISAASSSARRLIHQVR 169 Query: 158 ------SMNNPALSETESEAALQAMVCLLRPVLHQRESVQPRRERQFQKVVTLIDDNIRE 211 ++ PAL+E A L A+ LR R + R ++ + ++ + Sbjct: 170 EACRGTRLSRPALAE----ALLGAVGGGLRGDADSRAATPHSRRTLLARIKAHVVAHLGD 225 Query: 212 EILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADA-IRHAADDEKLAGIG 270 L IA G+S L+++F +G + ++I +RL C A I A L I Sbjct: 226 PQLSVPGIAATLGLSTSYLHQLFRSEGSTLERWIWAQRLAACERALIDPRAARHTLTQIA 285 Query: 271 FHWGFSDQSHFSTVFKQRFGMTPGEYRR 298 + GFSD +HFS F+QR+G +P EYR+ Sbjct: 286 YSHGFSDAAHFSRSFQQRYGASPREYRK 313 >UniRef50_C0GAC0 AraC-family transcriptional regulator n=4 Tax=Brucella RepID=C0GAC0_9RHIZ Length = 332 Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 67/278 (24%), Positives = 116/278 (41%), Gaps = 6/278 (2%) Query: 30 ERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQ 89 +R++G L T + +S +T+ + R S + F + + Q R+ Sbjct: 50 DRFSGDLTTWEFGNVSISRLTSDALQYLRLPHHFGSSREEEFLVTVPVKAEVYFSQCGRE 109 Query: 90 VQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQ 149 V+ G L +S P E++ L + L C + A+ Sbjct: 110 VRCRPGGFFLERSSEPYHFSHAEAADMWVLKVEGDALCGRMRAPDRFCTLQFGANNGAGG 169 Query: 150 LSHRLLQESMNN-PALSETESEAALQAMVCLLRPVLHQRESV-----QPRRERQFQKVVT 203 L +LQ + +++ + +V LL + + V R ++ Sbjct: 170 LFTDMLQLLPDRFDGMTQEARITVGRQLVDLLVLAIKADDRVLTSGNSTVRSAHLARIEA 229 Query: 204 LIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAADD 263 I N+++ L P+ IA G+S R L+ +F D G V +IR +RL C +A+ + Sbjct: 230 YIRTNLQDFRLDPDRIARACGISTRYLHELFKDTGQTVRHWIREQRLAACREALEDPDNI 289 Query: 264 EKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKFR 301 + A I + WGF+DQ+ FS FK +FG+ PGE+R R Sbjct: 290 QTAAEIAYSWGFNDQTQFSRAFKAQFGLPPGEHRENAR 327 >UniRef50_UPI0001AF1428 AraC family transcription regulator n=1 Tax=Streptomyces ghanaensis ATCC 14672 RepID=UPI0001AF1428 Length = 325 Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 74/270 (27%), Positives = 130/270 (48%), Gaps = 21/270 (7%) Query: 44 LKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDAS 103 L+++ + ++ RT + ++ D + QL+G M QD + GAG + + D+S Sbjct: 53 LQIAELDLPQLDTVRTPRTIRRFDPEVYQVNCQLAGDGGMAQDGNESVFGAGHLVVADSS 112 Query: 104 RPCSLYWQESSKQISLLL---PRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMN 160 P + +S++ + ++ PR L + + A + D M +R L + Sbjct: 113 LPYDVRINRTSERTTTVVVSVPRARLPLPPRAVRRLLAVPVPVDRGMGGTLYRWLADVAR 172 Query: 161 NPALSETESEAALQAMV------CLLRPVLHQRESVQP--RRERQFQKVVTLIDDNIREE 212 A TE++A A V C+L L +++ P RR ++ ID N+ + Sbjct: 173 R-AEEFTEADAPTLASVTTDLLACVLGGCLDSEDALPPESRRRALHTRIRDFIDQNLGDP 231 Query: 213 ILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAADDEKLAG---- 268 L P +A G+SVR L+++FA +G A ++R+RRL+ C + D +L G Sbjct: 232 SLSPATVAAAHGISVRHLHQLFAAEGEAPAAWVRHRRLERCRRDL----ADPRLRGRSVR 287 Query: 269 -IGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 I WGF+D + FS VF++ +GMTP ++R Sbjct: 288 SIAARWGFTDPATFSRVFRRAYGMTPTDHR 317 >UniRef50_B2JSH9 Transcriptional regulator, AraC family n=1 Tax=Burkholderia phymatum STM815 RepID=B2JSH9_BURP8 Length = 354 Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 71/273 (26%), Positives = 120/273 (43%), Gaps = 11/273 (4%) Query: 30 ERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQ 89 E ++G ++ H L + + RT +VK D + SG M+Q R+ Sbjct: 73 ENFSGEVNGHQVGQLLVGRYSAKQHIWDRTEHDVKTKPDEDIVALLLESGSGKMQQAGRK 132 Query: 90 VQIGAGDITLLDASRPCSLYWQE--SSKQISLLLPRTLLEQYFPHQKPICAERLDADLPM 147 + +G GDI L D +RP + E I + +PR+L+ +F + ++ + Sbjct: 133 LVMGVGDIMLFDGARP---FRHEVIPDSIILVRMPRSLIRSHFSAVEKFVNMKIADGKSI 189 Query: 148 VQLSHRLLQESM----NNPALSETESEAALQAMVCLLRPVLHQRESVQPRRERQ-FQKVV 202 L L++E+ P L+ A + + + E + R F+K + Sbjct: 190 QPLLSGLMREAYALTEETPLLARIHLANAFINAISVALEIQSASEVNESYEGRVLFEKAL 249 Query: 203 TLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAAD 262 ++ID I ++ L IA +S R+L R+FA +G +Q + NRRL ++ Sbjct: 250 SIIDARIDDQALNVAEIASALHVSDRTLSRIFAREGTTPSQTLWNRRLQKSYRLLQENV- 308 Query: 263 DEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGE 295 ++ I F GFSD SHFS FK+ FG P + Sbjct: 309 ALQVTQIAFQCGFSDLSHFSRSFKRVFGSAPSQ 341 >UniRef50_A8ICM9 Putative transcriptional regulator n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8ICM9_AZOC5 Length = 346 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 71/262 (27%), Positives = 118/262 (45%), Gaps = 11/262 (4%) Query: 49 VTTSGVN---LSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRP 105 V SG + + R+ +++ +D +G + + V++ AGDI+L+D RP Sbjct: 64 VGASGFSDHAIGRSKRKIARTDMDHLLVQLHKTGGLDADAEGNVVRVRAGDISLIDLGRP 123 Query: 106 CSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQ-LSHRLLQESMNNPAL 164 + + +S+ + ++LPR+ L +K L D M L LL + A Sbjct: 124 MDGHAK-TSQTLDVILPRSQLPDLAQRRKTPHGAVLSGDSLMGGILGDFLLSLARRLDAA 182 Query: 165 SETESEAALQAMVCLLRPVLHQRESVQPRRERQF----QKVVTLIDDNIREEILRPEWIA 220 + ++ +A L+ V +E ++ ID N+ + L P +A Sbjct: 183 TPRDAGLLTRAAADLITTCFQSETGVAAAQEGLLLAASERARRYIDANLSKAELVPVRVA 242 Query: 221 GETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAAD-DEKLAGIGFHWGFSDQS 279 E MS SLYR+F +G +A+YIR RRL + H A ++ I F GFS ++ Sbjct: 243 RELRMSRSSLYRLFEAEG-GIAKYIRTRRLTTALYLLTHPAHAGMRIGEIAFRCGFSSEA 301 Query: 280 HFSTVFKQRFGMTPGEYRRKFR 301 HFS F+ F M P E R++ R Sbjct: 302 HFSRAFRSEFDMKPSEARKRAR 323 >UniRef50_A1WI21 Transcriptional regulator, AraC family n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WI21_VEREI Length = 317 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 71/280 (25%), Positives = 118/280 (42%), Gaps = 10/280 (3%) Query: 30 ERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTV-FQLSGQAIMEQDER 88 R+ G +D ++LS + +S + R Q + + T+ FQ Q Q R Sbjct: 34 HRFDGQIDIWDLGTVELSLLQSSALAYRRLRQHCRAQERQMLVTMPFQ--SQVEFTQLGR 91 Query: 89 QVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMV 148 + G L + P + + L LP L+ CA + D+ + Sbjct: 92 STRCAPGQFLLESSEEPYDFGHGQDNAMWVLKLPVAALKARIGEPSRFCARQYDSLQGLG 151 Query: 149 QLSHRLLQESMNNPALSETESEAALQA--MVCLLRPVLHQ-----RESVQPRRERQFQKV 201 +L H LQ + +L A ++ LL L Q + S R+ ++ Sbjct: 152 RLFHDYLQLVARHCRADHGSHVRSLMASQLIDLLALSLQQHPDALQSSHSAVRDAHLARI 211 Query: 202 VTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAA 261 + ++ + L P+ IA +G+S+R L+++F D G VAQ+IR RL +A+ A Sbjct: 212 EAHVHRHLSDPALSPQSIAQASGISLRYLHQLFEDTGQSVAQWIRELRLQSAHEALSRAN 271 Query: 262 DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKFR 301 +A I + GF DQ+ FS F+++FG P E R R Sbjct: 272 GQTTVAQIAYGAGFGDQAQFSHAFRKKFGHAPSEMLRSSR 311 >UniRef50_C8Q8U1 Transcriptional regulator, AraC family n=1 Tax=Pantoea sp. At-9b RepID=C8Q8U1_9ENTR Length = 311 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 57/244 (23%), Positives = 109/244 (44%), Gaps = 4/244 (1%) Query: 58 RTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQI 117 RT + ++ + FY + +G + Q++ + AGD+ + DA+ P + + I Sbjct: 67 RTQECIRRHPNHDFYLGYICAGSGTLSQNDNHSCVSAGDVVIYDAATPFDFAMENVAINI 126 Query: 118 SLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETE--SEAALQA 175 + LPR ++E+ P + + LD P + ++L E+ A E +E Sbjct: 127 -VHLPRQMIEKEAPSIARLAGKTLDLSRPGMTSLKQMLTEAFAFNAERENAFLTEQFANT 185 Query: 176 MVCLLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFA 235 ++ ++ L+ ++S + + +VV+ + N+ E L IA +S R++ R+FA Sbjct: 186 LLNMIAVSLNLQKSDAALKPDLYSRVVSYLRLNLHEHDLSVAQIANAHHVSPRTVSRVFA 245 Query: 236 DKGLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGE 295 G ++ RL + + + + GFSD SHFS F++ FG TP Sbjct: 246 AHGTTPMNFVWQERL-LASHKVLAEGKARNVTQVAMDHGFSDMSHFSLAFRKAFGYTPSS 304 Query: 296 YRRK 299 R+ Sbjct: 305 LIRQ 308 >UniRef50_B0T8Y9 Transcriptional regulator, AraC family n=1 Tax=Caulobacter sp. K31 RepID=B0T8Y9_CAUSK Length = 339 Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 69/303 (22%), Positives = 119/303 (39%), Gaps = 21/303 (6%) Query: 14 SQINQVCGNFTGRLLT--------ERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKG 65 S + + G F GR+ E +T L L L+ + + + R + Sbjct: 13 SSLVEWAGLFAGRIEAMDFKPSRPETFTAQLAGSDLGPLHLARLACAKTTIERGEGHLAH 72 Query: 66 SDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTL 125 ++ + + G + + + GD L D++ P + + + ++ + L + + Sbjct: 73 KTSPAYFLMLLIGGSGEISHYGNTITLEEGDFVLCDSTAPLKIAFPDDAEALFLKVGAST 132 Query: 126 LEQYFPHQKPICAERLDADLPMVQLSHRL-------LQESMNNPALSETESEA--ALQAM 176 L+++ P + C L AD + + + L+ + P L Sbjct: 133 LKEHLPSPECFCGRALRADEGLTATAGAMALNLFGRLEAGLALPYQDRVARHLLDILAMA 192 Query: 177 VCLLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFAD 236 L R S+ R V I+ ++R+ L P IA +S R L +FA Sbjct: 193 YALAFDTPTSRSSIVSGR---CATVKLFIEQHLRDPDLTPCSIAARMKLSSRYLRMIFAS 249 Query: 237 KGLVVAQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGE 295 + V+ YI RRL+ CA I A + I F WGF+ HF+ F+ R+GM P E Sbjct: 250 ENETVSAYILRRRLEQCARQIADPAWRGHSMTEIAFGWGFNSAPHFTRTFRDRYGMPPRE 309 Query: 296 YRR 298 YRR Sbjct: 310 YRR 312 >UniRef50_C9Z7X5 Putative regulatory protein n=1 Tax=Streptomyces scabiei 87.22 RepID=C9Z7X5_STRSW Length = 322 Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 68/239 (28%), Positives = 107/239 (44%), Gaps = 21/239 (8%) Query: 74 VFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQ 133 + LSG+ + Q + + +G + L D+ E +++SL+LPR EQ P Sbjct: 87 MINLSGRLVCRQGDDTLVLGPDQLLLWDSETAEGFDAVEPRRELSLMLPR---EQAPPAL 143 Query: 134 K----------PICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPV 183 + A A + QL R + +++ L + A Q++ L Sbjct: 144 AAAATSGRGAVSVAAGSGLASIAADQL--RAITRELDH--LGDAGLAIACQSLFDTLDTA 199 Query: 184 LHQ-RESVQPR---RERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGL 239 L R R RE +V I+D++ + L +A +SVR+L+ FAD G Sbjct: 200 LDSARAPAGTRSALREALLVRVRRYIEDHLDDADLCATSVAEAHDVSVRTLHLAFADTGT 259 Query: 240 VVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRR 298 V ++IR RRL C + A + + F WGF+D +HFS VFKQ +G+TP RR Sbjct: 260 TVGRWIRARRLRACYRDLTRAGGTATVTDVAFRWGFNDVAHFSRVFKQAYGVTPSSVRR 318 >UniRef50_UPI0001909644 transcriptional regulator, AraC family protein n=1 Tax=Rhizobium etli CIAT 894 RepID=UPI0001909644 Length = 315 Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 70/247 (28%), Positives = 108/247 (43%), Gaps = 19/247 (7%) Query: 65 GSDDA-WFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPR 123 G DD + Q G A ++Q I A + + D SRP L +Q+ L LPR Sbjct: 71 GPDDPDSIKLLVQTEGDACLDQGGLHAPISADALVIYDPSRPYMLTNSTPVRQLLLQLPR 130 Query: 124 TLLEQYFPHQ------KPICAERLDADLPMVQLSHRLLQESMNNPA-LSETESEAALQAM 176 L PH +P A + + LS L+ +M+ L + Q M Sbjct: 131 HAL----PHAAIERLTRPFTAHAEYDGMCRILLS--LMDSTMHEIGHLDAARRSSVGQTM 184 Query: 177 VCLLRPV----LHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYR 232 V L+R + L Q + + Q++ I+ + L IA G SVR +YR Sbjct: 185 VDLVRTMIGADLQQARPIANPLDLLLQRIKIFIESELARPDLSVTMIARRMGCSVRYIYR 244 Query: 233 MFADKGLVVAQYIRNRRLDFCADAIRHAAD-DEKLAGIGFHWGFSDQSHFSTVFKQRFGM 291 F + L + YI + RL A +R A +++GI F GFS +HFS F+ R+G+ Sbjct: 245 AFEVECLTPSDYIWDLRLQKAAARLRDAGGYAGEISGIAFALGFSSSAHFSRAFRHRYGL 304 Query: 292 TPGEYRR 298 +P ++R+ Sbjct: 305 SPSQWRK 311 >UniRef50_Q7CU51 Transcriptional regulator, AraC family n=1 Tax=Agrobacterium tumefaciens str. C58 RepID=Q7CU51_AGRT5 Length = 347 Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 75/298 (25%), Positives = 136/298 (45%), Gaps = 22/298 (7%) Query: 12 WLSQINQVCGNFTGRLLTERYTGV---LDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDD 68 W IN + F RL + + G +D F + L +S + R+ ++ Sbjct: 30 WRDSINVL---FDARLRSSQDDGFFASVDAAFIGNVALGRTQSSAQDFDRSRNKLARDGM 86 Query: 69 AWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQ 128 F F SG+++ + + G GD+ ++D ++P + + +SL++PR LLE Sbjct: 87 DGFLLQFYASGKSMSRRGTGETA-GPGDLYIIDMAQPLATATTDH-DHLSLVVPRRLLEG 144 Query: 129 YFPHQKPICAERLDADLPMVQLSHRLLQESMNN-----PALSETESEAALQAMVCLLRPV 183 L A LP+V L L+E+M + ++ + A + ++ L Sbjct: 145 RLIGSGNHHERVLPAGLPLVSL----LRETMTSIYRHFDVMNANDGAATVSPLLELATAA 200 Query: 184 L--HQRESVQPRRERQFQKVVT-LIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLV 240 + H RE +R + + ID+++ + L E + GE G+S R++YR+F G Sbjct: 201 INNHVREDNAQGVQRALRASIRRYIDNHLLDPALSVEKVMGEFGVSRRTVYRLFEPLGGF 260 Query: 241 VAQYIRNRRLDFCADAIRHAADDE-KLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 A I +RRL+ D +R +A + +GF++ +FS VFK+ FG++P + R Sbjct: 261 SA-CITHRRLERAMDFLRAPQSSHMTIADVAAAYGFTNPENFSRVFKKTFGLSPRQIR 317 >UniRef50_A5VUL5 Transcriptional regulator, AraC family n=1 Tax=Brucella ovis ATCC 25840 RepID=A5VUL5_BRUO2 Length = 186 Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 38/101 (37%), Positives = 58/101 (57%) Query: 201 VVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHA 260 +T N+++ L P+ IA G+S R L+ +F D G V +IR +RL C +A+ Sbjct: 81 TMTKARTNLQDFRLDPDRIARACGISTRYLHELFKDTGQTVRHWIREQRLAACREALEDP 140 Query: 261 ADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKFR 301 + + A I + WGF+DQ+ FS FK +FG+ PGE+R R Sbjct: 141 DNIQTAAEIAYSWGFNDQTQFSRAFKAQFGLPPGEHRENAR 181 >UniRef50_A3XDY1 Transcriptional regulator, AraC family protein n=1 Tax=Roseobacter sp. MED193 RepID=A3XDY1_9RHOB Length = 324 Score = 77.8 bits (190), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 69/280 (24%), Positives = 114/280 (40%), Gaps = 24/280 (8%) Query: 35 VLDTHFAKGLKLSTVTTSGVNLS----------RTWQEVKGSDDAWFYTVFQLSGQAIME 84 V D A K+ VT S V +S RT + + F VF G+ Sbjct: 40 VEDDRHALDAKIEIVTLSNVCISKFRSTTAKGFRTRKSIAHDTTEHFVFVFVTEGEMFFN 99 Query: 85 QDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDAD 144 Q R + AG +L + P L S I+L LP + +E + CA+ +++D Sbjct: 100 QLARWGTLSAGQYVMLRSGEPYELSCLSPSNAITLHLPVSDVEDRYKLAHLHCAKAIESD 159 Query: 145 LPMVQLSHRLLQESMNNP-----ALSETESEAALQAMVCLLRPVLHQRESVQPR---RER 196 + ++ ++Q + P A+S + ++ LLR E +Q + Sbjct: 160 AVLFPMAASVMQSVGSVPVSARKAMSHDLRRQVIDTILLLLRA-----ERIQANVDGNDG 214 Query: 197 QFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADA 256 +++ I+ N L A + GMSV ++R F L +R+ RL + Sbjct: 215 HLGRLIDYIEQNYANTDLSARTAAQDMGMSVSHVHRAFGSFNLTFGSTLRDTRLAQSYEL 274 Query: 257 IRHA-ADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGE 295 +R + + + I F GF D SHFS F+ FG++P E Sbjct: 275 LRSSEGQNSNIGEIAFKVGFLDHSHFSKSFRTAFGISPTE 314 >UniRef50_C0N2M9 Transcriptional regulator, AraC family protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N2M9_9GAMM Length = 343 Score = 77.4 bits (189), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 55/274 (20%), Positives = 130/274 (47%), Gaps = 6/274 (2%) Query: 32 YTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQ 91 Y +L + + ++LS + ++ + L R QE ++ V SGQ +EQ R+V Sbjct: 64 YNDMLIYPWQQDMRLSPIQSNAITLERLDQEPTEIAQDCYFAVLLTSGQYKLEQGGREVF 123 Query: 92 IGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLS 151 + G+++ DA++ + E +I + +PR LL++ + + A +L + + + Sbjct: 124 LNGGEMSFYDATQSHRITIPEQFSKILISIPRPLLDKRLNNVGRLTATKLASASGIGAVV 183 Query: 152 HRLLQESMNN-PALSETESEAALQAMVCLLRPVLHQRE----SVQPRRERQFQKVVTLID 206 ++Q ++ +++ + ++ L +L + E ++ R ++ I Sbjct: 184 ASMIQSTVQQLDQMTDVHFQQLSNPILDLFTLLLSENEVELSTLSRHRHFALLQIKQFIH 243 Query: 207 DNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAA-DDEK 265 +I+E L ++ G+S+R + +F ++ + +YI +RL + + + Sbjct: 244 LHIKESSLDAAAVSAGVGLSIRYINNLFYEEQTSLMRYITTQRLALTQSYLSNIIYRNLT 303 Query: 266 LAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRK 299 + + GF++ +HFS +F+ R+G++P YR++ Sbjct: 304 ITEVAMQCGFNNMAHFSRIFRHRYGVSPRAYRQQ 337 >UniRef50_A6W014 Helix-turn-helix-domain containing protein AraC type n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W014_MARMS Length = 306 Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 68/300 (22%), Positives = 129/300 (43%), Gaps = 26/300 (8%) Query: 10 QQWLSQINQVCGNFT-----------GRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSR 58 + + S+I +VCG F G + TER+ G DT + V + V + R Sbjct: 15 EMFTSEIRKVCGQFDVEPKSRTGMIDGGITTERF-GTFDT--------AIVDINSVQIKR 65 Query: 59 TWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSL-YWQESSKQI 117 + ++ +F+ + Q G + ++Q+E ++ GD+ L+D+ +P Y S+QI Sbjct: 66 DKKAIRQDPGEYFFLLVQDLGCSHVQQEENITKLRPGDMFLVDSVKPSIFQYDNHRSRQI 125 Query: 118 SLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMV 177 S +PR F + + D P+ H +L++ + + + A +++ Sbjct: 126 SFHIPRDEAMHRFGNIG-YGGINISRDDPLWLAIHSVLRKMITADDVHQQSLGDAFLSLI 184 Query: 178 CLLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADK 237 + ++P E+ K + LID + P +A +S R+L R F Sbjct: 185 SAYLHTTYNVSHIEP-NEQLLSKALALIDKHCLNASFSPRDVAYHLNISERTLQRHFQVL 243 Query: 238 GLVVAQYIRNRRLDFCADAI---RHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPG 294 G I N+RL+ + + +E + I + GF+D S+F F++++ TPG Sbjct: 244 GETPRHRIINKRLEHAHTRLCLRKDGGLNESVTDIALNSGFNDLSYFYREFRKKYHTTPG 303 >UniRef50_A3VDL3 Helix-turn-helix, AraC type n=1 Tax=Rhodobacterales bacterium HTCC2654 RepID=A3VDL3_9RHOB Length = 322 Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 62/236 (26%), Positives = 105/236 (44%), Gaps = 13/236 (5%) Query: 71 FYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYF 130 F Q+ G A + Q R+ I I +D ++P + + + S+ L ++ F Sbjct: 77 FLVSHQIEGHACVRQGGREAVIRPNQIFFIDTTQPFEIE-TDDIRTRSIYLDSHFWQEIF 135 Query: 131 PHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMV-CLLRPVLHQRES 189 P ++ A LD D M ++ E + + A+Q + CL + + Sbjct: 136 PERELYTATALDCDRGMGYTCKTMIDEMF---GMEWDIQDRAMQRLAGCLANLLAVSMVT 192 Query: 190 VQP-------RRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVA 242 P E+ Q++ I N+ + L IA E G+SVR ++ +F+ G + Sbjct: 193 SNPLERTGLGSNEQTLQRIHEAILRNLADPDLDCARIAEEVGLSVRQVHAVFSGTGSTLM 252 Query: 243 QYIRNRRLDFCADAIRHAADDEK-LAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 ++I RRL A + +A K ++ I F WGF++ +HFS FK FGM P +YR Sbjct: 253 RHIWKRRLSRIASDLANANLSHKPVSTIAFEWGFNEAAHFSRQFKAEFGMPPAKYR 308 >UniRef50_UPI0001B551BF AraC family transcriptional regulator n=1 Tax=Streptomyces sp. C RepID=UPI0001B551BF Length = 302 Score = 77.0 bits (188), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 35/99 (35%), Positives = 58/99 (58%) Query: 198 FQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAI 257 ++ I++++ + L PE IA +SVR L ++F + G V+Q++R RRLDFC + Sbjct: 183 LSRIRAYIEEHLMDPDLSPESIARAHHISVRYLQKLFQNDGSTVSQWVRERRLDFCRLEL 242 Query: 258 RHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEY 296 ++ +A + WGFS SHFS F+ +GM+P E+ Sbjct: 243 GRSSRRITMAAVAHRWGFSSPSHFSRTFRGAYGMSPSEW 281 >UniRef50_B0SW51 Transcriptional regulator, AraC family n=1 Tax=Caulobacter sp. K31 RepID=B0SW51_CAUSK Length = 338 Score = 76.6 bits (187), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 69/263 (26%), Positives = 112/263 (42%), Gaps = 19/263 (7%) Query: 44 LKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDAS 103 L T G + RT + + + F ++G + D G G++ + D S Sbjct: 63 LAFYVTETGGHTMFRTPEMIAADGRDHYIVQFNIAGSHTGDFDGVPFSAGPGEVGICDLS 122 Query: 104 RPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSH---------RL 154 RP L+ + K +S LPR ++ P + + LDA+ + + H RL Sbjct: 123 RPMLLH-STAVKVLSTFLPRAEVKAVAPDIE-LHGMVLDANRAGLLIEHLASVTRWFPRL 180 Query: 155 LQESMNNPALSETESEAALQAMVCLLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEIL 214 L E++ + E A M R RES R R + ++ N+ E L Sbjct: 181 LPETLPGITRATIELLGACLVMEAS-RADFGVRESPVLMRARAY------VEHNLLEPTL 233 Query: 215 RPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWG 274 P I+ G+S +LYR+F G V A Y+ +RRL A+ +++ I F G Sbjct: 234 NPAKISEALGVSRSTLYRLFEPLGGVTA-YVWDRRLHLARAALLDPKRARRISEIAFQCG 292 Query: 275 FSDQSHFSTVFKQRFGMTPGEYR 297 FS ++HFS F++ F + P + R Sbjct: 293 FSSEAHFSRSFRKAFNIRPSDLR 315 >UniRef50_Q0K404 Formamidase fused to an AraC-type HTH DNA-binding domain n=6 Tax=Proteobacteria RepID=Q0K404_RALEH Length = 796 Score = 76.6 bits (187), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 40/111 (36%), Positives = 60/111 (54%), Gaps = 1/111 (0%) Query: 190 VQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRR 249 + P R F +V + ID + E L IA + MS R L ++F G + Y+R R Sbjct: 210 MTPSRAAVFARVCSRIDARLAEPELSLAAIAADERMSARYLQKLFEKSGSSFSAYLRTSR 269 Query: 250 LDFC-ADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRK 299 L+ C AD H D ++ I + WGF+D SHFS F+++FG++P YR + Sbjct: 270 LERCRADLANHQYDKLSVSDICYRWGFNDPSHFSHAFREQFGISPRAYREQ 320 >UniRef50_C6QB43 Transcriptional regulator, AraC family n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QB43_9RHIZ Length = 328 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 65/257 (25%), Positives = 115/257 (44%), Gaps = 22/257 (8%) Query: 58 RTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCS-LYWQESS-K 115 R E+ S + Y + +SG+ ++ Q++ V GD+ L D++ P L ++S + Sbjct: 80 RNKSEISKSPEGSLYANYVISGRLVVTQNDVTVTAEKGDLVLYDSTLPVKHLKLGDTSFE 139 Query: 116 QISLLLPRTLLEQYFPHQKPICAERLDADLPMVQ----LSHRLLQESMNNPALSETESEA 171 ++ +P+ + + + ++D P+ LSH N + ++ E A Sbjct: 140 DLAFCIPKERIGRPDKTFDNLLVSKVDIIPPLASCFAFLSH--------NISSAQPEELA 191 Query: 172 ALQAMVCLLRPVLHQRES-------VQPRRERQFQKVVTLIDDNIREEILRPEWIAGETG 224 AL L P+ R + +++V ID I + L P A G Sbjct: 192 ALGGACAALLPISGGRSHEFRPDGIAEDASNHYARELVRFIDARIADAELCPSMAADNLG 251 Query: 225 MSVRSLYRMFADKGLVVAQYIRNRRLD-FCADAIRHAADDEKLAGIGFHWGFSDQSHFST 283 +SVR +++ FA G + Y+ +RRL+ D I + ++ + + WGF D S F Sbjct: 252 ISVRYVHKQFAMLGTTFSSYVTSRRLERISHDLISGVGANPPISVLAYRWGFRDLSTFIR 311 Query: 284 VFKQRFGMTPGEYRRKF 300 FK++FG +P EYR KF Sbjct: 312 CFKRKFGCSPREYRSKF 328 >UniRef50_D1SW59 Transcriptional regulator, AraC family n=5 Tax=Proteobacteria RepID=D1SW59_9BURK Length = 341 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 71/280 (25%), Positives = 120/280 (42%), Gaps = 32/280 (11%) Query: 44 LKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDAS 103 + L V+ S + + G +++F LSG A ++ RQV+ G G ++L + Sbjct: 69 VSLGDVSVSRLRYGAAVEIQPGPLESFFLVQMPLSGHARIDSGGRQVESGPGTASVLSPN 128 Query: 104 RPCSLYWQESSKQISLLLPRTLLEQYF------PHQKPI----------CAERLDADLPM 147 + W + Q+ L + R +E+ P +P+ CA P Sbjct: 129 DDTRMQWASGTDQLMLRIARAQVERTLVGHLGRPLDEPLRFELGFHWQDCA-------PW 181 Query: 148 VQLSHRLLQESMNNPALSETESEAA-LQAMVCLLRPVLHQR---ESVQPRRERQFQKVVT 203 L LL + P LS+ + A ++ + CL+ HQ E+ RR + V Sbjct: 182 RCLLSYLLDCATQYPDLSQNKLVVAQIEQLACLILLTSHQHNHSETAPARRSTILPRHVR 241 Query: 204 LIDDNIREEILRP---EWIAGETGMSVRSLYRMFAD-KGLVVAQYIRNRRLDFCADAIRH 259 D ++ P E +A G+SVRSLY F + G+ QY+R+ R++ + Sbjct: 242 RAQDYLQAHAHEPVCVEQLAEVAGVSVRSLYAGFKEFLGVSPMQYLRDLRMEHVRTELL- 300 Query: 260 AADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRK 299 + +AGI WGF+ FS +KQR+G +P + R+ Sbjct: 301 GGEASNVAGIALRWGFAHLGRFSNEYKQRYGESPSQTLRR 340 >UniRef50_C6QDE9 Transcriptional regulator, AraC family n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QDE9_9RHIZ Length = 326 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 62/261 (23%), Positives = 115/261 (44%), Gaps = 7/261 (2%) Query: 43 GLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDA 102 G L+ + +G++ RT +++ S ++ F Q+SG + Q+ R V + AGD+TL+D Sbjct: 57 GAFLTIASNNGLSTWRTSRQLAQSKNSVFICA-QISGSTRISQNGRDVVLKAGDLTLVDN 115 Query: 103 SRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQE-SMNN 161 + + K+ L + R E + R+D L +Q + Sbjct: 116 AAASTFECSTGCKEFLLEIERRNCEARLGRIGQLTTRRIDGSSGAGALVSNFIQLLPVQL 175 Query: 162 PALSETESEAALQAMVCLLRPVLHQRESVQPRRER----QFQKVVTLIDDNIREEILRPE 217 LS+T + + L+ L + + R ++ ++D N+ + + Sbjct: 176 ALLSDTAQKQISYQLTDLVALALTEGDGRSTARSSGRLISLLRLRAVVDANLTNPNVTCD 235 Query: 218 WIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAADDEK-LAGIGFHWGFS 276 +A G+SVR ++ + + + + RRL+ C DA+ A + ++ I + WGF Sbjct: 236 ELAAAAGISVRYANQLLEAEETSLQRLLFTRRLEKCQDALSDPAQAHRQISDIAYSWGFG 295 Query: 277 DQSHFSTVFKQRFGMTPGEYR 297 D SHF +FK G+TP YR Sbjct: 296 DVSHFGRLFKSTTGLTPRSYR 316 >UniRef50_B8IWN2 Transcriptional regulator, AraC family n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IWN2_METNO Length = 330 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 70/278 (25%), Positives = 119/278 (42%), Gaps = 14/278 (5%) Query: 30 ERYTGVLDTH-FAKGLKLSTVTTSGVNLSRTWQEVK-GSDDAWFYTVFQLSGQAIMEQDE 87 E + G L F +G L+ + + G L+RT ++ DA + + LSG +EQD Sbjct: 45 EAFAGTLRIRSFERG-TLADIASGGQVLTRTADRIRRAKSDAVLFNII-LSGHCRLEQDG 102 Query: 88 RQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQY-----FPHQKPICAERLD 142 RQ AG + L +++RP + + I +++ R LE+ F + +C+ +D Sbjct: 103 RQAVPTAGSLFLYESARPYHIETSPDFRTIVVMIDRGRLERSLGNLRFYTGRAMCS--VD 160 Query: 143 ADLPMVQLSHRLLQESMNN--PALSETESEAALQAMVCLLRPVLHQRESVQPRRERQFQK 200 + + L ++ A + T EA + ++ LR + R E + Sbjct: 161 TVARIAGSFWQTLSSQLDGVPDAAANTLIEAGIDVVIPALRSMAGDRAEGSEACELTVMR 220 Query: 201 VVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHA 260 I E L + IA G+S R L F +KGL + +R RL D + Sbjct: 221 ATAFIASAFHRESLTVDDIAAAAGVSTRRLQECFKEKGLTPMEQLRKHRLKHAHDRLNDG 280 Query: 261 -ADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 + + I GFSD +HFS F++ +G++P R Sbjct: 281 HCQNLSVLSIMSQSGFSDPAHFSRAFRKEYGISPSAAR 318 >UniRef50_C6XP47 Transcriptional regulator, AraC family n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XP47_HIRBI Length = 304 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 36/108 (33%), Positives = 63/108 (58%), Gaps = 1/108 (0%) Query: 194 RERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFC 253 R F ++ +++ + E L + +A ETG+S R L ++F+ + + Y+R RRL+ C Sbjct: 178 RAAHFDRICQMLESLLGEPELTLDRVARETGVSPRYLQKIFSQENYSFSMYVRERRLERC 237 Query: 254 -ADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKF 300 AD I + + + F WGFS +HFS F++RFG++P ++R+K Sbjct: 238 YADLISPLYSQQSITQVAFRWGFSSSAHFSRTFRERFGVSPRQHRQKL 285 >UniRef50_A1K9Y0 Putative AraC-like transcriptional regulator n=1 Tax=Azoarcus sp. BH72 RepID=A1K9Y0_AZOSB Length = 311 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 64/246 (26%), Positives = 114/246 (46%), Gaps = 6/246 (2%) Query: 56 LSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSK 115 ++R + +D ++ LSG ++Q+ + + A DA P SL E ++ Sbjct: 64 VTRQRSHLAAADGPAVKLLWLLSGSGRLQQNGGECSLQAERWLFYDAIHPYSLQLSEDAR 123 Query: 116 QISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN-PALSETESEAALQ 174 ISLL E++ + + + P +++ L+ +M L A L+ Sbjct: 124 FISLLYTGNSAERWMRLARDLGSAPRQTAGP-ARIALLALRGAMRERDGLDGLAQRALLE 182 Query: 175 AMVCLLRPVLHQRESVQPRRERQFQKVVT---LIDDNIREEILRPEWIAGETGMSVRSLY 231 +++ L L Q R+R ++V + ++ L P+ IA +S RSLY Sbjct: 183 SVLALTESALRTALPEQGGRQRDALRLVEARRFVLQHLANAELGPDDIARALHVSRRSLY 242 Query: 232 RMFADKGLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGM 291 +FA+ GL +++RN RL+ +A+ A D + I GF+D +HFS F++RFG+ Sbjct: 243 NLFAEAGLRPREFVRNLRLEKACEALARPAGD-SITTIALDHGFTDAAHFSRSFRERFGV 301 Query: 292 TPGEYR 297 +P YR Sbjct: 302 SPSAYR 307 >UniRef50_A7NK51 Transcriptional regulator, AraC family n=1 Tax=Roseiflexus castenholzii DSM 13941 RepID=A7NK51_ROSCS Length = 311 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 48/151 (31%), Positives = 73/151 (48%), Gaps = 1/151 (0%) Query: 150 LSHRLLQESMNNPALSETESEAALQAMVCLLRPVLHQRESVQPRRERQFQKVVTLIDDNI 209 LS +LQ + + + AL A++ LR + + RR + + ID + Sbjct: 156 LSALVLQAPLLSAGQRLILGDGALDAIIVWLRGEQTTDDHLSTRRRELLNAIYSYIDHRL 215 Query: 210 REEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFC-ADAIRHAADDEKLAG 268 + L P IA G+SVR L+ +FA G+ V ++I RRL+ ++ +R D + Sbjct: 216 EDYQLCPRVIADRFGVSVRYLHMLFAATGITVTRWITIRRLEVIRSELLRCGGDHGSIRD 275 Query: 269 IGFHWGFSDQSHFSTVFKQRFGMTPGEYRRK 299 I WGF D S FS VF+Q FG P Y R+ Sbjct: 276 IATRWGFHDLSRFSRVFRQHFGEPPSVYVRR 306 >UniRef50_B1LSU0 Transcriptional regulator, AraC family n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1LSU0_METRJ Length = 322 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 67/277 (24%), Positives = 117/277 (42%), Gaps = 8/277 (2%) Query: 32 YTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTV-FQLSGQAIMEQDERQV 90 + G L+ L ++ VT S V T ++ V L G+ QD+R Sbjct: 40 FAGTLEAAEVGPLLITRVTQSAVTTVATPDTIRRHGKYETLNVAITLKGRVYSAQDDRTA 99 Query: 91 QIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQL 150 GDI ++D RP ++ ++ + + LPR LE+ + + + AD + Sbjct: 100 IQNPGDIVVMD-RRPATMASDVDTQTLFVELPRESLERALGSTRRFTSLTIGADQVGTSM 158 Query: 151 SHRLLQESMNN-----PALSETESEAALQAMVCLLRPVLHQRESVQPRRERQFQKVVTLI 205 QE + N P +S + + +V + L + FQ+ + I Sbjct: 159 VTTFFQELVRNAGRLTPDMSNRMASVGVDLIVASIAERLAHDTPKNIQGVLIFQRALAHI 218 Query: 206 DDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAADDEK 265 + ++ + L P +A G+S+R L +F ++ +A +I RRL+ A + Sbjct: 219 EAHLGDLNLDPARLAAAVGVSLRHLQALFREQDRNIADWIWRRRLEIAAQRLADPGFAHL 278 Query: 266 LAG-IGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKFR 301 G + + GF QSHFS FK +G++P EYR + R Sbjct: 279 AVGELAYSCGFCTQSHFSRRFKDSYGISPSEYRWRNR 315 >UniRef50_A1VJU8 Transcriptional regulator, AraC family n=1 Tax=Polaromonas naphthalenivorans CJ2 RepID=A1VJU8_POLNA Length = 348 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 69/275 (25%), Positives = 114/275 (41%), Gaps = 6/275 (2%) Query: 29 TERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDER 88 + ++G +D G L +T S R +E + V Q+ + EQ ER Sbjct: 49 AQAFSGRIDYGDLAGTGLCRMTASPHRFQRALREGASLAASPLILVIQVKNSSYFEQRER 108 Query: 89 QVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMV 148 + GD +LD RP +QI + + R A+R D Sbjct: 109 SGMLSPGDWCVLDTYRPFGWNSASGCEQIIMTIQRPADSGLGDLIARGAAQRCDGKTGAA 168 Query: 149 QLSHRLLQESMNNPALSETESEAALQAMVCLL--RPVLHQRESVQP--RRERQFQKVVTL 204 ++ ++ E M S +L + + + Q E+ P R+ Q ++ Sbjct: 169 RILQAMVSEVMGQIHHLAPYSAGSLASALTATAWNALQEQLEAPAPILLRDTQCSRLKAW 228 Query: 205 IDDNIREEILRPEWIAGETGMSVRSLYRMFA-DKGLVVAQYIRNRRLDFCADAIRHAADD 263 I+ + E L + IA MS RS++R F+ D V+ Y+ RR+ CA A+++ + Sbjct: 229 IETRLAEPDLSVDTIAQGCRMSARSVHRAFSSDPTGSVSSYLWQRRVVQCAAALKNPQEM 288 Query: 264 EK-LAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 + + I WGFS SHFS VF+ G++P YR Sbjct: 289 HRSITDIALSWGFSSSSHFSRVFRSTLGVSPRSYR 323 >UniRef50_Q0RZY7 Transcriptional regulator, AraC family protein n=1 Tax=Rhodococcus jostii RHA1 RepID=Q0RZY7_RHOSR Length = 310 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 81/286 (28%), Positives = 132/286 (46%), Gaps = 30/286 (10%) Query: 30 ERYTGVLDT-HFAKGLKLSTVTTSGVNLSRTWQEVK-GSDDAWFYTVFQLSGQAIMEQDE 87 +R+ G LD +G+ L+ V T ++ RT + + G DD F + +SG + +D Sbjct: 30 DRFRGALDQRELGRGVSLTRVETDPSHVLRTPRLTRDGCDDVLF--LMHVSGDGAVVKDG 87 Query: 88 RQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLL-----EQYFPHQKPICAERLD 142 +Q + +G +L AS P L + +S+++ L PR LL EQ H+ P D Sbjct: 88 QQTPMPSGYGSLHAASDPYELKFATASREVVLQTPRRLLPSREFEQL--HRGPTGIAPQD 145 Query: 143 ADLPMV-QLSHRLLQESMNNPALSETESEAALQAMVCLLRPVLHQR------ESVQPRRE 195 + ++ + LL S + P E Q V LL VLH R ++V P E Sbjct: 146 PAMRVLWSFTQELLTVSNDLPTPLREEMG---QTAVDLLLSVLHHRSLEESAKAVGP--E 200 Query: 196 RQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCAD 255 +Q + LI +N + E A + +S+R +F G+ A ++R+ R+ A+ Sbjct: 201 AIYQSIKRLIRENACDPRFTIEVAAEQHHISLRYTQTLFTRSGMSPATFLRSERI---AN 257 Query: 256 AIRHAAD----DEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 A R AD D + + + GF D + F FK+ G+TPG +R Sbjct: 258 AQRLLADPRQSDIPVESVAYRSGFVDVNTFIRAFKRAVGVTPGVWR 303 >UniRef50_C9Z9W8 Putative DNA-binding protein n=1 Tax=Streptomyces scabiei 87.22 RepID=C9Z9W8_STRSW Length = 314 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 62/262 (23%), Positives = 112/262 (42%), Gaps = 20/262 (7%) Query: 44 LKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDAS 103 + L+ V + + R+ V+ L G+A+ +Q R+ + GD+ + DA Sbjct: 60 VHLARVCATAHVVERSADLVERRPTGSVAVYVSLRGEALFQQAGRRQVVRPGDVVVCDAD 119 Query: 104 RPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPA 163 + + ++++ + R L + +P+ +A+ P + RL+ S+ A Sbjct: 120 GSFVRGFGQGLDELAVRVHREALPERAALGEPLIVRSSEAN-PYGRALARLVGRSVGGEA 178 Query: 164 LSETESEAALQAMVCLL------RPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPE 217 + +A + L+ RPV+H+ I++ +R+ L Sbjct: 179 AIRPDEQAIVDLASALVSGGATRRPVVHR------------ALACARIEEQLRDPRLSAP 226 Query: 218 WIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHA-ADDEKLAGIGFHWGFS 276 +A G+SVR L R+FA+ G +Y+ RRL+ + A + A + GFS Sbjct: 227 EVAEAVGISVRQLTRVFAEAGTTFPRYVLGRRLELAYGVLTGPDAAQSRTASVAAMCGFS 286 Query: 277 DQSHFSTVFKQRFGMTPGEYRR 298 +HFS F RFG+T GE RR Sbjct: 287 SVAHFSQTFHARFGVTAGELRR 308 >UniRef50_A9GLT2 Transcriptional regulator, AraC family n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GLT2_SORC5 Length = 278 Score = 74.7 bits (182), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 62/232 (26%), Positives = 107/232 (46%), Gaps = 7/232 (3%) Query: 73 TVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQY--- 129 + Q+ G ++EQ ++ G + +LD S+ SS L R + Sbjct: 45 VLLQIEGGCVIEQSAAVCELTPGSMVILDDSKRTVRTATGSSHAQRWLFARVPSRSFGGG 104 Query: 130 FPHQKPICAERLDADLPMVQLSHRL-LQESMNNPALSETESEAALQAMVCLLRPVLHQRE 188 + P+ + D + +L H L L + P ++ + EA L A+ R ++ Sbjct: 105 MFERAPL--RVMTKDNAVDRLLHDLVLNLWSSAPHINGVQQEAGLAALDASARMSSAAQD 162 Query: 189 SVQPRR-ERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRN 247 + + R + ++ + I+ + + L E +A +S R L +FA G V +IR Sbjct: 163 ARRTARVHVRVERAIEFIERELADPDLTAERVASAQRVSRRHLDGLFAASGSSVEAWIRE 222 Query: 248 RRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRK 299 RRL A+A++ + D KL + GFS QS+FS F +RFGMTP E+R++ Sbjct: 223 RRLQRAAEALKRGSPDTKLLAVAVESGFSSQSYFSRAFARRFGMTPTEWRKR 274 >UniRef50_A5VPA4 Transcriptional regulator, AraC family n=41 Tax=Brucellaceae RepID=A5VPA4_BRUO2 Length = 356 Score = 74.7 bits (182), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 75/291 (25%), Positives = 129/291 (44%), Gaps = 18/291 (6%) Query: 13 LSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFY 72 +S +Q F G L ++++ L + + T++G N RT + SD + Sbjct: 32 MSSDDQSGKGFKGTLRSQQFGTCL---------IGSATSNGQNYQRTPSIIAQSDMDHYV 82 Query: 73 TVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPH 132 ++G+ + + V GDI +LD + S E+ ++I++++ R LE+ Sbjct: 83 LQAMIAGRMTGDFNGTNVSAKPGDIVILDLLQTVS-SSVEAGERITIVIQRGELEKLVGW 141 Query: 133 QKPICAERLDADLPMVQLSHRLLQESMNNPA-LSETESEAALQAMVCLLRPVLHQRES-- 189 + + L + P +L L+ A L E+ AA +AM+ LL + +E Sbjct: 142 RN-LHGMVLPGEAPTTRLLFEYLRGLDAVAAELPPNEALAAQEAMLTLLSASITSKEEEA 200 Query: 190 --VQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRN 247 P +++T ID+N+ +L P I +S LYR F G VA+ IR+ Sbjct: 201 IENTPANLPMRHRIITYIDENLTNPLLGPHSIMQHFHLSRSHLYRAFEPDG-GVAKVIRD 259 Query: 248 RRLDFCADA-IRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 +RLD I L I + GF+D++ F+ FK RF ++P E R Sbjct: 260 KRLDLAYRILIDRKGKPTLLKEIAYCCGFNDRTQFTKAFKARFELSPKEAR 310 >UniRef50_D1TAE4 AraC family transcriptional regulator n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1TAE4_9BURK Length = 326 Score = 74.7 bits (182), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 66/283 (23%), Positives = 122/283 (43%), Gaps = 16/283 (5%) Query: 26 RLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQ 85 R L + + G +DT+ A G+ + T V +R+ + S D VF ++ + E Sbjct: 39 RQLADGFRGSIDTYRAGGMAFTDCRTDPVAQTRSVARI--STDNVRQIVFHVAVEGTFET 96 Query: 86 -----DERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAER 140 +R + LD ++P + + ++L LPR L++ P + I Sbjct: 97 TTGLYPKRVALQTRPSVLALDMNQPMQMTLGPC-RLVALFLPRHLIDPVLPEAESIHGRM 155 Query: 141 LDADLPMVQLSHRLLQESMNN-PALSETESEAALQAMVCLLRPVLHQRESVQP-----RR 194 ++ P+ +L L + P + ++ AL L+ + + R Sbjct: 156 IEYQTPLARLIPAHLDDLCRRLPTMDARAAQEALHTCGLLMAAAFGKETGLTGGARAVAR 215 Query: 195 ERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCA 254 F ID N+ + L + + + +S +LYR+F +G + A YIRNRRL A Sbjct: 216 TAMFAAARRYIDANLGQPDLTVDSVLAMSQLSRPTLYRLFEPEGGLHA-YIRNRRLREAA 274 Query: 255 DAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 D + H + + + WGF+ S F+ F++ + M+PG++R Sbjct: 275 DEL-HRHPRRPVIDVAYGWGFNSASDFNRAFRRAYDMSPGDFR 316 >UniRef50_Q1N9N6 Transcriptional regulator, AraC family protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1N9N6_9SPHN Length = 330 Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 59/219 (26%), Positives = 101/219 (46%), Gaps = 9/219 (4%) Query: 87 ERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLP 146 + V + AGD+ + D ++ + + IS+L+PR L + + L A+ Sbjct: 84 DHSVVVTAGDVVIFDLAQGLKTRATDFTN-ISVLIPRPFLAHHCDDASRLHGHVLPANGA 142 Query: 147 MVQLSHRLLQESMNN-PALSETESEAALQAMVCLLRPVLHQR-----ESVQPRRERQFQK 200 + + ++ ++ P L+ +++ A ++ V L+ +L + P F+K Sbjct: 143 IAAMLGSYMRALVDRLPTLTPGDAQVAARSTVALVTTMLADQGGGGFAPTAPAPLSPFRK 202 Query: 201 VVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHA 260 V ID +RE L +A GMS +LYR F G +A YIR RRL A + Sbjct: 203 VAQEIDRRLREPSLDAASLAQSLGMSRATLYRTFQPVG-GIADYIRRRRLAVAAIILSSP 261 Query: 261 ADDE-KLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRR 298 A+ K+ I GF+ +S FS F+ FG+ PG+ R+ Sbjct: 262 ANQRRKIGEIARDCGFASESAFSRAFRSAFGIAPGQARQ 300 >UniRef50_UPI0001B557E7 AraC family transcription regulator n=1 Tax=Streptomyces sp. C RepID=UPI0001B557E7 Length = 347 Score = 74.3 bits (181), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 71/271 (26%), Positives = 114/271 (42%), Gaps = 26/271 (9%) Query: 44 LKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDAS 103 ++LS VT S V+ RT V+ D G + Q + + +G + L D S Sbjct: 53 VRLSAVTCSPVSSRRTPTHVRQGDPEHLQLALLTRGAVRISQRGSESVV-SGGLVLTDTS 111 Query: 104 RPC-SLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDA----DLPMVQLSHRLLQES 158 RP + E+ + + +PR L + ++RLD +LP S +L Sbjct: 112 RPSEAAAADETLTSVVVQIPRQALA--------LGSDRLDGLLARNLPAGSGSGAILAGF 163 Query: 159 MNN----PALSETESEAALQAMVCLLRPVLHQRESVQP-------RRERQFQKVVTLIDD 207 M + E L A+ L R+ P R Q++ +++ Sbjct: 164 MRSLLTQAPHCRPEELRGLGAVTLDLATAFLARQLGDPGAAPARARARETLQRIHRFVEN 223 Query: 208 NIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFC-ADAIRHAADDEKL 266 N+ + L P+ IA MS+R L+ +F D+ L VA IR RL+ +D R + Sbjct: 224 NLGDPDLTPQVIADRHNMSLRHLHALFGDQPLTVAALIRRSRLERARSDLARAELGGHPV 283 Query: 267 AGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 I WGF+ + FS F+Q +G+TP E+R Sbjct: 284 QAIAARWGFASATGFSRAFRQAYGLTPTEHR 314 >UniRef50_A9DHH2 Transcriptional Regulator, AraC family protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9DHH2_9RHIZ Length = 250 Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 65/252 (25%), Positives = 115/252 (45%), Gaps = 21/252 (8%) Query: 60 WQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISL 119 ++++ DD F + G+ +EQ V++ AG + DASRP S E ++ +L Sbjct: 1 MRDIRSGDDGCFGVLMVRKGRERVEQGGEVVELSAGSTFIWDASRPISFEVLEPLEKCTL 60 Query: 120 LLPRTLLEQYFP-HQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVC 178 L+ R +L++ + P+ LD+ L H + S P ++ ++ ++ Sbjct: 61 LVSRDMLKRETGLSELPVGV--LDSSRGFGALLHE--RASGLGPVFADFDARDQVRLGSA 116 Query: 179 LLRPVLHQRE------SVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYR 232 +L + H E +V P R Q++ +ID + L +A G+S+R L++ Sbjct: 117 MLMDLTHAVEGRLHPVAVAP-RALLVQRINRIIDTRFADPGLDLSRVAESAGISLRYLHQ 175 Query: 233 MFADKGLVVAQYIRNRRLDFCADAIRHAADDEKLAGI-----GFHWGFSDQSHFSTVFKQ 287 + + I RRL +A+RHA + LA + GF GFS +H S F+ Sbjct: 176 VLEGAAETGSNRIVRRRL----EALRHALAEPALASVSITQLGFASGFSSVTHISRTFRG 231 Query: 288 RFGMTPGEYRRK 299 +G TP +R+K Sbjct: 232 HYGETPSAFRKK 243 >UniRef50_B2HDE9 Transcriptional regulatory protein n=1 Tax=Mycobacterium marinum M RepID=B2HDE9_MYCMM Length = 356 Score = 73.9 bits (180), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 62/256 (24%), Positives = 107/256 (41%), Gaps = 16/256 (6%) Query: 54 VNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQES 113 V + RT + + S + L+G+ ++ QD + + D + D +RP SL + + Sbjct: 90 VLVRRTAKLINHSAPDYLKVAMPLNGKCVVTQDGHEETLAPRDFAVYDTTRPYSLAFSGA 149 Query: 114 SKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMN-----NPALSETE 168 + + ++ PR + + A RL+ + L E N N A + Sbjct: 150 YRALVIMFPRDQVRLSSAELTRLTARRLNGRDGLGAPVSAFLAEMGNRLDDANTAGTLYL 209 Query: 169 SEAALQAMVCLLRPVLHQRESVQPRRERQ--FQKVVTLIDDNIREEILRPEWIAGETGMS 226 ++A L + L R + ++ I+ + + L IA +S Sbjct: 210 ADAVLDMLAASFAAQLSDETGGNAARGTRGLALRIRAFIESRLGDPGLDVSTIAAAHHVS 269 Query: 227 VRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAADDEKLA-----GIGFHWGFSDQSHF 281 VR L ++F +G V +IR+RR++ C R +D +LA I WG + SHF Sbjct: 270 VRYLQKLFESQGQTVTGWIRDRRIEHC----RRDLEDHRLAEVPVSSIAARWGLVNASHF 325 Query: 282 STVFKQRFGMTPGEYR 297 S +FK G +P EYR Sbjct: 326 SRLFKAVHGSSPAEYR 341 >UniRef50_A1VU02 Transcriptional regulator, AraC family n=4 Tax=Comamonadaceae RepID=A1VU02_POLNA Length = 340 Score = 73.9 bits (180), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 67/280 (23%), Positives = 126/280 (45%), Gaps = 21/280 (7%) Query: 32 YTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQ 91 + G + T A + ++ + + + R+ + SD ++ + G A +EQ RQ Sbjct: 42 FDGHIATSHAGDVVMTRLEANRHRVMRSPGLARTSDMSYLKIIAPWQGNAALEQQGRQTW 101 Query: 92 IGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLP-MVQL 150 + G + D + + E S + ++LPR L + R+DA + +V Sbjct: 102 VRPGGWAIYDTTGSYEVANPERSLHLIVMLPREQLTER--------GLRIDALMGRLVGG 153 Query: 151 SH---RLLQESMNN-----PALSETESEAALQAMVCLLRPVLHQ---RESVQPRRERQFQ 199 S R+ E+M + P ++ + A ++ L+R L + R + ++E Sbjct: 154 SSGISRVALETMRSIFQELPLMTPEAARGAGDLVIDLVRLSLQELAGRTTATTQQEALKD 213 Query: 200 KVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRH 259 ++ I ++R+ L + IA S R L+ FAD+ + YI RRL C +++ Sbjct: 214 RIRDFIGQHLRDPDLSLDRIAQVLNCSKRHLHNAFADEEDTLGHYILRRRLQACMRDLKN 273 Query: 260 AAD-DEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRR 298 + I F WGF++ +HFS VF++ G++P E+RR Sbjct: 274 PVHLPRTITDIAFSWGFNNGTHFSRVFREHAGLSPSEFRR 313 >UniRef50_A1BAD0 Transcriptional regulator, AraC family n=1 Tax=Paracoccus denitrificans PD1222 RepID=A1BAD0_PARDP Length = 318 Score = 73.9 bits (180), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 69/278 (24%), Positives = 116/278 (41%), Gaps = 13/278 (4%) Query: 32 YTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVK-GSDDAWFYTVFQLSGQAIMEQDERQV 90 + G L+ A + LS + T R ++ G + + T+ L+ + Q R + Sbjct: 41 FQGRLERRSAGPVSLSRLRTEPARYERVPGLIRQGEAEEYLVTIPSLA-PVLFRQLGRDI 99 Query: 91 QIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQL 150 G + P +Q + + + + R L + +CA D + L Sbjct: 100 TCAPGGFIIERGDEPYRFAYQARNDLLVMKIARGALAERLRQPDRLCATVFDGRDGLGGL 159 Query: 151 SHRLLQESMNNPALSETESEAAL--QAMVCLLRPVL-HQRES----VQPRRERQFQKVVT 203 ++ + ALS+ E A + + ++ LL L HQ E+ R ++ Sbjct: 160 FAETVRRAH---ALSDAEGAADVLGRHLIELLALALDHQAETDGGAATVVRAAHLKRAQD 216 Query: 204 LIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAADD 263 I N+ + L P +A G+S R L+ +F D VAQ+IR RL D ++ D Sbjct: 217 AILRNLTDPELSPGTVAAACGISKRYLHDLFGDTDATVAQFIREARLKAARDMLQMPGD- 275 Query: 264 EKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKFR 301 LA I + +GF DQ+ FS +F+ FG +P YR R Sbjct: 276 LSLAAIAYRFGFGDQAQFSRLFRAMFGQSPSSYRAACR 313 >UniRef50_A3KKG5 Putative transcriptional regulator n=1 Tax=Streptomyces ambofaciens ATCC 23877 RepID=A3KKG5_STRAM Length = 338 Score = 73.9 bits (180), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 67/264 (25%), Positives = 113/264 (42%), Gaps = 10/264 (3%) Query: 44 LKLSTVTTSGVNLSRTWQEV---KGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLL 100 ++L V L+RT + +G+ +A+ SG A + QD R + GD+ Sbjct: 52 VRLCAVEGDAQRLTRTSAHIAHARGASEAFLVIGVLTSGTATLMQDGRHASVDEGDLMFY 111 Query: 101 DASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMN 160 D SRP ++ +LLPR L + + + A + + L ++ Sbjct: 112 DTSRPYAVDHPGRFACSLVLLPRGALLLPDEQVRRVTGSAVTASRGVAAVLAPFLASLVS 171 Query: 161 NPALSETESEAALQAMVCLLRPVL------HQRESVQPRRERQFQKVVTLIDDNIREEIL 214 + A L A V L L H RER + + ID ++ + L Sbjct: 172 SAPACPPAVAAHLAAAVVDLATTLVADRTAHALPGPDTGRERLVRCIREHIDHHLPDPAL 231 Query: 215 RPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCA-DAIRHAADDEKLAGIGFHW 273 P+ +A +SVR L+R+F ++G+ V + I+ RRL+ A + R +A + W Sbjct: 232 SPQSVARAHHISVRYLHRLFEEEGVTVRRLIQRRRLEESARELARGGTTAPTVASVARRW 291 Query: 274 GFSDQSHFSTVFKQRFGMTPGEYR 297 GF +HFS F+ +G +P E+R Sbjct: 292 GFVSPAHFSRAFRGLYGHSPREWR 315 >UniRef50_Q38ZW3 Transcriptional regulator, AraC family n=2 Tax=Burkholderia cepacia complex RepID=Q38ZW3_BURS3 Length = 324 Score = 73.6 bits (179), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 59/245 (24%), Positives = 108/245 (44%), Gaps = 5/245 (2%) Query: 58 RTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQI 117 RT + + +GQ QD +Q G GD+ L D S P + Sbjct: 72 RTSHNIHADQRDAVFICLMHAGQGYTFQDVDCMQHGPGDLVLYDTSMPYGHGFPADMAMT 131 Query: 118 SLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETES-EAALQAM 176 L +PR + E + ++D D + + R + + P +++ E A+ Sbjct: 132 VLDVPRDVFEARVGPWRYRSLVKIDRDDGVASWAVRQVYALLAAPPEPTSDARERRAAAI 191 Query: 177 VCLLRPVLHQRES-VQPRRE--RQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRM 233 + L++ +L R+ P + + ID ++ ++ L + ++ +S R L R+ Sbjct: 192 LDLVQSMLRLRDGDASPTKSTVHTLSRAKAFIDSHLADDDLDSQSVSRAINLSPRQLARV 251 Query: 234 FADKGLVVAQYIRNRRLDFC-ADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMT 292 F +G+ + +YI RRL+ C AD + ++ I F WGF++ +HFS ++ RFG T Sbjct: 252 FEIEGMPLTRYILARRLERCRADLRDRSLKHLTVSEIAFRWGFNNSAHFSRSYRARFGET 311 Query: 293 PGEYR 297 P + R Sbjct: 312 PSDTR 316 >UniRef50_B1M2F8 Transcriptional regulator, AraC family n=2 Tax=Methylobacterium RepID=B1M2F8_METRJ Length = 351 Score = 73.6 bits (179), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 69/265 (26%), Positives = 117/265 (44%), Gaps = 14/265 (5%) Query: 44 LKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDAS 103 L + V L RT + + F GQ+ +E D+ + + D + Sbjct: 74 LLVGDVVAPAHTLVRTREMIGQQGLDHILLQFYRRGQSRVETDQGTGPVNEVQCIVFDLA 133 Query: 104 RPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADL-PMVQLSHRLLQESMN-N 161 +P + + ++++PR LLE+ H + LD D P +L H + + Sbjct: 134 QPVRIV-AGAVDATNVVIPRALLEKQGCHPDALHGRSLDHDGDPFGRLVHNFVANVVACG 192 Query: 162 PALSETESEAALQAMVCLLRPVLHQRESVQPRRERQFQ-KVVTLIDDNIREEILRPEWIA 220 L E+ AA A+ L L +E +P + + + +V L++ + L P IA Sbjct: 193 DLLDRREALAASAAITQLCASWLRGQEEGRPAQHQDVRIRVRRLVEAELGNPKLTPALIA 252 Query: 221 GETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAADDE-----KLAGIGFHWGF 275 G+S +LYR+FA G+V YIR+RRL A+R D+ +++ + F GF Sbjct: 253 TRLGLSRSTLYRLFAPNGIVA--YIRDRRL---MAAMRMLVRDDAPKPLRVSQVAFAVGF 307 Query: 276 SDQSHFSTVFKQRFGMTPGEYRRKF 300 SD+ F FK+RFG P + ++ Sbjct: 308 SDERTFRRAFKRRFGFIPSDASQRL 332 >UniRef50_A5W3Z7 Transcriptional regulator, AraC family n=5 Tax=Pseudomonadales RepID=A5W3Z7_PSEP1 Length = 313 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 72/275 (26%), Positives = 123/275 (44%), Gaps = 9/275 (3%) Query: 32 YTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKG--SDDAWFYTVFQLSGQAIMEQDERQ 89 + G L + L ++T+++ + R+ Q ++ ++D W L G +EQ R+ Sbjct: 42 FEGALQVNGIGPLDVTTLSSPLHHWVRSEQHLRSDPAEDIWLGVT--LDGYGEIEQHNRK 99 Query: 90 VQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLP-MV 148 ++ AG++ L DA++P + + + +PR LL Q PH I A L+ P ++ Sbjct: 100 ARLTAGNVFLYDATQPFRFSLGGTENHL-IRIPRPLLAQRVPHIADITALVLEEGRPGVI 158 Query: 149 QLSHRLLQESMNNPAL-SETESEAALQAMVCLLRPVLHQRESVQPRRERQ-FQKVVTLID 206 L + Q + + P L E S +V LL L ++ RE + +++ I Sbjct: 159 PLRQMIGQAASSAPLLQDEGVSRRYSNTIVDLLVLSLELQDLKTTHRELDLYGRIMNYIQ 218 Query: 207 DNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAADDEKL 266 ++ E L E IA +S R++ R FA I RL+ AI + Sbjct: 219 RHLTEPELSIESIALAHHVSTRTVTRAFARHQKSPVAEIWKERLNASRAAIE-CGQVRSV 277 Query: 267 AGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKFR 301 + +GFSD SHFS F++ FG+ P R+ R Sbjct: 278 SQAALEYGFSDFSHFSHAFRKAFGVAPHSLLRRSR 312 >UniRef50_C5ALA2 Transcriptional regulator, AraC family protein n=1 Tax=Burkholderia glumae BGR1 RepID=C5ALA2_BURGB Length = 344 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 76/310 (24%), Positives = 133/310 (42%), Gaps = 20/310 (6%) Query: 5 VDNEFQQW---LSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQ 61 V + F W LS I V + T + + G L + + L TS R+ Sbjct: 11 VSDRFAIWREALSNIFDVSLHQTAP--GDTFFGSLTAYHLGPVLLGECRTSAQRYLRSPV 68 Query: 62 EVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLL 121 ++ D + +SG+ + + +++LD SRP I+LL+ Sbjct: 69 MIRRDDIDHYLIQLYISGEIHGLYGSKPTHLTPMTLSVLDMSRPVD-SLGTPLHNINLLI 127 Query: 122 PRTLLEQYFPHQKPICAERLDADLPMVQLS-HRLLQESMNNPALSETESEAALQAMVCLL 180 PR LL + +D L+ L+ P L ++ A + V L+ Sbjct: 128 PRDLLAPLIAQPNHMHGRIWTSDAATTALAASHLVTLFRLVPTLDSSQLSAVVDVTVNLI 187 Query: 181 RPVL----HQRESVQPRRER-QFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFA 235 L RE++ P+R+ + V I +IR+ L P ++ G+S LYR+F Sbjct: 188 AICLGSGEQAREALLPQRDAISLRMVRRYIRRHIRDMTLSPASLSTALGISRSRLYRLFK 247 Query: 236 DKGLVVAQYIRNRRLDFCADAIRHAADDE----KLAGIGFHWGFSDQSHFSTVFKQRFGM 291 +G V +YIR+ R+ A++ +D + ++ I + GF++++HFS F+++FGM Sbjct: 248 GEG-GVHEYIRSSRMRL---ALKEISDSKYHHRRIGDIAYEIGFTNEAHFSRSFREKFGM 303 Query: 292 TPGEYRRKFR 301 +P E R R Sbjct: 304 SPKEAREGAR 313 >UniRef50_Q2T6Z9 Transcriptional regulator, araC family n=39 Tax=pseudomallei group RepID=Q2T6Z9_BURTA Length = 395 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 66/217 (30%), Positives = 91/217 (41%), Gaps = 11/217 (5%) Query: 94 AGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHR 153 A D+ LLD RP + W E +L LPR + + Q + A A L +L+ Sbjct: 154 ANDLFLLDGGRPMRVRWDEPCFS-ALRLPRASVARTL-GQAAMDASPSSASLQAARLAPF 211 Query: 154 LLQE----SMNNPALSETESEAALQAMVCLLRPVLHQRESVQ-----PRRERQFQKVVTL 204 L E PALS E + L L R +L S + P R + Q Sbjct: 212 LAAELALIGGRGPALSSDELDYVLARAADLGRALLQAALSARVRRGAPARADRLQAAYRY 271 Query: 205 IDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAADDE 264 I+ ++ L PE IA S LYR+F + V +R+ RL+ + Sbjct: 272 IEQHLHLPTLTPERIADAIHCSRTQLYRLFRHESQTVKAALRDARLNRSLGYLERPELAL 331 Query: 265 KLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKFR 301 + I GF DQS F +F++RFG TPGE RR R Sbjct: 332 SIGEIAHACGFPDQSTFGKLFRRRFGRTPGEVRRAAR 368 >UniRef50_C3JZK1 AraC family regulatory protein n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3JZK1_PSEFS Length = 332 Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 74/288 (25%), Positives = 124/288 (43%), Gaps = 29/288 (10%) Query: 21 GNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQ 80 GNF GRL Y + F + +T S SR + D + Q++G Sbjct: 50 GNFQGRL---EYGDLGQLRFCR------MTASAHRYSRHLSKALDVVDTPRMLILQVAGV 100 Query: 81 AIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAER 140 + EQ ++ + D+ L+D +P S+ + + LL F + Sbjct: 101 SHFEQGQQSSTVAPDDMLLVDCGKPFSVTSTQGCEHFILL---------FQGAAGQLTQT 151 Query: 141 LDADLPMVQLSHRLLQESMNN-----PALSETESEAALQAMVCLLRPVL-HQRESVQPRR 194 D L R+L +++ P L+ + ++ LL L ++++ Q Sbjct: 152 GDMHLSGRNGLGRMLMHLISDAYHQYPLLNSQSAGLIGDSIAGLLNNALKNKQDEKQLDH 211 Query: 195 ERQF---QKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADK-GLVVAQYIRNRRL 250 + +F ++ I+ ++ + L E IA SVRSL+R F D+ G V++YI RRL Sbjct: 212 DFRFFKQNRLKAYIERHLADRDLSIERIANAEQCSVRSLHRAFQDELGCSVSEYIWQRRL 271 Query: 251 DFCADAIRHAADDEK-LAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 CA+ +R+ + L I + WG+ SHFS FK FGM+P +R Sbjct: 272 SRCAEDLRNREQTHRSLTEIAYAWGYGSSSHFSRHFKSTFGMSPRLFR 319 >UniRef50_Q4KD45 Transcriptional regulator, AraC family n=4 Tax=Pseudomonas RepID=Q4KD45_PSEF5 Length = 323 Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 63/278 (22%), Positives = 110/278 (39%), Gaps = 36/278 (12%) Query: 41 AKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLL 100 + L LS + +S + SR+ +V A + + + EQD R++ G Sbjct: 51 SSALALSRLRSSRLGYSRSKAQVSNDTQACYLVTIPRRHEVLFEQDGRELHCRPGSFIFE 110 Query: 101 DASRPCSLYWQESSKQISLLLPRTLL-------EQY--------------FPHQKPICAE 139 P + + LP L E+Y F Q +CA Sbjct: 111 RGDAPYRFRYASDNDLWVFKLPEQALHGQLRGAERYTRFCFDARRGLGRIFADQLAMCAA 170 Query: 140 RLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPVLHQRESVQPRRERQFQ 199 R D P + H LL++++ L+ + E L + Q Sbjct: 171 RFDECAPAAR--HMLLEQALATLLLTLRQDERVLSSES-------------SSLAALHLQ 215 Query: 200 KVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRH 259 ++ + ++ ++ L P IA G+S+R L+++FAD + ++IR +RL +R Sbjct: 216 RIESYVEQHLGSAELNPRQIASACGISLRYLHKLFADSPFSLGEWIRQQRLCAVHRQLRD 275 Query: 260 AADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 A + + WGF+DQ+ F+ F+Q+FG T E R Sbjct: 276 AHCRLSIGELAARWGFADQAQFARHFRQQFGCTASEVR 313 >UniRef50_Q71VU1 Transcriptional regulator, AraC family n=21 Tax=Listeria RepID=Q71VU1_LISMF Length = 780 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 66/237 (27%), Positives = 108/237 (45%), Gaps = 16/237 (6%) Query: 74 VFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLL----EQY 129 VF +SGQ ++ E++ + GD+ +LD + ++ E + I+L + T E Y Sbjct: 28 VFAISGQITIKVSEQKFYLQEGDVLVLDRNTFYTIEGNEDNLFINLTISDTFFAHYYEDY 87 Query: 130 FPHQKPICAERLDADLPMVQLSHR-----LLQESMNNPALSETESEAALQAMVCLLRPVL 184 F H ++ D V S R LL S ++ E+++AL ++ LL L Sbjct: 88 FQHSFKFFSKESDPGRERVVGSLRKSVSELLIASATKKRANKLEAQSALFQILLLLTRFL 147 Query: 185 HQRESVQPRRE---RQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADK-GLV 240 + R+E ++ +++ +++ E + E+ A + +S L R F GL Sbjct: 148 KKGIPSSARKEVNDKRISRIIREVEERFDEALSLREF-AQKEFLSEAYLSRYFKKTTGLG 206 Query: 241 VAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 QY+ RL + H+A E + I GFS Q HFS VFK F +TP EYR Sbjct: 207 FLQYLTEVRLKHAIQDLLHSA--ESITEIALKNGFSSQKHFSEVFKFHFELTPSEYR 261 >UniRef50_C4WP68 Helix-turn-helix domain-containing protein n=2 Tax=Ochrobactrum intermedium LMG 3301 RepID=C4WP68_9RHIZ Length = 376 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 76/273 (27%), Positives = 123/273 (45%), Gaps = 10/273 (3%) Query: 30 ERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQ 89 E G + + + + TV+ +G R + + SD ++ SG+ + + Sbjct: 75 EPLEGAISSRPLGSIAIGTVSFNGQRYIRDHRTIVHSDLDYYLIQLFTSGKMNGDFNGLG 134 Query: 90 VQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQ 149 V+ GDI LD S+ S+ ISL + R LE+ + + L D PM + Sbjct: 135 VRADVGDICFLDLSKAFKSEVDAGSR-ISLAVSRRDLEKVI-GPRSLHGVVLRGDQPMTR 192 Query: 150 LSHRLLQESMN-NPALSETESEAALQAMVCLLRPVLH--QRESVQPRRERQF---QKVVT 203 L L+ + +LS E+ A+ +A++ LL + ES++ Q+V+ Sbjct: 193 LIATYLKGIRSLERSLSPVEALASEEALIALLAGAVKGDALESLEDYPSMSIALRQRVLA 252 Query: 204 LIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAI-RHAAD 262 ID NI E+ L PE I + +S LYR FA+ G VA+ IR+RRLD + + + Sbjct: 253 FIDQNIGEQELSPELIQQKLRVSRSHLYRAFAEDG-GVAKIIRDRRLDEAFKQLTKPSKQ 311 Query: 263 DEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGE 295 + I + GFS + F+ RF MTP E Sbjct: 312 SRSVRQIAYSLGFSSGNQLLRGFRARFDMTPKE 344 >UniRef50_C0RK84 Helix-turn-helix-domain containing protein AraC type n=35 Tax=Brucella RepID=C0RK84_BRUMB Length = 332 Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 73/267 (27%), Positives = 128/267 (47%), Gaps = 22/267 (8%) Query: 40 FAKGL-KLSTVTTSGVNLSRTWQEV-KGSDDAWFYTVFQLSGQAIM-EQDERQVQIGAGD 96 +A GL + T T + + +RT + + +G D FY + L+G ++ + D V GD Sbjct: 39 YASGLITIGTTTFNTQSYARTPKIIAQGGLD--FYVLQLLTGGHLLGDFDGTDVAAKPGD 96 Query: 97 ITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQ 156 I ++D ++ + + ++ +PR LE+ + + L P+ +L +Q Sbjct: 97 IVIIDMAKTL-VSRAFKGPRTTVFIPRAELEEVVGGRN-LHGLVLSGTRPITRLLFSYIQ 154 Query: 157 ESMNN--PALSETESEAALQAMVCLLRPVLHQRE----SVQPRRERQFQKVVTLIDDNIR 210 E +N P LS E+ AA + M+ LR + E P +++++ ID N+ Sbjct: 155 E-LNAVVPDLSMDEAIAAQKVMLTFLRTGITGLEENLVGFLPVNLPMKKRILSFIDQNLS 213 Query: 211 EEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAADDEKLA--- 267 + +L P I +S LYR F + G VA+ IR++RLD A R A++ Sbjct: 214 DPLLGPRTIIQNFHVSRSHLYRAFENDG-GVAKTIRDKRLD---RAFRILAEERNRTVYS 269 Query: 268 -GIGFHWGFSDQSHFSTVFKQRFGMTP 293 + + GF+D + F++ FK RFGM+P Sbjct: 270 KEVAYRCGFNDPAQFASAFKNRFGMSP 296 >UniRef50_Q5FS53 Transcriptional regulator n=1 Tax=Gluconobacter oxydans RepID=Q5FS53_GLUOX Length = 292 Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 41/112 (36%), Positives = 64/112 (57%), Gaps = 1/112 (0%) Query: 189 SVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNR 248 SV RR + + + I+ + E L P+ IA +G+S R+LY++F + VA +I NR Sbjct: 164 SVAGRRRHRQKHIRHYIETRLHEHDLTPQSIAEASGISTRALYQLFDGEEGAVAGWILNR 223 Query: 249 RLD-FCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRK 299 RL+ AD A D +A I + GF + +HFS F+Q+FG +P E R++ Sbjct: 224 RLERIHADLTNPAHDALPIAQIALNHGFRNAAHFSRRFRQKFGASPREIRQR 275 >UniRef50_B5GUE4 AraC family regulatory protein n=1 Tax=Streptomyces clavuligerus ATCC 27064 RepID=B5GUE4_STRCL Length = 327 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 71/271 (26%), Positives = 118/271 (43%), Gaps = 19/271 (7%) Query: 43 GLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDA 102 ++L+T++ + RT ++ SD + L + + Q + ++ AGD+ L Sbjct: 52 AVQLTTMSFPAIRSERTPALIRYSDPEDYQLTLILGTEMWISQARNEARMAAGDLVLWST 111 Query: 103 SRP-----CSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLL-- 155 S P + SK I L LPRT L + A + + + R L Sbjct: 112 SLPFDGRGLAGSHNGISKAIILHLPRTGLPLPTAKVDHLLANAVPGRTGIAGILARHLLG 171 Query: 156 ----QESMNNPALSETESEAALQAMVCLLRPVLHQRESVQP--RRERQFQKVVTLIDDNI 209 + PA ++ A + L R+ V P R + ++ ID N+ Sbjct: 172 VAEEASHLEGPAAAQV-GIATWELATAFLGHWADARDRVPPESRDRMRLARIDAFIDANL 230 Query: 210 REEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCA---DAIRHAADDEKL 266 + L P IA +SVR+L+ +F D+ V+ IR RRL C A R+AA + + Sbjct: 231 SDPHLTPAGIAAYHHLSVRTLHWLFRDREQTVSATIRRRRLRRCCAELTAARYAA--QPI 288 Query: 267 AGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 I WGF++ + FS +F+ +G+TPGE+R Sbjct: 289 HTIAARWGFTNAAAFSRIFRTEYGITPGEFR 319 >UniRef50_D0IZV7 Transcriptional regulator, AraC family n=1 Tax=Comamonas testosteroni CNB-2 RepID=D0IZV7_COMTE Length = 338 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 62/257 (24%), Positives = 106/257 (41%), Gaps = 4/257 (1%) Query: 44 LKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDAS 103 L L+ V ++ RT ++ + +G A + Q+ ++V++G + L D+ Sbjct: 52 LALNEVRGPAHDMWRTAADLSCGGSPVLFVNLYRTGNARIVQNGQEVEVGPQRLLLFDSC 111 Query: 104 RPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPA 163 RP L ++ +SL +P LL RL P + L +++ S Sbjct: 112 RPFKLQHSVATDLLSLAVPHALLGDRIVQALEEMPWRLPGTAPALLLMNQMQALSKWQAD 171 Query: 164 LSETESEAALQAMVCLLRPVLH---QRESVQPRRERQFQKVVTLIDDNIREEILRPEWIA 220 + + Q+MV LLR ++ + + P R KV LI + + P A Sbjct: 172 IQAPDGACIAQSMVSLLRALMPEGLEPRAAPPHRRHARAKVAALIGRHYADPDYSPLRAA 231 Query: 221 GETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSH 280 E G+SVRSL+ A G + RL+ ++ A + GF+ +H Sbjct: 232 AEIGVSVRSLHAWLAGDGTSFGAELWGYRLERVRTLLK-AEPQLSIQEAASRCGFASCAH 290 Query: 281 FSTVFKQRFGMTPGEYR 297 S F++RFGM P +R Sbjct: 291 LSRRFRERFGMAPKAWR 307 >UniRef50_Q5YUM1 Putative transcriptional regulator n=1 Tax=Nocardia farcinica RepID=Q5YUM1_NOCFA Length = 309 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 66/257 (25%), Positives = 115/257 (44%), Gaps = 8/257 (3%) Query: 46 LSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRP 105 L+TV + +++R+ V+ + Q G+ +EQD R +G GD+ + D +RP Sbjct: 48 LTTVDAAPQDVARSPGLVRRNPTDSVMIGLQTRGRGFVEQDGRVAAVGPGDLVVYDPARP 107 Query: 106 CSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQE-SMNNPAL 164 +L + LLLPRT L + + A L + + + + L Sbjct: 108 YTLRFPTPFVTRVLLLPRTHLREVEQAIGDLTARALPGAGGIGAVFGAFVTSVAEQRDTL 167 Query: 165 SETESEA----ALQAMVCLLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIA 220 +E ++ A LLR V P +E ++ T ++++ + L +A Sbjct: 168 TEDTHQSLCWQAAALGTALLRTVAGTSTPHSPAQEDLLRRARTYAEEHLADPALNAAALA 227 Query: 221 GETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAADDEKLAG-IGFHWGFSDQS 279 +S R L+++FA++ ++I+ RRLD I AA+ L + GF+D + Sbjct: 228 RALHVSPRYLFKLFAERETTPGRWIQARRLDRARAEI--AANPAVLVSVVAARCGFADPT 285 Query: 280 HFSTVFKQRFGMTPGEY 296 HFS FK RFG+TP + Sbjct: 286 HFSRAFKSRFGLTPSAF 302 >UniRef50_C9PGF5 Transcriptional regulator AraC family n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PGF5_VIBFU Length = 258 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 55/241 (22%), Positives = 105/241 (43%), Gaps = 8/241 (3%) Query: 62 EVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLL 121 +V+ SDD ++ L A + Q + AGDI + D +P + + QI + + Sbjct: 17 DVEYSDD--YFICLSLCPLACLTQAGVTSEQHAGDIVMYDNHQPFRYTFPQGDNQIVISV 74 Query: 122 PRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLR 181 P L+ ++ + L D P+V +L+++ E + L+A++ +L Sbjct: 75 PHALVREHIKDCEAWLNVTLKRDAPLVSFVAAMLEQAWLTEEQEEVFGDQMLRAILMMLG 134 Query: 182 PVLHQRES-----VQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFAD 236 VQ + I+ + + L I+ MS R+L R+FA Sbjct: 135 TAFQAASGEASALVQRDKRNNLALAQHYIEQQLGDPALSVVSISSHLHMSARTLSRLFAK 194 Query: 237 KGLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEY 296 + V +++ +RL C + + ++ I + GFS+ HF+ +FK+++GMTP + Sbjct: 195 QNTSVMRWVWLQRLKACRRMLL-THQEMAISDIAYQQGFSNLPHFNKLFKEKYGMTPSQM 253 Query: 297 R 297 R Sbjct: 254 R 254 >UniRef50_A5EQH2 Transcriptional regulator, AraC family n=3 Tax=Bradyrhizobium RepID=A5EQH2_BRASB Length = 777 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 61/267 (22%), Positives = 116/267 (43%), Gaps = 12/267 (4%) Query: 41 AKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLL 100 A GL LS ++ S++ V + + + + A++ + + +G + LL Sbjct: 49 APGLALSRLSAG----SQSVAAVPQAHEDLPIALLAIEDGAVLRSGDSHRIVPSGHLLLL 104 Query: 101 DASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMN 160 +R S+ +Q + I L + L + ++ A + + + R ++ + Sbjct: 105 PRTRDWSIAFQRDLRAIVLSVTSDALHGRISGKLKFAKPQVIAPIGLADVVCRTIEATAR 164 Query: 161 N-PALSETESEAALQAMVCLLRPVLHQRESVQPRRERQFQKVVTL------IDDNIREEI 213 LS+ E Q++V LL + H++ + TL I+ + + Sbjct: 165 TLETLSDAEWSTVAQSLVDLLLTLAHRQAVPVSEAGSSATQAATLHRICQSIERRLDDAT 224 Query: 214 LRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFC-ADAIRHAADDEKLAGIGFH 272 L P +A G+S R L ++F G + Y+R RRL D A ++ I + Sbjct: 225 LTPASVAQAEGISERYLQKLFESAGDNFSHYVRERRLQRAWTDLSNPAEAHHSISEIAYR 284 Query: 273 WGFSDQSHFSTVFKQRFGMTPGEYRRK 299 WGF+D +HFS F+ RFG++P E+R++ Sbjct: 285 WGFADSAHFSRSFRARFGLSPREFRQQ 311 >UniRef50_C8STG1 Transcriptional regulator, AraC family n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8STG1_9RHIZ Length = 315 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 81/306 (26%), Positives = 128/306 (41%), Gaps = 39/306 (12%) Query: 24 TGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRT-WQEVKGS-----DDAWFYTVF-- 75 T RLL G + F +G S VNL E+K + +D F+ F Sbjct: 17 TSRLLF----GPITQRFPRGTVPSIPQLVSVNLGACRLSEIKANSHLVVNDRLFWRSFDP 72 Query: 76 -------QLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQ 128 QL G++ EQ + V +G + D R SL Q+ L +PR+ Sbjct: 73 DAIKILVQLRGRSRFEQQQVAVDLGPQSAVIYDPVRSYSLQNLSDVDQLILQVPRSTFGD 132 Query: 129 YFPHQKPICAERLDADLPMV----QLSH---RLLQESMNNP-ALSETESEAALQAMVCLL 180 RL A LP+ L+H L+Q ++ L E S ++V L+ Sbjct: 133 D-------TLARLSAPLPLPGNGDSLTHIVSGLMQMAIGEAHKLDEAGSRRVGDSLVQLV 185 Query: 181 RPVLHQR----ESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFAD 236 ++ + E +P E +++V ID N+ L E IA G S R L+R F Sbjct: 186 NGLIQAKPMAPEFRRPPLEALRERIVAYIDANLARSSLSAEDIARHMGCSRRYLHRAFEG 245 Query: 237 KGLVVAQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGE 295 +G + +++ +RRL+ + + A ++ I F GF+ +HFS FK R+ + P E Sbjct: 246 EGATLERFVWDRRLERSKEELLSPARASASISEIAFACGFNSSAHFSRAFKGRYDVAPRE 305 Query: 296 YRRKFR 301 R + R Sbjct: 306 LRERLR 311 >UniRef50_Q89RN6 Transcriptional regulatory protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89RN6_BRAJA Length = 336 Score = 71.2 bits (173), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 73/257 (28%), Positives = 108/257 (42%), Gaps = 10/257 (3%) Query: 43 GLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDA 102 GL ++ + V +R+ K F + G E D + G G + +LD Sbjct: 54 GLVAASTRMAPVRFTRSAALAKADGRNSFALLLLRRGAWSGEVDGEPISAGPGQVLVLDL 113 Query: 103 SRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSH-RLLQESMNN 161 +RP ++ ISL + R + P + LD V H LL+ + Sbjct: 114 TRPFD-GIATATDTISLDVERDPIVSAAPDGLDLHGLVLDGAAGRVLADHMALLRRRL-- 170 Query: 162 PALSETESEAALQAMVCLLRPVL----HQRESVQPRRERQ-FQKVVTLIDDNIREEILRP 216 PA+ E ++ A++ + LLR RE RR+ + ID N+ L Sbjct: 171 PAMEENDALDAVRTTLDLLRGCFGVAARPREQGLARRDIAILHRASRFIDQNLGRNDLSV 230 Query: 217 EWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFS 276 I E G+S LYR+FA VA YIR RRL+ + A +D A I +GF Sbjct: 231 ATICREIGVSRSVLYRVFAPLA-GVADYIRGRRLEAIHVLLDDADEDRWNAEIAAAFGFV 289 Query: 277 DQSHFSTVFKQRFGMTP 293 Q+HFS F+Q FG +P Sbjct: 290 SQAHFSRSFRQHFGYSP 306 >UniRef50_B2UHP4 Transcriptional regulator, AraC family n=2 Tax=Ralstonia pickettii RepID=B2UHP4_RALPJ Length = 338 Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 69/298 (23%), Positives = 133/298 (44%), Gaps = 9/298 (3%) Query: 6 DNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKG 65 +++F W IN + + + + + +D + + ++ + R+ ++ G Sbjct: 17 EHQFAAWRDAINVLFDSRSAAPQSHGFQASVDAYLCGETGVGMLSAQAQHYDRSRSKL-G 75 Query: 66 SDDAWFYTV-FQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRT 124 D Y + + L G GD+ ++DA++P + +S + +SL +PR Sbjct: 76 RDGMDVYVLQYYLEGSCGQRDGASDSATRPGDLFIVDAAQPLATSTTDS-RFLSLAVPRR 134 Query: 125 LLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPA-LSETESEAALQAMVCLLRPV 183 LL + L PMV L L ++ LS+ E++A + + L Sbjct: 135 LLAPLLRAPDELSMRVLRGGAPMVGLLRDHLCSLYHSVGKLSDAEAQAVIPGTLQLAAAA 194 Query: 184 LHQR--ESVQPR-RERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLV 240 ++ + E+ P RE F V + N+ + L PE ++ + G+S +LYR+F +G Sbjct: 195 INCQVTEANAPAVRESLFASVCRHVQHNLSDLALSPEGVSVQFGISRATLYRLFEREGGF 254 Query: 241 VAQYIRNRRLDFCADAIRHAADDEK-LAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 Y+R +RL C + + + +A I +GFSD S+F+ +++ GM+P E R Sbjct: 255 F-NYLRMQRLRQCHAILADRSQTHRSVAEIAQTYGFSDASNFARAYRRATGMSPRETR 311 >UniRef50_A5UV19 Transcriptional regulator, AraC family n=1 Tax=Roseiflexus sp. RS-1 RepID=A5UV19_ROSS1 Length = 339 Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 44/131 (33%), Positives = 63/131 (48%), Gaps = 1/131 (0%) Query: 170 EAALQAMVCLLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRS 229 + A A+V LR R + R + I+ + ++ L P IA G+SVR Sbjct: 200 DCAFDAIVVWLRSEQTVRVGLSAHRRELLNAIYAYIERYLDDDQLCPRTIASSFGISVRY 259 Query: 230 LYRMFADKGLVVAQYIRNRRLDFC-ADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQR 288 L+ +F G VAQ+I RRL+ ++ + D L + WGF D SHFS VF+Q Sbjct: 260 LHSLFTATGTTVAQWIMIRRLEAIRSELLLRGGDRGCLRDVATRWGFHDLSHFSRVFRQH 319 Query: 289 FGMTPGEYRRK 299 FG P Y R+ Sbjct: 320 FGTPPLTYIRQ 330 >UniRef50_B5GVU7 AraC family regulatory protein n=1 Tax=Streptomyces clavuligerus ATCC 27064 RepID=B5GVU7_STRCL Length = 185 Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 36/102 (35%), Positives = 58/102 (56%), Gaps = 2/102 (1%) Query: 198 FQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAI 257 ++ ID ++R+ +L P IA +SVR LY +F +GL V IR+RRL+ C D + Sbjct: 60 LDRIDAFIDQHLRDPLLTPRRIAVHHHISVRWLYSLFDGRGLSVTASIRHRRLERCRDDL 119 Query: 258 RHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRK 299 H + L + W FS S FS F++++G++P YR++ Sbjct: 120 VHTSLPIHL--VAARWCFSSPSTFSKAFREKYGVSPRAYRQR 159 >UniRef50_A6UK34 Helix-turn-helix-domain containing protein AraC type n=1 Tax=Sinorhizobium medicae WSM419 RepID=A6UK34_SINMW Length = 348 Score = 70.5 bits (171), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 57/181 (31%), Positives = 82/181 (45%), Gaps = 13/181 (7%) Query: 129 YFPHQKPICAERLDA--DLPMVQLSHRLLQESM-----NNPALSETESEAALQA-----M 176 YFP + + A LD D + S RLL + + + P ++ E ++A + Sbjct: 137 YFPSEGFVPASILDCLLDRSVQGASGRLLTDYLMLLVRSLPDMTVAEVPYVVEATRNLVV 196 Query: 177 VCLLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFAD 236 CL ++ +P ++ +I + + L PE I E G+S LYR+F Sbjct: 197 ACLAPSPDRVADAQRPIAAVVLERAKRMITSRLVDRSLTPEAICCEIGISRSRLYRLFEP 256 Query: 237 KGLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEY 296 G V A YIR++RL AI D ++ I WGF D S FS FK FGMTP E Sbjct: 257 LGGVAA-YIRHQRLVRTRSAISSIEDVRPISRIAEEWGFDDPSAFSRAFKHEFGMTPKEV 315 Query: 297 R 297 R Sbjct: 316 R 316 >UniRef50_A9BNP3 Transcriptional regulator, AraC family n=3 Tax=Comamonadaceae RepID=A9BNP3_DELAS Length = 314 Score = 70.5 bits (171), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 67/233 (28%), Positives = 106/233 (45%), Gaps = 12/233 (5%) Query: 67 DDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLL-LPRTL 125 D+ W + Q GQA + Q + ++ AG++ L DAS+P + + + I L+ +PR+ Sbjct: 82 DELWLGYLLQ--GQAEVRQGGQVARLSAGNLVLYDASQP--FEFSVAPRDILLMRIPRSE 137 Query: 126 LEQYFPHQKPICAER-LDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPVL 184 L F + P+ A R L P V +L E++ P ++ A M L L Sbjct: 138 LLNRFA-RAPLHAGRVLHGHAPAVAPLRAMLGEAIAMPPAPHGDALAQRFGMALLDVLAL 196 Query: 185 H---QRESVQPRRERQFQ-KVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLV 240 Q +VQPR ER ++ I DN+ L +W+A + +S R++ R FA + Sbjct: 197 ALEMQEMAVQPRAERDLHGRIQAFIQDNLGSPELSLQWLAQQHNVSPRTVTRAFARRNQT 256 Query: 241 VAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTP 293 + RL A+ + F GFSD +HFS F++ FG TP Sbjct: 257 PMGLVWQLRLQASRQALMQG-RCSSVTEAAFAHGFSDAAHFSRAFRKAFGCTP 308 >UniRef50_D0XVC6 Transcriptional regulator, AraC family n=1 Tax=Caulobacter segnis ATCC 21756 RepID=D0XVC6_9CAUL Length = 347 Score = 70.5 bits (171), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 73/235 (31%), Positives = 108/235 (45%), Gaps = 24/235 (10%) Query: 80 QAIMEQDER------QVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQ 133 Q I E +R +V+ GD+ LLD SR Q + SL +PR L Sbjct: 90 QIIAEGSDRRQAHRSEVETQVGDVCLLDLSRSFQSEAQ-TCGNFSLAIPREALAARDRDL 148 Query: 134 KPICAERLDADLPMVQL--SHRLLQESMNNPALSETESEAALQAMVCLLR----PVLHQR 187 + L D P +L H SM ALS ++ A ++ + LL P ++ Sbjct: 149 DDLHGRVLRYDTPAARLLKGHVETIWSMTG-ALSIHDAPAVGRSTIDLLAGLALPTSDRQ 207 Query: 188 ESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRN 247 ++ + E + ++ ID N+ E L PE ++ + G+S SLYR+F G V ++I+ Sbjct: 208 QARRAVSESRLTQIRRFIDANLHEPGLGPEMLSRQFGLSRASLYRLFEPLG-GVREHIQG 266 Query: 248 RRLDFCADA-----IRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 RRL DA +RH L+ + GFS S F+ FK RFGM+PGE R Sbjct: 267 RRLRRVFDALTDPSLRHL----PLSQVAEGHGFSAWSSFARAFKARFGMSPGEAR 317 >UniRef50_C5CWJ0 Transcriptional regulator, AraC family n=1 Tax=Variovorax paradoxus S110 RepID=C5CWJ0_VARPS Length = 305 Score = 70.1 bits (170), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 62/225 (27%), Positives = 103/225 (45%), Gaps = 15/225 (6%) Query: 78 SGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPIC 137 SG +EQ+ GDI L DA+RP Y ++ +PR LL + P + Sbjct: 80 SGVGYVEQNGNSTVQNTGDIVLYDAARPWK-YRLNMQTFYTVRIPRDLLTRRSPAAERFV 138 Query: 138 AERLDADLPMVQLSHRLLQESMNNPALSETE------SEAALQAMVCLLRPVLHQRES-V 190 A L A + L++E N AL+ + + L+ + C++ LH Sbjct: 139 ATSLGAGTGFRPVLGSLIKELRENSALASAPAAATHVTTSLLELLACVID--LHAGNGPS 196 Query: 191 QPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRL 250 Q + +++ + +I + L +A +S+R+L R+FA G +YI +RL Sbjct: 197 QSVTDALYKRACAYVMQHIEDPELSIASVAKSERISLRTLARVFAANGTTPMRYIWQKRL 256 Query: 251 D--FCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTP 293 + +CA A K++ ++GFSD SHFS FK+ FG++P Sbjct: 257 EASYCAMA---QGSVRKVSEAAMNYGFSDLSHFSRAFKKAFGVSP 298 >UniRef50_Q54308 Helix-turn-helix DNA binding protein n=2 Tax=Streptomyces RepID=Q54308_STRHY Length = 330 Score = 70.1 bits (170), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 47/148 (31%), Positives = 75/148 (50%), Gaps = 4/148 (2%) Query: 154 LLQESMNNPALSETESEAALQAMVCLLRPVLHQR-ESVQPRRERQFQKVVT-LIDDNIRE 211 ++ E+M L +AA ++ L + V +R + V+PR L D ++ + Sbjct: 179 MVYETMTG--LGPAGVQAAHSTLLELAQSVARRRFDDVEPRLAPALAGAAKDLADSHLTD 236 Query: 212 EILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGF 271 L P +A E +S+R+L R F G + YIR+RRL+ A+ +A ++ + Sbjct: 237 PELSPTMLARELNVSLRTLQRAFTVAGESLIAYIRHRRLEEARRALIASAGRLSVSELAA 296 Query: 272 HWGFSDQSHFSTVFKQRFGMTPGEYRRK 299 HW F+D SHF VFK+ +G TP EY R Sbjct: 297 HWQFADSSHFIRVFKKTYGQTPTEYARS 324 >UniRef50_A1TIH4 Transcriptional regulator, AraC family n=2 Tax=Acidovorax RepID=A1TIH4_ACIAC Length = 312 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 67/280 (23%), Positives = 119/280 (42%), Gaps = 24/280 (8%) Query: 32 YTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVK-GSDDAWFYTVFQLSGQAIMEQD-ERQ 89 ++ L + GL+++ V+ SG + RT Q ++ G D ++Y + + S + QD Sbjct: 43 FSATLTSVPCGGLRVNRVSGSGQRVRRTQQAIRRGDGDNFYYLLCKDSAPCHVAQDGAGA 102 Query: 90 VQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLP--- 146 ++ GD+ L+D+ R L + + +S+ +P L+ + P R+D Sbjct: 103 ARLLPGDLALVDSRRRYLLDFPDVVDTVSIQIPIGWLDTWLPAADRWLGRRVDGATGWGR 162 Query: 147 -MVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPVLHQRESVQPRRERQFQKVVTLI 205 + +L E A + E L ++ C P R + PR I Sbjct: 163 VLSAYVGQLCAERPERLAALQAEHLGGLLSLACGPVPEAPPRTGLLPR-----------I 211 Query: 206 DDNIREEILRP----EWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAA 261 + +RE P +A + G+S+R+L+R+ + G A + R+ A + HA Sbjct: 212 EQCVRERFCEPGLTAAHVADDVGVSLRTLHRVLSSGGTTFAVLLMRERMAV-AQRMLHAP 270 Query: 262 DDEKL--AGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRK 299 + A IG GF D SHF+ +Q G TP + R + Sbjct: 271 SHRHVTVAEIGRRAGFLDPSHFARACRQWCGRTPAQERAR 310 >UniRef50_Q2G766 Transcriptional regulator, AraC family n=1 Tax=Novosphingobium aromaticivorans DSM 12444 RepID=Q2G766_NOVAD Length = 312 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 71/287 (24%), Positives = 120/287 (41%), Gaps = 19/287 (6%) Query: 16 INQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVF 75 +N +F+GR+L+ R G LD + + T SGV + Q DD Sbjct: 34 VNVPGEDFSGRMLSWR-VGELD------MIRTDSTHSGVGRTPIAQ-----DDERLILHL 81 Query: 76 QLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKP 135 Q G + Q + + + GD L P S+ + + + PR L + FP Sbjct: 82 QCRGTSQHMQKQAECALEPGDFVLASPHIPYSIKLT-GHEMLVVEFPRAPLAERFPGVDD 140 Query: 136 ICAERLDADLPMVQLSHRLLQE--SMNNPALSETESEAALQAMVCLLRPVL---HQRESV 190 +R+ P ++ H L A + E E + A+ L + QR + Sbjct: 141 ALLQRMCGASPGGRVFHDFLLSLWQQGERAAEDPEWEVGVNAVFYDLAAMAMRGAQRPNA 200 Query: 191 QPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRL 250 + +KV+ ++ ++ + LR IA +SVR++ +FA G YI +RL Sbjct: 201 EVGEADLRRKVLAMVSSSLEDPALRTASIADACNISVRTVQNVFAAMGTTPTAYILEQRL 260 Query: 251 DFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 AD + D + I F GF+D ++F+ F+Q+FG P ++R Sbjct: 261 RRAADRLV-GRPDASITEIAFELGFNDSAYFTRCFRQQFGAAPRDWR 306 >UniRef50_C7HYF2 Transcriptional regulator, AraC family n=1 Tax=Thiomonas intermedia K12 RepID=C7HYF2_THIIN Length = 312 Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 60/261 (22%), Positives = 127/261 (48%), Gaps = 14/261 (5%) Query: 44 LKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDAS 103 L+ +T S +LS +V+ D + V + G+ ++EQ ++ AGD++ + Sbjct: 56 LQPQIITHSAQHLSALSADVR--DTVLSHIVIE--GEGVIEQKGATLRFRAGDLSFRNLQ 111 Query: 104 RPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRL--LQESMNN 161 +P + ++ ++ I++ +PR L HQ ++R P V S+ L L + Sbjct: 112 QPSRIVFETPARLIAVRMPRGAL---LWHQA--RSDRRQLLRPRVVASYGLNTLLPVSDQ 166 Query: 162 PALSETESEAALQAM-VCLLRPVLHQRESVQPRRERQFQKVVTLIDDNIRE-EILRPEWI 219 ++S + AL + + E +P ++Q+V++ ++ ++ + L P Sbjct: 167 GSVSSLYAGFALPWLFAAAYYSIERDAEPAKPPNATRWQQVLSYVETHLFDASALSPADC 226 Query: 220 AGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAADDE-KLAGIGFHWGFSDQ 278 A G+S R LYR+ + +G+ ++ +++RRL+ + H A +A + + GF++ Sbjct: 227 ARAVGISERYLYRLASLRGITFSRLVKHRRLETARALLEHPASRHVSIASVAYQCGFTEP 286 Query: 279 SHFSTVFKQRFGMTPGEYRRK 299 +HFS ++Q FG +P + R+ Sbjct: 287 AHFSRAYRQHFGQSPRQSRKS 307 >UniRef50_C5D1Y8 Transcriptional regulator, AraC family n=1 Tax=Variovorax paradoxus S110 RepID=C5D1Y8_VARPS Length = 344 Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 60/223 (26%), Positives = 98/223 (43%), Gaps = 11/223 (4%) Query: 77 LSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPI 136 +SG+ E D + GDI D SR + + + +S+++PR LL + Sbjct: 90 VSGKCEFEADGHAGRGKTGDIVCFDMSRQMN-SRTSTLEMVSVVIPRELLRLAPRTLDTL 148 Query: 137 CAERLDADLPM-VQLSHRLLQESMNNPALSETESEAALQAMVCLLRPVLHQRESVQPRRE 195 LD + L L+ + P ++ +ES+ A +A L+ L P Sbjct: 149 HGAVLDGETTFGTLLREHLMSMARVAPRINASESKLAAEATATLISASL---SGCGPAGS 205 Query: 196 ----RQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLD 251 Q + + I+ N+ L PE + G+S +LYR F G +A+YIR RRLD Sbjct: 206 DLVGGSLQAIQSYIERNLNNPALSPEMLMRHFGLSRSALYRTFEALG-GIAEYIRGRRLD 264 Query: 252 FCADAIRHAADDE-KLAGIGFHWGFSDQSHFSTVFKQRFGMTP 293 + ++ + F GFS+++ FS F+QRFG+ P Sbjct: 265 RAFLRLTSVGTGRGSVSKLAFACGFSNETAFSRAFRQRFGVPP 307 >UniRef50_Q38ZZ8 Transcriptional regulator, AraC family n=1 Tax=Burkholderia sp. 383 RepID=Q38ZZ8_BURS3 Length = 344 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 66/229 (28%), Positives = 104/229 (45%), Gaps = 18/229 (7%) Query: 78 SGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQE--SSKQISLLLPRTLLEQYFPHQKP 135 +G E D R V + GDI ++D +RP Y +E + I+LL+ R +L P Sbjct: 99 AGSVHGEIDGRPVFVQPGDILVVDQARP---YHREIQAGDAITLLVARDMLPNL-----P 150 Query: 136 ICAERLDADLPMVQLSHRLLQESMNN-PALSETESEAALQAMVCLLRPVLH--QRESVQP 192 + + QL L+ ++ LS++E+ QA + L++ +L +E Sbjct: 151 SSVHGTLFNGGISQLLDSFLRSLLDKIGTLSQSEALHVEQATLSLVKAMLSPTAQEISNA 210 Query: 193 RRE---RQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRR 249 R E + K+ I N+ L P+ I E G+S SLYR+F G VA YIR RR Sbjct: 211 RSELLSTLYVKIKAYIRQNLESPDLSPDRICKEIGISRSSLYRLFEQDG-GVANYIRKRR 269 Query: 250 LDFCADAIRHA-ADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 L A+ + ++ + + +GF+ + S FK FG P E R Sbjct: 270 LLAIHRALMSPESPRHRIGDLAYRYGFNSNTQLSRAFKLEFGHAPSETR 318 >UniRef50_B1M4R6 Transcriptional regulator, AraC family n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1M4R6_METRJ Length = 313 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 76/273 (27%), Positives = 119/273 (43%), Gaps = 25/273 (9%) Query: 37 DTHFAKGLKLSTVTTSG---------VNLSRTWQEVK--GSDDAWFYTVFQLSGQAIMEQ 85 D FA G +L+ +T G + + RT V+ G DD V L G +EQ Sbjct: 42 DVPFAAGRRLA-ITRHGAVLHTLSNPIGVERTALHVRRDGRDD--IAIVLLLQGSGYVEQ 98 Query: 86 DERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADL 145 + AGD+T+ +P ++ ++S ++I L +PR + RL A Sbjct: 99 GNGGALLSAGDVTVHAMDQPFAIGSRDSYEEIRLQVPRAAFLSQVGSVQAFAGRRLRAT- 157 Query: 146 PMVQLSHRLLQE-SMNNPALSETESEAALQAMVCLLRPVLH-QRESVQPRRERQFQKVVT 203 P+ L L+ S LSE E+ AL+ ++ LLR + Q E + + Sbjct: 158 PLSGLFATYLRSFSETIGGLSEAEAGIALEGVLHLLRALADGQGEKAGDDLSGDAVRALA 217 Query: 204 L--IDDNIREEILRPEWIAGETGMSVRSLYRMF-ADKGLVVAQYIRNRRLDFCADAIRHA 260 L I+ + + PE + +S LY F D+G VA IR+ RLD A R Sbjct: 218 LAHIERRLHDPAFGPEALPAALRVSRSRLYAAFTGDEG--VAAKIRDARLD---RAYRRL 272 Query: 261 ADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTP 293 ++A + GF+D + FS F++RFG+ P Sbjct: 273 RGGTRIASVMTSCGFTDAATFSRAFRRRFGVAP 305 >UniRef50_D2AT05 AraC family transcriptional regulator n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2AT05_STRRD Length = 342 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 69/274 (25%), Positives = 115/274 (41%), Gaps = 23/274 (8%) Query: 43 GLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDA 102 ++++T+ + RT + ++ SD + L G + Q R+ +G D+ L D Sbjct: 52 AVQVATLHYPSLRPQRTPKLIRQSDPEMYCLSLTLRGTMTLAQAGRETVLGPQDLALYDT 111 Query: 103 SRPCSLYWQES-----SKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQE 157 SRP Y S + ++L +PRTLL + A L + L L + Sbjct: 112 SRP--FYGTTSGNGDRAASMTLHIPRTLLPLPAGTVSRLTAVGLSGRQGIGALLCGHLGK 169 Query: 158 SMNNPALSETESEAALQAMVCLLRPVL--HQRES-----VQPRRERQFQKVVTLIDDNIR 210 + + A A L A+ L + H E+ + R+ ++ I ++ Sbjct: 170 LVRHAAEYTAADAARLSAITVDLFAAMCAHHLEADAALPAETHRQVLQTRIHAFIQQHLG 229 Query: 211 EEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYI-----RNRRLDFCADAIRHAADDEK 265 + L E IA +SVR LY++F D+GL VA +I R D A+R Sbjct: 230 DPTLCAETIAAAHQISVRYLYQLFHDQGLTVAAWIRHRRLERCRRDLTDPALR----SRP 285 Query: 266 LAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRK 299 + I WGF+ HFS F+ +G +P +YR + Sbjct: 286 IHAIATRWGFAGNPHFSRTFRAAYGSSPSDYRHQ 319 >UniRef50_D0XZK5 Transcriptional regulator, AraC family n=1 Tax=Caulobacter segnis ATCC 21756 RepID=D0XZK5_9CAUL Length = 219 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 38/105 (36%), Positives = 59/105 (56%), Gaps = 5/105 (4%) Query: 197 QFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFA-DKGLVVAQYIRNRRLDFCAD 255 Q ++ +L+ DN+R+E+ PE +A + G+SV R F G +++ RRLD + Sbjct: 100 QLKRAKSLLADNLRKEMSLPE-VAEQCGLSVAHFSRAFKISTGEAPHAWLQARRLDLARE 158 Query: 256 AIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKF 300 ++ D+ LA I G++DQSHFS +FK+ G PG YRR Sbjct: 159 LLK---GDQSLAEIAVACGYADQSHFSRLFKRAVGHGPGTYRRHL 200 >UniRef50_Q0FYH5 Transcriptional regulator, AraC family protein n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0FYH5_9RHIZ Length = 344 Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 64/253 (25%), Positives = 115/253 (45%), Gaps = 6/253 (2%) Query: 52 SGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQ 111 SGV+ R+ Q+++ F L G+ ++ + I G+I LLDA+RP + Sbjct: 68 SGVSHERSTQKIRTDGFEHFVLQANLGGELVVTTPDATKIIRPGEIALLDAARPY-VNRC 126 Query: 112 ESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEA 171 +++ +++ + R ++E + L + + L ++ N LS + A Sbjct: 127 DAAHIVTMSVARHVIENAIGDGLDLHGRILGSATAALLLDF-MVSVHRNANKLSLDAAPA 185 Query: 172 ALQAMVCLLRPVLHQRESVQPRRERQFQKVVT---LIDDNIREEILRPEWIAGETGMSVR 228 + A+ LL S + K+V ++ N+ + L PE IA G+S Sbjct: 186 LIDALSSLLSIAASPNSSAASFSDVSPDKLVAAKRIVRANLGDRRLDPEKIAIMAGVSRS 245 Query: 229 SLYRMFADKGLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQR 288 LY++F G V A Y++ +R+ + + +A + + GF+ +SH S +FK Sbjct: 246 KLYQLFKPSGGVDA-YLQAQRVRRLKHLLSRPRETRGIAELVYLCGFASESHASRMFKTM 304 Query: 289 FGMTPGEYRRKFR 301 FGM PGEYR+ R Sbjct: 305 FGMPPGEYRKTQR 317 >UniRef50_C5SNU8 Transcriptional regulator, AraC family n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SNU8_9CAUL Length = 317 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 37/108 (34%), Positives = 60/108 (55%), Gaps = 13/108 (12%) Query: 196 RQFQKVVTLIDDNIREEILRPEW----IAGETGMSVRSLYRMFADKGLVVAQYIRNRRLD 251 R QK+ TL+ D PE +A E G+S R + ++F + + Y++ RRL+ Sbjct: 212 RICQKIETLLHD--------PELSLLKVAAENGVSPRYVQKLFTGAQMTFSNYLKTRRLE 263 Query: 252 FC-ADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRR 298 C AD I ++ I F WGF+D +HFS F++RFG++P ++R+ Sbjct: 264 RCYADLISPVHAQLSVSEICFRWGFNDAAHFSRTFRERFGLSPSKHRQ 311 >UniRef50_C7I4F1 Transcriptional regulator, AraC family n=1 Tax=Thiomonas intermedia K12 RepID=C7I4F1_THIIN Length = 313 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 57/228 (25%), Positives = 110/228 (48%), Gaps = 14/228 (6%) Query: 77 LSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQY---FPHQ 133 + G +EQ+ ++ GAGDI+ + + P + ++ +L LP T + + Sbjct: 82 VEGDGFIEQNGTRLSFGAGDISFRNLAEPSRVVFKTPGSFYALRLPATAIRLHRADHARY 141 Query: 134 KPICAERL--DADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPVLHQRESVQ 191 +P+ A R+ A LP + L +M+ T A+ LL H + Sbjct: 142 RPL-APRIARGAALPAETVRRALSGMAMDGS--CGTADFYMSFALPWLLAAAYHGDSAPA 198 Query: 192 PR----RERQFQKVVTLIDDNIRE-EILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIR 246 P E ++Q+ + ++ ++ + +IL A G+S R L+R+FA +GL ++ + Sbjct: 199 PAIRAGNELRWQQALDYVEQHLYDADILSAVACAQAIGVSERYLHRLFAQRGLRFSRIVL 258 Query: 247 NRRLDFCADAIR-HAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTP 293 +RL+ ++ A ++ +A I + GF D +HFS +FK+R+G++P Sbjct: 259 AKRLEAAQAMLQCEAYREQAIASIAYQCGFKDPAHFSRLFKERYGVSP 306 >UniRef50_C1AVG9 Putative AraC family transcriptional regulator n=1 Tax=Rhodococcus opacus B4 RepID=C1AVG9_RHOOB Length = 326 Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 66/296 (22%), Positives = 129/296 (43%), Gaps = 22/296 (7%) Query: 11 QWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAW 70 QW S+ G F RL T ++ L LSTV ++ RT + +D Sbjct: 46 QWESR----SGRFEARLSTRQF---------GDLSLSTVRAHAHSVLRTPAMIGDTDSED 92 Query: 71 FYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYF 130 ++ G +EQ +R + + G ++DA +P + + +QI + +PR LL Sbjct: 93 YFLCAVTGGPGRIEQHDRSIWLDKGSFAVIDAGQPFRFDFPQRFEQIVVRVPRPLLLGRM 152 Query: 131 PHQKP--ICAERLDADLPMVQLSHRLLQE--SMNNPALSETESEAALQAMVCLLRPVLHQ 186 + + A+ + A + R LQ+ +++ + + A+ ++ + Sbjct: 153 SERDVDRVMAQPVSAASGAGVVVSRFLQQLAALDAAVPDAPAAALSASALDMIVTALADT 212 Query: 187 RESVQPRRERQ---FQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQ 243 +V P ++ + L+ + +E L A E G+S+R L ++F G ++ Sbjct: 213 GGTVSPTQQAHTADLHRAQNLLKTRLHDENLSITEAAAELGISLRYLQKIFQSTGSTPSE 272 Query: 244 YIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRK 299 ++ + RL+ + + D + + GF D SHFS F+ +G++PG+YRR+ Sbjct: 273 WLLHARLERARMIL--LSTDITIGDLASRVGFKDISHFSRSFRTLYGISPGQYRRR 326 >UniRef50_Q0B5M9 Transcriptional regulator, AraC family n=4 Tax=Burkholderia ambifaria RepID=Q0B5M9_BURCM Length = 316 Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 62/268 (23%), Positives = 114/268 (42%), Gaps = 12/268 (4%) Query: 43 GLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDA 102 GL+++ V T+ + + R +D + +FQ++GQ+ + Q + G+ + DA Sbjct: 47 GLRMAEVDTTAIRVDRDRSLASRADSDCYKILFQIAGQSRVTQRNATSTVNPGEWVIYDA 106 Query: 103 SRPCSLYWQESSKQISLLLP--RTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMN 160 ++P + +S+ ++ L P + ++F + + R + QL+ + + M+ Sbjct: 107 TQPYMIESTNASRFVAALTPPRSGTMWRWFVERAGVQVRRTVGN---AQLALQSIHYLMD 163 Query: 161 NPALSETESEAAL-QAMVCLLRPVLHQRES-----VQPRRERQFQKVVTLIDDNIREEIL 214 ++ ES Q+ + LL V+ + S R + + + L Sbjct: 164 GQVPNDPESLFGFEQSTLMLLDSVIRREASDSLTGTDARSAALRMNAEIYLSHHYSDPDL 223 Query: 215 RPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAADDEK-LAGIGFHW 273 P+ +A +S R+LY A I+ RL A+ AD + L + Sbjct: 224 SPDKLASALNVSRRTLYSALAASERTPQSLIQEYRLQASRRALEDPADTNRTLLELAIAC 283 Query: 274 GFSDQSHFSTVFKQRFGMTPGEYRRKFR 301 GFSD +HF FK RFG +PG YR R Sbjct: 284 GFSDITHFGRAFKARFGCSPGVYRDACR 311 >UniRef50_B1Q2A8 Transcriptional activator for nphA1A2 n=4 Tax=Nocardiaceae RepID=B1Q2A8_9NOCA Length = 335 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 57/263 (21%), Positives = 108/263 (41%), Gaps = 9/263 (3%) Query: 44 LKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDAS 103 L +ST+ + R+ ++ + G + Q R + G LLD + Sbjct: 69 LHVSTIRADAHTVVRSPAMIQSDSGEGYLVCLVTDGSVEVRQSGRATVVEPGSFALLDCA 128 Query: 104 RPCSLYWQESSKQISLLLPRTLLEQYFPHQ--KPICAERLDADLPMVQLSHRLLQE--SM 159 P + +Q+ + PR +L P + + A + D L RL + M Sbjct: 129 APFVFHSPAPFRQVVVRSPREVLTSRLPGRIVEHGTARSIHGDTGAGGLVGRLFVDIADM 188 Query: 160 NNP---ALSETESEAALQAMVCLLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRP 216 + P + + + +A+ + L L + R +V +I+ N+ + + Sbjct: 189 DAPMSQGAAVSFASSAVDMLATALTEGLLATSAADLHRTEDLTRVQRVIEQNLHDADITL 248 Query: 217 EWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFS 276 IA GMS+R+++++F +G ++ RL+ + D +A + GF Sbjct: 249 SDIAAAAGMSLRTVHKLFNAEGTTTRAWLYQARLEAARRYL--LTTDLSVADVSECAGFR 306 Query: 277 DQSHFSTVFKQRFGMTPGEYRRK 299 D SHFS +F+ FG +PG YR++ Sbjct: 307 DVSHFSRLFRSTFGSSPGLYRKE 329 >UniRef50_A0SZ23 Putative transcriptional activator araC family n=2 Tax=Janthinobacterium lividum RepID=A0SZ23_9BURK Length = 352 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 67/286 (23%), Positives = 124/286 (43%), Gaps = 20/286 (6%) Query: 28 LTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDE 87 L+ + LDT+ + T V R+ Q + S D+ VF ++ Q I+E Sbjct: 69 LSNGFHAELDTYLLPDMAYLDSRTDAVTQLRSNQRI--STDSMRDFVFHIAVQGIIETST 126 Query: 88 RQVQIGA----GDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDA 143 + A I LD ++P S+ + ++ LPR + + P + I + Sbjct: 127 ARASAKALQYTPGILALDMNQPMSMARPTRAHVLAFFLPRAAVSAHLPDAEAIHGRIVGY 186 Query: 144 DLPMVQLSHRLLQESMNN-PALSETESEAALQAMVCLLRPVLHQRESVQPR-----RERQ 197 P+ ++ L+ P+L + E ++ L+ +++ ++ R Sbjct: 187 TTPLTRMLLGYLKILCQRLPSLPADQQEQTIRTCARLIIAAFAKQQRLEEHGRAVARAAL 246 Query: 198 FQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCA--- 254 ++ I N+ EE L P+ + ++ ++YR+F +G + A YIR+ RL A Sbjct: 247 QGQIEHYIQANLHEEHLTPDGVMRAFPVARSTIYRLFESQGGLAA-YIRHCRLRDAAREL 305 Query: 255 DAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKF 300 ++RH A + IG GF+ S FS F + +GM+P +YR +F Sbjct: 306 TSMRHLA----VTQIGLGLGFNSASDFSRAFSRAYGMSPRDYREQF 347 >UniRef50_B6A2N3 Transcriptional regulator, AraC family n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2304 RepID=B6A2N3_RHILW Length = 314 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 61/232 (26%), Positives = 102/232 (43%), Gaps = 9/232 (3%) Query: 74 VFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQ 133 + Q G A + Q + + + + D RP L +Q+ L LPR L Q + Sbjct: 81 ILQTEGSASITQGGLHAPVSSNALVIYDPRRPYVLTNSTPVRQLLLQLPRQALPQAAVER 140 Query: 134 --KPICAERLDADLPMVQLSHRLLQESMNNPA-LSETESEAALQAMVCLLRPVLHQRES- 189 P A + + LS L++ +M+ + L E + Q M+ L+R ++ + Sbjct: 141 LAVPFTAHAEHDGMCGILLS--LMETTMHEISHLDEARRSSVGQTMIDLVRTMIGDGATA 198 Query: 190 --VQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRN 247 V + ++ I NI L IA G SVR +YR F + L + YI + Sbjct: 199 GLVANPLDLLLARIKDFIAGNIARPDLTVAMIARRMGCSVRYVYRAFEAERLTPSDYIWD 258 Query: 248 RRLDFCADAIRHAADDE-KLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRR 298 RL A +R A +++ I F GFS +HFS F+ R+ ++P ++R+ Sbjct: 259 LRLQQAAAKLRAAGGHSGEISEIAFALGFSSSAHFSRAFRARYTVSPSQWRK 310 >UniRef50_A5V7R9 Transcriptional regulator, AraC family n=2 Tax=Sphingomonas wittichii RW1 RepID=A5V7R9_SPHWW Length = 367 Score = 67.4 bits (163), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 68/277 (24%), Positives = 116/277 (41%), Gaps = 20/277 (7%) Query: 40 FAKGLKLSTVTTSGVNL--SRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDI 97 FA + +S + GV RT +EV+ + F + G + Q+ R I G Sbjct: 52 FAGYIPISRHRSIGVRTVTRRTLKEVRSNTSDTFLIWLPIRGAVTITQNGRTATIEPGSF 111 Query: 98 TLLDASRPCSLYWQESSKQ----ISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHR 153 L + P + + Q + P L+ Q P K +CA L +++ Sbjct: 112 ALSYGNEPLCIATLSDADQEHLSYQITAPAHLVSQAIPEPKRLCAIPFSTTLGGARIARE 171 Query: 154 L---LQESMNNPALSETESEA-ALQAMVCLLRPVLHQRESVQ-----PRRERQFQKVVTL 204 L L E +N L +EA AL + L R V +E V+ RE + Q+++ Sbjct: 172 LFLSLYEEADN--LDRASAEALALSGLHALFRTV--NQEGVEHGRSLSVREVKLQRLMDY 227 Query: 205 IDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAADDE 264 ++ N + L E +A + G+S R L+ + KG Y+ RL+ + A Sbjct: 228 LELNYSDSELTTEKVAKDCGISTRYLHYLLKSKGTRFYDYLWQARLNNAYQQLTDPALAR 287 Query: 265 K-LAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKF 300 + ++ I + GF +HFS F+ +F +P E R++ Sbjct: 288 RTISEIAYAIGFKSSAHFSRAFRNQFARSPREVRQEM 324 >UniRef50_D0MC89 Putative AraC-type regulatory protein n=3 Tax=Vibrio RepID=D0MC89_VIBSE Length = 269 Score = 67.4 bits (163), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 58/228 (25%), Positives = 106/228 (46%), Gaps = 25/228 (10%) Query: 89 QVQIGAGDITLL---DASRPCSLYWQESSKQISLLLPRTLL---EQYFPHQKPICAER-- 140 Q ++ AGD TL D S ++ ++ K ++L+ L ++ P + ER Sbjct: 44 QFELKAGDFTLYNSADLSSAEAIPSEKGFKALALVFNPNLFCDFKKAHPMLRSKTEERRF 103 Query: 141 ----LDADLPMVQLSHRLLQ-ESMNNPALSETESEAALQAMVCLLRP----VLHQRESVQ 191 A + QL L+ S N P ++ AL +++ + P ++ S+ Sbjct: 104 YPFSAQASSEVAQLKDTLVNLASRNAPDYTQGHIAMALLSLMVEVEPNILSIIDDASSLS 163 Query: 192 PRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLD 251 QK + I++NI ++I E +A MS+ +L R A + L +Q ++ +R++ Sbjct: 164 DS-----QKAIKYIENNIEKDITL-EGLAAHMSMSIATLKRRLAAEDLSFSQILKVKRIN 217 Query: 252 FCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRK 299 F A +R + ++ + I F GF +HFST FK + MTP ++R + Sbjct: 218 FAATQLRMS--EKSITEIAFESGFKSAAHFSTAFKSVYNMTPKDFRNQ 263 >UniRef50_C6XP49 Transcriptional regulator, AraC family with acetamidase/formamidase activity n=2 Tax=Alphaproteobacteria RepID=C6XP49_HIRBI Length = 771 Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 60/242 (24%), Positives = 108/242 (44%), Gaps = 20/242 (8%) Query: 71 FYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTL--LEQ 128 F+ + L G + + I GDI ++ P L + S+ + + +P TL L+ Sbjct: 71 FWMILALEGGVTVTSSKSSKDIKEGDIIYGGSNTPIKLTLLKESRFLIICVPDTLPVLKS 130 Query: 129 YFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETES----EAALQAMVCLL---- 180 P QK I L ++ M ++ LL+ + A + E AL + Sbjct: 131 RVPLQKDIS--NLVSETTMGRMFSGLLRSVADVIADVTDDQLRPIETALPEFIAATLINN 188 Query: 181 ---RPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADK 237 + + + ER FQ + + D L IA E G+S R L ++F Sbjct: 189 APAKELGGAAGAKAALLERIFQSIEIRLSD----PDLNVYQIAKEQGVSTRYLQKLFETT 244 Query: 238 GLVVAQYIRNRRLDFCADAIRHAADDEK-LAGIGFHWGFSDQSHFSTVFKQRFGMTPGEY 296 G + ++++RRL+ C +R ++ ++ I F WGF+D + FS F++++G++P +Y Sbjct: 245 GDSFSHFVKDRRLERCRLDLRSPLHAQRTISEILFQWGFNDSASFSRAFREKYGISPRDY 304 Query: 297 RR 298 RR Sbjct: 305 RR 306 >UniRef50_C6C3E5 Transcriptional regulator, AraC family n=1 Tax=Dickeya dadantii Ech703 RepID=C6C3E5_DICDC Length = 296 Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 47/149 (31%), Positives = 73/149 (48%), Gaps = 4/149 (2%) Query: 154 LLQESMNNPALSETESEAALQAMVCLLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEI 213 L QE M + LS SE L + L H Q Q ++ + D+I + Sbjct: 134 LTQECMKSDPLSLQLSEVLLMQIALLALRYRHAPGETQLADAHQLDLLMNALRDSIAQP- 192 Query: 214 LRPEWIAGETGMSVRSLYRMFADK-GLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFH 272 R E + G S+RSL F + G+ V+QY+R RL + +R+ D + ++ + Sbjct: 193 FRLEAFCQQYGFSLRSLRSRFKQQTGMSVSQYLRQLRLCRAMELLRY--DRQTISEVAAQ 250 Query: 273 WGFSDQSHFSTVFKQRFGMTPGEYRRKFR 301 GF D ++FS VF Q FG+TP YR++F+ Sbjct: 251 CGFDDSNYFSVVFHQAFGVTPSSYRQRFQ 279 >UniRef50_C9NEM1 Transcriptional regulator, AraC family n=1 Tax=Streptomyces flavogriseus ATCC 33331 RepID=C9NEM1_9ACTO Length = 297 Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 32/91 (35%), Positives = 57/91 (62%), Gaps = 2/91 (2%) Query: 205 IDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAI--RHAAD 262 +++N+ + L PE IA +SVR L+++FA +G+ V+++I+ RRL+ C + R A Sbjct: 196 VNENLFDRGLSPESIAARHHISVRYLHKLFAGEGVTVSRWIQQRRLEECLRELGRRGGAP 255 Query: 263 DEKLAGIGFHWGFSDQSHFSTVFKQRFGMTP 293 +A +G WGF + +HFS F+ +G++P Sbjct: 256 RPAVAVVGKRWGFGNAAHFSRSFRTAYGISP 286 >UniRef50_Q7MEL5 AraC-type DNA-binding domain-containing protein n=10 Tax=Vibrio RepID=Q7MEL5_VIBVY Length = 275 Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 39/109 (35%), Positives = 57/109 (52%), Gaps = 6/109 (5%) Query: 194 RERQF---QKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRL 250 R QF QK++ I+ NI EEI E +A GMS +L R A + + +Q ++ +R+ Sbjct: 163 RATQFSETQKIIQFIESNIEEEI-SLETLAKHMGMSTATLKRRLAAEEMSFSQLLKIKRI 221 Query: 251 DFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRK 299 A +R D+ + I + GF +HFST FK MTP E+R K Sbjct: 222 SHAATQLR--VTDKSITTIAYESGFKSAAHFSTAFKAVQQMTPKEFRAK 268 >UniRef50_A8L0T7 Transcriptional regulator, AraC family n=3 Tax=Actinomycetales RepID=A8L0T7_FRASN Length = 298 Score = 66.6 bits (161), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 66/278 (23%), Positives = 114/278 (41%), Gaps = 13/278 (4%) Query: 32 YTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAI-MEQDERQV 90 + G +D G + +T S ++ R+ ++ D +Y +F + G I +EQ Sbjct: 13 FRGRIDVSGLSGTTVVALTFSPLSGRRSPALIRHHDPEDYY-LFMVHGSPIRLEQSGNVT 71 Query: 91 QIGAGDITLLDASRPCSLYWQESSKQ--ISLL-LPRTLLEQYFPHQKPICAERLDADLPM 147 + AGD+ L D S P + + + +Q ++L+ LPR L + L P Sbjct: 72 CLTAGDMALFDTSHPLAADFLDHGRQKRVTLMRLPRASLPLPGGTTDCLLGNTLLTRTPT 131 Query: 148 VQLSHRLLQESMNNPALSETE-----SEAALQAMVCLLRPVLHQRES--VQPRRERQFQK 200 L + L N A + V L + + + V+ R + Sbjct: 132 GALLGQFLSGFRENAAACGSAELHRLGRIGFDLAVTFLASHIDAQHTLPVETREHVLRAR 191 Query: 201 VVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFC-ADAIRH 259 + I+ N+ + LRP IA +SVR+L+++F + V+ IR RRL+ C D + Sbjct: 192 IDAFIEHNLGDRGLRPATIAAHHHISVRTLHQLFQGQPETVSAMIRRRRLERCKVDLLNP 251 Query: 260 AADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 + I WGF + FS F+ +G P + R Sbjct: 252 QLRHHTIGDISARWGFRHPADFSRAFRAAYGAPPRDLR 289 >UniRef50_D0YX27 Hypothetical transcription regulator n=1 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0YX27_LISDA Length = 234 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 39/107 (36%), Positives = 57/107 (53%), Gaps = 4/107 (3%) Query: 194 RERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFAD-KGLVVAQYIRNRRLDF 252 RE + + +ID+N+ LR E +A S R+F G+ + QYI +RLD Sbjct: 126 REEPLRPALKIIDENLSSP-LREEDLAAACHYSPTYFSRLFHSVMGVTLKQYIIKKRLDM 184 Query: 253 CADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRK 299 + +AD EK+A I GF D S+FS VFK+ G +PGE+R + Sbjct: 185 ACGLL--SADKEKIAVIALTTGFKDVSYFSRVFKKHLGCSPGEFRTR 229 >UniRef50_C3VA25 Putative transcriptional regulator IemR n=1 Tax=Pseudomonas nitroreducens RepID=C3VA25_9PSED Length = 316 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 63/266 (23%), Positives = 122/266 (45%), Gaps = 19/266 (7%) Query: 38 THFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQL-SGQAIMEQDERQVQIGAGD 96 + F G S + S V R + + + +++A + Q+ SG + R+V + GD Sbjct: 53 SRFGAGELYSAIAPSQV--LRHFNDQRNANEAEHSYLIQIRSGALGVASGGRKVILANGD 110 Query: 97 ITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQ 156 +++D+ + +L S++ + + P + L + + + + A R+DA++ R L Sbjct: 111 CSIVDSRQDFTLSSNSSTQGVVIRFPVSWLGAWVSNPEDLIARRVDAEIGW----GRALS 166 Query: 157 ESMNN-------PALSETESEAALQAMVCLL--RPVLHQRESVQPRRERQFQKVVTLIDD 207 S++N S S A AM+ L V + V R+ R+ ++V ++ Sbjct: 167 ASVSNLDPLRIDDLGSNVNSIAEHVAMLISLASSAVSSEDGGVALRKMREVKRV---LEQ 223 Query: 208 NIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAADDEKLA 267 + + L PE ++ + G+S R L+ +FA G + + RL + + + Sbjct: 224 SFADANLEPESVSSQLGISKRYLHYVFAACGTTFGRELLEIRLGKAYRMLCATSGSGAVL 283 Query: 268 GIGFHWGFSDQSHFSTVFKQRFGMTP 293 + GFSD SHFS FK+R+G++P Sbjct: 284 KVAMSSGFSDSSHFSKKFKERYGVSP 309 >UniRef50_Q8VUZ3 Cad gene transcriptional regulator n=2 Tax=Alphaproteobacteria RepID=Q8VUZ3_9BRAD Length = 336 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 58/235 (24%), Positives = 101/235 (42%), Gaps = 25/235 (10%) Query: 80 QAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAE 139 +A + R++ I G LLD +P L + +++ L L ++ PH + A Sbjct: 97 EAQLHHYGRRLTIPEGSFVLLDNQQPFELLREAGGSSLAVRLEDAWLRRWLPHPTAVVAT 156 Query: 140 ----RLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLL--RP---VLHQRESV 190 R + + E + + L + L A + L+ RP + + V Sbjct: 157 LTGTRDGWGSTLATALRTIASEGLADAILPRSVIADQLGAFLALIYGRPAQGIGRYQSEV 216 Query: 191 QPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRL 250 R +R Q + + + L P IA G+S R L+ +FA GL + + RL Sbjct: 217 LVRLKRHMQ-------ERLHDPELDPASIASSVGISKRHLHGLFAQTGLSFGAVLMDMRL 269 Query: 251 DFCADAIRHAADDEKLAG-----IGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKF 300 + A+ +R D + G + + GF++ SHFS F+ +FG+TP +YR +F Sbjct: 270 ERAAEMLR----DRRFVGYRGCDVAWSCGFANASHFSRRFRVKFGVTPVDYRDEF 320 >UniRef50_B5GLL9 AraC family regulatory protein n=2 Tax=Streptomyces clavuligerus ATCC 27064 RepID=B5GLL9_STRCL Length = 337 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 62/252 (24%), Positives = 101/252 (40%), Gaps = 10/252 (3%) Query: 58 RTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLY--WQESSK 115 RT + ++ D F G + Q +G GD L D S P ++ SS Sbjct: 62 RTPRLIRQGDPEHFVLGVITHGAKKISQHRTDTVLGTGDGVLFDTSHPYAVGTPGTGSSG 121 Query: 116 QISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQ- 174 L +PRTLL + P + +R + + + + A + L Sbjct: 122 MTFLHIPRTLLSFHAPRLDTVLPQRFPTGHGLAAILRHFIDSLHTHTAECTPQERRILDR 181 Query: 175 -AMVCLLRPVLHQRES--VQPRRERQ---FQKVVTLIDDNIREEILRPEWIAGETGMSVR 228 A+ + V Q ++ P Q +V IDD++ + L P +A +S+R Sbjct: 182 TALDLVTGFVAEQTDTWAGAPADTPQRVLLHRVDAFIDDHLGDPRLDPRAVADHHHISLR 241 Query: 229 SLYRMFADKGLVVAQYIRNRRLDFC-ADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQ 287 +L +F + +A I+ RRLD C AD + I WGF + FS F+ Sbjct: 242 TLQALFRTREEGIAASIKRRRLDRCRADLSAPGQAGVPIGVIAARWGFGRPAGFSRAFRD 301 Query: 288 RFGMTPGEYRRK 299 +G++P EYR + Sbjct: 302 TYGISPQEYRNQ 313 >UniRef50_A5EGC6 Transcriptional regulator, AraC family n=1 Tax=Bradyrhizobium sp. BTAi1 RepID=A5EGC6_BRASB Length = 317 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 70/266 (26%), Positives = 107/266 (40%), Gaps = 4/266 (1%) Query: 32 YTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQ 91 + GV+D LKLS V S + R + + + + Q++G + Q R+ + Sbjct: 41 FAGVIDQADLGDLKLSRVRASAHGVWRRAEHARSARADLVFVNLQVAGVGVTAQGGRERR 100 Query: 92 IGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLS 151 D+ + D P ++ +E + I LPR L + + R A + +L Sbjct: 101 TAPFDLAVADTLAPFAIAHREPFELICAGLPRALAPPELMARGGVALSRTPAAREIARLL 160 Query: 152 HRLLQESMNNPALSETESEAALQAMVCLLRPVLHQRESVQPRRERQFQKVVTLIDDNIRE 211 NPA + T + AA + + LL + P R V I N R+ Sbjct: 161 L-GCAGLALNPASTPTAAAAAARCFLDLLASAADSLDEA-PVRGLTAAHVRDYIGQNFRD 218 Query: 212 EILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGF 271 L A G+S R + ++ A G + + RL+ A A AA +A I + Sbjct: 219 ATLSAARAARAFGVSERHIQKLLAGGGASFGETLAGLRLE--AAAQALAAGGGSVAQIAY 276 Query: 272 HWGFSDQSHFSTVFKQRFGMTPGEYR 297 GFSD S F FK RFG TP YR Sbjct: 277 ECGFSDLSTFHRAFKARFGETPAAYR 302 >UniRef50_C8SUL6 Transcriptional regulator, AraC family n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SUL6_9RHIZ Length = 339 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 54/222 (24%), Positives = 101/222 (45%), Gaps = 10/222 (4%) Query: 85 QDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDAD 144 Q R+ +G G+ L+ A+ + + + ++++PR +L Q FP A ++ A+ Sbjct: 119 QAGREYGVGRGEAVLVTAAEALKMGGADWNVWTNVVVPRAILTQAFPQIDDRLALKIGAE 178 Query: 145 LPMVQLSHRLLQ-----ESMNNPAL--SETESEAALQAMVCLLRPVLHQRESVQPRRERQ 197 + L R Q + +P L TE+ L +V + + ++ R + Sbjct: 179 NEALDLLKRYCQLLEAGRPLASPDLIAHATETIVDLIGLVTGAKGQRAELAGLRGLRAAR 238 Query: 198 FQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAI 257 Q ++ I DN + + + +A E G+S R ++ + + G + + RL + Sbjct: 239 LQAIMAKIADNFADPGISAQGVAQELGLSARYVHDLLQETGTSFTERVLELRLQRAHKML 298 Query: 258 --RHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 RH DD +++ I GFSD S+F+ F++RFG TP R Sbjct: 299 SQRHN-DDMRVSDIAMISGFSDVSYFNRCFRRRFGHTPTSAR 339 >UniRef50_UPI0001B58744 AraC family transcription regulator n=1 Tax=Streptomyces sp. C RepID=UPI0001B58744 Length = 329 Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 67/271 (24%), Positives = 115/271 (42%), Gaps = 25/271 (9%) Query: 44 LKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDAS 103 ++ S + S + RT ++ D + G + Q + IGAGD+ L D S Sbjct: 48 IRASRFSLSPLRSRRTAPMIRRGDPEEYQLALLRKGATSLSQYRSECTIGAGDLMLWDTS 107 Query: 104 RPCSLYWQESSKQIS---LLLPRTLLEQYFPHQKPICAERLDADL----PMVQLSHRL-- 154 RP + Q+ L+LPR ++ P+ +RLD L P + ++ L Sbjct: 108 RPSDNQMLTAGGQVQATILMLPRNIM--------PLRTQRLDQVLARRIPGMGMAAILAS 159 Query: 155 LQESMNNPALSETESE-------AALQAMVCLLRPVLHQRE-SVQPRRERQFQKVVTLID 206 S+ + T E A A CL + + + + + R + Q++ I+ Sbjct: 160 FMTSLEDHGAECTPEELRRLSTVAVDLAAACLAQQLDAEDQLPAEVRAQALVQRIHAFIE 219 Query: 207 DNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAADDEKL 266 N+ + L P +A +SVR+L+++F + A+ R R AD A ++ Sbjct: 220 HNLGDPELNPSAVAARHHISVRTLHQLFHGQESTNARIRRRRLERCRADLADPALAGRRV 279 Query: 267 AGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 I WGFS FS F++ +G+TP E+R Sbjct: 280 GAIAARWGFSGPVVFSRSFREAYGVTPTEFR 310 >UniRef50_C5CTZ5 Transcriptional regulator, AraC family n=1 Tax=Variovorax paradoxus S110 RepID=C5CTZ5_VARPS Length = 324 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 70/300 (23%), Positives = 115/300 (38%), Gaps = 19/300 (6%) Query: 16 INQVCGNFTGRLLTERYTG----VLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWF 71 I VC F +T G L++ + ++ V S ++ R + + S ++ Sbjct: 27 IGAVCEGFLEMDVTSSLAGSFGATLESAPLGAIGVNRVRGSAQDVYRRRRAIAQSRSNYY 86 Query: 72 YTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFP 131 Y + + + QD R ++ GD+ L+D+ R L +S+ +SL LP +E + P Sbjct: 87 YLLCKTDSPWVAVQDGRSARMLPGDLVLVDSRRCYELRLLQSADTLSLELPTAWVESWLP 146 Query: 132 HQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAAL-----------QAMVCLL 180 A R+D ++ Q+ AL A L C Sbjct: 147 DAGGQVARRIDGQSGWGRVLSGFAQQLSPQGALKPPLPAALLTDHLGGLLALAAGTACDA 206 Query: 181 RPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLV 240 ES + R +V+ + E L +A G+S RSL+R + Sbjct: 207 GGSAAPSESARAALRR---RVLDATRERHAEPGLTAAGVARGLGISERSLHRCLCEGSTT 263 Query: 241 VAQYIRNRRLDFCADAIRHAADDE-KLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRK 299 A + R+ + A D +A IG G +D SHF F + GMTPG +RR+ Sbjct: 264 FAAALTGFRMQVARRMLGDARFDRLSIAEIGLRVGLADASHFVRQFSRHLGMTPGAWRRQ 323 >UniRef50_Q2T8K4 Putative transcription regulator protein n=4 Tax=Burkholderia thailandensis RepID=Q2T8K4_BURTA Length = 352 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 67/253 (26%), Positives = 114/253 (45%), Gaps = 21/253 (8%) Query: 58 RTWQ--EVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSK 115 RT Q G D +F + + Q+ E V+IGA + D +RP + Q Sbjct: 78 RTIQRTHCNGCDHYFFCASREHAWQSTSETG--IVRIGARQLYFADPARPLCIDVQSGDV 135 Query: 116 QISLLLPRTLLEQYFPHQKPICAERLDADLP---MVQLSHRLLQESMNNPALSETESEAA 172 I L++PR + + L A L +V L+ + A+S +ES+A Sbjct: 136 AI-LIVPRNFIPIDLSSRHGTVFSGLMASLAAQYIVGLAEHI-------GAISHSESKAI 187 Query: 173 LQAMV-CLLRPVLHQRESVQPRRERQ----FQKVVTLIDDNIREEILRPEWIAGETGMSV 227 + LL + + P R +KV T I++++ L + I + G+S Sbjct: 188 GDVTLNMLLAATSATHDPIGPVRTNLEIELTRKVKTYINNHLESPKLCVDSICHDIGLSR 247 Query: 228 RSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAADDE-KLAGIGFHWGFSDQSHFSTVFK 286 +LYR+F+ + L VA+YI+ RL +RH+ + +++ + +GF S F+ +FK Sbjct: 248 AALYRLFSRENLGVAEYIKLLRLRKIYYILRHSTESRIRISELADRYGFCYNSSFAKLFK 307 Query: 287 QRFGMTPGEYRRK 299 ++FG P E RR Sbjct: 308 RQFGCAPSEIRRN 320 >UniRef50_Q47CB9 Transcriptional regulator, AraC family n=1 Tax=Dechloromonas aromatica RCB RepID=Q47CB9_DECAR Length = 321 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 53/244 (21%), Positives = 108/244 (44%), Gaps = 20/244 (8%) Query: 71 FYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQ-- 128 ++ F L G E + + AG + L++ P L + E ++ + +P +L + Sbjct: 76 YHVQFILRGHCRYELYRESLSLSAGHVLLINPEEPIDLTYSEDCEKFIVRIPSSLFSEAC 135 Query: 129 -----YFPH------QKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMV 177 + P+ Q P E LD+ + ++ L + + SM P + + + ++ Sbjct: 136 IEHSWFKPNECIKFNQVPYKFEELDSLIQLLGLLCQEAESSMATPQMLQHYNRVVTGKLM 195 Query: 178 CLLRPVLHQRESVQPRRER-QFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFAD 236 +L+ H P + F ++V I++NI+ +I E +A + +S+RSLY +F Sbjct: 196 TMLK---HNVSLTPPSLQSVSFDRLVKYIENNIKRDI-TAEELAQYSHLSLRSLYLLFEK 251 Query: 237 KGLVVAQ-YIRNRRLD-FCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPG 294 + +IR ++L+ + I + + + +GF+ FS ++K FG+ P Sbjct: 252 NAKTTPKNFIRQKKLEQVYSTLINPTSHVANVTAVALEYGFTHLGRFSELYKSNFGVLPS 311 Query: 295 EYRR 298 E R Sbjct: 312 ETIR 315 >UniRef50_Q1YEQ1 Putative transcriptional regulator