Phyre 2 alignment of Q46833 with d1je3a_

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Job Description | Q46833
Confidence | 9.18% | Date | Thu Jan 5 12:34:58 GMT 2012
Rank | 29 | Aligned Residues | 41
% Identity | 15% | Template | d1je3a_
SCOP info | IF3-like | SirA-like | SirA-like
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 241 | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . |  | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | H | L | Q | L | R | A | A | N | F | A | S | F | D | K | L | R | S | V | L | A | T | . | D | Y | V | V | Q | Q | D | A | L | Q | K | E | G | D | A | V | S | G | G | V | T | L | R | R
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |
Template Sequence |  | I | L | E | V | V | S | D | C | P | Q | S | I | N | N | I | P | L | D | A | R | N | H | G | Y | T | V | L | . | . | D | I | Q | Q | D | G | P | T | I | . | . | R | Y | L | I | Q | K
Template Known Secondary structure |  |  |  |  |  |  |  | B |  | S | S | S | S |  |  |  |  |  |  |  |  |  |  | T |  | S |  |  | . | . |  |  |  |  |  | S | S | S |  | . | . |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 56 | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . |  |  | . | . | . | . | . | . | . | 90 | . |  |  | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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