88 c1ny5A_ Probab=98.63   E-value=5.6e-07  Score=60.43  Aligned_columns=159  Identities=17%

Q ss_pred             HHHHHHHHCCEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHC---CCCEEEEEC
Q ss_conf             99999850130386999999999997578887654320256688707973597888889999999871---898899761
Q batch____         7 REIVSELDKHIIGQDNAKRSVAIALRNRWRRMQLNEELRHEVTPKNILMIGPTGVGKTEIARRLAKLA---NAPFIKVEA   83 (443)
Q Consensus         7 ~~i~~~L~k~ViGQ~~Akk~va~ai~~h~~r~~~~~~~~~~~~p~~iLl~GPpGtGKT~lAkalA~~l---~vpfv~~d~   83 (443)
                      +.-.......++|+..+.+.+...++            +-......+|+.|++||||+++|+++....   +.||+.+||
T Consensus       129 ~~~~~~~~~~lig~S~~m~~l~~~i~------------~~A~~~~~vli~Ge~GtGK~~~A~~iH~~s~~~~~~fi~v~c  196 (384)
T c1ny5A_         129 RREKDLKEEEYVFESPKMKEILEKIK------------KISCAECPVLITGESGVGKEVVARLIHKLSDRSKEPFVALNV  196 (384)
T ss_dssp             HHHHHTTCCCCCCCSHHHHHHHHHHH------------HHTTCCSCEEEECSTTSSHHHHHHHHHHHSTTTTSCEEEEET
T ss_pred             CCCCCCCCCCCCCCCHHHHHHHHHHH------------HCCCCCCCCEECCCCCCCHHHHHHHHHHCCCCCCCCEEEEEC
T ss_conf             22222222222221013554322221------------023445320004666673899999977316314876699523


Q ss_pred             CCCCCCCCCCCCHHHHHHHHH-------------------HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf             100123313531899999999-------------------8410034036777767777789999999986001777666
Q batch____        84 TKFTEVGYVGKEVDSIIRDLT-------------------DAAVKMVRVQAIEKNRYRAEELAEERILDVLIPPAKNNWG  144 (443)
Q Consensus        84 s~~~e~gyvG~~~~~~~r~l~-------------------~~a~~~~~~~~~~~~~d~~~~~~~~~~~~~ll~~~~g~~~  144 (443)
                      +.+++.        ..-..+|                   .+.++..........-.+......+.+-++-.....+...
T Consensus       197 ~~~~~~--------~~~~~lfg~~~~~~~~~~~~~~g~~~~a~~gTL~l~~i~~l~~~~Q~~L~~~l~~~~~~~~~~~~~  268 (384)
T c1ny5A_         197 ASIPRD--------IFEAELFGYEKGAFTGAVSSKEGFFELADGGTLFLDEIGELSLEAQAKLLRVIESGKFYRLGGRKE  268 (384)
T ss_dssp             TTSCHH--------HHHHHHHCBCTTSSTTCCSCBCCHHHHTTTSEEEEESGGGCCHHHHHHHHHHHHHSEECCBTCCSC
T ss_pred             CCCCHH--------HHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCEEEEECHHHCCHHHHHHHHHHHHCCCEEECCCCCC
T ss_conf             328977--------865664052235666652123462530369859995357889999999999973393767789880


Q ss_pred             CCCCEEECCCCCHHHHHHHHCCCCCEE------EEEEECCCCCCCCC
Q ss_conf             555300011101134654310442014------57764268543310
Q batch____       145 QTEQQQEPSAARQAFRKKLREGQLDDK------EIEIDLAAAPMGVE  185 (443)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~lr~g~l~~~------ei~v~~p~~~~~~~  185 (443)
                      ....+...+++..+..+.++.|.|...      .+.+.+|.-..|..
T Consensus       269 ~~~~~rii~~s~~~l~~l~~~~~f~~~L~~~l~~~~i~vPpLreR~~  315 (384)
T c1ny5A_         269 IEVNVRILAATNRNIKELVKEGKFREDLYYRLGVIEIEIPPLRERKE  315 (384)
T ss_dssp             EECCCEEEEEESSCHHHHHHTTSSCHHHHHHHTTEEEECCCGGGCHH
T ss_pred             CCCCEEEEECCCCCHHHHHHCCCCCHHHHHHCCEEEEEECCCCCCHH
T ss_conf             14660685147789789998789765789841835997287343822