n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YEQ1_MOBAS Length = 349 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 70/253 (27%), Positives = 105/253 (41%), Gaps = 24/253 (9%) Query: 58 RTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRP----CSLYWQES 113 R+ Q ++ F LSG ++E + + G+I +LD RP C + Sbjct: 75 RSAQRIRQDGFEHFVMQLNLSGVLVVETADGATTVKPGEIIILDTGRPYGNRCGNAHVLT 134 Query: 114 SKQISLLLPRTLLEQYFPHQKPICAER--LDADLPMVQLSHRLLQESMNNPALSETESEA 171 ++ R L H + + AER L AD M L+ + T Sbjct: 135 FSVARYVVERAYLGGQDLHGRILGAERGALLADF-MASLTRN-----------ARTLPAD 182 Query: 172 ALQAMVC----LLRPVLHQRESVQPRRERQFQKVV-TLIDDNIREEILRPEWIAGETGMS 226 A+ MV LL L Q + R K+ LI++ + L P IA + G+S Sbjct: 183 AVNGMVGIFSELLMITLRQDDGTASAEARGKLKLAQELIEEGLSRHDLDPAVIAAKAGIS 242 Query: 227 VRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFK 286 LY MF G VA YIR RR+ + D +A + F GF+ +SH S F+ Sbjct: 243 RSRLYEMFKTHG-GVASYIRRRRVHRFRALLSQRRDMRSIAELAFACGFASESHASRTFR 301 Query: 287 QRFGMTPGEYRRK 299 + F M PG++RR+ Sbjct: 302 EVFAMPPGQFRRR 314 >UniRef50_B7WVN7 Transcriptional regulator, AraC family n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WVN7_COMTE Length = 326 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 66/264 (25%), Positives = 104/264 (39%), Gaps = 12/264 (4%) Query: 44 LKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDAS 103 L ++ + + + RT Q V+ + LS A Q+ + + GD+ + D Sbjct: 59 LAMANIDGNAHVIERTPQLVRQHPKESVFVSLVLSSGAFFYQEHSCIHLAPGDLVIYDTR 118 Query: 104 RPCSLYWQESSKQISLLLP-----RTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQES 158 + Q + P R P PIC A L+H + Sbjct: 119 HAYLFGFTHQMHQFLVDTPADWFYRNCSRAQLP--GPICVS--GAAGSGRVLNHAFQKLV 174 Query: 159 MNNPALSETESEAALQAMVC-LLRPVLH-QRESVQPRRERQFQKVVTLIDDNIREEILRP 216 N A E + LQ C LLR +L + R ID+++ L Sbjct: 175 GNAMARPEGVDQDRLQFEACDLLRTMLAGEAAGSSALRASHLLAARAHIDEHLHRHSLDA 234 Query: 217 EWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGF 275 +A +G+S+R L RM +G V + I RRL+ A +R AA +A I + GF Sbjct: 235 SEVAAASGVSLRHLNRMLQAEGHSVTELILIRRLERAAIELRQAALGRYSIAEIAYRCGF 294 Query: 276 SDQSHFSTVFKQRFGMTPGEYRRK 299 + Q+HF+ F+ GMTP + R + Sbjct: 295 ASQAHFARRFRSHHGMTPTQMREQ 318 >UniRef50_Q92PG5 Transcription regulator AraC family n=1 Tax=Sinorhizobium meliloti RepID=Q92PG5_RHIME Length = 338 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 60/229 (26%), Positives = 103/229 (44%), Gaps = 16/229 (6%) Query: 78 SGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQ-ISLLLPRTLLEQYFPHQKPI 136 +G I E + + AG +++LD S C L E +++ LPR+L+E P+ + Sbjct: 86 TGGWIAETARGEFEGRAGQVSVLDLS--CELISDEPDCHLVAMFLPRSLIEDRLPNLGGL 143 Query: 137 CAERLDADLPMV------QLSHRL-LQESMNNPALSETESEAALQAMVCLLRPVLHQRES 189 M+ L+ RL S + AL+ AA Q + L P L E+ Sbjct: 144 HGSAPTGPYAMLLAEYLDMLARRLPFLHSGDETALAG----AACQMLAACLAPSLANVEA 199 Query: 190 VQPRRERQF-QKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNR 248 +P E ++ I+ ++ L + I G+S R+L+R+F +G V+ YI+ R Sbjct: 200 ARPGLELVLLRRAKRYIEGHLNSSALNIDAICNIVGVSRRTLFRLFEQEGGVL-HYIQGR 258 Query: 249 RLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 RL+ + + +++ I +GF HF+ FK ++G T E R Sbjct: 259 RLERIRAVLSDPNETRRISDIAAEFGFLRGDHFARAFKHQYGETAREIR 307 >UniRef50_P72312 Nitrilase regulator n=1 Tax=Rhodococcus rhodochrous RepID=P72312_RHORH Length = 319 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 59/272 (21%), Positives = 119/272 (43%), Gaps = 11/272 (4%) Query: 32 YTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQ 91 + G + T ++++T ++ ++RT + ++ + + Q +G A+++Q R + Sbjct: 40 FIGTVSTGNLGTVRIATSSSLPQQITRTRRLIRQDEREYLMVGVQSAGHALVQQHGRTAR 99 Query: 92 IGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLS 151 +G G + D P + + + PR + A + D + ++ Sbjct: 100 VGRGGLVFWDTRHPYDILFPTDWRMSVFQFPRYSFGFTEDFIGRMTAVNVGGDRGIGRVV 159 Query: 152 HRLLQESMNNPA----LSETES--EAALQAMVCLLRPVLHQRESVQPRRERQFQKVVTLI 205 + S+N+ L+E S +A+ + +R L + + + + V+ I Sbjct: 160 SSFMT-SINDATDAGDLAEVASLHNSAVDLLSAAIRTELADQAAAS---DGLLECVLAYI 215 Query: 206 DDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAADDE- 264 N+ + L IA E +SVR+L+R+F+ G VA++IRN RL+ + Sbjct: 216 RQNLADPNLCASQIAAEHNVSVRTLHRLFSATGQGVAEHIRNLRLERIKTELADPTSRRY 275 Query: 265 KLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEY 296 ++ + WGF D S FS FK +G+T E+ Sbjct: 276 TISALARKWGFLDPSTFSRAFKDAYGITAREW 307 >UniRef50_B1T3D6 Transcriptional regulator, AraC family n=1 Tax=Burkholderia ambifaria MEX-5 RepID=B1T3D6_9BURK Length = 350 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 68/244 (27%), Positives = 111/244 (45%), Gaps = 21/244 (8%) Query: 68 DAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLE 127 D + +F SG E R + G GDI L D +R + + S IS+++ R+ ++ Sbjct: 89 DHYVIRLFT-SGMRDGECAGRPITSGPGDIGLFDLARTSEISTRGGS-SISVIMARSRID 146 Query: 128 QYFPHQKPICAERLDADLPMVQL-SHRLLQESMNNPALSETESEAALQAMVCLLRPVLHQ 186 + + + L A P+ L + LL L+ E+EA AM+ LL L++ Sbjct: 147 KAMG-GRCLHGVVLRAGRPLTTLMADYLLSLVKVTGELTGIEAEAIESAMIALLAAGLNE 205 Query: 187 RES---------VQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADK 237 + V RR K++ ID N+ L + + + +S LYR+F + Sbjct: 206 ENAEGAGAFSGPVFLRR-----KIIEFIDANLTNSDLGLDLLIRQFRVSRARLYRIFDLE 260 Query: 238 GLVVAQYIRNRRLDFCADAIRHAADDE--KLAGIGFHWGFSDQSHFSTVFKQRFGMTPGE 295 G VA+ IR +RLD + + E + + + + FSD S F F++RFG+TP E Sbjct: 261 G-GVAKIIREKRLDAAYQVLARPTEKELRSITEVAYMFCFSDGSQFLRAFRRRFGVTPRE 319 Query: 296 YRRK 299 R K Sbjct: 320 ARIK 323 >UniRef50_Q2IYF7 Transcriptional regulator, AraC family n=1 Tax=Rhodopseudomonas palustris HaA2 RepID=Q2IYF7_RHOP2 Length = 326 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 61/242 (25%), Positives = 110/242 (45%), Gaps = 15/242 (6%) Query: 62 EVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLL 121 ++ GS+D F +F + EQ R G + LL+++ + + S+ I++ + Sbjct: 74 KIDGSED--FVFLFPIRKGLQYEQRGRSGLAMPGTVFLLNSAENYVIDVPDGSENITIKV 131 Query: 122 PRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETES-EAALQAMVCLL 180 R LL +CA A+ +V + L + +N P + + ++ ++CL+ Sbjct: 132 DRRLLIDRVKGIDGLCASMNIANSQLVPVVTTLGAQLLNLPPGEHADRLQQSVIDLICLM 191 Query: 181 RPVLHQRESVQPRR-------ERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRM 233 L RES Q + + ++ + N+ + L P+ A E +SVR L+++ Sbjct: 192 ---LDLRESAQDKTFIRQTLASSLYHRIDAYLQRNLHDCDLSPDHAAREHKISVRYLHKV 248 Query: 234 FADKGLVVAQYIRNRRLDFCADAI-RHAADDE-KLAGIGFHWGFSDQSHFSTVFKQRFGM 291 F G Q + RL I RH A L + + GF+ QS+FST +++RFG+ Sbjct: 249 FHFHGTSFGQRLLELRLQRAHYVISRHGATTTINLGQVAYECGFTSQSYFSTCYRKRFGL 308 Query: 292 TP 293 TP Sbjct: 309 TP 310 >UniRef50_B8H192 Transcriptional regulator n=3 Tax=Caulobacter RepID=B8H192_CAUCN Length = 446 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 65/222 (29%), Positives = 104/222 (46%), Gaps = 14/222 (6%) Query: 86 DERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPH---QKPICAERLD 142 D R G G I L+D SRP + + + ++L +PR L++ H + +E Sbjct: 203 DGRPADSGMGAIRLVDMSRPFDMT-TAAFETLNLAIPRATLDEQVDHIDFHGRVVSENT- 260 Query: 143 ADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPVLHQRESVQPRRERQFQKVV 202 A ++ R + +S+ ++ E+ A +A L + V R +K++ Sbjct: 261 ATGRILGAHMRAVWDSIET--ITTAEAALAAKAAATLFSAAILAHGEVAGADARPIEKML 318 Query: 203 -----TLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAI 257 + + + L PE + G+S LYR+F G V A +I+ RRLD D I Sbjct: 319 LASARDFVIGRLADPELSPEAVRQHLGVSRSLLYRVFEPAGGVSA-FIQARRLDQAFDEI 377 Query: 258 -RHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRR 298 R ++ + LA IG+ GF +HFS VF+ RFG+TPG RR Sbjct: 378 IRDQSERKTLAEIGYGLGFRSDAHFSRVFRARFGVTPGRLRR 419 >UniRef50_A7IDZ1 Helix-turn-helix-domain containing protein AraC type n=1 Tax=Xanthobacter autotrophicus Py2 RepID=A7IDZ1_XANP2 Length = 295 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 42/104 (40%), Positives = 60/104 (57%), Gaps = 4/104 (3%) Query: 195 ERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADK-GLVVAQYIRNRRLDFC 253 ER ++V LI D I EE L + +A E G+S RSL R F + G+ V QYI +RR+ Sbjct: 191 ERALRRVCELIVDRIAEE-LPLDALAREAGVSPRSLSRAFNRRFGMSVHQYIVSRRVLKA 249 Query: 254 ADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 D + A+ D + + GFS QSH S VF+++ G+TP +R Sbjct: 250 KDLL--ASTDLPIVEVALEAGFSSQSHLSAVFRKQTGVTPSLFR 291 >UniRef50_P82606 Uncharacterized protein in nit 5'region n=1 Tax=Bacillus sp. OxB-1 RepID=YNI2_BACSX Length = 258 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 33/114 (28%), Positives = 64/114 (56%), Gaps = 4/114 (3%) Query: 17 NQVCGNFT----GRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFY 72 + +C F +L +TG ++T K +++S V + R+ ++++ S + +F Sbjct: 21 DAICDVFVKLDASQLSPHTFTGRMETGSLKDIQISEVNADSQRVVRSNRQIQKSVEDYFL 80 Query: 73 TVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLL 126 Q GQA ++QD+R+ ++ GD TL D++RP L++++ +QI PR+LL Sbjct: 81 VSLQTKGQAYIKQDQREARLQPGDFTLYDSTRPYVLHFEQPFQQIVFQFPRSLL 134 >UniRef50_C4NCJ6 AraC family transcriptional regulator n=1 Tax=Streptomyces sp. MK730-62F2 RepID=C4NCJ6_9ACTO Length = 348 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 9/103 (8%) Query: 200 KVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLD-----FCA 254 ++ ID N+ + L P +A +S+R L R+F +G +++IR RRLD C Sbjct: 239 RIRGFIDRNLGDPDLTPSLVASAHHISIRCLQRLFKAEGSTPSEWIRQRRLDNSRRELCD 298 Query: 255 DAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 ++R A+ E IG GF+ S FS VF+ R+G+ PG++R Sbjct: 299 VSLRSASIRE----IGLRNGFAQASDFSRVFRGRYGVPPGKFR 337 >UniRef50_Q2KTV5 AraC-family transcriptional regulator n=1 Tax=Bordetella avium 197N RepID=Q2KTV5_BORA1 Length = 318 Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 30/107 (28%), Positives = 57/107 (53%) Query: 192 PRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLD 251 P R ++ + ++ L P +A G+SVR L+ ++ +G ++++ +RL+ Sbjct: 207 PVRNAHLSRIEHYVRQHLGNADLNPTQVAQACGISVRYLHSLYQGQGQTFSEWLCGQRLE 266 Query: 252 FCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRR 298 + A+ +A I WGF+DQ+HFS ++K+R+G P + RR Sbjct: 267 RAHHTLLSASALHSIARIAQQWGFADQAHFSRLYKRRYGYPPSQARR 313 >UniRef50_B9NWW0 Putative transcriptional regulator n=1 Tax=Rhodobacteraceae bacterium KLH11 RepID=B9NWW0_9RHOB Length = 356 Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 62/254 (24%), Positives = 113/254 (44%), Gaps = 34/254 (13%) Query: 58 RTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQI 117 RT +++K S F +G E + V+ GD+ L+ ++P W+ Sbjct: 73 RTREKIKNSSFDSCAIWFVRNGHIFNEHNNDLVKAETGDLMLISHAQP----WKSHCVGR 128 Query: 118 SLLLPRTLLEQY---FPHQKPICAERLDADLP--MVQLSHRLLQESMNNPALSETESEAA 172 S + ++Y +P+ LD L + L+ E+ N ++E + Sbjct: 129 SFVSVGINCDKYSWMTSCNRPL----LDGSLKGLLRTFIAMLVDEAHN---ITEDQKPML 181 Query: 173 LQAMVCLLRPVLHQRESVQPRRERQFQKVVTL-------IDDNIREEILRPE----WIAG 221 Q+ LL S++P E ++ L + D ++ + RPE +I Sbjct: 182 AQSFSDLLAA------SIEPTAENRYYATTALNTSRLKIVRDFVQRHLERPELNVDFICK 235 Query: 222 ETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHF 281 G+S R+LY +F + G VA+YI+ RL C A+ + D + ++ I + +GF++ S F Sbjct: 236 SLGVSRRTLYNIFEEYG-GVAKYIKTARLQACYKALSNNNDQKYVSTIAYQYGFTNISLF 294 Query: 282 STVFKQRFGMTPGE 295 S FK+++G +P E Sbjct: 295 SRQFKEQYGFSPRE 308 >UniRef50_A5EN17 Transcriptional regulator, AraC family n=2 Tax=Bradyrhizobium RepID=A5EN17_BRASB Length = 391 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 66/264 (25%), Positives = 112/264 (42%), Gaps = 19/264 (7%) Query: 46 LSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRP 105 L + SG RT + + S ++G +Q+ AGD+ +LD ++ Sbjct: 99 LGSARASGQRFRRTAETIARSGVDHIILQLYVTGGYHGVAGPHPIQVEAGDLCVLDLAQ- 157 Query: 106 CSLYWQESS-KQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMN-NPA 163 +L + + + I+L++PR + + P + + L D + L R L P Sbjct: 158 -TLETRATPFEAITLVVPRPMFDARLPQVEDLHGLVLPHDGALAPLLARHLSALFEFAPR 216 Query: 164 LSETESEAALQAMVCLLRPVLH-QRESVQPRRERQFQKVVTLIDDNIREEILRPEW---- 218 +S E +AA+ + L+ L + E R + I I ++ PE Sbjct: 217 MSVDECQAAIDGTIALIAACLRGELERRAADRSVTADASLLRIRQYIEAQLASPELSADT 276 Query: 219 IAGETGMSVRSLYRMFADKGLVVAQYIRNRRL-----DFCADAIRHAADDEKLAGIGFHW 273 +A G+S SLYR+FA G +A YIR+RRL D A R +++ + W Sbjct: 277 VASHFGLSRASLYRLFAPLG-GIADYIRSRRLHRAFFDLAATGSRTV----RISEVARRW 331 Query: 274 GFSDQSHFSTVFKQRFGMTPGEYR 297 +HF+ +FK +G+TP R Sbjct: 332 QLGTDAHFTRLFKTAYGITPRAAR 355 >UniRef50_Q1LF91 Transcriptional regulator, AraC family n=1 Tax=Cupriavidus metallidurans CH34 RepID=Q1LF91_RALME Length = 333 Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 59/219 (26%), Positives = 95/219 (43%), Gaps = 15/219 (6%) Query: 91 QIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQL 150 ++G GD+ + D+S P +L + + L + Q+ P + R+DA+ + Sbjct: 105 RLGPGDVIMCDSSIPFNLEIGNDFNIVHVALSEAWIRQWLPAPSVLVGARIDANDSWGRA 164 Query: 151 SHRLLQESMNNPALSETESEAALQA--MVCLLRPVLHQRESVQPRRER-QFQKVVTLIDD 207 LQ S+ L++ + + LL + R +V P+ + + V+ I D Sbjct: 165 LSAFLQ-SLEPARLADYPLPRSFIGDHIGSLLAFLAQSRSAVPPKPAKTEGAAVLDRIRD 223 Query: 208 NI----REEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAADD 263 + RE L +A +SVRSL+R FA + R CADA+R Sbjct: 224 CMAGQSREATLCAADVAAAVSISVRSLHRHFARSSTTFGAVLMAMR---CADAVRMLESS 280 Query: 264 E----KLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRR 298 +A IG GF+D +HFS V + R G TP + RR Sbjct: 281 SFSRLTVAEIGRRAGFADAAHFSRVMRARVGHTPNQLRR 319 >UniRef50_C0ATQ8 Putative uncharacterized protein n=1 Tax=Proteus penneri ATCC 35198 RepID=C0ATQ8_9ENTR Length = 321 Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 57/243 (23%), Positives = 101/243 (41%), Gaps = 10/243 (4%) Query: 64 KGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPR 123 K S + F Q SG + + QD R + GD + D +RP S + +L+PR Sbjct: 76 KLSLEEHFQIEIQRSGTSHLTQDGRTAFLRQGDFCIFDMARPVSWSFDNDYSLFKILIPR 135 Query: 124 TLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQ---AMVCLL 180 L + + + A + + L + + + P L + A Q ++ L+ Sbjct: 136 EKLASRLGNTQNLTARAIRGNSITGSLVYSFVMRYI--PFLDSMPPQHAQQLADILLNLI 193 Query: 181 RPVLHQRESVQPR----RERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFAD 236 + P R F ++ ++ + L A G+SVR L +F + Sbjct: 194 TSAFSEFSIATPPQSLGRSTLFYFAQHYLEQHLSDPDLSVNECANACGISVRYLQMLFKE 253 Query: 237 KGLVVAQYIRNRRL-DFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGE 295 + V ++I +RL ++ A + ++ + + + GFSD S+ S FK F MTP E Sbjct: 254 QNTSVLRWIYQKRLENYKAALVNPLLAEKNITQLAYECGFSDISNLSRKFKSEFFMTPSE 313 Query: 296 YRR 298 YR+ Sbjct: 314 YRK 316 >UniRef50_P96427 AraC-type regulatory protein n=1 Tax=Rhodococcus fascians RepID=P96427_RHOFA Length = 277 Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 56/241 (23%), Positives = 109/241 (45%), Gaps = 25/241 (10%) Query: 75 FQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQK 134 + LSG+ I+ Q+ Q+ + +G I LY+ + S +++ L Q+ Sbjct: 43 YVLSGEVILSQNGVQISLKSGGI---------GLYYSDYSYTMTVTRASCLAVVTL-RQR 92 Query: 135 PICAERLDAD-------LPMVQLSHRLLQESMNNPA-----LSETESEAALQAMVCLLRP 182 E DA +P + + ++L +++++ + L+ + + A+ L Sbjct: 93 VGSREDFDAASGRGLRVVPNAEGTGKILSDTLHSTSREIGMLNTFTAHNVISAVRLLAWE 152 Query: 183 VLHQRESVQP--RRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLV 240 +H P ++ R +I+ N+ + L P+ +A + +SVR L+R F + Sbjct: 153 GMHPPHGHAPPDQQSRLVATARLMIEKNLSDPTLNPDLLARKLHVSVRQLHRAFEREERT 212 Query: 241 VAQYIRNRRLDFCA-DAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRK 299 ++ YI R++ CA D I + + I WG SDQS S +F++ G +P E+RR Sbjct: 213 LSAYIAYERIERCAADLIDPSLQQIPIGDISARWGLSDQSRLSRLFRELKGCSPSEFRRF 272 Query: 300 F 300 + Sbjct: 273 Y 273 >UniRef50_Q89UQ2 Transcriptional regulatory protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89UQ2_BRAJA Length = 401 Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 66/250 (26%), Positives = 112/250 (44%), Gaps = 23/250 (9%) Query: 63 VKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQ---ISL 119 +G D + T+ + G+ R+V + GDI LLD ++P ++ S + +++ Sbjct: 129 ARGGLDHYQMTLC-IEGEMRFSSGRREVTLRPGDICLLDMAQPNRTVFRGGSGRTHLMAI 187 Query: 120 LLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCL 179 ++ R++L H A L +D P RLL AL +++A + Sbjct: 188 IVQRSMLAPRLAHPDSATATLLPSDHPHA----RLLASHYAALALPPEPEAGSVEATIEA 243 Query: 180 LRPVLHQR--------ESVQPRRERQF--QKVVTLIDDNIREEILRPEWIAGETGMSVRS 229 + ++ E V+ R ER + I DN+ + L + +S + Sbjct: 244 IADIVAAAAGGTADIAEGVE-RAERHLYLAMIKRRIADNLETDALGVSELCRHFQISRAT 302 Query: 230 LYRMF-ADKGLVVAQYIRNRRLDFC-ADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQ 287 LYR+F AD GL A Y+R +RL+ + AA D++L + FS S F F++ Sbjct: 303 LYRLFEADGGL--AHYVREQRLNLAFQRLLSPAAQDKRLIDLAVGLRFSSDSTFIRAFRR 360 Query: 288 RFGMTPGEYR 297 +FG+TPGE R Sbjct: 361 KFGLTPGELR 370 >UniRef50_UPI0001B4D7D7 AraC family transcriptional regulator n=1 Tax=Streptomyces hygroscopicus ATCC 53653 RepID=UPI0001B4D7D7 Length = 320 Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 48/186 (25%), Positives = 81/186 (43%), Gaps = 10/186 (5%) Query: 121 LPRTLLEQYFPHQKPICAERLDADLP---MVQLSHRLLQESMNNPALSETESEAALQAMV 177 +PR+L ++ P + +D D P V RLL ++ + + L+ + Sbjct: 126 VPRSLYAEFTHGTPPSRPQVIDTDGPSGACVAALGRLLDGAVRSETFPRPDDATVLELLA 185 Query: 178 CLLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADK 237 L+ V + +++ ++ + L IA G+S R L R+FA + Sbjct: 186 VLI-----SGRRVPLSASAHYAAAREVVERHLHDPGLSATSIAARIGISERHLSRVFAAQ 240 Query: 238 GLVVAQYIRNRRLDFCADAIRHAADDEKL--AGIGFHWGFSDQSHFSTVFKQRFGMTPGE 295 V Q++R RLD + + E+L A + GF+ SHFST F +RFGM P + Sbjct: 241 DTTVPQFVRALRLDRAHRMLATSGGRERLTVAEVAHRCGFASASHFSTSFAKRFGMRPTD 300 Query: 296 YRRKFR 301 R+ R Sbjct: 301 LARQAR 306 >UniRef50_Q28K70 Transcriptional regulator, AraC family n=1 Tax=Jannaschia sp. CCS1 RepID=Q28K70_JANSC Length = 332 Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 60/258 (23%), Positives = 123/258 (47%), Gaps = 11/258 (4%) Query: 44 LKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAG-DITLLDA 102 L +S VT++G + R + ++ Y + G+ E +R + A D++++D Sbjct: 70 LDVSVVTSTGHEIRRLDRHIRHRSADLLYV--NILGRGRSEVSQRDTVVAAPMDVSIVDP 127 Query: 103 SRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMV--QLSHRLLQESMN 160 P S+ + + +S+ +P +E+ H + +L V L+ LL + Sbjct: 128 RAPYSIRQEAPFQLVSIAVPPDWVEREARHCHFLSRTAAGRELSSVVWGLAKMLLAIKPD 187 Query: 161 NPALSETESEAALQAMVCLLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIA 220 L+ + ++ ++ L P + ++ PR + + + + + LR E +A Sbjct: 188 QDGLATSLAQQIHHSLALL--PEMAGSDAT-PRVS--VAMLQSYVQRHFSQPDLRAEHLA 242 Query: 221 GETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAADDEK-LAGIGFHWGFSDQS 279 + G+SVR ++++F G V+++I + RL AD + AA + ++ I + G+SD S Sbjct: 243 RQFGISVRRVHQLFEPTGHTVSEFINDLRLARAADCLGDAALARRTISEIAWQVGYSDPS 302 Query: 280 HFSTVFKQRFGMTPGEYR 297 +F+ FK+R+G +P YR Sbjct: 303 YFTRRFKRRYGCSPRAYR 320 >UniRef50_A7LYG4 Sensor protein n=7 Tax=Bacteroides RepID=A7LYG4_BACOV Length = 1317 Score = 63.5 bits (153), Expect = 9e-09, Method: Composition-based stats. Identities = 45/153 (29%), Positives = 77/153 (50%), Gaps = 22/153 (14%) Query: 150 LSHRLLQESMNNPALSETESEAALQAMVCLLRPVLHQRESVQPRRERQFQKVVTLIDDNI 209 LS ++L + N ++S + + + VLH P E Q V I +NI Sbjct: 1184 LSRQMLLKDYFNSSMSSVKVKDGI---------VLH------PEDEELIQNVTDFIKNNI 1228 Query: 210 REEILRPEWIAGETGMSVRSLYRMFA---DKGLVVAQYIRNRRLDFCADAIRHAADDEKL 266 +E+L P IA G+S +LYR F DK ++++R RL++ A +R + Sbjct: 1229 DDELLSPSSIAEFVGVSKATLYRKFKEIIDK--TPSEFVRGIRLEYAAKLLR--TTKLTV 1284 Query: 267 AGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRK 299 + I F GFS++S+F F +++G++P +YR + Sbjct: 1285 SEIMFKCGFSNKSYFYREFLKQYGVSPKDYRNQ 1317 >UniRef50_C6WAU0 Transcriptional regulator, AraC family n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6WAU0_ACTMD Length = 305 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 71/295 (24%), Positives = 121/295 (41%), Gaps = 21/295 (7%) Query: 12 WLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWF 71 W +++ G F+G T R + + G +GV R ++V D F Sbjct: 26 WAARVADAAG-FSGAASTRRVDDLTVVDWESG------AFAGV---RGPRQVAAGDGDHF 75 Query: 72 YTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFP 131 SG + Q R+ + AGD ++ P S+L+PR +LE Sbjct: 76 VARIVRSGSEVFAQGGREWVLRAGDAVAWESRSPARFAAAGPVATRSVLIPRDVLEDV-- 133 Query: 132 HQKPICAERL-DADLPMVQLSHRLLQESMNN--PALSETESEAALQAMVCLLRPVLHQRE 188 P+ R +P V+L L ES+ P L+ + AA A++ L L Sbjct: 134 -GCPLVIGRPRPGRVPAVRLLAGYL-ESLAPLLPDLAPGPAVAARNALLELGWGALQPES 191 Query: 189 SVQPRRERQFQKVVT--LIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIR 246 + P+ ++ +D + L + +A G+SVR+L R+F+ G + +R Sbjct: 192 PLDPQALAPARRAAVERYLDARLGRSDLGVDEVAAAHGVSVRTLGRLFSAGGETFSGVLR 251 Query: 247 NRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKFR 301 +R+ + + D +A + WGF D SH + F+ G++P EYR + R Sbjct: 252 AKRVARVREEL--LTGDSTVAALARRWGFFDTSHLNRRFRAVHGVSPHEYRARHR 304 >UniRef50_B4EG24 AraC family regulatory protein n=12 Tax=Burkholderia RepID=B4EG24_BURCJ Length = 326 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 61/236 (25%), Positives = 101/236 (42%), Gaps = 32/236 (13%) Query: 77 LSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPI 136 LSG+A Q +R + AGD+ + D P + +Q+ + +P T L+ Sbjct: 92 LSGRAYFIQRDRCLLAEAGDVVVYDTRVPYLFGFLTPMRQLLIDIPITTLD--------- 142 Query: 137 CAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLL-----RPVLHQRESVQ 191 +RLDA+L + L R+ + L T + + M + R H R + Sbjct: 143 --DRLDAELAALPL--RIAPKPGAGAMLGATLRASVERFMKAPVERDAARFAEHTRTLIA 198 Query: 192 PRRERQFQKVVT-------------LIDDNIREEILRPEWIAGETGMSVRSLYRMFADKG 238 + + V I ++ E L P+ +A G+S+R L R+FA +G Sbjct: 199 ALVDAEVNGVGASRASLSYLLTAKQYIATHLGEPELGPQAVADAVGLSLRHLGRLFAAEG 258 Query: 239 LVVAQYIRNRRLDFCADAIRHAADDEKLAG-IGFHWGFSDQSHFSTVFKQRFGMTP 293 + Q+I + RL + A + G I F WGFS Q+HFS ++R+G +P Sbjct: 259 ESITQHIWSERLSHAHRELTDARLRKTSIGEIAFRWGFSSQAHFSRAIRERYGASP 314 >UniRef50_D1PBG8 Two-component system sensor histidine kinase/response regulator n=1 Tax=Prevotella copri DSM 18205 RepID=D1PBG8_9BACT Length = 1333 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 44/158 (27%), Positives = 73/158 (46%), Gaps = 27/158 (17%) Query: 153 RLLQESMNNPALSETESEAALQAMVCLLRPVLHQRESVQPRRERQFQ----------KVV 202 R+L + PAL++ E+ A + E+V P E F +V Sbjct: 1189 RILPAAAPQPALNQAETSA--------------ENEAVDPNSELAFMAAQIQDRTMLRVF 1234 Query: 203 TLIDDNIREEILRPEWIAGETGMSVRSLY-RMFADKGLVVAQYIRNRRLDFCADAIRHAA 261 + +N L+ + I+ E GMS LY ++ A G+ ++R+ R+ + +R+ Sbjct: 1235 RFVVENAGNPELKIDDISNEIGMSRSVLYNKVKATTGMTPVDFVRHIRIKKACEILRNT- 1293 Query: 262 DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRK 299 D+ L I F GF+D +FS VFK+ G+ P EYR + Sbjct: 1294 -DDTLTSIAFAVGFTDPKYFSKVFKKETGIVPTEYRNR 1330 >UniRef50_Q6LQ97 Hypothetical transcription regulator n=4 Tax=Photobacterium RepID=Q6LQ97_PHOPR Length = 233 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 38/108 (35%), Positives = 57/108 (52%), Gaps = 4/108 (3%) Query: 193 RRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFAD-KGLVVAQYIRNRRLD 251 +RE + + +ID NI LR E +A S R+F + G+ + QYI +RLD Sbjct: 124 QRELSIKPALIIIDQNISAP-LREEDLANACQYSPTYFSRLFHNVMGVTLKQYIIKKRLD 182 Query: 252 FCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRK 299 + +D EK++ + GF D S+FS VFK+ G +PGE+R K Sbjct: 183 LACGLL--ISDREKISSVATSAGFKDVSYFSRVFKKHIGCSPGEFRLK 228 >UniRef50_Q38ZV0 Transcriptional regulator, AraC family n=3 Tax=Burkholderia cepacia complex RepID=Q38ZV0_BURS3 Length = 368 Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 61/269 (22%), Positives = 112/269 (41%), Gaps = 26/269 (9%) Query: 45 KLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASR 104 +++ ++ S + S K + ++QLSG A +EQ +V + G TL +AS Sbjct: 96 RVARISASAHSASIGRDACKTLKHRYVKVIWQLSGVARLEQGACEVIVPPGHFTLYEASS 155 Query: 105 PCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERL----------DADLPMVQLSHRL 154 P YW +S + T+L + H + R A + + L + Sbjct: 156 P---YWIQSDAHGEFV---TMLCEVADHDALLALARHAIGRAMPTTGGAAVALASLQAMI 209 Query: 155 LQESMNNPALSETESEAALQAMVCLLRPVLHQRESVQPRRERQFQKVVT-----LIDDNI 209 + NP L+ + LL + + P R+ ++ + I ++ Sbjct: 210 AEGRRMNP----RSRFGVLELVATLLAETIDFTDGTAPASRRKIRETLLRDAQQYIHRHL 265 Query: 210 REEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRH-AADDEKLAG 268 + L P+ IA + R+LY+ F G I+ RL+ C + + AD + Sbjct: 266 DDGELSPDRIAAALKVCRRTLYQAFESIGERPQAMIQRLRLEKCHEVLSQTGADGASITR 325 Query: 269 IGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 + GFSD ++F+ +F++RFG+TP + R Sbjct: 326 LALQSGFSDPAYFARLFRRRFGVTPSQCR 354 >UniRef50_B7KY13 Transcriptional regulator, AraC family n=4 Tax=Methylobacterium extorquens group RepID=B7KY13_METC4 Length = 331 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 65/233 (27%), Positives = 98/233 (42%), Gaps = 14/233 (6%) Query: 77 LSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPI 136 L G A ++ + GD T+ D S+ E + I+LL+PR L++ P+ Sbjct: 85 LDGTACVDAGGGDRAVKPGDFTIFDLSQVMRSDTGEIAS-INLLMPRRSLDRRLGDLSPL 143 Query: 137 CAERLDADL-PMVQLSHRLLQESMNNPALSETESEAALQ-AMVCLLRPVLHQRESVQPRR 194 DL P+ QL L+ ++ +L A V L +L P Sbjct: 144 HGRVFRQDLTPLTQLMGDHLRSLATCVEAADAWQRDSLSIATVALCNAMLTPEGGDTPYT 203 Query: 195 ERQFQKVVT--LIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDF 252 + ID ++ L + + G+S +LY +F G VA YIRNRRL Sbjct: 204 PDTMLGIAIRQFIDGDLTAYDLDADKLTARFGISRTNLYALFEPDG-GVASYIRNRRL-- 260 Query: 253 CADAIRHAADDEK-----LAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKF 300 A A+R A E+ +A IG+ GF + FS FK+R+G+ P E F Sbjct: 261 -ARAMRILAGIERGPRQRIASIGYACGFETEKSFSRAFKRRYGVNPSEVDASF 312 >UniRef50_B0MKI2 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MKI2_9FIRM Length = 284 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 43/135 (31%), Positives = 71/135 (52%), Gaps = 13/135 (9%) Query: 176 MVCLLRPVLHQRESVQP--------RRERQFQKVVTLIDDNIREEILRPEWIAGETGMSV 227 ++C+L ++ ++E Q ++ R+F+ V++ I+ N R+ I E +A E GM+ Sbjct: 153 LLCMLGHIVARQEHYQSGETAASDIKKVRRFKNVISYIEQNYRKNITLEE-LANECGMNR 211 Query: 228 RSLYRMFAD-KGLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFK 286 R F + G +Y+ R++ + I A+ DEKL I GF+D S+F VFK Sbjct: 212 NYFCRAFKEYTGKTPVEYLNYFRIESACELI--ASTDEKLIDIAMKCGFNDYSYFIKVFK 269 Query: 287 QRFGMTPGEY-RRKF 300 G+TP +Y RR F Sbjct: 270 SMKGVTPRDYCRRSF 284 >UniRef50_C7GBP3 DNA-bindng response regulator, AraC family n=2 Tax=Roseburia RepID=C7GBP3_9FIRM Length = 534 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 36/107 (33%), Positives = 60/107 (56%), Gaps = 14/107 (13%) Query: 200 KVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFA-DKGLVVAQYIRNRRLD-----FC 253 ++ T ID + REEI R E +A ++ + RMF +KG+ ++ YI +R+D C Sbjct: 430 QICTYIDSHFREEIHRDE-LAELVYLNTDYMSRMFKKEKGVSISNYILQKRVDEAKKLLC 488 Query: 254 ADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKF 300 ++ + + H G+S+ S+F+ +FK+ G+TP EYRRKF Sbjct: 489 GSSL-------PINTVSLHIGYSNFSYFTKMFKENTGLTPLEYRRKF 528 >UniRef50_B1ZL19 Transcriptional regulator, AraC family n=6 Tax=Alphaproteobacteria RepID=B1ZL19_METPB Length = 351 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 60/222 (27%), Positives = 98/222 (44%), Gaps = 28/222 (12%) Query: 95 GDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQK-------PICAERLDADLPM 147 GDI L D +RP ++++ +++ L R L+E P P L DL M Sbjct: 115 GDIILFDLTRPQRTRL-DAARTVTVSLARELVEAAAPDAGRYHGQILPEAVSGLLGDL-M 172 Query: 148 VQLSHRLLQESMNNPALSETESEAALQAMVCLLRPVLHQRESVQPRRERQFQKVVTL--- 204 L+ R + + + +A+ LL L Q ++P E + L Sbjct: 173 GSLARRAAAATPET-------AASTARALTELLAGALGQ---IKPDDEAAGALIADLRRR 222 Query: 205 -----IDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRH 259 I+ + + L +A +S +LYR+F G VAQ+I RRL+ + A+R+ Sbjct: 223 RAEAFIEARLHDPGLDVMTVARGAALSRSALYRLFEPTG-GVAQHILARRLERLSAALRN 281 Query: 260 AADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKFR 301 A+ + + F GF+ +SH S F+ FG+ PG YR + R Sbjct: 282 PAEGRSITTLTFDHGFASESHCSRAFRGTFGLPPGRYRAEMR 323 >UniRef50_Q0FRN2 Transcriptional regulator, AraC family protein n=1 Tax=Roseovarius sp. HTCC2601 RepID=Q0FRN2_9RHOB Length = 288 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 60/216 (27%), Positives = 89/216 (41%), Gaps = 11/216 (5%) Query: 91 QIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQL 150 ++G G LL + R L Q Q + LP LE R M L Sbjct: 65 EVGPGGYVLLRSDRFYELRAQGDLSQWRVRLPAAALEDRLVAVDTHVGARFAPHPQMAAL 124 Query: 151 SHRLLQESMN----NPALSETESEAALQAMVCLLRPVLHQRESVQPR--RERQFQKVVTL 204 R L ++ +PA L A++ L+ ++E R R R Q++V Sbjct: 125 VARTLSATLQVFRQSPAPRPEALAGELVALIALMIGSEGEQEGNLGRTGRNRTRQRIVAH 184 Query: 205 IDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAADDE 264 I+ ++ + L PE IA G+S LY +FA+ VA +IR RRL + + AD Sbjct: 185 IERHLGDPGLAPEGIARAMGVSRSYLYALFAEGNETVAGFIRTRRLQAAYEML--LADSR 242 Query: 265 ---KLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 ++ + + GF SHFS F + F TP R Sbjct: 243 GGLAISEVAYRTGFKSVSHFSRSFSRHFQATPRSVR 278 >UniRef50_Q0S048 Probable transcriptional regulator n=1 Tax=Rhodococcus jostii RHA1 RepID=Q0S048_RHOSR Length = 285 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 58/249 (23%), Positives = 102/249 (40%), Gaps = 18/249 (7%) Query: 5 VDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVK 64 V N F L + G FTG LLT GV+ + L++S V+ V + R ++ Sbjct: 23 VSNAFVP-LDAKSYTAGTFTGELLT----GVVGS-----LQVSEVSGGAVEVCRMPDAIR 72 Query: 65 GSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRT 124 SD + Q+ G ++ QD+R+ + GD ++ D RP + ++ Q+ ++ P Sbjct: 73 RSDPGYVKLGMQIRGYCVLTQDDREAALIPGDFSIYDTRRPYQVSFEGDFAQLVVMFPHE 132 Query: 125 LLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNP------ALSETESEAALQAMVC 178 L+ + A R+ + L +LL P + ++ S L + Sbjct: 133 LIHLPPDALNDMTARRVSGRRGIGGLVSKLLVGIAEQPRGVEELSANQQLSNGVLNLLAA 192 Query: 179 LLRPVLHQRESVQPRRERQ--FQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFAD 236 L L +V P R ++ ID + + L IA +S R+L +MF Sbjct: 193 ALSEQLGCESNVPPETNRAALLLQIKAFIDARLYDPELSSHLIARAHNISPRNLQKMFEG 252 Query: 237 KGLVVAQYI 245 +G ++I Sbjct: 253 EGTTATEWI 261 >UniRef50_D1T9I8 AraC family transcriptional regulator n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1T9I8_9BURK Length = 280 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 60/231 (25%), Positives = 99/231 (42%), Gaps = 12/231 (5%) Query: 72 YTVFQLSGQAIMEQDERQVQIGAGDITLLDASRP-CSLYWQESSKQISLLLPRTLLEQYF 130 + F L G R+ + G +TL A P + ++ K + + + LE+ Sbjct: 45 FFCFVLDGCGTRSWPSRRGEDGPMSLTLFPAGVPHANCWYGAGGKALHVEFSSSWLERLG 104 Query: 131 PHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPVLHQRESV 190 + + A + RL++E + + E + ++ + +V Sbjct: 105 GRTQVLDRPGDFASGAPLSFMRRLVRECREQDSATSLAVEGLVLELLAACERAAPRTATV 164 Query: 191 QPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADK-GLVVAQYIRNRR 249 R R +V L+ D R+ + E IA ++ + L R F G V +Y+R R Sbjct: 165 GGSR-RWLARVEALLHDRFRDALTLDE-IASDSHVCADHLAREFRKHYGCTVGEYVRQLR 222 Query: 250 LDF-CAD--AIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 LDF CA + RH+ L I GF+DQSHF+ VF++R G+TPG YR Sbjct: 223 LDFACAQLTSGRHS-----LKAIAQDAGFADQSHFTRVFRRRMGLTPGAYR 268 >UniRef50_C6VSM8 Sensor protein n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VSM8_DYAFD Length = 1366 Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 38/98 (38%), Positives = 53/98 (54%), Gaps = 3/98 (3%) Query: 200 KVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMF-ADKGLVVAQYIRNRRLDFCADAIR 258 K +++ N+ + + E +A E +S L R A GL +IR+ RL A+ IR Sbjct: 1262 KAKEIVEANMEDALFSVEKMAEEMSLSRTQLLRKLKALTGLAPNDFIRDLRLQKAAEMIR 1321 Query: 259 HAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEY 296 AD + IG+ GFSDQS+FS FK+ FG TP EY Sbjct: 1322 QKAD--TITQIGYAVGFSDQSYFSKSFKKEFGETPTEY 1357 >UniRef50_UPI0001B4CF93 AraC family transcription regulator n=1 Tax=Streptomyces hygroscopicus ATCC 53653 RepID=UPI0001B4CF93 Length = 367 Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 63/279 (22%), Positives = 109/279 (39%), Gaps = 23/279 (8%) Query: 43 GLKLSTVTTSGVNLSRTWQE-----VKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDI 97 G+ L V SG ++ W ++ SD ++ LSG+ + +GA Sbjct: 47 GVNLGQVMVSGTSVPSLWNHRTPVHIRRSDPELYHLQLHLSGETDVRHAGATTTLGARQF 106 Query: 98 TLLDASRPCSLY-WQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPM-VQLSHRLL 155 L S P + + + +++ +P +LL + RL + L+ L+ Sbjct: 107 MLSCTSGPYEAFVGRGRTDTMTVAVPPSLLPFPAADLGRLLGRRLSGRTGIGALLADVLV 166 Query: 156 QESMNNPALSETESEAALQAMVCLLRPVLHQ---------------RESVQPRRERQFQK 200 + + A + +V LL +L R + + R + Sbjct: 167 RLGAEHTAYRPADGPRLGTVVVDLLTALLAHELDGDAEAGAGTTAGRMAPESHRRALVLR 226 Query: 201 VVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCA-DAIRH 259 + N+ L P IA +SVR L+R+F +G VA +IR +RL+ C D Sbjct: 227 IQDFAQRNLHTPDLTPSSIAAAHHISVRYLHRLFERQGHTVAAWIRAQRLERCCRDLADP 286 Query: 260 AADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRR 298 A + I WGFS + FS F+ +G+ P ++RR Sbjct: 287 AQSGLPIHAIAARWGFSHAADFSRAFRGAYGIPPRDFRR 325 >UniRef50_C6Q9S8 Transcriptional regulator, AraC family n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6Q9S8_9RHIZ Length = 346 Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 55/229 (24%), Positives = 104/229 (45%), Gaps = 18/229 (7%) Query: 77 LSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSK--QISLLLPRTLLEQYFPHQK 134 +SG+ ++Q GD+ L ++ P +L + + ++ ++P + F H + Sbjct: 98 ISGELKVDQGGTTNIAKRGDLILYESFSPVTLTERPDAPCDNLAFIIPTS----SFAHSQ 153 Query: 135 PICAERLDADLPMVQLSHRL------LQESMNNPALSETESEAALQAMVCLLRPVLHQRE 188 I + + +P +LS L L +S+ + E A QA V LL + + Sbjct: 154 DIDHKFSNILVPSEKLSGPLAGCLTMLAQSLCTAPIEEIA--ALFQACVALLPVAIGAPD 211 Query: 189 SVQ-PRRERQF--QKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYI 245 VQ P + + +++ I N+ + L P +A + G+SVR L+++F G + ++ Sbjct: 212 CVQHPSVPKNYLLSRILDYIGQNLSDPELSPPRVADQFGISVRYLHKLFVQFGTTFSAHV 271 Query: 246 RNRRLDFCA-DAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTP 293 RL D + ++ + + WGF+D S F FK++FG TP Sbjct: 272 TAERLKRIKWDLEVSSGRRPSISALAYRWGFNDLSTFHRAFKKQFGCTP 320 >UniRef50_C8QGB6 Transcriptional regulator, AraC family n=2 Tax=Enterobacteriaceae RepID=C8QGB6_9ENTR Length = 327 Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 73/301 (24%), Positives = 131/301 (43%), Gaps = 15/301 (4%) Query: 9 FQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVK-GSD 67 F+ W I + C G+ L+ + G L + + T++ S R + ++ G + Sbjct: 23 FEYWNDVILRHCIPSDGKPLSGTFDGELGVREVGLVDICTLSASTHYWERKAKHLRTGPE 82 Query: 68 DAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLE 127 D + FQ G +EQ R+ + + ++ L DA++ + + + +PR LL Sbjct: 83 DDLWLGCFQ-GGYGQLEQGGRKANLTSTNLVLYDAAQTFRFSIGGYNNHL-IRIPRHLLC 140 Query: 128 QYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPVLHQR 187 P + + A LD P + ++ +++ +P L + + A + LL ++ Sbjct: 141 GKLPGAESMTATVLDESRPGIIPLREMIYQAVQSPELF-SHPQLAGRFSQTLLDLLVLSL 199 Query: 188 ESVQPRRERQFQKVVTLIDDNIREEILRP----EWIAGETGMSVRSLYRMFADKGLVVAQ 243 E P +E + + I + IR + P E IA +SVR++ R FA Sbjct: 200 ELQTPEKEHVERDLYARIRNYIRRHLTDPALNLESIALAHHVSVRTVTRAFARHQKTPVA 259 Query: 244 YIRNRRLDFCADAIRHAADDEKLAGI---GFHWGFSDQSHFSTVFKQRFGMTPGEYRRKF 300 I RL+ A R A ++A + +GFSD SHFS F++ FG+TP ++ Sbjct: 260 IIWQERLE----ASREALVQGRVASVSQAAMDYGFSDFSHFSHAFRKAFGVTPHSVMKQH 315 Query: 301 R 301 R Sbjct: 316 R 316 >UniRef50_C8Q6A0 Transcriptional regulator, AraC family n=1 Tax=Pantoea sp. At-9b RepID=C8Q6A0_9ENTR Length = 314 Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 60/275 (21%), Positives = 110/275 (40%), Gaps = 6/275 (2%) Query: 30 ERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQ 89 +RY GV+ + L+LS V+ S N+ R + D F G+ + Q Sbjct: 37 DRY-GVIRSGNWGDLRLSEVSCSAQNVIRCRRGADNHPDNAMLLSFISQGKTSVIQAGSH 95 Query: 90 VQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQ 149 +G G+ L D P L+ ++Q + +P L + + + A + Sbjct: 96 ACLGQGEFGLYDTRFPYELHLHGETRQHVVQIPIEHLRKEMGKTEHLVAYSFGRKHSLTP 155 Query: 150 LSHRLLQESMNNPALSETESEAALQAMVCLLRPVLHQRESVQPRRERQ----FQKVVTLI 205 + LL M P + L L V+ E + R R +V +I Sbjct: 156 FLYVLLNNLMAQPEDIAYRHTSVLYRQFLELLTVIVSDECIAKRSSRSSAGLLLQVKIMI 215 Query: 206 DDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAA-DDE 264 D + + L +A +S R L + G +Y+ +RL+ + A++ + Sbjct: 216 DRQLSDTTLSVSSVAESFRISPRYLSMLLKGDGTTFGRYVLTQRLNKASLALQSPLYSNI 275 Query: 265 KLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRK 299 ++ I + GF+D ++FS F+++F +P EYR + Sbjct: 276 PISQIAWELGFNDMAYFSRAFRKKFSCSPTEYRHQ 310 >UniRef50_D0XXU2 Transcriptional regulator, AraC family n=1 Tax=Caulobacter segnis ATCC 21756 RepID=D0XXU2_9CAUL Length = 341 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 55/237 (23%), Positives = 105/237 (44%), Gaps = 8/237 (3%) Query: 69 AWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQ 128 A + L G+A + D+ V + GDI + +L S+ + + PR L+ Sbjct: 74 AAVWLAVLLHGEATLVTDDLAVGVSPGDIAFGPTGQAAALRLDTRSRLLFVRAPRVALDH 133 Query: 129 YFPHQKPICAERLDADLPMVQLSHRLLQ---ESMNNPALSETES-EAALQAMV--CLLRP 182 + L+ + ++ LL+ E + N ++ + + AL + CLL Sbjct: 134 RLIKPFNLRVGWLEGSEGVPRILSDLLRGTAEELENLSVDQLRPVDLALTEFLAQCLLER 193 Query: 183 VLHQRESVQPRRER-QFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVV 241 +++ P Q++ I+ + + L +A E G+S R + ++FA Sbjct: 194 GAAASDALDPSTPTAHLQRLCQTIETLLPDPDLSLRRVADEEGVSPRYVQKLFASANETF 253 Query: 242 AQYIRNRRLDFC-ADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 + Y+R+RRL+ C D ++ I F WGF+ +HFS F++++G +P E+R Sbjct: 254 SHYLRSRRLERCRIDLASPQHARLSISEICFRWGFNGSAHFSRAFREQYGRSPREFR 310 >UniRef50_UPI0001787EAC transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001787EAC Length = 447 Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 4/101 (3%) Query: 199 QKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMF-ADKGLVVAQYIRNRRLDFCADAI 257 Q+ + ++D++ E L E IAG MS+ +LYR+F + G V +YIR RR+ A + Sbjct: 8 QRAIDFVEDHLTEP-LALEEIAGVAAMSLPNLYRLFHSITGHPVKEYIRKRRISEAASCL 66 Query: 258 RHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRR 298 R+ D IG+ GF F FK+ G+TPG YR+ Sbjct: 67 RNT--DLPTIDIGYRCGFESYPAFMKTFKRCTGLTPGAYRK 105 >UniRef50_A4U4I6 Transcriptional regulator, AraC family n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U4I6_9PROT Length = 369 Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 54/195 (27%), Positives = 86/195 (44%), Gaps = 16/195 (8%) Query: 112 ESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN-----PALSE 166 E S + ++LPR L+ PH + + + + + LL++ M + P+ S Sbjct: 140 EDSDAVVMVLPRQLVLDEVPHLAGLRGQVFADN----SVCNHLLRDHMLSLRRLLPSASM 195 Query: 167 TESEAALQAMVCLLRPVL-HQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGM 225 A Q+++ LL ++ H + F + ID + + L E I + Sbjct: 196 DSIPALTQSLLGLLDALMGHGDTGAAQVQTAMFASICRHIDSQLNDSDLGVESICAKFRC 255 Query: 226 SVRSLYRMFADKGLVVAQYIRNRRLDFCADAI---RHAADDEKLAGIGFHWGFSDQSHFS 282 S +LYR+F G V +YI+ RRL C I RH + I +GF SHFS Sbjct: 256 SRATLYRLFKPHG-GVREYIQRRRLMACFKVITGSRHM--HRGIFDIALDFGFISPSHFS 312 Query: 283 TVFKQRFGMTPGEYR 297 +F+ FGM+P E R Sbjct: 313 HLFRSHFGMSPSEAR 327 >UniRef50_Q603U3 Transcriptional regulator, AraC family n=1 Tax=Methylococcus capsulatus RepID=Q603U3_METCA Length = 354 Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 60/221 (27%), Positives = 101/221 (45%), Gaps = 17/221 (7%) Query: 87 ERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDA-DL 145 ER + GD+ LLD ++P + ++L+LPR LL PH ERL L Sbjct: 107 ERHSTVQPGDVFLLDLTQPLD-SCASDFRNLTLMLPRDLLA---PHLG--APERLHGRSL 160 Query: 146 PMVQLSHRLLQESMNN-----PALSETESEAALQAMVCLLRPVLHQRESVQPRRERQ--- 197 P RLL + + LS E++ + +V L+ + R E Sbjct: 161 PRDSARGRLLSQHIATLWEVATTLSSDEAQCIARGLVHLIGAYFGAGRVEEDRPETGAVL 220 Query: 198 FQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFC-ADA 256 + V I +++ + L PE +A +S LY +F G + +YI+ +RL + Sbjct: 221 LETVRRHIGNHLGDPRLTPESLAAYFRVSRSYLYSLFQPLG-GITRYIQQQRLRRAFLEL 279 Query: 257 IRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 R A+ +++ I + G+ +++HFS F++ FGM+P E R Sbjct: 280 TRPASRPRRVSEIAYRVGYRNEAHFSRSFRRAFGMSPSEAR 320 >UniRef50_D0LBE5 Helix-turn-helix-domain containing protein AraC type n=1 Tax=Gordonia bronchialis DSM 43247 RepID=D0LBE5_GORB4 Length = 342 Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 51/226 (22%), Positives = 101/226 (44%), Gaps = 9/226 (3%) Query: 79 GQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQ--KPI 136 G+A + Q + G +DAS P ++ + +Q+ + +PR L P Sbjct: 108 GRASIVQQGHSGVLSDGSFGFVDASMPFTVAGETPFEQVVVRIPRATLAGRLPAAVVDDS 167 Query: 137 CAERLDADLPMVQLSHRLLQE-SMNNPALSETESEAALQAMVCLLRPVLHQRESVQPRRE 195 + + +++ RLL + +M++ L E A++ ++ + Q + + Sbjct: 168 LGRSISGTEGIGRVASRLLVDLAMHDDRLDEGSWAGVATAVLEVVSASVQQCSTHLSATQ 227 Query: 196 RQFQKVVTLIDDNIREEILRPEW----IAGETGMSVRSLYRMFADKGLVVAQYIRNRRLD 251 + ++ I + +I P+ + E GMSVR ++++F+ G ++ RRLD Sbjct: 228 QSHTDDLSAIQRVLLRDIADPDRTLADVGAELGMSVRYIHKLFSASGTTPRAWLYARRLD 287 Query: 252 FCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 + + + A + GF D SHFS F+++FG++PG YR Sbjct: 288 RARTLLLQS--EITCANLSEQLGFRDVSHFSRAFRKQFGISPGRYR 331 >UniRef50_D1WYT1 Transcriptional regulator, AraC family n=2 Tax=Streptomyces RepID=D1WYT1_9ACTO Length = 331 Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 67/270 (24%), Positives = 103/270 (38%), Gaps = 48/270 (17%) Query: 58 RTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQ--IGAGDITLLDASRPCSLYWQ-ESS 114 RT + ++ SD + L G M ++ +V+ + A D+ LD SRP ++ E Sbjct: 68 RTPRLIRQSDPGLLHMTLVLPGSGAMHVEQGRVRSAVEAHDLYFLDTSRPSGVWTDGEPI 127 Query: 115 KQISLLLPRTLLE--------------------------QYFPHQKPICAERLDADLPMV 148 + + +PR+LL Q+ H E AD V Sbjct: 128 VGVGVDIPRSLLPLPMDTCLDEVLGRRLSGRHGFGALLTQFVTHLVDRAEEYGPAD---V 184 Query: 149 QLSHRLLQESMNNPALSETESEAALQAMVCLLRPVLHQRESVQPRRERQFQKVVTLIDDN 208 HR+L + E + E AL + R + + I N Sbjct: 185 ARLHRVLLDLAAGALAGELDRETALPP---------------EARTGNLVLAIRSFIGSN 229 Query: 209 IREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFC-ADAIRHAADDEKLA 267 + L P +A +S R L+R+F +G VA IR+RRL+ D D + Sbjct: 230 FHDPGLTPGTVAAAHYISTRQLHRLFHREGTTVATLIRSRRLERARLDLADPRLVDTPVQ 289 Query: 268 GIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 I GF +HFS VF+ GM+P +YR Sbjct: 290 TIAARCGFGAPAHFSRVFRAAQGMSPRDYR 319 >UniRef50_B5JY44 Transcriptional regulator, AraC family, putative n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JY44_9GAMM Length = 337 Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 35/101 (34%), Positives = 57/101 (56%), Gaps = 2/101 (1%) Query: 200 KVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRH 259 +VV I+ I + + IAGE M+ R+L R ++G AQ + R F + +R Sbjct: 237 EVVQAIESKIGYAVFSMQDIAGELNMTQRTLQRRLKEEGTSYAQLRDSVRFRFAEEYLRD 296 Query: 260 AADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKF 300 ++ D +A I + GFS+ ++F FK+ GM+PGEYR++F Sbjct: 297 SSMD--MATIAANLGFSEPANFYAAFKRWQGMSPGEYRKRF 335 >UniRef50_A9C153 Transcriptional regulator, AraC family n=1 Tax=Delftia acidovorans SPH-1 RepID=A9C153_DELAS Length = 382 Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 62/233 (26%), Positives = 103/233 (44%), Gaps = 20/233 (8%) Query: 78 SGQAIMEQD-ERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFP----- 131 SG + + D ++Q+ AGD+ + D +R E S +SL++PR L + F Sbjct: 124 SGSFVGQHDGSSELQVNAGDVVVFDMAR-TQQTLAEHSHVLSLIVPRRLGDAAFGTHGAD 182 Query: 132 -HQKPICAERLDADLPMVQLSHRLLQESMNNPALSETES--EAALQAMVCLLRPVLHQRE 188 H + + + A L L L + AL + + A Q + LRP QR Sbjct: 183 LHGTVLASGSIFAGLLADHLD--ALHRRLPTIALLQADDVVHATTQMLAACLRPS--QRT 238 Query: 189 SVQPRRERQ---FQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYI 245 + R E Q +++ I N+ L PE + G+S LY +F G V+ +Y+ Sbjct: 239 LAEARNEVQAATLERIQRHIAQNLAAP-LTPEILCRRFGISRHRLYHLFEPLGGVM-RYV 296 Query: 246 RNRRLDFCADAIRHAADDE-KLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 + RRL + + ++A + GF+ ++HFS F+ FG TP + R Sbjct: 297 QQRRLQRAFHTLSNPTCRRLRIADVATRLGFASEAHFSRAFRAAFGHTPSDVR 349 >UniRef50_Q65Q30 HTH-type transcriptional activator rhaR n=1 Tax=Mannheimia succiniciproducens MBEL55E RepID=RHAR_MANSM Length = 276 Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 49/181 (27%), Positives = 93/181 (51%), Gaps = 11/181 (6%) Query: 125 LLEQYFPHQKPICAERLDADLPMVQLSHRLLQ---ESMNNPALSETESEAA-LQAMVCLL 180 +++ Y PH + R++ + +VQL + Q ES S SEA LQ ++ + Sbjct: 99 IMKDYIPHNNEKKSLRINQE-TLVQLQSLISQLEIESKKTNKSSMHLSEAIFLQILILIC 157 Query: 181 RPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADK-GL 239 R Q+E+ + + + + ++ +I +E ++ + ++V S+ R+F + + Sbjct: 158 RT--QQQENKAYSDISKLESLFSALNQSISQEFYLADF-CRQHQLAVSSVRRIFKQQTNM 214 Query: 240 VVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRK 299 +AQY++ RL A +R+ + E +A I G+SD ++FS+VF + F TP EYR + Sbjct: 215 TIAQYLQKLRLCRAATLLRNTS--ESVANIAIRCGYSDSNYFSSVFGKTFSCTPTEYRSR 272 Query: 300 F 300 F Sbjct: 273 F 273 >UniRef50_A5HV12 Probable transcriptional regulator n=1 Tax=Pseudomonas putida RepID=A5HV12_PSEPU Length = 311 Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 54/242 (22%), Positives = 105/242 (43%), Gaps = 14/242 (5%) Query: 59 TWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQIS 118 T +V GSD + + G ++ + R + + G TL+D+ L ++ + Sbjct: 69 TRSDVDGSDSVYIIQIRN--GGMEVKSNGRAIFLADGSCTLVDSRLNFRLSSNATTNGLI 126 Query: 119 LLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLL-------QESMNNPALSETESEA 171 + LP LE + + A+ + +D + LL E + N + S +E A Sbjct: 127 VRLPERWLESWLTNPDDYAAQEIKSDTGWGKSLCSLLLNLDPMDAEQLGNHSNSLSEHIA 186 Query: 172 ALQAMVCLLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLY 231 L ++ R H E + + ++++++++ + L PE I+ G+S R L+ Sbjct: 187 LLLSLS--KREASHLSEG---KNRSKIREILSMLETELSNINLSPELISERLGVSKRHLH 241 Query: 232 RMFADKGLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGM 291 FA G ++ + + RL + A + + I GF D SHFS F++++G+ Sbjct: 242 YQFAACGTTFSKELLDIRLKHAYKLLSDGATAKSVLEIAMTTGFCDSSHFSKKFREKYGV 301 Query: 292 TP 293 P Sbjct: 302 PP 303 >UniRef50_Q162N1 Transcriptional regulator, AraC family, putative n=4 Tax=Rhodobacteraceae RepID=Q162N1_ROSDO Length = 320 Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 58/280 (20%), Positives = 109/280 (38%), Gaps = 17/280 (6%) Query: 30 ERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQ 89 E + G ++T + LS + G+ R + D+ G Q+ RQ Sbjct: 36 ETFAGAMNTWNLGIVGLSHMRCDGILYKRHKRHFLDEVDSSLLITIPRLGNVGFNQNARQ 95 Query: 90 VQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQ 149 G+ + P + +++++ + L + + + A D + Sbjct: 96 ANCSPGEFLVERGDLPYEFWHEQTNELLVLKVSSESVRARIGPTDRLAALSFDGTAGVAS 155 Query: 150 LSHRLLQESMNN-PALSETESEAALQAMVCLLRPVLHQRESV-----QPRRERQFQKVVT 203 +++ + + L E AA + ++ LL + + + V R + Sbjct: 156 YFLDVVKTTAEHVDLLDEAARSAAGKHILDLLCLAIRKDDRVLDSNTSTIRAAHLHRAEQ 215 Query: 204 LIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRL-----DFCADAIR 258 I +N+ E L +A +S+R L ++F D ++ +IR +RL D C + Sbjct: 216 FIRNNLSNENLSSSLVAEACNVSLRYLQQLFLDADKSISGFIREKRLIRAREDLCVEGTI 275 Query: 259 HAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRR 298 +A I WGFSDQS F+ ++ +FG TP E RR Sbjct: 276 ------TIAEIAHRWGFSDQSQFNKAYRAQFGCTPTETRR 309 >UniRef50_D0IBI1 Putative ARAC-type regulatory protein n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0IBI1_VIBHO Length = 275 Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 54/220 (24%), Positives = 101/220 (45%), Gaps = 13/220 (5%) Query: 87 ERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKP----ICAERLD 142 E+++ + G++ + ++ W+ + K +S+L + + F H + + ++ Sbjct: 56 EKKLLLQQGEMVYIPSNAWSKPTWESTCKILSILFSKHQIGFSFVHHEVGNGFVDVQKYA 115 Query: 143 ADLPMVQLSHRLLQ--ESMNNPALSETESEAALQAMVCLLRPVLH--QRESVQPRRERQF 198 LP +L SM++ + S + A+V +L Q+E V RRE+ + Sbjct: 116 MPLPTSMAVEHVLDALNSMSDESRSMVMAGHLANALVTYCNELLQGPQQEKVS-RREKLY 174 Query: 199 QKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLV-VAQYIRNRRLDFCADAI 257 + + + +N + I R +A G+S + R+F +G V A Y+ RLD + Sbjct: 175 RSMCIYVQENFHKNITRTS-VASRFGVSSAHVSRLFNQEGSVRYADYVTYVRLDRAKFML 233 Query: 258 RHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 + + K+ I GF D ++F VFKQ+ G TP EYR Sbjct: 234 KKY--NFKVDEIAHRCGFKDTNYFCRVFKQKTGKTPSEYR 271 >UniRef50_A0KD53 Transcriptional regulator, AraC family n=9 Tax=Burkholderia cepacia complex RepID=A0KD53_BURCH Length = 350 Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 30/218 (13%) Query: 93 GAGDITLLDASR--PCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQL 150 GAGD+ + D ++ C + E+ ISL++PR LL H + L + + + + Sbjct: 110 GAGDLFVYDVAQINDCKV---EAGDVISLVVPRYLLPA---HAAQAHGQTLTSGVGRL-V 162 Query: 151 SHRLLQESMNNPALSETESEAALQAMVCLLRPVLHQ-----RESVQPRRERQFQKVVTLI 205 + ++L N P L + + +Q+M+ LL + ++ P +V I Sbjct: 163 ADQMLSLFRNLPNLRMQDVPSIVQSMLLLLAAAVSPSAQALNDARGPIDHALVDRVRRYI 222 Query: 206 DDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAAD--- 262 D ++ E L PE I + G+S LY++F ++G V+ Q R R +RHA Sbjct: 223 DLHLLEPDLTPERICRDIGVSRARLYQLFKEEGGVMRQITRRR--------LRHAYHVLG 274 Query: 263 -----DEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGE 295 +++A I + GF D+ +F +FK FG TP E Sbjct: 275 DPQRRHQRIAEIAWAHGFPDEKYFHRLFKAEFGHTPKE 312 >UniRef50_C0XNV4 Helix-turn-helix domain protein n=1 Tax=Corynebacterium lipophiloflavum DSM 44291 RepID=C0XNV4_9CORY Length = 146 Score = 60.5 bits (145), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 35/83 (42%), Positives = 46/83 (55%), Gaps = 4/83 (4%) Query: 217 EWIAGETGMSVRSLYRMFADK-GLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGF 275 EW AG +SVR+L+R+ A GL IR RRL A +R A + I G+ Sbjct: 62 EW-AGAAHVSVRTLHRLTAKHVGLTPLAIIRRRRLQDAAHELR--ATPAPVGAIAVRMGY 118 Query: 276 SDQSHFSTVFKQRFGMTPGEYRR 298 +DQSHF+ F+ FG TP +YRR Sbjct: 119 ADQSHFTREFRATFGTTPSDYRR 141 >UniRef50_B5CW93 Sensor protein n=1 Tax=Bacteroides plebeius DSM 17135 RepID=B5CW93_9BACE Length = 1430 Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 32/115 (27%), Positives = 62/115 (53%), Gaps = 4/115 (3%) Query: 187 RESVQPRRERQF-QKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFAD-KGLVVAQY 244 R+S++ ++++F + + +++NI L + + G+ LY M + G + + Sbjct: 1318 RKSIKSEKDKEFIESLNGFLENNISNPDLSVDMLCKHFGLGRTRLYAMVKEISGQSLGDF 1377 Query: 245 IRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRK 299 IR+ RL+ A ++H D + I + GF SHFS VFK +FG+TP ++ ++ Sbjct: 1378 IRDMRLNKAAYLLKHT--DMNITEIIYETGFGSNSHFSKVFKNKFGITPSDFAKQ 1430 >UniRef50_Q0SJU4 Transcriptional regulator, AraC family protein n=2 Tax=Rhodococcus jostii RHA1 RepID=Q0SJU4_RHOSR Length = 348 Score = 60.1 bits (144), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 66/277 (23%), Positives = 109/277 (39%), Gaps = 9/277 (3%) Query: 32 YTGVLDT-HFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQV 90 +TG + T HFA L + VT + + RT + ++G+ + QD R Sbjct: 74 FTGAVHTRHFAH-LMAADVTATSQSFRRTARLADRHPLDLMQIGMVVAGEGQLIQDGRTC 132 Query: 91 QIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQL 150 +G GD L + SRP + PR + + + A + + P+ QL Sbjct: 133 ILGPGDFALYETSRPFTWNLHPDWHLRVFTWPRASVSLTESQSQQLTARTVSSTSPVGQL 192 Query: 151 SHRLLQESMNNPALSETESEAALQAMVCLLRPVLHQRESVQPRRERQ-----FQKVVTLI 205 +L + + L + L + +E QP + +V I Sbjct: 193 LSPMLSRLLVADGEVSSGGAIGLAGGLADLA-ITAAQEECQPDDPDAAMRELYANMVQYI 251 Query: 206 DDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAAD-DE 264 ++ + L P IA +S R+++R+FA A IR RL+ C A+ + Sbjct: 252 GQHLDDPDLSPSGIAKAFFVSTRTVHRVFARFDATAAATIREHRLEACRQAMVSPRNIPR 311 Query: 265 KLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKFR 301 L I +GF D S FS F +G++P YR + R Sbjct: 312 SLTDIAAQFGFIDLSVFSRAFTATYGISPSRYREQHR 348 >UniRef50_Q3KZ34 Putative regulator AraC-type n=1 Tax=Pimelobacter simplex RepID=Q3KZ34_NOCSI Length = 396 Score = 60.1 bits (144), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 35/100 (35%), Positives = 53/100 (53%), Gaps = 5/100 (5%) Query: 205 IDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAADDE 264 IDD++ + L + G+S R + R+FAD G V + I RRLD A A+ + E Sbjct: 211 IDDHLTDPALSAVDVRAGAGISERQVSRIFADAGTSVPRQILARRLDL-AHALLASGTGE 269 Query: 265 KLAGIGFHWGFSDQSHFSTVFKQRFGMTPG----EYRRKF 300 + + GF+ S+FS F++RFG+TP E RR+ Sbjct: 270 RTVDVAARCGFASASYFSQAFRRRFGVTPARCVDEPRRRL 309 >UniRef50_B5HV97 AraC-family transcriptional regulator n=2 Tax=Streptomyces RepID=B5HV97_9ACTO Length = 338 Score = 60.1 bits (144), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 67/263 (25%), Positives = 112/263 (42%), Gaps = 31/263 (11%) Query: 58 RTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSL-----YWQE 112 R+ + V+ SD ++ L G+ +E R + G D+ L+++SRP L + Sbjct: 80 RSPEMVRRSDPELYHLSLLLDGELGLEHAGRNSRFGPHDLHLVESSRPYDLGPTDDRERR 139 Query: 113 SSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN---------PA 163 + K + + P+ LL PH+ E L LP + LL E + PA Sbjct: 140 AVKGVGVDFPKALLP-LPPHR---VHELLGQGLPGQEGVGALLAEFLVGLARQAETLQPA 195 Query: 164 LSETESEAALQAMVCLLRPVLHQRESVQP--RRERQFQKVVTLIDDNIREEILRPEWIAG 221 + L + ++ ++ P R++ ++++ I N+ + L P IA Sbjct: 196 DARRLGTVVLDLLAAWFAQLMDTEAALSPETRQKVTVERILAFIRQNLHDPELTPPVIAA 255 Query: 222 ETGMSVRSLYRMFADK--GLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFH-----WG 274 +S+ L+R+F + G VA +IR RRL+ R D L G H WG Sbjct: 256 AHHISLSYLHRIFQQRSQGETVAAWIRKRRLE----GARRDLADPSLHGTPIHAIAARWG 311 Query: 275 FSDQSHFSTVFKQRFGMTPGEYR 297 FS S F+ F+ G +P E+R Sbjct: 312 FSRASDFTRAFRAVHGQSPREFR 334 >UniRef50_Q1LFA2 Transcriptional regulator, AraC family n=1 Tax=Cupriavidus metallidurans CH34 RepID=Q1LFA2_RALME Length = 321 Score = 60.1 bits (144), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 5/115 (4%) Query: 185 HQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQY 244 H+ E+ +P ER ++ I E L +A + G+SVRSL+R+ A + Sbjct: 207 HKHETSKPLNER----ILDCIRSRCTESTLVAPQVAADLGISVRSLHRVLAAQNETFGFL 262 Query: 245 IRNRRLDFCADAIRHAADDE-KLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRR 298 + R+D + A + +A IG GF+D SHF+ VF++ G+TP RR Sbjct: 263 LMKARIDIAVRQLSSPAFNRLTVAAIGRRCGFTDDSHFTRVFRRHVGVTPLALRR 317 >UniRef50_C0FW59 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C0FW59_9FIRM Length = 292 Score = 60.1 bits (144), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 40/148 (27%), Positives = 78/148 (52%), Gaps = 7/148 (4%) Query: 153 RLLQESMNNPALSETESEAALQAMVCLLRPVLHQRESVQPRRERQ--FQKVVTLIDDNIR 210 +L++E + E + + +V L +++++++ + +E Q +Q ++ IDD++ Sbjct: 140 QLIEEIKSERFGKEAKVSLCVNDLVLQLNRIVYEQQNPKSEKEEQNLYQNIIYYIDDHLD 199 Query: 211 EEILRPEWIAGETGMSVRSLYRMFADK-GLVVAQYIRNRRLDFCADAIRHAADDEKLAGI 269 EE L E +AG+ +S + +F ++ GL V QYI +R+ AI + + + Sbjct: 200 EE-LSLEQLAGQFFVSKYHIAHIFKEQMGLSVHQYILKKRMQASKAAI---LGETSITDV 255 Query: 270 GFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 +GF D S F FK+ FG++P EY+ Sbjct: 256 YTMFGFKDYSSFYRAFKKEFGVSPKEYK 283 >UniRef50_B1FI04 Transcriptional regulator, AraC family n=1 Tax=Burkholderia ambifaria IOP40-10 RepID=B1FI04_9BURK Length = 341 Score = 60.1 bits (144), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 33/105 (31%), Positives = 54/105 (51%), Gaps = 1/105 (0%) Query: 198 FQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCAD-A 256 Q++ + I + ++ L P IA G+SVR L +FA V ++I RL+ C Sbjct: 219 LQRIKSHIVARLHDDTLTPSSIASAMGISVRRLNELFAQCQTTVTEWIIAERLERCRKRL 278 Query: 257 IRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKFR 301 + + E + + + GF + SHF+ FK RFG +PG+ R + R Sbjct: 279 LLRSQVRETICQVAYEEGFKNISHFNRAFKNRFGESPGQLRDRIR 323 >UniRef50_B1ZAE8 Transcriptional regulator, AraC family n=1 Tax=Methylobacterium populi BJ001 RepID=B1ZAE8_METPB Length = 335 Score = 60.1 bits (144), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 69/277 (24%), Positives = 119/277 (42%), Gaps = 9/277 (3%) Query: 24 TGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIM 83 +GRLL+ +D + L + V L RT + V F SG + + Sbjct: 36 SGRLLSGPIA--MDNYHLGDLLVGEVRAPAQILERTPRMVAQQGLDHLLLQFYHSGTSRV 93 Query: 84 EQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLD- 142 E + + A L D ++P ++ E +LLLPR L+ + P+ + + D Sbjct: 94 EVAWGETDVTANACILFDLAQPVTVV-AEPVHATNLLLPRALVAEKVPNVEALHGHAFDY 152 Query: 143 ADLPMVQLSHRLLQESMNNPALSETESEAAL-QAMVCLLRPVLHQRESVQPRRERQFQKV 201 A + +L ++E ++ + E + QA+ L L + + +P + Q Sbjct: 153 ASDRISRLFFTCVRELVDCVDVLEIHQLPHVSQAVAMLGSACLRGQAADRPSSDTQLSIT 212 Query: 202 V-TLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHA 260 + I+ + L E +A G+S +LYR F +G V ++IR RRL + Sbjct: 213 IRQYIEKELASPRLDAETLAEHFGLSRATLYRQFVAEG-GVQRFIRERRLLRAMKMLTQP 271 Query: 261 --ADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGE 295 A +++ + + GFSD+ FS FK+RFG P E Sbjct: 272 GPAGRPRVSAVAYATGFSDEKTFSRAFKRRFGFLPRE 308 >UniRef50_D0KWJ8 Transcriptional regulator, AraC family n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KWJ8_HALNC Length = 328 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 68/264 (25%), Positives = 108/264 (40%), Gaps = 15/264 (5%) Query: 44 LKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDAS 103 LK+ T S V + RT + + D + + + GDI L A Sbjct: 58 LKIGTFDGSAVKMVRTTKLAQDCADDLIICIERKTPTRATWGGAGARVFVPGDIHLWRAD 117 Query: 104 RPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAER-LDADLPMVQLSHRLLQESMNN- 161 + + + L +PRT+L + P+ E + + P +L R + Sbjct: 118 GTMQCETKGAFSALLLSIPRTVLSNHGIDIAPLLREGGICGNSPETRLLCRYTDSVLGEV 177 Query: 162 PALSETESEAALQAMVCLLRPVLHQRESVQPRRERQFQKV-VTLIDDNIREEILRPE--- 217 ALS L +V L VL R +V+ + + V + I +I +L PE Sbjct: 178 DALSPMGVSCCLSHLVDLAMLVLGGRNTVRLANRHRVRSVRLASIKSDIDAHLLNPELSV 237 Query: 218 -WIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAADDEK---LAGIGFHW 273 W+ +S R L +FAD+ +++ RRL HAA D+ ++ I + Sbjct: 238 GWVLRRHRISERYLRSLFADEDTSFTRFVLERRL-----MRAHAALDQSGRSISEIAYDC 292 Query: 274 GFSDQSHFSTVFKQRFGMTPGEYR 297 GFSD S F+ F+QRF MTP + R Sbjct: 293 GFSDLSWFNRAFRQRFDMTPSQAR 316 >UniRef50_B1HZR5 Transcriptional regulator (AraC/XylS family) n=1 Tax=Lysinibacillus sphaericus C3-41 RepID=B1HZR5_LYSSC Length = 294 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 33/101 (32%), Positives = 57/101 (56%), Gaps = 4/101 (3%) Query: 199 QKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFA-DKGLVVAQYIRNRRLDFCADAI 257 Q+++T I++ + EEI E++ TG S L R+F + GL + +YIR RRL A + Sbjct: 8 QRIITYIEEQLMEEI-ELEFMPSITGYSKFHLSRIFKQETGLTIGEYIRMRRLAVAASCL 66 Query: 258 RHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRR 298 ++ + + I F + F Q F+ FK+ + + PG+YR+ Sbjct: 67 IYS--NASIITIAFKFQFQSQEAFTRAFKEVYALPPGKYRK 105 >UniRef50_C3JEA3 Transcriptional regulator, AraC family n=2 Tax=Rhodococcus erythropolis RepID=C3JEA3_RHOER Length = 335 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 62/243 (25%), Positives = 99/243 (40%), Gaps = 9/243 (3%) Query: 64 KGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRP--CSLYWQESSKQISLLL 121 G DD + V L GQ D GD+T D R + + + I+LL Sbjct: 77 SGLDDEYMVQVV-LDGQLSGNADGVDFVARQGDVTFFDLGRTWTADAEAESTGRTITLLA 135 Query: 122 PRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLR 181 PR+L+E + + L +P V L+ + + P L + + LLR Sbjct: 136 PRSLVEAE-SKGRSLHGTVLRG-VPAVVLAQCMQSVVLALPHLDPDAAAGYEDVVASLLR 193 Query: 182 PVLHQRE-SVQPRRERQFQ-KVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGL 239 L E + PR + + + I +++ E L P + +S LYR FA G Sbjct: 194 VSLGIAEPDLSPRPDHSLRDRAYAYIAEHLSETWLGPTSMCAALSVSRAQLYRAFASDG- 252 Query: 240 VVAQYIRNRRLDFCA-DAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRR 298 +A IR +RL+ + R +E + + GF+ +S + FK +GMTP + R Sbjct: 253 GIALVIRRKRLELVYRELTRTEMPNETIEALALRCGFTSKSQLARAFKDFYGMTPSQART 312 Query: 299 KFR 301 R Sbjct: 313 DGR 315 >UniRef50_C3LC07 Transcriptional regulator, AraC family n=7 Tax=Bacillus RepID=C3LC07_BACAC Length = 296 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 39/107 (36%), Positives = 57/107 (53%), Gaps = 6/107 (5%) Query: 195 ERQFQKVVTLIDDNIRE-EILRPEWIAGETGMSVRSLYRMF-ADKGLVVAQYIRNRRLDF 252 E Q Q+ + I++++ E + LR +A G S +R+F A G V +Y+R RRL Sbjct: 5 ETQIQRSIDYIEEDVMEKQTLRN--LARIAGFSESHFHRVFQALVGDTVMEYVRKRRLAR 62 Query: 253 CADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRK 299 A + H DEK+ I F GF F+ FK+ F MTP EYR++ Sbjct: 63 AAYQLSHT--DEKIIDIAFEHGFQSHETFTRAFKKLFQMTPSEYRKQ 107 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q47129 Transcriptional activator feaR n=22 Tax=Enteroba... 401 e-110 UniRef50_C4X7N3 2-phenylethylamine catabolism regulatory protein... 321 3e-86 UniRef50_B0KNJ7 Transcriptional regulator, AraC family n=1 Tax=P... 280 5e-74 UniRef50_A8GAE8 Transcriptional regulator, AraC family n=1 Tax=S... 273 6e-72 UniRef50_C5CKL4 Transcriptional regulator, AraC family n=1 Tax=V... 246 7e-64 UniRef50_Q0SCS8 Transcriptional regulator, AraC family protein n... 244 3e-63 UniRef50_B8H6K6 Transcriptional regulator, AraC family n=2 Tax=A... 244 4e-63 UniRef50_B4E7T1 AraC family regulatory protein n=1 Tax=Burkholde... 243 6e-63 UniRef50_Q5YXZ9 Putative transcriptional regulator n=1 Tax=Nocar... 241 2e-62 UniRef50_B1KM98 Transcriptional regulator, AraC family n=2 Tax=G... 239 7e-62 UniRef50_A0K0Q9 Transcriptional regulator, AraC family n=2 Tax=A... 239 7e-62 UniRef50_Q0RX84 Transcriptional regulator, AraC family protein n... 239 8e-62 UniRef50_A5V4Y7 Transcriptional regulator, AraC family n=1 Tax=S... 238 2e-61 UniRef50_Q5YW11 Putative transcriptional regulator n=1 Tax=Nocar... 232 1e-59 UniRef50_A2SEG7 Transcriptional regulator, AraC family n=1 Tax=M... 229 1e-58 UniRef50_A2SM26 Transcriptional regulator, AraC family n=1 Tax=M... 227 4e-58 UniRef50_Q89GD7 Transcriptional regulatory protein n=1 Tax=Brady... 226 8e-58 UniRef50_Q500U0 Helix-turn-helix, AraC type n=2 Tax=Pseudomonas ... 226 8e-58 UniRef50_Q0S4H2 Probable transcriptional regulator, AraC family ... 226 9e-58 UniRef50_UPI0001873BA5 Helix-turn-helix, AraC type n=1 Tax=Pseud... 224 3e-57 UniRef50_B8GZF8 Transcriptional regulator, AraC family n=2 Tax=C... 224 4e-57 UniRef50_P72312 Nitrilase regulator n=1 Tax=Rhodococcus rhodochr... 224 4e-57 UniRef50_C0GAC0 AraC-family transcriptional regulator n=4 Tax=Br... 224 4e-57 UniRef50_A1VU02 Transcriptional regulator, AraC family n=4 Tax=C... 223 6e-57 UniRef50_B0RKH8 AraC family transcription regulator protein n=1 ... 222 9e-57 UniRef50_B1Z4N2 Transcriptional regulator, AraC family n=6 Tax=B... 222 9e-57 UniRef50_B1G4X3 Transcriptional regulator, AraC family n=1 Tax=B... 221 2e-56 UniRef50_A1R5Y4 Transcriptional regulator, AraC family n=1 Tax=A... 221 2e-56 UniRef50_Q28KV9 Transcriptional regulator, AraC family n=1 Tax=J... 220 6e-56 UniRef50_B9K5S9 AraC-type DNA-binding domain-containing protein ... 219 9e-56 UniRef50_Q4ZUB6 Helix-turn-helix, AraC type n=1 Tax=Pseudomonas ... 219 1e-55 UniRef50_B5S3I4 Probable transcription regulator sugar transport... 219 1e-55 UniRef50_B9K0H9 AraC-type DNA-binding domain-containing protein ... 217 3e-55 UniRef50_A5EP12 Transcriptional regulator, AraC family n=3 Tax=B... 217 4e-55 UniRef50_Q13VV6 Transcriptional regulator, AraC family n=2 Tax=P... 216 8e-55 UniRef50_B2HDE9 Transcriptional regulatory protein n=1 Tax=Mycob... 215 1e-54 UniRef50_B0KKU7 Transcriptional regulator, AraC family n=10 Tax=... 214 3e-54 UniRef50_B0V5B3 DNA-binding transcriptional dual regulator n=9 T... 214 4e-54 UniRef50_A5EKU9 Transcriptional regulator, AraC family n=2 Tax=B... 213 5e-54 UniRef50_B8ETQ3 Transcriptional regulator, AraC family n=1 Tax=M... 212 1e-53 UniRef50_B2IIE7 Transcriptional regulator, AraC family n=1 Tax=B... 212 1e-53 UniRef50_C4KLX3 AraC family regulatory protein n=30 Tax=pseudoma... 212 2e-53 UniRef50_C5ALA2 Transcriptional regulator, AraC family protein n... 211 2e-53 UniRef50_C1AVG9 Putative AraC family transcriptional regulator n... 210 4e-53 UniRef50_B9JQ03 AraC-type DNA-binding domain-containing protein ... 210 4e-53 UniRef50_A6W2J9 Helix-turn-helix-domain containing protein AraC ... 210 5e-53 UniRef50_B2IIZ5 Transcriptional regulator, AraC family n=1 Tax=B... 210 6e-53 UniRef50_C8Q6A0 Transcriptional regulator, AraC family n=1 Tax=P... 209 8e-53 UniRef50_Q1H4B9 Transcriptional regulator, AraC family n=1 Tax=M... 209 1e-52 UniRef50_A9D6L8 Helix-turn-helix, AraC type n=1 Tax=Hoeflea phot... 209 1e-52 UniRef50_A0NZA7 Probable transcriptional regulator n=1 Tax=Labre... 208 2e-52 UniRef50_D0XME9 Transcriptional regulator, AraC family n=1 Tax=B... 208 2e-52 UniRef50_C3PKW7 Transcription regulator, AraC family n=2 Tax=Cor... 208 2e-52 UniRef50_Q0SJU4 Transcriptional regulator, AraC family protein n... 208 2e-52 UniRef50_Q140Z5 Transcriptional regulator, AraC family n=2 Tax=B... 208 2e-52 UniRef50_A5W3Z7 Transcriptional regulator, AraC family n=5 Tax=P... 207 3e-52 UniRef50_C8QGB6 Transcriptional regulator, AraC family n=2 Tax=E... 207 3e-52 UniRef50_B4UYA5 AraC family regulatory protein n=1 Tax=Streptomy... 207 5e-52 UniRef50_A1RDF3 Transcriptional regulator, AraC family n=1 Tax=A... 207 5e-52 UniRef50_Q9S2C6 Putative regulatory protein n=3 Tax=Streptomyces... 207 5e-52 UniRef50_B1LSU0 Transcriptional regulator, AraC family n=1 Tax=M... 206 6e-52 UniRef50_B0T8Y9 Transcriptional regulator, AraC family n=1 Tax=C... 206 7e-52 UniRef50_C3KC85 Putative AraC family regulatory protein n=1 Tax=... 205 1e-51 UniRef50_C8Q8U1 Transcriptional regulator, AraC family n=1 Tax=P... 205 2e-51 UniRef50_UPI000050F7EC transcriptional regulator, AraC family pr... 205 2e-51 UniRef50_C6QDE9 Transcriptional regulator, AraC family n=1 Tax=H... 204 5e-51 UniRef50_C9NAR3 Transcriptional regulator, AraC family n=3 Tax=S... 203 5e-51 UniRef50_C6X6W8 Transcriptional regulator, AraC family n=1 Tax=M... 203 5e-51 UniRef50_B1Q2A8 Transcriptional activator for nphA1A2 n=4 Tax=No... 203 6e-51 UniRef50_C3JZK1 AraC family regulatory protein n=1 Tax=Pseudomon... 203 8e-51 UniRef50_C5CWJ0 Transcriptional regulator, AraC family n=1 Tax=V... 202 9e-51 UniRef50_Q5YUM1 Putative transcriptional regulator n=1 Tax=Nocar... 202 1e-50 UniRef50_B2JSH9 Transcriptional regulator, AraC family n=1 Tax=B... 202 1e-50 UniRef50_Q603U3 Transcriptional regulator, AraC family n=1 Tax=M... 201 2e-50 UniRef50_D1S730 Transcriptional regulator, AraC family (Fragment... 201 2e-50 UniRef50_A1VJU8 Transcriptional regulator, AraC family n=1 Tax=P... 201 3e-50 UniRef50_B8HJE0 Transcriptional regulator, AraC family n=1 Tax=A... 200 4e-50 UniRef50_A5VPA4 Transcriptional regulator, AraC family n=41 Tax=... 200 5e-50 UniRef50_B2GIQ7 Putative AraC family transcriptional regulator n... 200 5e-50 UniRef50_Q162N1 Transcriptional regulator, AraC family, putative... 200 7e-50 UniRef50_A1WI21 Transcriptional regulator, AraC family n=1 Tax=V... 199 8e-50 UniRef50_C5AL79 Putative uncharacterized protein n=1 Tax=Burkhol... 199 9e-50 UniRef50_B1GXZ7 Transcriptional regulator AraC family n=4 Tax=Rh... 199 1e-49 UniRef50_B2UHP4 Transcriptional regulator, AraC family n=2 Tax=R... 199 1e-49 UniRef50_Q2KTV5 AraC-family transcriptional regulator n=1 Tax=Bo... 199 1e-49 UniRef50_A3KKG5 Putative transcriptional regulator n=1 Tax=Strep... 199 1e-49 UniRef50_B6R2R9 Transcriptional regulator, AraC family n=1 Tax=P... 198 2e-49 UniRef50_A9E8K4 TRANSCRIPTIONAL REGULATOR, ARAC FAMILY n=1 Tax=O... 198 2e-49 UniRef50_D2AT05 AraC family transcriptional regulator n=1 Tax=St... 198 2e-49 UniRef50_C0ATQ8 Putative uncharacterized protein n=1 Tax=Proteus... 198 2e-49 UniRef50_A2SKZ3 Transcriptional regulator, AraC family n=1 Tax=M... 198 2e-49 UniRef50_A2SJ73 Transcriptional regulator, AraC family n=1 Tax=M... 198 3e-49 UniRef50_UPI0001AF1428 AraC family transcription regulator n=1 T... 198 3e-49 UniRef50_Q7CU51 Transcriptional regulator, AraC family n=1 Tax=A... 197 3e-49 UniRef50_UPI0001B554AB AraC family transcription regulator n=1 T... 197 4e-49 UniRef50_D0LBE5 Helix-turn-helix-domain containing protein AraC ... 197 5e-49 UniRef50_C0N2M9 Transcriptional regulator, AraC family protein n... 196 6e-49 UniRef50_UPI0001B4CF93 AraC family transcription regulator n=1 T... 196 1e-48 UniRef50_D0LBD5 Helix-turn-helix-domain containing protein AraC ... 195 1e-48 UniRef50_B9BG93 Transcriptional activator FeaR n=1 Tax=Burkholde... 195 1e-48 UniRef50_A6W014 Helix-turn-helix-domain containing protein AraC ... 195 2e-48 UniRef50_UPI0001B588BC AraC family transcriptional regulator n=2... 195 2e-48 UniRef50_Q0SCE6 Transcriptional regulator, AraC family protein n... 195 2e-48 UniRef50_A4Q9T5 Putative uncharacterized protein n=1 Tax=Coryneb... 194 2e-48 UniRef50_B2SCD0 Helix-turn-helix, AraC type n=39 Tax=Rhizobiales... 194 3e-48 UniRef50_Q0S048 Probable transcriptional regulator n=1 Tax=Rhodo... 194 3e-48 UniRef50_A6X8D5 Helix-turn-helix-domain containing protein AraC ... 194 4e-48 UniRef50_C5D1Y8 Transcriptional regulator, AraC family n=1 Tax=V... 194 4e-48 UniRef50_Q38ZW3 Transcriptional regulator, AraC family n=2 Tax=B... 194 5e-48 UniRef50_Q0S9V9 Transcriptional regulator, AraC family protein n... 193 8e-48 UniRef50_B1LTK5 Transcriptional regulator, AraC family n=2 Tax=M... 192 9e-48 UniRef50_A1BAD0 Transcriptional regulator, AraC family n=1 Tax=P... 192 1e-47 UniRef50_C6Q9S8 Transcriptional regulator, AraC family n=1 Tax=H... 192 1e-47 UniRef50_Q2G766 Transcriptional regulator, AraC family n=1 Tax=N... 192 1e-47 UniRef50_B0SW51 Transcriptional regulator, AraC family n=1 Tax=C... 192 1e-47 UniRef50_UPI0001B58708 AraC family transcription regulator n=1 T... 192 2e-47 UniRef50_A8ICM9 Putative transcriptional regulator n=1 Tax=Azorh... 192 2e-47 UniRef50_Q82RS6 Putative regulatory protein n=1 Tax=Streptomyces... 192 2e-47 UniRef50_A9BNP3 Transcriptional regulator, AraC family n=3 Tax=C... 192 2e-47 UniRef50_B5HV97 AraC-family transcriptional regulator n=2 Tax=St... 191 2e-47 UniRef50_C9NEM0 Transcriptional regulator, AraC family n=1 Tax=S... 190 4e-47 UniRef50_C8NQI1 AraC-type transcriptional regulator n=4 Tax=Cory... 190 4e-47 UniRef50_B8IWN2 Transcriptional regulator, AraC family n=1 Tax=M... 190 5e-47 UniRef50_B5GUE4 AraC family regulatory protein n=1 Tax=Streptomy... 189 8e-47 UniRef50_B5GMZ9 AraC-family transcriptional regulator n=1 Tax=St... 189 8e-47 UniRef50_A9D8L4 Transcriptional regulator, AraC family protein n... 189 9e-47 UniRef50_Q28K70 Transcriptional regulator, AraC family n=1 Tax=J... 188 1e-46 UniRef50_A8L0T7 Transcriptional regulator, AraC family n=3 Tax=A... 188 1e-46 UniRef50_D0J2C8 Transcriptional regulator, AraC family n=2 Tax=C... 188 2e-46 UniRef50_A1K9Y0 Putative AraC-like transcriptional regulator n=1... 188 2e-46 UniRef50_UPI0001B557E7 AraC family transcription regulator n=1 T... 187 3e-46 UniRef50_B1M073 Transcriptional regulator, AraC family n=3 Tax=M... 187 4e-46 UniRef50_A5EQH2 Transcriptional regulator, AraC family n=3 Tax=B... 187 4e-46 UniRef50_D2B571 AraC-type DNA-binding domain-containing protein-... 187 5e-46 UniRef50_Q82PX9 Putative AraC-family transcriptional regulator n... 187 5e-46 UniRef50_A5EI80 Transcriptional regulator, AraC family n=2 Tax=B... 185 1e-45 UniRef50_C0RK84 Helix-turn-helix-domain containing protein AraC ... 185 2e-45 UniRef50_Q2IYF7 Transcriptional regulator, AraC family n=1 Tax=R... 185 2e-45 UniRef50_D0IZV7 Transcriptional regulator, AraC family n=1 Tax=C... 185 2e-45 UniRef50_B7WVN7 Transcriptional regulator, AraC family n=1 Tax=C... 185 2e-45 UniRef50_A5EN17 Transcriptional regulator, AraC family n=2 Tax=B... 185 2e-45 UniRef50_C3JNQ1 Putative transcriptional regulator n=1 Tax=Rhodo... 185 2e-45 UniRef50_A3XDY1 Transcriptional regulator, AraC family protein n... 184 2e-45 UniRef50_C8STG1 Transcriptional regulator, AraC family n=1 Tax=M... 184 3e-45 UniRef50_C3VA09 Putative transcriptional regulator n=1 Tax=Pseud... 184 3e-45 UniRef50_C7Q9A2 Transcriptional regulator, AraC family n=1 Tax=C... 184 3e-45 UniRef50_C5CTZ5 Transcriptional regulator, AraC family n=1 Tax=V... 184 4e-45 UniRef50_C9PGF5 Transcriptional regulator AraC family n=1 Tax=Vi... 183 7e-45 UniRef50_A3VDL3 Helix-turn-helix, AraC type n=1 Tax=Rhodobactera... 183 8e-45 UniRef50_UPI0001B551BF AraC family transcriptional regulator n=1... 182 2e-44 UniRef50_B5GLL9 AraC family regulatory protein n=2 Tax=Streptomy... 182 2e-44 UniRef50_B4EG24 AraC family regulatory protein n=12 Tax=Burkhold... 182 2e-44 UniRef50_C4WP68 Helix-turn-helix domain-containing protein n=2 T... 181 3e-44 UniRef50_B1ZAE8 Transcriptional regulator, AraC family n=1 Tax=M... 180 4e-44 UniRef50_B6YYX2 Transcriptional regulator, AraC family n=1 Tax=P... 180 4e-44 UniRef50_C9Z7X5 Putative regulatory protein n=1 Tax=Streptomyces... 180 5e-44 UniRef50_A1TIH4 Transcriptional regulator, AraC family n=2 Tax=A... 180 6e-44 UniRef50_Q38ZV0 Transcriptional regulator, AraC family n=3 Tax=B... 180 6e-44 UniRef50_B1LSW4 Transcriptional regulator, AraC family n=2 Tax=A... 180 6e-44 UniRef50_C3JMU3 Transcriptional regulator, AraC family n=2 Tax=R... 180 6e-44 UniRef50_A9C153 Transcriptional regulator, AraC family n=1 Tax=D... 180 7e-44 UniRef50_Q0B5M9 Transcriptional regulator, AraC family n=4 Tax=B... 180 7e-44 UniRef50_B6A2N3 Transcriptional regulator, AraC family n=1 Tax=R... 179 8e-44 UniRef50_D1TAE4 AraC family transcriptional regulator n=1 Tax=Bu... 179 9e-44 UniRef50_Q8VUZ3 Cad gene transcriptional regulator n=2 Tax=Alpha... 179 1e-43 UniRef50_Q92PG5 Transcription regulator AraC family n=1 Tax=Sino... 179 1e-43 UniRef50_Q0FYH5 Transcriptional regulator, AraC family protein n... 178 2e-43 UniRef50_C9YUR8 Putative transcriptional regulator n=1 Tax=Strep... 178 2e-43 UniRef50_B1JB60 Transcriptional regulator, AraC family n=1 Tax=P... 178 2e-43 UniRef50_B1M2F8 Transcriptional regulator, AraC family n=2 Tax=M... 178 3e-43 UniRef50_UPI0001909644 transcriptional regulator, AraC family pr... 177 3e-43 UniRef50_C4WLC6 Helix-turn-helix domain-containing protein n=1 T... 177 4e-43 UniRef50_Q0K404 Formamidase fused to an AraC-type HTH DNA-bindin... 177 5e-43 UniRef50_Q4KBB6 Transcriptional regulator, AraC family n=9 Tax=P... 177 6e-43 UniRef50_Q1N9N6 Transcriptional regulator, AraC family protein n... 176 7e-43 UniRef50_Q89RN6 Transcriptional regulatory protein n=1 Tax=Brady... 176 7e-43 UniRef50_UPI0001B58744 AraC family transcription regulator n=1 T... 176 8e-43 UniRef50_A5V7R9 Transcriptional regulator, AraC family n=2 Tax=S... 176 9e-43 UniRef50_Q4KD45 Transcriptional regulator, AraC family n=4 Tax=P... 175 2e-42 UniRef50_Q0RZY7 Transcriptional regulator, AraC family protein n... 175 2e-42 UniRef50_D2UCS7 Hypothetical hth arac/xyls-type dna-binding doma... 174 2e-42 UniRef50_C8X8B4 Transcriptional regulator, AraC family n=1 Tax=N... 174 3e-42 UniRef50_C3JDH7 Transcriptional regulator, AraC family n=1 Tax=R... 174 3e-42 UniRef50_Q89T46 Transcriptional regulatory protein n=1 Tax=Brady... 174 4e-42 UniRef50_B1T3D6 Transcriptional regulator, AraC family n=1 Tax=B... 173 6e-42 UniRef50_C8SUL6 Transcriptional regulator, AraC family n=1 Tax=M... 173 7e-42 UniRef50_D1XQJ8 Transcriptional regulator, AraC family n=2 Tax=S... 173 8e-42 UniRef50_A5EGC6 Transcriptional regulator, AraC family n=1 Tax=B... 172 1e-41 UniRef50_A5VEH1 Transcriptional regulator, AraC family n=1 Tax=S... 172 2e-41 UniRef50_D1WYT1 Transcriptional regulator, AraC family n=2 Tax=S... 171 2e-41 UniRef50_B1M4E1 Transcriptional regulator, AraC family n=1 Tax=M... 171 2e-41 UniRef50_C6WAU0 Transcriptional regulator, AraC family n=1 Tax=A... 171 3e-41 UniRef50_B9NWW0 Putative transcriptional regulator n=1 Tax=Rhodo... 170 4e-41 UniRef50_C6QB43 Transcriptional regulator, AraC family n=1 Tax=H... 170 4e-41 UniRef50_C6XP47 Transcriptional regulator, AraC family n=1 Tax=H... 170 5e-41 UniRef50_Q602N6 Transcriptional regulator, AraC family n=1 Tax=M... 170 6e-41 UniRef50_Q1YEQ1 Putative transcriptional regulator n=1 Tax=Auran... 170 7e-41 UniRef50_UPI0001B4F487 putative transcriptional regulator n=1 Ta... 169 8e-41 UniRef50_C9Z9W8 Putative DNA-binding protein n=1 Tax=Streptomyce... 169 9e-41 UniRef50_D0KWJ8 Transcriptional regulator, AraC family n=1 Tax=H... 169 1e-40 UniRef50_UPI0001B4D7D7 AraC family transcriptional regulator n=1... 168 2e-40 UniRef50_UPI00016A440E helix-turn-helix- domain containing prote... 167 5e-40 UniRef50_D0XXU2 Transcriptional regulator, AraC family n=1 Tax=C... 167 5e-40 UniRef50_C7MQT8 DNA-binding domain-containing protein, AraC-type... 167 5e-40 UniRef50_C5SNU8 Transcriptional regulator, AraC family n=1 Tax=A... 166 7e-40 UniRef50_Q0S130 Transcriptional regulator n=1 Tax=Rhodococcus jo... 166 1e-39 UniRef50_B5WCL9 Transcriptional regulator, AraC family n=1 Tax=B... 166 1e-39 UniRef50_Q38ZZ8 Transcriptional regulator, AraC family n=1 Tax=B... 165 2e-39 UniRef50_Q1QJK3 Transcriptional regulator, AraC family n=1 Tax=N... 164 4e-39 UniRef50_B0T4I1 Transcriptional regulator, AraC family n=1 Tax=C... 164 4e-39 UniRef50_A5HV12 Probable transcriptional regulator n=1 Tax=Pseud... 163 4e-39 UniRef50_A0KD53 Transcriptional regulator, AraC family n=9 Tax=B... 163 6e-39 UniRef50_B8HJB6 Transcriptional regulator, AraC family n=1 Tax=A... 163 6e-39 UniRef50_A9GLT2 Transcriptional regulator, AraC family n=1 Tax=S... 163 8e-39 UniRef50_Q0FRN2 Transcriptional regulator, AraC family protein n... 163 9e-39 UniRef50_B1FSR0 Transcriptional regulator, AraC family n=1 Tax=B... 163 9e-39 UniRef50_A5EU33 Transcriptional regulator, AraC family n=1 Tax=B... 163 9e-39 UniRef50_C6XP49 Transcriptional regulator, AraC family with acet... 162 1e-38 UniRef50_B7KY13 Transcriptional regulator, AraC family n=4 Tax=M... 162 2e-38 UniRef50_B7L1S2 Transcriptional regulator, AraC family n=1 Tax=M... 161 2e-38 UniRef50_Q0S609 Possible transcriptional regulator, AraC family ... 161 3e-38 UniRef50_C7HYF2 Transcriptional regulator, AraC family n=1 Tax=T... 160 4e-38 UniRef50_B9JNE0 Transcriptional regulator protein n=1 Tax=Agroba... 160 4e-38 UniRef50_Q89NH4 Transcriptional regulatory protein n=1 Tax=Brady... 160 6e-38 UniRef50_B1M4R6 Transcriptional regulator, AraC family n=1 Tax=M... 160 6e-38 UniRef50_Q89UQ2 Transcriptional regulatory protein n=1 Tax=Brady... 160 7e-38 UniRef50_B2WW34 Transcriptional regulator n=1 Tax=Streptomyces a... 159 1e-37 UniRef50_A0SZ23 Putative transcriptional activator araC family n... 158 2e-37 UniRef50_Q89J39 Transcriptional regulatory protein n=1 Tax=Brady... 158 2e-37 UniRef50_B8H192 Transcriptional regulator n=3 Tax=Caulobacter Re... 158 2e-37 UniRef50_C3JEA3 Transcriptional regulator, AraC family n=2 Tax=R... 158 3e-37 UniRef50_B3Q8F7 Transcriptional regulator, AraC family n=3 Tax=R... 157 4e-37 UniRef50_D0XVC6 Transcriptional regulator, AraC family n=1 Tax=C... 157 5e-37 UniRef50_Q216W5 Transcriptional regulator, AraC family n=2 Tax=B... 157 6e-37 UniRef50_A2SLW3 Transcriptional regulator, AraC family n=22 Tax=... 156 7e-37 UniRef50_Q988I6 Transcriptional regulator n=1 Tax=Mesorhizobium ... 156 8e-37 UniRef50_A6X415 Helix-turn-helix-domain containing protein AraC ... 156 9e-37 UniRef50_B5GZF8 Transcriptional regulator n=1 Tax=Streptomyces c... 155 1e-36 UniRef50_B1FI04 Transcriptional regulator, AraC family n=1 Tax=B... 155 2e-36 UniRef50_Q2IUH6 Transcriptional regulator, AraC family n=10 Tax=... 154 3e-36 UniRef50_A8LBJ6 Transcriptional regulator, AraC family n=1 Tax=F... 153 5e-36 UniRef50_B1M0B6 Transcriptional regulator, AraC family n=1 Tax=M... 153 9e-36 UniRef50_Q6W2D2 Transcriptional regulator n=11 Tax=Rhizobiales R... 152 1e-35 Sequences not found previously or not previously below threshold: UniRef50_B9JMB3 Transcriptional regulator protein n=1 Tax=Agroba... 174 4e-42 UniRef50_C9Z339 Putative AraC family regulatory protein n=2 Tax=... 172 1e-41 UniRef50_B4UXL2 AraC-family transcriptional regulator n=1 Tax=St... 172 2e-41 UniRef50_A0JW90 Transcriptional regulator, AraC family n=1 Tax=A... 170 4e-41 UniRef50_B6YY47 Transcriptional regulator, AraC family n=1 Tax=P... 158 2e-37 UniRef50_Q13QE0 Transcriptional regulator, AraC family n=1 Tax=B... 158 3e-37 UniRef50_C9YUP3 Putative DNA-binding regulatory protein n=1 Tax=... 152 2e-35 >UniRef50_Q47129 Transcriptional activator feaR n=22 Tax=Enterobacteriaceae RepID=FEAR_ECOLI Length = 301 Score = 401 bits (1030), Expect = e-110, Method: Composition-based stats. Identities = 301/301 (100%), Positives = 301/301 (100%) Query: 1 MNPAVDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTW 60 MNPAVDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTW Sbjct: 1 MNPAVDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTW 60 Query: 61 QEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLL 120 QEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLL Sbjct: 61 QEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLL 120 Query: 121 LPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLL 180 LPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLL Sbjct: 121 LPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLL 180 Query: 181 RPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLV 240 RPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLV Sbjct: 181 RPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLV 240 Query: 241 VAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKF 300 VAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKF Sbjct: 241 VAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKF 300 Query: 301 R 301 R Sbjct: 301 R 301 >UniRef50_C4X7N3 2-phenylethylamine catabolism regulatory protein n=9 Tax=Enterobacteriaceae RepID=C4X7N3_KLEPN Length = 320 Score = 321 bits (822), Expect = 3e-86, Method: Composition-based stats. Identities = 186/294 (63%), Positives = 231/294 (78%), Gaps = 3/294 (1%) Query: 8 EFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSD 67 +Q+WL+ INQVCG+F R L E + G +D +A LK+STVT +GVNL RT E+K + Sbjct: 30 AYQRWLATINQVCGHFAARPLKESFHGEIDARYAGSLKVSTVTAAGVNLYRTRNEIKRDN 89 Query: 68 DAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLE 127 DAWFYTVFQL+G+AI+EQD+RQV + AGDITL+DA+RPCS+ WQ++S+Q SLLLPR + Sbjct: 90 DAWFYTVFQLAGEAIIEQDDRQVTLAAGDITLIDAARPCSIVWQQTSRQASLLLPR---Q 146 Query: 128 QYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPVLHQR 187 + P A RLD LPMVQLS RLL ESM LS +ESEAAL+A+ CLLRPVLHQR Sbjct: 147 RVAPTGDITTACRLDKSLPMVQLSQRLLLESMGGTTLSASESEAALEAIACLLRPVLHQR 206 Query: 188 ESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRN 247 + RR +QFQK++ LID +I+ E LRPEW+A ETGMSVRSLYR+FAD+GLVVAQYI+N Sbjct: 207 DPAPSRRVKQFQKIIALIDASIQSEHLRPEWLASETGMSVRSLYRLFADQGLVVAQYIKN 266 Query: 248 RRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKFR 301 RRLD CA A+++ DDEKLAGIG+ WGFSD SHFST FKQRFG+TPG+YR++ R Sbjct: 267 RRLDLCAQALQNVHDDEKLAGIGYRWGFSDHSHFSTAFKQRFGVTPGQYRKRCR 320 >UniRef50_B0KNJ7 Transcriptional regulator, AraC family n=1 Tax=Pseudomonas putida GB-1 RepID=B0KNJ7_PSEPG Length = 304 Score = 280 bits (716), Expect = 5e-74, Method: Composition-based stats. Identities = 133/303 (43%), Positives = 199/303 (65%), Gaps = 4/303 (1%) Query: 1 MNPAV---DNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLS 57 M PA D+ FQ WLSQ+N+ CG+F GR L + G L+ A + +S V + VNL Sbjct: 1 MIPATRITDDRFQAWLSQVNEACGHFNGRKLDPGFVGQLEKCQAGQISMSIVDMTQVNLF 60 Query: 58 RTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQI 117 R +E++ S +Y V Q++G + +E ++++ AGD+TL+DAS P +++ + S+Q+ Sbjct: 61 RGPREIRASGADNYYAVLQMAGTSHIEHQGARIELQAGDLTLIDASAPLDMHFHQRSRQL 120 Query: 118 SLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMV 177 SL+LPR +E CA+R++A P+ ++ ++ E+ +S+ ES+A L A++ Sbjct: 121 SLILPRARVESGTRGTGVACAKRIEAQTPLANMARLMMLETGRTRHMSDHESQAVLDALI 180 Query: 178 CLLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADK 237 LLRP + ++V ER F+K + LID I E L PE+IA E G+S+RSLYR+FA Sbjct: 181 ALLRPAIS-HDTVPGSHERMFRKALALIDQRITCEQLTPEFIAREVGISMRSLYRIFAKH 239 Query: 238 GLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 GLV+AQYIRNRRLDFCA+ +R+ A D+K++ +G+ WGFSD S+FST FK RFG+TPGEYR Sbjct: 240 GLVIAQYIRNRRLDFCAEHLRNPAMDQKVSSLGYAWGFSDSSYFSTAFKARFGVTPGEYR 299 Query: 298 RKF 300 R+ Sbjct: 300 RQH 302 >UniRef50_A8GAE8 Transcriptional regulator, AraC family n=1 Tax=Serratia proteamaculans 568 RepID=A8GAE8_SERP5 Length = 302 Score = 273 bits (698), Expect = 6e-72, Method: Composition-based stats. Identities = 143/293 (48%), Positives = 193/293 (65%), Gaps = 2/293 (0%) Query: 9 FQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDD 68 F++WL++IN CG F R L ++G + A L+LS V + L RT QE+ SD Sbjct: 12 FEEWLAKINSACGRFCARTLGPGFSGAMQEFRAHALRLSVVDAAQTRLYRTQQEIARSDG 71 Query: 69 AWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQ 128 + F+TVFQL G ++MEQ +RQ + AGD+TL+DASR S +Q+ S+QISLL+PR+ LEQ Sbjct: 72 SHFFTVFQLRGSSLMEQGDRQAVLSAGDVTLIDASRTSSFTFQQDSRQISLLMPRSYLEQ 131 Query: 129 YFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPVLHQRE 188 + C RLDA +V+LS +L+ M + +S ESEA L A+ LLRP L R Sbjct: 132 SASDVQ--CVRRLDAQSSVVRLSRQLVLGCMQDTQMSAPESEAILNAVATLLRPALVDRV 189 Query: 189 SVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNR 248 R F + + ID +I+ LRPEWIA E G+SVRSLYRMFA +GLVVAQYI++R Sbjct: 190 VGGDSPPRSFSRTLAFIDTHIQSPQLRPEWIADELGVSVRSLYRMFARQGLVVAQYIKHR 249 Query: 249 RLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKFR 301 RLD CA A+R A + +KLA I + WGF+D SHFST FK RFG++P EYR++++ Sbjct: 250 RLDLCAQALRSAPERQKLATISYDWGFADHSHFSTAFKSRFGVSPSEYRKQYQ 302 >UniRef50_C5CKL4 Transcriptional regulator, AraC family n=1 Tax=Variovorax paradoxus S110 RepID=C5CKL4_VARPS Length = 320 Score = 246 bits (628), Expect = 7e-64, Method: Composition-based stats. Identities = 76/303 (25%), Positives = 128/303 (42%), Gaps = 11/303 (3%) Query: 8 EFQQWLSQINQVCGNFTGRLLTER----YTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEV 63 W I V + E + G + H L +S V + + RT + Sbjct: 15 RLAYWTDMICNVYVQLGCDPVREGDSGNFEGSIRQHTLPSLDVSVVRSGPQKVMRTPGHI 74 Query: 64 KGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPR 123 S D F Q GQ ++ QD R + AGD L D++RP L + +S +QI L LP Sbjct: 75 SRSGDDCFLVSIQARGQGVVRQDGRDAVLAAGDFALYDSTRPYQLLFDDSFEQIVLKLPG 134 Query: 124 TLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN-----PALSETESEAALQAMVC 178 L H + + A + L +++ + PA + + +V Sbjct: 135 ERLRSELHHTEALTATTVSGREGAGHLLLGMIRTLREDIDTLQPASALAVANGVQSILVA 194 Query: 179 LLRPVLHQRES-VQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADK 237 L+ + R + +V ID+ + + L +A + G+S ++R+F + Sbjct: 195 GLQTLPAARSPGLSSLTAYHLARVKRRIDEQLADPSLSVGSLAAQLGVSASHIHRVFKSE 254 Query: 238 GLVVAQYIRNRRLDFC-ADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEY 296 L +QYI RRL+ C D + +A I + GF+D +HFS F++RFG +P E+ Sbjct: 255 PLTPSQYIWERRLEACSRDLLEARLAGRPVAEIAYGRGFNDAAHFSRAFRERFGCSPREW 314 Query: 297 RRK 299 R++ Sbjct: 315 RQQ 317 >UniRef50_Q0SCS8 Transcriptional regulator, AraC family protein n=2 Tax=Rhodococcus RepID=Q0SCS8_RHOSR Length = 342 Score = 244 bits (623), Expect = 3e-63, Method: Composition-based stats. Identities = 79/306 (25%), Positives = 131/306 (42%), Gaps = 9/306 (2%) Query: 3 PAVDN-EFQQWLSQINQVCGNFTGRLLTE----RYTGVLDTHFAKGLKLSTVTTSGVNLS 57 PA D+ +F+ W ++ E R+TG L T GL+LS V V++ Sbjct: 7 PARDDGQFEHWRQAVSTAFVPLAVVSTAEDGPGRFTGTLRTTALGGLQLSEVGGHAVDVR 66 Query: 58 RTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQI 117 RT +K SD QLSG ++ QD+R+ +G GD + D S+P L++ Sbjct: 67 RTRTSIKRSDPGLVKVGLQLSGSGVIVQDDREAVLGPGDFAVYDTSKPYDLHFAGDFSMF 126 Query: 118 SLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN-PALSETESEAALQAM 176 L+ PR LL + A R+ M L L ++ + + A+ Sbjct: 127 VLMFPRELLRIASRELGTVSARRIRGSTGMGALVSPFLTNLHHSVVTGTMPTTPLVEDAV 186 Query: 177 VCLLRPVLHQRESVQPRR--ERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMF 234 + LL + V + ID ++ + L +A +S R L +MF Sbjct: 187 LDLLGAAVQSEAPADATAPGASLLLAVKSFIDAHLHDPTLDTAAVAAHHHVSTRHLQKMF 246 Query: 235 ADKGLVVAQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTP 293 G VA +IR+RRL+ C ++ + + I +G + SHFS +FK+ +G++P Sbjct: 247 EADGHTVAGWIRHRRLEKCRRDLKDIRFRGDSIGTICARYGLVNSSHFSRLFKETYGVSP 306 Query: 294 GEYRRK 299 +R + Sbjct: 307 RAFREQ 312 >UniRef50_B8H6K6 Transcriptional regulator, AraC family n=2 Tax=Actinomycetales RepID=B8H6K6_ARTCA Length = 321 Score = 244 bits (622), Expect = 4e-63, Method: Composition-based stats. Identities = 69/305 (22%), Positives = 133/305 (43%), Gaps = 7/305 (2%) Query: 1 MNPAVDNEFQQWLSQINQVCGNFTGRLL-TERYTGVLDTHFAKGLKLSTVTTSGVNLSRT 59 + + + F W + + + G L + + + VT + + RT Sbjct: 15 LTTSTASSFDHWKHLVAESFVPLAAETADAGNFHGQLRSRVLDRMSIVEVTATSHEVHRT 74 Query: 60 WQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISL 119 + + + +F QL G ++ QD R+ + GD+ + D SRP +L ++++++ + + Sbjct: 75 PALIARAHERYFKLNLQLEGTGLLIQDNREAVLRPGDLAIYDTSRPYTLAFEDTTRIMVV 134 Query: 120 LLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQA-MVC 178 + P L + + A R+ D + + + +++ N + S + L A + Sbjct: 135 MFPCDTLTLPTDYVGQLAAVRMAGDSGLSGIVGQFIRQLSGNLDVLNGPSGSRLAANALD 194 Query: 179 LLRPVLHQRESVQPRR----ERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMF 234 L+ +LH + P R V ID N+ + +L P IA +S R L+ +F Sbjct: 195 LVSTMLHAEMDISPDRMKPQALLAVAVREYIDANLSDPLLSPASIAAAHFISTRHLHNVF 254 Query: 235 ADKGLVVAQYIRNRRLDFCADAIRHA-ADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTP 293 + G VA +IR +RL+ +R + + WGF D +HFS F+ FG+ P Sbjct: 255 HESGTTVAGWIRTQRLEGAGRDLRDPLHAGLPVGAVAARWGFLDAAHFSRTFRDAFGVPP 314 Query: 294 GEYRR 298 ++RR Sbjct: 315 SDWRR 319 >UniRef50_B4E7T1 AraC family regulatory protein n=1 Tax=Burkholderia cenocepacia J2315 RepID=B4E7T1_BURCJ Length = 317 Score = 243 bits (620), Expect = 6e-63, Method: Composition-based stats. Identities = 76/309 (24%), Positives = 136/309 (44%), Gaps = 11/309 (3%) Query: 2 NPAVDNEFQQWLSQINQVCGNFTGRLLTER----YTGVLDTHFAKGLKLSTVTTSGVNLS 57 + W + + T R +TG +D + ++ V + + Sbjct: 8 EAPAAEQADYWSAALASSFVKLDFEPTTSRSGRPFTGHIDQGSLAYVDVAVVNSRAQEVH 67 Query: 58 RTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQI 117 RT + V+ D F Q++G+ +EQD RQ + AGD +L D +RP L +++ +Q+ Sbjct: 68 RTSRLVRQEDADLFLISVQVAGRGELEQDGRQAVLSAGDCSLYDTTRPYHLSFRDDFEQL 127 Query: 118 SLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN-PALSETESEAALQAM 176 L +PR L P + A + + L L+ N +++ E+ ++ Sbjct: 128 VLSIPRDRLRIRIPAADRLTAIPIRGVNGLGSLFFDLVTSIPRNLESMTAQVRESVSNSV 187 Query: 177 VCLLRPVLHQRESVQPRRER-----QFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLY 231 + L+ L S P ++ + + +N+ + L IA GMSV SLY Sbjct: 188 LDLVATALAGLPSPIPAPASNLKQFHLNRIKSYVIENLSDAELDIARIAQTLGMSVSSLY 247 Query: 232 RMFADKGLVVAQYIRNRRLDFCADAIRH-AADDEKLAGIGFHWGFSDQSHFSTVFKQRFG 290 R FA +G ++Q+I ++RL C A+ + + I WGF+D +HFS F+++FG Sbjct: 248 RAFASEGCPLSQWIWDQRLHACRKALLDESCANLSAKQIAMSWGFNDPAHFSRAFRRKFG 307 Query: 291 MTPGEYRRK 299 +P R + Sbjct: 308 ESPNALRTR 316 >UniRef50_Q5YXZ9 Putative transcriptional regulator n=1 Tax=Nocardia farcinica RepID=Q5YXZ9_NOCFA Length = 334 Score = 241 bits (616), Expect = 2e-62, Method: Composition-based stats. Identities = 75/302 (24%), Positives = 123/302 (40%), Gaps = 6/302 (1%) Query: 2 NPAVDNEFQQWLSQINQVCGNFTGRLLTE-RYTGVLDTHFAKGLKLSTVTTSGVNLSRTW 60 P F W I+ T LT + G L H L+L+ V V + R Sbjct: 9 TPPSAERFDTWQETISHAFVPLTATPLTAAGFDGTLSCHEVGSLQLNEVGGGPVRVERDP 68 Query: 61 QEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLL 120 + ++ +D + Q G+ + QD R +G GD+ + D RP +L++ + + I + Sbjct: 69 RAIRRADPGYIKLGLQTRGRGAVVQDGRTAVLGPGDLAVYDTGRPYTLHFDQPFQMIVAM 128 Query: 121 LPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETE-----SEAALQA 175 PR + I A R+ + L L+ A + ++A L Sbjct: 129 FPRESWQIRAAELTEITARRIGGRGGVGALLAPFLRAIPATLACGDLSRDIHIADAVLDL 188 Query: 176 MVCLLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFA 235 + + E + +V ID ++ + +L IA +SVR L R+F Sbjct: 189 LTAAVTEFGGVEERARSAGAGLLVQVKAFIDAHLADPMLSVPDIAAAHHISVRYLQRLFE 248 Query: 236 DKGLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGE 295 +G V +IR RRL+ + D + + WG +D SHFS +FK +GMTP + Sbjct: 249 TEGTTVTTWIRQRRLERIRRDLADPRIDRSTSAVAARWGLADASHFSKLFKAAYGMTPRQ 308 Query: 296 YR 297 YR Sbjct: 309 YR 310 >UniRef50_B1KM98 Transcriptional regulator, AraC family n=2 Tax=Gammaproteobacteria RepID=B1KM98_SHEWM Length = 330 Score = 239 bits (611), Expect = 7e-62, Method: Composition-based stats. Identities = 74/306 (24%), Positives = 135/306 (44%), Gaps = 9/306 (2%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLLT-ERYTGVLDTHF-AKGLKLSTVTTSGVNLSRTWQ 61 A W QI L +R+ G + L +S V ++RT Q Sbjct: 17 ASYERIDYWREQICHEFVQLDCEPLNKDRFHGEIRGGLNFGLLSVSEVQGEAQIVTRTKQ 76 Query: 62 EVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLL 121 ++ S +A+F FQL Q +++Q+ R+ + G TL D+S P SL +++ Q+ + + Sbjct: 77 QIAHSSEAYFLMSFQLFQQGVVKQNGREAILQPGSFTLYDSSEPYSLTFEKEFHQLIIQM 136 Query: 122 PRTLLEQYFPHQKPICAERLDADLPMVQLSHRLL----QESMNNPALSETESEAALQAMV 177 P+ +L +Y H + A L + + + +E + E L + Sbjct: 137 PKHVLSRYLIHPEKYTAVPLSGKEGIGAVLSNFIFSVVKEYKELDTIHPELVENFLNMIA 196 Query: 178 CLLR-PVLHQRESVQP-RRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFA 235 V+H + + ++ ++V++ I++N L + IA G+S+R LY++F Sbjct: 197 MAYSCSVMHNKLKKKALSKDALVERVLSYIENNYANHQLSNQHIADAHGISLRYLYKLFQ 256 Query: 236 DKGLVVAQYIRNRRLDFCADAIR-HAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPG 294 + + Q I+ RRL ++ + D L + + GF+ SHFS FK FG P Sbjct: 257 KQEHTIHQIIQKRRLMMSRQLLQEDSKFDFSLDSLSYAVGFTSSSHFSRAFKDYFGECPR 316 Query: 295 EYRRKF 300 ++R+K Sbjct: 317 DFRQKI 322 >UniRef50_A0K0Q9 Transcriptional regulator, AraC family n=2 Tax=Arthrobacter RepID=A0K0Q9_ARTS2 Length = 319 Score = 239 bits (611), Expect = 7e-62, Method: Composition-based stats. Identities = 72/306 (23%), Positives = 133/306 (43%), Gaps = 9/306 (2%) Query: 1 MNPAVDNEFQQWLSQINQVCGNFTGRL-LTERYTGVLDTHFAKGLKLSTVTTSGVNLSRT 59 + +V F W + Q + + G + + L + V+ SG ++ RT Sbjct: 13 LTSSVATSFDHWRHLVAQSFVPLAAETDHPDTFRGRMRSRVLDRLCIVEVSASGHSVHRT 72 Query: 60 WQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISL 119 V +F QL G ++ QD R+ + GD+ + D +RP +L ++E ++ + + Sbjct: 73 PALVARPGQRYFKLNLQLEGTGLLIQDNREAVLRPGDLAIYDTNRPYTLAFEEQARVMVV 132 Query: 120 LLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN-PALSETESEAALQAMVC 178 + P L + + A RL + + + + N ALS + Sbjct: 133 MFPHDSLSLPPDYVGQLSAVRLAGGHGLTGIVGPFIAQLAENLEALSGPSGSRLAANALD 192 Query: 179 LLRPVLH-----QRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRM 233 L+ +LH R+S++P+ V I+ N+ + L P IA +S R L+ + Sbjct: 193 LVSTMLHSELDMARDSMKPQ-VLLATSVREYIEANLADPQLSPASIAAAHFISTRHLHNI 251 Query: 234 FADKGLVVAQYIRNRRLDFCADAIRHA-ADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMT 292 F + G VA +IR++RL+ +R + + + WGF D +HFS F+ +G + Sbjct: 252 FHETGTTVASWIRSQRLERIRRDLRDPLLNGTSVGAVAARWGFLDAAHFSRTFRDAYGES 311 Query: 293 PGEYRR 298 P ++RR Sbjct: 312 PSDWRR 317 >UniRef50_Q0RX84 Transcriptional regulator, AraC family protein n=2 Tax=Nocardiaceae RepID=Q0RX84_RHOSR Length = 345 Score = 239 bits (610), Expect = 8e-62, Method: Composition-based stats. Identities = 75/297 (25%), Positives = 126/297 (42%), Gaps = 7/297 (2%) Query: 7 NEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGS 66 + W +++ +TG L +S V + RT +++ GS Sbjct: 22 DRVDCWRDLVSRAFVPLDADAAAPDFTGHLRITELGSTIVSRVDAGAHTVRRTRKQISGS 81 Query: 67 DDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLL 126 + ++ QL G ++EQD R+ + GD L D +P +L + + + PR L Sbjct: 82 ERGYYKLGLQLRGDGLLEQDGREALLRPGDFALYDTDQPYTLAFTAPTDMAVFMFPRPRL 141 Query: 127 EQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN-----PALSETESEAALQAMVCLLR 181 I A R+ + L LL ++ P + T ++A L M LL Sbjct: 142 PLPPIMAHDILARRISRSDELGCLLSPLLVRLVDQVDDNRPNAALTLADAVLDLMAALLA 201 Query: 182 PVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVV 241 E + E + T ID N+ L P+ +A +S R L+++F+ G V Sbjct: 202 GNNGTPEPLP--HETLLVQAKTFIDANLSNPDLNPDLVAAAVHVSTRYLHKLFSADGEPV 259 Query: 242 AQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRR 298 A++IR+RRL+ C + ++ +G WG D +HFS FK RF M+P E+ + Sbjct: 260 ARWIRHRRLEQCRRDLSGHTAVPSVSAVGNKWGLPDAAHFSRAFKARFAMSPAEFHK 316 >UniRef50_A5V4Y7 Transcriptional regulator, AraC family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V4Y7_SPHWW Length = 329 Score = 238 bits (607), Expect = 2e-61, Method: Composition-based stats. Identities = 79/302 (26%), Positives = 126/302 (41%), Gaps = 7/302 (2%) Query: 5 VDNEFQQWLSQINQVCGNFTGR-LLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEV 63 W + ++ ++G L +++S V + + RT + Sbjct: 22 AKERLPYWCDMVCDTFVELDCESQESDSFSGELRNIAFGAIQISMVESVAQRVRRTRSRI 81 Query: 64 KGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPR 123 GS F QL G + QD R ++ GD L D++RP L + +S Q+ L LPR Sbjct: 82 AGSTRDHFLLSLQLRGTGAICQDSRVAKLSPGDFALYDSTRPYELRFDDSFSQVVLRLPR 141 Query: 124 TLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQA-MVCLLRP 182 + + A R+D + L+ +++ A + S LQA V L+ Sbjct: 142 ETVTGRLIDSHMLTARRIDGQRGVGLLASSFIRQLHEQRADIDDLSLGRLQANAVDLMAT 201 Query: 183 VLHQRESVQPRRER----QFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKG 238 L ++ Q R Q+V ID N+ + L E IA G+S R L ++F Sbjct: 202 ALAEQTGGQARTNEGQAIIRQRVCAFIDRNLGDHRLTCEGIASAHGISQRYLRKIFESSS 261 Query: 239 LVVAQYIRNRRLDFCADAIRHA-ADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 V+ +I +RRL+ + + IGF GF D +HFS F+ RFGM+P E+R Sbjct: 262 TTVSDWIWSRRLEQAKADLSDPLLAHVSVTAIGFDVGFKDAAHFSRAFRSRFGMSPREWR 321 Query: 298 RK 299 Sbjct: 322 NS 323 >UniRef50_Q5YW11 Putative transcriptional regulator n=1 Tax=Nocardia farcinica RepID=Q5YW11_NOCFA Length = 324 Score = 232 bits (592), Expect = 1e-59, Method: Composition-based stats. Identities = 74/299 (24%), Positives = 128/299 (42%), Gaps = 7/299 (2%) Query: 5 VDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVK 64 D+ W Q+ L R+TG + ++ L+++ + S +++R + Sbjct: 15 PDDSLLAWRVQVTDFFPPLAIEPLGARFTGSISGARSRELQVTEIVGSAHHVARRPAGHR 74 Query: 65 GSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRT 124 SD +F QL G + Q + ++ G I + D ++P L + S+ + L P+ Sbjct: 75 TSDGEYFKLNVQLDGHGFVRQAGNETRLAPGSIAIYDFAQPYDLVFDGDSRFLVALFPKD 134 Query: 125 LLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEA-ALQAMVCLLRPV 183 L + A L AD L L+ N L S A + + L+ Sbjct: 135 ALGLPDALAADLMAAPLAADDGTAPLVSSYLRSLAENLGLLAGPSGAKVSRVFLDLVTTF 194 Query: 184 LHQR-----ESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKG 238 L ++ S + ++ IDD++ + L P +A +SVR L+++F G Sbjct: 195 LGEQLNRRIGSARADLGTLTMTILRYIDDHLADPDLDPARLAEAHHISVRYLHKLFEPTG 254 Query: 239 LVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 + V Q+IR RRL+ + D +A + GF D +F VFKQ +GMTPG++R Sbjct: 255 VSVGQWIRQRRLEHARAELT-GRADLAVAEVAHRSGFVDPGYFGRVFKQAYGMTPGQWR 312 >UniRef50_A2SEG7 Transcriptional regulator, AraC family n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SEG7_METPP Length = 318 Score = 229 bits (583), Expect = 1e-58, Method: Composition-based stats. Identities = 67/305 (21%), Positives = 123/305 (40%), Gaps = 9/305 (2%) Query: 5 VDNEFQQWLSQINQVCGNFTGRLLTE--RYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 W + + + R+ G + L LS VT S + RT + Sbjct: 12 PAQRLAYWTDGVCDTYVQLDCDAIGDASRFEGEIAADALSTLTLSRVTASAQRVRRTPAK 71 Query: 63 VKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLP 122 + + + +F Q G + QD R + GD L D++RP L + + +Q L+LP Sbjct: 72 IARASEDYFLVSIQTQGCGAVVQDGRVAHLSPGDFALYDSTRPYELRFDAAFQQYVLMLP 131 Query: 123 RTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMN-----NPALSETESEAALQAMV 177 L + A + L +++ P + +++ Q ++ Sbjct: 132 GPTLRTALTDTPSLTACAVSGRRGAGHLMIGMIETLSAEIATLAPESAAAVADSVTQILI 191 Query: 178 CLLRPVLHQRESVQPRR-ERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFAD 236 L + R R Q+V L+ + +R+ L IA G+S +L+R +A Sbjct: 192 AGLSTLPGARPPPVSRLVALHRQQVKALVRERLRDPDLTVVRIAERLGVSPSTLHRAWAG 251 Query: 237 KGLVVAQYIRNRRLDFCADAIRHAADD-EKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGE 295 + +A +I+ RL+ + A +++ + + WGF D +HFS F++RFG +P E Sbjct: 252 EACSLADWIQTERLEAARRDLCAAQQRLRRVSELAYSWGFKDAAHFSRAFRRRFGCSPRE 311 Query: 296 YRRKF 300 R + Sbjct: 312 LRARI 316 >UniRef50_A2SM26 Transcriptional regulator, AraC family n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SM26_METPP Length = 324 Score = 227 bits (579), Expect = 4e-58, Method: Composition-based stats. Identities = 74/300 (24%), Positives = 131/300 (43%), Gaps = 5/300 (1%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLL-TERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 A+ + W + ++ + + L GL++ R + Sbjct: 25 ALADRTDAWEAALSDNFRRWQVPDRVAPEFNARLRHRDVAGLRVVECICDPCGGRRLPRH 84 Query: 63 VKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLP 122 V A+ SG+ + + +V +G GD+ + + +P E ++SL+LP Sbjct: 85 VSQEGAAYIGVQITRSGRESLRAGDERVAVGPGDLVIWTSDQPMEFTVTERLHKVSLILP 144 Query: 123 RTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN-PALSETESEAALQAMVCLLR 181 +++ P LD+ + + + ++ + L E A +A V LL Sbjct: 145 WDDVKERLPRTGRFRGTVLDSRSGIGAVLYSHIESLASQLEDLEAGELSAVRRATVELLT 204 Query: 182 PVLHQRESVQPR--RERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGL 239 + R PR +Q ++V I D++++E L P IA +S R L+ +F G Sbjct: 205 AAMSCRLEPAPRGLSLQQLKRVQDYILDHLQDETLTPGSIAQAHHISPRYLHLLFGKTGQ 264 Query: 240 VVAQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRR 298 V+ YIR +RL+ C +A+ + + + +A I + WGF+D +HFS VFKQ FG PG RR Sbjct: 265 SVSAYIRQQRLERCGEALSNPSYREHSVAEIAYQWGFTDPAHFSRVFKQHFGHPPGHCRR 324 >UniRef50_Q89GD7 Transcriptional regulatory protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89GD7_BRAJA Length = 331 Score = 226 bits (576), Expect = 8e-58, Method: Composition-based stats. Identities = 72/304 (23%), Positives = 128/304 (42%), Gaps = 9/304 (2%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLLTE-RYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 F W +++ + RL+ E ++ + GL L + S R+ + Sbjct: 22 PPRERFDYWHDVVSRNLVDLDFRLVGEAQFDASFHSTPINGLDLCRIKASPHVAQRSTEG 81 Query: 63 VKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLP 122 + +D + F LSG + EQD R + GD L DA+RP L QE+ + S+ +P Sbjct: 82 ILRADHSMLVFNFVLSGSLVAEQDGRLAHLKPGDGALCDATRPYKLSSQEAFELASIRVP 141 Query: 123 RTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAA-------LQA 175 R PH + A L + + L ++ + + Sbjct: 142 REQCIGRIPHLNRLSACNLGERSELAPMVFGYLSHLVDRAPHLTSRAAGLKISQNFKDLL 201 Query: 176 MVCLLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFA 235 + L S+ R ++ ++ N+ + L P IA E +S R + ++ Sbjct: 202 LALLAELADSCASSLTEYRSLALMRIKETVERNVHDPDLTPSTIAAELKLSARYINQLLE 261 Query: 236 DKGLVVAQYIRNRRLDFCADAIRHAADDEK-LAGIGFHWGFSDQSHFSTVFKQRFGMTPG 294 +G +++YI +RRL+ CA+ ++ A + ++ I GF+D SHFS F+ +FGM P Sbjct: 262 TEGTSLSRYIWSRRLNRCAEQLKDPALRARGVSQIAMDNGFNDLSHFSKAFRIKFGMAPR 321 Query: 295 EYRR 298 +YR Sbjct: 322 DYRN 325 >UniRef50_Q500U0 Helix-turn-helix, AraC type n=2 Tax=Pseudomonas syringae group RepID=Q500U0_PSEU2 Length = 324 Score = 226 bits (576), Expect = 8e-58, Method: Composition-based stats. Identities = 71/299 (23%), Positives = 126/299 (42%), Gaps = 6/299 (2%) Query: 5 VDNEFQQWLSQINQVCGNFT-GRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEV 63 V + W + + + G L +H GL L V + R + Sbjct: 12 VRERAEFWQEVVCSTFVPLECAFPDRQNFQGRLRSHSVAGLGLVEVQACEQTVVRDTSSI 71 Query: 64 KGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPR 123 SDD + L G+A + Q+ R+ + GD + D RP L++ + Q + +PR Sbjct: 72 SRSDDEFVLVSLALEGRAQVSQEGREAILEVGDFAIYDTRRPYRLHFDSAFSQTVVQIPR 131 Query: 124 TLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMN-NPALSETESEAALQAMVCLLRP 182 L+Q + + + A + D P+ L + E++ + + LL Sbjct: 132 NSLQQRLCNLEYLTALSMSRDNPLNGLVFDFFTGLAALENRVGESQQARITEQGLDLLAM 191 Query: 183 VLHQR---ESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGL 239 L +R ++ RR ++ I N+ + L ++ G+S R + +F D+ Sbjct: 192 ALSERVKGQAQGSRRSGLLLRIKDHIQANLADTKLSLASVSVRFGVSTRYVSSLFQDEQT 251 Query: 240 VVAQYIRNRRLDFCADAIRHA-ADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 +Y+ RL CA +R + +++ I + WGFSD ++FS VF+QRFG+ EYR Sbjct: 252 SFGRYLLGSRLQRCASDLREPLLANRQISEIAWRWGFSDVAYFSRVFRQRFGVPAREYR 310 >UniRef50_Q0S4H2 Probable transcriptional regulator, AraC family protein n=2 Tax=Rhodococcus RepID=Q0S4H2_RHOSR Length = 329 Score = 226 bits (576), Expect = 9e-58, Method: Composition-based stats. Identities = 75/299 (25%), Positives = 133/299 (44%), Gaps = 9/299 (3%) Query: 8 EFQQWLSQINQVCGNFTGRLLT-ERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGS 66 F ++ ++ + + GV+ +++S VT + + RT + ++ + Sbjct: 17 SFDEFREAVSDAFVPLEMTSADHDDFRGVVRGVTVGAVRISEVTAAPHVIRRTPRTIRAA 76 Query: 67 DDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLL 126 + +F Q+ G ++ QD R+ + GD + D +RP L + + + + ++ PR LL Sbjct: 77 NPDYFKLGLQVRGNCVLSQDGRETALTPGDFAIYDTTRPYQLSFDDRFRMLVVMFPRHLL 136 Query: 127 EQYFPHQKPICAERLDADLPMVQLSHRLL-----QESMNNPALSETESEAALQAMVCLLR 181 + A R+ + + LL Q + +P ++ +A L + Sbjct: 137 RVPPDGVAQLTARRVPGGQGLGAVVTPLLRGLGEQIADASPTVAVHLGDAVLDLVAAAFA 196 Query: 182 PVLHQRESVQP--RRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGL 239 LH V P R + +V ID+ + + L IA +SVR L +MF G Sbjct: 197 EQLHLAGGVLPQSRGDALLARVTAFIDERLADRDLDLHSIAAAHHISVRHLQKMFEADGD 256 Query: 240 VVAQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 V+ +IR RRL+ C + + D ++ IG WGF+D +HFS +FK G TPG YR Sbjct: 257 TVSGWIRRRRLEQCRRDLADPSYRDLPVSAIGARWGFADAAHFSRLFKNAHGSTPGRYR 315 >UniRef50_UPI0001873BA5 Helix-turn-helix, AraC type n=1 Tax=Pseudomonas syringae pv. tomato T1 RepID=UPI0001873BA5 Length = 311 Score = 224 bits (571), Expect = 3e-57, Method: Composition-based stats. Identities = 71/298 (23%), Positives = 130/298 (43%), Gaps = 8/298 (2%) Query: 4 AVDNEFQQWLSQINQVCGNFTG-RLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 F+ W ++ G RL + L+ + + +S + R ++ Sbjct: 11 PPKERFEHWQDVVSSTYGLVASQRLNKTPFDARLNVRDQGSFTFTRIQSSPIQYQRLGRD 70 Query: 63 VKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLP 122 + SD A + Q+ R+ + G GDI L D++RP + + E QI L +P Sbjct: 71 -QESDHFLISLSLGCCPDAFVVQNNRESRQGTGDIVLYDSARPYACGYPEGDDQIVLTVP 129 Query: 123 RTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRP 182 R L ++ P+ + + L P+ Q++ LL E + L + + E A + +L Sbjct: 130 RAFLLEHVPNAERLVCRTLSGQSPLGQIARTLLAEIWSIEPLPQQQGERLNAAFLDVLYT 189 Query: 183 VLHQRESVQPRRERQFQ-----KVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADK 237 L ++ + FQ +V + N+ + L E IA T +S R+L R+FA Sbjct: 190 ALDSAFALTDCKRESFQTQQLKRVKQYLLSNLPDAGLTVESIAQATHVSPRTLNRLFAPH 249 Query: 238 GLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGE 295 