 |
| Job Description | Q47129 | | Confidence | 82.18% | Date | Thu Jan 5 12:36:13 GMT 2012 |
| Rank | 286 | Aligned Residues | 41 |
| % Identity | 15% | Template | c2zcmB_ |
| PDB info |
PDB header:transcription | Chain: B: PDB Molecule:biofilm operon icaabcd hth-type negative transcriptional |
PDBTitle: crystal structure of icar, a repressor of the tetr family
|
| Resolution | 1.33 Å |
|
|   |   |
193 | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . |
| Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
R | R | E | R | Q | F | Q | K | V | V | T | L | I | D | D | N | I | R | E | E | I | L | R | P | E | W | I | A | G | E | T | G | M | S | V | R | S | L | Y | R | M | F |
| Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|
|   |   |   |
|
|   |   |   |   |   |
|   |   |   |
|   |
|   |
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |
|   |   |
|
|   |
|
|   |   |
|   |   |   |   |
|   | . |   |   |   |
|
|   |   |
|
|   |   |
|
|
|
|   |   |
|
|
|   |   |
|
| Template Sequence |   |
X | K | D | K | I | I | D | N | A | I | T | L | F | S | E | K | G | Y | . |
D | G | T | T | L | D | D | I | S | K | S | V | N | I | K | K | A | S | L | Y | Y | H | Y |
| Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | . | T | T |
|
|  |  |  |  |  |  |  | T | T |
|
| G | G | G | G | G | G | T |
|
| Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | |
. | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|