Secondary structure and disorder prediction

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Sequence		M	K	K	I	L	T	T	P	I	K	A	E	D	L	Q	D	I	R	V	G	D	V	I	Y	L	T	G	T	L	V	T	C	R	D	V	C	H	R	R	L	I	E	L	K	R	P	I	P	Y	D	L	N	G	K	A	I	F	H	A	G
Secondary structure
SS confidence
Disorder		?	?	?		?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Sequence		P	I	V	R	K	N	G	D	K	W	E	M	V	S	V	G	P	T	T	S	M	R	M	E	S	F	E	R	E	F	I	E	Q	T	G	V	K	L	V	V	G	K	G	G	M	G	P	L	T	E	E	G	C	Q	K	F	K	A	L	H
Secondary structure
SS confidence
Disorder							?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Sequence		V	I	F	P	A	G	C	A	V	L	A	A	T	Q	V	E	E	I	E	E	V	H	W	T	E	L	G	M	P	E	S	L	W	V	C	R	V	K	E	F	G	P	L	I	V	S	I	D	T	H	G	N	N	L	I	A	E	N	K	K
Secondary structure
SS confidence
Disorder
Disorder confidence
		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Sequence		L	F	A	E	R	R	D	P	I	V	E	E	I	C	E	H	V	H	Y	I	K
Secondary structure
SS confidence
Disorder																	?	?	?	?	?	?
Disorder confidence

Confidence Key
High(9)											Low (0)

?	Disordered
	Alpha helix
	Beta strand

Domain analysis

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank Aligned region

PDB 2isb chain A domain 1 Region: 1 - 176 Aligned: 174 Modelled: 175 Confidence: 100.0% Identity: 38% Fold: The "swivelling" beta/beta/alpha domain Superfamily: FumA C-terminal domain-like Family: FumA C-terminal domain-like Phyre2 PDB 4a1o chain B Region: 89 - 123 Aligned: 35 Modelled: 35 Confidence: 66.5% Identity: 26% PDB header:transferase-hydrolase Chain: B: PDB Molecule:bifunctional purine biosynthesis protein purh; PDBTitle: crystal structure of mycobacterium tuberculosis purh complexed with2 aicar and a novel nucleotide cfair, at 2.48 a resolution. Phyre2 PDB 1zcz chain A Region: 89 - 123 Aligned: 35 Modelled: 35 Confidence: 65.9% Identity: 26% PDB header:transferase/hydrolase Chain: A: PDB Molecule:bifunctional purine biosynthesis protein purh; PDBTitle: crystal structure of phosphoribosylaminoimidazolecarboxamide2 formyltransferase / imp cyclohydrolase (tm1249) from thermotoga3 maritima at 1.88 a resolution Phyre2 PDB 1zcz chain A domain 2 Region: 89 - 123 Aligned: 35 Modelled: 35 Confidence: 64.6% Identity: 26% Fold: Cytidine deaminase-like Superfamily: Cytidine deaminase-like Family: AICAR transformylase domain of bifunctional purine biosynthesis enzyme ATIC Phyre2 PDB 1ed7 chain A Region: 18 - 33 Aligned: 16 Modelled: 16 Confidence: 48.5% Identity: 19% Fold: WW domain-like Superfamily: Carbohydrate binding domain Family: Carbohydrate binding domain Phyre2 PDB 1g8m chain A domain 2 Region: 89 - 123 Aligned: 35 Modelled: 35 Confidence: 43.8% Identity: 17% Fold: Cytidine deaminase-like Superfamily: Cytidine deaminase-like Family: AICAR transformylase domain of bifunctional purine biosynthesis enzyme ATIC Phyre2 PDB 1pkx chain A domain 2 Region: 89 - 123 Aligned: 35 Modelled: 35 Confidence: 42.6% Identity: 14% Fold: Cytidine deaminase-like Superfamily: Cytidine deaminase-like Family: AICAR transformylase domain of bifunctional purine biosynthesis enzyme ATIC Phyre2 PDB 1o6a chain A Region: 6 - 59 Aligned: 40 Modelled: 40 Confidence: 41.4% Identity: 25% Fold: Surface presentation of antigens (SPOA) Superfamily: Surface presentation of antigens (SPOA) Family: Surface presentation of antigens (SPOA) Phyre2 PDB 1thz chain A Region: 89 - 123 