G V +++ +RL C A+ +++ + GF++ SHFS FK +G++P + Sbjct: 250 GTTVIRWLWQQRLAACHTALLKGRA-RQVSDVALSMGFTNLSHFSRAFKNAYGVSPQQ 306 >UniRef50_B8GZF8 Transcriptional regulator, AraC family n=2 Tax=Caulobacter vibrioides RepID=B8GZF8_CAUCN Length = 312 Score = 224 bits (570), Expect = 4e-57, Method: Composition-based stats. Identities = 69/296 (23%), Positives = 117/296 (39%), Gaps = 9/296 (3%) Query: 9 FQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDD 68 W + + N E + G +D G+ L+ V +S + R Sbjct: 17 LDAWNALVASTFDNLVVDADREAFEGSIDVRDLGGMDLARVASSAAVVRRGRASWTRRP- 75 Query: 69 AWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQ 128 +F Q G+++ QD R+ + GD+ L D +RP ++ + + ++ + L +P L Sbjct: 76 -YFKLHLQDVGRSLNSQDGREAVLDEGDLMLCDPARPYTIRFDDPNRMLVLRIPSERLAD 134 Query: 129 YFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPVLHQRE 188 + +C RL D L ++ N A+Q L + Sbjct: 135 RMDDPEALCGRRLAGDSLAGALLTSFIRTLWTNAGRGCAPVGEAVQDAALSLLSAAAREG 194 Query: 189 SVQPRRERQF-------QKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVV 241 + R ++ IDDN+ + L +AG G+S R + +FA Sbjct: 195 EGEAPAPRDLDASHGAGARIKRFIDDNLCDPELSVGRVAGALGVSPRYVQMVFAGMATTP 254 Query: 242 AQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 YIR +RL+ A A+R + + F GF+D SHFS FK +G+ P E+R Sbjct: 255 LAYIRRKRLERAARALREDGVGCNITDLSFGLGFNDLSHFSRAFKAFYGVGPREFR 310 >UniRef50_P72312 Nitrilase regulator n=1 Tax=Rhodococcus rhodochrous RepID=P72312_RHORH Length = 319 Score = 224 bits (570), Expect = 4e-57, Method: Composition-based stats. Identities = 61/297 (20%), Positives = 122/297 (41%), Gaps = 4/297 (1%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLLTER-YTGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 + + W I + L +E+ + G + T ++++T ++ ++RT + Sbjct: 11 SAPDRVALWHDVICRSYVPLNITLTSEQPFIGTVSTGNLGTVRIATSSSLPQQITRTRRL 70 Query: 63 VKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLP 122 ++ + + Q +G A+++Q R ++G G + D P + + + P Sbjct: 71 IRQDEREYLMVGVQSAGHALVQQHGRTARVGRGGLVFWDTRHPYDILFPTDWRMSVFQFP 130 Query: 123 RTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMN-NPALSETESEAALQAMVCLLR 181 R + A + D + ++ + + A E + + V LL Sbjct: 131 RYSFGFTEDFIGRMTAVNVGGDRGIGRVVSSFMTSINDATDAGDLAEVASLHNSAVDLLS 190 Query: 182 PVLHQRESVQ-PRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLV 240 + + Q + + V+ I N+ + L IA E +SVR+L+R+F+ G Sbjct: 191 AAIRTELADQAAASDGLLECVLAYIRQNLADPNLCASQIAAEHNVSVRTLHRLFSATGQG 250 Query: 241 VAQYIRNRRLDFCADAIRHAADDE-KLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEY 296 VA++IRN RL+ + ++ + WGF D S FS FK +G+T E+ Sbjct: 251 VAEHIRNLRLERIKTELADPTSRRYTISALARKWGFLDPSTFSRAFKDAYGITAREW 307 >UniRef50_C0GAC0 AraC-family transcriptional regulator n=4 Tax=Brucella RepID=C0GAC0_9RHIZ Length = 332 Score = 224 bits (570), Expect = 4e-57, Method: Composition-based stats. Identities = 69/304 (22%), Positives = 120/304 (39%), Gaps = 7/304 (2%) Query: 5 VDNEFQQWLSQINQVCGNFTGRLL-TERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEV 63 + + W I +R++G L T + +S +T+ + R Sbjct: 24 APDRSRHWHDAIASAYFPLDLHFREADRFSGDLTTWEFGNVSISRLTSDALQYLRLPHHF 83 Query: 64 KGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPR 123 S + F + + Q R+V+ G L +S P E++ L + Sbjct: 84 GSSREEEFLVTVPVKAEVYFSQCGREVRCRPGGFFLERSSEPYHFSHAEAADMWVLKVEG 143 Query: 124 TLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN-PALSETESEAALQAMVCLLRP 182 L C + A+ L +LQ + +++ + +V LL Sbjct: 144 DALCGRMRAPDRFCTLQFGANNGAGGLFTDMLQLLPDRFDGMTQEARITVGRQLVDLLVL 203 Query: 183 VLHQRESV-----QPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADK 237 + + V R ++ I N+++ L P+ IA G+S R L+ +F D Sbjct: 204 AIKADDRVLTSGNSTVRSAHLARIEAYIRTNLQDFRLDPDRIARACGISTRYLHELFKDT 263 Query: 238 GLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 G V +IR +RL C +A+ + + A I + WGF+DQ+ FS FK +FG+ PGE+R Sbjct: 264 GQTVRHWIREQRLAACREALEDPDNIQTAAEIAYSWGFNDQTQFSRAFKAQFGLPPGEHR 323 Query: 298 RKFR 301 R Sbjct: 324 ENAR 327 >UniRef50_A1VU02 Transcriptional regulator, AraC family n=4 Tax=Comamonadaceae RepID=A1VU02_POLNA Length = 340 Score = 223 bits (568), Expect = 6e-57, Method: Composition-based stats. Identities = 63/301 (20%), Positives = 128/301 (42%), Gaps = 6/301 (1%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLLTER-YTGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 A W ++ + G L + + G + T A + ++ + + + R+ Sbjct: 13 ASTERALAWEHWMSGLFGGLDSDLYGDSVFDGHIATSHAGDVVMTRLEANRHRVMRSPGL 72 Query: 63 VKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLP 122 + SD ++ + G A +EQ RQ + G + D + + E S + ++LP Sbjct: 73 ARTSDMSYLKIIAPWQGNAALEQQGRQTWVRPGGWAIYDTTGSYEVANPERSLHLIVMLP 132 Query: 123 RTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN-PALSETESEAALQAMVCLLR 181 R L + + + + +++ ++ P ++ + A ++ L+R Sbjct: 133 REQLTERGLRIDALMGRLVGGSSGISRVALETMRSIFQELPLMTPEAARGAGDLVIDLVR 192 Query: 182 PVLHQ---RESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKG 238 L + R + ++E ++ I ++R+ L + IA S R L+ FAD+ Sbjct: 193 LSLQELAGRTTATTQQEALKDRIRDFIGQHLRDPDLSLDRIAQVLNCSKRHLHNAFADEE 252 Query: 239 LVVAQYIRNRRLDFCADAIRHAAD-DEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 + YI RRL C +++ + I F WGF++ +HFS VF++ G++P E+R Sbjct: 253 DTLGHYILRRRLQACMRDLKNPVHLPRTITDIAFSWGFNNGTHFSRVFREHAGLSPSEFR 312 Query: 298 R 298 R Sbjct: 313 R 313 >UniRef50_B0RKH8 AraC family transcription regulator protein n=1 Tax=Herbaspirillum seropedicae RepID=B0RKH8_HERSE Length = 350 Score = 222 bits (567), Expect = 9e-57, Method: Composition-based stats. Identities = 73/303 (24%), Positives = 133/303 (43%), Gaps = 11/303 (3%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLLTE----RYTGVLDTHFAKGLKLSTVTTSGVNLSRT 59 A + F W + + + L + + G + + + V + ++ R Sbjct: 10 AQNERFSYWREVLCEAFVSLNPILNEKHTVIDFAGEVSSRSLSTTAQTRVFSKAQHIQRR 69 Query: 60 WQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISL 119 +E++ + + + FQL G ++ QD ++ + GD +++D++RP L +Q +S Sbjct: 70 GEEIRRNPVEYCFANFQLEGSCVVRQDGQESMVLPGDFSIVDSTRPYFLDYQGDWHVLSF 129 Query: 120 LLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQES----MNNPALSETESEAALQA 175 +PR + A R+D M ++ R + ++ + + AAL + Sbjct: 130 RIPREQVISRLASPYKATARRVDGKAGMGLVASRFARSLEQVDLDMGSGVQDCLSAALNS 189 Query: 176 M--VCLLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRM 233 + + L + Q P RE V T I D++ E L P+ +A +S R+LY + Sbjct: 190 IIAIALGATLEAQERDRLPVREAIRLAVETYIRDHLEEPHLGPDMLASRFKVSRRTLYSL 249 Query: 234 FADKGLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTP 293 F + L V+ IR RL A + + + WGFSD SHFS +FK+RFG+ P Sbjct: 250 FEEAPLSVSSLIRELRLQRSARDLLSPGHPG-VLAVALRWGFSDASHFSRLFKRRFGVCP 308 Query: 294 GEY 296 E+ Sbjct: 309 REF 311 >UniRef50_B1Z4N2 Transcriptional regulator, AraC family n=6 Tax=Burkholderia cepacia complex RepID=B1Z4N2_BURA4 Length = 352 Score = 222 bits (567), Expect = 9e-57, Method: Composition-based stats. Identities = 67/303 (22%), Positives = 138/303 (45%), Gaps = 7/303 (2%) Query: 4 AVDNEFQQWLSQINQVCGNFT-GRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 +V + W I ++ + + + + G + L++S + S ++R + + Sbjct: 43 SVSQRIEFWREMILRLFADVQIAAVQKDDFFGRVRQRKCDKLRISDIHASEQAVTRRFHQ 102 Query: 63 VKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLP 122 + + ++ V L G +EQD + V + GD + DA+RP L + +S ++I + +P Sbjct: 103 ARSEYEDKYFAVLMLEGSQSVEQDGKIVTLRPGDFAVYDATRPHHLQFGQSWREIVVSIP 162 Query: 123 RTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN-PALSETESEAALQAMVCLLR 181 RT L Q + A + + + L++ + +SE E + L+ Sbjct: 163 RTTLNQLVVGMEHRTACPMPTGQGVGCVMRGFLEQMSSQIRHVSEDEMLQLSDTAISLIA 222 Query: 182 PVLHQRESVQPRRERQ----FQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADK 237 + + + R +V + +++R+ L P + TG+S R + ++F + Sbjct: 223 MTIGSLQRNDVAQSRMKALTLTRVKRHLLEHLRDPELNPTMVEQATGISSRYINKLFEAE 282 Query: 238 GLVVAQYIRNRRLDFCADAIRHAADD-EKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEY 296 + +YI N RL+ CA+ + + +++ I WGF+D SHFS F++RF + P + Sbjct: 283 NTSLMRYIWNLRLERCAEDLANPQCGVLRVSDIALRWGFNDMSHFSRAFRERFAVAPRAW 342 Query: 297 RRK 299 RR+ Sbjct: 343 RRQ 345 >UniRef50_B1G4X3 Transcriptional regulator, AraC family n=1 Tax=Burkholderia graminis C4D1M RepID=B1G4X3_9BURK Length = 312 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 70/295 (23%), Positives = 121/295 (41%), Gaps = 8/295 (2%) Query: 5 VDNEFQQWLSQINQVCGNFTG-RLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEV 63 F W + + C L ++ G L L +S + R + Sbjct: 12 PSQRFAYWQEVVCRHCIPAASVPLSGNQFDGSLRVRTLGTLIISELIAPQHRWQRDGAHI 71 Query: 64 KGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPR 123 + + F+ + G+ + Q R V GD+ L DA+RP + I + +PR Sbjct: 72 RTGPNDSFWVGLMMKGEGRLAQSGRTVVQREGDMVLYDAARPFEFELAAGTICI-VEVPR 130 Query: 124 TLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAAL--QAMVCLLR 181 +L+ FP + A + AD+P+ L ++++ES S +L A+V +L Sbjct: 131 KVLDFRFPLADTLTATCIGADMPIGHLLAQMIRESAARDLSGNQGSSGSLVGSAIVDMLA 190 Query: 182 PVLH---QRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKG 238 L R + E ++ ID ++ L E +A +S R+L R FA +G Sbjct: 191 ATLEIQAGRPAHVSAHEALVERTKAYIDRHLDVASLDVEQLAAAQSVSSRTLTRAFAQQG 250 Query: 239 LVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTP 293 ++ RRL+ A++ + +GFSD SHFS F++ +GM+P Sbjct: 251 STPMSWLWRRRLEASYCALKEGHA-RNVTEAALRFGFSDLSHFSRAFRKVYGMSP 304 >UniRef50_A1R5Y4 Transcriptional regulator, AraC family n=1 Tax=Arthrobacter aurescens TC1 RepID=A1R5Y4_ARTAT Length = 328 Score = 221 bits (563), Expect = 2e-56, Method: Composition-based stats. Identities = 78/300 (26%), Positives = 128/300 (42%), Gaps = 5/300 (1%) Query: 4 AVDNEFQQWLSQINQVCGNFT--GRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQ 61 + N W ++ E G + + L+ V S ++ RT Sbjct: 11 SPRNSVSFWTEAVSDTFVVLDCKAGDGRESIDGEIAVQTLASIDLARVRASAQSVHRTPA 70 Query: 62 EVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLL 121 + S D ++ Q G ++ QD R + G L D +RP SL + +Q+ + L Sbjct: 71 AIDASSDDYYLVGMQTEGSCLVTQDGRSAALHDGGFALYDTTRPYSLLLTDHFEQLVIRL 130 Query: 122 PRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN-PALSETESEAALQAMVCLL 180 PRT LE+Y P + A ++AD +L +Q N+ LS + + Q + L+ Sbjct: 131 PRTALERYLPEAARLTALAVNADPGAGRLLVNTVQFLANDIDVLSPDVALSVSQGVEHLI 190 Query: 181 RPVLHQRESVQPRRERQFQK--VVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKG 238 L P R ++ V T I +N+ +E L + IA + +S S++R FA G Sbjct: 191 VAGLGGLTRGVPDAHRISRRKLVQTHILENLGDESLSIKSIASDLHLSPSSIHRAFAADG 250 Query: 239 LVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRR 298 V ++ +RL + + + L + WGFSD SHFS F+QR+G P + R Sbjct: 251 ETVMGWVWQQRLKSIRETLLTGRYEGTLTDLFLTWGFSDPSHFSRAFRQRYGHAPSQLLR 310 >UniRef50_Q28KV9 Transcriptional regulator, AraC family n=1 Tax=Jannaschia sp. CCS1 RepID=Q28KV9_JANSC Length = 337 Score = 220 bits (560), Expect = 6e-56, Method: Composition-based stats. Identities = 71/300 (23%), Positives = 135/300 (45%), Gaps = 8/300 (2%) Query: 8 EFQQWLSQINQVCGNFTGRLLT-ERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGS 66 + W +++ L TG + + + S V + + RT + ++ Sbjct: 15 RVEAWQDIVSRTFVTLACDLPDKTDVTGSIASIGNGPISASLVDSVAQTVDRTRRLIRQD 74 Query: 67 DDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLL 126 D FQ+ G+ +++Q +RQV++ GD T+ D++ P L ++E Q+ L +PR LL Sbjct: 75 DAEVALISFQIEGECLLQQRDRQVRLRPGDFTIYDSTSPYDLQFEEDFCQLVLHMPRDLL 134 Query: 127 EQYFPHQKPICAERLDADLPMVQLSHRLLQE-SMNNPALSETESEAALQAMVCLLRPVLH 185 + + ICA+R +D + L++ ++ +L +E ++ + L+ + Sbjct: 135 RRRLGPVRQICAQRFGSDTGANSFAGAYLKQIALQLTSLETATAEHHIKTALDLVGYAVE 194 Query: 186 QR-----ESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLV 240 Q V+ + ++V +I + R++ L +A G+S R L + A+ G Sbjct: 195 QNVQPCGHDVRRQSAAIREQVAQVISKHFRDDQLSTPSLARAVGISSRRLQEVCAEVGTT 254 Query: 241 VAQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRK 299 I + RL+ +D +R A + I F GF D S FS +K +G+TP E R+ Sbjct: 255 PMNAIWDIRLEKASDMLRSPAFAHLSITDICFACGFGDSSQFSRRYKTMYGVTPREDRKS 314 >UniRef50_B9K5S9 AraC-type DNA-binding domain-containing protein n=1 Tax=Agrobacterium vitis S4 RepID=B9K5S9_AGRVS Length = 288 Score = 219 bits (558), Expect = 9e-56, Method: Composition-based stats. Identities = 62/275 (22%), Positives = 122/275 (44%), Gaps = 10/275 (3%) Query: 31 RYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQV 90 + G + H + +S + + ++RT ++ +A+ + Q++G + Q R Sbjct: 17 DFRGAVTDHPFDEIGISNIASLKQTIARTTSGIRRDTNAYCFLNLQVAGTCRIRQGNRDA 76 Query: 91 QIGAGDITLLDASRPCSLYWQES-SKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQ 149 G+ T++D+S P L + +Q + +P+ + + + H+ A + P+ + Sbjct: 77 ITMPGEFTVVDSSEPFLLDYTSDTWEQYAFKIPKHMFDSHVGHE--FVARTVTDRTPIGK 134 Query: 150 LSHRLLQESMNNPALSETESEAALQAMVCLLRPVLHQRESVQPR------RERQFQKVVT 203 + L NP S + ++ L+ L + R Q V+ Sbjct: 135 VVVDFLASIARNPENLRHSSINMTKTIIDLVAMSLRASTPERDDDRRRTFRSPLRQSVLR 194 Query: 204 LIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAADD 263 ++ N + + P +A G+S R L+++ + G + Q I +RLD CA +R Sbjct: 195 YVELNFADPEISPAKVAAHFGISTRYLHKLLEEHGETLGQIILAKRLDRCASELRKGTC- 253 Query: 264 EKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRR 298 ++ F WGF+D S+FS F++RFG+ P +YRR Sbjct: 254 LTISEAAFRWGFNDMSYFSRAFRRRFGVAPRDYRR 288 >UniRef50_Q4ZUB6 Helix-turn-helix, AraC type n=1 Tax=Pseudomonas syringae pv. syringae B728a RepID=Q4ZUB6_PSEU2 Length = 309 Score = 219 bits (558), Expect = 1e-55, Method: Composition-based stats. Identities = 74/297 (24%), Positives = 142/297 (47%), Gaps = 10/297 (3%) Query: 5 VDNEFQQWLSQINQVCGNFTGRLLTER-YTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEV 63 ++ F W ++ G + L E + G L+ + + + +S ++ R Q+ Sbjct: 12 PEDRFDAWQEVVSSTYGLVASQPLNEAPFDGRLNVRGQGSVTFTRIQSSPLHYRRLQQD- 70 Query: 64 KGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPR 123 + F L A++ Q++R+ + GAGDI L D+++P + + E QI L +PR Sbjct: 71 --RESDHFLLTLSLCPDALVVQNDRESRQGAGDIVLYDSAQPYACRYPEGDDQIVLTVPR 128 Query: 124 TLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPV 183 LL Q+ P + + LD + +++ +L E+ N LS+ SE +++ +L Sbjct: 129 KLLLQHIPSAERLVCRTLDGHSALGRVAAVVLTEAWNAEGLSDPLSERLNASLLDVLSTA 188 Query: 184 LHQ-----RESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKG 238 Q + +Q Q++ + +N+ + L E IA T +S R+L R+FA +G Sbjct: 189 FDSVFGDTDIRRQSHQMQQLQRIKQFLLNNLPDTGLTAENIALATHVSPRTLNRLFAREG 248 Query: 239 LVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGE 295 +++ +RL C DA+ +++ ++GF++ SHFS FK +G+ P + Sbjct: 249 TTAIRWLWQQRLSACHDALLKRHV-RRVSDAALNFGFTNLSHFSRAFKNAYGIPPQQ 304 >UniRef50_B5S3I4 Probable transcription regulator sugar transport system, abc transporter permease protein n=1 Tax=Ralstonia solanacearum RepID=B5S3I4_RALSO Length = 335 Score = 219 bits (557), Expect = 1e-55, Method: Composition-based stats. Identities = 71/315 (22%), Positives = 126/315 (40%), Gaps = 18/315 (5%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLLTER-YTGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 A N W I + ++ + ++G L + L ++ V R +E Sbjct: 11 AASNSVAYWTEVICGMQAPVQTHVIGDTPFSGRLAVERLGAVLLCHFRSTPVRYVRGQRE 70 Query: 63 VKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLP 122 + F L+G+AI+ QD ++V GDI L D +RP QI L +P Sbjct: 71 IDRDPGDAFGASLTLTGRAIIAQDGKEVVQHPGDIVLFDTTRPFDYVLPSGDDQIVLDIP 130 Query: 123 RTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPA-------LSETESEAALQA 175 R LL+ P+ L + L ++L++ + + Sbjct: 131 RALLQSCLPNADAFLCTVLSGGSKLGGLVGQMLRDVGTDGPRAGGAGGADAAVAARLGTT 190 Query: 176 MVCLLRPVLHQRE------SVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRS 229 +V LL + P R +KV + D + + L IA + +SVR+ Sbjct: 191 VVHLLATAFEVESDSGKSVPLPPAGPRTLEKVKAFMRDCLSDPGLDIAAIARDNHVSVRA 250 Query: 230 LYRMFADKGLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRF 289 L+R+FA +G +++ +RL ++ A +++ + GF++ SHFS F++ F Sbjct: 251 LHRLFAAEGTTAMRWLWQQRLLAGYQSLA-AGRGHRVSEVALMCGFTNFSHFSRAFRRAF 309 Query: 290 GMTPGEY---RRKFR 301 GM P + R + R Sbjct: 310 GMPPTDLLRPRAQRR 324 >UniRef50_B9K0H9 AraC-type DNA-binding domain-containing protein n=1 Tax=Agrobacterium vitis S4 RepID=B9K0H9_AGRVS Length = 311 Score = 217 bits (553), Expect = 3e-55, Method: Composition-based stats. Identities = 71/299 (23%), Positives = 130/299 (43%), Gaps = 8/299 (2%) Query: 6 DNEFQQWLSQINQVCGNFTGRLLTE-RYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVK 64 + F W + + L E R+ G + + + ++T+++S + R ++ Sbjct: 12 RDRFPYWREVLCEAYIALNPILEGEQRFKGEVKANLLDCINVTTISSSRQKIHRRRLDIS 71 Query: 65 GSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPC-SLYWQESSKQISLLLPR 123 ++ Q+ GQ M Q R+ + GD +L+D++ P + Y + Q S +PR Sbjct: 72 RMPHEVYFLNLQVKGQCRMMQGSREALLEPGDFSLVDSTEPYLNDYCSDDWTQYSFRIPR 131 Query: 124 TLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPV 183 +L+ A R + P+ ++ L+ N T S +V L+ Sbjct: 132 AMLKPLLKQADKQTAIRFTSAHPIASVAIDYLKSVAQNAEHIGTASTPIANHIVDLVAMA 191 Query: 184 LHQRESVQPR-----RERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKG 238 + + R R + + V+ I + + L P A +SVR ++R+ + G Sbjct: 192 AGVSTTEEDRARGTLRSQLSRSVIQFIGAHAADPTLTPAKAAQHFKISVRYVHRLLEESG 251 Query: 239 LVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 ++ + RRL+ CAD +R A ++ I F WGF+D SHFS F+ FG+ P +YR Sbjct: 252 ETFSRLLLKRRLERCADDLR-AEAAISISEIAFRWGFNDLSHFSKTFRHHFGVAPRDYR 309 >UniRef50_A5EP12 Transcriptional regulator, AraC family n=3 Tax=Bradyrhizobium RepID=A5EP12_BRASB Length = 315 Score = 217 bits (553), Expect = 4e-55, Method: Composition-based stats. Identities = 71/295 (24%), Positives = 142/295 (48%), Gaps = 5/295 (1%) Query: 4 AVDNEFQQWLSQINQVCGNFT-GRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 + ++ Q+W + +CG F L + G ++ LKL + S ++ T+ Sbjct: 14 SPKSQIQRWSDALTDLCGRFDIDPLEGASFEGRINFTTVSRLKLCQIEASQHRIAHTYAR 73 Query: 63 VKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLP 122 + ++ + +FQ G + EQD RQ++IG GD D S P ++ ++ +++P Sbjct: 74 ARDTEHPYIKILFQTYGVSYFEQDGRQIEIGPGDCLAYDVSSPHTIVSPALTRHDVVIVP 133 Query: 123 RTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPA-LSETESEAALQAMVCLLR 181 + LL++ + + A +L A +++H + + + LS + + ++++ LL Sbjct: 134 KELLQERGFRSEKMPAYKLSARSGTGRIAHDVTHAAFDEATRLSPNSAASVAESLIDLLL 193 Query: 182 PVLHQRESVQPRR--ERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGL 239 L + + + R E + + I +++R+ L + I+ G + R L+ +F+D+G+ Sbjct: 194 LPLREADRMLDRAGPEAVYIRAQAFIREHLRDPDLCIDQISAALGCTKRYLHMVFSDRGM 253 Query: 240 VVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPG 294 V+ YI RL C + + + + F WGFS SHFS VF++ FG+ P Sbjct: 254 TVSDYIWRARLQHCRQEL-ETQSGKTITDVAFSWGFSSSSHFSRVFRKYFGVVPS 307 >UniRef50_Q13VV6 Transcriptional regulator, AraC family n=2 Tax=Proteobacteria RepID=Q13VV6_BURXL Length = 305 Score = 216 bits (550), Expect = 8e-55, Method: Composition-based stats. Identities = 72/300 (24%), Positives = 124/300 (41%), Gaps = 7/300 (2%) Query: 5 VDNEFQQWLSQINQVCGNFTGRL-LTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEV 63 + + W ++ + + + L +L+ V S ++RT + Sbjct: 1 MADRLPYWNEVVSSTFIPSSVQPPRAGEFRASLHNERLGEAELTVVRASPQRVARTSALI 60 Query: 64 KGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPR 123 + S D F + + Q R VQ+ L D++ P L + E L LP Sbjct: 61 RLSSDECLMFGFAPKARWKVSQHGRTVQVAPMQFVLYDSNYPFELEFDEDFDLHVLQLPH 120 Query: 124 TLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRP- 182 L + DA +L L++E + S + +L ++ L Sbjct: 121 ASLAFAGSRLSDVAGRPFDAVSGAGKLLASLIEEVRSGHTSSGVIARTSLGSVAVHLATS 180 Query: 183 ----VLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKG 238 +L R RE + +V + I+ N+ L P IA GMSVR+L+ +F+ + Sbjct: 181 MVSELLELRTDEANERELRLLRVKSYIELNLANPRLDPHAIASANGMSVRTLHGLFSAEE 240 Query: 239 LVVAQYIRNRRLDFCADAIRHA-ADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 L V+ Y+ +RRL C + + +A +AGI WGF + ++FS FK+ FG++P YR Sbjct: 241 LGVSTYVTHRRLLRCKEDLGNAMHSSLSVAGIAMRWGFWNNAYFSRAFKRMFGISPRSYR 300 >UniRef50_B2HDE9 Transcriptional regulatory protein n=1 Tax=Mycobacterium marinum M RepID=B2HDE9_MYCMM Length = 356 Score = 215 bits (549), Expect = 1e-54, Method: Composition-based stats. Identities = 66/304 (21%), Positives = 124/304 (40%), Gaps = 10/304 (3%) Query: 7 NEFQQWLSQINQVCGNFTGRLLT-ERYTGVLDTHFAKGLKLSTVT-TSGVNLSRTWQEVK 64 F+ + I+Q + + G + + ++LS V + V + RT + + Sbjct: 41 ERFEAFQHAISQTFVPLALCVDDVGTFRGQVRSASLGTVQLSDVRVGNDVLVRRTAKLIN 100 Query: 65 GSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRT 124 S + L+G+ ++ QD + + D + D +RP SL + + + + ++ PR Sbjct: 101 HSAPDYLKVAMPLNGKCVVTQDGHEETLAPRDFAVYDTTRPYSLAFSGAYRALVIMFPRD 160 Query: 125 LLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMN-----NPALSETESEAALQAMVCL 179 + + A RL+ + L E N N A + ++A L + Sbjct: 161 QVRLSSAELTRLTARRLNGRDGLGAPVSAFLAEMGNRLDDANTAGTLYLADAVLDMLAAS 220 Query: 180 LRPVLHQRESVQPRRERQ--FQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADK 237 L R + ++ I+ + + L IA +SVR L ++F + Sbjct: 221 FAAQLSDETGGNAARGTRGLALRIRAFIESRLGDPGLDVSTIAAAHHVSVRYLQKLFESQ 280 Query: 238 GLVVAQYIRNRRLDFCADAIR-HAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEY 296 G V +IR+RR++ C + H + ++ I WG + SHFS +FK G +P EY Sbjct: 281 GQTVTGWIRDRRIEHCRRDLEDHRLAEVPVSSIAARWGLVNASHFSRLFKAVHGSSPAEY 340 Query: 297 RRKF 300 R + Sbjct: 341 RAQV 344 >UniRef50_B0KKU7 Transcriptional regulator, AraC family n=10 Tax=Pseudomonas RepID=B0KKU7_PSEPG Length = 314 Score = 214 bits (545), Expect = 3e-54, Method: Composition-based stats. Identities = 77/301 (25%), Positives = 141/301 (46%), Gaps = 11/301 (3%) Query: 9 FQQWLSQINQVCGNFTGRLLTER--YTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGS 66 ++W + + Q+CG F L + + G + T GL L+ + T+ N+ R + Sbjct: 11 LERWTTAMQQICGRFETELASNHSLFIGEVSTFSRAGLPLANLRTNAGNIRRLGENPTLD 70 Query: 67 DDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLL 126 DD + V Q +G + + Q QV + G++ L+D+ C + + +SL L R + Sbjct: 71 DDQHCFLVSQRAGHSTVSQGGLQVSLAPGELLLMDSVGRCEITPSGLIEHVSLALSREQV 130 Query: 127 EQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESE--AALQAMVCLLRPVL 184 +Y P+ ++ + ++ H L+ + + +S ++ A A + LL P Sbjct: 131 RKYVQGSGPMFG-KISSSNACGRMLHVLMDQLCKDGNVSGDGAQGDALQTAFIALLEPGF 189 Query: 185 HQRESVQPRRERQFQK-----VVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGL 239 + V +ID+++ + L P +AG +SVR LYR+F ++G Sbjct: 190 ERNGEAPGNLGALSGANLRGYVQQVIDESLSQPGLTPANLAGRLNISVRHLYRLFEEEGD 249 Query: 240 VVAQYIRNRRLDFCADAIRHA-ADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRR 298 V +YI+ RL AD + + E + I + WGF+D +HFS FK++F +P +YR Sbjct: 250 SVCRYIQRARLMRSADDLANPFFKGESITSIAYKWGFTDSAHFSRSFKKQFERSPKDYRA 309 Query: 299 K 299 + Sbjct: 310 Q 310 >UniRef50_B0V5B3 DNA-binding transcriptional dual regulator n=9 Tax=Acinetobacter RepID=B0V5B3_ACIBY Length = 304 Score = 214 bits (544), Expect = 4e-54, Method: Composition-based stats. Identities = 76/303 (25%), Positives = 138/303 (45%), Gaps = 8/303 (2%) Query: 1 MNPAVDNEFQQWLSQINQVCGNFTGRLLTER--YTGVLDTHFAKGLKLSTVTTSGVNLSR 58 MN V + W I VCGNF R + G + +++ + + + R Sbjct: 1 MNQYVSDALLTWTHHIKNVCGNFETDFDGTRNLFIGEVQCFLLGDTEIAFIKNNANKIVR 60 Query: 59 TWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQIS 118 E+ ++ + + + Q SG+ ++E + + GDI L+D S+Y Q QIS Sbjct: 61 KADEIDRVNNRFCFLILQYSGKMLLEYKNETLSLNEGDIVLVDPVETISMYPQGLVSQIS 120 Query: 119 LLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPAL--SETESEAALQAM 176 + L R L + + + + ++ L + L S N L + + A A+ Sbjct: 121 VHLSREKLLKENISTEYF-GKLITQNMSGFLLKNILKNMSAENIKLWYATEDGNAFEDAL 179 Query: 177 VCLLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFAD 236 + L++P ++ + +K I +N+ + L P+ IA G+S+R LYR+F Sbjct: 180 IALIKPTINYKNVHSSNN--LMEKAERFIIENLAKPDLTPKLIAEHIGVSLRHLYRLFLQ 237 Query: 237 KGLVVAQYIRNRRLDFC-ADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGE 295 + L + +YI+ +RL+ AD + + I WGF D +HFS +FK+ +G++P E Sbjct: 238 ENLSINKYIQLKRLEKVKADLLDKKNKQSSITQIALKWGFWDGAHFSKIFKKTYGISPKE 297 Query: 296 YRR 298 +R Sbjct: 298 FRE 300 >UniRef50_A5EKU9 Transcriptional regulator, AraC family n=2 Tax=Bradyrhizobium RepID=A5EKU9_BRASB Length = 318 Score = 213 bits (543), Expect = 5e-54, Method: Composition-based stats. Identities = 67/299 (22%), Positives = 118/299 (39%), Gaps = 8/299 (2%) Query: 8 EFQQWLSQINQVCGNFT-GRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGS 66 QW + V L + G + S V + + RT Q + + Sbjct: 15 RLAQWQDIVCDVYVGLDCTSDLGSAFRGSVTHTALGRAVCSEVASDRQRVHRTSQRIARA 74 Query: 67 DDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLL 126 D + G + QD R I G+ + D +RP L + + +Q LPR +L Sbjct: 75 DADYVLIALGREGIGGVVQDGRDTVIRPGEFAIYDTTRPYELQFDAAFRQTVFKLPRDML 134 Query: 127 EQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN-PALSETESEAALQAMVCLLRPVLH 185 ++ + + A AD P+ L++ + + +E L+ L Sbjct: 135 QRRIGATEAVTAISFGADSPLQPLAYDFIIRLCERADHIGTEHAERLSDQAADLVAMTLA 194 Query: 186 QRESVQP-----RRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLV 240 +R QP R ++ + ++ + L A E G+S R + +F+D+ L Sbjct: 195 ERLRTQPLPASSHRAALLYRIKAHVRTHLADPDLSLATAARELGLSARYVNDLFSDEQLS 254 Query: 241 VAQYIRNRRLDFCADAI-RHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRR 298 +++ RL C + A ++ I WGF+D SHF VF+ +FG++P E+RR Sbjct: 255 FQRFVLAERLRQCQRDLGMPALAHRHISEIALSWGFNDLSHFGRVFRAQFGLSPREWRR 313 >UniRef50_B8ETQ3 Transcriptional regulator, AraC family n=1 Tax=Methylocella silvestris BL2 RepID=B8ETQ3_METSB Length = 330 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 79/270 (29%), Positives = 129/270 (47%), Gaps = 6/270 (2%) Query: 36 LDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAG 95 L + +LS + +S V L R +E + ++ V LSG ++EQ+ ++V + G Sbjct: 60 LTIYPWDRSRLSVIRSSAVGLRRLPREPLLAGQDAYFVVVLLSGDYVLEQEGKEVVLQPG 119 Query: 96 DITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLL 155 D+T+ DA+RP ++ ++ L +PR LL + + A R+ + ++ R L Sbjct: 120 DMTIYDATRPHKIHCPRDFSKLILAIPRLLLRERMAGVEHCAALRIPGSGGIGSVASRFL 179 Query: 156 QESM-NNPALSETESEAALQAMVCLLRPVLHQRE----SVQPRRERQFQKVVTLIDDNIR 210 Q N + E A V L+ S+ R ++V L+++ + Sbjct: 180 QSCGKNADEFAPNEILALADQAVDLVTLAAASVRPGGFSLSRSRALSMRRVKALVEERLA 239 Query: 211 EEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAAD-DEKLAGI 269 + L IA G+S R L +F D+G + +Y+ +RRL+ CA + L+ I Sbjct: 240 DLELDTAKIARLAGLSARYLNGLFGDEGTSIMRYVWSRRLENCAKDFSDPRRAGDPLSEI 299 Query: 270 GFHWGFSDQSHFSTVFKQRFGMTPGEYRRK 299 F WGFSD SHFS FKQRFG P E+RR+ Sbjct: 300 AFRWGFSDASHFSRAFKQRFGCAPREFRRR 329 >UniRef50_B2IIE7 Transcriptional regulator, AraC family n=1 Tax=Beijerinckia indica subsp. indica ATCC 9039 RepID=B2IIE7_BEII9 Length = 316 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 68/301 (22%), Positives = 129/301 (42%), Gaps = 6/301 (1%) Query: 6 DNEFQQWLSQINQVCGNFTGRLLTE-RYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVK 64 + W + +CG ++ + R + GL+L + TSG ++ + Sbjct: 16 SHSINYWEEALAALCGRLQVEIVGDDRIDAFANYVDFDGLRLCQIKTSGHRVALPRSWLG 75 Query: 65 GSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRT 124 S+ FQ G +I EQ + ++ + GD D ++P + E ++ ++P+ Sbjct: 76 QSEHPVVKVHFQTKGTSIFEQGQTRIVLSPGDCLAYDVAQPHLISSLEYTEHEVAIIPKK 135 Query: 125 LLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPA-LSETESEAALQAMVCLLRPV 183 L + + A + + ++ L ++ + LS + A++ +L Sbjct: 136 SLMERRIAARQFPAVHMSTEHGDIRFVRNFLLSALRQASTLSNKSIKPIADALLDVLIIP 195 Query: 184 LHQ---RESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLV 240 L + + RRE + I N+ + L + IA G S R L+ +F D+G+ Sbjct: 196 LSEGRPQGVSSDRRETLRIRAQDYIRQNLGDTDLTIDRIARALGCSKRYLHMIFMDEGIT 255 Query: 241 VAQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRK 299 V+++I N RLD C ++ A ++ + + WGFS SHFS FK R+G TP ++ Sbjct: 256 VSRFIWNERLDRCFYDLKDAHQSNKTITEVAIEWGFSSPSHFSRSFKDRYGFTPSTALKR 315 Query: 300 F 300 Sbjct: 316 I 316 >UniRef50_C4KLX3 AraC family regulatory protein n=30 Tax=pseudomallei group RepID=C4KLX3_BURPS Length = 319 Score = 212 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 73/297 (24%), Positives = 130/297 (43%), Gaps = 7/297 (2%) Query: 10 QQWLSQINQVCGNFTGRLLTER-YTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDD 68 + W + Q G + + L + +++ T+ + R + Sbjct: 19 RAWGRVVTQYFGGLDACCDGDDAFDAQLSQYEIGPMRVFTIAAPAHRIVRPVAALHDHGS 78 Query: 69 AWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPR-TLLE 127 +F + QLSG + +EQ + ++ +GD +L D P S+ +Q+++ +PR L Sbjct: 79 DFFKLILQLSGVSEIEQRGKTFRLHSGDWSLYDPRVPYSIANLTHVEQLAIQIPRKQLGG 138 Query: 128 QYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPVLHQR 187 P + LS L+ S P+L T A + ++ L+ L + Sbjct: 139 FAVPDLHTSDVREFELKGLFSLLSSFLVSLSEQLPSLPGTTGTALSETILGLIVSTLTAQ 198 Query: 188 ESVQPRRERQ----FQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQ 243 Q +V I ++ + L + IA E S R L+R+F ++G+ + + Sbjct: 199 RDAQGEHVALPAVLRMRVKQYIHGHLADADLSIDRIARELRCSKRYLHRIFEEEGVTIDR 258 Query: 244 YIRNRRLDFCADAIRHAADDEK-LAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRK 299 YI + RL+ C DA+ +A + ++ I F WGFS +HF FKQR+GMTP E+ R+ Sbjct: 259 YIWSSRLERCKDALDNARAAKPAISEIAFSWGFSSSAHFCRSFKQRYGMTPREFVRR 315 >UniRef50_C5ALA2 Transcriptional regulator, AraC family protein n=1 Tax=Burkholderia glumae BGR1 RepID=C5ALA2_BURGB Length = 344 Score = 211 bits (538), Expect = 2e-53, Method: Composition-based stats. Identities = 70/306 (22%), Positives = 126/306 (41%), Gaps = 10/306 (3%) Query: 4 AVDNEFQQWLSQINQVCG-NFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 V + F W ++ + + + + G L + + L TS R+ Sbjct: 10 PVSDRFAIWREALSNIFDVSLHQTAPGDTFFGSLTAYHLGPVLLGECRTSAQRYLRSPVM 69 Query: 63 VKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLP 122 ++ D + +SG+ + + +++LD SRP I+LL+P Sbjct: 70 IRRDDIDHYLIQLYISGEIHGLYGSKPTHLTPMTLSVLDMSRPVD-SLGTPLHNINLLIP 128 Query: 123 RTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN-PALSETESEAALQAMVCLLR 181 R LL + +D L+ L P L ++ A + V L+ Sbjct: 129 RDLLAPLIAQPNHMHGRIWTSDAATTALAASHLVTLFRLVPTLDSSQLSAVVDVTVNLIA 188 Query: 182 PVL----HQRESVQPRRER-QFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFAD 236 L RE++ P+R+ + V I +IR+ L P ++ G+S LYR+F Sbjct: 189 ICLGSGEQAREALLPQRDAISLRMVRRYIRRHIRDMTLSPASLSTALGISRSRLYRLFKG 248 Query: 237 KGLVVAQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGE 295 +G V +YIR+ R+ I + ++ I + GF++++HFS F+++FGM+P E Sbjct: 249 EGG-VHEYIRSSRMRLALKEISDSKYHHRRIGDIAYEIGFTNEAHFSRSFREKFGMSPKE 307 Query: 296 YRRKFR 301 R R Sbjct: 308 AREGAR 313 >UniRef50_C1AVG9 Putative AraC family transcriptional regulator n=1 Tax=Rhodococcus opacus B4 RepID=C1AVG9_RHOOB Length = 326 Score = 210 bits (536), Expect = 4e-53, Method: Composition-based stats. Identities = 66/299 (22%), Positives = 121/299 (40%), Gaps = 11/299 (3%) Query: 10 QQWLSQINQVCGNFTG--RLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSD 67 + W + + + R+ L T L LSTV ++ RT + +D Sbjct: 30 EWWTDALAETYCEMDPQWESRSGRFEARLSTRQFGDLSLSTVRAHAHSVLRTPAMIGDTD 89 Query: 68 DAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLE 127 ++ G +EQ +R + + G ++DA +P + + +QI + +PR LL Sbjct: 90 SEDYFLCAVTGGPGRIEQHDRSIWLDKGSFAVIDAGQPFRFDFPQRFEQIVVRVPRPLLL 149 Query: 128 QYF--PHQKPICAERLDADLPMVQLSHRLLQESMN-----NPALSETESEAALQAMVCLL 180 + A+ + A + R LQ+ A + S +AL +V L Sbjct: 150 GRMSERDVDRVMAQPVSAASGAGVVVSRFLQQLAALDAAVPDAPAAALSASALDMIVTAL 209 Query: 181 RPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLV 240 Q + L+ + +E L A E G+S+R L ++F G Sbjct: 210 ADTGGTVSPTQQAHTADLHRAQNLLKTRLHDENLSITEAAAELGISLRYLQKIFQSTGST 269 Query: 241 VAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRK 299 ++++ + RL+ + + D + + GF D SHFS F+ +G++PG+YRR+ Sbjct: 270 PSEWLLHARLERARMILL--STDITIGDLASRVGFKDISHFSRSFRTLYGISPGQYRRR 326 >UniRef50_B9JQ03 AraC-type DNA-binding domain-containing protein n=3 Tax=Agrobacterium radiobacter K84 RepID=B9JQ03_AGRRK Length = 302 Score = 210 bits (535), Expect = 4e-53, Method: Composition-based stats. Identities = 68/300 (22%), Positives = 117/300 (39%), Gaps = 2/300 (0%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEV 63 A + W Q+ + T+ + G + LS V ++ RT + + Sbjct: 3 ARSDTLSLWKEQLWSTYVRLESKAETDGFYGAVQEFLPHSHSLSLVDSTAQLTERTRRHI 62 Query: 64 KGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPR 123 + FQLSG ++ QDERQ + G+ L ++ RP SL + KQ+ L + R Sbjct: 63 RADQQEVVLVAFQLSGCGLVVQDERQARTAPGEFVLYESMRPYSLGFDGPFKQLVLRVDR 122 Query: 124 TLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPA-LSETESEAALQAMVCLLRP 182 + P + A DA ++ LQ + + E + L+ Sbjct: 123 ERMISTMPCIGNMTARTFDAKQGAGAVALDFLQSLAARGSQIDEGSLSPMERTAFDLVAT 182 Query: 183 VLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVA 242 + R F+++ + + +R+ +A GMS RSL R+ A+ G+ Sbjct: 183 GVLSSTGDLSPRRVLFERLRDRLIEKVRDPSFNQTDMAVLAGMSPRSLRRLCAENGISPG 242 Query: 243 QYIRNRRLDFCADA-IRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKFR 301 I RL D+ + I WGF+D S+F+ F+ +GMTP + R + Sbjct: 243 GLILRTRLQGATDSFALDINKRRSVTEIALSWGFNDISYFNRAFRTTYGMTPRQMRHSHQ 302 >UniRef50_A6W2J9 Helix-turn-helix-domain containing protein AraC type n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W2J9_MARMS Length = 299 Score = 210 bits (535), Expect = 5e-53, Method: Composition-based stats. Identities = 71/300 (23%), Positives = 133/300 (44%), Gaps = 11/300 (3%) Query: 8 EFQQWLSQINQVCGNFTGRLLTE-RYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGS 66 + W+ ++ +CGNF + G + GL ++ + T+ + R+ Sbjct: 3 DLDHWVHSVHSICGNFDTHPHPNIPFIGNMRLDDHNGLGVAHIETNAEKIVRSKST--SQ 60 Query: 67 DDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLL 126 DD ++ + Q G + + + G+I L+D+S P ++ Q +Q+S+ LPR + Sbjct: 61 DDKHYFVILQKKGVMGFSWSDNKDLLLPGEIALIDSSLPYDMHPQGLIQQMSVHLPRAYI 120 Query: 127 EQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALS---ETESEAALQAMVCLLRPV 183 + FP ++ Q+ +L + N + + + +A A+ L++P Sbjct: 121 DSLFPSHAQHRITKIAQSRSSSQMLLIMLHQLANTDCQNPYFQEDGDALKCAISALIKPS 180 Query: 184 LHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQ 243 L + ++ I + EE L P IA E +S RSLYR+F++ L VA Sbjct: 181 LENMNHDSAFSMK--ERAKQHILRLLNEENLSPGHIAKEMNISKRSLYRLFSEDNLSVAH 238 Query: 244 YIRNRRLDFCADAIRHA---ADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKF 300 +I R++ C + A + + + WGFSD S FS FK+ G++P ++R+ Sbjct: 239 FILQMRIEKCCTDMLSADAAKRPLSITEVAYRWGFSDASQFSRAFKRIKGISPSQWRQSL 298 >UniRef50_B2IIZ5 Transcriptional regulator, AraC family n=1 Tax=Beijerinckia indica subsp. indica ATCC 9039 RepID=B2IIZ5_BEII9 Length = 317 Score = 210 bits (534), Expect = 6e-53, Method: Composition-based stats. Identities = 62/292 (21%), Positives = 123/292 (42%), Gaps = 11/292 (3%) Query: 8 EFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSD 67 +W + G R+ + G++L ++ N R+ E+ Sbjct: 25 NLVEWRVKPQTHGGPIVARIRPH--------CLSGGVRLIELSGGPFNGERSRAEIARDG 76 Query: 68 DAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLE 127 D + +FQ SG + + + + +G G++ + + RP +++ LL+P + E Sbjct: 77 DEYLGVLFQRSGSTLCKVGDSRTLVGPGEVCVWLSERPTEFEMPSQFQKLCLLIPLSRFE 136 Query: 128 QYFPHQKPICAERLDADLPMVQLSHRLLQESMNN-PALSETESEAALQAMVCLLRPVLHQ 186 + L + + L L A + S A+ + LL Sbjct: 137 SVLHNATAYEGLHLPTNNHLTTLLGSYLTTLSEEVAAGPDGGSSEAVDVTLELLGAAFRV 196 Query: 187 RESVQPRRE--RQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQY 244 +S + + +++ I+ + + L P IA G+S+R LY +F+++G+ VA + Sbjct: 197 YQSQFDHQPHYQLRSRILRYIEARLDDASLTPLKIAKGNGISLRYLYLVFSEQGMTVAGW 256 Query: 245 IRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEY 296 +R RRL C + + + + + + WGF+D +HFS +FK FG++P Y Sbjct: 257 VRQRRLARCRAELDDVQNTKTITEVAYRWGFNDSAHFSRLFKSSFGVSPSAY 308 >UniRef50_C8Q6A0 Transcriptional regulator, AraC family n=1 Tax=Pantoea sp. At-9b RepID=C8Q6A0_9ENTR Length = 314 Score = 209 bits (533), Expect = 8e-53, Method: Composition-based stats. Identities = 60/299 (20%), Positives = 113/299 (37%), Gaps = 5/299 (1%) Query: 6 DNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKG 65 + W I++ + GV+ + L+LS V+ S N+ R + Sbjct: 12 AERSEYWRHAISRTFVPLESTFSGDDRYGVIRSGNWGDLRLSEVSCSAQNVIRCRRGADN 71 Query: 66 SDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTL 125 D F G+ + Q +G G+ L D P L+ ++Q + +P Sbjct: 72 HPDNAMLLSFISQGKTSVIQAGSHACLGQGEFGLYDTRFPYELHLHGETRQHVVQIPIEH 131 Query: 126 LEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPVLH 185 L + + + A + + LL M P + L L V+ Sbjct: 132 LRKEMGKTEHLVAYSFGRKHSLTPFLYVLLNNLMAQPEDIAYRHTSVLYRQFLELLTVIV 191 Query: 186 QRESVQPRRER----QFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVV 241 E + R R +V +ID + + L +A +S R L + G Sbjct: 192 SDECIAKRSSRSSAGLLLQVKIMIDRQLSDTTLSVSSVAESFRISPRYLSMLLKGDGTTF 251 Query: 242 AQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRK 299 +Y+ +RL+ + A++ + ++ I + GF+D ++FS F+++F +P EYR + Sbjct: 252 GRYVLTQRLNKASLALQSPLYSNIPISQIAWELGFNDMAYFSRAFRKKFSCSPTEYRHQ 310 >UniRef50_Q1H4B9 Transcriptional regulator, AraC family n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H4B9_METFK Length = 327 Score = 209 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 72/271 (26%), Positives = 130/271 (47%), Gaps = 6/271 (2%) Query: 35 VLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGA 94 + + + ++LST+ ++G+ + R E + + ++ V LSGQ ++EQ R+V + Sbjct: 52 EMTIYPWQDMRLSTIRSNGITIQRQRGECRNASQDAYFAVILLSGQYLLEQHGREVFLQP 111 Query: 95 GDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRL 154 G++ L DA+ P ++ ++ + +PR LL + + A R+ +L M + Sbjct: 112 GEMALYDATSPHRIHCPGPFSKLIVSIPRALLRSHLAGVEHCTARRISPELGMSAIGTHF 171 Query: 155 LQESMNNPALSETESEAALQAMVCLLRPVLHQRESVQ-----PRRERQFQKVVTLIDDNI 209 ++ + + +L L R +V I++++ Sbjct: 172 IRSAAQHANSLNLPQFNSLAPQALALLAASLASARPDHIHYGRSRSASLHRVRQFIEEHL 231 Query: 210 REEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAADD-EKLAG 268 + L IA TG+S R + +FAD+GL + +Y+ RRL+ C +R A + +A Sbjct: 232 HDHDLDSSLIAAATGLSARYINSLFADEGLSLMRYVWQRRLEKCRQTLRQPAQHGQAIAT 291 Query: 269 IGFHWGFSDQSHFSTVFKQRFGMTPGEYRRK 299 I FHWGF DQ+HFS FKQ FG++P YR + Sbjct: 292 IAFHWGFIDQAHFSRSFKQAFGVSPRAYRAQ 322 >UniRef50_A9D6L8 Helix-turn-helix, AraC type n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D6L8_9RHIZ Length = 336 Score = 209 bits (531), Expect = 1e-52, Method: Composition-based stats. Identities = 71/299 (23%), Positives = 122/299 (40%), Gaps = 7/299 (2%) Query: 6 DNEFQQWLSQINQVCGNFTGRLL-TERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVK 64 + F W + + +TG + + + S V+ S + R +++ Sbjct: 20 RDRFAYWREAVCDTYVQLECMSDNSTDFTGEIQLNRMPRVSTSIVSGSQQLVRRRRRDIA 79 Query: 65 GSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRT 124 + D WF QL +++Q R ++G GD L + P L + +Q+ + +PR Sbjct: 80 KATDEWFLLSIQLERHGLIQQCGRIAELGLGDFALYSSIDPYDLSLPDGFRQLVVQIPRH 139 Query: 125 LLEQYFPHQKPICAERLDADLPMVQLSH----RLLQ-ESMNNPALSETESEAALQAMVCL 179 L Q P+ + + + L RL+Q +S NPA ++ + Sbjct: 140 DLLQRLPNADLLTGMTVRGKSEIGGLVRDSVFRLVQAQSAVNPATRHCLEDSIIDLCATG 199 Query: 180 LRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGL 239 L + R + T+I I + L IA +SVR L +F +G Sbjct: 200 LTTLHGAEAVRTATEHRLIHQADTIIAQRIGDPYLDRAEIAAALSVSVRRLSEVFQAEGT 259 Query: 240 VVAQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 VA IR RL A +R+ ++ I WG ++ HFS +F++RFG++P EYR Sbjct: 260 SVASKIRQLRLAGIASDLRNPQFAGWTISAIAMRWGLNNLQHFSRIFRERFGVSPREYR 318 >UniRef50_A0NZA7 Probable transcriptional regulator n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NZA7_9RHOB Length = 312 Score = 208 bits (530), Expect = 2e-52, Method: Composition-based stats. Identities = 73/297 (24%), Positives = 133/297 (44%), Gaps = 5/297 (1%) Query: 8 EFQQWLSQINQVCGNFTGRLL-TERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGS 66 +F+ W +++ ++ R T + + G+++ + SR E++ S Sbjct: 16 QFEAWRHALSRTHLDWDLRPSETSEFHADIRERILDGIRVVECSCDPCEGSRRKPELRHS 75 Query: 67 DDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLL 126 D+A+F +F+LSG I+ Q +RQ ++ AGD L D+ R +++LL+P+ Sbjct: 76 DEAYFGVLFELSGHEIIRQGDRQAELSAGDFVLWDSEREMDFKVTSRLHKLTLLIPKFRA 135 Query: 127 EQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN-PALSETESEAALQAMVCLLRPVLH 185 ++ + + + +S L+ + + E ++EA +Q ++ LL L Sbjct: 136 KRLEWDVERFAGTVVKNLSAVSGISAEALRRLARDFTTIEEKDAEAVMQPILSLLMATLT 195 Query: 186 QRE---SVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVA 242 R+ S F I +N+ + L P +A G+S+R L+ +FA Sbjct: 196 TRQEPASASMAHRDHFSAFCRFIRNNLEDGRLDPRTVAEAHGVSLRYLHTVFAHNNDTCC 255 Query: 243 QYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRK 299 ++R RL C + + + I F WGF+D +HFS FK FG+ P RRK Sbjct: 256 NFMRRERLRRCHADLARPHCRDTITEIAFRWGFNDAAHFSRAFKAEFGIAPKTLRRK 312 >UniRef50_D0XME9 Transcriptional regulator, AraC family n=1 Tax=Brevundimonas subvibrioides ATCC 15264 RepID=D0XME9_9CAUL Length = 317 Score = 208 bits (529), Expect = 2e-52, Method: Composition-based stats. Identities = 65/304 (21%), Positives = 117/304 (38%), Gaps = 8/304 (2%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLLTER-YTGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 + W + + + L + L+ + ++ RT Sbjct: 10 PAARRSEAWNKLYSSHLNHVDFIPADRSHFNAELSMSRLGPIGLARMAADSSSIERTRHH 69 Query: 63 VKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLP 122 + + V Q G+ + + ++ AGD TL D+S P ++S+ + L +P Sbjct: 70 ITVGSPRLYTFVLQTRGEGELSHCGHEARLEAGDFTLCDSSAPHFFRVNDNSEVLMLRVP 129 Query: 123 RTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPAL------SETESEAALQAM 176 L Y P + C + L ++ + + +++ + L + + L+ M Sbjct: 130 AETLRVYVPSPEVFCGQLLKGNVGLTGTAAAMIRSLASQAELGIPSPYDQRVARNLLEVM 189 Query: 177 VCLLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFAD 236 + + +V I+ N+R+ L P IA +S R L +FA Sbjct: 190 ATSYALAFDDQIQGSSVVRGRQACIVRHIEANLRDPGLSPASIAAALRISPRYLRLVFAT 249 Query: 237 KGLVVAQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGE 295 V+ YI RRL+ CA I+ L + F WGF+ SHF+ F+ RFG+ P + Sbjct: 250 GNETVSGYILRRRLEECARQIQEPGWTGHTLTEVAFSWGFNSSSHFARSFRDRFGVPPRQ 309 Query: 296 YRRK 299 YRR Sbjct: 310 YRRS 313 >UniRef50_C3PKW7 Transcription regulator, AraC family n=2 Tax=Corynebacterium RepID=C3PKW7_CORA7 Length = 306 Score = 208 bits (529), Expect = 2e-52, Method: Composition-based stats. Identities = 66/303 (21%), Positives = 129/303 (42%), Gaps = 8/303 (2%) Query: 1 MNPAVDNEFQ--QWLSQINQVCGNFTGRLLT-ERYTGVLDTHFAKGLKLSTVTTSGVNLS 57 M+ + +F W + ++ G + L + + L + TS ++ Sbjct: 1 MSASAVEQFDIASWRTASSESFGQLDVDAEDPSSFHATLRSTKVGDISLFDMCTSPHTVN 60 Query: 58 RTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQI 117 R+ + + + Q++G + M QD R ++ GD+ L RP +L++ E + Sbjct: 61 RSK--IATDETPFCKLSLQITGSSTMSQDGRTCELRPGDLALYVTQRPYTLHYPEEQNTL 118 Query: 118 SLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN-PALSETESEAALQAM 176 + P++ L+ + + A + + ++ L ++ N L + A +++ Sbjct: 119 IVHFPQSFLDISPAQIQRLTANPISRSHGLGAVAVPLFEQLAENLDLLKGPHATALVRSA 178 Query: 177 VCLLRPVLHQRESVQPRRERQ-FQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFA 235 + +L VL + +P F + I+ ++ + L P IA +SVR L+ F+ Sbjct: 179 LTMLVSVLASDVADEPSAGTLLFNQATAYIEQHLGDSDLGPSTIAQALFVSVRHLHAKFS 238 Query: 236 DKGLVVAQYIRNRRLDFCADAIRHA-ADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPG 294 ++GL V YIR RRL+ + +E ++ I +G D SH S +FK F P Sbjct: 239 EQGLSVGSYIRTRRLEHIRRELVDPRHSEESISHISARYGLHDPSHLSRIFKAEFHKPPS 298 Query: 295 EYR 297 YR Sbjct: 299 AYR 301 >UniRef50_Q0SJU4 Transcriptional regulator, AraC family protein n=2 Tax=Rhodococcus jostii RHA1 RepID=Q0SJU4_RHOSR Length = 348 Score = 208 bits (529), Expect = 2e-52, Method: Composition-based stats. Identities = 64/297 (21%), Positives = 108/297 (36%), Gaps = 6/297 (2%) Query: 11 QWLSQINQVCGNFTGRLL-TERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDA 69 W+ I +TG + T L + VT + + RT + Sbjct: 52 TWIDTIRDTFVALDIDPAEPTHFTGAVHTRHFAHLMAADVTATSQSFRRTARLADRHPLD 111 Query: 70 WFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQY 129 ++G+ + QD R +G GD L + SRP + PR + Sbjct: 112 LMQIGMVVAGEGQLIQDGRTCILGPGDFALYETSRPFTWNLHPDWHLRVFTWPRASVSLT 171 Query: 130 FPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPVLHQRES 189 + + A + + P+ QL +L + + L + L Q E Sbjct: 172 ESQSQQLTARTVSSTSPVGQLLSPMLSRLLVADGEVSSGGAIGLAGGLADLAITAAQEEC 231 Query: 190 VQPRRERQFQKV----VTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYI 245 + +++ V I ++ + L P IA +S R+++R+FA A I Sbjct: 232 QPDDPDAAMRELYANMVQYIGQHLDDPDLSPSGIAKAFFVSTRTVHRVFARFDATAAATI 291 Query: 246 RNRRLDFCADAIRHAAD-DEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKFR 301 R RL+ C A+ + L I +GF D S FS F +G++P YR + R Sbjct: 292 REHRLEACRQAMVSPRNIPRSLTDIAAQFGFIDLSVFSRAFTATYGISPSRYREQHR 348 >UniRef50_Q140Z5 Transcriptional regulator, AraC family n=2 Tax=Burkholderiales RepID=Q140Z5_BURXL Length = 336 Score = 208 bits (529), Expect = 2e-52, Method: Composition-based stats. Identities = 61/301 (20%), Positives = 130/301 (43%), Gaps = 6/301 (1%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRL-LTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 + + W S ++ + L + + H G ++ RT Sbjct: 25 PLGDRTDAWESVLSTSYREWQVPHRLPATFYAHVKQHDFAGAEIVETVCDPCMGQRTAGH 84 Query: 63 VKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLP 122 V+ D+ + +G+ + V++ +GD+ + + E +++L++P Sbjct: 85 VRHDDELYVGVQLTTAGRERFRIGDAGVEVASGDVVVWTTGQAVEFEVLERLHKVTLMIP 144 Query: 123 RTLLEQYFPHQK-PICAERLDADLPMVQLSH-RLLQESMNNPALSETESEAALQAMVCLL 180 +++ + P +K P ++++ + + L LL S L E+ + ++ + LL Sbjct: 145 WSVMRERLPERKQPPTGGKIESRMGVGSLLAVHLLALSNEIATLDESVQGSVNRSTLELL 204 Query: 181 RPVLHQRESVQ--PRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKG 238 L ++ ++V I ++ E+ L P IA +S+R L+ +F Sbjct: 205 GIALSGQQPCATFDASVAMLRRVQDFILQHLHEDDLNPTRIAEANHISLRYLHMLFQRSD 264 Query: 239 LVVAQYIRNRRLDFCADAIRHAADDE-KLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 + V+ +I +RRL C A+ A + +++ I F WGF+ SHF F++++G +PG+ R Sbjct: 265 MTVSGWILDRRLHACKQALMDPAYNRQRISEIAFRWGFNSTSHFCRAFREKYGASPGDVR 324 Query: 298 R 298 R Sbjct: 325 R 325 >UniRef50_A5W3Z7 Transcriptional regulator, AraC family n=5 Tax=Pseudomonadales RepID=A5W3Z7_PSEP1 Length = 313 Score = 207 bits (528), Expect = 3e-52, Method: Composition-based stats. Identities = 71/302 (23%), Positives = 130/302 (43%), Gaps = 6/302 (1%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLLTER-YTGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 + F W + + C + + ++ + G L + L ++T+++ + R+ Q Sbjct: 13 SPSRRFDYWREVVCRHCLSADSKPSSQSNFEGALQVNGIGPLDVTTLSSPLHHWVRSEQH 72 Query: 63 VKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLP 122 ++ + L G +EQ R+ ++ AG++ L DA++P + + + +P Sbjct: 73 LRSDPAEDIWLGVTLDGYGEIEQHNRKARLTAGNVFLYDATQPFRFSLGGTENHL-IRIP 131 Query: 123 RTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETE--SEAALQAMVCLL 180 R LL Q PH I A L+ P V +++ ++ ++ L + E S +V LL Sbjct: 132 RPLLAQRVPHIADITALVLEEGRPGVIPLRQMIGQAASSAPLLQDEGVSRRYSNTIVDLL 191 Query: 181 RPVLHQRESVQPRRERQFQ-KVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGL 239 L ++ RE +++ I ++ E L E IA +S R++ R FA Sbjct: 192 VLSLELQDLKTTHRELDLYGRIMNYIQRHLTEPELSIESIALAHHVSTRTVTRAFARHQK 251 Query: 240 VVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRK 299 I RL+ AI ++ +GFSD SHFS F++ FG+ P R+ Sbjct: 252 SPVAEIWKERLNASRAAI-ECGQVRSVSQAALEYGFSDFSHFSHAFRKAFGVAPHSLLRR 310 Query: 300 FR 301 R Sbjct: 311 SR 312 >UniRef50_C8QGB6 Transcriptional regulator, AraC family n=2 Tax=Enterobacteriaceae RepID=C8QGB6_9ENTR Length = 327 Score = 207 bits (528), Expect = 3e-52, Method: Composition-based stats. Identities = 61/301 (20%), Positives = 122/301 (40%), Gaps = 5/301 (1%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEV 63 A F+ W I + C G+ L+ + G L + + T++ S R + + Sbjct: 18 AEPQRFEYWNDVILRHCIPSDGKPLSGTFDGELGVREVGLVDICTLSASTHYWERKAKHL 77 Query: 64 KGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPR 123 + + + G +EQ R+ + + ++ L DA++ + + + +PR Sbjct: 78 RTGPEDDLWLGCFQGGYGQLEQGGRKANLTSTNLVLYDAAQTFRFSIGGYNNHL-IRIPR 136 Query: 124 TLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPAL---SETESEAALQAMVCLL 180 LL P + + A LD P + ++ +++ +P L + + + L+ Sbjct: 137 HLLCGKLPGAESMTATVLDESRPGIIPLREMIYQAVQSPELFSHPQLAGRFSQTLLDLLV 196 Query: 181 RPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLV 240 + Q + + ++ I ++ + L E IA +SVR++ R FA Sbjct: 197 LSLELQTPEKEHVERDLYARIRNYIRRHLTDPALNLESIALAHHVSVRTVTRAFARHQKT 256 Query: 241 VAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKF 300 I RL+ +A+ ++ +GFSD SHFS F++ FG+TP ++ Sbjct: 257 PVAIIWQERLEASREALVQGRVA-SVSQAAMDYGFSDFSHFSHAFRKAFGVTPHSVMKQH 315 Query: 301 R 301 R Sbjct: 316 R 316 >UniRef50_B4UYA5 AraC family regulatory protein n=1 Tax=Streptomyces sp. Mg1 RepID=B4UYA5_9ACTO Length = 330 Score = 207 bits (526), Expect = 5e-52, Method: Composition-based stats. Identities = 74/308 (24%), Positives = 130/308 (42%), Gaps = 13/308 (4%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLLTE-RYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 ++ F+ W ++Q G + G ++ +++T++ +G+ RT + Sbjct: 12 PTEDRFEWWREVVSQGAGATDVTSEDRAGFAGSMEVLSLGAARIATLSYAGLRSQRTARL 71 Query: 63 VKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYW----QESSKQIS 118 ++ SD + L G + Q ++ + GD + +S P S++ + Sbjct: 72 IRRSDPETYELTLLLGGTMGVSQARQETLLRPGDFNVWSSSLPYDSQSAGEPDGSARAVV 131 Query: 119 LLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVC 178 L LPR+ L + A L + + + R L + + E L M Sbjct: 132 LHLPRSFLPLPGAKVDRLLAHGLPSGSGVAAVFARHLTSVVREAQSLTSVDEERLGVMTW 191 Query: 179 LLRPVL-------HQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLY 231 L R R + +++ I+DN+ + L P IA +SVR L+ Sbjct: 192 DLATAFVAHHVDAADRLPPHTRHQLLLKRLDLFIEDNLADPALSPRQIADRHHISVRLLH 251 Query: 232 RMFADKGLVVAQYIRNRRLDFC-ADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFG 290 R+FAD+ V+Q IR RRL+ C AD + + +G WGF+D + FS F+ +G Sbjct: 252 RLFADRKETVSQTIRRRRLERCSADLVDPRLRALPVHEVGRRWGFTDAAGFSRTFRGAYG 311 Query: 291 MTPGEYRR 298 TPGE+RR Sbjct: 312 WTPGEHRR 319 >UniRef50_A1RDF3 Transcriptional regulator, AraC family n=1 Tax=Arthrobacter aurescens TC1 RepID=A1RDF3_ARTAT Length = 321 Score = 207 bits (526), Expect = 5e-52, Method: Composition-based stats. Identities = 69/304 (22%), Positives = 126/304 (41%), Gaps = 7/304 (2%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEV 63 A + + + +++ + E + GV+ + V + ++SRT ++ Sbjct: 13 ATSTDIRHYAHLVSERFAPLSLSTDREAFHGVIHGRTLGPVYAFDVQANQHSVSRTARDA 72 Query: 64 KGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPR 123 S + QL+G+ + Q R ++G GD+ D+ + + + L+ PR Sbjct: 73 AASPRETYQAHVQLAGRGHIVQGGRGTELGPGDVAFYDSDAAYGVTVDDDFHHLILVFPR 132 Query: 124 TLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPV 183 L + A RL D L+Q + + + + V +L Sbjct: 133 MALGVPADGAAQLAATRLGGDGAAGLARSFLVQLARTLESAPGYVRTRLVHSAVDMLGIA 192 Query: 184 LHQR------ESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADK 237 L + ++ +P R R + + I+D++ E L P IA +SVR L+ FAD Sbjct: 193 LLEELGHSPVDTGRPSRARVHAEALAYIEDHLHEPDLAPGQIAAALFVSVRHLHAAFADT 252 Query: 238 GLVVAQYIRNRRLDFCADA-IRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEY 296 G V+ IR RRL+ CA + L+ I G+ D +HFS +FK +G +P ++ Sbjct: 253 GQTVSGRIRERRLEHCARDFVDPLLAHIPLSRIAAGHGYLDMAHFSRLFKCTYGQSPRDF 312 Query: 297 RRKF 300 R + Sbjct: 313 RATY 316 >UniRef50_Q9S2C6 Putative regulatory protein n=3 Tax=Streptomyces RepID=Q9S2C6_STRCO Length = 334 Score = 207 bits (526), Expect = 5e-52, Method: Composition-based stats. Identities = 64/292 (21%), Positives = 125/292 (42%), Gaps = 7/292 (2%) Query: 17 NQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQ 76 + V + R E + + L++ + + V + RT + + ++ + Q Sbjct: 26 SVVAVDIDHRPPAEDLSVRIGLGTVGPLRICSARATAVTIRRTERLAREDEEPAVFLGLQ 85 Query: 77 LSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPI 136 ++G +++ Q+ R+ +G G + ++ P +L + E L PR+ L + Sbjct: 86 VTGTSLVAQNGRECVLGPGQFAVYESIAPYTLLFDEGVDHHFLRFPRSALALPDRLLRDT 145 Query: 137 CAERLDADLPMVQLSHRLLQESMNNPALSE-TESEAALQAMVCLLRPVLHQRESVQ---- 191 + L P +L+ + + L + ++A ++ V LLR VL + Sbjct: 146 SSVTLGPGNPTARLAFTYFSQLAASDELHQGVHADAVVEPSVELLRAVLTTQHGDPGLAK 205 Query: 192 -PRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRL 250 P ++ I ++ + L IA +SVR LY + + G+ + +IR+ RL Sbjct: 206 GPLESTLGLRITQYIRAHLADPDLSAARIAAAHDISVRHLYTVLSGLGISLGDWIRSHRL 265 Query: 251 DFCADAIRHAADD-EKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKFR 301 C + +A IG WGF + +HFS VFKQ +G++P +R + R Sbjct: 266 AECRRELSGPNSRLRTIAAIGRRWGFVNATHFSKVFKQAYGLSPRAWRDQNR 317 >UniRef50_B1LSU0 Transcriptional regulator, AraC family n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1LSU0_METRJ Length = 322 Score = 206 bits (525), Expect = 6e-52, Method: Composition-based stats. Identities = 68/305 (22%), Positives = 122/305 (40%), Gaps = 9/305 (2%) Query: 5 VDNEFQQWLSQINQVCGNFT-GRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEV 63 + F+ W I + + G L+ L ++ VT S V T + Sbjct: 12 PKDSFRLWRETIFERIVPVELTPATAHAFAGTLEAAEVGPLLITRVTQSAVTTVATPDTI 71 Query: 64 KGSDD-AWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLP 122 + L G+ QD+R GDI ++D RP ++ ++ + + LP Sbjct: 72 RRHGKYETLNVAITLKGRVYSAQDDRTAIQNPGDIVVMD-RRPATMASDVDTQTLFVELP 130 Query: 123 RTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN-----PALSETESEAALQAMV 177 R LE+ + + + AD + QE + N P +S + + +V Sbjct: 131 RESLERALGSTRRFTSLTIGADQVGTSMVTTFFQELVRNAGRLTPDMSNRMASVGVDLIV 190 Query: 178 CLLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADK 237 + L + FQ+ + I+ ++ + L P +A G+S+R L +F ++ Sbjct: 191 ASIAERLAHDTPKNIQGVLIFQRALAHIEAHLGDLNLDPARLAAAVGVSLRHLQALFREQ 250 Query: 238 GLVVAQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEY 296 +A +I RRL+ A + + + + GF QSHFS FK +G++P EY Sbjct: 251 DRNIADWIWRRRLEIAAQRLADPGFAHLAVGELAYSCGFCTQSHFSRRFKDSYGISPSEY 310 Query: 297 RRKFR 301 R + R Sbjct: 311 RWRNR 315 >UniRef50_B0T8Y9 Transcriptional regulator, AraC family n=1 Tax=Caulobacter sp. K31 RepID=B0T8Y9_CAUSK Length = 339 Score = 206 bits (525), Expect = 7e-52, Method: Composition-based stats. Identities = 66/302 (21%), Positives = 118/302 (39%), Gaps = 17/302 (5%) Query: 13 LSQINQVCGNFTGRLLT--------ERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVK 64 S + + G F GR+ E +T L L L+ + + + R + Sbjct: 12 RSSLVEWAGLFAGRIEAMDFKPSRPETFTAQLAGSDLGPLHLARLACAKTTIERGEGHLA 71 Query: 65 GSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRT 124 ++ + + G + + + GD L D++ P + + + ++ + L + + Sbjct: 72 HKTSPAYFLMLLIGGSGEISHYGNTITLEEGDFVLCDSTAPLKIAFPDDAEALFLKVGAS 131 Query: 125 LLEQYFPHQKPICAERLDADLPMVQLSHRL-------LQESMNNPALSETESEAALQAMV 177 L+++ P + C L AD + + + L+ + P + L + Sbjct: 132 TLKEHLPSPECFCGRALRADEGLTATAGAMALNLFGRLEAGLALPYQDRV-ARHLLDILA 190 Query: 178 CLLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADK 237 S + V I+ ++R+ L P IA +S R L +FA + Sbjct: 191 MAYALAFDTPTSRSSIVSGRCATVKLFIEQHLRDPDLTPCSIAARMKLSSRYLRMIFASE 250 Query: 238 GLVVAQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEY 296 V+ YI RRL+ CA I A + I F WGF+ HF+ F+ R+GM P EY Sbjct: 251 NETVSAYILRRRLEQCARQIADPAWRGHSMTEIAFGWGFNSAPHFTRTFRDRYGMPPREY 310 Query: 297 RR 298 RR Sbjct: 311 RR 312 >UniRef50_C3KC85 Putative AraC family regulatory protein n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3KC85_PSEFS Length = 320 Score = 205 bits (523), Expect = 1e-51, Method: Composition-based stats. Identities = 72/300 (24%), Positives = 132/300 (44%), Gaps = 12/300 (4%) Query: 9 FQQWLSQINQVCGNFTGRLLTER--YTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGS 66 + W + CG+F L R + G + H GL L+ + T+ + R Sbjct: 11 LETWTRDLRAACGHFDTELAFNRSLFIGEVSKHSRGGLSLANLRTNAGLIKRERPNADHD 70 Query: 67 DDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLL 126 D + V Q SG + Q+++ +Q+ GD+ L+D++ + + SL L R + Sbjct: 71 MDQHCFLVSQRSGYCQITQNDQVIQLAPGDMLLMDSTGSIEISPFGLIEHASLALSRHEV 130 Query: 127 EQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSET---ESEAALQAMVCLLRPV 183 + P ++ + ++ H L+ + + E+EA A V LL Sbjct: 131 CKQLGGA-PKTFGKISSTKACGRMLHVLMDQLCREGLEGQDSIEEAEALQAAFVSLLGSA 189 Query: 184 LHQRE-----SVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKG 238 + + + V +ID+++ + L P +A +SVR LYR+F ++ Sbjct: 190 FELHDAPGDCAASLQGSNLRSYVQKVIDESLTQPGLSPVGLANRLNISVRHLYRLFEEQD 249 Query: 239 LVVAQYIRNRRLDFCADAIRHA-ADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 V +YI+ RL AD + + E + I + WGF+D +HFS FK++F ++P ++R Sbjct: 250 DSVCRYIQRARLKRSADDLTNPFLKRESITSIAYKWGFTDSAHFSRSFKKQFDLSPKDFR 309 >UniRef50_C8Q8U1 Transcriptional regulator, AraC family n=1 Tax=Pantoea sp. At-9b RepID=C8Q8U1_9ENTR Length = 311 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 62/298 (20%), Positives = 123/298 (41%), Gaps = 6/298 (2%) Query: 6 DNEFQQWLSQINQVCGNFTGR-LLTERYTGVLDTHFAKGLKLS-TVTTSGVNLSRTWQEV 63 + F W + N R ++G + ++ ++ + + RT + + Sbjct: 13 RHRFDAWRDAVCSRLINAEARQTHAGEFSGSFGYSMLGHVDIANHISRTALVWQRTQECI 72 Query: 64 KGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPR 123 + + FY + +G + Q++ + AGD+ + DA+ P E+ + LPR Sbjct: 73 RRHPNHDFYLGYICAGSGTLSQNDNHSCVSAGDVVIYDAATPFDFAM-ENVAINIVHLPR 131 Query: 124 TLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETE--SEAALQAMVCLLR 181 ++E+ P + + LD P + ++L E+ A E +E ++ ++ Sbjct: 132 QMIEKEAPSIARLAGKTLDLSRPGMTSLKQMLTEAFAFNAERENAFLTEQFANTLLNMIA 191 Query: 182 PVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVV 241 L+ ++S + + +VV+ + N+ E L IA +S R++ R+FA G Sbjct: 192 VSLNLQKSDAALKPDLYSRVVSYLRLNLHEHDLSVAQIANAHHVSPRTVSRVFAAHGTTP 251 Query: 242 AQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRK 299 ++ RL + + + GFSD SHFS F++ FG TP R+ Sbjct: 252 MNFVWQERLLASHKVLAEGKA-RNVTQVAMDHGFSDMSHFSLAFRKAFGYTPSSLIRQ 308 >UniRef50_UPI000050F7EC transcriptional regulator, AraC family protein n=1 Tax=Brevibacterium linens BL2 RepID=UPI000050F7EC Length = 337 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 68/313 (21%), Positives = 130/313 (41%), Gaps = 17/313 (5%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRL-LTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 + ++F W S ++ + G + + +S ++ + + RT Sbjct: 22 STASDFDGWKSLVSDSFVPLDTEPQRRGGFQGTISARDYDSVVMSHISANPHAVLRTPSL 81 Query: 63 VKG-----------SDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQ 111 + + ++ QL G ++ QD R+V + G + + D SRP +L + Sbjct: 82 ISRETAGPADGTAAAASNYYKVSLQLKGHGLLIQDGREVSLAPGSLAIYDTSRPYTLSFD 141 Query: 112 ESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN-PALSETESE 170 ++ P++ + + A + A+ + ++ +++ ++ P LS + Sbjct: 142 CDFSSYVMMFPQSRVNLPADTVGELTATSIGAEHQLGAVATQIITQAGAMLPTLSRSIGI 201 Query: 171 AALQAMVCLLRPVLH---QRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSV 227 +V LL V+ V R+R + ++ ID N+ + L P IA MSV Sbjct: 202 RLAGNVVDLLTTVMADELAEAEVPGERQRLWSEITAYIDANLADPQLSPSTIAAAHFMSV 261 Query: 228 RSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAAD-DEKLAGIGFHWGFSDQSHFSTVFK 286 R+L+++F G V+ IR RR+ C + +A IG WG D +HFS +F+ Sbjct: 262 RALHQVFEGSGETVSSEIRRRRIARCRQDLADPGQVQVPVAAIGARWGLGDPAHFSRLFR 321 Query: 287 QRFGMTPGEYRRK 299 G P +YRR Sbjct: 322 SVVGRPPAQYRRS 334 >UniRef50_C6QDE9 Transcriptional regulator, AraC family n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QDE9_9RHIZ Length = 326 Score = 204 bits (518), Expect = 5e-51, Method: Composition-based stats. Identities = 66/304 (21%), Positives = 126/304 (41%), Gaps = 8/304 (2%) Query: 5 VDNEFQQWLSQINQVCGNFTGRLLT-ERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEV 63 + F W + F R + G + G L+ + +G++ RT +++ Sbjct: 18 PRDRFDYWHEAACKAMVPFDCRPRDLSTFEGEITALPFAGAFLTIASNNGLSTWRTSRQL 77 Query: 64 KGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPR 123 S ++ + Q+SG + Q+ R V + AGD+TL+D + + K+ L + R Sbjct: 78 AQSKNS-VFICAQISGSTRISQNGRDVVLKAGDLTLVDNAAASTFECSTGCKEFLLEIER 136 Query: 124 TLLEQYFPHQKPICAERLDADLPMVQLSHRLLQES-MNNPALSETESEAALQAMVCLLRP 182 E + R+D L +Q + LS+T + + L+ Sbjct: 137 RNCEARLGRIGQLTTRRIDGSSGAGALVSNFIQLLPVQLALLSDTAQKQISYQLTDLVAL 196 Query: 183 VLHQRESVQPRRER----QFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKG 238 L + + R ++ ++D N+ + + +A G+SVR ++ + Sbjct: 197 ALTEGDGRSTARSSGRLISLLRLRAVVDANLTNPNVTCDELAAAAGISVRYANQLLEAEE 256 Query: 239 LVVAQYIRNRRLDFCADAIRHAAD-DEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 + + + RRL+ C DA+ A +++ I + WGF D SHF +FK G+TP YR Sbjct: 257 TSLQRLLFTRRLEKCQDALSDPAQAHRQISDIAYSWGFGDVSHFGRLFKSTTGLTPRSYR 316 Query: 298 RKFR 301 + + Sbjct: 317 VQAQ 320 >UniRef50_C9NAR3 Transcriptional regulator, AraC family n=3 Tax=Streptomyces RepID=C9NAR3_9ACTO Length = 322 Score = 203 bits (517), Expect = 5e-51, Method: Composition-based stats. Identities = 63/307 (20%), Positives = 128/307 (41%), Gaps = 9/307 (2%) Query: 4 AVDNEFQQWLSQINQVCGNFTGR--LLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQ 61 + + + + L + + A L + + + + + RT + Sbjct: 11 PARDREETIRHAVWESLVRIDIDHHLPPDDLAAHIGLDTAGPLGICSARATSMTIRRTPR 70 Query: 62 EVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLL 121 + ++ + Q+SG +++ Q+ RQ + GD+ L D P +L + E + Sbjct: 71 LAREDEEPAVFLGLQVSGTSMVVQNGRQALLRPGDLALYDTVSPYTLLFDEGVDHHFVRF 130 Query: 122 PRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPAL-SETESEAALQAMVCLL 180 PR L + + A L P+ L+ + + + L S ++A + + L+ Sbjct: 131 PRAALALPERALRDVTAVTLGPGNPVAGLASTYFSQLVVSAGLRSGPHADAVAEPSIELV 190 Query: 181 RPVLH-----QRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFA 235 R V+ Q + P ++ + ++ + L IA +SVR LY + A Sbjct: 191 RAVVATQLGSQDLARAPMEATLSLRIRRYMRAHLADSDLSAARIAAAHDISVRHLYTVLA 250 Query: 236 DKGLVVAQYIRNRRLDFCADAIRHA-ADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPG 294 G+ + +IR+ RL+ C + +A +G WGF D +HFS VF++ +G++P Sbjct: 251 RSGISLGDWIRSHRLEECKRELAGPQGRSRTIAAVGRSWGFVDATHFSKVFRKAYGVSPR 310 Query: 295 EYRRKFR 301 ++R + R Sbjct: 311 DWREENR 317 >UniRef50_C6X6W8 Transcriptional regulator, AraC family n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X6W8_METSD Length = 337 Score = 203 bits (517), Expect = 5e-51, Method: Composition-based stats. Identities = 64/266 (24%), Positives = 124/266 (46%), Gaps = 6/266 (2%) Query: 35 VLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGA 94 +D + K L+LS + ++ + L R QE S ++ V LSG+ ++EQ R+V + Sbjct: 57 EMDIYTWKQLRLSCIRSNAIKLKRLPQEPLLSSQDAYFGVVLLSGEYMLEQAGREVFLSP 116 Query: 95 GDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRL 154 GD+T+ DA+RP + S ++ + +PR L+ Q + A ++ + ++ Sbjct: 117 GDMTIYDATRPHRITCPGSFSKLIVSIPRELMRQKLAGVEHCTAMKIPGSKGIGAVAADF 176 Query: 155 LQESMNNP-ALSETESEAALQAMVCLLRPVLHQRESVQPRRERQFQ----KVVTLIDDNI 209 ++ S + +S+ +A + L L + + R + ++ ++ Sbjct: 177 MRASASQATGMSQLAFDALSDNALDLFTLALQEIRPPTSQLSRSRSLSLYNIKACVEKHL 236 Query: 210 REEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHA-ADDEKLAG 268 L + IA TG+S R + + A + + +++ RRL+ I A ++ Sbjct: 237 AHPQLDSQMIAQATGLSSRYINELLAAEETSLMRHVWERRLEKTHQDILGACQTGLAVSD 296 Query: 269 IGFHWGFSDQSHFSTVFKQRFGMTPG 294 I WGF+D SHFS FK++FG++P Sbjct: 297 IAMKWGFNDLSHFSRAFKRKFGLSPR 322 >UniRef50_B1Q2A8 Transcriptional activator for nphA1A2 n=4 Tax=Nocardiaceae RepID=B1Q2A8_9NOCA Length = 335 Score = 203 bits (517), Expect = 6e-51, Method: Composition-based stats. Identities = 61/299 (20%), Positives = 116/299 (38%), Gaps = 11/299 (3%) Query: 11 QWLSQINQV-CGNFTGRLLTER-YTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDD 68 QW S + ++ C R + L +ST+ + R+ ++ Sbjct: 34 QWASTLERLYCETDVAWPEPRRHFDAEWGGRPFGDLHVSTIRADAHTVVRSPAMIQSDSG 93 Query: 69 AWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQ 128 + G + Q R + G LLD + P + +Q+ + PR +L Sbjct: 94 EGYLVCLVTDGSVEVRQSGRATVVEPGSFALLDCAAPFVFHSPAPFRQVVVRSPREVLTS 153 Query: 129 YFPHQ--KPICAERLDADLPMVQLSHRLLQESMNNPA-----LSETESEAALQAMVCLLR 181 P + + A + D L RL + + A + + + +A+ + L Sbjct: 154 RLPGRIVEHGTARSIHGDTGAGGLVGRLFVDIADMDAPMSQGAAVSFASSAVDMLATALT 213 Query: 182 PVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVV 241 L + R +V +I+ N+ + + IA GMS+R+++++F +G Sbjct: 214 EGLLATSAADLHRTEDLTRVQRVIEQNLHDADITLSDIAAAAGMSLRTVHKLFNAEGTTT 273 Query: 242 AQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKF 300 ++ RL+ + D +A + GF D SHFS +F+ FG +PG YR++ Sbjct: 274 RAWLYQARLEAARRYLL--TTDLSVADVSECAGFRDVSHFSRLFRSTFGSSPGLYRKEH 330 >UniRef50_C3JZK1 AraC family regulatory protein n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3JZK1_PSEFS Length = 332 Score = 203 bits (516), Expect = 8e-51, Method: Composition-based stats. Identities = 67/311 (21%), Positives = 123/311 (39%), Gaps = 23/311 (7%) Query: 6 DNEFQQWLSQINQVCGN-----------FTGRLLTERYTGVLDTHFAKGLKLSTVTTSGV 54 + +W ++ G L + G L+ L+ +T S Sbjct: 15 SDRLMKWKEFMSDHLGRTPEYIKRLEATHIDPLHNGNFQGRLEYGDLGQLRFCRMTASAH 74 Query: 55 NLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESS 114 SR + D + Q++G + EQ ++ + D+ L+D +P S+ + Sbjct: 75 RYSRHLSKALDVVDTPRMLILQVAGVSHFEQGQQSSTVAPDDMLLVDCGKPFSVTSTQGC 134 Query: 115 KQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAAL- 173 + LL + + L + ++ L+ ++ + L ++S + Sbjct: 135 EHFILLFQGAAGQ--LTQTGDMH---LSGRNGLGRMLMHLISDAYHQYPLLNSQSAGLIG 189 Query: 174 QAMVCLLRPVLHQRESVQPRRERQF----QKVVTLIDDNIREEILRPEWIAGETGMSVRS 229 ++ LL L ++ + ++ I+ ++ + L E IA SVRS Sbjct: 190 DSIAGLLNNALKNKQDEKQLDHDFRFFKQNRLKAYIERHLADRDLSIERIANAEQCSVRS 249 Query: 230 LYRMFADK-GLVVAQYIRNRRLDFCADAIRHA-ADDEKLAGIGFHWGFSDQSHFSTVFKQ 287 L+R F D+ G V++YI RRL CA+ +R+ L I + WG+ SHFS FK Sbjct: 250 LHRAFQDELGCSVSEYIWQRRLSRCAEDLRNREQTHRSLTEIAYAWGYGSSSHFSRHFKS 309 Query: 288 RFGMTPGEYRR 298 FGM+P +R Sbjct: 310 TFGMSPRLFRE 320 >UniRef50_C5CWJ0 Transcriptional regulator, AraC family n=1 Tax=Variovorax paradoxus S110 RepID=C5CWJ0_VARPS Length = 305 Score = 202 bits (515), Expect = 9e-51, Method: Composition-based stats. Identities = 64/290 (22%), Positives = 120/290 (41%), Gaps = 8/290 (2%) Query: 10 QQWLSQINQVCGNFTGRLL-TERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDD 68 W + Q C + + + + + L T+ +R +++ + Sbjct: 11 DHWHDVVCQYCIPAASQTVHRQNFDAAVTGRSVGALDAVTLVAPEHTWTRDTADIRRGPE 70 Query: 69 AWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQ 128 + + SG +EQ+ GDI L DA+RP ++ +PR LL + Sbjct: 71 SSLWLSLMESGVGYVEQNGNSTVQNTGDIVLYDAARPWKYRL-NMQTFYTVRIPRDLLTR 129 Query: 129 YFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESE--AALQAMVCLLRPVLHQ 186 P + A L A + L++E N AL+ + +++ LL V+ Sbjct: 130 RSPAAERFVATSLGAGTGFRPVLGSLIKELRENSALASAPAAATHVTTSLLELLACVIDL 189 Query: 187 RESVQPRR---ERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQ 243 P + + +++ + +I + L +A +S+R+L R+FA G + Sbjct: 190 HAGNGPSQSVTDALYKRACAYVMQHIEDPELSIASVAKSERISLRTLARVFAANGTTPMR 249 Query: 244 YIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTP 293 YI +RL+ A+ + K++ ++GFSD SHFS FK+ FG++P Sbjct: 250 YIWQKRLEASYCAMAQGSV-RKVSEAAMNYGFSDLSHFSRAFKKAFGVSP 298 >UniRef50_Q5YUM1 Putative transcriptional regulator n=1 Tax=Nocardia farcinica RepID=Q5YUM1_NOCFA Length = 309 Score = 202 bits (514), Expect = 1e-50, Method: Composition-based stats. Identities = 70/300 (23%), Positives = 125/300 (41%), Gaps = 8/300 (2%) Query: 8 EFQQWLSQINQVCGNF-TGRLLTERYTGVLDTHFAKGL-KLSTVTTSGVNLSRTWQEVKG 65 +F W + I++ + G L L L+TV + +++R+ V+ Sbjct: 8 DFDHWETSISEAFVALRASTPDPASFRGALVQVGHGELCHLTTVDAAPQDVARSPGLVRR 67 Query: 66 SDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTL 125 + Q G+ +EQD R +G GD+ + D +RP +L + LLLPRT Sbjct: 68 NPTDSVMIGLQTRGRGFVEQDGRVAAVGPGDLVVYDPARPYTLRFPTPFVTRVLLLPRTH 127 Query: 126 LEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN-PALSETESEA----ALQAMVCLL 180 L + + A L + + + L+E ++ A LL Sbjct: 128 LREVEQAIGDLTARALPGAGGIGAVFGAFVTSVAEQRDTLTEDTHQSLCWQAAALGTALL 187 Query: 181 RPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLV 240 R V P +E ++ T ++++ + L +A +S R L+++FA++ Sbjct: 188 RTVAGTSTPHSPAQEDLLRRARTYAEEHLADPALNAAALARALHVSPRYLFKLFAERETT 247 Query: 241 VAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKF 300 ++I+ RRLD I A ++ + GF+D +HFS FK RFG+TP + + Sbjct: 248 PGRWIQARRLDRARAEIA-ANPAVLVSVVAARCGFADPTHFSRAFKSRFGLTPSAFAARV 306 >UniRef50_B2JSH9 Transcriptional regulator, AraC family n=1 Tax=Burkholderia phymatum STM815 RepID=B2JSH9_BURP8 Length = 354 Score = 202 bits (514), Expect = 1e-50, Method: Composition-based stats. Identities = 75/304 (24%), Positives = 131/304 (43%), Gaps = 8/304 (2%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLLT-ERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 +V EF + + + + T E ++G ++ H L + + RT + Sbjct: 46 SVGKEFDYFHESVTRHFVPAECKCSTRENFSGEVNGHQVGQLLVGRYSAKQHIWDRTEHD 105 Query: 63 VKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLP 122 VK D + SG M+Q R++ +G GDI L D +RP S I + +P Sbjct: 106 VKTKPDEDIVALLLESGSGKMQQAGRKLVMGVGDIMLFDGARPFRHEVIPDS-IILVRMP 164 Query: 123 RTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESM----NNPALSETESEAALQAMVC 178 R+L+ +F + ++ + L L++E+ P L+ A + Sbjct: 165 RSLIRSHFSAVEKFVNMKIADGKSIQPLLSGLMREAYALTEETPLLARIHLANAFINAIS 224 Query: 179 LLRPVLHQRESVQPRRER-QFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADK 237 + + E + R F+K +++ID I ++ L IA +S R+L R+FA + Sbjct: 225 VALEIQSASEVNESYEGRVLFEKALSIIDARIDDQALNVAEIASALHVSDRTLSRIFARE 284 Query: 238 GLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 G +Q + NRRL ++ ++ I F GFSD SHFS FK+ FG P + Sbjct: 285 GTTPSQTLWNRRLQKSYRLLQE-NVALQVTQIAFQCGFSDLSHFSRSFKRVFGSAPSQIL 343 Query: 298 RKFR 301 ++ + Sbjct: 344 KQRK 347 >UniRef50_Q603U3 Transcriptional regulator, AraC family n=1 Tax=Methylococcus capsulatus RepID=Q603U3_METCA Length = 354 Score = 201 bits (512), Expect = 2e-50, Method: Composition-based stats. Identities = 61/300 (20%), Positives = 117/300 (39%), Gaps = 8/300 (2%) Query: 4 AVDNEFQQWLSQINQVCG-NFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 ++ + W I+ + + + L T + L+ + G R Sbjct: 23 PAEDRYSIWKESISVIFDVEREVETGSAPFAATLTTCHLGSMLLADTASVGQCFQRKSPL 82 Query: 63 VKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLP 122 + G ER + GD+ LLD ++P + ++L+LP Sbjct: 83 IARDGLDHCIIQVYQYGTTRGRWGERHSTVQPGDVFLLDLTQPLD-SCASDFRNLTLMLP 141 Query: 123 RTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMN-NPALSETESEAALQAMVCLLR 181 R LL + + + L D +L + + LS E++ + +V L+ Sbjct: 142 RDLLAPHLGAPERLHGRSLPRDSARGRLLSQHIATLWEVATTLSSDEAQCIARGLVHLIG 201 Query: 182 PVLHQRESVQPRRER---QFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKG 238 + R E + V I +++ + L PE +A +S LY +F G Sbjct: 202 AYFGAGRVEEDRPETGAVLLETVRRHIGNHLGDPRLTPESLAAYFRVSRSYLYSLFQPLG 261 Query: 239 LVVAQYIRNRRLDFCADAI-RHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 + +YI+ +RL + R A+ +++ I + G+ +++HFS F++ FGM+P E R Sbjct: 262 G-ITRYIQQQRLRRAFLELTRPASRPRRVSEIAYRVGYRNEAHFSRSFRRAFGMSPSEAR 320 >UniRef50_D1S730 Transcriptional regulator, AraC family (Fragment) n=1 Tax=Micromonospora aurantiaca ATCC 27029 RepID=D1S730_9ACTO Length = 324 Score = 201 bits (512), Expect = 2e-50, Method: Composition-based stats. Identities = 78/304 (25%), Positives = 123/304 (40%), Gaps = 15/304 (4%) Query: 12 WLSQINQVCGNFTGRLL-TERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAW 70 WL + R + + + ++L V+ RT + ++ SD + Sbjct: 1 WLDMMASTPTPLRVRTAHADDFVARAEFVDLGRMQLIRYRYPSVDCVRTSKLIQRSDPDY 60 Query: 71 FYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQES------SKQISLLLPRT 124 + LSG + +Q+ ++ + GD+T D SRP + + I L+P Sbjct: 61 YLLALTLSGTSQADQEGQRARCRPGDLTFYDCSRPHEVSHHADPAGSAYAHSIVALMPYD 120 Query: 125 LLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNP-----ALSETESEAALQAMVCL 179 L P+ A R+ + L L NP A +E L + L Sbjct: 121 ALPLPPRRLAPLFAGRMSGSEGVGGLVADFLIRITANPEQYHAADAERLGAVGLDLVATL 180 Query: 180 LRPVLHQRESVQP--RRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADK 237 L L + + RR +V + ++ + L P IA +SVRSL+R+F D+ Sbjct: 181 LGRNLVSEDEMPTEVRRRALQAQVRAYVRQHLGDATLDPGAIADAHHISVRSLHRLFEDE 240 Query: 238 GLVVAQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEY 296 VA YIR+ RL C + A D + I WGF D++HFS VF+ G TP EY Sbjct: 241 ETTVAAYIRDERLARCRRDLADPALSDRSIQVIAARWGFRDKAHFSRVFRTTQGETPQEY 300 Query: 297 RRKF 300 R + Sbjct: 301 RARH 304 >UniRef50_A1VJU8 Transcriptional regulator, AraC family n=1 Tax=Polaromonas naphthalenivorans CJ2 RepID=A1VJU8_POLNA Length = 348 Score = 201 bits (511), Expect = 3e-50, Method: Composition-based stats. Identities = 71/304 (23%), Positives = 117/304 (38%), Gaps = 17/304 (5%) Query: 11 QWLSQINQVCGNFTGRLL-----------TERYTGVLDTHFAKGLKLSTVTTSGVNLSRT 59 W ++ G L + ++G +D G L +T S R Sbjct: 20 MWEDAVHTGIGRMPAELRHQEVIHLLPVGAQAFSGRIDYGDLAGTGLCRMTASPHRFQRA 79 Query: 60 WQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISL 119 +E + V Q+ + EQ ER + GD +LD RP +QI + Sbjct: 80 LREGASLAASPLILVIQVKNSSYFEQRERSGMLSPGDWCVLDTYRPFGWNSASGCEQIIM 139 Query: 120 LLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCL 179 + R A+R D ++ ++ E M S +L + + Sbjct: 140 TIQRPADSGLGDLIARGAAQRCDGKTGAARILQAMVSEVMGQIHHLAPYSAGSLASALTA 199 Query: 180 LR--PVLHQRESVQP--RRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFA 235 + Q E+ P R+ Q ++ I+ + E L + IA MS RS++R F+ Sbjct: 200 TAWNALQEQLEAPAPILLRDTQCSRLKAWIETRLAEPDLSVDTIAQGCRMSARSVHRAFS 259 Query: 236 DKGL-VVAQYIRNRRLDFCADAIRHAAD-DEKLAGIGFHWGFSDQSHFSTVFKQRFGMTP 293 V+ Y+ RR+ CA A+++ + + I WGFS SHFS VF+ G++P Sbjct: 260 SDPTGSVSSYLWQRRVVQCAAALKNPQEMHRSITDIALSWGFSSSSHFSRVFRSTLGVSP 319 Query: 294 GEYR 297 YR Sbjct: 320 RSYR 323 >UniRef50_B8HJE0 Transcriptional regulator, AraC family n=1 Tax=Arthrobacter chlorophenolicus A6 RepID=B8HJE0_ARTCA Length = 333 Score = 200 bits (510), Expect = 4e-50, Method: Composition-based stats. Identities = 70/306 (22%), Positives = 130/306 (42%), Gaps = 9/306 (2%) Query: 3 PAVDNEFQQWLSQINQVCGNFTGRL-LTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQ 61 A + W +++ +F L + G L G++ ++T R + Sbjct: 20 QAAVRSIEDWGVLLSRSLMSFEVELERPGAFQGYLRNRKVAGIEFIEMSTGKHLAHRGAE 79 Query: 62 EVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLL 121 + +D + Q++G QD R + GD+TL D +RP ++ + + + Sbjct: 80 SISSTDRPDYLLCLQIAGVGEFSQDNRTAVLQPGDLTLFDTTRPTTVVSSTDYRNLCMKF 139 Query: 122 PRTLLEQYFPHQKPICAERLDADLPMVQLSHRLL---QESMNNPALSE--TESEAALQAM 176 P+ L+ + A R A + LL + M+ + ++ AL + Sbjct: 140 PQRLINLPPEQLGQLTATRTGARDGFAPAAGTLLITMNQLMDTSSGRSKILAAQGALDII 199 Query: 177 VCLLRPVLHQRESVQPR--RERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMF 234 + + L P+ +++ + ID+N+ + L P IA +S+R L+ +F Sbjct: 200 TTMFQRQLDISTPSYPQATSPALLEQIRSYIDENLSDPGLGPRTIAAAHYISLRQLHGIF 259 Query: 235 ADKGLVVAQYIRNRRLDFCADAIRHAADDE-KLAGIGFHWGFSDQSHFSTVFKQRFGMTP 293 +GL VA ++R++RL C + A A IG WGF SHF F++ FG+TP Sbjct: 260 QAQGLTVASWVRHQRLQRCRRDLSDPALHAVSAASIGLRWGFKTASHFGMSFRKTFGLTP 319 Query: 294 GEYRRK 299 E+R++ Sbjct: 320 AEFRQE 325 >UniRef50_A5VPA4 Transcriptional regulator, AraC family n=41 Tax=Brucellaceae RepID=A5VPA4_BRUO2 Length = 356 Score = 200 bits (509), Expect = 5e-50, Method: Composition-based stats. Identities = 71/296 (23%), Positives = 126/296 (42%), Gaps = 10/296 (3%) Query: 10 QQWLSQINQVCGNFTGRLLTE-RYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDD 68 W + + + + + G L + + + T++G N RT + SD Sbjct: 19 DFWREAVKLIYDVMSSDDQSGKGFKGTLRSQQFGTCLIGSATSNGQNYQRTPSIIAQSDM 78 Query: 69 AWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQ 128 + ++G+ + + V GDI +LD + S E+ ++I++++ R LE+ Sbjct: 79 DHYVLQAMIAGRMTGDFNGTNVSAKPGDIVILDLLQTVS-SSVEAGERITIVIQRGELEK 137 Query: 129 YFPHQKPICAERLDADLPMVQLSHRLLQESMNNPA-LSETESEAALQAMVCLLRPVLHQR 187 + + L + P +L L+ A L E+ AA +AM+ LL + + Sbjct: 138 LVG-WRNLHGMVLPGEAPTTRLLFEYLRGLDAVAAELPPNEALAAQEAMLTLLSASITSK 196 Query: 188 ESVQ----PRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQ 243 E P +++T ID+N+ +L P I +S LYR F G VA+ Sbjct: 197 EEEAIENTPANLPMRHRIITYIDENLTNPLLGPHSIMQHFHLSRSHLYRAFEPDGG-VAK 255 Query: 244 YIRNRRLDFCADAIRHAADDEK-LAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRR 298 IR++RLD + L I + GF+D++ F+ FK RF ++P E R Sbjct: 256 VIRDKRLDLAYRILIDRKGKPTLLKEIAYCCGFNDRTQFTKAFKARFELSPKEARE 311 >UniRef50_B2GIQ7 Putative AraC family transcriptional regulator n=1 Tax=Kocuria rhizophila DC2201 RepID=B2GIQ7_KOCRD Length = 316 Score = 200 bits (509), Expect = 5e-50, Method: Composition-based stats. Identities = 71/302 (23%), Positives = 124/302 (41%), Gaps = 6/302 (1%) Query: 5 VDNEFQQWLSQINQVCGNFTGRLLTER-YTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEV 63 D QW IN + + L T + L +TTS + RT + V Sbjct: 11 ADLTLAQWRETINASFAALEITAPVDSEFRADLTTVELDDVHLFDMTTSAHRVVRTAEMV 70 Query: 64 KGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPR 123 + QL G+A + QD R+ +G G + L A RP L + + + PR Sbjct: 71 ARDAGEYLKLSLQLQGRARLRQDGRECVLGPGGLGLYAAYRPYELVYDGPQHSLVMTFPR 130 Query: 124 TLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEA-ALQAMVCLLRP 182 ++++ + A+R+ + + +++ + + N L + +++ + +L Sbjct: 131 SVVQLIPAQLDLVTAQRIGQEDGLGRVAVPMFRNLAENMDLLRGPHASKLVRSALDMLVS 190 Query: 183 VLHQ---RESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGL 239 VL + + Q+ I D++ + L P IA +SVR L+ FA + L Sbjct: 191 VLSAEVVEPAGAHAGDLLVQQATAYIADHLADPELSPGSIARALYVSVRQLHSRFAAQHL 250 Query: 240 VVAQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRR 298 VA +IR RL + A D+ + I G +D +H S FK +G +P YRR Sbjct: 251 TVAAHIRAVRLAAIRAELADPAHRDDTVHTISARRGLTDPAHVSKAFKAEYGESPTAYRR 310 Query: 299 KF 300 + Sbjct: 311 RV 312 >UniRef50_Q162N1 Transcriptional regulator, AraC family, putative n=4 Tax=Rhodobacteraceae RepID=Q162N1_ROSDO Length = 320 Score = 200 bits (508), Expect = 7e-50, Method: Composition-based stats. Identities = 58/298 (19%), Positives = 114/298 (38%), Gaps = 8/298 (2%) Query: 11 QWLSQINQVCGNFTGRLL-TERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDA 69 QW ++ + E + G ++T + LS + G+ R + D+ Sbjct: 16 QWQEAVSDTFFPLETTMAEGETFAGAMNTWNLGIVGLSHMRCDGILYKRHKRHFLDEVDS 75 Query: 70 WFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQY 129 G Q+ RQ G+ + P + +++++ + L + + Sbjct: 76 SLLITIPRLGNVGFNQNARQANCSPGEFLVERGDLPYEFWHEQTNELLVLKVSSESVRAR 135 Query: 130 FPHQKPICAERLDADLPMVQLSHRLLQESMNN-PALSETESEAALQAMVCLLRPVLHQRE 188 + A D + +++ + + L E AA + ++ LL + + + Sbjct: 136 IGPTDRLAALSFDGTAGVASYFLDVVKTTAEHVDLLDEAARSAAGKHILDLLCLAIRKDD 195 Query: 189 SVQPR-----RERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQ 243 V R + I +N+ E L +A +S+R L ++F D ++ Sbjct: 196 RVLDSNTSTIRAAHLHRAEQFIRNNLSNENLSSSLVAEACNVSLRYLQQLFLDADKSISG 255 Query: 244 YIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKFR 301 +IR +RL + + +A I WGFSDQS F+ ++ +FG TP E RR + Sbjct: 256 FIREKRLIRAREDLC-VEGTITIAEIAHRWGFSDQSQFNKAYRAQFGCTPTETRRSAQ 312 >UniRef50_A1WI21 Transcriptional regulator, AraC family n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WI21_VEREI Length = 317 Score = 199 bits (507), Expect = 8e-50, Method: Composition-based stats. Identities = 70/299 (23%), Positives = 117/299 (39%), Gaps = 9/299 (3%) Query: 11 QWLSQINQVCGNFT-GRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDA 69 W I + R+ G +D ++LS + +S + R Q + + Sbjct: 14 YWREAIANAYFDLQLSFGDEHRFDGQIDIWDLGTVELSLLQSSALAYRRLRQHCRAQERQ 73 Query: 70 WFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQY 129 Q Q R + G L + P + + L LP L+ Sbjct: 74 ML-VTMPFQSQVEFTQLGRSTRCAPGQFLLESSEEPYDFGHGQDNAMWVLKLPVAALKAR 132 Query: 130 FPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQA--MVCLLRPVLHQ- 186 CA + D+ + +L H LQ + +L A ++ LL L Q Sbjct: 133 IGEPSRFCARQYDSLQGLGRLFHDYLQLVARHCRADHGSHVRSLMASQLIDLLALSLQQH 192 Query: 187 ----RESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVA 242 + S R+ ++ + ++ + L P+ IA +G+S+R L+++F D G VA Sbjct: 193 PDALQSSHSAVRDAHLARIEAHVHRHLSDPALSPQSIAQASGISLRYLHQLFEDTGQSVA 252 Query: 243 QYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKFR 301 Q+IR RL +A+ A +A I + GF DQ+ FS F+++FG P E R R Sbjct: 253 QWIRELRLQSAHEALSRANGQTTVAQIAYGAGFGDQAQFSHAFRKKFGHAPSEMLRSSR 311 >UniRef50_C5AL79 Putative uncharacterized protein n=1 Tax=Burkholderia glumae BGR1 RepID=C5AL79_BURGB Length = 305 Score = 199 bits (507), Expect = 9e-50, Method: Composition-based stats. Identities = 71/303 (23%), Positives = 133/303 (43%), Gaps = 10/303 (3%) Query: 1 MNPAVDNEFQQWLSQINQVCGNFTGRLL--TERYTGVLDTHFAKGLKLSTVTTSGVNLSR 58 M P F +W ++ +CG F R + + G + GL+++ + T+ ++ R Sbjct: 1 MTPQAAARFARWSDEVLAICGRFQIRPPEHADLFLGDIRRRSLGGLEIADIRTNAGSIRR 60 Query: 59 TWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQIS 118 + DD + + V Q G + ++ + AG++ LLD+++ + Q Q+S Sbjct: 61 QPRRAGSLDDRYCFLVLQREGAVRVGGEQAGFVLEAGEMALLDSAQSFEMRPQGLLHQMS 120 Query: 119 LLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQES---MNNPALSETESEAALQA 175 + LPR + +L QL +L ++ +++ E A +A Sbjct: 121 VHLPREAFDTVARAGNGFG--KLSRRGLSGQLLRDMLLRLTVPADDGDVTQDEGAALREA 178 Query: 176 MVCLLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFA 235 + L R L R + I N+++E +A + G+S R ++R+F Sbjct: 179 LGALSRGALCGEPPGGDAPLRL--RAQRQILMNLQDEDQSVARLARQLGVSPRQVHRLFE 236 Query: 236 DKGLVVAQYIRNRRLDF-CADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPG 294 G V ++I R++ C D +R D + I WGF D +HFS VF+++ G++P Sbjct: 237 GAGESVGRHIMRMRIEASCRDLLRTELRDWTITSIAQKWGFGDAAHFSRVFRRQTGVSPR 296 Query: 295 EYR 297 E+R Sbjct: 297 EFR 299 >UniRef50_B1GXZ7 Transcriptional regulator AraC family n=4 Tax=Rhodococcus RepID=B1GXZ7_RHOER Length = 326 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 73/299 (24%), Positives = 130/299 (43%), Gaps = 11/299 (3%) Query: 12 WLSQINQVCGNFTGRLLTE--RYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDA 69 W + + + + R++G + + +++S V + + R+ +K Sbjct: 19 WADLLREHFVALDVSDIGDGDRFSGAVHSAQLAHVRVSAVQSMEQRIVRSNSLIKSDGAD 78 Query: 70 WFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSK-----QISLLLPRT 124 + G A++ QD+R+ + GD L D +RP + + PR+ Sbjct: 79 YLQIGMIRRGSAVVRQDDRECVLRRGDYVLYDTTRPFDWQIEGHAHDGIWGLEVFTWPRS 138 Query: 125 LLEQYFPHQKPICAERLDADLPMVQLSHRLLQE--SMNNPALSETESEAALQAMVCLLRP 182 L + A D + L R L + S+ + + + E + + L++ Sbjct: 139 YLSLSDAEVTSLTAIAFDGHAGLSGLLGRFLHDLASVRMTSDASGDEEEVVNEIGNLVKS 198 Query: 183 VLHQRE-SVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVV 241 VLH + RR ++ +++ID I + L P IAG +S+R L+R FA+ G V Sbjct: 199 VLHTTARPITSRRTSLYESALSVIDARIADPALSPVDIAGSVKVSIRQLHRAFAEHGTTV 258 Query: 242 AQYIRNRRLDFCADAI-RHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRK 299 ++ IR+RRLD C I + + L I WGF+D + FS FK FG++P YR + Sbjct: 259 SRSIRSRRLDGCRREIVQRHGVERSLTQISHRWGFTDLAAFSRAFKAEFGISPRRYRSQ 317 >UniRef50_B2UHP4 Transcriptional regulator, AraC family n=2 Tax=Ralstonia pickettii RepID=B2UHP4_RALPJ Length = 338 Score = 199 bits (505), Expect = 1e-49, Method: Composition-based stats. Identities = 64/297 (21%), Positives = 126/297 (42%), Gaps = 7/297 (2%) Query: 6 DNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKG 65 +++F W IN + + + + + +D + + ++ + R+ ++ Sbjct: 17 EHQFAAWRDAINVLFDSRSAAPQSHGFQASVDAYLCGETGVGMLSAQAQHYDRSRSKLGR 76 Query: 66 SDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTL 125 + + L G GD+ ++DA++P + S+ +SL +PR L Sbjct: 77 DGMDVYVLQYYLEGSCGQRDGASDSATRPGDLFIVDAAQPLA-TSTTDSRFLSLAVPRRL 135 Query: 126 LEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN-PALSETESEAALQAMVCLLRPVL 184 L + L PMV L L ++ LS+ E++A + + L + Sbjct: 136 LAPLLRAPDELSMRVLRGGAPMVGLLRDHLCSLYHSVGKLSDAEAQAVIPGTLQLAAAAI 195 Query: 185 HQR---ESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVV 241 + + + RE F V + N+ + L PE ++ + G+S +LYR+F +G Sbjct: 196 NCQVTEANAPAVRESLFASVCRHVQHNLSDLALSPEGVSVQFGISRATLYRLFEREGG-F 254 Query: 242 AQYIRNRRLDFCADAIRH-AADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 Y+R +RL C + + +A I +GFSD S+F+ +++ GM+P E R Sbjct: 255 FNYLRMQRLRQCHAILADRSQTHRSVAEIAQTYGFSDASNFARAYRRATGMSPRETR 311 >UniRef50_Q2KTV5 AraC-family transcriptional regulator n=1 Tax=Bordetella avium 197N RepID=Q2KTV5_BORA1 Length = 318 Score = 199 bits (505), Expect = 1e-49, Method: Composition-based stats. Identities = 59/300 (19%), Positives = 112/300 (37%), Gaps = 7/300 (2%) Query: 6 DNEFQQWLSQINQVCGNFTGR-LLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVK 64 + + W + Q + + ++R+ G L + L LS + ++ + R Q + Sbjct: 14 PDRSRHWEGAVGQTYFSLQLQFHDSDRFEGSLHSWKLGALSLSQLASTPLCYRRLKQHLN 73 Query: 65 GSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRT 124 ++ + Q R + G L P + + L +P Sbjct: 74 DVNEEQYLVTVPRRSAIRFSQGGRDTECRPGAFLLEHGQSPYEFSYARDNALWVLKVPGE 133 Query: 125 LLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAAL-QAMVCLLRPV 183 L CA DA L + + + L Q +V LL Sbjct: 134 SLRARLHTPNRYCALAFDATQGAGWLFASYVNLIGQQLLRGDDTARHVLGQHLVELLACS 193 Query: 184 LHQRESV-----QPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKG 238 + V P R ++ + ++ L P +A G+SVR L+ ++ +G Sbjct: 194 VEGDARVLSSQDSPVRNAHLSRIEHYVRQHLGNADLNPTQVAQACGISVRYLHSLYQGQG 253 Query: 239 LVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRR 298 ++++ +RL+ + A+ +A I WGF+DQ+HFS ++K+R+G P + RR Sbjct: 254 QTFSEWLCGQRLERAHHTLLSASALHSIARIAQQWGFADQAHFSRLYKRRYGYPPSQARR 313 >UniRef50_A3KKG5 Putative transcriptional regulator n=1 Tax=Streptomyces ambofaciens ATCC 23877 RepID=A3KKG5_STRAM Length = 338 Score = 199 bits (505), Expect = 1e-49, Method: Composition-based stats. Identities = 71/304 (23%), Positives = 123/304 (40%), Gaps = 13/304 (4%) Query: 6 DNEFQQWLSQINQVCG--NFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEV 63 + W +++ + TGR G + ++L V L+RT + Sbjct: 13 RDPLGHWQEAVSRALVPSHVTGR-DGRPPGGRITAASLGAVRLCAVEGDAQRLTRTSAHI 71 Query: 64 ---KGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLL 120 +G+ +A+ SG A + QD R + GD+ D SRP ++ +L Sbjct: 72 AHARGASEAFLVIGVLTSGTATLMQDGRHASVDEGDLMFYDTSRPYAVDHPGRFACSLVL 131 Query: 121 LPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLL 180 LPR L + + + A + + L +++ A L A V L Sbjct: 132 LPRGALLLPDEQVRRVTGSAVTASRGVAAVLAPFLASLVSSAPACPPAVAAHLAAAVVDL 191 Query: 181 RPVL------HQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMF 234 L H RER + + ID ++ + L P+ +A +SVR L+R+F Sbjct: 192 ATTLVADRTAHALPGPDTGRERLVRCIREHIDHHLPDPALSPQSVARAHHISVRYLHRLF 251 Query: 235 ADKGLVVAQYIRNRRLDF-CADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTP 293 ++G+ V + I+ RRL+ + R +A + WGF +HFS F+ +G +P Sbjct: 252 EEEGVTVRRLIQRRRLEESARELARGGTTAPTVASVARRWGFVSPAHFSRAFRGLYGHSP 311 Query: 294 GEYR 297 E+R Sbjct: 312 REWR 315 >UniRef50_B6R2R9 Transcriptional regulator, AraC family n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R2R9_9RHOB Length = 356 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 78/306 (25%), Positives = 124/306 (40%), Gaps = 14/306 (4%) Query: 4 AVDNEFQQWLSQIN---QVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTW 60 A D F W I+ QV + R T+ +T +D H + L+ + R+ Sbjct: 30 APDERFSLWKESISFMFQVEADHAVR--TDDFTAEVDAHMFGQIVLARTKSRKQFWERSE 87 Query: 61 QEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLL 120 + F +G E D Q + + + D +R W + +SL+ Sbjct: 88 LTIARDGMDHFMIQLFETGDMFYEHDGAQHSVAQDGLIIFDLARTSK-SWTNTFSNLSLI 146 Query: 121 LPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMN-NPALSETESEAALQAMVCL 179 +PR LLE + RL A PMVQL + ++ + LS +++ A + L Sbjct: 147 IPRELLEPKLVYPDGQHMRRLPASQPMVQLLYSHIKTLKELSDQLSLSQAADVNPATLSL 206 Query: 180 LRPVLHQRE-----SVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMF 234 + L+ S Q I++N+ L PE +A + G+S LY MF Sbjct: 207 VAACLNSTADGVVISDANSHAAQIMLAKRAINENLSNPALTPEVVASKAGISRSKLYEMF 266 Query: 235 ADKGLVVAQYIRNRRLDFCADAI-RHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTP 293 G V ++ +RL A+ ++ A I F +GF+ +S FS FK+RF MTP Sbjct: 267 RSYGG-VKSFVLEQRLKGAMMALISNSNAHRSNAEIAFSFGFAYESTFSRAFKKRFSMTP 325 Query: 294 GEYRRK 299 E R Sbjct: 326 TEARNS 331 >UniRef50_A9E8K4 TRANSCRIPTIONAL REGULATOR, ARAC FAMILY n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9E8K4_9RHOB Length = 314 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 70/294 (23%), Positives = 125/294 (42%), Gaps = 9/294 (3%) Query: 13 LSQINQVCGNFTGRLLTE--RYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAW 70 + I Q+CG F G+ G + + V+ +RT ++ + Sbjct: 18 RNDILQICGAFEVEPARREGPSHGLARKREMGGFEAALVSLDAQEAARTQTCIRRDPGEY 77 Query: 71 FYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQES-SKQISLLLPRTLLEQY 129 F+ + Q G+ ++ Q+ + GD+ ++DA+RP + + QIS+ LPR + Sbjct: 78 FFMLVQDVGECVVHQNGSSTLLRPGDMYIVDATRPSKFVYDGQLAHQISVHLPRDEMIGR 137 Query: 130 FPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPVLHQRES 189 F +D + P+ +L + M+ P + + +A L+ LH+R S Sbjct: 138 FGGICD-GGVAIDRNDPLWLALRAVLYKMMHCPPETGLQ---LSEAFYGLMGAYLHERRS 193 Query: 190 VQ-PRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNR 248 R + ++ + L+ + R+ P +A G+S+RSL R F G Q + Sbjct: 194 QTLDARGQIIERALQLMTRHYRDPEFGPSALALHLGVSLRSLQRYFEPLGETPGQRLLQL 253 Query: 249 RLDFCADAI-RHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKFR 301 RL + R + + + GF+D SHF F+QR+GMTPG + R Sbjct: 254 RLTQAHAELSRRGGMEVSVTDCAYGCGFNDLSHFYRAFRQRYGMTPGAVVAQVR 307 >UniRef50_D2AT05 AraC family transcriptional regulator n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2AT05_STRRD Length = 342 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 72/308 (23%), Positives = 125/308 (40%), Gaps = 12/308 (3%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLLTE-RYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 + F W + R E + + ++++T+ + RT + Sbjct: 12 PTADRFAWWHEMTCRTHVPTVIRSDHEADFRATMRLLDLGAVQVATLHYPSLRPQRTPKL 71 Query: 63 VKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPC---SLYWQESSKQISL 119 ++ SD + L G + Q R+ +G D+ L D SRP + + + ++L Sbjct: 72 IRQSDPEMYCLSLTLRGTMTLAQAGRETVLGPQDLALYDTSRPFYGTTSGNGDRAASMTL 131 Query: 120 LLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAM--- 176 +PRTLL + A L + L L + + + A A L A+ Sbjct: 132 HIPRTLLPLPAGTVSRLTAVGLSGRQGIGALLCGHLGKLVRHAAEYTAADAARLSAITVD 191 Query: 177 --VCLLRPVLHQRESVQPRRERQF--QKVVTLIDDNIREEILRPEWIAGETGMSVRSLYR 232 + L ++ RQ ++ I ++ + L E IA +SVR LY+ Sbjct: 192 LFAAMCAHHLEADAALPAETHRQVLQTRIHAFIQQHLGDPTLCAETIAAAHQISVRYLYQ 251 Query: 233 MFADKGLVVAQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGM 291 +F D+GL VA +IR+RRL+ C + A + I WGF+ HFS F+ +G Sbjct: 252 LFHDQGLTVAAWIRHRRLERCRRDLTDPALRSRPIHAIATRWGFAGNPHFSRTFRAAYGS 311 Query: 292 TPGEYRRK 299 +P +YR + Sbjct: 312 SPSDYRHQ 319 >UniRef50_C0ATQ8 Putative uncharacterized protein n=1 Tax=Proteus penneri ATCC 35198 RepID=C0ATQ8_9ENTR Length = 321 Score = 198 bits (503), Expect = 2e-49, Method: Composition-based stats. Identities = 59/303 (19%), Positives = 115/303 (37%), Gaps = 11/303 (3%) Query: 7 NEFQQWLSQINQVCG-----NFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQ 61 + F + I N R+ + ++ + ++G S Sbjct: 14 DRFSVFRDTIKDRFLSSYECNEVELPPHSRFYANIVEQKVTNIRFIQLESNGHWASSRPL 73 Query: 62 EVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLL 121 K S + F Q SG + + QD R + GD + D +RP S + +L+ Sbjct: 74 SHKLSLEEHFQIEIQRSGTSHLTQDGRTAFLRQGDFCIFDMARPVSWSFDNDYSLFKILI 133 Query: 122 PRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMN-NPALSETESEAALQAMVCLL 180 PR L + + + A + + L + + + ++ ++ ++ L+ Sbjct: 134 PREKLASRLGNTQNLTARAIRGNSITGSLVYSFVMRYIPFLDSMPPQHAQQLADILLNLI 193 Query: 181 RPVLHQRESVQPR----RERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFAD 236 + P R F ++ ++ + L A G+SVR L +F + Sbjct: 194 TSAFSEFSIATPPQSLGRSTLFYFAQHYLEQHLSDPDLSVNECANACGISVRYLQMLFKE 253 Query: 237 KGLVVAQYIRNRRLDFCADAIRHA-ADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGE 295 + V ++I +RL+ A+ + ++ + + + GFSD S+ S FK F MTP E Sbjct: 254 QNTSVLRWIYQKRLENYKAALVNPLLAEKNITQLAYECGFSDISNLSRKFKSEFFMTPSE 313 Query: 296 YRR 298 YR+ Sbjct: 314 YRK 316 >UniRef50_A2SKZ3 Transcriptional regulator, AraC family n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SKZ3_METPP Length = 325 Score = 198 bits (503), Expect = 2e-49, Method: Composition-based stats. Identities = 67/302 (22%), Positives = 126/302 (41%), Gaps = 6/302 (1%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLLT-ERYTGVLDTHFAKGLKLSTVTTSGV---NLSRT 59 +W + ++ +R+ + L ++ +T+ G +++R+ Sbjct: 13 PPGQRVARWTEAASDRFVESRFKVQDPDRFVASMLHRDLAELSVTRITSVGHGFKHITRS 72 Query: 60 WQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISL 119 ++V + + +F QL G + Q R+ ++ G + D RP L +E +Q L Sbjct: 73 QRQVARAHEDFFLVSVQLEGSCWIAQGGRETRLAPGQFAIYDTRRPYELLLEEDYQQAVL 132 Query: 120 LLPRTLLEQYFPHQKPICAERLDADLPMV-QLSHRLLQESMNNPALSETESEAALQAMVC 178 +P L P A+ + A +L H++ + +EA L A+ Sbjct: 133 RIPCATLMARAPDCDAQTAQAISAASSSARRLIHQVREACRGTRLSRPALAEALLGAVGG 192 Query: 179 LLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKG 238 LR R + R ++ + ++ + L IA G+S L+++F +G Sbjct: 193 GLRGDADSRAATPHSRRTLLARIKAHVVAHLGDPQLSVPGIAATLGLSTSYLHQLFRSEG 252 Query: 239 LVVAQYIRNRRLDFCADAIRHA-ADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 + ++I +RL C A+ A L I + GFSD +HFS F+QR+G +P EYR Sbjct: 253 STLERWIWAQRLAACERALIDPRAARHTLTQIAYSHGFSDAAHFSRSFQQRYGASPREYR 312 Query: 298 RK 299 + Sbjct: 313 KS 314 >UniRef50_A2SJ73 Transcriptional regulator, AraC family n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SJ73_METPP Length = 368 Score = 198 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 71/301 (23%), Positives = 131/301 (43%), Gaps = 7/301 (2%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLLT-ERYTGVLDTHFAKGLKLSTVTTS--GVNLSRTW 60 A +F W + +++ R + ER+ + G +++ +T++ G+ +R Sbjct: 50 APSKQFDCWRDFVIDAHLHWSIRPIRCERFPAFIRQGRFDGFRVTHLTSAQGGIVGTRGA 109 Query: 61 QEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLL 120 +E+ +A + ++ G + D+ ++ + G L D++RP + +QI+L Sbjct: 110 REMAQDSEALYNLIYIAEGSICLVIDDEELTLTPGSFALWDSARPMTFITGAGLRQITLA 169 Query: 121 LPRTLLEQYFPHQKPICAERLDADLPMVQL-SHRLLQESMNNPALSETESEAALQAMVCL 179 +P+ L+ P R A + +L L+ L + L A V L Sbjct: 170 VPQRELQLALPRAGEFVGRRFAATSGLSRLFVDHLISLDARFGELPRGNAGHVLHASVEL 229 Query: 180 LRPVLHQRESVQPRRERQ--FQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADK 237 L L + R + Q V+ ID ++ + L +A + G++ R L+R+F Sbjct: 230 LASTLSAQAEPCAGRSGKIVLQGVMAYIDRHLDDPELDTRRVASDCGITERHLHRLFERA 289 Query: 238 GLVVAQYIRNRRLDFCADAIRHAAD-DEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEY 296 A +IR +RLD C +R A + I + WGF D S FS +FK+ F +P +Y Sbjct: 290 DTTAAAWIRRQRLDRCRQDLRAAETAHLSITQIAYRWGFGDSSSFSKIFKREFASSPKDY 349 Query: 297 R 297 R Sbjct: 350 R 350 >UniRef50_UPI0001AF1428 AraC family transcription regulator n=1 Tax=Streptomyces ghanaensis ATCC 14672 RepID=UPI0001AF1428 Length = 325 Score = 198 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 69/306 (22%), Positives = 131/306 (42%), Gaps = 12/306 (3%) Query: 4 AVDNEFQQWLSQINQV-CGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 + W + N ++ + + L+++ + ++ RT + Sbjct: 12 PPAERWDLWQDVATRTHVPNLLRSERSDDFRATMRVLPLGELQIAELDLPQLDTVRTPRT 71 Query: 63 VKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSK---QISL 119 ++ D + QL+G M QD + GAG + + D+S P + +S+ + + Sbjct: 72 IRRFDPEVYQVNCQLAGDGGMAQDGNESVFGAGHLVVADSSLPYDVRINRTSERTTTVVV 131 Query: 120 LLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNP-----ALSETESEAALQ 174 +PR L + + A + D M +R L + A + T + Sbjct: 132 SVPRARLPLPPRAVRRLLAVPVPVDRGMGGTLYRWLADVARRAEEFTEADAPTLASVTTD 191 Query: 175 AMVCLLRPVLHQRESVQP--RRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYR 232 + C+L L +++ P RR ++ ID N+ + L P +A G+SVR L++ Sbjct: 192 LLACVLGGCLDSEDALPPESRRRALHTRIRDFIDQNLGDPSLSPATVAAAHGISVRHLHQ 251 Query: 233 MFADKGLVVAQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGM 291 +FA +G A ++R+RRL+ C + + I WGF+D + FS VF++ +GM Sbjct: 252 LFAAEGEAPAAWVRHRRLERCRRDLADPRLRGRSVRSIAARWGFTDPATFSRVFRRAYGM 311 Query: 292 TPGEYR 297 TP ++R Sbjct: 312 TPTDHR 317 >UniRef50_Q7CU51 Transcriptional regulator, AraC family n=1 Tax=Agrobacterium tumefaciens str. C58 RepID=Q7CU51_AGRT5 Length = 347 Score = 197 bits (502), Expect = 3e-49, Method: Composition-based stats. Identities = 64/297 (21%), Positives = 128/297 (43%), Gaps = 8/297 (2%) Query: 6 DNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKG 65 + W IN + + + +D F + L +S + R+ ++ Sbjct: 24 RDAMGLWRDSINVLFDARLRSSQDDGFFASVDAAFIGNVALGRTQSSAQDFDRSRNKLAR 83 Query: 66 SDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTL 125 F F SG+++ + + G GD+ ++D ++P + +SL++PR L Sbjct: 84 DGMDGFLLQFYASGKSMSRRGTGE-TAGPGDLYIIDMAQPLA-TATTDHDHLSLVVPRRL 141 Query: 126 LEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN-PALSETESEAALQAMVCLLRPVL 184 LE L A LP+V L + + ++ + A + ++ L + Sbjct: 142 LEGRLIGSGNHHERVLPAGLPLVSLLRETMTSIYRHFDVMNANDGAATVSPLLELATAAI 201 Query: 185 HQR---ESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVV 241 + ++ Q + + ID+++ + L E + GE G+S R++YR+F G Sbjct: 202 NNHVREDNAQGVQRALRASIRRYIDNHLLDPALSVEKVMGEFGVSRRTVYRLFEPLGG-F 260 Query: 242 AQYIRNRRLDFCADAIRHA-ADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 + I +RRL+ D +R + +A + +GF++ +FS VFK+ FG++P + R Sbjct: 261 SACITHRRLERAMDFLRAPQSSHMTIADVAAAYGFTNPENFSRVFKKTFGLSPRQIR 317 >UniRef50_UPI0001B554AB AraC family transcription regulator n=1 Tax=Streptomyces sp. SPB78 RepID=UPI0001B554AB Length = 336 Score = 197 bits (501), Expect = 4e-49, Method: Composition-based stats. Identities = 62/315 (19%), Positives = 119/315 (37%), Gaps = 19/315 (6%) Query: 6 DNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKG 65 F+QW + + + V+ + + + + + RT + ++ Sbjct: 8 SESFEQWRETMRHTRAAELTSEHADTFAAVVHQTHVGPVSVLKTSFPSIQVRRTQRMIRR 67 Query: 66 SDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQE---------SSKQ 116 D ++ SG+ ++E + AG++ L+ + +P ++ Sbjct: 68 CDQELYHLTLLTSGRGLVETGGAPQPLTAGNLHLVASPQPYDARFRGEPAAGGERAHVDG 127 Query: 117 ISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLL-----QESMNNPALSETESEA 171 + + LP ++L +P+ L AD L L Q ++ P + S A Sbjct: 128 VGVDLPMSMLPLPARRVRPLLGRALPADRGAGVLLATFLTGLAAQAALLRPGEAARLSTA 187 Query: 172 ALQAMVCLLRPVLHQRESVQP--RRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRS 229 + + L L S+ P R+ +V + I N+ L P +A +S+ Sbjct: 188 TVDLLSAWLAGQLDIEGSLPPQTRQAVMLHRVKSFIHQNLHHPDLTPSVVAAAHHVSLSY 247 Query: 230 LYRMFAD--KGLVVAQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFK 286 L+R F +G +A +IR +RL + A D + + G S F+ FK Sbjct: 248 LHREFTRDSQGETLAAFIRRQRLAKAYRDLADPALHDLPVHVVAARCGIPQASVFTRAFK 307 Query: 287 QRFGMTPGEYRRKFR 301 GMTP ++RR+ R Sbjct: 308 ATHGMTPSDHRRRAR 322 >UniRef50_D0LBE5 Helix-turn-helix-domain containing protein AraC type n=1 Tax=Gordonia bronchialis DSM 43247 RepID=D0LBE5_GORB4 Length = 342 Score = 197 bits (500), Expect = 5e-49, Method: Composition-based stats. Identities = 57/300 (19%), Positives = 114/300 (38%), Gaps = 14/300 (4%) Query: 10 QQWLSQINQVCGNFT-----GRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVK 64 + W ++ + + + A L LS V + RT + Sbjct: 34 ELWSQTLDSTYCEMDVVWPGSPVGAADFGAEIVARQAGELSLSVVRADPHTVVRTPAMIA 93 Query: 65 GSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRT 124 G+A + Q + G +DAS P ++ + +Q+ + +PR Sbjct: 94 SDPGDDLLLCLITRGRASIVQQGHSGVLSDGSFGFVDASMPFTVAGETPFEQVVVRIPRA 153 Query: 125 LLEQYFPHQ--KPICAERLDADLPMVQLSHRLL-QESMNNPALSETESEAALQAMVCLLR 181 L P + + +++ RLL +M++ L E A++ ++ Sbjct: 154 TLAGRLPAAVVDDSLGRSISGTEGIGRVASRLLVDLAMHDDRLDEGSWAGVATAVLEVVS 213 Query: 182 PVLHQRESVQPRRERQ----FQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADK 237 + Q + ++ + ++ +I + + E GMSVR ++++F+ Sbjct: 214 ASVQQCSTHLSATQQSHTDDLSAIQRVLLRDIADPDRTLADVGAELGMSVRYIHKLFSAS 273 Query: 238 GLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 G ++ RRLD + + + A + GF D SHFS F+++FG++PG YR Sbjct: 274 GTTPRAWLYARRLDRARTLLLQS--EITCANLSEQLGFRDVSHFSRAFRKQFGISPGRYR 331 >UniRef50_C0N2M9 Transcriptional regulator, AraC family protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N2M9_9GAMM Length = 343 Score = 196 bits (499), Expect = 6e-49, Method: Composition-based stats. Identities = 57/300 (19%), Positives = 134/300 (44%), Gaps = 8/300 (2%) Query: 8 EFQQWLSQINQVCGNFTGRLLTE--RYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKG 65 + I + N Y +L + + ++LS + ++ + L R QE Sbjct: 38 RLEWLKEVIGKEYANVDITPPNTMPLYNDMLIYPWQQDMRLSPIQSNAITLERLDQEPTE 97 Query: 66 SDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTL 125 ++ V SGQ +EQ R+V + G+++ DA++ + E +I + +PR L Sbjct: 98 IAQDCYFAVLLTSGQYKLEQGGREVFLNGGEMSFYDATQSHRITIPEQFSKILISIPRPL 157 Query: 126 LEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN-PALSETESEAALQAMVCLLRPVL 184 L++ + + A +L + + + ++Q ++ +++ + ++ L +L Sbjct: 158 LDKRLNNVGRLTATKLASASGIGAVVASMIQSTVQQLDQMTDVHFQQLSNPILDLFTLLL 217 Query: 185 HQRE----SVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLV 240 + E ++ R ++ I +I+E L ++ G+S+R + +F ++ Sbjct: 218 SENEVELSTLSRHRHFALLQIKQFIHLHIKESSLDAAAVSAGVGLSIRYINNLFYEEQTS 277 Query: 241 VAQYIRNRRLDFCADAIRH-AADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRK 299 + +YI +RL + + + + + GF++ +HFS +F+ R+G++P YR++ Sbjct: 278 LMRYITTQRLALTQSYLSNIIYRNLTITEVAMQCGFNNMAHFSRIFRHRYGVSPRAYRQQ 337 >UniRef50_UPI0001B4CF93 AraC family transcription regulator n=1 Tax=Streptomyces hygroscopicus ATCC 53653 RepID=UPI0001B4CF93 Length = 367 Score = 196 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 63/314 (20%), Positives = 111/314 (35%), Gaps = 19/314 (6%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLLTE-RYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 F W + ++ R E + + + +S + + RT Sbjct: 12 PPSERFAAWRALCDRTTIPMELRSTDEGDFRATMWGVNLGQVMVSGTSVPSLWNHRTPVH 71 Query: 63 VKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCS-LYWQESSKQISLLL 121 ++ SD ++ LSG+ + +GA L S P + + +++ + Sbjct: 72 IRRSDPELYHLQLHLSGETDVRHAGATTTLGARQFMLSCTSGPYEAFVGRGRTDTMTVAV 131 Query: 122 PRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMN-----NPALSETESEAALQAM 176 P +LL + RL + L +L PA + + Sbjct: 132 PPSLLPFPAADLGRLLGRRLSGRTGIGALLADVLVRLGAEHTAYRPADGPRLGTVVVDLL 191 Query: 177 VCLLRPVLHQ-----------RESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGM 225 LL L R + + R ++ N+ L P IA + Sbjct: 192 TALLAHELDGDAEAGAGTTAGRMAPESHRRALVLRIQDFAQRNLHTPDLTPSSIAAAHHI 251 Query: 226 SVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTV 284 SVR L+R+F +G VA +IR +RL+ C + A + I WGFS + FS Sbjct: 252 SVRYLHRLFERQGHTVAAWIRAQRLERCCRDLADPAQSGLPIHAIAARWGFSHAADFSRA 311 Query: 285 FKQRFGMTPGEYRR 298 F+ +G+ P ++RR Sbjct: 312 FRGAYGIPPRDFRR 325 >UniRef50_D0LBD5 Helix-turn-helix-domain containing protein AraC type n=1 Tax=Gordonia bronchialis DSM 43247 RepID=D0LBD5_GORB4 Length = 385 Score = 195 bits (497), Expect = 1e-48, Method: Composition-based stats. Identities = 48/297 (16%), Positives = 107/297 (36%), Gaps = 10/297 (3%) Query: 10 QQWLSQINQV-CGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDD 68 +W + + + C L +S++ + R+ ++ Sbjct: 38 DEWRNTLGSLYCEMDVAWPKGNGLDAEWGGRPFGDLHVSSIRCEEQTVIRSPAMIRSDPT 97 Query: 69 AWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQ 128 F G + Q R + G L+ P + ++ +Q+ + +P ++ Sbjct: 98 EDFLVCLITDGSVEVTQAGRATLLRPGGFAFLELGEPFVFHSPDTFRQVVVRVPGRMMSG 157 Query: 129 YFPH--QKPICAERLDADLPMVQLSHRLLQESMNNP-----ALSETESEAALQAMVCLLR 181 P+ + LL + N A S + + + + + + Sbjct: 158 RLPNSYAHRFTGREFAPTSRPAGIVGTLLTQIANADAPIPRAASTSFATSVVDMLTTTIM 217 Query: 182 PVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVV 241 L + R + ++ +I DN+ + +A + GMS R++ ++ A G Sbjct: 218 AELPAEHRKESFRSQDLARIQQVIADNLHDADFSLSDLAAQAGMSARNVQKLVATTGNSP 277 Query: 242 AQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRR 298 ++ R++ + + +A + GF D SHFS +F+++ G++PG YRR Sbjct: 278 MAWLYAARIERAKHLLMSTG--QSVAEVSECVGFRDVSHFSRMFRKQVGVSPGRYRR 332 >UniRef50_B9BG93 Transcriptional activator FeaR n=1 Tax=Burkholderia multivorans CGD1 RepID=B9BG93_9BURK Length = 330 Score = 195 bits (496), Expect = 1e-48, Method: Composition-based stats. Identities = 66/279 (23%), Positives = 117/279 (41%), Gaps = 6/279 (2%) Query: 26 RLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQ 85 + T ++G + + + V + + GSD A + Q G +++ Sbjct: 43 PIGTTPFSGSITCGAVGAARFARVAATPSVYRGQPRL--GSDIAPLFVALQTHGDSLLGD 100 Query: 86 DERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADL 145 RQ+++ G+ T+ DA P ++ Q + I + +P + Q Sbjct: 101 GVRQIRLLPGEWTVFDARCPFTISSQHCMELIFVNVPGLIPAQPPRQPLIYPTFEPSGTS 160 Query: 146 PMVQLSHRLLQESMNNPA-LSETESEAALQAMVCLLRPVLH-QRESVQPRRERQFQKVVT 203 ++ L+ + + +++ + L Q E Q + V+ Sbjct: 161 GSARMFSDLVVSLFRELENVDSNIAISSVDLLRNLFSDAFRIQCPWPAQPLETQRRAVLQ 220 Query: 204 LIDDNIREEILRPEWIAGETGMSVRSLYRMFADKG-LVVAQYIRNRRLDFCADAIRHAAD 262 I++++ + L P IA GMS+R ++R+F G V +YI RR+ C++ +R A+ Sbjct: 221 FIEEHLSDPELSPPSIASALGMSIRQVHRLFKRAGSQTVGEYIWKRRIQRCSEELRSGAN 280 Query: 263 D-EKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKF 300 + I F WGFS HFS FK+ GMTP EYRR F Sbjct: 281 AALSVTTIAFRWGFSSSPHFSRAFKKEMGMTPSEYRRNF 319 >UniRef50_A6W014 Helix-turn-helix-domain containing protein AraC type n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W014_MARMS Length = 306 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 62/293 (21%), Positives = 124/293 (42%), Gaps = 8/293 (2%) Query: 9 FQQWLSQINQVCGNFTGRLLTER--YTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGS 66 + + S+I +VCG F + G + T + V + V + R + ++ Sbjct: 14 VEMFTSEIRKVCGQFDVEPKSRTGMIDGGITTERFGTFDTAIVDINSVQIKRDKKAIRQD 73 Query: 67 DDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQES-SKQISLLLPRTL 125 +F+ + Q G + ++Q+E ++ GD+ L+D+ +P + S+QIS +PR Sbjct: 74 PGEYFFLLVQDLGCSHVQQEENITKLRPGDMFLVDSVKPSIFQYDNHRSRQISFHIPRDE 133 Query: 126 LEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPVLH 185 F + + D P+ H +L++ + + + A +++ + Sbjct: 134 AMHRFGNIG-YGGINISRDDPLWLAIHSVLRKMITADDVHQQSLGDAFLSLISAYLHTTY 192 Query: 186 QRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYI 245 ++P E+ K + LID + P +A +S R+L R F G I Sbjct: 193 NVSHIEP-NEQLLSKALALIDKHCLNASFSPRDVAYHLNISERTLQRHFQVLGETPRHRI 251 Query: 246 RNRRLDFCADAI---RHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGE 295 N+RL+ + + +E + I + GF+D S+F F++++ TPG Sbjct: 252 INKRLEHAHTRLCLRKDGGLNESVTDIALNSGFNDLSYFYREFRKKYHTTPGA 304 >UniRef50_UPI0001B588BC AraC family transcriptional regulator n=2 Tax=Streptomyces RepID=UPI0001B588BC Length = 338 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 59/301 (19%), Positives = 107/301 (35%), Gaps = 8/301 (2%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLLTE-RYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 W ++ RL G + + L++S V + R+ + Sbjct: 12 PPGERAGYWHELVSGTFIPLDVRLHEPVPSAGTITSRSLGPLQISEVEAGPQTVDRSARR 71 Query: 63 VKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLP 122 + + + Q G A + QD RQ + G T DA RP ++ + + + Sbjct: 72 IAQGGEEYLTVTLQHRGTARLTQDGRQALVEPGSFTCSDAGRPYRREQHDAFRFTAFRVH 131 Query: 123 RTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAAL-----QAMV 177 +T