Job Description P69826 Confidence 24.86% Date Thu Jan 5 12:12:09 GMT 2012 Rank 103 Aligned Residues 111 % Identity 14% Template c3lvuB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:abc transporter, periplasmic substrate-binding protein; PDBTitle: crystal structure of abc transporter, periplasmic substrate-binding2 protein spo2066 from silicibacter pomeroyi Resolution 1.79 Å

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		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.						.	.	.	.	.	.
Predicted Secondary structure																																																																							.	.	.	.	.
Query SS confidence																																																																							.	.	.	.	.
Query Sequence		E	S	E	D	E	F	A	Q	S	A	N	A	V	K	A	M	K	Q	E	G	A	F	S	L	S	R	V	K	R	I	A	F	V	C	D	A	G	M	G	S	S	A	M	G	A	T	T	F	R	K	R	L	E	K	A	G	L	A	I	E	V	K	H	Y	A	I	E	N	V	.	.	.	.	.	P	A	D	A	D	I
Query Conservation																																																																							.	.	.	.	.
Alig confidence																																													.																										.	.	.	.	.
Template Conservation																																													.
Template Sequence		R	R	A	A	Q	F	L	E	Q	A	G	F	R	I	E	Q	G	Q	L	L	G	P	D	G	A	P	L	A	L	R	F	L	L	R	Q	G	D	S	D	X	Q	T	V	.	L	E	I	Y	T	R	A	L	E	R	L	G	I	A	A	Q	I	E	K	V	D	N	A	Q	Y	T	A	R	V	A	E	L	D	F	D	L
Template Known Secondary structure											T	T					T	T					T	T	S	S	B									T	T								.											T	T																			T	T			S
Template Predicted Secondary structure																																													.
Template SS confidence
		412	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.		.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
		419	420	.												.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.			.	.	.	.	450	.	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.																									.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.																									.	.
Query Sequence		V	V	T	.	.	.	.	.	.	.	.	.	.	.	H	A	S	L	E	G	R	V	K	R	V	T	D	K	P	L	I	L	I	N	N	Y	I	G	.	.	D	P	K	L	D	T	L	F	N	Q	L	T	A	E
Query Conservation					.	.	.	.	.	.	.	.	.	.	.																									.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.																.	.	.	.						.	.
Template Conservation																															.	.	.	.
Template Sequence		T	P	F	R	R	D	L	S	L	S	P	G	N	E	Q	R	L	Y	W	G	S	H	S	A	G	Q	P	G	T	.	.	.	.	R	N	L	X	G	A	A	S	P	A	I	D	A	X	I	D	R	X	L	A	A
Template Known Secondary structure										S	S			T								G	G	G	T	T		T	T		.	.	.	.	S		T	T
Template Predicted Secondary structure																															.	.	.	.
Template SS confidence
		491	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.					520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions