BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (239 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P17976 Protein psiA n=71 Tax=root RepID=PSIA2_ECOLX 473 e-132 UniRef50_B5MTY0 Plasmid SOS inhibition protein A n=2 Tax=Salmone... 245 1e-63 UniRef50_A7M7G4 PsiA n=1 Tax=Serratia entomophila RepID=A7M7G4_9... 148 1e-34 UniRef50_A6TIS0 Plasmid SOS inhibition n=10 Tax=Enterobacteriace... 144 2e-33 UniRef50_D1S159 Protein PsiA n=1 Tax=Serratia odorifera 4Rx13 Re... 134 4e-30 UniRef50_B5RKA5 Putative PsiA protein n=1 Tax=Klebsiella pneumon... 81 3e-14 UniRef50_Q8L256 Putative uncharacterized protein orf289 n=2 Tax=... 49 1e-04 >UniRef50_P17976 Protein psiA n=71 Tax=root RepID=PSIA2_ECOLX Length = 239 Score = 473 bits (1217), Expect = e-132, Method: Compositional matrix adjust. Identities = 233/239 (97%), Positives = 234/239 (97%) Query: 1 MSVRSQALVPLSTEQQAAWRAVAETEKRRHQGNTLAEYPYAGAFFRCLNGSRRISLSDLR 60 MS RSQALVPLS EQQAAWRAVAETEKRRHQGNTLAEYPYAGAFFRCLNGSRRISLSDLR Sbjct: 1 MSARSQALVPLSAEQQAAWRAVAETEKRRHQGNTLAEYPYAGAFFRCLNGSRRISLSDLR 60 Query: 61 FFMPSLTAEELHGNRLQWLYAIDVLIETQGEVCLLPLPGDAAERLFPSVRFRVRERSRHK 120 FFMPSLTAEEL GNR QWLYA+DVLIETQGEVCLLPLPGDAAERLFPSVRFRVRERSRHK Sbjct: 61 FFMPSLTAEELRGNRSQWLYAVDVLIETQGEVCLLPLPGDAAERLFPSVRFRVRERSRHK 120 Query: 121 SALVMQKYSRQQAREAEQKARAYQALVAQAEIELAFHSPETVGSWHARWSDRVAEHDLET 180 SALVMQKYSRQQAREAEQKARAYQALVAQAEIELAFHSPETVGSWHARWSDRVAEHDLET Sbjct: 121 SALVMQKYSRQQAREAEQKARAYQALVAQAEIELAFHSPETVGSWHARWSDRVAEHDLET 180 Query: 181 LFWQWGERFPSLAGMERWQWQDMPFWQVIAEASLAAREAGHAVREMERWMVPNKLREAA 239 LFWQWGERFPSLAGMERWQWQDMPFWQVIAE SLAAREAGHAVREMERWMVPNKLREAA Sbjct: 181 LFWQWGERFPSLAGMERWQWQDMPFWQVIAERSLAAREAGHAVREMERWMVPNKLREAA 239 >UniRef50_B5MTY0 Plasmid SOS inhibition protein A n=2 Tax=Salmonella enterica subsp. enterica RepID=B5MTY0_SALET Length = 242 Score = 245 bits (625), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 119/230 (51%), Positives = 164/230 (71%), Gaps = 1/230 (0%) Query: 7 ALVPLSTEQQAAWRAVAETEKRRHQGNTLAEYPYAGAFFRCLNGSRRISLSDLRFFMPSL 66 +L+PLS E++AA +A+AE EK+ +G +AE+ YA AFFR LNGS+R+++ D+ +F P + Sbjct: 7 SLIPLSHERRAAMQAIAEVEKKYERGVHIAEFAYAHAFFRILNGSKRVTVKDIGWFSPGM 66 Query: 67 TAEELHGNRLQWLYAIDVLIETQGEVCLLPLPGDAAERLFPSVRFRVRERSRHKSALVMQ 126 TA+ L G + WL AID LIE++G C LPL RLFP +F++ ER R ++ L + Sbjct: 67 TAQNLRGKKQAWLAAIDRLIESRGACCWLPLSVSDGWRLFPETKFQMSERRRRQNELCAE 126 Query: 127 KYSRQQAREAEQKARAYQALVAQAEIELAFHSPETVGSWHARWS-DRVAEHDLETLFWQW 185 KY+RQ+ +EA Q+ AYQAL QAEI+LAFH+PETV SW ARWS + + DLE +FW+W Sbjct: 127 KYTRQRRKEACQRESAYQALAGQAEIDLAFHTPETVSSWSARWSGTELRQCDLEDMFWRW 186 Query: 186 GERFPSLAGMERWQWQDMPFWQVIAEASLAAREAGHAVREMERWMVPNKL 235 ERFPSL MERW + PFW V+ E+ A+E+ +VR++ERWMVPNKL Sbjct: 187 SERFPSLEPMERWMMANQPFWSVMVESDALAKESPESVRQLERWMVPNKL 236 >UniRef50_A7M7G4 PsiA n=1 Tax=Serratia entomophila RepID=A7M7G4_9ENTR Length = 242 Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 97/238 (40%), Positives = 137/238 (57%), Gaps = 3/238 (1%) Query: 1 MSVRSQALVPLSTEQQAAWRAVAETEKRRHQGNTLAEYPYAGAFFRCLNGSR-RISLSDL 59 M ++ALVP++ QQAA AV E+R+ QG LAE+PYA AFF+ LN R +I SD+ Sbjct: 1 MIPNNRALVPVNEYQQAAIHAVVLVERRKDQGKQLAEFPYAKAFFKVLNNGRGQILASDI 60 Query: 60 RFFMPSLTAEELHGNRL-QWLYAIDVLIETQGEVCLLPLPGDAAERLFPSVRFRVRERSR 118 R + +E G + ++ A+D LIE+ G+ LPL GD A LFP+ RER Sbjct: 61 RQISSNYFPDERGGASIPHYIEALDRLIESGGQYSPLPLSGDVAATLFPAYGELCRERRE 120 Query: 119 HKSALVMQKYSRQQAREAEQKARAYQALVAQAEIELAFHSPETVGSWHARWSDR-VAEHD 177 K + ++ R Q+RE +Q+ R YQ +AQAE+ELAF +P TVG+W+A WS R + E D Sbjct: 121 RKWDMQFERKERWQSREKQQQRRRYQNQLAQAEVELAFVTPSTVGAWYAYWSKRDIYEDD 180 Query: 178 LETLFWQWGERFPSLAGMERWQWQDMPFWQVIAEASLAAREAGHAVREMERWMVPNKL 235 L +F+ W ERFP +AG ++ W V+ A + A R ++PNKL Sbjct: 181 LTEVFFAWFERFPCMAGCNLQHYKSDALWAVMERLQQAEADLSEAERVFNALLIPNKL 238 >UniRef50_A6TIS0 Plasmid SOS inhibition n=10 Tax=Enterobacteriaceae RepID=A6TIS0_KLEP7 Length = 240 Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 89/233 (38%), Positives = 123/233 (52%), Gaps = 3/233 (1%) Query: 5 SQALVPLSTEQQAAWRAVAETEKRRHQGNTLAEYPYAGAFFRCLNGSRRISLSDLRFFMP 64 S++LV L +QAA +A+ E R +G L P+ F R L GS RI+ +++ +P Sbjct: 5 SRSLVTLQPARQAALQAIMTVEDARQRGARLPSMPHVRTFLRLLTGSGRIN-NEVPRRIP 63 Query: 65 SL--TAEELHGNRLQWLYAIDVLIETQGEVCLLPLPGDAAERLFPSVRFRVRERSRHKSA 122 L ++ N Q A+DVLI + GE C LPL D LFP VR ER + Sbjct: 64 GLYRDPKDRLSNLKQVEEALDVLIASNGEYCPLPLSQDVQSELFPEVRHARGERRTQRQN 123 Query: 123 LVMQKYSRQQAREAEQKARAYQALVAQAEIELAFHSPETVGSWHARWSDRVAEHDLETLF 182 + + R++AR+ EQ Q L+ QA EL F SPETV SW+ RWSD +LE F Sbjct: 124 IAFTRKMRREARKVEQSWLLRQNLLGQAVTELNFQSPETVNSWYRRWSDEFDASELEPAF 183 Query: 183 WQWGERFPSLAGMERWQWQDMPFWQVIAEASLAAREAGHAVREMERWMVPNKL 235 W+W RF SL + P ++V+ E +E+ A+ E ERW+VPNKL Sbjct: 184 WRWQTRFTSLRDLRWLLCAHAPLYEVMHEIRFIVQESEEAILERERWLVPNKL 236 >UniRef50_D1S159 Protein PsiA n=1 Tax=Serratia odorifera 4Rx13 RepID=D1S159_SEROD Length = 243 Score = 134 bits (336), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 92/244 (37%), Positives = 134/244 (54%), Gaps = 13/244 (5%) Query: 1 MSVRSQALVPLSTEQQAAWRAVAETEKRRHQGNTLAEYPYAGAFFRCLNGSR-RISLSDL 59 M ++ALVP++ QQAA AV E+++ QG LA +PYA AFF+ LN R +I +D+ Sbjct: 1 MIPNNRALVPVNEYQQAAVHAVVLVERKKVQGKRLAAFPYAKAFFKVLNNGRGQILSNDI 60 Query: 60 RFFMPSLTAEELHGNRL-QWLYAIDVLIETQGEVCLLPLPGDAAERLFPSVRFRVRERSR 118 R + +E G + Q++ A+D LIE+ G+ LPL D A LFP+ RER Sbjct: 61 RKISSNYFPDERGGASIAQYVEALDRLIESSGQYSPLPLSSDVAATLFPAYGELCRERRE 120 Query: 119 HKSALVMQKYSRQQAREAEQKARAYQALVAQAEIELAFHSPETVGSWHARWSDR-VAEHD 177 + + ++ R+++RE +QK R YQ +AQAE+ELAF +P TV +W+ RWS + + E D Sbjct: 121 RQWDMKYERKERRRSREEQQKRRRYQTQLAQAEVELAFTTPSTVSAWYLRWSKQDIYEDD 180 Query: 178 LETLFWQWGERFPSLAGMERWQWQDMPFWQVI-----AEASLAAREAGHAVREMERWMVP 232 L +W ERFP + + W VI AE + RE R ++P Sbjct: 181 LVENVLEWIERFPCMTESGLHLHKSAALWSVIERLVRAETNFTERE-----RIFNSLLIP 235 Query: 233 NKLR 236 NKLR Sbjct: 236 NKLR 239 >UniRef50_B5RKA5 Putative PsiA protein n=1 Tax=Klebsiella pneumoniae 342 RepID=B5RKA5_KLEP3 Length = 243 Score = 81.3 bits (199), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 51/178 (28%), Positives = 88/178 (49%), Gaps = 7/178 (3%) Query: 7 ALVPLSTEQQAAWRAVAETEKRRHQGNTLAEYPYAGAFFRCLNGSRRISLSDLR----FF 62 +LVP++ Q+ A ++A E RR G E Y AFF+ L G +I+ +DLR + Sbjct: 5 SLVPINPFQRCAMASIASVENRRSLGRKTGELAYVKAFFKELTGKSQITSNDLRKVDASY 64 Query: 63 MPSLTAEELHGNRLQWLYAIDVLIETQGEVCLLPLPGDAAERLFPSVRFRVRERSRHKSA 122 P + E + ++L AID+LIE++GE +LPL A +FP ++ R +R H+ Sbjct: 65 DPFVRGE---ATKFEYLRAIDILIESRGECFILPLSRSLAVSMFPGLQNRDLQRREHRDR 121 Query: 123 LVMQKYSRQQAREAEQKARAYQALVAQAEIELAFHSPETVGSWHARWSDRVAEHDLET 180 + Q+ R +++ + V+++ + L+F P W W + + L T Sbjct: 122 IHDQRVERLTIKKSNLLNYKLELNVSKSRLYLSFCLPGQHKIWLEEWRNDIHGQGLTT 179 >UniRef50_Q8L256 Putative uncharacterized protein orf289 n=2 Tax=Proteus vulgaris RepID=Q8L256_PROVU Length = 184 Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 32/149 (21%), Positives = 68/149 (45%), Gaps = 8/149 (5%) Query: 62 FMPSLTAEELHGNRLQWLYAIDVLIETQGEVCLLPLPGDAAERLFPSVRFRVRERSRHKS 121 + PS E + ++ AID +IE++G+ ++PL +FP+V+ +R H+ Sbjct: 8 YNPSYRGE---ATKTDYIRAIDTIIESRGKTWIIPLSKAVITAMFPAVQSGEHQRISHRE 64 Query: 122 ALVMQKYSRQQAREAEQKARAYQALVAQAEIELAFHSPETVGSWHARWSDR-----VAEH 176 + + +R++ ++ ++ A + + + L F P +W A W D V++ Sbjct: 65 KIATARSARREQKQKREEMSASENAQSAVWVGLQFCLPGEHKAWLAHWRDELEMAGVSDW 124 Query: 177 DLETLFWQWGERFPSLAGMERWQWQDMPF 205 +L + +W F + W+W D + Sbjct: 125 ELRNILVRWWGAFWIASAPTDWRWCDTLY 153 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P17976 Protein psiA n=71 Tax=root RepID=PSIA2_ECOLX 309 7e-83 UniRef50_B5MTY0 Plasmid SOS inhibition protein A n=2 Tax=Salmone... 288 7e-77 UniRef50_A7M7G4 PsiA n=1 Tax=Serratia entomophila RepID=A7M7G4_9... 285 7e-76 UniRef50_D1S159 Protein PsiA n=1 Tax=Serratia odorifera 4Rx13 Re... 268 7e-71 UniRef50_A6TIS0 Plasmid SOS inhibition n=10 Tax=Enterobacteriace... 263 3e-69 UniRef50_B5RKA5 Putative PsiA protein n=1 Tax=Klebsiella pneumon... 235 1e-60 UniRef50_Q8L256 Putative uncharacterized protein orf289 n=2 Tax=... 168 2e-40 Sequences not found previously or not previously below threshold: CONVERGED! >UniRef50_P17976 Protein psiA n=71 Tax=root RepID=PSIA2_ECOLX Length = 239 Score = 309 bits (790), Expect = 7e-83, Method: Composition-based stats. Identities = 233/239 (97%), Positives = 234/239 (97%) Query: 1 MSVRSQALVPLSTEQQAAWRAVAETEKRRHQGNTLAEYPYAGAFFRCLNGSRRISLSDLR 60 MS RSQALVPLS EQQAAWRAVAETEKRRHQGNTLAEYPYAGAFFRCLNGSRRISLSDLR Sbjct: 1 MSARSQALVPLSAEQQAAWRAVAETEKRRHQGNTLAEYPYAGAFFRCLNGSRRISLSDLR 60 Query: 61 FFMPSLTAEELHGNRLQWLYAIDVLIETQGEVCLLPLPGDAAERLFPSVRFRVRERSRHK 120 FFMPSLTAEEL GNR QWLYA+DVLIETQGEVCLLPLPGDAAERLFPSVRFRVRERSRHK Sbjct: 61 FFMPSLTAEELRGNRSQWLYAVDVLIETQGEVCLLPLPGDAAERLFPSVRFRVRERSRHK 120 Query: 121 SALVMQKYSRQQAREAEQKARAYQALVAQAEIELAFHSPETVGSWHARWSDRVAEHDLET 180 SALVMQKYSRQQAREAEQKARAYQALVAQAEIELAFHSPETVGSWHARWSDRVAEHDLET Sbjct: 121 SALVMQKYSRQQAREAEQKARAYQALVAQAEIELAFHSPETVGSWHARWSDRVAEHDLET 180 Query: 181 LFWQWGERFPSLAGMERWQWQDMPFWQVIAEASLAAREAGHAVREMERWMVPNKLREAA 239 LFWQWGERFPSLAGMERWQWQDMPFWQVIAE SLAAREAGHAVREMERWMVPNKLREAA Sbjct: 181 LFWQWGERFPSLAGMERWQWQDMPFWQVIAERSLAAREAGHAVREMERWMVPNKLREAA 239 >UniRef50_B5MTY0 Plasmid SOS inhibition protein A n=2 Tax=Salmonella enterica subsp. enterica RepID=B5MTY0_SALET Length = 242 Score = 288 bits (738), Expect = 7e-77, Method: Composition-based stats. Identities = 120/236 (50%), Positives = 166/236 (70%), Gaps = 1/236 (0%) Query: 1 MSVRSQALVPLSTEQQAAWRAVAETEKRRHQGNTLAEYPYAGAFFRCLNGSRRISLSDLR 60 M + +L+PLS E++AA +A+AE EK+ +G +AE+ YA AFFR LNGS+R+++ D+ Sbjct: 1 MIPANLSLIPLSHERRAAMQAIAEVEKKYERGVHIAEFAYAHAFFRILNGSKRVTVKDIG 60 Query: 61 FFMPSLTAEELHGNRLQWLYAIDVLIETQGEVCLLPLPGDAAERLFPSVRFRVRERSRHK 120 +F P +TA+ L G + WL AID LIE++G C LPL RLFP +F++ ER R + Sbjct: 61 WFSPGMTAQNLRGKKQAWLAAIDRLIESRGACCWLPLSVSDGWRLFPETKFQMSERRRRQ 120 Query: 121 SALVMQKYSRQQAREAEQKARAYQALVAQAEIELAFHSPETVGSWHARWS-DRVAEHDLE 179 + L +KY+RQ+ +EA Q+ AYQAL QAEI+LAFH+PETV SW ARWS + + DLE Sbjct: 121 NELCAEKYTRQRRKEACQRESAYQALAGQAEIDLAFHTPETVSSWSARWSGTELRQCDLE 180 Query: 180 TLFWQWGERFPSLAGMERWQWQDMPFWQVIAEASLAAREAGHAVREMERWMVPNKL 235 +FW+W ERFPSL MERW + PFW V+ E+ A+E+ +VR++ERWMVPNKL Sbjct: 181 DMFWRWSERFPSLEPMERWMMANQPFWSVMVESDALAKESPESVRQLERWMVPNKL 236 >UniRef50_A7M7G4 PsiA n=1 Tax=Serratia entomophila RepID=A7M7G4_9ENTR Length = 242 Score = 285 bits (730), Expect = 7e-76, Method: Composition-based stats. Identities = 97/238 (40%), Positives = 137/238 (57%), Gaps = 3/238 (1%) Query: 1 MSVRSQALVPLSTEQQAAWRAVAETEKRRHQGNTLAEYPYAGAFFRCLNGSR-RISLSDL 59 M ++ALVP++ QQAA AV E+R+ QG LAE+PYA AFF+ LN R +I SD+ Sbjct: 1 MIPNNRALVPVNEYQQAAIHAVVLVERRKDQGKQLAEFPYAKAFFKVLNNGRGQILASDI 60 Query: 60 RFFMPSLTAEELHGNRL-QWLYAIDVLIETQGEVCLLPLPGDAAERLFPSVRFRVRERSR 118 R + +E G + ++ A+D LIE+ G+ LPL GD A LFP+ RER Sbjct: 61 RQISSNYFPDERGGASIPHYIEALDRLIESGGQYSPLPLSGDVAATLFPAYGELCRERRE 120 Query: 119 HKSALVMQKYSRQQAREAEQKARAYQALVAQAEIELAFHSPETVGSWHARWSDR-VAEHD 177 K + ++ R Q+RE +Q+ R YQ +AQAE+ELAF +P TVG+W+A WS R + E D Sbjct: 121 RKWDMQFERKERWQSREKQQQRRRYQNQLAQAEVELAFVTPSTVGAWYAYWSKRDIYEDD 180 Query: 178 LETLFWQWGERFPSLAGMERWQWQDMPFWQVIAEASLAAREAGHAVREMERWMVPNKL 235 L +F+ W ERFP +AG ++ W V+ A + A R ++PNKL Sbjct: 181 LTEVFFAWFERFPCMAGCNLQHYKSDALWAVMERLQQAEADLSEAERVFNALLIPNKL 238 >UniRef50_D1S159 Protein PsiA n=1 Tax=Serratia odorifera 4Rx13 RepID=D1S159_SEROD Length = 243 Score = 268 bits (686), Expect = 7e-71, Method: Composition-based stats. Identities = 89/239 (37%), Positives = 129/239 (53%), Gaps = 3/239 (1%) Query: 1 MSVRSQALVPLSTEQQAAWRAVAETEKRRHQGNTLAEYPYAGAFFRCLNGSR-RISLSDL 59 M ++ALVP++ QQAA AV E+++ QG LA +PYA AFF+ LN R +I +D+ Sbjct: 1 MIPNNRALVPVNEYQQAAVHAVVLVERKKVQGKRLAAFPYAKAFFKVLNNGRGQILSNDI 60 Query: 60 RFFMPSLTAEELHGNRL-QWLYAIDVLIETQGEVCLLPLPGDAAERLFPSVRFRVRERSR 118 R + +E G + Q++ A+D LIE+ G+ LPL D A LFP+ RER Sbjct: 61 RKISSNYFPDERGGASIAQYVEALDRLIESSGQYSPLPLSSDVAATLFPAYGELCRERRE 120 Query: 119 HKSALVMQKYSRQQAREAEQKARAYQALVAQAEIELAFHSPETVGSWHARWSD-RVAEHD 177 + + ++ R+++RE +QK R YQ +AQAE+ELAF +P TV +W+ RWS + E D Sbjct: 121 RQWDMKYERKERRRSREEQQKRRRYQTQLAQAEVELAFTTPSTVSAWYLRWSKQDIYEDD 180 Query: 178 LETLFWQWGERFPSLAGMERWQWQDMPFWQVIAEASLAAREAGHAVREMERWMVPNKLR 236 L +W ERFP + + W VI A R ++PNKLR Sbjct: 181 LVENVLEWIERFPCMTESGLHLHKSAALWSVIERLVRAETNFTERERIFNSLLIPNKLR 239 >UniRef50_A6TIS0 Plasmid SOS inhibition n=10 Tax=Enterobacteriaceae RepID=A6TIS0_KLEP7 Length = 240 Score = 263 bits (673), Expect = 3e-69, Method: Composition-based stats. Identities = 90/237 (37%), Positives = 124/237 (52%), Gaps = 3/237 (1%) Query: 1 MSVRSQALVPLSTEQQAAWRAVAETEKRRHQGNTLAEYPYAGAFFRCLNGSRRISLSDLR 60 M S++LV L +QAA +A+ E R +G L P+ F R L GS RI+ +++ Sbjct: 1 MIHSSRSLVTLQPARQAALQAIMTVEDARQRGARLPSMPHVRTFLRLLTGSGRIN-NEVP 59 Query: 61 FFMPSL--TAEELHGNRLQWLYAIDVLIETQGEVCLLPLPGDAAERLFPSVRFRVRERSR 118 +P L ++ N Q A+DVLI + GE C LPL D LFP VR ER Sbjct: 60 RRIPGLYRDPKDRLSNLKQVEEALDVLIASNGEYCPLPLSQDVQSELFPEVRHARGERRT 119 Query: 119 HKSALVMQKYSRQQAREAEQKARAYQALVAQAEIELAFHSPETVGSWHARWSDRVAEHDL 178 + + + R++AR+ EQ Q L+ QA EL F SPETV SW+ RWSD +L Sbjct: 120 QRQNIAFTRKMRREARKVEQSWLLRQNLLGQAVTELNFQSPETVNSWYRRWSDEFDASEL 179 Query: 179 ETLFWQWGERFPSLAGMERWQWQDMPFWQVIAEASLAAREAGHAVREMERWMVPNKL 235 E FW+W RF SL + P ++V+ E +E+ A+ E ERW+VPNKL Sbjct: 180 EPAFWRWQTRFTSLRDLRWLLCAHAPLYEVMHEIRFIVQESEEAILERERWLVPNKL 236 >UniRef50_B5RKA5 Putative PsiA protein n=1 Tax=Klebsiella pneumoniae 342 RepID=B5RKA5_KLEP3 Length = 243 Score = 235 bits (598), Expect = 1e-60, Method: Composition-based stats. Identities = 54/204 (26%), Positives = 92/204 (45%), Gaps = 6/204 (2%) Query: 7 