Phyre 2 alignment of Q46833 with c1j5yA_

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Job Description | Q46833
Confidence | 3.10% | Date | Thu Jan 5 12:34:58 GMT 2012
Rank | 69 | Aligned Residues | 24
% Identity | 8% | Template | c1j5yA_
PDB info | PDB header:transcription | Chain: A: PDB Molecule:transcriptional regulator, biotin repressor family; | PDBTitle: crystal structure of transcriptional regulator (tm1602) from2 thermotoga maritima at 2.3 a resolution
Resolution | 2.30 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 243 | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . |  | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |
Query Sequence |  | Q | L | R | A | A | N | F | A | S | F | D | K | L | R | S | V | L | A | T | . | D | Y | V | V | Q
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | T | I | E | A | P | D | E | E | T | X | E | R | I | X | R | E | L | K | K | K | G | F | L | I | E
Template Known Secondary structure |  |  |  |  |  | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  | B |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 149 | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | .

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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