L + D L L A + + L + Sbjct: 132 KTSLGVSDDDLRAATGTLFDGVSGTSGLVAAFLGRLARQAAGFDPHTGHRLALTASDLLA 191 Query: 178 CLLRPVLHQRESVQPRRER-QFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFAD 236 L+R + + P R +V + ++ + L PE +A +SVR L+R+F Sbjct: 192 LLVRERRGRLDPQAPEHARAMLTRVQEYVLLHLGDPGLCPERVAAAHHVSVRYLHRLFHA 251 Query: 237 KGLVVAQYI-RNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGE 295 +G + +++ R R + R + + WGF SHFS F+ +GM+P E Sbjct: 252 EGTTLGRWVLRERLERCRRELARPGRAGPAVGAVAQRWGFVSPSHFSRAFRAAYGMSPRE 311 Query: 296 Y 296 + Sbjct: 312 W 312 >UniRef50_Q0SCE6 Transcriptional regulator, AraC family protein n=1 Tax=Rhodococcus jostii RHA1 RepID=Q0SCE6_RHOSR Length = 306 Score = 195 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 57/294 (19%), Positives = 114/294 (38%), Gaps = 4/294 (1%) Query: 10 QQWLSQINQVCGNFTGRLLTER-YTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDD 68 W ++ G RL ++ TG + ++ T++ + LSR+ + + + Sbjct: 6 DSWSEIMSTEFGGLAPRLASDAPVTGAMQAVLLGNVEAFTISGTPQVLSRSPRAARRNPS 65 Query: 69 AWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQ 128 +G+A++ Q +R++ + G + D + P L + ++ + PR Sbjct: 66 ESLKLCAVKTGRAVLHQGDRELVVDRGRAVMYDVALPYELSFTDTWSCSVVTFPRHSFVL 125 Query: 129 YFPHQKPICAERLDADLPMVQLS-HRLLQESMNNPALSETESEAALQAMVCLLRPVLHQR 187 + D L H + + + + A + L+ VL Sbjct: 126 TPNEIRECLERTYDVRAGSGALLEHFVTTAVAEGADVDPSAATLLGDAGMSLVSAVLTAP 185 Query: 188 ES-VQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIR 246 E+ P +++ + N+ + L IA MS R+L R+FAD G ++ IR Sbjct: 186 ETRPAPPSSAVRDQILRHVRRNLADPALSVGSIASALHMSPRTLQRIFADYGHTLSAVIR 245 Query: 247 NRRLDFCADAIRHA-ADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRK 299 RL + + D ++ + +GF D F+ F+ +GMTP + R + Sbjct: 246 RERLASVHRDLTNPNLHDRTISSLASRYGFYDAPAFTRAFRAEYGMTPSDARHQ 299 >UniRef50_A4Q9T5 Putative uncharacterized protein n=1 Tax=Corynebacterium glutamicum R RepID=A4Q9T5_CORGB Length = 308 Score = 194 bits (494), Expect = 2e-48, Method: Composition-based stats. Identities = 69/305 (22%), Positives = 120/305 (39%), Gaps = 6/305 (1%) Query: 1 MNPAVDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTW 60 M F QW + N + ++L + T + T Sbjct: 1 MESIQAYNFTQWRQIVASSFHNVRAAAPAPNFRATAHHKHVGDIELFDMITDPHTVIHTE 60 Query: 61 QEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLL 120 + QL G A + QD R + GD+ L RP L + E + + + Sbjct: 61 GDGSFPLSTMCKFSLQLEGVATLVQDGRSCTMSPGDLALYTGKRPYHLVFDEPQRSLVVY 120 Query: 121 LPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN-PALSETESEAALQAMVCL 179 PR+LL+ I A + D + ++ L ++ N L +++ ++A + L Sbjct: 121 FPRSLLQLRDDQIDMITATPISRDEGLGKIIIPLFEQFARNLDDLQGLHAQSLIRASLDL 180 Query: 180 LRPVLHQRE----SVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFA 235 L V + + F++ + ID+N+ + L P IA +SVR+L+ F+ Sbjct: 181 LVTVFAEHTERMNGELEDSSQLFRRATSYIDENLHDLDLAPGTIADALYVSVRNLHAHFS 240 Query: 236 DKGLVVAQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPG 294 +GL V+ YIR RRL+ + + D + I G D S+ S F+ +G +P Sbjct: 241 SQGLTVSAYIRARRLNAIHADLGNPQMRDFTIQSISARHGLVDASYVSKAFRAEYGESPR 300 Query: 295 EYRRK 299 YR + Sbjct: 301 TYRTR 305 >UniRef50_B2SCD0 Helix-turn-helix, AraC type n=39 Tax=Rhizobiales RepID=B2SCD0_BRUA1 Length = 351 Score = 194 bits (494), Expect = 3e-48, Method: Composition-based stats. Identities = 78/301 (25%), Positives = 134/301 (44%), Gaps = 16/301 (5%) Query: 8 EFQQWLSQINQVCGNFTGRL--LTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKG 65 + QW S + VCGNF + + G G++ + V+ +SR W +++ Sbjct: 47 SYDQWSSDLRSVCGNFNPQTVERGDDVVGAARRIDVCGMEFAHVSNDLDCISRGWDDIRR 106 Query: 66 SDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSK-QISLLLPRT 124 + + QL G +E +RQ + G+ L+D++RP + Y+ +SL LPR Sbjct: 107 DAQEHLFLIVQLEGSCGLEHGDRQNILDVGECILVDSTRPTTFYFGGRFSNHLSLHLPRQ 166 Query: 125 LLEQYFPHQKPI-CAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPV 183 L+ Y + P A +L A PM + H L+ + M S++ S+ Q M R Sbjct: 167 LM--YSDSRIPFDIARKLSAHDPMAHMLHALIAKIMATTE-SDSASQHLRQLMFNATRQA 223 Query: 184 LHQRESVQP------RRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADK 237 H P ++ Q V LID ++ E L W+A G+S+R+L + F Sbjct: 224 FHSTGESAPLHSLHDSASKRLQIVDLLIDRHLTETELSARWLATRLGISIRTLQQDFQGM 283 Query: 238 GLVVAQYIRNRRLDFCA---DAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPG 294 G+ IR++RL + ++ +A + + GF+D S+F+ FK+ F P Sbjct: 284 GVTCTMVIRDKRLRLAKEKIEQLKEQKSGGTIAEVAYSAGFNDISYFNRSFKELFDCAPT 343 Query: 295 E 295 + Sbjct: 344 D 344 >UniRef50_Q0S048 Probable transcriptional regulator n=1 Tax=Rhodococcus jostii RHA1 RepID=Q0S048_RHOSR Length = 285 Score = 194 bits (494), Expect = 3e-48, Method: Composition-based stats. Identities = 51/251 (20%), Positives = 97/251 (38%), Gaps = 9/251 (3%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRL-LTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 +F W ++ + +TG L T L++S V+ V + R Sbjct: 11 PAGEQFDAWRETVSNAFVPLDAKSYTAGTFTGELLTGVVGSLQVSEVSGGAVEVCRMPDA 70 Query: 63 VKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLP 122 ++ SD + Q+ G ++ QD+R+ + GD ++ D RP + ++ Q+ ++ P Sbjct: 71 IRRSDPGYVKLGMQIRGYCVLTQDDREAALIPGDFSIYDTRRPYQVSFEGDFAQLVVMFP 130 Query: 123 RTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNP------ALSETESEAALQAM 176 L+ + A R+ + L +LL P + ++ S L + Sbjct: 131 HELIHLPPDALNDMTARRVSGRRGIGGLVSKLLVGIAEQPRGVEELSANQQLSNGVLNLL 190 Query: 177 VCLLRPVLHQRESVQPR--RERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMF 234 L L +V P R ++ ID + + L IA +S R+L +MF Sbjct: 191 AAALSEQLGCESNVPPETNRAALLLQIKAFIDARLYDPELSSHLIARAHNISPRNLQKMF 250 Query: 235 ADKGLVVAQYI 245 +G ++I Sbjct: 251 EGEGTTATEWI 261 >UniRef50_A6X8D5 Helix-turn-helix-domain containing protein AraC type n=1 Tax=Ochrobactrum anthropi ATCC 49188 RepID=A6X8D5_OCHA4 Length = 340 Score = 194 bits (492), Expect = 4e-48, Method: Composition-based stats. Identities = 71/300 (23%), Positives = 115/300 (38%), Gaps = 9/300 (3%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEV 63 + W V L + + +D A L TV +SG R + Sbjct: 19 PLHQRIPLWRDSATSVWD--VSELTYDSFYANVDAFHAGDLMFGTVRSSGQTTERVKSRI 76 Query: 64 KGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPR 123 ++ F + G+ + R+ GD+ ++D ++P E + L+LPR Sbjct: 77 AVDSLDYYMLQFYVFGKRSAQARGREEIAQQGDLLIVDMTQPLKTVSTE-YQSFDLVLPR 135 Query: 124 TLLEQYFPHQKPICAERLDADLPMVQLSHRL-LQESMNNPALSETESEAALQAMVCLLRP 182 L + RL A P+ L L P ++ ++ A + L Sbjct: 136 RLFDPLLAQPDGYGGSRLAAQEPLTALLRSHVLALYAAGPKMTPAQAMAMQGPTLALAAA 195 Query: 183 VLH---QRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGL 239 VL+ E P R + V I+DN+ + L +A S +LYR+ Sbjct: 196 VLNGVVTEEQAVPVRTAAWLAVRRYIEDNLADLTLSSASVAQHFAFSRATLYRIMEPV-H 254 Query: 240 VVAQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRR 298 + Y+R RRL C D + H A ++ I WGF++ FST+F + FGM P +YR Sbjct: 255 GFSSYVRQRRLYRCRDDLVHPACRHLSVSEIAISWGFANAQTFSTLFSRHFGMPPRDYRE 314 >UniRef50_C5D1Y8 Transcriptional regulator, AraC family n=1 Tax=Variovorax paradoxus S110 RepID=C5D1Y8_VARPS Length = 344 Score = 194 bits (492), Expect = 4e-48, Method: Composition-based stats. Identities = 68/293 (23%), Positives = 110/293 (37%), Gaps = 5/293 (1%) Query: 5 VDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVK 64 F+QW + + E + L + L S R Q Sbjct: 18 PAENFEQWRDGLASLFETVRPDSEREAFRADLTAYNLGSFLLGLSCASPQMFRRDRQLAS 77 Query: 65 GSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRT 124 +SG+ E D + GDI D SR + + + +S+++PR Sbjct: 78 AVGVDHLLVQLYVSGKCEFEADGHAGRGKTGDIVCFDMSRQMN-SRTSTLEMVSVVIPRE 136 Query: 125 LLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMN-NPALSETESEAALQAMVCLLRPV 183 LL + LD + L L P ++ +ES+ A +A L+ Sbjct: 137 LLRLAPRTLDTLHGAVLDGETTFGTLLREHLMSMARVAPRINASESKLAAEATATLISAS 196 Query: 184 LHQ-RESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVA 242 L + Q + + I+ N+ L PE + G+S +LYR F G +A Sbjct: 197 LSGCGPAGSDLVGGSLQAIQSYIERNLNNPALSPEMLMRHFGLSRSALYRTFEALGG-IA 255 Query: 243 QYIRNRRLDFCADAIRHAADDE-KLAGIGFHWGFSDQSHFSTVFKQRFGMTPG 294 +YIR RRLD + ++ + F GFS+++ FS F+QRFG+ P Sbjct: 256 EYIRGRRLDRAFLRLTSVGTGRGSVSKLAFACGFSNETAFSRAFRQRFGVPPR 308 >UniRef50_Q38ZW3 Transcriptional regulator, AraC family n=2 Tax=Burkholderia cepacia complex RepID=Q38ZW3_BURS3 Length = 324 Score = 194 bits (492), Expect = 5e-48, Method: Composition-based stats. Identities = 59/297 (19%), Positives = 113/297 (38%), Gaps = 6/297 (2%) Query: 7 NEFQQWLSQINQVCGNFT-GRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKG 65 W+ + + +E L + + + RT + Sbjct: 20 ERVDFWVDHVARTLVRIECSGKSSEGIDASLRKRDLGLFGACDIVANRHAVVRTSHNIHA 79 Query: 66 SDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTL 125 + +GQ QD +Q G GD+ L D S P + L +PR + Sbjct: 80 DQRDAVFICLMHAGQGYTFQDVDCMQHGPGDLVLYDTSMPYGHGFPADMAMTVLDVPRDV 139 Query: 126 LEQYFPHQKPICAERLDADLPMVQ-LSHRLLQESMNNPALSETESEAALQAMVCLLRPVL 184 E + ++D D + ++ P + E A++ L++ +L Sbjct: 140 FEARVGPWRYRSLVKIDRDDGVASWAVRQVYALLAAPPEPTSDARERRAAAILDLVQSML 199 Query: 185 HQRESVQPRRE---RQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVV 241 R+ + + ID ++ ++ L + ++ +S R L R+F +G+ + Sbjct: 200 RLRDGDASPTKSTVHTLSRAKAFIDSHLADDDLDSQSVSRAINLSPRQLARVFEIEGMPL 259 Query: 242 AQYIRNRRLDFCADAIRH-AADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 +YI RRL+ C +R + ++ I F WGF++ +HFS ++ RFG TP + R Sbjct: 260 TRYILARRLERCRADLRDRSLKHLTVSEIAFRWGFNNSAHFSRSYRARFGETPSDTR 316 >UniRef50_Q0S9V9 Transcriptional regulator, AraC family protein n=3 Tax=Nocardiaceae RepID=Q0S9V9_RHOSR Length = 340 Score = 193 bits (490), Expect = 8e-48, Method: Composition-based stats. Identities = 63/298 (21%), Positives = 115/298 (38%), Gaps = 11/298 (3%) Query: 11 QWLSQINQVCGNFTGRLLTE--RYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDD 68 +W ++ R+ L L +S V + RT + ++ + Sbjct: 34 RWADTLDSTYCEMDVDWPDRHARFAAELTVRPFGDLTVSVVHADPHTVVRTPEMIRSDPN 93 Query: 69 AWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQ 128 + G A ++Q R + G +LD++ P + + +Q+ L PR LL Sbjct: 94 DDYLLCLITRGTATLQQHSRSATLEQGAFGILDSAAPFVVDGRTEFEQVVLRAPRQLLIS 153 Query: 129 YFPHQ--KPICAERLDADLPMVQLSHRLLQESMNNPA-LSETESEAALQAMVCLLRPVLH 185 + + + + M L R L + A LS S + + V LL VL Sbjct: 154 RLSAEAMEGVAGLGISGQTGMGGLVSRFLVDMATTDARLSVGSSASVAASAVELLTSVLT 213 Query: 186 QRESVQPRRERQ----FQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVV 241 ++ +R + V + + + I E GMS+R ++++F+ G Sbjct: 214 EQARPLTATKRVHHDDLRTVQQTMTRYLHDPDHSTAEIGVELGMSLRYIHKLFSLTGTTP 273 Query: 242 AQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRK 299 ++ RLD + D +A I G+ D SHFS F++RFG++P +R + Sbjct: 274 RTWLYQLRLDRARGQLLDT--DSTVAEISDRVGYRDVSHFSRAFRKRFGVSPAHFREQ 329 >UniRef50_B1LTK5 Transcriptional regulator, AraC family n=2 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1LTK5_METRJ Length = 327 Score = 192 bits (489), Expect = 9e-48, Method: Composition-based stats. Identities = 63/302 (20%), Positives = 124/302 (41%), Gaps = 9/302 (2%) Query: 7 NEFQQWLSQINQVCGNF-TGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKG 65 + F+ W RL + + ++ GL + + + T + ++ Sbjct: 14 DRFRLWRDVCEDRLVPMAQDRLNDDPFHATIEGASIGGLVFTKFALRNLRAATTPRTLRH 73 Query: 66 SDD--AWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPR 123 + + LSGQ +Q +R GD ++ D + P ++ S+ +++ +PR Sbjct: 74 ENHKTDHLFMSIVLSGQVRADQYDRSSTDRVGDFSIRDTNTPWTIEHGGYSEVLAIGIPR 133 Query: 124 TLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMN-----NPALSETESEAALQAMVC 178 LE + + DLP L+ L ++ P ++E+ L +V Sbjct: 134 ERLEGALGSARLFAGVTVGGDLPTATLTRSFLGNLLSLGDRLTPQVAESMVSTGLDLIVA 193 Query: 179 LLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKG 238 L L + + Q+ ++ ++ + L P +A G+S+R L +F + Sbjct: 194 SLAERLAREAQQPVQDSVVVQRARAYLEAHLHDPTLDPPRLAAAAGVSLRRLQALFRAQD 253 Query: 239 LVVAQYIRNRRLDFCADAIRHAAD-DEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 +A +I +RRL+ A + L + + GF QSHFS FK+R+G++P +YR Sbjct: 254 RHIADWIWHRRLEAAAKRLADPGCLHMPLGTLAYGCGFLSQSHFSRRFKERYGLSPRDYR 313 Query: 298 RK 299 + Sbjct: 314 MR 315 >UniRef50_A1BAD0 Transcriptional regulator, AraC family n=1 Tax=Paracoccus denitrificans PD1222 RepID=A1BAD0_PARDP Length = 318 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 61/297 (20%), Positives = 111/297 (37%), Gaps = 8/297 (2%) Query: 11 QWLSQINQV-CGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDA 69 W + I + G L+ A + LS + T R ++ + Sbjct: 19 HWSAIIADTYFPLHLSYRDPATFQGRLERRSAGPVSLSRLRTEPARYERVPGLIRQGEAE 78 Query: 70 WFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQY 129 + + Q R + G + P +Q + + + + R L + Sbjct: 79 EYLVTIPSLAPVLFRQLGRDITCAPGGFIIERGDEPYRFAYQARNDLLVMKIARGALAER 138 Query: 130 FPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPVLHQRE- 188 +CA D + L ++ + + + +E ++ + ++ LL L + Sbjct: 139 LRQPDRLCATVFDGRDGLGGLFAETVRRA-HALSDAEGAADVLGRHLIELLALALDHQAE 197 Query: 189 ----SVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQY 244 + R ++ I N+ + L P +A G+S R L+ +F D VAQ+ Sbjct: 198 TDGGAATVVRAAHLKRAQDAILRNLTDPELSPGTVAAACGISKRYLHDLFGDTDATVAQF 257 Query: 245 IRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKFR 301 IR RL D ++ D LA I + +GF DQ+ FS +F+ FG +P YR R Sbjct: 258 IREARLKAARDMLQMPG-DLSLAAIAYRFGFGDQAQFSRLFRAMFGQSPSSYRAACR 313 >UniRef50_C6Q9S8 Transcriptional regulator, AraC family n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6Q9S8_9RHIZ Length = 346 Score = 192 bits (488), Expect = 1e-47, Method: Composition-based stats. Identities = 53/297 (17%), Positives = 110/297 (37%), Gaps = 6/297 (2%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEV 63 A F + I +T + G +++ + V S + +T + Sbjct: 25 AKAEAFSLFRETICTAFMPWTPEFYGRDFVGRVESIDLANGAIGRVRMSPIVAVKTKSNI 84 Query: 64 KGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSL--YWQESSKQISLLL 121 S + +SG+ ++Q GD+ L ++ P +L ++ ++ Sbjct: 85 SHSPIDCIHGNLIISGELKVDQGGTTNIAKRGDLILYESFSPVTLTERPDAPCDNLAFII 144 Query: 122 PRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLR 181 P + + ++ L+ L + + E A QA V LL Sbjct: 145 PTSSFAHSQDIDHKFSNILVPSEKLSGPLAGCLTMLAQSLCTAPIEEIAALFQACVALLP 204 Query: 182 PVLHQRE---SVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKG 238 + + + +++ I N+ + L P +A + G+SVR L+++F G Sbjct: 205 VAIGAPDCVQHPSVPKNYLLSRILDYIGQNLSDPELSPPRVADQFGISVRYLHKLFVQFG 264 Query: 239 LVVAQYIRNRRLDFCADAIRHAADDE-KLAGIGFHWGFSDQSHFSTVFKQRFGMTPG 294 + ++ RL + ++ ++ + + WGF+D S F FK++FG TP Sbjct: 265 TTFSAHVTAERLKRIKWDLEVSSGRRPSISALAYRWGFNDLSTFHRAFKKQFGCTPS 321 >UniRef50_Q2G766 Transcriptional regulator, AraC family n=1 Tax=Novosphingobium aromaticivorans DSM 12444 RepID=Q2G766_NOVAD Length = 312 Score = 192 bits (488), Expect = 1e-47, Method: Composition-based stats. Identities = 64/299 (21%), Positives = 120/299 (40%), Gaps = 10/299 (3%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEV 63 A + + W ++V + E ++G + + L + ++ + RT + Sbjct: 13 APQDRARYWNEIADRVFTGTFVNVPGEDFSGRMLSWRVGELDMIRTDSTHSGVGRTP--I 70 Query: 64 KGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPR 123 DD Q G + Q + + + GD L P S+ + + + PR Sbjct: 71 AQ-DDERLILHLQCRGTSQHMQKQAECALEPGDFVLASPHIPYSIKLTGH-EMLVVEFPR 128 Query: 124 TLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNP--ALSETESEAALQAM---VC 178 L + FP +R+ P ++ H L A + E E + A+ + Sbjct: 129 APLAERFPGVDDALLQRMCGASPGGRVFHDFLLSLWQQGERAAEDPEWEVGVNAVFYDLA 188 Query: 179 LLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKG 238 + QR + + +KV+ ++ ++ + LR IA +SVR++ +FA G Sbjct: 189 AMAMRGAQRPNAEVGEADLRRKVLAMVSSSLEDPALRTASIADACNISVRTVQNVFAAMG 248 Query: 239 LVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 YI +RL AD + D + I F GF+D ++F+ F+Q+FG P ++R Sbjct: 249 TTPTAYILEQRLRRAADRLV-GRPDASITEIAFELGFNDSAYFTRCFRQQFGAAPRDWR 306 >UniRef50_B0SW51 Transcriptional regulator, AraC family n=1 Tax=Caulobacter sp. K31 RepID=B0SW51_CAUSK Length = 338 Score = 192 bits (488), Expect = 1e-47, Method: Composition-based stats. Identities = 65/297 (21%), Positives = 114/297 (38%), Gaps = 10/297 (3%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEV 63 + + ++ R ++ + + L T G + RT + + Sbjct: 26 PPEERHDYYRREVLSA---LDARDPEPGFSANITSLRLGSLAFYVTETGGHTMFRTPEMI 82 Query: 64 KGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPR 123 + F ++G + D G G++ + D SRP L+ + K +S LPR Sbjct: 83 AADGRDHYIVQFNIAGSHTGDFDGVPFSAGPGEVGICDLSRPMLLHST-AVKVLSTFLPR 141 Query: 124 TLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPV 183 ++ P + + LDA+ L L + P L +A + LL Sbjct: 142 AEVKAVAPDIE-LHGMVLDANR-AGLLIEHLASVTRWFPRLLPETLPGITRATIELLGAC 199 Query: 184 L---HQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLV 240 L R R + ++ N+ E L P I+ G+S +LYR+F G Sbjct: 200 LVMEASRADFGVRESPVLMRARAYVEHNLLEPTLNPAKISEALGVSRSTLYRLFEPLGG- 258 Query: 241 VAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 V Y+ +RRL A+ +++ I F GFS ++HFS F++ F + P + R Sbjct: 259 VTAYVWDRRLHLARAALLDPKRARRISEIAFQCGFSSEAHFSRSFRKAFNIRPSDLR 315 >UniRef50_UPI0001B58708 AraC family transcription regulator n=1 Tax=Streptomyces sp. C RepID=UPI0001B58708 Length = 328 Score = 192 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 69/305 (22%), Positives = 126/305 (41%), Gaps = 15/305 (4%) Query: 8 EFQQWLSQINQVC--GNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKG 65 ++ W S +Q FTG L + L+ + + +R ++ Sbjct: 16 RYESWESMASQSLFRSRFTGPHL-HDFLARSSALDLGNLQTFAQSLPPLEANRPPALIRQ 74 Query: 66 SDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQ----ISLLL 121 +D + G + Q R V G GD L D+SRPC + + Q + + + Sbjct: 75 ADPEVVHLWLTRRGLLGLSQSGRDVMAGEGDFVLYDSSRPCRGFAKAPDGQDIAGVIVQV 134 Query: 122 PRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN-PALSETESEAALQAMVCLL 180 PR LL + + R+ + + L L + M + P+ + ++ A + LL Sbjct: 135 PRALLPLHPNTLDALTITRIPGNTAIGTLLRTYLTDLMAHAPSYGKADAPRLGSATLDLL 194 Query: 181 RPVLHQRE------SVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMF 234 +L + +++ R ++ I + E L P IA +SVR L++++ Sbjct: 195 TVLLARTARDGRCLTLEARHTALRARIGHFIQQRLAEPDLTPASIAAAHRISVRYLHKLY 254 Query: 235 ADKGLVVAQYIRNRRLDFCADAIRHAADDEK-LAGIGFHWGFSDQSHFSTVFKQRFGMTP 293 D + V+ IR+ RL+ + + ++ I WGF + +HFS F+ +G+TP Sbjct: 255 QDDRMTVSALIRHTRLERIRRDLSDPRLGARCVSAIAARWGFPEPAHFSRAFRSAYGVTP 314 Query: 294 GEYRR 298 EYRR Sbjct: 315 SEYRR 319 >UniRef50_A8ICM9 Putative transcriptional regulator n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8ICM9_AZOC5 Length = 346 Score = 192 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 70/302 (23%), Positives = 126/302 (41%), Gaps = 8/302 (2%) Query: 6 DNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKG 65 +F ++ + + + + + G+ + S + R+ +++ Sbjct: 24 AEQFGRYHDHMAPIYDVAAEENGKAGFAADMTAYHLGGMLVGASGFSDHAIGRSKRKIAR 83 Query: 66 SDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTL 125 +D +G + + V++ AGDI+L+D RP ++S+ + ++LPR+ Sbjct: 84 TDMDHLLVQLHKTGGLDADAEGNVVRVRAGDISLIDLGRPMD-GHAKTSQTLDVILPRSQ 142 Query: 126 LEQYFPHQKPICAERLDADLPMVQLSHR-LLQESMNNPALSETESEAALQAMVCLLRPVL 184 L +K L D M + LL + A + ++ +A L+ Sbjct: 143 LPDLAQRRKTPHGAVLSGDSLMGGILGDFLLSLARRLDAATPRDAGLLTRAAADLITTCF 202 Query: 185 HQRESVQPRRERQF----QKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLV 240 V +E ++ ID N+ + L P +A E MS SLYR+F +G Sbjct: 203 QSETGVAAAQEGLLLAASERARRYIDANLSKAELVPVRVARELRMSRSSLYRLFEAEGG- 261 Query: 241 VAQYIRNRRLDFCADAIRHAAD-DEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRK 299 +A+YIR RRL + H A ++ I F GFS ++HFS F+ F M P E R++ Sbjct: 262 IAKYIRTRRLTTALYLLTHPAHAGMRIGEIAFRCGFSSEAHFSRAFRSEFDMKPSEARKR 321 Query: 300 FR 301 R Sbjct: 322 AR 323 >UniRef50_Q82RS6 Putative regulatory protein n=1 Tax=Streptomyces avermitilis RepID=Q82RS6_STRAW Length = 358 Score = 192 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 72/307 (23%), Positives = 125/307 (40%), Gaps = 12/307 (3%) Query: 4 AVDNEFQQWLSQI-NQVCGNFTGRLLTERYTGVLDTHFAK-GLKLSTVTTSGVNLSRTWQ 61 F + + + + + ++ G+ +S+V + R+ + Sbjct: 37 PAAERFSWFCELVARDMAPHDIVTEHVQDFSASATLLSLGEGIGVSSVAFPAMQSIRSRR 96 Query: 62 EVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPC--SLYWQESSKQISL 119 ++ SD + + G EQ QV GD+ L D+S+P S+ + ++ I L Sbjct: 97 LIRRSDPELWVLALVVKGAMQREQGRNQVNPRPGDLVLYDSSQPYWASIATDDVAQSIVL 156 Query: 120 LLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN-PALSETESEAALQAMVC 178 LPR + + + A L + + L +LL + P L ++ A+V Sbjct: 157 HLPRRTVPVPEQALRRMVATALPSRTGIGALLSQLLGGLVEQGPKLEAGQTGRVASAVVD 216 Query: 179 LLRPVL------HQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYR 232 L L ++ RR Q ++ + I + E L P +A +S+R+L Sbjct: 217 LTTAFLAGLSGADGPQTTAARRVAQLHQIKSFIRSRLGEPGLTPTAVAAAHHISLRALQY 276 Query: 233 MFADKGLVVAQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGM 291 +F + G V +IR +RL+ C + +A I GF D + FS FK R+GM Sbjct: 277 LFREDGRTVGAFIREQRLERCRAGLADPRLAGHSVAAIAVRAGFCDAAAFSRAFKARYGM 336 Query: 292 TPGEYRR 298 PGEYRR Sbjct: 337 PPGEYRR 343 >UniRef50_A9BNP3 Transcriptional regulator, AraC family n=3 Tax=Comamonadaceae RepID=A9BNP3_DELAS Length = 314 Score = 192 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 67/303 (22%), Positives = 113/303 (37%), Gaps = 12/303 (3%) Query: 2 NPAVDNEFQQWLSQINQVCGNFTGRLL------TERYTGVLDTHFAKGLKLSTVTTSGVN 55 + + F W + + C + L L++S ++ Sbjct: 9 SQEPRHRFDYWHEVVCRHCIPADSHRAQGDAAGPGGFGATLSVRSLGLLEISAMSAPSHR 68 Query: 56 LSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSK 115 R ++ + + L GQA + Q + ++ AG++ L DAS+P Sbjct: 69 WVRNAAHLRLHARDELWLGYLLQGQAEVRQGGQVARLSAGNLVLYDASQPFEFSVA-PRD 127 Query: 116 QISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQA 175 + + +PR+ L F L P V +L E++ P ++ A Sbjct: 128 ILLMRIPRSELLNRFARAPLHAGRVLHGHAPAVAPLRAMLGEAIAMPPAPHGDALAQRFG 187 Query: 176 MVCLLRPVLH---QRESVQPRRERQFQ-KVVTLIDDNIREEILRPEWIAGETGMSVRSLY 231 M L L Q +VQPR ER ++ I DN+ L +W+A + +S R++ Sbjct: 188 MALLDVLALALEMQEMAVQPRAERDLHGRIQAFIQDNLGSPELSLQWLAQQHNVSPRTVT 247 Query: 232 RMFADKGLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGM 291 R FA + + RL A+ + F GFSD +HFS F++ FG Sbjct: 248 RAFARRNQTPMGLVWQLRLQASRQALMQGRCS-SVTEAAFAHGFSDAAHFSRAFRKAFGC 306 Query: 292 TPG 294 TP Sbjct: 307 TPR 309 >UniRef50_B5HV97 AraC-family transcriptional regulator n=2 Tax=Streptomyces RepID=B5HV97_9ACTO Length = 338 Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats. Identities = 60/311 (19%), Positives = 122/311 (39%), Gaps = 15/311 (4%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEV 63 + F +W + + + + + G + + + ++ R+ + V Sbjct: 26 PAEERFDRWRELVGRTRSSESVSAHAADFWGDIRLLELGPVTVMRMSFLPTRFRRSPEMV 85 Query: 64 KGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLL--- 120 + SD ++ L G+ +E R + G D+ L+++SRP L + ++ ++ Sbjct: 86 RRSDPELYHLSLLLDGELGLEHAGRNSRFGPHDLHLVESSRPYDLGPTDDRERRAVKGVG 145 Query: 121 --LPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLL-----QESMNNPALSETESEAAL 173 P+ LL + + L + L L Q PA + L Sbjct: 146 VDFPKALLPLPPHRVHELLGQGLPGQEGVGALLAEFLVGLARQAETLQPADARRLGTVVL 205 Query: 174 QAMVCLLRPVLHQRESVQP--RRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLY 231 + ++ ++ P R++ ++++ I N+ + L P IA +S+ L+ Sbjct: 206 DLLAAWFAQLMDTEAALSPETRQKVTVERILAFIRQNLHDPELTPPVIAAAHHISLSYLH 265 Query: 232 RMFAD--KGLVVAQYIRNRRLDFCADAIRHAADD-EKLAGIGFHWGFSDQSHFSTVFKQR 288 R+F +G VA +IR RRL+ + + + I WGFS S F+ F+ Sbjct: 266 RIFQQRSQGETVAAWIRKRRLEGARRDLADPSLHGTPIHAIAARWGFSRASDFTRAFRAV 325 Query: 289 FGMTPGEYRRK 299 G +P E+R + Sbjct: 326 HGQSPREFRLR 336 >UniRef50_C9NEM0 Transcriptional regulator, AraC family n=1 Tax=Streptomyces flavogriseus ATCC 33331 RepID=C9NEM0_9ACTO Length = 323 Score = 190 bits (484), Expect = 4e-47, Method: Composition-based stats. Identities = 71/298 (23%), Positives = 124/298 (41%), Gaps = 9/298 (3%) Query: 9 FQQWLSQI-NQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSD 67 W ++ ++ GR + L ++L ++ V LSRT V+ + Sbjct: 14 LAAWQREVGLRLAAVKAGRRQDGPFEASLTGVPLGYVRLLSLEADPVRLSRTPGLVESAP 73 Query: 68 DAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLE 127 V Q G A + QD R + G ++D RP SL +E + L +P L+ Sbjct: 74 ARAVAVVLQEHGHAALTQDGRSTVLEPGQAAVVDLRRPFSLDERERFRLRVLRVPDHALD 133 Query: 128 QYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPA-LSETESEAALQAMVCLLRPVLHQ 186 + + L + L LL + + ++A LL ++H Sbjct: 134 VPAHSVRGVTGRALSPRDGVPALLVPLLARLAVTAGRIPPSVADALGGNTTDLLATLVHD 193 Query: 187 RESVQ------PRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLV 240 R+R + V+ ID ++ + L PE IA +SVR L+R+F D+ + Sbjct: 194 ASDPDDDDHAGAARDRLVRSVLRHIDRHLGDPDLGPESIAAAHRISVRYLHRLFEDEAVT 253 Query: 241 VAQYIRNRRLDFCADAI-RHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 V++ ++ RR++ CA + R + ++ + WGF +HFS FK +G PG +R Sbjct: 254 VSRLVQRRRVEECAKELARRGSVSATVSAVSSRWGFHSPAHFSRAFKALYGHPPGRWR 311 >UniRef50_C8NQI1 AraC-type transcriptional regulator n=4 Tax=Corynebacterium RepID=C8NQI1_COREF Length = 335 Score = 190 bits (484), Expect = 4e-47, Method: Composition-based stats. Identities = 71/307 (23%), Positives = 127/307 (41%), Gaps = 13/307 (4%) Query: 5 VDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTH-FAKGLKLSTVTTSGVNLSRTWQEV 63 D +QW + + R + R +T+ ++L+ V + + R+ + + Sbjct: 26 PDYRVEQWEAHNARALIPLDIRTIDGRPMHSEETNLHLPSMRLARVFGTSQIVERSEKFI 85 Query: 64 KGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPR 123 + F G + V + G L DA +P + ++ L + + Sbjct: 86 NDNPTGMMAIFFATEGDSFFFDRGGHVSLRPGQALLYDADQPFLRGFNHGFRENVLTISK 145 Query: 124 TLLEQYFPHQK---PICAERLDADLPMVQLSHRLLQESMNNPALSETES-----EAALQA 175 P P+ E P Q RL++ +++ L+ S Sbjct: 146 ERFRDVAPRSGLKLPMVFEFGPGGSPAEQALGRLVKTTLHRLQLTHVTSTDLPLPGGEDK 205 Query: 176 MVCLLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFA 235 ++ LL P+L + + F + ID ++ L P+ IA G+S R L R+F+ Sbjct: 206 VISLLGPILGSSPNTE---ASLFSLARSYIDLHLTNRHLTPQEIAAAAGVSERHLSRIFS 262 Query: 236 DKGLVVAQYIRNRRLDFCADAIRHAADD-EKLAGIGFHWGFSDQSHFSTVFKQRFGMTPG 294 +G V +YI NRRL F +A+ D ++ IGF +GF+ SHF +++RFGMTP Sbjct: 263 AEGTTVGRYILNRRLTFAHEALTSGQQDALPVSEIGFRYGFASPSHFGRTYRERFGMTPL 322 Query: 295 EYRRKFR 301 + RR+ + Sbjct: 323 QARRESQ 329 >UniRef50_B8IWN2 Transcriptional regulator, AraC family n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IWN2_METNO Length = 330 Score = 190 bits (483), Expect = 5e-47, Method: Composition-based stats. Identities = 63/277 (22%), Positives = 112/277 (40%), Gaps = 6/277 (2%) Query: 27 LLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQD 86 E + G L + L+ + + G L+RT ++ + LSG +EQD Sbjct: 42 PAGEAFAGTLRIRSFERGTLADIASGGQVLTRTADRIRRAKSDAVLFNIILSGHCRLEQD 101 Query: 87 ERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLP 146 RQ AG + L +++RP + + I +++ R LE+ + + + + Sbjct: 102 GRQAVPTAGSLFLYESARPYHIETSPDFRTIVVMIDRGRLERSLGNLRFYTGRAMCSVDT 161 Query: 147 MVQLSHRLLQESMNN-----PALSETESEAALQAMVCLLRPVLHQRESVQPRRERQFQKV 201 + +++ Q + A + T EA + ++ LR + R E + Sbjct: 162 VARIAGSFWQTLSSQLDGVPDAAANTLIEAGIDVVIPALRSMAGDRAEGSEACELTVMRA 221 Query: 202 VTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAA 261 I E L + IA G+S R L F +KGL + +R RL D + Sbjct: 222 TAFIASAFHRESLTVDDIAAAAGVSTRRLQECFKEKGLTPMEQLRKHRLKHAHDRLNDGH 281 Query: 262 -DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 + + I GFSD +HFS F++ +G++P R Sbjct: 282 CQNLSVLSIMSQSGFSDPAHFSRAFRKEYGISPSAAR 318 >UniRef50_B5GUE4 AraC family regulatory protein n=1 Tax=Streptomyces clavuligerus ATCC 27064 RepID=B5GUE4_STRCL Length = 327 Score = 189 bits (481), Expect = 8e-47, Method: Composition-based stats. Identities = 71/307 (23%), Positives = 123/307 (40%), Gaps = 14/307 (4%) Query: 5 VDNEFQQWLSQINQ-VCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEV 63 ++ F+ W I+Q V + + ++L+T++ + RT + Sbjct: 13 PEHRFEWWRDLISQDVAPTRITTDHAKDFPATAGMAQLGAVQLTTMSFPAIRSERTPALI 72 Query: 64 KGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSK-----QIS 118 + SD + L + + Q + ++ AGD+ L S P S I Sbjct: 73 RYSDPEDYQLTLILGTEMWISQARNEARMAAGDLVLWSTSLPFDGRGLAGSHNGISKAII 132 Query: 119 LLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAAL----- 173 L LPRT L + A + + + R L + E + A + Sbjct: 133 LHLPRTGLPLPTAKVDHLLANAVPGRTGIAGILARHLLGVAEEASHLEGPAAAQVGIATW 192 Query: 174 QAMVCLLRPVLHQRESVQP--RRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLY 231 + L R+ V P R + ++ ID N+ + L P IA +SVR+L+ Sbjct: 193 ELATAFLGHWADARDRVPPESRDRMRLARIDAFIDANLSDPHLTPAGIAAYHHLSVRTLH 252 Query: 232 RMFADKGLVVAQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFG 290 +F D+ V+ IR RRL C + A + + I WGF++ + FS +F+ +G Sbjct: 253 WLFRDREQTVSATIRRRRLRRCCAELTAARYAAQPIHTIAARWGFTNAAAFSRIFRTEYG 312 Query: 291 MTPGEYR 297 +TPGE+R Sbjct: 313 ITPGEFR 319 >UniRef50_B5GMZ9 AraC-family transcriptional regulator n=1 Tax=Streptomyces clavuligerus ATCC 27064 RepID=B5GMZ9_STRCL Length = 341 Score = 189 bits (481), Expect = 8e-47, Method: Composition-based stats. Identities = 56/313 (17%), Positives = 115/313 (36%), Gaps = 13/313 (4%) Query: 1 MNPAVDNEFQQWLSQINQVCGNFTG-RLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRT 59 M+ + F W + + + + + T V + R+ Sbjct: 23 MDIPASDRFAYWCDLMGSTHAPLDLLSDHADDFRARQQVFGLGDVVVWPATFPSVIMRRS 82 Query: 60 WQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQ---ESSKQ 116 + ++ SD ++ L+G ++ + + + G G + S+P + + Sbjct: 83 TKLIRQSDPESYHLSLLLNGHGVVTRQDWEADYGPGHFHSQNTSQPVDIQGSSELGRIQI 142 Query: 117 ISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNP-----ALSETESEA 171 I L +P+ LL + + L + L++ N A Sbjct: 143 IGLEVPKELLPLPKRLADRAIGLPMSERHGVGALLGQFLRQVARNAGDYRLADGPRLGGV 202 Query: 172 ALQAMVCLLRPVLHQRESVQPRRER--QFQKVVTLIDDNIREEILRPEWIAGETGMSVRS 229 A + + L Q ++ P R ++ I+ N+ + L P +A +S Sbjct: 203 AADLVATMFAHALDQENALPPHTHRYTTVLRIKAFIERNLGDPELTPTAVAAAHNISTGH 262 Query: 230 LYRMFADKGLVVAQYIRNRRLDFCADAIRHA-ADDEKLAGIGFHWGFSDQSHFSTVFKQR 288 L+R+F ++G+ VA IR RL+ + E++ + WG + + FS F+ Sbjct: 263 LHRIFREEGITVAALIRRSRLERARAELVDPLRAGERVHTVAARWGLT-AAEFSRSFRAT 321 Query: 289 FGMTPGEYRRKFR 301 +GM+P +YR+ R Sbjct: 322 YGMSPSDYRQLHR 334 >UniRef50_A9D8L4 Transcriptional regulator, AraC family protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D8L4_9RHIZ Length = 311 Score = 189 bits (481), Expect = 9e-47, Method: Composition-based stats. Identities = 64/294 (21%), Positives = 117/294 (39%), Gaps = 9/294 (3%) Query: 9 FQQWLSQINQVCGNFTGRLLTER-YTGVLDTHFAKG-LKLSTVTTSGVNLSRTWQEVKGS 66 F W ++Q + + R + G + +S++ + RT Q+++ Sbjct: 25 FGYWQETVSQAYTALSPEPVDSRPFHGQIKLFELADDASISSIKAGAQIVRRTRQDIQLR 84 Query: 67 DDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLL 126 + FQL GQ+ + Q + +I AG + LLDA+ P ++ + +Q L LP++ L Sbjct: 85 ACEAVFINFQLQGQSTISQRGIEAKIDAGSLVLLDATEPFAMKFDRQFEQACLHLPKSAL 144 Query: 127 EQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPVLHQ 186 E + + + L ++ +L L Sbjct: 145 EVNGIRASEFVGRAVTRQSGFAAPLFSAIDSLTAG-----VPAPHVLPGLMQMLSFGLSN 199 Query: 187 RESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIR 246 ++ V + N+ L P A +S R L+++FA G+ ++ Sbjct: 200 ARRNA-VADQHLVTVQNFVVHNMGNSDLSPGLTARHFRISTRHLHKLFARDGITFGTFLL 258 Query: 247 NRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKF 300 + RL C I A+ DE ++ + F GF QSHFS F+Q+FG +P + R+ Sbjct: 259 DARLQACRKRIL-ASPDEPVSLVAFAHGFRSQSHFSRAFRQKFGCSPNQLRKSH 311 >UniRef50_Q28K70 Transcriptional regulator, AraC family n=1 Tax=Jannaschia sp. CCS1 RepID=Q28K70_JANSC Length = 332 Score = 188 bits (479), Expect = 1e-46, Method: Composition-based stats. Identities = 59/290 (20%), Positives = 127/290 (43%), Gaps = 10/290 (3%) Query: 12 WLSQINQVCGNFTG-RLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAW 70 W +++ + + G + L +S VT++G + R + ++ Sbjct: 37 WADGLDEAFVQLEPVATTGDGFYGHIQQTSTAELDVSVVTSTGHEIRRLDRHIRHRSADL 96 Query: 71 FYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYF 130 Y G++ + Q + V D++++D P S+ + + +S+ +P +E+ Sbjct: 97 LYVNILGRGRSEVSQRD-TVVAAPMDVSIVDPRAPYSIRQEAPFQLVSIAVPPDWVEREA 155 Query: 131 PHQKPICAERLDADLP--MVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPVLHQRE 188 H + +L + L+ LL + L+ + ++ ++ L P + + Sbjct: 156 RHCHFLSRTAAGRELSSVVWGLAKMLLAIKPDQDGLATSLAQQIHHSLALL--PEMAGSD 213 Query: 189 SVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNR 248 + Q + + + + LR E +A + G+SVR ++++F G V+++I + Sbjct: 214 ATPRVSVAMLQ---SYVQRHFSQPDLRAEHLARQFGISVRRVHQLFEPTGHTVSEFINDL 270 Query: 249 RLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 RL AD + AA ++ I + G+SD S+F+ FK+R+G +P YR Sbjct: 271 RLARAADCLGDAALARRTISEIAWQVGYSDPSYFTRRFKRRYGCSPRAYR 320 >UniRef50_A8L0T7 Transcriptional regulator, AraC family n=3 Tax=Actinomycetales RepID=A8L0T7_FRASN Length = 298 Score = 188 bits (479), Expect = 1e-46, Method: Composition-based stats. Identities = 63/280 (22%), Positives = 108/280 (38%), Gaps = 11/280 (3%) Query: 29 TERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDER 88 + + G +D G + +T S ++ R+ ++ D +Y +EQ Sbjct: 10 ADCFRGRIDVSGLSGTTVVALTFSPLSGRRSPALIRHHDPEDYYLFMVHGSPIRLEQSGN 69 Query: 89 QVQIGAGDITLLDASRPCSLYWQESSKQ---ISLLLPRTLLEQYFPHQKPICAERLDADL 145 + AGD+ L D S P + + + +Q + LPR L + L Sbjct: 70 VTCLTAGDMALFDTSHPLAADFLDHGRQKRVTLMRLPRASLPLPGGTTDCLLGNTLLTRT 129 Query: 146 PMVQLSHRLLQESMNNPALSETESEAAL-----QAMVCLLRPVLHQRES--VQPRRERQF 198 P L + L N A + L V L + + + V+ R Sbjct: 130 PTGALLGQFLSGFRENAAACGSAELHRLGRIGFDLAVTFLASHIDAQHTLPVETREHVLR 189 Query: 199 QKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCA-DAI 257 ++ I+ N+ + LRP IA +SVR+L+++F + V+ IR RRL+ C D + Sbjct: 190 ARIDAFIEHNLGDRGLRPATIAAHHHISVRTLHQLFQGQPETVSAMIRRRRLERCKVDLL 249 Query: 258 RHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 + I WGF + FS F+ +G P + R Sbjct: 250 NPQLRHHTIGDISARWGFRHPADFSRAFRAAYGAPPRDLR 289 >UniRef50_D0J2C8 Transcriptional regulator, AraC family n=2 Tax=Comamonas testosteroni RepID=D0J2C8_COMTE Length = 326 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 50/292 (17%), Positives = 120/292 (41%), Gaps = 5/292 (1%) Query: 11 QWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAW 70 W ++ + G + + ++ L T + ++ + S + RT + + Sbjct: 25 AWQHWMSTLYGLESDVYGDQHFSARLGTLELGPVGMTRIEASRHRVRRTSASMARHSTDF 84 Query: 71 FYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYF 130 V G+A + Q+ R+ +G + D ++ + E + + + LP++ E + Sbjct: 85 LKIVAPWHGEARVCQNGREAVARSGQWLIYDTTQEYEVLNPEWCEHLIITLPKSRFEDHG 144 Query: 131 PHQKPICAERLDADLPMVQLSHRLLQESMNN-PALSETESEAALQAMVCLLRPVLH---Q 186 + + + +++ +++ + A+ + ++ +++ L++ L Sbjct: 145 RAIDALMGRYVGGSEGVSRIALDMMRGTFAECRAMGQGLAQHVTDSLLQLIQLSLLDACG 204 Query: 187 RESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIR 246 R + E ++ + ++R+ L + +A S R LY FAD+ L ++Q+I Sbjct: 205 RAASLSASELLLGRIKAYVRQHLRDPALSVDAVAAALNCSKRHLYNAFADESLSISQHIW 264 Query: 247 NRRLDF-CADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 R+ + + A L + GF+ +H S +FKQ G TP ++R Sbjct: 265 AERVALFQRELLSPANRHCTLTELALASGFASGAHLSRLFKQHTGQTPAQFR 316 >UniRef50_A1K9Y0 Putative AraC-like transcriptional regulator n=1 Tax=Azoarcus sp. BH72 RepID=A1K9Y0_AZOSB Length = 311 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 66/298 (22%), Positives = 119/298 (39%), Gaps = 5/298 (1%) Query: 6 DNEFQQWLSQINQVCGNFTGRL-LTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVK 64 + W + + T R+ G + + + ++R + Sbjct: 13 ETRHDNWRETVASQFLPLDFEVARTTRFHGRGLWAQVDQARAAEIRMCEHRVTRQRSHLA 72 Query: 65 GSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRT 124 +D ++ LSG ++Q+ + + A DA P SL E ++ ISLL Sbjct: 73 AADGPAVKLLWLLSGSGRLQQNGGECSLQAERWLFYDAIHPYSLQLSEDARFISLLYTGN 132 Query: 125 LLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPVL 184 E++ + + + P L L A L++++ L L Sbjct: 133 SAERWMRLARDLGSAPRQTAGPARIALLALRGAMRERDGLDGLAQRALLESVLALTESAL 192 Query: 185 HQRESVQPRRER---QFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVV 241 Q R+R + + + ++ L P+ IA +S RSLY +FA+ GL Sbjct: 193 RTALPEQGGRQRDALRLVEARRFVLQHLANAELGPDDIARALHVSRRSLYNLFAEAGLRP 252 Query: 242 AQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRK 299 +++RN RL+ +A+ A D + I GF+D +HFS F++RFG++P YR + Sbjct: 253 REFVRNLRLEKACEALARPAGD-SITTIALDHGFTDAAHFSRSFRERFGVSPSAYRGR 309 >UniRef50_UPI0001B557E7 AraC family transcription regulator n=1 Tax=Streptomyces sp. C RepID=UPI0001B557E7 Length = 347 Score = 187 bits (476), Expect = 3e-46, Method: Composition-based stats. Identities = 68/305 (22%), Positives = 116/305 (38%), Gaps = 13/305 (4%) Query: 4 AVDNEFQQWLSQINQV--CGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQ 61 A + F + ++ + R + + + ++LS VT S V+ RT Sbjct: 12 ARQDRFDWFCETVSSHVMPVRLSSRHAAD-FRADITELDLGVVRLSAVTCSPVSSRRTPT 70 Query: 62 EVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYW-QESSKQISLL 120 V+ D G + Q + + G + L D SRP E+ + + Sbjct: 71 HVRQGDPEHLQLALLTRGAVRISQRGSESVVS-GGLVLTDTSRPSEAAAADETLTSVVVQ 129 Query: 121 LPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLL 180 +PR L + A L A + ++ + E L A+ L Sbjct: 130 IPRQALALGSDRLDGLLARNLPAGSGSGAILAGFMRSLLTQAPHCRPEELRGLGAVTLDL 189 Query: 181 RPVLHQRESVQP-------RRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRM 233 R+ P R Q++ +++N+ + L P+ IA MS+R L+ + Sbjct: 190 ATAFLARQLGDPGAAPARARARETLQRIHRFVENNLGDPDLTPQVIADRHNMSLRHLHAL 249 Query: 234 FADKGLVVAQYIRNRRLDFCADAI-RHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMT 292 F D+ L VA IR RL+ + R + I WGF+ + FS F+Q +G+T Sbjct: 250 FGDQPLTVAALIRRSRLERARSDLARAELGGHPVQAIAARWGFASATGFSRAFRQAYGLT 309 Query: 293 PGEYR 297 P E+R Sbjct: 310 PTEHR 314 >UniRef50_B1M073 Transcriptional regulator, AraC family n=3 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1M073_METRJ Length = 328 Score = 187 bits (475), Expect = 4e-46, Method: Composition-based stats. Identities = 72/304 (23%), Positives = 132/304 (43%), Gaps = 10/304 (3%) Query: 5 VDNEFQQWLSQINQVCGNFTGRLLTE-RYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEV 63 N F+QW + + + + E ++ G + + +S + + T Sbjct: 12 PRNAFRQWREMVCEQLVPVELKTVDEAQFKGSIAATNIGAVPISHFAHTAMRSETTADAA 71 Query: 64 KGSD-DAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLP 122 + D Y V LSG+AI Q +++ + GD+ +LDA RP ++ E+S + L LP Sbjct: 72 RRDDRSDRAYAVLMLSGRAIARQGDQEAECQMGDLFVLDA-RP-AVVQTETSSTLILDLP 129 Query: 123 RTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMN-----NPALSETESEAALQAMV 177 R LE + A R+ AD L+ +Q+ + P + + + +V Sbjct: 130 RDRLETALGPSRLFSALRVGADHASTTLARTYIQDLVAVADRLGPDAAARLASIGIDLIV 189 Query: 178 CLLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADK 237 L + Q Q+ ++ ++ + L P +A G+S+R L +F ++ Sbjct: 190 ASLAERMAQEVPRSIHGNVTVQRAKAYVETHLGDPSLDPPQLAAAMGLSLRRLQELFHER 249 Query: 238 GLVVAQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEY 296 G ++ YI RRL+ A + A + + + GFS Q+HF+ FK R+ ++P EY Sbjct: 250 GRHISDYIWERRLEVAAKRLTDPACAHLSVGMLAYACGFSSQAHFARRFKDRYDVSPREY 309 Query: 297 RRKF 300 R+ Sbjct: 310 RQAH 313 >UniRef50_A5EQH2 Transcriptional regulator, AraC family n=3 Tax=Bradyrhizobium RepID=A5EQH2_BRASB Length = 777 Score = 187 bits (475), Expect = 4e-46, Method: Composition-based stats. Identities = 59/301 (19%), Positives = 122/301 (40%), Gaps = 12/301 (3%) Query: 7 NEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGS 66 W ++ V + A GL LS ++ ++ V + Sbjct: 15 ERPDAWRDVLSAVGLQPATKTAFYDGHATASHRTAPGLALSRLSAGSQSV----AAVPQA 70 Query: 67 DDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLL 126 + + + A++ + + +G + LL +R S+ +Q + I L + L Sbjct: 71 HEDLPIALLAIEDGAVLRSGDSHRIVPSGHLLLLPRTRDWSIAFQRDLRAIVLSVTSDAL 130 Query: 127 EQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPA-LSETESEAALQAMVCLLRPVLH 185 + ++ A + + + R ++ + LS+ E Q++V LL + H Sbjct: 131 HGRISGKLKFAKPQVIAPIGLADVVCRTIEATARTLETLSDAEWSTVAQSLVDLLLTLAH 190 Query: 186 QRE------SVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGL 239 ++ + ++ I+ + + L P +A G+S R L ++F G Sbjct: 191 RQAVPVSEAGSSATQAATLHRICQSIERRLDDATLTPASVAQAEGISERYLQKLFESAGD 250 Query: 240 VVAQYIRNRRLDFCADAIRHAAD-DEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRR 298 + Y+R RRL + + A+ ++ I + WGF+D +HFS F+ RFG++P E+R+ Sbjct: 251 NFSHYVRERRLQRAWTDLSNPAEAHHSISEIAYRWGFADSAHFSRSFRARFGLSPREFRQ 310 Query: 299 K 299 + Sbjct: 311 Q 311 >UniRef50_D2B571 AraC-type DNA-binding domain-containing protein-like protein n=2 Tax=Actinomycetales RepID=D2B571_STRRD Length = 353 Score = 187 bits (475), Expect = 5e-46, Method: Composition-based stats. Identities = 65/310 (20%), Positives = 118/310 (38%), Gaps = 12/310 (3%) Query: 4 AVDNEFQQWLSQINQVCGNFT-GRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 + F++W +NQ E + + + V RT + Sbjct: 13 PPADRFERWRELVNQAHAPMDMTSDHREDFRASQRLLDLGSVSVWRTAFQSVCCRRTPKL 72 Query: 63 VKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQ---ISL 119 ++ SD + +G + + + ++ + + D SRP L+ +SS ++L Sbjct: 73 IRQSDPEGVHLSLPTNGPLVTVRGDHEIVYDPYSLCVYDTSRPTELHAGDSSNLHAGVAL 132 Query: 120 LLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMN-----NPALSETESEAALQ 174 +P+ LL + + RL L L M P+ A+ Sbjct: 133 EIPKALLHLPGNMLEKLTTRRLSVREGFGALLAHFLTHLMKGTGSYQPSDGFRLGTVAVD 192 Query: 175 AMVCLLRPVLHQRESVQP--RRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYR 232 + L L + + P RR+ ++ I+ N+ + L P IA +SVR L Sbjct: 193 LVSALFAHTLDADDILPPETRRQTLILRIHAFIELNLVDRALTPADIAAHHHISVRYLQL 252 Query: 233 MFADKGLVVAQYIRNRRLDFCADAIRHAAD-DEKLAGIGFHWGFSDQSHFSTVFKQRFGM 291 +F +G V +IR RRL+ C + + + + + GF+ + FS F+ +GM Sbjct: 253 LFQQQGKTVTGWIRRRRLERCREDLADPSQLARSIRAVALRRGFATSADFSRAFRAAYGM 312 Query: 292 TPGEYRRKFR 301 +P EYR R Sbjct: 313 SPSEYRHAAR 322 >UniRef50_Q82PX9 Putative AraC-family transcriptional regulator n=1 Tax=Streptomyces avermitilis RepID=Q82PX9_STRAW Length = 331 Score = 187 bits (474), Expect = 5e-46, Method: Composition-based stats. Identities = 65/311 (20%), Positives = 113/311 (36%), Gaps = 15/311 (4%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEV 63 DN F W I + + + + + + + R+ + V Sbjct: 15 PADNRFDYWWELIGRTRSSEIISAHAADFWAEYRLMELGPVAVWSASFLPSRYRRSPRMV 74 Query: 64 KGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLL--- 120 + SD ++ L G ++ R G D+ L D+SRP L + + Sbjct: 75 RQSDPETYHLTLLLDGGLALDHAGRTDTFGPRDLHLADSSRPYDLRSTGDREHHVVKGVA 134 Query: 121 --LPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLL-----QESMNNPALSETESEAAL 173 P+ LL + + L + L L Q P+ + L Sbjct: 135 VDFPKALLPLPPHLVRGLLGRGLSGREGLGALLTDFLVGLDRQADTLQPSDAPRLGTVVL 194 Query: 174 QAMVCLLRPVLHQRESV--QPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLY 231 + L VL ++ + RR + + I N+ + L P IA +S+ L+ Sbjct: 195 DLLSAWLAQVLDAETALSQETRRVATAESIRAFIRQNLHDPELSPPVIAAAHHISLSYLH 254 Query: 232 RMFAD--KGLVVAQYIRNRRLD-FCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQR 288 R+F +G VA YIR++RL+ C D + + + WGF S F+ F+ Sbjct: 255 RIFQQQAQGETVAAYIRSQRLEGACRDLASTSLRTTPIYAVAARWGFLHASDFTRTFRTA 314 Query: 289 FGMTPGEYRRK 299 +G +P EYR + Sbjct: 315 YGRSPKEYRLQ 325 >UniRef50_A5EI80 Transcriptional regulator, AraC family n=2 Tax=Bradyrhizobium RepID=A5EI80_BRASB Length = 335 Score = 185 bits (471), Expect = 1e-45, Method: Composition-based stats. Identities = 71/312 (22%), Positives = 124/312 (39%), Gaps = 16/312 (5%) Query: 5 VDNEFQQWLSQINQVCGNFTGRLLTE-RYTGVLDTHFAK------GLKLSTVTTSGVNLS 57 +F + I Q N T + + + ++ VT + Sbjct: 19 PAEQFSYYREAICQAFMNLTPEPARGIGFAAEVQSIGIGRDGKNTTGAINRVTFPEHVVR 78 Query: 58 RTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQ- 116 R+ ++ S FY +L+G+ + QD+ +V + AG + + D+ R +L Sbjct: 79 RSRADIAASAQRCFYLNLKLAGRCTIVQDDCEVSLSAGQVGIFDSDRTFALQHDRGPSLG 138 Query: 117 -ISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNP-ALSETESEAALQ 174 IS +P L P+ I RL D + L + N L+ ++ A Sbjct: 139 VISFRVPAEALFSRLPNAPDIAPMRLSDDPCVGALIVETARSLNANALRLAADDTAALFD 198 Query: 175 AMVCLL-----RPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRS 229 ++ L R + + + + I + +RE L +A G+S R Sbjct: 199 VLLDLAALGVSRSFRREAHATTSFADATTLALRRAIHERLREPGLTVATVARMVGISERY 258 Query: 230 LYRMFADKGLVVAQYIRNRRLDFCADAIRHAADDEK-LAGIGFHWGFSDQSHFSTVFKQR 288 ++++ A G ++ + RRLD A +R + + I F WGFSD SHF+ FKQR Sbjct: 259 VHKLLARAGTSFSELVMERRLDGAARDLRDPCCAARDIGSIAFDWGFSDLSHFTRRFKQR 318 Query: 289 FGMTPGEYRRKF 300 FGM P ++R + Sbjct: 319 FGMRPRDWRAQL 330 >UniRef50_C0RK84 Helix-turn-helix-domain containing protein AraC type n=35 Tax=Brucella RepID=C0RK84_BRUMB Length = 332 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 62/270 (22%), Positives = 119/270 (44%), Gaps = 11/270 (4%) Query: 33 TGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQI 92 +G + + + + T T + + +RT + + ++ G + + D V Sbjct: 33 SGSAKLYASGLITIGTTTFNTQSYARTPKIIAQGGLDFYVLQLLTGGHLLGDFDGTDVAA 92 Query: 93 GAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSH 152 GDI ++D ++ + + ++ +PR LE+ + + L P+ +L Sbjct: 93 KPGDIVIIDMAKTLVSRAFKGPRT-TVFIPRAELEEVVGG-RNLHGLVLSGTRPITRLLF 150 Query: 153 RLLQES-MNNPALSETESEAALQAMVCLLRPVLHQRE----SVQPRRERQFQKVVTLIDD 207 +QE P LS E+ AA + M+ LR + E P +++++ ID Sbjct: 151 SYIQELNAVVPDLSMDEAIAAQKVMLTFLRTGITGLEENLVGFLPVNLPMKKRILSFIDQ 210 Query: 208 NIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAADDEKL- 266 N+ + +L P I +S LYR F + G VA+ IR++RLD + + + Sbjct: 211 NLSDPLLGPRTIIQNFHVSRSHLYRAFENDGG-VAKTIRDKRLDRAFRILAE-ERNRTVY 268 Query: 267 -AGIGFHWGFSDQSHFSTVFKQRFGMTPGE 295 + + GF+D + F++ FK RFGM+P + Sbjct: 269 SKEVAYRCGFNDPAQFASAFKNRFGMSPRD 298 >UniRef50_Q2IYF7 Transcriptional regulator, AraC family n=1 Tax=Rhodopseudomonas palustris HaA2 RepID=Q2IYF7_RHOP2 Length = 326 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 64/300 (21%), Positives = 118/300 (39%), Gaps = 12/300 (4%) Query: 6 DNEFQQWLSQINQVCGNFTGRLL-TERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVK 64 W + +V + +R G L L LS + R + K Sbjct: 15 SESIAAWRQAMAEVYYRLDIQARHDDRVVGELIDVQLGSLGLSNFKADAQRVIRRKESAK 74 Query: 65 GSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRT 124 F +F + EQ R G + LL+++ + + S+ I++ + R Sbjct: 75 IDGSEDFVFLFPIRKGLQYEQRGRSGLAMPGTVFLLNSAENYVIDVPDGSENITIKVDRR 134 Query: 125 LLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPVL 184 LL +CA A+ +V + L + +N P ++ Q+++ L+ +L Sbjct: 135 LLIDRVKGIDGLCASMNIANSQLVPVVTTLGAQLLNLPPGE--HADRLQQSVIDLICLML 192 Query: 185 HQRESVQPR-------RERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADK 237 RES Q + + ++ + N+ + L P+ A E +SVR L+++F Sbjct: 193 DLRESAQDKTFIRQTLASSLYHRIDAYLQRNLHDCDLSPDHAAREHKISVRYLHKVFHFH 252 Query: 238 GLVVAQYIRNRRLDFCADAIRHAADDEKL--AGIGFHWGFSDQSHFSTVFKQRFGMTPGE 295 G Q + RL I + + + GF+ QS+FST +++RFG+TP + Sbjct: 253 GTSFGQRLLELRLQRAHYVISRHGATTTINLGQVAYECGFTSQSYFSTCYRKRFGLTPRQ 312 >UniRef50_D0IZV7 Transcriptional regulator, AraC family n=1 Tax=Comamonas testosteroni CNB-2 RepID=D0IZV7_COMTE Length = 338 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 65/298 (21%), Positives = 115/298 (38%), Gaps = 5/298 (1%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLL-TERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 + W + T +L + + + L L+ V ++ RT + Sbjct: 11 PARLRREFWRDICARAFVPMTPQLRRADDFRAAMVHRTIDCLALNEVRGPAHDMWRTAAD 70 Query: 63 VKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLP 122 + + +G A + Q+ ++V++G + L D+ RP L ++ +SL +P Sbjct: 71 LSCGGSPVLFVNLYRTGNARIVQNGQEVEVGPQRLLLFDSCRPFKLQHSVATDLLSLAVP 130 Query: 123 RTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRP 182 LL RL P + L +++ S + + Q+MV LLR Sbjct: 131 HALLGDRIVQALEEMPWRLPGTAPALLLMNQMQALSKWQADIQAPDGACIAQSMVSLLRA 190 Query: 183 VLH---QRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGL 239 ++ + + P R KV LI + + P A E G+SVRSL+ A G Sbjct: 191 LMPEGLEPRAAPPHRRHARAKVAALIGRHYADPDYSPLRAAAEIGVSVRSLHAWLAGDGT 250 Query: 240 VVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 + RL+ ++ A + GF+ +H S F++RFGM P +R Sbjct: 251 SFGAELWGYRLERVRTLLK-AEPQLSIQEAASRCGFASCAHLSRRFRERFGMAPKAWR 307 >UniRef50_B7WVN7 Transcriptional regulator, AraC family n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WVN7_COMTE Length = 326 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 68/303 (22%), Positives = 109/303 (35%), Gaps = 9/303 (2%) Query: 4 AVDNEFQQWLS-QINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 QW + + + G E L ++ + + + RT Q Sbjct: 18 PASQRLDQWEAYNASFLVGLRCSSYADEGLNARQSNMRLGQLAMANIDGNAHVIERTPQL 77 Query: 63 VKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLP 122 V+ + LS A Q+ + + GD+ + D + Q + P Sbjct: 78 VRQHPKESVFVSLVLSSGAFFYQEHSCIHLAPGDLVIYDTRHAYLFGFTHQMHQFLVDTP 137 Query: 123 RTLL---EQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVC- 178 PIC A L+H + N A E + LQ C Sbjct: 138 ADWFYRNCSRAQLPGPICVS--GAAGSGRVLNHAFQKLVGNAMARPEGVDQDRLQFEACD 195 Query: 179 LLRPVLHQRESVQPR-RERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADK 237 LLR +L + R ID+++ L +A +G+S+R L RM + Sbjct: 196 LLRTMLAGEAAGSSALRASHLLAARAHIDEHLHRHSLDASEVAAASGVSLRHLNRMLQAE 255 Query: 238 GLVVAQYIRNRRLDFCADAIRHAADDE-KLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEY 296 G V + I RRL+ A +R AA +A I + GF+ Q+HF+ F+ GMTP + Sbjct: 256 GHSVTELILIRRLERAAIELRQAALGRYSIAEIAYRCGFASQAHFARRFRSHHGMTPTQM 315 Query: 297 RRK 299 R + Sbjct: 316 REQ 318 >UniRef50_A5EN17 Transcriptional regulator, AraC family n=2 Tax=Bradyrhizobium RepID=A5EN17_BRASB Length = 391 Score = 185 bits (469), Expect = 2e-45, Method: Composition-based stats. Identities = 60/303 (19%), Positives = 115/303 (37%), Gaps = 12/303 (3%) Query: 5 VDNEFQQWLSQINQVCG--NFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 + W + G + + + ++ + L + SG RT + Sbjct: 57 PEANIAAWREATSTFFDVDELAGGEVA-PFHADVLSYALGPVLLGSARASGQRFRRTAET 115 Query: 63 VKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLP 122 + S ++G +Q+ AGD+ +LD ++ + I+L++P Sbjct: 116 IARSGVDHIILQLYVTGGYHGVAGPHPIQVEAGDLCVLDLAQTLETRAT-PFEAITLVVP 174 Query: 123 RTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMN-NPALSETESEAALQAMVCLLR 181 R + + P + + L D + L R L P +S E +AA+ + L+ Sbjct: 175 RPMFDARLPQVEDLHGLVLPHDGALAPLLARHLSALFEFAPRMSVDECQAAIDGTIALIA 234 Query: 182 PVLHQRESVQPRR-----ERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFAD 236 L + + ++ I+ + L + +A G+S SLYR+FA Sbjct: 235 ACLRGELERRAADRSVTADASLLRIRQYIEAQLASPELSADTVASHFGLSRASLYRLFAP 294 Query: 237 KGLVVAQYIRNRRLDFCADAIRHAADDE-KLAGIGFHWGFSDQSHFSTVFKQRFGMTPGE 295 G +A YIR+RRL + +++ + W +HF+ +FK +G+TP Sbjct: 295 LGG-IADYIRSRRLHRAFFDLAATGSRTVRISEVARRWQLGTDAHFTRLFKTAYGITPRA 353 Query: 296 YRR 298 R Sbjct: 354 ARE 356 >UniRef50_C3JNQ1 Putative transcriptional regulator n=1 Tax=Rhodococcus erythropolis SK121 RepID=C3JNQ1_RHOER Length = 324 Score = 185 bits (469), Expect = 2e-45, Method: Composition-based stats. Identities = 62/302 (20%), Positives = 106/302 (35%), Gaps = 8/302 (2%) Query: 6 DNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKG 65 D W + + + G + LST + R + Sbjct: 23 DGVIDYWREARRHAYVDVSTDPADPDFYGDVRLGRYTNFTLSTKRATAEQTHRNRSRIAQ 82 Query: 66 SD--DAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLP- 122 D + + FQ G ++EQ + G + + D+S P + +Q+ + +P Sbjct: 83 GREQDEYLFATFQTRGSCVIEQAGHTAVVPPGSMVIYDSSLPFAFRADAPYEQVIVKVPA 142 Query: 123 -RTLLEQYFPHQKPICAERLDADLPMVQLSH---RLLQESMNNPALSETESEAALQAMVC 178 R I A + M ++ +L Q ++P + A Sbjct: 143 DRAFALAGIDRTTDILATTMSCAGAMSAVAAFFTQLAQHQDSDPHGAAQLETHASSLATS 202 Query: 179 LLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKG 238 LL V R + + + +V+ I ++ + L E IA +S RSLYR+F Sbjct: 203 LLSLVTPVRSAAEIPAFLRRDQVLAYIHAHLADPDLDAERIATAMRLSRRSLYRLFQGTD 262 Query: 239 LVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRR 298 V Y+R R+ +R ++ I GFSD F F+ GMTP E+R Sbjct: 263 HTVMGYLRAARIQSAQHLLR-KYPSRPVSLIARQTGFSDPRTFYRAFRDTTGMTPNEHRE 321 Query: 299 KF 300 + Sbjct: 322 RL 323 >UniRef50_A3XDY1 Transcriptional regulator, AraC family protein n=1 Tax=Roseobacter sp. MED193 RepID=A3XDY1_9RHOB Length = 324 Score = 184 bits (468), Expect = 2e-45, Method: Composition-based stats. Identities = 60/297 (20%), Positives = 117/297 (39%), Gaps = 9/297 (3%) Query: 6 DNEFQQWLSQINQVCGNFT-GRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVK 64 + ++W + ++ ++ + +S ++ RT + + Sbjct: 20 ASRLEEWRASMSDAYYALDIVEDDRHALDAKIEIVTLSNVCISKFRSTTAKGFRTRKSIA 79 Query: 65 GSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRT 124 F VF G+ Q R + AG +L + P L S I+L LP + Sbjct: 80 HDTTEHFVFVFVTEGEMFFNQLARWGTLSAGQYVMLRSGEPYELSCLSPSNAITLHLPVS 139 Query: 125 LLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNP-----ALSETESEAALQAMVCL 179 +E + CA+ +++D + ++ ++Q + P A+S + ++ L Sbjct: 140 DVEDRYKLAHLHCAKAIESDAVLFPMAASVMQSVGSVPVSARKAMSHDLRRQVIDTILLL 199 Query: 180 LRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGL 239 LR + ++ + +++ I+ N L A + GMSV ++R F L Sbjct: 200 LRA--ERIQANVDGNDGHLGRLIDYIEQNYANTDLSARTAAQDMGMSVSHVHRAFGSFNL 257 Query: 240 VVAQYIRNRRLDFCADAIRHA-ADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGE 295 +R+ RL + +R + + + I F GF D SHFS F+ FG++P E Sbjct: 258 TFGSTLRDTRLAQSYELLRSSEGQNSNIGEIAFKVGFLDHSHFSKSFRTAFGISPTE 314 >UniRef50_C8STG1 Transcriptional regulator, AraC family n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8STG1_9RHIZ Length = 315 Score = 184 bits (467), Expect = 3e-45, Method: Composition-based stats. Identities = 62/272 (22%), Positives = 109/272 (40%), Gaps = 6/272 (2%) Query: 36 LDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAG 95 L + +LS + + + + D + QL G++ EQ + V +G Sbjct: 40 LVSVNLGACRLSEIKANSHLVVNDRLFWRSFDPDAIKILVQLRGRSRFEQQQVAVDLGPQ 99 Query: 96 DITLLDASRPCSLYWQESSKQISLLLPRTLLEQ----YFPHQKPICAERLDADLPMVQLS 151 + D R SL Q+ L +PR+ P+ + L Sbjct: 100 SAVIYDPVRSYSLQNLSDVDQLILQVPRSTFGDDTLARLSAPLPLPGNGDSLTHIVSGLM 159 Query: 152 HRLLQESMNNP-ALSETESEAALQAMVCLLRPVLHQRESVQPRRERQFQKVVTLIDDNIR 210 + E+ A S ++ +Q + L++ E +P E +++V ID N+ Sbjct: 160 QMAIGEAHKLDEAGSRRVGDSLVQLVNGLIQAKPMAPEFRRPPLEALRERIVAYIDANLA 219 Query: 211 EEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCA-DAIRHAADDEKLAGI 269 L E IA G S R L+R F +G + +++ +RRL+ + + A ++ I Sbjct: 220 RSSLSAEDIARHMGCSRRYLHRAFEGEGATLERFVWDRRLERSKEELLSPARASASISEI 279 Query: 270 GFHWGFSDQSHFSTVFKQRFGMTPGEYRRKFR 301 F GF+ +HFS FK R+ + P E R + R Sbjct: 280 AFACGFNSSAHFSRAFKGRYDVAPRELRERLR 311 >UniRef50_C3VA09 Putative transcriptional regulator n=1 Tax=Pseudomonas nitroreducens RepID=C3VA09_9PSED Length = 325 Score = 184 bits (467), Expect = 3e-45, Method: Composition-based stats. Identities = 75/302 (24%), Positives = 132/302 (43%), Gaps = 10/302 (3%) Query: 5 VDNEFQQWLSQINQVCGNFT-GRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEV 63 D ++W ++ L+ E + + + L+ + + Sbjct: 19 PDAAVRRWEEVLSDGIIPMEVSSLVGEGFEAAWRRYGVGPVDLNFLQAKPQRVHHALSSA 78 Query: 64 KGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQES-SKQISLLLP 122 S D + +F SG + RQV+ G I LLD +RP L + + ++ LP Sbjct: 79 SQSADDSYELLFVRSGSLEFKHQRRQVKATTGSIVLLDNARPYDLEMNDPVTDCFAVHLP 138 Query: 123 RTLLEQYFPHQKPICAERLDA----DLPMVQLSHRLLQESMNNPALSETESEAALQAMVC 178 L ++ P+ K I A + A P+V L + + + L +++ Sbjct: 139 DVWLRKWIPYPKDIIASPITAVNGWGAPLVALLETISTLGLEQSPMPRGVVADQLGSLIA 198 Query: 179 LLRPVLHQRESVQPR-RERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADK 237 +L + Q+E Q R R+ +K+ + D EE L PE +A + G+S R L+ +FA Sbjct: 199 ML--IASQQEVRQDRHRDELLRKLKQTLADRSHEEGLTPEVVAQQNGISKRYLHLLFAQV 256 Query: 238 GLVVAQYIRNRRLDFCADAIRHAADDE-KLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEY 296 G ++ + + RLD + +R D +++ I + GF DQSHF+ FK+RF +P EY Sbjct: 257 GTTFSKVLLDIRLDKASALLRDCRYDRYQMSDIAWDCGFVDQSHFARTFKRRFLRSPLEY 316 Query: 297 RR 298 R+ Sbjct: 317 RK 318 >UniRef50_C7Q9A2 Transcriptional regulator, AraC family n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7Q9A2_CATAD Length = 335 Score = 184 bits (467), Expect = 3e-45, Method: Composition-based stats. Identities = 77/305 (25%), Positives = 134/305 (43%), Gaps = 9/305 (2%) Query: 1 MNPAVDNEFQQWLSQINQVCGNFTGRL-LTERYTGVLDTHFAKGLKLSTVTTSGVNLSRT 59 M+ +F +W I + T L + + G + L ++ +T+ ++ RT Sbjct: 8 MDVPKTAQFARWRELICEAFLALTPESDLRDGFAGTVAQRQLAELSIARITSQRQHVRRT 67 Query: 60 WQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISL 119 +++ S +Y Q+ G ++M QD R + GD+ ++D +RP + +Q+ +Q+SL Sbjct: 68 TRDIDRSAYQGYYVNLQIRGSSLMTQDGRSTVLHPGDLAVVDTTRPFAFDFQDDFQQLSL 127 Query: 120 LLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCL 179 P+ LL A P + H LL S+ + LSE + + Sbjct: 128 YAPKALLLPGSGTPVTTATRVATAAGPGAAVRHALL--SLTSGDLSEDTAARLAAHACGI 185 Query: 180 LRPVLHQRESVQP-----RRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMF 234 L L Q+ P R++R + ID+++ + L +A G+SVR LY +F Sbjct: 186 LSIALDQQTEPDPRSTPLRQDRLHAAALADIDEHLTDADLSAAAVAARLGVSVRLLYSVF 245 Query: 235 ADKGLVVAQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTP 293 A + A +R RRLD +R A + I GF+D + F F++ +G TP Sbjct: 246 AGRRHSFASEVRRRRLDHTWRDLRDPARTHLCVIDIAVAAGFADVTSFHRAFRREYGRTP 305 Query: 294 GEYRR 298 + RR Sbjct: 306 AQVRR 310 >UniRef50_C5CTZ5 Transcriptional regulator, AraC family n=1 Tax=Variovorax paradoxus S110 RepID=C5CTZ5_VARPS Length = 324 Score = 184 bits (467), Expect = 4e-45, Method: Composition-based stats. Identities = 68/309 (22%), Positives = 115/309 (37%), Gaps = 16/309 (5%) Query: 4 AVDNEFQQWLSQINQVCGNF----TGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRT 59 W I VC F L + L++ + ++ V S ++ R Sbjct: 18 PPAQRLDYW---IGAVCEGFLEMDVTSSLAGSFGATLESAPLGAIGVNRVRGSAQDVYRR 74 Query: 60 WQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISL 119 + + S ++Y + + + QD R ++ GD+ L+D+ R L +S+ +SL Sbjct: 75 RRAIAQSRSNYYYLLCKTDSPWVAVQDGRSARMLPGDLVLVDSRRCYELRLLQSADTLSL 134 Query: 120 LLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCL 179 LP +E + P A R+D ++ Q+ AL A L + Sbjct: 135 ELPTAWVESWLPDAGGQVARRIDGQSGWGRVLSGFAQQLSPQGALKPPLPAALLTDHLGG 194 Query: 180 LRP--------VLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLY 231 L + R ++V+ + E L +A G+S RSL+ Sbjct: 195 LLALAAGTACDAGGSAAPSESARAALRRRVLDATRERHAEPGLTAAGVARGLGISERSLH 254 Query: 232 RMFADKGLVVAQYIRNRRLDFCADAIRHAADDE-KLAGIGFHWGFSDQSHFSTVFKQRFG 290 R + A + R+ + A D +A IG G +D SHF F + G Sbjct: 255 RCLCEGSTTFAAALTGFRMQVARRMLGDARFDRLSIAEIGLRVGLADASHFVRQFSRHLG 314 Query: 291 MTPGEYRRK 299 MTPG +RR+ Sbjct: 315 MTPGAWRRQ 323 >UniRef50_C9PGF5 Transcriptional regulator AraC family n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PGF5_VIBFU Length = 258 Score = 183 bits (465), Expect = 7e-45, Method: Composition-based stats. Identities = 54/257 (21%), Positives = 112/257 (43%), Gaps = 9/257 (3%) Query: 46 LSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRP 105 +S + ++ + +V+ SDD ++ L A + Q + AGDI + D +P Sbjct: 2 ISRIRSTPIEYG-EMDDVEYSDD--YFICLSLCPLACLTQAGVTSEQHAGDIVMYDNHQP 58 Query: 106 CSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALS 165 + + QI + +P L+ ++ + L D P+V +L+++ Sbjct: 59 FRYTFPQGDNQIVISVPHALVREHIKDCEAWLNVTLKRDAPLVSFVAAMLEQAWLTEEQE 118 Query: 166 ETESEAALQAMVCLLRPVLHQRESVQPRRERQFQK-----VVTLIDDNIREEILRPEWIA 220 E + L+A++ +L ++ ++ I+ + + L I+ Sbjct: 119 EVFGDQMLRAILMMLGTAFQAASGEASALVQRDKRNNLALAQHYIEQQLGDPALSVVSIS 178 Query: 221 GETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSH 280 MS R+L R+FA + V +++ +RL C + + ++ I + GFS+ H Sbjct: 179 SHLHMSARTLSRLFAKQNTSVMRWVWLQRLKACRRMLL-THQEMAISDIAYQQGFSNLPH 237 Query: 281 FSTVFKQRFGMTPGEYR 297 F+ +FK+++GMTP + R Sbjct: 238 FNKLFKEKYGMTPSQMR 254 >UniRef50_A3VDL3 Helix-turn-helix, AraC type n=1 Tax=Rhodobacterales bacterium HTCC2654 RepID=A3VDL3_9RHOB Length = 322 Score = 183 bits (464), Expect = 8e-45, Method: Composition-based stats. Identities = 69/305 (22%), Positives = 129/305 (42%), Gaps = 12/305 (3%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLLTER-YTGVLD-THFAKGLKLSTVTTSGVNLSRTWQ 61 A F++ ++ + + F R R Y G + ++ + ++L+ ++ + + +R Sbjct: 11 ASGASFERQMNGLLRT--RFDLRSDGARSYDGEIRKSYVSPHVRLADISFTPHS-TRLKA 67 Query: 62 EVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLL 121 F Q+ G A + Q R+ I I +D ++P + + + S+ L Sbjct: 68 GKSSRLGRSFLVSHQIEGHACVRQGGREAVIRPNQIFFIDTTQPFEIE-TDDIRTRSIYL 126 Query: 122 PRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLR 181 ++ FP ++ A LD D M ++ E + + L + L Sbjct: 127 DSHFWQEIFPERELYTATALDCDRGMGYTCKTMIDEMFGMEWDIQDRAMQRLAGCLANLL 186 Query: 182 PVLHQRESVQPR-----RERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFAD 236 V + R E+ Q++ I N+ + L IA E G+SVR ++ +F+ Sbjct: 187 AVSMVTSNPLERTGLGSNEQTLQRIHEAILRNLADPDLDCARIAEEVGLSVRQVHAVFSG 246 Query: 237 KGLVVAQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGE 295 G + ++I RRL A + +A + ++ I F WGF++ +HFS FK FGM P + Sbjct: 247 TGSTLMRHIWKRRLSRIASDLANANLSHKPVSTIAFEWGFNEAAHFSRQFKAEFGMPPAK 306 Query: 296 YRRKF 300 YR Sbjct: 307 YREHH 311 >UniRef50_UPI0001B551BF AraC family transcriptional regulator n=1 Tax=Streptomyces sp. C RepID=UPI0001B551BF Length = 302 Score = 182 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 52/240 (21%), Positives = 97/240 (40%), Gaps = 10/240 (4%) Query: 67 DDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLL 126 D Y + G + + + + D+ D +R L + E + I +PR L Sbjct: 42 DRTHVYLGVHVRGPVTVVHERAKSLLEPNDLVFCDPARRHLLQFGEDCQMIFFRVPRCYL 101 Query: 127 EQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSET-----ESEAALQAMVCLLR 181 + + + L+ L + + A+ + L+ Sbjct: 102 GVTESELNQVLGVPVRGGKGIGALASDFLTALAAKAEFRRSTIGDRRARTAVHLLSVLVM 161 Query: 182 PVL-----HQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFAD 236 +L + + ++ I++++ + L PE IA +SVR L ++F + Sbjct: 162 ELLEADTTDEADDASGAVNEMLSRIRAYIEEHLMDPDLSPESIARAHHISVRYLQKLFQN 221 Query: 237 KGLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEY 296 G V+Q++R RRLDFC + ++ +A + WGFS SHFS F+ +GM+P E+ Sbjct: 222 DGSTVSQWVRERRLDFCRLELGRSSRRITMAAVAHRWGFSSPSHFSRTFRGAYGMSPSEW 281 >UniRef50_B5GLL9 AraC family regulatory protein n=2 Tax=Streptomyces clavuligerus ATCC 27064 RepID=B5GLL9_STRCL Length = 337 Score = 182 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 59/309 (19%), Positives = 109/309 (35%), Gaps = 11/309 (3%) Query: 2 NPAVDNEFQQWLSQINQ-VCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTW 60 N A + + I++ V + + + +S + + RT Sbjct: 5 NVAAADRADWYHDVISRTVAPHELTVTDPSAFRARSGGMSLGRIGVSRHFHTEHSSRRTP 64 Query: 61 QEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSK--QIS 118 + ++ D F G + Q +G GD L D S P ++ + Sbjct: 65 RLIRQGDPEHFVLGVITHGAKKISQHRTDTVLGTGDGVLFDTSHPYAVGTPGTGSSGMTF 124 Query: 119 LLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVC 178 L +PRTLL + P + +R + + + + A + L Sbjct: 125 LHIPRTLLSFHAPRLDTVLPQRFPTGHGLAAILRHFIDSLHTHTAECTPQERRILDRTAL 184 Query: 179 LLRPVLHQRES-------VQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLY 231 L ++ + +V IDD++ + L P +A +S+R+L Sbjct: 185 DLVTGFVAEQTDTWAGAPADTPQRVLLHRVDAFIDDHLGDPRLDPRAVADHHHISLRTLQ 244 Query: 232 RMFADKGLVVAQYIRNRRLDFCADAIRHAAD-DEKLAGIGFHWGFSDQSHFSTVFKQRFG 290 +F + +A I+ RRLD C + + I WGF + FS F+ +G Sbjct: 245 ALFRTREEGIAASIKRRRLDRCRADLSAPGQAGVPIGVIAARWGFGRPAGFSRAFRDTYG 304 Query: 291 MTPGEYRRK 299 ++P EYR + Sbjct: 305 ISPQEYRNQ 313 >UniRef50_B4EG24 AraC family regulatory protein n=12 Tax=Burkholderia RepID=B4EG24_BURCJ Length = 326 Score = 182 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 60/297 (20%), Positives = 111/297 (37%), Gaps = 7/297 (2%) Query: 4 AVDNEFQQWLS-QINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 + W + + G L GL ++ ++ + R+ Sbjct: 18 PARDRMAYWDAFNAATLVGLRCSSLSPAGLEVEKTDIALPGLGIADISGQDHVIERSPAL 77 Query: 63 VKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLP 122 V+ + LSG+A Q +R + AGD+ + D P + +Q+ + +P Sbjct: 78 VRQLPKESLFACQILSGRAYFIQRDRCLLAEAGDVVVYDTRVPYLFGFLTPMRQLLIDIP 137 Query: 123 RTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAA-----LQAMV 177 T L+ + R+ + L+ S+ + E +AA + ++ Sbjct: 138 ITTLDDRLDAELAALPLRIAPKPGAGAMLGATLRASVERFMKAPVERDAARFAEHTRTLI 197 Query: 178 CLLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADK 237 L I ++ E L P+ +A G+S+R L R+FA + Sbjct: 198 AALVDAEVNGVGASRASLSYLLTAKQYIATHLGEPELGPQAVADAVGLSLRHLGRLFAAE 257 Query: 238 GLVVAQYIRNRRLDFCADAIRHAADDE-KLAGIGFHWGFSDQSHFSTVFKQRFGMTP 293 G + Q+I + RL + A + + I F WGFS Q+HFS ++R+G +P Sbjct: 258 GESITQHIWSERLSHAHRELTDARLRKTSIGEIAFRWGFSSQAHFSRAIRERYGASP 314 >UniRef50_C4WP68 Helix-turn-helix domain-containing protein n=2 Tax=Ochrobactrum intermedium LMG 3301 RepID=C4WP68_9RHIZ Length = 376 Score = 181 bits (459), Expect = 3e-44, Method: Composition-based stats. Identities = 80/308 (25%), Positives = 127/308 (41%), Gaps = 14/308 (4%) Query: 5 VDNEFQQWLSQINQVCGNFT-GRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEV 63 V+ W V E G + + + + TV+ +G R + + Sbjct: 49 VEARNDFWREATRPVFDTMPLSPDSKEPLEGAISSRPLGSIAIGTVSFNGQRYIRDHRTI 108 Query: 64 KGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPR 123 SD ++ SG+ + + V+ GDI LD S+ S+ ISL + R Sbjct: 109 VHSDLDYYLIQLFTSGKMNGDFNGLGVRADVGDICFLDLSKAFKSEVDAGSR-ISLAVSR 167 Query: 124 TLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMN-NPALSETESEAALQAMVCLLRP 182 LE+ + + L D PM +L L+ + +LS E+ A+ +A++ LL Sbjct: 168 RDLEKVIG-PRSLHGVVLRGDQPMTRLIATYLKGIRSLERSLSPVEALASEEALIALLAG 226 Query: 183 -----VLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADK 237 L E Q+V+ ID NI E+ L PE I + +S LYR FA+ Sbjct: 227 AVKGDALESLEDYPSMSIALRQRVLAFIDQNIGEQELSPELIQQKLRVSRSHLYRAFAED 286 Query: 238 GLVVAQYIRNRRLDFCADAI-RHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEY 296 G VA+ IR+RRLD + + + + I + GFS + F+ RF MTP E Sbjct: 287 GG-VAKIIRDRRLDEAFKQLTKPSKQSRSVRQIAYSLGFSSGNQLLRGFRARFDMTPKEA 345 Query: 297 ---RRKFR 301 R + + Sbjct: 346 QIERERLQ 353 >UniRef50_B1ZAE8 Transcriptional regulator, AraC family n=1 Tax=Methylobacterium populi BJ001 RepID=B1ZAE8_METPB Length = 335 Score = 180 bits (458), Expect = 4e-44, Method: Composition-based stats. Identities = 69/277 (24%), Positives = 118/277 (42%), Gaps = 9/277 (3%) Query: 24 TGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIM 83 +GRLL+ +D + L + V L RT + V F SG + + Sbjct: 36 SGRLLSGPI--AMDNYHLGDLLVGEVRAPAQILERTPRMVAQQGLDHLLLQFYHSGTSRV 93 Query: 84 EQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLD- 142 E + + A L D ++P ++ E +LLLPR L+ + P+ + + D Sbjct: 94 EVAWGETDVTANACILFDLAQPVTV-VAEPVHATNLLLPRALVAEKVPNVEALHGHAFDY 152 Query: 143 ADLPMVQLSHRLLQESMNN-PALSETESEAALQAMVCLLRPVLHQRESVQPRRERQFQ-K 200 A + +L ++E ++ L + QA+ L L + + +P + Q Sbjct: 153 ASDRISRLFFTCVRELVDCVDVLEIHQLPHVSQAVAMLGSACLRGQAADRPSSDTQLSIT 212 Query: 201 VVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRH- 259 + I+ + L E +A G+S +LYR F +G V ++IR RRL + Sbjct: 213 IRQYIEKELASPRLDAETLAEHFGLSRATLYRQFVAEGG-VQRFIRERRLLRAMKMLTQP 271 Query: 260 -AADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGE 295 A +++ + + GFSD+ FS FK+RFG P E Sbjct: 272 GPAGRPRVSAVAYATGFSDEKTFSRAFKRRFGFLPRE 308 >UniRef50_B6YYX2 Transcriptional regulator, AraC family n=1 Tax=Pseudovibrio sp. JE062 RepID=B6YYX2_9RHOB Length = 322 Score = 180 bits (458), Expect = 4e-44, Method: Composition-based stats. Identities = 70/300 (23%), Positives = 138/300 (46%), Gaps = 7/300 (2%) Query: 8 EFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSD 67 E +W +++ ++CG+F T TG + + VT + ++R ++ Sbjct: 14 ELDEWNTRLTEICGHFVTNTETGSVTGNASLLHLGDVDCARVTHNAREITRGPSDISKDG 73 Query: 68 DAWFYTVFQLSGQAIMEQDERQVQI-GAGDITLLDASRPCSLYWQE--SSKQISLLLPRT 124 +A+++ + QL G+A +EQ+ + + GD+TL+D+ + S QIS+ +PR Sbjct: 74 EAYYFLILQLRGEAELEQNGQTALLSSPGDMTLIDSVKSSVFRANRELGSDQISIHIPRH 133 Query: 125 LLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPVL 184 LL + F + C ++ A QL + L ++ S+ + + + L Sbjct: 134 LLHKQF-NSTYACGRKISAVSGAGQLINAHLNILLSAQPGSQKQHLLSGAFHDVVSATFL 192 Query: 185 HQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQY 244 + S + Q +++LI DN EE + ++ + MS S+YR+F + GL + Sbjct: 193 DEDTSTLQEGYDKLQLLLSLIHDNALEENFNIDELSKLSSMSRSSIYRLFREHGLSCNEQ 252 Query: 245 IRNRRLDFCADAIR---HAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKFR 301 I R+ + H+ D +++ + F +GF D S F+ F+ + GM+P + + R Sbjct: 253 IAKVRVGRFKRELSRRLHSRQDFRISQLAFEFGFRDLSTFNRAFRAQVGMSPRNFAEQIR 312 >UniRef50_C9Z7X5 Putative regulatory protein n=1 Tax=Streptomyces scabiei 87.22 RepID=C9Z7X5_STRSW Length = 322 Score = 180 bits (457), Expect = 5e-44, Method: Composition-based stats. Identities = 65/304 (21%), Positives = 113/304 (37%), Gaps = 9/304 (2%) Query: 3 PAVDNEFQQWLSQINQVCGNFT-GRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQ 61 P W ++ +V + + + L +S G + R+ Sbjct: 16 PPASVR-DAWSEKMAEVHLPWALSYSRRDHLDATVRYRQLDALIVSEFRGGGYSGHRSPD 74 Query: 62 EVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLL 121 + LSG+ + Q + + +G + L D+ E +++SL+L Sbjct: 75 TDSRLGGPRVGVMINLSGRLVCRQGDDTLVLGPDQLLLWDSETAEGFDAVEPRRELSLML 134 Query: 122 PRTLLEQYFPHQK--PICAERLDADLPMVQLSHRLLQESMN-----NPALSETESEAALQ 174 PR A + A + ++ L+ A ++ Sbjct: 135 PREQAPPALAAAATSGRGAVSVAAGSGLASIAADQLRAITRELDHLGDAGLAIACQSLFD 194 Query: 175 AMVCLLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMF 234 + L + RE +V I+D++ + L +A +SVR+L+ F Sbjct: 195 TLDTALDSARAPAGTRSALREALLVRVRRYIEDHLDDADLCATSVAEAHDVSVRTLHLAF 254 Query: 235 ADKGLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPG 294 AD G V ++IR RRL C + A + + F WGF+D +HFS VFKQ +G+TP Sbjct: 255 ADTGTTVGRWIRARRLRACYRDLTRAGGTATVTDVAFRWGFNDVAHFSRVFKQAYGVTPS 314 Query: 295 EYRR 298 RR Sbjct: 315 SVRR 318 >UniRef50_A1TIH4 Transcriptional regulator, AraC family n=2 Tax=Acidovorax RepID=A1TIH4_ACIAC Length = 312 Score = 180 bits (456), Expect = 6e-44, Method: Composition-based stats. Identities = 59/302 (19%), Positives = 119/302 (39%), Gaps = 11/302 (3%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRL-LTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 W+ + + ++ L + GL+++ V+ SG + RT Q Sbjct: 14 PPAQRADYWVGAVCDCFLDMEVEPGQRHAFSATLTSVPCGGLRVNRVSGSGQRVRRTQQA 73 Query: 63 VKGSD-DAWFYTVFQLSGQAIMEQDE-RQVQIGAGDITLLDASRPCSLYWQESSKQISLL 120 ++ D D ++Y + + S + QD ++ GD+ L+D+ R L + + +S+ Sbjct: 74 IRRGDGDNFYYLLCKDSAPCHVAQDGAGAARLLPGDLALVDSRRRYLLDFPDVVDTVSIQ 133 Query: 121 LPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPA--LSETESEAALQAMVC 178 +P L+ + P R+D ++ + + L+ ++E + Sbjct: 134 IPIGWLDTWLPAADRWLGRRVDGATGWGRVLSAYVGQLCAERPERLAALQAEHLGGLLSL 193 Query: 179 LLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKG 238 PV P R ++ + + E L +A + G+S+R+L+R+ + G Sbjct: 194 ACGPV-----PEAPPRTGLLPRIEQCVRERFCEPGLTAAHVADDVGVSLRTLHRVLSSGG 248 Query: 239 LVVAQYIRNRRLDFCADAI-RHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 A + R+ + + +A IG GF D SHF+ +Q G TP + R Sbjct: 249 TTFAVLLMRERMAVAQRMLHAPSHRHVTVAEIGRRAGFLDPSHFARACRQWCGRTPAQER 308 Query: 298 RK 299 + Sbjct: 309 AR 310 >UniRef50_Q38ZV0 Transcriptional regulator, AraC family n=3 Tax=Burkholderia cepacia complex RepID=Q38ZV0_BURS3 Length = 368 Score = 180 bits (456), Expect = 6e-44, Method: Composition-based stats. Identities = 56/293 (19%), Positives = 108/293 (36%), Gaps = 7/293 (2%) Query: 12 WLSQINQVCGNFTGRL-LTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAW 70 W QI + + +D +++ ++ S + S K + Sbjct: 62 WSEQIRHRFFPLELNAGTSGEFDANVDVFDHARCRVARISASAHSASIGRDACKTLKHRY 121 Query: 71 FYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYF 130 ++QLSG A +EQ +V + G TL +AS P + + +++L + Sbjct: 122 VKVIWQLSGVARLEQGACEVIVPPGHFTLYEASSPYWIQSDAHGEFVTMLCEVADHDALL 181 Query: 131 PHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPVLHQRESV 190 + + L ++ L+ + LL + + Sbjct: 182 ALARHAIGRAMPTTGGAAVALASLQAMIAEGRRMNPRSRFGVLELVATLLAETIDFTDGT 241 Query: 191 QPR-----RERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYI 245 P RE + I ++ + L P+ IA + R+LY+ F G I Sbjct: 242 APASRRKIRETLLRDAQQYIHRHLDDGELSPDRIAAALKVCRRTLYQAFESIGERPQAMI 301 Query: 246 RNRRLDFCADAIRHAADD-EKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 + RL+ C + + D + + GFSD ++F+ +F++RFG+TP + R Sbjct: 302 QRLRLEKCHEVLSQTGADGASITRLALQSGFSDPAYFARLFRRRFGVTPSQCR 354 >UniRef50_B1LSW4 Transcriptional regulator, AraC family n=2 Tax=Alphaproteobacteria RepID=B1LSW4_METRJ Length = 319 Score = 180 bits (456), Expect = 6e-44, Method: Composition-based stats. Identities = 74/295 (25%), Positives = 126/295 (42%), Gaps = 6/295 (2%) Query: 8 EFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSD 67 F+ W G+ R ER++ + + G L+ +S V L + V + Sbjct: 22 AFEFWRCTALARFGDIGRRHPRERFSAKRLSVASAGWSLTHTVSSPVELEFRSRHVDRNA 81 Query: 68 DAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLE 127 A L G EQ R Q+ GDI+ L +RP Q + ++I L +PR + E Sbjct: 82 RAMVVIGLGLDGVGYHEQHGRGAQLNPGDISFLTRNRPFVAGTQSAYEEIRLAVPREMFE 141 Query: 128 QYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPVLHQR 187 + L ++ RL + + +S E++AA++ ++ LL ++ Sbjct: 142 AWIGAADAFAGRSLGPQPAGAEVRARLRGVAGSIAWMSADEAQAAVEGVLHLLGHLVDGA 201 Query: 188 ----ESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQ 243 + + I + + L P+ I G+S SLYR FA+ G +A Sbjct: 202 ARRGDPEAVSQAAVVSLARAHIARRMHDPDLNPQDIQRALGLSRTSLYRAFAETGG-IAA 260 Query: 244 YIRNRRLDFCADAIRHAADDE-KLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 IR+ RLD + DD+ ++A I + GF+D F+ F++RFG+ PG+ R Sbjct: 261 AIRDARLDLARRRLEARRDDKVRIASIAYACGFTDVPTFNRGFRKRFGLAPGDLR 315 >UniRef50_C3JMU3 Transcriptional regulator, AraC family n=2 Tax=Rhodococcus erythropolis RepID=C3JMU3_RHOER Length = 307 Score = 180 bits (456), Expect = 6e-44, Method: Composition-based stats. Identities = 65/301 (21%), Positives = 126/301 (41%), Gaps = 7/301 (2%) Query: 5 VDNEFQQWLSQINQVCGNFTGRLLT-ERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEV 63 D ++ + + L ER + ++ L ++G+ L+RT + V Sbjct: 4 PDQRADAFVDAMGRASVPCAIHLENPERVSARMNVWNLGAASLFRSESTGMRLTRTPRHV 63 Query: 64 KGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPR 123 + + Q SG ++Q + Q ++ AG++ + D + W + L +P Sbjct: 64 RSASMPVLAIALQESGIGHLDQHDEQRRVPAGELLMTDLTSTYDFSWPGTGASQCLYVPM 123 Query: 124 TLLEQYFPHQKPICAERLDADLPMVQLSH-RLL---QESMNNPALSETESEAALQAMVCL 179 L + ++L V ++H R L + +E EA+++ L Sbjct: 124 DRLGLPIDTVRDAATRPHHSNLYPVMIAHVRELFRSAALLETDPAAEQLGEASIELARAL 183 Query: 180 LRPVLHQ-RESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKG 238 + + H ++ PR + I +++ + L P IA +S+R LY++ +D G Sbjct: 184 VTSIAHANPDASAPRSALAMTSIRRYIREHLHDPTLNPARIAHAHNISLRQLYKICSDNG 243 Query: 239 LVVAQYIRNRRLDFCADAI-RHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 + Q+I +RL D + R A D +A + GF D HFS F+Q +G++P +R Sbjct: 244 FRIEQWIITQRLQKARDELARPATVDLPIATVAHRAGFVDAGHFSRRFRQAYGLSPTRWR 303 Query: 298 R 298 + Sbjct: 304 Q 304 >UniRef50_A9C153 Transcriptional regulator, AraC family n=1 Tax=Delftia acidovorans SPH-1 RepID=A9C153_DELAS Length = 382 Score = 180 bits (456), Expect = 7e-44, Method: Composition-based stats. Identities = 62/305 (20%), Positives = 116/305 (38%), Gaps = 15/305 (4%) Query: 5 VDNEFQQWLSQINQVCGNFTGRLLT---ERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQ 61 + F+ W + I+ + T + + + L L + SR Sbjct: 48 SADRFEAWRASISVLFDVAPVEHRTASGDSFHASVHATHLGQLLLGDLRFGAQRFSRNKA 107 Query: 62 EVKGSDDAWFYTVFQLSGQAIMEQDER-QVQIGAGDITLLDASRPCSLYWQESSKQISLL 120 + + SG + + D ++Q+ AGD+ + D +R E S +SL+ Sbjct: 108 RAARDGLDHYLVQWYRSGSFVGQHDGSSELQVNAGDVVVFDMAR-TQQTLAEHSHVLSLI 166 Query: 121 LPRTLLEQYFP-HQKPICAERLDADLPMVQLSHRLLQESMNN-PALSETESEAALQAMVC 178 +PR L + F H + L + L L P ++ +++ + A Sbjct: 167 VPRRLGDAAFGTHGADLHGTVLASGSIFAGLLADHLDALHRRLPTIALLQADDVVHATTQ 226 Query: 179 LLRPVLHQ-----RESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRM 233 +L L E+ + +++ I N+ L PE + G+S LY + Sbjct: 227 MLAACLRPSQRTLAEARNEVQAATLERIQRHIAQNLAAP-LTPEILCRRFGISRHRLYHL 285 Query: 234 FADKGLVVAQYIRNRRLDFCADAIRHAADDE-KLAGIGFHWGFSDQSHFSTVFKQRFGMT 292 F G V +Y++ RRL + + ++A + GF+ ++HFS F+ FG T Sbjct: 286 FEPLGG-VMRYVQQRRLQRAFHTLSNPTCRRLRIADVATRLGFASEAHFSRAFRAAFGHT 344 Query: 293 PGEYR 297 P + R Sbjct: 345 PSDVR 349 >UniRef50_Q0B5M9 Transcriptional regulator, AraC family n=4 Tax=Burkholderia ambifaria RepID=Q0B5M9_BURCM Length = 316 Score = 180 bits (456), Expect = 7e-44, Method: Composition-based stats. Identities = 59/295 (20%), Positives = 108/295 (36%), Gaps = 6/295 (2%) Query: 13 LSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFY 72 I ++ + GL+++ V T+ + + R +D + Sbjct: 17 RDLIADSFLPLVFHDTGPQFRMSVRVATVGGLRMAEVDTTAIRVDRDRSLASRADSDCYK 76 Query: 73 TVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLP---RTLLEQY 129 +FQ++GQ+ + Q + G+ + DA++P + +S+ ++ L P T+ + Sbjct: 77 ILFQIAGQSRVTQRNATSTVNPGEWVIYDATQPYMIESTNASRFVAALTPPRSGTMWRWF 136 Query: 130 FPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLL--RPVLHQR 187 + +Q H L+ + N S E + ++ + R Sbjct: 137 VERAGVQVRRTVGNAQLALQSIHYLMDGQVPNDPESLFGFEQSTLMLLDSVIRREASDSL 196 Query: 188 ESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRN 247 R + + + L P+ +A +S R+LY A I+ Sbjct: 197 TGTDARSAALRMNAEIYLSHHYSDPDLSPDKLASALNVSRRTLYSALAASERTPQSLIQE 256 Query: 248 RRLDFCADAIRHAAD-DEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKFR 301 RL A+ AD + L + GFSD +HF FK RFG +PG YR R Sbjct: 257 YRLQASRRALEDPADTNRTLLELAIACGFSDITHFGRAFKARFGCSPGVYRDACR 311 >UniRef50_B6A2N3 Transcriptional regulator, AraC family n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2304 RepID=B6A2N3_RHILW Length = 314 Score = 179 bits (455), Expect = 8e-44, Method: Composition-based stats. Identities = 60/269 (22%), Positives = 108/269 (40%), Gaps = 5/269 (1%) Query: 35 VLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGA 94 + + +L+ + + + D + Q G A + Q + + Sbjct: 42 SMLSAMLGACRLTRLEADRHVVFGERVTAEPDDPDAIKLILQTEGSASITQGGLHAPVSS 101 Query: 95 GDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRL 154 + + D RP L +Q+ L LPR L Q + + M + L Sbjct: 102 NALVIYDPRRPYVLTNSTPVRQLLLQLPRQALPQAAVERLAVPFTAHAEHDGMCGILLSL 161 Query: 155 LQESMNNPA-LSETESEAALQAMVCLLRPVLHQRES---VQPRRERQFQKVVTLIDDNIR 210 ++ +M+ + L E + Q M+ L+R ++ + V + ++ I NI Sbjct: 162 METTMHEISHLDEARRSSVGQTMIDLVRTMIGDGATAGLVANPLDLLLARIKDFIAGNIA 221 Query: 211 EEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAADDE-KLAGI 269 L IA G SVR +YR F + L + YI + RL A +R A +++ I Sbjct: 222 RPDLTVAMIARRMGCSVRYVYRAFEAERLTPSDYIWDLRLQQAAAKLRAAGGHSGEISEI 281 Query: 270 GFHWGFSDQSHFSTVFKQRFGMTPGEYRR 298 F GFS +HFS F+ R+ ++P ++R+ Sbjct: 282 AFALGFSSSAHFSRAFRARYTVSPSQWRK 310 >UniRef50_D1TAE4 AraC family transcriptional regulator n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1TAE4_9BURK Length = 326 Score = 179 bits (455), Expect = 9e-44, Method: Composition-based stats. Identities = 63/304 (20%), Positives = 123/304 (40%), Gaps = 13/304 (4%) Query: 4 AVDNEFQQWLSQINQVCG-NFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 A + W +++ + R L + + G +DT+ A G+ + T V +R+ Sbjct: 16 APRGQLPMWRERVSHFLDVPISRRQLADGFRGSIDTYRAGGMAFTDCRTDPVAQTRSVAR 75 Query: 63 VKGSDDAWFYTVFQLSGQAIMEQD---ERQVQIGAGDITLLDASRPCSLYWQESSKQISL 119 + + + G +R + LD ++P + + ++L Sbjct: 76 ISTDNVRQIVFHVAVEGTFETTTGLYPKRVALQTRPSVLALDMNQPMQMTL-GPCRLVAL 134 Query: 120 LLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN-PALSETESEAALQAMVC 178 LPR L++ P + I ++ P+ +L L + P + ++ AL Sbjct: 135 FLPRHLIDPVLPEAESIHGRMIEYQTPLARLIPAHLDDLCRRLPTMDARAAQEALHTCGL 194 Query: 179 LLRPVLHQRESVQP-----RRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRM 233 L+ + + R F ID N+ + L + + + +S +LYR+ Sbjct: 195 LMAAAFGKETGLTGGARAVARTAMFAAARRYIDANLGQPDLTVDSVLAMSQLSRPTLYRL 254 Query: 234 FADKGLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTP 293 F +G + YIRNRRL AD + H + + + WGF+ S F+ F++ + M+P Sbjct: 255 FEPEGG-LHAYIRNRRLREAADEL-HRHPRRPVIDVAYGWGFNSASDFNRAFRRAYDMSP 312 Query: 294 GEYR 297 G++R Sbjct: 313 GDFR 316 >UniRef50_Q8VUZ3 Cad gene transcriptional regulator n=2 Tax=Alphaproteobacteria RepID=Q8VUZ3_9BRAD Length = 336 Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats. Identities = 54/300 (18%), Positives = 115/300 (38%), Gaps = 5/300 (1%) Query: 5 VDNEFQQWLSQINQVCGNFTGRLLT-ERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEV 63 + W + T + G + L+L+ ++ + + R+ + Sbjct: 22 AQSALSSWTDHLASQLTELHIEGRTFSTHRGCIRHIELGPLQLNYLSATSQRVLRSRAMI 81 Query: 64 KGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPR 123 S + + + + +A + R++ I G LLD +P L + +++ L Sbjct: 82 DKSSNDYLLLLIEKE-EAQLHHYGRRLTIPEGSFVLLDNQQPFELLREAGGSSLAVRLED 140 Query: 124 TLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPV 183 L ++ PH + A L+ + + + + + Sbjct: 141 AWLRRWLPHPTAVVATLTGTRDGWGSTLATALRTIASEGLADAILPRSVIADQLGAFLAL 200 Query: 184 LHQRESVQPRR--ERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVV 241 ++ R + R ++ + + + + L P IA G+S R L+ +FA GL Sbjct: 201 IYGRPAQGIGRYQSEVLVRLKRHMQERLHDPELDPASIASSVGISKRHLHGLFAQTGLSF 260 Query: 242 AQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKF 300 + + RL+ A+ +R + + + GF++ SHFS F+ +FG+TP +YR +F Sbjct: 261 GAVLMDMRLERAAEMLRDRRFVGYRGCDVAWSCGFANASHFSRRFRVKFGVTPVDYRDEF 320 >UniRef50_Q92PG5 Transcription regulator AraC family n=1 Tax=Sinorhizobium meliloti RepID=Q92PG5_RHIME Length = 338 Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats. Identities = 67/298 (22%), Positives = 120/298 (40%), Gaps = 11/298 (3%) Query: 8 EFQQWLSQINQVCG-NFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGS 66 +F W IN V + +T ++ + ++ R+ V+ Sbjct: 15 DFDVWRESINVVFDVERRSQDGNRPFTASVEAFQLGDMVVTDAVLGAQRYVRSSARVRRD 74 Query: 67 DDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQE-SSKQISLLLPRTL 125 F +G I E + + AG +++LD S C L E +++ LPR+L Sbjct: 75 GMDHFVLNLYRTGGWIAETARGEFEGRAGQVSVLDLS--CELISDEPDCHLVAMFLPRSL 132 Query: 126 LEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETE----SEAALQAMVCLLR 181 +E P+ + M+ L+ L + P L + + AA Q + L Sbjct: 133 IEDRLPNLGGLHGSAPTGPYAML-LAEYLDMLARRLPFLHSGDETALAGAACQMLAACLA 191 Query: 182 PVLHQRESVQPRRER-QFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLV 240 P L E+ +P E ++ I+ ++ L + I G+S R+L+R+F +G Sbjct: 192 PSLANVEAARPGLELVLLRRAKRYIEGHLNSSALNIDAICNIVGVSRRTLFRLFEQEGG- 250 Query: 241 VAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRR 298 V YI+ RRL+ + + +++ I +GF HF+ FK ++G T E R Sbjct: 251 VLHYIQGRRLERIRAVLSDPNETRRISDIAAEFGFLRGDHFARAFKHQYGETAREIRE 308 >UniRef50_Q0FYH5 Transcriptional regulator, AraC family protein n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0FYH5_9RHIZ Length = 344 Score = 178 bits (452), Expect = 2e-43, Method: Composition-based stats. Identities = 63/285 (22%), Positives = 120/285 (42%), Gaps = 6/285 (2%) Query: 20 CGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSG 79 G R+ ++ + + + SGV+ R+ Q+++ F L G Sbjct: 36 AGGSDVRIADRAFSARFEARTVGPIVIFDRWLSGVSHERSTQKIRTDGFEHFVLQANLGG 95 Query: 80 QAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAE 139 + ++ + I G+I LLDA+RP + +++ +++ + R ++E + Sbjct: 96 ELVVTTPDATKIIRPGEIALLDAARPY-VNRCDAAHIVTMSVARHVIENAIGDGLDLHGR 154 Query: 140 RLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPVLHQRESVQPRRE---R 196 L + + L ++ N LS + A + A+ LL S + Sbjct: 155 ILGSATAAL-LLDFMVSVHRNANKLSLDAAPALIDALSSLLSIAASPNSSAASFSDVSPD 213 Query: 197 QFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADA 256 + ++ N+ + L PE IA G+S LY++F G V Y++ +R+ Sbjct: 214 KLVAAKRIVRANLGDRRLDPEKIAIMAGVSRSKLYQLFKPSGG-VDAYLQAQRVRRLKHL 272 Query: 257 IRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKFR 301 + + +A + + GF+ +SH S +FK FGM PGEYR+ R Sbjct: 273 LSRPRETRGIAELVYLCGFASESHASRMFKTMFGMPPGEYRKTQR 317 >UniRef50_C9YUR8 Putative transcriptional regulator n=1 Tax=Streptomyces scabiei 87.22 RepID=C9YUR8_STRSW Length = 299 Score = 178 bits (451), Expect = 2e-43, Method: Composition-based stats. Identities = 61/214 (28%), Positives = 98/214 (45%), Gaps = 6/214 (2%) Query: 90 VQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQ 149 V + GDI DA P S + L+ R L + + A + + Sbjct: 76 VHLRPGDICFYDAGHPPSPDLPAHCRLKVFLVSREELGLEDGDLRRVVAAPVARTSRLGT 135 Query: 150 LSHRLLQESMNN----PALSETESEAALQAMVCLLRPVLHQRESVQPR-RERQFQKVVTL 204 L L E + P ++E + A+ + L Q E+ P R +VV Sbjct: 136 LLSPFLSELADTVSADPPVAEMLARNAVNLLATLATERSGQDEAQTPGVRSPMVARVVRF 195 Query: 205 IDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAADD- 263 ID+++ + L PE IAG +SVR L+++F D+G V ++I+ RRL+ C + H + Sbjct: 196 IDEHLSDADLSPEVIAGAHHISVRYLHKLFRDEGTTVGRWIQRRRLEECRRDLVHGLRNR 255 Query: 264 EKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 +A + WGF +HFS VF+ +GM+P E+R Sbjct: 256 RTIASVAGRWGFLSATHFSRVFRAAYGMSPSEWR 289 >UniRef50_B1JB60 Transcriptional regulator, AraC family n=1 Tax=Pseudomonas putida W619 RepID=B1JB60_PSEPW Length = 389 Score = 178 bits (451), Expect = 2e-43, Method: Composition-based stats. Identities = 78/304 (25%), Positives = 125/304 (41%), Gaps = 16/304 (5%) Query: 1 MNPAVDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTW 60 M + FQ+W + F +L V H + + S Sbjct: 26 MEHSFQGCFQRWNLSSSAELTEFQRKLRANGLGVVSQVHIVVDPCVGRF---PLAYS--- 79 Query: 61 QEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLL 120 + D+ + LSG+ M Q Q+ AGD+ + + R E + +SL+ Sbjct: 80 ---QWGDELYIALQLHLSGRVRMRQWGEQIC--AGDMFVWRSDRRQDYEVLERACSVSLM 134 Query: 121 LPRTLLEQYFPHQK-PICAERLDADLPMVQLSHRLLQESMNN-PALSETESEAALQAMVC 178 +P LL +Y P +K P A R+D + L R L A+ + + ++ Sbjct: 135 IPWQLLREYLPGRKQPPSACRIDTRTGVGSLLSRHLVGLSEEIDAVPPSAHFTLCRTVIG 194 Query: 179 LLRPVLHQRESVQ--PRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFAD 236 LL L + + ++V++ I ++ E+ L P IA G+SVR L+ +FA Sbjct: 195 LLDIALPEPPCASKLTAKNALRERVLSYIAQHLHEDNLIPTRIAAAQGISVRYLHALFAQ 254 Query: 237 KGLVVAQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGE 295 V +I RL C + A +++ I F WGF+ SHF FKQ FGM+P E Sbjct: 255 SDTTVVGHILESRLYACRQTLADPACKHLQISEIAFRWGFNSTSHFCRTFKQFFGMSPSE 314 Query: 296 YRRK 299 RR+ Sbjct: 315 LRRR 318 >UniRef50_B1M2F8 Transcriptional regulator, AraC family n=2 Tax=Methylobacterium RepID=B1M2F8_METRJ Length = 351 Score = 178 bits (451), Expect = 3e-43, Method: Composition-based stats. Identities = 70/297 (23%), Positives = 126/297 (42%), Gaps = 10/297 (3%) Query: 10 QQWLSQINQVCGNFTGRLLTE-RYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDD 68 + W + + + + R T+ + ++ L + V L RT + + Sbjct: 40 RAWQDHLAPIF-DVSFRPETDLTVPIAMRSYHLGDLLVGDVVAPAHTLVRTREMIGQQGL 98 Query: 69 AWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQ 128 F GQ+ +E D+ + + D ++P + + ++++PR LLE+ Sbjct: 99 DHILLQFYRRGQSRVETDQGTGPVNEVQCIVFDLAQPVRI-VAGAVDATNVVIPRALLEK 157 Query: 129 YFPHQKPICAERLDADL-PMVQLSHRLLQESMN-NPALSETESEAALQAMVCLLRPVLHQ 186 H + LD D P +L H + + L E+ AA A+ L L Sbjct: 158 QGCHPDALHGRSLDHDGDPFGRLVHNFVANVVACGDLLDRREALAASAAITQLCASWLRG 217 Query: 187 RESVQPRRERQFQ-KVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYI 245 +E +P + + + +V L++ + L P IA G+S +LYR+FA G+V YI Sbjct: 218 QEEGRPAQHQDVRIRVRRLVEAELGNPKLTPALIATRLGLSRSTLYRLFAPNGIV--AYI 275 Query: 246 RNRRLDFCADAI--RHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKF 300 R+RRL + A +++ + F GFSD+ F FK+RFG P + ++ Sbjct: 276 RDRRLMAAMRMLVRDDAPKPLRVSQVAFAVGFSDERTFRRAFKRRFGFIPSDASQRL 332 >UniRef50_UPI0001909644 transcriptional regulator, AraC family protein n=1 Tax=Rhizobium etli CIAT 894 RepID=UPI0001909644 Length = 315 Score = 177 bits (450), Expect = 3e-43, Method: Composition-based stats. Identities = 64/270 (23%), Positives = 108/270 (40%), Gaps = 6/270 (2%) Query: 35 VLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGA 94 + + +L+ + + D + Q G A ++Q I A Sbjct: 42 RMVSAMLGACRLTRLEVDRHIVFGEHATAGPDDPDSIKLLVQTEGDACLDQGGLHAPISA 101 Query: 95 GDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRL 154 + + D SRP L +Q+ L LPR L + M ++ L Sbjct: 102 DALVIYDPSRPYMLTNSTPVRQLLLQLPRHALPHAAIERLTRPFTAHAEYDGMCRILLSL 161 Query: 155 LQESMNN-PALSETESEAALQAMVCLLRPV----LHQRESVQPRRERQFQKVVTLIDDNI 209 + +M+ L + Q MV L+R + L Q + + Q++ I+ + Sbjct: 162 MDSTMHEIGHLDAARRSSVGQTMVDLVRTMIGADLQQARPIANPLDLLLQRIKIFIESEL 221 Query: 210 REEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAAD-DEKLAG 268 L IA G SVR +YR F + L + YI + RL A +R A +++G Sbjct: 222 ARPDLSVTMIARRMGCSVRYIYRAFEVECLTPSDYIWDLRLQKAAARLRDAGGYAGEISG 281 Query: 269 IGFHWGFSDQSHFSTVFKQRFGMTPGEYRR 298 I F GFS +HFS F+ R+G++P ++R+ Sbjct: 282 IAFALGFSSSAHFSRAFRHRYGLSPSQWRK 311 >UniRef50_C4WLC6 Helix-turn-helix domain-containing protein n=1 Tax=Ochrobactrum intermedium LMG 3301 RepID=C4WLC6_9RHIZ Length = 370 Score = 177 bits (449), Expect = 4e-43, Method: Composition-based stats. Identities = 78/278 (28%), Positives = 122/278 (43%), Gaps = 10/278 (3%) Query: 29 TERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDER 88 + R G + + G L++VT + +R + + S F G+ + + Sbjct: 58 SGRLEGAIRSREIAGFTLASVTFNSQRYNRDRRIIAWSGLDQFLVAVVKGGEILGDAANN 117 Query: 89 QVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMV 148 + +GDI +LD ++ +S L+PR +L + H + L A LPM Sbjct: 118 SLTARSGDICILDLTQVLQSDVTAGG-TLSTLIPRGILAKATGHAN-LHGVVLQAHLPMT 175 Query: 149 QLSHRLLQES-MNNPALSETESEAALQAMVCLLRPVLHQR-----ESVQPRRERQFQKVV 202 QL L+ + LS E A +++V +L L E ++P Q+V+ Sbjct: 176 QLITAYLEGLNGLSEHLSNDEIVAVQESLVTILAAALQGLRATGIEELRPLSIALRQRVL 235 Query: 203 TLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHA-A 261 +D N+ L + I +S LYR FA+ G +A IR+RRLD I Sbjct: 236 DYVDRNLNNPELSLDLIIRRFNVSRAHLYRAFAEDGG-IAGVIRDRRLDAAFLEITQTDM 294 Query: 262 DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRK 299 +A I F GFS SHFS F++RFG+ PGE RR+ Sbjct: 295 IPRSIAKIAFEHGFSSASHFSRSFRERFGLMPGEARRE 332 >UniRef50_Q0K404 Formamidase fused to an AraC-type HTH DNA-binding domain n=6 Tax=Proteobacteria RepID=Q0K404_RALEH Length = 796 Score = 177 bits (448), Expect = 5e-43, Method: Composition-based stats. Identities = 65/301 (21%), Positives = 119/301 (39%), Gaps = 18/301 (5%) Query: 10 QQWLSQINQVCGNFTGRLLTERYTGVLDTHFA-KGLKLSTVTTSGVNLSRTWQEVKGSDD 68 W ++ + G +++ G++L+ + + L+ + D Sbjct: 27 AAWRDELRAARLHCESLCADHTLHGTIESRTTPAGIELTCIASVPQTLA-----ITSGDG 81 Query: 69 AWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQ 128 + G+A + E + + G + + L S + + + + + LL Sbjct: 82 RGLMLLMLTEGEAHLAAPELREPLRPGQVVCVPEHAARRLALATSFRMLIVHIGQALLSA 141 Query: 129 YFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQ-----AMVCLLRPV 183 P A L D +L RLLQ + + + A+Q CL + Sbjct: 142 RITAPLPRSALVLSGD--AAELFARLLQSMAASFDTIVSANAKAIQPFDNTITACLDAAL 199 Query: 184 LHQRESVQP----RRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGL 239 + S P R F +V + ID + E L IA + MS R L ++F G Sbjct: 200 ADSQPSAPPDMTPSRAAVFARVCSRIDARLAEPELSLAAIAADERMSARYLQKLFEKSGS 259 Query: 240 VVAQYIRNRRLDFCADAIRHAADDE-KLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRR 298 + Y+R RL+ C + + D+ ++ I + WGF+D SHFS F+++FG++P YR Sbjct: 260 SFSAYLRTSRLERCRADLANHQYDKLSVSDICYRWGFNDPSHFSHAFREQFGISPRAYRE 319 Query: 299 K 299 + Sbjct: 320 Q 320 >UniRef50_Q4KBB6 Transcriptional regulator, AraC family n=9 Tax=Pseudomonas RepID=Q4KBB6_PSEF5 Length = 348 Score = 177 bits (448), Expect = 6e-43, Method: Composition-based stats. Identities = 52/301 (17%), Positives = 110/301 (36%), Gaps = 10/301 (3%) Query: 5 VDNEFQQWLS-QINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEV 63 +D W + + G + D ++L+ + + + R + Sbjct: 19 LDQRLAFWEDYNASTLVGLKCNSYAEGGFAASQDNLQLSAMRLARIVGNEHVVERDTSMI 78 Query: 64 KGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPR 123 +G + + QD + G++ + +P + + +Q +P+ Sbjct: 79 RGVPKESIFVSLVTGSGSFFYQDGACQVLEPGELVVYRTDKPYLFGFSGAMRQFIFDIPQ 138 Query: 124 TLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN------PALSETESEAALQAMV 177 + + R + + +L R L E A +E E A + + Sbjct: 139 QQFAERCLKRFD-RPLRTSVESGVQRLLLRTLGERTRGFFQQPLCAEAEAYQEQAFELLA 197 Query: 178 CLLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADK 237 ++ + +R + I + + + L E +A +TG+S R L R+FA + Sbjct: 198 SIIAGHVGER-PINALSASYLLAAKQCIHEQLADPTLSCERVAAQTGISTRHLARLFALE 256 Query: 238 GLVVAQYIRNRRLDFCADAIRHA-ADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEY 296 + +++I +RL + + ++ I + GF+ Q+HF+ FK RF TP E Sbjct: 257 ETLPSRFILEKRLQQARQLLCSSQGAGLDISEIAYRHGFASQAHFARAFKSRFQQTPSEA 316 Query: 297 R 297 R Sbjct: 317 R 317 >UniRef50_Q1N9N6 Transcriptional regulator, AraC family protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1N9N6_9SPHN Length = 330 Score = 176 bits (447), Expect = 7e-43, Method: Composition-based stats. Identities = 64/270 (23%), Positives = 110/270 (40%), Gaps = 9/270 (3%) Query: 36 LDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAG 95 L + + +S + R V S + G + V + AG Sbjct: 33 LSAWHLGTIMVGRFQSSALAFDRDAALVATSGLDHLLVQLYVEGGFAGVAADHSVVVTAG 92 Query: 96 DITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLL 155 D+ + D ++ IS+L+PR L + + L A+ + + + Sbjct: 93 DVVIFDLAQGLKTRAT-DFTNISVLIPRPFLAHHCDDASRLHGHVLPANGAIAAMLGSYM 151 Query: 156 QESMNN-PALSETESEAALQAMVCLLRPVLHQR-----ESVQPRRERQFQKVVTLIDDNI 209 + ++ P L+ +++ A ++ V L+ +L + P F+KV ID + Sbjct: 152 RALVDRLPTLTPGDAQVAARSTVALVTTMLADQGGGGFAPTAPAPLSPFRKVAQEIDRRL 211 Query: 210 REEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAADDEK-LAG 268 RE L +A GMS +LYR F G +A YIR RRL A + A+ + + Sbjct: 212 REPSLDAASLAQSLGMSRATLYRTFQPVGG-IADYIRRRRLAVAAIILSSPANQRRKIGE 270 Query: 269 IGFHWGFSDQSHFSTVFKQRFGMTPGEYRR 298 I GF+ +S FS F+ FG+ PG+ R+ Sbjct: 271 IARDCGFASESAFSRAFRSAFGIAPGQARQ 300 >UniRef50_Q89RN6 Transcriptional regulatory protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89RN6_BRAJA Length = 336 Score = 176 bits (447), Expect = 7e-43, Method: Composition-based stats. Identities = 70/299 (23%), Positives = 116/299 (38%), Gaps = 8/299 (2%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEV 63 V ++ + + + + + + + GL ++ + V +R+ Sbjct: 15 PVAERLDRYRAILTHYDVSVPAGTDRDDFEVLAEAWLLGGLVAASTRMAPVRFTRSAALA 74 Query: 64 KGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPR 123 K F + G E D + G G + +LD +RP ++ ISL + R Sbjct: 75 KADGRNSFALLLLRRGAWSGEVDGEPISAGPGQVLVLDLTRPFD-GIATATDTISLDVER 133 Query: 124 TLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPV 183 + P + LD V L+ + PA+ E ++ A++ + LLR Sbjct: 134 DPIVSAAPDGLDLHGLVLDGAAGRV-LADHMALLRRRLPAMEENDALDAVRTTLDLLRGC 192 Query: 184 LH-----QRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKG 238 + + + R + ID N+ L I E G+S LYR+FA Sbjct: 193 FGVAARPREQGLARRDIAILHRASRFIDQNLGRNDLSVATICREIGVSRSVLYRVFAPL- 251 Query: 239 LVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 VA YIR RRL+ + A +D A I +GF Q+HFS F+Q FG +P R Sbjct: 252 AGVADYIRGRRLEAIHVLLDDADEDRWNAEIAAAFGFVSQAHFSRSFRQHFGYSPRIAR 310 >UniRef50_UPI0001B58744 AraC family transcription regulator n=1 Tax=Streptomyces sp. C RepID=UPI0001B58744 Length = 329 Score = 176 bits (447), Expect = 8e-43, Method: Composition-based stats. Identities = 67/304 (22%), Positives = 117/304 (38%), Gaps = 16/304 (5%) Query: 7 NEFQQWLSQINQVCGNFTGRLLTER---YTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEV 63 + F + ++ RL ER + G ++ S + S + RT + Sbjct: 10 DRFDWYSDIVSS--EVMPARLSCERPAEFQGEAAVLDLGEIRASRFSLSPLRSRRTAPMI 67 Query: 64 KGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCS---LYWQESSKQISLL 120 + D + G + Q + IGAGD+ L D SRP L + L+ Sbjct: 68 RRGDPEEYQLALLRKGATSLSQYRSECTIGAGDLMLWDTSRPSDNQMLTAGGQVQATILM 127 Query: 121 LPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN-----PALSETESEAALQA 175 LPR ++ + A R+ + M + + ++ P S A+ Sbjct: 128 LPRNIMPLRTQRLDQVLARRIPG-MGMAAILASFMTSLEDHGAECTPEELRRLSTVAVDL 186 Query: 176 MVCLLRPVLHQRESVQP--RRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRM 233 L L + + R + Q++ I+ N+ + L P +A +SVR+L+++ Sbjct: 187 AAACLAQQLDAEDQLPAEVRAQALVQRIHAFIEHNLGDPELNPSAVAARHHISVRTLHQL 246 Query: 234 FADKGLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTP 293 F + A+ R R AD A ++ I WGFS FS F++ +G+TP Sbjct: 247 FHGQESTNARIRRRRLERCRADLADPALAGRRVGAIAARWGFSGPVVFSRSFREAYGVTP 306 Query: 294 GEYR 297 E+R Sbjct: 307 TEFR 310 >UniRef50_A5V7R9 Transcriptional regulator, AraC family n=2 Tax=Sphingomonas wittichii RW1 RepID=A5V7R9_SPHWW Length = 367 Score = 176 bits (446), Expect = 9e-43, Method: Composition-based stats. Identities = 62/273 (22%), Positives = 109/273 (39%), Gaps = 12/273 (4%) Query: 40 FAKGLKLSTVTTSGVNL--SRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDI 97 FA + +S + GV RT +EV+ + F + G + Q+ R I G Sbjct: 52 FAGYIPISRHRSIGVRTVTRRTLKEVRSNTSDTFLIWLPIRGAVTITQNGRTATIEPGSF 111 Query: 98 TLLDASRPCSLYWQESSKQ----ISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHR 153 L + P + + Q + P L+ Q P K +CA L +++ Sbjct: 112 ALSYGNEPLCIATLSDADQEHLSYQITAPAHLVSQAIPEPKRLCAIPFSTTLGGARIARE 171 Query: 154 L-LQESMNNPALSETESEAALQAMVCLLRPVLHQRESVQPR----RERQFQKVVTLIDDN 208 L L L +EA + + L ++Q R RE + Q+++ ++ N Sbjct: 172 LFLSLYEEADNLDRASAEALALSGLHALFRTVNQEGVEHGRSLSVREVKLQRLMDYLELN 231 Query: 209 IREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAA-DDEKLA 267 + L E +A + G+S R L+ + KG Y+ RL+ + A ++ Sbjct: 232 YSDSELTTEKVAKDCGISTRYLHYLLKSKGTRFYDYLWQARLNNAYQQLTDPALARRTIS 291 Query: 268 GIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKF 300 I + GF +HFS F+ +F +P E R++ Sbjct: 292 EIAYAIGFKSSAHFSRAFRNQFARSPREVRQEM 324 >UniRef50_Q4KD45 Transcriptional regulator, AraC family n=4 Tax=Pseudomonas RepID=Q4KD45_PSEF5 Length = 323 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 57/296 (19%), Positives = 107/296 (36%), Gaps = 9/296 (3%) Query: 11 QWLSQINQVCGNFTGRLLTER-YTGVLDTHFAKG--LKLSTVTTSGVNLSRTWQEVKGSD 67 +W I + ++R + G L L LS + +S + SR+ +V Sbjct: 18 RWAEAIGNAYFPLSLEFSSDRPFQGNLRIWETPSSALALSRLRSSRLGYSRSKAQVSNDT 77 Query: 68 DAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLE 127 A + + + EQD R++ G P + + LP L Sbjct: 78 QACYLVTIPRRHEVLFEQDGRELHCRPGSFIFERGDAPYRFRYASDNDLWVFKLPEQALH 137 Query: 128 QYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPVLHQR 187 + DA + ++ L + L + ++ Sbjct: 138 GQLRGAERYTRFCFDARRGLGRIFADQLAMCAARFDECAPAARHMLLEQALATLLLTLRQ 197 Query: 188 ES------VQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVV 241 + Q++ + ++ ++ L P IA G+S+R L+++FAD + Sbjct: 198 DERVLSSESSSLAALHLQRIESYVEQHLGSAELNPRQIASACGISLRYLHKLFADSPFSL 257 Query: 242 AQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 ++IR +RL +R A + + WGF+DQ+ F+ F+Q+FG T E R Sbjct: 258 GEWIRQQRLCAVHRQLRDAHCRLSIGELAARWGFADQAQFARHFRQQFGCTASEVR 313 >UniRef50_Q0RZY7 Transcriptional regulator, AraC family protein n=1 Tax=Rhodococcus jostii RHA1 RepID=Q0RZY7_RHOSR Length = 310 Score = 175 bits (443), Expect = 2e-42, Method: Composition-based stats. Identities = 69/293 (23%), Positives = 121/293 (41%), Gaps = 8/293 (2%) Query: 12 WLSQINQVCGNFTGRLLTERYTGVLDTHFAK-GLKLSTVTTSGVNLSRTWQEVKGSDDAW 70 W I+ + +R+ G LD G+ L+ V T ++ RT + + D Sbjct: 12 WTRMISDTFIELGVKEADDRFRGALDQRELGRGVSLTRVETDPSHVLRTPRLTRDGCDDV 71 Query: 71 FYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYF 130 + +SG + +D +Q + +G +L AS P L + +S+++ L PR LL Sbjct: 72 LFL-MHVSGDGAVVKDGQQTPMPSGYGSLHAASDPYELKFATASREVVLQTPRRLLPSRE 130 Query: 131 PHQKPICAERLDADLPMVQLSHRLLQESMN-NPALSETESEAALQAMVCLLRPVLHQRES 189 Q + P +++ QE + + L E Q V LL VLH R Sbjct: 131 FEQLHRGPTGIAPQDPAMRVLWSFTQELLTVSNDLPTPLREEMGQTAVDLLLSVLHHRSL 190 Query: 190 VQPRR----ERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYI 245 + + E +Q + LI +N + E A + +S+R +F G+ A ++ Sbjct: 191 EESAKAVGPEAIYQSIKRLIRENACDPRFTIEVAAEQHHISLRYTQTLFTRSGMSPATFL 250 Query: 246 RNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 R+ R+ + D + + + GF D + F FK+ G+TPG +R Sbjct: 251 RSERIANAQRLLADPRQSDIPVESVAYRSGFVDVNTFIRAFKRAVGVTPGVWR 303 >UniRef50_D2UCS7 Hypothetical hth arac/xyls-type dna-binding domain transcription regulator protein n=1 Tax=Xanthomonas albilineans RepID=D2UCS7_XANAL Length = 330 Score = 174 bits (442), Expect = 2e-42, Method: Composition-based stats. Identities = 76/307 (24%), Positives = 128/307 (41%), Gaps = 19/307 (6%) Query: 7 NEFQQWLSQINQVCG----------NFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNL 56 +WL + + G F+ L + G ++ + L+ V +G Sbjct: 25 ERVPRWLDWMARSIGVDRPGVRARRKFSFSPLQPVFDGCINQLRLGNVHLAKVLATGHEF 84 Query: 57 SRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQ 116 T + + Q G + M D + AG++ +L +R Q + + Sbjct: 85 HLTLAD-NDEERPRILVALQHKGASRMVCDGVSTALRAGELAVLQVNRQFCFASQANVEN 143 Query: 117 ISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAAL-QA 175 + + +RL PM +L+ L++ + P L ++SE L QA Sbjct: 144 YFVWF--AQPRHAMKLVDEVALQRLCGPAPMQRLACSLIERLFSEPGLCNSDSEQFLAQA 201 Query: 176 MVCLLRPVLHQRESVQPRRER---QFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYR 232 + LL + VQP+ E + VV ++ N+R+ L PE IA G S R++YR Sbjct: 202 LTKLLELTFKESSDVQPQLEPNRPSREMVVQFVERNLRDPELSPESIARALGWSKRTVYR 261 Query: 233 MFADK-GLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGM 291 F G + Y+ RR++ CA +R ++ + GI + +GFS HFS +FKQ G Sbjct: 262 AFKGSDGESLNSYLWRRRVEQCAQELRGPG-NQSITGIAYSFGFSSSPHFSRLFKQHMGA 320 Query: 292 TPGEYRR 298 +P YRR Sbjct: 321 SPLRYRR 327 >UniRef50_C8X8B4 Transcriptional regulator, AraC family n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8X8B4_NAKMY Length = 313 Score = 174 bits (442), Expect = 3e-42, Method: Composition-based stats. Identities = 68/295 (23%), Positives = 113/295 (38%), Gaps = 8/295 (2%) Query: 6 DNEFQQWLSQINQVCGNFT----GRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQ 61 + W ++ ++ + + + L L + R Sbjct: 15 AEAYDAWSRMLSTTHLPWSITELVQDPQTGFGASVRRRHLADLVLVDCSCDPNAGVRGSH 74 Query: 62 EVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLL 121 E+ G+D + + L G+ ++ Q E Q + G + + D+ P +E + SLL+ Sbjct: 75 EIAGTDGGYLVMLMTLRGREVVRQGESQAALEPGSVVVWDSETPAEFLVREPLVKRSLLV 134 Query: 122 PRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN-PALSETESEAALQAMVCLL 180 P+ L + + + LDA P V L L L AA A + LL Sbjct: 135 PKAALAEVGARGELMTGSVLDATAPAVTLLSGYLDALSATIDQLPLGALPAARNATIELL 194 Query: 181 RPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLV 240 L + V ID ++R++ L ++ G+SVRSL+R F D G Sbjct: 195 AAALQEPVRVPQATAATRTVAEAYIDKHLRQQRLSAAEVSRAVGVSVRSLHRAFEDSGES 254 Query: 241 VAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGE 295 VA +IR R A A + + W ++D SHFS FK+ FG+ P + Sbjct: 255 VASFIRLR---RLARARDDLLAGMSVGQVARRWHYTDPSHFSRSFKRHFGVNPSD 306 >UniRef50_C3JDH7 Transcriptional regulator, AraC family n=1 Tax=Rhodococcus erythropolis SK121 RepID=C3JDH7_RHOER Length = 315 Score = 174 bits (442), Expect = 3e-42, Method: Composition-based stats. Identities = 57/299 (19%), Positives = 104/299 (34%), Gaps = 3/299 (1%) Query: 3 PAVDNEFQQWLSQINQVCGNFTGRLLTERY-TGVLDTHFAKGLKLSTVTTSGVNLSRTWQ 61 P++ QQW ++++ G + G + + ++ S L R+ + Sbjct: 9 PSLPESVQQWHCEMSETFGGLCPESSVDAAPVGTVSGVSLGDVGAFDISGSPQILRRSAR 68 Query: 62 EVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLL 121 K +G AI+ Q +R++ G + L D +L + + L Sbjct: 69 AAKRHGSDLLKICTVRTGSAILRQSDRELTAPPGAMILYDVEHSYALRFDGHWSCTVMTL 128 Query: 122 PRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLR 181 PR+ + D L + ++ + + + + A V L Sbjct: 129 PRSAVSLTERELNCALERTHDGRRGSGALLENFISGAVAS-QVDGSAAGLLGDAGVNLAS 187 Query: 182 PVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVV 241 VL Q + ++++ N+ L IAG +S R++ R F D L + Sbjct: 188 AVLMQGSAPATPGRSTREEILRYALRNLDSPDLSVASIAGALHLSPRTVQRHFGDGDLTL 247 Query: 242 AQYIRNRRLDFCADAIRH-AADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRK 299 + IR RL + + ++ + W F D FS FK FG P E R Sbjct: 248 SALIRRERLIRVRRDLTDVSLRGHSISILAARWCFHDAPAFSRAFKAEFGAAPSEVRNS 306 >UniRef50_B9JMB3 Transcriptional regulator protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JMB3_AGRRK Length = 333 Score = 174 bits (441), Expect = 4e-42, Method: Composition-based stats. Identities = 61/307 (19%), Positives = 108/307 (35%), Gaps = 13/307 (4%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLLTER---YTGVLDTHFAKGLKLSTVTTSGVNLSRTW 60 A F W I + L R + G + L + + R+ Sbjct: 20 APAERFDYWRDSICAAFDPMSPELQRNRRATFKGQISAWQLGESALMEIKAEHHDTGRSR 79 Query: 61 QEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGA-GDITLLDASRPCSL--YWQESSKQI 117 +++ + + Q +A + D + I G + L DA R + Sbjct: 80 KDIAQGSRDYVFIYRQ-QAEAWFDFDYQPGFISGFGSLALGDADRAFTTGPTRARPFHHY 138 Query: 118 SLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN-PALSETESEAALQAM 176 L +PR LL + I + A + L + P L+ E +L A+ Sbjct: 139 VLKVPRELLRPALANADDIATTVVSAPRGIGALLLAYFDAFVTEVPYLAPEEQTTSLNAL 198 Query: 177 VCLLR----PVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYR 232 L V + Q + Q + I N + L P +A G+S+R L+R Sbjct: 199 ASLAAVAHGRVARDYDPRQALQTAQLRLAKEFIARNAVDPRLSPMLVARALGISIRHLHR 258 Query: 233 MFADKGLVVAQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGM 291 +F G V+++I RL+ +R + + GF++ + F ++ +G+ Sbjct: 259 LFEVTGDTVSRHILRCRLEVARSRLRSPGFSHVTILELALECGFTNLATFYRAYRIAYGL 318 Query: 292 TPGEYRR 298 P EYRR Sbjct: 319 PPAEYRR 325 >UniRef50_Q89T46 Transcriptional regulatory protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89T46_BRAJA Length = 319 Score = 174 bits (441), Expect = 4e-42, Method: Composition-based stats. Identities = 55/298 (18%), Positives = 106/298 (35%), Gaps = 8/298 (2%) Query: 8 EFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSD 67 F+QW + CG G + L + L+ + +RT + Sbjct: 22 AFEQWRDRAFGACGLDIGPSHGDSIDCRLQISVVDNIALAIPEGASAQYTRTQSHLADGS 81 Query: 68 DAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLE 127 D + +G + Q+ V++ + L+D ++ + + ++ +PR L Sbjct: 82 DD-LVLIAAHAGLVRVGQNGHTVELAPAQMVLVDMGITGTVGHTDEDRFTTIRMPRRALL 140 Query: 128 QYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPVLHQR 187 P + ++ L + + + P L Q MV L+ +L Sbjct: 141 DINPRAEEKLSQVLADGAVAETIFRYHALAANHGPHLDAVGQRLTAQHMVDLVGLLLGTD 200 Query: 188 ESVQP------RRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVV 241 + + + + + L +A +G+S R R+F G Sbjct: 201 AEHASLMRGRGQAAARLDLMRADVMAALGRNDLCLAEVATRSGLSPRQAQRLFEQAGTTF 260 Query: 242 AQYIRNRRLDFCADAIRHA-ADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRR 298 +++ +RL + A K++ I GFSD S+F+ F++RFG TP E R Sbjct: 261 TEFVLEQRLLLARKLLGDPRARTRKISDIAHSSGFSDLSYFNRAFRKRFGATPSELRE 318 >UniRef50_B1T3D6 Transcriptional regulator, AraC family n=1 Tax=Burkholderia ambifaria MEX-5 RepID=B1T3D6_9BURK Length = 350 Score = 173 bits (439), Expect = 6e-42, Method: Composition-based stats. Identities = 70/302 (23%), Positives = 126/302 (41%), Gaps = 11/302 (3%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLLTERY-TGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 A++ + + W S + + + G L + L + ++T + R + Sbjct: 23 ALERKSEVWRSITELLFDGAPATDTQDAHLEGELFSRLVGSLLVVSMTCNAQRHRRDCRL 82 Query: 63 VKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLP 122 + S + SG E R + G GDI L D +R + + S IS+++ Sbjct: 83 IATSGLDHYVIRLFTSGMRDGECAGRPITSGPGDIGLFDLARTSEISTRGGSS-ISVIMA 141 Query: 123 RTLLEQYFPHQKPICAERLDADLPMVQLSHR-LLQESMNNPALSETESEAALQAMVCLLR 181 R+ +++ + + L A P+ L LL L+ E+EA AM+ LL Sbjct: 142 RSRIDKAMGG-RCLHGVVLRAGRPLTTLMADYLLSLVKVTGELTGIEAEAIESAMIALLA 200 Query: 182 PVLHQRESVQPRR----ERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADK 237 L++ + +K++ ID N+ L + + + +S LYR+F + Sbjct: 201 AGLNEENAEGAGAFSGPVFLRRKIIEFIDANLTNSDLGLDLLIRQFRVSRARLYRIFDLE 260 Query: 238 GLVVAQYIRNRRLDFCADAIRHAADD--EKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGE 295 G VA+ IR +RLD + + + + + + FSD S F F++RFG+TP E Sbjct: 261 GG-VAKIIREKRLDAAYQVLARPTEKELRSITEVAYMFCFSDGSQFLRAFRRRFGVTPRE 319 Query: 296 YR 297 R Sbjct: 320 AR 321 >UniRef50_C8SUL6 Transcriptional regulator, AraC family n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SUL6_9RHIZ Length = 339 Score = 173 bits (439), Expect = 7e-42, Method: Composition-based stats. Identities = 62/306 (20%), Positives = 123/306 (40%), Gaps = 18/306 (5%) Query: 6 DNEFQQWLS-QINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVK 64 + F W + ++ G + ++ L L ++ + + +R + Sbjct: 38 RDRFSLWQDIHVAEIWSVEYGTSENLPFQASIEATTVGELVLGQMSGTIKHATRKASNIA 97 Query: 65 GSDDAWFYTVF-----QLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISL 119 D+ + + LSG Q R+ +G G+ L+ A+ + + + ++ Sbjct: 98 DDDNDGYLLLINKADTLLSGT----QAGREYGVGRGEAVLVTAAEALKMGGADWNVWTNV 153 Query: 120 LLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQES-MNNPALSETESEAALQAMVC 178 ++PR +L Q FP A ++ A+ + L R Q P S A + +V Sbjct: 154 VVPRAILTQAFPQIDDRLALKIGAENEALDLLKRYCQLLEAGRPLASPDLIAHATETIVD 213 Query: 179 LLRPVLHQR------ESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYR 232 L+ V + ++ R + Q ++ I DN + + + +A E G+S R ++ Sbjct: 214 LIGLVTGAKGQRAELAGLRGLRAARLQAIMAKIADNFADPGISAQGVAQELGLSARYVHD 273 Query: 233 MFADKGLVVAQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGM 291 + + G + + RL + DD +++ I GFSD S+F+ F++RFG Sbjct: 274 LLQETGTSFTERVLELRLQRAHKMLSQRHNDDMRVSDIAMISGFSDVSYFNRCFRRRFGH 333 Query: 292 TPGEYR 297 TP R Sbjct: 334 TPTSAR 339 >UniRef50_D1XQJ8 Transcriptional regulator, AraC family n=2 Tax=Streptomyces RepID=D1XQJ8_9ACTO Length = 342 Score = 173 bits (438), Expect = 8e-42, Method: Composition-based stats. Identities = 60/311 (19%), Positives = 116/311 (37%), Gaps = 15/311 (4%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEV 63 A + F W + + + + + + + + + + Sbjct: 12 AAADRFDYWRELVGRTRASEMSSPYARDFHASMRLMQLGPVTVWPTSVLPARYRLSPRRA 71 Query: 64 KGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSL-----YWQESSKQIS 118 +DD ++ L G+ +E G D+ ++D S P L + + Sbjct: 72 HRTDDGLYHLTLLLEGELTLEHSGGTDTFGPCDLHVVDDSLPYDLRPSDGRASGPVRGVG 131 Query: 119 LLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLL-----QESMNNPALSETESEAAL 173 + P+ +L + + L + L L Q ++ PA + L Sbjct: 132 VDFPKAMLPLAPHRLRQVLGRGLPGGEGLGALLVGFLTGLEQQAAVLRPADAPRLGAVVL 191 Query: 174 QAMVCLLRPVLHQRESVQP--RRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLY 231 + LL L ++ P RR+ +++ I +N+ + L P +A +SV L+ Sbjct: 192 DLVSALLAQALDAESALTPESRRQVLLRQIDAFIRENLHDPELSPRAVAAAQHISVSHLH 251 Query: 232 RMFAD--KGLVVAQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQR 288 R+F + +G VA IR RL+ + A D+ + GI WGF FS F+ Sbjct: 252 RVFEEQAQGETVAARIRRLRLENARRDLEDPALRDDPVYGIAARWGFPRACGFSRAFRAA 311 Query: 289 FGMTPGEYRRK 299 +G++P E+R + Sbjct: 312 YGLSPREHRLR 322 >UniRef50_C9Z339 Putative AraC family regulatory protein n=2 Tax=Streptomyces RepID=C9Z339_STRSW Length = 324 Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats. Identities = 57/311 (18%), Positives = 109/311 (35%), Gaps = 15/311 (4%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEV 63 ++ F+ W + + + + L + + + R + V Sbjct: 8 PAEDRFEHWRELLGATRTSEAISTHSADFWAQLRLMELGPVIVWPASFLPTRYRRNQRMV 67 Query: 64 KGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLL--- 120 + SD ++ L G ++ +R G D+ L+D+SRP + + + + Sbjct: 68 RQSDPELYHLTLLLDGDLALDHADRCDTFGPRDLHLVDSSRPYDIRSADGGRTGVVRGVG 127 Query: 121 --LPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLL-----QESMNNPALSETESEAAL 173 P+ L + + L + L L Q PA + L Sbjct: 128 VDFPKALFPLPPHQVRQLLGRGLSGREGLGALLTDFLVGLERQADRLQPADAPRLGTVVL 187 Query: 174 QAMVCLLRPVLHQRESVQP--RRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLY 231 + L ++ P R Q++ I N+ + L P +A +S+ L+ Sbjct: 188 DLLSAWFAHALEAEAALSPETRVRALTQRIQAFIRQNLHDPELTPPVVAAAHHISLSYLH 247 Query: 232 RMFADK--GLVVAQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQR 288 R+F + G VA +IR RRL+ + + + I WG S F+ F+ Sbjct: 248 RVFQQQTGGETVAAWIRARRLEGARRDLADPSLSVTPIHVIAARWGMPRASDFTRAFRAA 307 Query: 289 FGMTPGEYRRK 299 G+ P E+R + Sbjct: 308 HGLAPREFRLR 318 >UniRef50_A5EGC6 Transcriptional regulator, AraC family n=1 Tax=Bradyrhizobium sp. BTAi1 RepID=A5EGC6_BRASB Length = 317 Score = 172 bits (436), Expect = 1e-41, Method: Composition-based stats. Identities = 71/288 (24%), Positives = 109/288 (37%), Gaps = 5/288 (1%) Query: 11 QWLSQINQVCGNFTGR-LLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDA 69 W + + GV+D LKLS V S + R + + + Sbjct: 19 AWAEGLANAFVRLDFEGPRGAPFAGVIDQADLGDLKLSRVRASAHGVWRRAEHARSARAD 78 Query: 70 WFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQY 129 + Q++G + Q R+ + D+ + D P ++ +E + I LPR L Sbjct: 79 LVFVNLQVAGVGVTAQGGRERRTAPFDLAVADTLAPFAIAHREPFELICAGLPRALAPPE 138 Query: 130 FPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPVLHQRES 189 + + R A + +L NPA + T + AA + + LL + Sbjct: 139 LMARGGVALSRTPAAREIARLLLG-CAGLALNPASTPTAAAAAARCFLDLLASAADSLDE 197 Query: 190 VQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRR 249 P R V I N R+ L A G+S R + ++ A G + + R Sbjct: 198 -APVRGLTAAHVRDYIGQNFRDATLSAARAARAFGVSERHIQKLLAGGGASFGETLAGLR 256 Query: 250 LDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 L+ A A AA +A I + GFSD S F FK RFG TP YR Sbjct: 257 LEAAAQA--LAAGGGSVAQIAYECGFSDLSTFHRAFKARFGETPAAYR 302 >UniRef50_B4UXL2 AraC-family transcriptional regulator n=1 Tax=Streptomyces sp. Mg1 RepID=B4UXL2_9ACTO Length = 334 Score = 172 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 66/310 (21%), Positives = 114/310 (36%), Gaps = 12/310 (3%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLL-TERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 A + F+ W + +++ R + G+ + + + RT + Sbjct: 15 APADRFESWRALMSETHAPMEMRSEHAADFWVNQRVISLGGITVYPLECRPLTFQRTPKL 74 Query: 63 VKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYW-QESSKQISLLL 121 + SD F+ G + + V G DI D SRP + S + I + + Sbjct: 75 IARSDPEAFHLSLIKRGAGAVTLGKDTVVHGVSDIHTSDTSRPFEISSGPHSVEIIGVEV 134 Query: 122 PRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN-----PALSETESEAALQAM 176 P+ LL +R+ A M L L + + A S + Sbjct: 135 PKALLPLPPHIAGRAIGKRISAREGMGALVATFLDQVTKDSRSYRAAEGPRLSGVLADLV 194 Query: 177 VCLLRPVLHQRESVQP--RRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMF 234 L VL S+ P R +V+ I DN + +L IA +SV L+R+F Sbjct: 195 ASLFAGVLEADRSLTPETHRRALALRVMAFIRDNADDPLLDVPAIAAAHHISVSYLHRVF 254 Query: 235 ADK--GLVVAQYIRNRRLDFCADAIRHAADDE-KLAGIGFHWGFSDQSHFSTVFKQRFGM 291 + G+ V+ +++ +RL + E + IG GF S FS F+ +G+ Sbjct: 255 QQEGDGVTVSAFLQGQRLARARQDLADPLHQEVPVHVIGARRGFRHASAFSRAFRDAYGL 314 Query: 292 TPGEYRRKFR 301 P +R + R Sbjct: 315 PPAAFRGQAR 324 >UniRef50_A5VEH1 Transcriptional regulator, AraC family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5VEH1_SPHWW Length = 307 Score = 172 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 64/306 (20%), Positives = 129/306 (42%), Gaps = 13/306 (4%) Query: 3 PAVDNEFQQWLSQINQVCGNFTGRLLTE--RYTGVLDTHFAKGLKLSTVTTSGVNLSRTW 60 PA + + S + G + + R G+L + V + V R Sbjct: 5 PASSDA-NHFASSLRAAYGVYDTEPTSSAIRSAGMLTPVSRGPFEGYLVHANAVRSKRPA 63 Query: 61 QEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLL 120 ++ + + + L+G ++ +RQ + AGD+ L+D+ P ++ ++ + L Sbjct: 64 --LRDRWEDCAFILMPLAGDIHVDHYDRQNVLSAGDMVLMDSHAPSTIDAFGRNRSVVLA 121 Query: 121 LPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVC-- 178 +PR+ + Q P + RL + + +L ++ A E ++ ++ + Sbjct: 122 MPRSTVSQLRPDSDRLFGRRLQGRKGIGNMLSAMLASIVDADAEEEMDARDSMLTLSVTM 181 Query: 179 -----LLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRM 233 L+ + R E + K+ + + +N + + E +A +S RSLYR+ Sbjct: 182 SLLDRLIENRPDSDSHRRSRAEAEIGKMRSWVVENAADPDMSIETLARRFALSRRSLYRL 241 Query: 234 FADKGLVVAQYIRNRRLDFCADAIRHAADD-EKLAGIGFHWGFSDQSHFSTVFKQRFGMT 292 F + G Q++ + RLD + ++ + F GF+D SHF+ +FK+RFG+ Sbjct: 242 FGEVGATPRQWLADVRLDEARKWLVAGDPRFRTVSQVAFAAGFNDSSHFTRLFKRRFGVL 301 Query: 293 PGEYRR 298 PG R Sbjct: 302 PGSLAR 307 >UniRef50_D1WYT1 Transcriptional regulator, AraC family n=2 Tax=Streptomyces RepID=D1WYT1_9ACTO Length = 331 Score = 171 bits (434), Expect = 2e-41, Method: Composition-based stats. Identities = 65/308 (21%), Positives = 109/308 (35%), Gaps = 13/308 (4%) Query: 4 AVDNEFQQWLSQINQVCGNFT-GRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 + F W +N + + + + L RT + Sbjct: 13 QPGDRFAGWQQYMNSMIAPMEITSSHADDFWADHRLLRIEDTLLWPARLHASCFRRTPRL 72 Query: 63 VKGSDDAWFYTVFQL--SGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQ-ESSKQISL 119 ++ SD + L SG +EQ + + A D+ LD SRP ++ E + + Sbjct: 73 IRQSDPGLLHMTLVLPGSGAMHVEQGRVRSAVEAHDLYFLDTSRPSGVWTDGEPIVGVGV 132 Query: 120 LLPRTLLEQYFPH-QKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVC 178 +PR+LL + RL L + + ++ A L ++ Sbjct: 133 DIPRSLLPLPMDTCLDEVLGRRLSGRHGFGALLTQFVTHLVDRAEEYGPADVARLHRVLL 192 Query: 179 LLRPVLHQRE-------SVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLY 231 L E + R + + I N + L P +A +S R L+ Sbjct: 193 DLAAGALAGELDRETALPPEARTGNLVLAIRSFIGSNFHDPGLTPGTVAAAHYISTRQLH 252 Query: 232 RMFADKGLVVAQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFG 290 R+F +G VA IR+RRL+ + D + I GF +HFS VF+ G Sbjct: 253 RLFHREGTTVATLIRSRRLERARLDLADPRLVDTPVQTIAARCGFGAPAHFSRVFRAAQG 312 Query: 291 MTPGEYRR 298 M+P +YR Sbjct: 313 MSPRDYRE 320 >UniRef50_B1M4E1 Transcriptional regulator, AraC family n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1M4E1_METRJ Length = 346 Score = 171 bits (434), Expect = 2e-41, Method: Composition-based stats. Identities = 57/297 (19%), Positives = 100/297 (33%), Gaps = 9/297 (3%) Query: 10 QQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDA 69 W + R + G + + SG+ R Sbjct: 20 DDWRDAVAPFWDFTIRREDLSDFRGQSRVRHLGTAIVCSARASGLEFVRARALTARMGVD 79 Query: 70 WFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQY 129 ++SGQ+ + R+ GDI L D S+P S + I+L+LPR L Sbjct: 80 HIVAHMRVSGQSRVTIGGRERDCAPGDICLFDLSQPLS-AASTDYEAITLVLPRPLFGAR 138 Query: 130 FPHQKPICAERLDADLPMVQLSHRLLQESMNN------PALSETESEAALQAMVCLLRPV 183 + + P ++ + L+ + P + A L Sbjct: 139 QSALDALHGSVIRGATPFGRMLNDHLRSLSAHATGFSEPEAAAAAEATAALLGAATLGLP 198 Query: 184 LHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQ 243 + + P R + ++ + L E I G+S +LYR+F G V+ Sbjct: 199 QDEGGTQPPERAPLLVAIRRFVEAELASADLSAETIGLRFGVSRSALYRLFVPLGG-VSG 257 Query: 244 YIRNRRLDFCADAIRHAADD-EKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRK 299 YIR RRL + +++ + + W F +HF+ F+ FG P + R + Sbjct: 258 YIRQRRLARAYRDLAAGDGRFARISEVAYRWRFESPAHFTQAFRAEFGCAPRDVRAQ 314 >UniRef50_C6WAU0 Transcriptional regulator, AraC family n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6WAU0_ACTMD Length = 305 Score = 171 bits (433), Expect = 3e-41, Method: Composition-based stats. Identities = 64/296 (21%), Positives = 116/296 (39%), Gaps = 8/296 (2%) Query: 10 QQWLSQINQVCGNFTGRLL-TERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDD 68 + W ++ + R+ ++G T L + + R ++V D Sbjct: 13 RAWERELASGPLPWAARVADAAGFSGAASTRRVDDLTVVDWESGAFAGVRGPRQVAAGDG 72 Query: 69 AWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQ 128 F SG + Q R+ + AGD ++ P S+L+PR +LE Sbjct: 73 DHFVARIVRSGSEVFAQGGREWVLRAGDAVAWESRSPARFAAAGPVATRSVLIPRDVLED 132 Query: 129 YFPHQKPICAERLDADLPMVQLSHRLLQESMN-NPALSETESEAALQAMVCLLRPVLHQR 187 + +P V+L L+ P L+ + AA A++ L L Sbjct: 133 VGCPL--VIGRPRPGRVPAVRLLAGYLESLAPLLPDLAPGPAVAARNALLELGWGALQPE 190 Query: 188 ESVQPRRERQFQK--VVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYI 245 + P+ ++ V +D + L + +A G+SVR+L R+F+ G + + Sbjct: 191 SPLDPQALAPARRAAVERYLDARLGRSDLGVDEVAAAHGVSVRTLGRLFSAGGETFSGVL 250 Query: 246 RNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKFR 301 R +R+ + + D +A + WGF D SH + F+ G++P EYR + R Sbjct: 251 RAKRVARVREELL--TGDSTVAALARRWGFFDTSHLNRRFRAVHGVSPHEYRARHR 304 >UniRef50_A0JW90 Transcriptional regulator, AraC family n=1 Tax=Arthrobacter sp. FB24 RepID=A0JW90_ARTS2 Length = 325 Score = 170 bits (432), Expect = 4e-41, Method: Composition-based stats. Identities = 62/300 (20%), Positives = 108/300 (36%), Gaps = 5/300 (1%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHF-AKGLKLSTVTTSGVNLSRTWQE 62 A N Q W + + R L E + + L+L+ V + + R+ Sbjct: 23 APVNRVQLWEGHNAKALISLDIRTLDESPLHAAEVNLQFPYLRLAHVRGTAQIVERSESF 82 Query: 63 VKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLP 122 ++ + F L+G A + G + DA P + E +++ L +P Sbjct: 83 IRQNPTEMVAIFFALAGDAFFYHRSGHELLKPGQAIMYDADLPFMRGFAEGLQELVLTVP 142 Query: 123 RTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRP 182 R L + R D P + L + ++ ++ A ++ L R Sbjct: 143 RPLFLELSGGTGLNRPVRFDFG-PGGVPQAQELARRIRTALAAQQPTDDAENTVLELFRS 201 Query: 183 VLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVA 242 + I+ + + L +A G+S R L R FA GL Sbjct: 202 IASG--GNAGSDAGYLAAAKGYIERHHGDPELSTAEVAAAVGISERQLGRAFAAAGLTPG 259 Query: 243 QYIRNRRLDFCADAIRHAADD-EKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKFR 301 +Y+ RLD + + A D + I GF Q++F+ FK+RF TP + R+ R Sbjct: 260 RYVLGLRLDRGQELLASPAADGLSIGEIAARVGFLSQNYFARTFKERFSATPLQTRKAAR 319 >UniRef50_B9NWW0 Putative transcriptional regulator n=1 Tax=Rhodobacteraceae bacterium KLH11 RepID=B9NWW0_9RHOB Length = 356 Score = 170 bits (432), Expect = 4e-41, Method: Composition-based stats. Identities = 55/297 (18%), Positives = 116/297 (39%), Gaps = 14/297 (4%) Query: 5 VDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVK 64 ++F + ++ VC + + G+ + RT +++K Sbjct: 20 AADQFDAFSLIVSPVCDLKRLSSINSGFHAKFSAFDLHGIDFVSWEVDPSTYERTREKIK 79 Query: 65 GSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRT 124 S F +G E + V+ GD+ L+ ++P + S +S+ + Sbjct: 80 NSSFDSCAIWFVRNGHIFNEHNNDLVKAETGDLMLISHAQPWKSHCVGRS-FVSVGINCD 138 Query: 125 LLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPA-LSETESEAALQAMVCLLRPV 183 +P+ D + L + ++ ++E + Q+ LL Sbjct: 139 KYSWMTSCNRPLL------DGSLKGLLRTFIAMLVDEAHNITEDQKPMLAQSFSDLLAAS 192 Query: 184 LHQRE-----SVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKG 238 + + + + V + ++ L ++I G+S R+LY +F + G Sbjct: 193 IEPTAENRYYATTALNTSRLKIVRDFVQRHLERPELNVDFICKSLGVSRRTLYNIFEEYG 252 Query: 239 LVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGE 295 VA+YI+ RL C A+ + D + ++ I + +GF++ S FS FK+++G +P E Sbjct: 253 G-VAKYIKTARLQACYKALSNNNDQKYVSTIAYQYGFTNISLFSRQFKEQYGFSPRE 308 >UniRef50_C6QB43 Transcriptional regulator, AraC family n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QB43_9RHIZ Length = 328 Score = 170 bits (432), Expect = 4e-41, Method: Composition-based stats. Identities = 66/308 (21%), Positives = 125/308 (40%), Gaps = 15/308 (4%) Query: 4 AVDNEFQQWLSQINQVCGN-FTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 + + F + + F + + + + LS + + R E Sbjct: 25 SARDGFSAFREIVAAAFMPWFMEHKSDQDFNARIVRLSGEFGSLSRTKMTPLLGLRNKSE 84 Query: 63 VKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLY--WQESSKQISLL 120 + S + Y + +SG+ ++ Q++ V GD+ L D++ P S + ++ Sbjct: 85 ISKSPEGSLYANYVISGRLVVTQNDVTVTAEKGDLVLYDSTLPVKHLKLGDTSFEDLAFC 144 Query: 121 LPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLL 180 +P+ + + + ++D P+ L +N + ++ E AAL L Sbjct: 145 IPKERIGRPDKTFDNLLVSKVDIIPPLASCFAFL----SHNISSAQPEELAALGGACAAL 200 Query: 181 RPVLHQRES-------VQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRM 233 P+ R + +++V ID I + L P A G+SVR +++ Sbjct: 201 LPISGGRSHEFRPDGIAEDASNHYARELVRFIDARIADAELCPSMAADNLGISVRYVHKQ 260 Query: 234 FADKGLVVAQYIRNRRLDF-CADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMT 292 FA G + Y+ +RRL+ D I + ++ + + WGF D S F FK++FG + Sbjct: 261 FAMLGTTFSSYVTSRRLERISHDLISGVGANPPISVLAYRWGFRDLSTFIRCFKRKFGCS 320 Query: 293 PGEYRRKF 300 P EYR KF Sbjct: 321 PREYRSKF 328 >UniRef50_C6XP47 Transcriptional regulator, AraC family n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XP47_HIRBI Length = 304 Score = 170 bits (431), Expect = 5e-41, Method: Composition-based stats. Identities = 59/288 (20%), Positives = 119/288 (41%), Gaps = 13/288 (4%) Query: 22 NFTGRLLTERYTGVLDTHFAK-GLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQ 80 F + G + G++L+ + S + + +E + + G+ Sbjct: 2 PFAPDSPSVPVDGRISVVATPMGVQLARIEASPLIIE--GKEADQGPG--LWLLLISEGE 57 Query: 81 AIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAER 140 A + + I G + L + S + I + +P ++ + Sbjct: 58 AEFKSKDLCAAIRPGRVLFGVTRHDSKLELKTSCRMIFIRIPTLVIGRRMLAPLRNNTGL 117 Query: 141 LDADLPMVQLSHRLLQESMNNPA-LSETESEAALQAMVCLLRPVL------HQRESVQPR 193 + + ++ LLQE N ++ E A ++V ++ L + Sbjct: 118 FKGENSLERILISLLQEIYNELEKFTKDELAAIETSLVDIIVTALATSGGGRSKGGAMGA 177 Query: 194 RERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFC 253 R F ++ +++ + E L + +A ETG+S R L ++F+ + + Y+R RRL+ C Sbjct: 178 RAAHFDRICQMLESLLGEPELTLDRVARETGVSPRYLQKIFSQENYSFSMYVRERRLERC 237 Query: 254 -ADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKF 300 AD I + + + F WGFS +HFS F++RFG++P ++R+K Sbjct: 238 YADLISPLYSQQSITQVAFRWGFSSSAHFSRTFRERFGVSPRQHRQKL 285 >UniRef50_Q602N6 Transcriptional regulator, AraC family n=1 Tax=Methylococcus capsulatus RepID=Q602N6_METCA Length = 331 Score = 170 bits (431), Expect = 6e-41, Method: Composition-based stats. Identities = 65/305 (21%), Positives = 118/305 (38%), Gaps = 14/305 (4%) Query: 7 NEFQQWLSQI-NQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKG 65 + F+ W +++ G + + +++ +G++ SRT + V+ Sbjct: 16 DRFEVWREMFCSKMWGLDIAHSDSRPFFARCRFVSLGAVEVIRSELNGLDFSRTPRRVRQ 75 Query: 66 SDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQE-----SSKQISLL 120 + F LSG Q ++ LL +P +L + + SL Sbjct: 76 QESDDFGFHLSLSGGVRAVQAGCHAEVRGAGGLLLAGGQPYTLSTPQMPGSAHYQCYSLH 135 Query: 121 LPRTLLEQYFPHQKPICAERLDADLPMVQLSHRL-----LQESMNNPALSETESEAALQA 175 LPR L Q P + AE P+ L L ++ +P L E L Sbjct: 136 LPRKELLQRVPDAERHLAEVCAGGEPLNLLVQYLDLVAGHDAALRSPDLRRLAGEHLLDL 195 Query: 176 MVCLLRPVLHQRESVQPRRERQFQKV--VTLIDDNIREEILRPEWIAGETGMSVRSLYRM 233 + L P Q R ++ V ++ + R+E L + A G+S L+R+ Sbjct: 196 VALTLEPGRDPESQFQRGGLRAARRAALVRYLEQHYRDERLSVKTAAAALGISESYLHRL 255 Query: 234 FADKGLVVAQYIRNRRLDFCADAIRHAADD-EKLAGIGFHWGFSDQSHFSTVFKQRFGMT 292 A+ G + + RL+ + D ++ I F GF+D ++F+ +F++RFG T Sbjct: 256 MAESGESFTEMVNRLRLERAKRMLEDPGCDGLRIGDIAFATGFNDFTYFNRLFRRRFGDT 315 Query: 293 PGEYR 297 P +R Sbjct: 316 PRTFR 320 >UniRef50_Q1YEQ1 Putative transcriptional regulator n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YEQ1_MOBAS Length = 349 Score = 170 bits (430), Expect = 7e-41, Method: Composition-based stats. Identities = 66/297 (22%), Positives = 119/297 (40%), Gaps = 7/297 (2%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEV 63 A+ + F+ + G L + + L + + V R+ Q + Sbjct: 24 ALKDRFEAYRDL---YAGGTEVIRLGAGFAAQFEARPLGELVIFERWLNNVAHERSAQRI 80 Query: 64 KGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPR 123 + F LSG ++E + + G+I +LD RP ++ ++ + R Sbjct: 81 RQDGFEHFVMQLNLSGVLVVETADGATTVKPGEIIILDTGRPYGNR-CGNAHVLTFSVAR 139 Query: 124 TLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPV 183 ++E+ + + + L A+ + L+ + + N L + LL Sbjct: 140 YVVERAYLGGQDLHGRILGAERGAL-LADFMASLTRNARTLPADAVNGMVGIFSELLMIT 198 Query: 184 LHQRESVQPRRER-QFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVA 242 L Q + R + + LI++ + L P IA + G+S LY MF G VA Sbjct: 199 LRQDDGTASAEARGKLKLAQELIEEGLSRHDLDPAVIAAKAGISRSRLYEMFKTHGG-VA 257 Query: 243 QYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRK 299 YIR RR+ + D +A + F GF+ +SH S F++ F M PG++RR+ Sbjct: 258 SYIRRRRVHRFRALLSQRRDMRSIAELAFACGFASESHASRTFREVFAMPPGQFRRR 314 >UniRef50_UPI0001B4F487 putative transcriptional regulator n=1 Tax=Streptomyces hygroscopicus ATCC 53653 RepID=UPI0001B4F487 Length = 301 Score = 169 bits (429), Expect = 8e-41, Method: Composition-based stats. Identities = 62/244 (25%), Positives = 105/244 (43%), Gaps = 19/244 (7%) Query: 75 FQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQK 134 Q SG + + QD R + G + DAS P +L E+ + L++PR L Sbjct: 4 LQESGTSTVHQDGRTESLLPGALAFYDASHPFTLVMPEAYRAKVLVMPRRALGLSEAELP 63 Query: 135 PICAERLDADLPMVQLSHRLLQESMNNPA----------------LSETESEAALQAMVC 178 + A + D + + ++ + L T + L + Sbjct: 64 HLIARPIQPDTALSAMLLPIISRLADGAGPHPWPIRRQIARTLLDLLATLATGVLDTLDT 123 Query: 179 LLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKG 238 L + R + R +V I+ ++ + L PE IA G+SVR L+++F + G Sbjct: 124 LGTGDMEDRRAGADR--AHLARVHAFINKHLADSGLSPETIARHHGISVRYLHKLFQEHG 181 Query: 239 LVVAQYIRNRRLDFCADAI-RHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 V ++IR RRL+ C + R +A + HWGF +HFS VF+ +GM+P E++ Sbjct: 182 TTVGRWIRQRRLEECRKELARGGRSSRTVAAVAQHWGFISPAHFSRVFRAAYGMSPREWQ 241 Query: 298 RKFR 301 +R Sbjct: 242 ALWR 245 >UniRef50_C9Z9W8 Putative DNA-binding protein n=1 Tax=Streptomyces scabiei 87.22 RepID=C9Z9W8_STRSW Length = 314 Score = 169 bits (429), Expect = 9e-41, Method: Composition-based stats. Identities = 64/297 (21%), Positives = 115/297 (38%), Gaps = 9/297 (3%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLLT-ERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 + W R E + D + L+ V + + R+ Sbjct: 19 PPAERLRAWEEHNADALIALKCRTPGGEDFRAREDNLALGRVHLARVCATAHVVERSADL 78 Query: 63 VKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLP 122 V+ L G+A+ +Q R+ + GD+ + DA + + ++++ + Sbjct: 79 VERRPTGSVAVYVSLRGEALFQQAGRRQVVRPGDVVVCDADGSFVRGFGQGLDELAVRVH 138 Query: 123 RTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRP 182 R L + +P+ +A+ P + RL+ S+ A + +A + L+ Sbjct: 139 REALPERAALGEPLIVRSSEAN-PYGRALARLVGRSVGGEAAIRPDEQAIVDLASALVSG 197 Query: 183 VLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVA 242 +R V I++ +R+ L +A G+SVR L R+FA+ G Sbjct: 198 GATRRPVV------HRALACARIEEQLRDPRLSAPEVAEAVGISVRQLTRVFAEAGTTFP 251 Query: 243 QYIRNRRLDFCADAIRHA-ADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRR 298 +Y+ RRL+ + A + A + GFS +HFS F RFG+T GE RR Sbjct: 252 RYVLGRRLELAYGVLTGPDAAQSRTASVAAMCGFSSVAHFSQTFHARFGVTAGELRR 308 >UniRef50_D0KWJ8 Transcriptional regulator, AraC family n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KWJ8_HALNC Length = 328 Score = 169 bits (428), Expect = 1e-40, Method: Composition-based stats. Identities = 63/269 (23%), Positives = 104/269 (38%), Gaps = 11/269 (4%) Query: 37 DTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQI-GAG 95 LK+ T S V + RT + + D + ++ G Sbjct: 51 SIWSLGDLKIGTFDGSAVKMVRTTKLAQDCADD-LIICIERKTPTRATWGGAGARVFVPG 109 Query: 96 DITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAER-LDADLPMVQLSHRL 154 DI L A + + + L +PRT+L + P+ E + + P +L R Sbjct: 110 DIHLWRADGTMQCETKGAFSALLLSIPRTVLSNHGIDIAPLLREGGICGNSPETRLLCRY 169 Query: 155 LQESMNN-PALSETESEAALQAMVCLLRPVLHQRESVQPR-----RERQFQKVVTLIDDN 208 + ALS L +V L VL R +V+ R + + + ID + Sbjct: 170 TDSVLGEVDALSPMGVSCCLSHLVDLAMLVLGGRNTVRLANRHRVRSVRLASIKSDIDAH 229 Query: 209 IREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAADDEKLAG 268 + L W+ +S R L +FAD+ +++ RRL A+ + ++ Sbjct: 230 LLNPELSVGWVLRRHRISERYLRSLFADEDTSFTRFVLERRLMRAHAALDQSG--RSISE 287 Query: 269 IGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 I + GFSD S F+ F+QRF MTP + R Sbjct: 288 IAYDCGFSDLSWFNRAFRQRFDMTPSQAR 316 >UniRef50_UPI0001B4D7D7 AraC family transcriptional regulator n=1 Tax=Streptomyces hygroscopicus ATCC 53653 RepID=UPI0001B4D7D7 Length = 320 Score = 168 bits (426), Expect = 2e-40, Method: Composition-based stats. Identities = 59/301 (19%), Positives = 108/301 (35%), Gaps = 11/301 (3%) Query: 6 DNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKG 65 + W + R L + L + + + R V+ Sbjct: 12 PDRVASWEAHNTASVAPLRCRALESGFHASRVRTTIGALDVLRTIATSHVIERDAGLVRD 71 Query: 66 SDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTL 125 L G++ + + + G LL +P + + + +PR+L Sbjct: 72 HPVDQVAVHMILRGESAFCTSDGVLTLRPGQ-VLLRGDQPFLHGYTGDLHDLVVGVPRSL 130 Query: 126 LEQYFPHQKPICAERLDADLP---MVQLSHRLLQESMNNPALSETESEAALQAMVCLLRP 182 ++ P + +D D P V RLL ++ + + L+ + L+ Sbjct: 131 YAEFTHGTPPSRPQVIDTDGPSGACVAALGRLLDGAVRSETFPRPDDATVLELLAVLISG 190 Query: 183 VLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVA 242 V + +++ ++ + L IA G+S R L R+FA + V Sbjct: 191 -----RRVPLSASAHYAAAREVVERHLHDPGLSATSIAARIGISERHLSRVFAAQDTTVP 245 Query: 243 QYIRNRRLDFCADAIRHAADDE--KLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKF 300 Q++R RLD + + E +A + GF+ SHFST F +RFGM P + R+ Sbjct: 246 QFVRALRLDRAHRMLATSGGRERLTVAEVAHRCGFASASHFSTSFAKRFGMRPTDLARQA 305 Query: 301 R 301 R Sbjct: 306 R 306 >UniRef50_UPI00016A440E helix-turn-helix- domain containing protein AraC type n=1 Tax=Burkholderia ubonensis Bu RepID=UPI00016A440E Length = 347 Score = 167 bits (423), Expect = 5e-40, Method: Composition-based stats. Identities = 62/311 (19%), Positives = 126/311 (40%), Gaps = 19/311 (6%) Query: 1 MNPAVDNEFQQWLSQ----INQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNL 56 + PA+ +E+ + +++ + G+ RL G L + L +S + + Sbjct: 13 VEPALRDEYWRQVTRPIVDTTPIAGHGDARL-----AGTLASRMLGELLMSRTSFNAQQY 67 Query: 57 SRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQ 116 R + ++ S + SG + + + +V+ GDI ++D +P ++ + Sbjct: 68 RRDRRTIQQSGFDQYVVQLVRSGSLVGDFNGVEVRACPGDIYIIDLGQPM-CSRVDAGES 126 Query: 117 ISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAM 176 +++ +PR LE+ + + L A+ + +L L + A+Q Sbjct: 127 VAVFVPREGLEKASGG-RDLHGVVLHANRAITRLLADYLVGMYELGEQASPAQAIAVQDA 185 Query: 177 VCLLRPVLHQRESVQPRR------ERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSL 230 + L + R +++V I ++ + L P+ + +S L Sbjct: 186 MVALFAAALAEAAAPAGRRPVTHGAALRRRIVQHISQHVTDRDLSPDTLMTHFRISRAHL 245 Query: 231 YRMFADKGLVVAQYIRNRRLDFCADAIRHAADD-EKLAGIGFHWGFSDQSHFSTVFKQRF 289 YR+F G VA++IR+RRLD A+ + + + + F +GFS +QRF Sbjct: 246 YRVFEADGG-VARFIRDRRLDLAYRALVDPRSNGQTIKEVAFRYGFSSSDMLVRAMRQRF 304 Query: 290 GMTPGEYRRKF 300 G T E R + Sbjct: 305 GATAREIRTEH 315 >UniRef50_D0XXU2 Transcriptional regulator, AraC family n=1 Tax=Caulobacter segnis ATCC 21756 RepID=D0XXU2_9CAUL Length = 341 Score = 167 bits (423), Expect = 5e-40, Method: Composition-based stats. Identities = 57/302 (18%), Positives = 118/302 (39%), Gaps = 13/302 (4%) Query: 6 DNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAK-GLKLSTVTTSGVNLSRTWQEVK 64 + W + ++ G E + + G++ + V + + + Sbjct: 14 AERAEAWRDAMGRLGLPIEGLSAGEPAAASVICLTSPLGIEFALVEAGAQTI--SGRL-- 69 Query: 65 GSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRT 124 A + L G+A + D+ V + GDI + +L S+ + + PR Sbjct: 70 SGQPAAVWLAVLLHGEATLVTDDLAVGVSPGDIAFGPTGQAAALRLDTRSRLLFVRAPRV 129 Query: 125 LLEQYFPHQKPICAERLDADLPMVQLSHRLLQ------ESMNNPALSETESEAALQAMVC 178 L+ + L+ + ++ LL+ E+++ L + C Sbjct: 130 ALDHRLIKPFNLRVGWLEGSEGVPRILSDLLRGTAEELENLSVDQLRPVDLALTEFLAQC 189 Query: 179 LLRPVLHQRESVQPRRE-RQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADK 237 LL +++ P Q++ I+ + + L +A E G+S R + ++FA Sbjct: 190 LLERGAAASDALDPSTPTAHLQRLCQTIETLLPDPDLSLRRVADEEGVSPRYVQKLFASA 249 Query: 238 GLVVAQYIRNRRLDFCADAIRHAADDE-KLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEY 296 + Y+R+RRL+ C + ++ I F WGF+ +HFS F++++G +P E+ Sbjct: 250 NETFSHYLRSRRLERCRIDLASPQHARLSISEICFRWGFNGSAHFSRAFREQYGRSPREF 309 Query: 297 RR 298 R Sbjct: 310 RN 311 >UniRef50_C7MQT8 DNA-binding domain-containing protein, AraC-type n=1 Tax=Saccharomonospora viridis DSM 43017 RepID=C7MQT8_SACVD Length = 347 Score = 167 bits (423), Expect = 5e-40, Method: Composition-based stats. Identities = 57/270 (21%), Positives = 107/270 (39%), Gaps = 11/270 (4%) Query: 40 FAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITL 99 +++ ++ + + RT ++++ SD + V +G ++ G GD+ + Sbjct: 45 PLDSMRMWAMSFAPMMFHRTPEQIEQSDPDTYNLVLLRAGTMRRVDATSEMTYGPGDMHV 104 Query: 100 LDASRPCSLYWQES--SKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQE 157 D+S P L I + +P+ LL + +L A M L +L Sbjct: 105 NDSSLPFQLEAHGCHMVSCIGVEVPKRLLPLPNDRVAALVGRKLSAREGMGGLLATVLDH 164 Query: 158 SMNNPAL-----SETESEAALQAMVCLLRPVLHQRESVQP---RRERQFQKVVTLIDDNI 209 + + + + + L L E P R ++ ID ++ Sbjct: 165 LITGHGSYRSTDAPRLAVVLRETLAGLFARTLQDEEQYVPTAAYRRDLLLRMRMFIDQHL 224 Query: 210 REEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAADD-EKLAG 268 + L P IA +S+ ++R+F D G VA +IR RRL+ + A + Sbjct: 225 SDPELGPRLIAAAHNVSISYVHRLFGDDGTTVAGWIRARRLERARRDLCDPAMRIVPVHH 284 Query: 269 IGFHWGFSDQSHFSTVFKQRFGMTPGEYRR 298 I WGFS + F+ F+ +G+ P ++RR Sbjct: 285 IAARWGFSHHAAFTRAFRTAYGIAPRDFRR 314 >UniRef50_C5SNU8 Transcriptional regulator, AraC family n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SNU8_9CAUL Length = 317 Score = 166 bits (421), Expect = 7e-40, Method: Composition-based stats. Identities = 53/306 (17%), Positives = 114/306 (37%), Gaps = 15/306 (4%) Query: 6 DNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAK-GLKLSTVTTSGVNLS-RTWQEV 63 W+ + ++ R G + G + + + ++ S R Sbjct: 14 AERQAAWVDVLRRLKLPVADLSSLSRVRGSVMVTTTPLGCEFAVLDSTPQTYSGRNPDH- 72 Query: 64 KGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPR 123 + + G+ I+E + I + +L + + + +P+ Sbjct: 73 ----SSAVWLAVLARGEGILEYSGETTVLSPRSIIFGASGVDSTLRLTSDFRMLFIKIPQ 128 Query: 124 TLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN-PALSETESEAALQAMVCLLRP 182 + L + ++ + LL + AL + Q+M+ L Sbjct: 129 LAVSPRMITPLGQRVGILPGGSGLEKMFNGLLLSLADTLEALDGDHFQPVEQSMIEFLVA 188 Query: 183 VLHQRESVQP------RRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFAD 236 L ++ R +++ I+ + + L +A E G+S R + ++F Sbjct: 189 CLASDGRIESKGGAAGARAFHLRRICQKIETLLHDPELSLLKVAAENGVSPRYVQKLFTG 248 Query: 237 KGLVVAQYIRNRRLDFC-ADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGE 295 + + Y++ RRL+ C AD I ++ I F WGF+D +HFS F++RFG++P + Sbjct: 249 AQMTFSNYLKTRRLERCYADLISPVHAQLSVSEICFRWGFNDAAHFSRTFRERFGLSPSK 308 Query: 296 YRRKFR 301 +R+ + Sbjct: 309 HRQSSQ 314 >UniRef50_Q0S130 Transcriptional regulator n=1 Tax=Rhodococcus jostii RHA1 RepID=Q0S130_RHOSR Length = 315 Score = 166 bits (420), Expect = 1e-39, Method: Composition-based stats. Identities = 54/296 (18%), Positives = 108/296 (36%), Gaps = 6/296 (2%) Query: 6 DNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKG 65 W Q++ + L + Y G L ++ +L LSRT +++ Sbjct: 15 RERGDWWRDQVSSIHCPMAFSL-ADSYRGTLQHQYSDTYQLVRWWGEAEVLSRTAADIRR 73 Query: 66 SDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTL 125 + + + G+ I+EQD R+ I + L L + ++ ++PR Sbjct: 74 HPHGAYELLLPVRGEVILEQDRREATITPAVMALTSLDTATVLRHGDGFSSVAFVIPRER 133 Query: 126 LEQYFPHQKPICAERLDADLPMVQLSHRLLQESMN-NPALSETESEAALQAMVCLLRPVL 184 +E P P LDA + ++ ++ L+ ++ +A +V L+ Sbjct: 134 IEARVPTLPP-AGTVLDATSGLGRIVVDVVSSLRRERHELTGSQFDAIADRIVDLVALAY 192 Query: 185 HQRESVQPRR--ERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVA 242 + + E + + +N + L +A G S+R + G + Sbjct: 193 NADTAAPSVDVQEGLVTAIRRFVRENAHDPNLTGAVVATRLGWSLRHVQAQLQRIGTTPS 252 Query: 243 QYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 IR RL ++ + + + + GF D S FS +++ FG P + R Sbjct: 253 DLIREERLALARLRLQDRGWSHQSVTQVAYSSGFGDLSTFSNAYRRAFGERPSDTR 308 >UniRef50_B5WCL9 Transcriptional regulator, AraC family n=1 Tax=Burkholderia sp. H160 RepID=B5WCL9_9BURK Length = 338 Score = 166 bits (420), Expect = 1e-39, Method: Composition-based stats. Identities = 52/304 (17%), Positives = 113/304 (37%), Gaps = 8/304 (2%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLLTER-YTGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 W + R R + + L + + + R E Sbjct: 18 PAARRLDIWADLLTSAMIPLYVRSTNPRAFESTMSVAACGPLTVVRQSGTPHVCGRGRSE 77 Query: 63 VKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLP 122 + S ++ + L+ + + + GD+ L+D+ C + + +++ +P Sbjct: 78 LARSSQRQYHLMMSLNHTYRLSHRN-DLYLSPGDLALVDSDLVCDIALIRWYEFLNIGIP 136 Query: 123 RTLLEQYFPHQKPICAERLDADLPMVQLSH----RLLQESMNNPALSETESEAALQAMVC 178 L+++ P + R+ +L+ E++ N + + A++ Sbjct: 137 VEWLKRWVPDAGCLVGRRIPGHSNWGAALSAYVTQLVPEALANAPIPRGVLADQIGALLA 196 Query: 179 LLRPVLHQRESVQPRRERQFQ-KVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADK 237 L+ + +E +R + +V + E L E +A G+SVR+L+R A Sbjct: 197 LIAHEMSGQEPHSKPADRSLRDRVSDCLAQRCHEHGLTAEAVADSLGISVRTLHRALAGC 256 Query: 238 GLVVAQYIRNRRLDFCADAIRHA-ADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEY 296 A+ + + R++ + + IG GF+D SHF+ V ++R G+TP + Sbjct: 257 QQTFAEQLLDARVNCAQRMLESKIFSRMTVGEIGRRAGFADPSHFTRVMRRRLGVTPLQL 316 Query: 297 RRKF 300 R + Sbjct: 317 RIRC 320 >UniRef50_Q38ZZ8 Transcriptional regulator, AraC family n=1 Tax=Burkholderia sp. 383 RepID=Q38ZZ8_BURS3 Length = 344 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 73/313 (23%), Positives = 121/313 (38%), Gaps = 30/313 (9%) Query: 4 AVDNEFQQWLSQ--INQVCG----------NFTGRLLTERYTGVLDTHFAKGLKLSTVTT 51 + F W +Q I++ F G L G H + Sbjct: 17 SPAERFNAWQTQYSISEFALTAPIDPIIDYQFIGYTLGNISIGKWTYHHPGNAAV----P 72 Query: 52 SGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQ 111 L+R+ ++ + + +G E D R V + GDI ++D +RP Q Sbjct: 73 LSYTLNRSAAFIRRDGVDNYSFNLRDAGSVHGEIDGRPVFVQPGDILVVDQARPYHREIQ 132 Query: 112 ESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMN-NPALSETESE 170 I+LL+ R +L + + + QL L+ ++ LS++E+ Sbjct: 133 AG-DAITLLVARDMLPNL---PSSVHGTLFNG--GISQLLDSFLRSLLDKIGTLSQSEAL 186 Query: 171 AALQAMVCLLRPVLHQ-RESVQPRRERQFQ----KVVTLIDDNIREEILRPEWIAGETGM 225 QA + L++ +L + + R K+ I N+ L P+ I E G+ Sbjct: 187 HVEQATLSLVKAMLSPTAQEISNARSELLSTLYVKIKAYIRQNLESPDLSPDRICKEIGI 246 Query: 226 SVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHA-ADDEKLAGIGFHWGFSDQSHFSTV 284 S SLYR+F G VA YIR RRL A+ + ++ + + +GF+ + S Sbjct: 247 SRSSLYRLFEQDGG-VANYIRKRRLLAIHRALMSPESPRHRIGDLAYRYGFNSNTQLSRA 305 Query: 285 FKQRFGMTPGEYR 297 FK FG P E R Sbjct: 306 FKLEFGHAPSETR 318 >UniRef50_Q1QJK3 Transcriptional regulator, AraC family n=1 Tax=Nitrobacter hamburgensis X14 RepID=Q1QJK3_NITHX Length = 332 Score = 164 bits (415), Expect = 4e-39, Method: Composition-based stats. Identities = 54/308 (17%), Positives = 113/308 (36%), Gaps = 11/308 (3%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLL-TERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 + W Q + + G ++VT S V +SRT + Sbjct: 22 PARDRLPVWREVFGQTMVRLDIEPAKGTSFHAEGELCALPGAAFASVTVSPVRVSRTQRL 81 Query: 63 VKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLP 122 + + V + Q R+ + AGD L S + ++ ++ ++ + Sbjct: 82 IADDMADMVFLV-TADAPLRIAQRGREQVLDAGDAIFLRGSECSVIQCRDRARFTNISVS 140 Query: 123 RTLLEQYFPHQKPICAERLDADLPMVQLSHRL--LQESMNNPALSETESEAALQAMVCLL 180 L +++ + + M+ L ++ P E A + Sbjct: 141 IDDLTPMLANREDVSLTVVSRQNEMLDFLVGYVSLLQARQKPCSDELGRIATAHIRDLMA 200 Query: 181 RPVLHQRESVQPRRER------QFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMF 234 + + + P RER + + + + I ++ E L + IA G+S R + ++F Sbjct: 201 AMIGAEPDCGSPARERGGVRAARLRAIKSDIGTHLCEPGLSIDMIAARHGISPRYVRKLF 260 Query: 235 ADKGLVVAQYIRNRRLDFCADAIRHAADDE-KLAGIGFHWGFSDQSHFSTVFKQRFGMTP 293 D+ + ++ + RL++ + +A I GFSD S+F+ F++R+ +TP Sbjct: 261 QDEHTTFSDFVLSLRLEWSRRLLLSPGHATCTIASIAHASGFSDLSYFNRTFRRRYAVTP 320 Query: 294 GEYRRKFR 301 + R R Sbjct: 321 SDIRNGIR 328 >UniRef50_B0T4I1 Transcriptional regulator, AraC family n=1 Tax=Caulobacter sp. K31 RepID=B0T4I1_CAUSK Length = 316 Score = 164 bits (415), Expect = 4e-39, Method: Composition-based stats. Identities = 55/304 (18%), Positives = 116/304 (38%), Gaps = 14/304 (4%) Query: 6 DNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAK-GLKLSTVTTSGVNLSRTWQEVK 64 + W ++++ G E + + + G++ + V + + + Sbjct: 14 AERAEAWREAMSRLGLPIEGLSDAEPASASVVCLTSPLGIEFALVEAGAQAI--SGRL-- 69 Query: 65 GSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRT 124 A + LSG+A + D+ ++ GDI + +L + + + + PR Sbjct: 70 SGQPAAVWLAVLLSGEAALVTDDLAEELTPGDIAYGPTGQAAALRLETRCRLMFVRAPRV 129 Query: 125 LLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN------PALSETESEAALQAMVC 178 L+ + RL+ + + LL+ + + L E +C Sbjct: 130 ALDHRLIAPVNLRVGRLECATGVAHILSGLLRATADGLEDLTVDQLRPVELALTEFLAIC 189 Query: 179 LLR--PVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFAD 236 L+ + Q++ I+ + + L +A E G+S R + ++FA Sbjct: 190 LVEGGATTDILGAGSGAPTAHLQRLCQTIETLLPDPDLSLRRVADEEGVSPRYVQKLFAS 249 Query: 237 KGLVVAQYIRNRRLDFCADAIRHAADDE-KLAGIGFHWGFSDQSHFSTVFKQRFGMTPGE 295 + Y+R RRL+ C + ++ I F WGF+ +HFS F+ ++G +P E Sbjct: 250 ADETFSHYLRTRRLERCRTDLASPQHARLSISEICFRWGFNGSAHFSRAFRDQYGQSPRE 309 Query: 296 YRRK 299 +R+ Sbjct: 310 FRQS 313 >UniRef50_A5HV12 Probable transcriptional regulator n=1 Tax=Pseudomonas putida RepID=A5HV12_PSEPU Length = 311 Score = 163 bits (414), Expect = 4e-39, Method: Composition-based stats. Identities = 58/281 (20%), Positives = 115/281 (40%), Gaps = 17/281 (6%) Query: 21 GNFTGR----LLTERY-TGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVF 75 NF R L + ++ G + + A L+ + T +V GSD Y + Sbjct: 34 ENFEPRGRAILRSSKFGAGEIYSALAPSQVLAHIN--------TRSDVDGSDS--VYIIQ 83 Query: 76 QLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKP 135 +G ++ + R + + G TL+D+ L ++ + + LP LE + + Sbjct: 84 IRNGGMEVKSNGRAIFLADGSCTLVDSRLNFRLSSNATTNGLIVRLPERWLESWLTNPDD 143 Query: 136 ICAERLDADLPMV-QLSHRLLQESMNNPALSETESEAALQAMVCLLRPVLHQRESVQPRR 194 A+ + +D L LL + S + + + LL + + + Sbjct: 144 YAAQEIKSDTGWGKSLCSLLLNLDPMDAEQLGNHSNSLSEHIALLLSLSKREASHLSEGK 203 Query: 195 ERQ-FQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFC 253 R ++++++++ + L PE I+ G+S R L+ FA G ++ + + RL Sbjct: 204 NRSKIREILSMLETELSNINLSPELISERLGVSKRHLHYQFAACGTTFSKELLDIRLKHA 263 Query: 254 ADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPG 294 + A + + I GF D SHFS F++++G+ P Sbjct: 264 YKLLSDGATAKSVLEIAMTTGFCDSSHFSKKFREKYGVPPK 304 >UniRef50_A0KD53 Transcriptional regulator, AraC family n=9 Tax=Burkholderia cepacia complex RepID=A0KD53_BURCH Length = 350 Score = 163 bits (414), Expect = 6e-39, Method: Composition-based stats. Identities = 66/301 (21%), Positives = 118/301 (39%), Gaps = 19/301 (6%) Query: 6 DNEFQQWLSQINQVCG-NFTGRLLTERYTGVLDTHFAKGLKLS----TVTTSGVNLSRTW 60 + F W+ + +C L LS + RT Sbjct: 20 PDRFHVWVKDM--LCDYRLDDDGGHGPCDAEATGAALGPLILSGRHWHSRAPTYTVRRTP 77 Query: 61 QEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLL 120 + ++ L G+ ++ GAGD+ + D ++ E+ ISL+ Sbjct: 78 RRIRLDGQDSIRFTLLLGGRLASHTGGPELIKGAGDLFVYDVAQINDCKV-EAGDVISLV 136 Query: 121 LPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLL 180 +PR LL H + L + + + ++ ++L N P L + + +Q+M+ LL Sbjct: 137 VPRYLLPA---HAAQAHGQTLTSGVGRL-VADQMLSLFRNLPNLRMQDVPSIVQSMLLLL 192 Query: 181 RPVLHQ-----RESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFA 235 + ++ P +V ID ++ E L PE I + G+S LY++F Sbjct: 193 AAAVSPSAQALNDARGPIDHALVDRVRRYIDLHLLEPDLTPERICRDIGVSRARLYQLFK 252 Query: 236 DKGLVVAQYIRNRRLDFCADAIRHA-ADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPG 294 ++G V + I RRL + +++A I + GF D+ +F +FK FG TP Sbjct: 253 EEGG-VMRQITRRRLRHAYHVLGDPQRRHQRIAEIAWAHGFPDEKYFHRLFKAEFGHTPK 311 Query: 295 E 295 E Sbjct: 312 E 312 >UniRef50_B8HJB6 Transcriptional regulator, AraC family n=1 Tax=Arthrobacter chlorophenolicus A6 RepID=B8HJB6_ARTCA Length = 292 Score = 163 bits (413), Expect = 6e-39, Method: Composition-based stats. Identities = 58/293 (19%), Positives = 103/293 (35%), Gaps = 8/293 (2%) Query: 11 QWLSQINQVCGNFTGR-LLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDA 69 W + R L L+++ V + + R+ +E+ Sbjct: 1 MWEEHNARALVGLQARTLAGGGLKATELNLNLPRLQVAQVWGNPHVVERSAREIAAHPAD 60 Query: 70 WFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQY 129 F L G+ + + G+ L DA +P + K+++L +PR+ L + Sbjct: 61 AVVAYFTLEGEGFFYHQDGCEILRPGEAILYDADQPFMRGFSHGLKELALKIPRSTLREL 120 Query: 130 FPHQKPICAERLDADLPMVQ--LSHRLLQESMNNPALSETESEAALQAMVCLLRPVLHQR 187 + P + + L + + + + LL L Sbjct: 121 TRQSGLKRPKVFGFHGPQAERIYAGALASSLGAALSGRAGDWDELENTALELLAVTLGAP 180 Query: 188 ESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRN 247 I + L IA G+S R L R+FA+ G V + I N Sbjct: 181 AGPAG----HLAAAQAFISLQSADPQLSAGRIAAAVGISERQLSRIFAEGGTSVPRAILN 236 Query: 248 RRLDFCA-DAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRK 299 RL+ + AA L+ + GF+ Q+HFS V+K++FG++P + RR Sbjct: 237 ARLEAARQQLLSPAAARIPLSALALQQGFASQAHFSRVYKEKFGLSPLQDRRS 289 >UniRef50_A9GLT2 Transcriptional regulator, AraC family n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GLT2_SORC5 Length = 278 Score = 163 bits (412), Expect = 8e-39, Method: Composition-based stats. Identities = 63/270 (23%), Positives = 117/270 (43%), Gaps = 6/270 (2%) Query: 33 TGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQI 92 V+ +H ++ + R+ + + + Q+ G ++EQ ++ Sbjct: 8 RAVVSSHPLGAGEMMMIDGGP---PRSVHAPRSATGGGHAVLLQIEGGCVIEQSAAVCEL 64 Query: 93 GAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQ-KPICAERLDADLPMVQLS 151 G + +LD S+ SS L R + + + D + +L Sbjct: 65 TPGSMVILDDSKRTVRTATGSSHAQRWLFARVPSRSFGGGMFERAPLRVMTKDNAVDRLL 124 Query: 152 HRLLQESMNN-PALSETESEAALQAMVCLLRPVLHQRESVQPRR-ERQFQKVVTLIDDNI 209 H L+ ++ P ++ + EA L A+ R +++ + R + ++ + I+ + Sbjct: 125 HDLVLNLWSSAPHINGVQQEAGLAALDASARMSSAAQDARRTARVHVRVERAIEFIEREL 184 Query: 210 REEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAADDEKLAGI 269 + L E +A +S R L +FA G V +IR RRL A+A++ + D KL + Sbjct: 185 ADPDLTAERVASAQRVSRRHLDGLFAASGSSVEAWIRERRLQRAAEALKRGSPDTKLLAV 244 Query: 270 GFHWGFSDQSHFSTVFKQRFGMTPGEYRRK 299 GFS QS+FS F +RFGMTP E+R++ Sbjct: 245 AVESGFSSQSYFSRAFARRFGMTPTEWRKR 274 >UniRef50_Q0FRN2 Transcriptional regulator, AraC family protein n=1 Tax=Roseovarius sp. HTCC2601 RepID=Q0FRN2_9RHOB Length = 288 Score = 163 bits (412), Expect = 9e-39, Method: Composition-based stats. Identities = 64/265 (24%), Positives = 101/265 (38%), Gaps = 14/265 (5%) Query: 47 STVTTSGVNLSR----TWQEVKGSDD---AWFYTVFQLSGQAIMEQDERQVQIGAGDITL 99 S + + + R + + G + +F G Q ++G G L Sbjct: 14 SRMALGPIEILRQGQGLSRHINGETPVAAPGYDLIFPAHGSLSFCQAGLTGEVGPGGYVL 73 Query: 100 LDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESM 159 L + R L Q Q + LP LE R M L R L ++ Sbjct: 74 LRSDRFYELRAQGDLSQWRVRLPAAALEDRLVAVDTHVGARFAPHPQMAALVARTLSATL 133 Query: 160 N----NPALSETESEAALQAMVCLLRPVLHQRESVQPR--RERQFQKVVTLIDDNIREEI 213 +PA L A++ L+ ++E R R R Q++V I+ ++ + Sbjct: 134 QVFRQSPAPRPEALAGELVALIALMIGSEGEQEGNLGRTGRNRTRQRIVAHIERHLGDPG 193 Query: 214 LRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIR-HAADDEKLAGIGFH 272 L PE IA G+S LY +FA+ VA +IR RRL + + + ++ + + Sbjct: 194 LAPEGIARAMGVSRSYLYALFAEGNETVAGFIRTRRLQAAYEMLLADSRGGLAISEVAYR 253 Query: 273 WGFSDQSHFSTVFKQRFGMTPGEYR 297 GF SHFS F + F TP R Sbjct: 254 TGFKSVSHFSRSFSRHFQATPRSVR 278 >UniRef50_B1FSR0 Transcriptional regulator, AraC family n=1 Tax=Burkholderia graminis C4D1M RepID=B1FSR0_9BURK Length = 347 Score = 163 bits (412), Expect = 9e-39, Method: Composition-based stats. Identities = 65/311 (20%), Positives = 118/311 (37%), Gaps = 17/311 (5%) Query: 2 NPAVDN-EFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVN----- 55 P + F+ W ++N + + ++ + L T + L + T +G Sbjct: 11 EPYPNEQRFEVWRDEVNAIFDVDIEKSVSSSFNYDLSTGYIGSLLMGCGTWAGQQEPVAY 70 Query: 56 -LSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESS 114 + R+ Q ++ FY ++ ++ I +LD +R Sbjct: 71 GVKRSAQMIRRDGLDHFYLCLGITHSLSGYAARTPIEAEPSKIYVLDLARELDSEIVAG- 129 Query: 115 KQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQ 174 + L + R LLE + L + + L ++ P LS + Q Sbjct: 130 DTVILTIARDLLEPRI-RSANLHGAVLQGPMSAL-LGDHMISLRRQLPYLSPADMPYIEQ 187 Query: 175 AMVCLLRPVLHQRESVQPRRE-----RQFQKVVTLIDDNIREEILRPEWIAGETGMSVRS 229 A + ++ L E +V ID N+ L P+ I + G+S Sbjct: 188 ATLAMVSAALAPSAQTLADAENEINHALLVRVRRYIDANLTAAQLSPQQICRDVGISRAH 247 Query: 230 LYRMFADKGLVVAQYIRNRRLDFCADAIRHAADD-EKLAGIGFHWGFSDQSHFSTVFKQR 288 LYR+FA + VA YI+ RRL + + ++L+ + F + F +SHFS F+Q Sbjct: 248 LYRLFARE-SGVAAYIQQRRLAKIREILESPKGRKQRLSTLAFQYSFKSESHFSRSFRQA 306 Query: 289 FGMTPGEYRRK 299 FG +P + R + Sbjct: 307 FGCSPSDARER 317 >UniRef50_A5EU33 Transcriptional regulator, AraC family n=1 Tax=Bradyrhizobium sp. BTAi1 RepID=A5EU33_BRASB Length = 338 Score = 163 bits (412), Expect = 9e-39, Method: Composition-based stats. Identities = 56/300 (18%), Positives = 106/300 (35%), Gaps = 10/300 (3%) Query: 7 NEFQQWLSQINQVCGNFTGRLLTER-YTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKG 65 W QV + + GL+L + +SR+ + Sbjct: 20 ERAALWREHYGQVMLRVDFEPAPQVVFKARNRAMTLPGLQLFDAWATPARVSRSGCYLAH 79 Query: 66 SDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTL 125 D +G A + ++ G LL + PC+ + + +LL+PR Sbjct: 80 GADN-VILAINRNGVAFVASGNESCELREGQAVLLSGADPCAFHRASPGRSFTLLVPRMA 138 Query: 126 LEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETE-----SEAALQAMVCLL 180 +E + + AD +QL M++ ET+ + + Sbjct: 139 IEAADVSVEDAIMRPIPADRGALQLLDHYASLLMSSGDAIETQLLNLSIRHVQDLLALAI 198 Query: 181 RPVLHQRESVQPR--RERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKG 238 P ++++ R R + + I N L +A + ++ R + R+F G Sbjct: 199 GPTADLGDTMRARGLRAARLKLAKAFILANSARHDLSIVVVADKLNVTPRYVQRLFEIDG 258 Query: 239 LVVAQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 + ++ RL + A +A I + GF D SHF+ F++++G+TP E R Sbjct: 259 TTFSAFLSGVRLTNAHRMLCDPACRSLAIASIAYDVGFGDLSHFNRSFRRQYGLTPREVR 318 >UniRef50_C6XP49 Transcriptional regulator, AraC family with acetamidase/formamidase activity n=2 Tax=Alphaproteobacteria RepID=C6XP49_HIRBI Length = 771 Score = 162 bits (410), Expect = 1e-38, Method: Composition-based stats. Identities = 56/276 (20%), Positives = 115/276 (41%), Gaps = 17/276 (6%) Query: 34 GVLDTHFAK-GLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQI 92 G L + ++ + + ++ E F+ + L G + + I Sbjct: 37 GELASFKTGQNIQFIRIACTSQTIAMNLDE----GQPCFWMILALEGGVTVTSSKSSKDI 92 Query: 93 GAGDITLLDASRPCSLYWQESSKQISLLLPRTLL--EQYFPHQKPICAERLDADLPMVQL 150 GDI ++ P L + S+ + + +P TL + P QK I L ++ M ++ Sbjct: 93 KEGDIIYGGSNTPIKLTLLKESRFLIICVPDTLPVLKSRVPLQKDI--SNLVSETTMGRM 150 Query: 151 SHRLLQESMN-NPALSETESEAALQAMVCLLRPVLHQRESVQPRRERQF------QKVVT 203 LL+ + +++ + A+ + L + +++ Sbjct: 151 FSGLLRSVADVIADVTDDQLRPIETALPEFIAATLINNAPAKELGGAAGAKAALLERIFQ 210 Query: 204 LIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHA-AD 262 I+ + + L IA E G+S R L ++F G + ++++RRL+ C +R Sbjct: 211 SIEIRLSDPDLNVYQIAKEQGVSTRYLQKLFETTGDSFSHFVKDRRLERCRLDLRSPLHA 270 Query: 263 DEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRR 298 ++ I F WGF+D + FS F++++G++P +YRR Sbjct: 271 QRTISEILFQWGFNDSASFSRAFREKYGISPRDYRR 306 >UniRef50_B7KY13 Transcriptional regulator, AraC family n=4 Tax=Methylobacterium extorquens group RepID=B7KY13_METC4 Length = 331 Score = 162 bits (409), Expect = 2e-38, Method: Composition-based stats. Identities = 64/292 (21%), Positives = 109/292 (37%), Gaps = 8/292 (2%) Query: 10 QQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDA 69 + W+ I+ + +T ++ H + + + RT ++ Sbjct: 18 RAWIDAISPIFHATVDEAVTVPPHVLMKNHNLQRCLFGVLRAPRQRIERTPSQISLQAVD 77 Query: 70 WFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQY 129 L G A ++ + GD T+ D S+ I+LL+PR L++ Sbjct: 78 HLLIRIYLDGTACVDAGGGDRAVKPGDFTIFDLSQVMR-SDTGEIASINLLMPRRSLDRR 136 Query: 130 FPHQKPICAERLDADL-PMVQLSHRLLQESMNNPALSETESEAALQ-AMVCLLRPVLHQR 187 P+ DL P+ QL L+ ++ +L A V L +L Sbjct: 137 LGDLSPLHGRVFRQDLTPLTQLMGDHLRSLATCVEAADAWQRDSLSIATVALCNAMLTPE 196 Query: 188 ESVQPRRERQFQ--KVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYI 245 P + ID ++ L + + G+S +LY +F G VA YI Sbjct: 197 GGDTPYTPDTMLGIAIRQFIDGDLTAYDLDADKLTARFGISRTNLYALFEPDGG-VASYI 255 Query: 246 RNRRLDFCADAIR--HAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGE 295 RNRRL + +++A IG+ GF + FS FK+R+G+ P E Sbjct: 256 RNRRLARAMRILAGIERGPRQRIASIGYACGFETEKSFSRAFKRRYGVNPSE 307 >UniRef50_B7L1S2 Transcriptional regulator, AraC family n=1 Tax=Methylobacterium chloromethanicum CM4 RepID=B7L1S2_METC4 Length = 261 Score = 161 bits (408), Expect = 2e-38, Method: Composition-based stats. Identities = 66/254 (25%), Positives = 113/254 (44%), Gaps = 6/254 (2%) Query: 54 VNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQES 113 + +SRT + + + Q SG+ ++EQD QV + GD+TLLD + P + ++ Sbjct: 1 MTVSRTRRHIASDATDGIFVCRQFSGRLVLEQDGYQVGLEPGDVTLLDPAVPYAAHFFGG 60 Query: 114 SKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAAL 173 S+ + + R LE + + A L A+ S L + LS + Sbjct: 61 SELLVFKVRRNALEGRVGRTRALTARALPANADGRLTSAYLGLLPFHANGLSAAVGASVE 120 Query: 174 QAMVCLL-----RPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVR 228 ++ L+ R + R +V ++ N+ + +A G+S+R Sbjct: 121 PQLLDLIALSFSRALAGTAARGSSARSLARTRVRAAVEANLCDRSFGVAAVAQAAGVSIR 180 Query: 229 SLYRMFADKGLVVAQYIRNRRLDFCADAIRHAAD-DEKLAGIGFHWGFSDQSHFSTVFKQ 287 + AD+ + Q ++ RRL+ C A+ A D K++ I + WGFSD SHF F+ Sbjct: 181 YANAVLADESTSIMQLLQTRRLERCRQALADPAQADRKVSEIAYGWGFSDMSHFGRRFRA 240 Query: 288 RFGMTPGEYRRKFR 301 FGM P E+RR + Sbjct: 241 LFGMLPSEFRRSTQ 254 >UniRef50_Q0S609 Possible transcriptional regulator, AraC family protein n=1 Tax=Rhodococcus jostii RHA1 RepID=Q0S609_RHOSR Length = 326 Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats. Identities = 59/277 (21%), Positives = 105/277 (37%), Gaps = 10/277 (3%) Query: 30 ERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQ 89 + G + + + +++ L+ +EV+ + + QL G EQD R+ Sbjct: 24 DGIPGWVRSEALVETNCAEISSCTQLLTHGPREVRRAPLDALFVNLQLEGTCHGEQDGRR 83 Query: 90 VQIGAGDITLLDASRPCSLYWQES-----SKQISLLLPRTLLEQYFPHQKPICAERLDAD 144 + G + D +RP +L ++E + +S +PR A +D Sbjct: 84 CIVHPGSYAVFDTTRPYTLEFREPDDAASWRVLSFRIPRDQWSANVRGVGA-TARAIDTT 142 Query: 145 LPMVQLSHRLLQESMN-NPALSETESEAALQAMVCLLRPVLHQRES---VQPRRERQFQK 200 + ++ PA +T ++ +L V + R Q Sbjct: 143 SGPGNVVGAMMSSLWRERPAFDQTTVRTLERSFTDVLAAVTEPPAGGTRTEGRDAALRQI 202 Query: 201 VVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHA 260 V I + + A E +SVR+L+R+F G A+ +R+ RL + A Sbjct: 203 VRHYIRSAVPLGRVTAAAAAREAAVSVRTLHRLFQAVGATFAECVRDERLQGAMQDLAVA 262 Query: 261 ADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 D ++ I WGF D SH + F+ G TP E+R Sbjct: 263 PDSVTVSEIAARWGFYDSSHLTRTFQSCLGCTPTEFR 299 >UniRef50_C7HYF2 Transcriptional regulator, AraC family n=1 Tax=Thiomonas intermedia K12 RepID=C7HYF2_THIIN Length = 312 Score = 160 bits (406), Expect = 4e-38, Method: Composition-based stats. Identities = 57/298 (19%), Positives = 129/298 (43%), Gaps = 12/298 (4%) Query: 10 QQWLSQINQVCGNFTGRLLTERYTGVL-DTHFAKGLKLSTVTTSGVNLSRTWQEVKG--- 65 W +++ L + G + FA L ++ +T ++ + Q + Sbjct: 14 ASWEQLLSRRFVPGHTSLTSADPGGHIGQEVFAGALSMTPLTLQPQIITHSAQHLSALSA 73 Query: 66 SDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRT- 124 + + G+ ++EQ ++ AGD++ + +P + ++ ++ I++ +PR Sbjct: 74 DVRDTVLSHIVIEGEGVIEQKGATLRFRAGDLSFRNLQQPSRIVFETPARLIAVRMPRGA 133 Query: 125 -LLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPV 183 L Q ++ + R+ A + + LL S S A + Sbjct: 134 LLWHQARSDRRQLLRPRVVASYGL----NTLLPVSDQGSVSSLYAGFALPWLFAAAYYSI 189 Query: 184 LHQRESVQPRRERQFQKVVTLIDDNIRE-EILRPEWIAGETGMSVRSLYRMFADKGLVVA 242 E +P ++Q+V++ ++ ++ + L P A G+S R LYR+ + +G+ + Sbjct: 190 ERDAEPAKPPNATRWQQVLSYVETHLFDASALSPADCARAVGISERYLYRLASLRGITFS 249 Query: 243 QYIRNRRLDFCADAIRHAADDE-KLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRK 299 + +++RRL+ + H A +A + + GF++ +HFS ++Q FG +P + R+ Sbjct: 250 RLVKHRRLETARALLEHPASRHVSIASVAYQCGFTEPAHFSRAYRQHFGQSPRQSRKS 307 >UniRef50_B9JNE0 Transcriptional regulator protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JNE0_AGRRK Length = 376 Score = 160 bits (406), Expect = 4e-38, Method: Composition-based stats. Identities = 58/303 (19%), Positives = 108/303 (35%), Gaps = 12/303 (3%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLLTER--YTGVLDTHFAKGLKLSTVTTSGVNLSRTWQ 61 A ++F W + + + + ++ + + G+ + + R+ Sbjct: 44 APIDQFAAWQAYVAPLMDIQRPDVSSQDTEFVADHASWNLGGMLVVQQNAPPHSYMRSQA 103 Query: 62 EVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLL 121 +V+ ++ +G E D + G++ L P + S+ +SL L Sbjct: 104 KVRSDLIDHWHVSILRNGHMWTEVDGHVSEGEPGNVELRSLGHPFRGRSTQ-SRSLSLYL 162 Query: 122 PRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPA------LSETESEAALQA 175 PR L + L +L L N + L Sbjct: 163 PRELFFDIPGSTEIKNNTALSGTY--TKLLIEYLDSLEENLSRFAAKDLPHVVQTTRDMI 220 Query: 176 MVCLLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFA 235 + C+ + S Q +++ L+ N+ L EW+ E G+S LY++ Sbjct: 221 LTCVSSSAVDATVSEQHSNWALMERMRRLVQRNLMSPDLTTEWLCRELGVSRTRLYQLLE 280 Query: 236 DKGLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGE 295 G + YI+ RRL A+ + +++ I F GFS +HFS F + FG +P E Sbjct: 281 PDGG-IHHYIQRRRLLSAHAALSDITNRQQIGDIAFAVGFSSAAHFSRAFSKEFGYSPRE 339 Query: 296 YRR 298 R Sbjct: 340 ARN 342 >UniRef50_Q89NH4 Transcriptional regulatory protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89NH4_BRAJA Length = 355 Score = 160 bits (404), Expect = 6e-38, Method: Composition-based stats. Identities = 54/273 (19%), Positives = 102/273 (37%), Gaps = 9/273 (3%) Query: 33 TGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQI 92 +H +L G + RT V D + SG + + +++ Sbjct: 79 AASFTSHVLPEAQLLIGGLCGARVVRTKHLVA-DGDDSLALIVNRSGVLGISERGHDLRL 137 Query: 93 GAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLS- 151 AG+ L A SL +PR +L + ++L Sbjct: 138 RAGEAVLTSAEDVTIFERLSLGSGFSLRVPRRVLAPMIVDVDDAVMRVIPESTTGLRLLV 197 Query: 152 ----HRLLQESMNNPALSETESEAALQAMVCLLRPVLHQRESVQPR--RERQFQKVVTLI 205 + ++ + PA+ + + +L H RES R + + QK LI Sbjct: 198 DYAIALVHEKVLAVPAMRQLGVAHLHDLLALVLGATDHARESTGRRGIKAARLQKAKFLI 257 Query: 206 DDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAA-DDE 264 +N ++ + +A E G++ R L R+F G + ++ +RL +R + Sbjct: 258 VNNCWQQDISVANVAQELGVTPRYLQRLFEADGKTFSSFLTEQRLKRAHRMLREPDFAER 317 Query: 265 KLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 ++ I + GF D S+F+ F++ +G TP + R Sbjct: 318 PVSSIAYDVGFGDLSYFNRCFRRAYGATPSDVR 350 >UniRef50_B1M4R6 Transcriptional regulator, AraC family n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1M4R6_METRJ Length = 313 Score = 160 bits (404), Expect = 6e-38, Method: Composition-based stats. Identities = 66/297 (22%), Positives = 114/297 (38%), Gaps = 10/297 (3%) Query: 7 NEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGS 66 + F W S + G G L T+ ++ + + RT V+ Sbjct: 21 HAFDYWRSTVLARVDATPLAPDVPFAAGRRLAITRHGAVLHTL-SNPIGVERTALHVRRD 79 Query: 67 DDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLL 126 V L G +EQ + AGD+T+ +P ++ ++S ++I L +PR Sbjct: 80 GRDDIAIVLLLQGSGYVEQGNGGALLSAGDVTVHAMDQPFAIGSRDSYEEIRLQVPRAAF 139 Query: 127 EQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN-PALSETESEAALQAMVCLLRPVLH 185 + RL A P+ L L+ LSE E+ AL+ ++ LLR + Sbjct: 140 LSQVGSVQAFAGRRLRA-TPLSGLFATYLRSFSETIGGLSEAEAGIALEGVLHLLRALAD 198 Query: 186 QRESVQPRR---ERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVA 242 + + + I+ + + PE + +S LY F VA Sbjct: 199 GQGEKAGDDLSGDAVRALALAHIERRLHDPAFGPEALPAALRVSRSRLYAAFTGD-EGVA 257 Query: 243 QYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRK 299 IR+ RLD +R ++A + GF+D + FS F++RFG+ P + + Sbjct: 258 AKIRDARLDRAYRRLR---GGTRIASVMTSCGFTDAATFSRAFRRRFGVAPRDVLER 311 >UniRef50_Q89UQ2 Transcriptional regulatory protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89UQ2_BRAJA Length = 401 Score = 160 bits (404), Expect = 7e-38, Method: Composition-based stats. Identities = 62/302 (20%), Positives = 114/302 (37%), Gaps = 11/302 (3%) Query: 6 DNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKG 65 + +Q + +C + + T A L + + RT + Sbjct: 72 PSALRQLRAMTVDIC-DVIALTDENDFHITTTTVMAGNALLVDSRATDLEYDRTPAHIAR 130 Query: 66 SDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESS---KQISLLLP 122 + + G+ R+V + GDI LLD ++P ++ S +++++ Sbjct: 131 GGLDHYQMTLCIEGEMRFSSGRREVTLRPGDICLLDMAQPNRTVFRGGSGRTHLMAIIVQ 190 Query: 123 RTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRP 182 R++L H A L +D P +L P EA ++A+ ++ Sbjct: 191 RSMLAPRLAHPDSATATLLPSDHPHARLLASHYAALALPPEPEAGSVEATIEAIADIVAA 250 Query: 183 VLHQRESVQ-----PRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADK 237 + R + I DN+ + L + +S +LYR+F Sbjct: 251 AAGGTADIAEGVERAERHLYLAMIKRRIADNLETDALGVSELCRHFQISRATLYRLFEAD 310 Query: 238 GLVVAQYIRNRRLDFC-ADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEY 296 G +A Y+R +RL+ + AA D++L + FS S F F+++FG+TPGE Sbjct: 311 GG-LAHYVREQRLNLAFQRLLSPAAQDKRLIDLAVGLRFSSDSTFIRAFRRKFGLTPGEL 369 Query: 297 RR 298 R Sbjct: 370 RE 371 >UniRef50_B2WW34 Transcriptional regulator n=1 Tax=Streptomyces albus RepID=B2WW34_9ACTO Length = 335 Score = 159 bits (402), Expect = 1e-37, Method: Composition-based stats. Identities = 66/311 (21%), Positives = 113/311 (36%), Gaps = 15/311 (4%) Query: 4 AVDNEFQQWLSQINQ--VCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQ 61 A + + + V + ++ GL L + SG + R + Sbjct: 25 APRERAEAFRHALTDSLVPNDIAHEEPETGIHARMELWSVGGLDLFSTRNSGFEVRRGER 84 Query: 62 EVKGSDDAWFY-TVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLL 120 V+ Q G E R+ +G DI + P + W S++ Sbjct: 85 HVRHHRSRPVVSVSLQPRGTHRAEVAGRRNLLGQDDICVFHELSPRTYGWSGDGSSQSIM 144 Query: 121 LPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPA--LSETESEAALQAMVC 178 + P + + A PM L L+ +P ++ +EA A Sbjct: 145 F--DMDRLGVPVETVVGAAPHLRASPMYDLVLNHLRGVWRDPGRLAADPGAEALATATTG 202 Query: 179 LLRPVL-------HQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLY 231 L+R +L E +V+ ++ + L PE IA E +SVR+LY Sbjct: 203 LVRALLLSAALSDDSPAVRSALDETLLTRVLAYARRHLADRDLTPERIAQEHAVSVRALY 262 Query: 232 RMFADKGLVVAQYIRNRRLDFCADAIRHAADDE-KLAGIGFHWGFSDQSHFSTVFKQRFG 290 + D G+ + Q++ RL + + D +A + GFS SHFS F+ +G Sbjct: 263 LLLNDAGISLEQWLITERLARARQMLAASRYDRLTVAAVAARCGFSSPSHFSRRFRAAYG 322 Query: 291 MTPGEYRRKFR 301 +PG++RR R Sbjct: 323 SSPGDWRRLSR 333 >UniRef50_A0SZ23 Putative transcriptional activator araC family n=2 Tax=Janthinobacterium lividum RepID=A0SZ23_9BURK Length = 352 Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 62/303 (20%), Positives = 121/303 (39%), Gaps = 13/303 (4%) Query: 8 EFQQWLSQINQVCGNFTGRL-LTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGS 66 + W + + R L+ + LDT+ + T V R+ Q + Sbjct: 48 QLLAWRDYLGRFLDLQVRRQQLSNGFHAELDTYLLPDMAYLDSRTDAVTQLRSNQRISTD 107 Query: 67 DDAWFYTVFQLSG---QAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPR 123 F + G + + +Q G I LD ++P S+ + ++ LPR Sbjct: 108 SMRDFVFHIAVQGIIETSTARASAKALQYTPG-ILALDMNQPMSMARPTRAHVLAFFLPR 166 Query: 124 TLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN-PALSETESEAALQAMVCLLRP 182 + + P + I + P+ ++ L+ P+L + E ++ L+ Sbjct: 167 AAVSAHLPDAEAIHGRIVGYTTPLTRMLLGYLKILCQRLPSLPADQQEQTIRTCARLIIA 226 Query: 183 VLHQRESVQP-----RRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADK 237 +++ ++ R ++ I N+ EE L P+ + ++ ++YR+F + Sbjct: 227 AFAKQQRLEEHGRAVARAALQGQIEHYIQANLHEEHLTPDGVMRAFPVARSTIYRLFESQ 286 Query: 238 GLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 G +A YIR+ RL A + + + IG GF+ S FS F + +GM+P +YR Sbjct: 287 GG-LAAYIRHCRLRDAARELT-SMRHLAVTQIGLGLGFNSASDFSRAFSRAYGMSPRDYR 344 Query: 298 RKF 300 +F Sbjct: 345 EQF 347 >UniRef50_B6YY47 Transcriptional regulator, AraC family n=1 Tax=Pseudovibrio sp. JE062 RepID=B6YY47_9RHOB Length = 345 Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 50/298 (16%), Positives = 106/298 (35%), Gaps = 14/298 (4%) Query: 10 QQWLSQINQVCGNF---TGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGS 66 ++W + + G + E + + + ++T+ + R+ Q + Sbjct: 17 EEWREGVAEASGEVCLSSSSASPEAFGAGVRGSRYQSGFVATINATPHRFIRSSQRIARD 76 Query: 67 DDAWFYTVFQLSGQAIMEQDER-QVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTL 125 + F + R V I G + + D + P + S KQ++L LPR Sbjct: 77 GMDAVFVQFYDHTHNCVTHMGRHSVDIEPGHLIIQDMAEPFVVEH-SSYKQMTLALPRAT 135 Query: 126 LEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN-PALSETESEAALQAMVCLLRPVL 184 L + + + A ++Q L++ + ++ + L+ + Sbjct: 136 LAPFLHGDRTYPTLCIPAIGGSANAVISMMQLLRGQLGDLTDEDVAPIVECIAKLVANQM 195 Query: 185 HQRESVQ------PRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKG 238 + V + +F + I L +A +S +LYR+F G Sbjct: 196 NNGPCVSFALDENSQNAARFLQAAEYISRTYSNPRLNSTEVAKHLNISRTTLYRLFEPMG 255 Query: 239 LVVAQYIRNRRLDFC-ADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGE 295 ++R R+ +R ++ K+ I GFS S F+ FK+ +G++P + Sbjct: 256 G-FVAFLRYIRMKHAMRKLLRTGSEVVKVQQIAESCGFSHASSFTRSFKEHYGVSPRD 312 >UniRef50_Q89J39 Transcriptional regulatory protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89J39_BRAJA Length = 351 Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats. Identities = 62/278 (22%), Positives = 103/278 (37%), Gaps = 9/278 (3%) Query: 31 RYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIM-EQDERQ 89 R G + + L + +S +RT + + D+ Y F + + Q R+ Sbjct: 67 RIIGTHKFLMTETVALGEMFSSSFIGARTKKHINRDDEDHVYLSFNIGATTHIGRQFGRE 126 Query: 90 VQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQ 149 + + G LL + ISL LP + ++ + LD Q Sbjct: 127 IDVQPGQAGLLVLDASTQAIAPNNGHCISLKLPNAIFREWGLSPVDLACRPLDCTGADYQ 186 Query: 150 LSHRLLQESMNNPA-LSETESEAALQAMVCLLRPVLHQRESVQPRR--ERQFQKVVTLID 206 L + + N A L E + A Q ++ L L R+ VQ E ++ + L+ Sbjct: 187 LLTGYARLLIANGAGLDEGGAAEATQHLIKLTGRWLGARDGVQGVDGEEAVYRARLALVR 246 Query: 207 DNIR----EEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCA-DAIRHAA 261 I + + E +A GM R++ M A G +Q + RL + Sbjct: 247 QTISKQAFDPEVSLERVARRLGMPSRTVQHMLAKAGESFSQVVMAARLRRARVHLLDPVY 306 Query: 262 DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRK 299 D +A I FH GF D S F F+ + +TP R + Sbjct: 307 ADLSVADIAFHCGFLDVSSFYRAFRAAYNVTPKSLREQ 344 >UniRef50_B8H192 Transcriptional regulator n=3 Tax=Caulobacter RepID=B8H192_CAUCN Length = 446 Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats. Identities = 73/296 (24%), Positives = 121/296 (40%), Gaps = 14/296 (4%) Query: 14 SQINQVCGN-FTGRLL--TERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAW 70 + Q C F LL + +D + G+ L+ R + + Sbjct: 127 ERYRQACAQLFDVTLLEPDTAFHNRMDGYNLGGVVLARCKGVPQRFDRRYAHIIADTADS 186 Query: 71 FYTVFQLS-GQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQY 129 V +LS G D R G G I L+D SRP + + + ++L +PR L++ Sbjct: 187 VLAVLELSSGGWSGIYDGRPADSGMGAIRLVDMSRPFDMT-TAAFETLNLAIPRATLDEQ 245 Query: 130 FPHQKPICAERLDADLPMVQLSHRLLQESMNN-PALSETESEAALQAMVCLLRPVLHQRE 188 H + + ++ ++ ++ ++ E+ A +A L + Sbjct: 246 VDHID-FHGRVVSENTATGRILGAHMRAVWDSIETITTAEAALAAKAAATLFSAAILAHG 304 Query: 189 SVQPRRERQFQK-----VVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQ 243 V R +K + + + L PE + G+S LYR+F G V+ Sbjct: 305 EVAGADARPIEKMLLASARDFVIGRLADPELSPEAVRQHLGVSRSLLYRVFEPAGG-VSA 363 Query: 244 YIRNRRLDFCADAI-RHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRR 298 +I+ RRLD D I R ++ + LA IG+ GF +HFS VF+ RFG+TPG RR Sbjct: 364 FIQARRLDQAFDEIIRDQSERKTLAEIGYGLGFRSDAHFSRVFRARFGVTPGRLRR 419 >UniRef50_C3JEA3 Transcriptional regulator, AraC family n=2 Tax=Rhodococcus erythropolis RepID=C3JEA3_RHOER Length = 335 Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats. Identities = 69/307 (22%), Positives = 116/307 (37%), Gaps = 12/307 (3%) Query: 1 MNPAVDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTW 60 ++PA ++F W S T G + + T + +R Sbjct: 15 VDPADADDF--WRSATRPFFVTDRIDPDT-SLEGSITALSIGTSLIGQTTFNAQKYTRNN 71 Query: 61 QEVKGSD-DAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPC--SLYWQESSKQI 117 + + S D + L GQ D GD+T D R + + + I Sbjct: 72 RLIAESGLDDEYMVQVVLDGQLSGNADGVDFVARQGDVTFFDLGRTWTADAEAESTGRTI 131 Query: 118 SLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMV 177 +LL PR+L+E + + L +P V L+ + + P L + + Sbjct: 132 TLLAPRSLVEAE-SKGRSLHGTVLRG-VPAVVLAQCMQSVVLALPHLDPDAAAGYEDVVA 189 Query: 178 CLLRPVLHQRES-VQPRRERQFQ-KVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFA 235 LLR L E + PR + + + I +++ E L P + +S LYR FA Sbjct: 190 SLLRVSLGIAEPDLSPRPDHSLRDRAYAYIAEHLSETWLGPTSMCAALSVSRAQLYRAFA 249 Query: 236 DKGLVVAQYIRNRRLDFCADAI-RHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPG 294 G +A IR +RL+ + R +E + + GF+ +S + FK +GMTP Sbjct: 250 SDGG-IALVIRRKRLELVYRELTRTEMPNETIEALALRCGFTSKSQLARAFKDFYGMTPS 308 Query: 295 EYRRKFR 301 + R R Sbjct: 309 QARTDGR 315 >UniRef50_Q13QE0 Transcriptional regulator, AraC family n=1 Tax=Burkholderia xenovorans LB400 RepID=Q13QE0_BURXL Length = 346 Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats. Identities = 59/306 (19%), Positives = 113/306 (36%), Gaps = 13/306 (4%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRL-LTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 A D +F W ++ V + + + G +D + G+ L+ T + L R+ Sbjct: 33 APDEQFLAWRQRVGHVVDAPPSKAQIAGGFRGEIDLYAVGGMVLTDCRTDSMLLERSVAR 92 Query: 63 VKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGD---ITLLDASRPCSLYWQESSKQISL 119 V + + G R+ + G I D ++P E + +SL Sbjct: 93 VSTDSRRDYAFQLFVEGGVGHVTGMRKKRSEPGSVQGIVAFDLNQPFRAERPE-CRLLSL 151 Query: 120 LLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN-PALSETESEAALQAMVC 178 +P ++++ I + P+ + + P L + AL A Sbjct: 152 FVPAAVVDEELRDGAAIHGRIVQQGSPLTGVVLDHMTALAREIPHLDPASAIEALHAGAQ 211 Query: 179 LLRPVLHQRESVQPRRERQFQ-----KVVTLIDDNIREEILRPEWIAGETGMSVRSLYRM 233 L+ + + Q +V I+ N+ + L P + + ++YR Sbjct: 212 LMVSAFRKDARLSGAGRAALQAAVMGRVRRYIEANLHQGDLTPTSVVQALQLKRATIYRW 271 Query: 234 FADKGLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTP 293 F +G + YIR+RRL AD + ++ I F GF S F+ F++ F ++P Sbjct: 272 FEHEGG-LGAYIRHRRLREAADELVR-YPHLQVTEIAFGLGFHSASDFTRAFRRAFDISP 329 Query: 294 GEYRRK 299 + R + Sbjct: 330 QDMRAR 335 >UniRef50_B3Q8F7 Transcriptional regulator, AraC family n=3 Tax=Rhodopseudomonas palustris RepID=B3Q8F7_RHOPT Length = 352 Score = 157 bits (398), Expect = 4e-37, Method: Composition-based stats. Identities = 60/304 (19%), Positives = 110/304 (36%), Gaps = 13/304 (4%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEV 63 + F W + V L + SG SRT + V Sbjct: 22 PARDRFDAWREYLRPVADLAPAADGVGTSAIDLACWDLGSFAMCQERNSGTRFSRTLRRV 81 Query: 64 KGSDDAWFYTVFQLSGQAIMEQDE-----RQVQIGAGDITLLDASRPCSLYWQESSKQIS 118 K +Y +G + D ++++ G ++L + + Sbjct: 82 KTVFADHWYLFLIKAGSNWVVSDGGWSSGQEIRGAPGQLSLYSLGEAFHGEM-NPIEVLM 140 Query: 119 LLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVC 178 L +PR + + +DA + LS +L P L+ E A ++A Sbjct: 141 LFIPRDAFARQAGRLDRLNNTIIDATRGRL-LSDYMLALERQLPNLTHDEVPAIVRATEA 199 Query: 179 LLRPVLHQRE-SVQPRRERQF----QKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRM 233 ++ L S++ R+ ++ ++ + + L P +A G+S +LYR+ Sbjct: 200 MIAACLTPTPHSLEDARDGVILSLGERARKVVQARLYDPRLTPACLAKSIGVSRSALYRL 259 Query: 234 FADKGLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTP 293 F G A+Y+RN RL A+ + ++ I +GF+ FS F+ R+G +P Sbjct: 260 FEPHGGA-ARYVRNTRLAAAHRALCDLTETRQIQQIAGSFGFTSSQEFSRAFRLRYGYSP 318 Query: 294 GEYR 297 E R Sbjct: 319 SELR 322 >UniRef50_D0XVC6 Transcriptional regulator, AraC family n=1 Tax=Caulobacter segnis ATCC 21756 RepID=D0XVC6_9CAUL Length = 347 Score = 157 bits (397), Expect = 5e-37, Method: Composition-based stats. Identities = 72/292 (24%), Positives = 121/292 (41%), Gaps = 13/292 (4%) Query: 18 QVCGNFTGRLLTERYTGV---LDTHFAKGLKL--STVTTSGVNLSRTWQEVKGSDDAWFY 72 + F RL G + + + L + ++ R ++V + Sbjct: 29 AIAPVFDTRLCDVGPEGPDLWISSVNVGPMLLGYAHMSGGTYGYGRDHRKVAATGLDLIL 88 Query: 73 TVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPH 132 G + +V+ GD+ LLD SR Q + SL +PR L Sbjct: 89 VQIIAEGSDRRQAHRSEVETQVGDVCLLDLSRSFQSEAQ-TCGNFSLAIPREALAARDRD 147 Query: 133 QKPICAERLDADLPMVQLSHRLLQESMN-NPALSETESEAALQAMVCLLR----PVLHQR 187 + L D P +L ++ + ALS ++ A ++ + LL P ++ Sbjct: 148 LDDLHGRVLRYDTPAARLLKGHVETIWSMTGALSIHDAPAVGRSTIDLLAGLALPTSDRQ 207 Query: 188 ESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRN 247 ++ + E + ++ ID N+ E L PE ++ + G+S SLYR+F G V ++I+ Sbjct: 208 QARRAVSESRLTQIRRFIDANLHEPGLGPEMLSRQFGLSRASLYRLFEPLGG-VREHIQG 266 Query: 248 RRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRR 298 RRL DA+ + L+ + GFS S F+ FK RFGM+PGE R Sbjct: 267 RRLRRVFDALTDPSLRHLPLSQVAEGHGFSAWSSFARAFKARFGMSPGEARE 318 >UniRef50_Q216W5 Transcriptional regulator, AraC family n=2 Tax=Bradyrhizobiaceae RepID=Q216W5_RHOPB Length = 375 Score = 157 bits (396), Expect = 6e-37, Method: Composition-based stats. Identities = 53/299 (17%), Positives = 104/299 (34%), Gaps = 7/299 (2%) Query: 8 EFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSD 67 F++W + + + + L + RT ++ Sbjct: 61 RFEKWQQLTSSLFVASKKSPMVGSRDLSFRCYNLDRLLFFDHSAGAYGAERTPSQIVTQG 120 Query: 68 DAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLE 127 Q G ++ + + G GD+ +LD S+ E I + LPR E Sbjct: 121 VDHILLGLQTVGTTLLMRSDGVAMAGVGDLVVLDLSQRFQFA-TEGMSAIHICLPRRRFE 179 Query: 128 QYFPHQKPICAERLDA-DLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPVLHQ 186 + + L + P+++L L + E L + + Sbjct: 180 NHARKMGARHMQILRSEGEPLLKLMADHLLNMRTCLHHAVAEQLHLLTSAAIAICNAAFT 239 Query: 187 RESVQPRRERQFQKV--VTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQY 244 E + I++NI+ + L E + G+S LY++F G +V+ Y Sbjct: 240 PPEDSSYNEPAVAAIEVRQFIEENIQHQDLGIELLCARFGLSRTPLYKLFEVDGGIVS-Y 298 Query: 245 IRNRRLDFCADAIR--HAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKFR 301 IR+RRL + ++++ + + G+ FS F +R+G+ P E R ++ Sbjct: 299 IRSRRLARAMLMLSGVEGRSHQRVSSVAYACGYQSAKMFSRAFHRRYGVNPREVNRTYQ 357 >UniRef50_A2SLW3 Transcriptional regulator, AraC family n=22 Tax=Bacteria RepID=A2SLW3_METPP Length = 844 Score = 156 bits (395), Expect = 7e-37, Method: Composition-based stats. Identities = 48/262 (18%), Positives = 92/262 (35%), Gaps = 14/262 (5%) Query: 46 LSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRP 105 + + +S + L G ++ + + V + AG I LLD +RP Sbjct: 58 FARLGSSPQVWLPHPGNARRGGHTVLMLAL-LEGSGLVVEGQESVALAAGGIVLLDPARP 116 Query: 106 CSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN-PAL 164 + + + + L + + + L++ + L Sbjct: 117 WRVELNTDFRAVVIRLESASFVLRLVRTSGQDLNTISPKTGVGAVCLNLVRSIADELDQL 176 Query: 165 SETESEAALQAMVCLLRPVLHQRESVQPRRER-----------QFQKVVTLIDDNIREEI 213 E ++ LL L + + ++V ++ + + Sbjct: 177 GRHELLPIEATLMELLVTCLSHVDDEDAQAAASPDDSTSVQLGHLRRVCRTVEARLGDAE 236 Query: 214 LRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCA-DAIRHAADDEKLAGIGFH 272 L E IA G+S R + ++F +Y++ RRL+ C D A +A + F Sbjct: 237 LTLEAIAALEGLSPRYIQKLFKAASASFGEYLKARRLERCRLDLANRALAHFTIAELCFR 296 Query: 273 WGFSDQSHFSTVFKQRFGMTPG 294 WGF D ++FS F RFG++P Sbjct: 297 WGFGDAANFSRAFTARFGVSPK 318 >UniRef50_Q988I6 Transcriptional regulator n=1 Tax=Mesorhizobium loti RepID=Q988I6_RHILO Length = 375 Score = 156 bits (395), Expect = 8e-37, Method: Composition-based stats. Identities = 58/300 (19%), Positives = 104/300 (34%), Gaps = 10/300 (3%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEV 63 ++F W + + G L L+ V+T+G++ + V Sbjct: 46 PPKDQFAAWRQSFATMLDFVEPGDTEAGFAGTQVIWDLGDLALAQVSTNGLDFTSLAGHV 105 Query: 64 KGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPR 123 + + G++ + AG + + R S+ + L +PR Sbjct: 106 RRDPVDHWLVTLIQDGRSQTITPSKSFDGDAGSVQVHPLGRVFE-GSVTDSEMLLLFVPR 164 Query: 124 TLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN-PALSETESEAALQAMVCLLRP 182 L M L L + P + + L A +L+ Sbjct: 165 DFCRDMSWGLAAAEFSVLRG--GMGPLLADYLASLVQRLPTMGVNDLPGLLSATRAMLQV 222 Query: 183 VL-----HQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADK 237 + H E+ P ++ + ++ + L E + E G+S LYR+F Sbjct: 223 CIAPSPDHLTEAHDPISATLLERARRFVQHHLFQPDLSIEQMTRELGISRSRLYRLFEAS 282 Query: 238 GLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 G +V YI++RRL A+ D ++ I +GF D + FS F++ FG P E R Sbjct: 283 GGIVH-YIQHRRLLAAHAALADPNDRRRILDIADEYGFGDGAEFSRAFRREFGYCPSEVR 341 >UniRef50_A6X415 Helix-turn-helix-domain containing protein AraC type n=1 Tax=Ochrobactrum anthropi ATCC 49188 RepID=A6X415_OCHA4 Length = 339 Score = 156 bits (395), Expect = 9e-37, Method: Composition-based stats. Identities = 45/239 (18%), Positives = 91/239 (38%), Gaps = 7/239 (2%) Query: 65 GSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRT 124 G V + G + Q + + GD+ L + + E + LP + Sbjct: 81 GCSADQLLMVRSMEGPLRIRQSGETLNLLPGDVVFLSPDKAYEWWLPEGGRVDCGRLPVS 140 Query: 125 LLEQYFPHQKPICAERLDADLPMVQLS----HRLLQESMNNPALSETESEAALQAMVCLL 180 K + P ++L LL + P +E + Q + +L Sbjct: 141 YFPVSKQAVKNFLMRPIPKAYPPLKLLITHGAYLLMRGAHAPGEAEMIAAHFRQVLPMVL 200 Query: 181 RPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLV 240 + + + + R R ++ I+ + + + G++ R + ++F + Sbjct: 201 EFL--RDDHRKHRSGRNLSQIKAFIETGLSDATFDLGTVTARFGVTARQVQKLFQAENTT 258 Query: 241 VAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRK 299 ++Y+ RRLD + ++ ++ I + GF D S+F+ VF+Q FGMTP R + Sbjct: 259 FSRYVLERRLDMARLRVSR-QNNRSISSIAYEVGFGDLSYFNRVFRQHFGMTPSAMRDQ 316 >UniRef50_B5GZF8 Transcriptional regulator n=1 Tax=Streptomyces clavuligerus ATCC 27064 RepID=B5GZF8_STRCL Length = 343 Score = 155 bits (393), Expect = 1e-36, Method: Composition-based stats. Identities = 53/277 (19%), Positives = 102/277 (36%), Gaps = 13/277 (4%) Query: 33 TGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFY-TVFQLSGQAIMEQDERQVQ 91 +++ + + SG + RT + V+ Q +G E + Sbjct: 39 RARMESWRIGTVTCFSTHNSGFAVHRTAEHVRRHRSQPVVSVSMQTAGVGRAEAGGERWL 98 Query: 92 IGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLS 151 +G D+ + P W + ++L + P + + A P+ L Sbjct: 99 LGPDDLCVFHELTPRVYGWSGTGASQAVLF--DVDRLGLPVEAVLKASLRLRASPLHDLV 156 Query: 152 HRLLQESMNNPA------LSETESEAALQAMVCLLRPVLHQRESVQPR---RERQFQKVV 202 R L++ +P + + A + + LL +H + R + +V+ Sbjct: 157 LRHLRDLFRDPGPLEEDPGAAALANATTELVRSLLLSAVHDERTPPVRAVMDDTLVTRVM 216 Query: 203 TLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAI-RHAA 261 + + + + L P IA E +S+R LY + G+ + Q+I RL + Sbjct: 217 SAVRTRLTDPALTPARIAAEHAVSLRHLYGVLGRAGIGLEQWIITERLSLARRMLVSDVH 276 Query: 262 DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRR 298 +A + GF SHFS F+ +G+TP E+R Sbjct: 277 RHLPIASVAARCGFLSPSHFSRRFRAAYGVTPREWRN 313 >UniRef50_B1FI04 Transcriptional regulator, AraC family n=1 Tax=Burkholderia ambifaria IOP40-10 RepID=B1FI04_9BURK Length = 341 Score = 155 bits (391), Expect = 2e-36, Method: Composition-based stats. Identities = 59/303 (19%), Positives = 112/303 (36%), Gaps = 20/303 (6%) Query: 18 QVCGNFTGR-----LLTERYT--GVLDTHFAKGLKL----STVTTSGVNLSRTWQEVKGS 66 ++C F G R+ G + +++ + ++ + R + +G Sbjct: 22 RLCEAFDGERLELEASRNRFEPVGKITRRRLSSIEMLRSEAAISNGPFGIRRDSKSGRGG 81 Query: 67 DDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLL 126 D V L+ Q E + GDI L+ P L + + + LP+ Sbjct: 82 QDE-LILVVVLASQLSCEIGNSYYTLAEGDIALIGPEHPSRLEFSAGFDGLWVRLPKIES 140 Query: 127 EQYFPHQKPICAERLDADLP-MVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPVLH 185 + + D+ M L LL + +++ +++ L+ + Sbjct: 141 HIRRVIFQDAVDRKFDSRRGIMHVLLRTLLTTYESANSIAGDSVPWLESSLLDLIAAAVS 200 Query: 186 QRE------SVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGL 239 Q++ + I + ++ L P IA G+SVR L +FA Sbjct: 201 ASSIVAREGHATTYSRATLQRIKSHIVARLHDDTLTPSSIASAMGISVRRLNELFAQCQT 260 Query: 240 VVAQYIRNRRLDFCA-DAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRR 298 V ++I RL+ C + + E + + + GF + SHF+ FK RFG +PG+ R Sbjct: 261 TVTEWIIAERLERCRKRLLLRSQVRETICQVAYEEGFKNISHFNRAFKNRFGESPGQLRD 320 Query: 299 KFR 301 + R Sbjct: 321 RIR 323 >UniRef50_Q2IUH6 Transcriptional regulator, AraC family n=10 Tax=Alphaproteobacteria RepID=Q2IUH6_RHOP2 Length = 352 Score = 154 bits (390), Expect = 3e-36, Method: Composition-based stats. Identities = 69/296 (23%), Positives = 121/296 (40%), Gaps = 12/296 (4%) Query: 8 EFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSD 67 W + I+ + + TG L ++ V + + R + Sbjct: 19 ALATWSAVISPLFEPRPCGPSKKTPTGSAYGIIIGDLIIAKVAFNAQDFVRDEPRIAA-T 77 Query: 68 DAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLE 127 ++G +Q IG G + L+D + P + +S + L++PR LL Sbjct: 78 PDHLLLHLYVTGGFNGVVTRQQTAIGPGKVALIDLAHPIATRAF-ASSTVCLIVPRKLLG 136 Query: 128 QYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPVLHQR 187 + L DL L+ L + L+ET+ + V LR +L Sbjct: 137 GLPLDTLKPRLDPLRNDL----LAAHLRSLQERSAQLTETDVADTVADTVGFLRRLLAPA 192 Query: 188 ESVQPRRERQ-----FQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVA 242 + P E++ + LI DN+ L P+W+A +S SLYR+FAD+G + Sbjct: 193 QDESPAAEQRTDETILALLEALIRDNLASPDLSPDWLAQRLDVSRASLYRLFADRGG-IM 251 Query: 243 QYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRR 298 +Y++ RRL A+ + +L+ + GF ++HFS F+ RFG+T +R+ Sbjct: 252 RYVQERRLLAVQAALSDPIETRRLSRLASDLGFKSEAHFSRSFRARFGVTASAFRK 307 >UniRef50_A8LBJ6 Transcriptional regulator, AraC family n=1 Tax=Frankia sp. EAN1pec RepID=A8LBJ6_FRASN Length = 354 Score = 153 bits (388), Expect = 5e-36, Method: Composition-based stats. Identities = 64/284 (22%), Positives = 105/284 (36%), Gaps = 12/284 (4%) Query: 27 LLTERYTGVLDTHFAKGLKLSTVTTSG-VNLSRTWQEVKGSDDAWFYTVFQLS-GQAIME 84 G +++ + L T + ++ RT + V+ + Q G+A+ E Sbjct: 35 HAQHDIRGRIESWIFGEVGLIRTTVNAGQHMIRTARHVRQDSAPPVLSFAQRRHGRAVQE 94 Query: 85 QDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDAD 144 Q + ++ AG++ D S E L +P L P + A Sbjct: 95 QFGVRRELAAGELYCTDLSSAFEYANAEGGCGQGLQVP--LASLGLPGEVVRRGAPNLAR 152 Query: 145 LPMVQLSHRLLQESMNNPALSETESEAALQAMVC-------LLRPVLHQRESVQPRRERQ 197 P+ L L + A E + AA L+ E E Sbjct: 153 SPLYPLVTDHLTALARDAAALERDESAAGVGTATVELVRALLVSAARGPDEPPGTPAEIM 212 Query: 198 FQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAI 257 +V + ++ + L + IA G+SVR LYR+ + + Q+I RL+ A+ Sbjct: 213 LARVRHHVLAHLADSDLNADGIAAAVGVSVRHLYRLCREAEFSLEQWIVRNRLERARGAL 272 Query: 258 -RHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKF 300 A +A I GF+D SHFS F+ +G TP E+RR Sbjct: 273 AARDARGRSIAAIARANGFADPSHFSRRFRAAYGTTPQEWRRHH 316 >UniRef50_B1M0B6 Transcriptional regulator, AraC family n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1M0B6_METRJ Length = 311 Score = 153 bits (386), Expect = 9e-36, Method: Composition-based stats. Identities = 54/297 (18%), Positives = 116/297 (39%), Gaps = 13/297 (4%) Query: 6 DNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKG 65 + F W + +TG ++T + L + + +R+ +++ Sbjct: 17 RDRFAAWR----ALFSAHDLDADPHGFTGRIETTLIGPMALRVMNAAPQGPARSRSQIRR 72 Query: 66 SDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTL 125 F + +E + V++ AG ++L D S+P + + L + R Sbjct: 73 DGQDGFVLHLSRHAYS-VETERGVVEVPAGAVSLNDLSQPYRRSRVPETDSLILAVSRAA 131 Query: 126 LEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPVLH 185 + P + + L + L+ + + ++ A++ T++ QA + ++ Sbjct: 132 IATVLPDEDAMHGLILSGGAGHL-LADHIRSLAAHSDAITATDAAHIAQATLHMVAACAR 190 Query: 186 Q-----RESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLV 240 + P + + LI + R + +A G+S LYR+F +G Sbjct: 191 PSLDGAARAAAPLEAARLRTAKRLIRGQLAAPP-RIDALARALGISRSQLYRLFEPEGG- 248 Query: 241 VAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 VA+Y +RL A+ + + + IG +GF + S F++ +G+TP +YR Sbjct: 249 VARYRARQRLAAVRAALDNPLEPRSIGEIGEVYGFGSSAQLSRAFREAYGLTPRDYR 305 >UniRef50_Q6W2D2 Transcriptional regulator n=11 Tax=Rhizobiales RepID=Q6W2D2_RHISN Length = 385 Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats. Identities = 55/301 (18%), Positives = 98/301 (32%), Gaps = 11/301 (3%) Query: 5 VDNEFQQWLSQINQVCGNF--TGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 +FQ W + + + E + L + +G + R Sbjct: 58 PAEQFQAWRTHMAPLAEVRLPDNLPPEEGFVAEQTAWHCGNLLIVQQRVAGHSYLRPQTM 117 Query: 63 VKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLP 122 ++ S + SG E D R + G + P ++ + L +P Sbjct: 118 LRASPIDHWCVELLHSGTTWTEADRRVTENAPGRLVFRSLGYPFR-GRTTAADGVLLFMP 176 Query: 123 RTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQES-MNNPALSETESEAAL----QAMV 177 L L + + L ++ L+ E + +V Sbjct: 177 YELFADDAAVLGEANNLVLSGN--LADLLITFIEGIEPRLDRLTAEEIPRIVHTVHDMVV 234 Query: 178 CLLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADK 237 + + + ++ I N+ L P+ IA G+S LY++F Sbjct: 235 ACVASSARPDAAGAQTNKGMMERAHRHIHLNLHSAELTPDAIARAIGISRTRLYQLFEAS 294 Query: 238 GLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 G V YIR RRL A+ +D +A I GF ++F+ F FG++P E R Sbjct: 295 GG-VLNYIRRRRLQQAHAALSDPSDGRPIAEIAEAAGFDVAANFTRAFSHEFGVSPREIR 353 Query: 298 R 298 + Sbjct: 354 K 354 >UniRef50_C9YUP3 Putative DNA-binding regulatory protein n=1 Tax=Streptomyces scabiei 87.22 RepID=C9YUP3_STRSW Length = 326 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 56/302 (18%), Positives = 111/302 (36%), Gaps = 6/302 (1%) Query: 5 VDNEFQQWLSQINQVCGNFT-GRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEV 63 W +I G ++ + G +L + + +RT ++V Sbjct: 18 PRERADFWTERIGSYQSRMGFGYARSDDFRGETVRQRTDTYQLVKYRSDEIEYTRTMRQV 77 Query: 64 KGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPR 123 D + + +SG+ ++ QD + ++ G L+ + P ++ L +P Sbjct: 78 HRDPDEDYRLLLPMSGEIVLRQDGGEARLTPGTAALVTFAAPFQCLQSDAIDAFVLTIPA 137 Query: 124 TLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESM-NNPALSETESEAALQAMVCLL-- 180 ++ + P+ A LD + ++ +L LS+ E A +V L+ Sbjct: 138 REVDGRLGTRSPV-ASGLDLTTGLGRIVGSMLTGLHEEREHLSDAEFNAVSDRVVELVCM 196 Query: 181 RPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLV 240 R + V + D++ + L +A G S+R + G Sbjct: 197 LTAGDDRPDAPGQLGEVEALVRRYVRDHVADPNLTGTAVARALGWSLRQIQLALQQAGTT 256 Query: 241 VAQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRK 299 + IR RL D + A + + + + GFS S ST F++R+ ++P E R+ Sbjct: 257 PRELIREERLRLVRDRLLCAECEHMTITDLAYAAGFSSASALSTAFRRRYDVSPREMRQS 316 Query: 300 FR 301 R Sbjct: 317 AR 318 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q47129 Transcriptional activator feaR n=22 Tax=Enteroba... 297 3e-79 UniRef50_C4X7N3 2-phenylethylamine catabolism regulatory protein... 262 1e-68 UniRef50_C5CKL4 Transcriptional regulator, AraC family n=1 Tax=V... 260 3e-68 UniRef50_A5V4Y7 Transcriptional regulator, AraC family n=1 Tax=S... 256 6e-67 UniRef50_B4E7T1 AraC family regulatory protein n=1 Tax=Burkholde... 255 2e-66 UniRef50_B1KM98 Transcriptional regulator, AraC family n=2 Tax=G... 252 1e-65 UniRef50_B8H6K6 Transcriptional regulator, AraC family n=2 Tax=A... 252 1e-65 UniRef50_B0KNJ7 Transcriptional regulator, AraC family n=1 Tax=P... 251 2e-65 UniRef50_A0K0Q9 Transcriptional regulator, AraC family n=2 Tax=A... 251 2e-65 UniRef50_Q0SCS8 Transcriptional regulator, AraC family protein n... 251 3e-65 UniRef50_Q5YXZ9 Putative transcriptional regulator n=1 Tax=Nocar... 250 4e-65 UniRef50_Q0RX84 Transcriptional regulator, AraC family protein n... 247 3e-64 UniRef50_Q500U0 Helix-turn-helix, AraC type n=2 Tax=Pseudomonas ... 246 6e-64 UniRef50_A8GAE8 Transcriptional regulator, AraC family n=1 Tax=S... 245 1e-63 UniRef50_UPI0001873BA5 Helix-turn-helix, AraC type n=1 Tax=Pseud... 243 4e-63 UniRef50_B1Z4N2 Transcriptional regulator, AraC family n=6 Tax=B... 241 2e-62 UniRef50_A2SEG7 Transcriptional regulator, AraC family n=1 Tax=M... 240 4e-62 UniRef50_Q0S4H2 Probable transcriptional regulator, AraC family ... 239 1e-61 UniRef50_A2SM26 Transcriptional regulator, AraC family n=1 Tax=M... 238 1e-61 UniRef50_C0GAC0 AraC-family transcriptional regulator n=4 Tax=Br... 238 1e-61 UniRef50_P72312 Nitrilase regulator n=1 Tax=Rhodococcus rhodochr... 237 3e-61 UniRef50_B1G4X3 Transcriptional regulator, AraC family n=1 Tax=B... 236 6e-61 UniRef50_Q5YW11 Putative transcriptional regulator n=1 Tax=Nocar... 234 2e-60 UniRef50_B8GZF8 Transcriptional regulator, AraC family n=2 Tax=C... 232 1e-59 UniRef50_Q28KV9 Transcriptional regulator, AraC family n=1 Tax=J... 231 2e-59 UniRef50_B2HDE9 Transcriptional regulatory protein n=1 Tax=Mycob... 231 2e-59 UniRef50_B9K0H9 AraC-type DNA-binding domain-containing protein ... 231 3e-59 UniRef50_A1R5Y4 Transcriptional regulator, AraC family n=1 Tax=A... 231 3e-59 UniRef50_Q89GD7 Transcriptional regulatory protein n=1 Tax=Brady... 230 3e-59 UniRef50_B9K5S9 AraC-type DNA-binding domain-containing protein ... 230 4e-59 UniRef50_B5S3I4 Probable transcription regulator sugar transport... 230 5e-59 UniRef50_A1VU02 Transcriptional regulator, AraC family n=4 Tax=C... 230 6e-59 UniRef50_C1AVG9 Putative AraC family transcriptional regulator n... 229 8e-59 UniRef50_Q13VV6 Transcriptional regulator, AraC family n=2 Tax=P... 228 1e-58 UniRef50_B0RKH8 AraC family transcription regulator protein n=1 ... 228 1e-58 UniRef50_A5EKU9 Transcriptional regulator, AraC family n=2 Tax=B... 228 2e-58 UniRef50_Q4ZUB6 Helix-turn-helix, AraC type n=1 Tax=Pseudomonas ... 226 7e-58 UniRef50_C5ALA2 Transcriptional regulator, AraC family protein n... 225 1e-57 UniRef50_D0XME9 Transcriptional regulator, AraC family n=1 Tax=B... 225 2e-57 UniRef50_C4KLX3 AraC family regulatory protein n=30 Tax=pseudoma... 224 3e-57 UniRef50_Q603U3 Transcriptional regulator, AraC family n=1 Tax=M... 223 6e-57 UniRef50_C3PKW7 Transcription regulator, AraC family n=2 Tax=Cor... 222 9e-57 UniRef50_B8ETQ3 Transcriptional regulator, AraC family n=1 Tax=M... 222 1e-56 UniRef50_C8Q8U1 Transcriptional regulator, AraC family n=1 Tax=P... 221 2e-56 UniRef50_C8Q6A0 Transcriptional regulator, AraC family n=1 Tax=P... 221 3e-56 UniRef50_C6QDE9 Transcriptional regulator, AraC family n=1 Tax=H... 220 4e-56 UniRef50_C0ATQ8 Putative uncharacterized protein n=1 Tax=Proteus... 220 4e-56 UniRef50_C5CWJ0 Transcriptional regulator, AraC family n=1 Tax=V... 220 5e-56 UniRef50_UPI0001B4CF93 AraC family transcription regulator n=1 T... 220 6e-56 UniRef50_Q140Z5 Transcriptional regulator, AraC family n=2 Tax=B... 219 9e-56 UniRef50_B2JSH9 Transcriptional regulator, AraC family n=1 Tax=B... 219 1e-55 UniRef50_A9D6L8 Helix-turn-helix, AraC type n=1 Tax=Hoeflea phot... 218 2e-55 UniRef50_A5EP12 Transcriptional regulator, AraC family n=3 Tax=B... 218 2e-55 UniRef50_A5W3Z7 Transcriptional regulator, AraC family n=5 Tax=P... 218 3e-55 UniRef50_B5GMZ9 AraC-family transcriptional regulator n=1 Tax=St... 217 3e-55 UniRef50_C6Q9S8 Transcriptional regulator, AraC family n=1 Tax=H... 217 5e-55 UniRef50_B2IIE7 Transcriptional regulator, AraC family n=1 Tax=B... 217 5e-55 UniRef50_B6R2R9 Transcriptional regulator, AraC family n=1 Tax=P... 216 1e-54 UniRef50_B2IIZ5 Transcriptional regulator, AraC family n=1 Tax=B... 215 1e-54 UniRef50_C8QGB6 Transcriptional regulator, AraC family n=2 Tax=E... 215 1e-54 UniRef50_UPI000050F7EC transcriptional regulator, AraC family pr... 215 1e-54 UniRef50_D2AT05 AraC family transcriptional regulator n=1 Tax=St... 215 1e-54 UniRef50_D0LBD5 Helix-turn-helix-domain containing protein AraC ... 215 1e-54 UniRef50_Q2KTV5 AraC-family transcriptional regulator n=1 Tax=Bo... 215 2e-54 UniRef50_A5VPA4 Transcriptional regulator, AraC family n=41 Tax=... 215 2e-54 UniRef50_B8HJE0 Transcriptional regulator, AraC family n=1 Tax=A... 215 2e-54 UniRef50_Q1H4B9 Transcriptional regulator, AraC family n=1 Tax=M... 215 2e-54 UniRef50_B9JQ03 AraC-type DNA-binding domain-containing protein ... 214 2e-54 UniRef50_D0LBE5 Helix-turn-helix-domain containing protein AraC ... 214 4e-54 UniRef50_A6W2J9 Helix-turn-helix-domain containing protein AraC ... 214 4e-54 UniRef50_D1S730 Transcriptional regulator, AraC family (Fragment... 213 5e-54 UniRef50_C5D1Y8 Transcriptional regulator, AraC family n=1 Tax=V... 213 5e-54 UniRef50_B1LSU0 Transcriptional regulator, AraC family n=1 Tax=M... 213 6e-54 UniRef50_C6X6W8 Transcriptional regulator, AraC family n=1 Tax=M... 213 6e-54 UniRef50_Q9S2C6 Putative regulatory protein n=3 Tax=Streptomyces... 212 1e-53 UniRef50_Q0SJU4 Transcriptional regulator, AraC family protein n... 212 1e-53 UniRef50_UPI0001AF1428 AraC family transcription regulator n=1 T... 212 1e-53 UniRef50_A2SJ73 Transcriptional regulator, AraC family n=1 Tax=M... 212 1e-53 UniRef50_B1Q2A8 Transcriptional activator for nphA1A2 n=4 Tax=No... 211 2e-53 UniRef50_C9NAR3 Transcriptional regulator, AraC family n=3 Tax=S... 211 2e-53 UniRef50_A0NZA7 Probable transcriptional regulator n=1 Tax=Labre... 211 2e-53 UniRef50_D2B571 AraC-type DNA-binding domain-containing protein-... 211 2e-53 UniRef50_B4UYA5 AraC family regulatory protein n=1 Tax=Streptomy... 211 2e-53 UniRef50_A2SKZ3 Transcriptional regulator, AraC family n=1 Tax=M... 211 2e-53 UniRef50_A4Q9T5 Putative uncharacterized protein n=1 Tax=Coryneb... 211 3e-53 UniRef50_Q162N1 Transcriptional regulator, AraC family, putative... 211 3e-53 UniRef50_A1WI21 Transcriptional regulator, AraC family n=1 Tax=V... 210 4e-53 UniRef50_C3JZK1 AraC family regulatory protein n=1 Tax=Pseudomon... 209 8e-53 UniRef50_B5HV97 AraC-family transcriptional regulator n=2 Tax=St... 209 9e-53 UniRef50_Q2G766 Transcriptional regulator, AraC family n=1 Tax=N... 209 1e-52 UniRef50_Q38ZW3 Transcriptional regulator, AraC family n=2 Tax=B... 209 1e-52 UniRef50_B1LTK5 Transcriptional regulator, AraC family n=2 Tax=M... 208 1e-52 UniRef50_B0SW51 Transcriptional regulator, AraC family n=1 Tax=C... 208 1e-52 UniRef50_Q0S9V9 Transcriptional regulator, AraC family protein n... 208 2e-52 UniRef50_A1RDF3 Transcriptional regulator, AraC family n=1 Tax=A... 208 2e-52 UniRef50_B2UHP4 Transcriptional regulator, AraC family n=2 Tax=R... 208 2e-52 UniRef50_UPI0001B588BC AraC family transcriptional regulator n=2... 208 2e-52 UniRef50_Q5YUM1 Putative transcriptional regulator n=1 Tax=Nocar... 208 2e-52 UniRef50_Q82RS6 Putative regulatory protein n=1 Tax=Streptomyces... 207 3e-52 UniRef50_Q7CU51 Transcriptional regulator, AraC family n=1 Tax=A... 207 4e-52 UniRef50_B0T8Y9 Transcriptional regulator, AraC family n=1 Tax=C... 207 4e-52 UniRef50_D0J2C8 Transcriptional regulator, AraC family n=2 Tax=C... 207 5e-52 UniRef50_Q82PX9 Putative AraC-family transcriptional regulator n... 206 7e-52 UniRef50_B8IWN2 Transcriptional regulator, AraC family n=1 Tax=M... 206 8e-52 UniRef50_A9D8L4 Transcriptional regulator, AraC family protein n... 206 9e-52 UniRef50_A8ICM9 Putative transcriptional regulator n=1 Tax=Azorh... 205 1e-51 UniRef50_C0N2M9 Transcriptional regulator, AraC family protein n... 205 1e-51 UniRef50_A1BAD0 Transcriptional regulator, AraC family n=1 Tax=P... 205 1e-51 UniRef50_C8NQI1 AraC-type transcriptional regulator n=4 Tax=Cory... 205 1e-51 UniRef50_Q0S048 Probable transcriptional regulator n=1 Tax=Rhodo... 205 2e-51 UniRef50_B2GIQ7 Putative AraC family transcriptional regulator n... 204 2e-51 UniRef50_Q0SCE6 Transcriptional regulator, AraC family protein n... 204 2e-51 UniRef50_B0V5B3 DNA-binding transcriptional dual regulator n=9 T... 203 4e-51 UniRef50_B0KKU7 Transcriptional regulator, AraC family n=10 Tax=... 203 5e-51 UniRef50_UPI0001B554AB AraC family transcription regulator n=1 T... 203 8e-51 UniRef50_A9BNP3 Transcriptional regulator, AraC family n=3 Tax=C... 202 1e-50 UniRef50_C5AL79 Putative uncharacterized protein n=1 Tax=Burkhol... 201 2e-50 UniRef50_B5GLL9 AraC family regulatory protein n=2 Tax=Streptomy... 201 2e-50 UniRef50_B1GXZ7 Transcriptional regulator AraC family n=4 Tax=Rh... 201 2e-50 UniRef50_C3VA09 Putative transcriptional regulator n=1 Tax=Pseud... 201 2e-50 UniRef50_A5EQH2 Transcriptional regulator, AraC family n=3 Tax=B... 201 2e-50 UniRef50_A5EI80 Transcriptional regulator, AraC family n=2 Tax=B... 201 3e-50 UniRef50_A9E8K4 TRANSCRIPTIONAL REGULATOR, ARAC FAMILY n=1 Tax=O... 200 4e-50 UniRef50_B9JMB3 Transcriptional regulator protein n=1 Tax=Agroba... 200 5e-50 UniRef50_Q2IYF7 Transcriptional regulator, AraC family n=1 Tax=R... 200 6e-50 UniRef50_B7WVN7 Transcriptional regulator, AraC family n=1 Tax=C... 200 6e-50 UniRef50_A6X8D5 Helix-turn-helix-domain containing protein AraC ... 199 6e-50 UniRef50_A3KKG5 Putative transcriptional regulator n=1 Tax=Strep... 199 7e-50 UniRef50_C3KC85 Putative AraC family regulatory protein n=1 Tax=... 199 8e-50 UniRef50_D0IZV7 Transcriptional regulator, AraC family n=1 Tax=C... 199 8e-50 UniRef50_C4WP68 Helix-turn-helix domain-containing protein n=2 T... 199 9e-50 UniRef50_B4EG24 AraC family regulatory protein n=12 Tax=Burkhold... 199 9e-50 UniRef50_C5CTZ5 Transcriptional regulator, AraC family n=1 Tax=V... 199 1e-49 UniRef50_UPI0001B58708 AraC family transcription regulator n=1 T... 199 1e-49 UniRef50_Q28K70 Transcriptional regulator, AraC family n=1 Tax=J... 198 2e-49 UniRef50_B5GUE4 AraC family regulatory protein n=1 Tax=Streptomy... 198 2e-49 UniRef50_Q4KBB6 Transcriptional regulator, AraC family n=9 Tax=P... 198 2e-49 UniRef50_UPI0001B557E7 AraC family transcription regulator n=1 T... 198 3e-49 UniRef50_A3XDY1 Transcriptional regulator, AraC family protein n... 198 3e-49 UniRef50_C0RK84 Helix-turn-helix-domain containing protein AraC ... 197 5e-49 UniRef50_A1VJU8 Transcriptional regulator, AraC family n=1 Tax=P... 196 5e-49 UniRef50_A1TIH4 Transcriptional regulator, AraC family n=2 Tax=A... 196 9e-49 UniRef50_C9Z7X5 Putative regulatory protein n=1 Tax=Streptomyces... 196 1e-48 UniRef50_A5EN17 Transcriptional regulator, AraC family n=2 Tax=B... 195 1e-48 UniRef50_B1M073 Transcriptional regulator, AraC family n=3 Tax=M... 195 2e-48 UniRef50_C8SUL6 Transcriptional regulator, AraC family n=1 Tax=M... 194 3e-48 UniRef50_Q1QJK3 Transcriptional regulator, AraC family n=1 Tax=N... 194 4e-48 UniRef50_A1K9Y0 Putative AraC-like transcriptional regulator n=1... 193 5e-48 UniRef50_C9Z339 Putative AraC family regulatory protein n=2 Tax=... 193 6e-48 UniRef50_Q0K404 Formamidase fused to an AraC-type HTH DNA-bindin... 193 7e-48 UniRef50_D1XQJ8 Transcriptional regulator, AraC family n=2 Tax=S... 193 7e-48 UniRef50_A3VDL3 Helix-turn-helix, AraC type n=1 Tax=Rhodobactera... 193 8e-48 UniRef50_Q0B5M9 Transcriptional regulator, AraC family n=4 Tax=B... 193 8e-48 UniRef50_B9JNE0 Transcriptional regulator protein n=1 Tax=Agroba... 192 1e-47 UniRef50_A9C153 Transcriptional regulator, AraC family n=1 Tax=D... 192 1e-47 UniRef50_B9BG93 Transcriptional activator FeaR n=1 Tax=Burkholde... 192 1e-47 UniRef50_B4UXL2 AraC-family transcriptional regulator n=1 Tax=St... 192 2e-47 UniRef50_C5SNU8 Transcriptional regulator, AraC family n=1 Tax=A... 192 2e-47 UniRef50_A0JW90 Transcriptional regulator, AraC family n=1 Tax=A... 191 2e-47 UniRef50_Q92PG5 Transcription regulator AraC family n=1 Tax=Sino... 191 2e-47 UniRef50_B1M2F8 Transcriptional regulator, AraC family n=2 Tax=M... 191 3e-47 UniRef50_C8STG1 Transcriptional regulator, AraC family n=1 Tax=M... 191 3e-47 UniRef50_Q4KD45 Transcriptional regulator, AraC family n=4 Tax=P... 191 3e-47 UniRef50_A5EU33 Transcriptional regulator, AraC family n=1 Tax=B... 190 4e-47 UniRef50_UPI0001B4D7D7 AraC family transcriptional regulator n=1... 190 4e-47 UniRef50_Q8VUZ3 Cad gene transcriptional regulator n=2 Tax=Alpha... 190 5e-47 UniRef50_C9PGF5 Transcriptional regulator AraC family n=1 Tax=Vi... 189 7e-47 UniRef50_C9NEM0 Transcriptional regulator, AraC family n=1 Tax=S... 189 7e-47 UniRef50_A8L0T7 Transcriptional regulator, AraC family n=3 Tax=A... 189 8e-47 UniRef50_C6QB43 Transcriptional regulator, AraC family n=1 Tax=H... 189 1e-46 UniRef50_A6W014 Helix-turn-helix-domain containing protein AraC ... 189 1e-46 UniRef50_C7Q9A2 Transcriptional regulator, AraC family n=1 Tax=C... 189 1e-46 UniRef50_C3JNQ1 Putative transcriptional regulator n=1 Tax=Rhodo... 188 2e-46 UniRef50_UPI0001B551BF AraC family transcriptional regulator n=1... 188 2e-46 UniRef50_B9NWW0 Putative transcriptional regulator n=1 Tax=Rhodo... 188 2e-46 UniRef50_Q0S130 Transcriptional regulator n=1 Tax=Rhodococcus jo... 188 2e-46 UniRef50_Q38ZV0 Transcriptional regulator, AraC family n=3 Tax=B... 188 2e-46 UniRef50_B6A2N3 Transcriptional regulator, AraC family n=1 Tax=R... 188 3e-46 UniRef50_B5WCL9 Transcriptional regulator, AraC family n=1 Tax=B... 188 3e-46 UniRef50_D0XXU2 Transcriptional regulator, AraC family n=1 Tax=C... 187 3e-46 UniRef50_B8HJB6 Transcriptional regulator, AraC family n=1 Tax=A... 187 3e-46 UniRef50_C3JMU3 Transcriptional regulator, AraC family n=2 Tax=R... 187 4e-46 UniRef50_UPI0001909644 transcriptional regulator, AraC family pr... 187 4e-46 UniRef50_D1TAE4 AraC family transcriptional regulator n=1 Tax=Bu... 187 4e-46 UniRef50_Q0RZY7 Transcriptional regulator, AraC family protein n... 187 4e-46 UniRef50_Q0FYH5 Transcriptional regulator, AraC family protein n... 186 6e-46 UniRef50_B0T4I1 Transcriptional regulator, AraC family n=1 Tax=C... 186 8e-46 UniRef50_B1JB60 Transcriptional regulator, AraC family n=1 Tax=P... 186 9e-46 UniRef50_B1M4E1 Transcriptional regulator, AraC family n=1 Tax=M... 186 1e-45 UniRef50_C6XP47 Transcriptional regulator, AraC family n=1 Tax=H... 186 1e-45 UniRef50_D1WYT1 Transcriptional regulator, AraC family n=2 Tax=S... 186 1e-45 UniRef50_C4WLC6 Helix-turn-helix domain-containing protein n=1 T... 185 1e-45 UniRef50_B3Q8F7 Transcriptional regulator, AraC family n=3 Tax=R... 185 2e-45 UniRef50_C8X8B4 Transcriptional regulator, AraC family n=1 Tax=N... 185 2e-45 UniRef50_Q988I6 Transcriptional regulator n=1 Tax=Mesorhizobium ... 185 2e-45 UniRef50_UPI0001907082 AraC family transcriptional regulator n=2... 184 3e-45 UniRef50_C9Z9W8 Putative DNA-binding protein n=1 Tax=Streptomyce... 184 3e-45 UniRef50_B1ZAE8 Transcriptional regulator, AraC family n=1 Tax=M... 184 4e-45 UniRef50_Q602N6 Transcriptional regulator, AraC family n=1 Tax=M... 184 4e-45 UniRef50_Q1N9N6 Transcriptional regulator, AraC family protein n... 183 6e-45 UniRef50_C6WAU0 Transcriptional regulator, AraC family n=1 Tax=A... 182 1e-44 UniRef50_B1T3D6 Transcriptional regulator, AraC family n=1 Tax=B... 182 2e-44 UniRef50_Q89RN6 Transcriptional regulatory protein n=1 Tax=Brady... 181 2e-44 UniRef50_Q1YEQ1 Putative transcriptional regulator n=1 Tax=Auran... 181 2e-44 UniRef50_B7KY13 Transcriptional regulator, AraC family n=4 Tax=M... 181 2e-44 UniRef50_B1FSR0 Transcriptional regulator, AraC family n=1 Tax=B... 181 3e-44 UniRef50_Q89NH4 Transcriptional regulatory protein n=1 Tax=Brady... 181 3e-44 UniRef50_A5VEH1 Transcriptional regulator, AraC family n=1 Tax=S... 181 4e-44 UniRef50_B2SBA0 Helix-turn-helix, AraC type n=40 Tax=Rhizobiales... 181 4e-44 UniRef50_A6X7A5 Helix-turn-helix-domain containing protein AraC ... 180 4e-44 UniRef50_UPI00016A440E helix-turn-helix- domain containing prote... 180 4e-44 UniRef50_UPI0001B58744 AraC family transcription regulator n=1 T... 180 5e-44 UniRef50_C9YUR8 Putative transcriptional regulator n=1 Tax=Strep... 180 5e-44 UniRef50_D2UCS7 Hypothetical hth arac/xyls-type dna-binding doma... 180 6e-44 UniRef50_A5V7R9 Transcriptional regulator, AraC family n=2 Tax=S... 180 6e-44 UniRef50_C3JDH7 Transcriptional regulator, AraC family n=1 Tax=R... 179 9e-44 UniRef50_Q216W5 Transcriptional regulator, AraC family n=2 Tax=B... 179 9e-44 UniRef50_Q6W2D2 Transcriptional regulator n=11 Tax=Rhizobiales R... 179 1e-43 UniRef50_Q89T46 Transcriptional regulatory protein n=1 Tax=Brady... 179 1e-43 UniRef50_Q38ZZ8 Transcriptional regulator, AraC family n=1 Tax=B... 179 1e-43 UniRef50_A0KD53 Transcriptional regulator, AraC family n=9 Tax=B... 179 1e-43 UniRef50_B2SCD0 Helix-turn-helix, AraC type n=39 Tax=Rhizobiales... 178 2e-43 UniRef50_C4WP97 Helix-turn-helix domain-containing protein n=1 T... 178 2e-43 UniRef50_B6YY47 Transcriptional regulator, AraC family n=1 Tax=P... 178 3e-43 UniRef50_C7MQT8 DNA-binding domain-containing protein, AraC-type... 177 4e-43 UniRef50_C6XP49 Transcriptional regulator, AraC family with acet... 177 4e-43 UniRef50_D0KWJ8 Transcriptional regulator, AraC family n=1 Tax=H... 177 5e-43 UniRef50_Q13QE0 Transcriptional regulator, AraC family n=1 Tax=B... 177 5e-43 UniRef50_B6YYX2 Transcriptional regulator, AraC family n=1 Tax=P... 176 7e-43 UniRef50_A5HV12 Probable transcriptional regulator n=1 Tax=Pseud... 176 1e-42 UniRef50_B1FI04 Transcriptional regulator, AraC family n=1 Tax=B... 175 2e-42 UniRef50_A8SBA6 Putative uncharacterized protein n=1 Tax=Faecali... 175 2e-42 UniRef50_A4U4I6 Transcriptional regulator, AraC family n=1 Tax=M... 174 3e-42 UniRef50_B1LSW4 Transcriptional regulator, AraC family n=2 Tax=A... 174 4e-42 UniRef50_B2WW34 Transcriptional regulator n=1 Tax=Streptomyces a... 174 4e-42 UniRef50_Q2ITV5 Transcriptional regulator, AraC family n=1 Tax=R... 174 4e-42 UniRef50_D0XVC6 Transcriptional regulator, AraC family n=1 Tax=C... 173 6e-42 UniRef50_B8H192 Transcriptional regulator n=3 Tax=Caulobacter Re... 172 1e-41 UniRef50_A2SLW3 Transcriptional regulator, AraC family n=22 Tax=... 171 2e-41 UniRef50_B5GZF8 Transcriptional regulator n=1 Tax=Streptomyces c... 171 3e-41 UniRef50_C9YUP3 Putative DNA-binding regulatory protein n=1 Tax=... 171 3e-41 UniRef50_C3JEA3 Transcriptional regulator, AraC family n=2 Tax=R... 170 5e-41 UniRef50_C7HYF2 Transcriptional regulator, AraC family n=1 Tax=T... 169 7e-41 UniRef50_A4Z0B3 Putative Transcriptional regulator, AraC/XylS fa... 169 8e-41 UniRef50_Q1LF91 Transcriptional regulator, AraC family n=1 Tax=C... 169 8e-41 UniRef50_C8X7M3 Transcriptional regulator, AraC family n=1 Tax=N... 169 1e-40 UniRef50_Q3KZ34 Putative regulator AraC-type n=1 Tax=Pimelobacte... 169 1e-40 UniRef50_Q0S609 Possible transcriptional regulator, AraC family ... 169 1e-40 UniRef50_A5EGC6 Transcriptional regulator, AraC family n=1 Tax=B... 169 1e-40 UniRef50_Q89J39 Transcriptional regulatory protein n=1 Tax=Brady... 