ALVPLSTEQQAAWRAVAETEKRRHQGNTLAEYPYAGAFFRCLNGSRRISLSDLRFFMPSL 66 +LVP++ Q+ A ++A E RR G E Y AFF+ L G +I+ +DLR S Sbjct: 5 SLVPINPFQRCAMASIASVENRRSLGRKTGELAYVKAFFKELTGKSQITSNDLRKVDASY 64 Query: 67 TAEELH-GNRLQWLYAIDVLIETQGEVCLLPLPGDAAERLFPSVRFRVRERSRHKSALVM 125 + ++L AID+LIE++GE +LPL A +FP ++ R +R H+ + Sbjct: 65 DPFVRGEATKFEYLRAIDILIESRGECFILPLSRSLAVSMFPGLQNRDLQRREHRDRIHD 124 Query: 126 QKYSRQQAREAEQKARAYQALVAQAEIELAFHSPETVGSWHARWSDRVAEHDLET----- 180 Q+ R +++ + V+++ + L+F P W W + + L T Sbjct: 125 QRVERLTIKKSNLLNYKLELNVSKSRLYLSFCLPGQHKIWLEEWRNDIHGQGLTTTDIYL 184 Query: 181 LFWQWGERFPSLAGMERWQWQDMP 204 L W F + + + W Sbjct: 185 LINSWWSSFWITSYRKDYIWCYTL 208 >UniRef50_Q8L256 Putative uncharacterized protein orf289 n=2 Tax=Proteus vulgaris RepID=Q8L256_PROVU Length = 184 Score = 168 bits (425), Expect = 2e-40, Method: Composition-based stats. Identities = 35/178 (19%), Positives = 76/178 (42%), Gaps = 9/178 (5%) Query: 60 RFFMPSLTAEELHGNRLQWLYAIDVLIETQGEVCLLPLPGDAAERLFPSVRFRVRERSRH 119 + PS E + ++ AID +IE++G+ ++PL +FP+V+ +R H Sbjct: 6 PAYNPSYRGE---ATKTDYIRAIDTIIESRGKTWIIPLSKAVITAMFPAVQSGEHQRISH 62 Query: 120 KSALVMQKYSRQQAREAEQKARAYQALVAQAEIELAFHSPETVGSWHARWSDR-----VA 174 + + + +R++ ++ ++ A + + + L F P +W A W D V+ Sbjct: 63 REKIATARSARREQKQKREEMSASENAQSAVWVGLQFCLPGEHKAWLAHWRDELEMAGVS 122 Query: 175 EHDLETLFWQWGERFPSLAGMERWQWQDMPFWQVIAEASLAAREAGHAVREMERWMVP 232 + +L + +W F + W+W D + ++ E + + R +P Sbjct: 123 DWELRNILVRWWGAFWIASAPTDWRWCDT-LYDLLNELDYVISTSSERDLCLCRSALP 179 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.307 0.125 0.337 Lambda K H 0.267 0.0381 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 834,655,486 Number of Sequences: 3077464 Number of extensions: 28791004 Number of successful extensions: 114614 Number of sequences better than 1.0e-01: 8 Number of HSP's better than 0.1 without gapping: 14 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 114580 Number of HSP's gapped (non-prelim): 15 length of query: 239 length of database: 1,040,396,356 effective HSP length: 125 effective length of query: 114 effective length of database: 655,713,356 effective search space: 74751322584 effective search space used: 74751322584 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 91 (39.8 bits)