Phyre 2 alignment of Q46833 with c2k6xA_

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Job Description | Q46833
Confidence | 2.74% | Date | Thu Jan 5 12:34:58 GMT 2012
Rank | 77 | Aligned Residues | 26
% Identity | 19% | Template | c2k6xA_
PDB info | PDB header:transcription | Chain: A: PDB Molecule:rna polymerase sigma factor rpod; | PDBTitle: autoregulation of a group 1 bacterial sigma factor involves2 the formation of a region 1.1- induced compacted structure
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Query Sequence |  | I | H | Q | Q | H | M | R | N | I | A | Q | W | L | Q | E | N | G | I | T | R | A | T | V | A | P | D
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Template Sequence |  | F | D | T | N | L | I | E | R | I | H | E | E | L | E | K | H | G | I | N | I | V | E | N | E | P | E
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |  |  |  |  | B |  |  | S |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 64 | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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