Phyre 2 alignment of Q46833 with d2p5ka1

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Job Description | Q46833
Confidence | 3.33% | Date | Thu Jan 5 12:34:58 GMT 2012
Rank | 64 | Aligned Residues | 21
% Identity | 29% | Template | d2p5ka1
SCOP info | DNA/RNA-binding 3-helical bundle | "Winged helix" DNA-binding domain | Arginine repressor (ArgR), N-terminal DNA-binding domain
Resolution | 1.00

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 253 | . | . | . | . | . | . | 260 | . |  | . | . | . | . | . | . | . | . | 270 | . | . | .
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Query Sequence |  | D | K | L | R | S | V | L | A | T | . | D | Y | V | V | Q | Q | D | A | L | Q | K | E
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Template Sequence |  | D | E | L | V | D | M | L | K | Q | D | G | Y | K | V | T | Q | A | T | V | S | R | D
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 23 | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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