Phyre 2 alignment of Q46833 with d1j5ya2

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Job Description | Q46833
Confidence | 13.15% | Date | Thu Jan 5 12:34:58 GMT 2012
Rank | 20 | Aligned Residues | 25
% Identity | 8% | Template | d1j5ya2
SCOP info | HPr-like | Putative transcriptional regulator TM1602, C-terminal domain | Putative transcriptional regulator TM1602, C-terminal domain
Resolution | 2.30

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 243 | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . |  | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |
Query Sequence |  | Q | L | R | A | A | N | F | A | S | F | D | K | L | R | S | V | L | A | T | . | D | Y | V | V | Q | Q
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | T | I | E | A | P | D | E | E | T | X | E | R | I | X | R | E | L | K | K | K | G | F | L | I | E | E
Template Known Secondary structure |  |  |  |  |  | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  | B |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 149 | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | .

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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