Phyre 2 alignment of P0C960 with c3jzaB_

Return to main results | Retrieve Phyre Job Id

Job Description | P0C960
Confidence | 4.03% | Date | Thu Jan 5 11:30:08 GMT 2012
Rank | 58 | Aligned Residues | 11
% Identity | 27% | Template | c3jzaB_
PDB info | PDB header:transport protein | Chain: B: PDB Molecule:uncharacterized protein drra; | PDBTitle: crystal structure of human rab1b in complex with the gef domain of2 drra/sidm from legionella pneumophila
Resolution | 1.80 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 78 | . | 80 | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | I | G | L | M | Q | L | K | A | S | T | S
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | V | G | I | M | Q | F | I | K | D | V | A
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  | S
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |
|  | 469 | 470 | . | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions