Phyre 2 alignment of Q46833 with d1uv7a_

Return to main results | Retrieve Phyre Job Id

Job Description | Q46833
Confidence | 78.83% | Date | Thu Jan 5 12:34:58 GMT 2012
Rank | 4 | Aligned Residues | 56
% Identity | 11% | Template | d1uv7a_
SCOP info | RRF/tRNA synthetase additional domain-like | General secretion pathway protein M, EpsM | General secretion pathway protein M, EpsM
Resolution | 1.7

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 228 | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . |  |  | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . |  | 280 | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |
Query Sequence |  | M | R | G | F | T | F | D | Q | K | R | Q | I | L | H | L | Q | L | R | A | A | N | F | A | S | F | D | K | L | R | S | V | L | A | T | . | . | D | Y | V | V | Q | Q | D | A | L | Q | K | E | G | D | A | V | S | G | . | G | V | T | L | R | R
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  | . |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | I | E | L | I | R | V | Q | P | R | G | E | X | X | Q | V | W | I | Q | P | L | P | F | S | Q | L | V | S | W | I | A | Y | L | Q | E | R | Q | G | V | S | V | D | A | I | D | I | D | R | . | . | G | V | V | E | V | K | R | L | Q | L | K | R
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  | S | S |  |  |  |  |  |  |  |  | B |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 101 | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . |  |  | . | . | 150 | . | . | . | . | . | . | . | . | .

Download: | Text version | FASTA pairwise alignment | 3D Model in PDB format

View in Jmol

|  | Close Jmol

Send structure to FirstGlance for more viewing options

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions