246 c3fluD_ Probab=96.97   E-value=0.027  Score=33.09  Aligned_columns=189  Identities=17%

Q ss_pred             HHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHCC-CCEEEECCCCCCHHHHHHHHHHHHHCCCCEEECCCCCHHC
Q ss_conf             665552000122010001233789999999998545449-7479940468999999999988875388801047872000
Q batch____        62 DHLVKEDTGFIGFKNMEQIAEHPLEENLAALRRLKEDYP-DKVLIASIMGENEQQWEELARLVQEAGADMIECNFSCPQM  140 (411)
Q Consensus        62 ~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~si~g~~~~~~~~~~~~~~~~~ad~ieln~s~p~~  140 (411)
                      +....+........+++.....+.+|+.+.++....... ..++++.+.+.+.++..+.++.+++.|+|++-+--..-..
T Consensus        32 ~l~~~Gv~gi~~~G~tGE~~~Ls~~Er~~i~~~~~~~~~~~~~vi~gv~~~~~~~~i~~a~~a~~~Gad~v~~~pP~~~~  111 (293)
T c3fluD_          32 WHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTGANNTVEAIALSQAAEKAGADYTLSVVPYYNK  111 (293)
T ss_dssp             HHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCSSC
T ss_pred             HHHHCCCCEEEECCCCCCHHHCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCC
T ss_conf             99977998999877235702179999999999999960899739996588999999999999985499899993887889


Q ss_pred             CCCCCCHHHHCCHHHHHHHHHHHHHCCCCCCEEEECCCCCC----HHHHHHHHHHCCCCEEEEECCCCCCCCEEECCCCC
Q ss_conf             57764203206989999999999733687720342088220----79999999975998999956878753201124332
Q batch____       141 TSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKMTPNIGD----MCEVALAAKRGGADGIAAINTVKSITNIDLNQKIG  216 (411)
Q Consensus       141 ~~~~~g~~~~~~~~~~~~i~~~v~~~~~~pv~vKl~p~~~~----~~~ia~~l~~~GadgI~~~nt~~~~~~~~i~~~~~  216 (411)
                      .          +.+.+.+..+.+.+.+++|+++--.|..+.    ...+.++++--.+-|+.-+..              
T Consensus       112 ~----------s~~~i~~~~~~ia~~~~~pi~~Yn~P~~tg~~~s~~~~~~L~~~~~v~giK~s~~--------------  167 (293)
T c3fluD_         112 P----------SQEGIYQHFKTIAEATSIPMIIYNVPGRTVVSMTNDTILRLAEIPNIVGVKEASG--------------  167 (293)
T ss_dssp             C----------CHHHHHHHHHHHHHTCCSCEEEEECHHHHSSCCCHHHHHHHTTSTTEEEEEECSC--------------
T ss_pred             C----------CHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCEEEEECCCC--------------
T ss_conf             9----------9889999999999754998999967533367759899999834798889963889--------------


Q ss_pred             CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEEEHHHHHCCCHHHHHH
Q ss_conf             22446533315213721135679999999985177882799988889999999998479875899417762480258999
Q batch____       217 MPIVNGKSSISGYSGKAVKPIALRFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYRIVEDM  296 (411)
Q Consensus       217 ~~~~~~~~~~gg~SG~~l~p~al~~v~~i~~~~~~~~ipIi~~GGI~~~~Dv~~~l~aGA~~Vqv~Ta~~~~G~~~~~~i  296 (411)
                                           ......++.+... +++.+.....    ..+...+.+|++....+++.+  -|+.+.++
T Consensus       168 ---------------------d~~~~~~l~~~~~-~~~~v~~G~d----~~~~~~l~~G~~G~~~~~~n~--~P~~~~~~  219 (293)
T c3fluD_         168 ---------------------NIGSNIELINRAP-EGFVVLSGDD----HTALPFMLCGGHGVITVAANA--APKLFADM  219 (293)
T ss_dssp             ---------------------CHHHHHHHHHHSC-TTCEEEECCG----GGHHHHHHTTCCEEEESGGGT--CHHHHHHH
T ss_pred             ---------------------CHHHHHHHHHHCC-CCEEEEECCH----HHHHHHHHHCCCCHHHHHHHH--HHHHHHHH
T ss_conf             ---------------------9899999998639-9879994877----999999983774128989988--69999999


Q ss_pred             HHHHHH
Q ss_conf             999999
Q batch____       297 ASGLSH  302 (411)
Q Consensus       297 ~~~L~~  302 (411)
                      .+-+.+
T Consensus       220 ~~a~~~  225 (293)
T c3fluD_         220 CRAALQ  225 (293)
T ss_dssp             HHHHHH
T ss_pred             HHHHHC
T ss_conf             999986