38 c3pvsA_ Probab=99.66   E-value=4.4e-15  Score=108.78  Aligned_columns=208  Identities=29%

Q ss_pred             HHCCEECHHHHHHH---HHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCC
Q ss_conf             50130386999999---999997578887654320256688707973597888889999999871898899761100123
Q batch____        13 LDKHIIGQDNAKRS---VAIALRNRWRRMQLNEELRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEV   89 (443)
Q Consensus        13 L~k~ViGQ~~Akk~---va~ai~~h~~r~~~~~~~~~~~~p~~iLl~GPpGtGKT~lAkalA~~l~vpfv~~d~s~~~e~   89 (443)
                      |+. ||||++++..   +..++              ....+.++||+||||||||++|+++|+.++.+|+.+|++.....
T Consensus        12 l~d-ivGq~~~~~~~~~L~~~i--------------~~~~~~slIL~GppGtGKTtlA~~iA~~~~~~fi~ina~~~~v~   76 (414)
T c3pvsA_          12 LAQ-YIGQQHLLAAGKPLPRAI--------------EAGHLHSMILWGPPGTGKTTLAEVIARYANADVERISAVTSGVK   76 (414)
T ss_dssp             TTT-CCSCHHHHSTTSHHHHHH--------------HHTCCCEEEEECSTTSSHHHHHHHHHHHTTCEEEEEETTTCCHH
T ss_pred             HHH-HCCHHHHHHHHHHHHHHH--------------HCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCHH
T ss_conf             756-108299998899999999--------------75999849997698898899999999971998999975447989


Q ss_pred             CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCHHHHHHHHCCCCC
Q ss_conf             31353189999999984100340367777677777899999999860017776665553000111011346543104420
Q batch____        90 GYVGKEVDSIIRDLTDAAVKMVRVQAIEKNRYRAEELAEERILDVLIPPAKNNWGQTEQQQEPSAARQAFRKKLREGQLD  169 (443)
Q Consensus        90 gyvG~~~~~~~r~l~~~a~~~~~~~~~~~~~d~~~~~~~~~~~~~ll~~~~g~~~~~~~~~~~~~~~~~~~~~lr~g~l~  169 (443)
                           +..+.+...........+.++|+|+++.+                                  ..+..+..+.+-
T Consensus        77 -----~ir~ii~~a~~~~~~~~~~ILfIDEi~rl----------------------------------aLL~~lE~~~ii  117 (414)
T c3pvsA_          77 -----EIREAIERARQNRNAGRRTILFVDEVHRF----------------------------------AFLPHIEDGTIT  117 (414)
T ss_dssp             -----HHHHHHHHHHHHHHTTCCEEEEEETTTCC----------------------------------CCHHHHHTTSCE
T ss_pred             -----HHHHHHHHHHHHHHCCCCCEEEEECHHHH----------------------------------HHHHHHHCCCEE
T ss_conf             -----99999999875111258808998413576----------------------------------657875449848


Q ss_pred             EEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf             14577642685433102577644220235788654226776554031189899999876346651700135777522331
Q batch____       170 DKEIEIDLAAAPMGVEIMAPPGMEEMTSQLQSMFQNLGGQKQKARKLKIKDAMKLLIEEEAAKLVNPEELKQDAIDAVEQ  249 (443)
Q Consensus       170 ~~ei~v~~p~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  249 (443)
                      -+-.+-..|...                                                                    
T Consensus       118 lI~aTten~~~~--------------------------------------------------------------------  129 (414)
T c3pvsA_         118 FIGATTENPSFE--------------------------------------------------------------------  129 (414)
T ss_dssp             EEEEESSCGGGS--------------------------------------------------------------------
T ss_pred             EEEEECCCCHHH--------------------------------------------------------------------
T ss_conf             999826760441--------------------------------------------------------------------


Q ss_pred             CCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHCCCCEE
Q ss_conf             68665523555421135664321000012334442032111011234552013456642003445406868885111002
Q batch____       250 HGIVFIDEIDKICKRGESSGPDVSREGVQRDLLPLVEGCTVSTKHGMVKTDHILFIASGAFQIAKPSDLIPELQGRLPIR  329 (443)
Q Consensus       250 ~g~~~~de~dki~~~~~~~~~~v~~~~v~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pEl~gRi~~i  329 (443)
                                                                                          +.|.|+.|+.+ 
T Consensus       130 --------------------------------------------------------------------i~~aL~SR~~v-  140 (414)
T c3pvsA_         130 --------------------------------------------------------------------LNSALLSRARV-  140 (414)
T ss_dssp             --------------------------------------------------------------------SCHHHHTTEEE-
T ss_pred             --------------------------------------------------------------------CCHHHHHHEEE-
T ss_conf             --------------------------------------------------------------------69888830006-


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             00211799999999988889999999999653598699979999999983222001212457146899999999999863
Q batch____       330 VELQALTTSDFERILTEPNASITVQYKALMATEGVNIEFTDSGIKRIAEAAWQVNESTENIGARRLHTVLERLMEEISYD  409 (443)
Q Consensus       330 v~~~~L~~~~l~~Il~~~~~~l~~~~~~~~~~~gv~l~~t~~a~~~ia~~a~~~~~~~~~~GaR~L~~~ie~~l~~~~~~  409 (443)
                      +.|.+++.+++..|+.......      ........+.++++++++|++.+-         |  -+|..+ ..|+-+..-
T Consensus       141 i~l~~ls~edi~~il~~~l~~~------~~~~~~~~i~i~d~al~~Ia~~s~---------G--D~R~aL-n~LE~a~~~  202 (414)
T c3pvsA_         141 YLLKSLSTEDIEQVLTQAMEDK------TRGYGGQDIVLPDETRRAIAELVN---------G--DARRAL-NTLEMMADM  202 (414)
T ss_dssp             EECCCCCHHHHHHHHHHHHHCT------TTSSTTSSEECCHHHHHHHHHHHC---------S--CHHHHH-HHHHHHHHH
T ss_pred             EEECCCCHHHHHHHHHHHHHHH------HHHHCCCCCCCCHHHHHHHHHHCC---------C--CHHHHH-HHHHHHHHH
T ss_conf             7716899899999999999999------987087898669899999998579---------9--989999-999999995


Q ss_pred             CCCCCCCEEEECHHHHHHHH
Q ss_conf             30158879998399999999
Q batch____       410 ASDLSGQNITIDADYVSKHL  429 (443)
Q Consensus       410 ~~~~~~~~v~i~~~~v~~~~  429 (443)
                      +.........++.+.+++..
T Consensus       203 a~~~~~~~~~i~~~~v~~~~  222 (414)
T c3pvsA_         203 AEVDDSGKRVLKPELLTEIA  222 (414)
T ss_dssp             SCBCTTSCEECCHHHHHHHH
T ss_pred             CCCCCCCHHHCCHHHHHHHH
T ss_conf             14667665548999999986