Phyre 2 alignment of P0C960 with d2coba1

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Job Description | P0C960
Confidence | 15.04% | Date | Thu Jan 5 11:30:08 GMT 2012
Rank | 41 | Aligned Residues | 24
% Identity | 17% | Template | d2coba1
SCOP info | DNA/RNA-binding 3-helical bundle | Homeodomain-like | Psq domain
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Query Sequence |  | S | Q | K | A | G | A | A | W | G | V | D | P | Q | L | I | T | A | I | I | A | I | E | S | G
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Template Sequence |  | V | S | K | A | Q | S | I | Y | G | I | P | H | S | T | L | E | Y | K | V | K | E | R | L | G
Template Known Secondary structure |  |  |  |  |  |  |  |  |  | T |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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