200 c3dm5A_ Probab=97.73   E-value=0.00017  Score=45.66  Aligned_columns=110  Identities=16%

Q ss_pred             HHHHHHHHCCEEC---------HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHC---
Q ss_conf             9999985013038---------6999999999997578887654320256688707973597888889999999871---
Q batch____         7 REIVSELDKHIIG---------QDNAKRSVAIALRNRWRRMQLNEELRHEVTPKNILMIGPTGVGKTEIARRLAKLA---   74 (443)
Q Consensus         7 ~~i~~~L~k~ViG---------Q~~Akk~va~ai~~h~~r~~~~~~~~~~~~p~~iLl~GPpGtGKT~lAkalA~~l---   74 (443)
                      +++.+.+.+.+.|         ++...+.|-..+.+..  -.....+.....|.-|+|+||+|+|||+.+=-||..+   
T Consensus        50 ~~~~~~ik~~~~~~~~~~~~~~~~~i~~~v~~eL~~~l--~~~~~~~~~~~~p~vI~~vG~~G~GKTTT~aKLA~~~~~~  127 (416)
T c3dm5A_          50 LQLTREIQRRALEEKPPAGISKKEHIIKIVYEELTKFL--GTEAKPIEIKEKPTILLMVGIQGSGKTTTVAKLARYFQKR  127 (416)
T ss_dssp             HHHHHHHHHHHHHCCCCTTCCHHHHHHHHHHHHHHHHT--TSSCCCCCCCSSSEEEEEECCTTSSHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH--CCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHC
T ss_conf             99999999996202257789989999999999999861--7764333346896499997058877346899999999956


Q ss_pred             CCCEEEEECCCC------------------CCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHH
Q ss_conf             898899761100------------------12331353189999999984100340367777
Q batch____        75 NAPFIKVEATKF------------------TEVGYVGKEVDSIIRDLTDAAVKMVRVQAIEK  118 (443)
Q Consensus        75 ~vpfv~~d~s~~------------------~e~gyvG~~~~~~~r~l~~~a~~~~~~~~~~~  118 (443)
                      |.....+.|-.|                  .-..+.+.+.....++....+.....-.+++|
T Consensus       128 g~kv~li~aDt~R~aA~eQL~~~a~~~~vp~~~~~~~~d~~~i~~~ai~~~~~~~~DvIlID  189 (416)
T c3dm5A_         128 GYKVGVVCSDTWRPGAYHQLRQLLDRYHIEVFGNPQEKDAIKLAKEGVDYFKSKGVDIIIVD  189 (416)
T ss_dssp             TCCEEEEECCCSSTHHHHHHHHHHGGGTCEEECCTTCCCHHHHHHHHHHHHHHTTCSEEEEE
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEE
T ss_conf             99189996188670169999999886099158548857889999999999996799899981