3 c3polA_ Probab=100.00  E-value=5.9e-43  Score=261.57  Aligned_columns=247  Identities=46%

Q ss_pred             CEEEEEEECCCCCCCCCCCEEEEECCEEHHHHHHHHHHHCC-CCEEEEECCHHHHHHHHHHCCCEEEEECCCCCCCCHHH
Q ss_conf             90899981788899999710343685656989999998489-98999987947999999864980999748655410279
Q batch____         1 MSFVVIIPARYASTRLPGKPLVDINGKPMIVHVLERARESG-AERIIVATDHEDVARAVEAAGGEVCMTRADHQSGTERL   79 (248)
Q Consensus         1 m~~~~iI~a~g~stR~~~K~L~~i~Gkpli~~~i~~l~~~g-i~~ivVv~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~   79 (248)
                      |+. +||+|||+||||++|||++|+|||||+|++++|.++| ++.|+|++.++++...+..++.++....++...++.++
T Consensus        10 ~~~-vIi~A~~~s~Rl~~K~Ll~v~Gkpli~~~i~~l~~~~~~~~iiVv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (262)
T c3polA_          10 MKH-IVIPARFSSSRLPGKPLLLIHDRPMILRVVDQAKKVEGFDDLCVATDDERIAEICRAEGVDVVLTSADHPSGTDRL   88 (262)
T ss_dssp             CEE-EEEECCSCCTTSTTGGGSEETTEEHHHHHHHHHTTCCSCSEEEEEESCHHHHHHHHTTTCEEEECCSCCCCHHHHH
T ss_pred             CEE-EEEECCCCCCCCCCCEEEEECCEEHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHCCCCEEEECCCCCCCHHHH
T ss_conf             759-9994487788998711443685657999999998489982899976958889999753994999648876512689


Q ss_pred             HHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHC-CCCEEEEEEEECCHHHCCCCCCEEEEECCCCCEEEEEEC
Q ss_conf             9999985226997899924752055867999999999855-996999988701713404668518998289968888403
Q batch____        80 AEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQR-QVGMATLAVPIHNAEEAFNPNAVKVVLDAEGYALYFSRA  158 (248)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  158 (248)
                      ...+..+.....+.++++.+++||++++.+..+++.+... .........+..++..++++....++.+.+|.+..+.++
T Consensus        89 ~~~~~~~~~~~~d~~~~~~~d~p~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  168 (262)
T c3polA_          89 SEVARIKGWDADDIIVNVQGDEPLLPAQLVQQVAKLLVDKPNCSMSTLCEPIHALDEFQRDSIVKVVMSKQNEALYFSRA  168 (262)
T ss_dssp             HHHHHHHTCCTTCEEEECCTTCTTCCHHHHHHHHHHHHHCTTCSEEEEEEECCCHHHHHCTTSCEEEECSSSBEEEEESS
T ss_pred             HHHHHHHCCCCCCEEEEEECCCEEECHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHCCCCCCEEEEECCCCCEEEEECC
T ss_conf             99998500468988999828953335999999999999769935756445404876706777128998689958773023


Q ss_pred             CCCCCCCCHHHHHHCCCCCCEEECCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHH
Q ss_conf             54332210022321034320110002220088886642268862012234778999968982699980772023689999
Q batch____       159 TIPWDRDRFAEGLETVGDNFLRHLGIYGYRAGFIRRYVNWQPSPLEHIEMLEQLRVLWYGEKIHVAVAQEVPGTGVDTPE  238 (248)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~~~~~~~~~~~~~~~~~l~~i~~g~~v~~~~~~~~~~~~Idtpe  238 (248)
                      +..+...............++.++|+|.|....+..+.....++++..+.++++++++.|.+|.++.+++..|++||||+
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~e~~~~~~~l~~i~~g~~v~~~~~~~~~~~dIdtpe  248 (262)
T c3polA_         169 TIPYDRDGAKRDEPTLHTQAFRHLGLYAYRVSLLQEYVTWEMGKLEKLESLEQLRVLENGHRIAIAVAEANLPPGVDTQA  248 (262)
T ss_dssp             CCSCCSSSSSSSSCCCCSCCEEEEEEEEEEHHHHHHHTTSCCCHHHHHHTCTTHHHHHTTCCEEEEECSSCCCCCCCSHH
T ss_pred             CCCCCCCCCHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHH
T ss_conf             44222221012322012101211121332299999876048762013445778999968980699981620200688999


Q ss_pred             HHHHHHHHHC
Q ss_conf             9999999709
Q batch____       239 DLERVRAEMR  248 (248)
Q Consensus       239 DL~~ae~~lk  248 (248)
                      ||++||++|+
T Consensus       249 DL~~ae~l~~  258 (262)
T c3polA_         249 DLDRLNNMPV  258 (262)
T ss_dssp             HHHHHHTSCG
T ss_pred             HHHHHHHHHH
T ss_conf             9999999953