169 2e-40 Sequences not found previously or not previously below threshold: >UniRef50_Q47129 Transcriptional activator feaR n=22 Tax=Enterobacteriaceae RepID=FEAR_ECOLI Length = 301 Score = 297 bits (761), Expect = 3e-79, Method: Composition-based stats. Identities = 301/301 (100%), Positives = 301/301 (100%) Query: 1 MNPAVDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTW 60 MNPAVDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTW Sbjct: 1 MNPAVDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTW 60 Query: 61 QEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLL 120 QEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLL Sbjct: 61 QEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLL 120 Query: 121 LPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLL 180 LPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLL Sbjct: 121 LPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLL 180 Query: 181 RPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLV 240 RPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLV Sbjct: 181 RPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLV 240 Query: 241 VAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKF 300 VAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKF Sbjct: 241 VAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKF 300 Query: 301 R 301 R Sbjct: 301 R 301 >UniRef50_C4X7N3 2-phenylethylamine catabolism regulatory protein n=9 Tax=Enterobacteriaceae RepID=C4X7N3_KLEPN Length = 320 Score = 262 bits (670), Expect = 1e-68, Method: Composition-based stats. Identities = 186/294 (63%), Positives = 231/294 (78%), Gaps = 3/294 (1%) Query: 8 EFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSD 67 +Q+WL+ INQVCG+F R L E + G +D +A LK+STVT +GVNL RT E+K + Sbjct: 30 AYQRWLATINQVCGHFAARPLKESFHGEIDARYAGSLKVSTVTAAGVNLYRTRNEIKRDN 89 Query: 68 DAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLE 127 DAWFYTVFQL+G+AI+EQD+RQV + AGDITL+DA+RPCS+ WQ++S+Q SLLLPR + Sbjct: 90 DAWFYTVFQLAGEAIIEQDDRQVTLAAGDITLIDAARPCSIVWQQTSRQASLLLPR---Q 146 Query: 128 QYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPVLHQR 187 + P A RLD LPMVQLS RLL ESM LS +ESEAAL+A+ CLLRPVLHQR Sbjct: 147 RVAPTGDITTACRLDKSLPMVQLSQRLLLESMGGTTLSASESEAALEAIACLLRPVLHQR 206 Query: 188 ESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRN 247 + RR +QFQK++ LID +I+ E LRPEW+A ETGMSVRSLYR+FAD+GLVVAQYI+N Sbjct: 207 DPAPSRRVKQFQKIIALIDASIQSEHLRPEWLASETGMSVRSLYRLFADQGLVVAQYIKN 266 Query: 248 RRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKFR 301 RRLD CA A+++ DDEKLAGIG+ WGFSD SHFST FKQRFG+TPG+YR++ R Sbjct: 267 RRLDLCAQALQNVHDDEKLAGIGYRWGFSDHSHFSTAFKQRFGVTPGQYRKRCR 320 >UniRef50_C5CKL4 Transcriptional regulator, AraC family n=1 Tax=Variovorax paradoxus S110 RepID=C5CKL4_VARPS Length = 320 Score = 260 bits (666), Expect = 3e-68, Method: Composition-based stats. Identities = 76/307 (24%), Positives = 127/307 (41%), Gaps = 11/307 (3%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLLTER----YTGVLDTHFAKGLKLSTVTTSGVNLSRT 59 W I V + E + G + H L +S V + + RT Sbjct: 11 PRGQRLAYWTDMICNVYVQLGCDPVREGDSGNFEGSIRQHTLPSLDVSVVRSGPQKVMRT 70 Query: 60 WQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISL 119 + S D F Q GQ ++ QD R + AGD L D++RP L + +S +QI L Sbjct: 71 PGHISRSGDDCFLVSIQARGQGVVRQDGRDAVLAAGDFALYDSTRPYQLLFDDSFEQIVL 130 Query: 120 LLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMN-----NPALSETESEAALQ 174 LP L H + + A + L +++ PA + + Sbjct: 131 KLPGERLRSELHHTEALTATTVSGREGAGHLLLGMIRTLREDIDTLQPASALAVANGVQS 190 Query: 175 AMVCLLRPVLHQRES-VQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRM 233 +V L+ + R + +V ID+ + + L +A + G+S ++R+ Sbjct: 191 ILVAGLQTLPAARSPGLSSLTAYHLARVKRRIDEQLADPSLSVGSLAAQLGVSASHIHRV 250 Query: 234 FADKGLVVAQYIRNRRLDFC-ADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMT 292 F + L +QYI RRL+ C D + +A I + GF+D +HFS F++RFG + Sbjct: 251 FKSEPLTPSQYIWERRLEACSRDLLEARLAGRPVAEIAYGRGFNDAAHFSRAFRERFGCS 310 Query: 293 PGEYRRK 299 P E+R++ Sbjct: 311 PREWRQQ 317 >UniRef50_A5V4Y7 Transcriptional regulator, AraC family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V4Y7_SPHWW Length = 329 Score = 256 bits (655), Expect = 6e-67, Method: Composition-based stats. Identities = 73/303 (24%), Positives = 120/303 (39%), Gaps = 7/303 (2%) Query: 5 VDNEFQQWLSQINQVCGNFTGRL-LTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEV 63 W + ++ ++G L +++S V + + RT + Sbjct: 22 AKERLPYWCDMVCDTFVELDCESQESDSFSGELRNIAFGAIQISMVESVAQRVRRTRSRI 81 Query: 64 KGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPR 123 GS F QL G + QD R ++ GD L D++RP L + +S Q+ L LPR Sbjct: 82 AGSTRDHFLLSLQLRGTGAICQDSRVAKLSPGDFALYDSTRPYELRFDDSFSQVVLRLPR 141 Query: 124 TLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSET-----ESEAALQAMVC 178 + + A R+D + L+ +++ A + A+ M Sbjct: 142 ETVTGRLIDSHMLTARRIDGQRGVGLLASSFIRQLHEQRADIDDLSLGRLQANAVDLMAT 201 Query: 179 LLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKG 238 L + + Q+V ID N+ + L E IA G+S R L ++F Sbjct: 202 ALAEQTGGQARTNEGQAIIRQRVCAFIDRNLGDHRLTCEGIASAHGISQRYLRKIFESSS 261 Query: 239 LVVAQYIRNRRLDFCADAIRHA-ADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 V+ +I +RRL+ + + IGF GF D +HFS F+ RFGM+P E+R Sbjct: 262 TTVSDWIWSRRLEQAKADLSDPLLAHVSVTAIGFDVGFKDAAHFSRAFRSRFGMSPREWR 321 Query: 298 RKF 300 Sbjct: 322 NSA 324 >UniRef50_B4E7T1 AraC family regulatory protein n=1 Tax=Burkholderia cenocepacia J2315 RepID=B4E7T1_BURCJ Length = 317 Score = 255 bits (651), Expect = 2e-66, Method: Composition-based stats. Identities = 75/309 (24%), Positives = 135/309 (43%), Gaps = 11/309 (3%) Query: 2 NPAVDNEFQQWLSQINQVCGNFTGRLLTER----YTGVLDTHFAKGLKLSTVTTSGVNLS 57 + W + + T R +TG +D + ++ V + + Sbjct: 8 EAPAAEQADYWSAALASSFVKLDFEPTTSRSGRPFTGHIDQGSLAYVDVAVVNSRAQEVH 67 Query: 58 RTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQI 117 RT + V+ D F Q++G+ +EQD RQ + AGD +L D +RP L +++ +Q+ Sbjct: 68 RTSRLVRQEDADLFLISVQVAGRGELEQDGRQAVLSAGDCSLYDTTRPYHLSFRDDFEQL 127 Query: 118 SLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN-PALSETESEAALQAM 176 L +PR L P + A + + L L+ N +++ E+ ++ Sbjct: 128 VLSIPRDRLRIRIPAADRLTAIPIRGVNGLGSLFFDLVTSIPRNLESMTAQVRESVSNSV 187 Query: 177 VCLLRPVLHQRESVQPRRER-----QFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLY 231 + L+ L S P ++ + + +N+ + L IA GMSV SLY Sbjct: 188 LDLVATALAGLPSPIPAPASNLKQFHLNRIKSYVIENLSDAELDIARIAQTLGMSVSSLY 247 Query: 232 RMFADKGLVVAQYIRNRRLDFCA-DAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFG 290 R FA +G ++Q+I ++RL C + + + I WGF+D +HFS F+++FG Sbjct: 248 RAFASEGCPLSQWIWDQRLHACRKALLDESCANLSAKQIAMSWGFNDPAHFSRAFRRKFG 307 Query: 291 MTPGEYRRK 299 +P R + Sbjct: 308 ESPNALRTR 316 >UniRef50_B1KM98 Transcriptional regulator, AraC family n=2 Tax=Gammaproteobacteria RepID=B1KM98_SHEWM Length = 330 Score = 252 bits (644), Expect = 1e-65, Method: Composition-based stats. Identities = 70/309 (22%), Positives = 135/309 (43%), Gaps = 9/309 (2%) Query: 1 MNPAVDNEFQQWLSQINQVCGNFTGRLLT-ERYTGVLDT-HFAKGLKLSTVTTSGVNLSR 58 ++ A W QI L +R+ G + L +S V ++R Sbjct: 14 LDVASYERIDYWREQICHEFVQLDCEPLNKDRFHGEIRGGLNFGLLSVSEVQGEAQIVTR 73 Query: 59 TWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQIS 118 T Q++ S +A+F FQL Q +++Q+ R+ + G TL D+S P SL +++ Q+ Sbjct: 74 TKQQIAHSSEAYFLMSFQLFQQGVVKQNGREAILQPGSFTLYDSSEPYSLTFEKEFHQLI 133 Query: 119 LLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVC 178 + +P+ +L +Y H + A L + + + + +T ++ + Sbjct: 134 IQMPKHVLSRYLIHPEKYTAVPLSGKEGIGAVLSNFIFSVVKEYKELDTIHPELVENFLN 193 Query: 179 LLRPVLHQR------ESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYR 232 ++ + ++ ++V++ I++N L + IA G+S+R LY+ Sbjct: 194 MIAMAYSCSVMHNKLKKKALSKDALVERVLSYIENNYANHQLSNQHIADAHGISLRYLYK 253 Query: 233 MFADKGLVVAQYIRNRRLDFCADAIR-HAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGM 291 +F + + Q I+ RRL ++ + D L + + GF+ SHFS FK FG Sbjct: 254 LFQKQEHTIHQIIQKRRLMMSRQLLQEDSKFDFSLDSLSYAVGFTSSSHFSRAFKDYFGE 313 Query: 292 TPGEYRRKF 300 P ++R+K Sbjct: 314 CPRDFRQKI 322 >UniRef50_B8H6K6 Transcriptional regulator, AraC family n=2 Tax=Actinomycetales RepID=B8H6K6_ARTCA Length = 321 Score = 252 bits (644), Expect = 1e-65, Method: Composition-based stats. Identities = 67/305 (21%), Positives = 130/305 (42%), Gaps = 7/305 (2%) Query: 1 MNPAVDNEFQQWLSQINQVCGNFTGRLLTER-YTGVLDTHFAKGLKLSTVTTSGVNLSRT 59 + + + F W + + + G L + + + VT + + RT Sbjct: 15 LTTSTASSFDHWKHLVAESFVPLAAETADAGNFHGQLRSRVLDRMSIVEVTATSHEVHRT 74 Query: 60 WQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISL 119 + + + +F QL G ++ QD R+ + GD+ + D SRP +L ++++++ + + Sbjct: 75 PALIARAHERYFKLNLQLEGTGLLIQDNREAVLRPGDLAIYDTSRPYTLAFEDTTRIMVV 134 Query: 120 LLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQES-MNNPALSETESEAALQAMVC 178 + P L + + A R+ D + + + +++ N L+ + Sbjct: 135 MFPCDTLTLPTDYVGQLAAVRMAGDSGLSGIVGQFIRQLSGNLDVLNGPSGSRLAANALD 194 Query: 179 LLRPVLHQRESVQPRR----ERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMF 234 L+ +LH + P R V ID N+ + +L P IA +S R L+ +F Sbjct: 195 LVSTMLHAEMDISPDRMKPQALLAVAVREYIDANLSDPLLSPASIAAAHFISTRHLHNVF 254 Query: 235 ADKGLVVAQYIRNRRLDFCADAIRHA-ADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTP 293 + G VA +IR +RL+ +R + + WGF D +HFS F+ FG+ P Sbjct: 255 HESGTTVAGWIRTQRLEGAGRDLRDPLHAGLPVGAVAARWGFLDAAHFSRTFRDAFGVPP 314 Query: 294 GEYRR 298 ++RR Sbjct: 315 SDWRR 319 >UniRef50_B0KNJ7 Transcriptional regulator, AraC family n=1 Tax=Pseudomonas putida GB-1 RepID=B0KNJ7_PSEPG Length = 304 Score = 251 bits (642), Expect = 2e-65, Method: Composition-based stats. Identities = 132/303 (43%), Positives = 198/303 (65%), Gaps = 4/303 (1%) Query: 1 MNPAVD---NEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLS 57 M PA + FQ WLSQ+N+ CG+F GR L + G L+ A + +S V + VNL Sbjct: 1 MIPATRITDDRFQAWLSQVNEACGHFNGRKLDPGFVGQLEKCQAGQISMSIVDMTQVNLF 60 Query: 58 RTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQI 117 R +E++ S +Y V Q++G + +E ++++ AGD+TL+DAS P +++ + S+Q+ Sbjct: 61 RGPREIRASGADNYYAVLQMAGTSHIEHQGARIELQAGDLTLIDASAPLDMHFHQRSRQL 120 Query: 118 SLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMV 177 SL+LPR +E CA+R++A P+ ++ ++ E+ +S+ ES+A L A++ Sbjct: 121 SLILPRARVESGTRGTGVACAKRIEAQTPLANMARLMMLETGRTRHMSDHESQAVLDALI 180 Query: 178 CLLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADK 237 LLRP + ++V ER F+K + LID I E L PE+IA E G+S+RSLYR+FA Sbjct: 181 ALLRPAI-SHDTVPGSHERMFRKALALIDQRITCEQLTPEFIAREVGISMRSLYRIFAKH 239 Query: 238 GLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 GLV+AQYIRNRRLDFCA+ +R+ A D+K++ +G+ WGFSD S+FST FK RFG+TPGEYR Sbjct: 240 GLVIAQYIRNRRLDFCAEHLRNPAMDQKVSSLGYAWGFSDSSYFSTAFKARFGVTPGEYR 299 Query: 298 RKF 300 R+ Sbjct: 300 RQH 302 >UniRef50_A0K0Q9 Transcriptional regulator, AraC family n=2 Tax=Arthrobacter RepID=A0K0Q9_ARTS2 Length = 319 Score = 251 bits (641), Expect = 2e-65, Method: Composition-based stats. Identities = 67/305 (21%), Positives = 125/305 (40%), Gaps = 7/305 (2%) Query: 1 MNPAVDNEFQQWLSQINQVCGNFTGRL-LTERYTGVLDTHFAKGLKLSTVTTSGVNLSRT 59 + +V F W + Q + + G + + L + V+ SG ++ RT Sbjct: 13 LTSSVATSFDHWRHLVAQSFVPLAAETDHPDTFRGRMRSRVLDRLCIVEVSASGHSVHRT 72 Query: 60 WQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISL 119 V +F QL G ++ QD R+ + GD+ + D +RP +L ++E ++ + + Sbjct: 73 PALVARPGQRYFKLNLQLEGTGLLIQDNREAVLRPGDLAIYDTNRPYTLAFEEQARVMVV 132 Query: 120 LLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN-----PALSETESEAALQ 174 + P L + + A RL + + + + N + AL Sbjct: 133 MFPHDSLSLPPDYVGQLSAVRLAGGHGLTGIVGPFIAQLAENLEALSGPSGSRLAANALD 192 Query: 175 AMVCLLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMF 234 + +L L + V I+ N+ + L P IA +S R L+ +F Sbjct: 193 LVSTMLHSELDMARDSMKPQVLLATSVREYIEANLADPQLSPASIAAAHFISTRHLHNIF 252 Query: 235 ADKGLVVAQYIRNRRLDFCADAIRHA-ADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTP 293 + G VA +IR++RL+ +R + + + WGF D +HFS F+ +G +P Sbjct: 253 HETGTTVASWIRSQRLERIRRDLRDPLLNGTSVGAVAARWGFLDAAHFSRTFRDAYGESP 312 Query: 294 GEYRR 298 ++RR Sbjct: 313 SDWRR 317 >UniRef50_Q0SCS8 Transcriptional regulator, AraC family protein n=2 Tax=Rhodococcus RepID=Q0SCS8_RHOSR Length = 342 Score = 251 bits (641), Expect = 3e-65, Method: Composition-based stats. Identities = 75/306 (24%), Positives = 127/306 (41%), Gaps = 10/306 (3%) Query: 4 AVDN--EFQQWLSQINQVCGNFTG----RLLTERYTGVLDTHFAKGLKLSTVTTSGVNLS 57 + +F+ W ++ R+TG L T GL+LS V V++ Sbjct: 7 PARDDGQFEHWRQAVSTAFVPLAVVSTAEDGPGRFTGTLRTTALGGLQLSEVGGHAVDVR 66 Query: 58 RTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQI 117 RT +K SD QLSG ++ QD+R+ +G GD + D S+P L++ Sbjct: 67 RTRTSIKRSDPGLVKVGLQLSGSGVIVQDDREAVLGPGDFAVYDTSKPYDLHFAGDFSMF 126 Query: 118 SLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN-PALSETESEAALQAM 176 L+ PR LL + A R+ M L L ++ + + A+ Sbjct: 127 VLMFPRELLRIASRELGTVSARRIRGSTGMGALVSPFLTNLHHSVVTGTMPTTPLVEDAV 186 Query: 177 VCLLRPVLHQRESVQPRRE--RQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMF 234 + LL + V + ID ++ + L +A +S R L +MF Sbjct: 187 LDLLGAAVQSEAPADATAPGASLLLAVKSFIDAHLHDPTLDTAAVAAHHHVSTRHLQKMF 246 Query: 235 ADKGLVVAQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTP 293 G VA +IR+RRL+ C ++ + + I +G + SHFS +FK+ +G++P Sbjct: 247 EADGHTVAGWIRHRRLEKCRRDLKDIRFRGDSIGTICARYGLVNSSHFSRLFKETYGVSP 306 Query: 294 GEYRRK 299 +R + Sbjct: 307 RAFREQ 312 >UniRef50_Q5YXZ9 Putative transcriptional regulator n=1 Tax=Nocardia farcinica RepID=Q5YXZ9_NOCFA Length = 334 Score = 250 bits (640), Expect = 4e-65, Method: Composition-based stats. Identities = 73/302 (24%), Positives = 121/302 (40%), Gaps = 6/302 (1%) Query: 2 NPAVDNEFQQWLSQINQVCGNFTGRL-LTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTW 60 P F W I+ T + G L H L+L+ V V + R Sbjct: 9 TPPSAERFDTWQETISHAFVPLTATPLTAAGFDGTLSCHEVGSLQLNEVGGGPVRVERDP 68 Query: 61 QEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLL 120 + ++ +D + Q G+ + QD R +G GD+ + D RP +L++ + + I + Sbjct: 69 RAIRRADPGYIKLGLQTRGRGAVVQDGRTAVLGPGDLAVYDTGRPYTLHFDQPFQMIVAM 128 Query: 121 LPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSE-----TESEAALQA 175 PR + I A R+ + L L+ A + ++A L Sbjct: 129 FPRESWQIRAAELTEITARRIGGRGGVGALLAPFLRAIPATLACGDLSRDIHIADAVLDL 188 Query: 176 MVCLLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFA 235 + + E + +V ID ++ + +L IA +SVR L R+F Sbjct: 189 LTAAVTEFGGVEERARSAGAGLLVQVKAFIDAHLADPMLSVPDIAAAHHISVRYLQRLFE 248 Query: 236 DKGLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGE 295 +G V +IR RRL+ + D + + WG +D SHFS +FK +GMTP + Sbjct: 249 TEGTTVTTWIRQRRLERIRRDLADPRIDRSTSAVAARWGLADASHFSKLFKAAYGMTPRQ 308 Query: 296 YR 297 YR Sbjct: 309 YR 310 >UniRef50_Q0RX84 Transcriptional regulator, AraC family protein n=2 Tax=Nocardiaceae RepID=Q0RX84_RHOSR Length = 345 Score = 247 bits (632), Expect = 3e-64, Method: Composition-based stats. Identities = 75/297 (25%), Positives = 125/297 (42%), Gaps = 7/297 (2%) Query: 5 VDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVK 64 + W +++ +TG L +S V + RT +++ Sbjct: 20 PVDRVDCWRDLVSRAFVPLDADAAAPDFTGHLRITELGSTIVSRVDAGAHTVRRTRKQIS 79 Query: 65 GSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRT 124 GS+ ++ QL G ++EQD R+ + GD L D +P +L + + + PR Sbjct: 80 GSERGYYKLGLQLRGDGLLEQDGREALLRPGDFALYDTDQPYTLAFTAPTDMAVFMFPRP 139 Query: 125 LLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN-----PALSETESEAALQAMVCL 179 L I A R+ + L LL ++ P + T ++A L M L Sbjct: 140 RLPLPPIMAHDILARRISRSDELGCLLSPLLVRLVDQVDDNRPNAALTLADAVLDLMAAL 199 Query: 180 LRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGL 239 L E + E + T ID N+ L P+ +A +S R L+++F+ G Sbjct: 200 LAGNNGTPEPLP--HETLLVQAKTFIDANLSNPDLNPDLVAAAVHVSTRYLHKLFSADGE 257 Query: 240 VVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEY 296 VA++IR+RRL+ C + ++ +G WG D +HFS FK RF M+P E+ Sbjct: 258 PVARWIRHRRLEQCRRDLSGHTAVPSVSAVGNKWGLPDAAHFSRAFKARFAMSPAEF 314 >UniRef50_Q500U0 Helix-turn-helix, AraC type n=2 Tax=Pseudomonas syringae group RepID=Q500U0_PSEU2 Length = 324 Score = 246 bits (629), Expect = 6e-64, Method: Composition-based stats. Identities = 70/298 (23%), Positives = 125/298 (41%), Gaps = 6/298 (2%) Query: 6 DNEFQQWLSQINQVCGNFTGR-LLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVK 64 + W + + + G L +H GL L V + R + Sbjct: 13 RERAEFWQEVVCSTFVPLECAFPDRQNFQGRLRSHSVAGLGLVEVQACEQTVVRDTSSIS 72 Query: 65 GSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRT 124 SDD + L G+A + Q+ R+ + GD + D RP L++ + Q + +PR Sbjct: 73 RSDDEFVLVSLALEGRAQVSQEGREAILEVGDFAIYDTRRPYRLHFDSAFSQTVVQIPRN 132 Query: 125 LLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNP-ALSETESEAALQAMVCLLRPV 183 L+Q + + + A + D P+ L + E++ + + LL Sbjct: 133 SLQQRLCNLEYLTALSMSRDNPLNGLVFDFFTGLAALENRVGESQQARITEQGLDLLAMA 192 Query: 184 LHQR---ESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLV 240 L +R ++ RR ++ I N+ + L ++ G+S R + +F D+ Sbjct: 193 LSERVKGQAQGSRRSGLLLRIKDHIQANLADTKLSLASVSVRFGVSTRYVSSLFQDEQTS 252 Query: 241 VAQYIRNRRLDFCADAIRHA-ADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 +Y+ RL CA +R + +++ I + WGFSD ++FS VF+QRFG+ EYR Sbjct: 253 FGRYLLGSRLQRCASDLREPLLANRQISEIAWRWGFSDVAYFSRVFRQRFGVPAREYR 310 >UniRef50_A8GAE8 Transcriptional regulator, AraC family n=1 Tax=Serratia proteamaculans 568 RepID=A8GAE8_SERP5 Length = 302 Score = 245 bits (627), Expect = 1e-63, Method: Composition-based stats. Identities = 143/293 (48%), Positives = 193/293 (65%), Gaps = 2/293 (0%) Query: 9 FQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDD 68 F++WL++IN CG F R L ++G + A L+LS V + L RT QE+ SD Sbjct: 12 FEEWLAKINSACGRFCARTLGPGFSGAMQEFRAHALRLSVVDAAQTRLYRTQQEIARSDG 71 Query: 69 AWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQ 128 + F+TVFQL G ++MEQ +RQ + AGD+TL+DASR S +Q+ S+QISLL+PR+ LEQ Sbjct: 72 SHFFTVFQLRGSSLMEQGDRQAVLSAGDVTLIDASRTSSFTFQQDSRQISLLMPRSYLEQ 131 Query: 129 YFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPVLHQRE 188 + C RLDA +V+LS +L+ M + +S ESEA L A+ LLRP L R Sbjct: 132 SASDVQ--CVRRLDAQSSVVRLSRQLVLGCMQDTQMSAPESEAILNAVATLLRPALVDRV 189 Query: 189 SVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNR 248 R F + + ID +I+ LRPEWIA E G+SVRSLYRMFA +GLVVAQYI++R Sbjct: 190 VGGDSPPRSFSRTLAFIDTHIQSPQLRPEWIADELGVSVRSLYRMFARQGLVVAQYIKHR 249 Query: 249 RLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKFR 301 RLD CA A+R A + +KLA I + WGF+D SHFST FK RFG++P EYR++++ Sbjct: 250 RLDLCAQALRSAPERQKLATISYDWGFADHSHFSTAFKSRFGVSPSEYRKQYQ 302 >UniRef50_UPI0001873BA5 Helix-turn-helix, AraC type n=1 Tax=Pseudomonas syringae pv. tomato T1 RepID=UPI0001873BA5 Length = 311 Score = 243 bits (622), Expect = 4e-63, Method: Composition-based stats. Identities = 70/301 (23%), Positives = 131/301 (43%), Gaps = 12/301 (3%) Query: 4 AVDNEFQQWLSQINQVCGNFTG-RLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 F+ W ++ G RL + L+ + + +S + R ++ Sbjct: 11 PPKERFEHWQDVVSSTYGLVASQRLNKTPFDARLNVRDQGSFTFTRIQSSPIQYQRLGRD 70 Query: 63 VKGSDDAWFYTVFQLS--GQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLL 120 + F L A + Q+ R+ + G GDI L D++RP + + E QI L Sbjct: 71 ---QESDHFLISLSLGCCPDAFVVQNNRESRQGTGDIVLYDSARPYACGYPEGDDQIVLT 127 Query: 121 LPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLL 180 +PR L ++ P+ + + L P+ Q++ LL E + L + + E A + +L Sbjct: 128 VPRAFLLEHVPNAERLVCRTLSGQSPLGQIARTLLAEIWSIEPLPQQQGERLNAAFLDVL 187 Query: 181 RPVLHQRES-----VQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFA 235 L + + + +Q ++V + N+ + L E IA T +S R+L R+FA Sbjct: 188 YTALDSAFALTDCKRESFQTQQLKRVKQYLLSNLPDAGLTVESIAQATHVSPRTLNRLFA 247 Query: 236 DKGLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGE 295 G V +++ +RL C A+ +++ + GF++ SHFS FK +G++P + Sbjct: 248 PHGTTVIRWLWQQRLAACHTALLKGRA-RQVSDVALSMGFTNLSHFSRAFKNAYGVSPQQ 306 Query: 296 Y 296 Sbjct: 307 L 307 >UniRef50_B1Z4N2 Transcriptional regulator, AraC family n=6 Tax=Burkholderia cepacia complex RepID=B1Z4N2_BURA4 Length = 352 Score = 241 bits (616), Expect = 2e-62, Method: Composition-based stats. Identities = 67/303 (22%), Positives = 137/303 (45%), Gaps = 7/303 (2%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRL-LTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 +V + W I ++ + + + G + L++S + S ++R + + Sbjct: 43 SVSQRIEFWREMILRLFADVQIAAVQKDDFFGRVRQRKCDKLRISDIHASEQAVTRRFHQ 102 Query: 63 VKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLP 122 + + ++ V L G +EQD + V + GD + DA+RP L + +S ++I + +P Sbjct: 103 ARSEYEDKYFAVLMLEGSQSVEQDGKIVTLRPGDFAVYDATRPHHLQFGQSWREIVVSIP 162 Query: 123 RTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN-PALSETESEAALQAMVCLLR 181 RT L Q + A + + + L++ + +SE E + L+ Sbjct: 163 RTTLNQLVVGMEHRTACPMPTGQGVGCVMRGFLEQMSSQIRHVSEDEMLQLSDTAISLIA 222 Query: 182 PVLHQRESVQPRRERQ----FQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADK 237 + + + R +V + +++R+ L P + TG+S R + ++F + Sbjct: 223 MTIGSLQRNDVAQSRMKALTLTRVKRHLLEHLRDPELNPTMVEQATGISSRYINKLFEAE 282 Query: 238 GLVVAQYIRNRRLDFCADAIRHAADD-EKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEY 296 + +YI N RL+ CA+ + + +++ I WGF+D SHFS F++RF + P + Sbjct: 283 NTSLMRYIWNLRLERCAEDLANPQCGVLRVSDIALRWGFNDMSHFSRAFRERFAVAPRAW 342 Query: 297 RRK 299 RR+ Sbjct: 343 RRQ 345 >UniRef50_A2SEG7 Transcriptional regulator, AraC family n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SEG7_METPP Length = 318 Score = 240 bits (613), Expect = 4e-62, Method: Composition-based stats. Identities = 67/305 (21%), Positives = 123/305 (40%), Gaps = 9/305 (2%) Query: 5 VDNEFQQWLSQINQVCGNFTGRLLTE--RYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 W + + + R+ G + L LS VT S + RT + Sbjct: 12 PAQRLAYWTDGVCDTYVQLDCDAIGDASRFEGEIAADALSTLTLSRVTASAQRVRRTPAK 71 Query: 63 VKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLP 122 + + + +F Q G + QD R + GD L D++RP L + + +Q L+LP Sbjct: 72 IARASEDYFLVSIQTQGCGAVVQDGRVAHLSPGDFALYDSTRPYELRFDAAFQQYVLMLP 131 Query: 123 RTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN-----PALSETESEAALQAMV 177 L + A + L +++ P + +++ Q ++ Sbjct: 132 GPTLRTALTDTPSLTACAVSGRRGAGHLMIGMIETLSAEIATLAPESAAAVADSVTQILI 191 Query: 178 CLLRPVLHQRESVQPRRERQ-FQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFAD 236 L + R R Q+V L+ + +R+ L IA G+S +L+R +A Sbjct: 192 AGLSTLPGARPPPVSRLVALHRQQVKALVRERLRDPDLTVVRIAERLGVSPSTLHRAWAG 251 Query: 237 KGLVVAQYIRNRRLDFCADAIRHAADD-EKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGE 295 + +A +I+ RL+ + A +++ + + WGF D +HFS F++RFG +P E Sbjct: 252 EACSLADWIQTERLEAARRDLCAAQQRLRRVSELAYSWGFKDAAHFSRAFRRRFGCSPRE 311 Query: 296 YRRKF 300 R + Sbjct: 312 LRARI 316 >UniRef50_Q0S4H2 Probable transcriptional regulator, AraC family protein n=2 Tax=Rhodococcus RepID=Q0S4H2_RHOSR Length = 329 Score = 239 bits (610), Expect = 1e-61, Method: Composition-based stats. Identities = 72/307 (23%), Positives = 131/307 (42%), Gaps = 12/307 (3%) Query: 4 AVDNE---FQQWLSQINQVCGNFTGRLLT-ERYTGVLDTHFAKGLKLSTVTTSGVNLSRT 59 F ++ ++ + + GV+ +++S VT + + RT Sbjct: 10 PAAQRLVSFDEFREAVSDAFVPLEMTSADHDDFRGVVRGVTVGAVRISEVTAAPHVIRRT 69 Query: 60 WQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISL 119 + ++ ++ +F Q+ G ++ QD R+ + GD + D +RP L + + + + + Sbjct: 70 PRTIRAANPDYFKLGLQVRGNCVLSQDGRETALTPGDFAIYDTTRPYQLSFDDRFRMLVV 129 Query: 120 LLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN-PALSETESEAALQAMVC 178 + PR LL + A R+ + + LL+ S T + A++ Sbjct: 130 MFPRHLLRVPPDGVAQLTARRVPGGQGLGAVVTPLLRGLGEQIADASPTVAVHLGDAVLD 189 Query: 179 LLRPVLHQRES------VQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYR 232 L+ ++ Q R + +V ID+ + + L IA +SVR L + Sbjct: 190 LVAAAFAEQLHLAGGVLPQSRGDALLARVTAFIDERLADRDLDLHSIAAAHHISVRHLQK 249 Query: 233 MFADKGLVVAQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGM 291 MF G V+ +IR RRL+ C + + D ++ IG WGF+D +HFS +FK G Sbjct: 250 MFEADGDTVSGWIRRRRLEQCRRDLADPSYRDLPVSAIGARWGFADAAHFSRLFKNAHGS 309 Query: 292 TPGEYRR 298 TPG YR Sbjct: 310 TPGRYRA 316 >UniRef50_A2SM26 Transcriptional regulator, AraC family n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SM26_METPP Length = 324 Score = 238 bits (609), Expect = 1e-61, Method: Composition-based stats. Identities = 74/302 (24%), Positives = 132/302 (43%), Gaps = 5/302 (1%) Query: 2 NPAVDNEFQQWLSQINQVCGNFTGRLL-TERYTGVLDTHFAKGLKLSTVTTSGVNLSRTW 60 + A+ + W + ++ + + L GL++ R Sbjct: 23 DVALADRTDAWEAALSDNFRRWQVPDRVAPEFNARLRHRDVAGLRVVECICDPCGGRRLP 82 Query: 61 QEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLL 120 + V A+ SG+ + + +V +G GD+ + + +P E ++SL+ Sbjct: 83 RHVSQEGAAYIGVQITRSGRESLRAGDERVAVGPGDLVIWTSDQPMEFTVTERLHKVSLI 142 Query: 121 LPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN-PALSETESEAALQAMVCL 179 LP +++ P LD+ + + + ++ + L E A +A V L Sbjct: 143 LPWDDVKERLPRTGRFRGTVLDSRSGIGAVLYSHIESLASQLEDLEAGELSAVRRATVEL 202 Query: 180 LRPVLHQRESVQPR--RERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADK 237 L + R PR +Q ++V I D++++E L P IA +S R L+ +F Sbjct: 203 LTAAMSCRLEPAPRGLSLQQLKRVQDYILDHLQDETLTPGSIAQAHHISPRYLHLLFGKT 262 Query: 238 GLVVAQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEY 296 G V+ YIR +RL+ C +A+ + + + +A I + WGF+D +HFS VFKQ FG PG Sbjct: 263 GQSVSAYIRQQRLERCGEALSNPSYREHSVAEIAYQWGFTDPAHFSRVFKQHFGHPPGHC 322 Query: 297 RR 298 RR Sbjct: 323 RR 324 >UniRef50_C0GAC0 AraC-family transcriptional regulator n=4 Tax=Brucella RepID=C0GAC0_9RHIZ Length = 332 Score = 238 bits (609), Expect = 1e-61, Method: Composition-based stats. Identities = 69/304 (22%), Positives = 120/304 (39%), Gaps = 7/304 (2%) Query: 5 VDNEFQQWLSQINQVCGNFTGRLL-TERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEV 63 + + W I +R++G L T + +S +T+ + R Sbjct: 24 APDRSRHWHDAIASAYFPLDLHFREADRFSGDLTTWEFGNVSISRLTSDALQYLRLPHHF 83 Query: 64 KGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPR 123 S + F + + Q R+V+ G L +S P E++ L + Sbjct: 84 GSSREEEFLVTVPVKAEVYFSQCGREVRCRPGGFFLERSSEPYHFSHAEAADMWVLKVEG 143 Query: 124 TLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN-PALSETESEAALQAMVCLLRP 182 L C + A+ L +LQ + +++ + +V LL Sbjct: 144 DALCGRMRAPDRFCTLQFGANNGAGGLFTDMLQLLPDRFDGMTQEARITVGRQLVDLLVL 203 Query: 183 VLHQRESV-----QPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADK 237 + + V R ++ I N+++ L P+ IA G+S R L+ +F D Sbjct: 204 AIKADDRVLTSGNSTVRSAHLARIEAYIRTNLQDFRLDPDRIARACGISTRYLHELFKDT 263 Query: 238 GLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 G V +IR +RL C +A+ + + A I + WGF+DQ+ FS FK +FG+ PGE+R Sbjct: 264 GQTVRHWIREQRLAACREALEDPDNIQTAAEIAYSWGFNDQTQFSRAFKAQFGLPPGEHR 323 Query: 298 RKFR 301 R Sbjct: 324 ENAR 327 >UniRef50_P72312 Nitrilase regulator n=1 Tax=Rhodococcus rhodochrous RepID=P72312_RHORH Length = 319 Score = 237 bits (606), Expect = 3e-61, Method: Composition-based stats. Identities = 60/297 (20%), Positives = 118/297 (39%), Gaps = 4/297 (1%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLLTE-RYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 + + W I + L +E + G + T ++++T ++ ++RT + Sbjct: 11 SAPDRVALWHDVICRSYVPLNITLTSEQPFIGTVSTGNLGTVRIATSSSLPQQITRTRRL 70 Query: 63 VKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLP 122 ++ + + Q +G A+++Q R ++G G + D P + + + P Sbjct: 71 IRQDEREYLMVGVQSAGHALVQQHGRTARVGRGGLVFWDTRHPYDILFPTDWRMSVFQFP 130 Query: 123 RTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQES-MNNPALSETESEAALQAMVCLLR 181 R + A + D + ++ + A E + + V LL Sbjct: 131 RYSFGFTEDFIGRMTAVNVGGDRGIGRVVSSFMTSINDATDAGDLAEVASLHNSAVDLLS 190 Query: 182 PVLHQR-ESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLV 240 + + + V+ I N+ + L IA E +SVR+L+R+F+ G Sbjct: 191 AAIRTELADQAAASDGLLECVLAYIRQNLADPNLCASQIAAEHNVSVRTLHRLFSATGQG 250 Query: 241 VAQYIRNRRLDFCADAIRHAADDE-KLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEY 296 VA++IRN RL+ + ++ + WGF D S FS FK +G+T E+ Sbjct: 251 VAEHIRNLRLERIKTELADPTSRRYTISALARKWGFLDPSTFSRAFKDAYGITAREW 307 >UniRef50_B1G4X3 Transcriptional regulator, AraC family n=1 Tax=Burkholderia graminis C4D1M RepID=B1G4X3_9BURK Length = 312 Score = 236 bits (603), Expect = 6e-61, Method: Composition-based stats. Identities = 68/295 (23%), Positives = 119/295 (40%), Gaps = 8/295 (2%) Query: 5 VDNEFQQWLSQINQVCGNFT-GRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEV 63 F W + + C L ++ G L L +S + R + Sbjct: 12 PSQRFAYWQEVVCRHCIPAASVPLSGNQFDGSLRVRTLGTLIISELIAPQHRWQRDGAHI 71 Query: 64 KGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPR 123 + + F+ + G+ + Q R V GD+ L DA+RP + I + +PR Sbjct: 72 RTGPNDSFWVGLMMKGEGRLAQSGRTVVQREGDMVLYDAARPFEFELAAGTICI-VEVPR 130 Query: 124 TLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALS--ETESEAALQAMVCLLR 181 +L+ FP + A + AD+P+ L ++++ES + A+V +L Sbjct: 131 KVLDFRFPLADTLTATCIGADMPIGHLLAQMIRESAARDLSGNQGSSGSLVGSAIVDMLA 190 Query: 182 PVL---HQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKG 238 L R + E ++ ID ++ L E +A +S R+L R FA +G Sbjct: 191 ATLEIQAGRPAHVSAHEALVERTKAYIDRHLDVASLDVEQLAAAQSVSSRTLTRAFAQQG 250 Query: 239 LVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTP 293 ++ RRL+ A++ + +GFSD SHFS F++ +GM+P Sbjct: 251 STPMSWLWRRRLEASYCALKEGHA-RNVTEAALRFGFSDLSHFSRAFRKVYGMSP 304 >UniRef50_Q5YW11 Putative transcriptional regulator n=1 Tax=Nocardia farcinica RepID=Q5YW11_NOCFA Length = 324 Score = 234 bits (598), Expect = 2e-60, Method: Composition-based stats. Identities = 74/300 (24%), Positives = 129/300 (43%), Gaps = 7/300 (2%) Query: 5 VDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVK 64 D+ W Q+ L R+TG + ++ L+++ + S +++R + Sbjct: 15 PDDSLLAWRVQVTDFFPPLAIEPLGARFTGSISGARSRELQVTEIVGSAHHVARRPAGHR 74 Query: 65 GSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRT 124 SD +F QL G + Q + ++ G I + D ++P L + S+ + L P+ Sbjct: 75 TSDGEYFKLNVQLDGHGFVRQAGNETRLAPGSIAIYDFAQPYDLVFDGDSRFLVALFPKD 134 Query: 125 LLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEA-ALQAMVCLLRPV 183 L + A L AD L L+ N L S A + + L+ Sbjct: 135 ALGLPDALAADLMAAPLAADDGTAPLVSSYLRSLAENLGLLAGPSGAKVSRVFLDLVTTF 194 Query: 184 LHQRESVQPRRER-----QFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKG 238 L ++ + + R ++ IDD++ + L P +A +SVR L+++F G Sbjct: 195 LGEQLNRRIGSARADLGTLTMTILRYIDDHLADPDLDPARLAEAHHISVRYLHKLFEPTG 254 Query: 239 LVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRR 298 + V Q+IR RRL+ + D +A + GF D +F VFKQ +GMTPG++R Sbjct: 255 VSVGQWIRQRRLEHARAELT-GRADLAVAEVAHRSGFVDPGYFGRVFKQAYGMTPGQWRA 313 >UniRef50_B8GZF8 Transcriptional regulator, AraC family n=2 Tax=Caulobacter vibrioides RepID=B8GZF8_CAUCN Length = 312 Score = 232 bits (592), Expect = 1e-59, Method: Composition-based stats. Identities = 69/298 (23%), Positives = 117/298 (39%), Gaps = 9/298 (3%) Query: 9 FQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDD 68 W + + N E + G +D G+ L+ V +S + R Sbjct: 17 LDAWNALVASTFDNLVVDADREAFEGSIDVRDLGGMDLARVASSAAVVRRGRASWTRRP- 75 Query: 69 AWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQ 128 +F Q G+++ QD R+ + GD+ L D +RP ++ + + ++ + L +P L Sbjct: 76 -YFKLHLQDVGRSLNSQDGREAVLDEGDLMLCDPARPYTIRFDDPNRMLVLRIPSERLAD 134 Query: 129 YFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPVLHQRE 188 + +C RL D L ++ N A+Q L + Sbjct: 135 RMDDPEALCGRRLAGDSLAGALLTSFIRTLWTNAGRGCAPVGEAVQDAALSLLSAAAREG 194 Query: 189 SVQPRRERQF-------QKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVV 241 + R ++ IDDN+ + L +AG G+S R + +FA Sbjct: 195 EGEAPAPRDLDASHGAGARIKRFIDDNLCDPELSVGRVAGALGVSPRYVQMVFAGMATTP 254 Query: 242 AQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRK 299 YIR +RL+ A A+R + + F GF+D SHFS FK +G+ P E+R Sbjct: 255 LAYIRRKRLERAARALREDGVGCNITDLSFGLGFNDLSHFSRAFKAFYGVGPREFRAS 312 >UniRef50_Q28KV9 Transcriptional regulator, AraC family n=1 Tax=Jannaschia sp. CCS1 RepID=Q28KV9_JANSC Length = 337 Score = 231 bits (591), Expect = 2e-59, Method: Composition-based stats. Identities = 71/303 (23%), Positives = 133/303 (43%), Gaps = 8/303 (2%) Query: 5 VDNEFQQWLSQINQVCGNFTGRLLT-ERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEV 63 + W +++ L TG + + + S V + + RT + + Sbjct: 12 PVRRVEAWQDIVSRTFVTLACDLPDKTDVTGSIASIGNGPISASLVDSVAQTVDRTRRLI 71 Query: 64 KGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPR 123 + D FQ+ G+ +++Q +RQV++ GD T+ D++ P L ++E Q+ L +PR Sbjct: 72 RQDDAEVALISFQIEGECLLQQRDRQVRLRPGDFTIYDSTSPYDLQFEEDFCQLVLHMPR 131 Query: 124 TLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESM-NNPALSETESEAALQAMVCLLRP 182 LL + + ICA+R +D + L++ +L +E ++ + L+ Sbjct: 132 DLLRRRLGPVRQICAQRFGSDTGANSFAGAYLKQIALQLTSLETATAEHHIKTALDLVGY 191 Query: 183 VLHQR-----ESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADK 237 + Q V+ + ++V +I + R++ L +A G+S R L + A+ Sbjct: 192 AVEQNVQPCGHDVRRQSAAIREQVAQVISKHFRDDQLSTPSLARAVGISSRRLQEVCAEV 251 Query: 238 GLVVAQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEY 296 G I + RL+ +D +R A + I F GF D S FS +K +G+TP E Sbjct: 252 GTTPMNAIWDIRLEKASDMLRSPAFAHLSITDICFACGFGDSSQFSRRYKTMYGVTPRED 311 Query: 297 RRK 299 R+ Sbjct: 312 RKS 314 >UniRef50_B2HDE9 Transcriptional regulatory protein n=1 Tax=Mycobacterium marinum M RepID=B2HDE9_MYCMM Length = 356 Score = 231 bits (590), Expect = 2e-59, Method: Composition-based stats. Identities = 64/304 (21%), Positives = 121/304 (39%), Gaps = 10/304 (3%) Query: 7 NEFQQWLSQINQVCGNFTGRLLT-ERYTGVLDTHFAKGLKLSTVT-TSGVNLSRTWQEVK 64 F+ + I+Q + + G + + ++LS V + V + RT + + Sbjct: 41 ERFEAFQHAISQTFVPLALCVDDVGTFRGQVRSASLGTVQLSDVRVGNDVLVRRTAKLIN 100 Query: 65 GSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRT 124 S + L+G+ ++ QD + + D + D +RP SL + + + + ++ PR Sbjct: 101 HSAPDYLKVAMPLNGKCVVTQDGHEETLAPRDFAVYDTTRPYSLAFSGAYRALVIMFPRD 160 Query: 125 LLEQYFPHQKPICAERLDADLPMVQLSHRLLQESM-----NNPALSETESEAALQAMVCL 179 + + A RL+ + L E N A + ++A L + Sbjct: 161 QVRLSSAELTRLTARRLNGRDGLGAPVSAFLAEMGNRLDDANTAGTLYLADAVLDMLAAS 220 Query: 180 LRPVLHQRESVQPRR--ERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADK 237 L R ++ I+ + + L IA +SVR L ++F + Sbjct: 221 FAAQLSDETGGNAARGTRGLALRIRAFIESRLGDPGLDVSTIAAAHHVSVRYLQKLFESQ 280 Query: 238 GLVVAQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEY 296 G V +IR+RR++ C + + ++ I WG + SHFS +FK G +P EY Sbjct: 281 GQTVTGWIRDRRIEHCRRDLEDHRLAEVPVSSIAARWGLVNASHFSRLFKAVHGSSPAEY 340 Query: 297 RRKF 300 R + Sbjct: 341 RAQV 344 >UniRef50_B9K0H9 AraC-type DNA-binding domain-containing protein n=1 Tax=Agrobacterium vitis S4 RepID=B9K0H9_AGRVS Length = 311 Score = 231 bits (589), Expect = 3e-59, Method: Composition-based stats. Identities = 69/305 (22%), Positives = 128/305 (41%), Gaps = 8/305 (2%) Query: 2 NPAVDNEFQQWLSQINQVCGNFTGRLLTE-RYTGVLDTHFAKGLKLSTVTTSGVNLSRTW 60 + F W + + L E R+ G + + + ++T+++S + R Sbjct: 8 EMPERDRFPYWREVLCEAYIALNPILEGEQRFKGEVKANLLDCINVTTISSSRQKIHRRR 67 Query: 61 QEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLY-WQESSKQISL 119 ++ ++ Q+ GQ M Q R+ + GD +L+D++ P + Q S Sbjct: 68 LDISRMPHEVYFLNLQVKGQCRMMQGSREALLEPGDFSLVDSTEPYLNDYCSDDWTQYSF 127 Query: 120 LLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCL 179 +PR +L+ A R + P+ ++ L+ N T S +V L Sbjct: 128 RIPRAMLKPLLKQADKQTAIRFTSAHPIASVAIDYLKSVAQNAEHIGTASTPIANHIVDL 187 Query: 180 LRPVLH-----QRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMF 234 + + + R + + V+ I + + L P A +SVR ++R+ Sbjct: 188 VAMAAGVSTTEEDRARGTLRSQLSRSVIQFIGAHAADPTLTPAKAAQHFKISVRYVHRLL 247 Query: 235 ADKGLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPG 294 + G ++ + RRL+ CAD +R A ++ I F WGF+D SHFS F+ FG+ P Sbjct: 248 EESGETFSRLLLKRRLERCADDLR-AEAAISISEIAFRWGFNDLSHFSKTFRHHFGVAPR 306 Query: 295 EYRRK 299 +YR + Sbjct: 307 DYRGQ 311 >UniRef50_A1R5Y4 Transcriptional regulator, AraC family n=1 Tax=Arthrobacter aurescens TC1 RepID=A1R5Y4_ARTAT Length = 328 Score = 231 bits (589), Expect = 3e-59, Method: Composition-based stats. Identities = 78/300 (26%), Positives = 129/300 (43%), Gaps = 5/300 (1%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLLTER--YTGVLDTHFAKGLKLSTVTTSGVNLSRTWQ 61 + N W ++ + R G + + L+ V S ++ RT Sbjct: 11 SPRNSVSFWTEAVSDTFVVLDCKAGDGRESIDGEIAVQTLASIDLARVRASAQSVHRTPA 70 Query: 62 EVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLL 121 + S D ++ Q G ++ QD R + G L D +RP SL + +Q+ + L Sbjct: 71 AIDASSDDYYLVGMQTEGSCLVTQDGRSAALHDGGFALYDTTRPYSLLLTDHFEQLVIRL 130 Query: 122 PRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN-PALSETESEAALQAMVCLL 180 PRT LE+Y P + A ++AD +L +Q N+ LS + + Q + L+ Sbjct: 131 PRTALERYLPEAARLTALAVNADPGAGRLLVNTVQFLANDIDVLSPDVALSVSQGVEHLI 190 Query: 181 RPVLHQRESVQPRRERQFQK--VVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKG 238 L P R ++ V T I +N+ +E L + IA + +S S++R FA G Sbjct: 191 VAGLGGLTRGVPDAHRISRRKLVQTHILENLGDESLSIKSIASDLHLSPSSIHRAFAADG 250 Query: 239 LVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRR 298 V ++ +RL + + + L + WGFSD SHFS F+QR+G P + R Sbjct: 251 ETVMGWVWQQRLKSIRETLLTGRYEGTLTDLFLTWGFSDPSHFSRAFRQRYGHAPSQLLR 310 >UniRef50_Q89GD7 Transcriptional regulatory protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89GD7_BRAJA Length = 331 Score = 230 bits (588), Expect = 3e-59, Method: Composition-based stats. Identities = 72/304 (23%), Positives = 126/304 (41%), Gaps = 9/304 (2%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLLTER-YTGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 F W +++ + RL+ E + + GL L + S R+ + Sbjct: 22 PPRERFDYWHDVVSRNLVDLDFRLVGEAQFDASFHSTPINGLDLCRIKASPHVAQRSTEG 81 Query: 63 VKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLP 122 + +D + F LSG + EQD R + GD L DA+RP L QE+ + S+ +P Sbjct: 82 ILRADHSMLVFNFVLSGSLVAEQDGRLAHLKPGDGALCDATRPYKLSSQEAFELASIRVP 141 Query: 123 RTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAAL-------QA 175 R PH + A L + + L ++ + + Sbjct: 142 REQCIGRIPHLNRLSACNLGERSELAPMVFGYLSHLVDRAPHLTSRAAGLKISQNFKDLL 201 Query: 176 MVCLLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFA 235 + L S+ R ++ ++ N+ + L P IA E +S R + ++ Sbjct: 202 LALLAELADSCASSLTEYRSLALMRIKETVERNVHDPDLTPSTIAAELKLSARYINQLLE 261 Query: 236 DKGLVVAQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPG 294 +G +++YI +RRL+ CA+ ++ A ++ I GF+D SHFS F+ +FGM P Sbjct: 262 TEGTSLSRYIWSRRLNRCAEQLKDPALRARGVSQIAMDNGFNDLSHFSKAFRIKFGMAPR 321 Query: 295 EYRR 298 +YR Sbjct: 322 DYRN 325 >UniRef50_B9K5S9 AraC-type DNA-binding domain-containing protein n=1 Tax=Agrobacterium vitis S4 RepID=B9K5S9_AGRVS Length = 288 Score = 230 bits (588), Expect = 4e-59, Method: Composition-based stats. Identities = 63/291 (21%), Positives = 126/291 (43%), Gaps = 11/291 (3%) Query: 16 INQVCGNFTGRLLTE-RYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTV 74 + V ++ + G + H + +S + + ++RT ++ +A+ + Sbjct: 1 MCNVYVALDPETPSKMDFRGAVTDHPFDEIGISNIASLKQTIARTTSGIRRDTNAYCFLN 60 Query: 75 FQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQES-SKQISLLLPRTLLEQYFPHQ 133 Q++G + Q R G+ T++D+S P L + +Q + +P+ + + + H+ Sbjct: 61 LQVAGTCRIRQGNRDAITMPGEFTVVDSSEPFLLDYTSDTWEQYAFKIPKHMFDSHVGHE 120 Query: 134 KPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPVLHQRESVQPR 193 A + P+ ++ L NP S + ++ L+ L + Sbjct: 121 --FVARTVTDRTPIGKVVVDFLASIARNPENLRHSSINMTKTIIDLVAMSLRASTPERDD 178 Query: 194 ------RERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRN 247 R Q V+ ++ N + + P +A G+S R L+++ + G + Q I Sbjct: 179 DRRRTFRSPLRQSVLRYVELNFADPEISPAKVAAHFGISTRYLHKLLEEHGETLGQIILA 238 Query: 248 RRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRR 298 +RLD CA +R ++ F WGF+D S+FS F++RFG+ P +YRR Sbjct: 239 KRLDRCASELRKGTC-LTISEAAFRWGFNDMSYFSRAFRRRFGVAPRDYRR 288 >UniRef50_B5S3I4 Probable transcription regulator sugar transport system, abc transporter permease protein n=1 Tax=Ralstonia solanacearum RepID=B5S3I4_RALSO Length = 335 Score = 230 bits (587), Expect = 5e-59, Method: Composition-based stats. Identities = 70/315 (22%), Positives = 124/315 (39%), Gaps = 18/315 (5%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLLTE-RYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 A N W I + ++ + ++G L + L ++ V R +E Sbjct: 11 AASNSVAYWTEVICGMQAPVQTHVIGDTPFSGRLAVERLGAVLLCHFRSTPVRYVRGQRE 70 Query: 63 VKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLP 122 + F L+G+AI+ QD ++V GDI L D +RP QI L +P Sbjct: 71 IDRDPGDAFGASLTLTGRAIIAQDGKEVVQHPGDIVLFDTTRPFDYVLPSGDDQIVLDIP 130 Query: 123 RTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPA-------LSETESEAALQA 175 R LL+ P+ L + L ++L++ + + Sbjct: 131 RALLQSCLPNADAFLCTVLSGGSKLGGLVGQMLRDVGTDGPRAGGAGGADAAVAARLGTT 190 Query: 176 MVCLLRPVLHQRE------SVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRS 229 +V LL + P R +KV + D + + L IA + +SVR+ Sbjct: 191 VVHLLATAFEVESDSGKSVPLPPAGPRTLEKVKAFMRDCLSDPGLDIAAIARDNHVSVRA 250 Query: 230 LYRMFADKGLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRF 289 L+R+FA +G +++ +RL ++ ++ + GF++ SHFS F++ F Sbjct: 251 LHRLFAAEGTTAMRWLWQQRLLAGYQSLAAGRGHR-VSEVALMCGFTNFSHFSRAFRRAF 309 Query: 290 GMTPGEY---RRKFR 301 GM P + R + R Sbjct: 310 GMPPTDLLRPRAQRR 324 >UniRef50_A1VU02 Transcriptional regulator, AraC family n=4 Tax=Comamonadaceae RepID=A1VU02_POLNA Length = 340 Score = 230 bits (586), Expect = 6e-59, Method: Composition-based stats. Identities = 63/301 (20%), Positives = 128/301 (42%), Gaps = 6/301 (1%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLLTER-YTGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 A W ++ + G L + + G + T A + ++ + + + R+ Sbjct: 13 ASTERALAWEHWMSGLFGGLDSDLYGDSVFDGHIATSHAGDVVMTRLEANRHRVMRSPGL 72 Query: 63 VKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLP 122 + SD ++ + G A +EQ RQ + G + D + + E S + ++LP Sbjct: 73 ARTSDMSYLKIIAPWQGNAALEQQGRQTWVRPGGWAIYDTTGSYEVANPERSLHLIVMLP 132 Query: 123 RTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN-PALSETESEAALQAMVCLLR 181 R L + + + + +++ ++ P ++ + A ++ L+R Sbjct: 133 REQLTERGLRIDALMGRLVGGSSGISRVALETMRSIFQELPLMTPEAARGAGDLVIDLVR 192 Query: 182 PVLHQ---RESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKG 238 L + R + ++E ++ I ++R+ L + IA S R L+ FAD+ Sbjct: 193 LSLQELAGRTTATTQQEALKDRIRDFIGQHLRDPDLSLDRIAQVLNCSKRHLHNAFADEE 252 Query: 239 LVVAQYIRNRRLDFCADAIRHA-ADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 + YI RRL C +++ + I F WGF++ +HFS VF++ G++P E+R Sbjct: 253 DTLGHYILRRRLQACMRDLKNPVHLPRTITDIAFSWGFNNGTHFSRVFREHAGLSPSEFR 312 Query: 298 R 298 R Sbjct: 313 R 313 >UniRef50_C1AVG9 Putative AraC family transcriptional regulator n=1 Tax=Rhodococcus opacus B4 RepID=C1AVG9_RHOOB Length = 326 Score = 229 bits (585), Expect = 8e-59, Method: Composition-based stats. Identities = 67/313 (21%), Positives = 121/313 (38%), Gaps = 17/313 (5%) Query: 2 NPAVDNEFQ------QWLSQINQVCGNFTG--RLLTERYTGVLDTHFAKGLKLSTVTTSG 53 P + W + + + R+ L T L LSTV Sbjct: 16 TPPPPARQEMSGGREWWTDALAETYCEMDPQWESRSGRFEARLSTRQFGDLSLSTVRAHA 75 Query: 54 VNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQES 113 ++ RT + +D ++ G +EQ +R + + G ++DA +P + + Sbjct: 76 HSVLRTPAMIGDTDSEDYFLCAVTGGPGRIEQHDRSIWLDKGSFAVIDAGQPFRFDFPQR 135 Query: 114 SKQISLLLPRTLLEQYF--PHQKPICAERLDADLPMVQLSHRLLQESMN-----NPALSE 166 +QI + +PR LL + A+ + A + R LQ+ A + Sbjct: 136 FEQIVVRVPRPLLLGRMSERDVDRVMAQPVSAASGAGVVVSRFLQQLAALDAAVPDAPAA 195 Query: 167 TESEAALQAMVCLLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMS 226 S +AL +V L Q + L+ + +E L A E G+S Sbjct: 196 ALSASALDMIVTALADTGGTVSPTQQAHTADLHRAQNLLKTRLHDENLSITEAAAELGIS 255 Query: 227 VRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFK 286 +R L ++F G ++++ + RL+ + D + + GF D SHFS F+ Sbjct: 256 LRYLQKIFQSTGSTPSEWLLHARLERARMILLST--DITIGDLASRVGFKDISHFSRSFR 313 Query: 287 QRFGMTPGEYRRK 299 +G++PG+YRR+ Sbjct: 314 TLYGISPGQYRRR 326 >UniRef50_Q13VV6 Transcriptional regulator, AraC family n=2 Tax=Proteobacteria RepID=Q13VV6_BURXL Length = 305 Score = 228 bits (583), Expect = 1e-58, Method: Composition-based stats. Identities = 72/299 (24%), Positives = 123/299 (41%), Gaps = 7/299 (2%) Query: 6 DNEFQQWLSQINQVCGNFTGRLLTER-YTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVK 64 + W ++ + + + L +L+ V S ++RT ++ Sbjct: 2 ADRLPYWNEVVSSTFIPSSVQPPRAGEFRASLHNERLGEAELTVVRASPQRVARTSALIR 61 Query: 65 GSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRT 124 S D F + + Q R VQ+ L D++ P L + E L LP Sbjct: 62 LSSDECLMFGFAPKARWKVSQHGRTVQVAPMQFVLYDSNYPFELEFDEDFDLHVLQLPHA 121 Query: 125 LLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRP-- 182 L + DA +L L++E + S + +L ++ L Sbjct: 122 SLAFAGSRLSDVAGRPFDAVSGAGKLLASLIEEVRSGHTSSGVIARTSLGSVAVHLATSM 181 Query: 183 ---VLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGL 239 +L R RE + +V + I+ N+ L P IA GMSVR+L+ +F+ + L Sbjct: 182 VSELLELRTDEANERELRLLRVKSYIELNLANPRLDPHAIASANGMSVRTLHGLFSAEEL 241 Query: 240 VVAQYIRNRRLDFCADAIRHA-ADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 V+ Y+ +RRL C + + +A +AGI WGF + ++FS FK+ FG++P YR Sbjct: 242 GVSTYVTHRRLLRCKEDLGNAMHSSLSVAGIAMRWGFWNNAYFSRAFKRMFGISPRSYR 300 >UniRef50_B0RKH8 AraC family transcription regulator protein n=1 Tax=Herbaspirillum seropedicae RepID=B0RKH8_HERSE Length = 350 Score = 228 bits (583), Expect = 1e-58, Method: Composition-based stats. Identities = 71/303 (23%), Positives = 128/303 (42%), Gaps = 11/303 (3%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLLTE----RYTGVLDTHFAKGLKLSTVTTSGVNLSRT 59 A + F W + + + L + + G + + + V + ++ R Sbjct: 10 AQNERFSYWREVLCEAFVSLNPILNEKHTVIDFAGEVSSRSLSTTAQTRVFSKAQHIQRR 69 Query: 60 WQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISL 119 +E++ + + + FQL G ++ QD ++ + GD +++D++RP L +Q +S Sbjct: 70 GEEIRRNPVEYCFANFQLEGSCVVRQDGQESMVLPGDFSIVDSTRPYFLDYQGDWHVLSF 129 Query: 120 LLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNP-ALSETESEAALQAM-- 176 +PR + A R+D M ++ R + + + A+ Sbjct: 130 RIPREQVISRLASPYKATARRVDGKAGMGLVASRFARSLEQVDLDMGSGVQDCLSAALNS 189 Query: 177 ---VCLLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRM 233 + L + Q P RE V T I D++ E L P+ +A +S R+LY + Sbjct: 190 IIAIALGATLEAQERDRLPVREAIRLAVETYIRDHLEEPHLGPDMLASRFKVSRRTLYSL 249 Query: 234 FADKGLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTP 293 F + L V+ IR RL A + + + WGFSD SHFS +FK+RFG+ P Sbjct: 250 FEEAPLSVSSLIRELRLQRSARDLLSPG-HPGVLAVALRWGFSDASHFSRLFKRRFGVCP 308 Query: 294 GEY 296 E+ Sbjct: 309 REF 311 >UniRef50_A5EKU9 Transcriptional regulator, AraC family n=2 Tax=Bradyrhizobium RepID=A5EKU9_BRASB Length = 318 Score = 228 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 64/303 (21%), Positives = 116/303 (38%), Gaps = 8/303 (2%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLL-TERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 QW + V + G + S V + + RT Q Sbjct: 11 PGHRRLAQWQDIVCDVYVGLDCTSDLGSAFRGSVTHTALGRAVCSEVASDRQRVHRTSQR 70 Query: 63 VKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLP 122 + +D + G + QD R I G+ + D +RP L + + +Q LP Sbjct: 71 IARADADYVLIALGREGIGGVVQDGRDTVIRPGEFAIYDTTRPYELQFDAAFRQTVFKLP 130 Query: 123 RTLLEQYFPHQKPICAERLDADLPMVQLSHRL-LQESMNNPALSETESEAALQAMVCLLR 181 R +L++ + + A AD P+ L++ ++ + +E L+ Sbjct: 131 RDMLQRRIGATEAVTAISFGADSPLQPLAYDFIIRLCERADHIGTEHAERLSDQAADLVA 190 Query: 182 PVLHQR-----ESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFAD 236 L +R R ++ + ++ + L A E G+S R + +F+D Sbjct: 191 MTLAERLRTQPLPASSHRAALLYRIKAHVRTHLADPDLSLATAARELGLSARYVNDLFSD 250 Query: 237 KGLVVAQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGE 295 + L +++ RL C + A ++ I WGF+D SHF VF+ +FG++P E Sbjct: 251 EQLSFQRFVLAERLRQCQRDLGMPALAHRHISEIALSWGFNDLSHFGRVFRAQFGLSPRE 310 Query: 296 YRR 298 +RR Sbjct: 311 WRR 313 >UniRef50_Q4ZUB6 Helix-turn-helix, AraC type n=1 Tax=Pseudomonas syringae pv. syringae B728a RepID=Q4ZUB6_PSEU2 Length = 309 Score = 226 bits (577), Expect = 7e-58, Method: Composition-based stats. Identities = 74/298 (24%), Positives = 142/298 (47%), Gaps = 10/298 (3%) Query: 5 VDNEFQQWLSQINQVCGNFTGRLLTE-RYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEV 63 ++ F W ++ G + L E + G L+ + + + +S ++ R Q+ Sbjct: 12 PEDRFDAWQEVVSSTYGLVASQPLNEAPFDGRLNVRGQGSVTFTRIQSSPLHYRRLQQD- 70 Query: 64 KGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPR 123 + F L A++ Q++R+ + GAGDI L D+++P + + E QI L +PR Sbjct: 71 --RESDHFLLTLSLCPDALVVQNDRESRQGAGDIVLYDSAQPYACRYPEGDDQIVLTVPR 128 Query: 124 TLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPV 183 LL Q+ P + + LD + +++ +L E+ N LS+ SE +++ +L Sbjct: 129 KLLLQHIPSAERLVCRTLDGHSALGRVAAVVLTEAWNAEGLSDPLSERLNASLLDVLSTA 188 Query: 184 LHQ-----RESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKG 238 Q + +Q Q++ + +N+ + L E IA T +S R+L R+FA +G Sbjct: 189 FDSVFGDTDIRRQSHQMQQLQRIKQFLLNNLPDTGLTAENIALATHVSPRTLNRLFAREG 248 Query: 239 LVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEY 296 +++ +RL C DA+ +++ ++GF++ SHFS FK +G+ P + Sbjct: 249 TTAIRWLWQQRLSACHDALLK-RHVRRVSDAALNFGFTNLSHFSRAFKNAYGIPPQQL 305 >UniRef50_C5ALA2 Transcriptional regulator, AraC family protein n=1 Tax=Burkholderia glumae BGR1 RepID=C5ALA2_BURGB Length = 344 Score = 225 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 70/306 (22%), Positives = 125/306 (40%), Gaps = 10/306 (3%) Query: 4 AVDNEFQQWLSQINQVCGN-FTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 V + F W ++ + + + G L + + L TS R+ Sbjct: 10 PVSDRFAIWREALSNIFDVSLHQTAPGDTFFGSLTAYHLGPVLLGECRTSAQRYLRSPVM 69 Query: 63 VKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLP 122 ++ D + +SG+ + + +++LD SRP I+LL+P Sbjct: 70 IRRDDIDHYLIQLYISGEIHGLYGSKPTHLTPMTLSVLDMSRPVD-SLGTPLHNINLLIP 128 Query: 123 RTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN-PALSETESEAALQAMVCLLR 181 R LL + +D L+ L P L ++ A + V L+ Sbjct: 129 RDLLAPLIAQPNHMHGRIWTSDAATTALAASHLVTLFRLVPTLDSSQLSAVVDVTVNLIA 188 Query: 182 PVLH----QRESVQPRRERQ-FQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFAD 236 L RE++ P+R+ + V I +IR+ L P ++ G+S LYR+F Sbjct: 189 ICLGSGEQAREALLPQRDAISLRMVRRYIRRHIRDMTLSPASLSTALGISRSRLYRLFKG 248 Query: 237 KGLVVAQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGE 295 +G V +YIR+ R+ I + ++ I + GF++++HFS F+++FGM+P E Sbjct: 249 EGG-VHEYIRSSRMRLALKEISDSKYHHRRIGDIAYEIGFTNEAHFSRSFREKFGMSPKE 307 Query: 296 YRRKFR 301 R R Sbjct: 308 AREGAR 313 >UniRef50_D0XME9 Transcriptional regulator, AraC family n=1 Tax=Brevundimonas subvibrioides ATCC 15264 RepID=D0XME9_9CAUL Length = 317 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 65/304 (21%), Positives = 117/304 (38%), Gaps = 8/304 (2%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLLTER-YTGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 + W + + + L + L+ + ++ RT Sbjct: 10 PAARRSEAWNKLYSSHLNHVDFIPADRSHFNAELSMSRLGPIGLARMAADSSSIERTRHH 69 Query: 63 VKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLP 122 + + V Q G+ + + ++ AGD TL D+S P ++S+ + L +P Sbjct: 70 ITVGSPRLYTFVLQTRGEGELSHCGHEARLEAGDFTLCDSSAPHFFRVNDNSEVLMLRVP 129 Query: 123 RTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPAL------SETESEAALQAM 176 L Y P + C + L ++ + + +++ + L + + L+ M Sbjct: 130 AETLRVYVPSPEVFCGQLLKGNVGLTGTAAAMIRSLASQAELGIPSPYDQRVARNLLEVM 189 Query: 177 VCLLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFAD 236 + + +V I+ N+R+ L P IA +S R L +FA Sbjct: 190 ATSYALAFDDQIQGSSVVRGRQACIVRHIEANLRDPGLSPASIAAALRISPRYLRLVFAT 249 Query: 237 KGLVVAQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGE 295 V+ YI RRL+ CA I+ L + F WGF+ SHF+ F+ RFG+ P + Sbjct: 250 GNETVSGYILRRRLEECARQIQEPGWTGHTLTEVAFSWGFNSSSHFARSFRDRFGVPPRQ 309 Query: 296 YRRK 299 YRR Sbjct: 310 YRRS 313 >UniRef50_C4KLX3 AraC family regulatory protein n=30 Tax=pseudomallei group RepID=C4KLX3_BURPS Length = 319 Score = 224 bits (572), Expect = 3e-57, Method: Composition-based stats. Identities = 73/303 (24%), Positives = 131/303 (43%), Gaps = 7/303 (2%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLLTER-YTGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 + + W + Q G + + L + +++ T+ + R Sbjct: 13 SPAFRGRAWGRVVTQYFGGLDACCDGDDAFDAQLSQYEIGPMRVFTIAAPAHRIVRPVAA 72 Query: 63 VKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLP 122 + +F + QLSG + +EQ + ++ +GD +L D P S+ +Q+++ +P Sbjct: 73 LHDHGSDFFKLILQLSGVSEIEQRGKTFRLHSGDWSLYDPRVPYSIANLTHVEQLAIQIP 132 Query: 123 RTLLEQ-YFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLR 181 R L P + LS L+ S P+L T A + ++ L+ Sbjct: 133 RKQLGGFAVPDLHTSDVREFELKGLFSLLSSFLVSLSEQLPSLPGTTGTALSETILGLIV 192 Query: 182 PVLHQRESVQPRRERQ----FQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADK 237 L + Q +V I ++ + L + IA E S R L+R+F ++ Sbjct: 193 STLTAQRDAQGEHVALPAVLRMRVKQYIHGHLADADLSIDRIARELRCSKRYLHRIFEEE 252 Query: 238 GLVVAQYIRNRRLDFCADAIRHAADDEK-LAGIGFHWGFSDQSHFSTVFKQRFGMTPGEY 296 G+ + +YI + RL+ C DA+ +A + ++ I F WGFS +HF FKQR+GMTP E+ Sbjct: 253 GVTIDRYIWSSRLERCKDALDNARAAKPAISEIAFSWGFSSSAHFCRSFKQRYGMTPREF 312 Query: 297 RRK 299 R+ Sbjct: 313 VRR 315 >UniRef50_Q603U3 Transcriptional regulator, AraC family n=1 Tax=Methylococcus capsulatus RepID=Q603U3_METCA Length = 354 Score = 223 bits (569), Expect = 6e-57, Method: Composition-based stats. Identities = 60/300 (20%), Positives = 115/300 (38%), Gaps = 8/300 (2%) Query: 4 AVDNEFQQWLSQINQVC-GNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 ++ + W I+ + + + L T + L+ + G R Sbjct: 23 PAEDRYSIWKESISVIFDVEREVETGSAPFAATLTTCHLGSMLLADTASVGQCFQRKSPL 82 Query: 63 VKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLP 122 + G ER + GD+ LLD ++P + ++L+LP Sbjct: 83 IARDGLDHCIIQVYQYGTTRGRWGERHSTVQPGDVFLLDLTQPLD-SCASDFRNLTLMLP 141 Query: 123 RTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNP-ALSETESEAALQAMVCLLR 181 R LL + + + L D +L + + LS E++ + +V L+ Sbjct: 142 RDLLAPHLGAPERLHGRSLPRDSARGRLLSQHIATLWEVATTLSSDEAQCIARGLVHLIG 201 Query: 182 PVLHQRESVQPRRER---QFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKG 238 + R E + V I +++ + L PE +A +S LY +F G Sbjct: 202 AYFGAGRVEEDRPETGAVLLETVRRHIGNHLGDPRLTPESLAAYFRVSRSYLYSLFQPLG 261 Query: 239 LVVAQYIRNRRLDFCADAIRHAADD-EKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 + +YI+ +RL + A +++ I + G+ +++HFS F++ FGM+P E R Sbjct: 262 G-ITRYIQQQRLRRAFLELTRPASRPRRVSEIAYRVGYRNEAHFSRSFRRAFGMSPSEAR 320 >UniRef50_C3PKW7 Transcription regulator, AraC family n=2 Tax=Corynebacterium RepID=C3PKW7_CORA7 Length = 306 Score = 222 bits (567), Expect = 9e-57, Method: Composition-based stats. Identities = 63/304 (20%), Positives = 122/304 (40%), Gaps = 8/304 (2%) Query: 1 MNPAVDNEFQ--QWLSQINQVCGNFTGRLLT-ERYTGVLDTHFAKGLKLSTVTTSGVNLS 57 M+ + +F W + ++ G + L + + L + TS ++ Sbjct: 1 MSASAVEQFDIASWRTASSESFGQLDVDAEDPSSFHATLRSTKVGDISLFDMCTSPHTVN 60 Query: 58 RTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQI 117 R+ + + + Q++G + M QD R ++ GD+ L RP +L++ E + Sbjct: 61 RSK--IATDETPFCKLSLQITGSSTMSQDGRTCELRPGDLALYVTQRPYTLHYPEEQNTL 118 Query: 118 SLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPAL--SETESEAALQA 175 + P++ L+ + + A + + ++ L ++ N L + A Sbjct: 119 IVHFPQSFLDISPAQIQRLTANPISRSHGLGAVAVPLFEQLAENLDLLKGPHATALVRSA 178 Query: 176 MVCLLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFA 235 + L+ + F + I+ ++ + L P IA +SVR L+ F+ Sbjct: 179 LTMLVSVLASDVADEPSAGTLLFNQATAYIEQHLGDSDLGPSTIAQALFVSVRHLHAKFS 238 Query: 236 DKGLVVAQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPG 294 ++GL V YIR RRL+ + +E ++ I +G D SH S +FK F P Sbjct: 239 EQGLSVGSYIRTRRLEHIRRELVDPRHSEESISHISARYGLHDPSHLSRIFKAEFHKPPS 298 Query: 295 EYRR 298 YR Sbjct: 299 AYRA 302 >UniRef50_B8ETQ3 Transcriptional regulator, AraC family n=1 Tax=Methylocella silvestris BL2 RepID=B8ETQ3_METSB Length = 330 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 82/305 (26%), Positives = 136/305 (44%), Gaps = 7/305 (2%) Query: 2 NPAVDNEFQQWLSQINQVCGNFTGRLLT-ERYTGVLDTHFAKGLKLSTVTTSGVNLSRTW 60 + A I + N T + + L + +LS + +S V L R Sbjct: 25 DIAPAERSGWLRDVICREYANVEVTSPTCQILSQDLTIYPWDRSRLSVIRSSAVGLRRLP 84 Query: 61 QEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLL 120 +E + ++ V LSG ++EQ+ ++V + GD+T+ DA+RP ++ ++ L Sbjct: 85 REPLLAGQDAYFVVVLLSGDYVLEQEGKEVVLQPGDMTIYDATRPHKIHCPRDFSKLILA 144 Query: 121 LPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESM-NNPALSETESEAALQAMVCL 179 +PR LL + + A R+ + ++ R LQ N + E A V L Sbjct: 145 IPRLLLRERMAGVEHCAALRIPGSGGIGSVASRFLQSCGKNADEFAPNEILALADQAVDL 204 Query: 180 LRPVLHQRES----VQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFA 235 + + R ++V L+++ + + L IA G+S R L +F Sbjct: 205 VTLAAASVRPGGFSLSRSRALSMRRVKALVEERLADLELDTAKIARLAGLSARYLNGLFG 264 Query: 236 DKGLVVAQYIRNRRLDFCADAIRHAAD-DEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPG 294 D+G + +Y+ +RRL+ CA + L+ I F WGFSD SHFS FKQRFG P Sbjct: 265 DEGTSIMRYVWSRRLENCAKDFSDPRRAGDPLSEIAFRWGFSDASHFSRAFKQRFGCAPR 324 Query: 295 EYRRK 299 E+RR+ Sbjct: 325 EFRRR 329 >UniRef50_C8Q8U1 Transcriptional regulator, AraC family n=1 Tax=Pantoea sp. At-9b RepID=C8Q8U1_9ENTR Length = 311 Score = 221 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 62/300 (20%), Positives = 124/300 (41%), Gaps = 6/300 (2%) Query: 6 DNEFQQWLSQINQVCGNFTGR-LLTERYTGVLDTHFAKGLKLS-TVTTSGVNLSRTWQEV 63 + F W + N R ++G + ++ ++ + + RT + + Sbjct: 13 RHRFDAWRDAVCSRLINAEARQTHAGEFSGSFGYSMLGHVDIANHISRTALVWQRTQECI 72 Query: 64 KGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPR 123 + + FY + +G + Q++ + AGD+ + DA+ P E+ + LPR Sbjct: 73 RRHPNHDFYLGYICAGSGTLSQNDNHSCVSAGDVVIYDAATPFDFAM-ENVAINIVHLPR 131 Query: 124 TLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSET--ESEAALQAMVCLLR 181 ++E+ P + + LD P + ++L E+ A E +E ++ ++ Sbjct: 132 QMIEKEAPSIARLAGKTLDLSRPGMTSLKQMLTEAFAFNAERENAFLTEQFANTLLNMIA 191 Query: 182 PVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVV 241 L+ ++S + + +VV+ + N+ E L IA +S R++ R+FA G Sbjct: 192 VSLNLQKSDAALKPDLYSRVVSYLRLNLHEHDLSVAQIANAHHVSPRTVSRVFAAHGTTP 251 Query: 242 AQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKFR 301 ++ RL + + + GFSD SHFS F++ FG TP R+ + Sbjct: 252 MNFVWQERLLASHKVLAEGKA-RNVTQVAMDHGFSDMSHFSLAFRKAFGYTPSSLIRQPQ 310 >UniRef50_C8Q6A0 Transcriptional regulator, AraC family n=1 Tax=Pantoea sp. At-9b RepID=C8Q6A0_9ENTR Length = 314 Score = 221 bits (563), Expect = 3e-56, Method: Composition-based stats. Identities = 57/299 (19%), Positives = 113/299 (37%), Gaps = 5/299 (1%) Query: 6 DNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKG 65 + W I++ + GV+ + L+LS V+ S N+ R + Sbjct: 12 AERSEYWRHAISRTFVPLESTFSGDDRYGVIRSGNWGDLRLSEVSCSAQNVIRCRRGADN 71 Query: 66 SDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTL 125 D F G+ + Q +G G+ L D P L+ ++Q + +P Sbjct: 72 HPDNAMLLSFISQGKTSVIQAGSHACLGQGEFGLYDTRFPYELHLHGETRQHVVQIPIEH 131 Query: 126 LEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAAL-QAMVCLLRPVL 184 L + + + A + + LL M P + L + + LL ++ Sbjct: 132 LRKEMGKTEHLVAYSFGRKHSLTPFLYVLLNNLMAQPEDIAYRHTSVLYRQFLELLTVIV 191 Query: 185 HQR---ESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVV 241 + +V +ID + + L +A +S R L + G Sbjct: 192 SDECIAKRSSRSSAGLLLQVKIMIDRQLSDTTLSVSSVAESFRISPRYLSMLLKGDGTTF 251 Query: 242 AQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRK 299 +Y+ +RL+ + A++ + ++ I + GF+D ++FS F+++F +P EYR + Sbjct: 252 GRYVLTQRLNKASLALQSPLYSNIPISQIAWELGFNDMAYFSRAFRKKFSCSPTEYRHQ 310 >UniRef50_C6QDE9 Transcriptional regulator, AraC family n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QDE9_9RHIZ Length = 326 Score = 220 bits (562), Expect = 4e-56, Method: Composition-based stats. Identities = 66/304 (21%), Positives = 124/304 (40%), Gaps = 8/304 (2%) Query: 5 VDNEFQQWLSQINQVCGNFTGRLLT-ERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEV 63 + F W + F R + G + G L+ + +G++ RT +++ Sbjct: 18 PRDRFDYWHEAACKAMVPFDCRPRDLSTFEGEITALPFAGAFLTIASNNGLSTWRTSRQL 77 Query: 64 KGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPR 123 S + Q+SG + Q+ R V + AGD+TL+D + + K+ L + R Sbjct: 78 AQSK-NSVFICAQISGSTRISQNGRDVVLKAGDLTLVDNAAASTFECSTGCKEFLLEIER 136 Query: 124 TLLEQYFPHQKPICAERLDADLPMVQLSHRLLQES-MNNPALSETESEAALQAMVCLLRP 182 E + R+D L +Q + LS+T + + L+ Sbjct: 137 RNCEARLGRIGQLTTRRIDGSSGAGALVSNFIQLLPVQLALLSDTAQKQISYQLTDLVAL 196 Query: 183 VLHQRESVQPRRER----QFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKG 238 L + + R ++ ++D N+ + + +A G+SVR ++ + Sbjct: 197 ALTEGDGRSTARSSGRLISLLRLRAVVDANLTNPNVTCDELAAAAGISVRYANQLLEAEE 256 Query: 239 LVVAQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 + + + RRL+ C DA+ A +++ I + WGF D SHF +FK G+TP YR Sbjct: 257 TSLQRLLFTRRLEKCQDALSDPAQAHRQISDIAYSWGFGDVSHFGRLFKSTTGLTPRSYR 316 Query: 298 RKFR 301 + + Sbjct: 317 VQAQ 320 >UniRef50_C0ATQ8 Putative uncharacterized protein n=1 Tax=Proteus penneri ATCC 35198 RepID=C0ATQ8_9ENTR Length = 321 Score = 220 bits (562), Expect = 4e-56, Method: Composition-based stats. Identities = 58/306 (18%), Positives = 114/306 (37%), Gaps = 11/306 (3%) Query: 4 AVDNEFQQWLSQINQVCGNF----TGRLLTE-RYTGVLDTHFAKGLKLSTVTTSGVNLSR 58 + F + I + L R+ + ++ + ++G S Sbjct: 11 PDVDRFSVFRDTIKDRFLSSYECNEVELPPHSRFYANIVEQKVTNIRFIQLESNGHWASS 70 Query: 59 TWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQIS 118 K S + F Q SG + + QD R + GD + D +RP S + Sbjct: 71 RPLSHKLSLEEHFQIEIQRSGTSHLTQDGRTAFLRQGDFCIFDMARPVSWSFDNDYSLFK 130 Query: 119 LLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMN-NPALSETESEAALQAMV 177 +L+PR L + + + A + + L + + + ++ ++ ++ Sbjct: 131 ILIPREKLASRLGNTQNLTARAIRGNSITGSLVYSFVMRYIPFLDSMPPQHAQQLADILL 190 Query: 178 CLLRPVLH----QRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRM 233 L+ R F ++ ++ + L A G+SVR L + Sbjct: 191 NLITSAFSEFSIATPPQSLGRSTLFYFAQHYLEQHLSDPDLSVNECANACGISVRYLQML 250 Query: 234 FADKGLVVAQYIRNRRLDFCADAIRHA-ADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMT 292 F ++ V ++I +RL+ A+ + ++ + + + GFSD S+ S FK F MT Sbjct: 251 FKEQNTSVLRWIYQKRLENYKAALVNPLLAEKNITQLAYECGFSDISNLSRKFKSEFFMT 310 Query: 293 PGEYRR 298 P EYR+ Sbjct: 311 PSEYRK 316 >UniRef50_C5CWJ0 Transcriptional regulator, AraC family n=1 Tax=Variovorax paradoxus S110 RepID=C5CWJ0_VARPS Length = 305 Score = 220 bits (561), Expect = 5e-56, Method: Composition-based stats. Identities = 64/296 (21%), Positives = 121/296 (40%), Gaps = 8/296 (2%) Query: 10 QQWLSQINQVCGNFTGRL-LTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDD 68 W + Q C + + + + L T+ +R +++ + Sbjct: 11 DHWHDVVCQYCIPAASQTVHRQNFDAAVTGRSVGALDAVTLVAPEHTWTRDTADIRRGPE 70 Query: 69 AWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQ 128 + + SG +EQ+ GDI L DA+RP + ++ +PR LL + Sbjct: 71 SSLWLSLMESGVGYVEQNGNSTVQNTGDIVLYDAARPWKYRLNMQT-FYTVRIPRDLLTR 129 Query: 129 YFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESE--AALQAMVCLLRPVLHQ 186 P + A L A + L++E N AL+ + +++ LL V+ Sbjct: 130 RSPAAERFVATSLGAGTGFRPVLGSLIKELRENSALASAPAAATHVTTSLLELLACVIDL 189 Query: 187 RESVQPRR---ERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQ 243 P + + +++ + +I + L +A +S+R+L R+FA G + Sbjct: 190 HAGNGPSQSVTDALYKRACAYVMQHIEDPELSIASVAKSERISLRTLARVFAANGTTPMR 249 Query: 244 YIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRK 299 YI +RL+ A+ + K++ ++GFSD SHFS FK+ FG++P + Sbjct: 250 YIWQKRLEASYCAMAQGSV-RKVSEAAMNYGFSDLSHFSRAFKKAFGVSPQAVMHR 304 >UniRef50_UPI0001B4CF93 AraC family transcription regulator n=1 Tax=Streptomyces hygroscopicus ATCC 53653 RepID=UPI0001B4CF93 Length = 367 Score = 220 bits (561), Expect = 6e-56, Method: Composition-based stats. Identities = 62/316 (19%), Positives = 111/316 (35%), Gaps = 19/316 (6%) Query: 2 NPAVDNEFQQWLSQINQVCGNFTGRLLTE-RYTGVLDTHFAKGLKLSTVTTSGVNLSRTW 60 + F W + ++ R E + + + +S + + RT Sbjct: 10 DIPPSERFAAWRALCDRTTIPMELRSTDEGDFRATMWGVNLGQVMVSGTSVPSLWNHRTP 69 Query: 61 QEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCS-LYWQESSKQISL 119 ++ SD ++ LSG+ + +GA L S P + + +++ Sbjct: 70 VHIRRSDPELYHLQLHLSGETDVRHAGATTTLGARQFMLSCTSGPYEAFVGRGRTDTMTV 129 Query: 120 LLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMN-----NPALSETESEAALQ 174 +P +LL + RL + L +L PA + Sbjct: 130 AVPPSLLPFPAADLGRLLGRRLSGRTGIGALLADVLVRLGAEHTAYRPADGPRLGTVVVD 189 Query: 175 AMVCLLRPVLHQRE-----------SVQPRRERQFQKVVTLIDDNIREEILRPEWIAGET 223 + LL L + + R ++ N+ L P IA Sbjct: 190 LLTALLAHELDGDAEAGAGTTAGRMAPESHRRALVLRIQDFAQRNLHTPDLTPSSIAAAH 249 Query: 224 GMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFS 282 +SVR L+R+F +G VA +IR +RL+ C + A + I WGFS + FS Sbjct: 250 HISVRYLHRLFERQGHTVAAWIRAQRLERCCRDLADPAQSGLPIHAIAARWGFSHAADFS 309 Query: 283 TVFKQRFGMTPGEYRR 298 F+ +G+ P ++RR Sbjct: 310 RAFRGAYGIPPRDFRR 325 >UniRef50_Q140Z5 Transcriptional regulator, AraC family n=2 Tax=Burkholderiales RepID=Q140Z5_BURXL Length = 336 Score = 219 bits (559), Expect = 9e-56, Method: Composition-based stats. Identities = 59/303 (19%), Positives = 130/303 (42%), Gaps = 6/303 (1%) Query: 2 NPAVDNEFQQWLSQINQVCGNFTGRLL-TERYTGVLDTHFAKGLKLSTVTTSGVNLSRTW 60 + + + W S ++ + + + H G ++ RT Sbjct: 23 DVPLGDRTDAWESVLSTSYREWQVPHRLPATFYAHVKQHDFAGAEIVETVCDPCMGQRTA 82 Query: 61 QEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLL 120 V+ D+ + +G+ + V++ +GD+ + + E +++L+ Sbjct: 83 GHVRHDDELYVGVQLTTAGRERFRIGDAGVEVASGDVVVWTTGQAVEFEVLERLHKVTLM 142 Query: 121 LPRTLLEQYFPHQ-KPICAERLDADLPMVQLSH-RLLQESMNNPALSETESEAALQAMVC 178 +P +++ + P + +P ++++ + + L LL S L E+ + ++ + Sbjct: 143 IPWSVMRERLPERKQPPTGGKIESRMGVGSLLAVHLLALSNEIATLDESVQGSVNRSTLE 202 Query: 179 LLRPVLHQRESVQ--PRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFAD 236 LL L ++ ++V I ++ E+ L P IA +S+R L+ +F Sbjct: 203 LLGIALSGQQPCATFDASVAMLRRVQDFILQHLHEDDLNPTRIAEANHISLRYLHMLFQR 262 Query: 237 KGLVVAQYIRNRRLDFCADAIRHAADDE-KLAGIGFHWGFSDQSHFSTVFKQRFGMTPGE 295 + V+ +I +RRL C A+ A + +++ I F WGF+ SHF F++++G +PG+ Sbjct: 263 SDMTVSGWILDRRLHACKQALMDPAYNRQRISEIAFRWGFNSTSHFCRAFREKYGASPGD 322 Query: 296 YRR 298 RR Sbjct: 323 VRR 325 >UniRef50_B2JSH9 Transcriptional regulator, AraC family n=1 Tax=Burkholderia phymatum STM815 RepID=B2JSH9_BURP8 Length = 354 Score = 219 bits (558), Expect = 1e-55, Method: Composition-based stats. Identities = 69/299 (23%), Positives = 126/299 (42%), Gaps = 8/299 (2%) Query: 9 FQQWLSQINQVCGNFTGR-LLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSD 67 F + + + + E ++G ++ H L + + RT +VK Sbjct: 51 FDYFHESVTRHFVPAECKCSTRENFSGEVNGHQVGQLLVGRYSAKQHIWDRTEHDVKTKP 110 Query: 68 DAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLE 127 D + SG M+Q R++ +G GDI L D +RP S I + +PR+L+ Sbjct: 111 DEDIVALLLESGSGKMQQAGRKLVMGVGDIMLFDGARPFRHEVIPDS-IILVRMPRSLIR 169 Query: 128 QYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESE-AALQAMVCLLRPVLHQ 186 +F + ++ + L L++E+ + + A + + L Sbjct: 170 SHFSAVEKFVNMKIADGKSIQPLLSGLMREAYALTEETPLLARIHLANAFINAISVALEI 229 Query: 187 RESVQPRRE----RQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVA 242 + + + F+K +++ID I ++ L IA +S R+L R+FA +G + Sbjct: 230 QSASEVNESYEGRVLFEKALSIIDARIDDQALNVAEIASALHVSDRTLSRIFAREGTTPS 289 Query: 243 QYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKFR 301 Q + NRRL ++ ++ I F GFSD SHFS FK+ FG P + ++ + Sbjct: 290 QTLWNRRLQKSYRLLQE-NVALQVTQIAFQCGFSDLSHFSRSFKRVFGSAPSQILKQRK 347 >UniRef50_A9D6L8 Helix-turn-helix, AraC type n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D6L8_9RHIZ Length = 336 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 68/299 (22%), Positives = 119/299 (39%), Gaps = 7/299 (2%) Query: 6 DNEFQQWLSQINQVCGNFTGRLL-TERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVK 64 + F W + + +TG + + + S V+ S + R +++ Sbjct: 20 RDRFAYWREAVCDTYVQLECMSDNSTDFTGEIQLNRMPRVSTSIVSGSQQLVRRRRRDIA 79 Query: 65 GSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRT 124 + D WF QL +++Q R ++G GD L + P L + +Q+ + +PR Sbjct: 80 KATDEWFLLSIQLERHGLIQQCGRIAELGLGDFALYSSIDPYDLSLPDGFRQLVVQIPRH 139 Query: 125 LLEQYFPHQKPICAERLDADLPMVQLSHR-----LLQESMNNPALSETESEAALQAMVCL 179 L Q P+ + + + L + +S NPA ++ + Sbjct: 140 DLLQRLPNADLLTGMTVRGKSEIGGLVRDSVFRLVQAQSAVNPATRHCLEDSIIDLCATG 199 Query: 180 LRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGL 239 L + R + T+I I + L IA +SVR L +F +G Sbjct: 200 LTTLHGAEAVRTATEHRLIHQADTIIAQRIGDPYLDRAEIAAALSVSVRRLSEVFQAEGT 259 Query: 240 VVAQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 VA IR RL A +R+ ++ I WG ++ HFS +F++RFG++P EYR Sbjct: 260 SVASKIRQLRLAGIASDLRNPQFAGWTISAIAMRWGLNNLQHFSRIFRERFGVSPREYR 318 >UniRef50_A5EP12 Transcriptional regulator, AraC family n=3 Tax=Bradyrhizobium RepID=A5EP12_BRASB Length = 315 Score = 218 bits (555), Expect = 2e-55, Method: Composition-based stats. Identities = 70/295 (23%), Positives = 141/295 (47%), Gaps = 5/295 (1%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRL-LTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 + ++ Q+W + +CG F + G ++ LKL + S ++ T+ Sbjct: 14 SPKSQIQRWSDALTDLCGRFDIDPLEGASFEGRINFTTVSRLKLCQIEASQHRIAHTYAR 73 Query: 63 VKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLP 122 + ++ + +FQ G + EQD RQ++IG GD D S P ++ ++ +++P Sbjct: 74 ARDTEHPYIKILFQTYGVSYFEQDGRQIEIGPGDCLAYDVSSPHTIVSPALTRHDVVIVP 133 Query: 123 RTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPA-LSETESEAALQAMVCLLR 181 + LL++ + + A +L A +++H + + + LS + + ++++ LL Sbjct: 134 KELLQERGFRSEKMPAYKLSARSGTGRIAHDVTHAAFDEATRLSPNSAASVAESLIDLLL 193 Query: 182 PVLHQRESVQPRR--ERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGL 239 L + + + R E + + I +++R+ L + I+ G + R L+ +F+D+G+ Sbjct: 194 LPLREADRMLDRAGPEAVYIRAQAFIREHLRDPDLCIDQISAALGCTKRYLHMVFSDRGM 253 Query: 240 VVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPG 294 V+ YI RL C + + + + F WGFS SHFS VF++ FG+ P Sbjct: 254 TVSDYIWRARLQHCRQEL-ETQSGKTITDVAFSWGFSSSSHFSRVFRKYFGVVPS 307 >UniRef50_A5W3Z7 Transcriptional regulator, AraC family n=5 Tax=Pseudomonadales RepID=A5W3Z7_PSEP1 Length = 313 Score = 218 bits (555), Expect = 3e-55, Method: Composition-based stats. Identities = 71/305 (23%), Positives = 132/305 (43%), Gaps = 6/305 (1%) Query: 1 MNPAVDNEFQQWLSQINQVCGNFTGRLLTER-YTGVLDTHFAKGLKLSTVTTSGVNLSRT 59 + + F W + + C + + ++ + G L + L ++T+++ + R+ Sbjct: 10 LAVSPSRRFDYWREVVCRHCLSADSKPSSQSNFEGALQVNGIGPLDVTTLSSPLHHWVRS 69 Query: 60 WQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISL 119 Q ++ + L G +EQ R+ ++ AG++ L DA++P ++ + Sbjct: 70 EQHLRSDPAEDIWLGVTLDGYGEIEQHNRKARLTAGNVFLYDATQPFRFSL-GGTENHLI 128 Query: 120 LLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETE--SEAALQAMV 177 +PR LL Q PH I A L+ P V +++ ++ ++ L + E S +V Sbjct: 129 RIPRPLLAQRVPHIADITALVLEEGRPGVIPLRQMIGQAASSAPLLQDEGVSRRYSNTIV 188 Query: 178 CLLRPVLHQRESVQPRRE-RQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFAD 236 LL L ++ RE + +++ I ++ E L E IA +S R++ R FA Sbjct: 189 DLLVLSLELQDLKTTHRELDLYGRIMNYIQRHLTEPELSIESIALAHHVSTRTVTRAFAR 248 Query: 237 KGLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEY 296 I RL+ AI ++ +GFSD SHFS F++ FG+ P Sbjct: 249 HQKSPVAEIWKERLNASRAAI-ECGQVRSVSQAALEYGFSDFSHFSHAFRKAFGVAPHSL 307 Query: 297 RRKFR 301 R+ R Sbjct: 308 LRRSR 312 >UniRef50_B5GMZ9 AraC-family transcriptional regulator n=1 Tax=Streptomyces clavuligerus ATCC 27064 RepID=B5GMZ9_STRCL Length = 341 Score = 217 bits (554), Expect = 3e-55, Method: Composition-based stats. Identities = 56/313 (17%), Positives = 115/313 (36%), Gaps = 13/313 (4%) Query: 1 MNPAVDNEFQQWLSQINQVCGNFTG-RLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRT 59 M+ + F W + + + + + T V + R+ Sbjct: 23 MDIPASDRFAYWCDLMGSTHAPLDLLSDHADDFRARQQVFGLGDVVVWPATFPSVIMRRS 82 Query: 60 WQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQ---ESSKQ 116 + ++ SD ++ L+G ++ + + + G G + S+P + + Sbjct: 83 TKLIRQSDPESYHLSLLLNGHGVVTRQDWEADYGPGHFHSQNTSQPVDIQGSSELGRIQI 142 Query: 117 ISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNP-----ALSETESEA 171 I L +P+ LL + + L + L++ N A Sbjct: 143 IGLEVPKELLPLPKRLADRAIGLPMSERHGVGALLGQFLRQVARNAGDYRLADGPRLGGV 202 Query: 172 ALQAMVCLLRPVLHQRESVQPRRERQ--FQKVVTLIDDNIREEILRPEWIAGETGMSVRS 229 A + + L Q ++ P R ++ I+ N+ + L P +A +S Sbjct: 203 AADLVATMFAHALDQENALPPHTHRYTTVLRIKAFIERNLGDPELTPTAVAAAHNISTGH 262 Query: 230 LYRMFADKGLVVAQYIRNRRLDFCADAIRHA-ADDEKLAGIGFHWGFSDQSHFSTVFKQR 288 L+R+F ++G+ VA IR RL+ + E++ + WG + + FS F+ Sbjct: 263 LHRIFREEGITVAALIRRSRLERARAELVDPLRAGERVHTVAARWGLT-AAEFSRSFRAT 321 Query: 289 FGMTPGEYRRKFR 301 +GM+P +YR+ R Sbjct: 322 YGMSPSDYRQLHR 334 >UniRef50_C6Q9S8 Transcriptional regulator, AraC family n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6Q9S8_9RHIZ Length = 346 Score = 217 bits (553), Expect = 5e-55, Method: Composition-based stats. Identities = 53/297 (17%), Positives = 110/297 (37%), Gaps = 6/297 (2%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEV 63 A F + I +T + G +++ + V S + +T + Sbjct: 25 AKAEAFSLFRETICTAFMPWTPEFYGRDFVGRVESIDLANGAIGRVRMSPIVAVKTKSNI 84 Query: 64 KGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSL--YWQESSKQISLLL 121 S + +SG+ ++Q GD+ L ++ P +L ++ ++ Sbjct: 85 SHSPIDCIHGNLIISGELKVDQGGTTNIAKRGDLILYESFSPVTLTERPDAPCDNLAFII 144 Query: 122 PRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLR 181 P + + ++ L+ L + + E A QA V LL Sbjct: 145 PTSSFAHSQDIDHKFSNILVPSEKLSGPLAGCLTMLAQSLCTAPIEEIAALFQACVALLP 204 Query: 182 PVLHQRE---SVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKG 238 + + + +++ I N+ + L P +A + G+SVR L+++F G Sbjct: 205 VAIGAPDCVQHPSVPKNYLLSRILDYIGQNLSDPELSPPRVADQFGISVRYLHKLFVQFG 264 Query: 239 LVVAQYIRNRRLDFCADAIRHAADDE-KLAGIGFHWGFSDQSHFSTVFKQRFGMTPG 294 + ++ RL + ++ ++ + + WGF+D S F FK++FG TP Sbjct: 265 TTFSAHVTAERLKRIKWDLEVSSGRRPSISALAYRWGFNDLSTFHRAFKKQFGCTPS 321 >UniRef50_B2IIE7 Transcriptional regulator, AraC family n=1 Tax=Beijerinckia indica subsp. indica ATCC 9039 RepID=B2IIE7_BEII9 Length = 316 Score = 217 bits (553), Expect = 5e-55, Method: Composition-based stats. Identities = 68/303 (22%), Positives = 128/303 (42%), Gaps = 6/303 (1%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLL-TERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 + W + +CG ++ +R + GL+L + TSG ++ Sbjct: 14 PHSHSINYWEEALAALCGRLQVEIVGDDRIDAFANYVDFDGLRLCQIKTSGHRVALPRSW 73 Query: 63 VKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLP 122 + S+ FQ G +I EQ + ++ + GD D ++P + E ++ ++P Sbjct: 74 LGQSEHPVVKVHFQTKGTSIFEQGQTRIVLSPGDCLAYDVAQPHLISSLEYTEHEVAIIP 133 Query: 123 RTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPA-LSETESEAALQAMVCLLR 181 + L + + A + + ++ L ++ + LS + A++ +L Sbjct: 134 KKSLMERRIAARQFPAVHMSTEHGDIRFVRNFLLSALRQASTLSNKSIKPIADALLDVLI 193 Query: 182 PVL---HQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKG 238 L + RRE + I N+ + L + IA G S R L+ +F D+G Sbjct: 194 IPLSEGRPQGVSSDRRETLRIRAQDYIRQNLGDTDLTIDRIARALGCSKRYLHMIFMDEG 253 Query: 239 LVVAQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 + V+++I N RLD C ++ A ++ + + WGFS SHFS FK R+G TP Sbjct: 254 ITVSRFIWNERLDRCFYDLKDAHQSNKTITEVAIEWGFSSPSHFSRSFKDRYGFTPSTAL 313 Query: 298 RKF 300 ++ Sbjct: 314 KRI 316 >UniRef50_B6R2R9 Transcriptional regulator, AraC family n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R2R9_9RHOB Length = 356 Score = 216 bits (550), Expect = 1e-54, Method: Composition-based stats. Identities = 75/305 (24%), Positives = 121/305 (39%), Gaps = 10/305 (3%) Query: 4 AVDNEFQQWLSQINQVC-GNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 A D F W I+ + + T+ +T +D H + L+ + R+ Sbjct: 30 APDERFSLWKESISFMFQVEADHAVRTDDFTAEVDAHMFGQIVLARTKSRKQFWERSELT 89 Query: 63 VKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLP 122 + F +G E D Q + + + D +R W + +SL++P Sbjct: 90 IARDGMDHFMIQLFETGDMFYEHDGAQHSVAQDGLIIFDLARTSK-SWTNTFSNLSLIIP 148 Query: 123 RTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMN-NPALSETESEAALQAMVCLLR 181 R LLE + RL A PMVQL + ++ + LS +++ A + L+ Sbjct: 149 RELLEPKLVYPDGQHMRRLPASQPMVQLLYSHIKTLKELSDQLSLSQAADVNPATLSLVA 208 Query: 182 PVLHQRE-----SVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFAD 236 L+ S Q I++N+ L PE +A + G+S LY MF Sbjct: 209 ACLNSTADGVVISDANSHAAQIMLAKRAINENLSNPALTPEVVASKAGISRSKLYEMFRS 268 Query: 237 KGLVVAQYIRNRRLDFC-ADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGE 295 G V ++ +RL I ++ A I F +GF+ +S FS FK+RF MTP E Sbjct: 269 YGG-VKSFVLEQRLKGAMMALISNSNAHRSNAEIAFSFGFAYESTFSRAFKKRFSMTPTE 327 Query: 296 YRRKF 300 R Sbjct: 328 ARNSA 332 >UniRef50_B2IIZ5 Transcriptional regulator, AraC family n=1 Tax=Beijerinckia indica subsp. indica ATCC 9039 RepID=B2IIZ5_BEII9 Length = 317 Score = 215 bits (549), Expect = 1e-54, Method: Composition-based stats. Identities = 60/279 (21%), Positives = 119/279 (42%), Gaps = 4/279 (1%) Query: 22 NFTGRLLTERYTGVLDTHFA-KGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQ 80 + + H G++L ++ N R+ E+ D + +FQ SG Sbjct: 30 RVKPQTHGGPIVARIRPHCLSGGVRLIELSGGPFNGERSRAEIARDGDEYLGVLFQRSGS 89 Query: 81 AIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAER 140 + + + + +G G++ + + RP +++ LL+P + E + Sbjct: 90 TLCKVGDSRTLVGPGEVCVWLSERPTEFEMPSQFQKLCLLIPLSRFESVLHNATAYEGLH 149 Query: 141 LDADLPMVQLSHRLLQESMNN-PALSETESEAALQAMVCLLRPVLHQRESVQPRRE--RQ 197 L + + L L A + S A+ + LL +S + + Sbjct: 150 LPTNNHLTTLLGSYLTTLSEEVAAGPDGGSSEAVDVTLELLGAAFRVYQSQFDHQPHYQL 209 Query: 198 FQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAI 257 +++ I+ + + L P IA G+S+R LY +F+++G+ VA ++R RRL C + Sbjct: 210 RSRILRYIEARLDDASLTPLKIAKGNGISLRYLYLVFSEQGMTVAGWVRQRRLARCRAEL 269 Query: 258 RHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEY 296 + + + + + WGF+D +HFS +FK FG++P Y Sbjct: 270 DDVQNTKTITEVAYRWGFNDSAHFSRLFKSSFGVSPSAY 308 >UniRef50_C8QGB6 Transcriptional regulator, AraC family n=2 Tax=Enterobacteriaceae RepID=C8QGB6_9ENTR Length = 327 Score = 215 bits (549), Expect = 1e-54, Method: Composition-based stats. Identities = 61/301 (20%), Positives = 122/301 (40%), Gaps = 5/301 (1%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEV 63 A F+ W I + C G+ L+ + G L + + T++ S R + + Sbjct: 18 AEPQRFEYWNDVILRHCIPSDGKPLSGTFDGELGVREVGLVDICTLSASTHYWERKAKHL 77 Query: 64 KGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPR 123 + + + G +EQ R+ + + ++ L DA++ + + + +PR Sbjct: 78 RTGPEDDLWLGCFQGGYGQLEQGGRKANLTSTNLVLYDAAQTFRFSIGGYNNHL-IRIPR 136 Query: 124 TLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPAL---SETESEAALQAMVCLL 180 LL P + + A LD P + ++ +++ +P L + + + L+ Sbjct: 137 HLLCGKLPGAESMTATVLDESRPGIIPLREMIYQAVQSPELFSHPQLAGRFSQTLLDLLV 196 Query: 181 RPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLV 240 + Q + + ++ I ++ + L E IA +SVR++ R FA Sbjct: 197 LSLELQTPEKEHVERDLYARIRNYIRRHLTDPALNLESIALAHHVSVRTVTRAFARHQKT 256 Query: 241 VAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKF 300 I RL+ +A+ ++ +GFSD SHFS F++ FG+TP ++ Sbjct: 257 PVAIIWQERLEASREALVQGRVA-SVSQAAMDYGFSDFSHFSHAFRKAFGVTPHSVMKQH 315 Query: 301 R 301 R Sbjct: 316 R 316 >UniRef50_UPI000050F7EC transcriptional regulator, AraC family protein n=1 Tax=Brevibacterium linens BL2 RepID=UPI000050F7EC Length = 337 Score = 215 bits (549), Expect = 1e-54, Method: Composition-based stats. Identities = 68/313 (21%), Positives = 130/313 (41%), Gaps = 17/313 (5%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRL-LTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 + ++F W S ++ + G + + +S ++ + + RT Sbjct: 22 STASDFDGWKSLVSDSFVPLDTEPQRRGGFQGTISARDYDSVVMSHISANPHAVLRTPSL 81 Query: 63 VKG-----------SDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQ 111 + + ++ QL G ++ QD R+V + G + + D SRP +L + Sbjct: 82 ISRETAGPADGTAAAASNYYKVSLQLKGHGLLIQDGREVSLAPGSLAIYDTSRPYTLSFD 141 Query: 112 ESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMN-NPALSETESE 170 ++ P++ + + A + A+ + ++ +++ ++ P LS + Sbjct: 142 CDFSSYVMMFPQSRVNLPADTVGELTATSIGAEHQLGAVATQIITQAGAMLPTLSRSIGI 201 Query: 171 AALQAMVCLLRPVLH---QRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSV 227 +V LL V+ V R+R + ++ ID N+ + L P IA MSV Sbjct: 202 RLAGNVVDLLTTVMADELAEAEVPGERQRLWSEITAYIDANLADPQLSPSTIAAAHFMSV 261 Query: 228 RSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAAD-DEKLAGIGFHWGFSDQSHFSTVFK 286 R+L+++F G V+ IR RR+ C + +A IG WG D +HFS +F+ Sbjct: 262 RALHQVFEGSGETVSSEIRRRRIARCRQDLADPGQVQVPVAAIGARWGLGDPAHFSRLFR 321 Query: 287 QRFGMTPGEYRRK 299 G P +YRR Sbjct: 322 SVVGRPPAQYRRS 334 >UniRef50_D2AT05 AraC family transcriptional regulator n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2AT05_STRRD Length = 342 Score = 215 bits (549), Expect = 1e-54, Method: Composition-based stats. Identities = 70/309 (22%), Positives = 121/309 (39%), Gaps = 12/309 (3%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLLTE-RYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 + F W + R E + + ++++T+ + RT + Sbjct: 12 PTADRFAWWHEMTCRTHVPTVIRSDHEADFRATMRLLDLGAVQVATLHYPSLRPQRTPKL 71 Query: 63 VKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSK---QISL 119 ++ SD + L G + Q R+ +G D+ L D SRP + ++L Sbjct: 72 IRQSDPEMYCLSLTLRGTMTLAQAGRETVLGPQDLALYDTSRPFYGTTSGNGDRAASMTL 131 Query: 120 LLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSET-----ESEAALQ 174 +PRTLL + A L + L L + + + A S + Sbjct: 132 HIPRTLLPLPAGTVSRLTAVGLSGRQGIGALLCGHLGKLVRHAAEYTAADAARLSAITVD 191 Query: 175 AMVCLLRPVLHQRESVQPRRERQF--QKVVTLIDDNIREEILRPEWIAGETGMSVRSLYR 232 + L ++ RQ ++ I ++ + L E IA +SVR LY+ Sbjct: 192 LFAAMCAHHLEADAALPAETHRQVLQTRIHAFIQQHLGDPTLCAETIAAAHQISVRYLYQ 251 Query: 233 MFADKGLVVAQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGM 291 +F D+GL VA +IR+RRL+ C + A + I WGF+ HFS F+ +G Sbjct: 252 LFHDQGLTVAAWIRHRRLERCRRDLTDPALRSRPIHAIATRWGFAGNPHFSRTFRAAYGS 311 Query: 292 TPGEYRRKF 300 +P +YR + Sbjct: 312 SPSDYRHQA 320 >UniRef50_D0LBD5 Helix-turn-helix-domain containing protein AraC type n=1 Tax=Gordonia bronchialis DSM 43247 RepID=D0LBD5_GORB4 Length = 385 Score = 215 bits (549), Expect = 1e-54, Method: Composition-based stats. Identities = 47/297 (15%), Positives = 106/297 (35%), Gaps = 10/297 (3%) Query: 10 QQWLSQINQVCGNFTGR-LLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDD 68 +W + + + L +S++ + R+ ++ Sbjct: 38 DEWRNTLGSLYCEMDVAWPKGNGLDAEWGGRPFGDLHVSSIRCEEQTVIRSPAMIRSDPT 97 Query: 69 AWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQ 128 F G + Q R + G L+ P + ++ +Q+ + +P ++ Sbjct: 98 EDFLVCLITDGSVEVTQAGRATLLRPGGFAFLELGEPFVFHSPDTFRQVVVRVPGRMMSG 157 Query: 129 YFPH--QKPICAERLDADLPMVQLSHRLLQESMNNP-----ALSETESEAALQAMVCLLR 181 P+ + LL + N A S + + + + + + Sbjct: 158 RLPNSYAHRFTGREFAPTSRPAGIVGTLLTQIANADAPIPRAASTSFATSVVDMLTTTIM 217 Query: 182 PVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVV 241 L + R + ++ +I DN+ + +A + GMS R++ ++ A G Sbjct: 218 AELPAEHRKESFRSQDLARIQQVIADNLHDADFSLSDLAAQAGMSARNVQKLVATTGNSP 277 Query: 242 AQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRR 298 ++ R++ + + +A + GF D SHFS +F+++ G++PG YRR Sbjct: 278 MAWLYAARIERAKHLLMSTG--QSVAEVSECVGFRDVSHFSRMFRKQVGVSPGRYRR 332 >UniRef50_Q2KTV5 AraC-family transcriptional regulator n=1 Tax=Bordetella avium 197N RepID=Q2KTV5_BORA1 Length = 318 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 59/302 (19%), Positives = 112/302 (37%), Gaps = 7/302 (2%) Query: 4 AVDNEFQQWLSQINQVCGNFTGR-LLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 + + W + Q + + ++R+ G L + L LS + ++ + R Q Sbjct: 12 PGPDRSRHWEGAVGQTYFSLQLQFHDSDRFEGSLHSWKLGALSLSQLASTPLCYRRLKQH 71 Query: 63 VKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLP 122 + ++ + Q R + G L P + + L +P Sbjct: 72 LNDVNEEQYLVTVPRRSAIRFSQGGRDTECRPGAFLLEHGQSPYEFSYARDNALWVLKVP 131 Query: 123 RTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAAL-QAMVCLLR 181 L CA DA L + + + L Q +V LL Sbjct: 132 GESLRARLHTPNRYCALAFDATQGAGWLFASYVNLIGQQLLRGDDTARHVLGQHLVELLA 191 Query: 182 PVLHQRESV-----QPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFAD 236 + V P R ++ + ++ L P +A G+SVR L+ ++ Sbjct: 192 CSVEGDARVLSSQDSPVRNAHLSRIEHYVRQHLGNADLNPTQVAQACGISVRYLHSLYQG 251 Query: 237 KGLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEY 296 +G ++++ +RL+ + A+ +A I WGF+DQ+HFS ++K+R+G P + Sbjct: 252 QGQTFSEWLCGQRLERAHHTLLSASALHSIARIAQQWGFADQAHFSRLYKRRYGYPPSQA 311 Query: 297 RR 298 RR Sbjct: 312 RR 313 >UniRef50_A5VPA4 Transcriptional regulator, AraC family n=41 Tax=Brucellaceae RepID=A5VPA4_BRUO2 Length = 356 Score = 215 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 70/301 (23%), Positives = 125/301 (41%), Gaps = 10/301 (3%) Query: 5 VDNEFQQWLSQINQVCGNFTGRLLTE-RYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEV 63 W + + + + + G L + + + T++G N RT + Sbjct: 14 ATQRDDFWREAVKLIYDVMSSDDQSGKGFKGTLRSQQFGTCLIGSATSNGQNYQRTPSII 73 Query: 64 KGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPR 123 SD + ++G+ + + V GDI +LD + S E+ ++I++++ R Sbjct: 74 AQSDMDHYVLQAMIAGRMTGDFNGTNVSAKPGDIVILDLLQTVS-SSVEAGERITIVIQR 132 Query: 124 TLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMN-NPALSETESEAALQAMVCLLRP 182 LE+ + + L + P +L L+ L E+ AA +AM+ LL Sbjct: 133 GELEKLVG-WRNLHGMVLPGEAPTTRLLFEYLRGLDAVAAELPPNEALAAQEAMLTLLSA 191 Query: 183 VLHQRESVQ----PRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKG 238 + +E P +++T ID+N+ +L P I +S LYR F G Sbjct: 192 SITSKEEEAIENTPANLPMRHRIITYIDENLTNPLLGPHSIMQHFHLSRSHLYRAFEPDG 251 Query: 239 LVVAQYIRNRRLDFCADAIRHAADDEK-LAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 VA+ IR++RLD + L I + GF+D++ F+ FK RF ++P E R Sbjct: 252 G-VAKVIRDKRLDLAYRILIDRKGKPTLLKEIAYCCGFNDRTQFTKAFKARFELSPKEAR 310 Query: 298 R 298 Sbjct: 311 E 311 >UniRef50_B8HJE0 Transcriptional regulator, AraC family n=1 Tax=Arthrobacter chlorophenolicus A6 RepID=B8HJE0_ARTCA Length = 333 Score = 215 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 70/307 (22%), Positives = 130/307 (42%), Gaps = 9/307 (2%) Query: 3 PAVDNEFQQWLSQINQVCGNFTGRLLTER-YTGVLDTHFAKGLKLSTVTTSGVNLSRTWQ 61 A + W +++ +F L + G L G++ ++T R + Sbjct: 20 QAAVRSIEDWGVLLSRSLMSFEVELERPGAFQGYLRNRKVAGIEFIEMSTGKHLAHRGAE 79 Query: 62 EVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLL 121 + +D + Q++G QD R + GD+TL D +RP ++ + + + Sbjct: 80 SISSTDRPDYLLCLQIAGVGEFSQDNRTAVLQPGDLTLFDTTRPTTVVSSTDYRNLCMKF 139 Query: 122 PRTLLEQYFPHQKPICAERLDADLPMVQLSHRLL---QESMNNPALSE--TESEAALQAM 176 P+ L+ + A R A + LL + M+ + ++ AL + Sbjct: 140 PQRLINLPPEQLGQLTATRTGARDGFAPAAGTLLITMNQLMDTSSGRSKILAAQGALDII 199 Query: 177 VCLLRPVLHQRESVQPRR--ERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMF 234 + + L P+ +++ + ID+N+ + L P IA +S+R L+ +F Sbjct: 200 TTMFQRQLDISTPSYPQATSPALLEQIRSYIDENLSDPGLGPRTIAAAHYISLRQLHGIF 259 Query: 235 ADKGLVVAQYIRNRRLDFCADAIRHAADD-EKLAGIGFHWGFSDQSHFSTVFKQRFGMTP 293 +GL VA ++R++RL C + A A IG WGF SHF F++ FG+TP Sbjct: 260 QAQGLTVASWVRHQRLQRCRRDLSDPALHAVSAASIGLRWGFKTASHFGMSFRKTFGLTP 319 Query: 294 GEYRRKF 300 E+R++ Sbjct: 320 AEFRQEA 326 >UniRef50_Q1H4B9 Transcriptional regulator, AraC family n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H4B9_METFK Length = 327 Score = 215 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 74/304 (24%), Positives = 138/304 (45%), Gaps = 7/304 (2%) Query: 3 PAVDNEFQQWLSQINQVCGNFTGRLLTE-RYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQ 61 + I+Q + + + + + + + ++LST+ ++G+ + R Sbjct: 19 QPIHRRHDWLQHIISQEYTHVAIKAVRDMPLFNEMTIYPWQDMRLSTIRSNGITIQRQRG 78 Query: 62 EVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLL 121 E + + ++ V LSGQ ++EQ R+V + G++ L DA+ P ++ ++ + + Sbjct: 79 ECRNASQDAYFAVILLSGQYLLEQHGREVFLQPGEMALYDATSPHRIHCPGPFSKLIVSI 138 Query: 122 PRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLR 181 PR LL + + A R+ +L M + ++ + + +L L Sbjct: 139 PRALLRSHLAGVEHCTARRISPELGMSAIGTHFIRSAAQHANSLNLPQFNSLAPQALALL 198 Query: 182 PVLHQRESV-----QPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFAD 236 R +V I++++ + L IA TG+S R + +FAD Sbjct: 199 AASLASARPDHIHYGRSRSASLHRVRQFIEEHLHDHDLDSSLIAAATGLSARYINSLFAD 258 Query: 237 KGLVVAQYIRNRRLDFCADAIRHAADD-EKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGE 295 +GL + +Y+ RRL+ C +R A + +A I FHWGF DQ+HFS FKQ FG++P Sbjct: 259 EGLSLMRYVWQRRLEKCRQTLRQPAQHGQAIATIAFHWGFIDQAHFSRSFKQAFGVSPRA 318 Query: 296 YRRK 299 YR + Sbjct: 319 YRAQ 322 >UniRef50_B9JQ03 AraC-type DNA-binding domain-containing protein n=3 Tax=Agrobacterium radiobacter K84 RepID=B9JQ03_AGRRK Length = 302 Score = 214 bits (546), Expect = 2e-54, Method: Composition-based stats. Identities = 68/300 (22%), Positives = 116/300 (38%), Gaps = 2/300 (0%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEV 63 A + W Q+ + T+ + G + LS V ++ RT + + Sbjct: 3 ARSDTLSLWKEQLWSTYVRLESKAETDGFYGAVQEFLPHSHSLSLVDSTAQLTERTRRHI 62 Query: 64 KGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPR 123 + FQLSG ++ QDERQ + G+ L ++ RP SL + KQ+ L + R Sbjct: 63 RADQQEVVLVAFQLSGCGLVVQDERQARTAPGEFVLYESMRPYSLGFDGPFKQLVLRVDR 122 Query: 124 TLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPA-LSETESEAALQAMVCLLRP 182 + P + A DA ++ LQ + + E + L+ Sbjct: 123 ERMISTMPCIGNMTARTFDAKQGAGAVALDFLQSLAARGSQIDEGSLSPMERTAFDLVAT 182 Query: 183 VLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVA 242 + R F+++ + + +R+ +A GMS RSL R+ A+ G+ Sbjct: 183 GVLSSTGDLSPRRVLFERLRDRLIEKVRDPSFNQTDMAVLAGMSPRSLRRLCAENGISPG 242 Query: 243 QYIRNRRLDFCAD-AIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKFR 301 I RL D + I WGF+D S+F+ F+ +GMTP + R + Sbjct: 243 GLILRTRLQGATDSFALDINKRRSVTEIALSWGFNDISYFNRAFRTTYGMTPRQMRHSHQ 302 >UniRef50_D0LBE5 Helix-turn-helix-domain containing protein AraC type n=1 Tax=Gordonia bronchialis DSM 43247 RepID=D0LBE5_GORB4 Length = 342 Score = 214 bits (545), Expect = 4e-54, Method: Composition-based stats. Identities = 57/305 (18%), Positives = 114/305 (37%), Gaps = 14/305 (4%) Query: 5 VDNEFQQWLSQINQVCGNFTGRLLTE-----RYTGVLDTHFAKGLKLSTVTTSGVNLSRT 59 + + W ++ + + A L LS V + RT Sbjct: 29 PEKARELWSQTLDSTYCEMDVVWPGSPVGAADFGAEIVARQAGELSLSVVRADPHTVVRT 88 Query: 60 WQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISL 119 + G+A + Q + G +DAS P ++ + +Q+ + Sbjct: 89 PAMIASDPGDDLLLCLITRGRASIVQQGHSGVLSDGSFGFVDASMPFTVAGETPFEQVVV 148 Query: 120 LLPRTLLEQYFPHQ--KPICAERLDADLPMVQLSHRLL-QESMNNPALSETESEAALQAM 176 +PR L P + + +++ RLL +M++ L E A+ Sbjct: 149 RIPRATLAGRLPAAVVDDSLGRSISGTEGIGRVASRLLVDLAMHDDRLDEGSWAGVATAV 208 Query: 177 VCLLRPVLHQRESVQPRRERQ----FQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYR 232 + ++ + Q + ++ + ++ +I + + E GMSVR +++ Sbjct: 209 LEVVSASVQQCSTHLSATQQSHTDDLSAIQRVLLRDIADPDRTLADVGAELGMSVRYIHK 268 Query: 233 MFADKGLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMT 292 +F+ G ++ RRLD + + + A + GF D SHFS F+++FG++ Sbjct: 269 LFSASGTTPRAWLYARRLDRARTLLLQS--EITCANLSEQLGFRDVSHFSRAFRKQFGIS 326 Query: 293 PGEYR 297 PG YR Sbjct: 327 PGRYR 331 >UniRef50_A6W2J9 Helix-turn-helix-domain containing protein AraC type n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W2J9_MARMS Length = 299 Score = 214 bits (545), Expect = 4e-54, Method: Composition-based stats. Identities = 71/299 (23%), Positives = 131/299 (43%), Gaps = 11/299 (3%) Query: 9 FQQWLSQINQVCGNFTGRLLTE-RYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSD 67 W+ ++ +CGNF + G + GL ++ + T+ + R+ D Sbjct: 4 LDHWVHSVHSICGNFDTHPHPNIPFIGNMRLDDHNGLGVAHIETNAEKIVRSKST--SQD 61 Query: 68 DAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLE 127 D ++ + Q G + + + G+I L+D+S P ++ Q +Q+S+ LPR ++ Sbjct: 62 DKHYFVILQKKGVMGFSWSDNKDLLLPGEIALIDSSLPYDMHPQGLIQQMSVHLPRAYID 121 Query: 128 QYFPHQKPICAERLDADLPMVQLSHRLLQESMNNP---ALSETESEAALQAMVCLLRPVL 184 FP ++ Q+ +L + N + + +A A+ L++P L Sbjct: 122 SLFPSHAQHRITKIAQSRSSSQMLLIMLHQLANTDCQNPYFQEDGDALKCAISALIKPSL 181 Query: 185 HQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQY 244 + ++ I + EE L P IA E +S RSLYR+F++ L VA + Sbjct: 182 ENMNHDSAFSMK--ERAKQHILRLLNEENLSPGHIAKEMNISKRSLYRLFSEDNLSVAHF 239 Query: 245 IRNRRLDFCADAIRHAADD---EKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKF 300 I R++ C + A + + + WGFSD S FS FK+ G++P ++R+ Sbjct: 240 ILQMRIEKCCTDMLSADAAKRPLSITEVAYRWGFSDASQFSRAFKRIKGISPSQWRQSL 298 >UniRef50_D1S730 Transcriptional regulator, AraC family (Fragment) n=1 Tax=Micromonospora aurantiaca ATCC 27029 RepID=D1S730_9ACTO Length = 324 Score = 213 bits (544), Expect = 5e-54, Method: Composition-based stats. Identities = 78/304 (25%), Positives = 123/304 (40%), Gaps = 15/304 (4%) Query: 12 WLSQINQVCGNFTGRL-LTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAW 70 WL + R + + + ++L V+ RT + ++ SD + Sbjct: 1 WLDMMASTPTPLRVRTAHADDFVARAEFVDLGRMQLIRYRYPSVDCVRTSKLIQRSDPDY 60 Query: 71 FYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQES------SKQISLLLPRT 124 + LSG + +Q+ ++ + GD+T D SRP + + I L+P Sbjct: 61 YLLALTLSGTSQADQEGQRARCRPGDLTFYDCSRPHEVSHHADPAGSAYAHSIVALMPYD 120 Query: 125 LLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNP-----ALSETESEAALQAMVCL 179 L P+ A R+ + L L NP A +E L + L Sbjct: 121 ALPLPPRRLAPLFAGRMSGSEGVGGLVADFLIRITANPEQYHAADAERLGAVGLDLVATL 180 Query: 180 LRPVLHQRESVQP--RRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADK 237 L L + + RR +V + ++ + L P IA +SVRSL+R+F D+ Sbjct: 181 LGRNLVSEDEMPTEVRRRALQAQVRAYVRQHLGDATLDPGAIADAHHISVRSLHRLFEDE 240 Query: 238 GLVVAQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEY 296 VA YIR+ RL C + A D + I WGF D++HFS VF+ G TP EY Sbjct: 241 ETTVAAYIRDERLARCRRDLADPALSDRSIQVIAARWGFRDKAHFSRVFRTTQGETPQEY 300 Query: 297 RRKF 300 R + Sbjct: 301 RARH 304 >UniRef50_C5D1Y8 Transcriptional regulator, AraC family n=1 Tax=Variovorax paradoxus S110 RepID=C5D1Y8_VARPS Length = 344 Score = 213 bits (544), Expect = 5e-54, Method: Composition-based stats. Identities = 68/293 (23%), Positives = 110/293 (37%), Gaps = 5/293 (1%) Query: 5 VDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVK 64 F+QW + + E + L + L S R Q Sbjct: 18 PAENFEQWRDGLASLFETVRPDSEREAFRADLTAYNLGSFLLGLSCASPQMFRRDRQLAS 77 Query: 65 GSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRT 124 +SG+ E D + GDI D SR + + + +S+++PR Sbjct: 78 AVGVDHLLVQLYVSGKCEFEADGHAGRGKTGDIVCFDMSRQMNSR-TSTLEMVSVVIPRE 136 Query: 125 LLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMN-NPALSETESEAALQAMVCLLRPV 183 LL + LD + L L P ++ +ES+ A +A L+ Sbjct: 137 LLRLAPRTLDTLHGAVLDGETTFGTLLREHLMSMARVAPRINASESKLAAEATATLISAS 196 Query: 184 LHQ-RESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVA 242 L + Q + + I+ N+ L PE + G+S +LYR F G +A Sbjct: 197 LSGCGPAGSDLVGGSLQAIQSYIERNLNNPALSPEMLMRHFGLSRSALYRTFEALGG-IA 255 Query: 243 QYIRNRRLDFCADAIRHAADDE-KLAGIGFHWGFSDQSHFSTVFKQRFGMTPG 294 +YIR RRLD + ++ + F GFS+++ FS F+QRFG+ P Sbjct: 256 EYIRGRRLDRAFLRLTSVGTGRGSVSKLAFACGFSNETAFSRAFRQRFGVPPR 308 >UniRef50_B1LSU0 Transcriptional regulator, AraC family n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1LSU0_METRJ Length = 322 Score = 213 bits (543), Expect = 6e-54, Method: Composition-based stats. Identities = 68/305 (22%), Positives = 122/305 (40%), Gaps = 9/305 (2%) Query: 5 VDNEFQQWLSQINQVCGNFTGRLL-TERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEV 63 + F+ W I + + G L+ L ++ VT S V T + Sbjct: 12 PKDSFRLWRETIFERIVPVELTPATAHAFAGTLEAAEVGPLLITRVTQSAVTTVATPDTI 71 Query: 64 KGSD-DAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLP 122 + L G+ QD+R GDI ++D RP ++ ++ + + LP Sbjct: 72 RRHGKYETLNVAITLKGRVYSAQDDRTAIQNPGDIVVMD-RRPATMASDVDTQTLFVELP 130 Query: 123 RTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN-----PALSETESEAALQAMV 177 R LE+ + + + AD + QE + N P +S + + +V Sbjct: 131 RESLERALGSTRRFTSLTIGADQVGTSMVTTFFQELVRNAGRLTPDMSNRMASVGVDLIV 190 Query: 178 CLLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADK 237 + L + FQ+ + I+ ++ + L P +A G+S+R L +F ++ Sbjct: 191 ASIAERLAHDTPKNIQGVLIFQRALAHIEAHLGDLNLDPARLAAAVGVSLRHLQALFREQ 250 Query: 238 GLVVAQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEY 296 +A +I RRL+ A + + + + GF QSHFS FK +G++P EY Sbjct: 251 DRNIADWIWRRRLEIAAQRLADPGFAHLAVGELAYSCGFCTQSHFSRRFKDSYGISPSEY 310 Query: 297 RRKFR 301 R + R Sbjct: 311 RWRNR 315 >UniRef50_C6X6W8 Transcriptional regulator, AraC family n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X6W8_METSD Length = 337 Score = 213 bits (543), Expect = 6e-54, Method: Composition-based stats. Identities = 65/300 (21%), Positives = 131/300 (43%), Gaps = 7/300 (2%) Query: 2 NPAVDNEFQQWLSQINQVCGNFTGRLLTE-RYTGVLDTHFAKGLKLSTVTTSGVNLSRTW 60 + + + + I + + +D + K L+LS + ++ + L R Sbjct: 23 DISPWHRHEWLKEIIGREYAHVDITPPRNVPLLNEMDIYTWKQLRLSCIRSNAIKLKRLP 82 Query: 61 QEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLL 120 QE S ++ V LSG+ ++EQ R+V + GD+T+ DA+RP + S ++ + Sbjct: 83 QEPLLSSQDAYFGVVLLSGEYMLEQAGREVFLSPGDMTIYDATRPHRITCPGSFSKLIVS 142 Query: 121 LPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNP-ALSETESEAALQAMVCL 179 +PR L+ Q + A ++ + ++ ++ S + +S+ +A + L Sbjct: 143 IPRELMRQKLAGVEHCTAMKIPGSKGIGAVAADFMRASASQATGMSQLAFDALSDNALDL 202 Query: 180 LRPVLHQRESVQPRRERQFQK----VVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFA 235 L + + R + ++ ++ L + IA TG+S R + + A Sbjct: 203 FTLALQEIRPPTSQLSRSRSLSLYNIKACVEKHLAHPQLDSQMIAQATGLSSRYINELLA 262 Query: 236 DKGLVVAQYIRNRRLDFCADAIRHA-ADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPG 294 + + +++ RRL+ I A ++ I WGF+D SHFS FK++FG++P Sbjct: 263 AEETSLMRHVWERRLEKTHQDILGACQTGLAVSDIAMKWGFNDLSHFSRAFKRKFGLSPR 322 >UniRef50_Q9S2C6 Putative regulatory protein n=3 Tax=Streptomyces RepID=Q9S2C6_STRCO Length = 334 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 62/307 (20%), Positives = 128/307 (41%), Gaps = 9/307 (2%) Query: 4 AVDNEFQQWLSQINQVCGNFTG--RLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQ 61 + + + + + R E + + L++ + + V + RT + Sbjct: 11 PPRDREEVVRNAVWESVVAVDIDHRPPAEDLSVRIGLGTVGPLRICSARATAVTIRRTER 70 Query: 62 EVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLL 121 + ++ + Q++G +++ Q+ R+ +G G + ++ P +L + E L Sbjct: 71 LAREDEEPAVFLGLQVTGTSLVAQNGRECVLGPGQFAVYESIAPYTLLFDEGVDHHFLRF 130 Query: 122 PRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSET-ESEAALQAMVCLL 180 PR+ L + + L P +L+ + + L + ++A ++ V LL Sbjct: 131 PRSALALPDRLLRDTSSVTLGPGNPTARLAFTYFSQLAASDELHQGVHADAVVEPSVELL 190 Query: 181 RPVLHQRESVQPRRERQFQ-----KVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFA 235 R VL + + + ++ I ++ + L IA +SVR LY + + Sbjct: 191 RAVLTTQHGDPGLAKGPLESTLGLRITQYIRAHLADPDLSAARIAAAHDISVRHLYTVLS 250 Query: 236 DKGLVVAQYIRNRRLDFCADAIRHAADD-EKLAGIGFHWGFSDQSHFSTVFKQRFGMTPG 294 G+ + +IR+ RL C + +A IG WGF + +HFS VFKQ +G++P Sbjct: 251 GLGISLGDWIRSHRLAECRRELSGPNSRLRTIAAIGRRWGFVNATHFSKVFKQAYGLSPR 310 Query: 295 EYRRKFR 301 +R + R Sbjct: 311 AWRDQNR 317 >UniRef50_Q0SJU4 Transcriptional regulator, AraC family protein n=2 Tax=Rhodococcus jostii RHA1 RepID=Q0SJU4_RHOSR Length = 348 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 63/296 (21%), Positives = 109/296 (36%), Gaps = 6/296 (2%) Query: 12 WLSQINQVCGNFTGRLLTER-YTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAW 70 W+ I +TG + T L + VT + + RT + Sbjct: 53 WIDTIRDTFVALDIDPAEPTHFTGAVHTRHFAHLMAADVTATSQSFRRTARLADRHPLDL 112 Query: 71 FYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYF 130 ++G+ + QD R +G GD L + SRP + PR + Sbjct: 113 MQIGMVVAGEGQLIQDGRTCILGPGDFALYETSRPFTWNLHPDWHLRVFTWPRASVSLTE 172 Query: 131 PHQKPICAERLDADLPMVQLSHRLL-QESMNNPALSETESEAALQAMVCLLRPVLH---Q 186 + + A + + P+ QL +L + + + +S + + L Q Sbjct: 173 SQSQQLTARTVSSTSPVGQLLSPMLSRLLVADGEVSSGGAIGLAGGLADLAITAAQEECQ 232 Query: 187 RESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIR 246 + + +V I ++ + L P IA +S R+++R+FA A IR Sbjct: 233 PDDPDAAMRELYANMVQYIGQHLDDPDLSPSGIAKAFFVSTRTVHRVFARFDATAAATIR 292 Query: 247 NRRLDFCADAIRHAAD-DEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKFR 301 RL+ C A+ + L I +GF D S FS F +G++P YR + R Sbjct: 293 EHRLEACRQAMVSPRNIPRSLTDIAAQFGFIDLSVFSRAFTATYGISPSRYREQHR 348 >UniRef50_UPI0001AF1428 AraC family transcription regulator n=1 Tax=Streptomyces ghanaensis ATCC 14672 RepID=UPI0001AF1428 Length = 325 Score = 212 bits (540), Expect = 1e-53, Method: Composition-based stats. Identities = 69/309 (22%), Positives = 131/309 (42%), Gaps = 12/309 (3%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRL-LTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 + W + R ++ + + L+++ + ++ RT + Sbjct: 12 PPAERWDLWQDVATRTHVPNLLRSERSDDFRATMRVLPLGELQIAELDLPQLDTVRTPRT 71 Query: 63 VKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSK---QISL 119 ++ D + QL+G M QD + GAG + + D+S P + +S+ + + Sbjct: 72 IRRFDPEVYQVNCQLAGDGGMAQDGNESVFGAGHLVVADSSLPYDVRINRTSERTTTVVV 131 Query: 120 LLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNP-----ALSETESEAALQ 174 +PR L + + A + D M +R L + A + T + Sbjct: 132 SVPRARLPLPPRAVRRLLAVPVPVDRGMGGTLYRWLADVARRAEEFTEADAPTLASVTTD 191 Query: 175 AMVCLLRPVLHQRESVQP--RRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYR 232 + C+L L +++ P RR ++ ID N+ + L P +A G+SVR L++ Sbjct: 192 LLACVLGGCLDSEDALPPESRRRALHTRIRDFIDQNLGDPSLSPATVAAAHGISVRHLHQ 251 Query: 233 MFADKGLVVAQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGM 291 +FA +G A ++R+RRL+ C + + I WGF+D + FS VF++ +GM Sbjct: 252 LFAAEGEAPAAWVRHRRLERCRRDLADPRLRGRSVRSIAARWGFTDPATFSRVFRRAYGM 311 Query: 292 TPGEYRRKF 300 TP ++R Sbjct: 312 TPTDHRHHH 320 >UniRef50_A2SJ73 Transcriptional regulator, AraC family n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SJ73_METPP Length = 368 Score = 212 bits (540), Expect = 1e-53, Method: Composition-based stats. Identities = 71/302 (23%), Positives = 129/302 (42%), Gaps = 7/302 (2%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLLT-ERYTGVLDTHFAKGLKLSTVTT--SGVNLSRTW 60 A +F W + +++ R + ER+ + G +++ +T+ G+ +R Sbjct: 50 APSKQFDCWRDFVIDAHLHWSIRPIRCERFPAFIRQGRFDGFRVTHLTSAQGGIVGTRGA 109 Query: 61 QEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLL 120 +E+ +A + ++ G + D+ ++ + G L D++RP + +QI+L Sbjct: 110 REMAQDSEALYNLIYIAEGSICLVIDDEELTLTPGSFALWDSARPMTFITGAGLRQITLA 169 Query: 121 LPRTLLEQYFPHQKPICAERLDADLPMVQL-SHRLLQESMNNPALSETESEAALQAMVCL 179 +P+ L+ P R A + +L L+ L + L A V L Sbjct: 170 VPQRELQLALPRAGEFVGRRFAATSGLSRLFVDHLISLDARFGELPRGNAGHVLHASVEL 229 Query: 180 LRPVLHQRESVQPRRER--QFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADK 237 L L + R Q V+ ID ++ + L +A + G++ R L+R+F Sbjct: 230 LASTLSAQAEPCAGRSGKIVLQGVMAYIDRHLDDPELDTRRVASDCGITERHLHRLFERA 289 Query: 238 GLVVAQYIRNRRLDFCADAIRHA-ADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEY 296 A +IR +RLD C +R A + I + WGF D S FS +FK+ F +P +Y Sbjct: 290 DTTAAAWIRRQRLDRCRQDLRAAETAHLSITQIAYRWGFGDSSSFSKIFKREFASSPKDY 349 Query: 297 RR 298 R Sbjct: 350 RA 351 >UniRef50_B1Q2A8 Transcriptional activator for nphA1A2 n=4 Tax=Nocardiaceae RepID=B1Q2A8_9NOCA Length = 335 Score = 211 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 60/299 (20%), Positives = 114/299 (38%), Gaps = 11/299 (3%) Query: 11 QWLSQINQVCGNFTGRLLTER--YTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDD 68 QW S + ++ R + L +ST+ + R+ ++ Sbjct: 34 QWASTLERLYCETDVAWPEPRRHFDAEWGGRPFGDLHVSTIRADAHTVVRSPAMIQSDSG 93 Query: 69 AWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQ 128 + G + Q R + G LLD + P + +Q+ + PR +L Sbjct: 94 EGYLVCLVTDGSVEVRQSGRATVVEPGSFALLDCAAPFVFHSPAPFRQVVVRSPREVLTS 153 Query: 129 YFPH--QKPICAERLDADLPMVQLSHRLLQESMNNPA-----LSETESEAALQAMVCLLR 181 P + A + D L RL + + A + + + +A+ + L Sbjct: 154 RLPGRIVEHGTARSIHGDTGAGGLVGRLFVDIADMDAPMSQGAAVSFASSAVDMLATALT 213 Query: 182 PVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVV 241 L + R +V +I+ N+ + + IA GMS+R+++++F +G Sbjct: 214 EGLLATSAADLHRTEDLTRVQRVIEQNLHDADITLSDIAAAAGMSLRTVHKLFNAEGTTT 273 Query: 242 AQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKF 300 ++ RL+ + D +A + GF D SHFS +F+ FG +PG YR++ Sbjct: 274 RAWLYQARLEAARRYLL--TTDLSVADVSECAGFRDVSHFSRLFRSTFGSSPGLYRKEH 330 >UniRef50_C9NAR3 Transcriptional regulator, AraC family n=3 Tax=Streptomyces RepID=C9NAR3_9ACTO Length = 322 Score = 211 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 58/309 (18%), Positives = 129/309 (41%), Gaps = 9/309 (2%) Query: 2 NPAVDNEFQQWLSQINQVCGNFTGR--LLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRT 59 + + + + + L + + A L + + + + + RT Sbjct: 9 DIPARDREETIRHAVWESLVRIDIDHHLPPDDLAAHIGLDTAGPLGICSARATSMTIRRT 68 Query: 60 WQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISL 119 + + ++ + Q+SG +++ Q+ RQ + GD+ L D P +L + E + Sbjct: 69 PRLAREDEEPAVFLGLQVSGTSMVVQNGRQALLRPGDLALYDTVSPYTLLFDEGVDHHFV 128 Query: 120 LLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQES-----MNNPALSETESEAALQ 174 PR L + + A L P+ L+ + + + ++ +E +++ Sbjct: 129 RFPRAALALPERALRDVTAVTLGPGNPVAGLASTYFSQLVVSAGLRSGPHADAVAEPSIE 188 Query: 175 AMVCLLRPVLHQRESVQPRRERQFQ-KVVTLIDDNIREEILRPEWIAGETGMSVRSLYRM 233 + ++ L ++ + E ++ + ++ + L IA +SVR LY + Sbjct: 189 LVRAVVATQLGSQDLARAPMEATLSLRIRRYMRAHLADSDLSAARIAAAHDISVRHLYTV 248 Query: 234 FADKGLVVAQYIRNRRLDFCADAIRHAADD-EKLAGIGFHWGFSDQSHFSTVFKQRFGMT 292 A G+ + +IR+ RL+ C + +A +G WGF D +HFS VF++ +G++ Sbjct: 249 LARSGISLGDWIRSHRLEECKRELAGPQGRSRTIAAVGRSWGFVDATHFSKVFRKAYGVS 308 Query: 293 PGEYRRKFR 301 P ++R + R Sbjct: 309 PRDWREENR 317 >UniRef50_A0NZA7 Probable transcriptional regulator n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NZA7_9RHOB Length = 312 Score = 211 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 71/299 (23%), Positives = 131/299 (43%), Gaps = 5/299 (1%) Query: 6 DNEFQQWLSQINQVCGNFTGRLLTER-YTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVK 64 +F+ W +++ ++ R + + G+++ + SR E++ Sbjct: 14 AAQFEAWRHALSRTHLDWDLRPSETSEFHADIRERILDGIRVVECSCDPCEGSRRKPELR 73 Query: 65 GSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRT 124 SD+A+F +F+LSG I+ Q +RQ ++ AGD L D+ R +++LL+P+ Sbjct: 74 HSDEAYFGVLFELSGHEIIRQGDRQAELSAGDFVLWDSEREMDFKVTSRLHKLTLLIPKF 133 Query: 125 LLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN-PALSETESEAALQAMVCLLRPV 183 ++ + + + +S L+ + + E ++EA +Q ++ LL Sbjct: 134 RAKRLEWDVERFAGTVVKNLSAVSGISAEALRRLARDFTTIEEKDAEAVMQPILSLLMAT 193 Query: 184 LHQRESVQPR---RERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLV 240 L R+ F I +N+ + L P +A G+S+R L+ +FA Sbjct: 194 LTTRQEPASASMAHRDHFSAFCRFIRNNLEDGRLDPRTVAEAHGVSLRYLHTVFAHNNDT 253 Query: 241 VAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRK 299 ++R RL C + + + I F WGF+D +HFS FK FG+ P RRK Sbjct: 254 CCNFMRRERLRRCHADLARPHCRDTITEIAFRWGFNDAAHFSRAFKAEFGIAPKTLRRK 312 >UniRef50_D2B571 AraC-type DNA-binding domain-containing protein-like protein n=2 Tax=Actinomycetales RepID=D2B571_STRRD Length = 353 Score = 211 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 64/312 (20%), Positives = 118/312 (37%), Gaps = 12/312 (3%) Query: 2 NPAVDNEFQQWLSQINQVCGNFT-GRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTW 60 + + F++W +NQ E + + + V RT Sbjct: 11 DVPPADRFERWRELVNQAHAPMDMTSDHREDFRASQRLLDLGSVSVWRTAFQSVCCRRTP 70 Query: 61 QEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQ---I 117 + ++ SD + +G + + + ++ + + D SRP L+ +SS + Sbjct: 71 KLIRQSDPEGVHLSLPTNGPLVTVRGDHEIVYDPYSLCVYDTSRPTELHAGDSSNLHAGV 130 Query: 118 SLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMN-----NPALSETESEAA 172 +L +P+ LL + + RL L L M P+ A Sbjct: 131 ALEIPKALLHLPGNMLEKLTTRRLSVREGFGALLAHFLTHLMKGTGSYQPSDGFRLGTVA 190 Query: 173 LQAMVCLLRPVLHQRE--SVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSL 230 + + L L + + RR+ ++ I+ N+ + L P IA +SVR L Sbjct: 191 VDLVSALFAHTLDADDILPPETRRQTLILRIHAFIELNLVDRALTPADIAAHHHISVRYL 250 Query: 231 YRMFADKGLVVAQYIRNRRLDFCADAIRHAAD-DEKLAGIGFHWGFSDQSHFSTVFKQRF 289 +F +G V +IR RRL+ C + + + + + GF+ + FS F+ + Sbjct: 251 QLLFQQQGKTVTGWIRRRRLERCREDLADPSQLARSIRAVALRRGFATSADFSRAFRAAY 310 Query: 290 GMTPGEYRRKFR 301 GM+P EYR R Sbjct: 311 GMSPSEYRHAAR 322 >UniRef50_B4UYA5 AraC family regulatory protein n=1 Tax=Streptomyces sp. Mg1 RepID=B4UYA5_9ACTO Length = 330 Score = 211 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 72/308 (23%), Positives = 129/308 (41%), Gaps = 13/308 (4%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLLTE-RYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 ++ F+ W ++Q G + G ++ +++T++ +G+ RT + Sbjct: 12 PTEDRFEWWREVVSQGAGATDVTSEDRAGFAGSMEVLSLGAARIATLSYAGLRSQRTARL 71 Query: 63 VKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYW----QESSKQIS 118 ++ SD + L G + Q ++ + GD + +S P S++ + Sbjct: 72 IRRSDPETYELTLLLGGTMGVSQARQETLLRPGDFNVWSSSLPYDSQSAGEPDGSARAVV 131 Query: 119 LLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVC 178 L LPR+ L + A L + + + R L + + E L M Sbjct: 132 LHLPRSFLPLPGAKVDRLLAHGLPSGSGVAAVFARHLTSVVREAQSLTSVDEERLGVMTW 191 Query: 179 LLRPVL-------HQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLY 231 L R R + +++ I+DN+ + L P IA +SVR L+ Sbjct: 192 DLATAFVAHHVDAADRLPPHTRHQLLLKRLDLFIEDNLADPALSPRQIADRHHISVRLLH 251 Query: 232 RMFADKGLVVAQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFG 290 R+FAD+ V+Q IR RRL+ C+ + + +G WGF+D + FS F+ +G Sbjct: 252 RLFADRKETVSQTIRRRRLERCSADLVDPRLRALPVHEVGRRWGFTDAAGFSRTFRGAYG 311 Query: 291 MTPGEYRR 298 TPGE+RR Sbjct: 312 WTPGEHRR 319 >UniRef50_A2SKZ3 Transcriptional regulator, AraC family n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SKZ3_METPP Length = 325 Score = 211 bits (538), Expect = 2e-53, Method: Composition-based stats. Identities = 67/303 (22%), Positives = 125/303 (41%), Gaps = 6/303 (1%) Query: 4 AVDNEFQQWLSQINQVCGNFTGR-LLTERYTGVLDTHFAKGLKLSTVTTSGV---NLSRT 59 +W + + +R+ + L ++ +T+ G +++R+ Sbjct: 13 PPGQRVARWTEAASDRFVESRFKVQDPDRFVASMLHRDLAELSVTRITSVGHGFKHITRS 72 Query: 60 WQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISL 119 ++V + + +F QL G + Q R+ ++ G + D RP L +E +Q L Sbjct: 73 QRQVARAHEDFFLVSVQLEGSCWIAQGGRETRLAPGQFAIYDTRRPYELLLEEDYQQAVL 132 Query: 120 LLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALS-ETESEAALQAMVC 178 +P L P A+ + A + ++E+ LS +EA L A+ Sbjct: 133 RIPCATLMARAPDCDAQTAQAISAASSSARRLIHQVREACRGTRLSRPALAEALLGAVGG 192 Query: 179 LLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKG 238 LR R + R ++ + ++ + L IA G+S L+++F +G Sbjct: 193 GLRGDADSRAATPHSRRTLLARIKAHVVAHLGDPQLSVPGIAATLGLSTSYLHQLFRSEG 252 Query: 239 LVVAQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 + ++I +RL C A+ L I + GFSD +HFS F+QR+G +P EYR Sbjct: 253 STLERWIWAQRLAACERALIDPRAARHTLTQIAYSHGFSDAAHFSRSFQQRYGASPREYR 312 Query: 298 RKF 300 + Sbjct: 313 KSA 315 >UniRef50_A4Q9T5 Putative uncharacterized protein n=1 Tax=Corynebacterium glutamicum R RepID=A4Q9T5_CORGB Length = 308 Score = 211 bits (537), Expect = 3e-53, Method: Composition-based stats. Identities = 66/305 (21%), Positives = 117/305 (38%), Gaps = 6/305 (1%) Query: 1 MNPAVDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTW 60 M F QW + N + ++L + T + T Sbjct: 1 MESIQAYNFTQWRQIVASSFHNVRAAAPAPNFRATAHHKHVGDIELFDMITDPHTVIHTE 60 Query: 61 QEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLL 120 + QL G A + QD R + GD+ L RP L + E + + + Sbjct: 61 GDGSFPLSTMCKFSLQLEGVATLVQDGRSCTMSPGDLALYTGKRPYHLVFDEPQRSLVVY 120 Query: 121 LPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMN-----NPALSETESEAALQA 175 PR+LL+ I A + D + ++ L ++ +++ A+L Sbjct: 121 FPRSLLQLRDDQIDMITATPISRDEGLGKIIIPLFEQFARNLDDLQGLHAQSLIRASLDL 180 Query: 176 MVCLLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFA 235 +V + + + F++ + ID+N+ + L P IA +SVR+L+ F+ Sbjct: 181 LVTVFAEHTERMNGELEDSSQLFRRATSYIDENLHDLDLAPGTIADALYVSVRNLHAHFS 240 Query: 236 DKGLVVAQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPG 294 +GL V+ YIR RRL+ + + D + I G D S+ S F+ +G +P Sbjct: 241 SQGLTVSAYIRARRLNAIHADLGNPQMRDFTIQSISARHGLVDASYVSKAFRAEYGESPR 300 Query: 295 EYRRK 299 YR + Sbjct: 301 TYRTR 305 >UniRef50_Q162N1 Transcriptional regulator, AraC family, putative n=4 Tax=Rhodobacteraceae RepID=Q162N1_ROSDO Length = 320 Score = 211 bits (537), Expect = 3e-53, Method: Composition-based stats. Identities = 58/298 (19%), Positives = 113/298 (37%), Gaps = 8/298 (2%) Query: 11 QWLSQINQVCGNFTGR-LLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDA 69 QW ++ E + G ++T + LS + G+ R + D+ Sbjct: 16 QWQEAVSDTFFPLETTMAEGETFAGAMNTWNLGIVGLSHMRCDGILYKRHKRHFLDEVDS 75 Query: 70 WFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQY 129 G Q+ RQ G+ + P + +++++ + L + + Sbjct: 76 SLLITIPRLGNVGFNQNARQANCSPGEFLVERGDLPYEFWHEQTNELLVLKVSSESVRAR 135 Query: 130 FPHQKPICAERLDADLPMVQLSHRLLQESMNN-PALSETESEAALQAMVCLLRPVLHQRE 188 + A D + +++ + + L E AA + ++ LL + + + Sbjct: 136 IGPTDRLAALSFDGTAGVASYFLDVVKTTAEHVDLLDEAARSAAGKHILDLLCLAIRKDD 195 Query: 189 SVQPR-----RERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQ 243 V R + I +N+ E L +A +S+R L ++F D ++ Sbjct: 196 RVLDSNTSTIRAAHLHRAEQFIRNNLSNENLSSSLVAEACNVSLRYLQQLFLDADKSISG 255 Query: 244 YIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKFR 301 +IR +RL + + +A I WGFSDQS F+ ++ +FG TP E RR + Sbjct: 256 FIREKRLIRAREDLC-VEGTITIAEIAHRWGFSDQSQFNKAYRAQFGCTPTETRRSAQ 312 >UniRef50_A1WI21 Transcriptional regulator, AraC family n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WI21_VEREI Length = 317 Score = 210 bits (536), Expect = 4e-53, Method: Composition-based stats. Identities = 69/299 (23%), Positives = 113/299 (37%), Gaps = 9/299 (3%) Query: 11 QWLSQINQVCGNFTGRLLTE-RYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDA 69 W I + E R+ G +D ++LS + +S + R Q + + Sbjct: 14 YWREAIANAYFDLQLSFGDEHRFDGQIDIWDLGTVELSLLQSSALAYRRLRQHCRAQ-ER 72 Query: 70 WFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQY 129 Q Q R + G L + P + + L LP L+ Sbjct: 73 QMLVTMPFQSQVEFTQLGRSTRCAPGQFLLESSEEPYDFGHGQDNAMWVLKLPVAALKAR 132 Query: 130 FPHQKPICAERLDADLPMVQLSHRLLQESMN--NPALSETESEAALQAMVCLLRPVLHQR 187 CA + D+ + +L H LQ ++ LL L Q Sbjct: 133 IGEPSRFCARQYDSLQGLGRLFHDYLQLVARHCRADHGSHVRSLMASQLIDLLALSLQQH 192 Query: 188 E-----SVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVA 242 S R+ ++ + ++ + L P+ IA +G+S+R L+++F D G VA Sbjct: 193 PDALQSSHSAVRDAHLARIEAHVHRHLSDPALSPQSIAQASGISLRYLHQLFEDTGQSVA 252 Query: 243 QYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKFR 301 Q+IR RL +A+ A +A I + GF DQ+ FS F+++FG P E R R Sbjct: 253 QWIRELRLQSAHEALSRANGQTTVAQIAYGAGFGDQAQFSHAFRKKFGHAPSEMLRSSR 311 >UniRef50_C3JZK1 AraC family regulatory protein n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3JZK1_PSEFS Length = 332 Score = 209 bits (533), Expect = 8e-53, Method: Composition-based stats. Identities = 67/311 (21%), Positives = 121/311 (38%), Gaps = 23/311 (7%) Query: 6 DNEFQQWLSQINQVCGN-----------FTGRLLTERYTGVLDTHFAKGLKLSTVTTSGV 54 + +W ++ G L + G L+ L+ +T S Sbjct: 15 SDRLMKWKEFMSDHLGRTPEYIKRLEATHIDPLHNGNFQGRLEYGDLGQLRFCRMTASAH 74 Query: 55 NLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESS 114 SR + D + Q++G + EQ ++ + D+ L+D +P S+ + Sbjct: 75 RYSRHLSKALDVVDTPRMLILQVAGVSHFEQGQQSSTVAPDDMLLVDCGKPFSVTSTQGC 134 Query: 115 KQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN-PALSETESEAAL 173 + L L + L + ++ L+ ++ + P L+ + Sbjct: 135 EHFIL-----LFQGAAGQLTQTGDMHLSGRNGLGRMLMHLISDAYHQYPLLNSQSAGLIG 189 Query: 174 QAMVCLLRPVLHQRESVQPRRERQF----QKVVTLIDDNIREEILRPEWIAGETGMSVRS 229 ++ LL L ++ + ++ I+ ++ + L E IA SVRS Sbjct: 190 DSIAGLLNNALKNKQDEKQLDHDFRFFKQNRLKAYIERHLADRDLSIERIANAEQCSVRS 249 Query: 230 LYRMFADK-GLVVAQYIRNRRLDFCADAIRHA-ADDEKLAGIGFHWGFSDQSHFSTVFKQ 287 L+R F D+ G V++YI RRL CA+ +R+ L I + WG+ SHFS FK Sbjct: 250 LHRAFQDELGCSVSEYIWQRRLSRCAEDLRNREQTHRSLTEIAYAWGYGSSSHFSRHFKS 309 Query: 288 RFGMTPGEYRR 298 FGM+P +R Sbjct: 310 TFGMSPRLFRE 320 >UniRef50_B5HV97 AraC-family transcriptional regulator n=2 Tax=Streptomyces RepID=B5HV97_9ACTO Length = 338 Score = 209 bits (533), Expect = 9e-53, Method: Composition-based stats. Identities = 59/311 (18%), Positives = 121/311 (38%), Gaps = 15/311 (4%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEV 63 + F +W + + + + + G + + + ++ R+ + V Sbjct: 26 PAEERFDRWRELVGRTRSSESVSAHAADFWGDIRLLELGPVTVMRMSFLPTRFRRSPEMV 85 Query: 64 KGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQIS----- 118 + SD ++ L G+ +E R + G D+ L+++SRP L + ++ + Sbjct: 86 RRSDPELYHLSLLLDGELGLEHAGRNSRFGPHDLHLVESSRPYDLGPTDDRERRAVKGVG 145 Query: 119 LLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMN-----NPALSETESEAAL 173 + P+ LL + + L + L L PA + L Sbjct: 146 VDFPKALLPLPPHRVHELLGQGLPGQEGVGALLAEFLVGLARQAETLQPADARRLGTVVL 205 Query: 174 QAMVCLLRPVLHQRESVQP--RRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLY 231 + ++ ++ P R++ ++++ I N+ + L P IA +S+ L+ Sbjct: 206 DLLAAWFAQLMDTEAALSPETRQKVTVERILAFIRQNLHDPELTPPVIAAAHHISLSYLH 265 Query: 232 RMFAD--KGLVVAQYIRNRRLDFCADAIRHAADD-EKLAGIGFHWGFSDQSHFSTVFKQR 288 R+F +G VA +IR RRL+ + + + I WGFS S F+ F+ Sbjct: 266 RIFQQRSQGETVAAWIRKRRLEGARRDLADPSLHGTPIHAIAARWGFSRASDFTRAFRAV 325 Query: 289 FGMTPGEYRRK 299 G +P E+R + Sbjct: 326 HGQSPREFRLR 336 >UniRef50_Q2G766 Transcriptional regulator, AraC family n=1 Tax=Novosphingobium aromaticivorans DSM 12444 RepID=Q2G766_NOVAD Length = 312 Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats. Identities = 63/301 (20%), Positives = 121/301 (40%), Gaps = 10/301 (3%) Query: 2 NPAVDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQ 61 + A + + W ++V + E ++G + + L + ++ + RT Sbjct: 11 DVAPQDRARYWNEIADRVFTGTFVNVPGEDFSGRMLSWRVGELDMIRTDSTHSGVGRTP- 69 Query: 62 EVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLL 121 + D+ Q G + Q + + + GD L P S+ + + + Sbjct: 70 -IAQDDER-LILHLQCRGTSQHMQKQAECALEPGDFVLASPHIPYSIKLTGH-EMLVVEF 126 Query: 122 PRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNP--ALSETESEAALQAM--- 176 PR L + FP +R+ P ++ H L A + E E + A+ Sbjct: 127 PRAPLAERFPGVDDALLQRMCGASPGGRVFHDFLLSLWQQGERAAEDPEWEVGVNAVFYD 186 Query: 177 VCLLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFAD 236 + + QR + + +KV+ ++ ++ + LR IA +SVR++ +FA Sbjct: 187 LAAMAMRGAQRPNAEVGEADLRRKVLAMVSSSLEDPALRTASIADACNISVRTVQNVFAA 246 Query: 237 KGLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEY 296 G YI +RL AD + D + I F GF+D ++F+ F+Q+FG P ++ Sbjct: 247 MGTTPTAYILEQRLRRAADRLV-GRPDASITEIAFELGFNDSAYFTRCFRQQFGAAPRDW 305 Query: 297 R 297 R Sbjct: 306 R 306 >UniRef50_Q38ZW3 Transcriptional regulator, AraC family n=2 Tax=Burkholderia cepacia complex RepID=Q38ZW3_BURS3 Length = 324 Score = 209 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 59/298 (19%), Positives = 112/298 (37%), Gaps = 6/298 (2%) Query: 7 NEFQQWLSQINQVCGNFTGR-LLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKG 65 W+ + + +E L + + + RT + Sbjct: 20 ERVDFWVDHVARTLVRIECSGKSSEGIDASLRKRDLGLFGACDIVANRHAVVRTSHNIHA 79 Query: 66 SDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTL 125 + +GQ QD +Q G GD+ L D S P + L +PR + Sbjct: 80 DQRDAVFICLMHAGQGYTFQDVDCMQHGPGDLVLYDTSMPYGHGFPADMAMTVLDVPRDV 139 Query: 126 LEQYFPHQKPICAERLDADLPMVQ-LSHRLLQESMNNPALSETESEAALQAMVCLLRPVL 184 E + ++D D + ++ P + E A++ L++ +L Sbjct: 140 FEARVGPWRYRSLVKIDRDDGVASWAVRQVYALLAAPPEPTSDARERRAAAILDLVQSML 199 Query: 185 HQRESVQPR---RERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVV 241 R+ + ID ++ ++ L + ++ +S R L R+F +G+ + Sbjct: 200 RLRDGDASPTKSTVHTLSRAKAFIDSHLADDDLDSQSVSRAINLSPRQLARVFEIEGMPL 259 Query: 242 AQYIRNRRLDFCADAIRH-AADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRR 298 +YI RRL+ C +R + ++ I F WGF++ +HFS ++ RFG TP + R Sbjct: 260 TRYILARRLERCRADLRDRSLKHLTVSEIAFRWGFNNSAHFSRSYRARFGETPSDTRA 317 >UniRef50_B1LTK5 Transcriptional regulator, AraC family n=2 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1LTK5_METRJ Length = 327 Score = 208 bits (531), Expect = 1e-52, Method: Composition-based stats. Identities = 63/303 (20%), Positives = 124/303 (40%), Gaps = 9/303 (2%) Query: 7 NEFQQWLSQINQVCGNF-TGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKG 65 + F+ W RL + + ++ GL + + + T + ++ Sbjct: 14 DRFRLWRDVCEDRLVPMAQDRLNDDPFHATIEGASIGGLVFTKFALRNLRAATTPRTLRH 73 Query: 66 SDD--AWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPR 123 + + LSGQ +Q +R GD ++ D + P ++ S+ +++ +PR Sbjct: 74 ENHKTDHLFMSIVLSGQVRADQYDRSSTDRVGDFSIRDTNTPWTIEHGGYSEVLAIGIPR 133 Query: 124 TLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMN-----NPALSETESEAALQAMVC 178 LE + + DLP L+ L ++ P ++E+ L +V Sbjct: 134 ERLEGALGSARLFAGVTVGGDLPTATLTRSFLGNLLSLGDRLTPQVAESMVSTGLDLIVA 193 Query: 179 LLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKG 238 L L + + Q+ ++ ++ + L P +A G+S+R L +F + Sbjct: 194 SLAERLAREAQQPVQDSVVVQRARAYLEAHLHDPTLDPPRLAAAAGVSLRRLQALFRAQD 253 Query: 239 LVVAQYIRNRRLDFCADAIRHAAD-DEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 +A +I +RRL+ A + L + + GF QSHFS FK+R+G++P +YR Sbjct: 254 RHIADWIWHRRLEAAAKRLADPGCLHMPLGTLAYGCGFLSQSHFSRRFKERYGLSPRDYR 313 Query: 298 RKF 300 + Sbjct: 314 MRA 316 >UniRef50_B0SW51 Transcriptional regulator, AraC family n=1 Tax=Caulobacter sp. K31 RepID=B0SW51_CAUSK Length = 338 Score = 208 bits (531), Expect = 1e-52, Method: Composition-based stats. Identities = 65/299 (21%), Positives = 114/299 (38%), Gaps = 10/299 (3%) Query: 2 NPAVDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQ 61 + + + ++ R ++ + + L T G + RT + Sbjct: 24 SVPPEERHDYYRREVLSA---LDARDPEPGFSANITSLRLGSLAFYVTETGGHTMFRTPE 80 Query: 62 EVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLL 121 + + F ++G + D G G++ + D SRP L+ K +S L Sbjct: 81 MIAADGRDHYIVQFNIAGSHTGDFDGVPFSAGPGEVGICDLSRPMLLHSTA-VKVLSTFL 139 Query: 122 PRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLR 181 PR ++ P + + LDA+ L L + P L +A + LL Sbjct: 140 PRAEVKAVAPDIE-LHGMVLDANR-AGLLIEHLASVTRWFPRLLPETLPGITRATIELLG 197 Query: 182 PVL---HQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKG 238 L R R + ++ N+ E L P I+ G+S +LYR+F G Sbjct: 198 ACLVMEASRADFGVRESPVLMRARAYVEHNLLEPTLNPAKISEALGVSRSTLYRLFEPLG 257 Query: 239 LVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 V Y+ +RRL A+ +++ I F GFS ++HFS F++ F + P + R Sbjct: 258 G-VTAYVWDRRLHLARAALLDPKRARRISEIAFQCGFSSEAHFSRSFRKAFNIRPSDLR 315 >UniRef50_Q0S9V9 Transcriptional regulator, AraC family protein n=3 Tax=Nocardiaceae RepID=Q0S9V9_RHOSR Length = 340 Score = 208 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 57/298 (19%), Positives = 113/298 (37%), Gaps = 11/298 (3%) Query: 11 QWLSQINQVCGNFTGRLLTE--RYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDD 68 +W ++ R+ L L +S V + RT + ++ + Sbjct: 34 RWADTLDSTYCEMDVDWPDRHARFAAELTVRPFGDLTVSVVHADPHTVVRTPEMIRSDPN 93 Query: 69 AWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQ 128 + G A ++Q R + G +LD++ P + + +Q+ L PR LL Sbjct: 94 DDYLLCLITRGTATLQQHSRSATLEQGAFGILDSAAPFVVDGRTEFEQVVLRAPRQLLIS 153 Query: 129 YFPHQ--KPICAERLDADLPMVQLSHRLLQESMNNPA-----LSETESEAALQAMVCLLR 181 + + + + M L R L + A S + + +A++ + +L Sbjct: 154 RLSAEAMEGVAGLGISGQTGMGGLVSRFLVDMATTDARLSVGSSASVAASAVELLTSVLT 213 Query: 182 PVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVV 241 + + + V + + + I E GMS+R ++++F+ G Sbjct: 214 EQARPLTATKRVHHDDLRTVQQTMTRYLHDPDHSTAEIGVELGMSLRYIHKLFSLTGTTP 273 Query: 242 AQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRK 299 ++ RLD + D +A I G+ D SHFS F++RFG++P +R + Sbjct: 274 RTWLYQLRLDRARGQLLDT--DSTVAEISDRVGYRDVSHFSRAFRKRFGVSPAHFREQ 329 >UniRef50_A1RDF3 Transcriptional regulator, AraC family n=1 Tax=Arthrobacter aurescens TC1 RepID=A1RDF3_ARTAT Length = 321 Score = 208 bits (530), Expect = 2e-52, Method: Composition-based stats. Identities = 69/304 (22%), Positives = 124/304 (40%), Gaps = 7/304 (2%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEV 63 A + + + +++ + E + GV+ + V + ++SRT ++ Sbjct: 13 ATSTDIRHYAHLVSERFAPLSLSTDREAFHGVIHGRTLGPVYAFDVQANQHSVSRTARDA 72 Query: 64 KGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPR 123 S + QL+G+ + Q R ++G GD+ D+ + + + L+ PR Sbjct: 73 AASPRETYQAHVQLAGRGHIVQGGRGTELGPGDVAFYDSDAAYGVTVDDDFHHLILVFPR 132 Query: 124 TLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPV 183 L + A RL D L+Q + + + + V +L Sbjct: 133 MALGVPADGAAQLAATRLGGDGAAGLARSFLVQLARTLESAPGYVRTRLVHSAVDMLGIA 192 Query: 184 L------HQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADK 237 L ++ +P R R + + I+D++ E L P IA +SVR L+ FAD Sbjct: 193 LLEELGHSPVDTGRPSRARVHAEALAYIEDHLHEPDLAPGQIAAALFVSVRHLHAAFADT 252 Query: 238 GLVVAQYIRNRRLDFCADAIRHA-ADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEY 296 G V+ IR RRL+ CA L+ I G+ D +HFS +FK +G +P ++ Sbjct: 253 GQTVSGRIRERRLEHCARDFVDPLLAHIPLSRIAAGHGYLDMAHFSRLFKCTYGQSPRDF 312 Query: 297 RRKF 300 R + Sbjct: 313 RATY 316 >UniRef50_B2UHP4 Transcriptional regulator, AraC family n=2 Tax=Ralstonia pickettii RepID=B2UHP4_RALPJ Length = 338 Score = 208 bits (530), Expect = 2e-52, Method: Composition-based stats. Identities = 64/299 (21%), Positives = 125/299 (41%), Gaps = 7/299 (2%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEV 63 +++F W IN + + + + + +D + + ++ + R+ ++ Sbjct: 15 PREHQFAAWRDAINVLFDSRSAAPQSHGFQASVDAYLCGETGVGMLSAQAQHYDRSRSKL 74 Query: 64 KGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPR 123 + + L G GD+ ++DA++P + S+ +SL +PR Sbjct: 75 GRDGMDVYVLQYYLEGSCGQRDGASDSATRPGDLFIVDAAQPLA-TSTTDSRFLSLAVPR 133 Query: 124 TLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN-PALSETESEAALQAMVCLLRP 182 LL + L PMV L L ++ LS+ E++A + + L Sbjct: 134 RLLAPLLRAPDELSMRVLRGGAPMVGLLRDHLCSLYHSVGKLSDAEAQAVIPGTLQLAAA 193 Query: 183 VLH---QRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGL 239 ++ + RE F V + N+ + L PE ++ + G+S +LYR+F +G Sbjct: 194 AINCQVTEANAPAVRESLFASVCRHVQHNLSDLALSPEGVSVQFGISRATLYRLFEREGG 253 Query: 240 VVAQYIRNRRLDFCADAIRH-AADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 Y+R +RL C + + +A I +GFSD S+F+ +++ GM+P E R Sbjct: 254 -FFNYLRMQRLRQCHAILADRSQTHRSVAEIAQTYGFSDASNFARAYRRATGMSPRETR 311 >UniRef50_UPI0001B588BC AraC family transcriptional regulator n=2 Tax=Streptomyces RepID=UPI0001B588BC Length = 338 Score = 208 bits (529), Expect = 2e-52, Method: Composition-based stats. Identities = 57/301 (18%), Positives = 103/301 (34%), Gaps = 8/301 (2%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLLTE-RYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 W ++ RL G + + L++S V + R+ + Sbjct: 12 PPGERAGYWHELVSGTFIPLDVRLHEPVPSAGTITSRSLGPLQISEVEAGPQTVDRSARR 71 Query: 63 VKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLP 122 + + + Q G A + QD RQ + G T DA RP ++ + + + Sbjct: 72 IAQGGEEYLTVTLQHRGTARLTQDGRQALVEPGSFTCSDAGRPYRREQHDAFRFTAFRVH 131 Query: 123 RTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRP 182 +T L + D L L A + + L L Sbjct: 132 KTSLGVSDDDLRAATGTLFDGVSGTSGLVAAFLGRLARQAAGFDPHTGHRLALTASDLLA 191 Query: 183 VL------HQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFAD 236 +L +V + ++ + L PE +A +SVR L+R+F Sbjct: 192 LLVRERRGRLDPQAPEHARAMLTRVQEYVLLHLGDPGLCPERVAAAHHVSVRYLHRLFHA 251 Query: 237 KGLVVAQYIRNRRLDFCADAIRHAADDEK-LAGIGFHWGFSDQSHFSTVFKQRFGMTPGE 295 +G + +++ RL+ C + + + WGF SHFS F+ +GM+P E Sbjct: 252 EGTTLGRWVLRERLERCRRELARPGRAGPAVGAVAQRWGFVSPSHFSRAFRAAYGMSPRE 311 Query: 296 Y 296 + Sbjct: 312 W 312 >UniRef50_Q5YUM1 Putative transcriptional regulator n=1 Tax=Nocardia farcinica RepID=Q5YUM1_NOCFA Length = 309 Score = 208 bits (529), Expect = 2e-52, Method: Composition-based stats. Identities = 68/299 (22%), Positives = 121/299 (40%), Gaps = 8/299 (2%) Query: 9 FQQWLSQINQVCGNF-TGRLLTERYTGVLDTHFAKGL-KLSTVTTSGVNLSRTWQEVKGS 66 F W + I++ + G L L L+TV + +++R+ V+ + Sbjct: 9 FDHWETSISEAFVALRASTPDPASFRGALVQVGHGELCHLTTVDAAPQDVARSPGLVRRN 68 Query: 67 DDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLL 126 Q G+ +EQD R +G GD+ + D +RP +L + LLLPRT L Sbjct: 69 PTDSVMIGLQTRGRGFVEQDGRVAAVGPGDLVVYDPARPYTLRFPTPFVTRVLLLPRTHL 128 Query: 127 EQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN-----PALSETESEAALQAMVCLLR 181 + + A L + + + ++ A LLR Sbjct: 129 REVEQAIGDLTARALPGAGGIGAVFGAFVTSVAEQRDTLTEDTHQSLCWQAAALGTALLR 188 Query: 182 PVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVV 241 V P +E ++ T ++++ + L +A +S R L+++FA++ Sbjct: 189 TVAGTSTPHSPAQEDLLRRARTYAEEHLADPALNAAALARALHVSPRYLFKLFAERETTP 248 Query: 242 AQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKF 300 ++I+ RRLD I A ++ + GF+D +HFS FK RFG+TP + + Sbjct: 249 GRWIQARRLDRARAEIA-ANPAVLVSVVAARCGFADPTHFSRAFKSRFGLTPSAFAARV 306 >UniRef50_Q82RS6 Putative regulatory protein n=1 Tax=Streptomyces avermitilis RepID=Q82RS6_STRAW Length = 358 Score = 207 bits (528), Expect = 3e-52, Method: Composition-based stats. Identities = 71/309 (22%), Positives = 122/309 (39%), Gaps = 12/309 (3%) Query: 2 NPAVDNEFQQWLSQINQVCGNFT-GRLLTERYTGVLDTHFAK-GLKLSTVTTSGVNLSRT 59 + F + + + + ++ G+ +S+V + R+ Sbjct: 35 DVPAAERFSWFCELVARDMAPHDIVTEHVQDFSASATLLSLGEGIGVSSVAFPAMQSIRS 94 Query: 60 WQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQES--SKQI 117 + ++ SD + + G EQ QV GD+ L D+S+P ++ I Sbjct: 95 RRLIRRSDPELWVLALVVKGAMQREQGRNQVNPRPGDLVLYDSSQPYWASIATDDVAQSI 154 Query: 118 SLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN-PALSETESEAALQAM 176 L LPR + + + A L + + L +LL + P L ++ A+ Sbjct: 155 VLHLPRRTVPVPEQALRRMVATALPSRTGIGALLSQLLGGLVEQGPKLEAGQTGRVASAV 214 Query: 177 VCLLRPVL------HQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSL 230 V L L ++ RR Q ++ + I + E L P +A +S+R+L Sbjct: 215 VDLTTAFLAGLSGADGPQTTAARRVAQLHQIKSFIRSRLGEPGLTPTAVAAAHHISLRAL 274 Query: 231 YRMFADKGLVVAQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRF 289 +F + G V +IR +RL+ C + +A I GF D + FS FK R+ Sbjct: 275 QYLFREDGRTVGAFIREQRLERCRAGLADPRLAGHSVAAIAVRAGFCDAAAFSRAFKARY 334 Query: 290 GMTPGEYRR 298 GM PGEYRR Sbjct: 335 GMPPGEYRR 343 >UniRef50_Q7CU51 Transcriptional regulator, AraC family n=1 Tax=Agrobacterium tumefaciens str. C58 RepID=Q7CU51_AGRT5 Length = 347 Score = 207 bits (528), Expect = 4e-52, Method: Composition-based stats. Identities = 65/299 (21%), Positives = 128/299 (42%), Gaps = 8/299 (2%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEV 63 + W IN + + + +D F + L +S + R+ ++ Sbjct: 22 PKRDAMGLWRDSINVLFDARLRSSQDDGFFASVDAAFIGNVALGRTQSSAQDFDRSRNKL 81 Query: 64 KGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPR 123 F F SG++ M + G GD+ ++D ++P + +SL++PR Sbjct: 82 ARDGMDGFLLQFYASGKS-MSRRGTGETAGPGDLYIIDMAQPLA-TATTDHDHLSLVVPR 139 Query: 124 TLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN-PALSETESEAALQAMVCLLRP 182 LLE L A LP+V L + + ++ + A + ++ L Sbjct: 140 RLLEGRLIGSGNHHERVLPAGLPLVSLLRETMTSIYRHFDVMNANDGAATVSPLLELATA 199 Query: 183 VLH---QRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGL 239 ++ + ++ Q + + ID+++ + L E + GE G+S R++YR+F G Sbjct: 200 AINNHVREDNAQGVQRALRASIRRYIDNHLLDPALSVEKVMGEFGVSRRTVYRLFEPLGG 259 Query: 240 VVAQYIRNRRLDFCADAIRHA-ADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 + I +RRL+ D +R + +A + +GF++ +FS VFK+ FG++P + R Sbjct: 260 -FSACITHRRLERAMDFLRAPQSSHMTIADVAAAYGFTNPENFSRVFKKTFGLSPRQIR 317 >UniRef50_B0T8Y9 Transcriptional regulator, AraC family n=1 Tax=Caulobacter sp. K31 RepID=B0T8Y9_CAUSK Length = 339 Score = 207 bits (527), Expect = 4e-52, Method: Composition-based stats. Identities = 60/295 (20%), Positives = 108/295 (36%), Gaps = 8/295 (2%) Query: 12 WLSQINQVCGNFTGRL-LTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAW 70 W + E +T L L L+ + + + R + Sbjct: 18 WAGLFAGRIEAMDFKPSRPETFTAQLAGSDLGPLHLARLACAKTTIERGEGHLAHKTSPA 77 Query: 71 FYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYF 130 ++ + + G + + + GD L D++ P + + + ++ + L + + L+++ Sbjct: 78 YFLMLLIGGSGEISHYGNTITLEEGDFVLCDSTAPLKIAFPDDAEALFLKVGASTLKEHL 137 Query: 131 PHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETE------SEAALQAMVCLLRPVL 184 P + C L AD + + + + L + Sbjct: 138 PSPECFCGRALRADEGLTATAGAMALNLFGRLEAGLALPYQDRVARHLLDILAMAYALAF 197 Query: 185 HQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQY 244 S + V I+ ++R+ L P IA +S R L +FA + V+ Y Sbjct: 198 DTPTSRSSIVSGRCATVKLFIEQHLRDPDLTPCSIAARMKLSSRYLRMIFASENETVSAY 257 Query: 245 IRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRR 298 I RRL+ CA I A + I F WGF+ HF+ F+ R+GM P EYRR Sbjct: 258 ILRRRLEQCARQIADPAWRGHSMTEIAFGWGFNSAPHFTRTFRDRYGMPPREYRR 312 >UniRef50_D0J2C8 Transcriptional regulator, AraC family n=2 Tax=Comamonas testosteroni RepID=D0J2C8_COMTE Length = 326 Score = 207 bits (527), Expect = 5e-52, Method: Composition-based stats. Identities = 50/298 (16%), Positives = 119/298 (39%), Gaps = 5/298 (1%) Query: 6 DNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKG 65 W ++ + G + + ++ L T + ++ + S + RT + Sbjct: 20 AQAVGAWQHWMSTLYGLESDVYGDQHFSARLGTLELGPVGMTRIEASRHRVRRTSASMAR 79 Query: 66 SDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTL 125 + V G+A + Q+ R+ +G + D ++ + E + + + LP++ Sbjct: 80 HSTDFLKIVAPWHGEARVCQNGREAVARSGQWLIYDTTQEYEVLNPEWCEHLIITLPKSR 139 Query: 126 LEQYFPHQKPICAERLDADLPMVQLSHRLLQE-SMNNPALSETESEAALQAMVCLLRPVL 184 E + + + + +++ +++ A+ + ++ +++ L++ L Sbjct: 140 FEDHGRAIDALMGRYVGGSEGVSRIALDMMRGTFAECRAMGQGLAQHVTDSLLQLIQLSL 199 Query: 185 H---QRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVV 241 R + E ++ + ++R+ L + +A S R LY FAD+ L + Sbjct: 200 LDACGRAASLSASELLLGRIKAYVRQHLRDPALSVDAVAAALNCSKRHLYNAFADESLSI 259 Query: 242 AQYIRNRRLDFC-ADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRR 298 +Q+I R+ + + A L + GF+ +H S +FKQ G TP ++R Sbjct: 260 SQHIWAERVALFQRELLSPANRHCTLTELALASGFASGAHLSRLFKQHTGQTPAQFRA 317 >UniRef50_Q82PX9 Putative AraC-family transcriptional regulator n=1 Tax=Streptomyces avermitilis RepID=Q82PX9_STRAW Length = 331 Score = 206 bits (526), Expect = 7e-52, Method: Composition-based stats. Identities = 62/314 (19%), Positives = 113/314 (35%), Gaps = 15/314 (4%) Query: 2 NPAVDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQ 61 + DN F W I + + + + + + + R+ + Sbjct: 13 DVPADNRFDYWWELIGRTRSSEIISAHAADFWAEYRLMELGPVAVWSASFLPSRYRRSPR 72 Query: 62 EVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQ----- 116 V+ SD ++ L G ++ R G D+ L D+SRP L + Sbjct: 73 MVRQSDPETYHLTLLLDGGLALDHAGRTDTFGPRDLHLADSSRPYDLRSTGDREHHVVKG 132 Query: 117 ISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMN-----NPALSETESEA 171 +++ P+ LL + + L + L L P+ + Sbjct: 133 VAVDFPKALLPLPPHLVRGLLGRGLSGREGLGALLTDFLVGLDRQADTLQPSDAPRLGTV 192 Query: 172 ALQAMVCLLRPVLHQRESVQ--PRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRS 229 L + L VL ++ RR + + I N+ + L P IA +S+ Sbjct: 193 VLDLLSAWLAQVLDAETALSQETRRVATAESIRAFIRQNLHDPELSPPVIAAAHHISLSY 252 Query: 230 LYRMFAD--KGLVVAQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFK 286 L+R+F +G VA YIR++RL+ + + + + WGF S F+ F+ Sbjct: 253 LHRIFQQQAQGETVAAYIRSQRLEGACRDLASTSLRTTPIYAVAARWGFLHASDFTRTFR 312 Query: 287 QRFGMTPGEYRRKF 300 +G +P EYR + Sbjct: 313 TAYGRSPKEYRLQA 326 >UniRef50_B8IWN2 Transcriptional regulator, AraC family n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IWN2_METNO Length = 330 Score = 206 bits (525), Expect = 8e-52, Method: Composition-based stats. Identities = 64/309 (20%), Positives = 120/309 (38%), Gaps = 11/309 (3%) Query: 4 AVDNEFQQWLSQINQVCGNFTGR-----LLTERYTGVLDTHFAKGLKLSTVTTSGVNLSR 58 ++ W + + + + E + G L + L+ + + G L+R Sbjct: 14 SLRERKLCWQALVGEHLADVELDASPDIPAGEAFAGTLRIRSFERGTLADIASGGQVLTR 73 Query: 59 TWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQIS 118 T ++ + LSG +EQD RQ AG + L +++RP + + I Sbjct: 74 TADRIRRAKSDAVLFNIILSGHCRLEQDGRQAVPTAGSLFLYESARPYHIETSPDFRTIV 133 Query: 119 LLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN-----PALSETESEAAL 173 +++ R LE+ + + + + + +++ Q + A + T EA + Sbjct: 134 VMIDRGRLERSLGNLRFYTGRAMCSVDTVARIAGSFWQTLSSQLDGVPDAAANTLIEAGI 193 Query: 174 QAMVCLLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRM 233 ++ LR + R E + I E L + IA G+S R L Sbjct: 194 DVVIPALRSMAGDRAEGSEACELTVMRATAFIASAFHRESLTVDDIAAAAGVSTRRLQEC 253 Query: 234 FADKGLVVAQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMT 292 F +KGL + +R RL D + + + I GFSD +HFS F++ +G++ Sbjct: 254 FKEKGLTPMEQLRKHRLKHAHDRLNDGHCQNLSVLSIMSQSGFSDPAHFSRAFRKEYGIS 313 Query: 293 PGEYRRKFR 301 P R + Sbjct: 314 PSAARSASQ 322 >UniRef50_A9D8L4 Transcriptional regulator, AraC family protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D8L4_9RHIZ Length = 311 Score = 206 bits (524), Expect = 9e-52, Method: Composition-based stats. Identities = 64/294 (21%), Positives = 116/294 (39%), Gaps = 9/294 (3%) Query: 9 FQQWLSQINQVCGNFTGRLLTER-YTGVLDTHFA-KGLKLSTVTTSGVNLSRTWQEVKGS 66 F W ++Q + + R + G + +S++ + RT Q+++ Sbjct: 25 FGYWQETVSQAYTALSPEPVDSRPFHGQIKLFELADDASISSIKAGAQIVRRTRQDIQLR 84 Query: 67 DDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLL 126 + FQL GQ+ + Q + +I AG + LLDA+ P ++ + +Q L LP++ L Sbjct: 85 ACEAVFINFQLQGQSTISQRGIEAKIDAGSLVLLDATEPFAMKFDRQFEQACLHLPKSAL 144 Query: 127 EQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPVLHQ 186 E + + + L ++ +L L Sbjct: 145 EVNGIRASEFVGRAVTRQSGFAAPLFSAIDSLTAG-----VPAPHVLPGLMQMLSFGLSN 199 Query: 187 RESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIR 246 + V + N+ L P A +S R L+++FA G+ ++ Sbjct: 200 ARRNAVADQHLVT-VQNFVVHNMGNSDLSPGLTARHFRISTRHLHKLFARDGITFGTFLL 258 Query: 247 NRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKF 300 + RL C I A+ DE ++ + F GF QSHFS F+Q+FG +P + R+ Sbjct: 259 DARLQACRKRIL-ASPDEPVSLVAFAHGFRSQSHFSRAFRQKFGCSPNQLRKSH 311 >UniRef50_A8ICM9 Putative transcriptional regulator n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8ICM9_AZOC5 Length = 346 Score = 205 bits (523), Expect = 1e-51, Method: Composition-based stats. Identities = 69/302 (22%), Positives = 124/302 (41%), Gaps = 8/302 (2%) Query: 6 DNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKG 65 +F ++ + + + + + G+ + S + R+ +++ Sbjct: 24 AEQFGRYHDHMAPIYDVAAEENGKAGFAADMTAYHLGGMLVGASGFSDHAIGRSKRKIAR 83 Query: 66 SDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTL 125 +D +G + + V++ AGDI+L+D RP + + S+ + ++LPR+ Sbjct: 84 TDMDHLLVQLHKTGGLDADAEGNVVRVRAGDISLIDLGRPMDGHAKT-SQTLDVILPRSQ 142 Query: 126 LEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN-PALSETESEAALQAMVCLLRPVL 184 L +K L D M + L A + ++ +A L+ Sbjct: 143 LPDLAQRRKTPHGAVLSGDSLMGGILGDFLLSLARRLDAATPRDAGLLTRAAADLITTCF 202 Query: 185 HQRESVQPRRERQF----QKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLV 240 V +E ++ ID N+ + L P +A E MS SLYR+F +G Sbjct: 203 QSETGVAAAQEGLLLAASERARRYIDANLSKAELVPVRVARELRMSRSSLYRLFEAEGG- 261 Query: 241 VAQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRK 299 +A+YIR RRL + H A ++ I F GFS ++HFS F+ F M P E R++ Sbjct: 262 IAKYIRTRRLTTALYLLTHPAHAGMRIGEIAFRCGFSSEAHFSRAFRSEFDMKPSEARKR 321 Query: 300 FR 301 R Sbjct: 322 AR 323 >UniRef50_C0N2M9 Transcriptional regulator, AraC family protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N2M9_9GAMM Length = 343 Score = 205 bits (523), Expect = 1e-51, Method: Composition-based stats. Identities = 55/304 (18%), Positives = 132/304 (43%), Gaps = 8/304 (2%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLLTE-RYTGVLDTHFAK-GLKLSTVTTSGVNLSRTWQ 61 + I + N + + + ++LS + ++ + L R Q Sbjct: 34 PSQLRLEWLKEVIGKEYANVDITPPNTMPLYNDMLIYPWQQDMRLSPIQSNAITLERLDQ 93 Query: 62 EVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLL 121 E ++ V SGQ +EQ R+V + G+++ DA++ + E +I + + Sbjct: 94 EPTEIAQDCYFAVLLTSGQYKLEQGGREVFLNGGEMSFYDATQSHRITIPEQFSKILISI 153 Query: 122 PRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN-PALSETESEAALQAMVCLL 180 PR LL++ + + A +L + + + ++Q ++ +++ + ++ L Sbjct: 154 PRPLLDKRLNNVGRLTATKLASASGIGAVVASMIQSTVQQLDQMTDVHFQQLSNPILDLF 213 Query: 181 RPVLHQRE----SVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFAD 236 +L + E ++ R ++ I +I+E L ++ G+S+R + +F + Sbjct: 214 TLLLSENEVELSTLSRHRHFALLQIKQFIHLHIKESSLDAAAVSAGVGLSIRYINNLFYE 273 Query: 237 KGLVVAQYIRNRRLDFCADAIRH-AADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGE 295 + + +YI +RL + + + + + GF++ +HFS +F+ R+G++P Sbjct: 274 EQTSLMRYITTQRLALTQSYLSNIIYRNLTITEVAMQCGFNNMAHFSRIFRHRYGVSPRA 333 Query: 296 YRRK 299 YR++ Sbjct: 334 YRQQ 337 >UniRef50_A1BAD0 Transcriptional regulator, AraC family n=1 Tax=Paracoccus denitrificans PD1222 RepID=A1BAD0_PARDP Length = 318 Score = 205 bits (523), Expect = 1e-51, Method: Composition-based stats. Identities = 61/297 (20%), Positives = 109/297 (36%), Gaps = 8/297 (2%) Query: 11 QWLSQINQVCGNFTGRLLTE-RYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDA 69 W + I + G L+ A + LS + T R ++ + Sbjct: 19 HWSAIIADTYFPLHLSYRDPATFQGRLERRSAGPVSLSRLRTEPARYERVPGLIRQGEAE 78 Query: 70 WFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQY 129 + + Q R + G + P +Q + + + + R L + Sbjct: 79 EYLVTIPSLAPVLFRQLGRDITCAPGGFIIERGDEPYRFAYQARNDLLVMKIARGALAER 138 Query: 130 FPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPVLHQRES 189 +CA D + L ++ + + +E ++ + ++ LL L + Sbjct: 139 LRQPDRLCATVFDGRDGLGGLFAETVRRAHAL-SDAEGAADVLGRHLIELLALALDHQAE 197 Query: 190 VQPR-----RERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQY 244 R ++ I N+ + L P +A G+S R L+ +F D VAQ+ Sbjct: 198 TDGGAATVVRAAHLKRAQDAILRNLTDPELSPGTVAAACGISKRYLHDLFGDTDATVAQF 257 Query: 245 IRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKFR 301 IR RL D ++ D LA I + +GF DQ+ FS +F+ FG +P YR R Sbjct: 258 IREARLKAARDMLQMPG-DLSLAAIAYRFGFGDQAQFSRLFRAMFGQSPSSYRAACR 313 >UniRef50_C8NQI1 AraC-type transcriptional regulator n=4 Tax=Corynebacterium RepID=C8NQI1_COREF Length = 335 Score = 205 bits (523), Expect = 1e-51, Method: Composition-based stats. Identities = 68/307 (22%), Positives = 121/307 (39%), Gaps = 13/307 (4%) Query: 5 VDNEFQQWLSQINQVCGNFTGRLLTERY-TGVLDTHFAKGLKLSTVTTSGVNLSRTWQEV 63 D +QW + + R + R ++L+ V + + R+ + + Sbjct: 26 PDYRVEQWEAHNARALIPLDIRTIDGRPMHSEETNLHLPSMRLARVFGTSQIVERSEKFI 85 Query: 64 KGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPR 123 + F G + V + G L DA +P + ++ L + + Sbjct: 86 NDNPTGMMAIFFATEGDSFFFDRGGHVSLRPGQALLYDADQPFLRGFNHGFRENVLTISK 145 Query: 124 TLLEQYFPHQKPICAERL---DADLPMVQLSHRLLQESMNNPALSETESEAA-----LQA 175 P P Q RL++ +++ L+ S Sbjct: 146 ERFRDVAPRSGLKLPMVFEFGPGGSPAEQALGRLVKTTLHRLQLTHVTSTDLPLPGGEDK 205 Query: 176 MVCLLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFA 235 ++ LL P+L + + F + ID ++ L P+ IA G+S R L R+F+ Sbjct: 206 VISLLGPILGSSPNTEAS---LFSLARSYIDLHLTNRHLTPQEIAAAAGVSERHLSRIFS 262 Query: 236 DKGLVVAQYIRNRRLDFCADAIRHAADD-EKLAGIGFHWGFSDQSHFSTVFKQRFGMTPG 294 +G V +YI NRRL F +A+ D ++ IGF +GF+ SHF +++RFGMTP Sbjct: 263 AEGTTVGRYILNRRLTFAHEALTSGQQDALPVSEIGFRYGFASPSHFGRTYRERFGMTPL 322 Query: 295 EYRRKFR 301 + RR+ + Sbjct: 323 QARRESQ 329 >UniRef50_Q0S048 Probable transcriptional regulator n=1 Tax=Rhodococcus jostii RHA1 RepID=Q0S048_RHOSR Length = 285 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 51/251 (20%), Positives = 97/251 (38%), Gaps = 9/251 (3%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRL-LTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 +F W ++ + +TG L T L++S V+ V + R Sbjct: 11 PAGEQFDAWRETVSNAFVPLDAKSYTAGTFTGELLTGVVGSLQVSEVSGGAVEVCRMPDA 70 Query: 63 VKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLP 122 ++ SD + Q+ G ++ QD+R+ + GD ++ D RP + ++ Q+ ++ P Sbjct: 71 IRRSDPGYVKLGMQIRGYCVLTQDDREAALIPGDFSIYDTRRPYQVSFEGDFAQLVVMFP 130 Query: 123 RTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNP------ALSETESEAALQAM 176 L+ + A R+ + L +LL P + ++ S L + Sbjct: 131 HELIHLPPDALNDMTARRVSGRRGIGGLVSKLLVGIAEQPRGVEELSANQQLSNGVLNLL 190 Query: 177 VCLLRPVLHQRESVQPR--RERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMF 234 L L +V P R ++ ID + + L IA +S R+L +MF Sbjct: 191 AAALSEQLGCESNVPPETNRAALLLQIKAFIDARLYDPELSSHLIARAHNISPRNLQKMF 250 Query: 235 ADKGLVVAQYI 245 +G ++I Sbjct: 251 EGEGTTATEWI 261 >UniRef50_B2GIQ7 Putative AraC family transcriptional regulator n=1 Tax=Kocuria rhizophila DC2201 RepID=B2GIQ7_KOCRD Length = 316 Score = 204 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 70/298 (23%), Positives = 123/298 (41%), Gaps = 6/298 (2%) Query: 9 FQQWLSQINQVCGNFTGR-LLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSD 67 QW IN + + L T + L +TTS + RT + V Sbjct: 15 LAQWRETINASFAALEITAPVDSEFRADLTTVELDDVHLFDMTTSAHRVVRTAEMVARDA 74 Query: 68 DAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLE 127 + QL G+A + QD R+ +G G + L A RP L + + + PR++++ Sbjct: 75 GEYLKLSLQLQGRARLRQDGRECVLGPGGLGLYAAYRPYELVYDGPQHSLVMTFPRSVVQ 134 Query: 128 QYFPHQKPICAERLDADLPMVQLSHRLLQESMNN-PALSETESEAALQAMVCLLRPVLHQ 186 + A+R+ + + +++ + + N L + +++ + +L VL Sbjct: 135 LIPAQLDLVTAQRIGQEDGLGRVAVPMFRNLAENMDLLRGPHASKLVRSALDMLVSVLSA 194 Query: 187 ---RESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQ 243 + + Q+ I D++ + L P IA +SVR L+ FA + L VA Sbjct: 195 EVVEPAGAHAGDLLVQQATAYIADHLADPELSPGSIARALYVSVRQLHSRFAAQHLTVAA 254 Query: 244 YIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKF 300 +IR RL + A D+ + I G +D +H S FK +G +P YRR+ Sbjct: 255 HIRAVRLAAIRAELADPAHRDDTVHTISARRGLTDPAHVSKAFKAEYGESPTAYRRRV 312 >UniRef50_Q0SCE6 Transcriptional regulator, AraC family protein n=1 Tax=Rhodococcus jostii RHA1 RepID=Q0SCE6_RHOSR Length = 306 Score = 204 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 56/295 (18%), Positives = 112/295 (37%), Gaps = 4/295 (1%) Query: 10 QQWLSQINQVCGNFTGRLLTE-RYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDD 68 W ++ G RL ++ TG + ++ T++ + LSR+ + + + Sbjct: 6 DSWSEIMSTEFGGLAPRLASDAPVTGAMQAVLLGNVEAFTISGTPQVLSRSPRAARRNPS 65 Query: 69 AWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQ 128 +G+A++ Q +R++ + G + D + P L + ++ + PR Sbjct: 66 ESLKLCAVKTGRAVLHQGDRELVVDRGRAVMYDVALPYELSFTDTWSCSVVTFPRHSFVL 125 Query: 129 YFPHQKPICAERLDADLPMVQLSHRLL-QESMNNPALSETESEAALQAMVCLLRPVLHQR 187 + D L + + + + A + L+ VL Sbjct: 126 TPNEIRECLERTYDVRAGSGALLEHFVTTAVAEGADVDPSAATLLGDAGMSLVSAVLTAP 185 Query: 188 E-SVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIR 246 E P +++ + N+ + L IA MS R+L R+FAD G ++ IR Sbjct: 186 ETRPAPPSSAVRDQILRHVRRNLADPALSVGSIASALHMSPRTLQRIFADYGHTLSAVIR 245 Query: 247 NRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKF 300 RL + + D ++ + +GF D F+ F+ +GMTP + R + Sbjct: 246 RERLASVHRDLTNPNLHDRTISSLASRYGFYDAPAFTRAFRAEYGMTPSDARHQA 300 >UniRef50_B0V5B3 DNA-binding transcriptional dual regulator n=9 Tax=Acinetobacter RepID=B0V5B3_ACIBY Length = 304 Score = 203 bits (518), Expect = 4e-51, Method: Composition-based stats. Identities = 71/304 (23%), Positives = 132/304 (43%), Gaps = 10/304 (3%) Query: 1 MNPAVDNEFQQWLSQINQVCGNFTGRLLTER--YTGVLDTHFAKGLKLSTVTTSGVNLSR 58 MN V + W I VCGNF R + G + +++ + + + R Sbjct: 1 MNQYVSDALLTWTHHIKNVCGNFETDFDGTRNLFIGEVQCFLLGDTEIAFIKNNANKIVR 60 Query: 59 TWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQIS 118 E+ ++ + + + Q SG+ ++E + + GDI L+D S+Y Q QIS Sbjct: 61 KADEIDRVNNRFCFLILQYSGKMLLEYKNETLSLNEGDIVLVDPVETISMYPQGLVSQIS 120 Query: 119 LLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN---PALSETESEAALQA 175 + L R L + + L +L+ + + A A Sbjct: 121 VHLSREKLLKENISTEYFGKLITQNMSGF--LLKNILKNMSAENIKLWYATEDGNAFEDA 178 Query: 176 MVCLLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFA 235 ++ L++P ++ + +K I +N+ + L P+ IA G+S+R LYR+F Sbjct: 179 LIALIKPTINYKNVHSSNN--LMEKAERFIIENLAKPDLTPKLIAEHIGVSLRHLYRLFL 236 Query: 236 DKGLVVAQYIRNRRLDFCADAIRHAADDE-KLAGIGFHWGFSDQSHFSTVFKQRFGMTPG 294 + L + +YI+ +RL+ + + + + I WGF D +HFS +FK+ +G++P Sbjct: 237 QENLSINKYIQLKRLEKVKADLLDKKNKQSSITQIALKWGFWDGAHFSKIFKKTYGISPK 296 Query: 295 EYRR 298 E+R Sbjct: 297 EFRE 300 >UniRef50_B0KKU7 Transcriptional regulator, AraC family n=10 Tax=Pseudomonas RepID=B0KKU7_PSEPG Length = 314 Score = 203 bits (518), Expect = 5e-51, Method: Composition-based stats. Identities = 76/305 (24%), Positives = 140/305 (45%), Gaps = 11/305 (3%) Query: 6 DNEFQQWLSQINQVCGNFTGRLLTER--YTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEV 63 ++W + + Q+CG F L + + G + T GL L+ + T+ N+ R + Sbjct: 8 RQGLERWTTAMQQICGRFETELASNHSLFIGEVSTFSRAGLPLANLRTNAGNIRRLGENP 67 Query: 64 KGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPR 123 DD + V Q +G + + Q QV + G++ L+D+ C + + +SL L R Sbjct: 68 TLDDDQHCFLVSQRAGHSTVSQGGLQVSLAPGELLLMDSVGRCEITPSGLIEHVSLALSR 127 Query: 124 TLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNP--ALSETESEAALQAMVCLLR 181 + +Y P+ ++ + ++ H L+ + + + + +A A + LL Sbjct: 128 EQVRKYVQGSGPMFG-KISSSNACGRMLHVLMDQLCKDGNVSGDGAQGDALQTAFIALLE 186 Query: 182 PVLHQRESVQP-----RRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFAD 236 P + V +ID+++ + L P +AG +SVR LYR+F + Sbjct: 187 PGFERNGEAPGNLGALSGANLRGYVQQVIDESLSQPGLTPANLAGRLNISVRHLYRLFEE 246 Query: 237 KGLVVAQYIRNRRLDFCADAIRHA-ADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGE 295 +G V +YI+ RL AD + + E + I + WGF+D +HFS FK++F +P + Sbjct: 247 EGDSVCRYIQRARLMRSADDLANPFFKGESITSIAYKWGFTDSAHFSRSFKKQFERSPKD 306 Query: 296 YRRKF 300 YR + Sbjct: 307 YRAQA 311 >UniRef50_UPI0001B554AB AraC family transcription regulator n=1 Tax=Streptomyces sp. SPB78 RepID=UPI0001B554AB Length = 336 Score = 203 bits (516), Expect = 8e-51, Method: Composition-based stats. Identities = 63/315 (20%), Positives = 116/315 (36%), Gaps = 19/315 (6%) Query: 6 DNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKG 65 F+QW + + + V+ + + + + + RT + ++ Sbjct: 8 SESFEQWRETMRHTRAAELTSEHADTFAAVVHQTHVGPVSVLKTSFPSIQVRRTQRMIRR 67 Query: 66 SDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQE---------SSKQ 116 D ++ SG+ ++E + AG++ L+ + +P ++ Sbjct: 68 CDQELYHLTLLTSGRGLVETGGAPQPLTAGNLHLVASPQPYDARFRGEPAAGGERAHVDG 127 Query: 117 ISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPA-LSETESEAALQA 175 + + LP ++L +P+ L AD L L A L E+ A Sbjct: 128 VGVDLPMSMLPLPARRVRPLLGRALPADRGAGVLLATFLTGLAAQAALLRPGEAARLSTA 187 Query: 176 MVCLLRPVLHQR------ESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRS 229 V LL L + Q R+ +V + I N+ L P +A +S+ Sbjct: 188 TVDLLSAWLAGQLDIEGSLPPQTRQAVMLHRVKSFIHQNLHHPDLTPSVVAAAHHVSLSY 247 Query: 230 LYRMFAD--KGLVVAQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFK 286 L+R F +G +A +IR +RL + A D + + G S F+ FK Sbjct: 248 LHREFTRDSQGETLAAFIRRQRLAKAYRDLADPALHDLPVHVVAARCGIPQASVFTRAFK 307 Query: 287 QRFGMTPGEYRRKFR 301 GMTP ++RR+ R Sbjct: 308 ATHGMTPSDHRRRAR 322 >UniRef50_A9BNP3 Transcriptional regulator, AraC family n=3 Tax=Comamonadaceae RepID=A9BNP3_DELAS Length = 314 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 67/303 (22%), Positives = 113/303 (37%), Gaps = 12/303 (3%) Query: 2 NPAVDNEFQQWLSQINQVCGNFTGR------LLTERYTGVLDTHFAKGLKLSTVTTSGVN 55 + + F W + + C + L L++S ++ Sbjct: 9 SQEPRHRFDYWHEVVCRHCIPADSHRAQGDAAGPGGFGATLSVRSLGLLEISAMSAPSHR 68 Query: 56 LSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSK 115 R ++ + + L GQA + Q + ++ AG++ L DAS+P Sbjct: 69 WVRNAAHLRLHARDELWLGYLLQGQAEVRQGGQVARLSAGNLVLYDASQPFEFSV-APRD 127 Query: 116 QISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQA 175 + + +PR+ L F L P V +L E++ P ++ A Sbjct: 128 ILLMRIPRSELLNRFARAPLHAGRVLHGHAPAVAPLRAMLGEAIAMPPAPHGDALAQRFG 187 Query: 176 MVCLLRPVLH---QRESVQPRRERQFQ-KVVTLIDDNIREEILRPEWIAGETGMSVRSLY 231 M L L Q +VQPR ER ++ I DN+ L +W+A + +S R++ Sbjct: 188 MALLDVLALALEMQEMAVQPRAERDLHGRIQAFIQDNLGSPELSLQWLAQQHNVSPRTVT 247 Query: 232 RMFADKGLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGM 291 R FA + + RL A+ + F GFSD +HFS F++ FG Sbjct: 248 RAFARRNQTPMGLVWQLRLQASRQALMQGRCS-SVTEAAFAHGFSDAAHFSRAFRKAFGC 306 Query: 292 TPG 294 TP Sbjct: 307 TPR 309 >UniRef50_C5AL79 Putative uncharacterized protein n=1 Tax=Burkholderia glumae BGR1 RepID=C5AL79_BURGB Length = 305 Score = 201 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 71/303 (23%), Positives = 132/303 (43%), Gaps = 10/303 (3%) Query: 1 MNPAVDNEFQQWLSQINQVCGNFTGRLLTER--YTGVLDTHFAKGLKLSTVTTSGVNLSR 58 M P F +W ++ +CG F R + G + GL+++ + T+ ++ R Sbjct: 1 MTPQAAARFARWSDEVLAICGRFQIRPPEHADLFLGDIRRRSLGGLEIADIRTNAGSIRR 60 Query: 59 TWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQIS 118 + DD + + V Q G + ++ + AG++ LLD+++ + Q Q+S Sbjct: 61 QPRRAGSLDDRYCFLVLQREGAVRVGGEQAGFVLEAGEMALLDSAQSFEMRPQGLLHQMS 120 Query: 119 LLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQES---MNNPALSETESEAALQA 175 + LPR + +L QL +L ++ +++ E A +A Sbjct: 121 VHLPREAFDTVARAGNGFG--KLSRRGLSGQLLRDMLLRLTVPADDGDVTQDEGAALREA 178 Query: 176 MVCLLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFA 235 + L R L R + I N+++E +A + G+S R ++R+F Sbjct: 179 LGALSRGALCGEPPGGDAPLRL--RAQRQILMNLQDEDQSVARLARQLGVSPRQVHRLFE 236 Query: 236 DKGLVVAQYIRNRRLDF-CADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPG 294 G V ++I R++ C D +R D + I WGF D +HFS VF+++ G++P Sbjct: 237 GAGESVGRHIMRMRIEASCRDLLRTELRDWTITSIAQKWGFGDAAHFSRVFRRQTGVSPR 296 Query: 295 EYR 297 E+R Sbjct: 297 EFR 299 >UniRef50_B5GLL9 AraC family regulatory protein n=2 Tax=Streptomyces clavuligerus ATCC 27064 RepID=B5GLL9_STRCL Length = 337 Score = 201 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 58/309 (18%), Positives = 106/309 (34%), Gaps = 11/309 (3%) Query: 2 NPAVDNEFQQWLSQINQVCGNFTGR-LLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTW 60 N A + + I++ + + +S + + RT Sbjct: 5 NVAAADRADWYHDVISRTVAPHELTVTDPSAFRARSGGMSLGRIGVSRHFHTEHSSRRTP 64 Query: 61 QEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSK--QIS 118 + ++ D F G + Q +G GD L D S P ++ + Sbjct: 65 RLIRQGDPEHFVLGVITHGAKKISQHRTDTVLGTGDGVLFDTSHPYAVGTPGTGSSGMTF 124 Query: 119 LLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVC 178 L +PRTLL + P + +R + + + + A + L Sbjct: 125 LHIPRTLLSFHAPRLDTVLPQRFPTGHGLAAILRHFIDSLHTHTAECTPQERRILDRTAL 184 Query: 179 LLRPVLHQRE-------SVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLY 231 L + + +V IDD++ + L P +A +S+R+L Sbjct: 185 DLVTGFVAEQTDTWAGAPADTPQRVLLHRVDAFIDDHLGDPRLDPRAVADHHHISLRTLQ 244 Query: 232 RMFADKGLVVAQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFG 290 +F + +A I+ RRLD C + + I WGF + FS F+ +G Sbjct: 245 ALFRTREEGIAASIKRRRLDRCRADLSAPGQAGVPIGVIAARWGFGRPAGFSRAFRDTYG 304 Query: 291 MTPGEYRRK 299 ++P EYR + Sbjct: 305 ISPQEYRNQ 313 >UniRef50_B1GXZ7 Transcriptional regulator AraC family n=4 Tax=Rhodococcus RepID=B1GXZ7_RHOER Length = 326 Score = 201 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 72/300 (24%), Positives = 125/300 (41%), Gaps = 11/300 (3%) Query: 12 WLSQINQVCGNFTGRL--LTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDA 69 W + + +R++G + + +++S V + + R+ +K Sbjct: 19 WADLLREHFVALDVSDIGDGDRFSGAVHSAQLAHVRVSAVQSMEQRIVRSNSLIKSDGAD 78 Query: 70 WFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSK-----QISLLLPRT 124 + G A++ QD+R+ + GD L D +RP + + PR+ Sbjct: 79 YLQIGMIRRGSAVVRQDDRECVLRRGDYVLYDTTRPFDWQIEGHAHDGIWGLEVFTWPRS 138 Query: 125 LLEQYFPHQKPICAERLDADLPMVQLSHRLLQESM--NNPALSETESEAALQAMVCLLRP 182 L + A D + L R L + + + + E + + L++ Sbjct: 139 YLSLSDAEVTSLTAIAFDGHAGLSGLLGRFLHDLASVRMTSDASGDEEEVVNEIGNLVKS 198 Query: 183 VLHQRESV-QPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVV 241 VLH RR ++ +++ID I + L P IAG +S+R L+R FA+ G V Sbjct: 199 VLHTTARPITSRRTSLYESALSVIDARIADPALSPVDIAGSVKVSIRQLHRAFAEHGTTV 258 Query: 242 AQYIRNRRLDFCADAIRHAAD-DEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKF 300 ++ IR+RRLD C I + L I WGF+D + FS FK FG++P YR + Sbjct: 259 SRSIRSRRLDGCRREIVQRHGVERSLTQISHRWGFTDLAAFSRAFKAEFGISPRRYRSQA 318 >UniRef50_C3VA09 Putative transcriptional regulator n=1 Tax=Pseudomonas nitroreducens RepID=C3VA09_9PSED Length = 325 Score = 201 bits (512), Expect = 2e-50, Method: Composition-based stats. Identities = 72/300 (24%), Positives = 126/300 (42%), Gaps = 6/300 (2%) Query: 5 VDNEFQQWLSQINQVCGNFTGR-LLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEV 63 D ++W ++ L+ E + + + L+ + + Sbjct: 19 PDAAVRRWEEVLSDGIIPMEVSSLVGEGFEAAWRRYGVGPVDLNFLQAKPQRVHHALSSA 78 Query: 64 KGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQES-SKQISLLLP 122 S D + +F SG + RQV+ G I LLD +RP L + + ++ LP Sbjct: 79 SQSADDSYELLFVRSGSLEFKHQRRQVKATTGSIVLLDNARPYDLEMNDPVTDCFAVHLP 138 Query: 123 RTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNP-ALSETESEAALQAMVCLLR 181 L ++ P+ K I A + A LL+ S + L+ Sbjct: 139 DVWLRKWIPYPKDIIASPITAVNGWGAPLVALLETISTLGLEQSPMPRGVVADQLGSLIA 198 Query: 182 PVLHQRESVQPRRER--QFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGL 239 ++ ++ V+ R R +K+ + D EE L PE +A + G+S R L+ +FA G Sbjct: 199 MLIASQQEVRQDRHRDELLRKLKQTLADRSHEEGLTPEVVAQQNGISKRYLHLLFAQVGT 258 Query: 240 VVAQYIRNRRLDFCADAIRHAADDE-KLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRR 298 ++ + + RLD + +R D +++ I + GF DQSHF+ FK+RF +P EYR+ Sbjct: 259 TFSKVLLDIRLDKASALLRDCRYDRYQMSDIAWDCGFVDQSHFARTFKRRFLRSPLEYRK 318 >UniRef50_A5EQH2 Transcriptional regulator, AraC family n=3 Tax=Bradyrhizobium RepID=A5EQH2_BRASB Length = 777 Score = 201 bits (512), Expect = 2e-50, Method: Composition-based stats. Identities = 60/304 (19%), Positives = 122/304 (40%), Gaps = 12/304 (3%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEV 63 A W ++ V + A GL LS ++ ++ V Sbjct: 12 AEGERPDAWRDVLSAVGLQPATKTAFYDGHATASHRTAPGLALSRLSAGSQSV----AAV 67 Query: 64 KGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPR 123 + + + + A++ + + +G + LL +R S+ +Q + I L + Sbjct: 68 PQAHEDLPIALLAIEDGAVLRSGDSHRIVPSGHLLLLPRTRDWSIAFQRDLRAIVLSVTS 127 Query: 124 TLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN-PALSETESEAALQAMVCLLRP 182 L + ++ A + + + R ++ + LS+ E Q++V LL Sbjct: 128 DALHGRISGKLKFAKPQVIAPIGLADVVCRTIEATARTLETLSDAEWSTVAQSLVDLLLT 187 Query: 183 VLHQRE------SVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFAD 236 + H++ + ++ I+ + + L P +A G+S R L ++F Sbjct: 188 LAHRQAVPVSEAGSSATQAATLHRICQSIERRLDDATLTPASVAQAEGISERYLQKLFES 247 Query: 237 KGLVVAQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGE 295 G + Y+R RRL + + A ++ I + WGF+D +HFS F+ RFG++P E Sbjct: 248 AGDNFSHYVRERRLQRAWTDLSNPAEAHHSISEIAYRWGFADSAHFSRSFRARFGLSPRE 307 Query: 296 YRRK 299 +R++ Sbjct: 308 FRQQ 311 >UniRef50_A5EI80 Transcriptional regulator, AraC family n=2 Tax=Bradyrhizobium RepID=A5EI80_BRASB Length = 335 Score = 201 bits (511), Expect = 3e-50, Method: Composition-based stats. Identities = 70/312 (22%), Positives = 123/312 (39%), Gaps = 16/312 (5%) Query: 5 VDNEFQQWLSQINQVCGNFTGRLLTE-RYTGVLDTHFAK------GLKLSTVTTSGVNLS 57 +F + I Q N T + + + ++ VT + Sbjct: 19 PAEQFSYYREAICQAFMNLTPEPARGIGFAAEVQSIGIGRDGKNTTGAINRVTFPEHVVR 78 Query: 58 RTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQES--SK 115 R+ ++ S FY +L+G+ + QD+ +V + AG + + D+ R +L Sbjct: 79 RSRADIAASAQRCFYLNLKLAGRCTIVQDDCEVSLSAGQVGIFDSDRTFALQHDRGPSLG 138 Query: 116 QISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNP-ALSETESEAALQ 174 IS +P L P+ I RL D + L + N L+ ++ A Sbjct: 139 VISFRVPAEALFSRLPNAPDIAPMRLSDDPCVGALIVETARSLNANALRLAADDTAALFD 198 Query: 175 AMVCLLRPVL-----HQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRS 229 ++ L + + + + + I + +RE L +A G+S R Sbjct: 199 VLLDLAALGVSRSFRREAHATTSFADATTLALRRAIHERLREPGLTVATVARMVGISERY 258 Query: 230 LYRMFADKGLVVAQYIRNRRLDFCADAIRHA-ADDEKLAGIGFHWGFSDQSHFSTVFKQR 288 ++++ A G ++ + RRLD A +R + I F WGFSD SHF+ FKQR Sbjct: 259 VHKLLARAGTSFSELVMERRLDGAARDLRDPCCAARDIGSIAFDWGFSDLSHFTRRFKQR 318 Query: 289 FGMTPGEYRRKF 300 FGM P ++R + Sbjct: 319 FGMRPRDWRAQL 330 >UniRef50_A9E8K4 TRANSCRIPTIONAL REGULATOR, ARAC FAMILY n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9E8K4_9RHOB Length = 314 Score = 200 bits (510), Expect = 4e-50, Method: Composition-based stats. Identities = 70/294 (23%), Positives = 125/294 (42%), Gaps = 9/294 (3%) Query: 13 LSQINQVCGNFTGRLLT--ERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAW 70 + I Q+CG F G+ G + + V+ +RT ++ + Sbjct: 18 RNDILQICGAFEVEPARREGPSHGLARKREMGGFEAALVSLDAQEAARTQTCIRRDPGEY 77 Query: 71 FYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQES-SKQISLLLPRTLLEQY 129 F+ + Q G+ ++ Q+ + GD+ ++DA+RP + + QIS+ LPR + Sbjct: 78 FFMLVQDVGECVVHQNGSSTLLRPGDMYIVDATRPSKFVYDGQLAHQISVHLPRDEMIGR 137 Query: 130 FPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPVLHQRES 189 F +D + P+ +L + M+ P + + +A L+ LH+R S Sbjct: 138 FGGICD-GGVAIDRNDPLWLALRAVLYKMMHCPPETGLQ---LSEAFYGLMGAYLHERRS 193 Query: 190 VQ-PRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNR 248 R + ++ + L+ + R+ P +A G+S+RSL R F G Q + Sbjct: 194 QTLDARGQIIERALQLMTRHYRDPEFGPSALALHLGVSLRSLQRYFEPLGETPGQRLLQL 253 Query: 249 RLDFCADAI-RHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKFR 301 RL + R + + + GF+D SHF F+QR+GMTPG + R Sbjct: 254 RLTQAHAELSRRGGMEVSVTDCAYGCGFNDLSHFYRAFRQRYGMTPGAVVAQVR 307 >UniRef50_B9JMB3 Transcriptional regulator protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JMB3_AGRRK Length = 333 Score = 200 bits (509), Expect = 5e-50, Method: Composition-based stats. Identities = 61/309 (19%), Positives = 110/309 (35%), Gaps = 13/309 (4%) Query: 2 NPAVDNEFQQWLSQINQVCGNFTGRLLTER---YTGVLDTHFAKGLKLSTVTTSGVNLSR 58 + A F W I + L R + G + L + + R Sbjct: 18 DVAPAERFDYWRDSICAAFDPMSPELQRNRRATFKGQISAWQLGESALMEIKAEHHDTGR 77 Query: 59 TWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGA-GDITLLDASRPCSLYWQE--SSK 115 + +++ + + Q + +A + D + I G + L DA R + Sbjct: 78 SRKDIAQGSRDYVFIYRQQA-EAWFDFDYQPGFISGFGSLALGDADRAFTTGPTRARPFH 136 Query: 116 QISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN-PALSETESEAALQ 174 L +PR LL + I + A + L + P L+ E +L Sbjct: 137 HYVLKVPRELLRPALANADDIATTVVSAPRGIGALLLAYFDAFVTEVPYLAPEEQTTSLN 196 Query: 175 AMVCLLR----PVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSL 230 A+ L V + Q + Q + I N + L P +A G+S+R L Sbjct: 197 ALASLAAVAHGRVARDYDPRQALQTAQLRLAKEFIARNAVDPRLSPMLVARALGISIRHL 256 Query: 231 YRMFADKGLVVAQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRF 289 +R+F G V+++I RL+ +R + + GF++ + F ++ + Sbjct: 257 HRLFEVTGDTVSRHILRCRLEVARSRLRSPGFSHVTILELALECGFTNLATFYRAYRIAY 316 Query: 290 GMTPGEYRR 298 G+ P EYRR Sbjct: 317 GLPPAEYRR 325 >UniRef50_Q2IYF7 Transcriptional regulator, AraC family n=1 Tax=Rhodopseudomonas palustris HaA2 RepID=Q2IYF7_RHOP2 Length = 326 Score = 200 bits (509), Expect = 6e-50, Method: Composition-based stats. Identities = 65/306 (21%), Positives = 119/306 (38%), Gaps = 12/306 (3%) Query: 6 DNEFQQWLSQINQVCGNFTGRL-LTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVK 64 W + +V + +R G L L LS + R + K Sbjct: 15 SESIAAWRQAMAEVYYRLDIQARHDDRVVGELIDVQLGSLGLSNFKADAQRVIRRKESAK 74 Query: 65 GSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRT 124 F +F + EQ R G + LL+++ + + S+ I++ + R Sbjct: 75 IDGSEDFVFLFPIRKGLQYEQRGRSGLAMPGTVFLLNSAENYVIDVPDGSENITIKVDRR 134 Query: 125 LLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPVL 184 LL +CA A+ +V + L + +N P ++ Q+++ L+ +L Sbjct: 135 LLIDRVKGIDGLCASMNIANSQLVPVVTTLGAQLLNLPPGEH--ADRLQQSVIDLICLML 192 Query: 185 HQRESVQP-------RRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADK 237 RES Q + ++ + N+ + L P+ A E +SVR L+++F Sbjct: 193 DLRESAQDKTFIRQTLASSLYHRIDAYLQRNLHDCDLSPDHAAREHKISVRYLHKVFHFH 252 Query: 238 GLVVAQYIRNRRLDFCADAIRHAADDEKL--AGIGFHWGFSDQSHFSTVFKQRFGMTPGE 295 G Q + RL I + + + GF+ QS+FST +++RFG+TP + Sbjct: 253 GTSFGQRLLELRLQRAHYVISRHGATTTINLGQVAYECGFTSQSYFSTCYRKRFGLTPRQ 312 Query: 296 YRRKFR 301 + R Sbjct: 313 TGKSDR 318 >UniRef50_B7WVN7 Transcriptional regulator, AraC family n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WVN7_COMTE Length = 326 Score = 200 bits (509), Expect = 6e-50, Method: Composition-based stats. Identities = 57/301 (18%), Positives = 103/301 (34%), Gaps = 5/301 (1%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRL-LTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 QW + E L ++ + + + RT Q Sbjct: 18 PASQRLDQWEAYNASFLVGLRCSSYADEGLNARQSNMRLGQLAMANIDGNAHVIERTPQL 77 Query: 63 VKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLP 122 V+ + LS A Q+ + + GD+ + D + Q + P Sbjct: 78 VRQHPKESVFVSLVLSSGAFFYQEHSCIHLAPGDLVIYDTRHAYLFGFTHQMHQFLVDTP 137 Query: 123 RTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSE--TESEAALQAMVCLL 180 + + + ++ + Q+ + N + + LL Sbjct: 138 ADWFYRNCSRAQLPGPICVSGAAGSGRVLNHAFQKLVGNAMARPEGVDQDRLQFEACDLL 197 Query: 181 RPVLHQRESVQPR-RERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGL 239 R +L + R ID+++ L +A +G+S+R L RM +G Sbjct: 198 RTMLAGEAAGSSALRASHLLAARAHIDEHLHRHSLDASEVAAASGVSLRHLNRMLQAEGH 257 Query: 240 VVAQYIRNRRLDFCADAIRHAADDE-KLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRR 298 V + I RRL+ A +R AA +A I + GF+ Q+HF+ F+ GMTP + R Sbjct: 258 SVTELILIRRLERAAIELRQAALGRYSIAEIAYRCGFASQAHFARRFRSHHGMTPTQMRE 317 Query: 299 K 299 + Sbjct: 318 Q 318 >UniRef50_A6X8D5 Helix-turn-helix-domain containing protein AraC type n=1 Tax=Ochrobactrum anthropi ATCC 49188 RepID=A6X8D5_OCHA4 Length = 340 Score = 199 bits (508), Expect = 6e-50, Method: Composition-based stats. Identities = 71/300 (23%), Positives = 115/300 (38%), Gaps = 9/300 (3%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEV 63 + W V L + + +D A L TV +SG R + Sbjct: 19 PLHQRIPLWRDSATSVWDV--SELTYDSFYANVDAFHAGDLMFGTVRSSGQTTERVKSRI 76 Query: 64 KGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPR 123 ++ F + G+ + R+ GD+ ++D ++P E + L+LPR Sbjct: 77 AVDSLDYYMLQFYVFGKRSAQARGREEIAQQGDLLIVDMTQPLKTVSTE-YQSFDLVLPR 135 Query: 124 TLLEQYFPHQKPICAERLDADLPMVQLSHRL-LQESMNNPALSETESEAALQAMVCLLRP 182 L + RL A P+ L L P ++ ++ A + L Sbjct: 136 RLFDPLLAQPDGYGGSRLAAQEPLTALLRSHVLALYAAGPKMTPAQAMAMQGPTLALAAA 195 Query: 183 VLHQ---RESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGL 239 VL+ E P R + V I+DN+ + L +A S +LYR+ Sbjct: 196 VLNGVVTEEQAVPVRTAAWLAVRRYIEDNLADLTLSSASVAQHFAFSRATLYRIMEPVHG 255 Query: 240 VVAQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRR 298 + Y+R RRL C D + H A ++ I WGF++ FST+F + FGM P +YR Sbjct: 256 -FSSYVRQRRLYRCRDDLVHPACRHLSVSEIAISWGFANAQTFSTLFSRHFGMPPRDYRE 314 >UniRef50_A3KKG5 Putative transcriptional regulator n=1 Tax=Streptomyces ambofaciens ATCC 23877 RepID=A3KKG5_STRAM Length = 338 Score = 199 bits (508), Expect = 7e-50, Method: Composition-based stats. Identities = 68/303 (22%), Positives = 118/303 (38%), Gaps = 11/303 (3%) Query: 6 DNEFQQWLSQINQVCGNFTGRLLTERY-TGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVK 64 + W +++ R G + ++L V L+RT + Sbjct: 13 RDPLGHWQEAVSRALVPSHVTGRDGRPPGGRITAASLGAVRLCAVEGDAQRLTRTSAHIA 72 Query: 65 GS---DDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLL 121 + +A+ SG A + QD R + GD+ D SRP ++ +LL Sbjct: 73 HARGASEAFLVIGVLTSGTATLMQDGRHASVDEGDLMFYDTSRPYAVDHPGRFACSLVLL 132 Query: 122 PRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLR 181 PR L + + + A + + L +++ A L A V L Sbjct: 133 PRGALLLPDEQVRRVTGSAVTASRGVAAVLAPFLASLVSSAPACPPAVAAHLAAAVVDLA 192 Query: 182 PVL------HQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFA 235 L H RER + + ID ++ + L P+ +A +SVR L+R+F Sbjct: 193 TTLVADRTAHALPGPDTGRERLVRCIREHIDHHLPDPALSPQSVARAHHISVRYLHRLFE 252 Query: 236 DKGLVVAQYIRNRRLDF-CADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPG 294 ++G+ V + I+ RRL+ + R +A + WGF +HFS F+ +G +P Sbjct: 253 EEGVTVRRLIQRRRLEESARELARGGTTAPTVASVARRWGFVSPAHFSRAFRGLYGHSPR 312 Query: 295 EYR 297 E+R Sbjct: 313 EWR 315 >UniRef50_C3KC85 Putative AraC family regulatory protein n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3KC85_PSEFS Length = 320 Score = 199 bits (508), Expect = 8e-50, Method: Composition-based stats. Identities = 72/303 (23%), Positives = 132/303 (43%), Gaps = 12/303 (3%) Query: 9 FQQWLSQINQVCGNFTGRLLTER--YTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGS 66 + W + CG+F L R + G + H GL L+ + T+ + R Sbjct: 11 LETWTRDLRAACGHFDTELAFNRSLFIGEVSKHSRGGLSLANLRTNAGLIKRERPNADHD 70 Query: 67 DDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLL 126 D + V Q SG + Q+++ +Q+ GD+ L+D++ + + SL L R + Sbjct: 71 MDQHCFLVSQRSGYCQITQNDQVIQLAPGDMLLMDSTGSIEISPFGLIEHASLALSRHEV 130 Query: 127 EQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSET---ESEAALQAMVCLLRPV 183 + P ++ + ++ H L+ + + E+EA A V LL Sbjct: 131 CKQLGGA-PKTFGKISSTKACGRMLHVLMDQLCREGLEGQDSIEEAEALQAAFVSLLGSA 189 Query: 184 LHQRESVQP-----RRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKG 238 ++ + V +ID+++ + L P +A +SVR LYR+F ++ Sbjct: 190 FELHDAPGDCAASLQGSNLRSYVQKVIDESLTQPGLSPVGLANRLNISVRHLYRLFEEQD 249 Query: 239 LVVAQYIRNRRLDFCADAIRHA-ADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 V +YI+ RL AD + + E + I + WGF+D +HFS FK++F ++P ++R Sbjct: 250 DSVCRYIQRARLKRSADDLTNPFLKRESITSIAYKWGFTDSAHFSRSFKKQFDLSPKDFR 309 Query: 298 RKF 300 Sbjct: 310 STH 312 >UniRef50_D0IZV7 Transcriptional regulator, AraC family n=1 Tax=Comamonas testosteroni CNB-2 RepID=D0IZV7_COMTE Length = 338 Score = 199 bits (508), Expect = 8e-50, Method: Composition-based stats. Identities = 65/301 (21%), Positives = 116/301 (38%), Gaps = 5/301 (1%) Query: 1 MNPAVDNEFQQWLSQINQVCGNFTGRLL-TERYTGVLDTHFAKGLKLSTVTTSGVNLSRT 59 + + W + T +L + + + L L+ V ++ RT Sbjct: 8 LAIPARLRREFWRDICARAFVPMTPQLRRADDFRAAMVHRTIDCLALNEVRGPAHDMWRT 67 Query: 60 WQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISL 119 ++ + +G A + Q+ ++V++G + L D+ RP L ++ +SL Sbjct: 68 AADLSCGGSPVLFVNLYRTGNARIVQNGQEVEVGPQRLLLFDSCRPFKLQHSVATDLLSL 127 Query: 120 LLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCL 179 +P LL RL P + L +++ S + + Q+MV L Sbjct: 128 AVPHALLGDRIVQALEEMPWRLPGTAPALLLMNQMQALSKWQADIQAPDGACIAQSMVSL 187 Query: 180 LRPVLH---QRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFAD 236 LR ++ + + P R KV LI + + P A E G+SVRSL+ A Sbjct: 188 LRALMPEGLEPRAAPPHRRHARAKVAALIGRHYADPDYSPLRAAAEIGVSVRSLHAWLAG 247 Query: 237 KGLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEY 296 G + RL+ ++ A + GF+ +H S F++RFGM P + Sbjct: 248 DGTSFGAELWGYRLERVRTLLK-AEPQLSIQEAASRCGFASCAHLSRRFRERFGMAPKAW 306 Query: 297 R 297 R Sbjct: 307 R 307 >UniRef50_C4WP68 Helix-turn-helix domain-containing protein n=2 Tax=Ochrobactrum intermedium LMG 3301 RepID=C4WP68_9RHIZ Length = 376 Score = 199 bits (507), Expect = 9e-50, Method: Composition-based stats. Identities = 79/305 (25%), Positives = 125/305 (40%), Gaps = 14/305 (4%) Query: 8 EFQQWLSQINQVCGNFTGRLLT-ERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGS 66 W V + E G + + + + TV+ +G R + + S Sbjct: 52 RNDFWREATRPVFDTMPLSPDSKEPLEGAISSRPLGSIAIGTVSFNGQRYIRDHRTIVHS 111 Query: 67 DDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLL 126 D ++ SG+ + + V+ GDI LD S+ S+ ISL + R L Sbjct: 112 DLDYYLIQLFTSGKMNGDFNGLGVRADVGDICFLDLSKAFKSEVDAGSR-ISLAVSRRDL 170 Query: 127 EQYFPHQKPICAERLDADLPMVQLSHRLLQESMN-NPALSETESEAALQAMVCLLRP--- 182 E+ + + L D PM +L L+ + +LS E+ A+ +A++ LL Sbjct: 171 EKVIG-PRSLHGVVLRGDQPMTRLIATYLKGIRSLERSLSPVEALASEEALIALLAGAVK 229 Query: 183 --VLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLV 240 L E Q+V+ ID NI E+ L PE I + +S LYR FA+ G Sbjct: 230 GDALESLEDYPSMSIALRQRVLAFIDQNIGEQELSPELIQQKLRVSRSHLYRAFAEDGG- 288 Query: 241 VAQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEY--- 296 VA+ IR+RRLD + + + I + GFS + F+ RF MTP E Sbjct: 289 VAKIIRDRRLDEAFKQLTKPSKQSRSVRQIAYSLGFSSGNQLLRGFRARFDMTPKEAQIE 348 Query: 297 RRKFR 301 R + + Sbjct: 349 RERLQ 353 >UniRef50_B4EG24 AraC family regulatory protein n=12 Tax=Burkholderia RepID=B4EG24_BURCJ Length = 326 Score = 199 bits (507), Expect = 9e-50, Method: Composition-based stats. Identities = 58/299 (19%), Positives = 111/299 (37%), Gaps = 7/299 (2%) Query: 2 NPAVDNEFQQWLSQINQVCGNFTGR-LLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTW 60 + + W + L GL ++ ++ + R+ Sbjct: 16 DVPARDRMAYWDAFNAATLVGLRCSSLSPAGLEVEKTDIALPGLGIADISGQDHVIERSP 75 Query: 61 QEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLL 120 V+ + LSG+A Q +R + AGD+ + D P + +Q+ + Sbjct: 76 ALVRQLPKESLFACQILSGRAYFIQRDRCLLAEAGDVVVYDTRVPYLFGFLTPMRQLLID 135 Query: 121 LPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN--PALSETESEAALQAMVC 178 +P T L+ + R+ + L+ S+ A E ++ + Sbjct: 136 IPITTLDDRLDAELAALPLRIAPKPGAGAMLGATLRASVERFMKAPVERDAARFAEHTRT 195 Query: 179 LLRPVLHQRESVQPRRERQFQ---KVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFA 235 L+ ++ + I ++ E L P+ +A G+S+R L R+FA Sbjct: 196 LIAALVDAEVNGVGASRASLSYLLTAKQYIATHLGEPELGPQAVADAVGLSLRHLGRLFA 255 Query: 236 DKGLVVAQYIRNRRLDFCADAIRHAADDE-KLAGIGFHWGFSDQSHFSTVFKQRFGMTP 293 +G + Q+I + RL + A + + I F WGFS Q+HFS ++R+G +P Sbjct: 256 AEGESITQHIWSERLSHAHRELTDARLRKTSIGEIAFRWGFSSQAHFSRAIRERYGASP 314 >UniRef50_C5CTZ5 Transcriptional regulator, AraC family n=1 Tax=Variovorax paradoxus S110 RepID=C5CTZ5_VARPS Length = 324 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 62/306 (20%), Positives = 111/306 (36%), Gaps = 10/306 (3%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLL-TERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 W+ + + + L++ + ++ V S ++ R + Sbjct: 18 PPAQRLDYWIGAVCEGFLEMDVTSSLAGSFGATLESAPLGAIGVNRVRGSAQDVYRRRRA 77 Query: 63 VKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLP 122 + S ++Y + + + QD R ++ GD+ L+D+ R L +S+ +SL LP Sbjct: 78 IAQSRSNYYYLLCKTDSPWVAVQDGRSARMLPGDLVLVDSRRCYELRLLQSADTLSLELP 137 Query: 123 RTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAAL--------Q 174 +E + P A R+D ++ Q+ AL A L Sbjct: 138 TAWVESWLPDAGGQVARRIDGQSGWGRVLSGFAQQLSPQGALKPPLPAALLTDHLGGLLA 197 Query: 175 AMVCLLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMF 234 + R ++V+ + E L +A G+S RSL+R Sbjct: 198 LAAGTACDAGGSAAPSESARAALRRRVLDATRERHAEPGLTAAGVARGLGISERSLHRCL 257 Query: 235 ADKGLVVAQYIRNRRLDFCADAIRHAADDE-KLAGIGFHWGFSDQSHFSTVFKQRFGMTP 293 + A + R+ + A D +A IG G +D SHF F + GMTP Sbjct: 258 CEGSTTFAAALTGFRMQVARRMLGDARFDRLSIAEIGLRVGLADASHFVRQFSRHLGMTP 317 Query: 294 GEYRRK 299 G +RR+ Sbjct: 318 GAWRRQ 323 >UniRef50_UPI0001B58708 AraC family transcription regulator n=1 Tax=Streptomyces sp. C RepID=UPI0001B58708 Length = 328 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 63/306 (20%), Positives = 116/306 (37%), Gaps = 13/306 (4%) Query: 6 DNEFQQWLSQIN-QVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVK 64 ++ W S + + + + L+ + + +R ++ Sbjct: 14 AQRYESWESMASQSLFRSRFTGPHLHDFLARSSALDLGNLQTFAQSLPPLEANRPPALIR 73 Query: 65 GSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYW----QESSKQISLL 120 +D + G + Q R V G GD L D+SRPC + + + + Sbjct: 74 QADPEVVHLWLTRRGLLGLSQSGRDVMAGEGDFVLYDSSRPCRGFAKAPDGQDIAGVIVQ 133 Query: 121 LPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNP-----ALSETESEAALQA 175 +PR LL + + R+ + + L L + M + A + A L Sbjct: 134 VPRALLPLHPNTLDALTITRIPGNTAIGTLLRTYLTDLMAHAPSYGKADAPRLGSATLDL 193 Query: 176 MVCLLRPVLHQRE--SVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRM 233 + LL +++ R ++ I + E L P IA +SVR L+++ Sbjct: 194 LTVLLARTARDGRCLTLEARHTALRARIGHFIQQRLAEPDLTPASIAAAHRISVRYLHKL 253 Query: 234 FADKGLVVAQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMT 292 + D + V+ IR+ RL+ + ++ I WGF + +HFS F+ +G+T Sbjct: 254 YQDDRMTVSALIRHTRLERIRRDLSDPRLGARCVSAIAARWGFPEPAHFSRAFRSAYGVT 313 Query: 293 PGEYRR 298 P EYRR Sbjct: 314 PSEYRR 319 >UniRef50_Q28K70 Transcriptional regulator, AraC family n=1 Tax=Jannaschia sp. CCS1 RepID=Q28K70_JANSC Length = 332 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 58/298 (19%), Positives = 124/298 (41%), Gaps = 6/298 (2%) Query: 5 VDNEFQQWLSQINQVCGNFT-GRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEV 63 +W +++ + + G + L +S VT++G + R + + Sbjct: 30 PHEGLTKWADGLDEAFVQLEPVATTGDGFYGHIQQTSTAELDVSVVTSTGHEIRRLDRHI 89 Query: 64 KGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPR 123 + Y G++ + Q + V D++++D P S+ + + +S+ +P Sbjct: 90 RHRSADLLYVNILGRGRSEVSQRD-TVVAAPMDVSIVDPRAPYSIRQEAPFQLVSIAVPP 148 Query: 124 TLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPV 183 +E+ H + R A + + L + + + + + Q + L + Sbjct: 149 DWVEREARHCHFLS--RTAAGRELSSVVWGLAKMLLAIKPDQDGLATSLAQQIHHSLALL 206 Query: 184 LHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQ 243 S R + + + + + LR E +A + G+SVR ++++F G V++ Sbjct: 207 PEMAGSDATPRVS-VAMLQSYVQRHFSQPDLRAEHLARQFGISVRRVHQLFEPTGHTVSE 265 Query: 244 YIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKF 300 +I + RL AD + AA ++ I + G+SD S+F+ FK+R+G +P YR Sbjct: 266 FINDLRLARAADCLGDAALARRTISEIAWQVGYSDPSYFTRRFKRRYGCSPRAYRAAH 323 >UniRef50_B5GUE4 AraC family regulatory protein n=1 Tax=Streptomyces clavuligerus ATCC 27064 RepID=B5GUE4_STRCL Length = 327 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 68/307 (22%), Positives = 119/307 (38%), Gaps = 14/307 (4%) Query: 5 VDNEFQQWLSQINQVCGN-FTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEV 63 ++ F+ W I+Q + + ++L+T++ + RT + Sbjct: 13 PEHRFEWWRDLISQDVAPTRITTDHAKDFPATAGMAQLGAVQLTTMSFPAIRSERTPALI 72 Query: 64 KGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSK-----QIS 118 + SD + L + + Q + ++ AGD+ L S P S I Sbjct: 73 RYSDPEDYQLTLILGTEMWISQARNEARMAAGDLVLWSTSLPFDGRGLAGSHNGISKAII 132 Query: 119 LLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVC 178 L LPRT L + A + + + R L + E + A + Sbjct: 133 LHLPRTGLPLPTAKVDHLLANAVPGRTGIAGILARHLLGVAEEASHLEGPAAAQVGIATW 192 Query: 179 LLRPVL-------HQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLY 231 L R + R + ++ ID N+ + L P IA +SVR+L+ Sbjct: 193 ELATAFLGHWADARDRVPPESRDRMRLARIDAFIDANLSDPHLTPAGIAAYHHLSVRTLH 252 Query: 232 RMFADKGLVVAQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFG 290 +F D+ V+ IR RRL C + A + + I WGF++ + FS +F+ +G Sbjct: 253 WLFRDREQTVSATIRRRRLRRCCAELTAARYAAQPIHTIAARWGFTNAAAFSRIFRTEYG 312 Query: 291 MTPGEYR 297 +TPGE+R Sbjct: 313 ITPGEFR 319 >UniRef50_Q4KBB6 Transcriptional regulator, AraC family n=9 Tax=Pseudomonas RepID=Q4KBB6_PSEF5 Length = 348 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 51/302 (16%), Positives = 107/302 (35%), Gaps = 10/302 (3%) Query: 5 VDNEFQQWLSQINQVCGNFTGRL-LTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEV 63 +D W + D ++L+ + + + R + Sbjct: 19 LDQRLAFWEDYNASTLVGLKCNSYAEGGFAASQDNLQLSAMRLARIVGNEHVVERDTSMI 78 Query: 64 KGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPR 123 +G + + QD + G++ + +P + + +Q +P+ Sbjct: 79 RGVPKESIFVSLVTGSGSFFYQDGACQVLEPGELVVYRTDKPYLFGFSGAMRQFIFDIPQ 138 Query: 124 TLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN------PALSETESEAALQAMV 177 + + R + + +L R L E A +E E A + + Sbjct: 139 QQFAERCLKRFD-RPLRTSVESGVQRLLLRTLGERTRGFFQQPLCAEAEAYQEQAFELLA 197 Query: 178 CLLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADK 237 ++ + +R + I + + + L E +A +TG+S R L R+FA + Sbjct: 198 SIIAGHVGER-PINALSASYLLAAKQCIHEQLADPTLSCERVAAQTGISTRHLARLFALE 256 Query: 238 GLVVAQYIRNRRLDFCADAIRHA-ADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEY 296 + +++I +RL + + ++ I + GF+ Q+HF+ FK RF TP E Sbjct: 257 ETLPSRFILEKRLQQARQLLCSSQGAGLDISEIAYRHGFASQAHFARAFKSRFQQTPSEA 316 Query: 297 RR 298 R Sbjct: 317 RA 318 >UniRef50_UPI0001B557E7 AraC family transcription regulator n=1 Tax=Streptomyces sp. C RepID=UPI0001B557E7 Length = 347 Score = 198 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 66/304 (21%), Positives = 112/304 (36%), Gaps = 11/304 (3%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRL-LTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 A + F + ++ + + ++LS VT S V+ RT Sbjct: 12 ARQDRFDWFCETVSSHVMPVRLSSRHAADFRADITELDLGVVRLSAVTCSPVSSRRTPTH 71 Query: 63 VKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYW-QESSKQISLLL 121 V+ D G + Q + + G + L D SRP E+ + + + Sbjct: 72 VRQGDPEHLQLALLTRGAVRISQRGSESVVSGG-LVLTDTSRPSEAAAADETLTSVVVQI 130 Query: 122 PRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLR 181 PR L + A L A + ++ + E L A+ L Sbjct: 131 PRQALALGSDRLDGLLARNLPAGSGSGAILAGFMRSLLTQAPHCRPEELRGLGAVTLDLA 190 Query: 182 PVLHQRESVQPRRERQ-------FQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMF 234 R+ P Q++ +++N+ + L P+ IA MS+R L+ +F Sbjct: 191 TAFLARQLGDPGAAPARARARETLQRIHRFVENNLGDPDLTPQVIADRHNMSLRHLHALF 250 Query: 235 ADKGLVVAQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTP 293 D+ L VA IR RL+ + A + I WGF+ + FS F+Q +G+TP Sbjct: 251 GDQPLTVAALIRRSRLERARSDLARAELGGHPVQAIAARWGFASATGFSRAFRQAYGLTP 310 Query: 294 GEYR 297 E+R Sbjct: 311 TEHR 314 >UniRef50_A3XDY1 Transcriptional regulator, AraC family protein n=1 Tax=Roseobacter sp. MED193 RepID=A3XDY1_9RHOB Length = 324 Score = 198 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 60/297 (20%), Positives = 116/297 (39%), Gaps = 9/297 (3%) Query: 6 DNEFQQWLSQINQVCGNFT-GRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVK 64 + ++W + ++ ++ + +S ++ RT + + Sbjct: 20 ASRLEEWRASMSDAYYALDIVEDDRHALDAKIEIVTLSNVCISKFRSTTAKGFRTRKSIA 79 Query: 65 GSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRT 124 F VF G+ Q R + AG +L + P L S I+L LP + Sbjct: 80 HDTTEHFVFVFVTEGEMFFNQLARWGTLSAGQYVMLRSGEPYELSCLSPSNAITLHLPVS 139 Query: 125 LLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNP-----ALSETESEAALQAMVCL 179 +E + CA+ +++D + ++ ++Q + P A+S + ++ L Sbjct: 140 DVEDRYKLAHLHCAKAIESDAVLFPMAASVMQSVGSVPVSARKAMSHDLRRQVIDTILLL 199 Query: 180 LRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGL 239 LR + ++ + +++ I+ N L A + GMSV ++R F L Sbjct: 200 LRA--ERIQANVDGNDGHLGRLIDYIEQNYANTDLSARTAAQDMGMSVSHVHRAFGSFNL 257 Query: 240 VVAQYIRNRRLDFCADAIRHAADDEK-LAGIGFHWGFSDQSHFSTVFKQRFGMTPGE 295 +R+ RL + +R + + I F GF D SHFS F+ FG++P E Sbjct: 258 TFGSTLRDTRLAQSYELLRSSEGQNSNIGEIAFKVGFLDHSHFSKSFRTAFGISPTE 314 >UniRef50_C0RK84 Helix-turn-helix-domain containing protein AraC type n=35 Tax=Brucella RepID=C0RK84_BRUMB Length = 332 Score = 197 bits (501), Expect = 5e-49, Method: Composition-based stats. Identities = 62/291 (21%), Positives = 121/291 (41%), Gaps = 12/291 (4%) Query: 13 LSQINQVC-GNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWF 71 + + + + +G + + + + T T + + +RT + + ++ Sbjct: 12 RAAMKSMYEIIMDPNDRSYELSGSAKLYASGLITIGTTTFNTQSYARTPKIIAQGGLDFY 71 Query: 72 YTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFP 131 G + + D V GDI ++D ++ + + +PR LE+ Sbjct: 72 VLQLLTGGHLLGDFDGTDVAAKPGDIVIIDMAKTLVSRAFKGPRTTVF-IPRAELEEVVG 130 Query: 132 HQKPICAERLDADLPMVQLSHRLLQESMN-NPALSETESEAALQAMVCLLRPVLHQRESV 190 + + L P+ +L +QE P LS E+ AA + M+ LR + E Sbjct: 131 G-RNLHGLVLSGTRPITRLLFSYIQELNAVVPDLSMDEAIAAQKVMLTFLRTGITGLEEN 189 Query: 191 ----QPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIR 246 P +++++ ID N+ + +L P I +S LYR F + G VA+ IR Sbjct: 190 LVGFLPVNLPMKKRILSFIDQNLSDPLLGPRTIIQNFHVSRSHLYRAFENDGG-VAKTIR 248 Query: 247 NRRLDFCADAIRHAADDEKL--AGIGFHWGFSDQSHFSTVFKQRFGMTPGE 295 ++RLD + + + + + GF+D + F++ FK RFGM+P + Sbjct: 249 DKRLDRAFRILAE-ERNRTVYSKEVAYRCGFNDPAQFASAFKNRFGMSPRD 298 >UniRef50_A1VJU8 Transcriptional regulator, AraC family n=1 Tax=Polaromonas naphthalenivorans CJ2 RepID=A1VJU8_POLNA Length = 348 Score = 196 bits (500), Expect = 5e-49, Method: Composition-based stats. Identities = 69/304 (22%), Positives = 116/304 (38%), Gaps = 17/304 (5%) Query: 12 WLSQINQVCGNFTGRLL-----------TERYTGVLDTHFAKGLKLSTVTTSGVNLSRTW 60 W ++ G L + ++G +D G L +T S R Sbjct: 21 WEDAVHTGIGRMPAELRHQEVIHLLPVGAQAFSGRIDYGDLAGTGLCRMTASPHRFQRAL 80 Query: 61 QEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLL 120 +E + V Q+ + EQ ER + GD +LD RP +QI + Sbjct: 81 REGASLAASPLILVIQVKNSSYFEQRERSGMLSPGDWCVLDTYRPFGWNSASGCEQIIMT 140 Query: 121 LPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN-PALSETESEAALQAMVCL 179 + R A+R D ++ ++ E M L+ + + A+ Sbjct: 141 IQRPADSGLGDLIARGAAQRCDGKTGAARILQAMVSEVMGQIHHLAPYSAGSLASALTAT 200 Query: 180 LRPVLHQRESVQPR---RERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFAD 236 L ++ R+ Q ++ I+ + E L + IA MS RS++R F+ Sbjct: 201 AWNALQEQLEAPAPILLRDTQCSRLKAWIETRLAEPDLSVDTIAQGCRMSARSVHRAFSS 260 Query: 237 KGL-VVAQYIRNRRLDFCADAIRHAAD-DEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPG 294 V+ Y+ RR+ CA A+++ + + I WGFS SHFS VF+ G++P Sbjct: 261 DPTGSVSSYLWQRRVVQCAAALKNPQEMHRSITDIALSWGFSSSSHFSRVFRSTLGVSPR 320 Query: 295 EYRR 298 YR Sbjct: 321 SYRA 324 >UniRef50_A1TIH4 Transcriptional regulator, AraC family n=2 Tax=Acidovorax RepID=A1TIH4_ACIAC Length = 312 Score = 196 bits (498), Expect = 9e-49, Method: Composition-based stats. Identities = 57/301 (18%), Positives = 116/301 (38%), Gaps = 7/301 (2%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRL-LTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 W+ + + ++ L + GL+++ V+ SG + RT Q Sbjct: 14 PPAQRADYWVGAVCDCFLDMEVEPGQRHAFSATLTSVPCGGLRVNRVSGSGQRVRRTQQA 73 Query: 63 VKGSDDA-WFYTVFQLSGQAIMEQDE-RQVQIGAGDITLLDASRPCSLYWQESSKQISLL 120 ++ D ++Y + + S + QD ++ GD+ L+D+ R L + + +S+ Sbjct: 74 IRRGDGDNFYYLLCKDSAPCHVAQDGAGAARLLPGDLALVDSRRRYLLDFPDVVDTVSIQ 133 Query: 121 LPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLL 180 +P L+ + P R+D ++ + + E + + + LL Sbjct: 134 IPIGWLDTWLPAADRWLGRRVDGATGWGRVLSAYVGQLCAERP--ERLAALQAEHLGGLL 191 Query: 181 RPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLV 240 P R ++ + + E L +A + G+S+R+L+R+ + G Sbjct: 192 SLACGPVPEAPP-RTGLLPRIEQCVRERFCEPGLTAAHVADDVGVSLRTLHRVLSSGGTT 250 Query: 241 VAQYIRNRRLDFCADAI-RHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRK 299 A + R+ + + +A IG GF D SHF+ +Q G TP + R + Sbjct: 251 FAVLLMRERMAVAQRMLHAPSHRHVTVAEIGRRAGFLDPSHFARACRQWCGRTPAQERAR 310 Query: 300 F 300 Sbjct: 311 A 311 >UniRef50_C9Z7X5 Putative regulatory protein n=1 Tax=Streptomyces scabiei 87.22 RepID=C9Z7X5_STRSW Length = 322 Score = 196 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 65/304 (21%), Positives = 113/304 (37%), Gaps = 9/304 (2%) Query: 3 PAVDNEFQQWLSQINQVCGNFTGR-LLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQ 61 P W ++ +V + + + L +S G + R+ Sbjct: 16 PPASVR-DAWSEKMAEVHLPWALSYSRRDHLDATVRYRQLDALIVSEFRGGGYSGHRSPD 74 Query: 62 EVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLL 121 + LSG+ + Q + + +G + L D+ E +++SL+L Sbjct: 75 TDSRLGGPRVGVMINLSGRLVCRQGDDTLVLGPDQLLLWDSETAEGFDAVEPRRELSLML 134 Query: 122 PRTLLEQYFPHQK--PICAERLDADLPMVQLSHRLLQESMNN-----PALSETESEAALQ 174 PR A + A + ++ L+ A ++ Sbjct: 135 PREQAPPALAAAATSGRGAVSVAAGSGLASIAADQLRAITRELDHLGDAGLAIACQSLFD 194 Query: 175 AMVCLLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMF 234 + L + RE +V I+D++ + L +A +SVR+L+ F Sbjct: 195 TLDTALDSARAPAGTRSALREALLVRVRRYIEDHLDDADLCATSVAEAHDVSVRTLHLAF 254 Query: 235 ADKGLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPG 294 AD G V ++IR RRL C + A + + F WGF+D +HFS VFKQ +G+TP Sbjct: 255 ADTGTTVGRWIRARRLRACYRDLTRAGGTATVTDVAFRWGFNDVAHFSRVFKQAYGVTPS 314 Query: 295 EYRR 298 RR Sbjct: 315 SVRR 318 >UniRef50_A5EN17 Transcriptional regulator, AraC family n=2 Tax=Bradyrhizobium RepID=A5EN17_BRASB Length = 391 Score = 195 bits (497), Expect = 1e-48, Method: Composition-based stats. Identities = 59/302 (19%), Positives = 113/302 (37%), Gaps = 10/302 (3%) Query: 5 VDNEFQQWLSQINQVCGNFTGRLLT-ERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEV 63 + W + + + ++ + L + SG RT + + Sbjct: 57 PEANIAAWREATSTFFDVDELAGGEVAPFHADVLSYALGPVLLGSARASGQRFRRTAETI 116 Query: 64 KGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPR 123 S ++G +Q+ AGD+ +LD ++ + I+L++PR Sbjct: 117 ARSGVDHIILQLYVTGGYHGVAGPHPIQVEAGDLCVLDLAQTLETRAT-PFEAITLVVPR 175 Query: 124 TLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMN-NPALSETESEAALQAMVCLLRP 182 + + P + + L D + L R L P +S E +AA+ + L+ Sbjct: 176 PMFDARLPQVEDLHGLVLPHDGALAPLLARHLSALFEFAPRMSVDECQAAIDGTIALIAA 235 Query: 183 VLHQRESVQPR-----RERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADK 237 L + + ++ I+ + L + +A G+S SLYR+FA Sbjct: 236 CLRGELERRAADRSVTADASLLRIRQYIEAQLASPELSADTVASHFGLSRASLYRLFAPL 295 Query: 238 GLVVAQYIRNRRLDFCADAIRHAADD-EKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEY 296 G +A YIR+RRL + +++ + W +HF+ +FK +G+TP Sbjct: 296 GG-IADYIRSRRLHRAFFDLAATGSRTVRISEVARRWQLGTDAHFTRLFKTAYGITPRAA 354 Query: 297 RR 298 R Sbjct: 355 RE 356 >UniRef50_B1M073 Transcriptional regulator, AraC family n=3 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1M073_METRJ Length = 328 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 72/304 (23%), Positives = 130/304 (42%), Gaps = 10/304 (3%) Query: 5 VDNEFQQWLSQINQVCGNFTGRLLTER-YTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEV 63 N F+QW + + + + E + G + + +S + + T Sbjct: 12 PRNAFRQWREMVCEQLVPVELKTVDEAQFKGSIAATNIGAVPISHFAHTAMRSETTADAA 71 Query: 64 KGSDD-AWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLP 122 + D Y V LSG+AI Q +++ + GD+ +LDA RP + E+S + L LP Sbjct: 72 RRDDRSDRAYAVLMLSGRAIARQGDQEAECQMGDLFVLDA-RPAVVQ-TETSSTLILDLP 129 Query: 123 RTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMN-----NPALSETESEAALQAMV 177 R LE + A R+ AD L+ +Q+ + P + + + +V Sbjct: 130 RDRLETALGPSRLFSALRVGADHASTTLARTYIQDLVAVADRLGPDAAARLASIGIDLIV 189 Query: 178 CLLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADK 237 L + Q Q+ ++ ++ + L P +A G+S+R L +F ++ Sbjct: 190 ASLAERMAQEVPRSIHGNVTVQRAKAYVETHLGDPSLDPPQLAAAMGLSLRRLQELFHER 249 Query: 238 GLVVAQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEY 296 G ++ YI RRL+ A + A + + + GFS Q+HF+ FK R+ ++P EY Sbjct: 250 GRHISDYIWERRLEVAAKRLTDPACAHLSVGMLAYACGFSSQAHFARRFKDRYDVSPREY 309 Query: 297 RRKF 300 R+ Sbjct: 310 RQAH 313 >UniRef50_C8SUL6 Transcriptional regulator, AraC family n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SUL6_9RHIZ Length = 339 Score = 194 bits (494), Expect = 3e-48, Method: Composition-based stats. Identities = 62/306 (20%), Positives = 123/306 (40%), Gaps = 18/306 (5%) Query: 6 DNEFQQWLS-QINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVK 64 + F W + ++ G + ++ L L ++ + + +R + Sbjct: 38 RDRFSLWQDIHVAEIWSVEYGTSENLPFQASIEATTVGELVLGQMSGTIKHATRKASNIA 97 Query: 65 GSDDAWFYTVF-----QLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISL 119 D+ + + LSG Q R+ +G G+ L+ A+ + + + ++ Sbjct: 98 DDDNDGYLLLINKADTLLSGT----QAGREYGVGRGEAVLVTAAEALKMGGADWNVWTNV 153 Query: 120 LLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMN-NPALSETESEAALQAMVC 178 ++PR +L Q FP A ++ A+ + L R Q P S A + +V Sbjct: 154 VVPRAILTQAFPQIDDRLALKIGAENEALDLLKRYCQLLEAGRPLASPDLIAHATETIVD 213 Query: 179 LLRPVLHQR------ESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYR 232 L+ V + ++ R + Q ++ I DN + + + +A E G+S R ++ Sbjct: 214 LIGLVTGAKGQRAELAGLRGLRAARLQAIMAKIADNFADPGISAQGVAQELGLSARYVHD 273 Query: 233 MFADKGLVVAQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGM 291 + + G + + RL + DD +++ I GFSD S+F+ F++RFG Sbjct: 274 LLQETGTSFTERVLELRLQRAHKMLSQRHNDDMRVSDIAMISGFSDVSYFNRCFRRRFGH 333 Query: 292 TPGEYR 297 TP R Sbjct: 334 TPTSAR 339 >UniRef50_Q1QJK3 Transcriptional regulator, AraC family n=1 Tax=Nitrobacter hamburgensis X14 RepID=Q1QJK3_NITHX Length = 332 Score = 194 bits (493), Expect = 4e-48, Method: Composition-based stats. Identities = 50/308 (16%), Positives = 108/308 (35%), Gaps = 11/308 (3%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLL-TERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 + W Q + + G ++VT S V +SRT + Sbjct: 22 PARDRLPVWREVFGQTMVRLDIEPAKGTSFHAEGELCALPGAAFASVTVSPVRVSRTQRL 81 Query: 63 VKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLP 122 + + V + Q R+ + AGD L S + ++ ++ ++ + Sbjct: 82 IADDMADMVFLV-TADAPLRIAQRGREQVLDAGDAIFLRGSECSVIQCRDRARFTNISVS 140 Query: 123 RTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN-----PALSETESEAALQAMV 177 L +++ + + M+ + L + M Sbjct: 141 IDDLTPMLANREDVSLTVVSRQNEMLDFLVGYVSLLQARQKPCSDELGRIATAHIRDLMA 200 Query: 178 CLLRPVLHQRESVQPR---RERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMF 234 ++ + R R + + + + I ++ E L + IA G+S R + ++F Sbjct: 201 AMIGAEPDCGSPARERGGVRAARLRAIKSDIGTHLCEPGLSIDMIAARHGISPRYVRKLF 260 Query: 235 ADKGLVVAQYIRNRRLDFCADAIRHAADDE-KLAGIGFHWGFSDQSHFSTVFKQRFGMTP 293 D+ + ++ + RL++ + +A I GFSD S+F+ F++R+ +TP Sbjct: 261 QDEHTTFSDFVLSLRLEWSRRLLLSPGHATCTIASIAHASGFSDLSYFNRTFRRRYAVTP 320 Query: 294 GEYRRKFR 301 + R R Sbjct: 321 SDIRNGIR 328 >UniRef50_A1K9Y0 Putative AraC-like transcriptional regulator n=1 Tax=Azoarcus sp. BH72 RepID=A1K9Y0_AZOSB Length = 311 Score = 193 bits (492), Expect = 5e-48, Method: Composition-based stats. Identities = 66/296 (22%), Positives = 117/296 (39%), Gaps = 5/296 (1%) Query: 8 EFQQWLSQINQVCGNFTGR-LLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGS 66 W + T R+ G + + + ++R + + Sbjct: 15 RHDNWRETVASQFLPLDFEVARTTRFHGRGLWAQVDQARAAEIRMCEHRVTRQRSHLAAA 74 Query: 67 DDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLL 126 D ++ LSG ++Q+ + + A DA P SL E ++ ISLL Sbjct: 75 DGPAVKLLWLLSGSGRLQQNGGECSLQAERWLFYDAIHPYSLQLSEDARFISLLYTGNSA 134 Query: 127 EQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPVLHQ 186 E++ + + + P L L A L++++ L L Sbjct: 135 ERWMRLARDLGSAPRQTAGPARIALLALRGAMRERDGLDGLAQRALLESVLALTESALRT 194 Query: 187 RESVQPRRER---QFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQ 243 Q R+R + + + ++ L P+ IA +S RSLY +FA+ GL + Sbjct: 195 ALPEQGGRQRDALRLVEARRFVLQHLANAELGPDDIARALHVSRRSLYNLFAEAGLRPRE 254 Query: 244 YIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRK 299 ++RN RL+ +A+ A D + I GF+D +HFS F++RFG++P YR + Sbjct: 255 FVRNLRLEKACEALARPAGD-SITTIALDHGFTDAAHFSRSFRERFGVSPSAYRGR 309 >UniRef50_C9Z339 Putative AraC family regulatory protein n=2 Tax=Streptomyces RepID=C9Z339_STRSW Length = 324 Score = 193 bits (491), Expect = 6e-48, Method: Composition-based stats. Identities = 55/314 (17%), Positives = 110/314 (35%), Gaps = 15/314 (4%) Query: 2 NPAVDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQ 61 + ++ F+ W + + + + L + + + R + Sbjct: 6 DVPAEDRFEHWRELLGATRTSEAISTHSADFWAQLRLMELGPVIVWPASFLPTRYRRNQR 65 Query: 62 EVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQ----- 116 V+ SD ++ L G ++ +R G D+ L+D+SRP + + + Sbjct: 66 MVRQSDPELYHLTLLLDGDLALDHADRCDTFGPRDLHLVDSSRPYDIRSADGGRTGVVRG 125 Query: 117 ISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPA-LSETESEAALQA 175 + + P+ L + + L + L L L ++ Sbjct: 126 VGVDFPKALFPLPPHQVRQLLGRGLSGREGLGALLTDFLVGLERQADRLQPADAPRLGTV 185 Query: 176 MVCLLRPVL------HQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRS 229 ++ LL S + R Q++ I N+ + L P +A +S+ Sbjct: 186 VLDLLSAWFAHALEAEAALSPETRVRALTQRIQAFIRQNLHDPELTPPVVAAAHHISLSY 245 Query: 230 LYRMFADK--GLVVAQYIRNRRLDFCADAIRHAADDEK-LAGIGFHWGFSDQSHFSTVFK 286 L+R+F + G VA +IR RRL+ + + + I WG S F+ F+ Sbjct: 246 LHRVFQQQTGGETVAAWIRARRLEGARRDLADPSLSVTPIHVIAARWGMPRASDFTRAFR 305 Query: 287 QRFGMTPGEYRRKF 300 G+ P E+R + Sbjct: 306 AAHGLAPREFRLRA 319 >UniRef50_Q0K404 Formamidase fused to an AraC-type HTH DNA-binding domain n=6 Tax=Proteobacteria RepID=Q0K404_RALEH Length = 796 Score = 193 bits (491), Expect = 7e-48, Method: Composition-based stats. Identities = 58/302 (19%), Positives = 111/302 (36%), Gaps = 14/302 (4%) Query: 7 NEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAK-GLKLSTVTTSGVNLSRTWQEVKG 65 W ++ + G +++ G++L+ + + L+ + Sbjct: 24 RRGAAWRDELRAARLHCESLCADHTLHGTIESRTTPAGIELTCIASVPQTLA-----ITS 78 Query: 66 SDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTL 125 D + G+A + E + + G + + L S + + + + + L Sbjct: 79 GDGRGLMLLMLTEGEAHLAAPELREPLRPGQVVCVPEHAARRLALATSFRMLIVHIGQAL 138 Query: 126 LEQYFPHQKPICAERLDADLP--MVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPV 183 L P A L D +L + + + + + L Sbjct: 139 LSARITAPLPRSALVLSGDAAELFARLLQSMAASFDTIVSANAKAIQPFDNTITACLDAA 198 Query: 184 LHQRESVQPR-----RERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKG 238 L + P R F +V + ID + E L IA + MS R L ++F G Sbjct: 199 LADSQPSAPPDMTPSRAAVFARVCSRIDARLAEPELSLAAIAADERMSARYLQKLFEKSG 258 Query: 239 LVVAQYIRNRRLDFCADAIRHAADD-EKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 + Y+R RL+ C + + D ++ I + WGF+D SHFS F+++FG++P YR Sbjct: 259 SSFSAYLRTSRLERCRADLANHQYDKLSVSDICYRWGFNDPSHFSHAFREQFGISPRAYR 318 Query: 298 RK 299 + Sbjct: 319 EQ 320 >UniRef50_D1XQJ8 Transcriptional regulator, AraC family n=2 Tax=Streptomyces RepID=D1XQJ8_9ACTO Length = 342 Score = 193 bits (491), Expect = 7e-48, Method: Composition-based stats. Identities = 60/314 (19%), Positives = 116/314 (36%), Gaps = 15/314 (4%) Query: 2 NPAVDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQ 61 A + F W + + + + + + + + + + Sbjct: 10 EVAAADRFDYWRELVGRTRASEMSSPYARDFHASMRLMQLGPVTVWPTSVLPARYRLSPR 69 Query: 62 EVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSL-----YWQESSKQ 116 +DD ++ L G+ +E G D+ ++D S P L + Sbjct: 70 RAHRTDDGLYHLTLLLEGELTLEHSGGTDTFGPCDLHVVDDSLPYDLRPSDGRASGPVRG 129 Query: 117 ISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLL-----QESMNNPALSETESEA 171 + + P+ +L + + L + L L Q ++ PA + Sbjct: 130 VGVDFPKAMLPLAPHRLRQVLGRGLPGGEGLGALLVGFLTGLEQQAAVLRPADAPRLGAV 189 Query: 172 ALQAMVCLLRPVLHQRESVQP--RRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRS 229 L + LL L ++ P RR+ +++ I +N+ + L P +A +SV Sbjct: 190 VLDLVSALLAQALDAESALTPESRRQVLLRQIDAFIRENLHDPELSPRAVAAAQHISVSH 249 Query: 230 LYRMFAD--KGLVVAQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFK 286 L+R+F + +G VA IR RL+ + A D+ + GI WGF FS F+ Sbjct: 250 LHRVFEEQAQGETVAARIRRLRLENARRDLEDPALRDDPVYGIAARWGFPRACGFSRAFR 309 Query: 287 QRFGMTPGEYRRKF 300 +G++P E+R + Sbjct: 310 AAYGLSPREHRLRA 323 >UniRef50_A3VDL3 Helix-turn-helix, AraC type n=1 Tax=Rhodobacterales bacterium HTCC2654 RepID=A3VDL3_9RHOB Length = 322 Score = 193 bits (490), Expect = 8e-48, Method: Composition-based stats. Identities = 63/296 (21%), Positives = 119/296 (40%), Gaps = 10/296 (3%) Query: 13 LSQINQVCGNFTGRLLTER-YTGVLD-THFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAW 70 + F R R Y G + ++ + ++L+ ++ + + +R Sbjct: 18 RQMNGLLRTRFDLRSDGARSYDGEIRKSYVSPHVRLADISFTPHS-TRLKAGKSSRLGRS 76 Query: 71 FYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYF 130 F Q+ G A + Q R+ I I +D ++P + + + S+ L ++ F Sbjct: 77 FLVSHQIEGHACVRQGGREAVIRPNQIFFIDTTQPFEIE-TDDIRTRSIYLDSHFWQEIF 135 Query: 131 PHQKPICAERLDADLPMVQLSHRLLQESMN-----NPALSETESEAALQAMVCLLRPVLH 185 P ++ A LD D M ++ E + + + + Sbjct: 136 PERELYTATALDCDRGMGYTCKTMIDEMFGMEWDIQDRAMQRLAGCLANLLAVSMVTSNP 195 Query: 186 QRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYI 245 + E+ Q++ I N+ + L IA E G+SVR ++ +F+ G + ++I Sbjct: 196 LERTGLGSNEQTLQRIHEAILRNLADPDLDCARIAEEVGLSVRQVHAVFSGTGSTLMRHI 255 Query: 246 RNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKF 300 RRL A + +A + ++ I F WGF++ +HFS FK FGM P +YR Sbjct: 256 WKRRLSRIASDLANANLSHKPVSTIAFEWGFNEAAHFSRQFKAEFGMPPAKYREHH 311 >UniRef50_Q0B5M9 Transcriptional regulator, AraC family n=4 Tax=Burkholderia ambifaria RepID=Q0B5M9_BURCM Length = 316 Score = 193 bits (490), Expect = 8e-48, Method: Composition-based stats. Identities = 57/295 (19%), Positives = 106/295 (35%), Gaps = 6/295 (2%) Query: 13 LSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFY 72 I ++ + GL+++ V T+ + + R +D + Sbjct: 17 RDLIADSFLPLVFHDTGPQFRMSVRVATVGGLRMAEVDTTAIRVDRDRSLASRADSDCYK 76 Query: 73 TVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRT---LLEQY 129 +FQ++GQ+ + Q + G+ + DA++P + +S+ ++ L P + + Sbjct: 77 ILFQIAGQSRVTQRNATSTVNPGEWVIYDATQPYMIESTNASRFVAALTPPRSGTMWRWF 136 Query: 130 FPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLL--RPVLHQR 187 + +Q H L+ + N S E + ++ + R Sbjct: 137 VERAGVQVRRTVGNAQLALQSIHYLMDGQVPNDPESLFGFEQSTLMLLDSVIRREASDSL 196 Query: 188 ESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRN 247 R + + + L P+ +A +S R+LY A I+ Sbjct: 197 TGTDARSAALRMNAEIYLSHHYSDPDLSPDKLASALNVSRRTLYSALAASERTPQSLIQE 256 Query: 248 RRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKFR 301 RL A+ A + L + GFSD +HF FK RFG +PG YR R Sbjct: 257 YRLQASRRALEDPADTNRTLLELAIACGFSDITHFGRAFKARFGCSPGVYRDACR 311 >UniRef50_B9JNE0 Transcriptional regulator protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JNE0_AGRRK Length = 376 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 56/303 (18%), Positives = 106/303 (34%), Gaps = 12/303 (3%) Query: 4 AVDNEFQQWLSQINQVCG--NFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQ 61 A ++F W + + + + + G+ + + R+ Sbjct: 44 APIDQFAAWQAYVAPLMDIQRPDVSSQDTEFVADHASWNLGGMLVVQQNAPPHSYMRSQA 103 Query: 62 EVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLL 121 +V+ ++ +G E D + G++ L P + S+ +SL L Sbjct: 104 KVRSDLIDHWHVSILRNGHMWTEVDGHVSEGEPGNVELRSLGHPFRGRSTQ-SRSLSLYL 162 Query: 122 PRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPA-LSETESEAALQAMVCLL 180 PR L + L +L L N + + + +Q ++ Sbjct: 163 PRELFFDIPGSTEIKNNTALSGTY--TKLLIEYLDSLEENLSRFAAKDLPHVVQTTRDMI 220 Query: 181 RPVLHQRESVQPRRE-----RQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFA 235 + E +++ L+ N+ L EW+ E G+S LY++ Sbjct: 221 LTCVSSSAVDATVSEQHSNWALMERMRRLVQRNLMSPDLTTEWLCRELGVSRTRLYQLLE 280 Query: 236 DKGLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGE 295 G + YI+ RRL A+ + +++ I F GFS +HFS F + FG +P E Sbjct: 281 PDGG-IHHYIQRRRLLSAHAALSDITNRQQIGDIAFAVGFSSAAHFSRAFSKEFGYSPRE 339 Query: 296 YRR 298 R Sbjct: 340 ARN 342 >UniRef50_A9C153 Transcriptional regulator, AraC family n=1 Tax=Delftia acidovorans SPH-1 RepID=A9C153_DELAS Length = 382 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 60/305 (19%), Positives = 113/305 (37%), Gaps = 15/305 (4%) Query: 6 DNEFQQWLSQINQVCGNFTGRLL---TERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 + F+ W + I+ + + + + L L + SR Sbjct: 49 ADRFEAWRASISVLFDVAPVEHRTASGDSFHASVHATHLGQLLLGDLRFGAQRFSRNKAR 108 Query: 63 VKGSDDAWFYTVFQLSGQAIMEQDER-QVQIGAGDITLLDASRPCSLYWQESSKQISLLL 121 + + SG + + D ++Q+ AGD+ + D +R E S +SL++ Sbjct: 109 AARDGLDHYLVQWYRSGSFVGQHDGSSELQVNAGDVVVFDMART-QQTLAEHSHVLSLIV 167 Query: 122 PRTLLEQYFP-HQKPICAERLDADLPMVQLSHRLLQESMNN-PALSETESEAALQAMVCL 179 PR L + F H + L + L L P ++ +++ + A + Sbjct: 168 PRRLGDAAFGTHGADLHGTVLASGSIFAGLLADHLDALHRRLPTIALLQADDVVHATTQM 227 Query: 180 LRPVLHQRESVQPRR-----ERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMF 234 L L + +++ I N+ L PE + G+S LY +F Sbjct: 228 LAACLRPSQRTLAEARNEVQAATLERIQRHIAQNLAAP-LTPEILCRRFGISRHRLYHLF 286 Query: 235 ADKGLVVAQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTP 293 G V +Y++ RRL + + ++A + GF+ ++HFS F+ FG TP Sbjct: 287 EPLGG-VMRYVQQRRLQRAFHTLSNPTCRRLRIADVATRLGFASEAHFSRAFRAAFGHTP 345 Query: 294 GEYRR 298 + R Sbjct: 346 SDVRA 350 >UniRef50_B9BG93 Transcriptional activator FeaR n=1 Tax=Burkholderia multivorans CGD1 RepID=B9BG93_9BURK Length = 330 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 67/311 (21%), Positives = 122/311 (39%), Gaps = 17/311 (5%) Query: 4 AVDNEFQQWLSQINQVCGNFTGR----------LLTERYTGVLDTHFAKGLKLSTVTTSG 53 + + W I+ + + T ++G + + + V + Sbjct: 12 SSSER-RAWPDLISDLVAGSPPERNRQSCEFEPIGTTPFSGSITCGAVGAARFARVAATP 70 Query: 54 VNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQES 113 + GSD A + Q G +++ RQ+++ G+ T+ DA P ++ Q Sbjct: 71 SVYRGQPRL--GSDIAPLFVALQTHGDSLLGDGVRQIRLLPGEWTVFDARCPFTISSQHC 128 Query: 114 SKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPA-LSETESEAA 172 + I + +P + Q ++ L+ + + ++ Sbjct: 129 MELIFVNVPGLIPAQPPRQPLIYPTFEPSGTSGSARMFSDLVVSLFRELENVDSNIAISS 188 Query: 173 LQAMVCLLRPVLHQRES-VQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLY 231 + + L + E Q + V+ I++++ + L P IA GMS+R ++ Sbjct: 189 VDLLRNLFSDAFRIQCPWPAQPLETQRRAVLQFIEEHLSDPELSPPSIASALGMSIRQVH 248 Query: 232 RMFADKG-LVVAQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRF 289 R+F G V +YI RR+ C++ +R A + I F WGFS HFS FK+ Sbjct: 249 RLFKRAGSQTVGEYIWKRRIQRCSEELRSGANAALSVTTIAFRWGFSSSPHFSRAFKKEM 308 Query: 290 GMTPGEYRRKF 300 GMTP EYRR F Sbjct: 309 GMTPSEYRRNF 319 >UniRef50_B4UXL2 AraC-family transcriptional regulator n=1 Tax=Streptomyces sp. Mg1 RepID=B4UXL2_9ACTO Length = 334 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 65/310 (20%), Positives = 113/310 (36%), Gaps = 12/310 (3%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRL-LTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 A + F+ W + +++ R + G+ + + + RT + Sbjct: 15 APADRFESWRALMSETHAPMEMRSEHAADFWVNQRVISLGGITVYPLECRPLTFQRTPKL 74 Query: 63 VKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESS-KQISLLL 121 + SD F+ G + + V G DI D SRP + S + I + + Sbjct: 75 IARSDPEAFHLSLIKRGAGAVTLGKDTVVHGVSDIHTSDTSRPFEISSGPHSVEIIGVEV 134 Query: 122 PRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMN-----NPALSETESEAALQAM 176 P+ LL +R+ A M L L + A S + Sbjct: 135 PKALLPLPPHIAGRAIGKRISAREGMGALVATFLDQVTKDSRSYRAAEGPRLSGVLADLV 194 Query: 177 VCLLRPVLHQRESVQP--RRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMF 234 L VL S+ P R +V+ I DN + +L IA +SV L+R+F Sbjct: 195 ASLFAGVLEADRSLTPETHRRALALRVMAFIRDNADDPLLDVPAIAAAHHISVSYLHRVF 254 Query: 235 ADK--GLVVAQYIRNRRLDFCADAIRHA-ADDEKLAGIGFHWGFSDQSHFSTVFKQRFGM 291 + G+ V+ +++ +RL + + + IG GF S FS F+ +G+ Sbjct: 255 QQEGDGVTVSAFLQGQRLARARQDLADPLHQEVPVHVIGARRGFRHASAFSRAFRDAYGL 314 Query: 292 TPGEYRRKFR 301 P +R + R Sbjct: 315 PPAAFRGQAR 324 >UniRef50_C5SNU8 Transcriptional regulator, AraC family n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SNU8_9CAUL Length = 317 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 50/308 (16%), Positives = 110/308 (35%), Gaps = 15/308 (4%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAK-GLKLSTVTTSGVNLS-RTWQ 61 W+ + ++ R G + G + + + ++ S R Sbjct: 12 PEAERQAAWVDVLRRLKLPVADLSSLSRVRGSVMVTTTPLGCEFAVLDSTPQTYSGRNPD 71 Query: 62 EVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLL 121 + + G+ I+E + I + +L + + + + Sbjct: 72 H-----SSAVWLAVLARGEGILEYSGETTVLSPRSIIFGASGVDSTLRLTSDFRMLFIKI 126 Query: 122 PRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN-PALSETESEAALQAMVCLL 180 P+ + L + ++ + LL + AL + Q+M+ L Sbjct: 127 PQLAVSPRMITPLGQRVGILPGGSGLEKMFNGLLLSLADTLEALDGDHFQPVEQSMIEFL 186 Query: 181 RPVLHQRE------SVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMF 234 L R +++ I+ + + L +A E G+S R + ++F Sbjct: 187 VACLASDGRIESKGGAAGARAFHLRRICQKIETLLHDPELSLLKVAAENGVSPRYVQKLF 246 Query: 235 ADKGLVVAQYIRNRRLDFCADAIRHA-ADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTP 293 + + Y++ RRL+ C + ++ I F WGF+D +HFS F++RFG++P Sbjct: 247 TGAQMTFSNYLKTRRLERCYADLISPVHAQLSVSEICFRWGFNDAAHFSRTFRERFGLSP 306 Query: 294 GEYRRKFR 301 ++R+ + Sbjct: 307 SKHRQSSQ 314 >UniRef50_A0JW90 Transcriptional regulator, AraC family n=1 Tax=Arthrobacter sp. FB24 RepID=A0JW90_ARTS2 Length = 325 Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 62/300 (20%), Positives = 106/300 (35%), Gaps = 5/300 (1%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLLTE-RYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 A N Q W + + R L E L+L+ V + + R+ Sbjct: 23 APVNRVQLWEGHNAKALISLDIRTLDESPLHAAEVNLQFPYLRLAHVRGTAQIVERSESF 82 Query: 63 VKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLP 122 ++ + F L+G A + G + DA P + E +++ L +P Sbjct: 83 IRQNPTEMVAIFFALAGDAFFYHRSGHELLKPGQAIMYDADLPFMRGFAEGLQELVLTVP 142 Query: 123 RTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRP 182 R L + R D V + L + ++ ++ A ++ L R Sbjct: 143 RPLFLELSGGTGLNRPVRFDFGPGGVPQAQELARRI-RTALAAQQPTDDAENTVLELFRS 201 Query: 183 VLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVA 242 + I+ + + L +A G+S R L R FA GL Sbjct: 202 IASG--GNAGSDAGYLAAAKGYIERHHGDPELSTAEVAAAVGISERQLGRAFAAAGLTPG 259 Query: 243 QYIRNRRLDFCADAIRHAADD-EKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKFR 301 +Y+ RLD + + A D + I GF Q++F+ FK+RF TP + R+ R Sbjct: 260 RYVLGLRLDRGQELLASPAADGLSIGEIAARVGFLSQNYFARTFKERFSATPLQTRKAAR 319 >UniRef50_Q92PG5 Transcription regulator AraC family n=1 Tax=Sinorhizobium meliloti RepID=Q92PG5_RHIME Length = 338 Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 63/297 (21%), Positives = 112/297 (37%), Gaps = 11/297 (3%) Query: 9 FQQWLSQINQVCGNFTGRLLTER-YTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSD 67 F W IN V R +T ++ + ++ R+ V+ Sbjct: 16 FDVWRESINVVFDVERRSQDGNRPFTASVEAFQLGDMVVTDAVLGAQRYVRSSARVRRDG 75 Query: 68 DAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLE 127 F +G I E + + AG +++LD S + + +++ LPR+L+E Sbjct: 76 MDHFVLNLYRTGGWIAETARGEFEGRAGQVSVLDLSCEL-ISDEPDCHLVAMFLPRSLIE 134 Query: 128 QYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSE-----TESEAALQAMVCLLRP 182 P+ + M L L + AA Q + L P Sbjct: 135 DRLPNLGGLHGSAPTGPYAM--LLAEYLDMLARRLPFLHSGDETALAGAACQMLAACLAP 192 Query: 183 VLHQRESVQPRRER-QFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVV 241 L E+ +P E ++ I+ ++ L + I G+S R+L+R+F +G V Sbjct: 193 SLANVEAARPGLELVLLRRAKRYIEGHLNSSALNIDAICNIVGVSRRTLFRLFEQEGG-V 251 Query: 242 AQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRR 298 YI+ RRL+ + + +++ I +GF HF+ FK ++G T E R Sbjct: 252 LHYIQGRRLERIRAVLSDPNETRRISDIAAEFGFLRGDHFARAFKHQYGETAREIRE 308 >UniRef50_B1M2F8 Transcriptional regulator, AraC family n=2 Tax=Methylobacterium RepID=B1M2F8_METRJ Length = 351 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 67/305 (21%), Positives = 121/305 (39%), Gaps = 11/305 (3%) Query: 4 AVDNEFQ---QWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTW 60 ++ W + + + ++ L + V L RT Sbjct: 31 PPEDREALGRAWQDHLAPIFDVSFRPETDLTVPIAMRSYHLGDLLVGDVVAPAHTLVRTR 90 Query: 61 QEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLL 120 + + F GQ+ +E D+ + + D ++P + + +++ Sbjct: 91 EMIGQQGLDHILLQFYRRGQSRVETDQGTGPVNEVQCIVFDLAQPVRI-VAGAVDATNVV 149 Query: 121 LPRTLLEQYFPHQKPICAERLDAD-LPMVQLSHRLLQESMN-NPALSETESEAALQAMVC 178 +PR LLE+ H + LD D P +L H + + L E+ AA A+ Sbjct: 150 IPRALLEKQGCHPDALHGRSLDHDGDPFGRLVHNFVANVVACGDLLDRREALAASAAITQ 209 Query: 179 LLRPVLHQRESVQPRRERQFQ-KVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADK 237 L L +E +P + + + +V L++ + L P IA G+S +LYR+FA Sbjct: 210 LCASWLRGQEEGRPAQHQDVRIRVRRLVEAELGNPKLTPALIATRLGLSRSTLYRLFAPN 269 Query: 238 GLVVAQYIRNRRLDFCADAI--RHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGE 295 G+ YIR+RRL + A +++ + F GFSD+ F FK+RFG P + Sbjct: 270 GI--VAYIRDRRLMAAMRMLVRDDAPKPLRVSQVAFAVGFSDERTFRRAFKRRFGFIPSD 327 Query: 296 YRRKF 300 ++ Sbjct: 328 ASQRL 332 >UniRef50_C8STG1 Transcriptional regulator, AraC family n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8STG1_9RHIZ Length = 315 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 67/300 (22%), Positives = 117/300 (39%), Gaps = 8/300 (2%) Query: 10 QQWLSQINQVCGNFTGRLLTERYTG--VLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSD 67 + +LS + G T R L + +LS + + + + D Sbjct: 12 EAFLSTSRLLFGPITQRFPRGTVPSIPQLVSVNLGACRLSEIKANSHLVVNDRLFWRSFD 71 Query: 68 DAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLE 127 + QL G++ EQ + V +G + D R SL Q+ L +PR+ Sbjct: 72 PDAIKILVQLRGRSRFEQQQVAVDLGPQSAVIYDPVRSYSLQNLSDVDQLILQVPRSTFG 131 Query: 128 ----QYFPHQKPICAERLDADLPMVQLSHRLLQESMNNP-ALSETESEAALQAMVCLLRP 182 P+ + L + E+ A S ++ +Q + L++ Sbjct: 132 DDTLARLSAPLPLPGNGDSLTHIVSGLMQMAIGEAHKLDEAGSRRVGDSLVQLVNGLIQA 191 Query: 183 VLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVA 242 E +P E +++V ID N+ L E IA G S R L+R F +G + Sbjct: 192 KPMAPEFRRPPLEALRERIVAYIDANLARSSLSAEDIARHMGCSRRYLHRAFEGEGATLE 251 Query: 243 QYIRNRRLDFCA-DAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKFR 301 +++ +RRL+ + + A ++ I F GF+ +HFS FK R+ + P E R + R Sbjct: 252 RFVWDRRLERSKEELLSPARASASISEIAFACGFNSSAHFSRAFKGRYDVAPRELRERLR 311 >UniRef50_Q4KD45 Transcriptional regulator, AraC family n=4 Tax=Pseudomonas RepID=Q4KD45_PSEF5 Length = 323 Score = 191 bits (485), Expect = 3e-47, Method: Composition-based stats. Identities = 57/297 (19%), Positives = 107/297 (36%), Gaps = 9/297 (3%) Query: 11 QWLSQINQVCGNFTGRLLTER-YTGVLDTHFAKG--LKLSTVTTSGVNLSRTWQEVKGSD 67 +W I + ++R + G L L LS + +S + SR+ +V Sbjct: 18 RWAEAIGNAYFPLSLEFSSDRPFQGNLRIWETPSSALALSRLRSSRLGYSRSKAQVSNDT 77 Query: 68 DAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLE 127 A + + + EQD R++ G P + + LP L Sbjct: 78 QACYLVTIPRRHEVLFEQDGRELHCRPGSFIFERGDAPYRFRYASDNDLWVFKLPEQALH 137 Query: 128 QYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPVLHQR 187 + DA + ++ L + L + ++ Sbjct: 138 GQLRGAERYTRFCFDARRGLGRIFADQLAMCAARFDECAPAARHMLLEQALATLLLTLRQ 197 Query: 188 ESV------QPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVV 241 + Q++ + ++ ++ L P IA G+S+R L+++FAD + Sbjct: 198 DERVLSSESSSLAALHLQRIESYVEQHLGSAELNPRQIASACGISLRYLHKLFADSPFSL 257 Query: 242 AQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRR 298 ++IR +RL +R A + + WGF+DQ+ F+ F+Q+FG T E R Sbjct: 258 GEWIRQQRLCAVHRQLRDAHCRLSIGELAARWGFADQAQFARHFRQQFGCTASEVRA 314 >UniRef50_A5EU33 Transcriptional regulator, AraC family n=1 Tax=Bradyrhizobium sp. BTAi1 RepID=A5EU33_BRASB Length = 338 Score = 190 bits (484), Expect = 4e-47, Method: Composition-based stats. Identities = 55/303 (18%), Positives = 105/303 (34%), Gaps = 10/303 (3%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLLTER-YTGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 W QV + + GL+L + +SR+ Sbjct: 17 PEHERAALWREHYGQVMLRVDFEPAPQVVFKARNRAMTLPGLQLFDAWATPARVSRSGCY 76 Query: 63 VKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLP 122 + +G A + ++ G LL + PC+ + + +LL+P Sbjct: 77 LA-HGADNVILAINRNGVAFVASGNESCELREGQAVLLSGADPCAFHRASPGRSFTLLVP 135 Query: 123 RTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETES-----EAALQAMV 177 R +E + + AD +QL M++ ET+ + Sbjct: 136 RMAIEAADVSVEDAIMRPIPADRGALQLLDHYASLLMSSGDAIETQLLNLSIRHVQDLLA 195 Query: 178 CLLRPVLHQRESVQPR--RERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFA 235 + P ++++ R R + + I N L +A + ++ R + R+F Sbjct: 196 LAIGPTADLGDTMRARGLRAARLKLAKAFILANSARHDLSIVVVADKLNVTPRYVQRLFE 255 Query: 236 DKGLVVAQYIRNRRLDFCADAIRHAADD-EKLAGIGFHWGFSDQSHFSTVFKQRFGMTPG 294 G + ++ RL + A +A I + GF D SHF+ F++++G+TP Sbjct: 256 IDGTTFSAFLSGVRLTNAHRMLCDPACRSLAIASIAYDVGFGDLSHFNRSFRRQYGLTPR 315 Query: 295 EYR 297 E R Sbjct: 316 EVR 318 >UniRef50_UPI0001B4D7D7 AraC family transcriptional regulator n=1 Tax=Streptomyces hygroscopicus ATCC 53653 RepID=UPI0001B4D7D7 Length = 320 Score = 190 bits (484), Expect = 4e-47, Method: Composition-based stats. Identities = 57/303 (18%), Positives = 106/303 (34%), Gaps = 11/303 (3%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEV 63 + W + R L + L + + + R V Sbjct: 10 PEPDRVASWEAHNTASVAPLRCRALESGFHASRVRTTIGALDVLRTIATSHVIERDAGLV 69 Query: 64 KGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPR 123 + L G++ + + + G LL +P + + + +PR Sbjct: 70 RDHPVDQVAVHMILRGESAFCTSDGVLTLRPGQ-VLLRGDQPFLHGYTGDLHDLVVGVPR 128 Query: 124 TLLEQYFPHQKPICAERLDADLPMVQ---LSHRLLQESMNNPALSETESEAALQAMVCLL 180 +L ++ P + +D D P RLL ++ + + L+ + L+ Sbjct: 129 SLYAEFTHGTPPSRPQVIDTDGPSGACVAALGRLLDGAVRSETFPRPDDATVLELLAVLI 188 Query: 181 RPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLV 240 V + +++ ++ + L IA G+S R L R+FA + Sbjct: 189 SG-----RRVPLSASAHYAAAREVVERHLHDPGLSATSIAARIGISERHLSRVFAAQDTT 243 Query: 241 VAQYIRNRRLDFCADAIRHAAD--DEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRR 298 V Q++R RLD + + +A + GF+ SHFST F +RFGM P + R Sbjct: 244 VPQFVRALRLDRAHRMLATSGGRERLTVAEVAHRCGFASASHFSTSFAKRFGMRPTDLAR 303 Query: 299 KFR 301 + R Sbjct: 304 QAR 306 >UniRef50_Q8VUZ3 Cad gene transcriptional regulator n=2 Tax=Alphaproteobacteria RepID=Q8VUZ3_9BRAD Length = 336 Score = 190 bits (483), Expect = 5e-47, Method: Composition-based stats. Identities = 54/300 (18%), Positives = 113/300 (37%), Gaps = 5/300 (1%) Query: 5 VDNEFQQWLSQINQVCGNFTGRLLT-ERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEV 63 + W + T + G + L+L+ ++ + + R+ + Sbjct: 22 AQSALSSWTDHLASQLTELHIEGRTFSTHRGCIRHIELGPLQLNYLSATSQRVLRSRAMI 81 Query: 64 KGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPR 123 S + + + + +A + R++ I G LLD +P L + +++ L Sbjct: 82 DKSSNDYLLLLIEKE-EAQLHHYGRRLTIPEGSFVLLDNQQPFELLREAGGSSLAVRLED 140 Query: 124 TLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAA-LQAMVCLLRP 182 L ++ PH + A L+ + + + L Sbjct: 141 AWLRRWLPHPTAVVATLTGTRDGWGSTLATALRTIASEGLADAILPRSVIADQLGAFLAL 200 Query: 183 VLHQRESVQPR-RERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVV 241 + + R + ++ + + + + L P IA G+S R L+ +FA GL Sbjct: 201 IYGRPAQGIGRYQSEVLVRLKRHMQERLHDPELDPASIASSVGISKRHLHGLFAQTGLSF 260 Query: 242 AQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKF 300 + + RL+ A+ +R + + + GF++ SHFS F+ +FG+TP +YR +F Sbjct: 261 GAVLMDMRLERAAEMLRDRRFVGYRGCDVAWSCGFANASHFSRRFRVKFGVTPVDYRDEF 320 >UniRef50_C9PGF5 Transcriptional regulator AraC family n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PGF5_VIBFU Length = 258 Score = 189 bits (482), Expect = 7e-47, Method: Composition-based stats. Identities = 50/257 (19%), Positives = 105/257 (40%), Gaps = 9/257 (3%) Query: 46 LSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRP 105 +S + ++ + + ++ L A + Q + AGDI + D +P Sbjct: 2 ISRIRSTPIEY---GEMDDVEYSDDYFICLSLCPLACLTQAGVTSEQHAGDIVMYDNHQP 58 Query: 106 CSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALS 165 + + QI + +P L+ ++ + L D P+V +L+++ Sbjct: 59 FRYTFPQGDNQIVISVPHALVREHIKDCEAWLNVTLKRDAPLVSFVAAMLEQAWLTEEQE 118 Query: 166 ETESEAALQAMVCLLRPVLHQRESVQPRRERQ-----FQKVVTLIDDNIREEILRPEWIA 220 E + L+A++ +L ++ I+ + + L I+ Sbjct: 119 EVFGDQMLRAILMMLGTAFQAASGEASALVQRDKRNNLALAQHYIEQQLGDPALSVVSIS 178 Query: 221 GETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSH 280 MS R+L R+FA + V +++ +RL C + + ++ I + GFS+ H Sbjct: 179 SHLHMSARTLSRLFAKQNTSVMRWVWLQRLKACRRMLL-THQEMAISDIAYQQGFSNLPH 237 Query: 281 FSTVFKQRFGMTPGEYR 