Aligned: 35 Modelled: 35 Confidence: 39.1% Identity: 17% PDB header:transferase, hydrolase Chain: A: PDB Molecule:bifunctional purine biosynthesis protein purh; PDBTitle: crystal structure of avian aicar transformylase in complex2 with a novel inhibitor identified by virtual ligand3 screening Phyre2 PDB 1g8f chain A domain 1 Region: 1 - 26 Aligned: 26 Modelled: 26 Confidence: 35.3% Identity: 15% Fold: PUA domain-like Superfamily: PUA domain-like Family: ATP sulfurylase N-terminal domain Phyre2 PDB 3jvi chain A Region: 67 - 196 Aligned: 118 Modelled: 128 Confidence: 31.7% Identity: 14% PDB header:hydrolase Chain: A: PDB Molecule:protein tyrosine phosphatase; PDBTitle: product state mimic crystal structure of protein tyrosine phosphatase2 from entamoeba histolytica Phyre2 PDB 1z5y chain E domain 1 Region: 157 - 196 Aligned: 39 Modelled: 40 Confidence: 31.3% Identity: 23% Fold: Thioredoxin fold Superfamily: Thioredoxin-like Family: Glutathione peroxidase-like Phyre2 PDB 1x6v chain A domain 1 Region: 1 - 26 Aligned: 26 Modelled: 26 Confidence: 29.4% Identity: 12% Fold: PUA domain-like Superfamily: PUA domain-like Family: ATP sulfurylase N-terminal domain Phyre2 PDB 3opy chain E Region: 107 - 174 Aligned: 60 Modelled: 68 Confidence: 29.4% Identity: 17% PDB header:transferase Chain: E: PDB Molecule:6-phosphofructo-1-kinase alpha-subunit; PDBTitle: crystal structure of pichia pastoris phosphofructokinase in the t-2 state Phyre2 PDB 3ibg chain F Region: 83 - 112 Aligned: 30 Modelled: 30 Confidence: 28.3% Identity: 33% PDB header:hydrolase Chain: F: PDB Molecule:atpase, subunit of the get complex; PDBTitle: crystal structure of aspergillus fumigatus get3 with bound2 adp Phyre2 PDB 1vkz chain A domain 2 Region: 98 - 128 Aligned: 31 Modelled: 31 Confidence: 26.9% Identity: 16% Fold: PreATP-grasp domain Superfamily: PreATP-grasp domain Family: BC N-terminal domain-like Phyre2 PDB 3p9z chain A Region: 68 - 117 Aligned: 42 Modelled: 50 Confidence: 26.6% Identity: 17% PDB header:ligase Chain: A: PDB Molecule:uroporphyrinogen iii cosynthase (hemd); PDBTitle: crystal structure of uroporphyrinogen-iii synthetase from helicobacter2 pylori 26695 Phyre2 PDB 1e32 chain A domain 1 Region: 9 - 28 Aligned: 20 Modelled: 20 Confidence: 26.0% Identity: 20% Fold: Double psi beta-barrel Superfamily: ADC-like Family: Cdc48 N-terminal domain-like Phyre2 PDB 1jo0 chain A Region: 78 - 116 Aligned: 39 Modelled: 39 Confidence: 24.6% Identity: 13% Fold: IF3-like Superfamily: YhbY-like Family: YhbY-like Phyre2 PDB 1aiw chain A Region: 20 - 33 Aligned: 14 Modelled: 14 Confidence: 24.6% Identity: 36% Fold: WW domain-like Superfamily: Carbohydrate binding domain Family: Carbohydrate binding domain Phyre2 1 d2isba1 2 c4a1oB_ 3 c1zczA_ 4 d1zcza2 5 d1ed7a_ 6 d1g8ma2 7 d1pkxa2 8 d1o6aa_ 9 c1thzA_ 10 d1g8fa1 11 c3jviA_ 12 d1z5ye1 13 d1x6va1 14 c3opyE_ 15 c3ibgF_ 16 d1vkza2 17 c3p9zA_ 18 d1e32a1 19 d1jo0a_ 20 d1aiwa_ 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d2isba1 100.0 38 Fold:The "swivelling" beta/beta/alpha domain Superfamily:FumA C-terminal domain-like Family:FumA C-terminal domain-like 2 c4a1oB_ 66.5 26 PDB header:transferase-hydrolase Chain: B: PDB Molecule:bifunctional purine biosynthesis protein purh; PDBTitle: crystal structure of mycobacterium tuberculosis purh complexed with2 aicar and a novel nucleotide cfair, at 2.48 a resolution. 