16/01/2012 07:37:48 : INFO  : Run start: Mon Jan 16 07:37:46 GMT 2012
16/01/2012 07:37:57 : INFO  : Initialised job
16/01/2012 07:38:01 : INFO  : Renaming log file 'phyre2_20120116_073745.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/67b2e1c85b2cb0ac/phyre_20120116_073745.log'
16/01/2012 07:38:03 : INFO  : Initialised job:
Sequence
>batch____
MKLRWFAFLIVLLAGCSSKHDYTNPPWNAKVPVQRAMQWMPISQKAGAAWGVDPQLITAI
IAIESGGNPNAVSKSNAIGLMQLKASTSGRDVYRRMGWSGEPTTSELKNPERNISMGAAY
LNILETGPLAGIEDPKVLQYALVVSYANGAGALLRTFSSDRKKAISKINDLDADEFLEHV
ARNHPAPQAPRYIYKLEQALDAM

16/01/2012 07:38:06 : INFO  : Checked sequence
16/01/2012 07:38:11 : INFO  : Finding homologues with PSI-BLAST
16/01/2012 07:38:13 : INFO  : PSI-BLAST 3 iterations
16/01/2012 07:39:42 : INFO  : PSI-BLAST 5 iterations
16/01/2012 07:41:33 : INFO  : Finished PSI-BLAST
16/01/2012 07:41:36 : INFO  : Running Buildali to generate a3m file
16/01/2012 07:52:12 : INFO  : Converting to HMM
16/01/2012 07:52:16 : INFO  : Calibrating HMM
16/01/2012 07:52:33 : INFO  : Searching HMM database
16/01/2012 07:56:32 : INFO  : Finished buildali
16/01/2012 07:56:34 : INFO  : Predicting secondary structure
16/01/2012 07:56:46 : INFO  : Predicted secondary structure (PSI-Pred)
16/01/2012 07:56:49 : INFO  : Predicting Disordered regions
16/01/2012 07:56:55 : INFO  : Predicted Disorder (Disopred)
16/01/2012 07:57:01 : INFO  : Running memsat_svm check
16/01/2012 08:01:47 : INFO  : Running memsat_svm full
16/01/2012 08:10:33 : INFO  : Predicted Transmembrane (memsat_svm) ID '67b2e1c85b2cb0ac'
16/01/2012 08:10:36 : INFO  : Initialising fold library search
16/01/2012 08:10:41 : INFO  : Initialised search input
16/01/2012 08:10:45 : INFO  : Building Ensemble models
16/01/2012 08:10:51 : INFO  : Building hh.c2y8pA_.model.1.pdb
16/01/2012 08:11:16 : INFO  : Building c2y8pA_.1.pdb
16/01/2012 08:11:41 : INFO  : Building c1slyA_.2.pdb
16/01/2012 08:12:06 : INFO  : Building d1qsaa2.3.pdb
16/01/2012 08:12:32 : INFO  : Building c3mgwA_.4.pdb
16/01/2012 08:12:57 : INFO  : Building d1gbsa_.5.pdb
16/01/2012 08:13:23 : INFO  : Building c3gxkB_.6.pdb
16/01/2012 08:13:48 : INFO  : Building d1qusa_.7.pdb
16/01/2012 08:14:14 : INFO  : Building c3bkhA_.8.pdb
16/01/2012 08:14:41 : INFO  : Building c1xsfA_.9.pdb
16/01/2012 08:15:07 : INFO  : Building d1xsfa1.10.pdb
16/01/2012 08:15:33 : INFO  : Building c3eo5A_.11.pdb
16/01/2012 08:15:59 : INFO  : Building c2fbdB_.12.pdb
16/01/2012 08:16:27 : INFO  : Building d1gd6a_.13.pdb
16/01/2012 08:16:53 : INFO  : Building d1iiza_.14.pdb
16/01/2012 08:17:19 : INFO  : Building d1hhla_.15.pdb
16/01/2012 08:17:46 : INFO  : Building d2vb1a1.16.pdb
16/01/2012 08:18:14 : INFO  : Building d1ghla_.17.pdb
16/01/2012 08:18:43 : INFO  : Building c3fi7A_.18.pdb
16/01/2012 08:19:11 : INFO  : Building c2zycA_.19.pdb
16/01/2012 08:19:36 : INFO  : Building d1jsea_.20.pdb
16/01/2012 08:20:31 : INFO  : Finished HH model building
16/01/2012 08:20:34 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
16/01/2012 08:21:42 : INFO  : html domain output complete ID '67b2e1c85b2cb0ac'
16/01/2012 08:35:54 : INFO  : Run end  : Mon Jan 16 08:35:52 GMT 2012