297 F+ +FK+++GMTP + R Sbjct: 238 FNKLFKEKYGMTPSQMR 254 >UniRef50_C9NEM0 Transcriptional regulator, AraC family n=1 Tax=Streptomyces flavogriseus ATCC 33331 RepID=C9NEM0_9ACTO Length = 323 Score = 189 bits (482), Expect = 7e-47, Method: Composition-based stats. Identities = 70/298 (23%), Positives = 124/298 (41%), Gaps = 9/298 (3%) Query: 9 FQQWLSQIN-QVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSD 67 W ++ ++ GR + L ++L ++ V LSRT V+ + Sbjct: 14 LAAWQREVGLRLAAVKAGRRQDGPFEASLTGVPLGYVRLLSLEADPVRLSRTPGLVESAP 73 Query: 68 DAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLE 127 V Q G A + QD R + G ++D RP SL +E + L +P L+ Sbjct: 74 ARAVAVVLQEHGHAALTQDGRSTVLEPGQAAVVDLRRPFSLDERERFRLRVLRVPDHALD 133 Query: 128 QYFPHQKPICAERLDADLPMVQLSHRLLQESM-NNPALSETESEAALQAMVCLLRPVL-- 184 + + L + L LL + + ++A LL ++ Sbjct: 134 VPAHSVRGVTGRALSPRDGVPALLVPLLARLAVTAGRIPPSVADALGGNTTDLLATLVHD 193 Query: 185 ----HQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLV 240 + R+R + V+ ID ++ + L PE IA +SVR L+R+F D+ + Sbjct: 194 ASDPDDDDHAGAARDRLVRSVLRHIDRHLGDPDLGPESIAAAHRISVRYLHRLFEDEAVT 253 Query: 241 VAQYIRNRRLDFCADAI-RHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 V++ ++ RR++ CA + R + ++ + WGF +HFS FK +G PG +R Sbjct: 254 VSRLVQRRRVEECAKELARRGSVSATVSAVSSRWGFHSPAHFSRAFKALYGHPPGRWR 311 >UniRef50_A8L0T7 Transcriptional regulator, AraC family n=3 Tax=Actinomycetales RepID=A8L0T7_FRASN Length = 298 Score = 189 bits (482), Expect = 8e-47, Method: Composition-based stats. Identities = 62/284 (21%), Positives = 107/284 (37%), Gaps = 11/284 (3%) Query: 25 GRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIME 84 + + G +D G + +T S ++ R+ ++ D +Y +E Sbjct: 6 ASDHADCFRGRIDVSGLSGTTVVALTFSPLSGRRSPALIRHHDPEDYYLFMVHGSPIRLE 65 Query: 85 QDERQVQIGAGDITLLDASRPCSLYWQESSKQ---ISLLLPRTLLEQYFPHQKPICAERL 141 Q + AGD+ L D S P + + + +Q + LPR L + L Sbjct: 66 QSGNVTCLTAGDMALFDTSHPLAADFLDHGRQKRVTLMRLPRASLPLPGGTTDCLLGNTL 125 Query: 142 DADLPMVQLSHRLLQESMNNPALSETESEAAL-----QAMVCLLRPVLHQRE--SVQPRR 194 P L + L N A + L V L + + V+ R Sbjct: 126 LTRTPTGALLGQFLSGFRENAAACGSAELHRLGRIGFDLAVTFLASHIDAQHTLPVETRE 185 Query: 195 ERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCA 254 ++ I+ N+ + LRP IA +SVR+L+++F + V+ IR RRL+ C Sbjct: 186 HVLRARIDAFIEHNLGDRGLRPATIAAHHHISVRTLHQLFQGQPETVSAMIRRRRLERCK 245 Query: 255 DAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 + + + I WGF + FS F+ +G P + R Sbjct: 246 VDLLNPQLRHHTIGDISARWGFRHPADFSRAFRAAYGAPPRDLR 289 >UniRef50_C6QB43 Transcriptional regulator, AraC family n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QB43_9RHIZ Length = 328 Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats. Identities = 60/304 (19%), Positives = 121/304 (39%), Gaps = 7/304 (2%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLLTE-RYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 + + F + + + ++ + + + LS + + R E Sbjct: 25 SARDGFSAFREIVAAAFMPWFMEHKSDQDFNARIVRLSGEFGSLSRTKMTPLLGLRNKSE 84 Query: 63 VKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRP--CSLYWQESSKQISLL 120 + S + Y + +SG+ ++ Q++ V GD+ L D++ P S + ++ Sbjct: 85 ISKSPEGSLYANYVISGRLVVTQNDVTVTAEKGDLVLYDSTLPVKHLKLGDTSFEDLAFC 144 Query: 121 LPRTLLEQYFPHQKPICAERLDADLPMVQLSHRL---LQESMNNPALSETESEAALQAMV 177 +P+ + + + ++D P+ L + + + + AAL + Sbjct: 145 IPKERIGRPDKTFDNLLVSKVDIIPPLASCFAFLSHNISSAQPEELAALGGACAALLPIS 204 Query: 178 CLLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADK 237 + +++V ID I + L P A G+SVR +++ FA Sbjct: 205 GGRSHEFRPDGIAEDASNHYARELVRFIDARIADAELCPSMAADNLGISVRYVHKQFAML 264 Query: 238 GLVVAQYIRNRRLDF-CADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEY 296 G + Y+ +RRL+ D I + ++ + + WGF D S F FK++FG +P EY Sbjct: 265 GTTFSSYVTSRRLERISHDLISGVGANPPISVLAYRWGFRDLSTFIRCFKRKFGCSPREY 324 Query: 297 RRKF 300 R KF Sbjct: 325 RSKF 328 >UniRef50_A6W014 Helix-turn-helix-domain containing protein AraC type n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W014_MARMS Length = 306 Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats. Identities = 65/295 (22%), Positives = 125/295 (42%), Gaps = 12/295 (4%) Query: 9 FQQWLSQINQVCGNFTGRLLTER--YTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGS 66 + + S+I +VCG F + G + T + V + V + R + ++ Sbjct: 14 VEMFTSEIRKVCGQFDVEPKSRTGMIDGGITTERFGTFDTAIVDINSVQIKRDKKAIRQD 73 Query: 67 DDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQ-ESSKQISLLLPRTL 125 +F+ + Q G + ++Q+E ++ GD+ L+D+ +P + S+QIS +PR Sbjct: 74 PGEYFFLLVQDLGCSHVQQEENITKLRPGDMFLVDSVKPSIFQYDNHRSRQISFHIPRDE 133 Query: 126 LEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPVLH 185 F + + D P+ H +L++ + + ++ A + L+ LH Sbjct: 134 AMHRFGNIG-YGGINISRDDPLWLAIHSVLRKMITAD---DVHQQSLGDAFLSLISAYLH 189 Query: 186 QRESVQ--PRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQ 243 +V E+ K + LID + P +A +S R+L R F G Sbjct: 190 TTYNVSHIEPNEQLLSKALALIDKHCLNASFSPRDVAYHLNISERTLQRHFQVLGETPRH 249 Query: 244 YIRNRRLDFCADAI---RHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGE 295 I N+RL+ + + +E + I + GF+D S+F F++++ TPG Sbjct: 250 RIINKRLEHAHTRLCLRKDGGLNESVTDIALNSGFNDLSYFYREFRKKYHTTPGA 304 >UniRef50_C7Q9A2 Transcriptional regulator, AraC family n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7Q9A2_CATAD Length = 335 Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 75/305 (24%), Positives = 130/305 (42%), Gaps = 9/305 (2%) Query: 1 MNPAVDNEFQQWLSQINQVCGNFTGRLL-TERYTGVLDTHFAKGLKLSTVTTSGVNLSRT 59 M+ +F +W I + T + + G + L ++ +T+ ++ RT Sbjct: 8 MDVPKTAQFARWRELICEAFLALTPESDLRDGFAGTVAQRQLAELSIARITSQRQHVRRT 67 Query: 60 WQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISL 119 +++ S +Y Q+ G ++M QD R + GD+ ++D +RP + +Q+ +Q+SL Sbjct: 68 TRDIDRSAYQGYYVNLQIRGSSLMTQDGRSTVLHPGDLAVVDTTRPFAFDFQDDFQQLSL 127 Query: 120 LLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCL 179 P+ LL A P + H LL + + LSE + + Sbjct: 128 YAPKALLLPGSGTPVTTATRVATAAGPGAAVRHALLS--LTSGDLSEDTAARLAAHACGI 185 Query: 180 LRPVLHQRESVQPRRERQFQ-----KVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMF 234 L L Q+ PR Q + ID+++ + L +A G+SVR LY +F Sbjct: 186 LSIALDQQTEPDPRSTPLRQDRLHAAALADIDEHLTDADLSAAAVAARLGVSVRLLYSVF 245 Query: 235 ADKGLVVAQYIRNRRLDFCADAIRHAAD-DEKLAGIGFHWGFSDQSHFSTVFKQRFGMTP 293 A + A +R RRLD +R A + I GF+D + F F++ +G TP Sbjct: 246 AGRRHSFASEVRRRRLDHTWRDLRDPARTHLCVIDIAVAAGFADVTSFHRAFRREYGRTP 305 Query: 294 GEYRR 298 + RR Sbjct: 306 AQVRR 310 >UniRef50_C3JNQ1 Putative transcriptional regulator n=1 Tax=Rhodococcus erythropolis SK121 RepID=C3JNQ1_RHOER Length = 324 Score = 188 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 59/299 (19%), Positives = 104/299 (34%), Gaps = 8/299 (2%) Query: 9 FQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSD- 67 W + + + G + LST + R + Sbjct: 26 IDYWREARRHAYVDVSTDPADPDFYGDVRLGRYTNFTLSTKRATAEQTHRNRSRIAQGRE 85 Query: 68 -DAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLP--RT 124 D + + FQ G ++EQ + G + + D+S P + +Q+ + +P R Sbjct: 86 QDEYLFATFQTRGSCVIEQAGHTAVVPPGSMVIYDSSLPFAFRADAPYEQVIVKVPADRA 145 Query: 125 LLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESE---AALQAMVCLLR 181 I A + M ++ Q + + + ++ A LL Sbjct: 146 FALAGIDRTTDILATTMSCAGAMSAVAAFFTQLAQHQDSDPHGAAQLETHASSLATSLLS 205 Query: 182 PVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVV 241 V R + + + +V+ I ++ + L E IA +S RSLYR+F V Sbjct: 206 LVTPVRSAAEIPAFLRRDQVLAYIHAHLADPDLDAERIATAMRLSRRSLYRLFQGTDHTV 265 Query: 242 AQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKF 300 Y+R R+ +R ++ I GFSD F F+ GMTP E+R + Sbjct: 266 MGYLRAARIQSAQHLLRK-YPSRPVSLIARQTGFSDPRTFYRAFRDTTGMTPNEHRERL 323 >UniRef50_UPI0001B551BF AraC family transcriptional regulator n=1 Tax=Streptomyces sp. C RepID=UPI0001B551BF Length = 302 Score = 188 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 52/240 (21%), Positives = 96/240 (40%), Gaps = 10/240 (4%) Query: 67 DDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLL 126 D Y + G + + + + D+ D +R L + E + I +PR L Sbjct: 42 DRTHVYLGVHVRGPVTVVHERAKSLLEPNDLVFCDPARRHLLQFGEDCQMIFFRVPRCYL 101 Query: 127 EQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETE-----SEAALQAMVCLLR 181 + + + L+ L + + A+ + L+ Sbjct: 102 GVTESELNQVLGVPVRGGKGIGALASDFLTALAAKAEFRRSTIGDRRARTAVHLLSVLVM 161 Query: 182 PVLHQR-----ESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFAD 236 +L + ++ I++++ + L PE IA +SVR L ++F + Sbjct: 162 ELLEADTTDEADDASGAVNEMLSRIRAYIEEHLMDPDLSPESIARAHHISVRYLQKLFQN 221 Query: 237 KGLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEY 296 G V+Q++R RRLDFC + ++ +A + WGFS SHFS F+ +GM+P E+ Sbjct: 222 DGSTVSQWVRERRLDFCRLELGRSSRRITMAAVAHRWGFSSPSHFSRTFRGAYGMSPSEW 281 >UniRef50_B9NWW0 Putative transcriptional regulator n=1 Tax=Rhodobacteraceae bacterium KLH11 RepID=B9NWW0_9RHOB Length = 356 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 55/297 (18%), Positives = 116/297 (39%), Gaps = 14/297 (4%) Query: 5 VDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVK 64 ++F + ++ VC + + G+ + RT +++K Sbjct: 20 AADQFDAFSLIVSPVCDLKRLSSINSGFHAKFSAFDLHGIDFVSWEVDPSTYERTREKIK 79 Query: 65 GSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRT 124 S F +G E + V+ GD+ L+ ++P + S +S+ + Sbjct: 80 NSSFDSCAIWFVRNGHIFNEHNNDLVKAETGDLMLISHAQPWKSHCVGRS-FVSVGINCD 138 Query: 125 LLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPA-LSETESEAALQAMVCLLRPV 183 +P+ D + L + ++ ++E + Q+ LL Sbjct: 139 KYSWMTSCNRPLL------DGSLKGLLRTFIAMLVDEAHNITEDQKPMLAQSFSDLLAAS 192 Query: 184 LHQRE-----SVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKG 238 + + + + V + ++ L ++I G+S R+LY +F + G Sbjct: 193 IEPTAENRYYATTALNTSRLKIVRDFVQRHLERPELNVDFICKSLGVSRRTLYNIFEEYG 252 Query: 239 LVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGE 295 VA+YI+ RL C A+ + D + ++ I + +GF++ S FS FK+++G +P E Sbjct: 253 G-VAKYIKTARLQACYKALSNNNDQKYVSTIAYQYGFTNISLFSRQFKEQYGFSPRE 308 >UniRef50_Q0S130 Transcriptional regulator n=1 Tax=Rhodococcus jostii RHA1 RepID=Q0S130_RHOSR Length = 315 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 54/296 (18%), Positives = 109/296 (36%), Gaps = 6/296 (2%) Query: 6 DNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKG 65 W Q++ + L + Y G L ++ +L LSRT +++ Sbjct: 15 RERGDWWRDQVSSIHCPMAFSL-ADSYRGTLQHQYSDTYQLVRWWGEAEVLSRTAADIRR 73 Query: 66 SDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTL 125 + + + G+ I+EQD R+ I + L L + ++ ++PR Sbjct: 74 HPHGAYELLLPVRGEVILEQDRREATITPAVMALTSLDTATVLRHGDGFSSVAFVIPRER 133 Query: 126 LEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPA-LSETESEAALQAMVCLLRPVL 184 +E P P LDA + ++ ++ L+ ++ +A +V L+ Sbjct: 134 IEARVPTLPP-AGTVLDATSGLGRIVVDVVSSLRRERHELTGSQFDAIADRIVDLVALAY 192 Query: 185 HQRESVQP--RRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVA 242 + + +E + + +N + L +A G S+R + G + Sbjct: 193 NADTAAPSVDVQEGLVTAIRRFVRENAHDPNLTGAVVATRLGWSLRHVQAQLQRIGTTPS 252 Query: 243 QYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 IR RL ++ + + + + GF D S FS +++ FG P + R Sbjct: 253 DLIREERLALARLRLQDRGWSHQSVTQVAYSSGFGDLSTFSNAYRRAFGERPSDTR 308 >UniRef50_Q38ZV0 Transcriptional regulator, AraC family n=3 Tax=Burkholderia cepacia complex RepID=Q38ZV0_BURS3 Length = 368 Score = 188 bits (477), Expect = 2e-46, Method: Composition-based stats. Identities = 57/293 (19%), Positives = 108/293 (36%), Gaps = 7/293 (2%) Query: 12 WLSQINQVCGNFTGRLLTER-YTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAW 70 W QI T + +D +++ ++ S + S K + Sbjct: 62 WSEQIRHRFFPLELNAGTSGEFDANVDVFDHARCRVARISASAHSASIGRDACKTLKHRY 121 Query: 71 FYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYF 130 ++QLSG A +EQ +V + G TL +AS P + + +++L + Sbjct: 122 VKVIWQLSGVARLEQGACEVIVPPGHFTLYEASSPYWIQSDAHGEFVTMLCEVADHDALL 181 Query: 131 PHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPVLHQRESV 190 + + L ++ L+ + LL + + Sbjct: 182 ALARHAIGRAMPTTGGAAVALASLQAMIAEGRRMNPRSRFGVLELVATLLAETIDFTDGT 241 Query: 191 QPR-----RERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYI 245 P RE + I ++ + L P+ IA + R+LY+ F G I Sbjct: 242 APASRRKIRETLLRDAQQYIHRHLDDGELSPDRIAAALKVCRRTLYQAFESIGERPQAMI 301 Query: 246 RNRRLDFCADAIRHAADD-EKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 + RL+ C + + D + + GFSD ++F+ +F++RFG+TP + R Sbjct: 302 QRLRLEKCHEVLSQTGADGASITRLALQSGFSDPAYFARLFRRRFGVTPSQCR 354 >UniRef50_B6A2N3 Transcriptional regulator, AraC family n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2304 RepID=B6A2N3_RHILW Length = 314 Score = 188 bits (477), Expect = 3e-46, Method: Composition-based stats. Identities = 59/269 (21%), Positives = 106/269 (39%), Gaps = 5/269 (1%) Query: 35 VLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGA 94 + + +L+ + + + D + Q G A + Q + + Sbjct: 42 SMLSAMLGACRLTRLEADRHVVFGERVTAEPDDPDAIKLILQTEGSASITQGGLHAPVSS 101 Query: 95 GDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRL 154 + + D RP L +Q+ L LPR L Q + + M + L Sbjct: 102 NALVIYDPRRPYVLTNSTPVRQLLLQLPRQALPQAAVERLAVPFTAHAEHDGMCGILLSL 161 Query: 155 LQESMNN-PALSETESEAALQAMVCLLRPVLHQRESV---QPRRERQFQKVVTLIDDNIR 210 ++ +M+ L E + Q M+ L+R ++ + + ++ I NI Sbjct: 162 METTMHEISHLDEARRSSVGQTMIDLVRTMIGDGATAGLVANPLDLLLARIKDFIAGNIA 221 Query: 211 EEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAADDE-KLAGI 269 L IA G SVR +YR F + L + YI + RL A +R A +++ I Sbjct: 222 RPDLTVAMIARRMGCSVRYVYRAFEAERLTPSDYIWDLRLQQAAAKLRAAGGHSGEISEI 281 Query: 270 GFHWGFSDQSHFSTVFKQRFGMTPGEYRR 298 F GFS +HFS F+ R+ ++P ++R+ Sbjct: 282 AFALGFSSSAHFSRAFRARYTVSPSQWRK 310 >UniRef50_B5WCL9 Transcriptional regulator, AraC family n=1 Tax=Burkholderia sp. H160 RepID=B5WCL9_9BURK Length = 338 Score = 188 bits (477), Expect = 3e-46, Method: Composition-based stats. Identities = 50/304 (16%), Positives = 107/304 (35%), Gaps = 8/304 (2%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLLTER-YTGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 W + R R + + L + + + R E Sbjct: 18 PAARRLDIWADLLTSAMIPLYVRSTNPRAFESTMSVAACGPLTVVRQSGTPHVCGRGRSE 77 Query: 63 VKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLP 122 + S ++ + L+ + + GD+ L+D+ C + + +++ +P Sbjct: 78 LARSSQRQYHLMMSLNHTYRLSHRNDLY-LSPGDLALVDSDLVCDIALIRWYEFLNIGIP 136 Query: 123 RTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQES----MNNPALSETESEAALQAMVC 178 L+++ P + R+ + + + N + + A++ Sbjct: 137 VEWLKRWVPDAGCLVGRRIPGHSNWGAALSAYVTQLVPEALANAPIPRGVLADQIGALLA 196 Query: 179 LLRPVLHQRESVQ-PRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADK 237 L+ + +E P +V + E L E +A G+SVR+L+R A Sbjct: 197 LIAHEMSGQEPHSKPADRSLRDRVSDCLAQRCHEHGLTAEAVADSLGISVRTLHRALAGC 256 Query: 238 GLVVAQYIRNRRLDFCADAIRHA-ADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEY 296 A+ + + R++ + + IG GF+D SHF+ V ++R G+TP + Sbjct: 257 QQTFAEQLLDARVNCAQRMLESKIFSRMTVGEIGRRAGFADPSHFTRVMRRRLGVTPLQL 316 Query: 297 RRKF 300 R + Sbjct: 317 RIRC 320 >UniRef50_D0XXU2 Transcriptional regulator, AraC family n=1 Tax=Caulobacter segnis ATCC 21756 RepID=D0XXU2_9CAUL Length = 341 Score = 187 bits (476), Expect = 3e-46, Method: Composition-based stats. Identities = 56/306 (18%), Positives = 116/306 (37%), Gaps = 13/306 (4%) Query: 2 NPAVDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAK-GLKLSTVTTSGVNLSRTW 60 + + W + ++ G E + + G++ + V + + Sbjct: 10 SHPRAERAEAWRDAMGRLGLPIEGLSAGEPAAASVICLTSPLGIEFALVEAGAQTI--SG 67 Query: 61 QEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLL 120 + A + L G+A + D+ V + GDI + +L S+ + + Sbjct: 68 RL--SGQPAAVWLAVLLHGEATLVTDDLAVGVSPGDIAFGPTGQAAALRLDTRSRLLFVR 125 Query: 121 LPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN------PALSETESEAALQ 174 PR L+ + L+ + ++ LL+ + L + Sbjct: 126 APRVALDHRLIKPFNLRVGWLEGSEGVPRILSDLLRGTAEELENLSVDQLRPVDLALTEF 185 Query: 175 AMVCLLRPVLHQRESVQPRRE-RQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRM 233 CLL +++ P Q++ I+ + + L +A E G+S R + ++ Sbjct: 186 LAQCLLERGAAASDALDPSTPTAHLQRLCQTIETLLPDPDLSLRRVADEEGVSPRYVQKL 245 Query: 234 FADKGLVVAQYIRNRRLDFCADAIRHA-ADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMT 292 FA + Y+R+RRL+ C + ++ I F WGF+ +HFS F++++G + Sbjct: 246 FASANETFSHYLRSRRLERCRIDLASPQHARLSISEICFRWGFNGSAHFSRAFREQYGRS 305 Query: 293 PGEYRR 298 P E+R Sbjct: 306 PREFRN 311 >UniRef50_B8HJB6 Transcriptional regulator, AraC family n=1 Tax=Arthrobacter chlorophenolicus A6 RepID=B8HJB6_ARTCA Length = 292 Score = 187 bits (476), Expect = 3e-46, Method: Composition-based stats. Identities = 57/293 (19%), Positives = 102/293 (34%), Gaps = 8/293 (2%) Query: 12 WLSQINQVCGNFTGR-LLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAW 70 W + R L L+++ V + + R+ +E+ Sbjct: 2 WEEHNARALVGLQARTLAGGGLKATELNLNLPRLQVAQVWGNPHVVERSAREIAAHPADA 61 Query: 71 FYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYF 130 F L G+ + + G+ L DA +P + K+++L +PR+ L + Sbjct: 62 VVAYFTLEGEGFFYHQDGCEILRPGEAILYDADQPFMRGFSHGLKELALKIPRSTLRELT 121 Query: 131 PHQKPICAERLDADLPMVQ--LSHRLLQESMNNPALSETESEAALQAMVCLLRPVLHQRE 188 + P + + L + + + + LL L Sbjct: 122 RQSGLKRPKVFGFHGPQAERIYAGALASSLGAALSGRAGDWDELENTALELLAVTLGAPA 181 Query: 189 SVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNR 248 I + L IA G+S R L R+FA+ G V + I N Sbjct: 182 GPAG----HLAAAQAFISLQSADPQLSAGRIAAAVGISERQLSRIFAEGGTSVPRAILNA 237 Query: 249 RLDFCADAIRHAADDE-KLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKF 300 RL+ + A L+ + GF+ Q+HFS V+K++FG++P + RR Sbjct: 238 RLEAARQQLLSPAAARIPLSALALQQGFASQAHFSRVYKEKFGLSPLQDRRSA 290 >UniRef50_C3JMU3 Transcriptional regulator, AraC family n=2 Tax=Rhodococcus erythropolis RepID=C3JMU3_RHOER Length = 307 Score = 187 bits (476), Expect = 4e-46, Method: Composition-based stats. Identities = 60/301 (19%), Positives = 119/301 (39%), Gaps = 7/301 (2%) Query: 5 VDNEFQQWLSQINQVCGNFTGRLL-TERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEV 63 D ++ + + L ER + ++ L ++G+ L+RT + V Sbjct: 4 PDQRADAFVDAMGRASVPCAIHLENPERVSARMNVWNLGAASLFRSESTGMRLTRTPRHV 63 Query: 64 KGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPR 123 + + Q SG ++Q + Q ++ AG++ + D + W + L +P Sbjct: 64 RSASMPVLAIALQESGIGHLDQHDEQRRVPAGELLMTDLTSTYDFSWPGTGASQCLYVPM 123 Query: 124 TLLEQYFPHQKPICAERLDAD--LPMVQLSHRLLQE--SMNNPALSETESEAALQAMVCL 179 L + ++ M+ L + + +E EA+++ L Sbjct: 124 DRLGLPIDTVRDAATRPHHSNLYPVMIAHVRELFRSAALLETDPAAEQLGEASIELARAL 183 Query: 180 LRPVLHQRESVQPRRERQ-FQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKG 238 + + H R + I +++ + L P IA +S+R LY++ +D G Sbjct: 184 VTSIAHANPDASAPRSALAMTSIRRYIREHLHDPTLNPARIAHAHNISLRQLYKICSDNG 243 Query: 239 LVVAQYIRNRRLDFCADAIRHAAD-DEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 + Q+I +RL D + A D +A + GF D HFS F+Q +G++P +R Sbjct: 244 FRIEQWIITQRLQKARDELARPATVDLPIATVAHRAGFVDAGHFSRRFRQAYGLSPTRWR 303 Query: 298 R 298 + Sbjct: 304 Q 304 >UniRef50_UPI0001909644 transcriptional regulator, AraC family protein n=1 Tax=Rhizobium etli CIAT 894 RepID=UPI0001909644 Length = 315 Score = 187 bits (475), Expect = 4e-46, Method: Composition-based stats. Identities = 64/270 (23%), Positives = 108/270 (40%), Gaps = 6/270 (2%) Query: 35 VLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGA 94 + + +L+ + + D + Q G A ++Q I A Sbjct: 42 RMVSAMLGACRLTRLEVDRHIVFGEHATAGPDDPDSIKLLVQTEGDACLDQGGLHAPISA 101 Query: 95 GDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRL 154 + + D SRP L +Q+ L LPR L + M ++ L Sbjct: 102 DALVIYDPSRPYMLTNSTPVRQLLLQLPRHALPHAAIERLTRPFTAHAEYDGMCRILLSL 161 Query: 155 LQESMNN-PALSETESEAALQAMVCLLRPV----LHQRESVQPRRERQFQKVVTLIDDNI 209 + +M+ L + Q MV L+R + L Q + + Q++ I+ + Sbjct: 162 MDSTMHEIGHLDAARRSSVGQTMVDLVRTMIGADLQQARPIANPLDLLLQRIKIFIESEL 221 Query: 210 REEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAAD-DEKLAG 268 L IA G SVR +YR F + L + YI + RL A +R A +++G Sbjct: 222 ARPDLSVTMIARRMGCSVRYIYRAFEVECLTPSDYIWDLRLQKAAARLRDAGGYAGEISG 281 Query: 269 IGFHWGFSDQSHFSTVFKQRFGMTPGEYRR 298 I F GFS +HFS F+ R+G++P ++R+ Sbjct: 282 IAFALGFSSSAHFSRAFRHRYGLSPSQWRK 311 >UniRef50_D1TAE4 AraC family transcriptional regulator n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1TAE4_9BURK Length = 326 Score = 187 bits (475), Expect = 4e-46, Method: Composition-based stats. Identities = 63/305 (20%), Positives = 123/305 (40%), Gaps = 13/305 (4%) Query: 4 AVDNEFQQWLSQINQVC-GNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 A + W +++ + R L + + G +DT+ A G+ + T V +R+ Sbjct: 16 APRGQLPMWRERVSHFLDVPISRRQLADGFRGSIDTYRAGGMAFTDCRTDPVAQTRSVAR 75 Query: 63 VKGSDDAWFYTVFQLSGQAIMEQD---ERQVQIGAGDITLLDASRPCSLYWQESSKQISL 119 + + + G +R + LD ++P + + ++L Sbjct: 76 ISTDNVRQIVFHVAVEGTFETTTGLYPKRVALQTRPSVLALDMNQPMQMTL-GPCRLVAL 134 Query: 120 LLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN-PALSETESEAALQAMVC 178 LPR L++ P + I ++ P+ +L L + P + ++ AL Sbjct: 135 FLPRHLIDPVLPEAESIHGRMIEYQTPLARLIPAHLDDLCRRLPTMDARAAQEALHTCGL 194 Query: 179 LLRPVLHQRESVQP-----RRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRM 233 L+ + + R F ID N+ + L + + + +S +LYR+ Sbjct: 195 LMAAAFGKETGLTGGARAVARTAMFAAARRYIDANLGQPDLTVDSVLAMSQLSRPTLYRL 254 Query: 234 FADKGLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTP 293 F +G + YIRNRRL AD + H + + + WGF+ S F+ F++ + M+P Sbjct: 255 FEPEGG-LHAYIRNRRLREAADEL-HRHPRRPVIDVAYGWGFNSASDFNRAFRRAYDMSP 312 Query: 294 GEYRR 298 G++R Sbjct: 313 GDFRA 317 >UniRef50_Q0RZY7 Transcriptional regulator, AraC family protein n=1 Tax=Rhodococcus jostii RHA1 RepID=Q0RZY7_RHOSR Length = 310 Score = 187 bits (475), Expect = 4e-46, Method: Composition-based stats. Identities = 62/294 (21%), Positives = 117/294 (39%), Gaps = 8/294 (2%) Query: 12 WLSQINQVCGNFTGRLLTERYTGVLDTHFAK-GLKLSTVTTSGVNLSRTWQEVKGSDDAW 70 W I+ + +R+ G LD G+ L+ V T ++ RT + Sbjct: 12 WTRMISDTFIELGVKEADDRFRGALDQRELGRGVSLTRVETDPSHVLRTPRL-TRDGCDD 70 Query: 71 FYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYF 130 + +SG + +D +Q + +G +L AS P L + +S+++ L PR LL Sbjct: 71 VLFLMHVSGDGAVVKDGQQTPMPSGYGSLHAASDPYELKFATASREVVLQTPRRLLPSRE 130 Query: 131 PHQKPICAERLDADLPMVQLSHRLLQESMN-----NPALSETESEAALQAMVCLLRPVLH 185 Q + P +++ QE + L E + A+ ++ +L Sbjct: 131 FEQLHRGPTGIAPQDPAMRVLWSFTQELLTVSNDLPTPLREEMGQTAVDLLLSVLHHRSL 190 Query: 186 QRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYI 245 + + E +Q + LI +N + E A + +S+R +F G+ A ++ Sbjct: 191 EESAKAVGPEAIYQSIKRLIRENACDPRFTIEVAAEQHHISLRYTQTLFTRSGMSPATFL 250 Query: 246 RNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRR 298 R+ R+ + D + + + GF D + F FK+ G+TPG +R Sbjct: 251 RSERIANAQRLLADPRQSDIPVESVAYRSGFVDVNTFIRAFKRAVGVTPGVWRA 304 >UniRef50_Q0FYH5 Transcriptional regulator, AraC family protein n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0FYH5_9RHIZ Length = 344 Score = 186 bits (474), Expect = 6e-46, Method: Composition-based stats. Identities = 65/300 (21%), Positives = 123/300 (41%), Gaps = 9/300 (3%) Query: 5 VDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVK 64 D+ + + S G R+ ++ + + + SGV+ R+ Q+++ Sbjct: 24 PDDAAEAYRSLYA---GGSDVRIADRAFSARFEARTVGPIVIFDRWLSGVSHERSTQKIR 80 Query: 65 GSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRT 124 F L G+ ++ + I G+I LLDA+RP +++ +++ + R Sbjct: 81 TDGFEHFVLQANLGGELVVTTPDATKIIRPGEIALLDAARPYVNRC-DAAHIVTMSVARH 139 Query: 125 LLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPVL 184 ++E + L + + L ++ N LS + A + A+ LL Sbjct: 140 VIENAIGDGLDLHGRILGSATAAL-LLDFMVSVHRNANKLSLDAAPALIDALSSLLSIAA 198 Query: 185 HQRESVQ---PRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVV 241 S + ++ N+ + L PE IA G+S LY++F G V Sbjct: 199 SPNSSAASFSDVSPDKLVAAKRIVRANLGDRRLDPEKIAIMAGVSRSKLYQLFKPSGG-V 257 Query: 242 AQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKFR 301 Y++ +R+ + + +A + + GF+ +SH S +FK FGM PGEYR+ R Sbjct: 258 DAYLQAQRVRRLKHLLSRPRETRGIAELVYLCGFASESHASRMFKTMFGMPPGEYRKTQR 317 >UniRef50_B0T4I1 Transcriptional regulator, AraC family n=1 Tax=Caulobacter sp. K31 RepID=B0T4I1_CAUSK Length = 316 Score = 186 bits (473), Expect = 8e-46, Method: Composition-based stats. Identities = 55/309 (17%), Positives = 119/309 (38%), Gaps = 14/309 (4%) Query: 2 NPAVDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAK-GLKLSTVTTSGVNLSRTW 60 + + W ++++ G E + + + G++ + V + + Sbjct: 10 SHPRAERAEAWREAMSRLGLPIEGLSDAEPASASVVCLTSPLGIEFALVEAGAQAI--SG 67 Query: 61 QEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLL 120 + A + LSG+A + D+ ++ GDI + +L + + + + Sbjct: 68 RL--SGQPAAVWLAVLLSGEAALVTDDLAEELTPGDIAYGPTGQAAALRLETRCRLMFVR 125 Query: 121 LPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN-PALSETESEAALQAMVCL 179 PR L+ + RL+ + + LL+ + + L+ + A+ Sbjct: 126 APRVALDHRLIAPVNLRVGRLECATGVAHILSGLLRATADGLEDLTVDQLRPVELALTEF 185 Query: 180 LRPVLHQRESV-------QPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYR 232 L L + + Q++ I+ + + L +A E G+S R + + Sbjct: 186 LAICLVEGGATTDILGAGSGAPTAHLQRLCQTIETLLPDPDLSLRRVADEEGVSPRYVQK 245 Query: 233 MFADKGLVVAQYIRNRRLDFCADAIRHA-ADDEKLAGIGFHWGFSDQSHFSTVFKQRFGM 291 +FA + Y+R RRL+ C + ++ I F WGF+ +HFS F+ ++G Sbjct: 246 LFASADETFSHYLRTRRLERCRTDLASPQHARLSISEICFRWGFNGSAHFSRAFRDQYGQ 305 Query: 292 TPGEYRRKF 300 +P E+R+ Sbjct: 306 SPREFRQSA 314 >UniRef50_B1JB60 Transcriptional regulator, AraC family n=1 Tax=Pseudomonas putida W619 RepID=B1JB60_PSEPW Length = 389 Score = 186 bits (472), Expect = 9e-46, Method: Composition-based stats. Identities = 74/305 (24%), Positives = 123/305 (40%), Gaps = 16/305 (5%) Query: 1 MNPAVDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTW 60 M + FQ+W N + + L + + + Sbjct: 26 MEHSFQGCFQRW---------NLSSSAELTEFQRKLRANGLGVVSQVHIVVDPCVGRFPL 76 Query: 61 QEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLL 120 + D+ + LSG+ M Q Q+ AGD+ + + R E + +SL+ Sbjct: 77 AYSQWGDELYIALQLHLSGRVRMRQWGEQIC--AGDMFVWRSDRRQDYEVLERACSVSLM 134 Query: 121 LPRTLLEQYFPHQ-KPICAERLDADLPMVQLSHRLLQESMNN-PALSETESEAALQAMVC 178 +P LL +Y P + +P A R+D + L R L A+ + + ++ Sbjct: 135 IPWQLLREYLPGRKQPPSACRIDTRTGVGSLLSRHLVGLSEEIDAVPPSAHFTLCRTVIG 194 Query: 179 LLRPVLHQRESVQ--PRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFAD 236 LL L + + ++V++ I ++ E+ L P IA G+SVR L+ +FA Sbjct: 195 LLDIALPEPPCASKLTAKNALRERVLSYIAQHLHEDNLIPTRIAAAQGISVRYLHALFAQ 254 Query: 237 KGLVVAQYIRNRRLDFCADAIRHAAD-DEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGE 295 V +I RL C + A +++ I F WGF+ SHF FKQ FGM+P E Sbjct: 255 SDTTVVGHILESRLYACRQTLADPACKHLQISEIAFRWGFNSTSHFCRTFKQFFGMSPSE 314 Query: 296 YRRKF 300 RR+ Sbjct: 315 LRRRA 319 >UniRef50_B1M4E1 Transcriptional regulator, AraC family n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1M4E1_METRJ Length = 346 Score = 186 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 57/306 (18%), Positives = 100/306 (32%), Gaps = 9/306 (2%) Query: 2 NPAVDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQ 61 + W + R + G + + SG+ R Sbjct: 12 ESPGPRQADDWRDAVAPFWDFTIRREDLSDFRGQSRVRHLGTAIVCSARASGLEFVRARA 71 Query: 62 EVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLL 121 ++SGQ+ + R+ GDI L D S+P S + I+L+L Sbjct: 72 LTARMGVDHIVAHMRVSGQSRVTIGGRERDCAPGDICLFDLSQPLS-AASTDYEAITLVL 130 Query: 122 PRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMN------NPALSETESEAALQA 175 PR L + + P ++ + L+ P + A Sbjct: 131 PRPLFGARQSALDALHGSVIRGATPFGRMLNDHLRSLSAHATGFSEPEAAAAAEATAALL 190 Query: 176 MVCLLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFA 235 L + + P R + ++ + L E I G+S +LYR+F Sbjct: 191 GAATLGLPQDEGGTQPPERAPLLVAIRRFVEAELASADLSAETIGLRFGVSRSALYRLFV 250 Query: 236 DKGLVVAQYIRNRRLDFCADAIRHAADD-EKLAGIGFHWGFSDQSHFSTVFKQRFGMTPG 294 G V+ YIR RRL + +++ + + W F +HF+ F+ FG P Sbjct: 251 PLGG-VSGYIRQRRLARAYRDLAAGDGRFARISEVAYRWRFESPAHFTQAFRAEFGCAPR 309 Query: 295 EYRRKF 300 + R + Sbjct: 310 DVRAQA 315 >UniRef50_C6XP47 Transcriptional regulator, AraC family n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XP47_HIRBI Length = 304 Score = 186 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 54/289 (18%), Positives = 110/289 (38%), Gaps = 13/289 (4%) Query: 21 GNFTGRLLTERYTGVLDTHFAK-GLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSG 79 F + G + G++L+ + S + + + + G Sbjct: 1 MPFAPDSPSVPVDGRISVVATPMGVQLARIEASPLIIEGKEA----DQGPGLWLLLISEG 56 Query: 80 QAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAE 139 +A + + I G + L + S + I + +P ++ + Sbjct: 57 EAEFKSKDLCAAIRPGRVLFGVTRHDSKLELKTSCRMIFIRIPTLVIGRRMLAPLRNNTG 116 Query: 140 RLDADLPMVQLSHRLLQESMNNP-----ALSETESEAALQAMVCLLRPVLHQRE--SVQP 192 + + ++ LLQE N + + +V L R Sbjct: 117 LFKGENSLERILISLLQEIYNELEKFTKDELAAIETSLVDIIVTALATSGGGRSKGGAMG 176 Query: 193 RRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDF 252 R F ++ +++ + E L + +A ETG+S R L ++F+ + + Y+R RRL+ Sbjct: 177 ARAAHFDRICQMLESLLGEPELTLDRVARETGVSPRYLQKIFSQENYSFSMYVRERRLER 236 Query: 253 CADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKF 300 C + + + + F WGFS +HFS F++RFG++P ++R+K Sbjct: 237 CYADLISPLYSQQSITQVAFRWGFSSSAHFSRTFRERFGVSPRQHRQKL 285 >UniRef50_D1WYT1 Transcriptional regulator, AraC family n=2 Tax=Streptomyces RepID=D1WYT1_9ACTO Length = 331 Score = 186 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 65/307 (21%), Positives = 107/307 (34%), Gaps = 13/307 (4%) Query: 5 VDNEFQQWLSQINQVCGNFT-GRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEV 63 + F W +N + + + + L RT + + Sbjct: 14 PGDRFAGWQQYMNSMIAPMEITSSHADDFWADHRLLRIEDTLLWPARLHASCFRRTPRLI 73 Query: 64 KGSDDAWFYTVFQL--SGQAIMEQDERQVQIGAGDITLLDASRPC-SLYWQESSKQISLL 120 + SD + L SG +EQ + + A D+ LD SRP E + + Sbjct: 74 RQSDPGLLHMTLVLPGSGAMHVEQGRVRSAVEAHDLYFLDTSRPSGVWTDGEPIVGVGVD 133 Query: 121 LPRTLLEQYFPH-QKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCL 179 +PR+LL + RL L + + ++ A L ++ Sbjct: 134 IPRSLLPLPMDTCLDEVLGRRLSGRHGFGALLTQFVTHLVDRAEEYGPADVARLHRVLLD 193 Query: 180 LRPVLHQRE-------SVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYR 232 L E + R + + I N + L P +A +S R L+R Sbjct: 194 LAAGALAGELDRETALPPEARTGNLVLAIRSFIGSNFHDPGLTPGTVAAAHYISTRQLHR 253 Query: 233 MFADKGLVVAQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGM 291 +F +G VA IR+RRL+ + D + I GF +HFS VF+ GM Sbjct: 254 LFHREGTTVATLIRSRRLERARLDLADPRLVDTPVQTIAARCGFGAPAHFSRVFRAAQGM 313 Query: 292 TPGEYRR 298 +P +YR Sbjct: 314 SPRDYRE 320 >UniRef50_C4WLC6 Helix-turn-helix domain-containing protein n=1 Tax=Ochrobactrum intermedium LMG 3301 RepID=C4WLC6_9RHIZ Length = 370 Score = 185 bits (471), Expect = 1e-45, Method: Composition-based stats. Identities = 79/300 (26%), Positives = 123/300 (41%), Gaps = 11/300 (3%) Query: 8 EFQQWLSQINQVCGNFTGR-LLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGS 66 W + R G + + G L++VT + +R + + S Sbjct: 36 RNDFWREASRPFYETTPIPGSKSGRLEGAIRSREIAGFTLASVTFNSQRYNRDRRIIAWS 95 Query: 67 DDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLL 126 F G+ + + + +GDI +LD ++ +S L+PR +L Sbjct: 96 GLDQFLVAVVKGGEILGDAANNSLTARSGDICILDLTQVLQSDVTAGG-TLSTLIPRGIL 154 Query: 127 EQYFPHQKPICAERLDADLPMVQLSHRLLQES-MNNPALSETESEAALQAMVCLLRPVLH 185 + H + L A LPM QL L+ + LS E A +++V +L L Sbjct: 155 AKATGHA-NLHGVVLQAHLPMTQLITAYLEGLNGLSEHLSNDEIVAVQESLVTILAAALQ 213 Query: 186 Q-----RESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLV 240 E ++P Q+V+ +D N+ L + I +S LYR FA+ G Sbjct: 214 GLRATGIEELRPLSIALRQRVLDYVDRNLNNPELSLDLIIRRFNVSRAHLYRAFAEDGG- 272 Query: 241 VAQYIRNRRLDFCADAIRHAAD-DEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRK 299 +A IR+RRLD I +A I F GFS SHFS F++RFG+ PGE RR+ Sbjct: 273 IAGVIRDRRLDAAFLEITQTDMIPRSIAKIAFEHGFSSASHFSRSFRERFGLMPGEARRE 332 >UniRef50_B3Q8F7 Transcriptional regulator, AraC family n=3 Tax=Rhodopseudomonas palustris RepID=B3Q8F7_RHOPT Length = 352 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 58/305 (19%), Positives = 105/305 (34%), Gaps = 13/305 (4%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEV 63 + F W + V L + SG SRT + V Sbjct: 22 PARDRFDAWREYLRPVADLAPAADGVGTSAIDLACWDLGSFAMCQERNSGTRFSRTLRRV 81 Query: 64 KGSDDAWFYTVFQLSGQAIMEQDE-----RQVQIGAGDITLLDASRPCSLYWQESSKQIS 118 K +Y +G + D ++++ G ++L + + Sbjct: 82 KTVFADHWYLFLIKAGSNWVVSDGGWSSGQEIRGAPGQLSLYSLGEAFHGEM-NPIEVLM 140 Query: 119 LLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVC 178 L +PR + + +DA + LS +L P L+ E A ++A Sbjct: 141 LFIPRDAFARQAGRLDRLNNTIIDATRGRL-LSDYMLALERQLPNLTHDEVPAIVRATEA 199 Query: 179 LLRPVLHQRESVQPRRERQF-----QKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRM 233 ++ L ++ ++ + + L P +A G+S +LYR+ Sbjct: 200 MIAACLTPTPHSLEDARDGVILSLGERARKVVQARLYDPRLTPACLAKSIGVSRSALYRL 259 Query: 234 FADKGLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTP 293 F G A+Y+RN RL A+ + ++ I +GF+ FS F+ R+G +P Sbjct: 260 FEPHGGA-ARYVRNTRLAAAHRALCDLTETRQIQQIAGSFGFTSSQEFSRAFRLRYGYSP 318 Query: 294 GEYRR 298 E R Sbjct: 319 SELRA 323 >UniRef50_C8X8B4 Transcriptional regulator, AraC family n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8X8B4_NAKMY Length = 313 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 68/296 (22%), Positives = 113/296 (38%), Gaps = 8/296 (2%) Query: 6 DNEFQQWLSQINQVCGNFT----GRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQ 61 + W ++ ++ + + + L L + R Sbjct: 15 AEAYDAWSRMLSTTHLPWSITELVQDPQTGFGASVRRRHLADLVLVDCSCDPNAGVRGSH 74 Query: 62 EVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLL 121 E+ G+D + + L G+ ++ Q E Q + G + + D+ P +E + SLL+ Sbjct: 75 EIAGTDGGYLVMLMTLRGREVVRQGESQAALEPGSVVVWDSETPAEFLVREPLVKRSLLV 134 Query: 122 PRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN-PALSETESEAALQAMVCLL 180 P+ L + + + LDA P V L L L AA A + LL Sbjct: 135 PKAALAEVGARGELMTGSVLDATAPAVTLLSGYLDALSATIDQLPLGALPAARNATIELL 194 Query: 181 RPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLV 240 L + V ID ++R++ L ++ G+SVRSL+R F D G Sbjct: 195 AAALQEPVRVPQATAATRTVAEAYIDKHLRQQRLSAAEVSRAVGVSVRSLHRAFEDSGES 254 Query: 241 VAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEY 296 VA +IR R A A + + W ++D SHFS FK+ FG+ P + Sbjct: 255 VASFIRLR---RLARARDDLLAGMSVGQVARRWHYTDPSHFSRSFKRHFGVNPSDL 307 >UniRef50_Q988I6 Transcriptional regulator n=1 Tax=Mesorhizobium loti RepID=Q988I6_RHILO Length = 375 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 56/300 (18%), Positives = 102/300 (34%), Gaps = 10/300 (3%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEV 63 ++F W + + G L L+ V+T+G++ + V Sbjct: 46 PPKDQFAAWRQSFATMLDFVEPGDTEAGFAGTQVIWDLGDLALAQVSTNGLDFTSLAGHV 105 Query: 64 KGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPR 123 + + G++ + AG + + R S+ + L +PR Sbjct: 106 RRDPVDHWLVTLIQDGRSQTITPSKSFDGDAGSVQVHPLGRVFEGSVT-DSEMLLLFVPR 164 Query: 124 TLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN-PALSETESEAALQAMVCLLRP 182 L M L L + P + + L A +L+ Sbjct: 165 DFCRDMSWGLAAAEFSVLRG--GMGPLLADYLASLVQRLPTMGVNDLPGLLSATRAMLQV 222 Query: 183 VLHQRE-----SVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADK 237 + + P ++ + ++ + L E + E G+S LYR+F Sbjct: 223 CIAPSPDHLTEAHDPISATLLERARRFVQHHLFQPDLSIEQMTRELGISRSRLYRLFEAS 282 Query: 238 GLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 G +V YI++RRL A+ D ++ I +GF D + FS F++ FG P E R Sbjct: 283 GGIVH-YIQHRRLLAAHAALADPNDRRRILDIADEYGFGDGAEFSRAFRREFGYCPSEVR 341 >UniRef50_UPI0001907082 AraC family transcriptional regulator n=2 Tax=Rhizobium etli RepID=UPI0001907082 Length = 404 Score = 184 bits (468), Expect = 3e-45, Method: Composition-based stats. Identities = 53/302 (17%), Positives = 99/302 (32%), Gaps = 11/302 (3%) Query: 4 AVDNEFQQWLSQINQVCGNF--TGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQ 61 +FQ W S + + G+ + + + + T + R Sbjct: 53 PPKEQFQSWRSHMAPLVDVHLPDGKSEDDGFLAEQTGWHLGEILIVQQRTQACSYIRDQA 112 Query: 62 EVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLL 121 ++ S + SG+A E + + G G+I P +S+ + L Sbjct: 113 MLRSSPIDHWNVGVLRSGRAWTEANRHVTETGPGEIFFRSLGYPYRGRMTDSAAVLVF-L 171 Query: 122 PRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPA-----LSETESEAALQAM 176 P LL + + L + +L + N + + Sbjct: 172 PYELLTRDASLLQNANNIALSGS--LAELLVSYINGLEANLSNLTVEEVPRIIRTIGDMV 229 Query: 177 VCLLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFAD 236 V + ++ I N+ + L P+ + G+S LY++F Sbjct: 230 VACAASSTSLDRGQEQSNMGLMERAHRYIHLNLHSDSLTPDVMCRALGISRTRLYQLFET 289 Query: 237 KGLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEY 296 G V YIR RRL + + D ++ I GF ++F+ F FG++P E Sbjct: 290 SGG-VFNYIRKRRLLQAYADLTNPTDIRPISEIAEAAGFDVAANFTRAFSHEFGLSPREV 348 Query: 297 RR 298 R+ Sbjct: 349 RK 350 >UniRef50_C9Z9W8 Putative DNA-binding protein n=1 Tax=Streptomyces scabiei 87.22 RepID=C9Z9W8_STRSW Length = 314 Score = 184 bits (468), Expect = 3e-45, Method: Composition-based stats. Identities = 62/297 (20%), Positives = 111/297 (37%), Gaps = 9/297 (3%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLLT-ERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 + W R E + D + L+ V + + R+ Sbjct: 19 PPAERLRAWEEHNADALIALKCRTPGGEDFRAREDNLALGRVHLARVCATAHVVERSADL 78 Query: 63 VKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLP 122 V+ L G+A+ +Q R+ + GD+ + DA + + ++++ + Sbjct: 79 VERRPTGSVAVYVSLRGEALFQQAGRRQVVRPGDVVVCDADGSFVRGFGQGLDELAVRVH 138 Query: 123 RTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRP 182 R L + +P+ P + RL+ S+ A + +A + L+ Sbjct: 139 REALPERAALGEPLIVRS-SEANPYGRALARLVGRSVGGEAAIRPDEQAIVDLASALVSG 197 Query: 183 VLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVA 242 +R V I++ +R+ L +A G+SVR L R+FA+ G Sbjct: 198 GATRRPVV------HRALACARIEEQLRDPRLSAPEVAEAVGISVRQLTRVFAEAGTTFP 251 Query: 243 QYIRNRRLDFCADAIRHAADDEK-LAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRR 298 +Y+ RRL+ + + A + GFS +HFS F RFG+T GE RR Sbjct: 252 RYVLGRRLELAYGVLTGPDAAQSRTASVAAMCGFSSVAHFSQTFHARFGVTAGELRR 308 >UniRef50_B1ZAE8 Transcriptional regulator, AraC family n=1 Tax=Methylobacterium populi BJ001 RepID=B1ZAE8_METPB Length = 335 Score = 184 bits (467), Expect = 4e-45, Method: Composition-based stats. Identities = 68/300 (22%), Positives = 119/300 (39%), Gaps = 10/300 (3%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLLTERY---TGVLDTHFAKGLKLSTVTTSGVNLSRTW 60 + + I + F L + R +D + L + V L RT Sbjct: 11 PPADPAALRENWIAALLPIFQATLPSGRLLSGPIAMDNYHLGDLLVGEVRAPAQILERTP 70 Query: 61 QEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLL 120 + V F SG + +E + + A L D ++P ++ E +LL Sbjct: 71 RMVAQQGLDHLLLQFYHSGTSRVEVAWGETDVTANACILFDLAQPVTV-VAEPVHATNLL 129 Query: 121 LPRTLLEQYFPHQKPICAERLD-ADLPMVQLSHRLLQESMNN-PALSETESEAALQAMVC 178 LPR L+ + P+ + + D A + +L ++E ++ L + QA+ Sbjct: 130 LPRALVAEKVPNVEALHGHAFDYASDRISRLFFTCVRELVDCVDVLEIHQLPHVSQAVAM 189 Query: 179 LLRPVLHQRESVQPRRERQFQ-KVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADK 237 L L + + +P + Q + I+ + L E +A G+S +LYR F + Sbjct: 190 LGSACLRGQAADRPSSDTQLSITIRQYIEKELASPRLDAETLAEHFGLSRATLYRQFVAE 249 Query: 238 GLVVAQYIRNRRLDFCADAIRHAAD--DEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGE 295 G V ++IR RRL + +++ + + GFSD+ FS FK+RFG P E Sbjct: 250 GG-VQRFIRERRLLRAMKMLTQPGPAGRPRVSAVAYATGFSDEKTFSRAFKRRFGFLPRE 308 >UniRef50_Q602N6 Transcriptional regulator, AraC family n=1 Tax=Methylococcus capsulatus RepID=Q602N6_METCA Length = 331 Score = 184 bits (467), Expect = 4e-45, Method: Composition-based stats. Identities = 63/307 (20%), Positives = 117/307 (38%), Gaps = 16/307 (5%) Query: 7 NEFQQWLSQINQ-VCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKG 65 + F+ W + G + + +++ +G++ SRT + V+ Sbjct: 16 DRFEVWREMFCSKMWGLDIAHSDSRPFFARCRFVSLGAVEVIRSELNGLDFSRTPRRVRQ 75 Query: 66 SDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLY-----WQESSKQISLL 120 + F LSG Q ++ LL +P +L + SL Sbjct: 76 QESDDFGFHLSLSGGVRAVQAGCHAEVRGAGGLLLAGGQPYTLSTPQMPGSAHYQCYSLH 135 Query: 121 LPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPAL--SETESEAALQAMVC 178 LPR L Q P + AE P+ L + L + A S A + ++ Sbjct: 136 LPRKELLQRVPDAERHLAEVCAGGEPL-NLLVQYLDLVAGHDAALRSPDLRRLAGEHLLD 194 Query: 179 LLRPVLHQRESVQPR------RERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYR 232 L+ L + + R + +V ++ + R+E L + A G+S L+R Sbjct: 195 LVALTLEPGRDPESQFQRGGLRAARRAALVRYLEQHYRDERLSVKTAAAALGISESYLHR 254 Query: 233 MFADKGLVVAQYIRNRRLDFCADAIRHAADD-EKLAGIGFHWGFSDQSHFSTVFKQRFGM 291 + A+ G + + RL+ + D ++ I F GF+D ++F+ +F++RFG Sbjct: 255 LMAESGESFTEMVNRLRLERAKRMLEDPGCDGLRIGDIAFATGFNDFTYFNRLFRRRFGD 314 Query: 292 TPGEYRR 298 TP +R Sbjct: 315 TPRTFRA 321 >UniRef50_Q1N9N6 Transcriptional regulator, AraC family protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1N9N6_9SPHN Length = 330 Score = 183 bits (466), Expect = 6e-45, Method: Composition-based stats. Identities = 68/300 (22%), Positives = 114/300 (38%), Gaps = 10/300 (3%) Query: 6 DNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKG 65 + + V T Y L + + +S + R V Sbjct: 4 PEALAAFRQSVQDVFT-LTCLGDERLYRLNLSAWHLGTIMVGRFQSSALAFDRDAALVAT 62 Query: 66 SDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTL 125 S + G + V + AGD+ + D ++ IS+L+PR Sbjct: 63 SGLDHLLVQLYVEGGFAGVAADHSVVVTAGDVVIFDLAQGLKTRAT-DFTNISVLIPRPF 121 Query: 126 LEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN-PALSETESEAALQAMVCLLRPVL 184 L + + L A+ + + ++ ++ P L+ +++ A ++ V L+ +L Sbjct: 122 LAHHCDDASRLHGHVLPANGAIAAMLGSYMRALVDRLPTLTPGDAQVAARSTVALVTTML 181 Query: 185 HQR-----ESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGL 239 + P F+KV ID +RE L +A GMS +LYR F G Sbjct: 182 ADQGGGGFAPTAPAPLSPFRKVAQEIDRRLREPSLDAASLAQSLGMSRATLYRTFQPVGG 241 Query: 240 VVAQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRR 298 +A YIR RRL A + A K+ I GF+ +S FS F+ FG+ PG+ R+ Sbjct: 242 -IADYIRRRRLAVAAIILSSPANQRRKIGEIARDCGFASESAFSRAFRSAFGIAPGQARQ 300 >UniRef50_C6WAU0 Transcriptional regulator, AraC family n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6WAU0_ACTMD Length = 305 Score = 182 bits (462), Expect = 1e-44, Method: Composition-based stats. Identities = 64/296 (21%), Positives = 114/296 (38%), Gaps = 8/296 (2%) Query: 10 QQWLSQINQVCGNFTGR-LLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDD 68 + W ++ + R ++G T L + + R ++V D Sbjct: 13 RAWERELASGPLPWAARVADAAGFSGAASTRRVDDLTVVDWESGAFAGVRGPRQVAAGDG 72 Query: 69 AWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQ 128 F SG + Q R+ + AGD ++ P S+L+PR +LE Sbjct: 73 DHFVARIVRSGSEVFAQGGREWVLRAGDAVAWESRSPARFAAAGPVATRSVLIPRDVLED 132 Query: 129 YFPHQKPICAERLDADLPMVQLSHRLLQESM-NNPALSETESEAALQAMVCLLRPVLHQR 187 + +P V+L L+ P L+ + AA A++ L L Sbjct: 133 VGCPL--VIGRPRPGRVPAVRLLAGYLESLAPLLPDLAPGPAVAARNALLELGWGALQPE 190 Query: 188 ESVQPR--RERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYI 245 + P+ + V +D + L + +A G+SVR+L R+F+ G + + Sbjct: 191 SPLDPQALAPARRAAVERYLDARLGRSDLGVDEVAAAHGVSVRTLGRLFSAGGETFSGVL 250 Query: 246 RNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKFR 301 R +R+ + + D +A + WGF D SH + F+ G++P EYR + R Sbjct: 251 RAKRVARVREELL--TGDSTVAALARRWGFFDTSHLNRRFRAVHGVSPHEYRARHR 304 >UniRef50_B1T3D6 Transcriptional regulator, AraC family n=1 Tax=Burkholderia ambifaria MEX-5 RepID=B1T3D6_9BURK Length = 350 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 69/302 (22%), Positives = 126/302 (41%), Gaps = 11/302 (3%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLLTERY-TGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 A++ + + W S + + + G L + L + ++T + R + Sbjct: 23 ALERKSEVWRSITELLFDGAPATDTQDAHLEGELFSRLVGSLLVVSMTCNAQRHRRDCRL 82 Query: 63 VKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLP 122 + S + SG E R + G GDI L D +R + + S IS+++ Sbjct: 83 IATSGLDHYVIRLFTSGMRDGECAGRPITSGPGDIGLFDLARTSEISTRGGSS-ISVIMA 141 Query: 123 RTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMN-NPALSETESEAALQAMVCLLR 181 R+ +++ + + L A P+ L L + L+ E+EA AM+ LL Sbjct: 142 RSRIDKAMGG-RCLHGVVLRAGRPLTTLMADYLLSLVKVTGELTGIEAEAIESAMIALLA 200 Query: 182 PVLHQRESVQPRR----ERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADK 237 L++ + +K++ ID N+ L + + + +S LYR+F + Sbjct: 201 AGLNEENAEGAGAFSGPVFLRRKIIEFIDANLTNSDLGLDLLIRQFRVSRARLYRIFDLE 260 Query: 238 GLVVAQYIRNRRLDFCADAIRHAADD--EKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGE 295 G VA+ IR +RLD + + + + + + FSD S F F++RFG+TP E Sbjct: 261 GG-VAKIIREKRLDAAYQVLARPTEKELRSITEVAYMFCFSDGSQFLRAFRRRFGVTPRE 319 Query: 296 YR 297 R Sbjct: 320 AR 321 >UniRef50_Q89RN6 Transcriptional regulatory protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89RN6_BRAJA Length = 336 Score = 181 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 70/299 (23%), Positives = 116/299 (38%), Gaps = 8/299 (2%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEV 63 V ++ + + + + + + + GL ++ + V +R+ Sbjct: 15 PVAERLDRYRAILTHYDVSVPAGTDRDDFEVLAEAWLLGGLVAASTRMAPVRFTRSAALA 74 Query: 64 KGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPR 123 K F + G E D + G G + +LD +RP ++ ISL + R Sbjct: 75 KADGRNSFALLLLRRGAWSGEVDGEPISAGPGQVLVLDLTRPFD-GIATATDTISLDVER 133 Query: 124 TLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPV 183 + P + LD V L+ + PA+ E ++ A++ + LLR Sbjct: 134 DPIVSAAPDGLDLHGLVLDGAAGRV-LADHMALLRRRLPAMEENDALDAVRTTLDLLRGC 192 Query: 184 LH-----QRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKG 238 + + + R + ID N+ L I E G+S LYR+FA Sbjct: 193 FGVAARPREQGLARRDIAILHRASRFIDQNLGRNDLSVATICREIGVSRSVLYRVFAPLA 252 Query: 239 LVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 VA YIR RRL+ + A +D A I +GF Q+HFS F+Q FG +P R Sbjct: 253 G-VADYIRGRRLEAIHVLLDDADEDRWNAEIAAAFGFVSQAHFSRSFRQHFGYSPRIAR 310 >UniRef50_Q1YEQ1 Putative transcriptional regulator n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YEQ1_MOBAS Length = 349 Score = 181 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 66/297 (22%), Positives = 119/297 (40%), Gaps = 7/297 (2%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEV 63 A+ + F+ + G L + + L + + V R+ Q + Sbjct: 24 ALKDRFEAYRDLYA---GGTEVIRLGAGFAAQFEARPLGELVIFERWLNNVAHERSAQRI 80 Query: 64 KGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPR 123 + F LSG ++E + + G+I +LD RP ++ ++ + R Sbjct: 81 RQDGFEHFVMQLNLSGVLVVETADGATTVKPGEIIILDTGRPYGNRC-GNAHVLTFSVAR 139 Query: 124 TLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPV 183 ++E+ + + + L A+ + L+ + + N L + LL Sbjct: 140 YVVERAYLGGQDLHGRILGAERGAL-LADFMASLTRNARTLPADAVNGMVGIFSELLMIT 198 Query: 184 LHQRESVQPRRER-QFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVA 242 L Q + R + + LI++ + L P IA + G+S LY MF G VA Sbjct: 199 LRQDDGTASAEARGKLKLAQELIEEGLSRHDLDPAVIAAKAGISRSRLYEMFKTHGG-VA 257 Query: 243 QYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRK 299 YIR RR+ + D +A + F GF+ +SH S F++ F M PG++RR+ Sbjct: 258 SYIRRRRVHRFRALLSQRRDMRSIAELAFACGFASESHASRTFREVFAMPPGQFRRR 314 >UniRef50_B7KY13 Transcriptional regulator, AraC family n=4 Tax=Methylobacterium extorquens group RepID=B7KY13_METC4 Length = 331 Score = 181 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 63/296 (21%), Positives = 108/296 (36%), Gaps = 8/296 (2%) Query: 6 DNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKG 65 + W+ I+ + +T ++ H + + + RT ++ Sbjct: 14 RARRRAWIDAISPIFHATVDEAVTVPPHVLMKNHNLQRCLFGVLRAPRQRIERTPSQISL 73 Query: 66 SDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTL 125 L G A ++ + GD T+ D S+ I+LL+PR Sbjct: 74 QAVDHLLIRIYLDGTACVDAGGGDRAVKPGDFTIFDLSQVMRSD-TGEIASINLLMPRRS 132 Query: 126 LEQYFPHQKPICAERLDAD-LPMVQLSHRLLQESMNN-PALSETESEAALQAMVCLLRPV 183 L++ P+ D P+ QL L+ A + ++ A V L + Sbjct: 133 LDRRLGDLSPLHGRVFRQDLTPLTQLMGDHLRSLATCVEAADAWQRDSLSIATVALCNAM 192 Query: 184 LHQRESVQPRRERQFQ--KVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVV 241 L P + ID ++ L + + G+S +LY +F G V Sbjct: 193 LTPEGGDTPYTPDTMLGIAIRQFIDGDLTAYDLDADKLTARFGISRTNLYALFEPDGG-V 251 Query: 242 AQYIRNRRLDFCADAIR--HAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGE 295 A YIRNRRL + +++A IG+ GF + FS FK+R+G+ P E Sbjct: 252 ASYIRNRRLARAMRILAGIERGPRQRIASIGYACGFETEKSFSRAFKRRYGVNPSE 307 >UniRef50_B1FSR0 Transcriptional regulator, AraC family n=1 Tax=Burkholderia graminis C4D1M RepID=B1FSR0_9BURK Length = 347 Score = 181 bits (460), Expect = 3e-44, Method: Composition-based stats. Identities = 66/309 (21%), Positives = 116/309 (37%), Gaps = 18/309 (5%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVN------LS 57 + F+ W ++N + + ++ + L T + L + T +G + Sbjct: 14 PNEQRFEVWRDEVNAIFDVDIEKSVSSSFNYDLSTGYIGSLLMGCGTWAGQQEPVAYGVK 73 Query: 58 RTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQI 117 R+ Q ++ FY ++ ++ I +LD +R + Sbjct: 74 RSAQMIRRDGLDHFYLCLGITHSLSGYAARTPIEAEPSKIYVLDLARELDSEIVAG-DTV 132 Query: 118 SLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN-PALSETESEAALQAM 176 L + R LLE + L PM L + P LS + QA Sbjct: 133 ILTIARDLLEPRIRSA-NLHGAVLQG--PMSALLGDHMISLRRQLPYLSPADMPYIEQAT 189 Query: 177 VCLLRPVLHQRESVQPRRE-----RQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLY 231 + ++ L E +V ID N+ L P+ I + G+S LY Sbjct: 190 LAMVSAALAPSAQTLADAENEINHALLVRVRRYIDANLTAAQLSPQQICRDVGISRAHLY 249 Query: 232 RMFADKGLVVAQYIRNRRLDFCADAIRHAADD-EKLAGIGFHWGFSDQSHFSTVFKQRFG 290 R+FA + VA YI+ RRL + + ++L+ + F + F +SHFS F+Q FG Sbjct: 250 RLFARESG-VAAYIQQRRLAKIREILESPKGRKQRLSTLAFQYSFKSESHFSRSFRQAFG 308 Query: 291 MTPGEYRRK 299 +P + R + Sbjct: 309 CSPSDARER 317 >UniRef50_Q89NH4 Transcriptional regulatory protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89NH4_BRAJA Length = 355 Score = 181 bits (460), Expect = 3e-44, Method: Composition-based stats. Identities = 55/303 (18%), Positives = 103/303 (33%), Gaps = 10/303 (3%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLLTE-RYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 D + + +H +L G + RT Sbjct: 49 PEDERVPLLREFYCRGVLKAEVEVREGKPAAASFTSHVLPEAQLLIGGLCGARVVRTKHL 108 Query: 63 VKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLP 122 V D + SG + + +++ AG+ L A SL +P Sbjct: 109 VA-DGDDSLALIVNRSGVLGISERGHDLRLRAGEAVLTSAEDVTIFERLSLGSGFSLRVP 167 Query: 123 RTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN-----PALSETESEAALQAMV 177 R +L + ++L ++ PA+ + + Sbjct: 168 RRVLAPMIVDVDDAVMRVIPESTTGLRLLVDYAIALVHEKVLAVPAMRQLGVAHLHDLLA 227 Query: 178 CLLRPVLHQRESVQPR--RERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFA 235 +L H RES R + + QK LI +N ++ + +A E G++ R L R+F Sbjct: 228 LVLGATDHARESTGRRGIKAARLQKAKFLIVNNCWQQDISVANVAQELGVTPRYLQRLFE 287 Query: 236 DKGLVVAQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPG 294 G + ++ +RL +R + ++ I + GF D S+F+ F++ +G TP Sbjct: 288 ADGKTFSSFLTEQRLKRAHRMLREPDFAERPVSSIAYDVGFGDLSYFNRCFRRAYGATPS 347 Query: 295 EYR 297 + R Sbjct: 348 DVR 350 >UniRef50_A5VEH1 Transcriptional regulator, AraC family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5VEH1_SPHWW Length = 307 Score = 181 bits (459), Expect = 4e-44, Method: Composition-based stats. Identities = 62/305 (20%), Positives = 128/305 (41%), Gaps = 12/305 (3%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLLTE--RYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQ 61 ++ + S + G + + R G+L + V + V R Sbjct: 5 PASSDANHFASSLRAAYGVYDTEPTSSAIRSAGMLTPVSRGPFEGYLVHANAVRSKRPA- 63 Query: 62 EVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLL 121 ++ + + + L+G ++ +RQ + AGD+ L+D+ P ++ ++ + L + Sbjct: 64 -LRDRWEDCAFILMPLAGDIHVDHYDRQNVLSAGDMVLMDSHAPSTIDAFGRNRSVVLAM 122 Query: 122 PRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVC--- 178 PR+ + Q P + RL + + +L ++ A E ++ ++ + Sbjct: 123 PRSTVSQLRPDSDRLFGRRLQGRKGIGNMLSAMLASIVDADAEEEMDARDSMLTLSVTMS 182 Query: 179 ----LLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMF 234 L+ + R E + K+ + + +N + + E +A +S RSLYR+F Sbjct: 183 LLDRLIENRPDSDSHRRSRAEAEIGKMRSWVVENAADPDMSIETLARRFALSRRSLYRLF 242 Query: 235 ADKGLVVAQYIRNRRLDFCADAIRHAADD-EKLAGIGFHWGFSDQSHFSTVFKQRFGMTP 293 + G Q++ + RLD + ++ + F GF+D SHF+ +FK+RFG+ P Sbjct: 243 GEVGATPRQWLADVRLDEARKWLVAGDPRFRTVSQVAFAAGFNDSSHFTRLFKRRFGVLP 302 Query: 294 GEYRR 298 G R Sbjct: 303 GSLAR 307 >UniRef50_B2SBA0 Helix-turn-helix, AraC type n=40 Tax=Rhizobiales RepID=B2SBA0_BRUA1 Length = 440 Score = 181 bits (459), Expect = 4e-44, Method: Composition-based stats. Identities = 60/304 (19%), Positives = 108/304 (35%), Gaps = 12/304 (3%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRL--LTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQ 61 D +F W + ++ + + ++ G+ + TS + R+ Sbjct: 77 PTDQQFAAWQAHMSVLLTTHLPESAQPDDGFSVTQHVWNLDGILIVQQDTSAFHFERSAN 136 Query: 62 EVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLL 121 EV+ S + SGQ+ + + V+ G + + +P S +S SL++ Sbjct: 137 EVRFSPIDHWMITIMRSGQSWTGMNGQVVENHPGLVEIRSLGQPFSGRTLAASST-SLII 195 Query: 122 PRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQES-MNNPALSETESEAALQAMVCLL 180 P L QL L + L++ + + L+ Sbjct: 196 PADAFADRGGLPITCNNVALGGHR--AQLLIGYLTSVEASLGKLAQGDLAGVKANLRELV 253 Query: 181 RPVLHQ-----RESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFA 235 + E + K I +N+ L P+ + E +S LY +F Sbjct: 254 FDAIAPLVEHIDEKDNVSQIALMTKARRFIQNNLASPDLTPDALGRELALSRTRLYELFE 313 Query: 236 DKGLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGE 295 G VA YIR RR+ + AD K+A +G GF ++FS F +FG +P Sbjct: 314 TFGG-VANYIRRRRMLAAHAMLADPADTRKVAEVGEVIGFDSAANFSRAFTHQFGYSPSN 372 Query: 296 YRRK 299 R++ Sbjct: 373 IRKQ 376 >UniRef50_A6X7A5 Helix-turn-helix-domain containing protein AraC type n=1 Tax=Ochrobactrum anthropi ATCC 49188 RepID=A6X7A5_OCHA4 Length = 386 Score = 180 bits (458), Expect = 4e-44, Method: Composition-based stats. Identities = 53/308 (17%), Positives = 104/308 (33%), Gaps = 16/308 (5%) Query: 5 VDNEFQQWLSQINQVCGNF--TGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 +F W + + G + + +G+ L T + RT ++ Sbjct: 52 PRAQFPTWQQHVAPLYDVRMPDGVNAEDGFAVTQKVWDLRGMLLIEQTVPPFSYERTAEK 111 Query: 63 VKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLP 122 V+ S + F SG+ D+R + G I + P + + L++P Sbjct: 112 VRFSPIDHWQISFLRSGRTWTAVDDRVAENEPGMINIRSFGYPFRGRALAT-DVVLLIIP 170 Query: 123 RTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN---------PALSETESEAAL 173 + L +L + P L + + Sbjct: 171 VDHFAGLGGMPEACNNATLGGYR--AKLLIDFVSTIQAGLDHIRSEDLPELRDALRQIVF 228 Query: 174 QAMVCLLRPVLHQRESVQ-PRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYR 232 + L++ + K I N+ L P+ ++ E +S LY+ Sbjct: 229 DTIAPLVKENDASEHNASLGASLGLMTKARRFIQKNLTSRELTPDALSKELAISRTHLYQ 288 Query: 233 MFADKGLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMT 292 +F G V YIR +RL + + A+++ +++ I +GF ++F+ F Q FG + Sbjct: 289 LFEGSGG-VLNYIRQKRLLAAHEMLADASENRRVSDIAQLFGFDTAANFTRAFTQHFGYS 347 Query: 293 PGEYRRKF 300 P R+ Sbjct: 348 PSNVRKSL 355 >UniRef50_UPI00016A440E helix-turn-helix- domain containing protein AraC type n=1 Tax=Burkholderia ubonensis Bu RepID=UPI00016A440E Length = 347 Score = 180 bits (458), Expect = 4e-44, Method: Composition-based stats. Identities = 65/308 (21%), Positives = 123/308 (39%), Gaps = 13/308 (4%) Query: 1 MNPAVDNEFQQWLSQINQVCGNFTGRLLTE-RYTGVLDTHFAKGLKLSTVTTSGVNLSRT 59 + PA+ + + W + + R G L + L +S + + R Sbjct: 13 VEPALRD--EYWRQVTRPIVDTTPIAGHGDARLAGTLASRMLGELLMSRTSFNAQQYRRD 70 Query: 60 WQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISL 119 + ++ S + SG + + + +V+ GDI ++D +P + +++ Sbjct: 71 RRTIQQSGFDQYVVQLVRSGSLVGDFNGVEVRACPGDIYIIDLGQPMCSRVDAG-ESVAV 129 Query: 120 LLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMN-NPALSETESEAALQAMVC 178 +PR LE+ + + L A+ + +L L S ++ A AMV Sbjct: 130 FVPREGLEKASGG-RDLHGVVLHANRAITRLLADYLVGMYELGEQASPAQAIAVQDAMVA 188 Query: 179 LLRPVLHQRESVQPRRE-----RQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRM 233 L L + + RR +++V I ++ + L P+ + +S LYR+ Sbjct: 189 LFAAALAEAAAPAGRRPVTHGAALRRRIVQHISQHVTDRDLSPDTLMTHFRISRAHLYRV 248 Query: 234 FADKGLVVAQYIRNRRLDFCADAIRHAADD-EKLAGIGFHWGFSDQSHFSTVFKQRFGMT 292 F G VA++IR+RRLD A+ + + + + F +GFS +QRFG T Sbjct: 249 FEADGG-VARFIRDRRLDLAYRALVDPRSNGQTIKEVAFRYGFSSSDMLVRAMRQRFGAT 307 Query: 293 PGEYRRKF 300 E R + Sbjct: 308 AREIRTEH 315 >UniRef50_UPI0001B58744 AraC family transcription regulator n=1 Tax=Streptomyces sp. C RepID=UPI0001B58744 Length = 329 Score = 180 bits (458), Expect = 5e-44, Method: Composition-based stats. Identities = 63/306 (20%), Positives = 113/306 (36%), Gaps = 12/306 (3%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLLTER-YTGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 + F + ++ + G ++ S + S + RT Sbjct: 7 PKGDRFDWYSDIVSSEVMPARLSCERPAEFQGEAAVLDLGEIRASRFSLSPLRSRRTAPM 66 Query: 63 VKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCS---LYWQESSKQISL 119 ++ D + G + Q + IGAGD+ L D SRP L + L Sbjct: 67 IRRGDPEEYQLALLRKGATSLSQYRSECTIGAGDLMLWDTSRPSDNQMLTAGGQVQATIL 126 Query: 120 LLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN-----PALSETESEAALQ 174 +LPR ++ + A R+ + M + + ++ P S A+ Sbjct: 127 MLPRNIMPLRTQRLDQVLARRIPG-MGMAAILASFMTSLEDHGAECTPEELRRLSTVAVD 185 Query: 175 AMVCLLRPVLHQRESVQP--RRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYR 232 L L + + R + Q++ I+ N+ + L P +A +SVR+L++ Sbjct: 186 LAAACLAQQLDAEDQLPAEVRAQALVQRIHAFIEHNLGDPELNPSAVAARHHISVRTLHQ 245 Query: 233 MFADKGLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMT 292 +F + A+ R R AD A ++ I WGFS FS F++ +G+T Sbjct: 246 LFHGQESTNARIRRRRLERCRADLADPALAGRRVGAIAARWGFSGPVVFSRSFREAYGVT 305 Query: 293 PGEYRR 298 P E+R Sbjct: 306 PTEFRA 311 >UniRef50_C9YUR8 Putative transcriptional regulator n=1 Tax=Streptomyces scabiei 87.22 RepID=C9YUR8_STRSW Length = 299 Score = 180 bits (457), Expect = 5e-44, Method: Composition-based stats. Identities = 59/214 (27%), Positives = 95/214 (44%), Gaps = 6/214 (2%) Query: 90 VQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQ 149 V + GDI DA P S + L+ R L + + A + + Sbjct: 76 VHLRPGDICFYDAGHPPSPDLPAHCRLKVFLVSREELGLEDGDLRRVVAAPVARTSRLGT 135 Query: 150 LSHRLLQESMNNPALSETESEAALQAMVCLLRPVLHQRES-----VQPRRERQFQKVVTL 204 L L E + + +E + V LL + +R R +VV Sbjct: 136 LLSPFLSELADTVSADPPVAEMLARNAVNLLATLATERSGQDEAQTPGVRSPMVARVVRF 195 Query: 205 IDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHA-ADD 263 ID+++ + L PE IAG +SVR L+++F D+G V ++I+ RRL+ C + H + Sbjct: 196 IDEHLSDADLSPEVIAGAHHISVRYLHKLFRDEGTTVGRWIQRRRLEECRRDLVHGLRNR 255 Query: 264 EKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 +A + WGF +HFS VF+ +GM+P E+R Sbjct: 256 RTIASVAGRWGFLSATHFSRVFRAAYGMSPSEWR 289 >UniRef50_D2UCS7 Hypothetical hth arac/xyls-type dna-binding domain transcription regulator protein n=1 Tax=Xanthomonas albilineans RepID=D2UCS7_XANAL Length = 330 Score = 180 bits (457), Expect = 6e-44, Method: Composition-based stats. Identities = 73/309 (23%), Positives = 125/309 (40%), Gaps = 19/309 (6%) Query: 5 VDNEFQQWLSQINQVCGNFTGRLLTER----------YTGVLDTHFAKGLKLSTVTTSGV 54 +WL + + G + R + G ++ + L+ V +G Sbjct: 23 PGERVPRWLDWMARSIGVDRPGVRARRKFSFSPLQPVFDGCINQLRLGNVHLAKVLATGH 82 Query: 55 NLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESS 114 T + + Q G + M D + AG++ +L +R Q + Sbjct: 83 EFHLTLAD-NDEERPRILVALQHKGASRMVCDGVSTALRAGELAVLQVNRQFCFASQANV 141 Query: 115 KQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEA-AL 173 + + + +RL PM +L+ L++ + P L ++SE Sbjct: 142 ENYFVWF--AQPRHAMKLVDEVALQRLCGPAPMQRLACSLIERLFSEPGLCNSDSEQFLA 199 Query: 174 QAMVCLLRPVLHQRESVQPR---RERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSL 230 QA+ LL + VQP+ + VV ++ N+R+ L PE IA G S R++ Sbjct: 200 QALTKLLELTFKESSDVQPQLEPNRPSREMVVQFVERNLRDPELSPESIARALGWSKRTV 259 Query: 231 YRMFA-DKGLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRF 289 YR F G + Y+ RR++ CA +R ++ + GI + +GFS HFS +FKQ Sbjct: 260 YRAFKGSDGESLNSYLWRRRVEQCAQELRGPG-NQSITGIAYSFGFSSSPHFSRLFKQHM 318 Query: 290 GMTPGEYRR 298 G +P YRR Sbjct: 319 GASPLRYRR 327 >UniRef50_A5V7R9 Transcriptional regulator, AraC family n=2 Tax=Sphingomonas wittichii RW1 RepID=A5V7R9_SPHWW Length = 367 Score = 180 bits (457), Expect = 6e-44, Method: Composition-based stats. Identities = 61/271 (22%), Positives = 107/271 (39%), Gaps = 12/271 (4%) Query: 42 KGLKLSTVTTSGVNL--SRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITL 99 + +S + GV RT +EV+ + F + G + Q+ R I G L Sbjct: 54 GYIPISRHRSIGVRTVTRRTLKEVRSNTSDTFLIWLPIRGAVTITQNGRTATIEPGSFAL 113 Query: 100 LDASRPCSLYWQESSKQISLLL----PRTLLEQYFPHQKPICAERLDADLPMVQLSHRL- 154 + P + + Q L P L+ Q P K +CA L +++ L Sbjct: 114 SYGNEPLCIATLSDADQEHLSYQITAPAHLVSQAIPEPKRLCAIPFSTTLGGARIARELF 173 Query: 155 LQESMNNPALSETESEAALQAMVCLLRPVLHQRESVQPR----RERQFQKVVTLIDDNIR 210 L L +EA + + L ++Q R RE + Q+++ ++ N Sbjct: 174 LSLYEEADNLDRASAEALALSGLHALFRTVNQEGVEHGRSLSVREVKLQRLMDYLELNYS 233 Query: 211 EEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAA-DDEKLAGI 269 + L E +A + G+S R L+ + KG Y+ RL+ + A ++ I Sbjct: 234 DSELTTEKVAKDCGISTRYLHYLLKSKGTRFYDYLWQARLNNAYQQLTDPALARRTISEI 293 Query: 270 GFHWGFSDQSHFSTVFKQRFGMTPGEYRRKF 300 + GF +HFS F+ +F +P E R++ Sbjct: 294 AYAIGFKSSAHFSRAFRNQFARSPREVRQEM 324 >UniRef50_C3JDH7 Transcriptional regulator, AraC family n=1 Tax=Rhodococcus erythropolis SK121 RepID=C3JDH7_RHOER Length = 315 Score = 179 bits (456), Expect = 9e-44, Method: Composition-based stats. Identities = 57/299 (19%), Positives = 103/299 (34%), Gaps = 3/299 (1%) Query: 3 PAVDNEFQQWLSQINQVCGNFTGRLL-TERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQ 61 P++ QQW ++++ G G + + ++ S L R+ + Sbjct: 9 PSLPESVQQWHCEMSETFGGLCPESSVDAAPVGTVSGVSLGDVGAFDISGSPQILRRSAR 68 Query: 62 EVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLL 121 K +G AI+ Q +R++ G + L D +L + + L Sbjct: 69 AAKRHGSDLLKICTVRTGSAILRQSDRELTAPPGAMILYDVEHSYALRFDGHWSCTVMTL 128 Query: 122 PRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLR 181 PR+ + D L + ++ + + + + A V L Sbjct: 129 PRSAVSLTERELNCALERTHDGRRGSGALLENFISGAVAS-QVDGSAAGLLGDAGVNLAS 187 Query: 182 PVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVV 241 VL Q + ++++ N+ L IAG +S R++ R F D L + Sbjct: 188 AVLMQGSAPATPGRSTREEILRYALRNLDSPDLSVASIAGALHLSPRTVQRHFGDGDLTL 247 Query: 242 AQYIRNRRLDFCADAIRH-AADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRK 299 + IR RL + + ++ + W F D FS FK FG P E R Sbjct: 248 SALIRRERLIRVRRDLTDVSLRGHSISILAARWCFHDAPAFSRAFKAEFGAAPSEVRNS 306 >UniRef50_Q216W5 Transcriptional regulator, AraC family n=2 Tax=Bradyrhizobiaceae RepID=Q216W5_RHOPB Length = 375 Score = 179 bits (455), Expect = 9e-44, Method: Composition-based stats. Identities = 53/299 (17%), Positives = 105/299 (35%), Gaps = 7/299 (2%) Query: 8 EFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSD 67 F++W + + + + L + RT ++ Sbjct: 61 RFEKWQQLTSSLFVASKKSPMVGSRDLSFRCYNLDRLLFFDHSAGAYGAERTPSQIVTQG 120 Query: 68 DAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLE 127 Q G ++ + + G GD+ +LD S+ E I + LPR E Sbjct: 121 VDHILLGLQTVGTTLLMRSDGVAMAGVGDLVVLDLSQRFQF-ATEGMSAIHICLPRRRFE 179 Query: 128 QYFPHQKPICAERLDAD-LPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPVLHQ 186 + + L ++ P+++L L + E L + + Sbjct: 180 NHARKMGARHMQILRSEGEPLLKLMADHLLNMRTCLHHAVAEQLHLLTSAAIAICNAAFT 239 Query: 187 RESVQPRRERQFQKV--VTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQY 244 E + I++NI+ + L E + G+S LY++F G +V+ Y Sbjct: 240 PPEDSSYNEPAVAAIEVRQFIEENIQHQDLGIELLCARFGLSRTPLYKLFEVDGGIVS-Y 298 Query: 245 IRNRRLDFCADAIR--HAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKFR 301 IR+RRL + ++++ + + G+ FS F +R+G+ P E R ++ Sbjct: 299 IRSRRLARAMLMLSGVEGRSHQRVSSVAYACGYQSAKMFSRAFHRRYGVNPREVNRTYQ 357 >UniRef50_Q6W2D2 Transcriptional regulator n=11 Tax=Rhizobiales RepID=Q6W2D2_RHISN Length = 385 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 54/301 (17%), Positives = 98/301 (32%), Gaps = 11/301 (3%) Query: 5 VDNEFQQWLSQINQVCGNFTGR--LLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 +FQ W + + + E + L + +G + R Sbjct: 58 PAEQFQAWRTHMAPLAEVRLPDNLPPEEGFVAEQTAWHCGNLLIVQQRVAGHSYLRPQTM 117 Query: 63 VKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLP 122 ++ S + SG E D R + G + P ++ + L +P Sbjct: 118 LRASPIDHWCVELLHSGTTWTEADRRVTENAPGRLVFRSLGYPFRGR-TTAADGVLLFMP 176 Query: 123 RTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESM-NNPALSETESEAALQAMVCLLR 181 L L + + L ++ L+ E + + ++ Sbjct: 177 YELFADDAAVLGEANNLVLSGN--LADLLITFIEGIEPRLDRLTAEEIPRIVHTVHDMVV 234 Query: 182 PVLHQRESVQPRRER----QFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADK 237 + + ++ I N+ L P+ IA G+S LY++F Sbjct: 235 ACVASSARPDAAGAQTNKGMMERAHRHIHLNLHSAELTPDAIARAIGISRTRLYQLFEAS 294 Query: 238 GLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 G V YIR RRL A+ +D +A I GF ++F+ F FG++P E R Sbjct: 295 GG-VLNYIRRRRLQQAHAALSDPSDGRPIAEIAEAAGFDVAANFTRAFSHEFGVSPREIR 353 Query: 298 R 298 + Sbjct: 354 K 354 >UniRef50_Q89T46 Transcriptional regulatory protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89T46_BRAJA Length = 319 Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats. Identities = 53/298 (17%), Positives = 104/298 (34%), Gaps = 8/298 (2%) Query: 8 EFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSD 67 F+QW + CG G + L + L+ + +RT + Sbjct: 22 AFEQWRDRAFGACGLDIGPSHGDSIDCRLQISVVDNIALAIPEGASAQYTRTQSHLA-DG 80 Query: 68 DAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLE 127 + +G + Q+ V++ + L+D ++ + + ++ +PR L Sbjct: 81 SDDLVLIAAHAGLVRVGQNGHTVELAPAQMVLVDMGITGTVGHTDEDRFTTIRMPRRALL 140 Query: 128 QYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPVLHQR 187 P + ++ L + + + P L Q MV L+ +L Sbjct: 141 DINPRAEEKLSQVLADGAVAETIFRYHALAANHGPHLDAVGQRLTAQHMVDLVGLLLGTD 200 Query: 188 ESVQP------RRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVV 241 + + + + + L +A +G+S R R+F G Sbjct: 201 AEHASLMRGRGQAAARLDLMRADVMAALGRNDLCLAEVATRSGLSPRQAQRLFEQAGTTF 260 Query: 242 AQYIRNRRLDFCADAIRHAADD-EKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRR 298 +++ +RL + K++ I GFSD S+F+ F++RFG TP E R Sbjct: 261 TEFVLEQRLLLARKLLGDPRARTRKISDIAHSSGFSDLSYFNRAFRKRFGATPSELRE 318 >UniRef50_Q38ZZ8 Transcriptional regulator, AraC family n=1 Tax=Burkholderia sp. 383 RepID=Q38ZZ8_BURS3 Length = 344 Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats. Identities = 69/310 (22%), Positives = 118/310 (38%), Gaps = 24/310 (7%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTS---------GV 54 + F W +Q + T + + + + T Sbjct: 17 SPAERFNAWQTQYSISEFALTA-PIDPIIDYQFIGYTLGNISIGKWTYHHPGNAAVPLSY 75 Query: 55 NLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESS 114 L+R+ ++ + + +G E D R V + GDI ++D +RP Q Sbjct: 76 TLNRSAAFIRRDGVDNYSFNLRDAGSVHGEIDGRPVFVQPGDILVVDQARPYHREIQAG- 134 Query: 115 KQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN-PALSETESEAAL 173 I+LL+ R +L + + QL L+ ++ LS++E+ Sbjct: 135 DAITLLVARDMLPNLPSSVHGTLF-----NGGISQLLDSFLRSLLDKIGTLSQSEALHVE 189 Query: 174 QAMVCLLRPVLHQ-RESVQPRRERQFQ----KVVTLIDDNIREEILRPEWIAGETGMSVR 228 QA + L++ +L + + R K+ I N+ L P+ I E G+S Sbjct: 190 QATLSLVKAMLSPTAQEISNARSELLSTLYVKIKAYIRQNLESPDLSPDRICKEIGISRS 249 Query: 229 SLYRMFADKGLVVAQYIRNRRLDFCADAIRHA-ADDEKLAGIGFHWGFSDQSHFSTVFKQ 287 SLYR+F G VA YIR RRL A+ + ++ + + +GF+ + S FK Sbjct: 250 SLYRLFEQDGG-VANYIRKRRLLAIHRALMSPESPRHRIGDLAYRYGFNSNTQLSRAFKL 308 Query: 288 RFGMTPGEYR 297 FG P E R Sbjct: 309 EFGHAPSETR 318 >UniRef50_A0KD53 Transcriptional regulator, AraC family n=9 Tax=Burkholderia cepacia complex RepID=A0KD53_BURCH Length = 350 Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats. Identities = 63/304 (20%), Positives = 110/304 (36%), Gaps = 21/304 (6%) Query: 4 AVDNEFQQW-LSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLS----TVTTSGVNLSR 58 + F W + L LS + R Sbjct: 18 PEPDRFHVWVKDMLCDY--RLDDDGGHGPCDAEATGAALGPLILSGRHWHSRAPTYTVRR 75 Query: 59 TWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQIS 118 T + ++ L G+ ++ GAGD+ + D ++ + IS Sbjct: 76 TPRRIRLDGQDSIRFTLLLGGRLASHTGGPELIKGAGDLFVYDVAQINDCKVEAG-DVIS 134 Query: 119 LLLPRTLLEQYFPHQKPICAERLDADLPMVQLSH-RLLQESMNNPALSETESEAALQAMV 177 L++PR LL + + +L ++L N P L + + +Q+M+ Sbjct: 135 LVVPRYLLPAHAAQAHGQT-----LTSGVGRLVADQMLSLFRNLPNLRMQDVPSIVQSML 189 Query: 178 CLLRPVLHQR-----ESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYR 232 LL + ++ P +V ID ++ E L PE I + G+S LY+ Sbjct: 190 LLLAAAVSPSAQALNDARGPIDHALVDRVRRYIDLHLLEPDLTPERICRDIGVSRARLYQ 249 Query: 233 MFADKGLVVAQYIRNRRLDFCADAIRHA-ADDEKLAGIGFHWGFSDQSHFSTVFKQRFGM 291 +F ++G V + I RRL + +++A I + GF D+ +F +FK FG Sbjct: 250 LFKEEGG-VMRQITRRRLRHAYHVLGDPQRRHQRIAEIAWAHGFPDEKYFHRLFKAEFGH 308 Query: 292 TPGE 295 TP E Sbjct: 309 TPKE 312 >UniRef50_B2SCD0 Helix-turn-helix, AraC type n=39 Tax=Rhizobiales RepID=B2SCD0_BRUA1 Length = 351 Score = 178 bits (453), Expect = 2e-43, Method: Composition-based stats. Identities = 77/302 (25%), Positives = 133/302 (44%), Gaps = 14/302 (4%) Query: 9 FQQWLSQINQVCGNFTGRL--LTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGS 66 + QW S + VCGNF + + G G++ + V+ +SR W +++ Sbjct: 48 YDQWSSDLRSVCGNFNPQTVERGDDVVGAARRIDVCGMEFAHVSNDLDCISRGWDDIRRD 107 Query: 67 DDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSK-QISLLLPRTL 125 + + QL G +E +RQ + G+ L+D++RP + Y+ +SL LPR L Sbjct: 108 AQEHLFLIVQLEGSCGLEHGDRQNILDVGECILVDSTRPTTFYFGGRFSNHLSLHLPRQL 167 Query: 126 LEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPVLH 185 + I A +L A PM + H L+ + M S++ S+ Q M R H Sbjct: 168 MYSDSRIPFDI-ARKLSAHDPMAHMLHALIAKIMATTE-SDSASQHLRQLMFNATRQAFH 225 Query: 186 QRESVQPRR------ERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGL 239 P ++ Q V LID ++ E L W+A G+S+R+L + F G+ Sbjct: 226 STGESAPLHSLHDSASKRLQIVDLLIDRHLTETELSARWLATRLGISIRTLQQDFQGMGV 285 Query: 240 VVAQYIRNRRLDFCA---DAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEY 296 IR++RL + ++ +A + + GF+D S+F+ FK+ F P + Sbjct: 286 TCTMVIRDKRLRLAKEKIEQLKEQKSGGTIAEVAYSAGFNDISYFNRSFKELFDCAPTDL 345 Query: 297 RR 298 + Sbjct: 346 LK 347 >UniRef50_C4WP97 Helix-turn-helix domain-containing protein n=1 Tax=Ochrobactrum intermedium LMG 3301 RepID=C4WP97_9RHIZ Length = 401 Score = 178 bits (453), Expect = 2e-43, Method: Composition-based stats. Identities = 53/299 (17%), Positives = 104/299 (34%), Gaps = 8/299 (2%) Query: 6 DNEFQQWLSQINQVCGNFTGR--LLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEV 63 +F W + + + + +G+ L + RT ++V Sbjct: 72 SAQFSAWQQHVAPLYDVRLPEGVTARDGFAVSQKVWDLRGMLLIEQAAPPFSYERTPEKV 131 Query: 64 KGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPR 123 + S + F SG++ D R + G I + P + + + L++P Sbjct: 132 RFSPIDHWQISFLRSGRSWTSVDGRVAENEPGMINIRSFGYPFRGRALAT-EAVLLIIPV 190 Query: 124 TLLEQYFPHQKPICAERLDADLP--MVQLSHRLLQESMNNPALSETESEAALQAMV--CL 179 + L ++ + A E AL+ +V + Sbjct: 191 DQFAGLGGMPEACNNATLGGYRAKLLIDFVSTIQTGLDRITAEDLPELRDALRQLVFDTI 250 Query: 180 LRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGL 239 + V + + I N+ L P+ ++ E +S LY++F G Sbjct: 251 VPLVRESDANAHGASLGLMTRARRFIQKNLMSRDLTPDALSRELAISRTHLYQLFEGSGG 310 Query: 240 VVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRR 298 V YIR +RL + + A+++ K++ I GF ++F+ F Q FG +P R+ Sbjct: 311 -VLNYIRQKRLFAAHEMLADASENRKVSDIAQLLGFETAANFTRAFTQHFGYSPTNVRK 368 >UniRef50_B6YY47 Transcriptional regulator, AraC family n=1 Tax=Pseudovibrio sp. JE062 RepID=B6YY47_9RHOB Length = 345 Score = 178 bits (451), Expect = 3e-43, Method: Composition-based stats. Identities = 48/298 (16%), Positives = 104/298 (34%), Gaps = 14/298 (4%) Query: 10 QQWLSQINQVCGNF---TGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGS 66 ++W + + G + E + + + ++T+ + R+ Q + Sbjct: 17 EEWREGVAEASGEVCLSSSSASPEAFGAGVRGSRYQSGFVATINATPHRFIRSSQRIARD 76 Query: 67 DDAWFYTVFQLSGQAIMEQDERQVQ-IGAGDITLLDASRPCSLYWQESSKQISLLLPRTL 125 + F + R I G + + D + P + KQ++L LPR Sbjct: 77 GMDAVFVQFYDHTHNCVTHMGRHSVDIEPGHLIIQDMAEPFVVEHSS-YKQMTLALPRAT 135 Query: 126 LEQYFPHQKPICAERLDADLPMVQLSHRLLQESM-NNPALSETESEAALQAMVCLLRPVL 184 L + + + A ++Q L++ + ++ + L+ + Sbjct: 136 LAPFLHGDRTYPTLCIPAIGGSANAVISMMQLLRGQLGDLTDEDVAPIVECIAKLVANQM 195 Query: 185 HQRESVQ------PRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKG 238 + V + +F + I L +A +S +LYR+F G Sbjct: 196 NNGPCVSFALDENSQNAARFLQAAEYISRTYSNPRLNSTEVAKHLNISRTTLYRLFEPMG 255 Query: 239 LVVAQYIRNRRLDFC-ADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGE 295 ++R R+ +R ++ K+ I GFS S F+ FK+ +G++P + Sbjct: 256 G-FVAFLRYIRMKHAMRKLLRTGSEVVKVQQIAESCGFSHASSFTRSFKEHYGVSPRD 312 >UniRef50_C7MQT8 DNA-binding domain-containing protein, AraC-type n=1 Tax=Saccharomonospora viridis DSM 43017 RepID=C7MQT8_SACVD Length = 347 Score = 177 bits (450), Expect = 4e-43, Method: Composition-based stats. Identities = 59/286 (20%), Positives = 109/286 (38%), Gaps = 11/286 (3%) Query: 24 TGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIM 83 R LT +++ ++ + + RT ++++ SD + V +G Sbjct: 29 EMRHLTSDPHLQQRDLPLDSMRMWAMSFAPMMFHRTPEQIEQSDPDTYNLVLLRAGTMRR 88 Query: 84 EQDERQVQIGAGDITLLDASRPCSLYWQES--SKQISLLLPRTLLEQYFPHQKPICAERL 141 ++ G GD+ + D+S P L I + +P+ LL + +L Sbjct: 89 VDATSEMTYGPGDMHVNDSSLPFQLEAHGCHMVSCIGVEVPKRLLPLPNDRVAALVGRKL 148 Query: 142 DADLPMVQLSHRLLQESMNNPA-----LSETESEAALQAMVCLLRPVLHQRE---SVQPR 193 A M L +L + + + + + L L E Sbjct: 149 SAREGMGGLLATVLDHLITGHGSYRSTDAPRLAVVLRETLAGLFARTLQDEEQYVPTAAY 208 Query: 194 RERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFC 253 R ++ ID ++ + L P IA +S+ ++R+F D G VA +IR RRL+ Sbjct: 209 RRDLLLRMRMFIDQHLSDPELGPRLIAAAHNVSISYVHRLFGDDGTTVAGWIRARRLERA 268 Query: 254 ADAIRHAADD-EKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRR 298 + A + I WGFS + F+ F+ +G+ P ++RR Sbjct: 269 RRDLCDPAMRIVPVHHIAARWGFSHHAAFTRAFRTAYGIAPRDFRR 314 >UniRef50_C6XP49 Transcriptional regulator, AraC family with acetamidase/formamidase activity n=2 Tax=Alphaproteobacteria RepID=C6XP49_HIRBI Length = 771 Score = 177 bits (450), Expect = 4e-43, Method: Composition-based stats. Identities = 58/306 (18%), Positives = 122/306 (39%), Gaps = 19/306 (6%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAK-GLKLSTVTTSGVNLSRTWQE 62 W + + + + + E G L + ++ + + ++ E Sbjct: 9 PKQQRKDAWNFVLQRF--SLSLLMSDEEPYGELASFKTGQNIQFIRIACTSQTIAMNLDE 66 Query: 63 VKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLP 122 F+ + L G + + I GDI ++ P L + S+ + + +P Sbjct: 67 ----GQPCFWMILALEGGVTVTSSKSSKDIKEGDIIYGGSNTPIKLTLLKESRFLIICVP 122 Query: 123 RTL--LEQYFPHQKPICAERLDADLPMVQLSHRLLQESMN-NPALSETESEAALQAMVCL 179 TL L+ P QK I ++ M ++ LL+ + +++ + A+ Sbjct: 123 DTLPVLKSRVPLQKDISNLV--SETTMGRMFSGLLRSVADVIADVTDDQLRPIETALPEF 180 Query: 180 LRPVLHQRESV------QPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRM 233 + L + +++ I+ + + L IA E G+S R L ++ Sbjct: 181 IAATLINNAPAKELGGAAGAKAALLERIFQSIEIRLSDPDLNVYQIAKEQGVSTRYLQKL 240 Query: 234 FADKGLVVAQYIRNRRLDFCADAIRHA-ADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMT 292 F G + ++++RRL+ C +R ++ I F WGF+D + FS F++++G++ Sbjct: 241 FETTGDSFSHFVKDRRLERCRLDLRSPLHAQRTISEILFQWGFNDSASFSRAFREKYGIS 300 Query: 293 PGEYRR 298 P +YRR Sbjct: 301 PRDYRR 306 >UniRef50_D0KWJ8 Transcriptional regulator, AraC family n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KWJ8_HALNC Length = 328 Score = 177 bits (449), Expect = 5e-43, Method: Composition-based stats. Identities = 62/297 (20%), Positives = 105/297 (35%), Gaps = 15/297 (5%) Query: 10 QQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDA 69 + W + + + + LK+ T S V + RT + Sbjct: 28 EAWSQLVC--LDVMPAEPTVPKLSASI--WSLGDLKIGTFDGSAVKMVRTTKL-AQDCAD 82 Query: 70 WFYTVFQLSGQAIMEQDERQVQI-GAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQ 128 + ++ GDI L A + + + L +PRT+L Sbjct: 83 DLIICIERKTPTRATWGGAGARVFVPGDIHLWRADGTMQCETKGAFSALLLSIPRTVLSN 142 Query: 129 YFPHQKPICAER-LDADLPMVQLSHRLLQE-SMNNPALSETESEAALQAMVCLLRPVLHQ 186 + P+ E + + P +L R ALS L +V L VL Sbjct: 143 HGIDIAPLLREGGICGNSPETRLLCRYTDSVLGEVDALSPMGVSCCLSHLVDLAMLVLGG 202 Query: 187 R-----ESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVV 241 R + R + + + ID ++ L W+ +S R L +FAD+ Sbjct: 203 RNTVRLANRHRVRSVRLASIKSDIDAHLLNPELSVGWVLRRHRISERYLRSLFADEDTSF 262 Query: 242 AQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRR 298 +++ RRL A+ + ++ I + GFSD S F+ F+QRF MTP + R Sbjct: 263 TRFVLERRLMRAHAALDQSG--RSISEIAYDCGFSDLSWFNRAFRQRFDMTPSQARA 317 >UniRef50_Q13QE0 Transcriptional regulator, AraC family n=1 Tax=Burkholderia xenovorans LB400 RepID=Q13QE0_BURXL Length = 346 Score = 177 bits (449), Expect = 5e-43, Method: Composition-based stats. Identities = 59/307 (19%), Positives = 112/307 (36%), Gaps = 13/307 (4%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLL-TERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 A D +F W ++ V + + G +D + G+ L+ T + L R+ Sbjct: 33 APDEQFLAWRQRVGHVVDAPPSKAQIAGGFRGEIDLYAVGGMVLTDCRTDSMLLERSVAR 92 Query: 63 VKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGD---ITLLDASRPCSLYWQESSKQISL 119 V + + G R+ + G I D ++P E + +SL Sbjct: 93 VSTDSRRDYAFQLFVEGGVGHVTGMRKKRSEPGSVQGIVAFDLNQPFRAERPE-CRLLSL 151 Query: 120 LLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN-PALSETESEAALQAMVC 178 +P ++++ I + P+ + + P L + AL A Sbjct: 152 FVPAAVVDEELRDGAAIHGRIVQQGSPLTGVVLDHMTALAREIPHLDPASAIEALHAGAQ 211 Query: 179 LLRPVLHQRESVQPRRERQFQ-----KVVTLIDDNIREEILRPEWIAGETGMSVRSLYRM 233 L+ + + Q +V I+ N+ + L P + + ++YR Sbjct: 212 LMVSAFRKDARLSGAGRAALQAAVMGRVRRYIEANLHQGDLTPTSVVQALQLKRATIYRW 271 Query: 234 FADKGLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTP 293 F +G + YIR+RRL AD + ++ I F GF S F+ F++ F ++P Sbjct: 272 FEHEGG-LGAYIRHRRLREAADELVR-YPHLQVTEIAFGLGFHSASDFTRAFRRAFDISP 329 Query: 294 GEYRRKF 300 + R + Sbjct: 330 QDMRARA 336 >UniRef50_B6YYX2 Transcriptional regulator, AraC family n=1 Tax=Pseudovibrio sp. JE062 RepID=B6YYX2_9RHOB Length = 322 Score = 176 bits (448), Expect = 7e-43, Method: Composition-based stats. Identities = 69/299 (23%), Positives = 136/299 (45%), Gaps = 7/299 (2%) Query: 9 FQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDD 68 +W +++ ++CG+F T TG + + VT + ++R ++ + Sbjct: 15 LDEWNTRLTEICGHFVTNTETGSVTGNASLLHLGDVDCARVTHNAREITRGPSDISKDGE 74 Query: 69 AWFYTVFQLSGQAIMEQDERQVQI-GAGDITLLDASRPCSLYWQE--SSKQISLLLPRTL 125 A+++ + QL G+A +EQ+ + + GD+TL+D+ + S QIS+ +PR L Sbjct: 75 AYYFLILQLRGEAELEQNGQTALLSSPGDMTLIDSVKSSVFRANRELGSDQISIHIPRHL 134 Query: 126 LEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPVLH 185 L + F C ++ A QL + L ++ S+ + + + L Sbjct: 135 LHKQFNST-YACGRKISAVSGAGQLINAHLNILLSAQPGSQKQHLLSGAFHDVVSATFLD 193 Query: 186 QRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYI 245 + S + Q +++LI DN EE + ++ + MS S+YR+F + GL + I Sbjct: 194 EDTSTLQEGYDKLQLLLSLIHDNALEENFNIDELSKLSSMSRSSIYRLFREHGLSCNEQI 253 Query: 246 RNRRLDFCADAIR---HAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKFR 301 R+ + H+ D +++ + F +GF D S F+ F+ + GM+P + + R Sbjct: 254 AKVRVGRFKRELSRRLHSRQDFRISQLAFEFGFRDLSTFNRAFRAQVGMSPRNFAEQIR 312 >UniRef50_A5HV12 Probable transcriptional regulator n=1 Tax=Pseudomonas putida RepID=A5HV12_PSEPU Length = 311 Score = 176 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 56/297 (18%), Positives = 116/297 (39%), Gaps = 7/297 (2%) Query: 3 PAVDNEFQQWLSQINQVC-GNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSR--T 59 A + W + +N NF R +L + ++ + L+ T Sbjct: 10 SADADSPSLWGNALNNAMSTNFEVENFEPRGRAILRSSKFGAGEIYSALAPSQVLAHINT 69 Query: 60 WQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISL 119 +V Y + +G ++ + R + + G TL+D+ L ++ + + Sbjct: 70 RSDV--DGSDSVYIIQIRNGGMEVKSNGRAIFLADGSCTLVDSRLNFRLSSNATTNGLIV 127 Query: 120 LLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSET-ESEAALQAMVC 178 LP LE + + A+ + +D + LL A S + + + Sbjct: 128 RLPERWLESWLTNPDDYAAQEIKSDTGWGKSLCSLLLNLDPMDAEQLGNHSNSLSEHIAL 187 Query: 179 LLRPVLHQRESVQPRRER-QFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADK 237 LL + + + R + ++++++++ + L PE I+ G+S R L+ FA Sbjct: 188 LLSLSKREASHLSEGKNRSKIREILSMLETELSNINLSPELISERLGVSKRHLHYQFAAC 247 Query: 238 GLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPG 294 G ++ + + RL + A + + I GF D SHFS F++++G+ P Sbjct: 248 GTTFSKELLDIRLKHAYKLLSDGATAKSVLEIAMTTGFCDSSHFSKKFREKYGVPPK 304 >UniRef50_B1FI04 Transcriptional regulator, AraC family n=1 Tax=Burkholderia ambifaria IOP40-10 RepID=B1FI04_9BURK Length = 341 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 54/304 (17%), Positives = 106/304 (34%), Gaps = 17/304 (5%) Query: 14 SQINQVCG--NFTGRLLTERYT--GVLDTHFAKGLKLST----VTTSGVNLSRTWQEVKG 65 ++ + R+ G + +++ ++ + R + Sbjct: 21 QRLCEAFDGERLELEASRNRFEPVGKITRRRLSSIEMLRSEAAISNGPFGIRRDSKS-GR 79 Query: 66 SDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTL 125 V L+ Q E + GDI L+ P L + + + LP+ Sbjct: 80 GGQDELILVVVLASQLSCEIGNSYYTLAEGDIALIGPEHPSRLEFSAGFDGLWVRLPKIE 139 Query: 126 LEQYFPHQKPICAERLDADLP-MVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPVL 184 + + D+ M L LL + +++ +++ L+ + Sbjct: 140 SHIRRVIFQDAVDRKFDSRRGIMHVLLRTLLTTYESANSIAGDSVPWLESSLLDLIAAAV 199 Query: 185 HQ------RESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKG 238 Q++ + I + ++ L P IA G+SVR L +FA Sbjct: 200 SASSIVAREGHATTYSRATLQRIKSHIVARLHDDTLTPSSIASAMGISVRRLNELFAQCQ 259 Query: 239 LVVAQYIRNRRLDFCA-DAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 V ++I RL+ C + + E + + + GF + SHF+ FK RFG +PG+ R Sbjct: 260 TTVTEWIIAERLERCRKRLLLRSQVRETICQVAYEEGFKNISHFNRAFKNRFGESPGQLR 319 Query: 298 RKFR 301 + R Sbjct: 320 DRIR 323 >UniRef50_A8SBA6 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SBA6_9FIRM Length = 286 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 42/234 (17%), Positives = 76/234 (32%), Gaps = 9/234 (3%) Query: 69 AWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASR--PCSLYWQESSKQISLLLPRTL- 125 + +SG+ I E R ++ GD+ S+ + Q+ + + Sbjct: 41 DHYLIHLVVSGKGIFEVGGRTWEVSEGDLFFARPSQLIRYTADEQQPWEYSWVGFNGACA 100 Query: 126 --LEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPV 183 L P M + P + L+R Sbjct: 101 HKLAAQLPFTDDAPVHHTSDPDGMRAALTNIYSSRGLQPQDEAAMVGYLYLFIAALMRET 160 Query: 184 LHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFA-DKGLVVA 242 + + + I N + + +A G+S LYR+F + G Sbjct: 161 SAGKPHTASSSSQYVLNAIKYIQFNYS-HDISIDDVAKSVGVSRSHLYRVFMLNVGKSPI 219 Query: 243 QYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEY 296 Y+ R++ +R A + +A + GF DQ +FS VFK+ G+ P +Y Sbjct: 220 DYLTEYRINEACKLLR--AGNLSIAEVAVSVGFFDQFYFSRVFKRAKGVPPSKY 271 >UniRef50_A4U4I6 Transcriptional regulator, AraC family n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U4I6_9PROT Length = 369 Score = 174 bits (442), Expect = 3e-42, Method: Composition-based stats. Identities = 60/299 (20%), Positives = 104/299 (34%), Gaps = 7/299 (2%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLLTERYTG-VLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 + + W I + + + R + + + S R Sbjct: 31 PAEQQEDLWCQSIAPMLESRSCRQPDQAGKAPEIHQYHLGRFLYIDTIFSRRTFRRDRGL 90 Query: 63 VKGSDD-AWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLL 121 + DD + G+ + I G + ++ + E S + ++L Sbjct: 91 MARHDDADHLSLQLFVDGRNQVANGGIDYTIVPGKVYGVNLAYSVE-AVAEDSDAVVMVL 149 Query: 122 PRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN-PALSETESEAALQAMVCLL 180 PR L+ PH + + + L + P+ S A Q+++ LL Sbjct: 150 PRQLVLDEVPHLAGLRGQVFADNSVCNHLLRDHMLSLRRLLPSASMDSIPALTQSLLGLL 209 Query: 181 -RPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGL 239 + H + F + ID + + L E I + S +LYR+F G Sbjct: 210 DALMGHGDTGAAQVQTAMFASICRHIDSQLNDSDLGVESICAKFRCSRATLYRLFKPHGG 269 Query: 240 VVAQYIRNRRLDFCADAIRHAAD-DEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 V +YI+ RRL C I + + I +GF SHFS +F+ FGM+P E R Sbjct: 270 -VREYIQRRRLMACFKVITGSRHMHRGIFDIALDFGFISPSHFSHLFRSHFGMSPSEAR 327 >UniRef50_B1LSW4 Transcriptional regulator, AraC family n=2 Tax=Alphaproteobacteria RepID=B1LSW4_METRJ Length = 319 Score = 174 bits (441), Expect = 4e-42, Method: Composition-based stats. Identities = 74/298 (24%), Positives = 125/298 (41%), Gaps = 6/298 (2%) Query: 5 VDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVK 64 F+ W G+ R ER++ + + G L+ +S V L + V Sbjct: 19 PKRAFEFWRCTALARFGDIGRRHPRERFSAKRLSVASAGWSLTHTVSSPVELEFRSRHVD 78 Query: 65 GSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRT 124 + A L G EQ R Q+ GDI+ L +RP Q + ++I L +PR Sbjct: 79 RNARAMVVIGLGLDGVGYHEQHGRGAQLNPGDISFLTRNRPFVAGTQSAYEEIRLAVPRE 138 Query: 125 LLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRP-- 182 + E + L ++ RL + + +S E++AA++ ++ LL Sbjct: 139 MFEAWIGAADAFAGRSLGPQPAGAEVRARLRGVAGSIAWMSADEAQAAVEGVLHLLGHLV 198 Query: 183 --VLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLV 240 + + + I + + L P+ I G+S SLYR FA+ G Sbjct: 199 DGAARRGDPEAVSQAAVVSLARAHIARRMHDPDLNPQDIQRALGLSRTSLYRAFAETGG- 257 Query: 241 VAQYIRNRRLDFCADAIRHAADDE-KLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 +A IR+ RLD + DD+ ++A I + GF+D F+ F++RFG+ PG+ R Sbjct: 258 IAAAIRDARLDLARRRLEARRDDKVRIASIAYACGFTDVPTFNRGFRKRFGLAPGDLR 315 >UniRef50_B2WW34 Transcriptional regulator n=1 Tax=Streptomyces albus RepID=B2WW34_9ACTO Length = 335 Score = 174 bits (441), Expect = 4e-42, Method: Composition-based stats. Identities = 62/313 (19%), Positives = 107/313 (34%), Gaps = 15/313 (4%) Query: 2 NPAVDNEFQQWLSQINQVCGNFTG--RLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRT 59 A + + + ++ GL L + SG + R Sbjct: 23 TVAPRERAEAFRHALTDSLVPNDIAHEEPETGIHARMELWSVGGLDLFSTRNSGFEVRRG 82 Query: 60 WQEVKGSDDAWFY-TVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQIS 118 + V+ Q G E R+ +G DI + P + W S Sbjct: 83 ERHVRHHRSRPVVSVSLQPRGTHRAEVAGRRNLLGQDDICVFHELSPRTYGWSGDGSSQS 142 Query: 119 LLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNP---------ALSETES 169 ++ L P + + A PM L L+ +P T + Sbjct: 143 IMFDMDRLG--VPVETVVGAAPHLRASPMYDLVLNHLRGVWRDPGRLAADPGAEALATAT 200 Query: 170 EAALQAMVCLLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRS 229 ++A++ E +V+ ++ + L PE IA E +SVR+ Sbjct: 201 TGLVRALLLSAALSDDSPAVRSALDETLLTRVLAYARRHLADRDLTPERIAQEHAVSVRA 260 Query: 230 LYRMFADKGLVVAQYIRNRRLDFCADAIRHAADDE-KLAGIGFHWGFSDQSHFSTVFKQR 288 LY + D G+ + Q++ RL + + D +A + GFS SHFS F+ Sbjct: 261 LYLLLNDAGISLEQWLITERLARARQMLAASRYDRLTVAAVAARCGFSSPSHFSRRFRAA 320 Query: 289 FGMTPGEYRRKFR 301 +G +PG++RR R Sbjct: 321 YGSSPGDWRRLSR 333 >UniRef50_Q2ITV5 Transcriptional regulator, AraC family n=1 Tax=Rhodopseudomonas palustris HaA2 RepID=Q2ITV5_RHOP2 Length = 332 Score = 174 bits (441), Expect = 4e-42, Method: Composition-based stats. Identities = 53/302 (17%), Positives = 99/302 (32%), Gaps = 12/302 (3%) Query: 8 EFQQWLSQINQVCGNF--TGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKG 65 F +W RL + + ++ + +SR Q+V Sbjct: 26 RFSRWRDIYTASFLQSGNVVRLSDRPFAATWEHAQIGDSLVARFEGTLQRVSRDAQQVAA 85 Query: 66 SDDAWFYTVFQL-SGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRT 124 F + S + M Q R++ + G + S + +I LPR Sbjct: 86 HPVDRFCISYNRASSRQAMVQRGRELTLEPGTPAFFNLSEMLDCRSEHGEARIGFTLPRK 145 Query: 125 LLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNP--ALSETESEAALQAMVCLLRP 182 L PH + + LD + L + AL ++ LL Sbjct: 146 TLLDSIPHAEDLVLRPLDPGDDALLHLRWYLDFLLERDGAALDPAMVAHVQSVLIDLLGL 205 Query: 183 VLHQRESVQPRRERQFQKVVTL------IDDNIREEILRPEWIAGETGMSVRSLYRMFAD 236 L + + + + V I + +A + +S R + + + Sbjct: 206 ALGVGRDLAEASKLRGLRAVRFMTIVAEIGAGFADPGFSAARLAAKLNLSSRYIQDILHE 265 Query: 237 KGLVVAQYIRNRRLDFCADAIRHA-ADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGE 295 G+ + + + RL + + K+ I GFSD SHF+ F++RFG +P + Sbjct: 266 SGVTLTERVLELRLQKARRLLASGLSPALKVTDIALSCGFSDVSHFNHSFRRRFGASPTQ 325 Query: 296 YR 297 +R Sbjct: 326 FR 327 >UniRef50_D0XVC6 Transcriptional regulator, AraC family n=1 Tax=Caulobacter segnis ATCC 21756 RepID=D0XVC6_9CAUL Length = 347 Score = 173 bits (439), Expect = 6e-42, Method: Composition-based stats. Identities = 66/293 (22%), Positives = 113/293 (38%), Gaps = 10/293 (3%) Query: 14 SQINQVCGNFTGRLLTERYTGVLDTHFAKGLKL--STVTTSGVNLSRTWQEVKGSDDAWF 71 I V + E + + + L + ++ R ++V + Sbjct: 28 EAIAPVFDTRLCDVGPEGPDLWISSVNVGPMLLGYAHMSGGTYGYGRDHRKVAATGLDLI 87 Query: 72 YTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFP 131 G + +V+ GD+ LLD SR Q SL +PR L Sbjct: 88 LVQIIAEGSDRRQAHRSEVETQVGDVCLLDLSRSFQSEAQT-CGNFSLAIPREALAARDR 146 Query: 132 HQKPICAERLDADLPMVQLSHRLLQESMNNPAL-----SETESEAALQAMVCLLRPVLHQ 186 + L D P +L ++ + + + + + L P + Sbjct: 147 DLDDLHGRVLRYDTPAARLLKGHVETIWSMTGALSIHDAPAVGRSTIDLLAGLALPTSDR 206 Query: 187 RESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIR 246 +++ + E + ++ ID N+ E L PE ++ + G+S SLYR+F G V ++I+ Sbjct: 207 QQARRAVSESRLTQIRRFIDANLHEPGLGPEMLSRQFGLSRASLYRLFEPLGG-VREHIQ 265 Query: 247 NRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRR 298 RRL DA+ + L+ + GFS S F+ FK RFGM+PGE R Sbjct: 266 GRRLRRVFDALTDPSLRHLPLSQVAEGHGFSAWSSFARAFKARFGMSPGEARE 318 >UniRef50_B8H192 Transcriptional regulator n=3 Tax=Caulobacter RepID=B8H192_CAUCN Length = 446 Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats. Identities = 68/301 (22%), Positives = 119/301 (39%), Gaps = 12/301 (3%) Query: 6 DNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKG 65 + +++ Q+ + +D + G+ L+ R + + Sbjct: 123 ADAAERYRQACAQLFDVTLLEP-DTAFHNRMDGYNLGGVVLARCKGVPQRFDRRYAHIIA 181 Query: 66 SDDAWFYTVFQLS-GQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRT 124 V +LS G D R G G I L+D SRP + + + ++L +PR Sbjct: 182 DTADSVLAVLELSSGGWSGIYDGRPADSGMGAIRLVDMSRPFDMT-TAAFETLNLAIPRA 240 Query: 125 LLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN-PALSETESEAALQAMVCLLRPV 183 L++ H + + ++ ++ ++ ++ E+ A +A L Sbjct: 241 TLDEQVDHID-FHGRVVSENTATGRILGAHMRAVWDSIETITTAEAALAAKAAATLFSAA 299 Query: 184 LHQRESVQPRRER-----QFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKG 238 + V R + + + L PE + G+S LYR+F G Sbjct: 300 ILAHGEVAGADARPIEKMLLASARDFVIGRLADPELSPEAVRQHLGVSRSLLYRVFEPAG 359 Query: 239 LVVAQYIRNRRLDFCADAI-RHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 V+ +I+ RRLD D I R ++ + LA IG+ GF +HFS VF+ RFG+TPG R Sbjct: 360 G-VSAFIQARRLDQAFDEIIRDQSERKTLAEIGYGLGFRSDAHFSRVFRARFGVTPGRLR 418 Query: 298 R 298 R Sbjct: 419 R 419 >UniRef50_A2SLW3 Transcriptional regulator, AraC family n=22 Tax=Bacteria RepID=A2SLW3_METPP Length = 844 Score = 171 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 50/302 (16%), Positives = 100/302 (33%), Gaps = 16/302 (5%) Query: 8 EFQQWLSQINQVCGNFTGRLLTERYT-GVLDTHFAK-GLKLSTVTTSGVNLSRTWQEVKG 65 W + +V G + + + + +S + Sbjct: 18 RPAAWAEVMAKVLMAPAAPAYDAPPLAGYVSARSSALESVFARLGSSPQVWLPHPGNARR 77 Query: 66 SDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTL 125 L G ++ + + V + AG I LLD +RP + + + + L Sbjct: 78 GGHTVLMLAL-LEGSGLVVEGQESVALAAGGIVLLDPARPWRVELNTDFRAVVIRLESAS 136 Query: 126 LEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNN-PALSETESEAALQAMVCLLRPVL 184 + + + L++ + L E ++ LL L Sbjct: 137 FVLRLVRTSGQDLNTISPKTGVGAVCLNLVRSIADELDQLGRHELLPIEATLMELLVTCL 196 Query: 185 HQRESVQPRRER-----------QFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRM 233 + + ++V ++ + + L E IA G+S R + ++ Sbjct: 197 SHVDDEDAQAAASPDDSTSVQLGHLRRVCRTVEARLGDAELTLEAIAALEGLSPRYIQKL 256 Query: 234 FADKGLVVAQYIRNRRLDFCADAIRH-AADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMT 292 F +Y++ RRL+ C + + A +A + F WGF D ++FS F RFG++ Sbjct: 257 FKAASASFGEYLKARRLERCRLDLANRALAHFTIAELCFRWGFGDAANFSRAFTARFGVS 316 Query: 293 PG 294 P Sbjct: 317 PK 318 >UniRef50_B5GZF8 Transcriptional regulator n=1 Tax=Streptomyces clavuligerus ATCC 27064 RepID=B5GZF8_STRCL Length = 343 Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats. Identities = 52/307 (16%), Positives = 100/307 (32%), Gaps = 15/307 (4%) Query: 5 VDNEFQQWLSQINQVCGNFTG--RLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 + + +++ + + SG + RT + Sbjct: 9 PRERAAAFRHALTHESVPNDIVHEGSGPDLRARMESWRIGTVTCFSTHNSGFAVHRTAEH 68 Query: 63 VKGS-DDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLL 121 V+ Q +G E + +G D+ + P W + ++L Sbjct: 69 VRRHRSQPVVSVSMQTAGVGRAEAGGERWLLGPDDLCVFHELTPRVYGWSGTGASQAVLF 128 Query: 122 PRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNP------ALSETESEAALQA 175 L P+ L R L++ +P + + A + Sbjct: 129 DVDRLGLPVEAVLKASLRL--RASPLHDLVLRHLRDLFRDPGPLEEDPGAAALANATTEL 186 Query: 176 MVCLLRPVLHQRESVQPRR---ERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYR 232 + LL +H + R + +V++ + + + L P IA E +S+R LY Sbjct: 187 VRSLLLSAVHDERTPPVRAVMDDTLVTRVMSAVRTRLTDPALTPARIAAEHAVSLRHLYG 246 Query: 233 MFADKGLVVAQYIRNRRLDFCADAI-RHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGM 291 + G+ + Q+I RL + +A + GF SHFS F+ +G+ Sbjct: 247 VLGRAGIGLEQWIITERLSLARRMLVSDVHRHLPIASVAARCGFLSPSHFSRRFRAAYGV 306 Query: 292 TPGEYRR 298 TP E+R Sbjct: 307 TPREWRN 313 >UniRef50_C9YUP3 Putative DNA-binding regulatory protein n=1 Tax=Streptomyces scabiei 87.22 RepID=C9YUP3_STRSW Length = 326 Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats. Identities = 56/302 (18%), Positives = 111/302 (36%), Gaps = 6/302 (1%) Query: 5 VDNEFQQWLSQINQVCGNF-TGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEV 63 W +I G ++ + G +L + + +RT ++V Sbjct: 18 PRERADFWTERIGSYQSRMGFGYARSDDFRGETVRQRTDTYQLVKYRSDEIEYTRTMRQV 77 Query: 64 KGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPR 123 D + + +SG+ ++ QD + ++ G L+ + P ++ L +P Sbjct: 78 HRDPDEDYRLLLPMSGEIVLRQDGGEARLTPGTAALVTFAAPFQCLQSDAIDAFVLTIPA 137 Query: 124 TLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESM-NNPALSETESEAALQAMVCLL-- 180 ++ + P+ A LD + ++ +L LS+ E A +V L+ Sbjct: 138 REVDGRLGTRSPV-ASGLDLTTGLGRIVGSMLTGLHEEREHLSDAEFNAVSDRVVELVCM 196 Query: 181 RPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLV 240 R + V + D++ + L +A G S+R + G Sbjct: 197 LTAGDDRPDAPGQLGEVEALVRRYVRDHVADPNLTGTAVARALGWSLRQIQLALQQAGTT 256 Query: 241 VAQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRK 299 + IR RL D + A + + + + GFS S ST F++R+ ++P E R+ Sbjct: 257 PRELIREERLRLVRDRLLCAECEHMTITDLAYAAGFSSASALSTAFRRRYDVSPREMRQS 316 Query: 300 FR 301 R Sbjct: 317 AR 318 >UniRef50_C3JEA3 Transcriptional regulator, AraC family n=2 Tax=Rhodococcus erythropolis RepID=C3JEA3_RHOER Length = 335 Score = 170 bits (431), Expect = 5e-41, Method: Composition-based stats. Identities = 63/303 (20%), Positives = 104/303 (34%), Gaps = 10/303 (3%) Query: 5 VDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVK 64 + W S G + + T + +R + + Sbjct: 17 PADADDFWRSATRPFFVTDRIDP-DTSLEGSITALSIGTSLIGQTTFNAQKYTRNNRLIA 75 Query: 65 GSD-DAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPC--SLYWQESSKQISLLL 121 S D + L GQ D GD+T D R + + + I+LL Sbjct: 76 ESGLDDEYMVQVVLDGQLSGNADGVDFVARQGDVTFFDLGRTWTADAEAESTGRTITLLA 135 Query: 122 PRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLR 181 PR+L+E + + L +P V L+ + + P L + + LLR Sbjct: 136 PRSLVEAESKG-RSLHGTVLRG-VPAVVLAQCMQSVVLALPHLDPDAAAGYEDVVASLLR 193 Query: 182 PVLHQRESVQPRRE--RQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGL 239 L E R + I +++ E L P + +S LYR FA G Sbjct: 194 VSLGIAEPDLSPRPDHSLRDRAYAYIAEHLSETWLGPTSMCAALSVSRAQLYRAFASDGG 253 Query: 240 VVAQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRR 298 +A IR +RL+ + +E + + GF+ +S + FK +GMTP + R Sbjct: 254 -IALVIRRKRLELVYRELTRTEMPNETIEALALRCGFTSKSQLARAFKDFYGMTPSQART 312 Query: 299 KFR 301 R Sbjct: 313 DGR 315 >UniRef50_C7HYF2 Transcriptional regulator, AraC family n=1 Tax=Thiomonas intermedia K12 RepID=C7HYF2_THIIN Length = 312 Score = 169 bits (430), Expect = 7e-41, Method: Composition-based stats. Identities = 55/296 (18%), Positives = 125/296 (42%), Gaps = 8/296 (2%) Query: 10 QQWLSQINQVCGNFTGRLLTERYTGVL-DTHFAKGLKLSTVTTSGVNLSRTWQEVKG--- 65 W +++ L + G + FA L ++ +T ++ + Q + Sbjct: 14 ASWEQLLSRRFVPGHTSLTSADPGGHIGQEVFAGALSMTPLTLQPQIITHSAQHLSALSA 73 Query: 66 SDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTL 125 + + G+ ++EQ ++ AGD++ + +P + ++ ++ I++ +PR Sbjct: 74 DVRDTVLSHIVIEGEGVIEQKGATLRFRAGDLSFRNLQQPSRIVFETPARLIAVRMPRGA 133 Query: 126 LEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPVLH 185 L + + L + + LL S S A + Sbjct: 134 LLWHQARSDRR--QLLRPRVVASYGLNTLLPVSDQGSVSSLYAGFALPWLFAAAYYSIER 191 Query: 186 QRESVQPRRERQFQKVVTLIDDNIRE-EILRPEWIAGETGMSVRSLYRMFADKGLVVAQY 244 E +P ++Q+V++ ++ ++ + L P A G+S R LYR+ + +G+ ++ Sbjct: 192 DAEPAKPPNATRWQQVLSYVETHLFDASALSPADCARAVGISERYLYRLASLRGITFSRL 251 Query: 245 IRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRK 299 +++RRL+ + H A +A + + GF++ +HFS ++Q FG +P + R+ Sbjct: 252 VKHRRLETARALLEHPASRHVSIASVAYQCGFTEPAHFSRAYRQHFGQSPRQSRKS 307 >UniRef50_A4Z0B3 Putative Transcriptional regulator, AraC/XylS family n=1 Tax=Bradyrhizobium sp. ORS278 RepID=A4Z0B3_BRASO Length = 319 Score = 169 bits (430), Expect = 8e-41, Method: Composition-based stats. Identities = 49/303 (16%), Positives = 108/303 (35%), Gaps = 12/303 (3%) Query: 6 DNEFQQWLSQINQVCGNFTGRLLTE-RYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVK 64 F + + + ++ L + + R ++V Sbjct: 20 RQRFLCFAELFEHFSNTGELDPAEDVPFRAAMNAIHIGTTLLGRCDGTFTRVRRERRQVL 79 Query: 65 GSDDAWFYTVFQL-SGQAIMEQDERQVQIGAGDITLLDASRPC-SLYWQESSKQISLLLP 122 ++D + +A++ R+ + G + LL P S + +++ LP Sbjct: 80 ATNDDRYCLARNAGHREAMVVHRGREFVLRPGAMVLLKLDEPFFSADGASHKRFVNVHLP 139 Query: 123 RTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRP 182 L P + L+ + L+ + + P ++ A Q ++ L+ Sbjct: 140 MVTLRSMVPGVDDLVGRELEPG-GALSLAMDYSELLLARPTAADEAGTAVAQHLLDLVAL 198 Query: 183 VLHQR------ESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFAD 236 L R R + V+ ++++ E + +A G+S R + + + Sbjct: 199 GLGVRGEVMHKARRGGLRSVRLSGVLAILNERFAEPDFSAQKLATAAGLSERYVNDLLYE 258 Query: 237 KGLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEY 296 G + + RL D + + +++ I F GF+D S+F+ F++RFG+TP Sbjct: 259 AGASFSARLNELRLRRAMDLLADG--ERRVSDIAFACGFNDLSYFNRCFRRRFGLTPTAA 316 Query: 297 RRK 299 R + Sbjct: 317 RGR 319 >UniRef50_Q1LF91 Transcriptional regulator, AraC family n=1 Tax=Cupriavidus metallidurans CH34 RepID=Q1LF91_RALME Length = 333 Score = 169 bits (430), Expect = 8e-41, Method: Composition-based stats. Identities = 54/307 (17%), Positives = 103/307 (33%), Gaps = 9/307 (2%) Query: 2 NPAVDNEFQQWLSQINQVCGNFTGR-LLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTW 60 + + + + + + G+ + + Sbjct: 16 DVPQSQRYDYYAHALATAIFPIQLSGSAPSAFGVDMSAADLGGMTVIRQRGTPHRCFADR 75 Query: 61 QEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLL 120 + ++ F+ + +E R+ ++G GD+ + D+S P +L + + Sbjct: 76 GNIARAEGRTFHLLTSTRSAWTLEHLTRE-RLGPGDVIMCDSSIPFNLEIGNDFNIVHVA 134 Query: 121 LPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESM-NNPALSETESEAALQAMVCL 179 L + Q+ P + R+DA+ + LQ A + L Sbjct: 135 LSEAWIRQWLPAPSVLVGARIDANDSWGRALSAFLQSLEPARLADYPLPRSFIGDHIGSL 194 Query: 180 LRPVLHQRESVQPRR-----ERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMF 234 L + R +V P+ ++ + RE L +A +SVRSL+R F Sbjct: 195 LAFLAQSRSAVPPKPAKTEGAAVLDRIRDCMAGQSREATLCAADVAAAVSISVRSLHRHF 254 Query: 235 ADKGLVVAQYIRNRRLDFCADAIRHAA-DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTP 293 A + R + ++ +A IG GF+D +HFS V + R G TP Sbjct: 255 ARSSTTFGAVLMAMRCADAVRMLESSSFSRLTVAEIGRRAGFADAAHFSRVMRARVGHTP 314 Query: 294 GEYRRKF 300 + RR Sbjct: 315 NQLRRAH 321 >UniRef50_C8X7M3 Transcriptional regulator, AraC family n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8X7M3_NAKMY Length = 336 Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats. Identities = 51/296 (17%), Positives = 108/296 (36%), Gaps = 9/296 (3%) Query: 4 AVDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEV 63 + + +F+ + V + ++ + + +S + + ++ R+ + + Sbjct: 20 SAEEQFELFHDTTAPVFDTLPSGSPAD-FSAQATDYLVGDVVISRIAHAPQSMRRSIRHI 78 Query: 64 KGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPR 123 + + + G+ + D ++ + + + ++D +R + ++PR Sbjct: 79 RCGSEDALAVLVYRRGRVDLSFDRTEMTLDSQHVGIIDLARSF-YAACTDIDSVWAVIPR 137 Query: 124 TLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESM-NNPALSETESEAALQAMVCLLRP 182 L RL D P ++ + P S ++ Q ++ + Sbjct: 138 RRLRASLGRS---PCARLHRDSPRGRVLRSTVISVWNRLPNASAEDATTLAQEIIDATQS 194 Query: 183 VLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVA 242 VL P + + ++ + L +A S +L+R+FA G VA Sbjct: 195 VL-TDGDFAPSDTALAVAMSDFVIAHLDDLDLDARMLARTFHCSRSTLFRIFAPHGG-VA 252 Query: 243 QYIRNRRLDFCADAIRHA-ADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 YIR+ RLD C D + + I WGF + SHF +F R+G P R Sbjct: 253 AYIRDARLDRCLDELLEPYESTRTVHQIATRWGFENPSHFHRLFTTRYGTPPSTAR 308 >UniRef50_Q3KZ34 Putative regulator AraC-type n=1 Tax=Pimelobacter simplex RepID=Q3KZ34_NOCSI Length = 396 Score = 169 bits (428), Expect = 1e-40, Method: Composition-based stats. Identities = 51/283 (18%), Positives = 106/283 (37%), Gaps = 4/283 (1%) Query: 11 QWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAW 70 W + + R+ ++++ V + ++R V+ Sbjct: 20 AWERHNAEALIELACAIPAGRFRAREVNLQVDRVRVAHVAGTPHAVARDAALVESRPVDA 79 Query: 71 FYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYF 130 L +A++E R+ G + + D RP + +++++ +PR L + Sbjct: 80 IAVYAALRRRALLEAGGRRRVSRPGQLLVCDVDRPFLRGFGHGLEELAVSIPRLLFTEVT 139 Query: 131 PHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPVLHQRESV 190 DA + L + + ++ A +A++ L+ + ++ Sbjct: 140 GLASLDSPLVFDAAGAGSDPHAKALVQLVGRSVAADLRVPADERAVLELVSVLATGSNAL 199 Query: 191 QPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRL 250 + IDD++ + L + G+S R + R+FAD G V + I RRL Sbjct: 200 ALAHRAAAR---AYIDDHLTDPALSAVDVRAGAGISERQVSRIFADAGTSVPRQILARRL 256 Query: 251 DFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTP 293 D + + + + GF+ S+FS F++RFG+TP Sbjct: 257 DLAHALLASGTGERTV-DVAARCGFASASYFSQAFRRRFGVTP 298 >UniRef50_Q0S609 Possible transcriptional regulator, AraC family protein n=1 Tax=Rhodococcus jostii RHA1 RepID=Q0S609_RHOSR Length = 326 Score = 169 bits (428), Expect = 1e-40, Method: Composition-based stats. Identities = 60/304 (19%), Positives = 109/304 (35%), Gaps = 19/304 (6%) Query: 16 INQVCGNFTGR---------LLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGS 66 + + + + G + + + +++ L+ +EV+ + Sbjct: 1 MCEAFTPLAPQRGRAQTARSATPDGIPGWVRSEALVETNCAEISSCTQLLTHGPREVRRA 60 Query: 67 DDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQES-----SKQISLLL 121 + QL G EQD R+ + G + D +RP +L ++E + +S + Sbjct: 61 PLDALFVNLQLEGTCHGEQDGRRCIVHPGSYAVFDTTRPYTLEFREPDDAASWRVLSFRI 120 Query: 122 PRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMN-NPALSETESEAALQAMVCLL 180 PR A +D + ++ PA +T ++ +L Sbjct: 121 PRDQWSANVRGVGA-TARAIDTTSGPGNVVGAMMSSLWRERPAFDQTTVRTLERSFTDVL 179 Query: 181 RPVLHQRES---VQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADK 237 V + R Q V I + + A E +SVR+L+R+F Sbjct: 180 AAVTEPPAGGTRTEGRDAALRQIVRHYIRSAVPLGRVTAAAAAREAAVSVRTLHRLFQAV 239 Query: 238 GLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYR 297 G A+ +R+ RL + A D ++ I WGF D SH + F+ G TP E+R Sbjct: 240 GATFAECVRDERLQGAMQDLAVAPDSVTVSEIAARWGFYDSSHLTRTFQSCLGCTPTEFR 299 Query: 298 RKFR 301 R Sbjct: 300 VTSR 303 >UniRef50_A5EGC6 Transcriptional regulator, AraC family n=1 Tax=Bradyrhizobium sp. BTAi1 RepID=A5EGC6_BRASB Length = 317 Score = 169 bits (428), Expect = 1e-40, Method: Composition-based stats. Identities = 70/294 (23%), Positives = 109/294 (37%), Gaps = 5/294 (1%) Query: 6 DNEFQQWLSQINQVCGNFTGR-LLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVK 64 + W + + GV+D LKLS V S + R + + Sbjct: 14 ADPAGAWAEGLANAFVRLDFEGPRGAPFAGVIDQADLGDLKLSRVRASAHGVWRRAEHAR 73 Query: 65 GSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRT 124 + + Q++G + Q R+ + D+ + D P ++ +E + I LPR Sbjct: 74 SARADLVFVNLQVAGVGVTAQGGRERRTAPFDLAVADTLAPFAIAHREPFELICAGLPRA 133 Query: 125 LLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPVL 184 L + + R A + +L NPA + T + AA + + LL Sbjct: 134 LAPPELMARGGVALSRTPAAREIARLLLG-CAGLALNPASTPTAAAAAARCFLDLLASAA 192 Query: 185 HQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQY 244 + P R V I N R+ L A G+S R + ++ A G + Sbjct: 193 DSLDE-APVRGLTAAHVRDYIGQNFRDATLSAARAARAFGVSERHIQKLLAGGGASFGET 251 Query: 245 IRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRR 298 + RL+ A AA +A I + GFSD S F FK RFG TP YR Sbjct: 252 LAGLRLEAAAQ--ALAAGGGSVAQIAYECGFSDLSTFHRAFKARFGETPAAYRA 303 >UniRef50_Q89J39 Transcriptional regulatory protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89J39_BRAJA Length = 351 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 63/307 (20%), Positives = 103/307 (33%), Gaps = 11/307 (3%) Query: 5 VDNEFQQWLSQINQVCGNFT--GRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQE 62 + W Q+ R G + + L + +S +RT + Sbjct: 39 PAIRARVWAECFEQIVTGMDMGFSEGDARIIGTHKFLMTETVALGEMFSSSFIGARTKKH 98 Query: 63 VKGSDDAWFYTVFQLSGQAIM-EQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLL 121 + D+ Y F + + Q R++ + G LL + ISL L Sbjct: 99 INRDDEDHVYLSFNIGATTHIGRQFGREIDVQPGQAGLLVLDASTQAIAPNNGHCISLKL 158 Query: 122 PRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPA-LSETESEAALQAMVCLL 180 P + ++ + LD QL + + N A L E + A Q ++ L Sbjct: 159 PNAIFREWGLSPVDLACRPLDCTGADYQLLTGYARLLIANGAGLDEGGAAEATQHLIKLT 218 Query: 181 RPVLHQRESVQPRR------ERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMF 234 L R+ VQ + V I + + E +A GM R++ M Sbjct: 219 GRWLGARDGVQGVDGEEAVYRARLALVRQTISKQAFDPEVSLERVARRLGMPSRTVQHML 278 Query: 235 ADKGLVVAQYIRNRRLDFCA-DAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTP 293 A G +Q + RL + D +A I FH GF D S F F+ + +TP Sbjct: 279 AKAGESFSQVVMAARLRRARVHLLDPVYADLSVADIAFHCGFLDVSSFYRAFRAAYNVTP 338 Query: 294 GEYRRKF 300 R + Sbjct: 339 KSLREQA 345 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.312 0.165 0.464 Lambda K H 0.267 0.0502 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,984,421,151 Number of Sequences: 3077464 Number of extensions: 98146926 Number of successful extensions: 440272 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 14894 Number of HSP's successfully gapped in prelim test: 5328 Number of HSP's that attempted gapping in prelim test: 379839 Number of HSP's gapped (non-prelim): 27189 length of query: 301 length of database: 1,040,396,356 effective HSP length: 128 effective length of query: 173 effective length of database: 646,480,964 effective search space: 111841206772 effective search space used: 111841206772 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.1 bits) S2: 93 (40.1 bits)