 |
| Job Description | Q46948 | | Confidence | 30.88% | Date | Thu Jan 5 12:36:06 GMT 2012 |
| Rank | 111 | Aligned Residues | 91 |
| % Identity | 16% | Template | c2i2xD_ |
| PDB info |
PDB header:transferase | Chain: D: PDB Molecule:methyltransferase 1; |
PDBTitle: crystal structure of methanol:cobalamin methyltransferase complex2 mtabc from methanosarcina barkeri
|
| Resolution | 2.50 Å |
|
 |
|   |   |
2 | . | . | . | . | . | . | . | 10 | . | . | |
. | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
| Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
| . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |
|  |  |  |  |
|
|
|
|
|
|
|  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
S | A | S | A | L | V | C | L | A | P | G | . |
S | E | E | T | E | A | V | T | T | I | D | L | L | V | R | G | G | I | K | V | T | T | A | S | V | A | S | D | G | N | L | A | I | T | C | S | R | G | V | K | L | L | A | D | A | P | L | V | E | V | A | D | G | E | Y | D | V | I | V | L | P | G | G | I | K | G | A | E |
| Query Conservation |   |
  |
|
|
|   |
|
|
|   |   |
| . |
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |
|
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|   |
|
|   |   |   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
| Template Conservation |   |
  |   |   |
|
|
|   |
|   |   |
|
|   |
|   |
|
|   |   |
|
|   |   |   |
|   |   |   |
|   |   |
|   | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
|
|   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |
|
|
|
|   |   |   |   |   |   | . |
| Template Sequence |   |
K | G | T | V | V | C | H | V | A | E | G | D | V | H | D | I | G | K | N | I | V | T | A | L | L | R | A | N | G | Y | N | V | V | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
D | L | G | R | D | V | P | A | E | E | V | L | A | A | V | Q | K | E | K | P | I | M | L | T | G | T | A | L | M | T | T | T | . |
| Template Known Secondary structure |   |
S |
|  |  |  |  |  |  |  | T | T |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |
| T |  |  |  |  |  |  |  |  |  |  |
|
| S |  |  |  |  |  |
|
| S | T | T | T | . |
| Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
| . |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
123 | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | |
|   |
|   |   |
81 | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . |
| Predicted Secondary structure |   |
 |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
C | F | R | D | S | T | L | L | V | E | T | V | K | Q | F | H | R | S | G | R | I | V | A | A | I | C | A | A | P | A | T |
| Query Conservation |   |
  |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |
|   |   |
| Alig confidence |   |
. | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
. | . | . | . |   |   |   |   |   |   |   |
|   |   |
|
|   |   |
|   |   |   |   |
|   |
|
|
|   |   |   |
| Template Sequence |   |
. |
. |
. |
. |
M | Y | A | F | K | E | V | N | D | M | L | L | E | N | G | I | K | I | P | F | A | C | G | G | G | A | V |
| Template Known Secondary structure |   |
. | . | . | . | T | T |  |  |  |  |  |  |  |  |  |  | T | T | T |
|
|
|
|  |  |  |  |
| T | T |
|
| Template Predicted Secondary structure |   |
. | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|
|
|
|
188 | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|