3 c1zczA_ 65.9 26 PDB header:transferase/hydrolase Chain: A: PDB Molecule:bifunctional purine biosynthesis protein purh; PDBTitle: crystal structure of phosphoribosylaminoimidazolecarboxamide2 formyltransferase / imp cyclohydrolase (tm1249) from thermotoga3 maritima at 1.88 a resolution 4 d1zcza2 64.6 26 Fold:Cytidine deaminase-like Superfamily:Cytidine deaminase-like Family:AICAR transformylase domain of bifunctional purine biosynthesis enzyme ATIC 5 d1ed7a_ 48.5 19 Fold:WW domain-like Superfamily:Carbohydrate binding domain Family:Carbohydrate binding domain 6 d1g8ma2 43.8 17 Fold:Cytidine deaminase-like Superfamily:Cytidine deaminase-like Family:AICAR transformylase domain of bifunctional purine biosynthesis enzyme ATIC 7 d1pkxa2 42.6 14 Fold:Cytidine deaminase-like Superfamily:Cytidine deaminase-like Family:AICAR transformylase domain of bifunctional purine biosynthesis enzyme ATIC 8 d1o6aa_ 41.4 25 Fold:Surface presentation of antigens (SPOA) Superfamily:Surface presentation of antigens (SPOA) Family:Surface presentation of antigens (SPOA) 9 c1thzA_ 39.1 17 PDB header:transferase, hydrolase Chain: A: PDB Molecule:bifunctional purine biosynthesis protein purh; PDBTitle: crystal structure of avian aicar transformylase in complex2 with a novel inhibitor identified by virtual ligand3 screening 10 d1g8fa1 35.3 15 Fold:PUA domain-like Superfamily:PUA domain-like Family:ATP sulfurylase N-terminal domain 11 c3jviA_ 31.7 14 PDB header:hydrolase Chain: A: PDB Molecule:protein tyrosine phosphatase; PDBTitle: product state mimic crystal structure of protein tyrosine phosphatase2 from entamoeba histolytica 12 d1z5ye1 31.3 23 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 13 d1x6va1 29.4 12 Fold:PUA domain-like Superfamily:PUA domain-like Family:ATP sulfurylase N-terminal domain 14 c3opyE_ 29.4 17 PDB header:transferase Chain: E: PDB Molecule:6-phosphofructo-1-kinase alpha-subunit; PDBTitle: crystal structure of pichia pastoris phosphofructokinase in the t-2 state 15 c3ibgF_ 28.3 33 PDB header:hydrolase Chain: F: PDB Molecule:atpase, subunit of the get complex; PDBTitle: crystal structure of aspergillus fumigatus get3 with bound2 adp 16 d1vkza2 26.9 16 Fold:PreATP-grasp domain Superfamily:PreATP-grasp domain Family:BC N-terminal domain-like 17 c3p9zA_ 26.6 17 PDB header:ligase Chain: A: PDB Molecule:uroporphyrinogen iii cosynthase (hemd); PDBTitle: crystal structure of uroporphyrinogen-iii synthetase from helicobacter2 pylori 26695 18 d1e32a1 26.0 20 Fold:Double psi beta-barrel Superfamily:ADC-like Family:Cdc48 N-terminal domain-like 19 d1jo0a_ 24.6 13 Fold:IF3-like Superfamily:YhbY-like Family:YhbY-like 20 d1aiwa_ 24.6 36 Fold:WW domain-like Superfamily:Carbohydrate binding domain Family:Carbohydrate binding domain 21 d12asa_ not modelled 24.1 8 Fold:Class II aaRS and biotin synthetases Superfamily:Class II aaRS and biotin synthetases Family:Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain 22 d1xnea_ not modelled 22.8 27 Fold:PUA domain-like Superfamily:PUA domain-like Family:ProFAR isomerase associated domain 23 d1o9ya_ not modelled 22.7 10 Fold:Surface presentation of antigens (SPOA) Superfamily:Surface presentation of antigens (SPOA) Family:Surface presentation of antigens (SPOA) 24 c2d49A_ not modelled 22.5 21 PDB header:hydrolase Chain: A: PDB Molecule:chitinase c; PDBTitle: solution structure of the chitin-binding domain of2 streptomyces griseus chitinase c 25 c1r6xA_ not modelled 22.3 15 PDB header:transferase Chain: A: PDB Molecule:atp:sulfate adenylyltransferase; PDBTitle: the crystal structure of a truncated form of yeast atp2 sulfurylase, lacking the c-terminal aps kinase-like domain,3 in complex with sulfate 26 c2qjfB_ not modelled 21.2 12 PDB header:transferase Chain: B: PDB Molecule:bifunctional 3'-phosphoadenosine 5'- PDBTitle: crystal structure of atp-sulfurylase domain of human paps2 synthetase 1 27 d1goia1 not modelled 21.2 14 Fold:WW domain-like Superfamily:Carbohydrate binding domain Family:Carbohydrate binding domain 28 d1s04a_ not modelled 20.8 31 Fold:PUA domain-like Superfamily:PUA domain-like Family:ProFAR isomerase associated domain 29 c1g8gB_ not modelled 20.5 15 PDB header:transferase Chain: B: PDB Molecule:sulfate adenylyltransferase; PDBTitle: atp sulfurylase from s. cerevisiae: the binary product complex with2 aps 30 c1jr2A_ not modelled 19.7 20 PDB header:lyase Chain: A: PDB Molecule:uroporphyrinogen-iii synthase; PDBTitle: structure of uroporphyrinogen iii synthase 31 d1jr2a_ not modelled 19.7 20 Fold:HemD-like Superfamily:HemD-like Family:HemD-like 32 d2cp6a1 not modelled 19.3 21 Fold:SH3-like barrel Superfamily:Cap-Gly domain Family:Cap-Gly domain 33 c2gksB_ not modelled 19.3 23 PDB header:transferase Chain: B: PDB Molecule:bifunctional sat/aps kinase; PDBTitle: crystal structure of the bi-functional atp sulfurylase-aps kinase from2 aquifex aeolicus, a chemolithotrophic thermophile 34 c2zpmA_ not modelled 18.6 15 PDB header:hydrolase Chain: A: PDB Molecule:regulator of sigma e protease; PDBTitle: crystal structure analysis of pdz domain b 35 c3stbC_ not modelled 18.2 33 PDB header:rna binding protein/immune system Chain: C: PDB Molecule:rna-editing complex protein mp42; PDBTitle: a complex of two editosome proteins and two nanobodies 36 d2cpga_ not modelled 18.0 35 Fold:Ribbon-helix-helix Superfamily:Ribbon-helix-helix Family:CopG-like 37 d2dexx3 not modelled 18.0 34 Fold:Pentein, beta/alpha-propeller Superfamily:Pentein Family:Peptidylarginine deiminase Pad4, catalytic C-terminal domain 38 d1tova_ not modelled 17.9 26 Fold:SH3-like barrel Superfamily:Cap-Gly domain Family:Cap-Gly domain 39 c3kh7A_ not modelled 15.6 24 PDB header:oxidoreductase Chain: A: PDB Molecule:thiol:disulfide interchange protein dsbe; PDBTitle: crystal structure of the periplasmic soluble domain of reduced ccmg2 from pseudomonas aeruginosa 40 c3kojA_ not modelled 15.3 43 PDB header:dna binding protein Chain: A: PDB Molecule:uncharacterized protein ycf41; PDBTitle: crystal structure of the ssb domain of q5n255_synp6 protein2 from synechococcus sp. northeast structural genomics3 consortium target snr59a. 41 d1a3xa1 not modelled 14.6 32 Fold:PK beta-barrel domain-like Superfamily:PK beta-barrel domain-like Family:Pyruvate kinase beta-barrel domain 42 c3opyG_ not modelled 13.9 17 PDB header:transferase Chain: G: PDB Molecule:6-phosphofructo-1-kinase alpha-subunit; PDBTitle: crystal structure of pichia pastoris phosphofructokinase in the t-2 state 43 c3en2A_ not modelled 13.6 33 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:probable primosomal replication protein n; PDBTitle: three-dimensional structure of the protein prib from2 ralstonia solanacearum at the resolution 2.3a. northeast3 structural genomics consortium target rsr213c. 44 c3kw0D_ not modelled 13.5 29 PDB header:hydrolase Chain: D: PDB Molecule:cysteine peptidase; PDBTitle: crystal structure of cysteine peptidase (np_982244.1) from bacillus2 cereus atcc 10987 at 2.50 a resolution 45 d1dcsa_ not modelled 13.4 3 Fold:Double-stranded beta-helix Superfamily:Clavaminate synthase-like Family:Penicillin synthase-like 46 d1xr4a2 not modelled 12.6 18 Fold:NagB/RpiA/CoA transferase-like Superfamily:NagB/RpiA/CoA transferase-like Family:CoA transferase alpha subunit-like 47 c2r47C_ not modelled 12.5 17 PDB header:structural genomics, unknown function Chain: C: PDB Molecule:uncharacterized protein mth_862; PDBTitle: crystal structure of mth_862 protein of unknown function from2 methanothermobacter thermautotrophicus 48 d1nq3a_ not modelled 12.4 31 Fold:Bacillus chorismate mutase-like Superfamily:YjgF-like Family:YjgF/L-PSP 49 c2jwlB_ not modelled 12.1 27 PDB header:membrane protein Chain: B: PDB Molecule:protein tolr; PDBTitle: solution structure of periplasmic domain of tolr from h.2 influenzae with saxs data 50 d1b8aa1 not modelled 12.1 13 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Anticodon-binding domain 51 c2l57A_ not modelled 11.7 17 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution structure of an uncharacterized thioredoin-like protein from2 clostridium perfringens 52 d1j7ha_ not modelled 11.7 21 Fold:Bacillus chorismate mutase-like Superfamily:YjgF-like Family:YjgF/L-PSP 53 c2de0X_ not modelled 11.5 29 PDB header:transferase Chain: X: PDB Molecule:alpha-(1,6)-fucosyltransferase; PDBTitle: crystal structure of human alpha 1,6-fucosyltransferase, fut8 54 c2pseA_ not modelled 11.3 13 PDB header:oxidoreductase Chain: A: PDB Molecule:renilla-luciferin 2-monooxygenase; PDBTitle: crystal structures of the luciferase and green fluorescent2 protein from renilla reniformis 55 c3cr8C_ not modelled 10.6 23 PDB header:transferase Chain: C: PDB Molecule:sulfate adenylyltranferase, adenylylsulfate PDBTitle: hexameric aps kinase from thiobacillus denitrificans 56 c3iuwA_ not modelled 10.5 21 PDB header:rna binding protein Chain: A: PDB Molecule:activating signal cointegrator; PDBTitle: crystal structure of activating signal cointegrator (np_814290.1) from2 enterococcus faecalis v583 at 1.58 a resolution 57 c3lzkC_ not modelled 10.4 14 PDB header:hydrolase Chain: C: PDB Molecule:fumarylacetoacetate hydrolase family protein; PDBTitle: the crystal structure of a probably aromatic amino acid2 degradation protein from sinorhizobium meliloti 1021 58 d1y1la_ not modelled 10.1 17 Fold:Phosphotyrosine protein phosphatases I-like Superfamily:Phosphotyrosine protein phosphatases I Family:Low-molecular-weight phosphotyrosine protein phosphatases 59 d2grea1 not modelled 10.1 29 Fold:Domain of alpha and beta subunits of F1 ATP synthase-like Superfamily:Aminopeptidase/glucanase lid domain Family:Aminopeptidase/glucanase lid domain 60 d2gqba1 not modelled 10.1 11 Fold:RPA2825-like Superfamily:RPA2825-like Family:RPA2825-like 61 c2p4sA_ not modelled 10.0 14 PDB header:transferase Chain: A: PDB Molecule:purine nucleoside phosphorylase; PDBTitle: structure of purine nucleoside phosphorylase from anopheles gambiae in2 complex with dadme-immh 62 c1xnjB_ not modelled 9.9 12 PDB header:transferase Chain: B: PDB Molecule:bifunctional 3'-phosphoadenosine 5'-phosphosulfate PDBTitle: aps complex of human paps synthetase 1 63 c3qd7X_ not modelled 9.9 19 PDB header:hydrolase Chain: X: PDB Molecule:uncharacterized protein ydal; PDBTitle: crystal structure of ydal, a stand-alone small muts-related protein2 from escherichia coli 64 c2hc8A_ not modelled 9.8 21 PDB header:transport protein Chain: A: PDB Molecule:cation-transporting atpase, p-type; PDBTitle: structure of the a. fulgidus copa a-domain 65 c3k81D_ not modelled 9.8 26 PDB header:immune system, rna binding protein Chain: D: PDB Molecule:mp18 rna editing complex protein; PDBTitle: structure of the central interaction protein from the trypanosoma2 brucei editosome in complex with single domain antibodies 66 d1krta_ not modelled 9.7 26 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Anticodon-binding domain 67 c3e7kF_ not modelled 9.7 33 PDB header:membrane protein Chain: F: PDB Molecule:trpm7 channel; PDBTitle: crystal structure of an antiparallel coiled-coil tetramerization2 domain from trpm7 channels 68 c2e4hA_ not modelled 9.5 26 PDB header:structural protein Chain: A: PDB Molecule:restin; PDBTitle: solution structure of cytoskeletal protein in complex with2 tubulin tail 69 c2re2A_ not modelled 9.4 12 PDB header:oxidoreductase Chain: A: PDB Molecule:uncharacterized protein ta1041; PDBTitle: crystal structure of a putative iron-molybdenum cofactor (femo-co)2 dinitrogenase (ta1041m) from thermoplasma acidophilum dsm 1728 at3 1.30 a resolution 70 c2fekA_ not modelled 9.4 12 PDB header:hydrolase Chain: A: PDB Molecule:low molecular weight protein-tyrosine- PDBTitle: structure of a protein tyrosine phosphatase 71 d1bbua1 not modelled 9.2 25 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Anticodon-binding domain 72 d1ln4a_ not modelled 9.2 8 Fold:IF3-like Superfamily:YhbY-like Family:YhbY-like 73 d1p9ka_ not modelled 9.1 24 Fold:Alpha-L RNA-binding motif Superfamily:Alpha-L RNA-binding motif Family:YbcJ-like 74 d1jf8a_ not modelled 9.1 17 Fold:Phosphotyrosine protein phosphatases I-like Superfamily:Phosphotyrosine protein phosphatases I Family:Low-molecular-weight phosphotyrosine protein phosphatases 75 c2ju5A_ not modelled 9.0 24 PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin disulfide isomerase; PDBTitle: dsbh oxidoreductase 76 c3k3sG_ not modelled 9.0 29 PDB header:hydrolase Chain: G: PDB Molecule:altronate hydrolase; PDBTitle: crystal structure of altronate hydrolase (fragment 1-84) from shigella2 flexneri. 77 d1bkba1 not modelled 8.9 13 Fold:SH3-like barrel Superfamily:Translation proteins SH3-like domain Family:eIF5a N-terminal domain-like 78 d1pjqa3 not modelled 8.8 21 Fold:Siroheme synthase middle domains-like Superfamily:Siroheme synthase middle domains-like Family:Siroheme synthase middle domains-like 79 c3fk8A_ not modelled 8.8 21 PDB header:isomerase Chain: A: PDB Molecule:disulphide isomerase; PDBTitle: the crystal structure of disulphide isomerase from xylella fastidiosa2 temecula1 80 d5pnta_ not modelled 8.8 11 Fold:Phosphotyrosine protein phosphatases I-like Superfamily:Phosphotyrosine protein phosphatases I Family:Low-molecular-weight phosphotyrosine protein phosphatases 81 d1ueba1 not modelled 8.7 29 Fold:SH3-like barrel Superfamily:Translation proteins SH3-like domain Family:eIF5a N-terminal domain-like 82 c2l18A_ not modelled 8.7 24 PDB header:oxidoreductase Chain: A: PDB Molecule:arsenate reductase; PDBTitle: an arsenate reductase in the phosphate binding state 83 d2ewca1 not modelled 8.7 33 Fold:Bacillus chorismate mutase-like Superfamily:YjgF-like Family:YjgF/L-PSP 84 c2vw9B_ not modelled 8.7 19 PDB header:dna-binding protein Chain: B: PDB Molecule:single-stranded dna binding protein; PDBTitle: single stranded dna binding protein complex from2 helicobacter pylori 85 c3fhwB_ not modelled 8.6 29 PDB header:dna binding protein Chain: B: PDB Molecule:primosomal replication protein n; PDBTitle: crystal structure of the protein prib from bordetella parapertussis.2 northeast structural genomics consortium target bpr162. 86 d1nvta1 not modelled 8.6 16 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Aminoacid dehydrogenase-like, C-terminal domain 87 c1y96D_ not modelled 8.6 35 PDB header:rna binding protein Chain: D: PDB Molecule:gem-associated protein 7; PDBTitle: crystal structure of the gemin6/gemin7 heterodimer from the2 human smn complex 88 d1qaha_ not modelled 8.4 24 Fold:Bacillus chorismate mutase-like Superfamily:YjgF-like Family:YjgF/L-PSP 89 c3fw2A_ not modelled 8.4 20 PDB header:oxidoreductase Chain: A: PDB Molecule:thiol-disulfide oxidoreductase; PDBTitle: c-terminal domain of putative thiol-disulfide oxidoreductase from2 bacteroides thetaiotaomicron. 90 d1rq8a_ not modelled 8.3 14 Fold:IF3-like Superfamily:YhbY-like Family:YhbY-like 91 d2eifa1 not modelled 8.2 19 Fold:SH3-like barrel Superfamily:Translation proteins SH3-like domain Family:eIF5a N-terminal domain-like 92 d1onia_ not modelled 8.1 21 Fold:Bacillus chorismate mutase-like Superfamily:YjgF-like Family:YjgF/L-PSP 93 d1fdra1 not modelled 8.0 19 Fold:Reductase/isomerase/elongation factor common domain Superfamily:Riboflavin synthase domain-like Family:Ferredoxin reductase FAD-binding domain-like 94 c3tqyA_ not modelled 7.9 33 PDB header:transferase Chain: A: PDB Molecule:single-stranded dna-binding protein; PDBTitle: structure of a single-stranded dna-binding protein (ssb), from2 coxiella burnetii 95 d1pk6a_ not modelled 7.9 20 Fold:TNF-like Superfamily:TNF-like Family:TNF-like 96 c1o91B_ not modelled 7.7 40 PDB header:collagen Chain: B: PDB Molecule:collagen alpha 1(viii) chain; PDBTitle: crystal structure of a collagen viii nc1 domain trimer 97 d1o91a_ not modelled 7.7 40 Fold:TNF-like Superfamily:TNF-like Family:TNF-like 98 d1gsoa2 not modelled 7.7 19 Fold:PreATP-grasp domain Superfamily:PreATP-grasp domain Family:BC N-terminal domain-like 99 d1iz6a1 not modelled 7.6 13 Fold:SH3-like barrel Superfamily:Translation proteins SH3-like domain Family:eIF5a N-terminal domain-like

Binding site prediction

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
© Structural Bioinformatics Group Imperial College London Lawrence Kelley, Benjamin Jefferys Disclaimer Terms and Conditions	Component software Template detection: HHpred 1.51 Secondary structure prediction: Psi-pred 2.5 Disorder prediction: Disopred 2.4 Transmembrane prediction: Memsat_SVM Multi-template modelling and ab initio: Poing 1.0