BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (672 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P23482 Hydrogenase-4 component B n=69 Tax=Bacteria RepI... 1333 0.0 UniRef50_C6CN10 NADH/Ubiquinone/plastoquinone (Complex I) n=15 T... 713 0.0 UniRef50_Q8R9B0 Formate hydrogenlyase subunit 3/Multisubunit Na+... 544 e-153 UniRef50_C7MLM1 Formate hydrogenlyase subunit 3/multisubunit Na+... 538 e-151 UniRef50_D0WGR4 Hydrogenase subunit n=1 Tax=Slackia exigua ATCC ... 526 e-147 UniRef50_Q1Z852 NADH dehydrogenase subunit N n=3 Tax=Vibrionacea... 483 e-134 UniRef50_Q0W2B5 Hydrogenase, membrane subunit 4-like protein (Hy... 408 e-112 UniRef50_B1ZSE3 NADH dehydrogenase (Quinone) n=1 Tax=Opitutus te... 385 e-105 UniRef50_Q609T5 Hydrogenase subunit n=1 Tax=Methylococcus capsul... 371 e-101 UniRef50_C8PJ79 ATP-binding protein n=1 Tax=Campylobacter gracil... 369 e-100 UniRef50_Q1PZK0 Similar to membrane-bound [NiFe]-hydrogenase-3, ... 365 2e-99 UniRef50_B2V8R6 NADH dehydrogenase (Quinone) n=1 Tax=Sulfurihydr... 358 5e-97 UniRef50_A7GWM7 ATP-binding protein n=4 Tax=Epsilonproteobacteri... 356 2e-96 UniRef50_C8W236 Hydrogenase, membrane subunit n=1 Tax=Desulfotom... 354 8e-96 UniRef50_Q0F380 NADH dehydrogenase subunit N n=1 Tax=Mariprofund... 348 4e-94 UniRef50_B8I2P9 NADH/Ubiquinone/plastoquinone (Complex I) n=2 Ta... 347 7e-94 UniRef50_A0RMA9 Hydrogenase 4 membrane subunit n=2 Tax=Campyloba... 345 5e-93 UniRef50_Q6APE8 Probable hydrogenase, component B-formate hydrog... 344 6e-93 UniRef50_A5G8U2 NADH dehydrogenase (Quinone) n=13 Tax=Desulfurom... 342 4e-92 UniRef50_C0QBF3 HyfB n=1 Tax=Desulfobacterium autotrophicum HRM2... 341 5e-92 UniRef50_B8FUM3 NADH dehydrogenase (Quinone) n=3 Tax=Desulfitoba... 336 2e-90 UniRef50_B6AS28 NADH dehydrogenase (Quinone) n=3 Tax=Leptospiril... 331 6e-89 UniRef50_P16429 Formate hydrogenlyase subunit 3 n=77 Tax=Bacteri... 330 1e-88 UniRef50_B5QVA0 Formate hydrogenlyase subunit 3 n=43 Tax=Enterob... 328 3e-88 UniRef50_A1RWL8 NADH dehydrogenase (Quinone) n=1 Tax=Thermofilum... 320 1e-85 UniRef50_Q12F20 NADH dehydrogenase (Quinone) n=37 Tax=Betaproteo... 319 3e-85 UniRef50_A5FPH4 NADH dehydrogenase (Quinone) n=5 Tax=Dehalococco... 318 4e-85 UniRef50_D1RUK6 NADH dehydrogenase (Quinone) n=1 Tax=Serratia od... 317 8e-85 UniRef50_A8GEJ3 NADH dehydrogenase (Quinone) n=2 Tax=Enterobacte... 312 2e-83 UniRef50_A6Q6W0 Ni-Fe hydrogenase, membrane subunit HycC/HyfB n=... 312 2e-83 UniRef50_C7LSU3 NADH dehydrogenase (Quinone) n=2 Tax=Bacteria Re... 311 4e-83 UniRef50_A6UVK0 NADH dehydrogenase (Quinone) n=2 Tax=cellular or... 311 5e-83 UniRef50_Q21AT7 NADH dehydrogenase (Quinone) n=16 Tax=Alphaprote... 311 6e-83 UniRef50_C4UKF4 NADH dehydrogenase (Quinone) n=1 Tax=Yersinia ru... 309 2e-82 UniRef50_D0ZDU7 Formate hydrogenlyase subunit 3 n=2 Tax=Edwardsi... 308 4e-82 UniRef50_B3E6C5 NADH dehydrogenase (Quinone) n=4 Tax=Desulfuromo... 307 8e-82 UniRef50_B1ZSD9 NADH dehydrogenase (Quinone) n=2 Tax=Bacteria Re... 305 5e-81 UniRef50_A9QPJ4 Formate hydrogenlyase subunit 3 n=1 Tax=Methylac... 302 2e-80 UniRef50_A7HGW4 NADH dehydrogenase (Quinone) n=4 Tax=Anaeromyxob... 300 2e-79 UniRef50_A7I7D4 NADH dehydrogenase (Quinone) n=3 Tax=Methanomicr... 299 2e-79 UniRef50_B4UA31 NADH dehydrogenase (Quinone) n=1 Tax=Hydrogenoba... 298 4e-79 UniRef50_C6MX91 NADH dehydrogenase (Quinone) n=1 Tax=Geobacter s... 297 8e-79 UniRef50_C6PUG7 NADH dehydrogenase (Quinone) n=1 Tax=Clostridium... 294 8e-78 UniRef50_UPI00003845F5 COG0651: Formate hydrogenlyase subunit 3/... 293 1e-77 UniRef50_B6WWH3 Putative uncharacterized protein n=1 Tax=Desulfo... 291 6e-77 UniRef50_D1B457 NADH/Ubiquinone/plastoquinone (Complex I) n=2 Ta... 288 3e-76 UniRef50_C6NX32 Hydrogenase-4 component B / Formate hydrogenlyas... 280 2e-73 UniRef50_Q2FKT7 NADH dehydrogenase (Quinone) n=1 Tax=Methanospir... 278 5e-73 UniRef50_C8XAR9 NADH/Ubiquinone/plastoquinone (Complex I) n=1 Ta... 264 7e-69 UniRef50_B2HHH3 Oxidoreductase n=6 Tax=Mycobacterium RepID=B2HHH... 261 4e-68 UniRef50_B5EKJ3 NADH dehydrogenase (Quinone) n=2 Tax=Acidithioba... 260 1e-67 UniRef50_C5A2R1 Formate hydrogenlyase II subunit D (Mhy2D) n=1 T... 257 1e-66 UniRef50_B8IYV9 NADH dehydrogenase (Quinone) n=3 Tax=Desulfovibr... 249 2e-64 UniRef50_C6HXN7 NADH/Ubiquinone/plastoquinone (Complex I) (Fragm... 244 8e-63 UniRef50_Q2RXM5 NADH dehydrogenase (Quinone) n=1 Tax=Rhodospiril... 243 2e-62 UniRef50_Q10880 Uncharacterized protein Rv0083/MT0090 n=15 Tax=M... 236 2e-60 UniRef50_B6YTW6 Hydrogenase 4, component B or formate hydrogen l... 236 2e-60 UniRef50_A1SQ81 NADH dehydrogenase (Quinone) n=2 Tax=Actinomycet... 231 5e-59 UniRef50_Q9UYN2 Hydrogenase 4, component B or formate hydrogen l... 228 6e-58 UniRef50_B5YKQ9 Hydrogenase 4, component B or formate hydrogen l... 226 1e-57 UniRef50_C6HVM9 Putative formate hydrogenlyase subunit 3 (HyfB) ... 224 6e-57 UniRef50_B6YWP6 Hydrogenase 4, subunit 3 n=3 Tax=Thermococcus Re... 219 4e-55 UniRef50_Q21TB8 NADH dehydrogenase (Quinone) n=2 Tax=Proteobacte... 203 1e-50 UniRef50_A6TVL4 NADH dehydrogenase (Quinone) n=2 Tax=Alkaliphilu... 203 1e-50 UniRef50_Q3AB32 Carbon monoxide-induced hydrogenase, membrane an... 201 6e-50 UniRef50_B6YT76 Hydrogenase 4, component B or formate hydrogen l... 199 2e-49 UniRef50_B2A694 NADH dehydrogenase (Quinone) n=1 Tax=Natranaerob... 199 2e-49 UniRef50_A1ASR6 NADH dehydrogenase (Quinone) n=1 Tax=Pelobacter ... 199 4e-49 UniRef50_B2A3T0 NADH dehydrogenase (Quinone) n=2 Tax=Clostridia ... 199 4e-49 UniRef50_C5A3D6 Formate hydrogenlyase I subunit D (Mhy1D) n=2 Ta... 198 7e-49 UniRef50_A7HGW3 NADH dehydrogenase (Quinone) n=4 Tax=Anaeromyxob... 195 4e-48 UniRef50_A8JYL0 Formate hydrogenlyase subunit D n=1 Tax=Thermoco... 192 5e-47 UniRef50_B8DNI8 NADH dehydrogenase (Quinone) n=4 Tax=Desulfovibr... 191 6e-47 UniRef50_Q2RUH4 NADH dehydrogenase (Quinone) n=3 Tax=Alphaproteo... 188 5e-46 UniRef50_A1RWL4 NADH dehydrogenase (Quinone) n=1 Tax=Thermofilum... 187 1e-45 UniRef50_Q9UYP1 Hydrogenase 4, component F or formate hydrogen l... 182 3e-44 UniRef50_B8J2B7 NADH dehydrogenase (Quinone) n=2 Tax=Desulfovibr... 182 4e-44 UniRef50_D1JBE0 Putative NADH-quinone oxidoreductase, subunit M ... 181 6e-44 UniRef50_D1Z235 Putative NADH:ubiquinone dehydrogenase n=1 Tax=M... 179 3e-43 UniRef50_B6YWQ6 Hydrogenase 4, subunit 3 n=2 Tax=Thermococcus Re... 175 4e-42 UniRef50_Q895D8 Sodium/proton antiporter shaA n=1 Tax=Clostridiu... 175 5e-42 UniRef50_A2SS19 Membrane bound hydrogenase subunit mbhH n=3 Tax=... 173 2e-41 UniRef50_B9LA03 CooM n=1 Tax=Nautilia profundicola AmH RepID=B9L... 173 2e-41 UniRef50_C0GJ41 NADH dehydrogenase (Quinone) n=1 Tax=Dethiobacte... 172 3e-41 UniRef50_B6YTY8 Membrane bound hydrogenase, MbhH subunit n=9 Tax... 172 4e-41 UniRef50_B6YTX9 Hydrogenase 4, component F or formate hydrogen l... 172 5e-41 UniRef50_B1ZRS2 Proton-translocating NADH-quinone oxidoreductase... 171 6e-41 UniRef50_Q2RXM0 NADH dehydrogenase (Quinone) n=1 Tax=Rhodospiril... 170 2e-40 UniRef50_C6A3Z7 Membrane-bound hydrogenase MBH 2, subunit Mbh2H ... 169 3e-40 UniRef50_Q0W2B8 Hydrogenase, membrane subunit 1-like protein (Ec... 169 4e-40 UniRef50_A6TVL5 NADH dehydrogenase (Quinone) n=1 Tax=Alkaliphilu... 168 6e-40 UniRef50_A9A3Z6 Proton-translocating NADH-quinone oxidoreductase... 168 6e-40 UniRef50_C1TPN6 Formate hydrogenlyase subunit 3/multisubunit Na+... 167 9e-40 UniRef50_B9DJY9 Putative NADH dehydrogenase I chain L n=1 Tax=St... 166 2e-39 UniRef50_A1AUV4 NADH dehydrogenase (Quinone) n=2 Tax=Pelobacter ... 165 5e-39 UniRef50_C0GDB1 NADH dehydrogenase (Quinone) n=2 Tax=Dethiobacte... 165 6e-39 UniRef50_C5CEV1 NADH/Ubiquinone/plastoquinone (Complex I) n=1 Ta... 165 6e-39 UniRef50_C4V3R7 NADH dehydrogenase (Quinone) n=1 Tax=Selenomonas... 164 1e-38 UniRef50_C0GJ36 NADH dehydrogenase (Quinone) n=2 Tax=Dethiobacte... 163 2e-38 UniRef50_B2V8R3 NADH dehydrogenase (Quinone) n=1 Tax=Sulfurihydr... 162 3e-38 UniRef50_A1JTZ4 Hydrogenase-4 component F n=19 Tax=Bacteria RepI... 162 3e-38 UniRef50_C7Q1G6 NADH dehydrogenase (Quinone) n=2 Tax=Actinomycet... 162 4e-38 UniRef50_B8I2P6 NADH/Ubiquinone/plastoquinone (Complex I) n=2 Ta... 160 1e-37 UniRef50_C8X0Y5 NADH/Ubiquinone/plastoquinone (Complex I) n=26 T... 160 2e-37 UniRef50_Q12ZH4 Na+/H+ antiporter subunit n=2 Tax=Methanosarcina... 159 3e-37 UniRef50_C9RKX6 Proton-translocating NADH-quinone oxidoreductase... 159 4e-37 UniRef50_C5A2R2 Formate hydrogenlyase II subunit C' (Mhy2C2) n=1... 158 7e-37 UniRef50_C6LML6 Sodium/proton antiporter ShaA (Fragment) n=5 Tax... 158 7e-37 UniRef50_B9XHI6 Proton-translocating NADH-quinone oxidoreductase... 157 1e-36 UniRef50_B2A693 Proton-translocating NADH-quinone oxidoreductase... 157 2e-36 UniRef50_B6YTW5 NADH dehydrogenase (Quinone) n=1 Tax=Thermococcu... 156 2e-36 UniRef50_Q1AVJ0 Proton-translocating NADH-quinone oxidoreductase... 155 5e-36 UniRef50_A8RP33 Putative uncharacterized protein n=1 Tax=Clostri... 155 6e-36 UniRef50_D2LKE4 NADH/Ubiquinone/plastoquinone (Complex I) n=2 Ta... 154 8e-36 UniRef50_C0YTV8 NADH dehydrogenase I chain L n=1 Tax=Chryseobact... 154 1e-35 UniRef50_A0L9R8 NADH dehydrogenase (Quinone) n=1 Tax=Magnetococc... 154 1e-35 UniRef50_C0GJ30 NADH dehydrogenase (Quinone) n=1 Tax=Dethiobacte... 153 2e-35 UniRef50_C8NL94 NADH dehydrogenase (Quinone) n=18 Tax=Bacteria R... 153 3e-35 UniRef50_Q04YB3 NADH dehydrogenase (Ubiquinone), L chain n=7 Tax... 152 3e-35 UniRef50_C5A4Q0 Membrane bound oxidoreductase, MbxH' subunit (Mb... 152 3e-35 UniRef50_C0Q995 MnhA2 n=1 Tax=Desulfobacterium autotrophicum HRM... 152 4e-35 UniRef50_Q2RXM6 NADH dehydrogenase (Quinone) n=1 Tax=Rhodospiril... 152 5e-35 UniRef50_Q6APF1 Probable hydrogenase, component F-formate hydrog... 151 6e-35 UniRef50_Q11VC3 NADH dehydrogenase I chain L n=5 Tax=Bacteroidet... 151 7e-35 UniRef50_C0Z765 NADH-quinone oxidoreductase chain L n=2 Tax=Baci... 150 1e-34 UniRef50_C5EMF1 NADH dehydrogenase n=2 Tax=Clostridiales RepID=C... 150 1e-34 UniRef50_D0L1N8 NADH/Ubiquinone/plastoquinone (Complex I) n=3 Ta... 150 2e-34 UniRef50_B5IUC0 NADH-Ubiquinone/plastoquinone (Complex I), domai... 150 2e-34 UniRef50_B1ZSF1 NADH dehydrogenase (Quinone) n=1 Tax=Opitutus te... 150 2e-34 UniRef50_A1ALQ0 Proton-translocating NADH-quinone oxidoreductase... 150 2e-34 UniRef50_A7BZE9 NADH dehydrogenase subunit N n=3 Tax=Gammaproteo... 150 2e-34 UniRef50_Q0W6M6 Predicted oxidoreductase integral membrane compo... 150 2e-34 UniRef50_C1A8Y3 NADH-quinone oxidoreductase chain L n=1 Tax=Gemm... 150 2e-34 UniRef50_B3QXL9 Proton-translocating NADH-quinone oxidoreductase... 149 3e-34 UniRef50_P77437 Hydrogenase-4 component F n=52 Tax=Bacteria RepI... 149 3e-34 UniRef50_Q24ST7 Hydrogenase-4 component F n=3 Tax=Desulfitobacte... 149 4e-34 UniRef50_C5VLQ3 NADH dehydrogenase subunit 5 n=10 Tax=Bacteroida... 149 5e-34 UniRef50_A8RP35 Putative uncharacterized protein n=1 Tax=Clostri... 148 6e-34 UniRef50_C1SM60 NADH dehydrogenase subunit L n=1 Tax=Denitrovibr... 148 6e-34 UniRef50_Q7NHD8 NADH dehydrogenase subunit 5 n=1 Tax=Gloeobacter... 148 8e-34 UniRef50_A7GV43 Proton-translocating NADH-quinone oxidoreductase... 147 1e-33 UniRef50_A9BJM0 NADH dehydrogenase (Quinone) n=1 Tax=Petrotoga m... 147 1e-33 UniRef50_A4E716 Putative uncharacterized protein n=1 Tax=Collins... 147 1e-33 UniRef50_B1ZUJ9 NADH dehydrogenase (Quinone) n=6 Tax=Bacteria Re... 147 1e-33 UniRef50_A6LXP7 Proton-translocating NADH-quinone oxidoreductase... 147 1e-33 UniRef50_C5NVG1 Na(+)/H(+) antiporter subunit A n=1 Tax=Gemella ... 147 2e-33 UniRef50_B6YQ51 NADH dehydrogenase I subunit L n=32 Tax=Bacteroi... 146 2e-33 UniRef50_Q9V0S9 NuoM NADH dehydrogenase I, subunit M n=3 Tax=Pyr... 146 3e-33 UniRef50_B1L375 NADH:ubiquinone oxidoreductase subunit 4 (Chain ... 146 3e-33 UniRef50_B2KDU2 NADH dehydrogenase (Quinone) n=1 Tax=Elusimicrob... 145 6e-33 UniRef50_D2BHY2 NADH:quinone oxidoreductase subunit 5 (Chain L) ... 144 1e-32 UniRef50_C8W239 Hydrogenase 4, membrane subunit n=1 Tax=Desulfot... 144 1e-32 UniRef50_A1ALK0 NADH dehydrogenase (Quinone) n=2 Tax=Pelobacter ... 144 1e-32 UniRef50_B9LUW7 NADH/Ubiquinone/plastoquinone (Complex I) n=13 T... 144 1e-32 UniRef50_B4UA28 NADH dehydrogenase (Quinone) n=1 Tax=Hydrogenoba... 144 1e-32 UniRef50_B1LCD4 NADH dehydrogenase (Quinone) n=6 Tax=Thermotogac... 144 2e-32 UniRef50_B0K5U2 NADH dehydrogenase (Quinone) n=6 Tax=Thermoanaer... 143 2e-32 UniRef50_B1ZUJ7 NADH dehydrogenase (Quinone) n=1 Tax=Opitutus te... 143 2e-32 UniRef50_A0LST9 NADH/Ubiquinone/plastoquinone (Complex I) n=1 Ta... 143 2e-32 UniRef50_P31971 NAD(P)H-quinone oxidoreductase chain 5 n=25 Tax=... 143 2e-32 UniRef50_B0KD08 NADH dehydrogenase (Quinone) n=6 Tax=Thermoanaer... 142 3e-32 UniRef50_B8D5B8 Formate hydrogenlyase subunit 3/Multisubunit Na+... 142 4e-32 UniRef50_A9F578 NADH dehydrogenase I chain M n=1 Tax=Sorangium c... 142 4e-32 UniRef50_B5EN60 Proton-translocating NADH-quinone oxidoreductase... 142 5e-32 UniRef50_B5IC99 NADH-Ubiquinone/plastoquinone (Complex I), domai... 142 5e-32 UniRef50_B4SLF9 NADH dehydrogenase (Quinone) n=20 Tax=cellular o... 142 5e-32 UniRef50_B0BZT2 Proton-translocating NAD(P)H-quinone oxidoreduct... 142 5e-32 UniRef50_C1XWY3 Formate hydrogenlyase subunit 3/multisubunit Na+... 141 6e-32 UniRef50_D2RZ77 Proton-translocating NADH-quinone oxidoreductase... 141 7e-32 UniRef50_A7ZBL2 Hydrogenase-4 component F n=6 Tax=Epsilonproteob... 141 7e-32 UniRef50_B5IAP3 NADH-Ubiquinone/plastoquinone (Complex I), domai... 141 9e-32 UniRef50_A6UFL0 NADH dehydrogenase (Quinone) n=7 Tax=Proteobacte... 141 1e-31 UniRef50_D2QSX4 Proton-translocating NADH-quinone oxidoreductase... 141 1e-31 UniRef50_Q2C5U2 NADH-plastoquinone oxidoreductase, chain 5 n=2 T... 140 1e-31 UniRef50_B1KJV8 Proton-translocating NADH-quinone oxidoreductase... 140 1e-31 UniRef50_B9ZEN4 Proton-translocating NADH-quinone oxidoreductase... 140 1e-31 UniRef50_D2LPZ8 NADH/Ubiquinone/plastoquinone (Complex I) n=3 Ta... 140 1e-31 UniRef50_D1Y0I6 Putative NADH dehydrogenase subunit L n=1 Tax=Pr... 140 1e-31 UniRef50_A6Q8K1 NADH-quinone oxidoreductase, chain M n=3 Tax=Eps... 140 2e-31 UniRef50_A4YHZ0 NADH dehydrogenase (Quinone) n=2 Tax=cellular or... 140 2e-31 UniRef50_C0GJ39 NADH dehydrogenase (Quinone) n=1 Tax=Dethiobacte... 140 2e-31 UniRef50_B2ULN9 Proton-translocating NADH-quinone oxidoreductase... 140 2e-31 UniRef50_C7MLM5 Formate hydrogenlyase subunit 3/multisubunit Na+... 139 3e-31 UniRef50_Q1IZW2 NADH-quinone oxidoreductase, L subunit n=3 Tax=D... 139 3e-31 UniRef50_Q2RTW1 NADH dehydrogenase (Quinone) n=3 Tax=Proteobacte... 139 3e-31 UniRef50_Q49W91 Na(+)/H(+) antiporter subunit A1 n=19 Tax=Bacill... 139 3e-31 UniRef50_B3DZT2 NADH dehydrogenase subunit L n=2 Tax=Verrucomicr... 139 4e-31 UniRef50_C7RA71 NADH dehydrogenase (Quinone) n=4 Tax=Proteobacte... 139 4e-31 UniRef50_C8SB86 NADH dehydrogenase (Quinone) n=1 Tax=Ferroglobus... 139 4e-31 UniRef50_A6Q8K0 NADH-quinone oxidoreductase, chain L n=2 Tax=Eps... 139 5e-31 UniRef50_B2V982 Proton-translocating NADH-quinone oxidoreductase... 139 5e-31 UniRef50_B3QY40 Proton-translocating NADH-quinone oxidoreductase... 139 5e-31 UniRef50_A0AL63 Complete genome n=20 Tax=Bacillales RepID=A0AL63... 138 6e-31 UniRef50_Q9RGZ5 Na(+)/H(+) antiporter subunit A n=9 Tax=Firmicut... 138 7e-31 UniRef50_Q649J3 NADH dehydrogenase/oxidoreductase n=4 Tax=Archae... 138 7e-31 UniRef50_Q2IN04 Proton-translocating NADH-quinone oxidoreductase... 138 8e-31 UniRef50_Q1NS05 NADH dehydrogenase (Quinone) n=1 Tax=delta prote... 138 8e-31 UniRef50_C6D5D4 Proton-translocating NADH-quinone oxidoreductase... 138 9e-31 UniRef50_B3QY39 Proton-translocating NADH-quinone oxidoreductase... 137 1e-30 UniRef50_Q895D9 Sodium/proton antiporter shaA n=1 Tax=Clostridiu... 137 1e-30 UniRef50_D2R5F8 Proton-translocating NADH-quinone oxidoreductase... 137 1e-30 UniRef50_Q1NS06 NADH dehydrogenase (Quinone) n=2 Tax=delta prote... 137 2e-30 UniRef50_B3EIA1 Proton-translocating NADH-quinone oxidoreductase... 137 2e-30 UniRef50_B2KDU4 NADH dehydrogenase (Quinone) n=1 Tax=Elusimicrob... 136 2e-30 UniRef50_D2SDG3 Proton-translocating NADH-quinone oxidoreductase... 136 2e-30 UniRef50_Q67KP4 NADH dehydrogenase I subunit L n=1 Tax=Symbiobac... 136 2e-30 UniRef50_A7HHY8 Proton-translocating NADH-quinone oxidoreductase... 135 3e-30 UniRef50_C9RJK6 Proton-translocating NADH-quinone oxidoreductase... 135 4e-30 UniRef50_Q1IS54 Proton-translocating NADH-quinone oxidoreductase... 135 4e-30 UniRef50_C5CHQ8 NADH/Ubiquinone/plastoquinone (Complex I) n=1 Ta... 135 5e-30 UniRef50_Q12ZH7 Na+/H+ antiporter subunit n=2 Tax=Methanosarcina... 135 5e-30 UniRef50_B2IHV5 Proton-translocating NADH-quinone oxidoreductase... 135 5e-30 UniRef50_B1I6I4 NADH dehydrogenase (Quinone) n=1 Tax=Candidatus ... 135 6e-30 UniRef50_Q3AH00 Proton-translocating NADH-quinone oxidoreductase... 135 6e-30 UniRef50_A5UVF8 Proton-translocating NADH-quinone oxidoreductase... 135 6e-30 UniRef50_B8J1C9 Proton-translocating NADH-quinone oxidoreductase... 135 7e-30 UniRef50_A6UVJ7 NADH dehydrogenase (Quinone) n=1 Tax=Methanococc... 135 7e-30 UniRef50_B8DS12 NADH dehydrogenase (Quinone) n=2 Tax=Desulfovibr... 134 8e-30 UniRef50_B8CXD7 NADH dehydrogenase I subunit L n=1 Tax=Halotherm... 134 1e-29 UniRef50_Q73G56 Na+/H+ antiporter subunit, putative n=9 Tax=Wolb... 134 1e-29 UniRef50_C4LLM4 Na(+)/H(+) antiporter subunit n=3 Tax=Corynebact... 134 1e-29 UniRef50_Q9HJK6 NADH dehydrogenase, chain L related protein n=6 ... 134 1e-29 UniRef50_B1WQD4 NADH dehydrogenase subunit 5 n=9 Tax=Cyanobacter... 134 1e-29 UniRef50_C8SB88 NADH dehydrogenase (Quinone) n=5 Tax=Archaea Rep... 134 1e-29 UniRef50_B5YL25 NADH-ubiquinone/plastoquinone n=1 Tax=Thermodesu... 134 1e-29 UniRef50_Q6GBK7 Putative antiporter subunit mnhA2 n=63 Tax=Staph... 134 1e-29 UniRef50_C0A9K9 NADH dehydrogenase (Quinone) n=1 Tax=Opitutaceae... 134 2e-29 UniRef50_A3DNF9 Membrane bound hydrogenase subunit mbhH n=1 Tax=... 133 2e-29 UniRef50_A1AUV3 NADH dehydrogenase (Quinone) n=2 Tax=Pelobacter ... 133 2e-29 UniRef50_C6W0W0 Proton-translocating NADH-quinone oxidoreductase... 133 2e-29 UniRef50_A9B485 Proton-translocating NADH-quinone oxidoreductase... 133 3e-29 UniRef50_A4XV13 Proton-translocating NADH-quinone oxidoreductase... 133 3e-29 UniRef50_Q35099 NADH-ubiquinone oxidoreductase chain 5 n=58 Tax=... 132 3e-29 UniRef50_C7R7H2 Proton-translocating NADH-quinone oxidoreductase... 132 3e-29 UniRef50_A4X1Y8 Proton-translocating NADH-quinone oxidoreductase... 132 3e-29 UniRef50_C8XH11 NADH/Ubiquinone/plastoquinone (Complex I) n=1 Ta... 132 4e-29 UniRef50_B8FRJ9 Proton-translocating NADH-quinone oxidoreductase... 132 4e-29 UniRef50_B5YKJ0 NADH-quinone oxidoreductase chain l n=1 Tax=Ther... 132 4e-29 UniRef50_Q1NS07 NADH dehydrogenase (Quinone) n=2 Tax=delta prote... 132 5e-29 UniRef50_Q0ARA4 NADH dehydrogenase (Quinone) n=3 Tax=Hyphomonada... 132 5e-29 UniRef50_Q1RKE5 NADH-quinone oxidoreductase subunit M n=17 Tax=R... 132 6e-29 UniRef50_Q55429 NAD(P)H-quinone oxidoreductase chain 5 n=19 Tax=... 131 7e-29 UniRef50_D0LZ05 Proton-translocating NADH-quinone oxidoreductase... 131 7e-29 UniRef50_A7HXD8 NADH dehydrogenase (Quinone) n=2 Tax=Bacteria Re... 131 7e-29 UniRef50_C7NUN0 Proton-translocating NADH-quinone oxidoreductase... 131 8e-29 UniRef50_B1ZA34 Proton-translocating NADH-quinone oxidoreductase... 131 8e-29 UniRef50_Q9RGZ2 Na(+)/H(+) antiporter subunit D n=3 Tax=Firmicut... 131 8e-29 UniRef50_Q1NWP0 NADH dehydrogenase (Quinone) n=2 Tax=Deltaproteo... 131 9e-29 UniRef50_Q3Z7Z2 Proton-translocating NADH-quinone oxidoreductase... 131 1e-28 UniRef50_B8CK34 NADH-ubiquinone oxidoreductase subunit, putative... 131 1e-28 >UniRef50_P23482 Hydrogenase-4 component B n=69 Tax=Bacteria RepID=HYFB_ECOLI Length = 672 Score = 1333 bits (3451), Expect = 0.0, Method: Compositional matrix adjust. Identities = 672/672 (100%), Positives = 672/672 (100%) Query: 1 MDALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTL 60 MDALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTL Sbjct: 1 MDALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTL 60 Query: 61 VARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNI 120 VARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNI Sbjct: 61 VARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNI 120 Query: 121 FIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMI 180 FIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMI Sbjct: 121 FIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMI 180 Query: 181 AFLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPS 240 AFLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPS Sbjct: 181 AFLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPS 240 Query: 241 HASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDI 300 HASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDI Sbjct: 241 HASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDI 300 Query: 301 KRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAG 360 KRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAG Sbjct: 301 KRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAG 360 Query: 361 AIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRV 420 AIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRV Sbjct: 361 AIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRV 420 Query: 421 EAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLL 480 EAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLL Sbjct: 421 EAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLL 480 Query: 481 LAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLA 540 LAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLA Sbjct: 481 LAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLA 540 Query: 541 MPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQ 600 MPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQ Sbjct: 541 MPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQ 600 Query: 601 LDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVV 660 LDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVV Sbjct: 601 LDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVV 660 Query: 661 AALVVLLIAIAV 672 AALVVLLIAIAV Sbjct: 661 AALVVLLIAIAV 672 >UniRef50_C6CN10 NADH/Ubiquinone/plastoquinone (Complex I) n=15 Tax=Gammaproteobacteria RepID=C6CN10_DICZE Length = 679 Score = 713 bits (1841), Expect = 0.0, Method: Compositional matrix adjust. Identities = 400/657 (60%), Positives = 497/657 (75%), Gaps = 4/657 (0%) Query: 4 LQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVAR 63 LQ L SL LYL +L SL + LAI+LSG+ +L GG G+++ L G L A Sbjct: 11 LQGLGLSLALYLAGALFSLLCCRRESLAIRLSGLCALAGGCAGVLAAAPVLLGGGALTAI 70 Query: 64 FAPPFE-FADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFI 122 F PF+ FA LTLR D+L+AFM LVISLLV V +LYSL Y+ EY G+GA AMGFFMN+F+ Sbjct: 71 FDGPFDAFAHLTLRFDTLAAFMTLVISLLVTVSALYSLAYLEEYRGRGAWAMGFFMNLFV 130 Query: 123 ASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAF 182 ASMVAL+V+DNAF+FIVLFE+MSLSS+FLVIA QD +++AG+LYF IAHAGSVLIM AF Sbjct: 131 ASMVALVVVDNAFYFIVLFEVMSLSSYFLVIADQDDEAVSAGLLYFLIAHAGSVLIMAAF 190 Query: 183 LLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHA 242 L+ R S SLDFA FR SLS AS VFLLAFFGFGAKAGM+PLH WLPRAHPAAPSHA Sbjct: 191 FLLYRHSASLDFADFRHASLSAPQASVVFLLAFFGFGAKAGMLPLHGWLPRAHPAAPSHA 250 Query: 243 SALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKR 302 SALMSGVMVKIG+FGI+KV +DLL T WWG++V+A GA+S++LGVLYALAE DIKR Sbjct: 251 SALMSGVMVKIGVFGIIKVGIDLLGAT--ETWWGVVVLAFGAVSSVLGVLYALAEHDIKR 308 Query: 303 LLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAI 362 LLA+ TVEN+GIIL+ VGV M+G++ H PLL ++GLLG L+HLLNHA+FKGLLFLGAGA+ Sbjct: 309 LLAYHTVENIGIILMGVGVGMIGIATHHPLLALLGLLGGLYHLLNHAVFKGLLFLGAGAV 368 Query: 363 ISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEA 422 I R+HT DMEKMG LA+ MP TA A L+GC+AISA+PPLNGF+SEW+T+QSLF+LS Sbjct: 369 IYRVHTKDMEKMGGLARLMPRTALAFLVGCMAISALPPLNGFVSEWFTYQSLFTLSHDGG 428 Query: 423 VALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLA 482 + L+LA PIA+VMLA+TG LA MCFVK+YGI+FCGAPRS A A+EVP M VAMLLLA Sbjct: 429 IGLRLAAPIAIVMLAITGALAAMCFVKVYGISFCGAPRSEKATHAREVPWPMTVAMLLLA 488 Query: 483 ALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPG-TFHTQVTPSLLLLLLLAM 541 LCVL+ + AS ++P I IA TP +A G+ + PG + T++ L+ +LLLA+ Sbjct: 489 LLCVLLGIGASVVSPIITRIAADLAQTPAVAMAQGLGVFPGDSQQTRLNTPLIFILLLAL 548 Query: 542 PLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQL 601 PLLP + + R R FR+ G WACGYG+E AM+ S QPLRV+F+ L+R+R+ L Sbjct: 549 PLLPLMLYSLLRGPRLGFRQKGTPWACGYGYEQAMSASAGSFTQPLRVMFAPLYRVRKTL 608 Query: 602 DPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLY 658 DP + + L T A EP WD+RV+ P+VS QR+++ +Q +Q GDFR+YCLY Sbjct: 609 DPAPAMQQALEKTTQAAARAEPVWDDRVVMPLVSGVQRISRAVQWIQHGDFRVYCLY 665 >UniRef50_Q8R9B0 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit n=2 Tax=Thermoanaerobacteraceae RepID=Q8R9B0_THETN Length = 673 Score = 544 bits (1401), Expect = e-153, Method: Compositional matrix adjust. Identities = 289/676 (42%), Positives = 429/676 (63%), Gaps = 14/676 (2%) Query: 1 MDALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTL 60 M QL S+ LY+ +L SL L ++A +SG T+ + G G+ S + L G Sbjct: 2 MTVQQLFLLSIFLYVVGALISLGLNRDGKIANYVSGTTAFLAGCTGVASAVPVLIEGKGF 61 Query: 61 VARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNI 120 + F T+ +D LSAFM LVISLL + +YS++Y EY GKG MGF NI Sbjct: 62 ILEGMEFIPFGRFTINVDPLSAFMTLVISLLSIATGVYSISYQEEYIGKGTGVMGFLNNI 121 Query: 121 FIASMVALLVMDNAFWFIVLFEMMSLSSWFLV-IARQDKTSINAGMLYFFIAHAGSVLIM 179 FI SM+ ++ DNAF+F+V +E+M+L S+FLV ++++ +I AG +YF +AH G+VLIM Sbjct: 122 FIVSMILVVTSDNAFYFLVFWELMTLVSYFLVCFEQENREAIKAGFVYFVMAHVGTVLIM 181 Query: 180 IAFLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAP 239 I+F+L +G+ DFA+FR +LSP + + FLLAF GFG KAG++P H WLP+AHPAAP Sbjct: 182 ISFILFYVYTGTFDFAAFRNANLSPVIKNLAFLLAFLGFGVKAGIVPFHFWLPQAHPAAP 241 Query: 240 SHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQD 299 S+ SALMSGVM+K I+GI++V +D L WWG+ V+A GAISA+ GVLYA++E D Sbjct: 242 SNVSALMSGVMIKTAIYGIIRVGVDFLGAA--TWWWGLTVLAFGAISAVFGVLYAVSEND 299 Query: 300 IKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGA 359 +KRLLA+S++ENVGIIL+ VG M+G++ + ++G+L L+HL+NHA+FKGLLFLGA Sbjct: 300 LKRLLAYSSIENVGIILMGVGAGMMGIATGYVSVGILGILAGLYHLINHAVFKGLLFLGA 359 Query: 360 GAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSR 419 G+++ RLHT +ME+MG LA+ MPWT IG L+ISA+PPLNGF+S+W+T+ +LF++S Sbjct: 360 GSVVYRLHTRNMEEMGGLARYMPWTGLTFFIGALSISALPPLNGFVSKWFTYHTLFAVST 419 Query: 420 VEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAML 479 +V +++A P+A V LA+TG L +CFVK YG+TF G R + + +EVP TM++ M Sbjct: 420 KGSVLIRMAFPLAAVALALTGALTSLCFVKAYGVTFTGPFRGGNELKIKEVPVTMLIGMG 479 Query: 480 LLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTF-HTQVTPSLLLLLL 538 LLA C ++ L A A I ++A A + V+ G+++ P + ++ L+L+ + Sbjct: 480 LLAIGCFVLGLGAPVGAGYIANVASALLHVSSPKVSDGLSIFPASSEQAMLSTPLVLVFV 539 Query: 539 LAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLR 598 + + +LP L + +RA R + WACGY + + MA + L +FS ++ LR Sbjct: 540 VGLAILP-LLIIGTGGKRAGRRVDFEPWACGYKYSSRMAWTSTAFAHSLYPLFSPVYLLR 598 Query: 599 QQLDPTLR-----LNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFR 653 R K +A+++ E W+ + P++ + K Q Q+G+ R Sbjct: 599 TAFTEAGRFIILLFKKAMAYIS----QIELMWERYIYYPLLHFMVYIGKRAQTFQTGNVR 654 Query: 654 LYCLYVVAALVVLLIA 669 +YCLY++ L VLLIA Sbjct: 655 MYCLYIILTLGVLLIA 670 >UniRef50_C7MLM1 Formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit n=3 Tax=Bacteria RepID=C7MLM1_CRYCD Length = 672 Score = 538 bits (1387), Expect = e-151, Method: Compositional matrix adjust. Identities = 304/675 (45%), Positives = 418/675 (61%), Gaps = 34/675 (5%) Query: 1 MDALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTL 60 M A L S++ +LAS+ LA++ + ++G V G++S + + AG Sbjct: 1 MSATTLFLTSVVFSCVGALASI-------LAMRNQQASKVIGCVFGMVSALFGIAAGCQA 53 Query: 61 VARFAP------PFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAM 114 + A PF FA+ +L ++ LS ++LVIS+L +Y L Y EY+G+G M Sbjct: 54 IVGTAEWSSVVTPFSFANFSLLLNPLSGLLMLVISVLAFAAWIYGLNYFDEYKGQGLGTM 113 Query: 115 GFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAG 174 GFFMN+FIASM ++ +DNA WF+V FE+MSL+S+FLVI Q++TSI G LY +AH G Sbjct: 114 GFFMNLFIASMGFVICVDNALWFLVFFELMSLTSYFLVIVEQNETSIKGGFLYLIMAHIG 173 Query: 175 SVLIMIAFLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRA 234 LIMIAF +M +GS +F +FRT + SP ++S VF+L F GFG KAGM+P HSWLP+A Sbjct: 174 FFLIMIAFFVMAGLTGSFEFQAFRTSAFSPVISSLVFVLCFIGFGCKAGMIPFHSWLPQA 233 Query: 235 HPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYA 294 HPAAPS+ SALMSG M+KIG+FG++KV +DLL + + LWWGILV+ GA+S++LGV+YA Sbjct: 234 HPAAPSNVSALMSGGMIKIGVFGMVKVGLDLLQSSPVELWWGILVLLFGAVSSVLGVVYA 293 Query: 295 LAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGL 354 LAE DIKRLLA+ +VEN+GIILL VG+ +G+++ +P++ V+G L +HL NHA+FKGL Sbjct: 294 LAEHDIKRLLAYHSVENIGIILLGVGIGFIGVAVGNPIVAVLGFLAGFYHLFNHAMFKGL 353 Query: 355 LFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSL 414 LFLGAG+++ T +MEKMG LA+ MP TA LIG LAISAIPPLNGF+SEW+T+QS+ Sbjct: 354 LFLGAGSVLYSTGTRNMEKMGGLARVMPVTAMCFLIGSLAISAIPPLNGFVSEWFTYQSM 413 Query: 415 FSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTM 474 F+ + ++L A V LA+TG LAV CFVK YG+TF APRS A AQEVP M Sbjct: 414 FTAAFAGDAVIRLFAAFAAVSLAITGALAVTCFVKAYGVTFLSAPRSDVARNAQEVPGPM 473 Query: 475 IVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVP-GTFHTQVTPSL 533 AM L+A +CV + L A W+AP + HIA A P V +G+A V T TP + Sbjct: 474 KFAMGLIAFICVCMGLGAPWVAPIMQHIAEATVQAPSLGVTAGLANVNVSTAGVVSTPLI 533 Query: 534 LLLLLLAMPLLPGLYWLWCRSRRAAFRRTG-----DAWACGYGWENAMAPSGNGVMQPLR 588 +LL+ + L GL RA F + G D WACGY M + Sbjct: 534 AVLLIGLVGLAIGL--------RALFDKGGVDEREDPWACGYHPNAHMPVIATSFASQVN 585 Query: 589 VVFSALFRLR----QQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEI 644 + L+ R +Q D L G A+ E D+ ++ ++ ++ Sbjct: 586 MFLGPLYTARDVFSRQSDRATALFNGTVE---GAKRIEGIPDKYLVDAPARFVNWISAKV 642 Query: 645 QHLQSGDFRLYCLYV 659 Q ++ GDFRLY LY+ Sbjct: 643 QKIEGGDFRLYILYI 657 >UniRef50_D0WGR4 Hydrogenase subunit n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WGR4_9ACTN Length = 675 Score = 526 bits (1355), Expect = e-147, Method: Compositional matrix adjust. Identities = 283/607 (46%), Positives = 399/607 (65%), Gaps = 5/607 (0%) Query: 65 APPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIAS 124 A PF FAD TL ++ ++ ++ +I++L LY L+Y EY+ G AMG FMN+FIAS Sbjct: 63 ATPFSFADFTLLLNPIAGLLLAIINVLAFAAFLYGLSYFDEYKENGLGAMGLFMNLFIAS 122 Query: 125 MVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLL 184 M L+V DNAFWF+V FE+MSL+S+FLV+ Q K SI G +Y +AH G ++IMI++ + Sbjct: 123 MNVLVVADNAFWFLVFFELMSLTSYFLVVVEQKKQSIKGGFMYLVMAHVGFLMIMISYFI 182 Query: 185 MGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASA 244 M ++GS +FA++R P L S F+LAFFGFG KAGM+P HSWLP+AHPAAPS+ SA Sbjct: 183 MASQTGSFEFAAYRVHDFGPALGSLAFVLAFFGFGCKAGMVPFHSWLPQAHPAAPSNVSA 242 Query: 245 LMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLL 304 LMSG M+KIG+FGI+KV +DLL+ T LWWG+LV+ +GA+S++LGV+YAL E DIK+LL Sbjct: 243 LMSGGMIKIGVFGIIKVGLDLLSGTDCMLWWGLLVLVVGAVSSVLGVVYALGEHDIKKLL 302 Query: 305 AWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIIS 364 A+ +VEN+GIILL VG+A VG+++ P L + LL ++H+LNHA+FKGLLFLGAG+++ Sbjct: 303 AYHSVENIGIILLGVGLAFVGVAMDQPALAGLALLAGIYHMLNHAMFKGLLFLGAGSVLY 362 Query: 365 RLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVA 424 T +MEKMG L MP TA LIG LAISAIPPLNGF+SEW+T+Q++FS + + Sbjct: 363 ATGTRNMEKMGGLIHAMPVTAMCFLIGSLAISAIPPLNGFVSEWFTYQAMFSAAFMGGTM 422 Query: 425 LQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAAL 484 ++ A V LAVTG LAV CFVK YG+TF G RS A +A+EVP +M +M++L+ + Sbjct: 423 IKAFAAFAAVALAVTGALAVTCFVKAYGVTFLGVGRSDAALKAKEVPASMTASMVILSIV 482 Query: 485 CVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQV-TPSLLLLLLLAMPL 543 C+ + L A AP + +A + VASG A+ G + + TP + +LL+ A+ + Sbjct: 483 CIFLGLGAPLCAPVLEGVAASVLGGSAVAVASGAAVTNGITDSVISTPLVAVLLIAAVFV 542 Query: 544 LPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDP 603 G+ ++ + + R D WACGY E M ++ V L+ R L Sbjct: 543 ALGIRSMFAKGGSSVRR---DPWACGYKSEGDMPVIATTFASEVKWVMGPLYAARDALVG 599 Query: 604 TL-RLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAA 662 T + K + A+ E D+R++ P+ + R+AK Q +++GD RLY +Y+V A Sbjct: 600 TSPKFVKAFESLVGGAKVAETVGDKRLVDPVAAFVDRIAKLSQRIEAGDSRLYIVYIVVA 659 Query: 663 LVVLLIA 669 LV LLIA Sbjct: 660 LVALLIA 666 >UniRef50_Q1Z852 NADH dehydrogenase subunit N n=3 Tax=Vibrionaceae RepID=Q1Z852_PHOPR Length = 646 Score = 483 bits (1243), Expect = e-134, Method: Compositional matrix adjust. Identities = 281/602 (46%), Positives = 394/602 (65%), Gaps = 12/602 (1%) Query: 1 MDALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTL 60 M+ L L+ ++LI Y A+L SL ++ +++++G+ S GG+ G+++G+T + G L Sbjct: 1 MNPLILVLFALICYAIAALVSLVGRKQEQESLRIAGVISAFGGLFGVLAGLTTIVCGDDL 60 Query: 61 VARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNI 120 + + MD LSA MV+VIS++ + S+YS+ Y++EY GKG + N+ Sbjct: 61 ADKLGR-------IVNMDMLSALMVVVISVVTMAASVYSINYLKEYLGKGGWKINILFNV 113 Query: 121 FIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMI 180 F A+M AL+V N FIVL E++SL+SW +VI+ S AG+ YF H SVLIM Sbjct: 114 FAAAMTALVVSANVMLFIVLMEIISLASWLIVISDGSVASKKAGLQYFIADHVASVLIMA 173 Query: 181 AFLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPS 240 AFL++ ++ S +F++F ++ AS VFLLA GFG KA + H WL +A+P APS Sbjct: 174 AFLILSLQANSYNFSAFTHHPVTGTTASLVFLLALAGFGIKAAGIGFHGWLAKAYPIAPS 233 Query: 241 HASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDI 300 + S L+S VMVKIGI+GILKV + L T LWWG LV+ GA+S++LGV+YALAE DI Sbjct: 234 YCSTLISCVMVKIGIYGILKVGVLFLGAT--QLWWGFLVLIFGALSSVLGVMYALAEHDI 291 Query: 301 KRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAG 360 KRLLA+ T+EN+GIIL+ VGV+M+G++ H P L ++GLLGAL+HLLNHA+FKGLL LG+G Sbjct: 292 KRLLAYHTIENIGIILIGVGVSMIGIASHHPTLALLGLLGALYHLLNHAVFKGLLCLGSG 351 Query: 361 AIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRV 420 +I+ R+HT DM+KMG L K M TA LIG LAI A+PPLNGF+SEW+ +QSLFSL + Sbjct: 352 SIVYRMHTKDMDKMGGLGKTMSKTAITFLIGTLAICALPPLNGFVSEWFIYQSLFSLGKT 411 Query: 421 EAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLL 480 +V LAGP MVMLA+TG LA MCFVK+YGI F GAP++ A +EV MI A Sbjct: 412 GSVVNMLAGPFGMVMLALTGALACMCFVKVYGICFAGAPKTEQAATTREVGPAMITATSA 471 Query: 481 LAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQV--TPSLLLLLL 538 LA LC ++ + + W+AP IA + + P +VA+G+A+ P + TP + + L+ Sbjct: 472 LAVLCAVLGIGSPWIAPYFSAIASSILHIAPVSVANGMAVYPVAADQAILSTPVIAIALV 531 Query: 539 LAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLR 598 L + L+P R RR A R+ GD WACGY +E+ M S GV +P+R +F ++ R Sbjct: 532 L-LTLVPATLLYAFRQRRLARRQQGDPWACGYQYEHRMTVSAAGVTRPMRHMFGFIYNNR 590 Query: 599 QQ 600 Q Sbjct: 591 PQ 592 >UniRef50_Q0W2B5 Hydrogenase, membrane subunit 4-like protein (HycC-like) n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W2B5_UNCMA Length = 681 Score = 408 bits (1049), Expect = e-112, Method: Compositional matrix adjust. Identities = 250/625 (40%), Positives = 380/625 (60%), Gaps = 18/625 (2%) Query: 53 QLHAGVTLVARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAA 112 +L G+ ++ PF +++ +D LSAF +L IS++ S+YS+ Y REY GK + Sbjct: 63 ELSPGLRMILPMYTPF--GEMSFTVDPLSAFFILAISIVGFAVSVYSIGYSREYVGKYSI 120 Query: 113 AM-GFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVI-ARQDKTSINAGMLYFFI 170 + G N+F+ SM+ ++ NA F++++E+MS+ S+ LV+ + K +++AG LY + Sbjct: 121 GLLGSIFNLFLLSMILVVTAGNAIQFLIVWEVMSILSYLLVVYENRKKEAVSAGFLYIVM 180 Query: 171 AHAGSVLIMIAFLLMGRESGSLDFASFRTL--SLSPGLASAVFLLAFFGFGAKAGMMPLH 228 H G+ I + FLL+ +GS DFASF+ +L + S F+L GFG KAG+MPLH Sbjct: 181 THLGTAFITVGFLLLATTTGSFDFASFKGAGAALPELVKSLAFVLFLIGFGTKAGIMPLH 240 Query: 229 SWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISAL 288 WLP AHPAAPS+ SALMSGVMVK I+ +++ + L WWG+LV+ + ++SA+ Sbjct: 241 VWLPYAHPAAPSNVSALMSGVMVKTAIYMLIRCIFEFLGVADT--WWGLLVLLVASLSAV 298 Query: 289 LGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNH 348 LGVL+AL E D+KRLLA+STVENVGIIL+A+G +MV +S L + L+ ALFH NH Sbjct: 299 LGVLFALNETDLKRLLAYSTVENVGIILIAIGASMVFVSYGLKELAALALIAALFHAFNH 358 Query: 349 ALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEW 408 +LFK LLF+GAG+++ +HT ++E MG LAKRMPWT +G L+ISAIPPLNGF+SEW Sbjct: 359 SLFKALLFMGAGSVLYAVHTKNIELMGGLAKRMPWTGVFFFVGALSISAIPPLNGFVSEW 418 Query: 409 YTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQ 468 +QSL + +++ P+ + MLA+TG LA CFV+ YGI F APR+ HA EA+ Sbjct: 419 LIFQSLLLSFNFPEMIVKILIPVTIGMLALTGALAAACFVRAYGIAFLAAPRTEHAAEAK 478 Query: 469 EVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPAT-VASGIALVP-GTFH 526 +VP TM+ M +LA LCV+ L + ++ P I + T A+ + GI + P T Sbjct: 479 DVPVTMLAGMAILAVLCVVTGLMSVFIVPAIDSVTATIIGTSVASKMTYGIVMEPVVTSF 538 Query: 527 TQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRT---GDAWACGYGWENAMAPSGNGV 583 + ++P L + L + LLP +Y + +R RR GD W CG + +G Sbjct: 539 SGMSP--LAIGALMIVLLPAVYLI---TRYYGGRRKIVLGDTWDCGTRLSHRNEYTGTAY 593 Query: 584 MQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKE 643 + + ++FSA++R ++L + ++ A TEP +++ + P+ +LA+ Sbjct: 594 AKSINMIFSAIYRPSKELVARPTASPYISKELTYADHTEPLFEKYLYNPLAGFVVKLARR 653 Query: 644 IQHLQSGDFRLYCLYVVAALVVLLI 668 + +Q+G + Y Y+ LV+LLI Sbjct: 654 LSFIQTGSIQAYLTYIFITLVLLLI 678 >UniRef50_B1ZSE3 NADH dehydrogenase (Quinone) n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZSE3_OPITP Length = 683 Score = 385 bits (988), Expect = e-105, Method: Compositional matrix adjust. Identities = 245/618 (39%), Positives = 354/618 (57%), Gaps = 18/618 (2%) Query: 63 RFAPP-FEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIF 121 F PP F F LT+R+D+L AF ++V SL + S+YS+ + G+G + + Sbjct: 69 EFIPPLFPFLTLTVRVDALGAFFLVVSSLAGLAISIYSIGAAKGLAGRGNVGVLAALFNA 128 Query: 122 IASMVALLVMDNAFW-FIVLFEMMSLSSWFLV-IARQDKTSINAGMLYFFIAHAGSVLIM 179 + AL+ M W F+ +E+M+L+++ LV A + + AG+LYF ++H + ++ Sbjct: 129 LLLATALVFMAGDLWLFLGAWELMALTAYGLVSFAHEQPETRRAGVLYFIMSHLDAACVV 188 Query: 180 IAFLLMGRESGSLDFASFRTLS--LSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPA 237 + LL+ + SGS F S + ++PG A F+L GFG KAG++PLH WLP AHP Sbjct: 189 LGLLLLFQASGSTSFDSLHAIGGHMAPGKRDAAFVLFLLGFGIKAGIVPLHIWLPAAHPV 248 Query: 238 APSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAE 297 APS+ SA MSGV++K GI+G+++V+ D L P WWG+ V+ IG +SA+LGVLYAL E Sbjct: 249 APSNVSAFMSGVLIKSGIYGLIRVSFDFLGTP--PGWWGMTVLVIGTVSAVLGVLYALME 306 Query: 298 QDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFL 357 D+KRLLA+ ++EN+GIIL+ VG +++ L L + L+ L+H +NHA FKGLLFL Sbjct: 307 HDLKRLLAYHSIENIGIILMGVGTSLLFLHSGHTALATLALIAGLYHTINHATFKGLLFL 366 Query: 358 GAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSL 417 GAGA++ HTH+ME+MG LAKRMP TA LIG +AISA+PPLNGF+SEW T+QSL Sbjct: 367 GAGAVLHATHTHNMEEMGGLAKRMPQTAFCFLIGAVAISALPPLNGFVSEWLTYQSLLQG 426 Query: 418 SRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVA 477 +L P++ MLA+TG LA CFVK YG+TF PRS A AQE + Sbjct: 427 FDASQSLERLVLPLSGAMLALTGALAAACFVKAYGVTFLAQPRSEAAAHAQEAGPMLRFG 486 Query: 478 MLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPA---TVASGIALVPGTFHTQVTPSLL 534 M +L CVL+ L + + + + T + ++A+G+ L T T T S L Sbjct: 487 MAVLVVACVLLGLFPTTVIRLLDPVTQLLTGQQLSGQLSLANGLVLTSLTEKTG-TISTL 545 Query: 535 LLLLLAMPLLP---GLYWLWCRSRRAAFRRTGDAWACG-YGWENAMAPSGNGVMQPLRVV 590 L+LLA+ LLP L W+ R+ R R W CG G M + G +P+R++ Sbjct: 546 GLVLLAIGLLPIPFVLRWVLARNTRT---RRAPTWDCGLRGLTPQMEYTATGFSKPIRMI 602 Query: 591 FSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSG 650 F ALF R+ + + A E ++ RP+ R ++ I+ LQ+G Sbjct: 603 FKALFLPRRDVQREYDFSPHFATKLQFESHVEEVFESHFYRPVRLQILRASRRIRTLQAG 662 Query: 651 DFRLYCLYVVAALVVLLI 668 Y LY+ LV LL+ Sbjct: 663 SIHAYLLYMFVTLVALLL 680 >UniRef50_Q609T5 Hydrogenase subunit n=1 Tax=Methylococcus capsulatus RepID=Q609T5_METCA Length = 748 Score = 371 bits (953), Expect = e-101, Method: Compositional matrix adjust. Identities = 238/639 (37%), Positives = 372/639 (58%), Gaps = 24/639 (3%) Query: 43 GVIGIISGITQLHAGVTLVARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTY 102 GV + +G+ QLHA + + + +R+D+LSAF ++V+ L V+ +Y Y Sbjct: 116 GVSSLGAGLLQLHADAAVSGQLPFGLPWLHWHVRLDTLSAFFLVVLGLGVIAAGVYGPGY 175 Query: 103 MREYEGKGA-AAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTS- 160 R++ G+ + A+G F F+A M +L+ D+A+ F++ +E M++SS+FLV+ + + S Sbjct: 176 TRQFAGQYSFGALGLFTGSFVAGMEGVLIADDAYLFVIAWEAMTVSSYFLVVYQHEHASH 235 Query: 161 INAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGA 220 A LY + G++ I++AF ++ S S F ++R ++P +A FLLA GFG Sbjct: 236 RRAAFLYLLMGEVGAIAIILAFGILAAASHSFAFDAWRDAHVTPAWGTAAFLLALAGFGM 295 Query: 221 KAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVM 280 KAG++PLH+WLP AHPAAP+H S LMSGVM+KI ++G+L+ A DLL + +WG +V+ Sbjct: 296 KAGLVPLHAWLPEAHPAAPAHVSGLMSGVMLKIAVYGLLRFAFDLLGD--VQWYWGAIVL 353 Query: 281 AIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLG 340 +G SA LG+LYA+ + D+KRLLA+S++EN+GI+ + +G+ MV + L ++GL+ Sbjct: 354 GLGTGSAALGILYAVVQSDLKRLLAYSSIENMGIVFMGLGLCMVFIGKGHVQLGLIGLVA 413 Query: 341 ALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPP 400 AL+H+LNH+LFK LLFL AG+++ + H HD+E MG L KRMP TA L G +AI+ +PP Sbjct: 414 ALYHVLNHSLFKNLLFLAAGSVVHQTHRHDLEHMGGLIKRMPVTAGLFLAGSVAIAGLPP 473 Query: 401 LNGFISEWYTWQ-SLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAP 459 LNGF+SEW T+Q +L + S ++ L+ +A +LA T +A CFVK+YG+ F G P Sbjct: 474 LNGFVSEWLTFQAALQAASVIDNGILRSMVSVAAAILAFTAAVAAACFVKLYGVAFLGQP 533 Query: 460 RSTHAEEAQEVPNT-MIVAMLLLAALCVLIALSASWLAPKIMHIAHA-FTNTPPATVASG 517 R + A EV ++ M+ A +LA LC+L+ + +W+ + I T + A G Sbjct: 534 RERRSAHAHEVSHSGMLWAPAMLAGLCLLLGVLPTWVLDAMRPITRQLLGETLTSASARG 593 Query: 518 -IALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRR---AAFRRTGDAWACGYGW- 572 + L PG T + L+LL +A+ +WL R R AA R AW CG+G Sbjct: 594 WLWLTPGGVSTASYSAPLVLLAMALA-----WWLLRRLERRGPAADVRRAPAWDCGFGGL 648 Query: 573 ENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIR- 631 M + QP+R +F+ ++ + P L VTA + E +R R Sbjct: 649 SPRMQYTAAAFAQPVRRIFAPVWETVETSTPETAAANPL-QVTALSYRLEI--GDRSWRW 705 Query: 632 ---PIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLL 667 P+ + LA++ +Q+G R+Y Y L+VLL Sbjct: 706 LYLPLTRVVEDLARQTARIQTGQVRIYIAYSFMTLIVLL 744 >UniRef50_C8PJ79 ATP-binding protein n=1 Tax=Campylobacter gracilis RM3268 RepID=C8PJ79_9PROT Length = 657 Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust. Identities = 217/608 (35%), Positives = 346/608 (56%), Gaps = 23/608 (3%) Query: 64 FAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFF---MNI 120 +AP F + L F V+ + S+Y ++Y EY GK A +G F N Sbjct: 62 YAPKFA-------LSPLGNFFSFVVVFIGFASSVYGMSYAEEYIGK--ANIGVFACLFNT 112 Query: 121 FIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMI 180 FI SM+ ++ DN F F VL+E+M+L S FL+I K ++ A M+Y IA G+ I Sbjct: 113 FILSMLLVISADNVFCFAVLWELMTLISSFLIIVNDGKGTLKAVMVYLGIAQIGAFCITC 172 Query: 181 AFLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPS 240 L++ +GS +FA + +++ G + A F+L GFG+KAGM P H WLP+AHPAAPS Sbjct: 173 GLLIIANYAGSFEFAEWGKVNMPMGASVAAFILFLVGFGSKAGMWPFHVWLPQAHPAAPS 232 Query: 241 HASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDI 300 + SALMSGVM+K+ +F ++K + L L +++G+ V+ +GA S+L GVLYAL + D Sbjct: 233 NVSALMSGVMIKVALFTLVKFTLFL----PLSIYFGLAVLILGAASSLFGVLYALCQHDF 288 Query: 301 KRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAG 360 K LLA+ +VEN+GIILL +G + G++ + L VG L +H++NHA+FKGLLFL AG Sbjct: 289 KALLAYHSVENIGIILLGLGTGIYGVAAGNVTLAAVGFLAGCYHVVNHAIFKGLLFLCAG 348 Query: 361 AIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRV 420 ++I HT +M+ +G LAK+MP TA IG + I+A+PP+NGF+SEW+T+Q + ++ Sbjct: 349 SVIHATHTQNMDVLGGLAKKMPLTAVGMFIGIMGIAALPPVNGFVSEWFTYQGMLQGAKE 408 Query: 421 EAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHA-EEAQEVPNTMIVAML 479 + ++ A +A+V LA+TG L M +K+Y + F G PR E A+E P M++ M+ Sbjct: 409 SGIFIRYAFSLAVVALALTGVLVGM-HLKLYAVIFAGTPRDEKIWENAKESPLGMVLGMI 467 Query: 480 LLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLL 539 +L CV + A ++ IM ++ T+ + G + + + V+ L+ ++L Sbjct: 468 ILMIGCVGFGVGAHFIVDYIMQAVNSITSNREFVASLGASSITSPLGSIVSTPLIAVILC 527 Query: 540 AMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQ 599 + LLP + ++ R R T D WACG+ + M +G LR + LFR + Sbjct: 528 STMLLPFIILAVMKANRDKPRET-DPWACGFKYSPRMQMTGGPFTGDLRKIMDWLFRGHK 586 Query: 600 QLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYV 659 + + N + + +W + +P++ ++++A +I +QSG LY LY+ Sbjct: 587 R---RIEQNGYFGPIEYHNHPQDIWW-TMIYQPVIDWSKKVADKIGIIQSGYANLYTLYI 642 Query: 660 VAALVVLL 667 + L +L Sbjct: 643 LIYLCAVL 650 >UniRef50_Q1PZK0 Similar to membrane-bound [NiFe]-hydrogenase-3, subunit C n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PZK0_9BACT Length = 678 Score = 365 bits (938), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 241/684 (35%), Positives = 375/684 (54%), Gaps = 28/684 (4%) Query: 3 ALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVA 62 A L S+ILY +L +L + +S I + + I+ I+ L G+ + Sbjct: 2 AEHLFVISIILYAIGALFALCFFKWQAVGNYISLICAAIASCFSIVLSISVLTNGLIIHF 61 Query: 63 RFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGK-GAAAMGFFMNIF 121 F +D LS+F +LVIS++ V S+YS+ Y + Y K +GF N+ Sbjct: 62 DFLIYHAIIRYNFLLDPLSSFFMLVISVIGFVASIYSMGYTKLYVNKRDTRFLGFAYNLL 121 Query: 122 IASMVALLVMDNAFWFIVLFEMMSLSSWFLVI-ARQDKTSINAGMLYFFIAHAGSVLIMI 180 + SM+ ++ +NA F++++E+M+L S+FLVI ++ T+ AG +Y ++H G+ LI + Sbjct: 122 LVSMLLVVTANNALVFMIVWELMTLVSFFLVIFEHENPTNRKAGYVYLVMSHIGAGLIAV 181 Query: 181 AFLLM---GRESGSLDFASFRTLS--LSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAH 235 AF +M E+ + F FR + + P + VF L GFG KAG+ PLH WLP AH Sbjct: 182 AFFIMFAYAGEAFTFSFDDFRHIGAHMPPIYKNIVFFLIIIGFGIKAGIFPLHLWLPMAH 241 Query: 236 PAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYAL 295 PAAPS+ S +MSGVM+K I+G ++ + L T P WWG +V+ GA SA+LG+LYAL Sbjct: 242 PAAPSNVSMVMSGVMIKTAIYGFIRFYFEFL--TPCPPWWGFIVLVAGASSAILGILYAL 299 Query: 296 AEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLL 355 E+DIK LLA+S+VEN+GIIL+ +G++M+ S + L+ + ++ L+HL+NHA+FK LL Sbjct: 300 MERDIKTLLAYSSVENIGIILIGIGLSMIFKSYNLMTLSSLAMMAGLYHLINHAVFKCLL 359 Query: 356 FLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLF 415 F AG I HT ++E++G L KR+ TA L+G L+ISAIPPLNGF+SEW +QSL Sbjct: 360 FGCAGNIYYSTHTKNIEELGGLIKRLRVTAPLFLVGALSISAIPPLNGFMSEWLIFQSLL 419 Query: 416 SLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMI 475 + + +V ++ I ++A+TG L MCFVK +G++F PRS H +A+EVP M+ Sbjct: 420 NGFYIPSVFFKVMTVICGAIVALTGALVAMCFVKAFGVSFLALPRSEHTRKAKEVPLVML 479 Query: 476 VAMLLLAALCVLIALSASWLAPKIMHI-AHAFTNTPPATVASGIALVPGTFHTQVT---- 530 V+M +LA++CV + L + + I + H + S L + HT T Sbjct: 480 VSMGILASMCVFMGLFPATIMATINQVNTHLLGTNIINIITSYDWLQTKSIHTNFTDLSP 539 Query: 531 ---PSL-LLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQP 586 P L+LL++ L L R +R + W CG E + +P Sbjct: 540 KSAPIFGLILLVITFGFLTML-------RPGFTKRIYETWTCGITPEPRFGYTATAFTKP 592 Query: 587 LRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQH 646 +V+F L+R R ++ T + K A P +++ P+ S ++ +I+ Sbjct: 593 FKVIFGNLYRPRFEISTTYSVPKYFAKSITYLGEITPIFEKYFYNPVSSYVLNISNKIRW 652 Query: 647 LQSGDFRLYCLYVVAALVVLLIAI 670 + +G +Y Y+ V LLIAI Sbjct: 653 VHTGSIHVYLAYI---FVTLLIAI 673 >UniRef50_B2V8R6 NADH dehydrogenase (Quinone) n=1 Tax=Sulfurihydrogenibium sp. YO3AOP1 RepID=B2V8R6_SULSY Length = 662 Score = 358 bits (918), Expect = 5e-97, Method: Compositional matrix adjust. Identities = 198/551 (35%), Positives = 326/551 (59%), Gaps = 15/551 (2%) Query: 60 LVARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMN 119 + F F + ++D+LS F V ++SLL S+YS++Y++E+E + + F N Sbjct: 51 FIVSFQSVIPFLTFSYKVDNLSLFFVGLVSLLSFASSIYSVSYIKEFENQ--KVLTFLYN 108 Query: 120 IFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDK-TSINAGMLYFFIAHAGSVLI 178 +FI SM+ +++ N F++ +E+MS+ S+ LVI K ++NAG+ Y F+ H G+ I Sbjct: 109 LFIFSMIMVILSANVPTFLIWWEIMSVVSFLLVIFDYKKQENLNAGIFYIFMTHLGTTFI 168 Query: 179 MIAFLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAA 238 +I+F+L+ SGSL+F F ++L + VFL + GFG KAG+ LH WLP+AHP A Sbjct: 169 IISFILLYIYSGSLEFKDFVNVNLPEDVKFLVFLTSLIGFGTKAGIFLLHFWLPKAHPVA 228 Query: 239 PSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQ 298 PS+ SALMSGVM+K I+ +++ + L +P+ +G +V+ IGA+SA+ G+LYA + Sbjct: 229 PSNVSALMSGVMIKTAIYMLIRFYFEFLKD--MPVAFGYIVLFIGALSAIYGILYAYVQT 286 Query: 299 DIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLG 358 DIK++LA+S++EN+GIIL+AVG+AM+ S H +L + + L+H LNH +FKGLLFLG Sbjct: 287 DIKKMLAYSSMENIGIILIAVGLAMIFKSSHVWILMGISFIAVLYHTLNHTVFKGLLFLG 346 Query: 359 AGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLS 418 AG+++ + HT +ME++G L K MP T LIG L I+A+PP NGF+SEW +QSL S Sbjct: 347 AGSVLFKTHTKNMEELGGLNKIMPKTGILFLIGILGITALPPFNGFVSEWLIYQSLLFGS 406 Query: 419 RVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAM 478 ++ + P+ +LA+TG A+ F K+YG F G R+ ++A E M+ M Sbjct: 407 KLNYEFISFTMPLFASVLALTGAFALGSFAKLYGTVFLGIGRTDKVKKASESDGFMLTGM 466 Query: 479 LLLAALCV---LIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHT-QVTPSLL 534 LA + V LI + ++ +++ +F+ +G+ L+ + +++ S+L Sbjct: 467 GFLAFMVVILGLIPILPVYVIDEVLKQTASFSIYNYIIYKNGLLLISTDYDFGRISTSIL 526 Query: 535 LLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAP---SGNGVMQPLRVVF 591 + + + ++ + R R + WACG G N S +G QP+R + Sbjct: 527 AIAGIVIFVIT---YFLIRKIGNGNVREYETWACGLGESNLTVKAQYSASGFSQPIRRIL 583 Query: 592 SALFRLRQQLD 602 S ++++++ L Sbjct: 584 SFVYKIKESLS 594 >UniRef50_A7GWM7 ATP-binding protein n=4 Tax=Epsilonproteobacteria RepID=A7GWM7_CAMC5 Length = 655 Score = 356 bits (914), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 218/664 (32%), Positives = 366/664 (55%), Gaps = 29/664 (4%) Query: 12 ILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQL--HAGVTLVARF--APP 67 +L++ +++ S+ L G + A+K+ S + + + + + TL+ F AP Sbjct: 6 MLFVVSAVISILLYGAPKAAVKVGFGLSALSCFYAMCHFVANMGMNDSFTLIGDFLYAPK 65 Query: 68 FEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFF---MNIFIAS 124 F + L F V+ + S+Y ++Y EY K A +G F + FI S Sbjct: 66 FA-------LTPLGNFFSFVVVFIGFASSVYGMSYADEYVKK--ANVGVFACLFSTFILS 116 Query: 125 MVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLL 184 M+ ++ DN F F+VL+E+M+L S FL++ K ++ A M+Y IA G+ I L+ Sbjct: 117 MLLVISADNVFCFVVLWELMTLVSSFLILVNDGKNTLKAVMVYLGIAQIGAFCITCGLLI 176 Query: 185 MGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASA 244 + +GS +F++F + + G ++ F+L GFG+KAGM P H WLP+AHPAAPS+ SA Sbjct: 177 IAYYAGSSEFSAFMNVKMPMGASATTFILFLVGFGSKAGMWPFHVWLPQAHPAAPSNVSA 236 Query: 245 LMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLL 304 LMSGVM+K+ +F ++K + L L +++G+ ++ +GA S+L GVLYAL + D K LL Sbjct: 237 LMSGVMIKVALFTLVKFTLYL----PLSVYFGLAILILGAASSLFGVLYALCQHDFKALL 292 Query: 305 AWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIIS 364 A+ +VEN+GIILL +G + GL+ + L +G L +H++NHA+FKGLLFL AG++I Sbjct: 293 AYHSVENIGIILLGLGTGIYGLAAGNMTLAAIGFLAGCYHVVNHAIFKGLLFLCAGSVIH 352 Query: 365 RLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVA 424 HT +M+ +G LAK+MPWTA IG + I+A+PP+NGF+SEW T+Q + + +++ Sbjct: 353 ATHTQNMDILGGLAKKMPWTAVGMFIGIMGIAALPPVNGFVSEWLTYQGMLQGAMGDSIL 412 Query: 425 LQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHA-EEAQEVPNTMIVAMLLLAA 483 ++ A +++V LA+TG L M +K+Y + F G PR E A+E P M++ M++L Sbjct: 413 VRYAFTLSVVALALTGVLVGM-HLKLYAVIFAGTPRDKKIWENAKESPIGMVLGMVVLMI 471 Query: 484 LCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPL 543 CV + A+ + IM ++ T + G + + V+ L+ ++L + + Sbjct: 472 GCVGFGVGANVIVDYIMKAVNSIT-VSGYDASLGSTAITSPLGSVVSTPLIAIILCSTMI 530 Query: 544 LPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDP 603 LP + ++ R+ R T D WACG+ + M +G LR + LF+ +++ Sbjct: 531 LPFIILAVMKANRSKPRET-DPWACGFKYSPRMQMTGGPFTGDLRKIMEWLFKGNKKV-- 587 Query: 604 TLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAAL 663 + + + W + P++ + A +I +QSG +Y LY++ L Sbjct: 588 ---VTRNYFDAIEYHNHPKDIWWGMIYEPVIKWCMKFADKIGIVQSGYTNVYTLYILVYL 644 Query: 664 VVLL 667 +L Sbjct: 645 CAIL 648 >UniRef50_C8W236 Hydrogenase, membrane subunit n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W236_DESAS Length = 661 Score = 354 bits (908), Expect = 8e-96, Method: Compositional matrix adjust. Identities = 233/596 (39%), Positives = 344/596 (57%), Gaps = 21/596 (3%) Query: 77 MDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFW 136 MD LS F V ISL+V + S YS YM Y+ + A F N+F+ SM+ ++ + NA Sbjct: 80 MDGLSGFFVATISLVVALVSFYSWNYMSIYKTENIAWWSFCYNVFVLSMLLVVTVTNAIM 139 Query: 137 FIVLFEMMSLSSWFLVIARQDKTSI-NAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFA 195 F++ +E+M+L+S+FLV + AG Y + H G+V IM AF LM + +G DFA Sbjct: 140 FLIFWELMTLASYFLVTFEYRHQQVRKAGFSYIVMTHLGTVFIMTAFFLMFKGTGGWDFA 199 Query: 196 --SFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKI 253 S + L + S +F+ A GFG KAG++PLH WLP AHPAAPS+ SA+MSGVM+K Sbjct: 200 VLSANSHGLPDAVKSLIFVCALIGFGTKAGIVPLHIWLPLAHPAAPSNVSAVMSGVMLKT 259 Query: 254 GIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVG 313 I+G++++ +D+L P WWG +V+A+G +SA++GVLYAL E D+KRLLA+ +VEN+G Sbjct: 260 AIYGMIRLIIDILGPG--PAWWGGVVLAVGVVSAVMGVLYALMEHDMKRLLAFHSVENIG 317 Query: 314 IILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEK 373 IIL+ +G A++ + P+ V L LFH+LNHA+FK LLFLG G++ H+ D+E+ Sbjct: 318 IILMGLGTALIFYAWSMPVAAAVALAAGLFHVLNHAIFKSLLFLGTGSVYYTTHSKDIEE 377 Query: 374 MGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVAL-QLAGPIA 432 +G L K+MP TA L+G ++ISAIPP NGF SE+ +QSL +S + A +AG ++ Sbjct: 378 LGGLIKKMPQTALLFLVGAISISAIPPFNGFASEYQIYQSLLGMSYQKVSAFWSIAGVLS 437 Query: 433 MVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSA 492 V LA+TG LA CFVK +GI+F PR+ A A+EVP M ++M LA LC+L Sbjct: 438 GVALALTGALAAACFVKAFGISFLALPRTKKAAAAEEVPFLMRISMAPLAVLCLLFG--- 494 Query: 493 SWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWC 552 +AP ++ N P LVPGT ++ + L LL + + L+ Sbjct: 495 --VAPGLV-----LNNITPLIE----QLVPGTPLPEIATYNMNLTLLLVLVGVFLFVASK 543 Query: 553 RSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLA 612 + RRT + W CG M + QP+R + A+ + ++++ RL Sbjct: 544 LTGAKKVRRT-ETWGCGIELTAEMEYTAASFSQPVRRTYRAILQPKRKVKNNYRLLPYFD 602 Query: 613 HVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLI 668 + P ++ + P+ + +K QH+QSG LY Y+ LVVLL+ Sbjct: 603 FHIHFDEHVRPVIEDFLYNPLRKTIIKTSKIWQHIQSGSINLYLGYIFITLVVLLV 658 >UniRef50_Q0F380 NADH dehydrogenase subunit N n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F380_9PROT Length = 633 Score = 348 bits (893), Expect = 4e-94, Method: Compositional matrix adjust. Identities = 241/660 (36%), Positives = 368/660 (55%), Gaps = 48/660 (7%) Query: 32 IKLSGITSLVGGVIGIISGITQLHAGVTLVARFAPPFEFADLTLRMDSLSAFMVLVISLL 91 + +SG+++++GG+ G+++ T L + L + + R+D LSAF +LVI L Sbjct: 2 LAISGLSAMIGGIQGLLTEPTSLILPLGL--------PWLPMHFRVDGLSAFFLLVIGTL 53 Query: 92 VVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFL 151 ++ ++YS Y++ + GA A+ F+ +F+ M+ +++ D+AF F++ +EMMS+SS+FL Sbjct: 54 LLPVAIYSQGYLKGEKRLGALAV--FLPLFVLGMLGVVIADDAFTFMLFWEMMSVSSYFL 111 Query: 152 VIARQDK-TSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRTLSLSPGLASAV 210 V ++ + AG +Y +AH +LI+ F ++ SGS +F+ R L P A+A Sbjct: 112 VTFEHERLENRKAGFIYLLMAHLAGLLILGGFAVLYAASGSFEFSVMRAAHLFPFWATAA 171 Query: 211 FLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTG 270 FLL FGFG KAG++P+H WLP AHP APS+ SALMSG+M+K+ +FG L+V DL+ Sbjct: 172 FLLVAFGFGTKAGVVPMHGWLPDAHPVAPSNVSALMSGIMLKVAVFGFLRVVWDLIGPGD 231 Query: 271 LPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHD 330 WWG LV+ G+ SA+ GVL+AL + D+KRLLA+ ++EN+GIIL+ +G+ M+ Sbjct: 232 FQWWWGALVLTAGSASAVSGVLFALQQHDLKRLLAYHSIENIGIILIGLGLGMLLAHFGH 291 Query: 331 PLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLI 390 PLL +GL+ L+H +NHALFKGLLF+GAGA++ T DME MG L RMP TA L+ Sbjct: 292 PLLAALGLIAGLYHTINHALFKGLLFMGAGAVLHVTGTRDMETMGGLIHRMPATALFFLV 351 Query: 391 GCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKM 450 C++ISA+PP NGF+SEW T+Q+ ++ L P + MLA+ G LA CFVK+ Sbjct: 352 ACVSISALPPFNGFVSEWLTFQTALMAPQLGGALLTAIVPFSAAMLALAGALAAACFVKV 411 Query: 451 YGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAP-------KIMHI- 502 +G+ F G RS H A EV M + M + A LC+L+ L P ++H+ Sbjct: 412 FGVVFLGHARSEHVAGAHEVDGWMKLGMAIPALLCLLLGLLPVMFIPLMDAIPASLLHVS 471 Query: 503 --AHAFTN-----TPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSR 555 AH + + TP V T + P + L M + GL + W + Sbjct: 472 LGAHLYEHGWLWLTP----------VDATHASYSAP----VALAGMLGVGGLVYWWLHPK 517 Query: 556 RAAFRRTGDAWACGYGWENA-MAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHV 614 RR G W+CG +A M + QPLR +F+ + R + + +K L Sbjct: 518 GCRIRR-GALWSCGNPHIHARMQYNATAFSQPLRRIFAGVLRPEEHIHVERPAHKLL--- 573 Query: 615 TARAQSTEPFWD---ERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLIAIA 671 T R + T D + +P+ T LAK ++H Y + A ++ LL+A A Sbjct: 574 TRRVRYTVHVGDPAVRHLYQPLARLTLGLAKRVRHEHQRGIHAYLAWTFATILFLLVAFA 633 >UniRef50_B8I2P9 NADH/Ubiquinone/plastoquinone (Complex I) n=2 Tax=Clostridium RepID=B8I2P9_CLOCE Length = 688 Score = 347 bits (891), Expect = 7e-94, Method: Compositional matrix adjust. Identities = 230/624 (36%), Positives = 358/624 (57%), Gaps = 29/624 (4%) Query: 64 FAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREY-EGKGAAAMGFFMNIFI 122 F F + +DSLSAF +++IS++ V+ SL+S TYM Y K + G N+FI Sbjct: 69 FNTNIPFLSIEFNIDSLSAFFIMIISIVAVIVSLFSYTYMSHYFSKKNISVFGCLYNLFI 128 Query: 123 ASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSI-NAGMLYFFIAHAGSVLIMIA 181 SMV L+ N F+V +E+MSL S+FLVI +K + AG +Y + + G+V IM A Sbjct: 129 VSMVLLVASSNMLLFLVFWELMSLISFFLVIYEHEKDEVQKAGRIYIIMTYIGTVCIMAA 188 Query: 182 FLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSH 241 F+L+ +GS + +S S+ G A+ +FLL GFG KAG++P+H WLP AHP APS+ Sbjct: 189 FVLIAAYTGSFNLSSINPQSIPHGSANIIFLLLLVGFGTKAGIIPVHIWLPYAHPVAPSN 248 Query: 242 ASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQ-DI 300 SALMSGVM+K+ I+G+ + ++L +GL WWG+ V+ IG SAL+G+ Y++A +I Sbjct: 249 ISALMSGVMIKMAIYGLFRFIFNILPVSGL--WWGVAVLCIGIASALIGIAYSVASTTNI 306 Query: 301 KRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAG 360 KRLLA+S++EN+GIIL +G+ M+ + + L + L L H LNHA+FK LLF+GAG Sbjct: 307 KRLLAYSSIENMGIILAGIGMMMIARASENYPLLSLSLTATLLHTLNHAVFKSLLFMGAG 366 Query: 361 AIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFS---- 416 I HT +MEK+G L K+MP + IGCL+ISA+PP NGFISE+ ++++ S Sbjct: 367 TIQYSTHTKNMEKLGGLIKKMPAASVFIFIGCLSISAVPPFNGFISEFMIFRTIISSISY 426 Query: 417 LSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIV 476 + E L + +A LA+TG L CFVK +GI+F G PRS AE A+E M+ Sbjct: 427 FAPSENFLLVVILMVAAAALALTGALVAFCFVKFFGISFLGMPRSLKAESAKEPGKPMLA 486 Query: 477 AMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHT------QVT 530 A+ A LC+L+ + + I + N +A+ +L+ ++ ++ Sbjct: 487 ALASAAVLCLLLGILPKYAIRLIDGVGSQLINI--KMLATDWSLLSPQYYPVGNSSLSIS 544 Query: 531 PSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWEN-AMAPSGNGVMQPLRV 589 L +LL+ + L + + R R + R + W CG+ N M S G + LR+ Sbjct: 545 SGLTAILLVLLGGLLLVVVMALRKRTSVERY--NTWDCGFTKLNPKMQYSATGFSKSLRI 602 Query: 590 VFSALFRLRQQLDPTLRLNKGLA--HVT--ARAQSTEPFWDERVIRPIVSATQRLAKEIQ 645 +F F+ + L+ T +G+A H+ ST F+++ + PI+S + +++I+ Sbjct: 603 IFRGFFKPGRDLEIT----EGIAPYHIKEGKYTTSTVRFFEKYLYVPIISTIIKFSRKIR 658 Query: 646 H-LQSGDFRLYCLYVVAALVVLLI 668 +Q+G Y +Y A+V++L+ Sbjct: 659 FTVQTGSIHAYLMYFFVAMVLMLL 682 >UniRef50_A0RMA9 Hydrogenase 4 membrane subunit n=2 Tax=Campylobacter fetus RepID=A0RMA9_CAMFF Length = 650 Score = 345 bits (884), Expect = 5e-93, Method: Compositional matrix adjust. Identities = 198/591 (33%), Positives = 338/591 (57%), Gaps = 22/591 (3%) Query: 80 LSAFMVLVISLLVVVCSLYSLTYMREYEGKGA-AAMGFFMNIFIASMVALLVMDNAFWFI 138 LS F +I+ + + +Y++ Y++E++ +G A N FI SM+ ++ + F FI Sbjct: 72 LSGFFSFIITFIAIGICIYTIGYIKEFKDRGNLAVFAALFNFFILSMLLVVSSSDVFSFI 131 Query: 139 VLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFR 198 VL+E+M+L S L+ +K S M+Y IA G+ I+IA L + +GS F + Sbjct: 132 VLWEIMTLISALLLKFNDEKHSNKTVMIYLSIAQIGAFCILIALLFISYFAGSFSFIQWS 191 Query: 199 TLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGI 258 L + P +A+ + +L GFG+K GM P H W P +P APS+ + ++SG+M K+ IFGI Sbjct: 192 KLDIDPTVATCILILLLIGFGSKIGMFPFHVWAPLVYPLAPSNVAGMLSGIMSKMAIFGI 251 Query: 259 LKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLA 318 ++ ++ L +G L V+A+GAISAL+G+ YAL + D +L+++S+VEN+GII+L Sbjct: 252 IQFSVILPITSGFALS----VVALGAISALIGITYALIQNDYIKLISYSSVENLGIIMLG 307 Query: 319 VGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALA 378 VGV G+S+ +P L ++G +GALFH+LNH+ FK LLFLG+G+I S T +M +G LA Sbjct: 308 VGVGFYGISIAEPTLVLLGFIGALFHVLNHSTFKSLLFLGSGSIYSVTRTKNMNSLGGLA 367 Query: 379 KRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAV 438 ++MP+TA LIG ++ISA+PPLNGFISEW+ ++S+F + +++A +L +A++ LA+ Sbjct: 368 RKMPFTALFFLIGAISISALPPLNGFISEWFIYRSMFMGALDDSIASRLIFALAIICLAL 427 Query: 439 TGGLAVMCFVKMYGITFCGAPRSTHA-EEAQEVPNTMIVAMLLLAALCVLIALSASWLAP 497 TG + V F+K+YG+ F G P+ + A E M M +LA + A+ A+ + Sbjct: 428 TGAMVVYAFIKLYGVIFAGTPKDENIHNRACEKSFFMPFGMFILAFSSIYFAVFANNI-- 485 Query: 498 KIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRA 557 I+ + + P T+ S + P++++LL+ A+ L L+ L+ + Sbjct: 486 -ILFLGNVVLYLVPQTMYS------MNINVISMPAIMILLIFALALPFLLFGLFGANMSK 538 Query: 558 AFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTAR 617 R + WACG+ + M+ + N + + + S + + + + + ++V + Sbjct: 539 V--RASEPWACGFKFSPQMSMNSNSFVGDFKRLISKVIKFKTE----TKQQNYFSNVDYK 592 Query: 618 AQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLI 668 TE W + + PI+ +A +I Q+G Y +Y++ L +L+ Sbjct: 593 T-GTEDVWWKILYEPIIKFNMLIADKIGAFQNGRSSFYVVYILVYLYAMLV 642 >UniRef50_Q6APE8 Probable hydrogenase, component B-formate hydrogenlyase subunit 3 n=1 Tax=Desulfotalea psychrophila RepID=Q6APE8_DESPS Length = 652 Score = 344 bits (883), Expect = 6e-93, Method: Compositional matrix adjust. Identities = 231/639 (36%), Positives = 354/639 (55%), Gaps = 26/639 (4%) Query: 37 ITSLVGGVIGIISGITQLHAGVTLVARFAPP-FEFADLTLRMDSLSAFMVLVISLLVVVC 95 I + VG IGI + LH V V F+ P L+ +D+LSAF ++ I ++ + Sbjct: 35 IITAVGCAIGIYAITIPLHGAV--VPSFSRPWLHLFTLSFSLDALSAFFLIPIFVVCPLA 92 Query: 96 SLYSLTYMREYEGKGAAAMGFFM-NIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIA 154 +LYS YM + E KG + FF N+ + SM + DN F++++E+MSLSS+FLVI Sbjct: 93 ALYSYHYMDKIEEKGRIGVSFFFFNLLLISMALVTAADNIISFLLVWELMSLSSFFLVIH 152 Query: 155 R-QDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRTLSLSPGLASAVFLL 213 Q++ + AG +YF A AG++ I+ A L ++G DFA+F TL L VF L Sbjct: 153 DYQEEDTRRAGYIYFVFAQAGAMFIIAALALAYSQTGIHDFAAFATLPAHIKLI--VFFL 210 Query: 214 AFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPL 273 A GFG+KAG+ PLH WLP AHPAAP H SA+MSGVM+K+GI+GI+++ ++L + L Sbjct: 211 ALVGFGSKAGIFPLHMWLPHAHPAAPCHISAIMSGVMIKMGIYGIIRLYVELEDTS---L 267 Query: 274 WWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLL 333 G V+ +G IS +LGV+YAL +QDIK++LA+S+VEN+G+IL+ G+ M+G+S + ++ Sbjct: 268 IIGQTVLTLGMISGILGVVYALGKQDIKKVLAYSSVENIGVILIGAGIGMMGMSTGNMVM 327 Query: 334 TVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCL 393 G G L H+LNH+LFK LLFLGAGAI+ + T ++++G L KR+P T + L G + Sbjct: 328 ASFGFAGCLLHVLNHSLFKTLLFLGAGAIVQKTGTRRLDELGGLIKRLPLTGKSFLAGSV 387 Query: 394 AISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGI 453 +IS +PP NGFISE+ + F ++ A A ++++ LA+ GGLA CF +M GI Sbjct: 388 SISGLPPFNGFISEFLIYYGAFHGLSLKGSAFLFA-MLSILALAIIGGLAASCFTRMMGI 446 Query: 454 TFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPAT 513 F G PR+ A +A E TM + M+ LAA C+ I L + AP + + A + P T Sbjct: 447 IFLGEPRTAKAAKATEAGFTMTLPMIFLAASCLFIGL---FPAPFVGIVFSALASIPALT 503 Query: 514 VASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWE 573 G + + + L L +L+ LL L + R W C + Sbjct: 504 PIDGAEVTLLAENLGLAARLFLAVLIFSTLLRKLLY------RNKVVVQAPTWGCAFAQP 557 Query: 574 N-AMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRL-NKGLAHVTARAQSTEPFWDERVIR 631 + M +G + F +++ R+ + + T E ER++ Sbjct: 558 SVKMQYTGTSYAMSIIAFFRPFIQIKTNYSGIKRIFPRKTTYKTEVDDIAEVCLIERIVT 617 Query: 632 PIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLIAI 670 P++ + + IQH G +LY Y+ ++VLL+ + Sbjct: 618 PLLYFLGKF-RWIQH---GHIQLYIAYIAVTIIVLLLCV 652 >UniRef50_A5G8U2 NADH dehydrogenase (Quinone) n=13 Tax=Desulfuromonadales RepID=A5G8U2_GEOUR Length = 669 Score = 342 bits (876), Expect = 4e-92, Method: Compositional matrix adjust. Identities = 231/620 (37%), Positives = 340/620 (54%), Gaps = 52/620 (8%) Query: 70 FADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEG-KGAAAMGFFMNIFIASMVAL 128 F + +D LSA +L+I L+ + CS+Y+ Y + + + FF + A++V L Sbjct: 78 FGPCEIGLDHLSAVFLLIIFLISICCSIYATGYWPAASNQRTSRKLTFFFGLLTAALVLL 137 Query: 129 LVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSI-NAGMLYFFIAHAGSVLIMIAFLLMGR 187 ++ ++ F++ +E+M+LS++F++ K + AG++Y H G++ + F L+ Sbjct: 138 VIARDSILFLMAWEVMALSAYFVLTTEDHKPEVREAGIIYMVATHTGTLALFAMFSLLKG 197 Query: 188 ESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMS 247 + S F++ ++ +P LA+A+F A FGFG KAG+MPLH WLP AH APSH SA+MS Sbjct: 198 AAASHQFSAMTAINPAPPLAAAIFCTALFGFGLKAGLMPLHIWLPSAHATAPSHISAIMS 257 Query: 248 GVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWS 307 GVM+K GI+GI++V + Q P+WWGI ++ G +SA+LGV +AL + D+KRLLA+ Sbjct: 258 GVMIKTGIYGIIRV-LSFFPQP--PIWWGITLLVAGIVSAVLGVAFALGQHDLKRLLAYH 314 Query: 308 TVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLH 367 ++EN+GII + +GVA++G + PLLTV+G+ GAL H LNHALFK LLFLGAGA+I H Sbjct: 315 SIENIGIIFMGIGVAVIGQATGQPLLTVLGMAGALLHTLNHALFKSLLFLGAGAVIHATH 374 Query: 368 THDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLF----SLSRVEAV 423 T ++++MG LAK MPWTA L+G +AI +PPLNGF+SE+ + F ++S Sbjct: 375 TREIDRMGGLAKAMPWTAILFLLGAVAICGLPPLNGFVSEYLIYLGFFGGVNTVSGPAVP 434 Query: 424 ALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAA 483 A+ LA P LA+ G LAV CFVK++GI F GA RS E Q+ M M+LL A Sbjct: 435 AMALAAP----SLALVGALAVACFVKVFGIVFLGARRSREIEPLQDAGWPMRAPMILLGA 490 Query: 484 LCVLIA----LSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPS------L 533 LCV+I L A L P I A P V +G Q PS + Sbjct: 491 LCVIIGLFPQLVARLLQPTIYSWA-------PTLVITG----------QTIPSAAPLGWI 533 Query: 534 LLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGY-GWENAMAPSGNGVMQPLRVVFS 592 +L L + L L + + R + T W CGY M S + + + +F+ Sbjct: 534 TVLGLALLTLGGLLAFDFYRRIKQETVGTSGTWGCGYLKPSPRMQYSASSFAEMIVKLFA 593 Query: 593 ALFRLR-QQLD---PTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQ 648 R ++ D P + ++ +HV E I P A I+ LQ Sbjct: 594 GALRPHVEKPDITGPFPQRSRFASHVPEAVL-------ELGIVPFFKAVDERFATIRRLQ 646 Query: 649 SGDFRLYCLYVVAALVVLLI 668 G LY LYV L +LL+ Sbjct: 647 HGQLHLYILYVFITLCLLLV 666 >UniRef50_C0QBF3 HyfB n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QBF3_DESAH Length = 655 Score = 341 bits (875), Expect = 5e-92, Method: Compositional matrix adjust. Identities = 239/649 (36%), Positives = 354/649 (54%), Gaps = 36/649 (5%) Query: 24 LLGLDRLAIKLSGITSLVGGVIGIISGITQL-HAGVTLVARFAPPFEF--ADLTLRMDSL 80 LG + A + +L G V+ + + I + G LV P++F L LRMD L Sbjct: 20 FLGRSKRANTAGALFALAGSVMAMAASIDAITRDGFDLVL----PWKFLLGSLHLRMDPL 75 Query: 81 SAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMN-IFIASMVALLVMDNAFWFIV 139 S F LVI L+ ++Y YM Y GK + + + I ASM+ ++ N F++ Sbjct: 76 SGFFGLVICLVSGFSAIYGARYMDAYAGKKHLGIAWSLYLILTASMMLVITAWNGVLFLI 135 Query: 140 LFEMMSLSSWFLVIAR-QDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFR 198 +E+MS+SS+ LVI Q + AG +Y H G+ L+++ F++MG+ + F Sbjct: 136 AWEIMSVSSFLLVIFEFQRPGVLKAGWIYLVATHLGTALLLVMFMVMGKNNAY----DFN 191 Query: 199 TLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGI 258 + S AS VF+LA GFG KAG++P H WLP AHPAAPSH SA+MS M+K GI+GI Sbjct: 192 LVQASSTGASLVFILAVIGFGTKAGLLPFHVWLPEAHPAAPSHVSAVMSAAMIKTGIYGI 251 Query: 259 LKVAMDLLAQTGLP-LWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILL 317 +++ M + G P WG ++ IGA++ + GV+ ALA+QDIKRLLA+S+VEN+GII + Sbjct: 252 IRICMLI----GPPKASWGWTLIIIGAMTGIFGVMSALAQQDIKRLLAYSSVENMGIICI 307 Query: 318 AVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGAL 377 +G+ + LS P + +G+ G + H+LNHALFK LLF GAG+++ HT DMEKMG L Sbjct: 308 GLGLGFLALSTGHPFIGALGISGGMLHVLNHALFKSLLFFGAGSVLHSTHTRDMEKMGGL 367 Query: 378 AKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLF-SLSRVEAVALQLAGPIAMVML 436 K MP T +I A+ A+PPLNGFISE+ + F SL + LAG + +V L Sbjct: 368 MKSMPVTGTTFVIASAAVCALPPLNGFISEFLIYFGAFSSLYASKGTFSVLAGILVIVSL 427 Query: 437 AVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSA---- 492 A+ GGLA+ CF K GI F G PRS+ A +A E P M + M++LA LC+L+ + + Sbjct: 428 ALIGGLALACFSKAAGIVFSGHPRSSEARDAHESPLAMGIPMIVLAGLCLLVGIFSPLVI 487 Query: 493 SWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWC 552 + P + ++ +T A + S A +P T ++ +L +LL GL Sbjct: 488 DFFQPVFETVINSLGSTGFARLKS--AAIPLTMISRAGLIILATILLLA----GLRRYLL 541 Query: 553 RSRRAAFRRTGDAWACGYGWENA-MAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGL 611 ++R T W CGY A M + + P+ +F A+ R+ L L Sbjct: 542 KNRTI---HTTGTWDCGYTAPTARMQYTASSFADPITGMFGAILGSRKDLKADTSLFP-- 596 Query: 612 AHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVV 660 ++ + +ST+ F + RP+ A +A LQ G +LY LY+V Sbjct: 597 IFLSIKTRSTDLFM-YLLYRPVFHAIAWVALRFHFLQRGYNQLYILYIV 644 >UniRef50_B8FUM3 NADH dehydrogenase (Quinone) n=3 Tax=Desulfitobacterium RepID=B8FUM3_DESHD Length = 637 Score = 336 bits (861), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 221/598 (36%), Positives = 333/598 (55%), Gaps = 18/598 (3%) Query: 78 DSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMN--IFIASMVALLVMDNAF 135 D L+AF +LV+ L + SLY L YM++YEGK + + F ++ F+ SM +L+++N F Sbjct: 48 DGLTAFFLLVLLLGQGIASLYGLGYMKDYEGK-RSLLSFSLSWAAFLGSMAGVLIVNNGF 106 Query: 136 WFIVLFEMMSLSSWFLVIARQDKTSIN-AGMLYFFIAHAGSVLIMIAFLLMGRESGSLDF 194 +F+ L+E+MSL S+ LVI +++S A +YF + H G+V ++ A L + ++GS + Sbjct: 107 YFLFLWELMSLFSFLLVIYEHEESSNRRAAFIYFVMTHVGTVFLIAAVLYLYSKTGSFLY 166 Query: 195 ASFR--TLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVK 252 + T +LSPG + +FL GFG KAG++P H WLP AHP APS SALMSGVMVK Sbjct: 167 GDWAAITPTLSPGEKNGLFLCFLIGFGTKAGLVPFHIWLPYAHPVAPSPVSALMSGVMVK 226 Query: 253 IGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENV 312 I ++ +++ LA + LWWG L++A+G +SA +G+LYA EQD+KRLLA+STVEN+ Sbjct: 227 IALYMMMRWVWLTLAP--MELWWGGLMLALGVLSAFIGILYACVEQDVKRLLAYSTVENM 284 Query: 313 GIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDME 372 GI+ +A+G AM+ +L L V+ L +H ++H LFK LF+ AG II HT ++ Sbjct: 285 GILTMALGTAMIARTLGYSDLVVLALAAFFWHGIHHLLFKSGLFMAAGNIIQATHTKRLD 344 Query: 373 KMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLS-RVEAVALQLAGPI 431 +MG L K+MP T ++G + +SA+PPL GF EW + +L+ S +VE +LA P+ Sbjct: 345 QMGGLLKKMPRTGLWAMVGAVGLSALPPLGGFWGEWLLFHALWKTSVQVEGGLFKLALPL 404 Query: 432 AMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALS 491 ++ LA LA+ VK + F G RS +A AQE+P V+M + L +L L Sbjct: 405 SLAALAFISALALATMVKWFAGAFLGQARSANAANAQELPWPQTVSMAMAMMLTLLATLY 464 Query: 492 ASWLAPKIMHIAHAFTNTPPATVASGIAL-VPGTFHTQVTPSLLLLLLLAMPLLPGLYWL 550 L I H +T + + +AL + F +TP +LLL L ++ LY L Sbjct: 465 PQGLWKLISVPIHVLKDTSDSPLTDSLALPLWADFFNLITPYILLLGLFSVT----LYQL 520 Query: 551 WCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKG 610 R R +R W CG M +G G+ PLR+ + R +D Sbjct: 521 SARKR----KRVAGTWNCGVPLTPRMQYTGLGITMPLRIALKKVLAFRPIIDKKFGETPY 576 Query: 611 LAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLI 668 + T +E RP + R A+ ++ LQ+G Y Y++ LVV+LI Sbjct: 577 VLQSLHYRGRTREMTEEVFYRPAMKLLLRCAERVRILQTGSIHTYLAYILITLVVVLI 634 >UniRef50_B6AS28 NADH dehydrogenase (Quinone) n=3 Tax=Leptospirillum RepID=B6AS28_9BACT Length = 686 Score = 331 bits (848), Expect = 6e-89, Method: Compositional matrix adjust. Identities = 222/608 (36%), Positives = 348/608 (57%), Gaps = 22/608 (3%) Query: 67 PFEFADLTLRM--DSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIAS 124 PF + + R+ D LS F + V+ + + L+++ + R+ + + F++ +F+ + Sbjct: 73 PFGWPGIPFRLALDPLSGFFLAVLGFVSIPVLLFAIGFFRDDSVRKTRWVLFWLPLFLGT 132 Query: 125 MVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSI-NAGMLYFFIAHAGSVLIMIAFL 183 M +L+ D+ F+V +E M+LSS+FLV+ + + AG LY +A G+ LI+++F Sbjct: 133 MSGVLLADDVLTFLVFWEGMALSSFFLVVTDISEEGVRKAGFLYLLMAQIGTGLILLSFF 192 Query: 184 LMGRESG------SLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPA 237 L+ S SL FA L +SPG+A VF L+F GFGAKAG++PLH WLP AHP Sbjct: 193 LLADGSSPDGGLSSLAFADLSRLPVSPGIAGWVFFLSFAGFGAKAGIVPLHVWLPEAHPV 252 Query: 238 APSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAE 297 APS SALMSG+M+KI ++G+++V + LL + L + G+ V+AIG++SAL GVL+AL + Sbjct: 253 APSPVSALMSGLMLKIALYGMIRVDLGLLGVSHLQPFMGVAVLAIGSLSALFGVLHALVQ 312 Query: 298 QDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFL 357 D KRLLA+ ++EN+GIIL+ G+ ++ + P+ V +LFH+LNHALFK LLFL Sbjct: 313 HDPKRLLAYHSIENIGIILIGFGLFLIFRTTGHPVPAAVAFSASLFHVLNHALFKSLLFL 372 Query: 358 GAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSL 417 GAG I+ + THD+ +G L + MP T+ L+G LAIS +PPLNGF+SEW T+Q+ Sbjct: 373 GAGTILKKTGTHDLNDLGGLFRTMPATSFLFLVGALAISGLPPLNGFLSEWLTFQAALFA 432 Query: 418 SRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVA 477 + Q A ++ +LA++ L MCFVK+ G++F G RS A +E + A Sbjct: 433 PSLSTFLFQSAVVLSAALLALSSALTAMCFVKVTGVSFFGQARSVRASLVREDRGFELSA 492 Query: 478 MLLLAALCVLIALSASWLAPKIMHIAHAFTNTP---PATVASGIALVP-GTFHTQVTPSL 533 M +LA C+ + L S + + ++ + T P A + LVP + Q +P L Sbjct: 493 MAILALGCLGLGLFPSPVLSGLSSVSLSLTGQPLPFDAEKDPWLWLVPVSSSRAQYSPLL 552 Query: 534 LLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENA-MAPSGNGVMQPLRVVFS 592 LL LA+ + L + RS+R RT W CGY + M + + QP+R F+ Sbjct: 553 LLASFLAVLAILHLRAVLGRSQRPV--RTAPTWNCGYPVRTSRMQETADAFGQPVRHFFA 610 Query: 593 ALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDF 652 FR+ + L P+ ++ H+ R +PFW + + P+VSA ++ + +++ Sbjct: 611 PFFRMERHL-PSPGDDRPSYHLEVR----DPFW-KGLYDPLVSALLCVSDAAETIRNRRI 664 Query: 653 RLYCLYVV 660 Y LY V Sbjct: 665 SHYLLYSV 672 >UniRef50_P16429 Formate hydrogenlyase subunit 3 n=77 Tax=Bacteria RepID=HYCC_ECOLI Length = 608 Score = 330 bits (846), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 213/575 (37%), Positives = 329/575 (57%), Gaps = 35/575 (6%) Query: 34 LSGITSLVGGVIGII----SGITQLHAGVTLVARFAPPFEFADLTLRMDSLSAFMVLVIS 89 LSG + +GG +G + +G T L V + + +++ L+A ++ + Sbjct: 30 LSGWIAGIGGAVGSLYTAAAGFTVLTGAVGV----SGALSLVSYDVQISPLNAIWLITLG 85 Query: 90 LLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSW 149 L + SLY++ + R + K G +N+ +A+ V ++ N F+V+ E+M+L + Sbjct: 86 LCGLFVSLYNIDWHRHAQVK---CNGLQINMLMAAAVCAVIASNLGMFVVMAEIMALCAV 142 Query: 150 FLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRTLSLSPGLASA 209 FL ++ G L+F + G++L+ IA L+ + G+LD L S Sbjct: 143 FLTSNSKE------GKLWFALGRLGTLLLAIACWLLWQRYGTLDLRLLDMRMQQLPLGSD 196 Query: 210 VFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQT 269 ++LL GFG AG++PLH W+P+AH A + A+AL S V++KIG+ L + L Sbjct: 197 IWLLGVIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTVVMKIGL---LGILTLSLLGG 253 Query: 270 GLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLH 329 PLWWGI ++ +G I+A +G LYAL E +I+RLLA+ T+EN+GIILL +G + G++L Sbjct: 254 NAPLWWGIALLVLGMITAFVGGLYALVEHNIQRLLAYHTLENIGIILLGLGAGVTGIALE 313 Query: 330 DPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACL 389 P L +GL+G L+HLLNH+LFK +LFLGAG++ R D+EK+G + K+MP + A L Sbjct: 314 QPALIALGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAML 373 Query: 390 IGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVK 449 +G +A++A+PPLNGF EW +QS F LS A +L GP+ V LA+TG LAVMC K Sbjct: 374 VGLMAMAALPPLNGFAGEWVIYQSFFKLSNSGAFVARLLGPLLAVGLAITGALAVMCMAK 433 Query: 450 MYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNT 509 +YG+TF GAPR+ AE A P M V+++ LA CV+ ++A WL P + Sbjct: 434 VYGVTFLGAPRTKEAENATCAPLLMSVSVVALAICCVIGGVAAPWLLPML---------- 483 Query: 510 PPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACG 569 + A + L P +T V+ ++ LLL+A PLLP + C+ R R G AW CG Sbjct: 484 ---SAAVPLPLEPA--NTTVSQPMITLLLIACPLLPFIIMAICKGDRLPSRSRGAAWVCG 538 Query: 570 YGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPT 604 Y E +M + +G P++ F+ + +LR+ L+P Sbjct: 539 YDHEKSMVITAHGFAMPVKQAFAPVLKLRKWLNPV 573 >UniRef50_B5QVA0 Formate hydrogenlyase subunit 3 n=43 Tax=Enterobacteriaceae RepID=B5QVA0_SALEP Length = 608 Score = 328 bits (842), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 218/574 (37%), Positives = 332/574 (57%), Gaps = 35/574 (6%) Query: 34 LSGITSLVGGVIGII----SGITQLHAGVTLVARFAPPFEFADLTLRMDSLSAFMVLVIS 89 LSG + +GG +G + +G T L + VT V+ P F L++ L+A ++ + Sbjct: 30 LSGWIAGIGGAVGSLCTAGAGFTALTSAVT-VSGVMP---FTGHMLQITPLNAIWLITLG 85 Query: 90 LLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSW 149 L + SL+++ + R + K A G +N+ +A+ V +V N +V+ E+M+L + Sbjct: 86 LCGLFVSLFNIDWHRHPQVK---ANGLLINLLMAAAVCAVVASNLGTMVVMAEIMALCAV 142 Query: 150 FLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRTLSLSPGLASA 209 FL ++ G L+F + G++L+ IA L+ + G+LD + L S Sbjct: 143 FLTGGSKE------GKLWFALGRLGTLLLAIACWLVWQRYGTLDLGLLDQRAQQLPLGSD 196 Query: 210 VFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQT 269 ++LL GFG AG++PLH W+P+AH A + A+AL S V++KIG+ L + L Sbjct: 197 IWLLGVIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTVVMKIGL---LGILTLSLLGG 253 Query: 270 GLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLH 329 PLWWG+ ++ +G I+A +G LYAL E +I+RLLA+ T+EN+GIILL +G + G++L+ Sbjct: 254 NAPLWWGVALLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIILLGLGAGVTGIALN 313 Query: 330 DPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACL 389 P+L +GL G L+HLLNH+LFK +LFLGAG+I R D+EK+G + KRMP + A L Sbjct: 314 QPVLIALGLTGGLYHLLNHSLFKSVLFLGAGSIWFRTGHRDIEKLGGIGKRMPVISIAML 373 Query: 390 IGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVK 449 +G +A++A+PPLNGF EW +QS F L A +L GP+ V LA+TG LAVMC K Sbjct: 374 VGLMAMAALPPLNGFAGEWVIYQSFFKLGNSGAFVGRLLGPLLAVGLAITGALAVMCMAK 433 Query: 450 MYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNT 509 +YG+TF GAPR+ AE A P M V+++ LA CV+ ++A WL P I Sbjct: 434 VYGVTFLGAPRTKEAENASCAPILMGVSVVALAICCVIGGVAAPWLLPMI---------- 483 Query: 510 PPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACG 569 ++ + L T HT V+ ++ LLL+A PLLP + + R R G AW CG Sbjct: 484 -----STAVPLPLETAHTTVSQPMITLLLVACPLLPFIIMAMFKGNRLPSRSRGAAWVCG 538 Query: 570 YGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDP 603 Y E +M + G P++ F+ + +LR+ L+P Sbjct: 539 YDHEQSMVITAYGFAMPVKEAFAPVLKLRKWLNP 572 >UniRef50_A1RWL8 NADH dehydrogenase (Quinone) n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RWL8_THEPD Length = 737 Score = 320 bits (820), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 179/428 (41%), Positives = 282/428 (65%), Gaps = 8/428 (1%) Query: 75 LRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGA-AAMGFFMNIFIASMVALLVMDN 133 L +D LSAF++LVIS + + S++S+ Y Y G+ + + + FF +F+ SMV ++ ++ Sbjct: 85 LYVDKLSAFLLLVISFVALYSSIFSIGYSEMYAGEYSISYLTFFYALFVLSMVLVVTAND 144 Query: 134 AFWFIVLFEMMSLSSWFLV-IARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSL 192 A F + +E+M+LSS+ LV + + S +A YF IAHAG I++++ L+ GSL Sbjct: 145 ALSFYLSWELMTLSSYMLVGYEHRSEESRDAAKTYFIIAHAGGACILLSYALLYFIKGSL 204 Query: 193 DFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVK 252 F +FR + PG+AS +FLLA GFG+KAG++PLH+WLP+AHPAAPS+ SAL+SGVM+K Sbjct: 205 SFDAFREGGVPPGIASLIFLLALVGFGSKAGIVPLHAWLPQAHPAAPSNVSALLSGVMLK 264 Query: 253 IGIFGILKVAMDLLAQTGLP-LWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVEN 311 + ++G+++V D L +G+ WG VM I A S ++GV +A+ + D+KRLLA+ ++EN Sbjct: 265 VAVYGLIRVVFDFLKPSGVEGGLWGCAVMIIAAFSTIIGVQFAVVQHDLKRLLAYHSIEN 324 Query: 312 VGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDM 371 +GIILL VG +++ S + + L AL+HLLNHA+FK LLFLG+G+++ T + Sbjct: 325 IGIILLGVGASLILYSEGLKDVAALALTAALYHLLNHAVFKSLLFLGSGSVLKSCRTRNF 384 Query: 372 EKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVA---LQLA 428 E +G L+K +PWT+ LI +AI+ +PPLNGF SEW T+QSL ++ + A + LA Sbjct: 385 ELLGGLSKYLPWTSVTFLIAAMAIAGVPPLNGFASEWLTYQSLLAVVKEAAGKAPWVSLA 444 Query: 429 GPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLI 488 + +ML + G LAV+CF K+YG+TF G + + + TM + M + AA C+++ Sbjct: 445 ALFSALMLGLAGALAVLCFTKVYGVTFLGPLGRVKPKGGESL--TMKIGMAIPAAACIVL 502 Query: 489 ALSASWLA 496 ++ ++A Sbjct: 503 GVAMPYVA 510 >UniRef50_Q12F20 NADH dehydrogenase (Quinone) n=37 Tax=Betaproteobacteria RepID=Q12F20_POLSJ Length = 674 Score = 319 bits (817), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 210/611 (34%), Positives = 322/611 (52%), Gaps = 18/611 (2%) Query: 67 PFEFADLT--LRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIAS 124 P DL LR+DSLSA+ ++VI S ++ Y R+ EG + ++F+AS Sbjct: 73 PIGLPDLPFHLRLDSLSAYFLMVIGAASAGISAFAAGYFRKGEGTSPGLLCLEYHVFLAS 132 Query: 125 MVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSI-NAGMLYFFIAHAGSVLIMIAFL 183 MV +++ D+A+ F+V++E M+LSS+FLV A + +AG LY +A G++ I++ F Sbjct: 133 MVGVVLADDAYSFMVMWETMALSSFFLVTANHRIPEVRSAGYLYITMARIGAIAILLCFG 192 Query: 184 LMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHAS 243 ++ +G FA+ R + +P AS FLLA FGFGAKAG++PLH WLP AHPAAPS S Sbjct: 193 VLQANTGDYTFANMRAQAPTPFWASLGFLLAVFGFGAKAGILPLHVWLPEAHPAAPSPVS 252 Query: 244 ALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRL 303 ALMSGVM+ I+G+++V+ DLL WWG L++A+G +AL GV++A + D+KRL Sbjct: 253 ALMSGVMLNTAIYGLMRVSFDLLHMRMW--WWGGLLLAVGLATALFGVVFAAVQTDMKRL 310 Query: 304 LAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAII 363 LA+S++EN+G++ + +G+ ++ + + + + L+H+ +HA FK LLFLG G+++ Sbjct: 311 LAYSSIENMGLLFVGIGLTLIFSAYDMNPMAALAMTATLYHVASHACFKSLLFLGTGSVL 370 Query: 364 SRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAV 423 ++ K+G L + MPW LIG LA + +PPL GF+SEW QS + Sbjct: 371 HATSERNLGKLGGLIRTMPWVGWLTLIGVLASAGLPPLGGFVSEWLLLQSFLFTPSLPLP 430 Query: 424 ALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAA 483 L + P+ ++A+ LA VK +G+ F G PR A + I M+ LA Sbjct: 431 LLTMLIPVVAALIALVAALAGYTMVKFFGVIFLGQPREGKLAGAHDAGRWEITGMVWLAL 490 Query: 484 LCVLIALSASWLAPKIMHIAHAF--TNTPPATVASGIALVPGTF-HTQVTPSLLLLLLLA 540 CV + L + I + + A G L P + P + LL +L Sbjct: 491 GCVALGLLPTQFIQLIDPVTQQLVASGLGAKVAAGGWLLAPNSLEQASYGPVIFLLGILG 550 Query: 541 MPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENA-MAPSGNGVMQPLRVVFSALFRLRQ 599 L L W R R G WACG+ W NA M + G QP+R +F F +++ Sbjct: 551 SFALAYLLVRWLYHGRV---RRGLPWACGFPWGNARMQDTAEGFGQPIRQIFEPFFLMQR 607 Query: 600 QLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYV 659 +L R + + FW + PI LA+ I +Q G +Y LY Sbjct: 608 ELPSPFD-----EQPRYRVRVEDHFWRWLYV-PIADLAAYLARLIGLMQQGRIAVYLLYS 661 Query: 660 VAALVVLLIAI 670 L+ L+A+ Sbjct: 662 FLTLIATLLAV 672 >UniRef50_A5FPH4 NADH dehydrogenase (Quinone) n=5 Tax=Dehalococcoides RepID=A5FPH4_DEHSB Length = 644 Score = 318 bits (815), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 210/610 (34%), Positives = 345/610 (56%), Gaps = 50/610 (8%) Query: 72 DLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYE-GKGAAAMGFFMNIFIASMVALLV 130 D+ +D L++F V++ISL+ + ++YSL Y + A + FM +FI SM+ ++ Sbjct: 70 DIAFHLDRLASFFVIIISLISLCVAVYSLGYNNHISSNERANLLSAFMAVFILSMIGVVA 129 Query: 131 MDNAFWFIVLFEMMSLSSWFLVIAR-QDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRES 189 N F I +E+M+LSS+FL++ Q+ + AG+ YF + ++ +M+ ++M ++ Sbjct: 130 SANTFSLIFFWEIMALSSFFLMMNDYQEPFTQRAGVYYFVLTQLSTIFLMLMAVVMYIQN 189 Query: 190 GSLDFASFRTLSLSPG---LASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALM 246 GS LSLS + S VF+LAF FG KAG++PLH WLP AH A+PS+ SALM Sbjct: 190 GSF------ALSLSGASSVIQSLVFVLAFLAFGIKAGIIPLHKWLPYAHSASPSNVSALM 243 Query: 247 SGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAW 306 SGVM+K+ I+G+++ MD+L+ +WWG+ ++ +G ISALLG++YA E D+K LLA+ Sbjct: 244 SGVMLKVAIYGLVRFLMDVLSP---EMWWGVGILLLGMISALLGIIYAFKEHDLKMLLAF 300 Query: 307 STVENVGIILLAVGVAMV-GLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISR 365 ++EN+GIIL+ +G+ ++ GL D L ++ L ALFH LNHA+FK LLF+ AG+++ Sbjct: 301 CSIENIGIILMGIGLYVIFGLYGLDTL-AMLALGSALFHSLNHAIFKSLLFMTAGSVVIA 359 Query: 366 LHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVAL 425 + ++EKMG L K MP+T+ L+G ++ISA+PP NGF+SE ++S F + ++ Sbjct: 360 VGDRNIEKMGGLIKLMPYTSVIFLVGAVSISALPPFNGFMSELMLFESFFQSFSLAESSI 419 Query: 426 QLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALC 485 ++ + +LA+T LA CFVK +G F PRS A A+EV +MI+ +LA C Sbjct: 420 KILLFSVLAILALTSALAAACFVKAFGTVFLAMPRSQEAASAKEVSKSMIIGPAILAVAC 479 Query: 486 VLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLP 545 +++ L A +I +A + P ++ + ++ G L+ Sbjct: 480 LVLGL----FAVQIFSVAGYSFDLPDMSLVGLVLVIFGV------------------LVF 517 Query: 546 GLYWLWC--RSRRAAFRRTGDAWACGYGWEN-AMAPSGNGVMQPLRVVFSALFRLRQQLD 602 G+ L+ +SRR+ + WACGY + +G +PL +F ++R R + Sbjct: 518 GMVRLFSPRKSRRS------ETWACGYVRPTPRFEYTASGFAEPLFQIFRLIYRTRHYNE 571 Query: 603 PTLRLNKGLAHVTAR-AQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVA 661 + N+ + A T F+DE + P+ R+++ I LQ D + LY + Sbjct: 572 RSYEDNQQAIFKQGKSAIHTIKFFDEYIYLPVAGLFGRISRFISRLQDVDLGSHILY--S 629 Query: 662 ALVVLLIAIA 671 + VLL+ +A Sbjct: 630 FITVLLVILA 639 >UniRef50_D1RUK6 NADH dehydrogenase (Quinone) n=1 Tax=Serratia odorifera 4Rx13 RepID=D1RUK6_SEROD Length = 624 Score = 317 bits (812), Expect = 8e-85, Method: Compositional matrix adjust. Identities = 230/529 (43%), Positives = 327/529 (61%), Gaps = 13/529 (2%) Query: 75 LRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNA 134 + + L+A ++LVI+L + LY ++ G M + A++ A ++ DNA Sbjct: 76 VEISGLNALLLLVIALSNLFVGLYLCHWLTTLNDHNRTRQGSLMLLMPAALSAAVMADNA 135 Query: 135 FWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDF 194 ++L E+ +L +FL++ RQD S AG F + G++L++ AF L+ ++ SL F Sbjct: 136 LALVLLLELAALCGYFLIVRRQDAKSQQAGHSQFLLMRFGTLLLVAAFALIYSQTHSLQF 195 Query: 195 ASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIG 254 ++ R ++L L S FLLA GFG AG+MPLH W+P+AH +AP+ A++L S ++K+G Sbjct: 196 STMREIALPSALRSGAFLLALAGFGIYAGVMPLHGWVPQAHSSAPAPAASLFSCALMKVG 255 Query: 255 IFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGI 314 + G++K+ MDLL PLWWG+LV+ + A +A G LYAL E D++RLLA+ T+EN+GI Sbjct: 256 LLGVIKIGMDLLGTP--PLWWGLLVLLLAAGTAFFGGLYALMEHDLRRLLAYHTLENIGI 313 Query: 315 ILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKM 374 ILL +G AMVGL+L P LT + L+G LFHL NH+LFK L L +GA+ + DMEKM Sbjct: 314 ILLGIGGAMVGLALQLPELTALALMGGLFHLCNHSLFKSALLLASGAVEQQTGLKDMEKM 373 Query: 375 GALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMV 434 G LA+ MPWT A L+G ++++A+PPLNGF SEW +Q LF S A +L GP+ V Sbjct: 374 GGLARLMPWTCIALLVGLVSMAALPPLNGFASEWLIYQGLFQFSAASAFVGRLLGPLLAV 433 Query: 435 MLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASW 494 LA+TG LAVMC K++G+ GAPR A A+ M+++ LL A LC+L + A W Sbjct: 434 ALAITGALAVMCVSKVFGVVCLGAPRCEAAANARPATWPMMLSHLLPALLCLLCGIGAPW 493 Query: 495 LAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRS 554 L P +A T TP A + + H V+P L+ +LLLAMPLLP L R Sbjct: 494 LIPLFARLAA--TLTPQAPLGA---------HLLVSPPLIAILLLAMPLLPLLIAAVYRG 542 Query: 555 RRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDP 603 +R A R G+AWACGYG E +M + G QPLRV+F+ L+ LRQ L P Sbjct: 543 KRQARRTGGEAWACGYGHEASMVITATGFAQPLRVMFAPLYALRQTLQP 591 >UniRef50_A8GEJ3 NADH dehydrogenase (Quinone) n=2 Tax=Enterobacteriaceae RepID=A8GEJ3_SERP5 Length = 622 Score = 312 bits (800), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 234/582 (40%), Positives = 340/582 (58%), Gaps = 22/582 (3%) Query: 35 SGITSLVGGVIGIISGITQLHAGVTLVARFAP----PFEFADLTLRMDSLSAFMVLVISL 90 S +++L+ GV +I I L A V ++ FAP + + + L+A ++LV++L Sbjct: 34 SRVSTLLSGVT-LICAIATLLAAVQML--FAPLHSAHLPWLHYAVEISGLNALLLLVMAL 90 Query: 91 LVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWF 150 V +LY + + + N+ +A++ A ++ DNA ++L E+ +L +F Sbjct: 91 CGVFAALYHAGSLSRLNPRARGRLAGLSNLMLAALSAAVMADNALALLLLLELAALCGYF 150 Query: 151 LVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRTLSLSPGLASAV 210 L++ S+ AG F + +G++L+++AF L+ S SL F+ R L L +AV Sbjct: 151 LIVHAPSAKSLRAGHSQFLLMRSGTLLLVVAFALIYCHSHSLQFSVIRATPLPDALRNAV 210 Query: 211 FLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTG 270 FLLA GFG AG+MPLH+W+P++H +AP+ A+ L S ++K+G+ GILK+ +DLL Sbjct: 211 FLLALAGFGIFAGLMPLHAWVPQSHSSAPASAAMLFSSALMKVGLLGILKIGLDLLGTP- 269 Query: 271 LPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHD 330 PLWWG+LV+ + A +A G LYAL E D++RLLA+ T+EN+GIILL +G AMVG +L Sbjct: 270 -PLWWGLLVLLLAAGTAFFGGLYALMEHDLRRLLAYHTLENIGIILLGIGGAMVGTALQQ 328 Query: 331 PLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLI 390 PLLT L+G LFHLLNH+LFK L L AGAI + DMEKMG LA+ MPWTA + LI Sbjct: 329 PLLTAFALIGGLFHLLNHSLFKSALLLAAGAIEQQTGLKDMEKMGGLARLMPWTAVSLLI 388 Query: 391 GCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKM 450 G +A++A+PPLNGF SEW +Q LF S L GP+ V LA+TG LAVMC K+ Sbjct: 389 GLVAMAALPPLNGFASEWLIYQGLFHFSAAPGFIGHLFGPLLAVALALTGALAVMCVSKV 448 Query: 451 YGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTP 510 +G+ F GAPR A A + M ++ L A LC++ L A W+ P F Sbjct: 449 FGVAFLGAPRCDAAANAVQANVWMTLSHALPALLCLVCGLGAPWIIPL-------FARLI 501 Query: 511 PATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGY 570 T ++L T + LLL + L L+ Y ++RR R G AWACGY Sbjct: 502 GLTSEQTLSLSDTLVSTPLIAILLLAMPLLPLLIAARY----QTRRQPRRVQGSAWACGY 557 Query: 571 GWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTL--RLNKG 610 G E+AM + G QPLRV+F+ L++LR+ L + RL++ Sbjct: 558 GHEDAMVITATGFAQPLRVMFAPLYQLRRWLPGSFGDRLHRN 599 >UniRef50_A6Q6W0 Ni-Fe hydrogenase, membrane subunit HycC/HyfB n=4 Tax=Bacteria RepID=A6Q6W0_SULNB Length = 627 Score = 312 bits (800), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 205/608 (33%), Positives = 330/608 (54%), Gaps = 22/608 (3%) Query: 75 LRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNA 134 + D+LS V +I L + YS Y+ E K + +F FI SM+ ++V NA Sbjct: 2 FQFDTLSVIFVALILLGAIPNLFYSHGYLPHIERKIHYQLHYFA--FILSMLGVVVSANA 59 Query: 135 FWFIVLFEMMSLSSWFLVIAR-QDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLD 193 F++ +E+MSL+SW L++ ++K +I A YF + H G V +++ FL++ + Sbjct: 60 LVFLLFWELMSLTSWQLILTEAKEKKTIEAAKFYFIMTHFGFVFLLLFFLIVTDGDLEIG 119 Query: 194 FASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKI 253 FA+ ++ + + +F GF +KAG +PLH WLP AHP APS SALMSGVM+K+ Sbjct: 120 FAAMHGIASAFAYPTLLFFFLILGFLSKAGAVPLHVWLPYAHPEAPSPVSALMSGVMLKV 179 Query: 254 GIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVG 313 I+G+ + D+L PL WGI+++ IGA+S+L+GVLYAL+E DIK LLA ++EN+G Sbjct: 180 AIYGMFRFLFDVLYP--WPLEWGIVILVIGALSSLVGVLYALSEHDIKALLANHSIENIG 237 Query: 314 IILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEK 373 IIL+ G+ M+ S+H +L+ + ALFH NH FK LLF+GAG+++ + HT ++EK Sbjct: 238 IILMGFGMGMIFDSMHLKVLSSFAFIAALFHTFNHMSFKSLLFMGAGSVLHQTHTKNIEK 297 Query: 374 MGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAM 433 G L K MP TA L+ ++ISA+PP NGF+SEW +QS+ S + ++L+LA P A+ Sbjct: 298 YGGLIKSMPITALTFLLASISISALPPTNGFLSEWMIFQSMLGSSHLGNMSLKLAIPFAI 357 Query: 434 VMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLA----ALCVLIA 489 LA+TGGLA+ CFVK YGITF G RST+A+ A EV M ++L+A +L + Sbjct: 358 FALAMTGGLAIACFVKAYGITFLGLHRSTNAKHAHEVNFLMRSGLILMALVVISLMLFTP 417 Query: 490 LSASWLAPKIMHIAH--AFTNTPPATV--ASGIALVPGTFHTQVTPSLLLLLLLAMPLLP 545 +W ++ + H + P V +++ G V+P +LL L+ + L Sbjct: 418 FYIAWFDKGLVALGHLSVYDKIFPERVLHMHSVSMHGGV----VSPLILLAALIGVTAL- 472 Query: 546 GLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQL-DPT 604 ++ R W CGY + G P+R F+ L++ + T Sbjct: 473 ---LMFAYKTLKVKERVHHTWGCGYRTSAKTQYTATGFAGPIRRFFNWLYKPEEHFCKET 529 Query: 605 LRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALV 664 L ++ + +P ++ + + A ++ + L + Y + ++ Sbjct: 530 LAGHESKFSSSHYEVHVKPLFETSLYNSVSKAANAISYWVYRLSHFEQTRYAAMIFNLML 589 Query: 665 VLLIAIAV 672 ++L + + Sbjct: 590 MVLFSYRI 597 >UniRef50_C7LSU3 NADH dehydrogenase (Quinone) n=2 Tax=Bacteria RepID=C7LSU3_DESBD Length = 577 Score = 311 bits (798), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 222/604 (36%), Positives = 330/604 (54%), Gaps = 39/604 (6%) Query: 75 LRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEG-KGAAAMGFFMNIFIASMVALLVMDN 133 +R+D++SAF +L+++++ + YS TY + + + A + + +ASM +L N Sbjct: 1 MRLDAISAFFLLLLAVVGASGAFYSRTYWSQKKHPRSARQSRLWWSAMLASMGMVLTQSN 60 Query: 134 AFWFIVLFEMMSLSSWFLVIARQDKTSINA-GMLYFFIAHAGSVLIMIAFLLMGRESGSL 192 F+ +E +LS++FLV +D + A G LY +HAG++ + F + ++GS Sbjct: 61 GLHFLFAWESFALSAYFLVTLERDNPKVRAAGRLYLVASHAGTLALFGFFTSLAAQTGSW 120 Query: 193 DFASFRT-LSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMV 251 + + SL+P +F +A GFG KAG+ PLH WLP AH APSH SA+MSGV + Sbjct: 121 ELGPMTSQTSLAP-----LFWVALLGFGIKAGVFPLHIWLPSAHANAPSHVSAIMSGVAI 175 Query: 252 KIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVEN 311 K+GI+G+++ + L LP G +V +G +SA+LGV +AL + D+KRLLA+ +VEN Sbjct: 176 KMGIYGLVRFSSWL----PLPAGAGWVVAGLGCVSAVLGVAFALGQHDVKRLLAYHSVEN 231 Query: 312 VGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDM 371 +GIIL+ +G AM+ L P ++ L G L H+ NH LFK LLFLGAGA++ T +M Sbjct: 232 IGIILIGLGFAMIALDQGRPEWGLLALSGGLLHVWNHGLFKALLFLGAGAVLHSTGTREM 291 Query: 372 EKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPI 431 ++G L K MPWTAA +G +AIS +PPLNGF+SEW + LF R+ A A P Sbjct: 292 SRLGGLWKTMPWTAALFTLGAMAISGLPPLNGFVSEWLIFSGLFDAGRLRTAASLGAVP- 350 Query: 432 AMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALS 491 A ++L VTG LA+ CFVK+ G+ F GAPRS A A+E M AM +LA C++I L+ Sbjct: 351 AAILLGVTGALALACFVKVCGVVFLGAPRSEAAANARECGTGMRAAMGVLALGCLIIGLA 410 Query: 492 ASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLW 551 ++ P ++ +A + T P SGIA + P LLA+ +L Sbjct: 411 PAFFWPTLLRVAGVWAQTAP---DSGIA-------NHLAPLGTAHALLALAILATAAAAI 460 Query: 552 CRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFR------LRQQLDPTL 605 R RR W CGY AP+ MQ F+ + LR + +L Sbjct: 461 ALLRGRQTRR--QTWDCGY-----RAPTAR--MQYTAGSFAGIITAWFGWILRPSVHASL 511 Query: 606 RLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVV 665 + A + + E E+V+ P ++ RLA + Q G + Y LY+ AALV+ Sbjct: 512 PEDIFPARSRLESHTPETV-LEQVVTPAANSILRLADFARTFQHGRVQSYLLYLCAALVM 570 Query: 666 LLIA 669 L IA Sbjct: 571 LSIA 574 >UniRef50_A6UVK0 NADH dehydrogenase (Quinone) n=2 Tax=cellular organisms RepID=A6UVK0_META3 Length = 723 Score = 311 bits (797), Expect = 5e-83, Method: Compositional matrix adjust. Identities = 215/605 (35%), Positives = 344/605 (56%), Gaps = 37/605 (6%) Query: 73 LTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGF-FMN--IFIASMVALL 129 ++ ++D +S F V+ L+ ++ ++YS YM + + K A GF ++N + +ASMV + Sbjct: 137 ISFKIDPISMFFSAVVLLVSIMAAIYSYGYMDDKKRK--LATGFQYLNFAVLVASMVGVT 194 Query: 130 VMDNAFWFIVLFEMMSLSSWFLVIARQDKTSI-NAGMLYFFIAHAGSVLIMIAFLLMGRE 188 + +N+ F++ +E+MS+SS+ LV+ K + +G +Y HAG + I +F L Sbjct: 195 ISNNSIIFLLFWELMSISSFLLVMFDGFKEEVRKSGYIYLIYTHAGGMFIFASFALAYVA 254 Query: 189 SGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSG 248 +GS+ F F ++ L AVFLL F GF +KAG+ P HSWLP AHP APSH SA+MSG Sbjct: 255 TGSISFDQFS--NMPDYLKIAVFLLGFVGFASKAGVFPFHSWLPYAHPVAPSHVSAVMSG 312 Query: 249 VMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWST 308 VM+K+GI+GI+ + + L ++ G +V+ +G +S +LGV YALA+ DIKRLLA+S+ Sbjct: 313 VMIKMGIYGIIMLILLLGINN---IYIGYMVLILGILSGILGVAYALAQHDIKRLLAYSS 369 Query: 309 VENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHT 368 +EN+GIIL+ +G+ ++G H+ + ++G GAL H+LNHALFK LLF+GAGA+I T Sbjct: 370 IENIGIILIGLGIGLIGKYYHNETIALLGFAGALLHILNHALFKSLLFMGAGAMIKSTGT 429 Query: 369 HDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLA 428 H +E MG L KRMP T+ LIG LAIS IPP NGF+SE + F+ ++V L +A Sbjct: 430 HSLEGMGGLMKRMPTTSLVFLIGSLAISGIPPFNGFVSELLIYMGGFN-GLNDSVGLLIA 488 Query: 429 GPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLI 488 ++ L + GGLA CF K+ GI+F GAP++ + A+ P+ M V +LLA +C++I Sbjct: 489 STFGIIALVLIGGLATACFTKVLGISFLGAPKTKASANAKASPHVMSVPQILLALICIII 548 Query: 489 ALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLY 548 + I+ IA++ +N T S +++ P + ++L+ + L L Sbjct: 549 GIFPILFVNPIIKIANS-SNLAGITACSQLSVFPN------LTGVYIILIALVSLFVVLR 601 Query: 549 WLWCRSRRAAFRRTGDAWACGYGWENA-MAPSGNGVMQPLRVVFSALFRLRQQLDPTLRL 607 ++ +++ G W CGY + M + + P+ F ++ P Sbjct: 602 MIYYKNKIV----DGYTWDCGYSNPTSKMQYTASSYASPIVEFFKPFVIIKTHEKPV--- 654 Query: 608 NKGLAHVTARAQS-----TEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAA 662 KG+ A+ S E ++ +I+PI I++L+ G+F Y YV+ Sbjct: 655 -KGIFPHEAKYHSHSKDLAEAVFELLLIKPISVGLSV----IRYLKDGNFNYYMGYVIII 709 Query: 663 LVVLL 667 + +LL Sbjct: 710 ISLLL 714 >UniRef50_Q21AT7 NADH dehydrogenase (Quinone) n=16 Tax=Alphaproteobacteria RepID=Q21AT7_RHOPB Length = 687 Score = 311 bits (796), Expect = 6e-83, Method: Compositional matrix adjust. Identities = 201/534 (37%), Positives = 314/534 (58%), Gaps = 13/534 (2%) Query: 75 LRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNA 134 R+D+L+AF + V++L V SLY+L Y ++E + FF F+A M +++ +A Sbjct: 92 FRLDALAAFFLGVVNLGGAVASLYALGY-GQHETAPQRVLPFF-PAFLAGMNLVVLAADA 149 Query: 135 FWFIVLFEMMSLSSWFLVIAR-QDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLD 193 F +++ +E MSL+SW LV+ ++ + AG +Y +A G++ +++AF L+ +G Sbjct: 150 FSYLLCWEFMSLASWALVMTHHREPGNARAGYVYLLMASFGTLALLLAFGLLAGPAGDYG 209 Query: 194 FASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKI 253 FA+ R + +P A+ V +L G G+KAG++PLH WLP AHPAAPSH SALMSGVM K+ Sbjct: 210 FAAIRAMPHAPAEATLVLILMLLGAGSKAGLVPLHVWLPLAHPAAPSHVSALMSGVMTKV 269 Query: 254 GIFGILKVAMDLLAQTGLPLWWG-ILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENV 312 ++G ++V DLL G P W +LV+++G ++A++G+LYAL E+D+KRLLA+ST+EN+ Sbjct: 270 AVYGFIRVVFDLL---GPPNWTASVLVLSLGGVTAVMGILYALLEKDLKRLLAYSTIENI 326 Query: 313 GIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDME 372 GII + +G+A+ + L + ALFH+ NH+LFK LLF GAGA++ DM+ Sbjct: 327 GIIFVCLGLALAFQANGQTLAASLAFTAALFHVFNHSLFKSLLFFGAGAVLVATGARDMD 386 Query: 373 KMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIA 432 ++G L RMP T+ LIGC+AISA+PP NGF+SEW +Q++ + L++ P Sbjct: 387 RLGGLIHRMPVTSVVFLIGCVAISALPPFNGFVSEWLMFQAVLLSPSLPQWGLKIMVPAI 446 Query: 433 MVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSA 492 +LA+ LA CFVK YG++F PRS A AQEV + AM++LA+LC+L + Sbjct: 447 GALLALAAALAAACFVKAYGVSFLSRPRSDAAANAQEVDRFSLAAMVILASLCLLAGIFP 506 Query: 493 SWLAPKIMHIAHAFTNTPPATVA--SGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWL 550 + + + ++ A + ++++P LL+L +A+ L +L Sbjct: 507 GLVIDALSPVTQQILDSRLAVQSHLPWLSIIPIAERRGSYNGLLVLAFIAISA--SLGYL 564 Query: 551 WCRSRRAAFRRTGDAWACGYGWENAMAP-SGNGVMQPLRVVFSA-LFRLRQQLD 602 R + R AW CG+ A S + QPLR VF LF R+ ++ Sbjct: 565 AIRRFSSHAVRRAPAWGCGFSDAVPQAQYSPDSFAQPLRRVFGTLLFAAREHVE 618 >UniRef50_C4UKF4 NADH dehydrogenase (Quinone) n=1 Tax=Yersinia ruckeri ATCC 29473 RepID=C4UKF4_YERRU Length = 579 Score = 309 bits (792), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 189/451 (41%), Positives = 278/451 (61%), Gaps = 15/451 (3%) Query: 27 LDRLAIKLSGITSLVGGVIGIISGI---TQLHAGVTLVARFAPPFEFADLTLRMDSLSAF 83 +DR +K+S + S +GG + ++GI TQL T P F+ L+A Sbjct: 25 VDR--VKVSSLISGLGGAVASLAGILAATQLLLAGTAQQIRLPLVHFSA---EFSRLNAL 79 Query: 84 MVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEM 143 ++L IS+ + CSLYS ++ A G ++ +A++ A ++ NA I++ E+ Sbjct: 80 LLLAISVTSLFCSLYSCAWLANTHRCQRARTGLLCHLLMAALTAAVISANAVELILMMEL 139 Query: 144 MSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGS-----LDFASFR 198 +L ++FL++ D+ S A + F G++ +++AF ++ SGS L F S R Sbjct: 140 AALCAYFLILQADDEKSRRAALNQFLSGRFGTISLILAFAVLHYASGSQGFDSLSFESLR 199 Query: 199 TLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGI 258 S G+ S FLLA GFG AG++PLH+W+P++H +AP+HA+AL S ++K+GI G+ Sbjct: 200 HTEFSGGVKSVAFLLALIGFGLYAGIIPLHAWVPQSHSSAPAHAAALFSSALMKVGILGV 259 Query: 259 LKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLA 318 +K+ +DLL PLWWG++V+ + ++A LG LYAL E DI+RLLA+ T+ENVGIILL Sbjct: 260 IKIGLDLLGAP--PLWWGVVVLLLAILTAFLGGLYALMEHDIRRLLAYHTLENVGIILLG 317 Query: 319 VGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALA 378 +G AMVG++L P L + LL LFHL NH LFK LFLGAG + + DMEK+G +A Sbjct: 318 IGGAMVGVALKRPELASLALLAGLFHLFNHGLFKTTLFLGAGEVELQTGIKDMEKLGGIA 377 Query: 379 KRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAV 438 RMPWT A LI ++++A+PPLNGF SEW +QSLF LS +L GP+ V LA+ Sbjct: 378 YRMPWTTIAMLIALMSMAALPPLNGFASEWLLYQSLFQLSSSPMFITRLLGPLLAVGLAL 437 Query: 439 TGGLAVMCFVKMYGITFCGAPRSTHAEEAQE 469 TG LA+MC K++G+TF G PRS A +A + Sbjct: 438 TGALALMCIAKVFGVTFLGTPRSQAASDATQ 468 >UniRef50_D0ZDU7 Formate hydrogenlyase subunit 3 n=2 Tax=Edwardsiella RepID=D0ZDU7_EDWTE Length = 633 Score = 308 bits (790), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 247/614 (40%), Positives = 357/614 (58%), Gaps = 25/614 (4%) Query: 1 MDALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTL 60 M LQL L LYL +++ +L G+ RL +++ ++ + G A + Sbjct: 1 MSILQLFNLMLALYLCSAVIALAFSGIGRLGARIAAAGG----LLAGLCGSAAAAALLLQ 56 Query: 61 VARFAPP-FEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMN 119 +F P F L + L+ M+L+ SL+ ++C+L + + R GK AA G MN Sbjct: 57 APQFPPAILLFNRLPVLFSPLNNLMLLLTSLISLLCALSAFSVSRHDTGK-AARSGCLMN 115 Query: 120 IFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIM 179 + A++ L+V ++A F+V+ E+MSLS+ LV + A LY+ ++ GS+ ++ Sbjct: 116 LLSAAISLLVVSNDAPTFMVMLELMSLSAALLVCQGGSAKARRAAGLYWLMSRLGSLALL 175 Query: 180 IAFLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAP 239 + F L+ R S +L + F SLS S V LL GFG G++PLH W+P H AP Sbjct: 176 LCFWLLWRASDTLLLSEFHLASLSHAQQSIVLLLGLLGFGIVTGLVPLHGWIPELHAHAP 235 Query: 240 SHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAI-------SALLGVL 292 + A+ L + VM+KIG+FG+LK+++D W G+ + G + +A +G L Sbjct: 236 APAATLFASVMLKIGLFGLLKLSID---------WLGVPPLWWGLLLLCCGALTAFIGGL 286 Query: 293 YALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFK 352 YALAE D++RLLA+ TVEN GIILL + ++G++L PLL V+GLL LFHL+NH LFK Sbjct: 287 YALAEHDLRRLLAYHTVENSGIILLGLSACVIGVALGSPLLAVMGLLAGLFHLINHTLFK 346 Query: 353 GLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQ 412 G LF G GA+ HD++KMG L +RMP L+ +A++A+PPL+GF+SEWYT+Q Sbjct: 347 GGLFFGTGALTHATGLHDIDKMGGLLRRMPLLGLMMLLALMAMAALPPLSGFVSEWYTYQ 406 Query: 413 SLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPN 472 SLFSLS+ A AL+L P+AMV LA+ G LAVMC K++G+TF GAPRS A P Sbjct: 407 SLFSLSQRGAGALRLLAPLAMVALAIAGALAVMCVAKIFGMTFLGAPRSEAAANPGATPW 466 Query: 473 TMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVA--SGIALVPGTFH-TQV 529 M++ LLL+ CVL + A W+ P ++ ++ + A G + PG+ + T + Sbjct: 467 NMLLPTLLLSLCCVLFGVGAPWVVPALLRLSAQVLQLAIGSDALTMGAIMSPGSGNLTLL 526 Query: 530 TPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRV 589 +P L+ LLLLA PLLP L R R RR GDAW CGYG E M + G QPLRV Sbjct: 527 SPPLMTLLLLAFPLLPLLLSALYRGSRLPARRHGDAWTCGYGHEAGMVVTAGGFAQPLRV 586 Query: 590 VFSALFRLRQQLDP 603 +FS LF LR+ +P Sbjct: 587 LFSPLFALRRVCNP 600 >UniRef50_B3E6C5 NADH dehydrogenase (Quinone) n=4 Tax=Desulfuromonadales RepID=B3E6C5_GEOLS Length = 666 Score = 307 bits (787), Expect = 8e-82, Method: Compositional matrix adjust. Identities = 221/607 (36%), Positives = 334/607 (55%), Gaps = 23/607 (3%) Query: 67 PFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYM-REYEGKGAAAMGFFMNIFIASM 125 P F L +D LSA +L + L + CSLY L Y+ + + F + +ASM Sbjct: 74 PLPFGPSELSVDPLSALFLLPLLLAALCCSLYGLAYLPAAVQPAVEKRVTLFSGLLLASM 133 Query: 126 VALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSIN-AGMLYFFIAHAGSVLIMIAFLL 184 +LV + ++ +E+M+LSSW L++ Q + AG +Y H GS+ + + F L Sbjct: 134 ALVLVARDGLLLLIAWEVMALSSWLLLMTDQQNLQVQRAGTVYLLATHTGSMALYVFFAL 193 Query: 185 MGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASA 244 + E+GS F + +L+L + + + A GFGAKAG+MPLH WLP AH APSH SA Sbjct: 194 LKGETGSFAFPAAHSLALGGTVTLVMLVAALIGFGAKAGIMPLHIWLPGAHANAPSHVSA 253 Query: 245 LMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLL 304 LMSG+M+K+GI+GI++ A+ Q LP+W+G LV+ +GA+SA+ G+ A A++D+KRLL Sbjct: 254 LMSGIMLKVGIYGIIR-AVSFFQQ--LPVWFGWLVLLLGAVSAITGIALASAQRDLKRLL 310 Query: 305 AWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIIS 364 A S++EN+GII + +G+A+VG+ D +L ++GL GA H++NHALFK LLFLG+GAII Sbjct: 311 ACSSIENIGIICIGLGMALVGIQSGDRVLAILGLAGAFIHIINHALFKPLLFLGSGAIIH 370 Query: 365 RLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVA 424 T +++MG L++ +P TA L+G LAI +PPLNGF+ E + + FS + Sbjct: 371 ATGTRQIDRMGGLSRILPRTAPLFLVGSLAICGLPPLNGFVGELFLYFGAFSDGMLA--D 428 Query: 425 LQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAAL 484 L + G +A + LA+ GGLAV+ FVK+YG F G PR E P M++ M LLA + Sbjct: 429 LPVIGFVAPI-LALVGGLAVITFVKLYGAVFLGVPRDPELAHGHESPLAMLLPMGLLAGI 487 Query: 485 CVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLL 544 C+L + A L + + P + VP T + LL ++LL Sbjct: 488 CLLAGIGAPLLLQLVAPAVIQYAGVSPLLFSQVAGAVPLQQLTLLNGLLLAVILL----- 542 Query: 545 PGLYWLWCRSRRAAFRRTGDAWACGY-GWENAMAPSGNGVMQPLRVVFSALFRLRQQLDP 603 ++ +W + A W CGY M +G+ + + + S L R +L Sbjct: 543 --VWLIWRFLVQRAPLAVSSTWGCGYLAPTPRMQYTGSAFSELITGLISGLVGSRGRLSG 600 Query: 604 TLRLNKGLAHVTAR--AQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVA 661 G +AR + +TE D+ +I + A LA ++ +Q G LY LYV A Sbjct: 601 L----SGAFPASARFVSITTERILDQMIIPSLQGADWCLA-WLRRMQHGHLHLYILYVFA 655 Query: 662 ALVVLLI 668 L VL++ Sbjct: 656 TLFVLMV 662 >UniRef50_B1ZSD9 NADH dehydrogenase (Quinone) n=2 Tax=Bacteria RepID=B1ZSD9_OPITP Length = 662 Score = 305 bits (780), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 212/607 (34%), Positives = 326/607 (53%), Gaps = 31/607 (5%) Query: 72 DLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGF-FMNIFIASMVALLV 130 +L +R+D++SAF +++++++ S+YS Y + +A G + + +A+M A+LV Sbjct: 65 NLHVRLDAVSAFFLVLLAVVGGAASVYSREYWSDRAHPRSARSGRAWWTLLLATMGAVLV 124 Query: 131 MDNAFWFIVLFEMMSLSSWFLVI-ARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRES 189 N F++ +E+ ++S +FL+ RQ + AG LYF +HAG++ + F L+ + Sbjct: 125 AANGLHFLIAWELFAVSGYFLITRERQRREVRAAGWLYFAASHAGTLCLFGFFTLLAART 184 Query: 190 GSLDFASFRTL-SLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSG 248 GS D + + L+P +F LA GFG KAG+ PLH WLP AH APSH SA++SG Sbjct: 185 GSWDLGAMQDRRELAP-----LFWLALVGFGVKAGLFPLHIWLPSAHANAPSHVSAILSG 239 Query: 249 VMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWST 308 V +K+GI+G+++ + L +P+ G ++ +G SA+LGV +AL + D+KRLLA+ + Sbjct: 240 VALKMGIYGLVRFSGWLP----VPVAAGWVIALLGVASAVLGVAFALGQHDLKRLLAYHS 295 Query: 309 VENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHT 368 VEN+GIIL+ +G A+V + +P + L G L H+ NH LFK LLFLGAG+++ T Sbjct: 296 VENIGIILIGLGFALVATANGEPAWGRLALAGGLLHIWNHGLFKALLFLGAGSVLHATGT 355 Query: 369 HDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLA 428 +M ++G L + MPWTA +G +AIS +PPLNGF+SEW + LF + + A Sbjct: 356 REMSRLGGLWRTMPWTAGCFTLGAVAISGLPPLNGFVSEWLVFLGLFDAAGAGGLPAWAA 415 Query: 429 GPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLI 488 P A ++L +TG LA+ CF K+ G+ F G PRS AE A E M MLLLAA CV I Sbjct: 416 VP-AAILLGMTGALALACFAKVCGVVFLGLPRSAVAEHAHESGPLMRGPMLLLAACCVAI 474 Query: 489 ALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMP--LLPG 546 L+ + P +AHA PA + +AL ++ P L L L G Sbjct: 475 GLAPVFFWPA---LAHAIDAWRPAW-SGAVALANDAGGARLNPEQAPLAALGACHVALAG 530 Query: 547 L-----YWLWCRSRRAAFRRTGDAWACGYGWENA-MAPSGNGVMQPLRVVFSALFRLRQQ 600 L + LW + RR R W CGY M + + L FS + R + Sbjct: 531 LGVVLAWVLWRQVRRNGVTRF-MTWDCGYAAPTPRMQYTAGSFAEILTGWFSWILRPQAH 589 Query: 601 LD-PTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYV 659 ++ P K H ++ F VI P+ ++ ++ LQ G + Y LY+ Sbjct: 590 VERPVGPFPKRAEHRVHTPETVLEF----VIEPVGRVVLAISGAVRRLQHGRLQFYILYL 645 Query: 660 VAALVVL 666 +V + Sbjct: 646 FVGVVAI 652 >UniRef50_A9QPJ4 Formate hydrogenlyase subunit 3 n=1 Tax=Methylacidiphilum infernorum V4 RepID=A9QPJ4_METI4 Length = 667 Score = 302 bits (774), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 180/414 (43%), Positives = 262/414 (63%), Gaps = 5/414 (1%) Query: 75 LRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNA 134 R+DSLSAF +LV++L + SLY L Y + + + F++ +F+ SM +L+ + Sbjct: 71 FRIDSLSAFFLLVVNLASFMASLYGLGYGSHF-AEQQRILPFYI-LFLGSMNMVLLAADM 128 Query: 135 FWFIVLFEMMSLSSWFLVIA-RQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLD 193 F F+ +E+MSLSSW LV++ ++K + AG +Y +A G+ ++ + L+ SG+ Sbjct: 129 FSFLFFWELMSLSSWALVMSSHKEKETAGAGFIYLLMAVLGTFALLFSMSLLASHSGTFS 188 Query: 194 FASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKI 253 F +L AS VF LA FG G+KAG++PLH+WLPRAHPAAPSH SALMSGVM K+ Sbjct: 189 FEGMSKAALPSKSASLVFALALFGAGSKAGLVPLHAWLPRAHPAAPSHVSALMSGVMTKV 248 Query: 254 GIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVG 313 ++G L++ DLL WW L++ I +S + GVLYAL + D+KRLLA+ T+EN+G Sbjct: 249 AVYGFLRIVFDLLRTQ--EKWWSYLLLVIAGVSMIAGVLYALMQHDLKRLLAYHTIENIG 306 Query: 314 IILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEK 373 I+ + +G+AM + + + +LFH+LNH+LFK LLFLGAG+I S + DMEK Sbjct: 307 IVFVGIGLAMAFKTYGMVAASALSFSASLFHVLNHSLFKNLLFLGAGSIQSSTGSRDMEK 366 Query: 374 MGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAM 433 +G L +MP+TA A L+G +AI A+PPLNGF+SEW QS+ ++ + L+ P Sbjct: 367 LGGLVSKMPYTAFAFLMGSMAICALPPLNGFVSEWLLMQSILLSPQLPSWGLKFLVPSIG 426 Query: 434 VMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVL 487 LA++ LA CF+K+YGITF G PRS A A E ++A+ LA LC+L Sbjct: 427 AFLALSAALAASCFIKVYGITFLGRPRSMSAMAATETDRWSLLALYFLAFLCLL 480 >UniRef50_A7HGW4 NADH dehydrogenase (Quinone) n=4 Tax=Anaeromyxobacter RepID=A7HGW4_ANADF Length = 654 Score = 300 bits (767), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 182/446 (40%), Positives = 265/446 (59%), Gaps = 13/446 (2%) Query: 73 LTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYE-GKGAAAMGFFMNIFIASMVALLVM 131 L LR+D+LSA +L I + + ++Y L Y R+ G + + F + A MV L+ Sbjct: 63 LGLRVDALSAIFLLPICAVSALGAIYGLGYHRQAALGARSVRLQIFYGLTTAGMVLLVSA 122 Query: 132 DNAFWFIVLFEMMSLSSWFLVIARQDKTSIN-AGMLYFFIAHAGSVLIMIAFLLMGRESG 190 +A F+V +E+M+L + LV ++ + A +Y H G++ + F L+ + +G Sbjct: 123 TSAIVFLVGWEVMALGGFLLVHTDHERAEVQRAAFVYLAATHVGTLALFALFALLRQATG 182 Query: 191 SLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVM 250 + D LS S +A F LA GFG KAG+MPLH WLP AH AAPSH SALMSGV+ Sbjct: 183 TFDLGGMAGLSGSGPVARGAFALALLGFGMKAGVMPLHFWLPGAHAAAPSHVSALMSGVL 242 Query: 251 VKIGIFGILKVAMDLLAQTGL----PLWWGILVMAIGAISALLGVLYALAEQDIKRLLAW 306 +K G++G+L+V TGL P WG ++ +G SA+LGV +ALA+ D+KRLLA+ Sbjct: 243 IKTGVYGLLRV-------TGLFDAPPAAWGTALLVLGGASAVLGVAFALAQHDLKRLLAY 295 Query: 307 STVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRL 366 +VENVGII+L G+A++G + +P L +GL GA H++NHALFK LLFLGAGA+ Sbjct: 296 HSVENVGIIVLGAGLALLGRARGEPALVALGLGGAALHVVNHALFKSLLFLGAGAVQHAT 355 Query: 367 HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQ 426 T +++++G LA+ M TA L+G AIS +PPLNGF+SEW + + L Sbjct: 356 GTRELDQLGGLARPMRATATLFLVGAAAISGLPPLNGFVSEWLVYLGFLAAMERGGDDLL 415 Query: 427 LAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCV 486 + + LA+ GGLA CF K+ G+ F G+PR+ HA A E P M+V M +LAA C Sbjct: 416 AFAVLGVPALALVGGLAAACFAKVVGVVFLGSPRTAHARAAHEAPRAMLVPMAVLAAACA 475 Query: 487 LIALSASWLAPKIMHIAHAFTNTPPA 512 I L+ + + P ++ A A++ PA Sbjct: 476 AIGLAPAAVLPALVRAASAWSRLDPA 501 >UniRef50_A7I7D4 NADH dehydrogenase (Quinone) n=3 Tax=Methanomicrobia RepID=A7I7D4_METB6 Length = 649 Score = 299 bits (766), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 200/611 (32%), Positives = 325/611 (53%), Gaps = 35/611 (5%) Query: 67 PFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAA-MGFFMNIFIASM 125 PF +T +D L+AF +++I + ++Y Y+ E EG G + +F+ +M Sbjct: 67 PFPGISVTFFIDRLAAFFLVLIGAVSACVAVYCTGYIEEMEGAGRRNILCGCTALFVFAM 126 Query: 126 VALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKT-SINAGMLYFFIAHAGSVLIMIAFLL 184 ++ F++ +E+M+ S+ LV+ + + AG+ YF + ++ +M+ +L Sbjct: 127 ALVVASATTISFLLFWELMAAVSFLLVMYDYTGSETTRAGIFYFVMTQLSTLFVMLGIIL 186 Query: 185 MGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASA 244 + +GS A + S L +A FL F GF KAG++P H WLP AHPA+PS SA Sbjct: 187 LFFATGSFAIAPAHVTAGSLPLVTAAFLALFVGFSVKAGIIPFHKWLPYAHPASPSPVSA 246 Query: 245 LMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLL 304 LMSGVM+K+ ++G+++ L+A LWWG++++ G SA+LGV+YA+ E DIK LL Sbjct: 247 LMSGVMLKVAVYGLIRF---LVAVFTPDLWWGMVILIAGITSAVLGVIYAIKEDDIKGLL 303 Query: 305 AWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIIS 364 A+S++EN+GII + +G+ ++ P+L + LL ALFH LNHALFK LLFL +G+++ Sbjct: 304 AYSSIENIGIIFVGIGLFVIFSCTGLPMLATISLLAALFHSLNHALFKSLLFLTSGSVVH 363 Query: 365 RLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVA 424 HT D+E+MG LA RMP T+A +G AI+A+PPLNGF SE + + F V Sbjct: 364 ATHTRDIEQMGGLASRMPVTSALFFVGAAAIAALPPLNGFASELLVYTAFFESVTVADPL 423 Query: 425 LQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAAL 484 +++ + + + A+T L+ CFVK +G F PRS + EA+E M+ LLA Sbjct: 424 IKILLFVCLALFALTSALSAACFVKAFGSIFLARPRSQESREAREAGRAMLAGPALLAIA 483 Query: 485 CVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLL 544 CV++ + + + +I P + S + LV G V Sbjct: 484 CVVLGVFSYQILAGFGYI----FPIPDLLLVSVLLLVMGALTYIV--------------- 524 Query: 545 PGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAP-SGNGVMQPLRVVFSALFRLRQQLDP 603 L+ + A RT + W CG A A +G+G +P+ +F+ L+R ++ + Sbjct: 525 -----LYVTASHA--ERTSETWGCGSLSLPASAEYTGHGFSEPIVTIFAPLYRTKKTVTK 577 Query: 604 TL--RLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVA 661 R + +A TA + + F++E + P+ R A + +Q+G Y LYV Sbjct: 578 NYYDRHDCIVAGGTAEIRLVK-FFEEYLYLPLARGANRAAGYVARMQNGCLDTYLLYVFL 636 Query: 662 ALVVLLIAIAV 672 A+V ++I + V Sbjct: 637 AVVAVIIFLGV 647 >UniRef50_B4UA31 NADH dehydrogenase (Quinone) n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4UA31_HYDS0 Length = 633 Score = 298 bits (764), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 192/605 (31%), Positives = 333/605 (55%), Gaps = 55/605 (9%) Query: 74 TLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDN 133 + +D LS F + +++ + S+Y+L Y+ E M NIFI SM+ +L+ N Sbjct: 66 SFYVDRLSLFFIGIVAFNGAINSIYTLDYIEEENYDKKILMTMLKNIFILSMILVLLSAN 125 Query: 134 AFWFIVLFEMMSLSSWFLVI-ARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSL 192 AF F++ +E+MS+ S+FLV+ + + + A ++Y + H G+ I+++F+ + SL Sbjct: 126 AFTFLLFWEVMSILSFFLVLWDFKKEENYKASLIYIVMTHIGTAFILLSFVGFYINTNSL 185 Query: 193 DFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVK 252 F ++ LSL+ + +FL + GFG KAG++ LH+WLP+AHP APS SALMSG+M+K Sbjct: 186 SFDHWQNLSLNTFWTTWIFLFSVLGFGMKAGIIGLHNWLPKAHPVAPSFVSALMSGLMIK 245 Query: 253 IGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENV 312 + ++ ++ + Q P +G+L++ IG I+ L G+L A + +K +LA+S++EN+ Sbjct: 246 MPVYMFIRYWFYFIKQ--YPASFGLLILTIGTITMLFGILNASVQNRLKAMLAYSSMENI 303 Query: 313 GIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDME 372 GII + +G+AM+ SL+ L + L +LFH+LNH+LFK LLF+ AG++++R HT ++ Sbjct: 304 GIIYVGIGLAMIFKSLNVEYLYALALGASLFHILNHSLFKSLLFMSAGSLMARAHTQEIA 363 Query: 373 KMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIA 432 K+G K P L+G L++ A+PP NGFISEW +QSL +V+ L +A P++ Sbjct: 364 KLGGAIKYAPKLGTITLVGMLSLVALPPFNGFISEWLLYQSLLLSLKVKGYYLWIASPLS 423 Query: 433 MVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSA 492 LA+TGG+A++ VK +G+TF G PR + +++ +++M +LA C+L+ + Sbjct: 424 ASFLALTGGIAMLSAVKYFGLTFLGNPRKD-IKRKEDIKTMSLISMGILALSCLLVGVLP 482 Query: 493 SW-------LAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLP 545 + L P +H+ F P S + P + +L++ M LL Sbjct: 483 VFVLDVINNLIPVPIHVNGIFEIKTPENFGS------------IAPFFIGILMVFM-LLI 529 Query: 546 GLYWLWCRSRRAAFRRTGDAWACGYGWEN---AMAPSGNGVMQPLRVVFSALFRLRQQLD 602 +Y S+ + + +T WACG E+ + S G QP++ + S L++ Sbjct: 530 SIYLNKYISKHSIYYKT---WACGQ--EDVPLSAQYSPEGFSQPIKKITSKLYK------ 578 Query: 603 PTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAA 662 L + G+ A++ +++ Q L +I Q+G +Y LY+ Sbjct: 579 DGLDIFDGIYGFIAKS--------------LLNKLQTLKYKI---QTGVIHVYILYMAIT 621 Query: 663 LVVLL 667 L++L+ Sbjct: 622 LIILI 626 >UniRef50_C6MX91 NADH dehydrogenase (Quinone) n=1 Tax=Geobacter sp. M18 RepID=C6MX91_9DELT Length = 657 Score = 297 bits (761), Expect = 8e-79, Method: Compositional matrix adjust. Identities = 168/407 (41%), Positives = 251/407 (61%), Gaps = 8/407 (1%) Query: 70 FADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALL 129 F + +D LS F ++ I L+ SLY+L Y ++ FF + +M ++ Sbjct: 75 FGPCEVALDPLSLFFLIPIFLVFPAGSLYALGYWPAASHSSEKSVTFFYGLLAFAMALVV 134 Query: 130 VMDNAFWFIVLFEMMSLSSWFLVIARQDKTSI-NAGMLYFFIAHAGSVLIMIAFLLMGRE 188 V N F++ +E M+LS +FL+IA + + +AG++Y +H G +++ F + R Sbjct: 135 VARNGALFMMAWETMALSGYFLLIAEHREGEVRSAGLVYLVASHLGGAALLLLFASLFRI 194 Query: 189 SGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSG 248 +G F + +L+L+ GLA +F LA GFG+KAG+MPLH WLP AH APSH SAL+SG Sbjct: 195 TGGFGFPAAHSLALAAGLAGTIFALALAGFGSKAGLMPLHLWLPSAHANAPSHVSALLSG 254 Query: 249 VMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWST 308 VM+KIG++GIL+V + + PLWWG L+ A G SA++G+ A A++DIKRLLA+S+ Sbjct: 255 VMLKIGVYGILRV-ISFFPER--PLWWGALLTAAGLTSAVMGICVASAQKDIKRLLAYSS 311 Query: 309 VENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHT 368 +EN+GI+ +G+ ++G + L +GL GALFH+LNHA+FK LLF AG+++ T Sbjct: 312 IENLGIVTTGIGMFLLGQGTGNHRLAFLGLAGALFHVLNHAIFKPLLFFCAGSVMHATGT 371 Query: 369 HDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLA 428 D+++MG LA+R+P+TA L G +AI +PP NGF SE + F +R L L Sbjct: 372 RDLDRMGGLARRLPFTAFFALCGAVAICGLPPFNGFASEMLLYLGFFGEARAGQPYLALG 431 Query: 429 GPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMI 475 P+ LA+ GG+AV+ FVK+YGI F GAPR+ A E +M+ Sbjct: 432 APV----LAMVGGVAVLSFVKLYGIAFLGAPRTEAAAHGHEATGSML 474 >UniRef50_C6PUG7 NADH dehydrogenase (Quinone) n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PUG7_9CLOT Length = 594 Score = 294 bits (752), Expect = 8e-78, Method: Compositional matrix adjust. Identities = 186/583 (31%), Positives = 330/583 (56%), Gaps = 33/583 (5%) Query: 97 LYSLTYMREYEGKGAAAMGF-FMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIAR 155 +YS+ Y EY+GK + F M +F ASM+ +++ ++ FIV +E+MS S+FLV+ Sbjct: 32 IYSIGYTAEYKGKYSVKYNFMLMLLFAASMLCVVLARDSITFIVFWEVMSAVSFFLVVYE 91 Query: 156 -QDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRTLSLSPGLASA--VFL 212 ++K +I +G++YF + H + +MI F + + +GS+ F F LS ++ +F Sbjct: 92 YKNKENIRSGIMYFIMTHISGLFLMIMFAFLYKYTGSISFDKFYQLSNDFTISQKYIIFT 151 Query: 213 LAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLP 272 A GFGAKAG++PLH WLP+AHP+APS+ASALMSGVM+K+ I+G+++V + L Sbjct: 152 FAILGFGAKAGLLPLHGWLPKAHPSAPSNASALMSGVMLKVAIYGLIRVTFTFIKVLPLK 211 Query: 273 LWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPL 332 +L++ +GA++A+ VL AL ++DIK+LLA+S+ EN+GII+ +G+++V +L+ Sbjct: 212 AA--LLLVLLGAVTAIFSVLNALVQKDIKKLLAYSSAENIGIIISTLGLSLVFYNLNLNS 269 Query: 333 LTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGC 392 + L+ ALFH+ NHA+FK LLF AG+++ T +M ++G L K+M + A IG Sbjct: 270 FANLTLIAALFHIFNHAIFKSLLFASAGSVLYSTGTKNMNELGGLYKKMKFAAICAFIGT 329 Query: 393 LAISAIPPLNGFISEWYTWQS-LFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMY 451 AISAIPPLNGF SE ++ + + ++ L + +++A+T G+ + VK + Sbjct: 330 AAISAIPPLNGFASEILIFKCFIIGTASIKGTWTALIIIGSGLIIALTSGVTLYASVKSF 389 Query: 452 GITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPP 511 GIT+ GAPRS A A ++P +M + + +LA LC++ + + ++ I ++++ NT Sbjct: 390 GITYLGAPRSEKAINAHKIPLSMNIGLGILALLCIISGVFSPFIINLISKVSNSILNTNL 449 Query: 512 ATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYG 571 + S I + +L L++ L +++A + + W CG+ Sbjct: 450 PLMNSEINNEIIIVSSIFVIITAILALISKVL---------NNKKATVIK--ETWGCGFN 498 Query: 572 W-ENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRL---NKGLAHVTARAQSTEPFWDE 627 ++ M S NG+ QP +F + R +++ + +K L ++ E + Sbjct: 499 NVKSNMQYSANGLSQPSTRIFGKVVRYEKEVKNGYSILLKDKVLDNI-------EKYIYG 551 Query: 628 RVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLIAI 670 V++ + + R+ K + G ++Y Y+ +L+V ++ + Sbjct: 552 SVVKVVYYISLRVTK----IHFGKIQVYVSYIFVSLLVTVLIV 590 >UniRef50_UPI00003845F5 COG0651: Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI00003845F5 Length = 581 Score = 293 bits (751), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 177/436 (40%), Positives = 262/436 (60%), Gaps = 7/436 (1%) Query: 75 LRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNA 134 R+D+LSA ++V++L S Y + Y F +F+ M +L+ D+A Sbjct: 44 FRLDNLSALFMVVVNLASAAASAYGIGYCSHLPEPRRVTP--FYPLFLFGMNTVLIADDA 101 Query: 135 FWFIVLFEMMSLSSWFLVIA-RQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLD 193 F F+V +E MSLSSW LV+A ++ + A +Y +A G+ ++ F LM G+ Sbjct: 102 FMFLVAWEFMSLSSWLLVLADHKNAENRRAAFVYLVMACFGTFCLLTCFGLMAGGEGAYS 161 Query: 194 FASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKI 253 F++ R L V LLA G G+KAG++PLH+WLP AHPAAPSH SALMSGVM K+ Sbjct: 162 FSAMRAAKLDGIAGFLVVLLALLGAGSKAGLVPLHAWLPLAHPAAPSHVSALMSGVMTKV 221 Query: 254 GIFGILKVAMDLLAQTGLPLW-WGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENV 312 ++G++++ DL W WG +M IG I+A++GVLYA+ + D+K+LLA+STVEN+ Sbjct: 222 ALYGLIRILFDLHGHVN---WAWGAAMMVIGGITAVMGVLYAILQDDLKKLLAYSTVENI 278 Query: 313 GIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDME 372 G++++ +G+A+ + L + L+ L+H++NH++FK L FL AGA+I+ D+ Sbjct: 279 GVVVIGLGLAIAFKGSGEKTLAALALVAGLYHIVNHSIFKTLWFLSAGAVITATGERDLG 338 Query: 373 KMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIA 432 K+G L KRMPW A L+G +AISA+PPLNGF+SEW +QSLF + A++ P+ Sbjct: 339 KLGGLTKRMPWNGVAALVGAIAISALPPLNGFVSEWLIFQSLFKGPSLPHWAMKFGVPVV 398 Query: 433 MVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSA 492 MLA+ LA CFV+ YGI F G PRS A +A +VP TM + LLA LCV++ Sbjct: 399 GAMLALAAALAAACFVRAYGIAFLGRPRSEAAAQAHQVPATMRWTVALLAVLCVVLGAIP 458 Query: 493 SWLAPKIMHIAHAFTN 508 + + H+ T Sbjct: 459 VTITDALSHVVTPLTG 474 >UniRef50_B6WWH3 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WWH3_9DELT Length = 670 Score = 291 bits (745), Expect = 6e-77, Method: Compositional matrix adjust. Identities = 215/610 (35%), Positives = 323/610 (52%), Gaps = 31/610 (5%) Query: 71 ADLTLRMDSLSAFMVLVISLLVVVCSL---YSLTYMREYEGKGAAAMGFFMNIFIASMVA 127 L+L +D+LS +L + L VC+ SL + R E AA F++ + + M Sbjct: 73 GSLSLGLDALSRVFLLPVFGLGFVCACAGGISLRHTRASEHNLAAHWLFYL-LLVLGMAV 131 Query: 128 LLVMDNAFWFIVLFEMMSLSSWFLV-IARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMG 186 +++ +A F++ +E+MSLS +FL+ D+ +A +Y AH G+VL++ F L+ Sbjct: 132 VMMARDAVLFLLAWEVMSLSPFFLIDFNDSDRNVRDASWVYLVAAHLGAVLLLAFFGLLW 191 Query: 187 RESGSLDFASFRTLSLSPG----LASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHA 242 + +G FA L+L G LAS +F+L+ GFGAKAG+ P+H WLP AHPAAPSH Sbjct: 192 QNAGDTAFA---VLALKEGPVVPLASVLFVLSLLGFGAKAGIAPMHVWLPEAHPAAPSHI 248 Query: 243 SALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKR 302 SAL+SG M+ G++GI++ + + P WWG L + +G +AL+G+L ALA+ ++KR Sbjct: 249 SALLSGAMINAGLYGIIRSCEFVAPLSAAPAWWGWLTLFLGLGTALMGILKALAQSNLKR 308 Query: 303 LLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAI 362 LLA+S+VEN+G++L+ VG ++G + + +GL GA+FH+LNH+ FKGLLFL AG + Sbjct: 309 LLAYSSVENMGLMLMGVGAWLIGSHSGNSWIGTLGLAGAMFHMLNHSAFKGLLFLTAGEV 368 Query: 363 ISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEA 422 + T ME +G L +RMP AA IG ++I+ PP NGF E+ SL S + Sbjct: 369 LHATGTVRMELLGGLQQRMPLVGAAFGIGAVSIACFPPFNGFAGEFVLALSLLDGSSLPG 428 Query: 423 VALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLA 482 V QL +A+V+L + GLA + K YGITF GAPRS EEA + + + A Sbjct: 429 VEQQLGLLMALVVLGLVSGLAAATYAKAYGITFLGAPRSRCVEEAHRPRPRDLWPLAIPA 488 Query: 483 ALCVLIALSAS----WLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLL 538 LCV L++ WL + N P +G ++ T SL+ ++L Sbjct: 489 FLCVAGGLASGHCFRWLISTV--------NAPLPDPVAGQQVMLRVADMLGTVSLVGMVL 540 Query: 539 LAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVM-QPLRVVFSALFRL 597 LA+ L C + R RR + W CGY + + +PL +F L Sbjct: 541 LALVAALWLLRKACIAGR--LRRE-ETWGCGYQYGTPRVQYTDASFSEPLGRIFGGAMGL 597 Query: 598 RQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCL 657 + + R G A V A S + P+ ++L + LQ G LY L Sbjct: 598 KVHQELDGRYFPGKASV---AISAPDRLRTGLFTPLFEGVEKLCNMCKILQHGKIHLYIL 654 Query: 658 YVVAALVVLL 667 Y++A LV LL Sbjct: 655 YILATLVALL 664 >UniRef50_D1B457 NADH/Ubiquinone/plastoquinone (Complex I) n=2 Tax=Campylobacterales RepID=D1B457_SULD5 Length = 646 Score = 288 bits (738), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 195/605 (32%), Positives = 326/605 (53%), Gaps = 28/605 (4%) Query: 55 HAGVTLVARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGA-AA 113 H TL+ + F A L R++ L F ++S++ SL+S Y + YE K A Sbjct: 47 HLSDTLIWKLPGSFISAPL-FRLEPLGMFFSFLVSMIAFAVSLFSFDYAKFYEKKANLAV 105 Query: 114 MGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHA 173 N FI SM+ ++ DN F F++L+E+M+L S L++ K S M+Y IA Sbjct: 106 FASLFNAFILSMLLVVASDNVFSFMLLWEVMTLLSALLILINDGKESSKNIMIYLGIAQI 165 Query: 174 GSVLIMIAFLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPR 233 G+ +M+A L+M + S +F+ F +++ G + +F+L G G+KAGM P H WLP Sbjct: 166 GAFCLMVALLIMASFADSFEFSHFNEMNIGFGASLTLFVLLLVGLGSKAGMFPFHVWLPV 225 Query: 234 AHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLW--WGILVMAIGAISALLGV 291 A+ PS+ASALMSGVM+K+ +F +K ++ L P W +G +++ +GA+S + G+ Sbjct: 226 AYCECPSNASALMSGVMIKVALFAFIKFSLLL------PQWVHFGYILLFMGALSCVFGI 279 Query: 292 LYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALF 351 +YAL D K +A+S+ ENVGII L +G A GL + P L ++G + A FH+LNH++F Sbjct: 280 MYALVSNDYKASIAYSSCENVGIIFLGLGGAFYGLGANSPTLALLGFIAAFFHILNHSVF 339 Query: 352 KGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTW 411 K LLF+ +G + + T +M+ +G L K+MP T+ + +A+ A+PPLNGF SEW + Sbjct: 340 KSLLFMLSGNVYTATLTRNMDTLGGLHKKMPLTSLIFCVAVVAMCALPPLNGFASEWVIY 399 Query: 412 QSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHA-EEAQEV 470 +++ +A + A++ L++TG +A+M F K+YG F G PR EE +EV Sbjct: 400 KTMVMGGVDAGIASRFFFATAIIALSITGAMALMAFAKVYGSIFLGLPREPQKMEEIKEV 459 Query: 471 PNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVT 530 ++ + LLA+LCV + L ++ I ++ P T S H ++ Sbjct: 460 SFIRLLPLGLLASLCVGLGL---FMNDVIGMLSRMVFTLIPQTSQS--------VHGLIS 508 Query: 531 PSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVV 590 LL++++L LLP + ++ R+T + WACG+ + M N ++ Sbjct: 509 MPLLVMVMLLCALLPFFFLYLLKANHKVARQT-EPWACGFKYNPTMQIGSNAFTGDIKKA 567 Query: 591 FSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSG 650 S L R ++ ++++ + T ++ + FW E++ P++ +A +I Q+G Sbjct: 568 LSFLLRYERE----IKIDGYFSKATYTHKTHDLFW-EKLYAPVIDFIMVVADKIGVFQNG 622 Query: 651 DFRLY 655 LY Sbjct: 623 RTNLY 627 >UniRef50_C6NX32 Hydrogenase-4 component B / Formate hydrogenlyase subunit 3 n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NX32_9GAMM Length = 668 Score = 280 bits (715), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 227/690 (32%), Positives = 356/690 (51%), Gaps = 55/690 (7%) Query: 7 LTWSLILYLFASLASL--FLLGLDRLAIKLSG-ITSLVGGVIGIISGITQL-HAGVTLVA 62 L W LI + ++ F+ LD A++L G +TS + VI + +G+ L G Sbjct: 7 LAWGLIAAALGPVVTILAFVPALDAKALRLGGFLTSTIMAVISLGAGLYALLQPGSIPAT 66 Query: 63 RFAP--PFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNI 120 F P++F +D LS F +L++ ++ SL+++ Y R + + I Sbjct: 67 TFGTHIPWQF-----HLDPLSGFFLLLLGVVGSTASLHAIGYFRATQSGELRRVLIPYPI 121 Query: 121 FIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGM-LYFFIAHAGSVLIM 179 F ++M+ +++ + F+V +E+M+LSS FL+++ + LY IAH G++ ++ Sbjct: 122 FFSAMILVVLAAGVYTFMVAWELMALSSTFLILSASRAMAARRAAYLYLLIAHLGALCLL 181 Query: 180 IAFLLMGR----ESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAH 235 AF+L+ R GS + SLSP A+ L+ GFGAK GM+PLH WLP AH Sbjct: 182 GAFILLARGNPLSGGSFAVMAAAQQSLSPWATQAILGLSLLGFGAKLGMVPLHIWLPEAH 241 Query: 236 PAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYAL 295 PAAPS SALMS M+ + I+G+L++ +L+ G+ WG++ +A G ++A GVL++ Sbjct: 242 PAAPSPVSALMSAAMLPMAIYGLLRLDWQILSAPGIG--WGVIWLAFGLLTAGFGVLFST 299 Query: 296 AEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLL 355 + D+KRLLA+S++EN+G++L+A+G+ + ++ L + L LF LLNHALFK LL Sbjct: 300 LQSDLKRLLAYSSMENMGLVLVALGLGRIFVAEGWLSLAGLALCAGLFQLLNHALFKSLL 359 Query: 356 FLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLF 415 FLG+G+++ + DM ++G L + MP T LI LAI+ +PPLNGF SEW Q+ Sbjct: 360 FLGSGSVLHSTGSVDMNRLGGLIRSMPQTTLLMLIATLAIAGLPPLNGFASEWLLLQAFL 419 Query: 416 SLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRST-HAEEAQEVPNTM 474 + + +LQ+ P+A + L+ VK +G++F G PRS HA EA T Sbjct: 420 LAPQAASGSLQIVLPLAAAGVVFVLALSSFAMVKGFGLSFLGRPRSNFHAHEASLWERT- 478 Query: 475 IVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIAL----------VPGT 524 AM LA CV++ + + +M + + T+ S AL +PGT Sbjct: 479 --AMGCLALGCVVLGILPGMVTNGLMAVGRLLLRSDALTLQSPWALTPISAQRASYLPGT 536 Query: 525 FHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWE--NAMAPSGNG 582 F +T +++L LL +W R R RR AWACG+ + M S G Sbjct: 537 FLVGITLAVILTFLL----------VWWRFGR-PLRRV-PAWACGFAGSATSRMQDSPAG 584 Query: 583 VMQPLRVVFSALF--RLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRL 640 QP +F+ + RL+ + P R + H +PFW + PI L Sbjct: 585 FSQPWLRIFAPIHSGRLQTREIPEKRAPEWFVHF------QDPFWHGLYL-PIQKTALLL 637 Query: 641 AKEIQHLQSGDFRLYCLYVVAALVVLLIAI 670 +K+ LQ G +Y LY L+VLL I Sbjct: 638 SKQSLRLQQGKITIYLLYAFITLIVLLAVI 667 >UniRef50_Q2FKT7 NADH dehydrogenase (Quinone) n=1 Tax=Methanospirillum hungatei JF-1 RepID=Q2FKT7_METHJ Length = 643 Score = 278 bits (711), Expect = 5e-73, Method: Compositional matrix adjust. Identities = 189/604 (31%), Positives = 315/604 (52%), Gaps = 51/604 (8%) Query: 77 MDSLSAFMVLVISLLVVVCSLYSLTYMREYEG-KGAAAMGFFMNIFIASMVALLVMDNAF 135 +D LSA +++ LL + +LY+ Y+ G + + + +F+ SM+ +++ + Sbjct: 73 IDRLSALFCILLGLLSLAVALYTPGYLDRMHGNRRTYVVSGLIPLFLLSMLLVIMAETVI 132 Query: 136 WFIVLFEMMSLSSWFLVIAR-QDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDF 194 F+V +E+M++ S+FLV+ +++ + A + Y + +V + + LL+ +GS ++ Sbjct: 133 AFLVFWELMAILSFFLVLTEFEEEKTRYAALFYLAMTQISTVFVFLGILLIRLGTGSWEY 192 Query: 195 ASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIG 254 LS S L S FL FFG K+G++P H WLP AHPAAPS SALMSG+M+ Sbjct: 193 PV--HLSGSDPLISLSFLCLFFGIAIKSGVIPFHKWLPHAHPAAPSPVSALMSGMMISTA 250 Query: 255 IFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGI 314 ++ +++V A WG L++A G ++A+LGV+YAL EQD+K LLA+S+++N GI Sbjct: 251 LYALIRVVTGFYAPDAA---WGFLILAFGCLTAVLGVMYALKEQDLKGLLAYSSIDNTGI 307 Query: 315 ILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKM 374 IL+ +G+ ++ L ++ + GA+FH ++H LFKGLLFL AG++ T ++++M Sbjct: 308 ILIGIGLWVLFTVFGSQTLALMAIAGAVFHAISHGLFKGLLFLTAGSVCQAAGTRNIDEM 367 Query: 375 GALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLF-SLSRVEAVALQLAGPIAM 433 G + RMPWT IG L+I++IPP +GFI E+ SL LS + + LQ+ + + Sbjct: 368 GGILVRMPWTGGLFFIGVLSIASIPPFSGFIGEFLIIMSLIGGLSELSPL-LQIVMVVVL 426 Query: 434 VMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSAS 493 + ++TG L V FVK +G+TF PRS A++A+EVP M +LA + + + + Sbjct: 427 SLFSLTGALTVTTFVKAFGLTFLALPRSEGADKAREVPWPMYAGPAVLALMSAGLGIFSG 486 Query: 494 WLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCR 553 + + H P + + L T + L+ G W + Sbjct: 487 QVFSLLGH---------PGLLPDLLGLFLLLLGTSI-------------LVYGAVWSYA- 523 Query: 554 SRRAAFRRTGDAWACG-YGWENAMAPSGNGVMQPLRVVFSALFRLR--------QQLDPT 604 SR+ RT W CG G + M +G+G +P+ F ++R R Q Sbjct: 524 SRKTRITRT---WDCGMMGSSSRMEYTGSGFTEPVVRFFGPVYRTRICTTHEFLDQHQCL 580 Query: 605 LRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALV 664 R G H+ F++E + P R A + LQ+GD Y LYV ++ Sbjct: 581 FRSGTGSIHLMK-------FFEEYLYLPAARRIDRYASLVSSLQNGDIDRYVLYVFCTVL 633 Query: 665 VLLI 668 +L++ Sbjct: 634 ILIL 637 >UniRef50_C8XAR9 NADH/Ubiquinone/plastoquinone (Complex I) n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XAR9_NAKMY Length = 674 Score = 264 bits (675), Expect = 7e-69, Method: Compositional matrix adjust. Identities = 225/652 (34%), Positives = 337/652 (51%), Gaps = 23/652 (3%) Query: 33 KLSGITSLVGGVIGIISGITQLHAGVTLVARFAPP--FEFADLTLRMDSLSAFMVLVISL 90 L GI VGG+ +++GI + G T+ +A P L +D L + V Sbjct: 32 TLVGIGLAVGGLAALVAGIAAMQ-GQTVT--WAAPHLLPLFGLLFTVDPLGGVFLAVTGG 88 Query: 91 LVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWF 150 + LY + Y RE+ G A + + +F+ +M+ + + + ++++E+M+L+S Sbjct: 89 VSAAVGLYGIGYCREH-GLDARGVQAVLPLFVLAMMLVPLAASVGTLLLVWELMALTSLL 147 Query: 151 LVIA--RQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRTLS--LSPGL 206 LV+A R+ +AG Y + H G V I+I L+ + FA+ R + LSP + Sbjct: 148 LVVAEHRRRPEVASAGRWYAVMTHLGLVAILIGLLVFAAHAADGSFAALRAAAPGLSPAV 207 Query: 207 ASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLL 266 A VF+ GFG+KAG++PLH+WLPRAHP APS+ SALMS MV +GI+GI++V DLL Sbjct: 208 AGLVFVATGIGFGSKAGIVPLHAWLPRAHPEAPSNVSALMSAAMVNLGIYGIVRVGFDLL 267 Query: 267 A--QTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMV 324 A TG WW +LV+ +GA SA+ G+L A ++KRLL ST EN+G++L+ VG A Sbjct: 268 AGADTG---WWWLLVLGLGAGSAIYGILQAAVGTNLKRLLGNSTTENMGLVLIGVGAAGF 324 Query: 325 GLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWT 384 + +P L + L AL HL+NHA FK +LF AGA+++ D++ +G L RMP T Sbjct: 325 FGTTGNPPLAGLALAAALLHLVNHAAFKTVLFQAAGAVVAATGRRDLDDLGGLNTRMPAT 384 Query: 385 AAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAV 444 A IG LA SA+PP F+SEW Q+L VA + P+A+ +A+T GLAV Sbjct: 385 TTAFGIGALAASALPPGAAFVSEWLLLQALIHGLPAAGVAGAIVLPLAVAAVALTAGLAV 444 Query: 445 MCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAH 504 FVK +GI F PR+ AE A E P TM+ M L A CV +AL+ + + P + +A Sbjct: 445 ATFVKAFGIGFLAKPRTVEAERATERPATMLAGMGLAATACVALALAPTLVLPTLGAVAG 504 Query: 505 AFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLA--MPLLPGLYWLWCRSRRAAFRRT 562 A P G+ + ++P +L L LL + L G+ L R + A R Sbjct: 505 ATVGAPDPVQVQGLTIELVGVAGSLSPLMLTLALLLGMVVALAGVRALATRRQARAARL- 563 Query: 563 GDAWACGYGWENA-MAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLN-KGLAHVTARAQS 620 W CG G +A M + +PL+ VF + R +D T + L + Sbjct: 564 ---WDCGGGPLSARMEYTATSFAEPLQRVFDDVVRAEHDIDVTHHDEARYLVQQIEYRRR 620 Query: 621 TEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLIAIAV 672 + R+ +P++ A + + L +G Y A L LLI + V Sbjct: 621 VPDRIERRLYQPVLQAVAAWGRAGRRLSTGSVHRSLGYGFATLCGLLILLVV 672 >UniRef50_B2HHH3 Oxidoreductase n=6 Tax=Mycobacterium RepID=B2HHH3_MYCMM Length = 658 Score = 261 bits (668), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 206/644 (31%), Positives = 324/644 (50%), Gaps = 19/644 (2%) Query: 34 LSGITSLVGGVIGIISGITQLHAGVTLVARFAPPFEFADLTLRMDSLSAFMVLVISLLVV 93 LSG T+ G G G+T + GV A + + L F + + + V Sbjct: 25 LSGATTAGIGACGTALGLTAVF-GVVRQVHIAWLVPLIGVDFDIGRLGGFFIALTGAVAV 83 Query: 94 VCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVI 153 V +YS+ Y R E GA A+ + +F+ +M+ + + F++ +E+M++SS LV Sbjct: 84 VAGIYSIGYARR-EHLGAVAL-TMLPVFVTAMLLVPAAGSVSTFLLAWELMAISSLVLVA 141 Query: 154 ARQDKTSINAGMLYFFI-AHAGSVLIMIAFLLMGRESGSLDFASFRTLSLSPGLASAVFL 212 + + + Y+ + G +++ +++ +G+ FA S G+ + VF+ Sbjct: 142 TDHRRAQVRSAAGYYAVMTQLGFATLLLGLMVLAAAAGTDRFADMAVPS--EGVRTFVFV 199 Query: 213 LAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLP 272 GFG+KAG++PLH+WLPRAHP +PS SALMS MV +GI+G++++ + LL P Sbjct: 200 ATLLGFGSKAGLLPLHAWLPRAHPESPSPVSALMSAAMVNLGIYGLVRIDLQLLGPG--P 257 Query: 273 LWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPL 332 WWG+ ++ IGA SA+ GVL A D+KRLL +ST+EN+G++ L +G A + + Sbjct: 258 KWWGVTLLVIGAFSAMYGVLQASVATDLKRLLGYSTIENMGLVTLGLGAATLLSAAGAGP 317 Query: 333 LTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGC 392 V+ + AL HL+ HA FK L FL AG+++ D++ +G LA RM T I Sbjct: 318 AAVIAMTAALLHLIAHAAFKSLGFLAAGSVLVATQQRDLDMLGGLAHRMRCTTTFFGIAA 377 Query: 393 LAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYG 452 L S +P GF+SEW QSL + LA P+ + +A+T GL V VK +G Sbjct: 378 LGASGLPLGAGFVSEWLLVQSLIHARPEHNTIVGLATPLGVGAVALTTGLGVAAMVKAFG 437 Query: 453 ITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPA 512 F PRS AE A+E P TM+V M + A CV+IA++ + + + + + A Sbjct: 438 TGFLARPRSGSAERAREAPATMLVGMAVAALGCVVIAIAPAVVTGPLQSVLDTLPASRNA 497 Query: 513 TVAS-GIAL-VPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGY 570 + G L +PG ++P+LL L+A L+ + W SR T WACG Sbjct: 498 DLTDLGTVLRLPG-MDGSISPALLAAALVAALLVVLVLARWG-SRHRPEPVTSPLWACGA 555 Query: 571 GWENA-MAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTA---RAQSTEPFWD 626 A M + QPL+ VF + R ++ T L HV RA ++ D Sbjct: 556 DELTARMECTPTSFAQPLQRVFDDVLRPDTGIEVT-HLEATRYHVEQIAYRAHLSDAIED 614 Query: 627 ERVIRPIVSATQRLAKEIQHLQSGDFRLYCLY-VVAALVVLLIA 669 R+ P++ A A+ I+ +G LY Y + L+VL++A Sbjct: 615 -RIYAPVLRALAWCAQVIRRAHNGSVHLYLGYGALGVLIVLVVA 657 >UniRef50_B5EKJ3 NADH dehydrogenase (Quinone) n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5EKJ3_ACIF5 Length = 660 Score = 260 bits (665), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 213/599 (35%), Positives = 324/599 (54%), Gaps = 23/599 (3%) Query: 74 TLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDN 133 + ++D LS F ++++ LL +L++ Y R G + + F+ M +L+ N Sbjct: 76 SFQIDPLSGFFLILLGLLAFAVTLFATGYFRALSGPALRRLMLQYHTFLLGMGLVLLAAN 135 Query: 134 AFWFIVLFEMMSLSSWFLVIARQDKT-SINAGMLYFFIAHAGSVLIMIAFLLMGRESGSL 192 AF F+V +E+M+L+S+FLV+ ++ S +AG LY IAH G++ I++ F+L+ + + Sbjct: 136 AFTFLVAWEIMALASYFLVVTEHEEPGSRHAGFLYLLIAHLGALAILLGFVLLAGAAIAQ 195 Query: 193 D--FASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVM 250 F++ L P ASA FLL FFGF AKAG++PLH WLP AHPAAP+ SALMSG M Sbjct: 196 GGPFSAMLHAPLDPFWASAAFLLTFFGFSAKAGLLPLHIWLPDAHPAAPAPVSALMSGAM 255 Query: 251 VKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVE 310 +++ +G+L+V D L L WWG V+ +G +AL GVL+A A+ D+KRLLA+S++E Sbjct: 256 LQMAFYGMLRV--DFLFLGNLASWWGPFVLGVGLATALFGVLFAAAQTDMKRLLAYSSIE 313 Query: 311 NVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHD 370 N+G+I++A G+A++ + L + L AL+H LNHA FKGLLFLG+G+++ + Sbjct: 314 NMGLIMVAFGLALIFRTHGLGALAALALAAALYHALNHAFFKGLLFLGSGSVLHGAGSVA 373 Query: 371 MEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGP 430 M+++G L ++MP TA L+G LAI+ +PPLNGF+SEW Q+ + L P Sbjct: 374 MDRLGGLIRQMPQTAFFMLLGTLAIAGLPPLNGFVSEWLLLQAFLLSPALPQSTLSAVLP 433 Query: 431 IAMVMLAVTGGLAVMCFVKMYGITFCGAPRST-HAEEAQEVPNTMIVAMLLLAALCVLIA 489 +A + + LA VK YGI F G R HA E + AM LL+ C+ + Sbjct: 434 LAASGVVLAVALAAYAMVKFYGIAFLGQARGAGHAHEGGRWERS---AMALLSVACIFLG 490 Query: 490 LSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYW 549 L L ++H TV G+ L P + ++ L +A L G Sbjct: 491 LFPGVLL-NLLHPVLQEMLGQSFTVQRGLWLTPVSAQRASYSPIIFFLGMATALGLGFLL 549 Query: 550 LWCRSRRAAFRRTGDAWACGYGWEN-AMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLN 608 +W R RR AWACG+ AM S G QPL +F+ L++ +++D R Sbjct: 550 IWSFFGR-PLRRV-PAWACGFPVRTPAMQDSSLGFAQPLLRIFAPLYQAEREVDGAGRW- 606 Query: 609 KGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLL 667 R + EP + +P+ L+ ++ LQ G LY LY L++LL Sbjct: 607 --------RMRIGEPLY-RGFYQPLSLLAFWLSAQVLRLQQGRITLYLLYSFLTLLILL 656 >UniRef50_C5A2R1 Formate hydrogenlyase II subunit D (Mhy2D) n=1 Tax=Thermococcus gammatolerans EJ3 RepID=C5A2R1_THEGJ Length = 694 Score = 257 bits (656), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 184/523 (35%), Positives = 284/523 (54%), Gaps = 34/523 (6%) Query: 1 MDALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTL 60 M +L T ++ILYL + LA L L R +I VG V ++ ++ L V++ Sbjct: 1 MKMKELFTLTVILYLISILAVLPLRKNYRASIT-------VGHVFTGLASLSLLAFTVSV 53 Query: 61 VAR--------FAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYE--GKG 110 + F A + +D LS + LV+ L + S+YS YM YE G+G Sbjct: 54 LPEALKGKAIEFTYDLGVAKIPFHVDGLSLILCLVLGSLGLATSIYSPKYMEFYERFGRG 113 Query: 111 AAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSI-NAGMLYFF 169 + + + F+ SMV ++ N WF+ +E+M+ +S+ L++ D+ + AG YF Sbjct: 114 WLYVVLY-STFVLSMVLIVTTSNFLWFVFFWEVMTFTSYLLMVWENDEEYVRKAGWKYFV 172 Query: 170 IAHAGSVL-IMIAFLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLH 228 H S L +++A L+ ++GS++ +F LS L +LL GFG+KAG++PLH Sbjct: 173 TMHVASTLPLIVALALLYAKAGSIEGLNFDNLS-KLHLGPIYYLLFLVGFGSKAGVVPLH 231 Query: 229 SWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISAL 288 WLP AHPAAPS+ SAL+SG M+K+ ++G+++ +L GL +G +V +G ++ Sbjct: 232 FWLPDAHPAAPSNVSALLSGAMIKVAVYGLIRTTCFIL---GLNETFGYIVAILGTVTLT 288 Query: 289 LGVLYALAEQDIKRLLAWSTVENVGIILLAVG--VAMVGLSLHDPLLTVVGLLGALFHLL 346 +G LYAL + D KRLLA+ +V +G I L VG +A++ + + L+HL+ Sbjct: 289 VGTLYALKQTDAKRLLAYHSVGQMGYIWLGVGAGIALMAKGGSYAAFGAIAMAAGLYHLV 348 Query: 347 NHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFIS 406 NHA+FKGLLFL AG+++ R HT ++ +G LAK MP TA I ++I+ PP NGF+S Sbjct: 349 NHAIFKGLLFLSAGSVLYRTHTRELNVLGGLAKLMPLTALFTFIAAMSIAGEPPFNGFMS 408 Query: 407 EWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEE 466 +W +Q F LS L G +A+ + A T + FVK Y F G P E Sbjct: 409 KWMIYQGTF-LSG--DGLLVFCGVMALFISAAT----LASFVKFYTTAFGGVPTKV-TEN 460 Query: 467 AQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNT 509 A+EVP++M+V LAALC+L L S + P ++ T T Sbjct: 461 AEEVPSSMLVGKGFLAALCLLFGLIPSSIIPLLLAPGKVLTGT 503 >UniRef50_B8IYV9 NADH dehydrogenase (Quinone) n=3 Tax=Desulfovibrio RepID=B8IYV9_DESDA Length = 682 Score = 249 bits (636), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 215/614 (35%), Positives = 330/614 (53%), Gaps = 31/614 (5%) Query: 74 TLRMDSLSAFMVLVISLLVVVCSL---YSLTYMREYEGKGAAAMGFFMNIFIASMVALLV 130 TL +D LS +L + L +VC+L +L + R E AA FF + I + ++ Sbjct: 76 TLGLDPLSRIFLLPVFGLGLVCALSGGMALRHTRPQE-HNLAAHWFFYILLILGLALVMA 134 Query: 131 MDNAFWFIVLFEMMSLSSWFLV-IARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRES 189 +A F++ +E+MSL+ +FL+ D+ +A +Y AH G+V +M F+L+ + + Sbjct: 135 ARDAVLFMLAWELMSLAPFFLIEFNDGDRQVRDASWVYLVAAHLGAVALMAFFVLLWQST 194 Query: 190 GSLDFASFRTLSLSPGLA--------SAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSH 241 G+ + ++ G+A +A+F LA GFGAKAG++P+H WLP AHPAAPSH Sbjct: 195 GTTSLDILQGGAVMQGVARDAGSGVLTALFALAVLGFGAKAGLVPMHVWLPEAHPAAPSH 254 Query: 242 ASALMSGVMVKIGIFGILKVAMDLLAQTG-LPLWWGILVMAIGAISALLGVLYALAEQDI 300 SAL+SG M+ G++GI++ ++ LLA G P WWG ++ +G + L+G+L AL + ++ Sbjct: 255 VSALLSGAMINAGLYGIIR-SLSLLAAPGAAPEWWGWTLLLLGLATGLIGILKALGQSNL 313 Query: 301 KRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAG 360 KRLLA+S+VEN+G++L+ VG ++GL+ + + +G G+L H+LNHA FKGLLFL AG Sbjct: 314 KRLLAYSSVENMGLMLMGVGAGLIGLACGNAWIATLGFAGSLMHMLNHAGFKGLLFLSAG 373 Query: 361 AIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRV 420 ++ T ME++G L KR+P AA +G AI+ +PPLNGF E SL + Sbjct: 374 EVLHATGTVRMEQLGGLQKRLPLLGAAFALGAAAIACLPPLNGFAGELVLALSLLDGPSL 433 Query: 421 EAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLL 480 V Q+ +A+V LA+ GLA + K YGITF G PRS A A+ + + L Sbjct: 434 PGVERQVGLLLALVTLALISGLAAALYAKAYGITFLGEPRSGFAANARPAGWRTLWPLAL 493 Query: 481 LAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLL- 539 AA+CVL L+A A P A +A Q+ SL ++ L+ Sbjct: 494 PAAVCVLGGLAAPLFFDLASMTGLAALPMPNDMQAGALA-----GQEQMRASLAMVSLVG 548 Query: 540 AMPLLPGLYWLWCRSRRAAFRRTGD--AWACGY-GWENAMAPSGNGVMQPLRVVFSA--L 594 ++ L L + R R R G W CGY G + + G +PL +F+ Sbjct: 549 SIALGLALAGIVLRKRLLKRRSVGSMPTWGCGYQGGTARIQYTDAGFSEPLGKIFAPGMG 608 Query: 595 FRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRL 654 ++R QLD L +KG V+A + +D P+ +RL + +Q G L Sbjct: 609 LKVRMQLDSRLFPDKGEMSVSAPDRLRRSIYD-----PLFEGIERLCNACKIMQHGKIHL 663 Query: 655 YCLYVVAALVVLLI 668 Y LY++A +V LL+ Sbjct: 664 YILYILATVVGLLV 677 >UniRef50_C6HXN7 NADH/Ubiquinone/plastoquinone (Complex I) (Fragment) n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HXN7_9BACT Length = 387 Score = 244 bits (623), Expect = 8e-63, Method: Compositional matrix adjust. Identities = 140/339 (41%), Positives = 213/339 (62%), Gaps = 11/339 (3%) Query: 76 RMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAF 135 +M L A+ +LV+ ++ + + Y + Y + + GF++ F+ +M A+++ + Sbjct: 56 QMTPLRAWFLLVVGIVSTMAAWYRVGYQQHNQ----VFTGFWLPWFVLAMAAVILSQTVW 111 Query: 136 WFIVLFEMMSLSSWFLVIARQDKTS-INAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDF 194 F+ +E+M+ +S+ LV++ ++ I AG +Y ++ ++ I+ LLM S++F Sbjct: 112 VFMTAWEVMAATSFLLVVSHHEEPGVIKAGYIYLVMSQISAMAILAGLLLMAASLHSMNF 171 Query: 195 A--SFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVK 252 A + + L S VF L GF K G++P H WLPRAHP AP+ S+LMSG M+K Sbjct: 172 ALWAAKARFLPWETKSGVFALLTLGFAIKCGIIPFHVWLPRAHPVAPAPVSSLMSGAMIK 231 Query: 253 IGIFGILK-VAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVEN 311 +G+FGI++ + MDL A L W I+++ +GA+S+LLGVLYAL E D+KRLLA+ ++EN Sbjct: 232 LGVFGIVQFLLMDLGATA---LLWPIVLLVLGAVSSLLGVLYALMEHDLKRLLAYHSIEN 288 Query: 312 VGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDM 371 +GII L +GV VG+ LH P + VVGL+ +LFH LNHALFK LFL AGA+ T D Sbjct: 289 IGIIFLGLGVMGVGIDLHHPQIAVVGLVASLFHTLNHALFKSQLFLAAGAVEQHTGTLDA 348 Query: 372 EKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYT 410 E +G L + +P A L+G +AISA+PP NGF+SEW T Sbjct: 349 EHLGGLIRTIPGVALGFLLGSMAISALPPFNGFVSEWLT 387 >UniRef50_Q2RXM5 NADH dehydrogenase (Quinone) n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RXM5_RHORT Length = 674 Score = 243 bits (620), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 190/612 (31%), Positives = 303/612 (49%), Gaps = 42/612 (6%) Query: 71 ADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLV 130 + L +D LSA V++IS+L +LYS+ Y+ Y + A +FIA M+ + Sbjct: 73 SSLAFTIDGLSAIFVILISVLGTASALYSVGYIAHYPDEDARRYYVPFPLFIAGMLMVAT 132 Query: 131 MDNAFWFIVLFEMMSLSSWFLV-IARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRES 189 + F F +E M+L S+FLV +DK +++AG +YFF+ S+ +M+A +++G Sbjct: 133 TSDWFCFFFGWEFMTLVSYFLVTFENRDKENLSAGFIYFFMTQLTSMGLMLAIIVLGTWG 192 Query: 190 GSLDFASF-RTL----SLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASA 244 GS FA+ +TL + +P + L F GF KAGM PL WLP+AHPAAP+ SA Sbjct: 193 GSTSFAAVAKTLGALQAENPVALYGLLSLFFIGFATKAGMFPLGIWLPKAHPAAPASVSA 252 Query: 245 LMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLL 304 L+SGVM+K+GI+G+L++ + L WG+++ G +S L+G L AL E D KRLL Sbjct: 253 LLSGVMIKLGIYGMLRIFLWALPLGEATHVWGMVITLFGVLSMLVGTLRALGEHDCKRLL 312 Query: 305 AWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIIS 364 A ++ +G +LL +G+ + +PL +G LG L+HL+NHA FK LLF G+I+ Sbjct: 313 AQHSIGQMGYVLLGLGLGLT-FLGSNPLFAALGFLGCLYHLINHACFKSLLFFNTGSILY 371 Query: 365 RLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVA 424 R T D++ +G L+ MP TA L+G L+I+ PP NGF+S+W +QS V Sbjct: 372 RAGTRDLDSLGGLSAVMPLTAGCALVGALSIAGTPPFNGFVSKWLLYQSAI-FGDVSTPV 430 Query: 425 LQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAAL 484 LA +A+ + VT + FVK G + G P +M + LA + Sbjct: 431 YILAAVVAIFIGTVT----LASFVKYMGTAYLGTLPKRFVGSGFGCPRSMEAVEVFLAVV 486 Query: 485 CVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHT------QVTPSLLLLLL 538 C+++ + + ++ + PA +G+ L P VT + L Sbjct: 487 CLVMGVFPGPVVATLLGVLD------PAFAGAGVDLGPSVLSALPWSGLSVTSASGTTLT 540 Query: 539 LAMPL--LPGLYWLWCRSR--RAAFR---RTGDAWACGYGWENAMAP-SGNGVMQPLRVV 590 + PL + GL + S A + R W CG ++ + + P + + Sbjct: 541 VFAPLVVIGGLAVSFALSALIHGAVKVPSRPAQIWNCGEEIDDELVRYRASSFYSPFKKL 600 Query: 591 FSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSG 650 + ++ RQ PTL L L + D+ + PI + ++ +K I +G Sbjct: 601 IAPVY--RQHPFPTLSLPALLPRLLDL--------DKWLYFPIGALFRKSSKAISRAHTG 650 Query: 651 DFRLYCLYVVAA 662 +LY + VA Sbjct: 651 VPQLYLSWQVAG 662 >UniRef50_Q10880 Uncharacterized protein Rv0083/MT0090 n=15 Tax=Mycobacterium RepID=Y051_MYCTU Length = 640 Score = 236 bits (602), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 187/606 (30%), Positives = 313/606 (51%), Gaps = 24/606 (3%) Query: 75 LRMDSLSAFMVLVISLLVVVCSLYSLTYMR-EYEGKGAAAMGFFMNIFIASMVALLVMDN 133 + +D L F + + + Y + Y+R E+ G+ A+ + +F+A+M+ + + Sbjct: 47 IELDRLGGFFMALTGAVAAPVGCYLIGYVRREHLGRVPMAV---VPLFVAAMLLVPAAGS 103 Query: 134 AFWFIVLFEMMSLSSWFLVIARQDKTSI-NAGMLYFFIAHAGSVLIMIAFLLMGRESGSL 192 F++ +E+M+++S LV++ + + +AG+ Y + G + I++ +++ GS Sbjct: 104 VTTFLLAWELMAIASLILVLSEHARPQVRSAGLWYAVMTQLGFIAILVGLVVLAAAGGSD 163 Query: 193 DFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVK 252 FA ++ G+ +AVF+L GFG+KAG++PLH+WLPRAHP APS SALMS MV Sbjct: 164 RFAGLG--AVCDGVRAAVFMLTLVGFGSKAGLVPLHAWLPRAHPEAPSPVSALMSAAMVN 221 Query: 253 IGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENV 312 +GI+GI++ + LL P WWG+ ++A+G SAL GVL A D+KRLLA+ST EN+ Sbjct: 222 LGIYGIVRFDLQLLGPG--PRWWGLALLAVGGTSALYGVLQASVAADLKRLLAYSTTENM 279 Query: 313 GIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDME 372 G+I LA+G A + + A+ H++ HA FK L F+ AG++++ D++ Sbjct: 280 GLITLALGAATLFADTGAYGPASIAAAAAMLHMIAHAAFKSLAFMAAGSVLAATGLRDLD 339 Query: 373 KMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIA 432 +G LA+RMP T + L +P GF+SEW QSL + + L P+A Sbjct: 340 LLGGLARRMPATTVFFGVAALGACGLPLGAGFVSEWLLVQSLIHAAPGHDPIVALTTPLA 399 Query: 433 MVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSA 492 + ++A+ GL+V K +GI F PRST AE A+E P +M M + A C+++A++ Sbjct: 400 VGVVALATGLSVAAMTKAFGIGFLARPRSTQAEAAREAPASMRAGMAIAAGACLVLAVAP 459 Query: 493 SWLAPKIMHIAHAFTNTPPA--TVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWL 550 +AP + A T + +P + P ++ +LA L + Sbjct: 460 LLVAPMVRRAAATLPAAQAVKFTGLGAVVRLP-AMSGSIAPGVIAAAVLAAALAVAVLAR 518 Query: 551 WCRSRRAAFRRTGDAWACGYG-WENAMAPSGNGVMQPLRVVFSALFRLRQQLDPT----- 604 W RR A R WACG M + +PL+ VF + R ++ T Sbjct: 519 WRFRRRPAPARL-PLWACGAADLTVRMQYTATSFAEPLQRVFGDVLRPDTDIEVTHTAES 577 Query: 605 LRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLY-VVAAL 663 + + + + TA A + E +R+ P+V A +A+ ++ +G Y Y + L Sbjct: 578 RYMAERITYRTAVADAIE----QRLYTPVVGAVAAMAELLRRAHTGSVHRYLAYGALGVL 633 Query: 664 VVLLIA 669 +VL++A Sbjct: 634 IVLVVA 639 >UniRef50_B6YTW6 Hydrogenase 4, component B or formate hydrogen lyase, subunit 3 n=1 Tax=Thermococcus onnurineus NA1 RepID=B6YTW6_THEON Length = 690 Score = 236 bits (602), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 154/435 (35%), Positives = 242/435 (55%), Gaps = 23/435 (5%) Query: 71 ADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGF-FMNIFIASMVALL 129 A + ++D LS M + L + S+YS YM YE G M ++F+ SM+ ++ Sbjct: 70 AQIPFQIDGLSLIMCFIFGALGLAASIYSPRYMAIYEKSGRGWMYITIYSVFMLSMILIV 129 Query: 130 VMDNAFWFIVLFEMMSLSSWFLVIARQDKTSI-NAGMLYFFIAHAGSVLIMIAFLLMGRE 188 + N FWFI L+E+M+ +S+ L I DK + AG YF H S L +I L + Sbjct: 130 TIANMFWFIFLWEVMTFTSYLLTIWESDKEDVRKAGWKYFVTMHIVSTLPLIIALALLYA 189 Query: 189 SGS----LDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASA 244 S L+F S L LSP + A+FL+ GFG+K+G++PLH W P A+ APS+ SA Sbjct: 190 DVSSIEGLNFESLAALKLSP-VFYALFLI---GFGSKSGVVPLHFWAPEAYTVAPSNVSA 245 Query: 245 LMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLL 304 LM+G + K+ ++ +++ ++ +G V +G ++ +G LYAL + D KRLL Sbjct: 246 LMAGALEKVAVYALIRTTCFIMKPNET---FGYAVALLGTVTLTVGTLYALKQTDAKRLL 302 Query: 305 AWSTVENVGIILLAVGVAMVGLSLHD--PLLTVVGLLGALFHLLNHALFKGLLFLGAGAI 362 A+ ++ +G I L +GV +V ++ D + L +L+HL+NH FKGLLFL G+I Sbjct: 303 AYHSIGQIGYIWLGMGVGIVFIARGDMYSAFGAIALASSLYHLVNHTFFKGLLFLSTGSI 362 Query: 363 ISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEA 422 R + D+ ++ LAK MP+TA I ++I+ PP NGF+S+W +QS F LS Sbjct: 363 FYRTRSRDLNQLRGLAKLMPFTALFTFIAAMSIAGTPPFNGFMSKWMIYQSTF-LSGNGL 421 Query: 423 VALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLA 482 + G +A+ + A T + F+K Y F G P + ++A+EVP+ M++A LA Sbjct: 422 IV--FFGVMALFISAAT----LASFIKFYTTAFGGEP-TEFTKDAEEVPSPMLIAKGFLA 474 Query: 483 ALCVLIALSASWLAP 497 +LC+L+ L S + P Sbjct: 475 SLCILLGLVPSLILP 489 >UniRef50_A1SQ81 NADH dehydrogenase (Quinone) n=2 Tax=Actinomycetales RepID=A1SQ81_NOCSJ Length = 664 Score = 231 bits (590), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 196/543 (36%), Positives = 288/543 (53%), Gaps = 14/543 (2%) Query: 121 FIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIAR-QDKTSINAGML-YFFIAHAGSVLI 178 F+ SM + +A F++++E+M+L+S LV+ +D+ + + L Y + H L+ Sbjct: 117 FLVSMQLVPAAADAVSFLLMWELMALASAVLVLTEHRDREEVRSAALWYAAMTHLSFGLL 176 Query: 179 MIAFLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAA 238 ++ F ++ E G F + + + AS F+L GF KAG +P H WLPRAHPAA Sbjct: 177 LLGFTVLVEEGGGTGFDAMSAVDPTSLQASIAFVLLIAGFATKAGAVPFHVWLPRAHPAA 236 Query: 239 PSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQ 298 PSH SA+MS MVK+G++G L VA+ LL G P WWG +V+A+GA+SA G+L A Sbjct: 237 PSHVSAVMSAAMVKMGVYGALLVALRLL--PGGPTWWGFVVVALGAVSATYGILQASVTS 294 Query: 299 DIKRLLAWSTVENVGIILLAVGVAMVGLSLHD-PLLTVVGLLGALFHLLNHALFKGLLFL 357 D+KRLLA+ST ENVG++ LA+G AM+ L HD L+ L L +HA FK LFL Sbjct: 295 DLKRLLAYSTTENVGLMFLALGTAML-LRSHDVSAPADAALVACLLLLTSHAAFKTALFL 353 Query: 358 GAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSL 417 GAGA++ D+++MG LA RMP T A +G L +A+P GF++EW QSL Sbjct: 354 GAGAVLHATGERDLDRMGGLAARMPVTNVAFALGALGAAALPLSVGFVAEWTLLQSLIHG 413 Query: 418 SRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVA 477 +R + + PI++ ++A+T GLA++ FVK YGI F PRS+ A EA+E M A Sbjct: 414 ARPDDRLVAAMMPISVAVVALTAGLALLTFVKAYGIAFLARPRSSGAAEAREATPGMRTA 473 Query: 478 MLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLL 537 ML+ A V + L LA A P + VA + + G V S +L + Sbjct: 474 MLVAAVAVVGLGLVPGPLADLAGRAAG--VADPGSEVAVDLPGIAGGVLDPVAVS-VLAV 530 Query: 538 LLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENA-MAPSGNGVMQPLRVVFSALFR 596 LLA P+ G+ L +RR RR AW CG + M + +PL VF R Sbjct: 531 LLAAPV--GVVAL-AAARRRRRRRVDLAWGCGGARVSPRMQYTATSYAEPLARVFDDAVR 587 Query: 597 LRQQLDPT-LRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLY 655 + + T ++ L Q + + R+ +P++ R+ + LQ+G Y Sbjct: 588 PERDVVVTHYSESRYLVERVQFRQRLDEVVETRLYQPVLRVGDRVGAAARRLQNGSIHRY 647 Query: 656 CLY 658 Y Sbjct: 648 LGY 650 >UniRef50_Q9UYN2 Hydrogenase 4, component B or formate hydrogen lyase, subunit 3 n=1 Tax=Pyrococcus abyssi RepID=Q9UYN2_PYRAB Length = 647 Score = 228 bits (581), Expect = 6e-58, Method: Compositional matrix adjust. Identities = 150/435 (34%), Positives = 242/435 (55%), Gaps = 33/435 (7%) Query: 73 LTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKG-AAAMGFFMNIFIASMVALLVM 131 L + +D S +L++ +L SLYS+ YM + GK A+ + N F+ SM +L+ Sbjct: 57 LPVYIDGFSLIFMLILGILGFSASLYSIPYMERHPGKEWVYAVAY--NAFLLSMFLILIT 114 Query: 132 DNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRES-- 189 N WF+ +E+M+LSS+ L+ D+ + G+ Y+ H + + F+ +G Sbjct: 115 SNLVWFVFFWELMTLSSFILI--TWDEKDFDPGIKYYIAMHILTTFPL--FISLGVSYSF 170 Query: 190 -GSLDFASFRTLSLSPGLAS----AVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASA 244 GSLD ++ L P A+ A FL+AF AK+G++P H W+P + APS+ S+ Sbjct: 171 LGSLDAMTYPNLKSLPSSATLLLYASFLIAFM---AKSGIVPFHFWVPSTYKVAPSNISS 227 Query: 245 LMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLL 304 L++G M KI +FG++++ L P G LV +GA++ +G LYAL E D K+LL Sbjct: 228 LLAGAMEKIAVFGLIRIMYTALPT---PKSIGYLVALLGAVTLTVGTLYALRESDAKKLL 284 Query: 305 AWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIIS 364 A+ ++ +G I L +G+ GLSL PL +G+ +FH LNH+LFKG LFL AG++ Sbjct: 285 AYHSIGQMGYIWLGIGI---GLSLDSPL-GALGMFAGIFHALNHSLFKGSLFLSAGSVEY 340 Query: 365 RLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVA 424 +++ +G LA+RM WT A L+ LAIS +PP NGF+S+W + + ++ + Sbjct: 341 ATGETNLDNLGGLAERMKWTGLATLLASLAISGVPPFNGFLSKWLIYTAGYNSGD---MV 397 Query: 425 LQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAAL 484 L +A+ + AVT + F+K Y F G S + EVP +M+V L+L++L Sbjct: 398 LSFGAVLAVFISAVT----LASFIKFYTSQFGG--ESERYRDVSEVPLSMVVPQLILSSL 451 Query: 485 CVLIALSASWLAPKI 499 C++I + + + P I Sbjct: 452 CLIIGIFPALVVPLI 466 >UniRef50_B5YKQ9 Hydrogenase 4, component B or formate hydrogen lyase, subunit 3, putative n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YKQ9_THEYD Length = 686 Score = 226 bits (577), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 141/433 (32%), Positives = 240/433 (55%), Gaps = 20/433 (4%) Query: 71 ADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAM-GFFMNIFIASMVALL 129 + T+ +DSLSA +L+ISL+ SL+S Y+ Y+ F + +FIAS+ + Sbjct: 69 SSFTISIDSLSALFLLIISLVSFCVSLFSWKYLDVYKTNSPKRFYPFLILLFIASIGVVS 128 Query: 130 VMDNAFWFIVLFEMMSLSSWFLVI-ARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRE 188 V D F FIV +E+M+LSSWFLVI R+ K+++ G+ YF H + +++A +++ Sbjct: 129 VKDFLF-FIVFWELMTLSSWFLVIFEREKKSALKGGLQYFIATHVTTAFLILASVILYSY 187 Query: 189 SGSLDFASF-RTLSL----SPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHAS 243 S F ++ SL P L+ + F F KAG++P WLP +P PS AS Sbjct: 188 SNDFSFKEINKSFSLIIKNQPYLSHFILFCIFIAFVTKAGVLPFGFWLPNTYPQPPSSAS 247 Query: 244 ALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRL 303 + GVM K+ ++ + + ++ + WG ++ + G S +G + AL + + KRL Sbjct: 248 SFFGGVMSKLAVYALFRFFCSVIPFSFHTQIWGFIIASFGVFSIFVGTIAALTQDEAKRL 307 Query: 304 LAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAII 363 +++ + VG + L +GV + + + +P L + L+G LFH+ N++++K LLFL AG+I Sbjct: 308 MSFHAIGQVGYMFLGIGVGLYFIRI-NPFLASIALVGGLFHVFNNSIYKSLLFLNAGSIF 366 Query: 364 SRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQ-SLFSLSRVEA 422 + T D+ K+ L K MP TA LIG L+I+ +PP NGFIS+ ++ S++S + E Sbjct: 367 YKTGTTDLNKVSGLMKVMPLTAITALIGSLSIAGVPPFNGFISKLLIFESSIWSAKQSEV 426 Query: 423 V-----ALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVA 477 A + G I++ + AVT + F+K F G + T +E + +P +M+++ Sbjct: 427 FFLIRGAFIVFGIISVFISAVT----LASFLKFVNSAFMGKLQGT-IDEKRNLPWSMVLS 481 Query: 478 MLLLAALCVLIAL 490 ++LA +C+L L Sbjct: 482 QIILAFICLLAGL 494 >UniRef50_C6HVM9 Putative formate hydrogenlyase subunit 3 (HyfB) n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HVM9_9BACT Length = 682 Score = 224 bits (572), Expect = 6e-57, Method: Compositional matrix adjust. Identities = 232/675 (34%), Positives = 340/675 (50%), Gaps = 57/675 (8%) Query: 18 SLASLF--LLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAPPFEFADLT- 74 SLAS F LL L+ LAI LSG+ LV T R P L+ Sbjct: 34 SLASFFFTLLSLESLAIALSGLLPLV----------------TTSDTRLILPGGIPGLSF 77 Query: 75 -LRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDN 133 LR+D LS F +L++ LYS Y + + A +F+ + + + Sbjct: 78 HLRLDPLSGFFLLLLGGASAGVLLYSAGYTKNEAPEKKAQFLAKTTVFLFFTGGVFLAAD 137 Query: 134 AFWFIVLFEMMSLSSWFLVIARQDKTSIN-AGMLYFFIAHAGSVLIMIAF-LLMGRE--S 189 + F++ +E+M+++S+FL+++ ++ + A L +AH GS+LI+ AF LL RE S Sbjct: 138 VYSFMLFWEIMAVASFFLILSGENTEGVRRASYLTLLLAHGGSMLIVTAFALLATRELPS 197 Query: 190 GSLDFASF-----RTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASA 244 GSL ASF + LS G A V LL GFGAKAG++PLH WLP AHPAAP+ ASA Sbjct: 198 GSLTMASFSFEALKMNHLSSGEALLVSLLFLLGFGAKAGVVPLHVWLPLAHPAAPAPASA 257 Query: 245 LMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLL 304 L+SGVM+K I+G+++ DL+ L +GIL++ GA AL G+L+A+ + D K LL Sbjct: 258 LLSGVMLKAAIYGLIRALFDLVGLPQLAPSFGILLLVTGAFMALFGILHAILQSDTKTLL 317 Query: 305 AWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIIS 364 A+S++EN+G+ILL G+ ++ L PL + L AL+H LNHA FK LLFLGAG +I Sbjct: 318 AYSSIENIGLILLGTGLGILYLKTGHPLAGTLALCAALYHALNHAFFKALLFLGAGTMIH 377 Query: 365 RLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVA 424 ++ +MG L K+MP + A LI L+IS IPP NGF+SEW QS + Sbjct: 378 ATGETNLNRMGGLFKKMPVSGALVLIAVLSISGIPPTNGFVSEWLLLQSTLQARDLLGTI 437 Query: 425 LQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAAL 484 + A +L + LA M F+K +G+ + G PRS A A E + M LA Sbjct: 438 QRSAVLFGAAILVLASALAAMGFLKFFGVGYLGQPRSDGARAAHECSLFERLGMGGLAMG 497 Query: 485 CVLIALSASWLAPKIMHIAHAFTNT--PPATVASGIA-LVPGTFHTQVTPSLLLLLLLAM 541 + + L S + +I+ T+T P + A G A L+P PS L LL + Sbjct: 498 SLFLGLFPSLVLGEILKAVSPLTSTTLPSPSGAYGWAWLLP---LPPAGPSTSPLFLLLL 554 Query: 542 PLLPGLYWLW-CRSRRAAFRRTGDAWACGY--GWENAMAPSGNGVMQPLRVVFSALFRLR 598 ++ L LW RR W CGY + + A + QP+R F F ++ Sbjct: 555 LVILTLPVLWLVLGTEGKKRRLSIPWGCGYRDSYRRSQA-TAESFAQPIRHFFPVFFSMK 613 Query: 599 QQL------DPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDF 652 + L DP L+ +P W + RP+ +A+ + ++SG Sbjct: 614 RHLPSPDDPDPVFLLS-----------VEDPHW-PLLYRPLFRLFVAIAEGAERVRSGRI 661 Query: 653 RLYCLYVVAALVVLL 667 +Y +Y L++LL Sbjct: 662 SIYLIYSFTTLILLL 676 >UniRef50_B6YWP6 Hydrogenase 4, subunit 3 n=3 Tax=Thermococcus RepID=B6YWP6_THEON Length = 634 Score = 219 bits (557), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 169/511 (33%), Positives = 268/511 (52%), Gaps = 33/511 (6%) Query: 27 LDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAPPF--EFADLTLRMDSLSAFM 84 L +L LS + SL GI+ + +TL+ + F+ LTL++D LS F Sbjct: 27 LTKLVNALSALGSLTIAYAGIVGLKESVELNITLLHLKSDSIINAFSTLTLKVDPLSGFF 86 Query: 85 VLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMM 144 ++++ +L S+Y + Y+ Y+G F +F+ M +LV N WF+V +E+M Sbjct: 87 MIILGILGFCTSVYGIAYLDMYKGD-KRLYAFNYPLFLLFMFLVLVSWNLLWFVVFWELM 145 Query: 145 SLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLM---GRESGSLDFAS----- 196 +L S FLV +++ ++ A + YF + A + ++IA +L+ G D S Sbjct: 146 TLFSQFLVAFERNEKTLIATLKYFCMTKAAADFMLIAIVLVLITISGGGDYDILSSQLVN 205 Query: 197 -FRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGI 255 FR+ L L SA F++ G G KA ++P H WLP A+ APS+ S+L+SG M K+ + Sbjct: 206 YFRSHPLEMYLVSAGFMI---GLGVKAALVPFHVWLPDAYVEAPSNVSSLLSGAMEKMPV 262 Query: 256 FGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGII 315 + + + L+ T L G+L+ G ++ G +YAL + D KRLLA+ +V +G + Sbjct: 263 YMMFRF---FLSFTPLTPNIGLLIALFGTLTLFFGTMYALKQTDSKRLLAYHSVGQIGYV 319 Query: 316 LLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMG 375 + A+G + LS + L+ +LFH LNHA FKGLLFL AG+I+ R + D++ +G Sbjct: 320 VFALGAGIYLLSKGYTTFGALALMASLFHALNHAFFKGLLFLTAGSILYRTGSRDLDHLG 379 Query: 376 ALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVM 435 LA+ MP TA A LIG L+I+ +PP NGF+S+W + S + + L G +A+ + Sbjct: 380 GLARFMPITAFAALIGSLSIAGMPPFNGFVSKWMIYVSTLPTPTL----VSLFGALALFI 435 Query: 436 LAVTGGLAVMCFVKMYGITFCGAPRSTHAEE--AQEVPNTMIVAMLLLAALCVLIALSAS 493 AVT FVK + F P A+E +EVP +M + L+LA LCV+ + + Sbjct: 436 SAVTTA----SFVKYFTSIFVRPP----AKEITVKEVPVSMWASQLILAVLCVIFGVYPA 487 Query: 494 WLAPKIMHIAHAF-TNTPPATVASGIALVPG 523 I + TP TV G+ + G Sbjct: 488 LPLEAISKAVDSVGVTTPSITVFPGLIVSDG 518 >UniRef50_Q21TB8 NADH dehydrogenase (Quinone) n=2 Tax=Proteobacteria RepID=Q21TB8_RHOFD Length = 671 Score = 203 bits (517), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 193/612 (31%), Positives = 300/612 (49%), Gaps = 29/612 (4%) Query: 68 FEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREY-EGKGAAAMGF-FMNIFIASM 125 + L R+D+L AF + + ++ S+Y++ Y+R+Y + + F +N+ S Sbjct: 64 YPIGTLHFRLDALGAFFLSWSLPMTLLGSVYAMGYLRKYFDSPRHIGVHFGLLNMISLSF 123 Query: 126 VALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSIN-AGMLYFFIAHAGSVLIMIAFLL 184 + + V ++A F++ +E+ +LS+W LVI + AG Y H G + ++ A ++ Sbjct: 124 ILVYVGEHAVTFLLGWEIAALSAWLLVIWDYPNQKVRFAGFNYLVSTHVGLIFLVAAVMI 183 Query: 185 MGRESGSLDFASFRT-LSLSPG-LASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHA 242 + + S + +S +PG + + VFLL FG K+ P HSWLPRAH AAP+H Sbjct: 184 LYTNTQSWFLDDYGDWMSQNPGTVRNTVFLLLVTSFGLKSAFFPFHSWLPRAHAAAPAHV 243 Query: 243 SALMSGVMVKIGIFGILKVAMDLLAQTGLP-LWWGILVMAIGAISALLGVLYALAEQDIK 301 SALMSGV+ K G++ ++ L +G P W G ++A SA++G LY + ++D+K Sbjct: 244 SALMSGVIHKAGLYALVH----FLMISGKPDEWMGWFLIAFSVTSAVVGGLYTVGQRDLK 299 Query: 302 RLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGA 361 RLL +S+ ENVGI + GV +GLS P L +G G L H+LNHA FK LF AG Sbjct: 300 RLLGYSSTENVGIAGIGFGVGCLGLSWDMPTLVALGFGGGLLHVLNHAFFKCQLFYAAGC 359 Query: 362 IISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVE 421 + H D+E++G L K MP TA +IG +AISA+PP NGF SE+ + LF+ + Sbjct: 360 VYQIKHVIDIERLGGLFKLMPVTAVCFIIGGVAISALPPFNGFASEFLIYSGLFTGESIN 419 Query: 422 AVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLL 481 A +L + LA G ++ + + +G+ F G R EA E M+ M+L Sbjct: 420 IWA-KLTLALTAAALAFVGAVSALSITRAFGVIFLGNARDASLPEAHEASGWMLFPMVLH 478 Query: 482 AALCVLIALSASWLAPKIMHIAHAFTN-TPPATVASGIALVPGTFHTQVTPSLLLLLLLA 540 V++ ++ + + F + TP A + V GT S L+ +L Sbjct: 479 TIGTVVLGVAPTLGFAMVAAPTALFLHLTPDAVALDTLQSVTGTLLRIGAISAGLVAVLV 538 Query: 541 MPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQ 600 + L L L R +R R W CGYG NA MQ FSA F R + Sbjct: 539 VVLA--LVGLRARLKRQTPNRNA-TWGCGYGAPNAR-------MQYTGGSFSADFAGRFK 588 Query: 601 LDPTLRLNKGLAHVTARAQSTEPFWD-----ERVIRPIVSATQRLAKEI-QHLQSGDFRL 654 + L L + A + + D ER + ++S A ++ Q L D RL Sbjct: 589 -NIMLMLQRKKAPAGYFPRDSYVITDCVDAVERRLFAVISHGDESASDLSQKLHEDDPRL 647 Query: 655 YCLYVVAALVVL 666 +AA+V + Sbjct: 648 AFSAGLAAIVAI 659 >UniRef50_A6TVL4 NADH dehydrogenase (Quinone) n=2 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TVL4_ALKMQ Length = 694 Score = 203 bits (517), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 139/456 (30%), Positives = 242/456 (53%), Gaps = 34/456 (7%) Query: 73 LTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMD 132 L+ ++D LS M +L + S+Y+ YM + + +M++ ++ ++ Sbjct: 154 LSFKVDMLSFIMAATAGVLWFLVSIYAHDYMGIENHRNRFYL--WMSVTFGGILGTVMAG 211 Query: 133 NAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSL 192 + F + FE+M+ SS+FLV Q K SI AG Y ++ AG + I++ +L+ +G+L Sbjct: 212 DLFTMFLFFEIMTFSSYFLVAHNQSKESILAGNSYIYMGVAGGLSILLGMILLYAYTGTL 271 Query: 193 DF----ASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSG 248 +F + + L L + +F+ GFG KAGM+PLH WLP+AHP AP+ ASAL+SG Sbjct: 272 EFIPLASEIKDLGWVKYLMTGLFVG---GFGIKAGMLPLHIWLPKAHPVAPTPASALLSG 328 Query: 249 VMVKIGIFGILKVAMDLLAQT-------GLPLW-----WGILVMAIGAISALLGVLYALA 296 +++K+G +GIL+V++ + LW G +++ IG I+ ++GV AL Sbjct: 329 ILIKVGAYGILRVSISFFVPSITEISGYADSLWEVSQKLGAVIIWIGIITMVVGVFMALQ 388 Query: 297 EQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLF 356 + ++K++LA+ ++ +G I++ +GVA + +G G ++H++NHALFK LLF Sbjct: 389 QSNMKKMLAYHSISQMGYIVMGIGVAT-----YLGYKGAMGFSGGIYHMVNHALFKALLF 443 Query: 357 LGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFS 416 + G + R H DM K+G + ++MP+TA C+I L I+ +P NGF S+ ++ Sbjct: 444 MVVGLVYLRTHELDMYKLGGMWRKMPFTAFLCIIAALGITGMPGFNGFASKSILHHAIIE 503 Query: 417 LSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGA-PRSTHAEEAQEVPNTMI 475 + + A M+ V+ G V F+K++ F G P E ++ M Sbjct: 504 AYEYGHPSFRYA---EMIFTVVSAG-TVCSFIKLFSFVFLGKCPEKYKDIEGEK--GMMD 557 Query: 476 VAMLLLAALCVLIALSASWLAPK-IMHIAHAFTNTP 510 +AM LA + + + +++ K I+ A FT P Sbjct: 558 LAMGGLALMIIAVGQVPNFMMDKFIIPAARTFTYDP 593 >UniRef50_Q3AB32 Carbon monoxide-induced hydrogenase, membrane anchor subunit n=2 Tax=Clostridia RepID=Q3AB32_CARHZ Length = 1274 Score = 201 bits (512), Expect = 6e-50, Method: Compositional matrix adjust. Identities = 134/424 (31%), Positives = 227/424 (53%), Gaps = 40/424 (9%) Query: 76 RMDSLSAFMVLVISLLVVVCSLYSLTYMR--EYEGKGAAAMGFFMNIFIASMVALLVMDN 133 DSLS F L+++ + + +LYS+ Y + Y + + + + + + + Sbjct: 283 NFDSLSKFFALLMAFIGFLVTLYSVGYFKAKPYANRYFFFLLLMLGTLLGLTTSKELGN- 341 Query: 134 AFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLD 193 F V +E+M+ +S+FLVI Q + ++ AG YF + +G+ ++++A L + + GSLD Sbjct: 342 ---FYVFWELMTWTSYFLVIQEQTQKALRAGFKYFIMCTSGAYIMLLAILTLHVKLGSLD 398 Query: 194 FASFRT--LSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMV 251 + LSPGL V + GFG KAG++PLHSWLP AHP APS SA MSG++ Sbjct: 399 LTTISANLQVLSPGLMLVVLGMFIIGFGVKAGLVPLHSWLPDAHPVAPSSISAPMSGILT 458 Query: 252 KIGIFGILKV-----AMDLLAQTGLPLWW---GILVMAIGAISALLGVLYALAEQDIKRL 303 K GI+G++++ + LL + G + G ++ +GA + L G + AL + D+K++ Sbjct: 459 KTGIYGLVRILFVVFGVSLLTKVGTTGQFSTIGFIISLLGAFTLLYGEIMALLQTDVKKM 518 Query: 304 LAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAII 363 LA+ST+ VG I++ +GV T + +GAL+H+LNHA+ K LLFL GA+I Sbjct: 519 LAYSTMAQVGEIVITLGVG-----------TYLSFIGALYHILNHAIMKNLLFLAVGALI 567 Query: 364 SRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAV 423 R+ + ++ K+ + + MP T+ IG LAI +PP NGFIS++ +L + Sbjct: 568 LRVKSQEINKLKGIGRVMPVTSLCFSIGILAIMGLPPFNGFISKFLMLYALVQSGHLALA 627 Query: 424 ALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAA 483 +++ ++ GG ++K+ I F QE P TM++ +++L Sbjct: 628 G-------LILLGSILGGF---YYLKVVRIIFF---EKYEGPARQEAPITMLIPIVILTG 674 Query: 484 LCVL 487 L + Sbjct: 675 LSIF 678 Score = 124 bits (312), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 127/468 (27%), Positives = 217/468 (46%), Gaps = 43/468 (9%) Query: 77 MDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFW 136 +D S +I+ + V+ LYSL YM + + F + I ++ + V + F Sbjct: 762 LDIFSRSFAFLIAFIGVLNLLYSLGYMEHEHAQNRFYL--FFTLMIGGLLGVAVSKDLFN 819 Query: 137 FIVLFEMMSLSSW---FLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLD 193 F +E+MS SW F++I + ++ G YF + G+ L+++ L++ +G+ + Sbjct: 820 FFAFWEIMS--SWTLYFVIIHEETSEALREGFKYFIFNYVGANLLLLGLLVLTVNAGTFE 877 Query: 194 FASF--RTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMV 251 + R +L GL + +L GF KA M+P P AP+ S +S V++ Sbjct: 878 MSELAGRLSALPTGLVALGLILMLIGFAMKAAMLPFRIDYQMHPPTAPTPVSGYISSVLL 937 Query: 252 KIGIFGILKV-----AMDLLAQTG----LPLWWGILVMAIGAISALLGVLYALAEQDIKR 302 K FG++K+ + LL++ G +P IL G ++ L+ AL + +KR Sbjct: 938 KSAPFGMVKLFYVFGGVALLSKLGQLGDMPSLMYILAWVSG-LTILMAAALALLQSGMKR 996 Query: 303 LLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAI 362 LL + TV +G I+L + + L V NH LFK LLFL AGAI Sbjct: 997 LLIYHTVSQMGYIILGISLGSSLGLAGGLLHLV-----------NHMLFKNLLFLVAGAI 1045 Query: 363 ISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEA 422 + + D++++G + ++MP T + IG +I+ IPP NGF S+W +++ S+ + Sbjct: 1046 MVKTGIGDLDRLGGIGRKMPVTLSVFAIGTFSIAGIPPFNGFTSKWLIYEA--SMEKGYV 1103 Query: 423 VALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGA-PRSTHAEEAQEVPNTMIVAMLLL 481 L+ +++ LA F+K F G P+ E E P TM + M++L Sbjct: 1104 FLALLSLLASVLTLA--------SFLKFLHSAFFGQIPK--ELENVTEAPWTMQIPMVIL 1153 Query: 482 AALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQV 529 A LC++ + I I + TP + GI GT++ + Sbjct: 1154 AVLCMVFGIFPGIPLATIAAIERSLGLTPVSVTLFGIDSGLGTWNAGI 1201 Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 55/218 (25%), Positives = 97/218 (44%), Gaps = 29/218 (13%) Query: 275 WGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLT 334 +G++++ +G + ALL +++ + L S++ +G +LL +G T Sbjct: 16 FGVMLLLVGELVALL------RWKNLIQFLIISSIAEIGFVLLGLGTG-----------T 58 Query: 335 VVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLA 394 VG GAL HL + +GL+FL A A I R H+ +EK+ + ++MP T G + Sbjct: 59 YVGTSGALLHLEYQIVMRGLVFLAAAAFIFRGHSASVEKLQGIGRKMPVTTTLFGFGLFS 118 Query: 395 ISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPI--AMVMLAVTGGLAVMCFVKMYG 452 + + P G IS++ + + A+ G I A+ L V ++CF Sbjct: 119 VMGLSPFKGSISKFLIIYAAIESGHWLSAAIATFGSIIEAVYFLQV---FQILCFED--- 172 Query: 453 ITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIAL 490 AEE +E ++ +L+L L L+ L Sbjct: 173 ----PVQEGPGAEEVRETSPGLMAVLLVLGVLTALMGL 206 >UniRef50_B6YT76 Hydrogenase 4, component B or formate hydrogen lyase, subunit 3 n=1 Tax=Thermococcus onnurineus NA1 RepID=B6YT76_THEON Length = 659 Score = 199 bits (507), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 152/466 (32%), Positives = 254/466 (54%), Gaps = 43/466 (9%) Query: 33 KLSGITSLVG---------GVIGIISGITQLHAGVTLVARFAPPFE-FADLTLRMDSLSA 82 LS I+ L+G V+ I+ ++ L ++R P E F + L +DSLS Sbjct: 10 SLSAISGLIGDFKRSIKISSVLSAIASLSLLGIAAHALSRGLPVQESFLGIPLIIDSLSL 69 Query: 83 FMVLVISLLVVVCSLYSLTYMREYEGKGAA-AMGFFMNIFIASMVALLVMDNAFWFIVLF 141 + +I+LL +V S+YS++YM + G A F+ S+V + + N WF+ + Sbjct: 70 PFLFIIALLSLVVSVYSISYMEVHRDTGRPLAYTILYGTFVLSIVFVALTSNLLWFVFFW 129 Query: 142 EMMSLSSWFLVIARQDKTSINAGMLYFFIAH-AGSVLIMIAFLLMGRESGS--LDFASFR 198 E+M+L+S+ V R+ +AG+ Y A +V + +A ++ +GS +D+A+ R Sbjct: 130 ELMTLTSFIFVSWREQ----DAGIKYLLTMQLANTVPLFVALGIIYSATGSFSVDYATLR 185 Query: 199 TL--SLSP---GLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKI 253 + SLSP L A+FL+ F AK+G +P W+P A+ AAPS+ ++LM+GVM K+ Sbjct: 186 EVASSLSPVQLKLLYAMFLVTFL---AKSGSVPFQFWVPDAYEAAPSNIASLMAGVMEKM 242 Query: 254 GIFGILKVAMDLLAQTGLPLWWGI--LVMAIGAISALLGVLYALAEQDIKRLLAWSTVEN 311 ++G+++ L LP GI +++ +G ++ G LYAL E KRLLA+S+V Sbjct: 243 AVYGLIR-----LLCNALPCSEGIGYVLVIVGILTMTFGTLYALRETHAKRLLAYSSVGQ 297 Query: 312 VGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDM 371 +G I AVG+ M+ L++ L + L +FH NH LFKGLLFL +G T D+ Sbjct: 298 MGYIWFAVGMGMIFLTMGMESLAYLAFLAGVFHSFNHTLFKGLLFLISGNFEYSAGTADL 357 Query: 372 EKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPI 431 ++G L + MP+++ +IG L+++ +P +GF+S+W +Q+ + + L + G + Sbjct: 358 NELGGLRRAMPYSSLFTVIGALSLAGVPLFSGFLSKWMIYQAGY----YSGIGLFVFGSV 413 Query: 432 -AMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIV 476 A+ M AVT + +K+Y F G P E A+EVP+ M++ Sbjct: 414 MAVFMSAVTLAYS----LKLYTSAFGGEPNE-RTENAREVPSGMLL 454 >UniRef50_B2A694 NADH dehydrogenase (Quinone) n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A694_NATTJ Length = 748 Score = 199 bits (507), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 135/396 (34%), Positives = 212/396 (53%), Gaps = 20/396 (5%) Query: 73 LTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMD 132 L R+DSL +ISL+ + +LY+ Y+ + FF + + + V Sbjct: 80 LIFRLDSLGFLFTALISLIWFLATLYATEYISHEHNRNR--FYFFWLFTFGATLGVFVTG 137 Query: 133 NAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSL 192 + F V FEMMSL+S+ LVI +DK ++ AG L+ F+ G + I+ +M +L Sbjct: 138 DLFGLFVFFEMMSLTSYVLVIHEEDKDAMRAGNLFLFLGIGGGLAILFGLFIMYFNLETL 197 Query: 193 DFASFRTLSLSPGLASAVFLLAFF-GFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMV 251 + A ++ G+ V LL F GFG KAG++PLH WLP+AHP AP+ ASA++SG+++ Sbjct: 198 EIAPMLGDMVAAGVNIPVLLLLFIIGFGIKAGIVPLHIWLPKAHPVAPTPASAILSGLLI 257 Query: 252 KIGIFGILKV---AMDLLAQTGLPLW------WGILVMAIGAISALLGVLYALAEQDIKR 302 K G++G+ +V M + + L+ WG+ + IG I+ +LG L AL + K+ Sbjct: 258 KTGVYGLWRVFLMVMGPASSQEVELYQQYITNWGMGLFWIGIITMVLGALMALLQTSAKK 317 Query: 303 LLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAI 362 +LA+S+V VG I++ +G A V L P +G G + H++NHALFK LFL GAI Sbjct: 318 MLAYSSVSQVGFIIMGLGAA-VYLGTDGP----IGFAGGIMHVINHALFKACLFLIVGAI 372 Query: 363 ISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEA 422 R H D++++ + K+MP+ A +I L I+ +P NG+ S+ +LS V Sbjct: 373 FIRTHLLDIDRVRGMFKQMPFMGIAFIIAALGIAGVPLFNGYASKTILHH---ALSEVSY 429 Query: 423 VALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGA 458 + A IA + T L V F+K++ F G Sbjct: 430 LTPGTAMFIADKIFVFTSALTVSYFIKLFRGLFLGK 465 >UniRef50_A1ASR6 NADH dehydrogenase (Quinone) n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ASR6_PELPD Length = 633 Score = 199 bits (505), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 154/538 (28%), Positives = 263/538 (48%), Gaps = 49/538 (9%) Query: 73 LTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMD 132 L L +D LS+ +L+ L+ V +LYS+ ++ ++ K AA F+ +F+ M +L + Sbjct: 75 LRLYVDGLSSIFLLLAVLIGVCAALYSIVHVEKFPTKSAAMYHPFLLLFVGGMYGILSIT 134 Query: 133 NAFWFIVLF-EMMSLSSWFLVIARQDKTSINAGMLYFFI----AHAGSVLIMIAFLLMGR 187 + WF F ++M++ S+ L++ +K I + + A ++ Sbjct: 135 DTMWFFCAFWQLMTIPSFILMLFESEKPGIKGAAFKYLVFMEAAMVAAMAGAAMIAGGPA 194 Query: 188 ESG-SLDFASFRT-----LSLSPGLASAVFLLAFFGFGAKAGMMPLHS-WLPRAHPAAPS 240 E G + DF ++ +PG + L GFG K GM P W+P A+ AAPS Sbjct: 195 EPGLAYDFDVLSEGIPALVATNPGALTGCLALFLVGFGIKVGMWPFGQLWVPDAYAAAPS 254 Query: 241 HASALMSGVMVKIGIFGILK-----VAMDLLAQTGLPLWWGILVMAIGAISALLGVLYAL 295 +AL+SGVM K G++G+++ V D+L Q + W G+ + +G I+ G + + Sbjct: 255 PVTALISGVMSKTGVYGLMRTFLWLVPADVLGQYDMSRW-GMALAILGTITLFTGTMQGM 313 Query: 296 AEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDP---LLTVVGLLGALFHLLNHALFK 352 + D KRLLA+S+V +G I+LA+G + + D L + G L H +NH +FK Sbjct: 314 KQDDTKRLLAFSSVGQLGYIILALGACVALVPSGDNRLLALAAIAFCGGLLHAINHGIFK 373 Query: 353 GLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQ 412 GLLF AG++ T D+ KMG L K MP T A LI I+ +P LNGF+S+W + Sbjct: 374 GLLFFSAGSLYQATGTQDLNKMGGLWKYMPVTGFAVLIASFGIAGVPLLNGFVSKWSIYV 433 Query: 413 SLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQ---- 468 + S A L + IA++ A+T + ++K +G+ F + ++A Sbjct: 434 ATIQGS-TSAKYLAVCAIIAILTSAMT----LAMYIKFFGVAFLSRQSTVVKQQAAKQGN 488 Query: 469 -EVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAH----------AFTNTPPATVASG 517 EV T + L++A LC++I L+ + + + + A NT A +G Sbjct: 489 LEVGMTQQLPQLIMALLCIVIGLAPGAVYQVLGQVLNTSRQGFAEKLADANTMSAGATTG 548 Query: 518 IALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRR-AAFRRTGDAWACGYGWEN 574 + + G +L + +++A+ L ++ S++ + R++GDAW CGY E Sbjct: 549 LFAIGGG-------ALYVPIVIAIVLAVAFVIVYTFSKQGGSTRKSGDAWLCGYAREE 599 >UniRef50_B2A3T0 NADH dehydrogenase (Quinone) n=2 Tax=Clostridia RepID=B2A3T0_NATTJ Length = 500 Score = 199 bits (505), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 136/460 (29%), Positives = 240/460 (52%), Gaps = 37/460 (8%) Query: 61 VARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMRE--YEGKGAAAMGFFM 118 +A PPF ++ +D+L + L+ S + ++ ++YSL YM++ Y G+ A+ Sbjct: 68 LANLIPPF---GISFMVDTLGFGLSLLASFIWMLVTIYSLEYMKKENYTGRYYPAL---- 120 Query: 119 NIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLI 178 ++ ++ + L + + F + FE+MSL S+ L+I + K ++ AG Y + G + + Sbjct: 121 SLTLSGSMGLFLAGDLFTMFIFFEIMSLVSYLLIIHNETKEALRAGYKYLIVTIIGGLFL 180 Query: 179 MIAFLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAA 238 ++ S ++ + +S LA A FL GFG KAGM+PLH WLP AHP A Sbjct: 181 FFGIIITFELSQTITLSEMGIISTPTSLAFAGFLSFVIGFGMKAGMVPLHIWLPEAHPVA 240 Query: 239 PSHASALMSGVMVKIGIFGILKVAMDLLA-QTGLPLWWGILVMAIGAISALLGVLYALAE 297 PS ASAL+SG+M+K G +G++++ + Q L W +++ + I+ LG A+ + Sbjct: 241 PSPASALLSGIMIKTGAYGLIRIMFHVFDYQMILEANWHLILAVVAVITIFLGSAVAITQ 300 Query: 298 QDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFL 357 +D+KR LA+S++ +G ILL + + LT + G +FH+ +HA K LFL Sbjct: 301 EDLKRRLAYSSIGQMGYILLGLAI-----------LTETAMTGDIFHIFSHAFMKSTLFL 349 Query: 358 GAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSL 417 AGA+I + + + + + MP T + I LA+ IPPLNGFIS+W SL Sbjct: 350 AAGAMIMKTGKKKIADLKGVGRAMPLTMLSFTIAALAMIGIPPLNGFISKW-------SL 402 Query: 418 SRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAE-EAQ----EVPN 472 S AL+ P +V+L ++ + + ++ + + G T + E++ E P Sbjct: 403 SL---GALEAGQPYYVVILLISSLMNSVYYLPIINTAYFGKSEETDDDVESKGVISEAPM 459 Query: 473 TMIVAMLLLAALCVLIALSASWLAPKIMHI-AHAFTNTPP 511 M++ + +L C++++L + + ++ + A A N P Sbjct: 460 KMVMPVAILGFSCLILSLFPTNIPYELAQLAAKALINGNP 499 >UniRef50_C5A3D6 Formate hydrogenlyase I subunit D (Mhy1D) n=2 Tax=Thermococcus RepID=C5A3D6_THEGJ Length = 664 Score = 198 bits (503), Expect = 7e-49, Method: Compositional matrix adjust. Identities = 151/441 (34%), Positives = 230/441 (52%), Gaps = 26/441 (5%) Query: 68 FEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAA-AMGFFMNIFIASMV 126 F + + + LS +L+I ++ V SL+++ YM +E G N F+ASM Sbjct: 55 FSLFGIPMNVSGLSNVFLLIIGIVGVAASLFAINYMDLFEKTGKGWVYAIAYNTFLASMT 114 Query: 127 ALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMG 186 ++ +D+ +F++ +E+M+LSS+ LV + +NA + Y+ H + + FL +G Sbjct: 115 LVVTVDSMEYFVMSWELMTLSSFILVFFSEKARDVNASVKYYITMHFLDTIPL--FLALG 172 Query: 187 RES---GSLDFASFRTL--SLSPGLASAVFL--LAFFGFGAKAGMMPLHSWLPRAHPAAP 239 G+ + +F + +LS S + L F AKAG+ P W+ + AAP Sbjct: 173 TAYSLIGNFEELTFENIGAALSTHHTSRLVFAGLLMIAFTAKAGLFPFSFWVAETYRAAP 232 Query: 240 SHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQD 299 SH SA+M+G M K+ ++GIL + G GI+V G I+ LYAL E + Sbjct: 233 SHVSAIMAGAMEKMALYGILALVWKTAGIEGDA---GIIVALAGMITITYATLYALRENN 289 Query: 300 IKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGA---LFHLLNHALFKGLLF 356 KRLLA+S++ +G I L +G+ MV L L +G LGA LFH LNHA+FK LF Sbjct: 290 AKRLLAYSSISQMGYIWLGIGIGMV-LVPKGGFLGTIGALGAFAGLFHALNHAIFKASLF 348 Query: 357 LGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFS 416 L AGA+ R T D+ ++G L +RM +TA A L LAIS +PP NGFIS+W + S +S Sbjct: 349 LSAGAVEYRTGTVDLNELGGLGRRMKFTALAALFASLAISGVPPFNGFISKWLIYVSGYS 408 Query: 417 LSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIV 476 S L + G + V + G LA +K YG F G + E +EVP M++ Sbjct: 409 SSN----PLLIFGAVLAVFFS-AGTLAYS--MKFYGAQFGGEMK--RYENVEEVPAGMLL 459 Query: 477 AMLLLAALCVLIALSASWLAP 497 +LA L ++I + + P Sbjct: 460 GQWILAGLTLIIGVFPRIVVP 480 >UniRef50_A7HGW3 NADH dehydrogenase (Quinone) n=4 Tax=Anaeromyxobacter RepID=A7HGW3_ANADF Length = 670 Score = 195 bits (496), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 162/402 (40%), Positives = 238/402 (59%), Gaps = 8/402 (1%) Query: 73 LTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGA-AAMGFFMNIFIASMVALLVM 131 L L +D LSA + I L + +++ YMR + + + A F N+ +ASM L+ Sbjct: 69 LALGLDPLSAVFAVAIFALGLAAAVFGAGYMRAHLARRSLGAFLFSFNVLLASMALLVAA 128 Query: 132 DNAFWFIVLFEMMSLSSWFLV-IARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESG 190 A FIV +E M++SS+ LV + +D A Y +H G+ + FL +G +G Sbjct: 129 RQALLFIVAWEAMTVSSFLLVGLEHEDGAVRMATRTYLVASHLGAAFLFALFLTLGHAAG 188 Query: 191 SLDFASFRTLSLSPGL---ASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMS 247 SL F +F L A+ +F A GFG KAG++PLH WLP AHPAAPSH SALMS Sbjct: 189 SLRFEAFAALGAGARGALPATLLFAFALVGFGTKAGLVPLHVWLPEAHPAAPSHVSALMS 248 Query: 248 GVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWS 307 GV+VK+GI+GIL+ A+ L P+ G+ + A+G + A+ +L AL ++D+KR+LA+S Sbjct: 249 GVLVKMGIYGILR-ALSFLPPA--PVGHGLALAAVGLLGAVAALLLALGQRDLKRILAYS 305 Query: 308 TVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLH 367 TVENVG++ +GV + G + P + +G+ GAL H+ NHAL KGL F+GAGA++ Sbjct: 306 TVENVGLVAFGLGVGLAGAAAGAPTVAALGVAGALLHVWNHALMKGLAFMGAGAVVHGAG 365 Query: 368 THDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQL 427 T D+E+MG L +RMP +A ++ A++A+PPLNGF+SEW + L R L L Sbjct: 366 TRDVERMGGLLRRMPVSAGLLVLAAAALAALPPLNGFLSEWLLYLGLLDGGRGATPGLAL 425 Query: 428 AGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQE 469 +A+ +LA+ G LA + F ++ G G+PRS A A E Sbjct: 426 LAYLALAVLALVGALAAVVFTRLVGAALLGSPRSAAAAAAHE 467 >UniRef50_A8JYL0 Formate hydrogenlyase subunit D n=1 Tax=Thermococcus litoralis DSM 5473 RepID=A8JYL0_THELI Length = 603 Score = 192 bits (487), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 133/422 (31%), Positives = 230/422 (54%), Gaps = 42/422 (9%) Query: 72 DLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVM 131 + T D++S F +++ + S+Y+ YM AA F + SM +++ Sbjct: 53 EFTFMTDTISRFFCILVGISGFAVSIYTTEYMEPRHLNLAAYPAF-----VLSMALIVIS 107 Query: 132 DNAFWFIVLFEMMSLSSWFLVIARQDK-TSINAGMLYFFIAHA-GSVLIMIAFLLMGRES 189 + FI+ +E+M+++S+ L++ D + AG++Y HA + +++A + Sbjct: 108 RDFLGFIIFWELMTIASYILIVTYYDSPETKKAGLIYLVAMHAFNTAPLLLAIGAIYSNF 167 Query: 190 GSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGV 249 G+L F++ + + P FL+ GF +KAG+ P+H WLP AHP APS+ SAL+SG Sbjct: 168 GTLSFSTLQG-AYVPTWVIWAFLI---GFMSKAGIFPIHFWLPEAHPVAPSNVSALLSGT 223 Query: 250 MVKIGIFGILKVAMDLLAQTGLPLWWGILVMA-----IGAISALLGVLYALAEQDIKRLL 304 M+K+ I+G++++ + L+ G +V+A + ++ ++G + AL ++DIKR++ Sbjct: 224 MLKMAIYGMIRI---------IELFPGSVVIARAMVVLAVLTIVIGAIMALVQKDIKRIM 274 Query: 305 AWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIIS 364 A+S+V+N+G + LA+G + + D L + L L H NH +FK LLF+ +G ++ Sbjct: 275 AYSSVDNMGYLFLALGAYI----MLDETLKKIAFLAVLLHTFNHLVFKNLLFMLSGNVLH 330 Query: 365 RLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVA 424 D+ G L K+MP+TAA ++G L++SA+PPLNGFIS+W +Q+ F LS+ Sbjct: 331 ATGRKDLGLRG-LGKKMPFTAAMMIVGILSVSAVPPLNGFISKWLIYQATF-LSKDP--- 385 Query: 425 LQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAAL 484 L + G I + L + ++K+Y I F G P E E M+ +LA L Sbjct: 386 LLVGGGIVSLF---ASALTLTAYIKIYRI-FSGEPNV----ETHEAAPLMLAGEAILAFL 437 Query: 485 CV 486 CV Sbjct: 438 CV 439 >UniRef50_B8DNI8 NADH dehydrogenase (Quinone) n=4 Tax=Desulfovibrio vulgaris RepID=B8DNI8_DESVM Length = 1264 Score = 191 bits (486), Expect = 6e-47, Method: Compositional matrix adjust. Identities = 150/458 (32%), Positives = 245/458 (53%), Gaps = 42/458 (9%) Query: 45 IGIISGITQLHAGVTLVARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMR 104 IG+ SG + AGV LVA + + D T+ D LS ++I+ + +V ++YS Y+ Sbjct: 249 IGLASGRARALAGVVLVAA-SVALTWTDTTI--DPLSRLFGVIIAGIGLVVAVYSTGYI- 304 Query: 105 EYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAG 164 + + A FF+ + S+ L + + F V +E+M+ SS+FLV + +A Sbjct: 305 -HHDRRAGGYWFFLLLMCGSLSGLALARDFGGFYVFWELMTFSSYFLVAHEATDKAFHAA 363 Query: 165 MLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRTLSLS---PGLASAVFLLAFFGFGAK 221 + YF + AG+ ++ F+L+ ++G+LDFA+ L+ + P + AV +LAF GF K Sbjct: 364 VKYFVMCVAGACAMLPGFMLLSAQAGTLDFAALAGLAATLPAPVVKGAV-VLAFVGFAVK 422 Query: 222 AGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQT---------GLP 272 AG++P H WLP AHPAAPS S +SG++ K G++G +++ + + G Sbjct: 423 AGLVPGHGWLPDAHPAAPSSISGPLSGILTKTGVYGTVRLMLAVFGSAVLLKAGESAGGF 482 Query: 273 LWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPL 332 G+LV A+G + L G L AL + D+KRLLA+ST+ VG I + +G+ Sbjct: 483 SSMGLLVTALGTATMLYGELMALKQDDLKRLLAYSTMGQVGEIFMVIGLG---------- 532 Query: 333 LTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGC 392 T + G+L H+LNHA+ K LLFL AG +I R + + + +A+ MP+TA ++G Sbjct: 533 -TWLATTGSLLHVLNHAIMKNLLFLCAGGLILRAGSKKLADLAGMARVMPFTAGCMVVGL 591 Query: 393 LAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYG 452 ++I +PP NGF+ ++ Q+L + A+ L G +A G + M V+ Sbjct: 592 ISIMGLPPFNGFVGKYLMLQALVAAGHPAVAAVLLLGSLA-------GCVYYMRIVR--- 641 Query: 453 ITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIAL 490 T P + QE P +M VA +LAALC+++ + Sbjct: 642 -TLVFQPYT--GPMVQEAPVSMRVATGVLAALCLVLGV 676 Score = 154 bits (390), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 123/423 (29%), Positives = 210/423 (49%), Gaps = 37/423 (8%) Query: 77 MDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFW 136 +DS+S LV+ ++ + Y++ YM E+ FF+ + ++ + ++ F Sbjct: 756 LDSISFAFALVVPVIGCLNMFYAVGYM-EHSHTQWRFYTFFL-FMVGGLMGVAASNDLFG 813 Query: 137 FIVLFEMMSL-SSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFA 195 F +E+MS S +F+++ ++ ++ G YFF G+ + + +++ +G F Sbjct: 814 FFTFWEIMSSWSLYFVIVHEENPAALREGFKYFFFNVLGAAFLFLGVVMLSSMAGDPSFG 873 Query: 196 SFRTL--SLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPA-APSHASALMSGVMVK 252 + R+ ++ LA+ L GF KA +P + + HPA AP+ S +S V++K Sbjct: 874 AVRSALPTMPVALAATAVALMAIGFTMKAAQLPFRIDV-QMHPATAPTPVSGYISSVLLK 932 Query: 253 IGIFGILKVAMDLLAQ---TGLPLWWG-----ILVMAIGAISALLGVLYALAEQDIKRLL 304 +FG+ K+ L TGL WG + +G I+ ++ L A+ + D+K +L Sbjct: 933 SALFGLAKLFFVLGGAGFFTGLASQWGQPQVMYAIAWVGGITIVMAALLAVMQSDLKLVL 992 Query: 305 AWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIIS 364 +STV +G ++ VG++L PL G+ G + HL+NH LFK LLFL AG++I Sbjct: 993 IYSTVSQLGYMV-------VGVALGTPL----GMAGGMLHLVNHVLFKDLLFLVAGSLIL 1041 Query: 365 RLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVA 424 H H ++++G + +RMP T IG L++ +PP NGF S+W + +L + V Sbjct: 1042 CTHKHSLDELGGIGQRMPVTLTMFAIGALSVVGVPPTNGFASKWILYHALMAEGEVALAL 1101 Query: 425 LQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAAL 484 L LAG + L + F K F G P S E P M+V M +LAA Sbjct: 1102 LSLAGSV----------LTLAYFAKFLHSAFLGRP-SPELAHVHEAPRIMLVPMGILAAG 1150 Query: 485 CVL 487 C++ Sbjct: 1151 CII 1153 >UniRef50_Q2RUH4 NADH dehydrogenase (Quinone) n=3 Tax=Alphaproteobacteria RepID=Q2RUH4_RHORT Length = 1265 Score = 188 bits (478), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 123/370 (33%), Positives = 192/370 (51%), Gaps = 29/370 (7%) Query: 75 LRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNA 134 L L L+ + + + ++YS+ YM+ G G FF+ + I S++ + ++ Sbjct: 273 LESGDLGGLFALIFAAIGLAVTVYSVGYMKH--GHGVNRYFFFLFLMIGSLIGVATTNHL 330 Query: 135 FWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDF 194 F + +E+M+ S+ LVI Q ++ AGM YF I +G+ ++ L++ + G+ + Sbjct: 331 GNFYLFWELMTWMSYLLVIHEQTAKALKAGMKYFLICASGAYVMHFGILVLHAQLGTFEI 390 Query: 195 ASFRTL--SLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVK 252 + +LSP LA V GF AKAG+ PL+SWLP AHP APS S MSG++ K Sbjct: 391 SEIAPCIGTLSPALAGVVLATFLIGFMAKAGLFPLYSWLPEAHPVAPSSISGPMSGILTK 450 Query: 253 IGIFGILKV-----------AMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIK 301 GI G++K+ L A LP G +++A+G I+ LLG + A + DIK Sbjct: 451 AGILGMVKLLFGIFGVGALGQFGLFAGLSLP---GAVLVALGGITLLLGEVQAYRQTDIK 507 Query: 302 RLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGA 361 RLLA+ST+ +G I + +GV T + L G LFH+ NHA+ K +LF GA Sbjct: 508 RLLAYSTLAQIGEITMVLGVG-----------TSLALAGGLFHVTNHAVMKTMLFFAVGA 556 Query: 362 IISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVE 421 +I R ++ + L K MP+T IG LAI +PP GF+S++ + +V Sbjct: 557 LILRSAGRSLDDLKGLGKVMPFTGLCLGIGLLAIMGVPPFGGFVSKFLMIYACVEAGQVG 616 Query: 422 AVALQLAGPI 431 A+ L G + Sbjct: 617 VAAVILVGSV 626 Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 125/430 (29%), Positives = 208/430 (48%), Gaps = 42/430 (9%) Query: 76 RMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAF 135 R D LS + +I ++ + LYS+ YM G FF + I ++ + D+ F Sbjct: 752 RYDLLSFWFAALIVVVGAINLLYSIGYMAH--GHAQNRFFFFFVMMIGGLLGVTASDDLF 809 Query: 136 WFIVLFEMMSLSSWFLVIARQD-KTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDF 194 F +E+MS + +LVI ++ K S++ G YF G+ + + ++ ++G+ + Sbjct: 810 NFFAFWEVMSSWTLYLVIIHEETKDSLDEGTKYFIFNFVGASFLFLGVAILAAKAGTFEM 869 Query: 195 ASFRTLSLSPGLA----SAVFLLAFFGFGAKAGMMPLHSWLPRAHPA-APSHASALMSGV 249 A +LS + SA +LA G KA +PL + HPA AP+ S +S V Sbjct: 870 ALLPQAALSMPVGWLAVSAGLILA--GLLMKAAQLPLRIDY-QMHPAPAPTPVSGYISAV 926 Query: 250 MVKIGIFGILKVAMDLLAQTGLPLWWG---------ILVMAIGAISALLGVLYALAEQDI 300 ++K+G +G+LK+ + L A GL G ++V I A++ L A+ + + Sbjct: 927 LLKVGPYGVLKIMVALGAGGGLARIAGLGAWMPDPLVVVQVIAALTVLYAGAMAVVQNGV 986 Query: 301 KRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAG 360 KRLL +STV +G +LL + + + +G+ G L H +NH + K +LFL AG Sbjct: 987 KRLLIYSTVSQLGYVLLGLSLG-----------SALGVAGGLMHFVNHMMLKDILFLAAG 1035 Query: 361 AIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRV 420 I+++ H H ++ +G L ++MP T L L++S IPP NGF S+W +Q F Sbjct: 1036 CILAQAHVHSLDDLGGLGRKMPITFGLFLFAGLSLSGIPPFNGFASKWLIYQGAFQ---- 1091 Query: 421 EAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLL 480 G + M A+ L + V + + P S A +E P M++ M L Sbjct: 1092 -------GGHYLLAMAALMSSLFTLAAVLKFTHSAFLGPLSPAAATMREAPPVMLIPMGL 1144 Query: 481 LAALCVLIAL 490 LAA V++ + Sbjct: 1145 LAAGSVIVGV 1154 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 34/135 (25%), Positives = 63/135 (46%), Gaps = 17/135 (12%) Query: 274 WWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLL 333 W G +M IG AL V +D+ R+L +ST+ +G +L+ +G+ Sbjct: 9 WAGAALMLIGEGLALRNV------RDLARMLTYSTIAEIGYVLMGLGIG----------- 51 Query: 334 TVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCL 393 T G GA+ HL A+ + L+ + A +I R + ++ + +RMP+ + G Sbjct: 52 TAAGETGAVMHLGYQAIMRALVVVAAWHLIRRSGSSKLDALVGSVERMPFVSLMFGFGLF 111 Query: 394 AISAIPPLNGFISEW 408 ++ + P G S++ Sbjct: 112 SVMGLSPFKGSFSKF 126 >UniRef50_A1RWL4 NADH dehydrogenase (Quinone) n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RWL4_THEPD Length = 487 Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 122/347 (35%), Positives = 184/347 (53%), Gaps = 12/347 (3%) Query: 71 ADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEG-KGAAAMGFFMNIFIASMVALL 129 A LT+ +DSLSA V ++ L S++S+ Y++ + G + G F N FI SM+ Sbjct: 73 APLTVYIDSLSASFVFAVATLTFAISIFSVGYLKMFYGERSIGYFGTFYNAFIFSMIMTC 132 Query: 130 VMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRES 189 DN WF+ +E+M+ SS+FLVI G LYF + H G I ++ +L S Sbjct: 133 CTDNVLWFLFFWELMTASSYFLVIYEDTPDVRRIGYLYFILMHVGFACIAVSLVLTVLTS 192 Query: 190 GSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGV 249 GS ++ PG+ +A+ LA GFG K G++PLH WLP AHPAAPS+ SAL+SGV Sbjct: 193 GSWSLLKVDPHTIEPGVKTAILALALIGFGMKLGLVPLHVWLPEAHPAAPSNVSALLSGV 252 Query: 250 MVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTV 309 M+ +G++G+ ++++ L A WW + + +S +GVL A+ D KRLLA+S++ Sbjct: 253 MLSMGLYGLTRISLALQANME---WWYSAIAILAVLSVAVGVLCMPAQMDFKRLLAYSSI 309 Query: 310 ENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTH 369 +G+ L++ + G L GL L H++N A KG LF +G ++ T Sbjct: 310 VEMGLASLSLSYYLAGSQL--------GLKAMLMHVVNQAYAKGALFALSGLLLYCAGTK 361 Query: 370 DMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFS 416 + + L P AA L L I +PP F S+ Y S F+ Sbjct: 362 RLSDIRGLWDANPLVAAVLLAAALDIMGLPPFGCFFSKAYIVLSGFN 408 >UniRef50_Q9UYP1 Hydrogenase 4, component F or formate hydrogen lyase, subunit 3 n=1 Tax=Pyrococcus abyssi RepID=Q9UYP1_PYRAB Length = 499 Score = 182 bits (463), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 146/492 (29%), Positives = 261/492 (53%), Gaps = 64/492 (13%) Query: 40 LVGGVIGIISGITQLHAGVTLVARF---------APPFEFA--------DLTLRMDSLSA 82 +VGG II L G+TL++ F + P + + +D LS+ Sbjct: 24 VVGGNRKIIQAYALLGTGLTLISTFKLFQLTYSSSLPIVYTFGKWRAPIGIVYEVDRLSS 83 Query: 83 FMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFI---ASMVALLVMDNAFWFIV 139 + LV ++L+ + ++YS Y+ +G + ++ +++ + ++ +L+ +AF V Sbjct: 84 LIALVTAVLMFLIAIYSYRYLEREKG-----LEWYYTLYLGLESGLLGVLLTGDAFNLFV 138 Query: 140 LFEMMSLSSWFLVIARQD-KTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFR 198 + E+ S++++ LV+ +D K S+ AG+ Y I G+ + +A + G+++FA Sbjct: 139 MIEVTSIAAYALVMFYRDRKDSVLAGLKYALIGAVGTTMYFLALGVFYGTFGTVNFADLS 198 Query: 199 TLSLSPG---LASAVFL-LAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIG 254 S G LAS+V L LA + F KA + P H WLP AHPAAPS SA++SG++V +G Sbjct: 199 EKLHSSGNVVLASSVALVLATWAFLIKATIFPNHFWLPEAHPAAPSPISAILSGLVVNVG 258 Query: 255 IFGILKVAMDLLAQTGLPL---WWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVEN 311 ++ +++ L +GL W ++ +GAIS++ G L ++D+KRL+A+ST+ + Sbjct: 259 VYAMIRFLYTL--YSGLSWIIGWLSFAIIILGAISSIFGALMMNTQRDVKRLVAYSTIMH 316 Query: 312 VGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDM 371 +G +L+AVGV T +GL ALFHL+NHA+ K LLFL G I + ++ Sbjct: 317 MGYLLMAVGVG-----------TQLGLQAALFHLINHAIAKALLFLAVGVFIHVAGSRNI 365 Query: 372 EKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPI 431 + + L ++MP T + I L++ IPPLN F S+ + +L S A Sbjct: 366 DDLAGLGRKMPITTFSLAIATLSLVGIPPLNVFFSKLLLFNALLEKSFFLA--------- 416 Query: 432 AMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAM--LLLAALCVLIA 489 +++AVT +A++ ++++ + G PR E +V ++ ++M L+LA +C+ I Sbjct: 417 --LVIAVTSVIALVAYMRVLYTLWLGKPR-----EDLDVKESISMSMICLILALICIAIG 469 Query: 490 LSASWLAPKIMH 501 L A + K+++ Sbjct: 470 LIAPIVLEKLIN 481 >UniRef50_B8J2B7 NADH dehydrogenase (Quinone) n=2 Tax=Desulfovibrio RepID=B8J2B7_DESDA Length = 1245 Score = 182 bits (462), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 127/399 (31%), Positives = 209/399 (52%), Gaps = 42/399 (10%) Query: 85 VLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMM 144 +++ SL+ +V +YS Y+ G+ FF+ + AS+ ++ +A +E+M Sbjct: 289 LIMTSLVALVVCVYSQGYI---HGRHQGRYWFFLLLTFASLAGIVSSSDAPGLYGYWELM 345 Query: 145 SLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRTLSLSP 204 + +S+FLV+ +++ +AG+ Y+ + G++ ++ L++G+ +P Sbjct: 346 TFASYFLVVHEGRRSAFDAGLKYYIMCAGGALFMLPGLLMLGQG-----------FVPTP 394 Query: 205 GLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMD 264 + A F+L GFG KAG++PLHSWLP AHPAAPS SA +SG++ K+GIFGI+ V + Sbjct: 395 -VVQAAFVLCLAGFGVKAGLVPLHSWLPDAHPAAPSSVSAPLSGIITKMGIFGIVAVLLM 453 Query: 265 LLAQTGLP-----LWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAV 319 + LP W G ++ GA + +LG + AL + DIKR+LA+ST+ +G I L + Sbjct: 454 RPMVSSLPGLFGLSWLGTGLVFTGAATLILGEVMALRQDDIKRMLAYSTLGQIGEIALVL 513 Query: 320 GVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAK 379 G+ T + GAL+H+ NHA+ K LLFLGAGA+I R + + + L + Sbjct: 514 GIG-----------TWLSTTGALWHMFNHAIMKDLLFLGAGALILRSGSRKLADLRGLGR 562 Query: 380 RMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVT 439 +MP+T A IG ++I +PP F S++ Q A AG + + L + Sbjct: 563 QMPFTVACMGIGLVSIMGLPPFGAFYSKFLMIQ-----------AATEAGQLWLAALILG 611 Query: 440 GGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAM 478 G L + + T R + +A E P TM + M Sbjct: 612 GSLVGLVYYTRILKTLVFEERPDYLPKATEAPLTMRLGM 650 Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 125/433 (28%), Positives = 194/433 (44%), Gaps = 52/433 (12%) Query: 77 MDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFW 136 +D+LS L++ LL V Y+L YM + F +V + Sbjct: 742 LDTLSFCFALIVPLLGAVNMAYALGYMEHSHRQWRFYCAF--TAMCGGLVGMAASQYLLS 799 Query: 137 FIVLFEMMSLSSWFLVIARQ-DKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFA 195 F + +E+MS + +L IA + DK S+ YF G+ I + ++G F Sbjct: 800 FFLFWEIMSSWTLYLAIAHEGDKASLREAFKYFIFNVFGAGFIFVGLCVIG------PFT 853 Query: 196 SFRTL-------SLSPGLASAVFLLAFFGFGAKAGMMPLH-SWLPRAHPA-APSHASALM 246 F TL SLSPG A L GF KA +P W + HPA AP+ S + Sbjct: 854 PFSTLLLEGMAPSLSPGAAWLGMALLAAGFVMKAAQLPFRIDW--QMHPALAPTPVSGYI 911 Query: 247 SGVMVKIGIFGILKVAMDLLAQTGLPLWWG--------ILVMAIGAISALLGVLYALAEQ 298 S V++K I G++K+ M L L G + VM IG I+ ++ L AL Sbjct: 912 SSVLLKSAILGLIKLFMLLGGGFALAGVLGGFEQGSISVAVMWIGGITIIMAALQALRSN 971 Query: 299 DIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLG 358 IK + +STV +G ++LAV + H++NH FK LLFL Sbjct: 972 GIKLIFIYSTVSQLGYMVLAVAAGGALGYAG-----------GMLHVINHVFFKDLLFLV 1020 Query: 359 AGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLS 418 GA++ H ++ +G + ++MP+T A I L++ +PP +GF S+W + +L Sbjct: 1021 CGAVMFASHKETLDDLGGIGRKMPFTLAMFAIAGLSVVGVPPTSGFSSKWLIYHALME-- 1078 Query: 419 RVEAVALQLAGPIAMVMLAVTGGLAVMCFV-KMYGITFCGAPRSTHAEEAQEVPNTMIVA 477 AG + +L++ G + M ++ K F G P + +E +EVP M V Sbjct: 1079 ---------AGQPFLALLSLIGSVLTMAYIAKFLHAAFLGQP-ARDLDEIREVPRIMRVP 1128 Query: 478 MLLLAALCVLIAL 490 M +LAA C+L + Sbjct: 1129 MGILAAGCLLTGI 1141 >UniRef50_D1JBE0 Putative NADH-quinone oxidoreductase, subunit M n=1 Tax=uncultured archaeon RepID=D1JBE0_9ARCH Length = 509 Score = 181 bits (460), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 132/427 (30%), Positives = 225/427 (52%), Gaps = 36/427 (8%) Query: 77 MDSLSAFMVLVISLLVVVCSLYSLTYMR-EYEGKGAAAMGFFMNIFIASMVALLVMDNAF 135 +D+L+A+++++I L ++C+++S + + E GK A+ + +FI + + V + F Sbjct: 79 VDALNAYILVIILFLGLLCAIHSKSSVEHELPGKKASFFTLY-QLFITGLCGVTVTGDIF 137 Query: 136 WFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFA 195 V E++SLS++ LV + TS+ AG Y + G+ +I + +GSL+ Sbjct: 138 NMYVFIEILSLSAYALV-GSKGGTSLRAGFTYLIMGSIGACFFLIGIGFLYSVTGSLNIH 196 Query: 196 SFRTLSLSPGLAS----AVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMV 251 L L P S A F+ G G K + PLH+WLP AHPAAPS SA++SG+M+ Sbjct: 197 DLSLL-LPPLYGSKTVQAAFIFITVGMGIKMAIYPLHTWLPDAHPAAPSPISAMLSGIMI 255 Query: 252 KIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGV--LYALAEQDIKRLLAWSTV 309 +G + +++V L P ++ ++ + + V L+A + D+KRL A+S++ Sbjct: 256 MVGFYALIRVLFTLF-----PFYYNYGLILLILGLLSMTVANLFAYFQMDLKRLFAYSSI 310 Query: 310 ENVGIILLAVGVAMVGLSLHD----PLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISR 365 NVGII GVA LS+ P + + GAL H+L+H + K L+FLG+G I + Sbjct: 311 VNVGIITTGAGVAAYILSIEPAGAIPEAASLAMAGALLHILSHGIGKALVFLGSGNIHAS 370 Query: 366 LHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVAL 425 +HT D+ KMG +A+ MP+T+ + +G L++ +PPL GF W L V A+A+ Sbjct: 371 IHTRDLAKMGGIARDMPYTSYSMSVGLLSLLGMPPLIGF------WSKFLILMAV-AMAI 423 Query: 426 QLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPR-----STHAEEAQEVPNTMIVAMLL 480 Q G + MVM + ++ F +Y T+ + A E P +M+ +++ Sbjct: 424 QSIGGVVMVMTFI-----IILFNVIYAATYYLKVAKVLMIESGAARTHEAPFSMVFSVVA 478 Query: 481 LAALCVL 487 A C++ Sbjct: 479 FALACLI 485 >UniRef50_D1Z235 Putative NADH:ubiquinone dehydrogenase n=1 Tax=Methanocella paludicola SANAE RepID=D1Z235_METPS Length = 490 Score = 179 bits (454), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 125/423 (29%), Positives = 216/423 (51%), Gaps = 31/423 (7%) Query: 77 MDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFW 136 +D+ F+ +++ + + YS Y + +F+ + M L N Sbjct: 68 LDAPGIFIGTLVAFIGTLVVFYSFVYKDRTHYDNTYFIMYFL--LMGMMSGLASTYNVIV 125 Query: 137 FIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFAS 196 ++ E ++ S L++ + K +I A +Y I+ +L++ ++ ++G+LD Sbjct: 126 MLIFLEAATVISAVLILFGRTKKAIRATYVYLAISIVEVILVVTGAFILYNDAGTLDLNK 185 Query: 197 FRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHS-WLPRAHPAAPSHASALMSGVMVKIGI 255 ++S G + +L FFGFG KAG++PL WLP AH AP SA MSG+++K + Sbjct: 186 LTAGAVSEGDMFLLAMLFFFGFGTKAGLLPLGIIWLPSAHSEAPPPISATMSGILIKASV 245 Query: 256 FGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGII 315 ++K +G+ ++V+ G ++ L+GV+ AL +DIKRLLA+ ++ +G I Sbjct: 246 VAMVKAIYPFYLISGVETLI-LVVIGFGVLNMLVGVIMALLSEDIKRLLAFHSISQMGYI 304 Query: 316 LLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMG 375 ++ G+A T + GALFH+ NH LFKG LFL GA+I R++T + +MG Sbjct: 305 IMGFGLA-----------TPAAVYGALFHITNHMLFKGCLFLITGALILRVNTRQIHRMG 353 Query: 376 ALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQS--------LFSLSRVEAVALQL 427 L K+MP T LI LA+S +P LNGF+S+ ++ LFS ++ L L Sbjct: 354 GLMKQMPLTGLCFLIASLAMSGVPLLNGFVSKELIYEGSVQAGYPVLFSAFGLDLTILGL 413 Query: 428 AGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVL 487 G +T L C + + + F G P+ ++ +E P M++ +L++A LC++ Sbjct: 414 VG-------WLTSILTFACLIHAFYVMFLGKPKEEF-KDVKEPPLYMLLPILIMAGLCIV 465 Query: 488 IAL 490 I + Sbjct: 466 IGV 468 >UniRef50_B6YWQ6 Hydrogenase 4, subunit 3 n=2 Tax=Thermococcus RepID=B6YWQ6_THEON Length = 520 Score = 175 bits (444), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 128/439 (29%), Positives = 238/439 (54%), Gaps = 53/439 (12%) Query: 76 RMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFI---ASMVALLVMD 132 +D LSA + LV + L+ + S+YS Y+ G + ++ +++ A ++ +L+ Sbjct: 77 EVDKLSALIALVTAGLMFLISIYSYRYLEHENG-----LEWYYTLYLGLEAGLLGVLLTG 131 Query: 133 NAFWFIVLFEMMSLSSWFLVIARQDK-TSINAGMLYFFIAHAGSVLIMIAFLLMGRESGS 191 +AF V+ E+ S++++ LV+ +D+ S+ AG+ Y I G+ + +A ++ G+ Sbjct: 132 DAFNLFVMIEVTSIAAYALVMFYRDRGDSVYAGLKYALIGAVGTTMYFLALGILYGAFGT 191 Query: 192 LDFASFRT--------LSLSPG----LASAVFL-LAFFGFGAKAGMMPLHSWLPRAHPAA 238 ++ A L+ +P +AS V L LA + F KA ++P H WLP AHPAA Sbjct: 192 VNLADLTAKVHGMDFPLTGAPVGDIVVASGVALALATWAFLIKAAIVPNHFWLPEAHPAA 251 Query: 239 PSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGI------LVMAIGAISALLGVL 292 PS SA++SG++V +G++ +++ + T +P I +V+ +GA+S+L G Sbjct: 252 PSPISAILSGLVVNVGVYSLIRFLYTVYGGTLIPELARIVSVLSNIVVVLGAVSSLFGAA 311 Query: 293 YALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFK 352 ++D+KRL+A+ST+ ++G + +AVG+ T +GL ALFHL+NHA+ K Sbjct: 312 MMTVQKDVKRLIAYSTIMHMGYLFMAVGLG-----------TQLGLQAALFHLVNHAIAK 360 Query: 353 GLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQ 412 LLFL AGA I + + +++ + L K+MP + I L++ +PPLN F S+ + Sbjct: 361 ALLFLAAGAFIHAIGSRNVDDLAGLGKKMPVATFSLAIATLSLVGVPPLNVFFSKLLLFN 420 Query: 413 SLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPN 472 +L + GP ++L ++ +A++ +V+++ I + G PR + Sbjct: 421 ALME---------KGLGP--ALILVISSVIALVAYVRVFHIIWLGKPRKDIKIKEHA--- 466 Query: 473 TMIVAMLLLAALCVLIALS 491 +M + L+LA +C+++ L+ Sbjct: 467 SMSLVCLVLAVICIIVGLA 485 >UniRef50_Q895D8 Sodium/proton antiporter shaA n=1 Tax=Clostridium tetani RepID=Q895D8_CLOTE Length = 486 Score = 175 bits (444), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 122/429 (28%), Positives = 219/429 (51%), Gaps = 30/429 (6%) Query: 69 EFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVAL 128 EF D+ L++D L F L++S+L + S YS+ YM+ +EGK FF+ + + + + Sbjct: 64 EFLDIYLKIDKLGVFFSLLVSILWIFTSFYSMEYMK-HEGKENRFFAFFL-VTLGVTLGI 121 Query: 129 LVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRE 188 N + +E+++L+++ LVI + ++ +G Y + G+ +++ + + Sbjct: 122 SFSGNLVTLYLFYEVLTLATFPLVIHSGSREALKSGRKYLIYSFVGATFVLLGMIFLFAV 181 Query: 189 SGSLDFAS---FRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASAL 245 + LDF R L+ L S +++ F GFG KA ++P HSWLP+A AP+ S+L Sbjct: 182 TKGLDFYPKGIIRDFKLNKTLISTSYIVMFLGFGVKAALVPFHSWLPKAM-VAPTPVSSL 240 Query: 246 MSGV-MVKIGIFGILKVAMDLLAQTGLPLWWG-ILVMAIGAISALLGVLYALAEQDIKRL 303 + V +VK G+F ++++ + + L +G ++ IS L+G AL + ++K+ Sbjct: 241 LHAVAVVKSGVFALIRITYYVFGGEIVKLIYGRKYLLLFVTISILMGSFLALHQSNLKKR 300 Query: 304 LAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAII 363 LA+ST+ +G ILL + + L L+G L HL+NHA+ K LF G I+ Sbjct: 301 LAYSTISQLGYILLGILI-----------LNGNSLVGGLLHLINHAVIKITLFFCVGTIM 349 Query: 364 SRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRV--E 421 D++++ + K MP+T I +++ IPP NGF+S+WY Q +V Sbjct: 350 YTRGKTDIDEIKGIGKEMPYTMWCFTISSISLIGIPPTNGFVSKWYLAQGGLLEGKVIFP 409 Query: 422 AVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLL 481 A+ L A AM +L + + V F K ++ E +E P M+V ++L+ Sbjct: 410 AILLISALLTAMYLLPI---ITVAFFKK------DEQHKNVEKIEIKEAPKNMLVPIILI 460 Query: 482 AALCVLIAL 490 + +++ L Sbjct: 461 TCITIVLGL 469 >UniRef50_A2SS19 Membrane bound hydrogenase subunit mbhH n=3 Tax=Euryarchaeota RepID=A2SS19_METLZ Length = 523 Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 136/431 (31%), Positives = 218/431 (50%), Gaps = 37/431 (8%) Query: 67 PFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFI---A 123 PF + +D AFM+L +++ LY ++ +E GK F +++ A Sbjct: 83 PFR---IIFTIDGFGAFMLLSAAIVSFAVVLYLISSQKERSGKSE-----FYALYLLLTA 134 Query: 124 SMVALLVMDNAFWFIVLFEMMSLSSWFLV-IARQDKTSINAGMLYFFIAHAGSVLIMIAF 182 + ++ + F F V E+ SL+ LV R+ + + Y + G ++++ A Sbjct: 135 GVFGMVSTGDMFNFFVFLEINSLAGAALVSYHRRGGIAAEGALKYLIVNTVGGLMVLFAI 194 Query: 183 LLMGRESGSLD---FASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAP 239 L+ + SL+ AS TLS +A +F+ A KAG +P H P A+ AP Sbjct: 195 GLLYAQYNSLNMAVIASQMTLSTLNIIALVLFVAAL---AMKAGSVPFHFATPDAYSVAP 251 Query: 240 SHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQD 299 S +A M V + G++G+ ++ L T + G +V+ +G +S ++GV A+ ++D Sbjct: 252 SGITAAMI-VASQAGLYGMFRILFTLYGDTFNTVTIGWVVIILGVLSMVIGVTMAIPQKD 310 Query: 300 IKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTV----VGLLGALFHLLNHALFKGLL 355 +KRLLA+ V G +LL VGVA+ L DPL + G LFH++NHA++KGLL Sbjct: 311 VKRLLAYHAVSQTGYMLLGVGVALA--VLGDPLAMASYGQTAMEGGLFHIINHAMYKGLL 368 Query: 356 FLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLF 415 FL GA+I R + KMG L M WT LIG LAI+ IPP NGF S+ ++S+F Sbjct: 369 FLAVGAVIYRTGVWSLNKMGGLGHNMKWTMIFFLIGALAIAGIPPFNGFASKLMIYESVF 428 Query: 416 SLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMI 475 + + ++ IAMV+ +T + F+K++ F G P+ E +EVP MI Sbjct: 429 AFNPALSI-------IAMVVSILT----LASFMKVFHSMFMG-PQLPEYAEVKEVPKLMI 476 Query: 476 VAMLLLAALCV 486 M++L + Sbjct: 477 AGMVILTIFVI 487 >UniRef50_B9LA03 CooM n=1 Tax=Nautilia profundicola AmH RepID=B9LA03_NAUPA Length = 1161 Score = 173 bits (438), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 116/329 (35%), Positives = 182/329 (55%), Gaps = 37/329 (11%) Query: 86 LVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALL--VMDNAFWFIVLF-E 142 L+ + ++ + LYS Y++ Y+ F+ + VAL+ M +F LF E Sbjct: 217 LIFAFIITMVFLYSFDYIKTYKT-------FYYSALAVLGVALIEVAMSESFESFYLFWE 269 Query: 143 MMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAF---LLMGRESGSLDFASFRT 199 +M++SS+ L++ + SI+A LYF + AG+ L+ +AF G ES F+ + Sbjct: 270 LMTISSYLLIMHSRSDESISAAKLYFVMCIAGAYLLQLAFSNFYAFGIES----FSEVKN 325 Query: 200 LSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGIL 259 LSLS +A+ L+ GFG KAGM+P+H WLP AHP APS SA +SG++ K GIFGI+ Sbjct: 326 LSLS----TAILLM--LGFGVKAGMVPMHKWLPVAHPEAPSSISAPLSGILTKAGIFGII 379 Query: 260 KVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAV 319 + L + L++ IG ++ G + L E+D+KRLLA+ST+ +G I+ + Sbjct: 380 AIVYIFNFHA---LVFSYLLIGIGLVTLFYGEIKTLFEKDLKRLLAYSTIGQIGEIITVL 436 Query: 320 GVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAK 379 G L++ L GAL+H++NHA+ K LLFL AG +I + +++ + + K Sbjct: 437 G-----------LMSTAALSGALYHIINHAVVKDLLFLSAGLLIMSAGSRNLDDLKGIGK 485 Query: 380 RMPWTAAACLIGCLAISAIPPLNGFISEW 408 ++P A IG AISA PP F S++ Sbjct: 486 KLPILAFPLGIGIFAISAFPPFGNFNSKF 514 Score = 118 bits (296), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 134/478 (28%), Positives = 216/478 (45%), Gaps = 57/478 (11%) Query: 30 LAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAPPFEF-ADLTLRMDS--LSAFMVL 86 L I LS ++G + G T +AG+ A F F A L++ +S +S F Sbjct: 610 LHIPLSVTIMIIGAAVVFFFGKTSKNAGI-----LAASFSFLAFLSVLRNSFGISEFFAA 664 Query: 87 VISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVM--DNAFWFIVLFEMM 144 ++ + V+ LY+ YM FF N I + + V D+ + +E+M Sbjct: 665 LVLFMAVLNFLYAARYMDH----SHKPYRFFANFMIMIIGIIGVSLSDSIYSMFFYWEIM 720 Query: 145 SLSSWFLVIA---RQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRTLS 201 W L IA +D SI Y AG+ +IMI ++ D F + Sbjct: 721 G--GWALYIALVHEEDSYSITEASKYLIYNFAGAGVIMIGLSIVMHYGSYFD--VFEMMP 776 Query: 202 LSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPA-APSHASALMSGVMVKIGIFGILK 260 L+ AV LL GF AKA P+ + HP AP+ S +S VM+K G F + Sbjct: 777 LTSYTIFAVALLTV-GFLAKAAQFPVRIDY-QMHPKPAPTPISGYISSVMLKTGPF--ML 832 Query: 261 VAMDLLAQTGLPLWWGILVMAI-------GAISALLGVLYALAEQDIKRLLAWSTVENVG 313 + M L G+ L + + +I G I+ ++G + L +KRLL + TV +G Sbjct: 833 IMMFYLIAAGMSLTKMLAIDSIAHFAAVVGVITIIMGASFGLLTNSMKRLLIFLTVAEIG 892 Query: 314 IILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEK 373 I+ V L+T GL G + HL+NH FK LLFL AGAI + ++K Sbjct: 893 YIVAGV-----------SLVTSEGLAGGMLHLINHMFFKDLLFLSAGAIFYKTGIDSLDK 941 Query: 374 MGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAM 433 +G +A++MP T A ++ A + +P +GF+S+W + AL G + + Sbjct: 942 LGGIARKMPITFAVFMVAVFATAGVPMFSGFVSKWMIYH-----------ALMAKGYVFL 990 Query: 434 VMLAVTGGLAV-MCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIAL 490 +L + G + + + FVK + G + E+ ++V M V M++LA L +++ + Sbjct: 991 AILTILGSVMILLVFVKFMHSAYFGKMDKSF-EKIEKVDLFMSVPMIILAVLNIILGI 1047 >UniRef50_C0GJ41 NADH dehydrogenase (Quinone) n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJ41_9FIRM Length = 794 Score = 172 bits (437), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 136/423 (32%), Positives = 214/423 (50%), Gaps = 40/423 (9%) Query: 66 PPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASM 125 P F L R+D ++ S + + + YS YMR +E F + ++ Sbjct: 160 PEFMGLGLLFRVDFFGFVFAVMASFIWFLATFYSGEYMR-HEHASTRYYVFLLLSLGGTL 218 Query: 126 VALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLM 185 L D F+ FE M+L S+ LV+ Q + ++ AG Y ++ G + +++A +++ Sbjct: 219 GVFLAGDFLSLFL-FFEAMTLFSYVLVVHAQSEEAMAAGRNYLYMGIFGGLCLLVAIMMV 277 Query: 186 GRESGSLDFASFRTLSLSPGLASAVFL---------LAFFGFGAKAGMMPLHSWLPRAHP 236 +G T +++PGL S + L F GFG KAG PLH WLP+AHP Sbjct: 278 TMHAG--------TTAIAPGLESLADMGTMGYVAAALFFIGFGIKAGAAPLHIWLPQAHP 329 Query: 237 AAPSHASALMSGVMVKIGIFGILKVAMDLL--AQTGLPLWW-----GILVMAIGAISALL 289 AP+ ASAL+SG+M+K G +GI++V L AQ PLW+ G ++ G ++ Sbjct: 330 VAPTPASALLSGIMIKTGAYGIIRVFTLLYTPAQGESPLWYTTEQFGYALIWFGMVTMFT 389 Query: 290 GVLYALAEQDIKRLLAWSTVENVGIILLAVG-VAMVGLSLHDPLLTVVGLLGALFHLLNH 348 + AL ++ KR+LA+S+V +G IL+ +G A +G +G G +H+LNH Sbjct: 390 AAVLALVQRHAKRVLAYSSVSQMGYILMGIGAAAYLGFD------GAIGFAGWAYHILNH 443 Query: 349 ALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEW 408 A FK +FL GAI R H+ D K+G L +R P TAAA L+ AI+ +P NG++S Sbjct: 444 AFFKSAMFLMVGAIYLRTHSLDYSKVGGLWRRFPVTAAAFLVAGAAIAGVPGFNGYVS-- 501 Query: 409 YTWQSLFSLSRVEAVALQLAGPI--AMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEE 466 ++L + V+A Q + A + +TGGL V +++ F G R + Sbjct: 502 ---KTLLHHAIVDAWQAQGVTSLWYAEKIFTITGGLTVCYIARLFYSLFLGPARDGTHKY 558 Query: 467 AQE 469 A+E Sbjct: 559 ARE 561 >UniRef50_B6YTY8 Membrane bound hydrogenase, MbhH subunit n=9 Tax=Thermococcaceae RepID=B6YTY8_THEON Length = 532 Score = 172 bits (435), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 122/373 (32%), Positives = 198/373 (53%), Gaps = 35/373 (9%) Query: 67 PF-EFADLTLRM----DSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIF 121 PF + D +R+ D A MV +++ + ++ +YS+ YM+ G ++ I Sbjct: 70 PFGQGVDFPIRIVWEVDLFGAIMVFIVAFVSLMAVIYSIGYMKHDTGLDK----YYTLIL 125 Query: 122 IAS--MVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDK-TSINAGMLYFFIAHAGSVLI 178 I M+ + + + F F V E+MS++S+ LV R D I AG+ Y F+ S + Sbjct: 126 ILELGMLGIAITGDLFNFYVFLEIMSIASYALVAFRNDTWEGIEAGIKYMFVGSIASAFV 185 Query: 179 MIAFLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFF--GFGAKAGMMPLHSWLPRAHP 236 ++ L+ + G+L + +A LA F G K+G P+H WL AHP Sbjct: 186 LLGIALLYGQYGTLTMGYLAVKIVQNPTVTAKVALALFIAGLLFKSGASPVHMWLADAHP 245 Query: 237 AAPSHASALMSGVMVKIG-IFGILKV--------AMDLLAQTGLP-------LWWGILVM 280 AAPS SA++SG+++KIG I+ I ++ A ++ + L + W I++ Sbjct: 246 AAPSSISAMLSGLVIKIGGIYAIARILFSIYTPMAHSIVLEAYLQPHINMSAIGWIIIIF 305 Query: 281 AIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLG 340 A ++ ++G A+ + D+KRLLA+S+V +G ILL +G+++ + L G Sbjct: 306 A--CLTLIIGNAMAVIQTDMKRLLAYSSVGQIGYILLGLGISIAAYGTQT---GEIALAG 360 Query: 341 ALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPP 400 A++H +NHAL K LLFL AG +I +L T ++ ++ LAK MP T A LIG AI +PP Sbjct: 361 AIYHTVNHALMKALLFLVAGVVIHQLGTRNLNELSGLAKTMPKTTFAFLIGAAAIVGMPP 420 Query: 401 LNGFISEWYTWQS 413 LNGF S+W ++S Sbjct: 421 LNGFASKWLIYES 433 >UniRef50_B6YTX9 Hydrogenase 4, component F or formate hydrogen lyase, subunit 3 n=3 Tax=Thermococcus RepID=B6YTX9_THEON Length = 522 Score = 172 bits (435), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 127/446 (28%), Positives = 232/446 (52%), Gaps = 59/446 (13%) Query: 76 RMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFI---ASMVALLVMD 132 +D +SA LV + L+ + ++YS Y+ EG + ++ +++ A ++ +L+ Sbjct: 77 EVDRMSALFALVTAALMFLIAIYSYRYLEHEEG-----LEWYYTLYLGLEAGLLGVLLTG 131 Query: 133 NAFWFIVLFEMMSLSSWFLVIARQDK-TSINAGMLYFFIAHAGSVLIMIAFLLMGRESGS 191 +AF V+ E+ S++++ LV+ +D+ SI AG+ Y FI G+ + +A + G+ Sbjct: 132 DAFNLFVMIEVTSIAAYALVMFYRDRGDSICAGLKYAFIGALGTTMYFLALGTLYGAFGT 191 Query: 192 LDFA----------------SFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAH 235 L+ A ++ ++++ G+A A LA + F KA ++P H WLP AH Sbjct: 192 LNMANLSALIHGLSFPIAGTTYGNIAIASGVALA---LATWAFLIKAAIVPNHFWLPEAH 248 Query: 236 PAAPSHASALMSGVMVKIGIFGILKVAMDLLAQT------GLPLWWGILVMAIGAISALL 289 PAAPS SA++SG++V +G++ +++ + G+ ++++ +GA+SAL Sbjct: 249 PAAPSPISAILSGLVVNVGVYSLIRFLYTVYGGEVSGSLGGVIHALSVILIVLGAVSALF 308 Query: 290 GVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHA 349 G L A++D+K+L+A+ST+ ++G + +AVGV T + L A FH++NHA Sbjct: 309 GALMMNAQRDVKKLIAYSTIMHMGYLAMAVGVG-----------TQLALQAAAFHIINHA 357 Query: 350 LFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWY 409 + K LLFL AGA I + + D+ + L ++MP I L++ IPP N F S+ Sbjct: 358 IAKALLFLAAGAFIHAVGSRDISDLAGLGRQMPVATFGLAIATLSLVGIPPFNVFFSKLL 417 Query: 410 TWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQE 469 + + S A+ L L+ IA+V +V+++ + G PR Sbjct: 418 LFNAFMEESPALALVLVLSSVIALV-----------AYVRVFQEIWLGKPRENTTIREH- 465 Query: 470 VPNTMIVAMLLLAALCVLIALSASWL 495 +M +L+LA +C+L+ L A ++ Sbjct: 466 --GSMSGVLLILAVICLLLGLFAPYI 489 >UniRef50_B1ZRS2 Proton-translocating NADH-quinone oxidoreductase, chain L n=3 Tax=Verrucomicrobia RepID=B1ZRS2_OPITP Length = 622 Score = 171 bits (434), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 136/424 (32%), Positives = 223/424 (52%), Gaps = 33/424 (7%) Query: 73 LTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMD 132 L + D L+A M+ V+ ++ ++S YMRE K G ++IF+ SM+ + V D Sbjct: 73 LGFKFDDLAALMLFVVGVVGFFIHVFSFGYMREDTAKARYFGG--LSIFMFSMIGITVAD 130 Query: 133 NAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAH-AGSVLIMIAFLLMGRESGS 191 N F V +E++ SSW L+ ++ S +A FI + G ++ + G+ Sbjct: 131 NLFMMFVFWELVGFSSWLLIGHWHERPSASAAAKKAFIVNRVGDFGFLLGIAMCYWVHGT 190 Query: 192 LDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALM-SGVM 250 + + + P + + + LL F G K+ MPL WLP A P+ SAL+ + M Sbjct: 191 VTLSELD--GVQP-VGALLPLLLFCGAVGKSAQMPLQVWLPDAMEG-PTPVSALIHAATM 246 Query: 251 VKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVE 310 V GI+ + ++ + ++ + + W +G +AL L A+ + DIK++LA+ST+ Sbjct: 247 VAAGIYMLCRINVLMVPEALTVIMW------VGTATALYAALCAIVQSDIKKVLAYSTLS 300 Query: 311 NVGIILLAVGVA------MVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIIS 364 +G ++ A G+ +G ++H+ ++ G+ A+FHL+ HA FK LLFLG+G++I Sbjct: 301 QLGYMVAAFGLGSLAERHEMGGAVHE-IVIAAGVGAAMFHLVTHAFFKALLFLGSGSVIH 359 Query: 365 RLH-THDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAV 423 H D+ KMG L KRMP T A IG LAI +P L GF S+ ++ L+ + Sbjct: 360 GCHHEQDIFKMGGLVKRMPVTFATFTIGVLAIIGMPGLAGFFSK----DAILLLAYQKNA 415 Query: 424 ALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAA 483 A+ V+LA T L V+++ ITF GAPRS HAE A E + + + +++LAA Sbjct: 416 AV-------FVVLAFTAILTACYMVRVWKITFFGAPRSEHAEHAHESGSVLTMPLIVLAA 468 Query: 484 LCVL 487 L +L Sbjct: 469 LAIL 472 >UniRef50_Q2RXM0 NADH dehydrogenase (Quinone) n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RXM0_RHORT Length = 531 Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 116/352 (32%), Positives = 189/352 (53%), Gaps = 32/352 (9%) Query: 78 DSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMG-----FFMN-IFIASMVALLVM 131 D+LSA + +V++ + + +L+S+ Y+R G + F +N +FIA+M A+ V Sbjct: 70 DALSAVVAIVVTFVGLAATLFSIGYLRHEVEAGQYSQTRLPVYFVLNSVFIATMAAVTVT 129 Query: 132 DNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAG--------SVLIMIAFL 183 +N V+ E +L+S LV + + AG Y + G +L A Sbjct: 130 NNVIMMYVVVEATTLASALLVTYYRKPGAWEAGYKYLLLCSVGITMGLLGCVILYSAAVP 189 Query: 184 LMGRESGSLDFASFRTLS--LSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSH 241 L+G ++ + T++ L P +L GFG+KAG++P H+WLP AH +PS Sbjct: 190 LLGGHR-AMQISELATVADQLPPTAVVVGCVLIIIGFGSKAGLIPFHAWLPDAHSQSPSP 248 Query: 242 ASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIK 301 SAL+SGV +K+ I+ I ++A A G G+ + +GAI+ L G++ A ++ D+K Sbjct: 249 VSALLSGVTLKVAIYAIARIASLFYAGHGA---LGVFCIVLGAITMLGGIIAAFSQTDLK 305 Query: 302 RLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGA 361 RLLA+S+V VG I++ +G+ + +G GA++HL+NHAL K +LFL G Sbjct: 306 RLLAYSSVSQVGYIIMGLGIG-----------SYLGFYGAVYHLMNHALDKAMLFLCTGL 354 Query: 362 IISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQS 413 ++ T +E++G K P A IG LAIS +PPLNGF S++ + + Sbjct: 355 LLYSCGTTSIEELGK-RKHSPLVALCFFIGALAISGVPPLNGFWSKFAIYTA 405 >UniRef50_C6A3Z7 Membrane-bound hydrogenase MBH 2, subunit Mbh2H (Hydrogenase subunit) n=2 Tax=Euryarchaeota RepID=C6A3Z7_THESM Length = 517 Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 123/436 (28%), Positives = 230/436 (52%), Gaps = 25/436 (5%) Query: 75 LRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNA 134 +D++ AFM + +L+ + ++YS +++++ G + + A ++ +++ + Sbjct: 83 FEVDAMGAFMAISATLMSFIGAIYSYSHVKK--DTGLEKYYALLMLLEAGILGMVLTGDL 140 Query: 135 FWFIVLFEMMSLSSWFLVIARQDK-TSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLD 193 F V E+ ++ LV R + + AG+ Y ++ S++++ A ++ + G+L+ Sbjct: 141 FNLFVFLEIAGIAGSALVGFRNYRGEASEAGIKYLIVSAVASLMVLFAVSILYGQYGNLN 200 Query: 194 FASFRTLSLSPGLASAVFL-LAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVK 252 A + ++S + + L L F F K G +P+H W+P A+ P+ + + V Sbjct: 201 LA-YIAKNVSFNMVDMIALGLLFTSFAMKCGAVPMHYWVPDAYTEVPAGINPPLL-VATY 258 Query: 253 IGIFGILKVAMDLLAQTGLPLWWGILVMAI-GAISALLGVLYALAEQDIKRLLAWSTVEN 311 ++ + +V+ L A + L +M+I G ++ +GV AL ++D+KRL++ + Sbjct: 259 ASLYALFRVSFTLFANVVIDLARVGWIMSILGVLTMFIGVTMALIQKDVKRLMSHHAISQ 318 Query: 312 VGIILLAVGVAMVGLSLHDP-LLTVVG---LLGALFHLLNHALFKGLLFLGAGAIISRLH 367 G +LL VGV + LHDP L G + G +FH++N+ ++K LL + AGA+ Sbjct: 319 TGYMLLGVGVGLT--VLHDPSKLAEFGRDAMAGGVFHIINNIIYKSLLLMTAGALFYVTG 376 Query: 368 THDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQL 427 T ++ +MG LA++MP T + ++G AIS +PP NGF S++ +++ + L+ Sbjct: 377 TRNLNEMGGLARKMPITTISFMVGAAAISGLPPFNGFASKFLIYETSYRLN--------- 427 Query: 428 AGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVL 487 P+ V VT L + FVK++ F G P E +EVP MIVAML+LAALC+L Sbjct: 428 --PLLTVFAMVTSVLTLASFVKVFASAFLGPPLEKF-ENKREVPKPMIVAMLILAALCIL 484 Query: 488 IALSASWLAPKIMHIA 503 L + + K+++ A Sbjct: 485 FGLFPNVVLDKLVYPA 500 >UniRef50_Q0W2B8 Hydrogenase, membrane subunit 1-like protein (EchA-like) n=2 Tax=cellular organisms RepID=Q0W2B8_UNCMA Length = 487 Score = 169 bits (427), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 112/347 (32%), Positives = 187/347 (53%), Gaps = 28/347 (8%) Query: 77 MDSLSAFMVLVISLLVVVCSLYSLTYM-REYEGK----GAAAMGF-FMNIFIASMVALLV 130 +DSL A+M+++IS + + ++YS+ Y+ EY+ K G F F ++FI +M+ + Sbjct: 61 VDSLGAYMLVIISFIGLAAAIYSIGYLGYEYKEKKIDLGRLRYYFTFFHVFIFTMLLVCT 120 Query: 131 MDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLM----- 185 N + E +L+S FLV TS+ A Y I G L ++ +L+ Sbjct: 121 SSNLGIMWIAIEATTLASAFLVGFYNKDTSVEAAWKYIIICSVGITLALLGTILLYASSV 180 Query: 186 ---GRESGSLDFA--SFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPS 240 G + +L++ + + SL P L F+L G+G KAG P+H+WLP AH AP+ Sbjct: 181 NTLGESADALNWPMLAEKAKSLDPTLLKIAFILVIIGYGTKAGFAPMHTWLPDAHSEAPT 240 Query: 241 HASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDI 300 S L+SGV++ ++GIL+ + G P + G L++ G +S + + ++D Sbjct: 241 PISGLLSGVLLNCAMYGILRYHIITTNALG-PDFSGTLLIVFGLLSLAAAAAFIIIQKDY 299 Query: 301 KRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAG 360 KRLLA+S++E+ M +++ + VG+ GAL H+LNHA+ K L+F GAG Sbjct: 300 KRLLAYSSIEH-----------MGIIAIGFGIGGAVGIFGALLHILNHAVTKSLMFFGAG 348 Query: 361 AIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISE 407 I+ + T +++++ +A MPWTA + G LAI+ PP + F+SE Sbjct: 349 NILLKFKTKNIDEVKGIAALMPWTAMCFVAGALAITGSPPFSIFVSE 395 >UniRef50_A6TVL5 NADH dehydrogenase (Quinone) n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TVL5_ALKMQ Length = 498 Score = 168 bits (426), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 128/433 (29%), Positives = 221/433 (51%), Gaps = 51/433 (11%) Query: 77 MDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIA--SMVALLVMDNA 134 +D SA M LV+ + + +YSL + E+E ++ IF+ SM+ ++ ++ Sbjct: 77 VDEFSALMTLVVLSVATLIIIYSLKDI-EHEILKEQFFSYYTLIFLLLFSMIGMIFTNDL 135 Query: 135 FWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDF 194 F V E++SL+S ++ ++ K ++ A Y + GSV I++ L+ +G L+ Sbjct: 136 FNLYVFMEILSLTSCGIISIKRKKENLMASFKYLMLGAIGSVSILMGIALLYMVTGHLNM 195 Query: 195 -ASFRTLSL------SPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMS 247 A++ ++ L + F+L GFG KA + PLH WLP AH AP+ +SAL+S Sbjct: 196 TAAYEVITQVWQSYPRNILIALGFILT--GFGIKAAIFPLHIWLPDAHSNAPTPSSALLS 253 Query: 248 GVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGA---------ISALLGVLYALAEQ 298 G++VK+ +F I K+ +L Q +V +IG +S ++G ++A+ + Sbjct: 254 GLVVKVYVFAIAKILFRVLGQD--------IVQSIGVTEFITYFAVLSMIMGSVFAIGQT 305 Query: 299 DIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLG 358 DIKRLLA+S+V +G I L +G+A T +G LFH++ HAL K LFL Sbjct: 306 DIKRLLAYSSVAQIGYIFLGLGLA-----------TELGFSAGLFHVITHALMKSALFLS 354 Query: 359 AGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLS 418 AGAII + D+ + + +MP T + L + IP LNGF+S+WY SL+ Sbjct: 355 AGAIIYQTGKRDIRDLDGIGYQMPITMGVFSVAALGMIGIPGLNGFMSKWY-----LSLA 409 Query: 419 RVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCG-APRSTHAEEAQEVPNTMIVA 477 +EA P+ ++M+ ++ L + ++ + F + + +P TM+ Sbjct: 410 VLEA-----DKPVFLIMILISSFLNAIYYLPIIIAAFLKESNERDNVMVLDRLPKTMMYP 464 Query: 478 MLLLAALCVLIAL 490 M+++A CV++ Sbjct: 465 MVIIAIGCVVMGF 477 >UniRef50_A9A3Z6 Proton-translocating NADH-quinone oxidoreductase, chain M n=4 Tax=Thaumarchaeota RepID=A9A3Z6_NITMS Length = 517 Score = 168 bits (426), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 125/457 (27%), Positives = 220/457 (48%), Gaps = 57/457 (12%) Query: 69 EFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYM-----REYEGKG------------- 110 +F + +D L++ ++I +L + LYS YM ++E + Sbjct: 64 QFGEFGFLLDGLASPFAIIIYVLSTILVLYSKPYMIHKFHEQFEEEQKINPSSSGQSSVV 123 Query: 111 -AAAMGFFMN-----------IFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDK 158 ++A+ ++N +F M+ ++ N F + FE+M + +FLV D Sbjct: 124 ESSALSNYVNAKSGLYFALYLVFAMGMLGTVMSTNLIEFYIFFEVMLIPGFFLVALWGDG 183 Query: 159 TSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGF 218 G+++ F HAG+V++++ FL++G GS DFA + + + + G Sbjct: 184 PRRKIGLMFLFWTHAGAVVLLLGFLMIGLTIGSFDFADIKESEIPQDVVMISAIAIAIGL 243 Query: 219 GAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQT--GLPLW-- 274 G K + H WLP H +AP+ SAL+S M+ IG +G+ ++ ++ L T L +W Sbjct: 244 GVKLAVFMFHVWLPYVHGSAPTPISALLSPAMIGIGAYGVFRLIVEFLPSTFAELSIWFH 303 Query: 275 -WGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLL 333 WG++ M G AL+ + D+KRLLA+S++ +G +L +G + Sbjct: 304 IWGLVTMLYGGAMALM-------QDDLKRLLAYSSISQMGYLLFGIGS-----------M 345 Query: 334 TVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCL 393 + +GL GA + H L KG+LF+ AG II ++ T + K+G LA +MP TA +IG L Sbjct: 346 SAMGLAGAEMMYITHGLGKGILFMMAGIIIVKVGTRSISKLGGLAGKMPITAVCAVIGAL 405 Query: 394 AISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGI 453 I +PP +GF+ EW + + E L+ A + ++A +A M ++ + + Sbjct: 406 TIMGVPPTSGFMGEWILFYGALETAIEEGSTLR-AVTFGLGLVATALTMAYMLWM-LKRV 463 Query: 454 TFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIAL 490 F P H E+ +E M M++LA V++ + Sbjct: 464 FFGKTPE--HLEKVKEGSWYMTAPMMVLAGFTVVLGI 498 >UniRef50_C1TPN6 Formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit n=2 Tax=Synergistaceae RepID=C1TPN6_9BACT Length = 521 Score = 167 bits (424), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 125/439 (28%), Positives = 229/439 (52%), Gaps = 28/439 (6%) Query: 73 LTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMD 132 + L +DS ++F+ ++ + L+ L ++ + GK + +F+ A M+ L++ Sbjct: 84 IILEVDSFNSFIAVIGCFASLAGVLFGLRFLDRFSGKVWYSSLYFL--LTAGMLGLILTG 141 Query: 133 NAFWFIVLFEMMSLSSWFLVIARQDK-TSINAGMLYFFIAHAGSVLIMIAFLLMGRESGS 191 + F F V E+ S+SS+ L+ +D+ SI A Y ++ ++++++A + Sbjct: 142 DLFNFFVFLEIASVSSFGLIAYWRDRPESIEASFKYMLVSQVAAMMVLLAIGFLYGRYNL 201 Query: 192 LDFASFRTLSLSPGLASAVFLLAFF-GFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVM 250 L+ A+ + + GLA V L+ K G P+H W+P A+ AP+ + L+ V+ Sbjct: 202 LNMAAVGKV-IQFGLAEKVALVFMITALAMKCGAFPMHMWMPDAYAEAPASVTVLLV-VV 259 Query: 251 VKIGIFGILKVAMDLL--AQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWST 308 + + G+ ++ + A G + W ++ + G IS GV A+ + ++KRL+ + + Sbjct: 260 SQASLVGLCRIVFSVFGSAIVGDVVPWALITL--GMISMFFGVSMAVVQHEVKRLMGYHS 317 Query: 309 VENVGIILLAVGVAMVGLSLHDPL----LTVVGLLGALFHLLNHALFKGLLFLGAGAIIS 364 V VG +L+A GV + L++ DP + + G +FH++N+ +KGLLFL AGA+ Sbjct: 318 VSQVGYMLMAFGVGL--LAMGDPRQMADFGMTSMKGGIFHMVNYVTYKGLLFLVAGALYY 375 Query: 365 RLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVA 424 T D++KMG LAKRMP+T +I AIS IPP NGF+S+ ++S F++ Sbjct: 376 VTGTRDLDKMGGLAKRMPFTTFMFVIAAAAISGIPPFNGFVSKLLIYESSFAVH------ 429 Query: 425 LQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAAL 484 P V+ VT L + FVK++ F G P + +EVP +M++ M +L + Sbjct: 430 -----PALSVVALVTSILTLASFVKVFQTAFLG-PEKKEFSKVKEVPASMVLGMAVLTVV 483 Query: 485 CVLIALSASWLAPKIMHIA 503 + ++L +W+ ++ A Sbjct: 484 ILGLSLFPTWVVSHLVEPA 502 >UniRef50_B9DJY9 Putative NADH dehydrogenase I chain L n=1 Tax=Staphylococcus carnosus subsp. carnosus TM300 RepID=B9DJY9_STACT Length = 824 Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 133/441 (30%), Positives = 221/441 (50%), Gaps = 28/441 (6%) Query: 72 DLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVM 131 D R+D LS L+I+L+ LY+ Y+ + E F++ +F+ +M+ +++ Sbjct: 96 DFAFRLDGLSMIFALLITLIGTGVVLYANAYLSK-EHDDLPRFYFYLILFMFAMLGVVLA 154 Query: 132 DNAFWFIVLFEMMSLSSWFLVIAR--QDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRES 189 DN V +E+ S++S FL+I+ K S N + F I G + ++I F+++ S Sbjct: 155 DNTILLYVFWELTSIAS-FLLISYWYNRKASQNGALKSFLITVFGGMFMLIGFIIIYSIS 213 Query: 190 GSLDFASF----RTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASAL 245 G+ + TL SP AV + F K+ P H WLP A A ++ L Sbjct: 214 GTNTISELVTQTDTLRSSPWFPFAVVCILIGAF-TKSAQFPFHIWLPDAMEAPTPVSAYL 272 Query: 246 MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLA 305 S MVK G++ + + L + W G +V+ +G I+ +G A+ ++D+K LLA Sbjct: 273 HSATMVKAGLYLLFRFTPILSYAS----WVGYIVITVGIITLAVGSFVAVGQRDLKALLA 328 Query: 306 WSTVENVGIILLAVGVAMVGLSLHDPLLT--VVGLLGALFHLLNHALFKGLLFLGAGAII 363 +ST+ +G+I+ VG M+ SLH + V+ L LFHL+NHALFK +LF+GAG I Sbjct: 329 YSTISQLGMIMSMVGFGMLTYSLHKSFVEFFVISLFAGLFHLINHALFKSVLFMGAGIID 388 Query: 364 SRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAV 423 T ++ +G L K +P TA I +A++ +P NGF+S + +F + V Sbjct: 389 HETGTRNLADLGGLRKLLPVTATIMTISAMAMAGLPFFNGFLS-----KEMFFTTLVNGR 443 Query: 424 ALQLAGPIAM-VMLAVTGGLAVMCFV---KMYGITFCGAPRSTHAEEAQEVPNTMIVAML 479 L + I M +ML + G +V+ FV +M TF G + E+ VP + M Sbjct: 444 KLPIDDQIFMSIMLIIAIGASVLTFVYSLRMIKDTFFGP---LNKEKLPHVPGHEPIGM- 499 Query: 480 LLAALCVLIALSASWLAPKIM 500 +A + ++ L ++ P I+ Sbjct: 500 YIAPVIIVCGLPLFFIIPNIL 520 >UniRef50_A1AUV4 NADH dehydrogenase (Quinone) n=2 Tax=Pelobacter propionicus DSM 2379 RepID=A1AUV4_PELPD Length = 480 Score = 165 bits (418), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 124/413 (30%), Positives = 208/413 (50%), Gaps = 44/413 (10%) Query: 67 PFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMV 126 PF + DSL+ FM +V L+ V LYS+ Y+ Y+ + F + +F+ SM+ Sbjct: 65 PFLGGNNLFLADSLAVFMAIVSMLVGAVIVLYSMGYISHYDNQNEYY--FMVVLFLGSMM 122 Query: 127 ALLVMDNAFWFIVLFEMMSLSSWFLV--------IARQDKTSINAGMLYFFIAHAGSVLI 178 ++ N + +E+ +++ W L+ + R DK F + G+ ++ Sbjct: 123 GIVYSANLILIYLFWEITAIACWRLIGFFREPLCVVRADKA--------FLMTGFGAFVM 174 Query: 179 MIAFLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAA 238 +I F+++ + GS D ++ S + +A+ LL FG +K+ PLH+WLP A A Sbjct: 175 LIGFIMIHGQYGSFDLQVIKSASAANPVANLAVLLILFGILSKSATFPLHTWLPDAG-VA 233 Query: 239 PSHASALM-SGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAE 297 P+ +AL+ + V+VKIG++ A +A + W +V I ISAL+ AL E Sbjct: 234 PTPVTALLHAAVLVKIGVY---VYARLFVASFTVDPAWNSVVPMIAGISALVSGGAALIE 290 Query: 298 QDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFL 357 D+KR++A+STV +G ILL GLS+ +PL G G L ++L H++ KG +FL Sbjct: 291 TDMKRIIAYSTVSQLGFILL-------GLSIGNPL----GFAGGLLYILMHSIAKGGIFL 339 Query: 358 GAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSL 417 AG + +LH D+ K+G L K MP TA + L+ ++ IPP GF S++ Sbjct: 340 CAGVVEQKLHVKDITKLGGLIKTMPVTAVSFLLCSFSVMGIPPFGGFFSKY--------- 390 Query: 418 SRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEV 470 V A A++ + + + L V+ +++ + F G P++T E V Sbjct: 391 -MVIAGAIRSGDYLLTTIFILGAFLTVIYLFRIFAMIFLGEPKTTPVAEGAPV 442 >UniRef50_C0GDB1 NADH dehydrogenase (Quinone) n=2 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GDB1_9FIRM Length = 782 Score = 165 bits (417), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 142/513 (27%), Positives = 251/513 (48%), Gaps = 33/513 (6%) Query: 20 ASLFLLGLDRLAIKLSGITSLVGGVI--GIISGITQLHAGVTLVARFAPPFEFADLTLRM 77 SL + R + KL I +++ +I GI+ + L L FA F + R+ Sbjct: 31 GSLLVFFAGRFSEKLRDICAVITALITFGIVFSMYPLVQQAVLQYEFAK-FLQVSIHFRV 89 Query: 78 DSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWF 137 D ++S + + +LYS+ YM G+ F+ + + ++++ + F Sbjct: 90 DFFGFVFAALMSCIWFLATLYSIAYMEH--GRAKNRYYVFLLSTLGHCLGVVLVGDLFSL 147 Query: 138 IVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLD---- 193 + FE+M+ SS+ LVI + ++ G + ++ G + +++A L+ G+++ Sbjct: 148 FLFFELMTFSSYVLVIHEETPDAMAGGAVTLYLGVFGGLCLLMAIFLLYFNVGTMEIIPL 207 Query: 194 FASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKI 253 + +++P +FL+ GFG KAGM+PLH WLP+AHP AP+ ASAL+SG+M+K Sbjct: 208 YEQIAASAINPYTVVTLFLV---GFGIKAGMVPLHIWLPKAHPVAPAPASALLSGLMIKA 264 Query: 254 GIFGILKV-----AMDLLAQTGLP----LWWGILVMAIGAISALLGVLYALAEQDIKRLL 304 G +GI +V ++ +P + +G ++ +G I+ LG AL K++L Sbjct: 265 GAYGIFRVVGMIFTPSEFSEVAVPSIVSVNFGYAIIWMGIITMFLGAFMALLSTGAKKIL 324 Query: 305 AWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIIS 364 A+S+V +G ILL VG A L P+ G GAL+H++NHA FK LF+ G+I Sbjct: 325 AYSSVSQMGYILLGVGTAAY-LGFAGPM----GFAGALYHIINHAFFKAGLFMMVGSIYM 379 Query: 365 RLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVA 424 H D+ ++ +AK++P+ A LIG I IP NG+ S +++ + V+A Sbjct: 380 ITHNLDITQVRGMAKKVPFIAVTFLIGYAGIGGIPGFNGYGS-----KTILHHAIVDAAN 434 Query: 425 LQLAGP--IAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLA 482 L + P +A + VT + + F K++ F G + +++ + + Sbjct: 435 LHGSVPLHVAEKIFVVTSAMTLCYFAKLFRGLFLGDVPEKYDKKSYNFTWPVYAVLGTFG 494 Query: 483 ALCVLIALSASWLAPKIMHIAHAFTNTPPATVA 515 A+ + I L +L +++ A A P VA Sbjct: 495 AIIIAIGLFPHFLLNRMVIPAMAGFTYDPYKVA 527 >UniRef50_C5CEV1 NADH/Ubiquinone/plastoquinone (Complex I) n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CEV1_KOSOT Length = 492 Score = 165 bits (417), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 122/420 (29%), Positives = 215/420 (51%), Gaps = 33/420 (7%) Query: 73 LTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGK-GAAAMGFFMNIFIASMVALLVM 131 ++ +D LSAF+V ++S L V+ ++YS+ YMR++ G A+ + + I + + + Sbjct: 70 ISFVIDYLSAFLVTMVSALAVLSTIYSVGYMRKFSGIWNYYAL---LMLMITGLNGVAIT 126 Query: 132 DNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGS 191 + F V E+ ++++ LV + A Y ++ S L++ + + S Sbjct: 127 GDLFNLFVFMEIALIATYALVAFHGEAEHYEAAFKYAIMSSLSSSLVLFGIGCVYSMTSS 186 Query: 192 LDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMV 251 L + G + V+ L GFG KA M P HSWLP AHP+APS SA++SGV++ Sbjct: 187 LTLMQISNKMIGVGETNLVYALFLTGFGLKAAMFPFHSWLPDAHPSAPSPVSAMLSGVLI 246 Query: 252 KI-GIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVE 310 K+ G + +++V + + L L + G +S ++G L A+ ++DIKR+L +S+V Sbjct: 247 KVLGAYTLIRVFYMVFGVSELVKE---LFLIFGTLSMVIGALVAVMQKDIKRMLGFSSVS 303 Query: 311 NVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHD 370 +G I+ A+G+ T +G+LGA++H+LNHA+ KGLLF+ AGA+ T D Sbjct: 304 QMGYIIFALGIG-----------TPLGVLGAIYHMLNHAVLKGLLFMDAGAVELIEGTRD 352 Query: 371 MEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGP 430 ME+M ++ R + + L+ L IS +PP GF S+ + + + LA Sbjct: 353 MEEMKGVSDRTTYVTS--LMASLGISGVPPFGGFFSKLIIITAAIYTGKFIYAIIALA-- 408 Query: 431 IAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIAL 490 ++++ L G+ F K R+ + +P ++ + M++LA L + AL Sbjct: 409 VSVITLGYYLGMLKKAFRK----------RNKEVNDKGSLPASLKIPMIILAVLTLATAL 458 >UniRef50_C4V3R7 NADH dehydrogenase (Quinone) n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V3R7_9FIRM Length = 634 Score = 164 bits (414), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 137/423 (32%), Positives = 208/423 (49%), Gaps = 43/423 (10%) Query: 77 MDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFW 136 +D L+A M+++++L+ ++ +YS++YM EG G F+++F A+M+ L+V N Sbjct: 87 IDPLTALMLVIVTLVSLLVYIYSVSYMEHDEGMGRFFA--FISLFSAAMLGLVVSVNFLQ 144 Query: 137 FIVLFEMMSLSSWFLVIARQDKTSI-NAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFA 195 V +E + L S+ L+ DK S A F G +++ LL+ G++DF Sbjct: 145 LYVFWEGVGLCSYLLIGFYYDKVSAREAAKKAFITTRIGDFGMLVGILLVQVSFGTMDFI 204 Query: 196 SFR------TLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALM-SG 248 R L G + + LL F G K+G PLH WL A P+ SAL+ + Sbjct: 205 ELRLMMPAYVLVAGTGYLTVIGLLLFMGPIGKSGQFPLHVWLLDAMEG-PTPTSALIHAA 263 Query: 249 VMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWST 308 MV G+F VA + PL + +GA +AL + A+ ++ K +LA+ST Sbjct: 264 TMVAAGVF---LVARAFFIFSECPLVMN-FIAGLGAFTALFAAVIAVTQRRFKAVLAYST 319 Query: 309 VENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHT 368 + +G ++LAVG+ S+ FHL+ HA FK +LFL AGA++ LH Sbjct: 320 ISQLGYMMLAVGIGAFSASM--------------FHLMTHAFFKAMLFLCAGAVMHALHD 365 Query: 369 H-DMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQL 427 D+ KMG L K+MP T LIG LAIS IPP +GF FS + A A+ Sbjct: 366 ETDITKMGGLWKKMPLTFVTMLIGVLAISGIPPFSGF----------FSKDEILAAAMHA 415 Query: 428 AGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVL 487 + P+ + M T L ++ + F G RS H EA EV M M++LA L ++ Sbjct: 416 STPLYL-MATFTSFLTAFYMARLLIVAFLGESRSEH--EAHEVDAFMRWPMIMLALLTIV 472 Query: 488 IAL 490 L Sbjct: 473 SGL 475 >UniRef50_C0GJ36 NADH dehydrogenase (Quinone) n=2 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJ36_9FIRM Length = 491 Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 137/436 (31%), Positives = 218/436 (50%), Gaps = 40/436 (9%) Query: 72 DLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVM 131 D+ R+D L+A + S+L V +LYS YM + + +I S+ A + + Sbjct: 72 DIVFRVDPLAAAFSTLASVLWVFAALYSTGYMAHEHNRRR-----YFTFYILSLGATMGI 126 Query: 132 D---NAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRE 188 N F + +E +++ ++ LVI + + AG Y + G+ LI+ A ++ Sbjct: 127 AFSANLFTLYLCYEFLTIFTYPLVIHAGNAEAQAAGKRYIIYSFLGAGLILSAIVMTAGA 186 Query: 189 SGSLDFASFRTLSLSPGLA---SAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASAL 245 G++ FAS L+++ G A +FL GFG KA +MPLH+WLP A AAP+ SAL Sbjct: 187 VGTITFASGGILTVADGPAHYLQLIFLCFILGFGVKAAIMPLHAWLPAAM-AAPTPVSAL 245 Query: 246 MSGV-MVKIGIFGILKVAMDLLAQTGL-PLWWGILVMAIGAISALLGVLYALAEQDIKRL 303 + V +VK GIFGIL+ + L L G+ V+ I +I+ + L AL + +KR Sbjct: 246 LHAVAVVKSGIFGILRAMYSVFGVETLGELSLGLFVVVIASITIVSASLIALRQDALKRR 305 Query: 304 LAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAII 363 LA+ST+ + I+L G LL+V G G + H++NHAL K LF AGAII Sbjct: 306 LAYSTISQLSYIILGAG-----------LLSVAGATGGMLHMINHALLKITLFFCAGAII 354 Query: 364 SRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAV 423 + + ++ + RMP T A +G + + I P+NGFIS+ Y Q SL Sbjct: 355 TVTGKKKISELNGVGVRMPLTMMAFTVGSIGMVGILPVNGFISKLYLLQG--SLD----- 407 Query: 424 ALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQ--EVPNTMIVAMLLL 481 AG +A++ + V A++ + + I R E A+ E P TM+V + +L Sbjct: 408 ----AGMLAVIAVLVVS--AILNALYFFPIVITAFFRQGAFERAKGPEAPLTMLVPVCVL 461 Query: 482 AALCVLIALSASWLAP 497 A +C+++ + P Sbjct: 462 AVICIVLGIKPDLTIP 477 >UniRef50_B2V8R3 NADH dehydrogenase (Quinone) n=1 Tax=Sulfurihydrogenibium sp. YO3AOP1 RepID=B2V8R3_SULSY Length = 484 Score = 162 bits (411), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 118/388 (30%), Positives = 202/388 (52%), Gaps = 34/388 (8%) Query: 50 GIT--QLHAGVTLVARFAPP----FEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYM 103 GIT L G +L+++ P +E L L +DSL++ ++LVI + S+YS+ YM Sbjct: 29 GITFINLILGYSLISKINNPQDRIYELNSL-LFLDSLNSILLLVILTISFFVSVYSVGYM 87 Query: 104 -REYEG----KGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDK 158 RE +G K F+MN+FI +M+ + + +N + E +L++ FL+ ++K Sbjct: 88 KRELKGGISEKKVNEYYFWMNLFIFAMLVVTLSNNFGILWIAIEGTTLATAFLISYYRNK 147 Query: 159 TSINAGMLYFFIAHAGS--------VLIMIAFLLMGRESGSLDFASFRTLS--LSPGLAS 208 ++ AG Y + G +L +F ++G SL++ + +S L+P L Sbjct: 148 EAVEAGWKYIMLCSIGIGLALFGIILLYYSSFSVLGHGLQSLNWTNIYDVSSRLNPKLLM 207 Query: 209 AVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQ 268 F+ GFG K G PLH WLP AH AP+ SALMSGV++ + IL+V ++ Sbjct: 208 LAFIFVLVGFGTKVGFAPLHFWLPDAHSQAPTPISALMSGVLLNCAFYSILRVQ-AIINN 266 Query: 269 TGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSL 328 G +M G ++ ++ L+ + + D KRLLA+S++E++ II A V Sbjct: 267 NGYGYNTSKYLMFFGVLTVVVSALFIIRQVDYKRLLAYSSMEHMAIIAFAFSVN------ 320 Query: 329 HDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAAC 388 T + + ++HL+NHA+ K +F+ G+I++ HT D+ + L K +P+T+ A Sbjct: 321 -----TKLSIFAGVYHLINHAIVKTSIFMTVGSILTSFHTRDIFSIRGLFKALPYTSIAL 375 Query: 389 LIGCLAISAIPPLNGFISEWYTWQSLFS 416 ++ AI+ PP + F+S+ + S F Sbjct: 376 ILSMFAITGTPPFSIFMSKLFILISSFK 403 >UniRef50_A1JTZ4 Hydrogenase-4 component F n=19 Tax=Bacteria RepID=A1JTZ4_YERE8 Length = 545 Score = 162 bits (411), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 118/351 (33%), Positives = 187/351 (53%), Gaps = 30/351 (8%) Query: 75 LRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAM-------GFFMNIFIASMVA 127 L +DSLSA + ++ ++ + LYSL YMR G + GFF ++F+ +M+ Sbjct: 70 LHIDSLSALFLAILGVIGFITGLYSLGYMRHEVNNGEITVSTLCNYYGFF-HLFLFTMLL 128 Query: 128 LLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGR 187 ++ +N V E +LSS FLV ++S+ A Y I G + +L+ Sbjct: 129 VVTSNNLILMWVGIEATTLSSAFLVGLYGQRSSLEAAWKYIIICTVGVAFGLYGTVLVYA 188 Query: 188 ESGSL----DFASFRTL------SLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPA 237 + ++ A F T+ L P L F+ GFG K G+ P+HSWLP AH Sbjct: 189 NAANVLADPSSAIFWTVVAEHAKELDPSLMHLAFVFILIGFGTKTGLFPMHSWLPDAHSE 248 Query: 238 APSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAE 297 APS SAL+S V++ + I++ + + A G P + +L++ G +S + + LA+ Sbjct: 249 APSPTSALLSAVLLNCALLVIIRYYIIISAAIG-PHFPQMLLLVFGMMSVAVSAFFILAQ 307 Query: 298 QDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFL 357 +D+KRLLA+S+VEN+G+I +A+G+ PL G+L ALFH +NH+L K LLF Sbjct: 308 RDMKRLLAYSSVENMGLIAVALGIG-------GPL----GVLAALFHTMNHSLAKTLLFC 356 Query: 358 GAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEW 408 G+G ++ + T DM + + + P TA G LA++ +PP N FISE+ Sbjct: 357 GSGNVLLKYGTRDMGAIKGIIRVAPLTAVMLAGGALALAGMPPFNVFISEF 407 >UniRef50_C7Q1G6 NADH dehydrogenase (Quinone) n=2 Tax=Actinomycetales RepID=C7Q1G6_CATAD Length = 585 Score = 162 bits (410), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 109/316 (34%), Positives = 167/316 (52%), Gaps = 22/316 (6%) Query: 97 LYSLTYMREYEGKGAAAMGFF---MNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLV- 152 LY+L+ E G GA +G F + + +A ++ + + V FE+ +L+S+ L Sbjct: 104 LYTLS---ELGGLGARELGGFAALVQLLLAGLIGAALTADTVDLFVWFEVAALASYGLTG 160 Query: 153 IARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRTLSLSPGLASAVFL 212 + ++ A + + IA L+ G+L++ T P A+ + Sbjct: 161 FFLERPPALEAAFKILVLTTIAGFCVFIAAGLLYNTHGALNYGQLATALTGPLQAADLLA 220 Query: 213 LAFF--GFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTG 270 L F GF KAG++P H WL AH AAP SAL SG+MV +GI GI ++A+ + Sbjct: 221 LGLFIAGFATKAGLVPFHGWLADAHTAAPGPVSALFSGLMVNLGIVGITRIALQIYPAAH 280 Query: 271 LPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHD 330 P+ ++V+ G SAL+G AL + D+KRLLA+ TV VG+I + GL+ D Sbjct: 281 TPVLGALMVL--GVASALVGACLALVQDDLKRLLAYDTVSQVGVI-------VAGLATAD 331 Query: 331 PLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLI 390 P G+ G ++HL+NHALFK LLFL AGAI+ R ++ +MG L + P A I Sbjct: 332 P----AGVAGGVYHLINHALFKTLLFLCAGAIVHRTGETELSRMGGLMRSWPGLTVAFGI 387 Query: 391 GCLAISAIPPLNGFIS 406 G +I+ +PP NG++S Sbjct: 388 GVASIAGVPPFNGYVS 403 >UniRef50_B8I2P6 NADH/Ubiquinone/plastoquinone (Complex I) n=2 Tax=Clostridium RepID=B8I2P6_CLOCE Length = 495 Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 110/355 (30%), Positives = 178/355 (50%), Gaps = 36/355 (10%) Query: 77 MDSLSAFMVLVISLLVVVCSLYSLTYM-REYEGKGAAAMGFFM-----NIFIASMVALLV 130 MDSLS +++ + +L + SLYS++Y +E + K + N F+ SM+ L Sbjct: 65 MDSLSGYILFITTLAFFLVSLYSISYFGQELKNKVITIRKLKLYYSLSNAFVLSMILALT 124 Query: 131 MDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLM----- 185 N + E +L+S FLV +K +I A Y I G ++ +L+ Sbjct: 125 TRNMGVMWISIEATTLASAFLVGFYNNKRAIEAAWKYLIICSVGITFALLGIILLFYSST 184 Query: 186 -----GRESGS-----LDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAH 235 R SG + +AS +L P + F+ GFG K G P+H+WLP AH Sbjct: 185 VKLGGARISGMDWSYLIKYAS----ALDPSILKIAFIFILIGFGTKVGFSPMHTWLPDAH 240 Query: 236 PAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYAL 295 APS SAL+SGV++ ++G+++V + G + G L++ + +S ++ L Sbjct: 241 SQAPSPVSALLSGVLLNTAMYGVIRVMSIVNKCLGSSNYTGNLLIVLSVLSIGTAAVFIL 300 Query: 296 AEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLL 355 +QD KR+LA+S++E++GII L +GV T + + AL+H NHA+ K +L Sbjct: 301 VQQDYKRILAYSSIEHMGIIALGLGVC-----------TPISIFAALYHTFNHAMTKLML 349 Query: 356 FLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYT 410 FL G + + HT + + L K MP T ++G AI+ +PP F+SE+ T Sbjct: 350 FLATGNVYLKHHTKKISSIRGLIKTMPVTGIVFVLGTFAITGMPPFGVFMSEFNT 404 >UniRef50_C8X0Y5 NADH/Ubiquinone/plastoquinone (Complex I) n=26 Tax=Bacteria RepID=C8X0Y5_DESRD Length = 500 Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 122/373 (32%), Positives = 192/373 (51%), Gaps = 27/373 (7%) Query: 47 IISGITQLHAGVTLVARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREY 106 ++S I + G LV F L +D+L +V S L ++ ++Y++ YMR Sbjct: 48 VVSMIPAVLDGKRLVLSLVEIFPGVPLAFHVDALGLLFAVVASCLWIITAMYTMGYMRAE 107 Query: 107 EGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGML 166 F I ++S + + N F + +E++S S++ LV QD+ S +G Sbjct: 108 NEHSQTRFFTFFAIALSSTMGVAFSANLFTLYLFYEVLSFSTYPLVTHHQDQESRVSGRK 167 Query: 167 YF-FIAHAGSVLIMIAFLLMGRESGSLDFASFRTLS---LSPGLASAVFLLAFFGFGAKA 222 Y ++A A L + A +++ +G+LDF + LS SPGL A+ L+ FGF AK Sbjct: 168 YLGYLAGASIGLALPAMIIVYNITGTLDFTAQGILSGAQTSPGLLVALVLMLVFGF-AKV 226 Query: 223 GMMPLHSWLPRAHPAAPSHASALMSGV-MVKIGIFGILKV-----AMDLLAQTGLPLWWG 276 +MPLHSWLP A AP+ SAL+ V +VK+G F + +V +D LA L Sbjct: 227 ALMPLHSWLPAAM-VAPTPVSALLHAVAVVKVGAFSVFRVITGIFGVDFLAANNL----N 281 Query: 277 ILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVV 336 +M + + L + AL++ ++KR LA+ST+ + I A+G AM+ S Sbjct: 282 TGIMYVAGFTLLAASVIALSQDNLKRRLAFSTISQLSYI--ALGAAMLAPS--------- 330 Query: 337 GLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAIS 396 LLG H+ NHA K LF AGAI R H ++ ++ + +MP+T A +G L ++ Sbjct: 331 ALLGGSLHIANHAFMKITLFFCAGAIFVRHHKKNVSELDGIGYKMPFTMGAFAVGSLGMA 390 Query: 397 AIPPLNGFISEWY 409 +PP+ GFIS+WY Sbjct: 391 GLPPIAGFISKWY 403 >UniRef50_Q12ZH4 Na+/H+ antiporter subunit n=2 Tax=Methanosarcinaceae RepID=Q12ZH4_METBU Length = 513 Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 114/350 (32%), Positives = 193/350 (55%), Gaps = 30/350 (8%) Query: 73 LTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKG-AAAMGFFMNIFIASMVALLVM 131 + L D LS+ MV++ S++ + LYSL Y+ EG+ + N+ +A + + Sbjct: 73 IVLVADLLSSGMVVLSSIVSFLALLYSLDYI---EGRSLNSTYHSLFNLLVAGLNGTFLT 129 Query: 132 DNAFWFIVLFEMMSLSSWFLVIARQD----KTS--INAGMLYFFIAHAGSVLIMIAFLLM 185 + F V FE++ L+S LVIA + K+S + A Y + GS +++IA + Sbjct: 130 GDIFNMFVFFEILLLASCGLVIANEKGGVTKSSDKMEATFKYLILNMIGSFVMLIAVASL 189 Query: 186 GRESGSLDFA--SFRTLSLS-----PGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAA 238 G+L+ A S + ++S P A+ LL FG KA + P+H WLP HP A Sbjct: 190 YATVGTLNMADLSVKISTMSAAGTLPWHIYAIALLFIVVFGNKAAIFPMHYWLPDVHPTA 249 Query: 239 PSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQ 298 PS SA++SGVM+K+G +GIL++ L+ + L L I+++ + ++ ++G + A+ + Sbjct: 250 PSPISAMLSGVMIKVGAYGILRIFF-LIFRDALFLLQPIIIL-LALVTIIIGAVSAVGQN 307 Query: 299 DIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLG 358 D+K+LLA+S+V +G + L +G+ +V L AL ++ NHA+ K +LFL Sbjct: 308 DVKKLLAYSSVSQIGYVFLGIGIG-----------SVYALAAALVYMANHAIAKSMLFLT 356 Query: 359 AGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEW 408 +G II T DM MG + K P + A LIG ++I+ +PP+ GF++++ Sbjct: 357 SGGIIHHAGTRDMRHMGGMNKTSPIMSIAFLIGAMSIAGLPPMGGFVAKF 406 >UniRef50_C9RKX6 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RKX6_FIBSS Length = 651 Score = 159 bits (401), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 123/436 (28%), Positives = 214/436 (49%), Gaps = 45/436 (10%) Query: 71 ADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFF--MNIFIASMVAL 128 A + + +D LS M++V++ + + ++YS+ YMRE G FF +++F SM+ L Sbjct: 82 ARIGMLVDPLSVMMLVVVTFISFMVNIYSIGYMREDRAAGR----FFALLSLFSFSMLGL 137 Query: 129 LVMDNAFWFIVLFEMMSLSSWFLV-IARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGR 187 ++ N F + +E++ +SS+ L+ ++++A F + ++ +L+ Sbjct: 138 VIATNLFQMFIFWELVGVSSYLLIGFWYHKPSAVSASKQAFILTRFADSFFLLGIVLVSY 197 Query: 188 ESGSLDFASFRTLSLS--------------PGLASAVF--LLAFFGFGAKAGMMPLHSWL 231 GS DF++ +LSL P + V +L F G K+ M P+H WL Sbjct: 198 VVGSFDFSTLNSLSLIDFQKQFINLGLVTIPKSEALVLGSILIFTGGWGKSAMFPMHIWL 257 Query: 232 PRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGV 291 P A +S + S MV G++ + ++ A L L+M +GA + + Sbjct: 258 PNAMEGPTPVSSIIHSATMVVAGVYLVARL-FPFFAICDNAL---TLIMWVGAFTMVFAA 313 Query: 292 LYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALF 351 + A ++DIKR+LA+ST+ +G ++ A+G +G ++ V G + FH+ HA F Sbjct: 314 VIACTQKDIKRILAYSTLSQLGYMMFALGACKIG-----QVVAVTGWTASTFHIFTHAFF 368 Query: 352 KGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTW 411 K LFL AG++I ++ T+D++ MG L K+M T A LI LAIS IPP +GF Sbjct: 369 KCSLFLIAGSLIHQVGTNDLDAMGGLGKKMKLTYACTLISILAISGIPPFSGF------- 421 Query: 412 QSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEA---Q 468 FS + A Q + + +T GL +++ + F GAPR + + Sbjct: 422 ---FSKDEIILAAFQGHHYVVFGLALLTSGLTTFYMFRLFFLAFHGAPRHEGVKAGHVHE 478 Query: 469 EVPNTMIVAMLLLAAL 484 + T+ +A+L + AL Sbjct: 479 DFAMTLPIAILAIPAL 494 >UniRef50_C5A2R2 Formate hydrogenlyase II subunit C' (Mhy2C2) n=1 Tax=Thermococcus gammatolerans EJ3 RepID=C5A2R2_THEGJ Length = 406 Score = 158 bits (399), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 115/369 (31%), Positives = 195/369 (52%), Gaps = 18/369 (4%) Query: 73 LTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMD 132 LT +D +S L +++L + + SL YM Y K + IFIA+M+ + ++ Sbjct: 8 LTFSLDRISVLFALNVAILGIAALIGSLKYMEIYRFKPKIPYYPTLLIFIAAMLLIPMVQ 67 Query: 133 NAFWFIVLFEMMSLSSWFLVIARQDKTSIN-AGMLYFFIAHA-GSVLIMIAFLLMGRESG 190 + F+ L+E+M+L+S+FL+I + ++ AG YF H + +M+A L G Sbjct: 68 DWLSFLFLWEIMTLASYFLIIYDWPEENVKRAGWKYFVTMHLFDTSPLMLAVTLYYAGQG 127 Query: 191 SLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVM 250 + +F +A+ L GF AKAG+ PLH WLP AHPAAPS SALMSG M Sbjct: 128 TFNFGPISEYK------TAIVALFLLGFAAKAGLFPLHFWLPDAHPAAPSPVSALMSGAM 181 Query: 251 VKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVE 310 V++GI+G ++V +D + + +P W LV A+ +S L +L + D+KRL AWST++ Sbjct: 182 VELGIYGSIRV-LDAVNWS-VPGWIAWLVGAMAVLSMLSAILTYPHQTDVKRLFAWSTID 239 Query: 311 NVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHD 370 N+G + + ++G++ + G +++L H L KG FL GA++ T + Sbjct: 240 NIGWMYAFLLAGLLGVAGIEK--------GVSYYVLAHGLAKGAAFLTTGALLYVFGTRN 291 Query: 371 MEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGP 430 +++M + TA + A+ +PP N F+++ ++LF ++ A+ + L Sbjct: 292 LDEMKGMINSDQTTAGLLIASIFALEGVPPFNLFLNKVEAIKTLFQVNGWLALFVGLEWV 351 Query: 431 IAMVMLAVT 439 IA ++ T Sbjct: 352 IAFIIFLRT 360 >UniRef50_C6LML6 Sodium/proton antiporter ShaA (Fragment) n=5 Tax=Clostridiales RepID=C6LML6_9FIRM Length = 378 Score = 158 bits (399), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 103/315 (32%), Positives = 166/315 (52%), Gaps = 13/315 (4%) Query: 73 LTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMD 132 L+ + A + + + + +L+S Y Y + + F+ + + + + Sbjct: 72 LSFETEGFRAMYGAIAAFMWMAATLFSAEYFAHYRNRNRYYL--FLLVTLGATEGIFFSA 129 Query: 133 NAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSL 192 + + V FE+MSL+S+ V + S+ A Y +A G +++++ L+ ++G+L Sbjct: 130 DLYTTFVFFEVMSLASYVWVAQDEHAPSLRAAATYLAVAVIGGLVMLMGLFLLYNQAGTL 189 Query: 193 DFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVK 252 + + A L FFGF AKAG PLH WLP+AHP AP+ ASAL+SG++ K Sbjct: 190 TISELHDACAGKNVYVAAGCL-FFGFAAKAGAFPLHIWLPKAHPVAPAPASALLSGILTK 248 Query: 253 IGIFGILKVAMDLLAQTGLPLW-WGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVEN 311 GIFGIL ++ +L L W WG V+ +G ++ + G + AL D KR LA S+V Sbjct: 249 TGIFGILVISCKIL----LHDWKWGTFVLVLGTLTMVAGAVLALFSVDFKRTLACSSVSQ 304 Query: 312 VGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDM 371 +G IL VG+ M GL + L V G+L H++NH+LFK +LFL AG I +H D+ Sbjct: 305 IGFIL--VGIGMQGLLAEENALAV---RGSLLHMVNHSLFKLVLFLVAGVIFMNVHKLDL 359 Query: 372 EKMGALAKRMPWTAA 386 ++ ++ P AA Sbjct: 360 NEIRGFGRKKPLLAA 374 >UniRef50_B9XHI6 Proton-translocating NADH-quinone oxidoreductase, chain L n=2 Tax=Verrucomicrobia RepID=B9XHI6_9BACT Length = 636 Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 131/425 (30%), Positives = 219/425 (51%), Gaps = 49/425 (11%) Query: 72 DLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFF--MNIFIASMVALL 129 D+ L++D+LS M+L+++ + + ++S YM+ G +F +++FI SM+ ++ Sbjct: 83 DIGLKLDALSMMMMLIVTGVGGLIHIFSWEYMKGDPGYSR----YFACLSLFIFSMLGIV 138 Query: 130 VMDNAFWFIVLFEMMSLSSWFLV-IARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRE 188 + DN + +E++ +SS+ L+ + ++ +A F G ++ LL+ Sbjct: 139 MADNFLMMFIFWELVGISSYLLIGFWYERPSAADACKKAFLTNRLGDFGFLVGILLVWAT 198 Query: 189 SG-SLDFASFR------TLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSH 241 G L+F + + TL + G+A+A LL F G K+ PLH WLP A P+ Sbjct: 199 LGHRLNFDALKQYLDKHTLEFA-GVATAAGLLVFCGAAGKSAQFPLHVWLPDAM-EGPTP 256 Query: 242 ASALM-SGVMVKIGIFGILKVA--MDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQ 298 SAL+ + MV G++ + ++ +D+ L + + IG I+ALL + A+ + Sbjct: 257 VSALIHAATMVAAGVYMLCRIYFLLDVSGSHALEV-----IAWIGGITALLAAVIAIQQN 311 Query: 299 DIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLG 358 DIKR+LA+ST+ +G +++AVG H P A+FHL HA FK LLFLG Sbjct: 312 DIKRILAYSTLSQLGYMVMAVGT-------HGP-------TPAMFHLTTHAFFKALLFLG 357 Query: 359 AGAIISRL-HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSL 417 AGA+I + H ++ KMGAL K+MP T IG LA++ PPL+GF Y+ + Sbjct: 358 AGAVIHAVHHEQNIWKMGALRKKMPTTFVTFTIGTLALAGCPPLSGF----YSKDGILG- 412 Query: 418 SRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVA 477 +A+ G + +LA L ++ + F GAPRS A+ A E P + Sbjct: 413 ---QAMETHHYGLFILGLLAAI--LTTFYMFRLVFVAFYGAPRSEAADHAHEAPGMLKWP 467 Query: 478 MLLLA 482 +++LA Sbjct: 468 LIILA 472 >UniRef50_B2A693 Proton-translocating NADH-quinone oxidoreductase, chain M n=2 Tax=Clostridia RepID=B2A693_NATTJ Length = 499 Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 104/357 (29%), Positives = 193/357 (54%), Gaps = 21/357 (5%) Query: 60 LVARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGF-FM 118 +V +APP+ + +D L +M L+I+ + + LY+ + + A ++ + Sbjct: 64 VVGEWAPPW---GIEFNVDYLGVYMTLIITGIGFLALLYASRDLHHELQENALSLYYPLY 120 Query: 119 NIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLI 178 + +ASM+ +++ ++ F VL E+ L+S ++ +++K +I A + Y + GS + Sbjct: 121 MLLMASMIGMVLTNDIFNLFVLLEITLLTSVAIICVKENKDTIEASLKYLMLNALGSATV 180 Query: 179 MIAFLLMGRESGSLDFASF-RTLSLS----PGLASAVFLLAFFGFGAKAGMMPLHSWLPR 233 ++ L+ +G L+ + L+++ P + A+ L F GFG K+ + P+H WLP Sbjct: 181 LMGIALLYIITGHLNMTYIAQELAVNFEQYPTVIMAIVALFFVGFGVKSALFPMHVWLPD 240 Query: 234 AHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLW-WGILVMAIGAISALLGVL 292 AH +APS +SA++SG+++K+ + +++ +L + L L G +++ A +LG + Sbjct: 241 AHGSAPSPSSAVLSGLVIKVYVVSLIRFYFIVLPEEILELMPVGEILLWFAAAGMILGSM 300 Query: 293 YALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFK 352 +A+A++DIK++LA+S+V + + L +G LL++ G L H+LNHA+ K Sbjct: 301 FAIAQEDIKKMLAYSSVAQISYVFLGIG-----------LLSLTSFQGGLLHILNHAIIK 349 Query: 353 GLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWY 409 +LFL AGAII + M + R P +G A+ IP NGFIS+WY Sbjct: 350 SMLFLIAGAIIYTSGIRKISHMHGVGLRYPLIMICFTLGAFAMIGIPGTNGFISKWY 406 >UniRef50_B6YTW5 NADH dehydrogenase (Quinone) n=1 Tax=Thermococcus onnurineus NA1 RepID=B6YTW5_THEON Length = 404 Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 114/368 (30%), Positives = 190/368 (51%), Gaps = 22/368 (5%) Query: 73 LTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMD 132 LTL +D + F VL +++L + + S YMR YE K + IFI SM+ + ++ Sbjct: 6 LTLSLDRTAVFFVLNVAILGIAALVASFRYMRIYEFKPKIPYYPTLAIFIVSMLLIPMVQ 65 Query: 133 NAFWFIVLFEMMSLSSWFLVIARQDKTSIN-AGMLYFFIAHA-GSVLIMIAFLLMGRESG 190 + F+ L+E+M+L+S+FL+I + S+ AG YF H + +M+A + G Sbjct: 66 DWLSFLFLWEIMTLASYFLIIYDWPEESVKKAGWKYFVTMHLFDTSPLMLAVTMYYAFHG 125 Query: 191 SLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVM 250 + +F + S +A+ L GF AKAG+ PLH WLP AHPAAPS SALMSG M Sbjct: 126 TFNFGAITEYS------NAIVALFLLGFAAKAGLFPLHFWLPDAHPAAPSPVSALMSGAM 179 Query: 251 VKIGIFGILKVAMDLLAQTG--LPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWST 308 V++G++G ++V L G + W L+ A+ +S L + + D+KRL AWST Sbjct: 180 VELGLYGTIRV----LNAVGWSVATWIVYLIGAMAVLSMLAAIFSYALQDDVKRLFAWST 235 Query: 309 VENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHT 368 ++N+G + L + ++G+S + G ++++ H L K F+ GA++ T Sbjct: 236 IDNMGWMYLLILAGLLGVSGVEK--------GVDYYVVAHGLAKAAAFISTGALLYVFGT 287 Query: 369 HDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLA 428 ++K + TA + A+ +PP N F+++ ++L ++S A L Sbjct: 288 RSLKKAKGMMNTDSLTAGLMMASIFALEGVPPFNLFMNKLNVIKTLLTVSPALAYFTALE 347 Query: 429 GPIAMVML 436 IA ++ Sbjct: 348 WVIAFILF 355 >UniRef50_Q1AVJ0 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AVJ0_RUBXD Length = 656 Score = 155 bits (392), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 177/642 (27%), Positives = 289/642 (45%), Gaps = 102/642 (15%) Query: 60 LVARFAPPFEFA------------DLTLRMDSLSAFMVLVISLLVVVCSLYSLTYM---R 104 LV R P EF+ + + +D L+A M++V+S + ++ LYS +M R Sbjct: 56 LVIRDGRPLEFSVYWINLGEGGGFPIGVYIDELAAVMLVVVSFVSLMIQLYSGGFMAGDR 115 Query: 105 EYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSI-NA 163 + A +N+F ASM+ L+V N + +E++ L S+ L+ +K + +A Sbjct: 116 RFAWYYAV-----LNLFTASMLGLVVAPNFIELYICWELVGLCSYLLIGHWFEKPAARDA 170 Query: 164 GMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRTLS----LSPGLASAVFLLAFFGFG 219 + F + G + + ++ R +G+ F + + L +A +L F G Sbjct: 171 ALKAFIVTRIGDAALFVGIIMFWRATGTTAFEGIAEAAQAGFIGGSLLTAAVVLVFVGAI 230 Query: 220 AKAGMMPLHSWLPRAHPAAPSHASALM-SGVMVKIGIFGILKVAMDLLAQTGLPLWWGIL 278 K+ PLH WLP A P+ SAL+ + MV G++ + + D+ Q+ + ++ Sbjct: 231 GKSAQFPLHVWLPDAMEG-PTPVSALIHAATMVAAGVYLVART-YDIFVQSPTAM---LI 285 Query: 279 VMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGL 338 V IGA +A + AL ++DIKR++A+STV +G ++L +GV Sbjct: 286 VAYIGAFTAFMAATMALVKKDIKRVIAYSTVSQLGYMMLGLGVG--------------AF 331 Query: 339 LGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAI 398 +FHL NHA FK LLFL AG+II + ++++ +MG L +RMP T +I L+++ I Sbjct: 332 SAGMFHLYNHAFFKALLFLCAGSIIHAMDSYNLFEMGGLRRRMPLTFWTMVIAGLSLAGI 391 Query: 399 PPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGA 458 PL GF S+ S F E + A I V L A F ++ + F G Sbjct: 392 FPLAGFWSKDAIIASAFE----EHYYVLYALAIGTVFLT-----AFYIFRAIF-LAFTGE 441 Query: 459 PRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGI 518 PR+ A A E P M V M++LA L V ++ W+ I F P G Sbjct: 442 PRTEGAARAVESPGVMTVPMVILAVLSV----ASGWVG-----IPEGFGL--PVRDYFGG 490 Query: 519 ALVPGTFHT---QVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENA 575 + P F +V P LL A+ +L GL + G A+A Y A Sbjct: 491 FVAPSGFARETLEVEPHGFSFLLAAISVLVGLAGI------------GLAYAM-YVARPA 537 Query: 576 MAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARA-----QSTEPFWDERVI 630 +AP+ + LF L LD + RA ++ + F D V+ Sbjct: 538 LAPA----------MARRLFGLHTFLDKGWYFDALYGATFVRAAFAVGRAVQGF-DREVL 586 Query: 631 RPIVS----ATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLI 668 +V T RL + ++ +Q+G + Y L++V +++VL I Sbjct: 587 GGLVGGIARGTGRLGEALRRVQTGRVQNYALFIVVSVLVLAI 628 >UniRef50_A8RP33 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RP33_9CLOT Length = 658 Score = 155 bits (391), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 112/403 (27%), Positives = 197/403 (48%), Gaps = 20/403 (4%) Query: 75 LRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNA 134 LR D + + + ++ +L+S+ Y + +G FF + + + + + D+ Sbjct: 77 LRADGFRWLYSTIAAFMWMMTTLFSMEYFARHGNRGRYC--FFSLLTCGATMGVFLSDSL 134 Query: 135 FWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDF 194 F + FE+M L+S+ +VI + + + A Y IA G + + ++ +G+L Sbjct: 135 FSLFLFFEIMGLTSFVMVIQEETEAAGRAARTYLAIAVIGGLCALFGIFMIAAGTGNLSM 194 Query: 195 ASFRTLSLSPGLASAVFLLAFFGFGA---KAGMMPLHSWLPRAHPAAPSHASALMSGVMV 251 S + G ++L KAGM PLH WLP AHP AP+ ASAL+SG++ Sbjct: 195 DSLEQFRKATGGTWPLYLAGALLLAGFGAKAGMYPLHVWLPNAHPVAPAPASALLSGILT 254 Query: 252 KIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVEN 311 K G+FGIL V + + + WG++++ GA++ +LG + A+ D+KR LA S++ Sbjct: 255 KTGVFGILAVTVTMFRHD---MAWGMVLLVPGAVTMVLGAILAVFSIDLKRTLACSSMSQ 311 Query: 312 VGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDM 371 +G IL G AM L + L V G + H++NH++ K +LF+ AG I LH D+ Sbjct: 312 IGFIL--TGCAMQCLLGEENGLAVS---GTVLHMVNHSMIKLVLFMAAGCIYMNLHKLDL 366 Query: 372 EKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPI 431 ++ + P+ +G I IP NG++S+ +S+ + +E + Q A + Sbjct: 367 NEIRGYGRNKPFLMLVFAMGAYGICGIPLWNGYVSKTLLHESI--VEYIEVLGAQGADAL 424 Query: 432 AMVMLA----VTGGLAVMCFVKMYGITFC-GAPRSTHAEEAQE 469 +L + GGL V K++ F AP ++ ++ Sbjct: 425 PFQVLEWAFLLAGGLTVAYMAKLFAAIFLEKAPMGRERDDREK 467 >UniRef50_D2LKE4 NADH/Ubiquinone/plastoquinone (Complex I) n=2 Tax=Rhizobiales RepID=D2LKE4_RHOVA Length = 499 Score = 154 bits (390), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 113/350 (32%), Positives = 186/350 (53%), Gaps = 32/350 (9%) Query: 72 DLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVM 131 DL L L+ V + ++L ++Y++ Y+ E E + GFF ++ + + V + + Sbjct: 72 DLVLSASPLALLFVTLSTVLWFFTTIYAIGYL-EGEPHRSRFFGFF-SLCVTATVGVALS 129 Query: 132 DNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGS 191 N F++ +E+++L+++ L++ R + + +AG +Y +G L+++ + + +G+ Sbjct: 130 GNLITFVLFYELLTLATYPLLVHRGTEAARHAGKIYLAYTMSGGALLLLGTIWLYTLTGT 189 Query: 192 LDFASFRTLS-LSPGLASA---VFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMS 247 LDF S + LSP + +F+L G G KA ++PLH WLP A AP+ SAL+ Sbjct: 190 LDFVSQGFVQHLSPLHDTTLVTIFVLLIAGLGVKAALVPLHGWLPEAM-VAPAPVSALLH 248 Query: 248 GV-MVKIGIFGILKVAMDLL-----AQTGL--PLWWGILVMAIGAISALLGVLYALAEQD 299 V +VK G FGI+ V ++ A G+ PL W + A++ + G L AL + D Sbjct: 249 AVAVVKAGAFGIVLVVYEVFGVQFAASLGVLSPLAW------LAAVTIIYGSLRALFQDD 302 Query: 300 IKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGA 359 +KR LA+STV V I+L V +A P+ T+ G L HL+N + K LF A Sbjct: 303 LKRRLAYSTVSQVAYIILGVAIA-------SPIATI----GGLVHLVNQGVMKITLFFCA 351 Query: 360 GAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWY 409 G+ L H + +M + RMPWT AA IG + PP+ GFI++WY Sbjct: 352 GSFAQTLGVHKVSEMNGIGGRMPWTMAAFTIGAFGMIGAPPVAGFITKWY 401 >UniRef50_C0YTV8 NADH dehydrogenase I chain L n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YTV8_9FLAO Length = 637 Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 147/531 (27%), Positives = 245/531 (46%), Gaps = 70/531 (13%) Query: 72 DLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVM 131 + ++D LS MV++I+ + + LYS+ YM KG ++N+FI SM+ L++ Sbjct: 76 NFGFQIDQLSLMMVMIITGIGSLIHLYSIGYMSH--DKGFYKFFTYLNLFIFSMLLLVMG 133 Query: 132 DNAFWFIVLFEMMSLSSWFLV-IARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESG 190 N + +E + L S+ L+ ++ A F + G + ++I ++ ++ Sbjct: 134 SNYLILFIGWEGVGLCSYLLIGFWYTNEEYGKAARKAFIMNRIGDLALLIGIFMIASQTN 193 Query: 191 SLDFASFRTLSLSPGLASAVFLLA----FFGFGAKAGMMPLHSWLPRAHPAAPSHASALM 246 ++D+ S + L V + F G K+ +PL++WLP A A P+ SAL+ Sbjct: 194 AVDYLSVAENASKFELDGTVIIFITASLFIGATGKSAQVPLYTWLPDAM-AGPTPVSALI 252 Query: 247 -SGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLA 305 + MV GI+ L V + L T P G+ ++ IG ++A L YAL + DIK++LA Sbjct: 253 HAATMVTAGIY--LVVRSNFLF-TLAPTVQGV-ILFIGFLTAALAGFYALRQNDIKKVLA 308 Query: 306 WSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISR 365 +STV +G + +A+G+ A+FH++ HA FK LLFLGAG++I Sbjct: 309 YSTVSQLGFMFIALGLG--------------AYTTAMFHVMTHAFFKALLFLGAGSVIHA 354 Query: 366 L-HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVA 424 + + DM MG L K +P T A LIG LAIS P L+G IS+ + F+ Sbjct: 355 MSNEQDMRFMGGLKKYIPLTHATFLIGTLAISGFPLLSGMISKDEILVAAFA-------- 406 Query: 425 LQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEA--QEVPNTMIVAMLLLA 482 P+ V+L V + ++Y +TF G R T ++ E P+ M + +++LA Sbjct: 407 ---KNPVYWVILFVLAAITATYMFRLYYLTFHGEFRGTEEQKHHLHESPSNMTLPLIVLA 463 Query: 483 ALCVL--------------IALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQ 528 L V+ A WL P T + + + ++ VP F+T+ Sbjct: 464 VLSVIGGFINLPHFIGHGHYAKLMEWLKP-------VLTEQSYSQMEATLSGVP--FNTE 514 Query: 529 VTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPS 579 ++LL A ++ W R+ ++ A GWE A Sbjct: 515 ------MILLAATVIMFFSVWFIVRNTYVKKKKMAVAEESYTGWERLSAKK 559 >UniRef50_A0L9R8 NADH dehydrogenase (Quinone) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L9R8_MAGSM Length = 1047 Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 118/394 (29%), Positives = 209/394 (53%), Gaps = 31/394 (7%) Query: 100 LTYMREYEGKGAAAMGFFMNIFI--ASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQD 157 +T + Y G +GFF ++ + A ++ L+ ++F F +E++++ S+FL++ + Sbjct: 528 VTLLAGYHAHGRR-VGFFPSVMLMFAGLIMLVTAKDSFNFFAAWELLTVGSYFLIM--RG 584 Query: 158 KTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFG 217 K S + Y + G+ LI+ F + + S+ + L +A VF+L G Sbjct: 585 KESEPHALSYVLFSLGGAFLILAGFAIAAQGGQSMVLGALG--GLPAAIAPWVFVLLAIG 642 Query: 218 FGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGI 277 F K + +H WLP AH A + S ++SG+++K G+FG + + +++ Q L + Sbjct: 643 FMTKTASIGVHIWLPGAHAEAETDVSPMVSGILLKAGLFGFVVLLLNMGHQKILGVDLTH 702 Query: 278 LVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVG 337 +++ IGA SALLG L A+ ++D KRLLA+S++ +G A+ GL+L + L G Sbjct: 703 VLLWIGAFSALLGNLMAIFQEDAKRLLAYSSIGQ-------MGYALFGLALMNHL----G 751 Query: 338 LLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISA 397 L AL ++NH ++K +LFL G + R T M +MG L K MP + + L+G +A+S Sbjct: 752 WLMALMFVINHYVYKSMLFLAVGGVAKRTGTRAMYQMGGLIKLMPLSFISVLVGIIAVSG 811 Query: 398 IPPLNGFISEWYTWQSLFSL-SRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFC 456 +PPL+GF W + ++ + +++ V L LAGPIA + L ++ F Sbjct: 812 LPPLSGFGGRWIFYNAILTAETQLPMVVLFLAGPIAFLYL-----------FRLIHTIFL 860 Query: 457 GAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIAL 490 G + H +E P ++V ++ AL +++AL Sbjct: 861 GQLKDEH-RRLKEAPFWILVPQMIYVALLMVVAL 893 Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 84/351 (23%), Positives = 156/351 (44%), Gaps = 35/351 (9%) Query: 66 PPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGK-GAAAMGFFMNIFIAS 124 PPF + LRM A ++ +I+ L S +MRE + G M + IF+ Sbjct: 67 PPFA---INLRMGMSEAALLTLIT----ATGLLSALHMREVLLRVGQRGMAVLL-IFVMG 118 Query: 125 MVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLL 184 + +++ + F V FE++ +++ LV+ DK S+ AG Y I+ ++L+++ Sbjct: 119 LSGIILTRDIFNLFVFFELVVIATGGLVLLSDDKRSLGAGFKYLIISQVITILMLVGITF 178 Query: 185 MGRESGSLDFASFRTLSLSPGLASAV-------FLLAFFGFGAKAGMMPLHSWLPRAHPA 237 + +G+L+ SL G+ A+ F F A+ P + W + + Sbjct: 179 IYHATGTLNIDGMSGASLQGGVDLAIMKGGAVAFFCLFIAVIAELKPFPANGWALDIYES 238 Query: 238 APSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAE 297 A +AL S + + K+ + AQ W ++ A+G ++ + L+AL + Sbjct: 239 AHPSFAALFSAASASAALIAVDKILLIGGAQ------WHLVATAVGIVTFVASNLFALTQ 292 Query: 298 QDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFL 357 +R+L +S+V VG++L +G + L D L V G + LL H + K LF Sbjct: 293 TCDRRMLGYSSVAQVGLVLTVIGQKNL---LGDNYLYVAGGI-----LLAHGVGKAGLFW 344 Query: 358 GAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEW 408 +G + R ++ AL + P + + ++ +PP GF ++W Sbjct: 345 LSGLVAQR----NLTAWSAL-RGHPLLIFSFVTFVALLTGLPPFPGFYAKW 390 >UniRef50_C0GJ30 NADH dehydrogenase (Quinone) n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJ30_9FIRM Length = 497 Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 116/347 (33%), Positives = 190/347 (54%), Gaps = 32/347 (9%) Query: 77 MDSLSAFMVLVISLLVVVCSLYSLTYM-REYEGKGAAAMGFFMNIF---IASMVALLVMD 132 ++ SAFM+LVIS + +V +YS++ + RE G +G++ F + SM+ +++ + Sbjct: 79 IEPFSAFMLLVISAVCLVIMIYSMSSLGREIPASG---IGWYYTTFLLLVGSMMGMVMTN 135 Query: 133 NAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSL 192 + F V E+ +++ LV+A+ + + A Y +A GS ++ L+ +G+L Sbjct: 136 DLFNMYVFIEVTGIAACALVLAKGGRLATEASFKYLLLATVGSGFVLTGIALIYVITGNL 195 Query: 193 D--FASFRTLSLSPGLASAVF-LLAFF--GFGAKAGMMPLHSWLPRAHPAAPSHASALMS 247 + F + + P ++ +L+FF GFG K+ + PLH WLP AH +AP+ +SA++S Sbjct: 196 NISFVAAEFALVYPQYPYLIWTVLSFFLVGFGIKSALFPLHVWLPDAHSSAPTTSSAVLS 255 Query: 248 GVMVKIGIFGILKV-----AMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKR 302 G++VK I + K DLL Q + + IL+MA GAI L G ++A + D+KR Sbjct: 256 GLVVKAYIVALAKFYFQIFGFDLLDQ--IFIRHMILIMATGAI--LGGSMFAFVQLDLKR 311 Query: 303 LLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAI 362 LA+S+V +G I L GL L P +GL + H+ NHA+ K LFL AGAI Sbjct: 312 RLAYSSVAQIGYIFL-------GLGLSSP----IGLAAGILHIFNHAVMKACLFLAAGAI 360 Query: 363 ISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWY 409 + + ++ LA +MP T A I L++ +P +GFIS+WY Sbjct: 361 YRQTGEKRVNRLQGLAFQMPITMFAFSIAALSMVGLPLFSGFISKWY 407 >UniRef50_C8NL94 NADH dehydrogenase (Quinone) n=18 Tax=Bacteria RepID=C8NL94_COREF Length = 516 Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 112/356 (31%), Positives = 192/356 (53%), Gaps = 25/356 (7%) Query: 63 RFAPPF-EFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIF 121 F+ PF +DL LR+D L+ F + ++L ++ ++Y++ Y+ E + + + GFF ++ Sbjct: 69 EFSMPFLPGSDLVLRVDPLALFFATLSAVLWLLTTVYAIGYLGEGQNR-SRFFGFF-SLC 126 Query: 122 IASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIA 181 + + V + N F+V +EM++L ++ LV D+ S+ A +Y +G + ++I Sbjct: 127 VTATVGISFSGNLITFLVFYEMLTLVTYPLVAHWGDRASLKAARVYLRYTLSGGLALLIG 186 Query: 182 FLLMGRESGSLDFASFRTLSL------SPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAH 235 + + +G +DFA + + SPG+A +F L G G KA ++PLH WLP A Sbjct: 187 VVWLTIYAGPVDFAPGGAVGVTEVATHSPGIAIVIFALLVGGLGVKAALVPLHGWLPNAM 246 Query: 236 PAAPSHASALMSGV-MVKIGIFGILKVAMDLLAQTGLPLWWGIL--VMAIGAISALLGVL 292 AP+ SAL+ V +VK G+FGI++V D+ G+ G+L ++ + ++ + G Sbjct: 247 -VAPAPVSALLHAVAVVKAGVFGIVRVIDDVYG-IGVASELGVLTPLLVVACVTIIYGSY 304 Query: 293 YALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFK 352 AL + D+K+ LA+STV V + AVG++ L TV G+ G + HL++ + K Sbjct: 305 QALRQIDLKKRLAFSTVSQVSYV--AVGIS---------LATVAGVTGGVAHLVHQGIMK 353 Query: 353 GLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEW 408 LF AG L ++++ L RMP T+ A IG + +PP GFIS+W Sbjct: 354 ITLFFCAGLYAETLGAKRVDQLTGLGHRMPGTSLAFTIGAFGMIGLPPTAGFISKW 409 >UniRef50_Q04YB3 NADH dehydrogenase (Ubiquinone), L chain n=7 Tax=Bacteria RepID=Q04YB3_LEPBL Length = 648 Score = 152 bits (385), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 115/359 (32%), Positives = 187/359 (52%), Gaps = 38/359 (10%) Query: 72 DLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVM 131 L ++D LS +M L+I+ + + LYS+ YM++ G A ++N+FI +M+ L++ Sbjct: 79 SLAYQVDQLSLYMTLIITGIGSLIHLYSIGYMKD--DPGFARYFAYLNLFIFAMLNLVLA 136 Query: 132 DNAFWFIVLFEMMSLSSWFLV-IARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESG 190 +N + +E + L S+ L+ +++ NAGM F + G + +++ L+ +G Sbjct: 137 ENLILLFLGWEGVGLCSYLLIGFDYHKESAANAGMKAFIVNRIGDLGMLLGIALVFWYTG 196 Query: 191 SLDFASFRTLSLSPGLASAVFLLA------FFGFGAKAGMMPLHSWLPRAHPAAPSHASA 244 S+ F + L + S ++L F G K+ +PLH WLP A A P+ SA Sbjct: 197 SVSFTTIEGAILE--IPSFRYILPVTAVCFFIGAIGKSAQLPLHVWLPDAM-AGPTPVSA 253 Query: 245 LM-SGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRL 303 L+ + MV G+F I ++ L+ + W ++ IG+++A L + DIK++ Sbjct: 254 LIHAATMVTAGVFLIARLNPIFLSAPQVGHW----IVVIGSMTAFFAATIGLFQNDIKKV 309 Query: 304 LAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAII 363 LA+STV +G + +A+G + LFHL+ HA FK LLFLG+G++I Sbjct: 310 LAYSTVSQLGYMFVAMGAG--------------AYVAGLFHLMTHAFFKALLFLGSGSVI 355 Query: 364 SRLH-THDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFIS------EWYTWQSLF 415 LH D+ MG L KRM T L+G LAIS IPP +GF S + YT+ +LF Sbjct: 356 YALHHEQDLRNMGGLKKRMKITWITFLVGSLAISGIPPFSGFFSKDLILEKSYTYGALF 414 >UniRef50_C5A4Q0 Membrane bound oxidoreductase, MbxH' subunit (MbxH2) n=4 Tax=Thermococcus RepID=C5A4Q0_THEGJ Length = 617 Score = 152 bits (385), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 129/453 (28%), Positives = 227/453 (50%), Gaps = 70/453 (15%) Query: 137 FIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFAS 196 F + +E+M+ +S F+++ R +K A + YF ++ G+ +++A ++ ++G+L+F S Sbjct: 126 FFLFWELMTFAS-FMMVLRYNK---RASLKYFVLSIIGAYAMLLAIAILYAKTGTLEFQS 181 Query: 197 FRTLSLSPG------------LASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASA 244 R + + L A+FL+AF G KAG PLH W P A+ + Sbjct: 182 LRRMVVYAAYGMVPLTKTDMVLVYALFLVAF---GVKAGTWPLHVWAPDAYSETNQSYTT 238 Query: 245 LMSGVMVKIGIFGIL--------KVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALA 296 SG + K G +G + K+ DL G PL+ IL +GAI+ ++ A+ Sbjct: 239 FFSGALSKAGAYGFVLMFILLGVKLYTDLGTFRGHPLFTYILAW-LGAITVVVAGFLAVL 297 Query: 297 EQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLF 356 ++D+++LLA+S+V VG I+LA+GV + +G GA FH+L+HA+FKGL + Sbjct: 298 QEDLRKLLAYSSVSQVGYIVLALGVG-----------SGIGFTGAFFHILSHAVFKGLFW 346 Query: 357 LGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFS 416 L A+I R E G LA++MP T A LI L+++ IPP+ GF S+W +++ Sbjct: 347 LITAALILRTGKTRFEDFGGLAEKMPVTFAMALIAVLSLAGIPPMAGFASKWLIYEA--- 403 Query: 417 LSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVK-MYGITFCGAPRSTHAEEAQEVPNTMI 475 A+ P+ + + +A V+ +Y I F R + ++ +E P ++ Sbjct: 404 -------AISAHMPLVAGAIFLGSAIAFAYVVRFLYAIWF--GQRPSDLDDVEEAPLPLL 454 Query: 476 VAMLLLAALCVLIALSASWLAPK-IMHIAHAFTNTPPA-----TVASGIALVPGTFHTQV 529 V M +LA V+ +AP ++ + F NT A ++++G+ GT++ Sbjct: 455 VGMTILAIPNVVFG-----IAPGLVVRFLNKFINTGVAVNSYYSISTGV----GTYNAL- 504 Query: 530 TPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRT 562 S+ L+L++ + + +Y R+RR T Sbjct: 505 --SVALILVVGLAIAGLIYIYGARARRIPLTNT 535 >UniRef50_C0Q995 MnhA2 n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0Q995_DESAH Length = 494 Score = 152 bits (384), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 120/362 (33%), Positives = 193/362 (53%), Gaps = 26/362 (7%) Query: 57 GVTLVARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGF 116 G +V A F + R+D+ LV S L ++ S+YS+ YMR + Sbjct: 59 GKAIVYTVAQIFPNLGIAFRVDAFGMLFALVASSLWIITSIYSMGYMRGLDEHSQTRYYS 118 Query: 117 FMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSV 176 F + +++ + + N + +EM+SL+++ LV QD+ + ++G Y GS+ Sbjct: 119 FFAVALSATIGVAFSANLLTLYLFYEMLSLATYPLVTHHQDREARSSGRKYLLYILGGSI 178 Query: 177 -LIMIAFLLMGRESGSLDFASFRTLS--LSPGLASAVFLLAFFGFGAKAGMMPLHSWLPR 233 L + A L+ +G+LDFA+ ++ ++ GLA + L+ FGF AK G+MP+HSWLP Sbjct: 179 GLALPAMLITYHFTGTLDFAAQGVMAGHINSGLALLLSLMFLFGF-AKVGIMPMHSWLPA 237 Query: 234 AHPAAPSHASALMSGV-MVKIGIFGILKV-----AMDLLAQTGLPLWWGILVMAIGAISA 287 A AP+ SAL+ V +VK+G F +++V +DLLAQ + W +V I +I+ Sbjct: 238 AM-VAPTPVSALLHAVAVVKVGAFSVVRVLTGIVGVDLLAQYHIN--W--IVCTIASITV 292 Query: 288 LLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLN 347 ++ L AL++ ++KR LA+ST+ + I+L V LL+ G+ G + H+ Sbjct: 293 VVASLIALSQDELKRRLAFSTIGQLSYIVLGVA-----------LLSTSGMTGGMLHIAM 341 Query: 348 HALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISE 407 HA K LF AGAI + KM + ++MP T A LIG L++ +PP GFIS+ Sbjct: 342 HAFGKITLFFCAGAIFCTTGIKHISKMKGIGRQMPITMTAFLIGSLSVVGLPPCGGFISK 401 Query: 408 WY 409 WY Sbjct: 402 WY 403 >UniRef50_Q2RXM6 NADH dehydrogenase (Quinone) n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RXM6_RHORT Length = 505 Score = 152 bits (383), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 129/420 (30%), Positives = 205/420 (48%), Gaps = 30/420 (7%) Query: 75 LRMDSLSAFMVLVISLLVVVCSLYSLTYMR--EYEGKGAAAMG---FFMNIFIASMVALL 129 L +D LS M++VI+L + LYS YM E A + FF+ +FI +MV L+ Sbjct: 94 LALDPLSCLMLVVITLCGFLVVLYSGGYMSLGNVEHPSDANLARYYFFVCLFITAMVGLV 153 Query: 130 VMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRES 189 N F + +E+ +L SW L+ D ++ + I H + + A +L+ E+ Sbjct: 154 SSPNYFQLFLFWELTTLCSWGLISFYGDAEALKSAYKALLITHGAGLFLAAAVVLIYVET 213 Query: 190 GSLDFASFRTLSLSPGLASAVFLLAFFGFGA--KAGMMPLHSWLPRAHPAAPSHASALMS 247 GS F + L+ PGL S V +AF G A KA P +WLP A A +S L + Sbjct: 214 GSFAFDAINLLT--PGLKSLV--IAFMGIAALAKAAQFPFFTWLPTAMAAPTPASSYLHA 269 Query: 248 GVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWS 307 MVK GI+ + ++A+ + A P G+ + I ++ L V+ + D+KRLLA+S Sbjct: 270 AAMVKAGIYLLARLALSVDA---FPPELGLALSVIAIVTMCLAVVLYFPQDDLKRLLAFS 326 Query: 308 TVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLH 367 T+ N+G ++L + + +G + L G + HL+ H+ K LLFL GAI Sbjct: 327 TIANLGYMVLGIAMGAMG--------SRTALEGGMLHLVGHSFTKSLLFLAVGAISYATG 378 Query: 368 THDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQL 427 T + + L ++MP TA A ++G +AIS +PP N F S++ LS L + Sbjct: 379 TRKIGLLSGLGRKMPVTALAFVLGAMAISGMPPFNMFWSKYLIVSGAIELSSTWGWTLAV 438 Query: 428 AGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVL 487 + + G A F+ + F G P S AE A++ M++ +++L A VL Sbjct: 439 -----LTLAESVAGFA--WFLHIVHKVFFG-PVSPTAENARDPGAAMLIPLIVLMAFSVL 490 >UniRef50_Q6APF1 Probable hydrogenase, component F-formate hydrogenlyase subunit 3 n=1 Tax=Desulfotalea psychrophila RepID=Q6APF1_DESPS Length = 475 Score = 151 bits (382), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 98/338 (28%), Positives = 177/338 (52%), Gaps = 22/338 (6%) Query: 79 SLSAFMVLVISLLVVVC-SLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWF 137 S ++L+++ + +C S+Y+ +Y+ E E + M +F+ +M + + D+ Sbjct: 58 SPEGLLILLLTSFIFICISIYAFSYIEETEVENKPLFNCCMMLFLGTMSMVTLSDHPIVL 117 Query: 138 IVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIA--FLLMGRESGSLDFA 195 + E +L S L+ + + ++ A Y I G L ++ F+ + + G++D Sbjct: 118 WIAVEATTLVSAPLIFIHRSQEALEATWKYVLICSVGIALALLGCFFITLSMDLGNIDAP 177 Query: 196 -SFRTL-----SLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGV 249 +F +L L P F+ GFG K G+ P+H+WLP AH APS ASAL+SG Sbjct: 178 LTFNSLYQVAPQLDPLWLKTGFIFVVIGFGTKMGLAPMHTWLPDAHSQAPSPASALLSGA 237 Query: 250 MVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTV 309 ++ GI KV + L+ GL + G +++ G S +G ++ +++ D KR+LA+S++ Sbjct: 238 LLNCAFLGIYKVHV-LMTMAGLGGFSGNVLVGFGLFSMFVGAIFIISQPDYKRMLAYSSI 296 Query: 310 ENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTH 369 +N+G+I VG+ G +++ GA H+L+H+L K LFL AG ++ + Sbjct: 297 KNMGVIAFGVGIG--GFAVY----------GAFLHILHHSLIKSSLFLSAGNVLLGFDSK 344 Query: 370 DMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISE 407 ++K+G + + +P T + G + IS +PP FISE Sbjct: 345 KVQKIGGVVRHLPKTFISLFAGFVGISGLPPFGLFISE 382 >UniRef50_Q11VC3 NADH dehydrogenase I chain L n=5 Tax=Bacteroidetes RepID=Q11VC3_CYTH3 Length = 636 Score = 151 bits (382), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 158/618 (25%), Positives = 287/618 (46%), Gaps = 88/618 (14%) Query: 73 LTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMD 132 L+ ++D+LS + + +I+ + + +YS++YM + EG ++N+F+ SM+ L++ Sbjct: 78 LSFQIDNLSVWFMSIITGVGFLIHVYSISYMHDDEG--VTRYFSYLNLFVFSMLLLVMGS 135 Query: 133 NAFWFIVLF---EMMSLSSWFLV-IARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRE 188 N ++V+F E + L S+ L+ +++ +A F + G + ++ LL+ + Sbjct: 136 N---YVVMFTGWEGVGLCSYLLIGFWFKNQAYNDAAKKAFIMNRIGDLGFLLGMLLIYNQ 192 Query: 189 SGSLDFASFRTLSLS-------PGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSH 241 SL+++ +L G+ A+ +L F G K+ +PL++WLP A A P+ Sbjct: 193 FKSLEYSVVFDQALKIINPNEPSGIIFAITMLLFVGAMGKSAQIPLYTWLPDAM-AGPTP 251 Query: 242 ASALM-SGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDI 300 SAL+ + MV GI+ +A + + P I + +G +A+L L L + DI Sbjct: 252 VSALIHAATMVTAGIY---MIARSNILYSMAPCTLDI-IYVVGTGTAILAALIGLTQTDI 307 Query: 301 KRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAG 360 K++LA+STV +G + +A+G+ G +FH+ HA FK LLFLGAG Sbjct: 308 KKVLAYSTVSQLGFMFMAIGLG--------------GYSAGVFHVTTHAFFKALLFLGAG 353 Query: 361 AIISRLH-THDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSR 419 ++I + D+ KMG L K++P T +I LAI+ IPPL GF FS Sbjct: 354 SVIHAMGGEQDIRKMGGLMKKLPITFITFIIATLAIAGIPPLAGF----------FSKDA 403 Query: 420 VEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPR-STHAEEA-QEVPNTMIVA 477 + A+A + + P+ + L +M +TF G R +TH +E E P M + Sbjct: 404 ILALAFE-SSPLKWGLGVFAALLTTFYMFRMLFLTFFGEFRGTTHQKEHLHESPLLMTIP 462 Query: 478 MLLLAALCVLIALSASWLAPKIMHI-AHAFTNTPPATVASGIALVPGTFHTQVTPSLLLL 536 +++LA L V+ +I H+ H +N +A +P H +L+ Sbjct: 463 LMVLALLTVVSGFI------EIPHVFVHEGSNWFSHYLAGANIALPAASHLSAETEFVLM 516 Query: 537 ---LLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSA 593 L+L + ++ Y L+ + + PS + + + Sbjct: 517 GSALVLVVLVIITTYVLYVSKK-------------------TLPPSSEAELSFIDKLSYN 557 Query: 594 LFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVS----ATQRLAKEIQHLQS 649 F + + D + + + + T F +++ I IV+ + Q K I+++QS Sbjct: 558 KFYVDELYDTII-----VKPIAFLSDFTSTFIEKQFIDRIVNFSGKSVQWSGKTIRYIQS 612 Query: 650 GDFRLYCLYVVAALVVLL 667 GD Y +++V +VV+L Sbjct: 613 GDVNTYAIFMVIGIVVIL 630 >UniRef50_C0Z765 NADH-quinone oxidoreductase chain L n=2 Tax=Bacillales RepID=C0Z765_BREBN Length = 637 Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 123/411 (29%), Positives = 205/411 (49%), Gaps = 40/411 (9%) Query: 72 DLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVM 131 ++ ++ L+A M+++++L+ ++ +YS YM E ++ +F SM+ L++ Sbjct: 78 NMGFEVNPLNAMMLVIVTLVSLLVQIYSKGYMHGDERFPVFYQ--YLALFTFSMLGLVIS 135 Query: 132 DNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFI-AHAGSVLIMIAFLLMGRESG 190 N + +E++ + S+ LV K A FI G + + I L+ +G Sbjct: 136 PNLLQVYIFWELVGVCSFLLVGYYYFKNEAKAAAKKAFIVTRIGDLGLFIGICLLFWWTG 195 Query: 191 SLDFAS-FRTLSL---SPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALM 246 S ++ + F +++L P + + +L F G K+G PLH+WLP A P+ SAL+ Sbjct: 196 SFEYGAIFESIALGRLEPWMITLAAILIFIGAMGKSGQFPLHTWLPDAMEG-PTPVSALI 254 Query: 247 -SGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLA 305 + MV G++ ++ L + L +V +G +A+ L ++DIKR+LA Sbjct: 255 HAATMVAAGVY-LVAATYPLFIASDTAL---TVVAYVGGFTAIFAASIGLTQRDIKRVLA 310 Query: 306 WSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISR 365 +STV +G +++A+GVA G + FHL+ HA FK LLFLGAG++I Sbjct: 311 YSTVSQLGYMMMALGVA-----------GAAGYVAGSFHLMTHAFFKALLFLGAGSVIHA 359 Query: 366 LHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEA--V 423 +HT ++ +MG L K+MP TA LIGCLAI+ I P GF S+ +++ R + + Sbjct: 360 VHTQNVFEMGGLWKKMPITALTFLIGCLAIAGIFPFAGFWSKEAILGAVYGAHRYDLLFI 419 Query: 424 ALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTM 474 AL A A M +++ +TF G R H EA E P M Sbjct: 420 ALLAAFFTAFYMF------------RLFFLTFAGKARGKH--EAHESPGVM 456 >UniRef50_C5EMF1 NADH dehydrogenase n=2 Tax=Clostridiales RepID=C5EMF1_9FIRM Length = 497 Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 111/347 (31%), Positives = 175/347 (50%), Gaps = 19/347 (5%) Query: 69 EFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVAL 128 E + L +D + + S + ++ +YS +YM +E GF++ I + ++AL Sbjct: 66 EHITVALAVDGVGRLFAALTSGIWLLVGIYSFSYM-THEKDEFRFFGFYL-IVLGVLIAL 123 Query: 129 LVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRE 188 N F V +EMM+L+S LV+ K ++ AG+ Y F + AG+ L + + Sbjct: 124 DFSANLVTFYVCYEMMTLTSLPLVLHEMTKEAVMAGLKYLFYSVAGAFLALFGIFYLYSV 183 Query: 189 SGSLDFASFRT-LSLSPGLASAVFLLA----FFGFGAKAGMMPLHSWLPRAHPAAPSHAS 243 + SL F + L +FL A GFG KAGM PLH WLP AHP AP+ AS Sbjct: 184 AESLTFTPGGVAMGLPANGHDGLFLGAVCCMLVGFGTKAGMFPLHGWLPTAHPVAPAPAS 243 Query: 244 ALMSGVMVKIGIFGILKVAMDLLAQTGL-PLWWGILVMAIGAISALLGVLYALAEQDIKR 302 A++SG++ K G+ +++VA ++ L W + M + ++ +G + A E +K+ Sbjct: 244 AVLSGLITKSGVLALIRVAYYIVGPDRLRGTWVQDVWMFLALLTVFMGSMLAYKEPVLKK 303 Query: 303 LLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAI 362 LA+STV V I+ +G L G +GAL H++ H+L K LFL AGA+ Sbjct: 304 RLAYSTVSQVSYIIFGLG-----------LFNGTGFVGALSHVVFHSLVKNGLFLAAGAV 352 Query: 363 ISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWY 409 I + +M L + MP + LA+ IPP +GF+S+WY Sbjct: 353 IFKTGWTRTSEMDGLGRVMPVMLGCYTLVSLALIGIPPASGFVSKWY 399 >UniRef50_D0L1N8 NADH/Ubiquinone/plastoquinone (Complex I) n=3 Tax=Proteobacteria RepID=D0L1N8_HALNC Length = 670 Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 158/548 (28%), Positives = 269/548 (49%), Gaps = 32/548 (5%) Query: 130 VMDNAFWFIVLFEMMSLSSWFLVIA-RQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRE 188 V D A ++ +E +SL +++A RQ ++S N + + GSV +++A +L+G++ Sbjct: 120 VQDGAN-LLIAWEALSLGGAIMLLAERQTESSGNDNLFMLALLEVGSVALLLAVILLGKQ 178 Query: 189 SGSLDFASF--RTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALM 246 L+F+S+ + L GL V +L GFGAK G++P + W P A+ A+M Sbjct: 179 ---LEFSSYAAQWQGLGTGLGFGVAVLWLIGFGAKLGLLPFYEWYPNAYGQGSGATGAIM 235 Query: 247 SGVMVKIGIFGILKVAMDLLAQTGLPLW---WGILVMAIGAISALLGVLYALAEQDIKRL 303 SG ++ + F + + +D L G P W +GI+V+ +GA +A+ +LYA + D +RL Sbjct: 236 SGAILNMAYFALGRALLDWL---GTPPWLGSFGIVVLLLGAFTAIFAILYAFQQNDWRRL 292 Query: 304 LAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAII 363 LA+S+ EN + + A+G A++ + L + L L HL+ H+L KG LF A A+ Sbjct: 293 LAFSSAENAAVAVTALGAALIFRAGGQAELAELAWLVGLLHLMGHSLAKGSLFFAADAVA 352 Query: 364 SRLHTHDMEKMGALAKRMPWT-AAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEA 422 ++ + + G L +R P+T + ++++A+PP GF+SEWY +QSLF + Sbjct: 353 RATGSYHIRQSGVL-RRAPFTLGIGVVFAGMSLAALPPTAGFVSEWYLFQSLFHDFTLHG 411 Query: 423 VALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLA 482 ++A +A +A+T +A+ VK+ G+ + + AQ + LL+ Sbjct: 412 DGPRIALALAGAGMALTAAIALATMVKVLGVGLLSKADARSGDAAQLTLSLGARIALLVT 471 Query: 483 ALCV-LIALSASWLAPKIMHIAHAFTNTPPATVAS----GIALVPGTFHTQVTPSLLLLL 537 L V +A+S + P+ ++ A T PPA AS G LVP + L L++ Sbjct: 472 GLAVPALAISLVFWLPQ-LNYAIWQTFEPPADAASLMVRGWLLVPLSADFAFISPLKLMI 530 Query: 538 LLAMPLLPGLYWLWCRS----RRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSA 593 ++ + L L +W R RRA G+ G A+A S N + R V+ Sbjct: 531 VMPLLALIPLALIWLRPRIKVRRAPIWCGGEPVQSHSGATTALAFS-NAMRVFYRFVYRP 589 Query: 594 LFRLRQQLDPTLR--LNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGD 651 + ++ D + K L A+A PF+ + +P V Q L + I LQ+G Sbjct: 590 TNAINRRFDADSKPYFLKTLEFDYAQA----PFFGPWLFQPAVRLVQALTRRILFLQNGL 645 Query: 652 FRLYCLYV 659 Y Y+ Sbjct: 646 MNAYLAYI 653 >UniRef50_B5IUC0 NADH-Ubiquinone/plastoquinone (Complex I), domain protein n=2 Tax=Thermococcus RepID=B5IUC0_9EURY Length = 620 Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 105/393 (26%), Positives = 194/393 (49%), Gaps = 49/393 (12%) Query: 132 DNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGS 191 D+ F + +E+M+ S+ +V+ K S+ YF ++ G+ ++IA ++ + G+ Sbjct: 120 DDLASFFIFWEIMTFGSFMMVLKYNRKASLK----YFLLSVFGAYAMLIAIGIIYAKVGA 175 Query: 192 LDFASFRTLSLSPGLASA--------------VFLLAFFGFGAKAGMMPLHSWLPRAHPA 237 LDFA+ + + VF L FG KAGM PLH W P A+ Sbjct: 176 LDFATIQQAFYQDAMRGTFGADTLFSRNDMLLVFGLFLVAFGVKAGMFPLHVWAPDAYSE 235 Query: 238 APSHASALMSGVMVKIGIFGILKVAMDL-------LAQTGLPLWWGILVMAIGAISALLG 290 +A+ SGV+ K G++G+L + + L + G +G ++ +G ++ ++G Sbjct: 236 TNQSYTAMFSGVLSKAGVYGMLVIYILLGTRLVYQFGRIGAAPKFGYIIALLGGLTIIVG 295 Query: 291 VLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHAL 350 L A ++DI++L A+S++ +G IL+ +GV T + + A++H ++HAL Sbjct: 296 GLLAALQEDIRKLFAYSSISQIGYILVGIGVG-----------TALSIEAAIYHAISHAL 344 Query: 351 FKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYT 410 FKGL FL I+ R + + MG LA++MP T A + L+++ IPPL GF S+W Sbjct: 345 FKGLFFLIVATIVLRTGKTEFKDMGGLAEKMPITFAMAFVAILSLAGIPPLVGFASKWLL 404 Query: 411 WQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKM-YGITFCGAPRSTHAEEAQE 469 ++++ + PI M+ + + ++ Y + F R T ++ ++ Sbjct: 405 FEAVIHENM----------PILGGMIFFGSAIGFVYLIRFTYAVWF--GQRPTELDDTKD 452 Query: 470 VPNTMIVAMLLLAALCVLIALSASWLAPKIMHI 502 P + +AM +LA L V+ ++ +A ++ I Sbjct: 453 APLPLAIAMGILALLNVVFGIAPGLVAKELNKI 485 >UniRef50_B1ZSF1 NADH dehydrogenase (Quinone) n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZSF1_OPITP Length = 493 Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 127/405 (31%), Positives = 209/405 (51%), Gaps = 34/405 (8%) Query: 23 FLLGLDRLAIKLSGI--TSLVGGVIGIISGITQLHAGVTLVARFAPPFEFADLTLRMDSL 80 FL+GL L + + V G + +++G +L V LVA E+ LR D+L Sbjct: 11 FLIGLAGLVARPRAVLEAGNVAGFVAVLAGGIELLRRV-LVAPGGAVTEWGGF-LRADAL 68 Query: 81 SAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFI------ASMVALLVMDNA 134 S +MVL+I+++ + S+Y++ Y R +GA F ++ M+ +++ +N Sbjct: 69 SVWMVLLIAIVSLATSVYAVGYFRRDLAEGAVNEHRFREFYVLTPLFATGMLVVVLANNL 128 Query: 135 FWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLL-----MGRES 189 V E +L+S LV KTS+ A Y + G VL + + + + Sbjct: 129 GVMWVAVEGTALASVLLVALYNRKTSLEAAWKYVMLGGVGLVLALFGTIFTYAAAIDKTG 188 Query: 190 G----SLDFASFRTLS--LSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHAS 243 G S +++S ++ L P L + F+ G+G KAG+ P+H WLP AH APS S Sbjct: 189 GAVMPSFNWSSLLAIAPQLDPSLVTLAFIFVLVGYGTKAGLAPMHPWLPDAHSEAPSPTS 248 Query: 244 ALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRL 303 A++SGV +KI ++ +L+ + A G + G +++ G S LL + L ++++KR+ Sbjct: 249 AMLSGVSLKIAVYALLRFHILTTACLGTQ-FSGRMLLGFGLGSMLLAGPFILVQKNLKRM 307 Query: 304 LAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAII 363 LA+S++E+VG+I +A+G L+ PL + GAL H+ HAL K +LF AG I Sbjct: 308 LAYSSLEHVGLICVAIG-------LNAPL----AVFGALLHMGYHALTKPVLFFAAGNIH 356 Query: 364 SRLHTHDMEKM-GALAKRMPWTAAACLIGCLAISAIPPLNGFISE 407 HT D ++ G L + MP TA +G +A+ +PP F+SE Sbjct: 357 QHCHTLDFRRLGGGLGRNMPVTAVVLGVGAVAVCGLPPFGLFVSE 401 >UniRef50_A1ALQ0 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ALQ0_PELPD Length = 639 Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 121/373 (32%), Positives = 186/373 (49%), Gaps = 32/373 (8%) Query: 72 DLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVM 131 D+ +D SA M LV++ + + LYS+ YM E + ++N+F+ M+ L++ Sbjct: 75 DVAFYLDQASAVMCLVVTGVGTLIHLYSVGYMSHDEDQPRYFA--YLNLFLFFMLMLVLG 132 Query: 132 DNAFWFIVLFEMMSLSSWFLV-IARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESG 190 N +E + L+S+ L+ QD AGM F + G ++A LL+ S Sbjct: 133 KNMIMLFAGWEGVGLASYLLIGFWYQDDEKSAAGMKAFIVNRVGDTGFVLAALLIFSYSH 192 Query: 191 SLDF----ASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALM 246 +LDF A F T L + + +L G K+ +PLH WLP A A P+ SAL+ Sbjct: 193 TLDFQGINAYFGTAGLPVSTMNLIGILLLIGACGKSAQIPLHVWLPDAM-AGPTPVSALI 251 Query: 247 -SGVMVKIGIFGILKVAMDLLAQTG--LPLWWGILVMAIGAISALLGVLYALAEQDIKRL 303 + MV G++ + ++ LL G + WG GA++A +G L + ++K++ Sbjct: 252 HAATMVTAGVYLLSRMNGVLLQAPGAMQVVMWG------GALTAFVGATMGLTQYNLKKV 305 Query: 304 LAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAII 363 LA+ST+ +G + +A G+ A+FHL +HA FK LFLGAGA++ Sbjct: 306 LAYSTMSQIGYMFMACGLG--------------SFSAAMFHLYSHAFFKACLFLGAGAVL 351 Query: 364 SRLH-THDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEA 422 LH DM KMG LAK+MP T L G LA+ +PP GF S+ S F+ + + Sbjct: 352 HALHGEEDMRKMGGLAKKMPLTFVTFLAGSLALCGVPPFAGFFSKDEILWSAFASAHGGS 411 Query: 423 VALQLAGPIAMVM 435 AL L G +A M Sbjct: 412 TALWLVGAVAAGM 424 >UniRef50_A7BZE9 NADH dehydrogenase subunit N n=3 Tax=Gammaproteobacteria RepID=A7BZE9_9GAMM Length = 614 Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 113/374 (30%), Positives = 195/374 (52%), Gaps = 36/374 (9%) Query: 124 SMVALLVMDNAFWFIVLFEMMSLSSW--FLVIARQDKTSINAGMLYFFIAHAGSVLIMIA 181 +++A+L++ ++ F+ LF L SW +L++ + +A Y A G++ I+ Sbjct: 111 NVLAMLILLSSGDFLSLFIGWELVSWASYLIMTHPGGKAADAAFRYLIYAMGGAMAILAG 170 Query: 182 FLLMGRESGSLDFASFRTL--SLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAP 239 +L+ + GSLD+ASF +LS G+ A+ LL GF K MMP H W A+ P Sbjct: 171 IVLIYLQVGSLDYASFWAAIPNLSTGVLWALVLLIGGGFSVKMAMMPFHLWQAAAYAYTP 230 Query: 240 SHASALMSGVMVKIGIFGI----LK-VAMDLLAQTGLPLWW----GILVMAIGAISALLG 290 +A +S V ++G+F I LK + +D L + +P + G+L+ I A++A++ Sbjct: 231 GANAAFVSAVAARMGLFAIALVLLKPIGIDRLTEMAIPFTFLDARGLLIW-IAALTAIIP 289 Query: 291 VLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHAL 350 AL + D + LLAW + G++L+ + +A T +G+ G L H+ N+A Sbjct: 290 TYIALQQNDARLLLAWHGIGQGGLMLMGILIA-----------TPMGVAGGLMHIFNYAT 338 Query: 351 FKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYT 410 ++ LFL A+I R T D++++G L +MP T A L+G + ++ +PP+NGF+S+W Sbjct: 339 YQAALFLAVTAVIYRTGTADLDRLGGLIVKMPLTYIALLMGIIGLAGLPPMNGFVSKWLM 398 Query: 411 WQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEV 470 +++L P+ +V +++ ++ K+ F G R H E +EV Sbjct: 399 YKALLDAEM----------PLLLVAASISTLGTILSVYKLIHNMFLGQLRKEH-YEVKEV 447 Query: 471 PNTMIVAMLLLAAL 484 P TM V ML LA + Sbjct: 448 PWTMTVPMLALAGI 461 >UniRef50_Q0W6M6 Predicted oxidoreductase integral membrane component (CooM/NuoL-like) n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W6M6_UNCMA Length = 481 Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 128/437 (29%), Positives = 216/437 (49%), Gaps = 48/437 (10%) Query: 67 PFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMR--EYEGKGAAA----MGFFMNI 120 P + LTL D+ + V+ L + YS Y R +Y+ AA MGF Sbjct: 59 PLSYGPLTL--DASGMLISTVVCFLGTLVMFYSFAYKRRPQYDSTYFAAYLMMMGF---- 112 Query: 121 FIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMI 180 M L N ++ E ++ S LV+ + K SI A +Y I+ +L+M Sbjct: 113 ----MSGLACSSNVVIMLIFLEASTVISAVLVLFGRTKRSIQAATVYLTISIFEVLLVMY 168 Query: 181 AFLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFG-AKAGMMPLH-SWLPRAHPAA 238 ++ +GS D + ++SL P + L F KAG++PL WLP AH A Sbjct: 169 GAFILYNHTGSFDVLT--SMSLIPDSDKFLLALLFLFGFGTKAGLLPLGLIWLPPAHSEA 226 Query: 239 PSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQ 298 P SA MSG+++ + +++ +G ++V+ GA++ ++G++ AL ++ Sbjct: 227 PPPISATMSGILISASVIAMIRAVYPFYGSSGFDTLM-LIVVGFGALNLIVGMIMALFQE 285 Query: 299 DIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLG 358 D+KR+LA+S++ +G I++ +G+A T +G GALFH+ NH LFKG LFL Sbjct: 286 DLKRVLAYSSISQMGYIIMGLGLA-----------TTLGAYGALFHITNHMLFKGALFLI 334 Query: 359 AGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLS 418 +GA+I ++T + KMG L KRMP TA I LA++ +P LNG +S+ Sbjct: 335 SGALILGVNTRQLHKMGGLWKRMPITAICFAIAGLAMAGLPFLNGAVSK----------G 384 Query: 419 RVEAVALQLA----GPIAMVMLAVTGGLAVMCFV-KMYGITFCGAPRSTHAEEAQEVPNT 473 +E ++ A G L + G + ++ + + + F G + E++ + P Sbjct: 385 AIEEATMEAAHLWWGYEWFAYLQILGSIVTFAYLFRAFYLIFLGKEKPGF-EKSSDPPLY 443 Query: 474 MIVAMLLLAALCVLIAL 490 M++ +L++ ALCV++ L Sbjct: 444 MLLPILIMVALCVILGL 460 >UniRef50_C1A8Y3 NADH-quinone oxidoreductase chain L n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A8Y3_GEMAT Length = 674 Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 140/457 (30%), Positives = 221/457 (48%), Gaps = 65/457 (14%) Query: 72 DLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVM 131 D ++D LS MVLVI+ + + L+S+ YM++ G A ++N+F+A M+ L++ Sbjct: 89 DWNFQLDQLSMLMVLVITGVGSLIHLFSIGYMQDDPGY--ARYFAYLNLFVAFMLVLVLG 146 Query: 132 DNAFWFIVLFEMMSLSSWFLV-IARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESG 190 + V +E + L+S+ L+ DK + +AG F + G ++A L+ + Sbjct: 147 GSYPVMFVGWEGVGLASYLLIGFWFSDKANADAGKKAFVVNRVGDFGFLVAMFLIWVTTQ 206 Query: 191 SLDFASFRTLSLSPG-----LASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASAL 245 LDF ++ G LA A+FL F G K+ +PL+ WLP A A P+ SAL Sbjct: 207 HLDFVGAHSVLGGMGGTPVVLAIALFL--FVGCAGKSAQLPLYIWLPDAM-AGPTPVSAL 263 Query: 246 M-SGVMVKIGIFGILKVAMDLLAQTGLPLWWG-----ILVMAIGAISALLGVLYALAEQD 299 + + MV G++ + + A P++ G +++ AIGA++AL AL + D Sbjct: 264 IHAATMVTAGVYLVARAA---------PIFAGAPEASLVITAIGALTALFAATIALRQWD 314 Query: 300 IKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGA 359 IK++LA+STV +G + +AVG +FHL+ HA FK LLFLGA Sbjct: 315 IKKVLAYSTVSQLGYMFVAVGSG--------------AYTAGVFHLVTHAFFKALLFLGA 360 Query: 360 GAIISRL-----------HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEW 408 G++I + D+ MG LA+ MP TA A + LAI+ +PPL GF S+ Sbjct: 361 GSVIHAMHHAYHHTHRHDDPQDLRNMGGLARFMPATAGAMTLATLAIAGVPPLAGFFSKD 420 Query: 409 YTWQSLFSLSRVE--AVALQLAGPIAMVMLA------VTGGLAVMCFVKMYGITFCGAPR 460 +F+ + A A L P + V+ A +T L + +M + F G R Sbjct: 421 EILAGVFARAHDSPLANASLLGIPGSTVLYAAYGIGILTALLTAIYMTRMLLLAFYGENR 480 Query: 461 STHAEEA--QEVPNTMIVAMLLLAALCVLIALSASWL 495 + AE + E P M +L+L L L+ WL Sbjct: 481 TGEAERSALHEAPLIMTAPVLILGVLT----LAGGWL 513 >UniRef50_B3QXL9 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QXL9_CHLT3 Length = 643 Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 128/428 (29%), Positives = 211/428 (49%), Gaps = 45/428 (10%) Query: 73 LTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMD 132 +T R+DSLS M LV++ + + +YS+ YM + K A ++N+FI +M+ L++ + Sbjct: 87 ITYRIDSLSLLMGLVVTGVGSLIHIYSIGYM--HGDKDFARFFSYLNLFIFAMMNLILAE 144 Query: 133 NAFWFIVLFEMMSLSSWFLVIARQDKT--------SINAGMLYFFIAHAGSVLIMIAFLL 184 + + +E + L S+ L+ DK + NA F + G ++IA L Sbjct: 145 SMPLMFLGWEGVGLCSYLLIGFWYDKKFDGVGITWTGNAANKAFIVNRIGDFAMLIAMFL 204 Query: 185 MGRESGSLDFASFRT--LSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHA 242 + + G LDF + SL GLA + LL F G K+ +PL WLP A A P+ Sbjct: 205 IFQNIGRLDFTGILSGAASLDAGLAFWITLLIFIGSTGKSAQIPLFVWLPDAM-AGPTPV 263 Query: 243 SALM-SGVMVKIGIFGILKVA-MDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDI 300 SAL+ + MV GI+ I +++ + LLA + + + +G ++A++ + + DI Sbjct: 264 SALIHAATMVTSGIYLIARLSPLFLLAPETMHI-----IAVVGTLTAIMAGTIGIVQNDI 318 Query: 301 KRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAG 360 K++LA+STV +G + LA+G+ A+FH+ HA FK LFLG+G Sbjct: 319 KKVLAYSTVSQLGYMFLALGIGAFST--------------AIFHVATHAFFKACLFLGSG 364 Query: 361 AIISRLH-THDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSR 419 ++I +H D+ KMG L K+MP TA LI A++ P GF FS Sbjct: 365 SVIHGMHEEQDIRKMGGLFKKMPSTAITFLIATFALAGFPLTAGF----------FSKDA 414 Query: 420 VEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAML 479 + A A + + +T + +++Y +TF G PR + E P M + + Sbjct: 415 ILAAAFGSHNTLLYGVGVLTAVITAFYSMRLYTLTFLGNPRWSEHAHPHESPAVMTLPLW 474 Query: 480 LLAALCVL 487 +LAAL ++ Sbjct: 475 VLAALSLV 482 >UniRef50_P77437 Hydrogenase-4 component F n=52 Tax=Bacteria RepID=HYFF_ECOLI Length = 526 Score = 149 bits (376), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 111/357 (31%), Positives = 184/357 (51%), Gaps = 30/357 (8%) Query: 71 ADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAA-------MGFFMNIFIA 123 A L L +D L + ++ ++ + +YS+ YMR G + GFF ++F+ Sbjct: 66 AGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFF-HLFLF 124 Query: 124 SMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFL 183 +M+ ++ +N E +LSS FLV ++S+ A Y I G + + Sbjct: 125 TMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTV 184 Query: 184 LMGRESGSL----DFASF--RTLSLSPGLASAVFLLAF----FGFGAKAGMMPLHSWLPR 233 L+ + S+ + A F L S L + LLAF GFG K G+ P+H+WLP Sbjct: 185 LVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPD 244 Query: 234 AHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLY 293 AH APS SAL+S V++ + +++ + + G + L++ G +S + + Sbjct: 245 AHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSD-FPNRLLLIFGMLSVAVAAFF 303 Query: 294 ALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKG 353 L ++DIKRLLA+S+VEN+G++ + +G+ PL G+ AL H+LNH+L K Sbjct: 304 ILVQRDIKRLLAYSSVENMGLVAVELGIG-------GPL----GIFAALLHILNHSLAKT 352 Query: 354 LLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYT 410 LLF G+G ++ + T D+ + + K MP+TA G LA++ +PP N F+SE+ T Sbjct: 353 LLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMT 409 >UniRef50_Q24ST7 Hydrogenase-4 component F n=3 Tax=Desulfitobacterium RepID=Q24ST7_DESHY Length = 499 Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 114/347 (32%), Positives = 178/347 (51%), Gaps = 29/347 (8%) Query: 78 DSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMG------FFMNIFIASMVALLVM 131 D+LSA ++ VI ++ +YS +YM G F++ +FI +M+ ++ Sbjct: 60 DALSALLLGVIVVIAAYVIVYSFSYMEHEVAAGKVPQSRLPRYYFWVWMFIGTMLWVVST 119 Query: 132 DNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGS 191 N V E +L++ LV + KT++ A Y + G ++ +++ SG Sbjct: 120 PNLGLLWVGIEGTTLATALLVGFYRQKTAVEAAWKYIVLCTVGISFALLGTMILYAASGR 179 Query: 192 LDFASFRTLS----------LSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSH 241 ++ S L L P L + AF G+GAK G +P+H WLP AH APS Sbjct: 180 INGYSLAALDWRLLVGMAPQLDPALVKLGCIFAFIGYGAKVGFVPMHPWLPDAHSQAPSP 239 Query: 242 ASALMSGVMVKIGIFGILKVAMDLLAQTGL-PLWWGILVMAIGAISALLGVLYALAEQDI 300 SAL+SGV++ ++ IL+ + L+ QTGL P + G L++ G IS + + L ++DI Sbjct: 240 VSALLSGVLLNCALYAILRWHI-LVRQTGLGPDFSGKLLLVFGLISLGAMMAFILLQKDI 298 Query: 301 KRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAG 360 KRLLA+S+VE++GII L GL L PL + GA FHL+ HAL K LF+ G Sbjct: 299 KRLLAYSSVEHMGIIAL-------GLGLGTPL----AVWGACFHLILHALTKANLFVVVG 347 Query: 361 AIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISE 407 ++ + T + K+ + P+T +G LAI+ +PP F SE Sbjct: 348 RVVQMMGTRQIPKIRGVMSLWPYTGGILFMGLLAITGMPPFGTFRSE 394 >UniRef50_C5VLQ3 NADH dehydrogenase subunit 5 n=10 Tax=Bacteroidales RepID=C5VLQ3_9BACT Length = 684 Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 136/466 (29%), Positives = 221/466 (47%), Gaps = 66/466 (14%) Query: 72 DLTLRMDSLSAFMVLVISLLVVVCSLYSLTYM---------REYEGKGAAAMGFFMNIFI 122 ++ R+ +S M++VI+ + ++ +YS YM EYE G ++++F Sbjct: 99 NIGFRLSPISVMMLIVITTVSLMVHIYSFGYMAERDENYKFEEYE-HGFQRFYAYLSLFT 157 Query: 123 ASMVALLVMDNAFWFIVLFEMMSLSSWFLV-IARQDKTSINAGMLYFFIAHAGSVLIMIA 181 SM+ L+V N F + +E++ + S+ L+ T+++A F + + +I Sbjct: 158 MSMLGLVVATNIFQMYLFWELVGVCSYLLIGFYYPKHTAVHASKKAFIVTRFADLFFLIG 217 Query: 182 FLLMGRESGSLDFASFRTLSLSPGLA-----------------SAVFLLAFFGFGAKAGM 224 L G+ ++ L+++PGL +A+FL+ F G K+ M Sbjct: 218 ILFFSFYVGTFNY----DLNVNPGLVETLNGLAKNPHLTWVLPTALFLM-FIGGAGKSAM 272 Query: 225 MPLHSWLPRAHPAAPSHASALM-SGVMVKIGIFGI---LKVAMDLLAQTGLPLWWGILVM 280 PLH WLP A P+ SAL+ + MV G+F + L + + AQ L W + Sbjct: 273 FPLHIWLPDAM-EGPTPVSALIHAATMVVAGVFQVASLLPIYVQFGAQEQLH--W---IA 326 Query: 281 AIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTV----- 335 I A +A A A++DIKR LA+ST+ + +L+A+GV H + Sbjct: 327 WIAAFTAFYAAAVACAQRDIKRGLAFSTISQIAYMLVALGVCFYEKE-HGSFYSAEYLHH 385 Query: 336 --VGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCL 393 +G + A+FHL HA+FK LLFL +GAII + ++ E MG L K MP T LIGCL Sbjct: 386 GGLGYMAAMFHLFTHAMFKALLFLCSGAIIVIIGSNFKEYMGGLHKYMPITNICFLIGCL 445 Query: 394 AISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGI 453 AI+ IPP GF S+ + +L VE AL+ ++ + G+ ++Y + Sbjct: 446 AIAGIPPFAGFFSKDEIISACNALPGVEGQALKW-------IMTLVAGMTAFYMFRLYYV 498 Query: 454 TFCGAPRSTHAEEA----QEVPNTMIVAMLLLAALCVLIALSASWL 495 F G E QEVP M ++ LA +I+++A W+ Sbjct: 499 IFWGESYYEQDPENRRRPQEVPFVMWGPLVFLA----IISITAGWI 540 >UniRef50_A8RP35 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RP35_9CLOT Length = 495 Score = 148 bits (374), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 109/349 (31%), Positives = 180/349 (51%), Gaps = 27/349 (7%) Query: 72 DLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVM 131 +L LRMD A + SL+ V+ ++ YM E+E + A F I S+ AL + Sbjct: 67 ELCLRMDGTGALFSGLASLIWVLVVFFAFEYM-EHEKEDAR----FFGCLIMSLGALTGV 121 Query: 132 DNAFWFIVL---FEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRE 188 A F+ L FEMM+ S LV + + ++ AGM+Y + G+ + + + + Sbjct: 122 AWAGNFVTLYLFFEMMTFFSVPLVFHSRMREALRAGMVYLAYSMLGASIALGGYFFFRQY 181 Query: 189 SGSLDFASFRTLSLSPGLASA---VFLLAFF----GFGAKAGMMPLHSWLPRAHPAAPSH 241 + DF + L+ + G+ + LLA F GF KAG+MPLH WLP AHP AP+ Sbjct: 182 ACGTDFKAGGVLTEAAGMVQGRPQILLLAVFCMAAGFSCKAGLMPLHPWLPIAHPVAPAP 241 Query: 242 ASALMSGVMVKIGIFGILKVAMDLLAQTGLP-LWWGILVMAIGAISALLGVLYALAEQDI 300 ASA++SG++ K G+ +++V ++ L W ++++ ++ G + A E+ + Sbjct: 242 ASAVLSGLITKAGVVAVIRVVYNMAGPAFLRGTWVQYALLSMAVVTIFTGSMLAYKEKKL 301 Query: 301 KRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAG 360 KR LA S+ V +LL V LL++ GL G+L ++ HAL K LFL AG Sbjct: 302 KRRLACSSFSQVSYVLLGVF-----------LLSMEGLYGSLLQVVFHALAKNALFLCAG 350 Query: 361 AIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWY 409 A+I + ++++ + KRMP + L++ IPP GF+++W+ Sbjct: 351 AVICKTGCTRVKELRGMGKRMPAVMVCFALASLSLVGIPPAGGFLAKWH 399 >UniRef50_C1SM60 NADH dehydrogenase subunit L n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SM60_9BACT Length = 638 Score = 148 bits (374), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 125/434 (28%), Positives = 210/434 (48%), Gaps = 53/434 (12%) Query: 77 MDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFW 136 +D LS+ M++V++ + ++ +YS+ YM + G ++++F SM+ L++ +N Sbjct: 79 VDPLSSIMLIVVTTISLMVHIYSIGYM--HGDPGFWRFFTYLSVFTLSMLVLVLGNNFLM 136 Query: 137 FIVLFEMMSLSSWFLV-IARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDF- 194 V +E++ LSS+ L+ K++ +A F + G I LL+ S+++ Sbjct: 137 LFVGWELVGLSSYLLIGFWFHKKSAADACKKAFVMNRIGDFGFYIGLLLVIVTFRSVNYS 196 Query: 195 -------------ASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSH 241 A F + L + F G K+ PLH+WLP A P+ Sbjct: 197 DAFNSEAIHHIKEAGFMLFGMKVSLIDLMTFGLFCGAMGKSAQFPLHTWLPDAMEG-PTP 255 Query: 242 ASALM-SGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDI 300 SAL+ + MV G++ + + L ++ + ++ GA++A LG L + D+ Sbjct: 256 VSALIHAATMVTAGVYMVARCN-ALFSEAHMT---SQFIVFAGAMTAFLGASIGLTQYDL 311 Query: 301 KRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAG 360 KR+LA+STV +G +++A GV + A+FHL HA+FKGLLFL +G Sbjct: 312 KRILAYSTVSQLGYMIMATGVG--------------AYVAAIFHLFTHAMFKGLLFLCSG 357 Query: 361 AIISRLHTH-DMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSR 419 +++ +H D+ MG L K+MP+T LIGC+AI+ IPPL GF W S+ Sbjct: 358 SVMHAMHDQLDVRLMGGLKKKMPFTHWTYLIGCIAIAGIPPLAGF---W---------SK 405 Query: 420 VEAVALQLAG--PIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTH-AEEAQEVPNTMIV 476 E +A+ A IA + G+ + Y + F G PR H + A E P +M Sbjct: 406 DEILAMTFASGHNIAWFVGTAVAGMTAFYMFRSYFLVFQGTPRDQHLHDHAHESPFSMWG 465 Query: 477 AMLLLAALCVLIAL 490 ++ LA L + + L Sbjct: 466 PLVFLAFLSIFVGL 479 >UniRef50_Q7NHD8 NADH dehydrogenase subunit 5 n=1 Tax=Gloeobacter violaceus RepID=Q7NHD8_GLOVI Length = 605 Score = 148 bits (373), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 144/441 (32%), Positives = 224/441 (50%), Gaps = 45/441 (10%) Query: 53 QLHAGVTLVARFAPPFEFADLTLR----MDSLSAFMVLVISLLVVVCSLYSLTYMREYEG 108 ++ AG RF P +F L + ++ L+A +++++ + ++ LYSL YM ++E Sbjct: 57 EVLAGAGGTFRF-PWIDFGTLNIEVSGLINPLTAGTLVLVAGVSLLVQLYSLGYM-DHEP 114 Query: 109 KGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYF 168 + A G ++ F +M+ L++ DN +E+M LSS+ LV K + A Sbjct: 115 RLARYYGL-LSFFTMAMLGLVLSDNLLAMYGFWELMGLSSYLLVGFWWSKPAAAAAAKKA 173 Query: 169 FIA-HAGSVLIMIAFLLMGRESGSLDFASF----RTLSLSPGLASAVFLLAFFGFGAKAG 223 F+ G L++I LL+ +G+L+ + T +++ LA+ + LL F G K+ Sbjct: 174 FLTTRVGDFLLLIGILLLYVNAGTLEITALGEWAETATIAAPLATLIVLLLFAGPVGKSA 233 Query: 224 MMPLHSWLPRAHPAAPSHASALM-SGVMVKIGIFGILKVA-MDLLAQTGLPLWWGILVMA 281 PLH WLP A P+ ASAL+ + MV G+F + ++ + L+ T L ++V Sbjct: 234 QFPLHVWLPDAMEG-PTPASALIHAATMVAAGVFMVARLEPVFALSSTAL-----MVVAY 287 Query: 282 IGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGA 341 GAI+AL L A A+ DIKR+LA+ST+ +G + +A+GV A Sbjct: 288 TGAITALGSALMATAQNDIKRVLAYSTISQLGYMFMALGVGNTE--------------AA 333 Query: 342 LFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPL 401 +FHL HA FK +LFLGAG++I HT DM +MG L RMP TA IG LA++ + P Sbjct: 334 MFHLFTHAFFKAMLFLGAGSVIHGAHTQDMREMGGLMGRMPVTAFTYGIGVLALAGVFPF 393 Query: 402 NGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRS 461 GF W L +L + E L AM +L T GL + Y + F G P S Sbjct: 394 AGF---WSKDAILHALEKAE-----LYPVFAMGLL--TAGLTAFYMARQYILVFLGKP-S 442 Query: 462 THAEEAQEVPNTMIVAMLLLA 482 + A E TM + +++LA Sbjct: 443 EKSSRAHESTWTMSLPLVILA 463 >UniRef50_A7GV43 Proton-translocating NADH-quinone oxidoreductase, chain L n=8 Tax=Bacillaceae RepID=A7GV43_BACCN Length = 620 Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 142/505 (28%), Positives = 238/505 (47%), Gaps = 71/505 (14%) Query: 9 WSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAPPF 68 W + L+ AS L L G KL GI+SL+G + +S + A + L+ RF+ Sbjct: 6 WLIPLFPLASFMLLILFGR-----KLKGISSLLGSLFAFLSLVG---AVIVLLERFSSEN 57 Query: 69 ----------EFADLTL--RMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGF 116 D++ +++L+A M+L+++ + + +Y+ YM+ E + Sbjct: 58 VKHTWLWLKAGSVDISFGFEVNALNALMLLIVTTVSFLVHVYAKGYMQGDER--LSVFYA 115 Query: 117 FMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLV-IARQDKTSINAGMLYFFIAHAGS 175 ++ +F +M+ L++ N V +E++ L S+ L+ + + A F + G Sbjct: 116 YLGLFTFAMLGLVISTNLLQLYVFWELVGLGSFLLIGFYFFKEEAKAAAQKAFIMTRIGD 175 Query: 176 VLIMIAFLLMGRESGSLD----FASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWL 231 + I +L+ ++GS D F + +T ++SP + + L F G K+G PLH+WL Sbjct: 176 ACLFIGMILLFWQAGSFDYDVIFKAVQTEAISPSIITLTALFIFIGAVGKSGQFPLHTWL 235 Query: 232 PRAHPAAPSHASALM-SGVMVKIGIFGI-----LKVAMDLLAQTGLPLWWGILVMAIGAI 285 P A P+ SAL+ + MV G++ + L VA + QT V +G Sbjct: 236 PDAMEG-PTPVSALIHAATMVAAGVYLVAAMFPLFVASPVAMQT---------VAIVGGF 285 Query: 286 SALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHL 345 +A+ AL + DIKR+LA+STV +G ++LA+G A G + ++FHL Sbjct: 286 TAIFAASIALVQTDIKRILAYSTVSQLGYMMLALGSA--------------GYVASIFHL 331 Query: 346 LNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFI 405 HA FK LLFL AG++I +HT ++ +MG L K+M T L+G AIS +P +GF Sbjct: 332 TTHAFFKALLFLAAGSVIHAVHTQNIHEMGGLQKKMKVTGLLFLVGTFAISGVPFFSGF- 390 Query: 406 SEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGG-LAVMCFVKMYGITFCGAPRSTHA 464 FS + +A + G + +LA+ L ++Y + F G R+ Sbjct: 391 ---------FSKDEI-LMATWMHGNYVLFVLAILATFLTSFYMFRLYFLVFTGEERAK-- 438 Query: 465 EEAQEVPNTMIVAMLLLAALCVLIA 489 E +E P M + M L V I Sbjct: 439 REVRESPRIMTLPMTALGVFAVAIG 463 >UniRef50_A9BJM0 NADH dehydrogenase (Quinone) n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BJM0_PETMO Length = 613 Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 118/409 (28%), Positives = 197/409 (48%), Gaps = 38/409 (9%) Query: 139 VLFEMMSLSSWFLV-IARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASF 197 + +EM+ SS F++ + + K S+ +Y+ I+ GS + A + + + D S Sbjct: 128 IFWEMVVWSSLFIIPLGKSRKASV----VYYTISTIGSFSMFFAIMYLYSLFQTFDIESI 183 Query: 198 -RTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIF 256 + L SP A + + AK G+ P H+WLP AH AP S ++SG +VK+G F Sbjct: 184 SQNLISSPNTAVMAYFVIIIAGLAKLGIFPFHTWLPIAHGNAPHTFSPVLSGGLVKMGAF 243 Query: 257 GIL---------KVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWS 307 L ++ + + G+P + ++M +GAIS ++G L A+ ++D KRL+A+S Sbjct: 244 IALLVSAIIPTSQIFSNHIHIIGVP-YENYIIMVLGAISIIVGTLMAIKQEDAKRLIAYS 302 Query: 308 TVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLH 367 TV N G IL +G+SL D VG G + H+ NHA+ +FL GA+ R Sbjct: 303 TVANGGYIL-------IGISLLDQ----VGFAGGMMHIFNHAMASAAMFLTIGAVAYRTG 351 Query: 368 THDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQL 427 T +M ++G + K+MP T AA L+ ++I+ IPP +GF S+W +Q L S + Sbjct: 352 TTNMSELGGMIKKMPVTFAAYLVAIISIAGIPPTSGFASKWLIFQGLASKGLMFIAFATF 411 Query: 428 AGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVL 487 G I + M + F G H + +EVP M + ML+++ L + Sbjct: 412 FGSIG----------SFMYVFRPLATVFLGQLSPKH-NDVKEVPFMMQIPMLVMSLLTIY 460 Query: 488 IALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLL 536 + S + I I + P + S I G + + V ++ ++ Sbjct: 461 FGVFPSQMLGFISKIQASLNIVPISVEGSKIYSFSGMWDSLVITAVFVI 509 >UniRef50_A4E716 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E716_9ACTN Length = 521 Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 127/428 (29%), Positives = 203/428 (47%), Gaps = 48/428 (11%) Query: 75 LRMDSLSAFMVLVISLLVVVCSLYSLTYMR----EYEGKGAAAMGFF--MNIFIASMVAL 128 L +DSLS+ VL++ ++ + +YS++Y++ E ++ ++F+ +M+ Sbjct: 69 LHLDSLSSIFVLLVGIIGFITGVYSISYIKIDIKEKTMPAERTKQYYALFSLFVFTMLLA 128 Query: 129 LVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRE 188 + +N E +LS+ FLV ++K ++ A Y + AG + LL+ Sbjct: 129 CLSNNIILTWAAVEATTLSTVFLVGIYKNKQALEASWKYAMVCTAGVAFGLFGTLLIYAN 188 Query: 189 SGSL----DFASFRTL------SLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAA 238 + + A+F T P L F GFG KAG+ P+H+WLP AH A Sbjct: 189 AADIMPNAHEAAFLTSIMPYADQFDPMLVRLAFAFIVIGFGTKAGLFPMHTWLPDAHSQA 248 Query: 239 PSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQ 298 PS SAL+SGV++K + I++ + G + L++ +G +S L+ L + Sbjct: 249 PSPVSALLSGVLLKCAMLVIIRFYSLSIITVG-DTYPRTLLLILGTLSILVAALCIFKQD 307 Query: 299 DIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLG 358 DIKR A+S+V+NVG++ L +G+ PL G+ L H + H K L F Sbjct: 308 DIKRRFAYSSVDNVGVVALCLGIG-------GPL----GIAACLLHCIFHGFTKALAFCM 356 Query: 359 AGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLS 418 AG I HT D+ K+ + + P TAA +I LA++A PP FISE+ T+ Sbjct: 357 AGNIQHIYHTRDLNKIKGVVEIAPVTAALTIIALLALAAFPPFALFISEFLTF------- 409 Query: 419 RVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGIT----FCGAPRSTHAEEAQEVPNTM 474 VA +GPI +V+L G V + + GI F AP + EVP M Sbjct: 410 ----VAGIQSGPIWVVVLVAIGLTGV--YFALTGIALKSIFGKAPEGM---KRHEVPALM 460 Query: 475 IVAMLLLA 482 I+ + LA Sbjct: 461 IIPEIALA 468 >UniRef50_B1ZUJ9 NADH dehydrogenase (Quinone) n=6 Tax=Bacteria RepID=B1ZUJ9_OPITP Length = 592 Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 128/429 (29%), Positives = 206/429 (48%), Gaps = 59/429 (13%) Query: 76 RMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGA--AAMGFFMNIFIASMVALLVMDN 133 R+D+LS+ ++ L+ ++ SL+ L R+ E A G IF ++ L + Sbjct: 64 RVDALSSVFGYIMGLMAIIGSLFGLHVKRDTEHMAAWTYVAGSLGAIFAGDLLTLFL--- 120 Query: 134 AFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLD 193 FW E+M+ SS FL+ R + S+ +G Y + AG V ++ +L + S Sbjct: 121 -FW-----EIMAFSSVFLIWFRGRQESLASGYRYLLVHVAGGVSLLAGIILHYAATHSFA 174 Query: 194 FASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKI 253 F F +L LA + L+ GF A + PLH+WLP A+ A + S M K Sbjct: 175 FNLFNVENLQ--LADWLILI---GFLVNAAVPPLHAWLPDAYGEATFNGSVFMCAFTTKT 229 Query: 254 GIFGILK--VAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVEN 311 ++ +++ D+L +A+G + AL GV+YA+ E D +RLLA+ + Sbjct: 230 AVYALIRGFAGTDIL-------------IALGVVMALYGVVYAVLENDSRRLLAYHIISQ 276 Query: 312 VGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDM 371 VG ++ VG+ T + + GA+ H H L+KGLLF+G G+++ Sbjct: 277 VGYMVAGVGLG-----------TELAINGAVAHAFAHILYKGLLFMGCGSVLYMTGKSKF 325 Query: 372 EKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPI 431 ++G L ++MPWT LIG L+ISA P +GF+S +S+ + E L + Sbjct: 326 TELGGLYQKMPWTFLFTLIGGLSISAFPLFSGFVS-----KSMIVAAGFEDHKLWVG--- 377 Query: 432 AMVMLAVTG-----GLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCV 486 ++MLA G GL V F+ +G C AP + + A+E P MI AM + + LC+ Sbjct: 378 FLLMLASAGTFLHTGLKVPYFI-WFGKNNC-APETW--QRAKEPPANMIAAMAITSFLCI 433 Query: 487 LIALSASWL 495 I +L Sbjct: 434 FIGCYTPYL 442 >UniRef50_A6LXP7 Proton-translocating NADH-quinone oxidoreductase, chain L n=8 Tax=cellular organisms RepID=A6LXP7_CLOB8 Length = 617 Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 135/496 (27%), Positives = 236/496 (47%), Gaps = 64/496 (12%) Query: 15 LFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAPPFEFA--- 71 +F ++A L + + + + +S ++ G V+ I + + +T P E+A Sbjct: 12 VFPAIAFLIIGFITKKSKVISSAIAIGGMVLSFIFSLGVFYEVITSKVSINKPVEYAVSW 71 Query: 72 -------DLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNI--FI 122 ++ + +D L+A M+++++ + ++ +YSL YM+ +G FF N+ F Sbjct: 72 LSAPIKIEVGVLIDPLTATMLIIVTFIGLLVEIYSLGYMKGEKGFSR----FFANLSLFT 127 Query: 123 ASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTS-INAGMLYFFIAHAGSVLIMIA 181 +SM+ L++ +N F +E++ L S+ L+ D+ S + A F G ++ Sbjct: 128 SSMLGLVISNNYFQMFFFWELVGLCSYLLIGFYYDRPSAVKANKKAFVANRVGDFGFLVG 187 Query: 182 FLLMGRESGSLDFASFRTLSLS-PGLASAVFL-----LAFFGFGAKAGMMPLHSWLPRAH 235 L + G+ +F R L+ S P V+L L F G AK+ PLH WLP A Sbjct: 188 MLCLFMAFGTFNF---RELAASIPAYQDVVYLTIIALLIFAGPVAKSAQFPLHVWLPDAM 244 Query: 236 PAAPSHASALM-SGVMVKIGIFGILK--VAMDLLAQTGLPLWWGILVMAIGAISALLGVL 292 P+ SAL+ + MV G++ + + + L + L ++ IG I+A + Sbjct: 245 EG-PTPVSALIHAATMVAAGVYLLARGYILFSSLHEVSL------VIAYIGGITAFMAGT 297 Query: 293 YALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFK 352 A+ ++D+KR+LA+ST+ +G +++A+GV G +FHL +HA FK Sbjct: 298 IAIVQRDLKRILAFSTMSQLGYMVMAMGVG--------------GFTSGMFHLTSHAFFK 343 Query: 353 GLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQ 412 LLFLGAG+II + D+ KMG L K+M + +I L+++ IPPL+GF Sbjct: 344 ALLFLGAGSIIHSIGVQDIFKMGGLIKKMKLVSITFIIASLSLAGIPPLSGF-------- 395 Query: 413 SLFSLSRVEAVALQLAGPIAMVMLA-VTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVP 471 FS + V + G I + L +T L ++ I F G R H+ + P Sbjct: 396 --FSKDEILTVTYE-HGYIFLYYLGLITAFLTAFYMARLVLIVFFGEEREKHS--VHKTP 450 Query: 472 NTMIVAMLLLAALCVL 487 M V +++L+ V Sbjct: 451 WCMTVPLIILSVFSVF 466 >UniRef50_C5NVG1 Na(+)/H(+) antiporter subunit A n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NVG1_9BACL Length = 788 Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 103/377 (27%), Positives = 190/377 (50%), Gaps = 10/377 (2%) Query: 48 ISGITQLHAGVTLVARFAPPFEFA-DLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREY 106 IS + +++G T+ + A D+ L +D LS L+I+ + + LYS YM Sbjct: 44 ISNLKYIYSGGTIYKKLAFVSNVGLDINLNLDGLSLLFSLLITGIGTLVILYSCYYMSIT 103 Query: 107 EGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIA-RQDKTSINAGM 165 + K F+ IF+++M+ +++ DN + +EM S+SS+ L+ ++ S + Sbjct: 104 DEK-LHKFYIFLLIFMSAMLGVVLSDNMLSMYMFWEMTSVSSFLLISYWHENDASRKGAL 162 Query: 166 LYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRTLSLSPGLASAV---FLLAFFGFGAKA 222 I G VL++ ++ +GS + + + + G +L FG K+ Sbjct: 163 KSLIITVFGGVLMLAGIFILNNITGSFNVSEIIEFTKNHGYNDKYVVAMILIIFGAFTKS 222 Query: 223 GMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAI 282 P H WLP A A +S L S MVK GI+ +L++ + + +G +++ Sbjct: 223 AQFPFHIWLPDAMAAPTPISSYLHSATMVKAGIYLLLRIGIVFSFTSS----FGNILIIF 278 Query: 283 GAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGAL 342 G I+ L+G + A+ +D+K +LA+ST+ +G++ L +G+A +GL + + Sbjct: 279 GTITMLIGSISAIFLKDLKGILAYSTISQLGMMTLMIGIANLGLYNDNHYVYTFAFYAVC 338 Query: 343 FHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLN 402 FH++NHA FK LF+ G I H+ D+EK+ + + MP + +I +++ IPPL+ Sbjct: 339 FHIINHAAFKASLFMITGIIDHSFHSRDIEKLRGIKRYMPLSFILSIIAGFSMAGIPPLS 398 Query: 403 GFISEWYTWQSLFSLSR 419 GF S+ Y ++ L++ Sbjct: 399 GFYSKEYFLTVVYGLTQ 415 >UniRef50_B6YQ51 NADH dehydrogenase I subunit L n=32 Tax=Bacteroidetes RepID=B6YQ51_AZOPC Length = 637 Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 130/446 (29%), Positives = 216/446 (48%), Gaps = 67/446 (15%) Query: 72 DLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGF-----FMNIFIASMV 126 +L + +D +S M++VI+ + ++ +YSL YM+ +GF F+++F SM+ Sbjct: 83 NLGVLLDPISVMMLVVITTVSLMVHIYSLGYMK-------GEIGFQRYYAFLSLFSFSML 135 Query: 127 ALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTS-INAGMLYFFIAHAGSVLIMIAFLLM 185 L+V N F + +E++ +SS+ L+ K S + A F + + +I L++ Sbjct: 136 GLVVATNIFQMYIFWELVGVSSYLLIGFYYIKPSAVAASKKAFIVTRFADLGFLIGILIL 195 Query: 186 GRESGSLDFASFRTLSLSP--------------GLASAVFLLA--FFGFGAKAGMMPLHS 229 + + DF R L+ + GL+ +V+ LA F G K+ M PLH Sbjct: 196 SYYTRTFDF---RALTANNAVLVTASTAGRTFLGLSVSVWALALIFMGGAGKSAMFPLHI 252 Query: 230 WLPRAHPAAPSHASALM-SGVMVKIGIFGILKVAMDLLAQTGLPLWW----GILVMA--I 282 WLP A P+ SAL+ + MV G++ I ++ P+++ +L M + Sbjct: 253 WLPDAMEG-PTPVSALIHAATMVVAGVYLITRL---------FPVYFFAAPSVLKMIAFV 302 Query: 283 GAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGAL 342 GA ++ + A+ + DIKR+LA+ST+ + ++ A+GV+ G ++ L G ++ Sbjct: 303 GAFTSFFTAIIAVVQTDIKRVLAFSTISQISYMMAALGVSKYGG--YEGL----GYTASM 356 Query: 343 FHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLN 402 FHL HA FK LLFLGAG++I +++++M M L K MP T LI CLAI+ IPP + Sbjct: 357 FHLFTHAFFKALLFLGAGSVIHVVNSNEMNNMCGLHKYMPITNITFLIACLAIAGIPPFS 416 Query: 403 GFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRST 462 GF S+ V L PI +L V GL ++Y F + Sbjct: 417 GFYSK----------DEVLVATLHYQ-PIIFWILWVVAGLTAFYMFRLYFCIFWNGEKKY 465 Query: 463 HAEEA-QEVPNTMIVAMLLLAALCVL 487 A E P MI +++L+ V Sbjct: 466 DIYHASHESPFLMIFPLVILSVFSVF 491 >UniRef50_Q9V0S9 NuoM NADH dehydrogenase I, subunit M n=3 Tax=Pyrococcus RepID=Q9V0S9_PYRAB Length = 618 Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 124/489 (25%), Positives = 228/489 (46%), Gaps = 63/489 (12%) Query: 137 FIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFAS 196 F + +E+M+ +S+ +V+ S+ YF ++ G+ +++A L+ ++GS F+ Sbjct: 123 FFIFWEIMTFASFMMVLKFNRAASLK----YFLLSIMGAYAMLVAIGLIYAKTGSFSFSD 178 Query: 197 FRT----------LSLSPGLA----SAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHA 242 L +P + + ++LL FG KAGM PLH W P A+ Sbjct: 179 ISAFFGKEAVSTMLGGTPAFSKLDVALIYLLFLLAFGVKAGMFPLHVWAPDAYSETDQSY 238 Query: 243 SALMSGVMVKIGIFGIL--------KVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYA 294 +A+ SGV+ K G++G + K+ +DL P + G ++ +G ++ ++G + A Sbjct: 239 TAIFSGVLSKAGVYGFILLYILMYGKLLIDLGQVRSAPAF-GYVIAFLGGLTIIVGGILA 297 Query: 295 LAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGL 354 ++DI+RL A+S++ VG IL+ +G+ T +G+ A++H ++HALFKGL Sbjct: 298 ALQEDIRRLFAYSSISQVGYILVGLGIG-----------TSLGIEAAIYHAISHALFKGL 346 Query: 355 LFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSL 414 FL +I R + + G LA++MP+T I L+++ IPPL GF S+W ++++ Sbjct: 347 FFLIVATLIYRTGKTEFKDFGGLAEKMPFTFTMAFIAILSLAGIPPLVGFASKWLIFEAV 406 Query: 415 FSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKM-YGITFCGAPRSTHAEEAQEVPNT 473 S + PI M+ + + ++ Y + F R + E+ ++ P Sbjct: 407 ISQNL----------PILGGMVFFGSAIGFVYLIRFTYAVWF--GQRPSDIEDTKDAPLP 454 Query: 474 MIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSL 533 + + M +L L V+ ++ +A ++ I F T + L G ++ + Sbjct: 455 LAIGMAILGTLNVVFGVAPGIIAKELNAI---FGRTVIGGNIWELELGFGRYNALLVTIW 511 Query: 534 LLLLLLAMPLLPGLYWLWCRSRRAAFRRT---GDAWACGYGW---ENAMAPSGNGVMQPL 587 L++ LL + LY+L +R+ T G+ Y N P V L Sbjct: 512 LVIGLLIAGI---LYFLGASTRKVPVTDTYQSGNPVTMDYNLTIRRNFFLPLKEAVAFWL 568 Query: 588 RVVFSALFR 596 R+ F L+R Sbjct: 569 RISFDKLYR 577 >UniRef50_B1L375 NADH:ubiquinone oxidoreductase subunit 4 (Chain M) n=2 Tax=Archaea RepID=B1L375_KORCO Length = 507 Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 132/438 (30%), Positives = 222/438 (50%), Gaps = 49/438 (11%) Query: 71 ADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMR------EYEGKGAAAMGFFMNIFI-- 122 + ++ +D +SA + L I ++ + S+YSL YM E EG+ A+ G + +++ Sbjct: 71 GNFSMLLDPISAPVALSIGIVTSMISIYSLRYMEHRFEEMEKEGQRPASWGIYFMLYVMF 130 Query: 123 -ASMVALLVMDNAFWFIVLFEMMSLSSWFLV----IARQDKTSINAGMLYFFIAHAGSVL 177 A+M+ ++ N F + E+ L S+ L+ R+++ + +LY H G++ Sbjct: 131 SAAMMGTVLSTNLVEFYLFLEVSLLPSFLLIAFYGYGRRERIA----LLYLIWTHVGALA 186 Query: 178 IMIAFLLMGRESGSLDF----ASFRTLSLSPGLASA----VFLLAFFGFGAKAGMMPLHS 229 +I LL+G + + DF + L L A VF+ G K + +H Sbjct: 187 FLIGALLLGLNARTFDFFNPIKGVANMGLGELLPEAMRMPVFIAILIGLFVKMAVFGVHI 246 Query: 230 WLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALL 289 WLP AH AP+ SAL+S ++ I + ++++A L + +L +A+ ++ + Sbjct: 247 WLPYAHAEAPTPVSALLSPNLIGIAGYALIRIAYVLFPSDFASISPYLLGLAL--LTIIY 304 Query: 290 GVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHA 349 G L ALA+ D KR LA+S+V +G +L+ GVA V T +G+ GAL H HA Sbjct: 305 GGLMALAQDDFKRFLAYSSVSQMGYLLM--GVASV---------TSLGMAGALLHYAAHA 353 Query: 350 LFKGLLFLGAGAIISRLH-THDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEW 408 + K LLF AG +I++LH + KMG LA +MP TAA LIG + I+ +PP G Sbjct: 354 VGKALLFATAGVLITQLHGLRSISKMGGLATKMPMTAALALIGFMHITGVPPSLGL---- 409 Query: 409 YTWQSLFSLSRVEAVALQLAGPIAMVMLAVTG-GLAV-MCFVKMYGITFCGAPRSTHAEE 466 W + L+ V +A+++ +V L + G GL+ FV M I F S +E Sbjct: 410 --WSEILILAGVSDLAMRIGQFTLIVALLLVGIGLSTAYSFVTMRRIFF--GHESEASEH 465 Query: 467 AQEVPNTMIVAMLLLAAL 484 A+E +++ M+++AA+ Sbjct: 466 AKEAGYGLLLPMIVIAAM 483 >UniRef50_B2KDU2 NADH dehydrogenase (Quinone) n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KDU2_ELUMP Length = 476 Score = 145 bits (365), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 109/356 (30%), Positives = 183/356 (51%), Gaps = 34/356 (9%) Query: 78 DSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIAS--MVALLVMDNAF 135 + + M+L + LV +C + Y + E KG ++ I A+ M + + F Sbjct: 63 EDIFTIMMLGLIYLVGLCVCWFAAYAEKTERKGT----YYALILTATAGMCGITAARDFF 118 Query: 136 WFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFA 195 V E++++ ++ L+ + + YF+++ S IM A ++ +G F Sbjct: 119 TVYVFLEVIAVCAFTLIAFYNREKGTEGALKYFYLSSLASTAIMFAIAILFLYAGGTSFE 178 Query: 196 SFRTLSLSPGLASAVFLLAFFG-----FGAKAGMMPLHSWLPRAHPAAPSHASALMSGVM 250 +++ ++ A+ V + F G F K G++P H+W P A+ +A + SAL++G++ Sbjct: 179 HLKSV-MASNQANPVVINVFLGIMACGFMVKTGLVPFHTWTPDAYESASTPVSALLAGII 237 Query: 251 VKI-GIFGILKVAMDLLAQTGL----PLWWGILVMAIGAISALLGVLYALAEQDIKRLLA 305 K G + ++K+AM L L P+ G +M GA+S + G + AL + KR+LA Sbjct: 238 TKAAGAYTLIKIAMMLGITNHLTAHNPV--GKAIMVFGAVSIVAGSVMALYQTSFKRMLA 295 Query: 306 WSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISR 365 +S++ +G I LA G L PL GL GA+FHL NHA FK LF AGA+ S Sbjct: 296 YSSISQMGYIFLAAG-------LSTPL----GLAGAIFHLFNHATFKTALFFNAGALESA 344 Query: 366 LHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYT----WQSLFSL 417 T +++++ L K+MP+T+ LI L+ + IPPL+GF S++ WQS F L Sbjct: 345 AGTSNIKELSGLEKQMPYTSMMSLISMLSTAGIPPLSGFWSKFIIILALWQSGFYL 400 >UniRef50_D2BHY2 NADH:quinone oxidoreductase subunit 5 (Chain L) n=5 Tax=Dehalococcoides RepID=D2BHY2_DEHSV Length = 654 Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 122/407 (29%), Positives = 195/407 (47%), Gaps = 41/407 (10%) Query: 72 DLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVM 131 L L D L+ M VI + ++ +YS YM + KG F++ F ASM+ L++ Sbjct: 81 SLNLNFDPLAGIMCFVILFVSLMVHIYSQGYM--HGDKGYPRYYAFLSFFTASMLGLVLS 138 Query: 132 DNAFWFIVLFEMMSLSSWFLV-IARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESG 190 DN + +E++ L+S+ L+ + NA F + G V + A L++ +G Sbjct: 139 DNLLFTFFFWELVGLASYLLIGFWFTRPAAANAAKKAFIVTRIGDVGFLAAILILFANTG 198 Query: 191 SLDFASFRTLS----LSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALM 246 +LD S ++ + G + L F G K+ PLH WLP A P+ SAL+ Sbjct: 199 TLDINSLNGMAEMGFIGAGTVTVAALGIFAGAVGKSAQFPLHVWLPDAMEG-PTPVSALI 257 Query: 247 -SGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLA 305 + MV G+F + + + LW V IGA++A+ AL D+KR+LA Sbjct: 258 HAATMVAAGVFLVARTYPIFESSATAMLW----VSIIGAVTAIFAATMALVMNDMKRILA 313 Query: 306 WSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISR 365 +STV +G ++L +G + + +FHL NHA FK LLFLG+G++ Sbjct: 314 YSTVSQLGYMMLGLGTGGIAI--------------GIFHLFNHAFFKSLLFLGSGSVNHA 359 Query: 366 LHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVAL 425 T D+ +MG L+K MP T+ LI L+++ I PL+GF S+ E +A Sbjct: 360 TGTFDIREMGGLSKPMPVTSKTFLIASLSLAGIWPLSGF------------FSKDEILAG 407 Query: 426 QLAGPIAMVMLA-VTGGLAVMCFVKMYGITFCGAPRST-HAEEAQEV 470 + G + + +LA +T L ++Y + F G R H E+ +V Sbjct: 408 AMDGQVILFILALITVFLTAFYMFRLYFVAFGGTYRGKGHPHESPKV 454 >UniRef50_C8W239 Hydrogenase 4, membrane subunit n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W239_DESAS Length = 489 Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 113/349 (32%), Positives = 181/349 (51%), Gaps = 28/349 (8%) Query: 75 LRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAM---GFF---MNIFIASMVAL 128 L +D+LS+ V +I ++ +C LY+++Y+R + +G G F +++F+ASM Sbjct: 60 LVLDALSSVFVFIIGVVGTICCLYAVSYLRRDQERGELEQRRTGIFFGLLHLFLASMYLA 119 Query: 129 LVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIA-----FL 183 ++ DN V E ++ S LV K S+ A Y I G M+ + Sbjct: 120 VLADNLGVMWVAIEATTIVSALLVGFYGHKESLEAAWKYIIICTVGIAFAMLGIIFTYYA 179 Query: 184 LMGRESGSLDFASFRTL-----SLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAA 238 + G G S+R L + P L F+ G+G KAG+ PLH+WLP AH A Sbjct: 180 VRGISGGEEISLSWRLLFSMAGQIDPSLMKLAFIFVLVGYGTKAGLFPLHTWLPDAHSQA 239 Query: 239 PSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQ 298 PS SAL+SGV++ ++ I++ + + G +L++ G +S + + + L ++ Sbjct: 240 PSPVSALLSGVLLNCAVYAIIRFHLLTVKSVGGNFSAKLLII-FGLLSMVGSLPFILVQK 298 Query: 299 DIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLG 358 DIKRLLA+S+VE++GII+L V + V+G GAL HL+NHAL K +LFL Sbjct: 299 DIKRLLAYSSVEHIGIIVLGV-----------GIGGVLGYTGALLHLINHALGKSVLFLS 347 Query: 359 AGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISE 407 AG + + ++ + KM + + +P T+ + LAI PP FISE Sbjct: 348 AGTLTQKYNSKLIPKMKGIGQLLPITSTVFMASLLAIGGAPPFGLFISE 396 >UniRef50_A1ALK0 NADH dehydrogenase (Quinone) n=2 Tax=Pelobacter propionicus DSM 2379 RepID=A1ALK0_PELPD Length = 473 Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 97/340 (28%), Positives = 183/340 (53%), Gaps = 26/340 (7%) Query: 75 LRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIAS---MVALLVM 131 LR+D +S M+L I L+V S S+ +R+ + F+N+ + S M ++++ Sbjct: 64 LRVDGISMLMLLAIGLVVAASSAISIPMIRDDTQRHN-----FVNLVLLSLLGMNGMVMV 118 Query: 132 DNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGS 191 + F V E++S+ S+ L+ ++ Y ++ ++L++ + ++ +G+ Sbjct: 119 TDLFSLYVFLEIVSVCSFILIALCGEREMFQGAFTYIILSAVATMLMLTSIAILFLYAGN 178 Query: 192 LDFASFRT-LSLSPGLASAVFLLAFF--GFGAKAGMMPLHSWLPRAHPAAPSHASALMSG 248 F + ++ G A +F + F G K G++P H WLP A+ ++ + S L++G Sbjct: 179 TSFTTLAAAIAAQQGNAMVLFGVVLFLIGLFIKGGIVPFHGWLPDAYSSSVAPVSILLAG 238 Query: 249 VMVKI-GIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWS 307 ++ K+ G++ ++++ ++ T P +L+ +G +S + G L AL ++D KR+LA+S Sbjct: 239 IVTKVSGVYTLIRLVTEVFGPT--PRTNEVLLF-VGTLSIVAGALGALGQRDFKRMLAYS 295 Query: 308 TVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLH 367 ++ VG I+L++G +G+ GA+FHL NH +FK LF+ A A+ + Sbjct: 296 SISQVGYIVLSLGAG-----------NALGIAGAIFHLFNHTVFKTQLFMNATAVEEQTG 344 Query: 368 THDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISE 407 + D+E+MG LA RMP T +I L+ + IPPL GF S+ Sbjct: 345 SRDLERMGGLASRMPVTGWTSIIAFLSAAGIPPLAGFWSK 384 >UniRef50_B9LUW7 NADH/Ubiquinone/plastoquinone (Complex I) n=13 Tax=cellular organisms RepID=B9LUW7_HALLT Length = 698 Score = 144 bits (362), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 115/353 (32%), Positives = 174/353 (49%), Gaps = 30/353 (8%) Query: 72 DLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVM 131 + LR D+L + S L +V S YS+ YMR G + F S+ A + + Sbjct: 76 EFVLRADALGMLFAFLASGLWIVTSFYSIGYMR---GNDEVNQTRYFAAFAVSLSATMGI 132 Query: 132 ---DNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYF-FIAHAGSVLIMIAFLLMGR 187 N V +E++S++++ LV + + AG Y + G VL++ L+ Sbjct: 133 AFAGNLVTIFVFYELLSIATYPLVAHDETDEARAAGRKYLAYTMFGGGVLVLAGTALVYL 192 Query: 188 ESGSLDFASFRTLSL---SPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASA 244 +G++ F + L PGLA F L GFG KAG+MPLH WLP A AP+ S Sbjct: 193 IAGNVSFTAGGIEELANADPGLAMLAFFLLAIGFGVKAGIMPLHQWLPEAM-VAPTPVSG 251 Query: 245 LMSGV-MVKIGIFGILKVAMD-----LLAQTGLPLWW--GILVMAIGAISALLGVLYALA 296 L+ V +VK G FG+ +V +D L+ LP + G+++ IGAI+ + AL Sbjct: 252 LLHAVAVVKSGAFGVSRVVLDVFGPELVFDLSLPFGFSAGLVLSTIGAITLTAASIIALR 311 Query: 297 EQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLF 356 + +K+ LA+STV + I+L +G L GL+GAL H+ HA K LF Sbjct: 312 KDHLKQRLAYSTVSQLSYIILGLG-----------LFGWYGLVGALLHIPAHAFMKLTLF 360 Query: 357 LGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWY 409 AG + HT + +M + KRMP T A + L ++ IP L GF+S++Y Sbjct: 361 FCAGNLHVSTHTDYISEMAGIGKRMPLTMGAFTVASLGMAGIPLLAGFVSKYY 413 >UniRef50_B4UA28 NADH dehydrogenase (Quinone) n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4UA28_HYDS0 Length = 480 Score = 144 bits (362), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 108/353 (30%), Positives = 186/353 (52%), Gaps = 25/353 (7%) Query: 77 MDSLSAFMVLVISLLVVVCSLYSLTYM-REYEGKGAAAMGFFM--NIFIASMVALLVMDN 133 +DSL+ ++ ++S++ + LYS+ Y+ +E K + F++ N F+ SM+ L+ N Sbjct: 59 LDSLNIVLIGIVSVVGFLTYLYSIGYLEKEKSLKESKIKEFYLWINTFMFSMLLLVSTSN 118 Query: 134 AFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVL-----IMIAFLLMGRE 188 V E +LS+ FL+ ++KT++ A Y + G L I+I F ++ Sbjct: 119 LGIMWVSIEATTLSTTFLISFYKNKTAVEASWKYIMLCSLGIALALFGIILIYFGVINII 178 Query: 189 SG---SLDFASFRTLS--LSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHAS 243 G SLD+ + ++ + L F+ GFG K G+ PLH WLP AH AP+ S Sbjct: 179 GGGLYSLDWQNIMPIADKIDKNLLKIAFVFVLVGFGTKMGLAPLHFWLPDAHSEAPTPIS 238 Query: 244 ALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRL 303 ALMS V++ + I+++ + ++ G+ + ++ IG S +L ++ +D KRL Sbjct: 239 ALMSSVLLSCSFYTIIRI-FSIESKAGIGAFTYDTMLYIGLFSIVLASIFIPRSRDYKRL 297 Query: 304 LAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAII 363 LA+ST+E++GI+ ++G+ + G+ +L L+ HAL K L+F+ +G+I+ Sbjct: 298 LAYSTMEHMGILAFSLGLG-----------SFEGIFASLLGLIAHALTKALMFMSSGSIL 346 Query: 364 SRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFS 416 LHT ++ + L K +P TA +G AI+ PP FISE+ T S F Sbjct: 347 VNLHTKSIKDIKGLFKILPITATFLAVGVFAITGAPPFLLFISEFLTLISAFK 399 >UniRef50_B1LCD4 NADH dehydrogenase (Quinone) n=6 Tax=Thermotogaceae RepID=B1LCD4_THESQ Length = 626 Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 129/487 (26%), Positives = 228/487 (46%), Gaps = 53/487 (10%) Query: 21 SLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAPPFEFADL-----TL 75 S+F+ + +++ K+ + + + G+ I+ I L G FE DL Sbjct: 14 SIFIYLVSKMSWKMGALLNFLAGLFTILY-IFTLKVGT---------FEKLDLFGLNIQF 63 Query: 76 RMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAF 135 ++S + V L++V L+S ++ + + + M F+ + A + + + + Sbjct: 64 EWTNVSFYFSFVSLLVIVSVMLFSTKWLETQKYRASYNM--FLLMVTAGSLGVFMAADLI 121 Query: 136 WFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDF- 194 V +E+ LSS L++ + K + A ++Y ++ G+ + L + G+L+ Sbjct: 122 TLYVFWEIAVLSS-LLIVPMEKKEARKAVVVYAVMSAVGTYAFLYGTFLAYQRYGTLNIH 180 Query: 195 --ASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVK 252 A S G AVFLL AK+G+ PLH WL H AP+ S+++SG +K Sbjct: 181 GIAQGMLNDTSIGFKMAVFLLLSAAGIAKSGIFPLHIWLRETHGLAPNAFSSVLSGQFIK 240 Query: 253 IG---------IFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRL 303 +G + LKV ++ +G+PL IL+ A+G +S ++G L A+ + D+K L Sbjct: 241 LGNYIFLLVLSVIPSLKVFSEVTVYSGIPLPNYILI-ALGNVSIVIGTLMAIKQDDMKML 299 Query: 304 LAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAII 363 +A+S+V N G IL+ +G DPL G G +FH+ NHA+ ++F+ A+I Sbjct: 300 MAYSSVANGGYILIGIGTM-------DPL----GFEGGMFHIFNHAVASAVIFMAFAAVI 348 Query: 364 SRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAV 423 R T + +MG L +MP T L ++++ IPP++GFIS+W +Q+L Sbjct: 349 YRTKTQKISEMGGLIHKMPVTFLVYLFSIISLAGIPPMSGFISKWMIYQALVRKGMFITA 408 Query: 424 ALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAA 483 L G I G + F + G+ PR + +E P M+ M+LL Sbjct: 409 FLAFFGSI---------GSFLYVFRPLAGVFLGQLPRKY--RDVKEAPAVMLTPMVLLVL 457 Query: 484 LCVLIAL 490 + + + Sbjct: 458 ISFFLGV 464 >UniRef50_B0K5U2 NADH dehydrogenase (Quinone) n=6 Tax=Thermoanaerobacter RepID=B0K5U2_THEPX Length = 486 Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 110/447 (24%), Positives = 218/447 (48%), Gaps = 40/447 (8%) Query: 66 PPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMR--EYEGKGAAAMGFFM--NIF 121 PP + L D LS FM + L + C+L L +YE A +FM +I Sbjct: 66 PPI---GIELYADKLSVFM----ATLFLSCALLILVSFESFKYEIGEEKAAYYFMLVSIL 118 Query: 122 IASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIA 181 I +M+ ++ + F V E+ ++++ ++ + +K ++ A + YF ++ S I++ Sbjct: 119 IGAMLGIIFTRDLFNLYVFVEITTIAACGIISIKNEKKAVEAALKYFILSSIASTSILLG 178 Query: 182 FLLMGRESGSLDFASFRTLSLS-----PGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHP 236 +L+ G L + + +++ L P + S +L GF K+ + PLH WLP AH Sbjct: 179 LILIYNIGGYLHYDTLKSVLLESKDVFPKIISGSLVLIISGFSLKSALFPLHIWLPDAHS 238 Query: 237 AAPSHASALMSGVMVKIGIFGILKVAMDL--LAQTGLPLWWGILVMAIGAISALLGVLYA 294 AAP+ +SAL+SG+++K+ +F I+++ D+ L T + +L +A+G + G + A Sbjct: 239 AAPTTSSALLSGLVIKVYVFAIIRLLNDVFGLMYTYTSILLEVL-LALGNVGVFSGAVLA 297 Query: 295 LAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGL 354 + DIKR LA+S+V +G + L +G G GAL +LNHAL K Sbjct: 298 GFQNDIKRRLAYSSVSQMGYVFLGLGFN-----------NQYGFEGALLQVLNHALAKSG 346 Query: 355 LFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSL 414 LFL AG ++ T D++ + ++ ++P TA + +++ +P GF+S+W+ Sbjct: 347 LFLAAGWMVKFTGTRDIKGLEKISDKLPLTALCFSVCAMSLVGMPFTLGFLSKWH----- 401 Query: 415 FSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTM 474 + A++ P+ ++ + ++ L + + + F G E +++ Sbjct: 402 -----LAMAAIESGRPLQLIFIILSALLTLSYYFPIIVKAFTGDKSFERKLEFEKIKGGS 456 Query: 475 IVAMLLLAALCVLIALSASWLAPKIMH 501 ++++L+ + + + + +L ++ Sbjct: 457 LISILIFTFVIMFLGIYPKFLLKYLLQ 483 >UniRef50_B1ZUJ7 NADH dehydrogenase (Quinone) n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZUJ7_OPITP Length = 542 Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 107/345 (31%), Positives = 168/345 (48%), Gaps = 21/345 (6%) Query: 73 LTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMD 132 + LR D+LS +V S L ++ YS YMR + + + + D Sbjct: 88 IALRADALSMIFAVVASFLWILAVFYSAGYMRGLQEHAQTRFNVCFALALFGAIGCAFAD 147 Query: 133 NAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYF-FIAHAGSVLIMIAFLLMGRESGS 191 N + +E++S+S++ LV QD+ G Y ++ L+ A +L+ SG+ Sbjct: 148 NLLTLYLFYEIVSVSTYPLVAHHQDEEGYEGGRKYLTYLTTTAKALVFPAIVLIFVLSGT 207 Query: 192 LDFASFRTLSLSP-----GLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALM 246 LDFA + P G+ +A+++ GF AK G+MP H WLP A AP+ SAL+ Sbjct: 208 LDFAGNAHTGIIPATVQHGVTTALYIACLLGF-AKNGVMPFHHWLPGAM-VAPTPVSALL 265 Query: 247 SGV-MVKIGIFGILKVAMDLLA-QTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLL 304 V +VK+G+F ++V + + T L GI +I+ L+ + AL++ ++K L Sbjct: 266 HAVAVVKVGVFSTVRVMLYVFGVDTMDALNLGIPTAYFVSITILVASIIALSKDNLKTRL 325 Query: 305 AWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIIS 364 A+STV + I+L V LLT + G LFH+ HA K LF AGAI Sbjct: 326 AYSTVSQLSYIILGVA-----------LLTPTAVAGGLFHIAAHAFAKITLFFCAGAIYV 374 Query: 365 RLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWY 409 H + +M L + MPWT A + L++ +PP+ GF S+ Y Sbjct: 375 ATHKKYISEMSGLGRVMPWTFGAFALASLSMIGVPPVGGFTSKLY 419 >UniRef50_A0LST9 NADH/Ubiquinone/plastoquinone (Complex I) n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LST9_ACIC1 Length = 684 Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 151/560 (26%), Positives = 258/560 (46%), Gaps = 59/560 (10%) Query: 132 DNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMG---RE 188 D+ F + +E++SL+ + L A Q A M F G L+++ FLL+ + Sbjct: 127 DDVFVLVGGWELLSLAFYLLAGAPQRSGGGRAAMTAFSFGKIGGGLLLVGFLLLAAPQQG 186 Query: 189 SGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSG 248 G FA + L P A LL GF +K G++P H W+P + AA AL++G Sbjct: 187 PGGWRFADL-AVHLGPRHDIAYALL-VAGFASKVGLLPFHVWVPPTYAAAVGPVRALLAG 244 Query: 249 VMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWST 308 V +G +G+ + A LL + P+W + V+ + I+A+LG+ +A + + R++A+S+ Sbjct: 245 AAVNVGFYGLYRTAA-LLGRP--PVWLVVAVLVVAGITAILGIAHAAVQTHLMRVIAYSS 301 Query: 309 VENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHT 368 VEN G+IL GVA+ G + P L VGLL A ++ HA K LLF+ A + + Sbjct: 302 VENAGLILAGYGVALAGWYVGQPRLVAVGLLAATLQVIAHAAAKALLFVSAAGPERHVGS 361 Query: 369 HDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLA 428 D++++ + +R+P + A IG + ++ +P GF+SEW+ ++L R+ +A+++A Sbjct: 362 DDLDELVGIGRRLPASGAGLAIGSITLAGLPLTAGFVSEWFLLEALMQQFRLTGLAVKVA 421 Query: 429 GPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLI 488 +A ++A+T G A + FV+++G G R+ A +E + + +A L L+ Sbjct: 422 MAVAGALVALTTGFAGVTFVRLFGFVVLG-KRNGQAATNRERGDLGWLGGSAVAILS-LV 479 Query: 489 ALSASWLAPKIMHIAHAFTNTPPATVASGI-ALVPGTFHTQ-----------------VT 530 L+ + +AP+++ +A+G+ LV TQ ++ Sbjct: 480 CLATAAIAPEVIRF-----------IAAGLDPLVGRDLVTQALNGPWVLQPVFADFSILS 528 Query: 531 PSLL------LLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVM 584 PS L L L A L G R RR R+ G+ A G Sbjct: 529 PSWLWIVLPGFLALAAGIGLTGSRLAMLRVRRVPAWRSATGGVAGHDRYTAF-----GYT 583 Query: 585 QPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARA-QSTEPFWDERVI--------RPIVS 635 P R + + L R +L G A R + + V+ RP++ Sbjct: 584 NPTRKLLAGLLLTRTELRALEAATGGRAGSGQRGVGDVQLGYTSDVVEAVGAFLYRPLIR 643 Query: 636 ATQRLAKEIQHLQSGDFRLY 655 T+R+ ++ LQSG Y Sbjct: 644 WTRRVVAGVKRLQSGRLEAY 663 >UniRef50_P31971 NAD(P)H-quinone oxidoreductase chain 5 n=25 Tax=cellular organisms RepID=NU5C_SYNP2 Length = 664 Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 175/672 (26%), Positives = 291/672 (43%), Gaps = 122/672 (18%) Query: 24 LLGLDRLAIKLSGIT-----SLVGGVIGIISGI----TQLHAGVTLVARFAPPFEFA-DL 73 L+ L++ KL + SL+G + + G+ Q H T +A +F + Sbjct: 26 LISLNKFTNKLRQLNAVFVLSLIGTSMALSFGLLWSQIQGHEAFTYTLEWAAAGDFHLQM 85 Query: 74 TLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDN 133 +D LSA M ++++ + ++ +Y+ YM G +++IF +SM+ L+ N Sbjct: 86 GYTVDHLSALMSVIVTTVALLVMIYTDGYMAH--DPGYVRFYAYLSIFSSSMLGLVFSPN 143 Query: 134 AFWFIVLFEMMSLSSWFLVIARQD-KTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSL 192 + +E++ + S+ L+ D K + +A F G +++ L + +GS Sbjct: 144 LVQVYIFWELVGMCSYLLIGFWYDRKAAADACQKAFVTNRVGDFGLLLGMLGLYWATGSF 203 Query: 193 DFASF--------RTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASA 244 +F T +S LA +L F G AK+ PLH WLP A P+ SA Sbjct: 204 EFDLMGDRLMDLVSTGQISSLLAIVFAVLVFLGPVAKSAQFPLHVWLPDAM-EGPTPISA 262 Query: 245 LM-SGVMVKIGIFGILKV---------AMDLLAQTGLPLWWGILVMAIGAISALLGVLYA 294 L+ + MV G+F + ++ AM+++A TG A +A LG A Sbjct: 263 LIHAATMVAAGVFLVARMYPVFEPIPEAMNVIAWTG-------------ATTAFLGATIA 309 Query: 295 LAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGL 354 L + DIK+ LA+ST+ +G +++A+G+ G LFHL+ HA FK + Sbjct: 310 LTQNDIKKGLAYSTMSQLGYMVMAMGIG--------------GYTAGLFHLMTHAYFKAM 355 Query: 355 LFLGAGAIISRLHT---------HDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFI 405 LFLG+G++I + DM MG L K MP TA LIG LAI IPP GF Sbjct: 356 LFLGSGSVIHGMEEVVGHNAVLAQDMRLMGGLRKYMPITATTFLIGTLAICGIPPFAGFW 415 Query: 406 SEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAE 465 S+ + +A + A P+ + T G+ +MY +TF G R T + Sbjct: 416 SK----------DEILGLAFE-ANPVLWFIGWATAGMTAFYMFRMYFLTFEGEFRGTDQQ 464 Query: 466 EAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTF 525 +++ L+A+ AP+ H +P +AL Sbjct: 465 LQEKL-------------------LTAAGQAPEEGHHGSKPHESPLTMTFPLMAL----- 500 Query: 526 HTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWE--NAMAPSGNGV 583 PS+L+ LL G+ W R F A A +G+E + GN V Sbjct: 501 ---AVPSVLIGLL-------GVPW-GNRFEAFVFSPNEAAEAAEHGFELTEFLIMGGNSV 549 Query: 584 -MQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAK 642 + + + ++L L+Q++DP RL + V + + ++D+ V T+RLA+ Sbjct: 550 GIALIGITIASLMYLQQRIDPA-RLAEKFP-VLYQLSLNKWYFDDIYNNVFVMGTRRLAR 607 Query: 643 EIQHLQSGDFRL 654 +I + D+R+ Sbjct: 608 QILEV---DYRV 616 >UniRef50_B0KD08 NADH dehydrogenase (Quinone) n=6 Tax=Thermoanaerobacter RepID=B0KD08_THEP3 Length = 559 Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 128/455 (28%), Positives = 217/455 (47%), Gaps = 39/455 (8%) Query: 45 IGIISGITQLHAGVTLVARF-APPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYM 103 + +I GI L A T F + F + + ++ +L + + + +L+ Y+ Sbjct: 35 VALICGICVLFAAFTPAGDFLSINTGFHSIRFTLGDINRIFLLFSTSIWCLVALFLTGYV 94 Query: 104 REYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINA 163 E + A GFFM + + S++ + + + F FE+M+L S+FL+I ++ ++++ Sbjct: 95 HHMENR-ARFWGFFM-LTLWSVIFVFLAGDLLTFYFFFELMALFSYFLIIHQESTEALSS 152 Query: 164 GMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRTLSLSPGLASAV-FLLAFFGFGAKA 222 G LY F G + ++ A L++ G+ +F + GL + +L F GFG KA Sbjct: 153 GNLYIFTTFVGGLAVLGAILIIYNNVGTFEFEKLNLVIEHGGLKGYLALVLLFVGFGIKA 212 Query: 223 GMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAI 282 G +P H WLPRAHP AP+ ASAL+SGV+VK G+FGIL++ + + G++++ + Sbjct: 213 GCLPFHFWLPRAHPVAPAPASALLSGVLVKSGVFGILQILRYTNSH-----YLGLVLIIL 267 Query: 283 GAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGAL 342 G +S L G AL + KRLLA+ T+ +G I +++ ++ H L+ Sbjct: 268 GILSTLYGGFMALCDNYPKRLLAYGTISQIGYIFVSISATILA-GAHS-------LVAPY 319 Query: 343 FHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLN 402 H+ H L K LFL G I L T++M+++ L +P A A + L ++ P Sbjct: 320 LHIYAHGLSKTALFLAVGYI--YLKTYEMKQLKNLT-LVPLAAIA--LAGLNLAGFPGFI 374 Query: 403 GFISEWYTWQSLFSLSR-------VEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITF 455 G+ ++ T L LS VE V +L+G + L CF + Y Sbjct: 375 GYTAKILTKDLLLCLSTQGMFFHWVE-VIFRLSGILTAAYLTKI----FFCFYESYLKHR 429 Query: 456 CGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIAL 490 P S E N MI + LL + +++ Sbjct: 430 VKNPLSNQKEF-----NIMIFVLFLLVFMTIILGF 459 >UniRef50_B8D5B8 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit n=1 Tax=Desulfurococcus kamchatkensis 1221n RepID=B8D5B8_DESK1 Length = 520 Score = 142 bits (359), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 116/394 (29%), Positives = 196/394 (49%), Gaps = 48/394 (12%) Query: 66 PPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMRE--YEGKGAAAMGFFMNIFIA 123 PP +T +D L+ +VL SL++ V +YS+ Y+ + Y +G F I Sbjct: 71 PPL---GITYTLDKLTGILVLTTSLVLTVIMVYSVEYIVDDGYPWYVTLMLGVFSGI--- 124 Query: 124 SMVALLVMDNAFWFIVLFEMMSLSSWFLVIA-RQDKTSINAGMLYFFIAHAGSVLIMIAF 182 + +++ + F V+ E+ +SS+ LV+ R I +G+ Y F+ G+ L ++A Sbjct: 125 --LGVIMTSDVFNLFVMLEVTGVSSYGLVMYYRHRAGPIVSGIKYAFVGAMGTTLYLLAL 182 Query: 183 LLMGRESGSLDFAS-------FRTLSL----------SPGLASAVFLLAFFGFGAKAGMM 225 ++ GSL+ +R S+ S GL A+ +F+ F K+G+ Sbjct: 183 AIIYNVYGSLNLIDLSLKTHGYRGSSITYMGTGYDAVSIGLIMAI---SFWTFSIKSGVF 239 Query: 226 PLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGL----PLWWGI--LV 279 P H WLP AHPAAPS SA++SG++V G G+ K+ + + L P I L+ Sbjct: 240 PNHFWLPDAHPAAPSPVSAMLSGLVVNTGAVGLYKILYLIYGGSILDSLTPARDAISFLI 299 Query: 280 MAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLL 339 + GA SA++G L ++D+KR++A+STV N G I + +G+ L+ G+L Sbjct: 300 VLTGAFSAIIGALLMNIQEDVKRMIAYSTVMNTGYIFMGIGI-----------LSPFGIL 348 Query: 340 GALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIP 399 L++ + H+L K LFL G +I + + ++ K A +I L +S IP Sbjct: 349 AFLYYTVVHSLAKSTLFLSTGLLIKYTGSRRINELAGSFKTHIIPGVASVISLLTLSGIP 408 Query: 400 PLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAM 433 PL GF+ + + +LFS + V A+ + +A I + Sbjct: 409 PLPGFLGKLLLYNALFSYNPVFAIVMLIASAIGL 442 >UniRef50_A9F578 NADH dehydrogenase I chain M n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9F578_SORC5 Length = 754 Score = 142 bits (358), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 111/364 (30%), Positives = 178/364 (48%), Gaps = 40/364 (10%) Query: 77 MDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFW 136 +D +S MVL+ +L+ V +L S Y + KG AM N+ + M + + + F Sbjct: 278 VDGVSISMVLLTALISFVGALAS--YSVHDQLKGYFAM---YNLLVTGMFGVFIALDLFL 332 Query: 137 FIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDF-- 194 F V +E+M L +FL+ A + +F AGSV +++AF+ +G Sbjct: 333 FFVFWEVMLLPMYFLIGIWGGPRREYAAIKFFLYTLAGSVFMLLAFIWFYLNAGHTYLVD 392 Query: 195 --ASFRTLSLSP--------------GLASA--VFLLAFFGFGAKAGMMPLHSWLPRAHP 236 A+ R S+ G+A+ V++ F GF K M P H+WLP AH Sbjct: 393 GQATERIFSIPELSRVAWAAQGLTILGVAAVKVVWIWLFVGFAIKIPMFPFHTWLPDAHV 452 Query: 237 AAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAI-GAISALLGVLYAL 295 AP+ S +++GV++K+G +GIL++ LL + W MA+ G ++ L G A+ Sbjct: 453 EAPTAISVILAGVLLKMGTYGILRINFTLLPEA---TQWAAPAMAVFGVVNILYGAFCAM 509 Query: 296 AEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLL 355 A+ D+K+L+A+S+V ++G LLA+G +T G+ L + NH L G+L Sbjct: 510 AQSDLKKLVAYSSVSHMGFTLLALGA-----------MTPQGIQACLVQMFNHGLITGML 558 Query: 356 FLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLF 415 F G + R+HT D+++ G LA MP A +A +P L+GF E T+ F Sbjct: 559 FTLVGVVYDRVHTRDIDRFGGLASEMPLYTALVGFAFMASLGLPGLSGFWGEAMTFIGAF 618 Query: 416 SLSR 419 R Sbjct: 619 PRYR 622 >UniRef50_B5EN60 Proton-translocating NADH-quinone oxidoreductase, chain L n=25 Tax=Proteobacteria RepID=B5EN60_ACIF5 Length = 660 Score = 142 bits (358), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 131/428 (30%), Positives = 207/428 (48%), Gaps = 50/428 (11%) Query: 75 LRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNA 134 +DSL+A M++V++ + + LY++ YM + G A ++ +F SM+ L++ +N Sbjct: 88 FDIDSLTALMLVVVTFVSLSVHLYTVGYM--HGDPGYARFFSYIALFTFSMIMLVMSNNF 145 Query: 135 FWFIVLFEMMSLSSWFLVIARQDKTSIN-AGMLYFFIAHAGSVLIMIAFLLMGRESGSLD 193 +E + L S+ L+ + S N A + F + G +I + GSLD Sbjct: 146 LQLFFGWEAVGLVSYLLIGFWFQRESANVAAIKAFIVNRVGDFGFLIGIAAVYHYCGSLD 205 Query: 194 FASF---------RTLSLSPGLASAVF----LLAFFGFGAKAGMMPLHSWLPRAHPAAPS 240 + + +TL + PG +V LL F G K+ +PLH WLP + P+ Sbjct: 206 YRTVFAAVPHLIGQTLEIIPGHPWSVLTWIALLLFVGAMGKSAQVPLHVWLPESM-EGPT 264 Query: 241 HASALM-SGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQD 299 SAL+ + MV GIF + +++ + Q+ L +V+ IGA++A L L + D Sbjct: 265 PISALIHAATMVTAGIFMVARMS-PIFEQSATAL---SVVLIIGAVTAFFMGLVGLVQND 320 Query: 300 IKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGA 359 IKR++A+ST+ +G + A+G + A+FHL+ HA FK LLFL A Sbjct: 321 IKRIIAYSTISQLGYMTAALGAS--------------AFSAAIFHLMTHAFFKALLFLAA 366 Query: 360 GAIISRL-HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLS 418 G++I + + D+ KMG L K MP T LIG L++S IPP GF S + L Sbjct: 367 GSVIHAMSNEQDIRKMGGLRKVMPITYITFLIGSLSLSGIPPFAGFFS-----KDLI--- 418 Query: 419 RVEAVALQ-LAGPIAMVMLAVTGGLAVMCFV-KMYGITFCGAPRSTHAEEA--QEVPNTM 474 +EAV L L G + V G + +M+ + F GAPR A E P + Sbjct: 419 -IEAVGLSTLPGAGWAEWMLVAGAFVTALYTFRMFFLVFHGAPRMDAHTRAHLHESPWVI 477 Query: 475 IVAMLLLA 482 V ++ LA Sbjct: 478 TVPLIALA 485 >UniRef50_B5IC99 NADH-Ubiquinone/plastoquinone (Complex I), domain protein n=2 Tax=Aciduliprofundum boonei T469 RepID=B5IC99_9EURY Length = 595 Score = 142 bits (357), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 112/381 (29%), Positives = 197/381 (51%), Gaps = 22/381 (5%) Query: 70 FADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALL 129 FA L + +S + +++ S+ + SLYSL Y ++ G A+ F +M +L Sbjct: 39 FAFLGEIGNEISGYFIILSSIAWLFLSLYSLGYDKK-SGLLASTFAFTT----GAMTIIL 93 Query: 130 VMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRES 189 NA F++ +E M+++S+ + +D S A ++ ++LI+ F ES Sbjct: 94 TSTNALSFLIGWEGMTIASFVSIYLHKD--SKRAAYMFLAFGELSTLLILTGFAWASAES 151 Query: 190 GSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGV 249 GS+ F+++ L G S ++LL GF K ++P H WLP AH AP++ S+ +S V Sbjct: 152 GSIIFSAWHAL----GNWSLIYLLLALGFMIKMAVVPFHIWLPEAHSKAPANMSSQLSAV 207 Query: 250 MVKIGIFGILKVAMDLLAQTGLPLWW-GILVMAIGAISALLGVLYALAEQDIKRLLAWST 308 M +G+FG++ Q G+P W G++++ +G I+A++G YA +K+L A+ST Sbjct: 208 MTLMGLFGMIS-----FLQFGIPASWVGLVILIMGGITAIIGAFYAAVCDHVKKLPAYST 262 Query: 309 VENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHT 368 VEN G+++ VG +V + + + LL LF H + K LLF A+ L Sbjct: 263 VENDGVLIAMVGALIVTYEVQQVIGGFI-LLALLFFAFAHTIAKSLLF----AVAGHLEK 317 Query: 369 HDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLA 428 E +G WTA A + ++++ +PPL GFI EW +S+F + + ++L Sbjct: 318 SGGEYLGNKYSLTRWTALAGYLAAISLAGVPPLPGFIGEWAALESMFQSFYISDILVRLV 377 Query: 429 GPIAMVMLAVTGGLAVMCFVK 449 + ++A+T G++++ K Sbjct: 378 TVVIGALVALTAGISIIAMSK 398 >UniRef50_B4SLF9 NADH dehydrogenase (Quinone) n=20 Tax=cellular organisms RepID=B4SLF9_STRM5 Length = 943 Score = 142 bits (357), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 146/448 (32%), Positives = 220/448 (49%), Gaps = 45/448 (10%) Query: 72 DLTLRMDSLS---AFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVAL 128 D TLR+D L+ A +VL I LVV+ + Y L+ A ++ +F+ +M+ + Sbjct: 71 DFTLRLDGLAWMFAGLVLGIGALVVLYARYYLS-----SQDNAHRFYTYLLLFMGAMLGM 125 Query: 129 LVMDNAFWFIVLFEMMSLSSWFLV---IARQDKTSINAGMLYFFIAHAGSVLIMIAFLLM 185 +V N ++ +EM S+SS+ L+ RQD + I G + ++ LL+ Sbjct: 126 VVSGNLLLLMIFWEMTSISSFLLIGFWSHRQDAR--EGARMALVITGGGGLALLGGVLLI 183 Query: 186 GRESGSLDFASFRTLSLSPG---LASAVFLLAFF----GFGAKAGMMPLHSWLPRAHPAA 238 GR GS D + L+ G ASA++ A F G K+ P H WLP A AA Sbjct: 184 GRIVGSFDL----DVVLAAGEQIRASALYPYALFLVLAGIFTKSAQFPFHFWLPHAM-AA 238 Query: 239 PSHASA-LMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAE 297 P+ SA L S MVK G+F +L LA + L + V IGA++ L+G A+ + Sbjct: 239 PTPVSAYLHSATMVKAGVF-LLARLHPALAGSDLFFY---TVSGIGALTLLIGAWNAIFQ 294 Query: 298 QDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFL 357 D+K LLA+ST+ ++G+I L G L P+ V G+ FH+LNHA FK LF+ Sbjct: 295 HDLKGLLAYSTISHLGLITLLFG-------LSTPMAVVAGV----FHILNHATFKASLFM 343 Query: 358 GAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSL 417 AG I T DM K+G L + MP+T+A +I LA++ IP LNGF+S+ + + Sbjct: 344 AAGIIDHETGTRDMRKLGGLRRLMPFTSALAIIASLAMAGIPLLNGFLSKEMLFAEALTA 403 Query: 418 SRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVA 477 A++ A IA ++ V G + FV TF G E P M V Sbjct: 404 GGGPG-AMRTAVSIAALLAGVFGVAYSLRFVH---DTFFGPGPHDLDRVPHEPPRWMKVP 459 Query: 478 MLLLAALCVLIALSASWLAPKIMHIAHA 505 + LL +CV + ++ + ++H A A Sbjct: 460 VELLVVICVAVGIAPALTVAPVLHAAAA 487 >UniRef50_B0BZT2 Proton-translocating NAD(P)H-quinone oxidoreductase, chain L n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0BZT2_ACAM1 Length = 671 Score = 142 bits (357), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 119/425 (28%), Positives = 201/425 (47%), Gaps = 45/425 (10%) Query: 77 MDSLSAFMVLVISLLVVVCSLYSLTYM--REYEGKGAAAMGFFMNIFIASMVALLVMDNA 134 +D LSA ++ V++++ + +YS+ YM +Y + A ++++F+A+M+ L++ +N Sbjct: 78 LDPLSATLLFVVTVIGTLIQVYSIGYMHGEKYYHRFFA----YVSLFMAAMLTLVIANNY 133 Query: 135 FWFIVLFEMMSLSSWFLV-IARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLD 193 + + +E+M L S+ L+ ++ NA F G V + + + + G+L Sbjct: 134 VQYFMAWEVMGLCSYLLIGFYFHKDSAANASRKAFLTTRVGDVGLFLGIMTLFVTGGTLS 193 Query: 194 FASF-RTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALM-SGVMV 251 F + L L F G K+ PLH WLP A P+ SAL+ + MV Sbjct: 194 FVDLPNAVETGAPLLWLAAPLIFCGTVGKSAQFPLHVWLPDAM-EGPTPVSALIHAATMV 252 Query: 252 KIGIFGILKVAMDLLAQTGLPL---WWGILVMAIGAISALLGVLYALAEQDIKRLLAWST 308 G++ VA + T P+ W VM IG ++A + AL DIK++LA+ST Sbjct: 253 AAGVY---LVARSFVLFTSFPMVMPW----VMGIGTLTAFMAAYIALTATDIKKVLAFST 305 Query: 309 VENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHT 368 + +G ++ A+G+ G+ FHL+ HA FK LLFLGAG++I H Sbjct: 306 ISQLGYMVTAMGLG--------------GMTAGTFHLMTHAFFKALLFLGAGSVIHGAHE 351 Query: 369 HDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLA 428 D+ ++G L +M T A +I LAI+ +PPL+GF S+ + A Q Sbjct: 352 QDIRQLGGLFSKMKHTGATFVIASLAIAGVPPLSGFWSK----------DEILLEAYQEG 401 Query: 429 GPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLI 488 + +L +T + ++ +TF G R+ A E P M V + LA + + Sbjct: 402 HFVVYGVLLLTAFMTAFYMFRLVFMTFFGKARNPEI-HAHESPALMTVPLWCLAIGAIFV 460 Query: 489 ALSAS 493 + S Sbjct: 461 GIPGS 465 >UniRef50_C1XWY3 Formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XWY3_9DEIN Length = 602 Score = 141 bits (356), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 166/585 (28%), Positives = 272/585 (46%), Gaps = 70/585 (11%) Query: 77 MDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKG--------AAAMGFFMNIFIASMVAL 128 +D+ + F V ++ L + Y Y+ +E + A + + +F A+MV + Sbjct: 57 LDATAGFYVALLGALYLGVGPYLREYLSHHEPRRTGLGQPDRAKLVACLLPLFAAAMVGV 116 Query: 129 LVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRE 188 ++ + F+ L+E M+L +L+IA + ++ +F + + +A +L+ R+ Sbjct: 117 VLSPPGYTFLFLWEGMALLG-YLLIALEGPAALAGSRAFFLASRLSGAGLFLALVLLTRK 175 Query: 189 SGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSG 248 LS GL + V+ GFG KA + P +WLP+AHP A S SAL+SG Sbjct: 176 E-----------PLSGGLENLVWAGLVLGFGTKAALFPFSTWLPKAHPVAMSPLSALLSG 224 Query: 249 VMVKIGIFGILKVAMDLLAQTG-LPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWS 307 MVK+G++G+ + A G P W G L++ +G A+ ++ LAE+D K +LA+S Sbjct: 225 GMVKLGLYGLYRAQ----AWVGPAPGWVGWLLVGLGLAGAVYALVRGLAEEDYKGVLAYS 280 Query: 308 TVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLH 367 +VEN+ ++L A+G + L P LL FH HALFKGLLFLG+GA+ R Sbjct: 281 SVENLNLLLAALGAYFL---LKSPFF----LLAFFFHQAAHALFKGLLFLGSGALPVR-- 331 Query: 368 THDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQL 427 ++ ++G L + +P TAA + LA + +PPL GF+ EWY +Q + + L Sbjct: 332 --ELSRLGGLHRLLPRTAAWSFLAALAAAGLPPLAGFLFEWYLYQGFLAAPKGTGALSLL 389 Query: 428 AGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVL 487 + + +A+ G LA + +V+++G+ F G PRS A EA E+ + M +LA L Sbjct: 390 V--LGVGAVALVGALAAVSYVRLFGLAFLGQPRSLEAGEAHELGIFGQLGMGILAGLL-- 445 Query: 488 IALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGL 547 +G++L P + P L +L L + LL Sbjct: 446 ----------------------------TGLSLFPAALLRPLEPPLYPVLSLFLALLGLG 477 Query: 548 YWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSA-LFRLRQQLDPTLR 606 L R +R D W CG+ + MQP + +S L RL ++ LR Sbjct: 478 GGLVYLLGRKP-QRAYDTWDCGFNQPGLAGSALTPQMQPHALGYSEQLLRLFPFVELNLR 536 Query: 607 LNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGD 651 L++G R + W + + + +Q LQSG Sbjct: 537 LSRGGLLDPPRVRLEVGDWLLALETRLALGYTAFVRRVQLLQSGS 581 >UniRef50_D2RZ77 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Haloterrigena turkmenica DSM 5511 RepID=D2RZ77_9EURY Length = 681 Score = 141 bits (356), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 123/421 (29%), Positives = 200/421 (47%), Gaps = 55/421 (13%) Query: 75 LRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNA 134 L +D LSA M++++SL+ + ++SL YM + G + +F SM+A + DN Sbjct: 92 LLIDPLSALMLIIVSLVAFLVHVFSLGYMNDEGETGLPRYYASLGLFTFSMLAFVYADNL 151 Query: 135 FWFIVLFEMMSLSSWFLV-IARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLD 193 + FE++ L S+ L+ + K++ +A F + G +I + + G++ Sbjct: 152 LMAFMFFELVGLCSYLLIGFWFRTKSAPSAAKKAFLVTRFGDYFFLIGVVAIASTFGTVA 211 Query: 194 FASFRTLSLSPGLA----SAVF------------LLAFFGFGAKAGMMPLHSWLPRAHPA 237 FA + ++ A + +F LL G K+ PLH+WLP A Sbjct: 212 FAGEESFVVAAETAIEDGTTLFGFDAQTWVTITGLLVLGGVIGKSAQFPLHTWLPDAME- 270 Query: 238 APSHASALM-SGVMVKIGIFGILKV-AMDLLAQTGLPLWWGILVMAIGAISALLGVLYAL 295 P+ SAL+ + MV G++ + ++ L+ T L ++ +G +AL + Sbjct: 271 GPTTVSALIHAATMVAAGVYLVARMFGYYALSPTALA-----IIAFVGGFTALFAATMGV 325 Query: 296 AEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLL 355 + DIK++LA+ST+ G ++L +GV G + +FHL+NHA FK LL Sbjct: 326 VKDDIKQVLAYSTISQYGYMMLGMGVG--------------GYVAGVFHLMNHAFFKALL 371 Query: 356 FLGAGAIISRL-HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSL 414 FLG+GA+I + H DM KMG L + P T L G LA++ I P +GF W + L Sbjct: 372 FLGSGAVIVLMHHEQDMWKMGGLKDKAPVTYYTFLAGALALAGIVPFSGF---WSKDEVL 428 Query: 415 FSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYG-----ITFCGAPRSTHAEEAQE 469 F +A+ + L P+ + A+ GL + F Y +TF G PRS AE Sbjct: 429 F-----DALIVGLEEPVILAAYAM--GLLGVFFTGFYTFRMVFLTFHGEPRSETAENPHG 481 Query: 470 V 470 V Sbjct: 482 V 482 >UniRef50_A7ZBL2 Hydrogenase-4 component F n=6 Tax=Epsilonproteobacteria RepID=A7ZBL2_CAMC1 Length = 493 Score = 141 bits (356), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 124/450 (27%), Positives = 207/450 (46%), Gaps = 64/450 (14%) Query: 72 DLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMR-EYEG--------KGAAAMGFFMNIFI 122 D L +DSL +++I++ + + YS+ YMR E E K A+ ++FI Sbjct: 60 DKFLFLDSLGCVFLVLIAVTGFIVNFYSIHYMRWELEDGHIHLSDLKKYYALS---HVFI 116 Query: 123 ASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAF 182 +M ++ +N + E +L+S FLV +D+ S +G Y + G + A Sbjct: 117 FTMTLSVICNNVAFMWAAIEATTLASVFLVAIHKDQKSTESGYKYIVLCSIGLAFALYAT 176 Query: 183 LLM--------GRESGSLDFASF--RTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLP 232 +L+ G S+ F+S +L+P A +F+ A GFG KAG+ P H+WLP Sbjct: 177 VLLYSATYSTLGDGEASMQFSSIMANAKNLNPDAAKLIFVFALIGFGTKAGLAPTHTWLP 236 Query: 233 RAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVL 292 H P+ SAL+SGV++K + +L+ G G+++++ G I+ + Sbjct: 237 DVHAEGPAPISALLSGVLLKCAMLALLRYYAITAQAVGFSFVEGVMIVS-GTITLFVAGF 295 Query: 293 YALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFK 352 + + + ++KR+ A+ ++ ++G+I A+GV GL A+FH L H+ K Sbjct: 296 FLIRQHNVKRMFAYHSIVHMGVIAFALGVG-----------GKFGLFAAIFHCLAHSFTK 344 Query: 353 GLLFLGAGAIISRLHTH-DMEKMGALAKRMPWT-----AAACLIGCLAISAIPPLNGFIS 406 L F G I+R++ H DM KMG + K P T AA C ++ +P F+S Sbjct: 345 ALAFCSTGN-IARIYGHKDMSKMGGMVKIAPITTIMFGAAVC-----SLVGVPAFAIFVS 398 Query: 407 EWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRS--THA 464 E+ + + + AVAL A +A++ +A + F G P+ H Sbjct: 399 EYNVFVGAITSGQYIAVAL-FAIALAVIFIADFAHFNMASF---------GEPKGVVVHN 448 Query: 465 EEAQEVPNTMIVAMLLLAALCVLIALSASW 494 +E N L L ALC LI + W Sbjct: 449 KEMSLFEN------LPLIALCALIIIFGVW 472 >UniRef50_B5IAP3 NADH-Ubiquinone/plastoquinone (Complex I), domain protein n=2 Tax=Aciduliprofundum boonei T469 RepID=B5IAP3_9EURY Length = 472 Score = 141 bits (355), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 104/383 (27%), Positives = 185/383 (48%), Gaps = 27/383 (7%) Query: 55 HAGVTLVARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAM 114 H ++ F PP + L + L A + L+I+++ + S+Y+L + E + Sbjct: 54 HPIFDIIGGFQPPL---GIVLMVGPLGAIIALIINIVAFIISIYNL----KVEKEPIVKY 106 Query: 115 GFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAG 174 + + +++ + F V E+ S++S+ L +DK M Y I G Sbjct: 107 SMLYLLLVMGSTGMVLTGDLFNLFVFLEVTSIASYGLAAYNKDKEGFMGAMKYVIIGSIG 166 Query: 175 SVLIMIAFLLMG---RESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWL 231 S ++I L+ R LD A+ R ++ P + F F GFG +A M PL++W+ Sbjct: 167 STFVLIGITLIYSQLRTLNMLDIAA-RIGTMDPYVKIIAFTSLFLGFGVEAEMFPLNTWV 225 Query: 232 PRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGV 291 P A+ AP SA + + K GIF + +V + + T LW+ V+ +G ++ G Sbjct: 226 PDAYDGAPHPISAAFASLPAKAGIFALARVIFTMFSFTNF-LWF---VVIMGLLTVFFGE 281 Query: 292 LYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALF 351 + A ++++K++LA+S++ +G+I++ +G+ T + + GA + ++ HAL Sbjct: 282 IIAYTQKNLKKMLAYSSIGQMGMIIMGLGIG-----------TTLAVEGAFYQMIAHALG 330 Query: 352 KGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTW 411 K LLF+ AG +I ++ +E M +A R P LIG L+I +PP GF +++ Sbjct: 331 KALLFIAAGFLIYAAKSNKIEDMKGMA-RNPLIGIPLLIGALSIMGMPPFAGFYGKFFIL 389 Query: 412 QSLFSLSRVEAVALQLAGPIAMV 434 FS +AL LA I V Sbjct: 390 MGGFSQGYYAIIALFLAASIVEV 412 >UniRef50_A6UFL0 NADH dehydrogenase (Quinone) n=7 Tax=Proteobacteria RepID=A6UFL0_SINMW Length = 586 Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 128/423 (30%), Positives = 204/423 (48%), Gaps = 57/423 (13%) Query: 73 LTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMD 132 L ++D LS V +++ ++ ++Y+L G G F +++ S + ++ Sbjct: 60 LIAKVDKLSIVFATVFTIMALIGTVYAL----HLSGAGEHVAAF---VYVGSALGVVFAG 112 Query: 133 NAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSL 192 + + +E M+ +S +LV A+ +I A Y + G V+++ LL G +GSL Sbjct: 113 DYLTLYLFWEGMAFASAYLVFAQGAGQAIRAAFRYLMVHVTGGVVLLGGILLHGAAAGSL 172 Query: 193 DFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVK 252 F +L G A +LA GF A + PL++WL A+P A + MS K Sbjct: 173 LFGPVEG-ALDAG---AYLILA--GFLLNAAVPPLNAWLTDAYPEATVTGAVFMSAFTTK 226 Query: 253 IGIFGILKV--AMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVE 310 ++ + + ++LL +W +G + AL GV+YA+ E D +RLLA+ V Sbjct: 227 TAVYVLARAFPGIELL------VW-------LGTVMALYGVIYAVLENDCRRLLAYHIVS 273 Query: 311 NVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHD 370 VG ++ +G+ T + + GA H H L+KGLLF+GAGA+I Sbjct: 274 QVGYMVAGIGIG-----------TELAVNGATSHAFAHILYKGLLFMGAGAVIYVTGRRK 322 Query: 371 MEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGP 430 + ++G L K MP T A + G LAISA P +GF+S+ S V A A Q Sbjct: 323 LSELGGLYKAMPLTVAFYMAGALAISAFPFFSGFVSK----------SMVIAAAAQ--DH 370 Query: 431 IAMVMLAVT---GGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVL 487 A+VMLA+T G + +K+ F G R +A+E P M+VAM + AALC+ Sbjct: 371 RALVMLALTMASSGTFLHTGLKLPYYMFLGTDRGL---QAREPPGNMLVAMGVAAALCIA 427 Query: 488 IAL 490 I + Sbjct: 428 IGI 430 >UniRef50_D2QSX4 Proton-translocating NADH-quinone oxidoreductase, chain L n=2 Tax=Bacteroidetes RepID=D2QSX4_9SPHI Length = 642 Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 127/427 (29%), Positives = 211/427 (49%), Gaps = 45/427 (10%) Query: 72 DLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVM 131 + + ++D LS M+LV++ + + LYS+ YM EG G F+N+FI M+ L++ Sbjct: 84 NFSFQIDQLSLLMLLVVTGVGSLIHLYSIGYMSHDEGFGKFMA--FLNLFIFFMLLLVMG 141 Query: 132 DNAFWFIVLFEMMSLSSWFLV-IARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESG 190 N + +E + L S+ L+ ++ + NA F + G + ++ ++ G Sbjct: 142 SNYVIMFIGWEGVGLCSYLLIGFWNKNISYNNAARKAFVMNRIGDLGFLLGIFMLINTFG 201 Query: 191 SLDFASF--RTLSLSPGLAS--AVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALM 246 ++++ + SL+ G + A+ LL F G K+ +PL++WLP A A P+ SAL+ Sbjct: 202 TVEYVDIFKQATSLAVGDKTILAITLLLFVGAMGKSAQVPLYTWLPDAM-AGPTPVSALI 260 Query: 247 -SGVMVKIGIFGILKV-AMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLL 304 + MV GI+ +++ + LA L + GI + ++ALL L + DIK++L Sbjct: 261 HAATMVTAGIYMVVRSNVLYTLAPLTLEIIGGIAI-----VTALLAASIGLLQNDIKKVL 315 Query: 305 AWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIIS 364 A+STV +G + L L+ +FH++ HA FK LLFLGAG++I Sbjct: 316 AYSTVSQLGYMFLG--------------LSATAYTAGMFHVITHAFFKALLFLGAGSVIH 361 Query: 365 RL-HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAV 423 + D+ KMG L K +P T LIG +AIS +PP GF S+ +F +++ Sbjct: 362 AMSDEQDIRKMGGLRKALPVTFITFLIGTIAISGLPPFAGFFSKDEILAHVFEHNKL--- 418 Query: 424 ALQLAGPIAMVMLAVTG-GLAVMCFVKMYGITFCGAPRSTHAEEA--QEVPNTMIVAMLL 480 L G L V G GL ++ +TF G R T + E P TM +++ Sbjct: 419 ---LWG------LGVLGSGLTSFYMFRLLFLTFFGEFRGTEEQRHHLHESPATMTAPLVV 469 Query: 481 LAALCVL 487 LA L ++ Sbjct: 470 LAILSII 476 >UniRef50_Q2C5U2 NADH-plastoquinone oxidoreductase, chain 5 n=2 Tax=Photobacterium RepID=Q2C5U2_9GAMM Length = 626 Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 108/337 (32%), Positives = 171/337 (50%), Gaps = 32/337 (9%) Query: 72 DLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVM 131 ++ L +D LS M+ V S + + L+S+ +MR G+ ++N+F+A M+ ++ Sbjct: 75 NIGLSVDRLSLVMITVTSWVGFLIHLFSVPFMRRDFGERRYFC--YLNLFVAGMLFFVMA 132 Query: 132 DNAFWFIVLFEMMSLSSWFLVIARQDK-TSINAGMLYFFIAHAGSVLIMIAFLLMGRESG 190 DN +E+M L S+ L+ +K ++ +G F + G L+ I LL Sbjct: 133 DNLILLYTGWEIMGLCSYGLISHYYNKEKNVYSGRKAFVVTRIGDTLLAIGILLAFTVFK 192 Query: 191 SLDFASFRTL----SLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALM 246 +++ T+ S++ L A+ LL FG AK+ P H WLP + A PS SAL+ Sbjct: 193 TVNLNEIYTIASQQSMNLWLIGAICLLFLFGGMAKSAQFPFHVWLPESM-AGPSTVSALI 251 Query: 247 -SGVMVKIGIFGILK--VAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRL 303 + MV G++ I + V +L+ WW V +GA +A ALA+ DIKR+ Sbjct: 252 HAATMVTAGVYLIARNHVLFNLVPDV---TWW---VSLVGAFTAFYAATCALAQNDIKRI 305 Query: 304 LAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAII 363 LA+ST+ +G + A+GV L A+FH++ HA FK LLF+ +G II Sbjct: 306 LAYSTISQIGYMFAALGVGAYDL--------------AIFHVIVHACFKALLFISSGVII 351 Query: 364 SRL-HTHDMEKMGALAKRMPWTAAACLIGCLAISAIP 399 H HD+ KMG L KR+PW L G +++A+P Sbjct: 352 DMFNHDHDIRKMGGLGKRLPWLKWTYLAGSASLAALP 388 >UniRef50_B1KJV8 Proton-translocating NADH-quinone oxidoreductase, chain L n=2 Tax=Shewanella RepID=B1KJV8_SHEWM Length = 622 Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 116/360 (32%), Positives = 181/360 (50%), Gaps = 54/360 (15%) Query: 72 DLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFF--MNIFIASMVALL 129 TL +D LS M+ +I+ + + LYS +YM+E A FF +N+F+++M+ L+ Sbjct: 75 SFTLYLDPLSLVMITIITCIGALIHLYSASYMKE----DADICRFFVYLNLFVSAMLFLV 130 Query: 130 VMDNAFWFIVLFEMMSLSSWFLV--IARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGR 187 + DN + +E + L S+ L+ R+ K S A F I G ++I +L+ Sbjct: 131 LADNLILLYLGWEGVGLCSYLLIGFWYREVKNS-QAANKAFIITRIGDTAMLIGIILIFY 189 Query: 188 ESGSLDFASFRTLSL------------SPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAH 235 + +L+ + S + GL S LL F G K+ +PLHSWLP A Sbjct: 190 QFDTLNIQQIQAHSQQLLQNSELLTKGAVGLTSLCCLLLFAGAAGKSAQVPLHSWLPDAM 249 Query: 236 PAAPSHASALM-SGVMVKIGIF------GILKVAMDLLAQTGLPLWWGILVMAIGAISAL 288 A P+ SAL+ + MV GI+ + +A D+L + +G I+ + Sbjct: 250 -AGPTPVSALIHAATMVTAGIYLVARNIELFSLAPDVLH----------FIAIVGVITLI 298 Query: 289 LGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNH 348 LG ALA+ D+KR+LA+ST+ +G + LA+GV A+FHL+ H Sbjct: 299 LGATSALAQTDLKRILAYSTISQLGYMFLALGVGSAS--------------AAVFHLMTH 344 Query: 349 ALFKGLLFLGAGAIISRL-HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISE 407 A FK LLFL AGA+I + H ++ KMG L K P A + IGC A++++P +GF S+ Sbjct: 345 AFFKALLFLSAGALIYCMHHEKNIFKMGGLRKSQPLLALSFGIGCAALASLPMTSGFFSK 404 >UniRef50_B9ZEN4 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Natrialba magadii ATCC 43099 RepID=B9ZEN4_NATMA Length = 678 Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 127/447 (28%), Positives = 215/447 (48%), Gaps = 59/447 (13%) Query: 77 MDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFW 136 +D L+A M++++SL+ + ++SL YM G + +F SM+A + DN Sbjct: 90 IDPLAALMLVIVSLIAFLVHIFSLGYMNAEGETGLPRYYASLGLFTFSMLAFVYADNLLM 149 Query: 137 FIVLFEMMSLSSWFLV-IARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFA 195 + FE++ L S+ L+ + +++ +A F + G ++ + + G++ FA Sbjct: 150 AFMFFELVGLCSYLLIGFWFRTRSAPSAAKKAFLVTRFGDYFFLLGVVAIAATFGTVAFA 209 Query: 196 ---SFRTLSLSPGLASAVFLLAFFGFGA-----------------KAGMMPLHSWLPRAH 235 SF T + + + L FGFGA K+ PLH+WLP A Sbjct: 210 GDNSFVTAA-ETAIDNGDTL---FGFGAETWVTITALLVLGGVIGKSAQFPLHTWLPDAM 265 Query: 236 PAAPSHASALM-SGVMVKIGIFGILKV-AMDLLAQTGLPLWWGILVMAIGAISALLGVLY 293 P+ SAL+ + MV G++ + ++ L+ T L + + +G +AL Sbjct: 266 EG-PTTVSALIHAATMVAAGVYLVARMFGYYALSPTALAI-----IAFVGGFTALFAATM 319 Query: 294 ALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKG 353 + + DIK++LA+ST+ G ++L +GV G + +FHL+NHA FK Sbjct: 320 GVVKDDIKQVLAYSTISQYGYMMLGLGVG--------------GYVAGVFHLMNHAFFKA 365 Query: 354 LLFLGAGAIISRL-HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQ 412 LLFLGAGA+I + H DM KMG L + P T L G LA++ I P +GF W + Sbjct: 366 LLFLGAGAVIVLMHHEQDMWKMGGLKDKAPITYYTFLAGALALAGIIPFSGF---WSKDE 422 Query: 413 SLFS--LSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEV 470 L+ + +E + A +A+V + TG +M +TF G PRS AE+ ++ Sbjct: 423 ILYDALIIGIEEPIILAAYAMALVAVFFTG----FYTFRMVFLTFHGEPRSEAAEDPHDI 478 Query: 471 PNTMIVAMLLLAALCVLIALSASWLAP 497 +M +++L L ++ ++ LAP Sbjct: 479 GWSMKAPLIVLGVLALVAGIAN--LAP 503 >UniRef50_D2LPZ8 NADH/Ubiquinone/plastoquinone (Complex I) n=3 Tax=Aciduliprofundum boonei T469 RepID=D2LPZ8_9EURY Length = 605 Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 98/288 (34%), Positives = 152/288 (52%), Gaps = 33/288 (11%) Query: 217 GFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWG 276 GFG K ++PLH W P A+ + P S +SG + K+G FGI ++M +A G+ +G Sbjct: 197 GFGVKMAIVPLHVWAPYAYSSEPPFVS-FLSGGLSKLGTFGI-YMSMYSIAGVGILNSFG 254 Query: 277 IL---------VMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLS 327 +GAI+A +G + A+ + DI++LLA+S++ +G + MVGL Sbjct: 255 TFRGVSLLGYPFALLGAITAFVGTILAIFQDDIRKLLAYSSIGQLGYV-------MVGLG 307 Query: 328 LHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAA 387 L T + L GALFH NHA FK LLFLGAGA+I R + + +MG L RMP+T Sbjct: 308 LG----TSLALGGALFHAFNHAFFKSLLFLGAGAVIYRTGKYKISEMGGLGYRMPFTFLF 363 Query: 388 CLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCF 447 L A++ IP +GFIS+W +++ V IA +ML + G + + Sbjct: 364 VLFAIFALAGIPLTSGFISKWMLYEAAIEKKFV---------IIAPLMLIASVGAFLYSY 414 Query: 448 VKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWL 495 +YGI F G + H ++ +E P M+ AM +L ++ ++ W+ Sbjct: 415 RILYGI-FLGELKEEH-KKIKEAPAPMLAAMFILTIPLLVFSIVPGWI 460 >UniRef50_D1Y0I6 Putative NADH dehydrogenase subunit L n=1 Tax=Prevotella bivia JCVIHMP010 RepID=D1Y0I6_9BACT Length = 686 Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 133/455 (29%), Positives = 209/455 (45%), Gaps = 57/455 (12%) Query: 72 DLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMRE---YEGKGAAAMGF-----FMNIFIA 123 ++ R+ +S M++VI+ + + +YS YM E + GF ++++F Sbjct: 101 NIGFRLSPISVMMLVVITTVSFMVHIYSFGYMAERGEHYEFEEYEHGFQRFYAYLSMFTC 160 Query: 124 SMVALLVMDNAFWFIVLFEMMSLSSWFLV-IARQDKTSINAGMLYFFIAHAGSVLIMIAF 182 SM+ L+V N F + +E++ + S+ L+ T+++A F + + +I Sbjct: 161 SMLGLVVATNIFQMYLFWELVGVCSYLLIGFYYPKHTAVHASKKAFIVTRFADLFFLIGI 220 Query: 183 LLMGRESGSLDF---------ASFRTLSLSPGLASAV---FLLAFFGFGAKAGMMPLHSW 230 L G+ ++ + L+ P A A+ L F G K+ M PLH W Sbjct: 221 LFFSFYVGTFNYDLNVNPELTVTLAKLATDPTTAWAIPTALFLMFIGGAGKSAMFPLHIW 280 Query: 231 LPRAHPAAPSHASALM-SGVMVKIGIFGI---LKVAMDLLAQTGLPLWWGILVMAIGAIS 286 LP A P+ SAL+ + MV G+F + L + + AQ L W + I A + Sbjct: 281 LPDAM-EGPTPVSALIHAATMVVAGVFQVASLLPIYLQFGAQEQLH--W---IAWIAAFT 334 Query: 287 ALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMV----------GLSLHDPLLTVV 336 A A A++DIKR LA+ST+ + +L+A+GV G H L Sbjct: 335 AFYAAAVACAQKDIKRGLAFSTISQIAYMLVALGVCFYDAKEGAFGSHGFLHHGGL---- 390 Query: 337 GLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAIS 396 G + A+FHL HA+FK LLFL +GAII + ++ E MG L K MP T LIGCLAI+ Sbjct: 391 GYMAAMFHLFTHAMFKALLFLCSGAIIVIIGSNFKEYMGGLHKYMPITNICFLIGCLAIA 450 Query: 397 AIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFC 456 IPP GF S+ + +L E AL+ ++ + G+ ++Y + F Sbjct: 451 GIPPFAGFFSKDEIISACNALPGAEGQALKW-------IMTLVAGMTAFYMFRLYYVIFW 503 Query: 457 GAP----RSTHAEEAQEVPNTMIVAMLLLAAL-CV 486 G H QEVP M ++ LA + CV Sbjct: 504 GQSYYELDPEHRRRPQEVPFVMWGPLVFLAIISCV 538 >UniRef50_A6Q8K1 NADH-quinone oxidoreductase, chain M n=3 Tax=Epsilonproteobacteria RepID=A6Q8K1_SULNB Length = 479 Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 103/341 (30%), Positives = 184/341 (53%), Gaps = 24/341 (7%) Query: 68 FEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVA 127 F+F L+L++D LS M+++ S L+++ +L S T M++ + + +F + Sbjct: 67 FDFI-LSLQVDRLSVVMLILTSALLILVTLSSWT-MKDPRNYFS-----LLVLFSGPIFG 119 Query: 128 LLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGR 187 + + N WF + +E+ + +FLV + I A + +F H S+LI++AF L+ + Sbjct: 120 VFMSTNLLWFFIFWELTLVPMFFLVGIWGAEGRIYAAVKFFLYTHVASMLILLAFFLIYK 179 Query: 188 ESGSLDFASFRTLSLS-PGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALM 246 E+G D + LS P L V+ L F GF K + P H+WLP AH AP+ SAL+ Sbjct: 180 ETGIFDMTMVKEAMLSTPVL---VWWLLFIGFAVKMPIFPFHTWLPDAHVQAPAPVSALL 236 Query: 247 SGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAW 306 +GV++K+G + ++++ + +L + W ILV+ G ++ AL E +K+++A+ Sbjct: 237 AGVLLKMGAYAMIRMVVLMLPEQSEHFAWVILVL--GLVTLFYAGFMALYETHLKKMVAY 294 Query: 307 STVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRL 366 S++ ++G++ +A+ L+ GL AL+ ++ HAL LFL AG + SR Sbjct: 295 SSISHMGLVTVAIAT-----------LSYAGLSAALYEMIGHALIISPLFLIAGFLHSRT 343 Query: 367 HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISE 407 + M+ MG L ++ P+ +A ++ LA +P GFI E Sbjct: 344 GSWQMKDMGGLMQKAPYLSAIFVLAGLAALGLPGTMGFIGE 384 >UniRef50_A4YHZ0 NADH dehydrogenase (Quinone) n=2 Tax=cellular organisms RepID=A4YHZ0_METS5 Length = 1152 Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 131/427 (30%), Positives = 215/427 (50%), Gaps = 52/427 (12%) Query: 85 VLVISLLVVVCSLYSLTYMRE-YEGKGAAAMGFFM---NIFIASMVALLVMDNAFWFIVL 140 +L ++LL + YSL YM E + G+ G F ++F SM+ ++ N + Sbjct: 74 ILAVTLLTIP---YSLRYMEERFHELGSGNWGLFFGLYSLFSVSMLYTVLSTNLLEIYIF 130 Query: 141 FEMMSLSSWFLVI--ARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFAS-- 196 E+ ++S+ L++ D+ I+ +LYF H G+VL++ + +++G E+GS+D S Sbjct: 131 LEIALVTSFLLIMLYGYGDRRRIS--LLYFIWTHVGTVLLLASVIVIGLETGSMDVYSAL 188 Query: 197 --FRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIG 254 F S + G A A+FLLA G K ++ WLP AH AP+ S L+S MV +G Sbjct: 189 NVFHDYS-TVGYAVAIFLLAVIGMMVKGAQAGVNVWLPYAHGEAPTPISVLLSPNMVGLG 247 Query: 255 IFGILKV-----AMDLLAQTGLPLW--WGILVMAIGAISALLGVLYALAEQDIKRLLAWS 307 +F ++ M LA P++ W +L M G I+AL A++D KR LA+S Sbjct: 248 VFVVILYFYMFPGMSFLA----PIFVGWALLTMIYGGINAL-------AQRDFKRFLAYS 296 Query: 308 TVENVGIILLAVGVA-MVGLSLHDPLLTV---VGLLGALFHLLNHALFKGLLFLGAGAII 363 +V +G ++L GVA ++GL PL V +G++ + ++H K LLF+ AGA I Sbjct: 297 SVSQMGYMMLGAGVAFLMGL----PLTLVSLPLGIIASALIYVSHGFGKALLFMSAGANI 352 Query: 364 SRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAV 423 + H D+EK+G L + P +G L I +PP G ISE + L + + Sbjct: 353 TEAHERDIEKLGGLYQTSPLHTTLSFLGLLNILGLPPTVGLISEVLLLFATGELVQKVGI 412 Query: 424 ALQLAGPIAM-VMLAVTGGLAVMCFVKMYGITFCGAPRS-THAEEAQEVPNTMIVAMLLL 481 + L +A+ + + ++ A F K+Y G P++ ++ E V ML+L Sbjct: 413 SWFLVVVVALFIAIGLSSAYATYLFKKVY----AGKPQNPVSLDKIAEYS----VPMLIL 464 Query: 482 AALCVLI 488 A L V++ Sbjct: 465 AGLSVVL 471 Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 91/372 (24%), Positives = 156/372 (41%), Gaps = 60/372 (16%) Query: 88 ISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLS 147 +S L +YS+ YMRE + GFF F++SM+A+++ +N F+ +E SL+ Sbjct: 579 VSTLSFFIGIYSVGYMRE-DNVLRRYWGFF-GFFVSSMLAVVLSNNILLFMAGWEGTSLA 636 Query: 148 SWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESG--SLDFAS--------- 196 S+ L+ D N + G + + FL SG ++ F Sbjct: 637 SYGLISYWLDDNEKNV------VGDKGRFVFNMEFLSKPTTSGIRAMIFTRVGDVGLLLG 690 Query: 197 -------------------FRTLSLSPGLAS------------AVFLLAFFGFGAKAGMM 225 F + PG+ + +L F G +K+ Sbjct: 691 LGYLVYLTSTSTLTGSTMLFTQVGSLPGVFQVLGEMATLPFGLTMLILLFLGGLSKSAQF 750 Query: 226 PLHSWLPRAHPAAPSHASALM-SGVMVKIG-IFGILK---VAMDLLAQ-TGLPLWWGILV 279 P WL A P+ SAL+ + MV +G +F L +A +Q G L + ++ Sbjct: 751 PFTQWLVTAM-TGPTPVSALIHAATMVNLGAMFTFLTYPYLAFQANSQDVGTLLTFFSVM 809 Query: 280 MAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDP--LLTVVG 337 I +AL L AL + K +LA ST + + +++ A + V L++ D +L G Sbjct: 810 AGISLFTALYTSLNALVSNEQKVVLANSTADQISLMIFASSMGGV-LAILDGNLILLFSG 868 Query: 338 LLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISA 397 + L ++ H ++K LF+ AG++I + M + L + + W LI L ++ Sbjct: 869 IAIGLIQMIAHGIYKASLFMNAGSVIHYTESRYMGTVSGLYRELKWVFILQLIAALNLAN 928 Query: 398 IPPLNGFISEWY 409 +PPL GF + Y Sbjct: 929 VPPLVGFWAHSY 940 >UniRef50_C0GJ39 NADH dehydrogenase (Quinone) n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJ39_9FIRM Length = 487 Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 105/351 (29%), Positives = 180/351 (51%), Gaps = 31/351 (8%) Query: 66 PPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASM 125 PPF L++++D LS + L+ V +LY+ TY + + A+ F+ +A Sbjct: 69 PPF---GLSIQIDLLSLSLALLFLFCGAVLALYTATYPLKQGYRRFKAIFLFI---LACA 122 Query: 126 VALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLM 185 +++ + + FE MSLS + LVI + + ++ A M + ++ GSVL +A ++ Sbjct: 123 TGVVLAGDLLTLFLFFEAMSLSFFLLVIHHRTREAVAATMKFLYMTVGGSVLYFMALAVV 182 Query: 186 GRESGSLDF--ASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHAS 243 +S + + F T LA F +AF G KAGM PLH W+ + AP A Sbjct: 183 FVQSQNFSWQDGGFMTAGAYTSLAFVGFAIAF---GMKAGMFPLHLWMADVYGQAPPPAV 239 Query: 244 ALMSGVMVKIGIFGILKV-----AMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQ 298 AL S +M+K G +G++++ ++L+ + G W ++++ + IS + G L A AE+ Sbjct: 240 ALSSMIMLKTGAYGMIRIFHQVFGVELIREQG----WHVVILVLAIISIIYGSLCAFAER 295 Query: 299 DIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLG 358 D+ R LA+S + +G IL + LLT L+G ++H++ HA+ KG L L Sbjct: 296 DLPRRLAYSGIAQLGYILFGI-----------SLLTSEALIGGVYHIMGHAMMKGTLLLC 344 Query: 359 AGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWY 409 AGAI+++ + + + +MP T + L +PP+N FIS+WY Sbjct: 345 AGAILAKTGKRKIADLAGIGWQMPLTMSCFSFAALTAVGLPPMNIFISKWY 395 >UniRef50_B2ULN9 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2ULN9_AKKM8 Length = 610 Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 124/411 (30%), Positives = 206/411 (50%), Gaps = 37/411 (9%) Query: 72 DLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFF--MNIFIASMVALL 129 DL +D LS+ M+LV++ + ++ ++SL YM + + K +F +++F+ SM ++ Sbjct: 73 DLGFVLDPLSSRMMLVVTGIGLLVHVFSLGYMADDKAKTR----YFACLSLFMFSMTGIV 128 Query: 130 VMDNAFWFIVLFEMMSLSSWFLVIA-RQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRE 188 + +N + +E++ LSS+ L+ T+ NA F G +I L + Sbjct: 129 LANNIAMTFIFWELVGLSSYLLIGHWYTRDTAANAAKKAFICNRVGDFGFLIGILTLWAL 188 Query: 189 SGSLDFASFRT-LSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALM- 246 + +LDF+ +S L + L F G K+ PLH WLP A P+ SAL+ Sbjct: 189 TNTLDFSLMEIPAGISENLLNITVLCLFCGAVGKSAQFPLHVWLPDAMEG-PTPVSALIH 247 Query: 247 SGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAW 306 + MV G++ +++V + + P ++ IGAI+A++ A + DIKR+LA+ Sbjct: 248 AATMVAAGVYMMVRVQYSIGIE-AFPALACNVIAGIGAITAVIAAFMATQQNDIKRVLAY 306 Query: 307 STVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAII-SR 365 ST+ +G +++A+G+ + G + A+FHL HA FK LLFLGAGAII + Sbjct: 307 STLSQLGYMVMALGL-LAGEA-------------AMFHLFTHAWFKALLFLGAGAIIFAC 352 Query: 366 LHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVAL 425 H D+ KMG + KRM T+ +I +A+ AIP +GF FS + AL Sbjct: 353 HHEQDIWKMGGIMKRMKLTSLTFIIATMALIAIPFTSGF----------FSKEAILEAAL 402 Query: 426 QLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIV 476 + P+ + A L +++ + F G RS +E A EV M+V Sbjct: 403 R-KNPVFFWIGAGVALLTTFYMMRVIFVVFFGKSRSHSSEHASEVGGLMLV 452 >UniRef50_C7MLM5 Formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit n=4 Tax=Bacteria RepID=C7MLM5_CRYCD Length = 533 Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 107/357 (29%), Positives = 172/357 (48%), Gaps = 28/357 (7%) Query: 67 PFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKG------AAAMGFFMNI 120 P + + L +D+L + V +I ++ + LYS+ Y+R G F ++ Sbjct: 62 PVDALGMWLHLDALGSVFVALIGVIGFLTGLYSVPYVRNDVAIGHMNNARVKQFYLFFSL 121 Query: 121 FIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMI 180 FI +M+ + +N V E +LS+ FLV A K S+ A Y + AG + Sbjct: 122 FIFTMLVVATSNNIILMWVGIEATTLSTVFLVGAYDAKLSLEAAWKYVIVCTAGVAFGLY 181 Query: 181 AFLLMGRESGSL----DFASFRT------LSLSPGLASAVFLLAFFGFGAKAGMMPLHSW 230 + +L+ + + A F T L L F+ A GFG KAG+ P+H+W Sbjct: 182 STVLIYANAADVMANPHEAIFMTSIMPYATQLDGMLVQVAFVFAAIGFGTKAGLFPMHTW 241 Query: 231 LPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLG 290 LP AH APS S L+SGV++K + I++ + L Q+ + ++++ IG +S + Sbjct: 242 LPDAHSEAPSPVSGLLSGVLLKCAMLIIMRFYI-LACQSIGSQFPRLVMLIIGILSVFMA 300 Query: 291 VLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHAL 350 L ++ D+KR LA+ + ENVGI+ L +G PL G+ AL H + H Sbjct: 301 ALAVFSQDDLKRKLAYHSCENVGIVALFLGFG-------GPL----GIAAALLHCITHGF 349 Query: 351 FKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISE 407 K LLF +G ++ + T D+ K+ + K MP T IG A++ PP F+SE Sbjct: 350 TKALLFCISGNVLMKYGTRDLNKISGILKTMPATGVLMSIGFFALAGFPPFAMFVSE 406 >UniRef50_Q1IZW2 NADH-quinone oxidoreductase, L subunit n=3 Tax=Deinococcus RepID=Q1IZW2_DEIGD Length = 639 Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 156/509 (30%), Positives = 222/509 (43%), Gaps = 75/509 (14%) Query: 77 MDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFF--MNIFIASMVALLVMDNA 134 +D LSA M L+I+ + + +YS++YM G + FF MN F+ M+ L++ D+ Sbjct: 79 LDQLSALMALIITGVGFLIHVYSISYM----GHDPKFVRFFAFMNFFVGMMLILVLADSY 134 Query: 135 FWFIVLFEMMSLSSWFLV-------------------IARQDKTSINAGMLYFFIAHAGS 175 V +E + +S+ L+ R+ + NA F + G Sbjct: 135 PLMFVGWEGVGTASYLLIGFWFSGRNSEAPDRKLREASDREGVANSNAARKAFIMNRIGD 194 Query: 176 VLIMIAFLLMGRESGSLDFASFRTLSLSPGLASAVFLLA--FFGFGA--KAGMMPLHSWL 231 + M+ L+ + G+L +A A LA F GA K+G +PL +WL Sbjct: 195 LGFMLGMFLLYKLYGTLVIPELAGRVAGAQVAQAGIELACLFLLVGAVGKSGQLPLTTWL 254 Query: 232 PRAHPAAPSHASALM-SGVMVKIGIFGILKVAM--DLLAQTGLPLWWGILVMAIGAISAL 288 P A A P+ SAL+ + MV G++ I + DL + W +GA++AL Sbjct: 255 PDAM-AGPTPVSALIHAATMVTAGVYLIARSHFLYDLAPTASTWVAW------VGALTAL 307 Query: 289 LGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNH 348 G L AL + DIK++LA+STV +G + LAVG LH +FHLL H Sbjct: 308 YGALSALNQHDIKKILAYSTVSQLGYMFLAVG-------LH-------AYSAGVFHLLTH 353 Query: 349 ALFKGLLFLGAGAIISRLH-THDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISE 407 A FK LLFL AGA+I LH D+ MG L MP+T A L+G LAI+ IP Sbjct: 354 AFFKALLFLSAGAVIHALHEEQDVRAMGGLRTFMPFTHLAALMGVLAIAGIP-------- 405 Query: 408 WYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEA 467 W FS + A A A PI V+ L + Y + + G R H Sbjct: 406 --IWSGFFSKDAILATAFT-ADPILYVVGLGVALLTAFYMGRWYFLVWQGDYRG-HVAHP 461 Query: 468 QEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHT 527 E M V + +LAAL P + HAF ++A + L P Sbjct: 462 HEADGLMQVPLGILAALATFGGFLN---IPSFLGGNHAFDT----SLARALPLHP--HEL 512 Query: 528 QVTPSLLLLLLLAMPLLPGLYWLWCRSRR 556 V+ LL LL + L GL W W RR Sbjct: 513 PVSTEWLLTLLAVVAGLGGLLWAWTEHRR 541 >UniRef50_Q2RTW1 NADH dehydrogenase (Quinone) n=3 Tax=Proteobacteria RepID=Q2RTW1_RHORT Length = 490 Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 119/398 (29%), Positives = 188/398 (47%), Gaps = 34/398 (8%) Query: 93 VVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLV 152 + LYS+ Y+R + + IA + + + N F + +E ++LS++ L+ Sbjct: 94 IPAGLYSIAYLRANHEAHQPRFHAYFALAIACTLGIALAGNLFTLFLFYEALTLSTYPLI 153 Query: 153 IARQDKTSINAGMLYFFIAHAGSV-LIMIAFLLMGRESGSLDFASFRTLSLSPGLASAVF 211 + ++ AG +Y + S+ L+++A +L +G +DF L+ Sbjct: 154 THQGTAQAVRAGRIYMGMLLVPSIGLLLVAIILTHSLAGRMDFQPGGILAGRIDGPLVGL 213 Query: 212 LLAFFGFG-AKAGMMPLHSWLPRAHPAAPSHASALMSGV-MVKIGIFGILKV-----AMD 264 LLA F FG AKA +MP H WLP A AP+ SAL+ V +VK G+F I KV +D Sbjct: 214 LLALFVFGTAKAALMPFHRWLPAAM-VAPTPVSALLHAVAVVKAGVFTIAKVVISIFGID 272 Query: 265 LLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMV 324 LLA + W G L G IS +L L AL + ++KR LA+ST+ + +++A Sbjct: 273 LLAASS---WTGWLTWVAG-ISVILASLIALRQDNLKRRLAYSTISQLAYVVMA------ 322 Query: 325 GLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWT 384 LSL PL G+L A H++ HA K LF AGAI + H + + + + MPWT Sbjct: 323 -LSLFSPL----GVLAAGLHIVVHAFGKITLFFAAGAIHTATHKDSVSQFAGIGRAMPWT 377 Query: 385 AAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAV 444 A + L++ +PP GF+S+W + + F VA+ +A + L Sbjct: 378 MGAFAVASLSMIGLPPTAGFLSKWGIFSAAFQGQTWGVVAVLIASTV----------LNA 427 Query: 445 MCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLA 482 F+ + F P + E P M+ A+ L A Sbjct: 428 AYFLPILHTAFLKPPPGEAGAKIAEAPPLMVAALCLTA 465 >UniRef50_Q49W91 Na(+)/H(+) antiporter subunit A1 n=19 Tax=Bacillales RepID=MNHA1_STAS1 Length = 805 Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 138/543 (25%), Positives = 252/543 (46%), Gaps = 33/543 (6%) Query: 45 IGIISGITQLHAGVTLV--ARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTY 102 I +S I+ +G T++ A + P F + L +D L L+I+ + + LYS++Y Sbjct: 43 IYFLSYISTTMSGNTIMEKANWMPHFG-MNFNLYVDGLGLLFSLLITGIGCLIVLYSISY 101 Query: 103 MREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSIN 162 + E G ++ +F+ +M+ L++ DN + +E+ S SS+ L+ +DK + Sbjct: 102 LSRQEQLGHFYC--YLLLFMGAMLGLVLSDNLIILYLFWELTSFSSFLLISFWRDKQASI 159 Query: 163 AG-----MLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFG 217 G ++ F + I++ + G S + + SP ++ +L G Sbjct: 160 YGAQKSMLVTVFGGLSLLGGIILLSIAGGTTSIQELINNASEIQTSPFFIFSM-ILVLIG 218 Query: 218 FGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGI 277 K+ P + WLP A A ++ L S MVK G++ + ++ G W Sbjct: 219 AMTKSAQFPFYVWLPDAMEAPTPVSAYLHSATMVKAGLYLVARMTPIFAVSQG----WIW 274 Query: 278 LVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLH--DPLLTV 335 V A+G I+ L A +QD+K +LA+STV +G+I+ +GV V + + + Sbjct: 275 TVTAVGLITLFWASLNATKQQDLKGILAFSTVSQLGMIMAMLGVGAVSFHFEGAESQIYI 334 Query: 336 VGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAI 395 A+FHL+NHA FKG LF+ GA+ T D++K+G L MP + LI L++ Sbjct: 335 AAFTAAIFHLINHATFKGALFMITGAVDHSTGTRDVKKLGGLLTIMPISFTITLITSLSM 394 Query: 396 SAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCF-VKMYGIT 454 + IPP NGF+S+ +S+ ++ V +L G I + + A+ G + + ++ G Sbjct: 395 AGIPPFNGFLSKEKFLESMIEVTNVNLFSLDTLG-ILIPITAIIGSVFTFVYSIRFIGQI 453 Query: 455 FCGAPRSTH-AEEAQEVPNTMIVAMLLLAALCVLIA-----LSASWLAPKIMHIAHAFTN 508 F G+ + ++A EV M+++ +LA L ++ LS S + P + I + Sbjct: 454 FLGSYKEDKLPKKAHEVSPLMLISPSILAILVIVFGLFPAILSGSIIEPAVNAIGQTTNS 513 Query: 509 TPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWAC 568 T + G P F T + ++L++ YW++ ++ + T + W Sbjct: 514 TAEFHMFHG--FTPAFFSTLGIYIVGIVLIITFS-----YWIYLLQKQPT-KLTINYWYN 565 Query: 569 GYG 571 +G Sbjct: 566 KFG 568 >UniRef50_B3DZT2 NADH dehydrogenase subunit L n=2 Tax=Verrucomicrobia RepID=B3DZT2_METI4 Length = 601 Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 132/434 (30%), Positives = 218/434 (50%), Gaps = 64/434 (14%) Query: 72 DLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFF--MNIFIASMVALL 129 L + D LS M+LV+S + ++ +YS+ YM E G+ FF +++F+ SM+ ++ Sbjct: 72 QLGMVFDPLSKVMLLVVSGVGLMIHIYSMGYMAEDPGRSR----FFAELSLFMLSMLGIV 127 Query: 130 VMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHA-GSVLIMIAFLLMGRE 188 V N + +E++ +SS+ L+ +K S A F+A+ G ++ +L Sbjct: 128 VATNFIMMYIFWELVGVSSYLLIGFWFEKPSAAAAATKAFLANRIGDFGFLLGIILFWTL 187 Query: 189 SGSLDF-ASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALM- 246 +GSL F S + + L + + LL F G K+ +PLH WLP A P+ SAL+ Sbjct: 188 TGSLMFDPSVASYLKNHPLVTIMGLLLFCGCVGKSAQIPLHVWLPDAM-EGPTPVSALIH 246 Query: 247 SGVMVKIGIFGILKV---------AMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAE 297 + MV G++ + ++ A+D++A TG AI+A + L A + Sbjct: 247 AATMVAAGVYMLCRIFFVLEQSPQALDVIAWTG-------------AITAAVAALTATQQ 293 Query: 298 QDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFL 357 DIKR+LA+ST+ +G +++AVG + + A+FHL HA FK LLFL Sbjct: 294 DDIKRILAYSTMSQLGYMVMAVGSSAT--------------VAAMFHLCTHAFFKALLFL 339 Query: 358 GAGAIISRL-HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFS 416 GAG+++ L H D+ KMG L K+MP T LIG A++ IP +GF S Sbjct: 340 GAGSVLHVLHHEQDIWKMGGLWKKMPLTFLTFLIGSCALAGIPGFSGFFS---------- 389 Query: 417 LSRVEAVALQLAGPIAMVMLAV---TGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNT 473 + +++ G V+ + T GL +++ +TF G P++ A A+E P Sbjct: 390 ----KDTIIEMVGEKNRVLFWLALFTAGLTAFYMTRLFVVTFFGPPKTEVAAHAKESPLV 445 Query: 474 MIVAMLLLAALCVL 487 M++ ML+L+ V+ Sbjct: 446 MVLPMLVLSFFAVV 459 >UniRef50_C7RA71 NADH dehydrogenase (Quinone) n=4 Tax=Proteobacteria RepID=C7RA71_KANKD Length = 506 Score = 139 bits (349), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 113/349 (32%), Positives = 171/349 (48%), Gaps = 30/349 (8%) Query: 72 DLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIF---IASMVAL 128 D+ R + L +V L +V S+Y++ YMR G G F F I++++ L Sbjct: 72 DIAFRAEPLGVLFSMVAGSLWLVTSIYAIGYMR---GHGEVNQTRFYACFAVAISAVMGL 128 Query: 129 LVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSV-LIMIAFLLMGR 187 DN F + +E+++LS++ LV + + G Y I A S+ +++A + Sbjct: 129 AFADNLFTLFIFYEVLTLSTYPLVTHAGTEKAKQGGRTYLSILLATSIGFLLLAIVGTWW 188 Query: 188 ESGSLDFASFRTLSLSPGLASAVFLLAFFGFG-AKAGMMPLHSWLPRAHPAAPSHASALM 246 ++G+L F S +A LL F FG KA +MP H WLP A AP+ SAL+ Sbjct: 189 QAGTLTFTQGGVFDDSTSKVAASVLLVLFIFGIGKAAIMPFHRWLPAAM-VAPTPVSALL 247 Query: 247 SGV-MVKIGIFGILKV-----AMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDI 300 V +VK G+F +LKV +DLL W ++ + A S LL L A+ + ++ Sbjct: 248 HAVAVVKAGVFTVLKVCVYIFGIDLLRDIPATQW----LLYLAAASVLLASLVAMRQDNL 303 Query: 301 KRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAG 360 K+ LA+STV +G I + +A + G+LG H++ HA K LF AG Sbjct: 304 KKRLAYSTVSQLGYITIGALLA-----------SQAGILGGALHIVAHAFGKITLFFCAG 352 Query: 361 AIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWY 409 AI+ H ++ M L K MP T A IG L+I +PP G S+WY Sbjct: 353 AIMVAAHKTEISDMRGLGKAMPITMIAFFIGSLSIIGLPPAGGVWSKWY 401 >UniRef50_C8SB86 NADH dehydrogenase (Quinone) n=1 Tax=Ferroglobus placidus DSM 10642 RepID=C8SB86_FERPL Length = 562 Score = 139 bits (349), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 115/422 (27%), Positives = 199/422 (47%), Gaps = 53/422 (12%) Query: 69 EFADLTL--RMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMV 126 EF D + R+D LS V S+ + ++Y+L R +E A +++ S + Sbjct: 58 EFLDYEVFVRVDKLSLVFAYVFSIAAIAMNVYALHSSR-FEHFSAM-------VYVGSAL 109 Query: 127 ALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMG 186 ++ + F F + +E+M++ S FL+ R+ K + AG Y G + ++ +L Sbjct: 110 GVVFAGDLFSFYIFWELMAVGSLFLIWMRRTKKAEEAGFRYALWHLVGGLFLLAGIVLYV 169 Query: 187 RESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALM 246 +++G+L F SF + L+ + L GF A + PLH+WLP A+P A + + Sbjct: 170 QQTGNLKFVSFEKVGLA-------YYLILIGFIVNAAVPPLHAWLPDAYPEATVTGAVYL 222 Query: 247 SGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAW 306 + K ++ + + A L +W +GA+ A+ GV++A+ E D +RLLA+ Sbjct: 223 TAFTTKSAVYALARG----FAGEELLMW-------LGAVMAMYGVIFAVLENDGRRLLAY 271 Query: 307 STVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRL 366 V VG ++ VG+ T + + GA H H L+K LLF+G GA+I Sbjct: 272 HIVSQVGYMVAGVGIG-----------TAMAINGACSHAFTHILYKALLFMGVGAVIEVT 320 Query: 367 HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQ 426 ++G L + MP T ++G +ISA P +GF+S+ T V A A + Sbjct: 321 GRSKFTELGGLYRYMPITFYLYMVGAFSISAFPLFSGFVSKNMT---------VYASAEE 371 Query: 427 LAGPIAMVMLAVTGGLAVMCFVKM-YGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALC 485 + ++ + G + +K+ + + F P EA+E P M+ M++LAAL Sbjct: 372 NLVLVWFLLEGASVGTFLHTGLKLPWNVWFSREP----VIEAREPPKNMLAGMIILAALN 427 Query: 486 VL 487 V Sbjct: 428 VF 429 >UniRef50_A6Q8K0 NADH-quinone oxidoreductase, chain L n=2 Tax=Epsilonproteobacteria RepID=A6Q8K0_SULNB Length = 616 Score = 139 bits (349), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 123/418 (29%), Positives = 202/418 (48%), Gaps = 45/418 (10%) Query: 68 FEFADLTL----RMDSLSAFMVLVISLLVVVCSLYSLTYMRE--YEGKGAAAMGFFMNIF 121 FEF L++ +D LS M+L+ + L + ++ YM E ++ + A + FF Sbjct: 63 FEFGSLSIPFGIYIDKLSLVMLLIATGLGFLDVHFAHDYMAEDPHQPRYYAKVLFF---- 118 Query: 122 IASMVALLVMDNAFWFIVLFEMMSLSSWFLV-IARQDKTSINAGMLYFFIAHAGSVLIMI 180 I M+ L+ + V +E M L+S+ L+ Q + +AG+ F G + + Sbjct: 119 IGGMILLVSAKDLVALFVGWEFMGLASYLLISFWHQKRDPADAGVSAFLFTRFGDIFLFA 178 Query: 181 AFLLMGRESGSLDFASFRTLSLSPGLASAVFLLA----FFGFGAKAGMMPLHSWLPRAHP 236 A ++ +GS+D ++ S L + LA F K+G PL WL RA Sbjct: 179 AIGILYYYAGSIDMVHLNEMAKSGTLNKDMMFLASVFIFIAAIGKSGQFPLFPWLMRAME 238 Query: 237 AAPSHASALMSG-VMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYAL 295 P+ SAL+ G MV GI+ + ++ + L I+V +IGA+SA +G AL Sbjct: 239 G-PTTVSALIHGATMVNSGIYIVARLFDFYMVAEAL-----IVVASIGALSAFIGATSAL 292 Query: 296 AEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLL 355 + ++K++LA+ST+ ++ I + +G L + HL+NHA+FK LL Sbjct: 293 VQSELKKVLAYSTMSHLSIAFVGLGAG--------------SLAAGMTHLVNHAVFKALL 338 Query: 356 FLGAGAII-SRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSL 414 FLGAGA+I S H DM ++G L K++ WTA + L++S IPP +GF S+ Sbjct: 339 FLGAGAVIMSAGHVKDMWRLGGLGKKLTWTALFMGMAVLSLSGIPPFSGFFSK------- 391 Query: 415 FSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPN 472 V A+A VM+ + G L++ +++ +TF G PR E + P+ Sbjct: 392 -DAVIVSAIANPGTHGWVSVMVTIAGVLSIAYIGRLWLLTFAGKPRDKALFEKVKAPS 448 >UniRef50_B2V982 Proton-translocating NADH-quinone oxidoreductase, chain L n=5 Tax=Aquificales RepID=B2V982_SULSY Length = 648 Score = 139 bits (349), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 132/484 (27%), Positives = 226/484 (46%), Gaps = 51/484 (10%) Query: 24 LLGLDRLAIKLSGITSLVGGVIGIISGITQL----HAGVTLVARFAPPFEFADLTLRM-- 77 L G L LSGI +++G I I+ + +G + D ++ + Sbjct: 20 LFGYKLLKEPLSGIVAVIGVAISAIASVKGFIDVAESGKYYDLKLFNWLTIGDYSISVSI 79 Query: 78 --DSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGF-FMNIFIASMVALLVMDNA 134 D LSA M V++ + +++ YM+ G + F ++++F+ M+ L + DN Sbjct: 80 FWDPLSALMTCVVTCVSTFIFIFATGYMK---GDESYPRFFAYLSLFVFMMLMLTLSDNL 136 Query: 135 FWFIVLFEMMSLSSWFLV-IARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLD 193 +E + L+S+ L+ K++ NA M F + G L ++ LL G+LD Sbjct: 137 VQLFFGWEGVGLASYLLIGFWHYKKSAANAAMEAFVVNRVGDWLFLLGILLAFTTFGTLD 196 Query: 194 FAS-FRTL-SLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALM-SGVM 250 + F L + + + + LL F G K+ +PLH WLP A P+ SAL+ + M Sbjct: 197 YLQIFNKLHGMDYIIVTFIALLLFGGAVGKSAQIPLHIWLPNAM-EGPTPVSALIHAATM 255 Query: 251 VKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVE 310 V G++ + ++ M + A + + L V+ IG +SA L L + DIKR++A+ST+ Sbjct: 256 VAAGVYMVARL-MPVFASSEIAL---DTVLFIGTMSAFLAATMGLVQNDIKRIIAYSTLS 311 Query: 311 NVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTH- 369 +G + A G+ + +FHL +HA+FK LLFLG+G+++ LH H Sbjct: 312 QLGYMFAAEGLGLFS--------------EGMFHLTSHAVFKALLFLGSGSVLIALH-HL 356 Query: 370 -DMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLA 428 D++KMG + + MP T LIG LA++ IPP GF S+ + + ++ Sbjct: 357 LDVQKMGQIGRLMPITMGTFLIGSLALAGIPPFVGFFSKDPIIEGAYEINT--------- 407 Query: 429 GPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTH--AEEAQEVPNTMIVAMLLLAALCV 486 A L + L +++ +TF R H E E P M + +++LA V Sbjct: 408 --FAFTFLWLGAFLTAFYIFRLFFLTFFDGDRLDHHIREHVHESPPNMTIPLIVLATATV 465 Query: 487 LIAL 490 ++ Sbjct: 466 ILGF 469 >UniRef50_B3QY40 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QY40_CHLT3 Length = 772 Score = 139 bits (349), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 104/342 (30%), Positives = 179/342 (52%), Gaps = 36/342 (10%) Query: 77 MDSLSAFMVLVISLLVVVCSLYSLTYM--REYEGKGAAAMGFFMNIFIASMVALLVMDNA 134 +D+L+A M++V++L+ + ++S+ YM +Y G+ A +G IF SM+ +++ DN Sbjct: 93 IDNLTAIMLVVVTLISFLVHIFSMGYMAGDKYYGRYYAYLG----IFTFSMLGIVLSDNL 148 Query: 135 FWFIVLFEMMSLSSWFLV-IARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLD 193 F + +E++ LSS+ L+ + ++ +A F G + + + L++ + + Sbjct: 149 FSIYIFWELVGLSSYLLIGFFFEKDSAADAQKKAFLTNRVGDIGMWLGILILYSQFHTFG 208 Query: 194 FASFR------TLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALM- 246 + +LS +A LL F G K+ PLH WLP A P+ SAL+ Sbjct: 209 YEEIYQNIQDGNFTLSEAWLTAGGLLLFMGCVGKSAQFPLHIWLPDAMEG-PTPVSALIH 267 Query: 247 SGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAW 306 + MV G++ + ++ +L+ L + + IGA +A + A+ + DIKR+LA+ Sbjct: 268 AATMVAAGVYFVARI-FPILSVDALHV-----IAFIGAFTAFMAATIAITQHDIKRVLAY 321 Query: 307 STVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAII-SR 365 ST+ +G +++ +G+ + P A FHL+ HA FK LFLG+GA+I + Sbjct: 322 STLSQLGYMVMGMGIGA-----YAP---------AFFHLVTHAFFKACLFLGSGAVIHAT 367 Query: 366 LHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISE 407 H DM MG L K MPWT A I LA+S +P +GF+S+ Sbjct: 368 HHEQDMRWMGGLRKNMPWTFATFTIAMLALSGLPMTSGFMSK 409 >UniRef50_A0AL63 Complete genome n=20 Tax=Bacillales RepID=A0AL63_LISW6 Length = 802 Score = 138 bits (348), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 137/525 (26%), Positives = 249/525 (47%), Gaps = 51/525 (9%) Query: 72 DLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVM 131 + T+ +D LS L+I+ + + + YS+ Y+ + + + + F+ +F+ +M+ +++ Sbjct: 70 NFTVVVDGLSLLFALLITGIGSLVTFYSIYYLGKKKER-LSNFYTFLFMFMTAMLGVVLS 128 Query: 132 DNAFWFIVLFEMMSLSSWFLV----IARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGR 187 DN + +E+ S+SS+ L+ + + M+ I G ++++ F+L+ Sbjct: 129 DNLIVLYLFWELTSISSFLLIGYWYHRERSRYGARKSMM---ITVFGGLMMLGGFILLHI 185 Query: 188 ESGSLDFASFRTLSLSPGLAS------AVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSH 241 S S S R + + + S +L G K+ +P H WLP A A Sbjct: 186 MSDSF---SIRAIIQNADIISHNSLFIPAMILVLLGAFTKSAQVPFHIWLPDAMEAPTPV 242 Query: 242 ASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIK 301 ++ L S MVK GI+ + + L A +G+ W V +G + G L A + D+K Sbjct: 243 SAYLHSATMVKAGIYIVARFT-PLFASSGVWFW---TVSLVGITTLFWGSLNATKKNDLK 298 Query: 302 RLLAWSTVENVGII--LLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGA 359 +LA+ST+ +G+I LL VG A + + V+ ++ A+FHL NHA FKG LF+ Sbjct: 299 AILAYSTISQLGMIMALLGVGAASLHFDTLSDDIYVMAIVAAVFHLFNHATFKGSLFMMV 358 Query: 360 GAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSR 419 G + T D+ ++G L + MP TA IG A++ IPP NGF+S+ ++S+ +++ Sbjct: 359 GIVDHETGTRDIRRLGGLMRIMPITATIAFIGTFAMAGIPPFNGFLSKEMFFESMINITH 418 Query: 420 VEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRS-THAEEAQEVPNTMIVAM 478 ++ G + V+ V + + ++ TF G + ++ E P +++ Sbjct: 419 LQLFDASTWGILLPVVAWVASVFTFVYSMIIFFKTFTGKVKPFLLPKKPHEAPFGLLLPP 478 Query: 479 LLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPG-----TFHTQV---- 529 ++L+ VLI L + +A I+ PA A+VPG + H + Sbjct: 479 IILSIFVVLIGLFPNLIAKPILE---------PAVR----AIVPGLATDFSIHISLWHGF 525 Query: 530 TPSLLLLL-LLAMPLLPGL---YWL-WCRSRRAAFRRTGDAWACG 569 TP+LL+ ++A+ +L L YW W +R R G + G Sbjct: 526 TPALLMTFGVVAVGILLFLTHKYWKPWITTRVPKALRIGKTYDNG 570 >UniRef50_Q9RGZ5 Na(+)/H(+) antiporter subunit A n=9 Tax=Firmicutes RepID=MRPA_BACPF Length = 805 Score = 138 bits (347), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 128/466 (27%), Positives = 227/466 (48%), Gaps = 39/466 (8%) Query: 72 DLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNI--FIASMVALL 129 + T+ +D LS L+I+ + + LYS+ Y+ + K + F++ + F+ +M+ ++ Sbjct: 71 NFTVFVDGLSLLFALLITGIGTLVILYSIFYLSK---KTESLNNFYVYLLMFMGAMLGVV 127 Query: 130 VMDNAFWFIVLFEMMSLSS------WFLVIARQDKTSINA--GMLYFFIAHAGSVLIMIA 181 + DN V +E+ SL+S WF ++K++ A ML I G ++ Sbjct: 128 LSDNLIVLYVFWELTSLASSLLISYWF----HREKSTYGAQKSML---ITVFGGFAMLGG 180 Query: 182 FLLMGRESGSLDFASFRTLSLSPGL--ASAVFL----LAFFGFGAKAGMMPLHSWLPRAH 235 F L+ +G+ S R + + L +S +FL L G K+ P H WLP A Sbjct: 181 FSLLYVMTGTF---SIRGIIENVDLVTSSELFLPAMILVLLGAFTKSAQFPFHIWLPDAM 237 Query: 236 PAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYAL 295 A ++ L S MVK GI+ + ++ + A + W L+ G ++ L G A+ Sbjct: 238 EAPTPVSAYLHSATMVKAGIYLVARLT-PVFAGSAEWFW---LLTGFGVVTLLWGSTSAV 293 Query: 296 AEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLH---DPLLTVVGLLGALFHLLNHALFK 352 ++D+K +LA+STV +G+I+ +G+ + DP ++ A+FHL+NHA FK Sbjct: 294 RQKDLKGILAFSTVSQLGLIMTLLGLGSAAIYFGESVDPAFYSFAIMAAIFHLINHATFK 353 Query: 353 GLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQ 412 G LF+ AG I T D+ K+G L MP T LIG +++ +PP NGF+S+ + Sbjct: 354 GSLFMTAGIIDHETGTRDIRKLGGLMAIMPVTFTVSLIGLASMAGLPPFNGFLSKEMFFT 413 Query: 413 SLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAE-EAQEVP 471 +L + + A ++ G I +V+ + + + M+ TF G + + + + E P Sbjct: 414 ALLRATEMNAFNMETFGIIIVVLAWIASVFTFLYCLIMFFKTFTGKFKPENYDVKVHEAP 473 Query: 472 NTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASG 517 M+++ ++L +L ++ + LA I I A P +A G Sbjct: 474 IGMLISPVILGSLVIVFGFFPNILAYTI--IEPAMQAVLPTVLADG 517 >UniRef50_Q649J3 NADH dehydrogenase/oxidoreductase n=4 Tax=Archaea RepID=Q649J3_9ARCH Length = 513 Score = 138 bits (347), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 117/428 (27%), Positives = 215/428 (50%), Gaps = 32/428 (7%) Query: 77 MDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIF---IASMVALLVMDN 133 +D+L+AF+++V+ + +C +YS R E + + F +F + + + V + Sbjct: 78 IDTLNAFVLVVVLFMSFMCVIYS---KRSIEKEQPHKIVLFYVVFQLLVTGLCGITVTGD 134 Query: 134 AFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLD 193 F V E+ S + + +IA ++ A Y + G+ +++ + +G+L+ Sbjct: 135 IFNLYVFLEI-SALAAYALIALAGGRALKASYNYVIMGSLGACFVLLGIGFLYAVTGTLN 193 Query: 194 FASFRTLSLSPGLAS----AVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGV 249 A L L P + A F+ G K + PLH W P A+ APS S +++ Sbjct: 194 IADLSRL-LPPLYGNRAVQAAFVFFAVGLSIKVALFPLHVWQPDAYTYAPSVVSVIIATA 252 Query: 250 MVKIGIFGILKVAMDLLAQTGLPLWWGILVMA--IGAISALLGVLYALAEQDIKRLLAWS 307 M K+ ++ +++V + + + GI V I A+ + G + A+ + ++KR+LA+S Sbjct: 253 MAKVSVYALIRVIFSVFTVKFIDTYVGIDVALCWIAAMGIIAGSVLAIMQTNLKRMLAYS 312 Query: 308 TVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLH 367 +V +G I+L +G+A P+ + GL+GA+ H+LNHA+ KG LF+ AGA I +L Sbjct: 313 SVAQIGYIVLGIGLA--------PM-SAWGLVGAVAHILNHAIMKGCLFMAAGAFIYKLG 363 Query: 368 THDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQL 427 D+ L K+MP+ + A I +++ +PP GF S+ + L SL E L + Sbjct: 364 LRDIRDFEGLGKKMPYASVAFTIAAISMIGVPPCTGFASKLFL--ILASLQATE--TLPV 419 Query: 428 AGPIAMVMLAVTGGLAVMCFVKMYG-ITFCGA----PRSTHAEEAQEVPNTMIVAMLLLA 482 +G I + +L + L + F ++ I F + + +VP +M+V ML+LA Sbjct: 420 SGYIFVAVLLTSTLLNLAYFWRVIDRIYFVKSEEGHEGGGQETKKADVPFSMVVPMLILA 479 Query: 483 ALCVLIAL 490 ALC+++ + Sbjct: 480 ALCIVLGI 487 >UniRef50_Q2IN04 Proton-translocating NADH-quinone oxidoreductase, chain M n=6 Tax=Bacteria RepID=Q2IN04_ANADE Length = 542 Score = 138 bits (347), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 102/314 (32%), Positives = 169/314 (53%), Gaps = 29/314 (9%) Query: 125 MVALLVMDNAFW----------FIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAG 174 M+ALLV+++A F V +E M + + L+ + + A + +F A Sbjct: 114 MIALLVLESAMLGTFIALDLVLFYVFWEAMLIPMYLLIGIWGSQNRLYATVKFFVYTFAA 173 Query: 175 SVLIMIAFLLMG-RESGSLDF-ASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLP 232 SVL+++A L + + G+ D+ + R L+++PG AS +FL F K M PLH+WLP Sbjct: 174 SVLMLLAILYVYFHDGGTFDYVEARRALAVTPGAASWLFLAFALAFAVKVPMFPLHTWLP 233 Query: 233 RAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVL 292 AH AP+ S +++GV++K+G FG + A+ L + L + V+A+ I + G L Sbjct: 234 DAHTEAPTAGSVILAGVLLKMGTFGFFRYALPLFPEAALQHRNLVAVLAV--IGIIYGAL 291 Query: 293 YALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFK 352 +L + D+KRL+A+S+V ++G ++L + L+ G+ G+++ +LNH + Sbjct: 292 MSLVQTDMKRLVAYSSVSHLGFVMLGLMA-----------LSAEGMTGSVYQMLNHGVST 340 Query: 353 GLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWY--- 409 G LFL G + R HT + + G +AKR+P AAA +I L+ +P NGF+ E+ Sbjct: 341 GALFLLVGMLYERRHTRLISEYGGIAKRVPVIAAAFVIVTLSSIGLPGTNGFVGEFLILS 400 Query: 410 -TWQSLFSLSRVEA 422 TW S S V A Sbjct: 401 GTWLSRLGGSAVFA 414 >UniRef50_Q1NS05 NADH dehydrogenase (Quinone) n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NS05_9DELT Length = 507 Score = 138 bits (347), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 109/354 (30%), Positives = 180/354 (50%), Gaps = 33/354 (9%) Query: 130 VMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRES 189 V + F V E++SLS++ LV + A Y + S+LI++A ++ + Sbjct: 143 VTADLFNLFVFLEVVSLSAYALVAVGGRPVAELAAFRYLLMGAISSLLILLAVGVLFALT 202 Query: 190 GSLDFASF--RTLSL-SPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALM 246 GSL+ A R L +P + GF KA + PLH+WLP AH +AP SA++ Sbjct: 203 GSLNLADVAQRLPELETPAALTLAAAALLVGFMLKAALFPLHNWLPEAHASAPGTVSAVL 262 Query: 247 SGVMVKIGIFGILKV-----AMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIK 301 SG++VK GI G+++ ++LL L G +++ + A S ++G +A+ + D+K Sbjct: 263 SGLVVKAGIIGLVRTYQLFAGVELLDTATL----GAILLWLAAASVVMGSFFAVFQHDLK 318 Query: 302 RLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGA 361 +LA+ST+ N+G I++ G +L P +LGA HL NHAL K LFL AGA Sbjct: 319 LMLAYSTITNIGYIVM-------GWALASP----QAMLGASLHLFNHALIKVTLFLAAGA 367 Query: 362 IISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVE 421 +I +E++ + + MP++ AA + LAI +PP GF+ +WY + Sbjct: 368 LIYGTGLRTLEELRGIGRTMPFSCAALALAALAIVGVPPTAGFVGKWY----------IA 417 Query: 422 AVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMI 475 ALQ P +++ + LA + +V++ + P A+EVP +M+ Sbjct: 418 LGALQADRPFFALVVILGALLAAVYYVRIINALYFREPEQQAVVTAREVPWSML 471 >UniRef50_C6D5D4 Proton-translocating NADH-quinone oxidoreductase, chain L n=82 Tax=Bacillales RepID=C6D5D4_PAESJ Length = 625 Score = 138 bits (347), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 148/509 (29%), Positives = 243/509 (47%), Gaps = 60/509 (11%) Query: 1 MDALQLLTWSLILYLFASLASLFLLGLD-RLAIKLSG-ITSLVGGVIGIISGITQLHAGV 58 MD L W + L+ FAS L LG RLA L G I SL V+ ++ I +L G Sbjct: 1 MDQLTKAAWLIPLFPFASFLLLTALGRSYRLAGVLIGSIGSLASLVMSLLVFIERL--GP 58 Query: 59 TLVARFAPPFEF---ADLTLRM----DSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGA 111 V +++ + TL++ +L+A M+++++++ + ++YS YM++ E + Sbjct: 59 NAVDYSGDSYKWIGLGEYTLKIGFEITNLNALMLVIVTVVSFLVNVYSAGYMKKDE-RIT 117 Query: 112 AAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFI- 170 G+ + +F +M+ L++ DN F + +E++ + S+ LV K + A FI Sbjct: 118 VFYGY-VALFTFAMLGLVLSDNMLVFYMFWELVGVCSFLLVGFWYAKPAARAAAKKAFIV 176 Query: 171 ---AHAGSVL-IMIAFLLMGRESGSLDFASFRTLSLSPGLASAVF--------LLAFFGF 218 AG +L I++ F M +LDF+S + + G + + LL F G Sbjct: 177 TRIGDAGLLLGIIVLFWYM--PGHALDFSSIHNV-FTEGQSGTITMTITTSIALLLFMGV 233 Query: 219 GAKAGMMPLHSWLPRAHPAAPSHASALM-SGVMVKIGIFGILKVAMDLLAQTGLPLWWGI 277 K+G PLH WLP A P+ SAL+ + MV G+F +L D+ + + Sbjct: 234 IGKSGQFPLHVWLPDAMEG-PTPISALIHAATMVAAGVF-LLARTFDIFEASASAMH--- 288 Query: 278 LVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVG 337 V G +A+ ALA+ DIKR+LA+ST+ +G +++A+G+ Sbjct: 289 TVAYFGGFTAIFAATVALAQNDIKRILAYSTISQLGYMVMAMGLG--------------S 334 Query: 338 LLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISA 397 + G +FHL HA FK LLFL AG++I +HT ++ +MG L +M TA IG L++S Sbjct: 335 MTGGVFHLFTHAFFKALLFLAAGSVIHAVHTQNIHEMGGLGSKMRITAWTFAIGALSLSG 394 Query: 398 IPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCG 457 IPP +GF S+ + A AL P + + +++ I F G Sbjct: 395 IPPFSGFWSK----------DAILASALD-ENPFLFAVGLAAAFCTALYMSRLFFIVFMG 443 Query: 458 APRSTHAEEAQEVPNTMIVAMLLLAALCV 486 R E +E M + +L+LA + V Sbjct: 444 KSRLQQPAEVKESSKVMTIPLLVLAVISV 472 >UniRef50_B3QY39 Proton-translocating NADH-quinone oxidoreductase, chain M n=14 Tax=Bacteroidetes/Chlorobi group RepID=B3QY39_CHLT3 Length = 545 Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 122/420 (29%), Positives = 198/420 (47%), Gaps = 54/420 (12%) Query: 75 LRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFM--NIFIASMVALLVMD 132 L +D LS MVL+ +L+ ++ + S T ++ +G +F+ N+ +M+ V Sbjct: 93 LGVDGLSITMVLLTALISIIGVVSSWTIQKQVKG-------YFLLYNLLSMAMMGCFVAL 145 Query: 133 NAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSV-----LIMIAFLLMGR 187 + F F V +E+M L +FL+ A + +F GSV LI + F ++ Sbjct: 146 DFFLFYVFWEIMLLPMYFLIGIWGGPNREYAAIKFFLYTLFGSVFMLLVLIGLYFSVIDP 205 Query: 188 ESGSLDF---ASFRTLSLSPG---------LASAVFLLAFFGFGAKAGMMPLHSWLPRAH 235 +G+ F A + PG A F+ F GF K M P H+WLP AH Sbjct: 206 ATGNHTFSMVAMVDQANYIPGSIFGPESTFWRYAAFIALFVGFAIKVPMFPFHTWLPDAH 265 Query: 236 PAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYAL 295 AP+ S +++GV++K+G +G+L++ + L + I V GAI+ + G L AL Sbjct: 266 VEAPTPISVILAGVLLKLGTYGMLRINFPFFPEVFTDLAYVIGVF--GAINIIYGALCAL 323 Query: 296 AEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLL 355 A+ D+K+++A+S++ ++G +LL + + G+ GALF + NH +L Sbjct: 324 AQLDLKKMVAYSSISHMGYVLLGMAA-----------INTEGMSGALFQMFNHGTITAML 372 Query: 356 FLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLF 415 FL G I R H+ +EK G L+ MP + + A +P L+GFISE + + F Sbjct: 373 FLLVGVIYDRAHSRQIEKFGGLSSYMPVYSGILTMAFFASLGLPGLSGFISEAFIFVGSF 432 Query: 416 SLSRVEAVALQLAGPIAMV-MLAVTGGLAVM--CFVKMYGITFCGAPRSTHAEEAQEVPN 472 S ++ PIAMV +L + G A + +M F G R E E N Sbjct: 433 S--------SEVTRPIAMVSVLGIVFGAAYLLWSLQRM----FLGKRRPDALYELHEDEN 480 >UniRef50_Q895D9 Sodium/proton antiporter shaA n=1 Tax=Clostridium tetani RepID=Q895D9_CLOTE Length = 654 Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 107/337 (31%), Positives = 190/337 (56%), Gaps = 13/337 (3%) Query: 73 LTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMD 132 L+L++D + + +L+ + ++YS+ Y+ Y+ + + FFM + S + + + + Sbjct: 71 LSLKIDMFRYIFIWLTALIWFLVTIYSVQYLNSYKNRNRYYL-FFMLTY-WSTLGIFISE 128 Query: 133 NAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSL 192 N FE+MSL+S+ L+I +D+ S AG Y +A G +++++ L+ + +L Sbjct: 129 NFLNLFTFFEIMSLTSYPLIIHDEDEYSHEAGETYIIMAVTGGLVLLMGLFLLFDYTQTL 188 Query: 193 DFASFR-TLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMV 251 + + + +L+ + A+ L FGFG KAGM PLH WLP+AHPAAP+ ASA++SGV++ Sbjct: 189 EISLLKNSLANLGNIKYAIVFLIIFGFGIKAGMFPLHIWLPKAHPAAPAPASAVLSGVLL 248 Query: 252 KIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVEN 311 K GIFGI+ + + + ++++ +G ++ +G A+ +++IKR+LA+S++ Sbjct: 249 KTGIFGIMITSQIITPEDKKI---SLVILVLGFMTMFIGGFLAMFQRNIKRILAYSSMSQ 305 Query: 312 VGIILLAVGVAMVG-LSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHD 370 +G IL VG+ ++G L H V G +H++NH +FK LLF+ AG I LH Sbjct: 306 MGYIL--VGIGLMGILEEHK----YVAFYGTTYHIINHMIFKVLLFMIAGVIYMYLHELS 359 Query: 371 MEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISE 407 + +G + I I+A+P NGFIS+ Sbjct: 360 INHIGGFGRNKKLLKILFFIAICGITAMPGFNGFISK 396 >UniRef50_D2R5F8 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R5F8_9PLAN Length = 600 Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 114/386 (29%), Positives = 189/386 (48%), Gaps = 41/386 (10%) Query: 73 LTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIA-SMVALLVM 131 +L +D L +M + +LL+V L S ++E E A+ F M + + + + Sbjct: 81 FSLALDGLGLWMFGLSALLMVTAVLVSWEAIKERE-----ALFFGMLLLLEFGCLGVFTA 135 Query: 132 DNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLM------ 185 + F V FE + +FL+ + A +F AGS+L + L++ Sbjct: 136 RDLILFYVFFEFTLIPLFFLIGIWGSEDRKYAASKFFLYTLAGSLLTFLGLLVIVVWCYQ 195 Query: 186 GRESGSLDF------ASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAP 239 G L F A+ R L P AVF+ F GF K + PLH+WLP AH AP Sbjct: 196 QEGVGKLVFSIPELTATLRDAPLPPAWQLAVFIALFAGFAIKVPLFPLHTWLPLAHVQAP 255 Query: 240 SHASALMSGVMVKIGIFGILKVAMDLLAQ---TGLP--LWWGILVMAIGAISALLGVLYA 294 + S +++GV++KIG++G L+ ++ +L T +P LW + I + G L A Sbjct: 256 TAGSVILAGVLLKIGVYGFLRFSVPMLPDATVTCMPYLLW-------LSVIGIIYGALVA 308 Query: 295 LAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGL 354 LA+ D+KRL+A+S+V ++G L GL +PL G+ G++ ++NH L G Sbjct: 309 LAQGDMKRLIAYSSVSHLGYCTL-------GLFALNPL----GVQGSVLQMVNHGLSTGG 357 Query: 355 LFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSL 414 LF G + R HT +++++G LA++ PW + LI + +P LNGF E+ + Sbjct: 358 LFAVIGMLYERYHTREIKQLGGLARQTPWLSFFMLIFTFSSIGLPGLNGFPGEFMILLGM 417 Query: 415 FSLSRVEAVALQLAGPIAMVMLAVTG 440 F + ++ + + + +LAVTG Sbjct: 418 FQRAWAQSSVENFSQLMTIAVLAVTG 443 >UniRef50_Q1NS06 NADH dehydrogenase (Quinone) n=2 Tax=delta proteobacterium MLMS-1 RepID=Q1NS06_9DELT Length = 499 Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 112/349 (32%), Positives = 173/349 (49%), Gaps = 33/349 (9%) Query: 75 LRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNA 134 ++D + F LV S L + ++Y++ YMR E + F + + S V + + +N Sbjct: 75 FKVDLMGLFFALVSSTLWIFTTIYAIGYMRGKEDRSQVRFFGFFALCVTSTVGIALAENL 134 Query: 135 FWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDF 194 + +E++++ ++ LVI ++ ++ AG Y G L+++ +L+ +G+L F Sbjct: 135 LTLFIFYELLTVCTYPLVIHKETPAALQAGRKYLLYTLGGGGLVLLGLVLVQDAAGTLSF 194 Query: 195 -------ASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMS 247 A SL G +F GFG KA +MPLH WLP A AP+ SAL+ Sbjct: 195 GQAGLLAAGVDNGSLGVGQLGLIFAALVLGFGVKAAVMPLHGWLPSAM-VAPTPVSALLH 253 Query: 248 GV-MVKIGIFGILKVAMD-----LLAQTGLP--LWWGILVMAIGAISALLGVLYALAEQD 299 V +VK G FGIL+V D LLA+ G L W +V IG G L A + + Sbjct: 254 AVAVVKAGAFGILRVIYDIFGLELLAELGFTQALAWLAVVSIIG------GSLLAWRQVN 307 Query: 300 IKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGA 359 +KR LA+STV V ILLA SL +P TVV A+ HL N K +F A Sbjct: 308 LKRRLAYSTVSQVSYILLAA-------SLLNPTATVV----AIMHLANQGFAKITMFFVA 356 Query: 360 GAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEW 408 GAI ++ ++ + ++MPW AA + L+ +P L GF+++W Sbjct: 357 GAIEQGSGKTEIHQLDGIGRQMPWCLAAFTVSALSFIGVPLLAGFLTKW 405 >UniRef50_B3EIA1 Proton-translocating NADH-quinone oxidoreductase, chain L n=27 Tax=cellular organisms RepID=B3EIA1_CHLL2 Length = 770 Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 110/344 (31%), Positives = 177/344 (51%), Gaps = 40/344 (11%) Query: 77 MDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFF---MNIFIASMVALLVMDN 133 +D+L+A M+ +++L+ + LYS YM G G F + IF SM+ +++ DN Sbjct: 92 IDNLTAIMLAMVTLISFLVHLYSTGYM-----AGDPRYGRFFAYLGIFTFSMLGIVLSDN 146 Query: 134 AFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAH-AGSVLIMIAFLLMGRESGSL 192 F + +E++ LSS+ L+ +K S F+A+ G + + + L++ + + Sbjct: 147 LFAIYIFWELVGLSSYLLIGFYFEKDSAADAQKKAFLANRVGDIGMWLGILILYSQFHTF 206 Query: 193 DFAS-FRTLS-----LSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALM 246 + F L+ +S +A +L F G K+ PLH WLP A P+ SAL+ Sbjct: 207 SYQEIFANLAAGKFGMSQAWLTAAGILLFMGCVGKSAQFPLHVWLPDAMEG-PTPVSALI 265 Query: 247 -SGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMA-IGAISALLGVLYALAEQDIKRLL 304 + MV G++ + ++ + L A + V+A IGA +A + A+ + DIKR+L Sbjct: 266 HAATMVAAGVYFVARIFVLLTADA-------LHVIAFIGAFTAFMAATIAITQHDIKRVL 318 Query: 305 AWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIIS 364 A+STV +G ++L +GV ALFHL+ HA FK LFLG+GAII Sbjct: 319 AYSTVSQLGYMVLGLGVGAYS--------------AALFHLVTHAFFKACLFLGSGAIIH 364 Query: 365 RL-HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISE 407 + H DM MG L K MPWT A + LA++ +P +GF+S+ Sbjct: 365 AMHHEQDMRWMGGLRKNMPWTFATFTLATLALAGLPLTSGFMSK 408 >UniRef50_B2KDU4 NADH dehydrogenase (Quinone) n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KDU4_ELUMP Length = 470 Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 125/476 (26%), Positives = 226/476 (47%), Gaps = 41/476 (8%) Query: 20 ASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFA--PPFEFADLTLRM 77 S+F+ ++L +K + L+G + ++S +AG ++ PF F ++ Sbjct: 12 GSIFITPFNKLGVKPAVTAMLIGSAVFVLSVFQLTYAGTGAEVSWSLQMPFGFGP-HFKL 70 Query: 78 DSLSAFMVLVISLLVVVCSLYSLTYM--REYEGKGAAAMGFFMNIFIASMVALLVMDNAF 135 D L+AFM S L ++ YS Y+ ++YE + + +F+ SM+ L+ N Sbjct: 71 DMLAAFMAACSSFLSLIIIFYSTGYIHDKDYENEYYT----MVILFLGSMMGLVFSFNLV 126 Query: 136 WFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFA 195 W V +E+ ++ SW LV + T + F I G++ +++ + +G++D Sbjct: 127 WTFVFWELTAICSWRLVGFFRGDTDKKKAVKTFLITVFGALFLLLGIAALYFTNGTVDLT 186 Query: 196 SFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALM-SGVMVKIG 254 + S P + A+ + F +K+ ++P +WLP A APS +AL+ + V+VKIG Sbjct: 187 LLKG-SRVPLIVCALLVAGMF---SKSAILPFSTWLPDAG-VAPSPVTALLHAAVLVKIG 241 Query: 255 IFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGI 314 ++ +V + L G V I +S+L+ A+ E +IKR++A+ST+ +G Sbjct: 242 VYVFARVFYTVNLDPSL----GHAVALIAGVSSLIAGGAAVTETNIKRIIAYSTISQLGF 297 Query: 315 ILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKM 374 I LA+ T +GL+ + ++ H KG LFL AG I + HT D+ KM Sbjct: 298 IFLALSTR-----------TALGLVAGMLFIMMHGAAKGGLFLCAGIIEHKTHTKDITKM 346 Query: 375 GALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMV 434 G L K MP T I L++ IPP+ GF S++ ++S A G + Sbjct: 347 GGLFKVMPLTGLVFAICALSVMGIPPMGGFFSKFMVFKS----------ASAAGGVLVFA 396 Query: 435 MLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIAL 490 + + ++++ I F G+P E E ++++ +LA L V++++ Sbjct: 397 IFILAACFTAAYLLRVFHIVFLGSP-GVEWEMGPEGSKQTLISVSILAVLTVVMSV 451 >UniRef50_D2SDG3 Proton-translocating NADH-quinone oxidoreductase, chain M n=8 Tax=Actinomycetales RepID=D2SDG3_9ACTO Length = 544 Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 111/415 (26%), Positives = 208/415 (50%), Gaps = 30/415 (7%) Query: 43 GVIGIISGITQLHAGVTLVARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTY 102 G G++ GI + R+ P + A + +D LS ++ + +L + C+++S Sbjct: 55 GASGVVDGIAY-----EVDVRWIPTVD-AGYHVGVDGLSLPLLALTGVLFLACAVWS--P 106 Query: 103 MREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSIN 162 E + AA+ F+ A L + F V F++ + +F++ + Sbjct: 107 REEDRPRSFAALFLFLQTACLGTFAAL---DLILFFVFFDLTIVGMYFIIAGWGHGNARR 163 Query: 163 AGMLYFFIAHAGSVLIMIAF--LLMGRESGSLD---FASFRTLSLSPGLASAVFLLAFFG 217 + + +F GS+ +++ F L +G E + D A L+ SP V L G Sbjct: 164 SALKFFLYTFVGSLALLVGFIGLFLGGEERTFDMVALAQDPPLADSPVAGGLVLLAIGLG 223 Query: 218 FGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLW--W 275 K + P H+WLP AH AP+ SA+++GV++K+G +G +++AM +L + W W Sbjct: 224 LAVKTPLFPFHTWLPDAHTDAPAPGSAILAGVLLKLGTYGFVRIAMPILPEA----WQRW 279 Query: 276 GILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTV 335 ++++ +G +S L G ALA+ D+KR++A+++V ++G +LL +G A + ++ D Sbjct: 280 AMVIVVLGVVSVLWGAFVALAQTDVKRMIAYTSVNHMGYVLLGLGAAGL-VASADQGART 338 Query: 336 VGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAI 395 V +GA++ +++H L G LFL +G + SR T+D + LA+ P AA+ + Sbjct: 339 VATVGAVYQMVSHGLLTGALFLLSGVLWSRGRTYDSGRWSGLARPAPVFAASLAVAAFGS 398 Query: 396 SAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKM 450 +P L+GFI+E+ + + V V +A+V + VT GL ++ ++ Sbjct: 399 LGLPGLSGFIAEFQVFAGALPAAPVATV-------LAVVGILVTAGLFLVALQRL 446 >UniRef50_Q67KP4 NADH dehydrogenase I subunit L n=1 Tax=Symbiobacterium thermophilum RepID=Q67KP4_SYMTH Length = 685 Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 138/482 (28%), Positives = 217/482 (45%), Gaps = 59/482 (12%) Query: 69 EFADLTLRM----DSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIAS 124 F T+RM D+L+A M+ +I+L+ V YS YM + K +N+F + Sbjct: 81 SFGPYTVRMGFQVDNLTALMLPMITLVSVCVQYYSSAYM--HGDKRIPRFYAALNLFTMA 138 Query: 125 MVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLY-FFIAHAGSVLIMIAFL 183 M+ L++ DN F +V +E+M L S+ L+ ++ G + F G + +M+ Sbjct: 139 MLVLVMADNLFLLLVAWEIMGLCSYLLIGHWYEQAWPRYGQIKAFLTTRVGDIGMMVGIF 198 Query: 184 LMGRESGSLDFASFRT----LSLSPGLASAVFLLAFF---GFGAKAGMMPLHSWLPRAHP 236 ++ + L +A L P AS + L AF G K+ PLH+WLP A Sbjct: 199 IVFFAARDLTWAGLAEKVPVLVQDPATASLLALGAFLLFTGAIGKSAQFPLHTWLPDAM- 257 Query: 237 AAPSHASALM-SGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYAL 295 A P+ SA++ + MV G++ + + M +P W ++V +GA ++L A Sbjct: 258 AGPTPGSAIIHAATMVAAGVYLVGRAFMIF---GHVPAWVLVVVTFVGAFTSLFAASIAT 314 Query: 296 AEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLL 355 DIK +LA+ST+ +G +++A+G+ G FHLL HA FK LL Sbjct: 315 LRWDIKEVLAYSTISQLGYMIMAMGLG--------------GWTAGNFHLLTHAFFKALL 360 Query: 356 FLGAGAII-SRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFIS-------- 406 FL AG++I + H + KMG L K++P T ++G A++ IP +GF S Sbjct: 361 FLAAGSVIHAHHHNQLLHKMGGLRKKIPITFWTWMVGYAALAGIPGFSGFFSKDELLLAA 420 Query: 407 -EWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTH-A 464 EW+ L + LQ P AM + T L + + F G PR H Sbjct: 421 LEWHN-----PLVATWPIWLQKL-PFAMAL--TTAFLTAYYMTRATYLAFFGEPRDMHLY 472 Query: 465 EEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGT 524 E+A E P M + +++LA L WL + + FTN +PG Sbjct: 473 EQAHESPKAMTIPLIILAVPAALY----GWLGTPLF---NHFTNLDWMVFIQNFLHLPGL 525 Query: 525 FH 526 H Sbjct: 526 EH 527 >UniRef50_A7HHY8 Proton-translocating NADH-quinone oxidoreductase, chain L n=4 Tax=Anaeromyxobacter RepID=A7HHY8_ANADF Length = 676 Score = 135 bits (341), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 124/426 (29%), Positives = 196/426 (46%), Gaps = 46/426 (10%) Query: 75 LRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNA 134 L +D LS M++V++ + + +YS +YM + G A ++N+F+A+M+ L++ D Sbjct: 94 LFVDRLSGTMIMVVTGVGTLIHIYSASYMSHEDDAGYARYFTYLNLFVAAMLTLVLGDTL 153 Query: 135 FWFIVLFEMMSLSSWFLV-IARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLD 193 V +E + L S+ L+ D AG F G +I + G+ Sbjct: 154 VLTFVGWEGVGLCSYLLIGFWYTDPAKAFAGRKAFVTNRIGDFGFLIGLFALLSIFGTAS 213 Query: 194 FASFRTL--SLSPGLASAVFLLA---------------FFGFGAKAGMMPLHSWLPRAHP 236 + + + ++ P V A F G K+ +PL+ WLP A Sbjct: 214 YGDLQAIARTIDPAATIQVGTFAGRTFQWAITFALIGLFVGACGKSAQLPLYVWLPDAM- 272 Query: 237 AAPSHASALM-SGVMVKIGIFGILKVAMDL-LAQTGLPLWWGILVMAIGAISALLGVLYA 294 A P+ SAL+ + MV G++ + + A LA + V +GA++AL L A Sbjct: 273 AGPTPVSALIHAATMVTAGVYLVARNAYLFSLAPAAMA-----TVTIVGALTALFAALIA 327 Query: 295 LAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGL 354 + DIK++LA+STV +G + + VGV + HL+ HA FK Sbjct: 328 FVQTDIKKVLAYSTVSQLGFMFIGVGVG--------------AWWAGVLHLVTHAFFKAC 373 Query: 355 LFLGAGAIISRLHTH-DMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFIS-EWYTWQ 412 LFLGAG+++ + D+ KMG L K+MP TAA I LAI+ PL+GF S + Sbjct: 374 LFLGAGSVMHGMGDETDIRKMGGLLKKMPHTAATFGIATLAITGFVPLSGFWSKDAILGN 433 Query: 413 SLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPN 472 +LFS + A G IA V+ AV +++ +TF G PR+ AE A E Sbjct: 434 ALFSHNP----AWHQVGQIAYVLGAVAALGTAFYMSRLFFLTFVGKPRTHAAEHAHESSP 489 Query: 473 TMIVAM 478 M + + Sbjct: 490 VMTIPL 495 >UniRef50_C9RJK6 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RJK6_FIBSS Length = 647 Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 140/476 (29%), Positives = 227/476 (47%), Gaps = 68/476 (14%) Query: 67 PFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMV 126 P D+ D LS M+L ++ + + +LYS+ YM + +G A ++N+F+ SM+ Sbjct: 75 PMFRVDIGFLFDGLSRIMLLFVTGIGSLIALYSIGYM--HGDRGFARYFAYINLFLFSMI 132 Query: 127 ALLVMDNAFWFIVLFEMMSLSSWFLV-IARQDKTSINAGMLYFFIAHAGSVLIMIAFLLM 185 L++ DN + +E + L S+ L+ +D + +A F + G + ++ L + Sbjct: 133 VLVLSDNLLLTFLGWEGVGLCSYLLIGFWNKDIKNCHAANKAFIVNRVGDIGFLLGMLCL 192 Query: 186 GRESGS--LDF---ASFRTLSLSPGLASAVF-------LLAFFGFGAKAGMMPLHSWLPR 233 GS L++ +F ++ +S V +L F G K+ +PL +WLP Sbjct: 193 VTIGGSAILNYDVLTNFISMVISGNHVDLVIPVLSIAGILFFIGCTGKSAQIPLLTWLPD 252 Query: 234 AHPAAPSHASALM-SGVMVKIGIFGILKVAMDLLAQTG-----LPLWWGILVMAIGAISA 287 A A P+ SAL+ + MV G++ LLA+ G LP+ I+V+ +G ++A Sbjct: 253 AM-AGPTPVSALIHAATMVTSGVY--------LLARLGSMFALLPVVLDIIVV-VGMLTA 302 Query: 288 LLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLN 347 + L + DIK++LA+ST+ +G + +A GV S +FH+ Sbjct: 303 FWAAVAGLFQNDIKKVLAYSTISQLGYMFMASGVCAFDAS--------------IFHVFT 348 Query: 348 HALFKGLLFLGAGAIISRLH-THDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFIS 406 HA FK LFLGAGA+I L DM KMG L K+ P TA + LAI P +GF S Sbjct: 349 HAFFKAALFLGAGAVIHALSGEQDMRKMGGLLKKTPVTACVMIFAFLAIVGFPGFSGFWS 408 Query: 407 EWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEE 466 + + +F +S A+ + G I V+ AV G ++ +TF G+ R + E Sbjct: 409 KDLILEKIF-MSGTMGQAVYVVGLITAVITAVYMGRLII-------LTFFGSYRGSKESE 460 Query: 467 A--QEVPNTMIVAMLLLA----------ALCVLIALSASWLAPKIMHIAHAFTNTP 510 E P M++ M++LA A + I A LAP ++ A A+ NTP Sbjct: 461 EHIHEAPAVMLIPMVILAFGAVFAGYLWADSIGIKFFAETLAP-VVGAAQAY-NTP 514 >UniRef50_Q1IS54 Proton-translocating NADH-quinone oxidoreductase, chain L n=2 Tax=Acidobacteria RepID=Q1IS54_ACIBL Length = 710 Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 124/438 (28%), Positives = 210/438 (47%), Gaps = 51/438 (11%) Query: 69 EF-ADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVA 127 EF A+ +D LS+ +L ++ + ++ +YS YM+ ++G G+ +N+F+ SM+ Sbjct: 96 EFKAEAGFLLDPLSSIWLLFVTGVGMLIHIYSTGYMK-HDGGYYRFFGY-LNLFMFSMLT 153 Query: 128 LLVMDNAFWFIVLFEMMSLSSWFLV-IARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMG 186 L++ +N V +E + L S+ L+ K++ A F G +++ + Sbjct: 154 LILGNNYAMMFVGWEGVGLCSYLLIGFYFHKKSASTAANKAFITNRIGDAGVLVGMFTIA 213 Query: 187 RESGSLDFASFRTLSLSPGLASAVFLLAF------FGFGAKAGMMPLHSWLPRAHPAAPS 240 GS++F + S + + + F G K+ +PL+ WLP A P+ Sbjct: 214 WYFGSINFTKVTQAARSGIFHTGDYWITFATIALFIGACGKSAQLPLYVWLPDAMEG-PT 272 Query: 241 HASALM-SGVMVKIGIFGILKV-AMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQ 298 SAL+ + MV G++ + + A+ +LA + + V +GA++A+ L + Sbjct: 273 PVSALIHAATMVTAGVYMVARSNALYILAPNSMKV-----VAIVGALTAVFAASIGLVQN 327 Query: 299 DIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLG 358 DIKR+LA+STV +G + LA+G+ +FH+ HA FK LLFLG Sbjct: 328 DIKRVLAYSTVSQLGYMFLALGLG--------------AFTAGVFHVFTHAFFKALLFLG 373 Query: 359 AGAIISRLH-THDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISE----WYTWQS 413 +G++I + DM MGAL K++P T G LAI+ IPPL GF S+ W W S Sbjct: 374 SGSVIHAMSGEQDMRFMGALRKKIPVTFWTMFAGTLAIAGIPPLAGFFSKDEILWQAWSS 433 Query: 414 LFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEE--AQEVP 471 RV L G + +M + + ++ +TF G PR +H E E P Sbjct: 434 NGGTFRV----LWGIGFLTALMTS-------LYMFRLVYLTFFGQPRMSHEVEHHVHESP 482 Query: 472 NTMIVAMLLLAALCVLIA 489 +M +++L A+C + A Sbjct: 483 KSMTGPLVIL-AICAVFA 499 >UniRef50_C5CHQ8 NADH/Ubiquinone/plastoquinone (Complex I) n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CHQ8_KOSOT Length = 611 Score = 135 bits (340), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 126/409 (30%), Positives = 195/409 (47%), Gaps = 48/409 (11%) Query: 130 VMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRES 189 ++ N F +++F ++ S ++I K + + Y + G+ +M A L+ Sbjct: 115 MLSNDFLTLLIFWELTTWSSLIMIVLDKKIAWKEALKYVAVGSIGTYSMMYAVFLLYNRF 174 Query: 190 GSLDFASFRT--LSLSPGLASAVF-LLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALM 246 G+L + + S G +F LLA F AKAG PLH WL AH +AP S+++ Sbjct: 175 GTLIYTDVANELMKTSGGFQLLIFILLAVMAF-AKAGSFPLHIWLRGAHSSAPDEFSSIL 233 Query: 247 SGVMVKIGIFGILKVAMDLLAQT----------GLPLWWGILVMAIGAISALLGVLYALA 296 SG + K+G F ++ + + +L T G+PL IL + G IS ++G + A+ Sbjct: 234 SGALTKMGAF-LMFIVVAVLPSTKFFAWMPEVQGIPLPNYILALLSG-ISIIVGTVMAIR 291 Query: 297 EQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLF 356 +D K+L+A+STV N G IL+A L++ P T G L H+LNHAL +F Sbjct: 292 MEDAKQLIAFSTVSNSGYILMA-------LAIGGPYATA----GGLMHVLNHALASSAMF 340 Query: 357 LGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFS 416 L A+ R T M +MG L RMP+T A L+ ++I+ IPP++GF S+W +Q L Sbjct: 341 LAIAAVAHRTGTTKMHEMGGLIFRMPFTFTAYLVAIISIAGIPPMSGFASKWLIYQQLVR 400 Query: 417 LSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIV 476 + G I M F + GI F G + H + +E P M+V Sbjct: 401 NGLPFLAFMAFFGSIGSFMY---------VFKPLAGI-FLGQLKPQH-KNIKEAPIPMLV 449 Query: 477 AMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTF 525 +M++L L + + S A +FTN V GIA + TF Sbjct: 450 SMMVLTLLTIFWGILPS--------NAISFTNKISEQV--GIATIKTTF 488 >UniRef50_Q12ZH7 Na+/H+ antiporter subunit n=2 Tax=Methanosarcinaceae RepID=Q12ZH7_METBU Length = 788 Score = 135 bits (340), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 125/437 (28%), Positives = 204/437 (46%), Gaps = 38/437 (8%) Query: 72 DLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVM 131 + T+ D L+ + + S + V+ YS YM E ++ +F+ SM+ ++ Sbjct: 73 NFTIYADGLATMIGFIASGIGVLIMSYSNGYMSRTEDLTRYYQ--YLLLFMGSMIGMVFS 130 Query: 132 DNAFWFIVLFEMMSLSSWFLV-IARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESG 190 N + +E+ S++S+ L+ R SI + +G + ++ FLL+G +G Sbjct: 131 GNTIQLFIFWELTSITSFMLIGYWRHKPESIYGATKSLLLTASGGLAMLAGFLLLGNITG 190 Query: 191 SLDFASFRTLSLSPGLASAV---------FLLAFFGFGAKAGMMPLHSWLPRAHPAAPSH 241 S + A+ P + +A+ +L G AK+ P + WLP A A Sbjct: 191 SFELAAILN---DPQVINAIKEHELFLITLILILIGAAAKSAQGPFYIWLPNAMEAPTPV 247 Query: 242 ASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIK 301 ++ L S MVK GI+ + ++ +G W+ ILV G I+ L+ A + DIK Sbjct: 248 SAFLHSATMVKAGIYLVARIHPIF---SGTEAWF-ILVSGTGIITMLVAGFLAFRQTDIK 303 Query: 302 RLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGA 361 +LA+ST+ + ++ G + H+P +G+ A FHLLNHA FK LFL AG Sbjct: 304 GILAYSTISQLAYMMTMYGYT----THHEP---GIGVAAATFHLLNHAAFKACLFLVAGI 356 Query: 362 IISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVE 421 + T D+ K+G L + MP T I LA++ IPPLNGF+S + +F S +E Sbjct: 357 VAHEAATRDIRKLGGLRREMPITFIIACIAGLAMAGIPPLNGFLS-----KEMFYESSIE 411 Query: 422 AVALQLAGPIAMVM--LAVTGGLAVMCF-VKMYGITFCGAPRSTHA--EEAQEVPNTMIV 476 A + G ++ AV GG+ + +K+ F G R +A E P TM++ Sbjct: 412 MGA-SIGGIFTFLIPAFAVLGGVFTFAYSIKLIDGIFLGE-RDKNAIPHHIHEPPMTMLI 469 Query: 477 AMLLLAALCVLIALSAS 493 LA L +L + S Sbjct: 470 PPAFLAFLVILFGVIPS 486 >UniRef50_B2IHV5 Proton-translocating NADH-quinone oxidoreductase, chain L n=8 Tax=cellular organisms RepID=B2IHV5_BEII9 Length = 666 Score = 135 bits (340), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 135/460 (29%), Positives = 211/460 (45%), Gaps = 71/460 (15%) Query: 72 DLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVM 131 D LR+D+L+A M++V++ + + LYS+ YM E + + +++ F +M+ L+ Sbjct: 74 DWALRIDTLTAVMLVVVTTVSALVHLYSIGYMHEDPSR--SRFFAYLSFFTFTMLTLVTA 131 Query: 132 DNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAH-AGSVLIMIAFLLMGRESG 190 DN +E + L+S+ L+ +K S A + F+A+ G ++ L+ + Sbjct: 132 DNLVQMFFGWEGVGLASYLLIGFWYEKPSACAAAIKAFVANRVGDFGFLLGIFLVFLLTH 191 Query: 191 SLDFASFRTLSLSPGLASA---VF-----------LLAFFGFGAKAGMMPLHSWLPRAHP 236 S+ F + + +P LA VF LL F G K+ LH+WLP A Sbjct: 192 SVSFD--QVFAAAPSLAGKSLHVFGHDFDAMTITCLLLFMGAMGKSAQFLLHTWLPDAME 249 Query: 237 AAPSHASALM-SGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYAL 295 P+ SAL+ + MV G+F + +++ L Q + L V IGA +A L Sbjct: 250 G-PTPVSALIHAATMVTAGVFMVARLS-PLFEQAPVAL---SFVTIIGATTAFFAATVGL 304 Query: 296 AEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLL 355 + DIKR++A+ST +G + +A+GV G SL +FHL HA FK LL Sbjct: 305 VQNDIKRVIAYSTCSQLGYMFVALGVG--GYSL------------GIFHLFTHAFFKALL 350 Query: 356 FLGAGAIISRL-HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSL 414 FLGAG++I + H DM KMGAL R+P+T +G LA++ P G+ S+ ++ Sbjct: 351 FLGAGSVIHAMHHEQDMRKMGALRDRIPFTFWMMTLGTLALTGFPLTAGYFSKDAIIEAA 410 Query: 415 FSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPR-------------- 460 F+ R A L G +A V V GL ++ +TF G Sbjct: 411 FASERTGA----LYGYVATV---VAAGLTSFYSWRLVFMTFFGPAHWGADAHAAHDDHGH 463 Query: 461 ----------STHAEEAQEVPNTMIVAMLLLAALCVLIAL 490 HA E E P M + +L+L A V L Sbjct: 464 AHASGHDDHGHAHALEPHEPPFVMRLPLLILGAGAVFAGL 503 >UniRef50_B1I6I4 NADH dehydrogenase (Quinone) n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I6I4_DESAP Length = 554 Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 108/349 (30%), Positives = 183/349 (52%), Gaps = 33/349 (9%) Query: 73 LTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMN--IFIASMVALLV 130 L R+D+ L+ S L +V S+YS+ YMR K G+F + + +++ V + + Sbjct: 76 LHFRVDAFGLLFALLASGLWIVTSVYSIGYMRSL--KYGHETGYFASFAVCLSAAVGIAM 133 Query: 131 MDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYF-FIAHAGSVLIMIA----FLLM 185 N F + +E+++++++ LVI R++ +++ G Y ++ AG VL++ +L+ Sbjct: 134 SGNLLTFFIFYEILTIATYPLVIHRRNAEAVSGGREYMVYLLLAGQVLLIAVAWAHYLVP 193 Query: 186 GRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASAL 245 G F + S+ G +F+L G G KA ++PLH WLP A AP+ SAL Sbjct: 194 GAAFTPGGFLAASGASV--GALQVLFVLFMVGVGVKAAVLPLHGWLPTAM-VAPTPVSAL 250 Query: 246 MSGV-MVKIGIFGILKV-----AMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQD 299 + V +VK G F +++V +L+ + G+ G+++ A + + L AL+E Sbjct: 251 LHAVAVVKAGAFAVVRVTGFVFGPELMGELGV----GVILAWFAAATIIFASLRALSEDH 306 Query: 300 IKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGA 359 +KR LA+STV + ++L +A T +LGA+FH++ HA K LF A Sbjct: 307 LKRRLAYSTVSQLSYVVLGAALA-----------TPAAILGAMFHIVAHAFMKITLFFCA 355 Query: 360 GAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEW 408 GAI + H + ++ L +RMP+T A LAI+ +P L GFIS+W Sbjct: 356 GAIYATTHKEYIRELDGLGRRMPYTMGAFAAAALAITGMPLLVGFISKW 404 >UniRef50_Q3AH00 Proton-translocating NADH-quinone oxidoreductase, chain L n=6 Tax=Chroococcales RepID=Q3AH00_SYNSC Length = 669 Score = 135 bits (339), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 123/413 (29%), Positives = 198/413 (47%), Gaps = 54/413 (13%) Query: 77 MDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFW 136 +D L A M+ +++ + ++ +YS YM KG ++ +F +SM+ L++ N Sbjct: 89 VDPLGAVMLALVTTIALLVLVYSHGYMAH--DKGYVRFFTYLALFSSSMLGLIISPNLLE 146 Query: 137 FIVLFEMMSLSSWFLVIARQDKT-SINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFA 195 V +E++ + S+ LV D+ + +A F + G +++ L + +GS DF Sbjct: 147 IYVFWELVGMCSYLLVGFWYDRDGAAHAAQKAFVVNRVGDFGLLLGILGLFWATGSFDFQ 206 Query: 196 SFRTLSLSPGLASAVF---------LLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALM 246 L GLA+ LL F G AK+ PLH WLP A P+ SAL+ Sbjct: 207 GIAD-GLQNGLAAGTVAPWAALLLCLLVFMGPMAKSAQFPLHVWLPDAM-EGPTPISALI 264 Query: 247 -SGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLA 305 + MV G+F + ++ L AQ P+ ++ + +G I+ LG AL + D+K+ LA Sbjct: 265 HAATMVAAGVFLVARLD-PLYAQ--FPVVQTVIAV-VGTITCFLGASIALTQMDLKKGLA 320 Query: 306 WSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISR 365 +STV +G ++LA+G + +FHL+ HA FK +LFLG+G++I Sbjct: 321 YSTVSQLGYMMLAMGCG--------------APVAGIFHLVTHAFFKAMLFLGSGSVIHA 366 Query: 366 LHT---------HDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFS 416 + DM MG L K+MP T+ IGC+AIS IPPL GF S+ F+ Sbjct: 367 MEEVVGHEPVLAQDMRLMGGLRKKMPVTSITFFIGCIAISGIPPLAGFWSKDEILGQAFN 426 Query: 417 LSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTH-AEEAQ 468 + P+ V+ +T G+ ++Y +TF G R A +AQ Sbjct: 427 -----------SYPLLWVVGFLTAGMTAFYMFRLYFLTFEGEFRGNDTAMQAQ 468 >UniRef50_A5UVF8 Proton-translocating NADH-quinone oxidoreductase, chain L n=5 Tax=Chloroflexaceae RepID=A5UVF8_ROSS1 Length = 654 Score = 135 bits (339), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 128/437 (29%), Positives = 204/437 (46%), Gaps = 64/437 (14%) Query: 75 LRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGF-FMNIFIASMVALLVMDN 133 L D L+A M L+I+ + + +YS+ YM G F FMN+F+ +M+ L++ DN Sbjct: 80 LLFDPLTAVMALLITGVGGLIHIYSIGYM---HGDVRPVRFFAFMNLFVFAMLMLVMADN 136 Query: 134 AFWFIVLFEMMSLSSWFLVIARQDKTSI-------NAGMLYFFIAHAGSVLIMIAFLLMG 186 + +E + L S+ L+ D+ S+ A + F + G ++ A + Sbjct: 137 LLLLFLGWEGVGLCSFLLIGHYFDRRSVPPGINPSEAAVKAFVVNRVGDAAMLAALFAIF 196 Query: 187 RESGSLDFASFRTLSLSPGLASAVF---------------------LLAFFGFGAKAGMM 225 G+L F LS+S L A+ LL K+ Sbjct: 197 TNFGTLSFYDNPQLSISGYLDQAIVVAGETVDLGAFGQLPLMTGITLLMLVAVAGKSAQF 256 Query: 226 PLHSWLPRAHPAAPSHASALM-SGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGA 284 PL++WLP A A P+ SAL+ + MV G++ I++ L Q W V+ IG Sbjct: 257 PLYTWLPDAM-AGPTPVSALIHAATMVTSGVYLIVR-NHTLFDQPASAAPW---VLVIGV 311 Query: 285 ISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFH 344 ++A +G A+A+ DIKR+LA+STV +G ++ AVG+ + ++H Sbjct: 312 MTAFIGATAAVAQLDIKRVLAYSTVSQLGYMVAAVGMG--------------AYVAGMYH 357 Query: 345 LLNHALFKGLLFLGAGAIISRLHTH-DMEKMGALAKRMPWTAAACLIGCLAISAIPPLNG 403 LL H LFK LLFL AG++I + H DM +MG L +P T +IG LA+S I PL G Sbjct: 358 LLTHGLFKALLFLAAGSVIHGIGDHQDMRRMGGLRNALPTTFRLYVIGALALSGIFPLAG 417 Query: 404 FISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPR--S 461 F S+ + + + +A + P+A +ML +T + + G+ F G PR + Sbjct: 418 FWSK----DEIIAHAWFDARS-----PLAAIMLILTSAVTAFYMGRQIGMVFFGRPRDPT 468 Query: 462 THAEEAQEVPNTMIVAM 478 H E+ +VA+ Sbjct: 469 IHGHESGAAMRWTMVAL 485 >UniRef50_B8J1C9 Proton-translocating NADH-quinone oxidoreductase, chain L n=4 Tax=Bacteria RepID=B8J1C9_DESDA Length = 642 Score = 135 bits (339), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 127/443 (28%), Positives = 206/443 (46%), Gaps = 52/443 (11%) Query: 77 MDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFF--MNIFIASMVALLVMDNA 134 +D L+A M++V++ + + +YS+ YM+ +G FF + +F SM+ L++ +N Sbjct: 79 VDQLTAVMLIVVTSVSTLVHIYSVGYMKGEDGY----YRFFAYLALFSFSMLMLVLSNNF 134 Query: 135 FWFIVLFEMMSLSSWFLVIARQDKTSI-NAGMLYFFIAHAGSVLIMIAFLLMGRESGSLD 193 +E + LSS+ L+ +KTS +AG F + G ++ + GSL Sbjct: 135 LQLFFGWEAVGLSSYLLIGFYYEKTSASDAGKKAFIVNRFGDFGFLLGLFCIFTLFGSLH 194 Query: 194 FA------------SFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSH 241 + S+ +S A+ V LL F G K+ +PLH WLP A P+ Sbjct: 195 YDNVFARAGLLQGLSYTIGGISIDAATLVCLLLFCGAAGKSAQLPLHVWLPDAMEG-PTP 253 Query: 242 ASALM-SGVMVKIGIFGILKV-AMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQD 299 SAL+ + MV G+F + + A+ L+ T L + + +GA++AL AL + D Sbjct: 254 VSALIHAATMVTAGVFLVARCNALFSLSPTALGV-----ITVVGALTALFAATIALTQTD 308 Query: 300 IKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGA 359 IKR++A+ST+ + + + GV +FHL HA FK LLFLG Sbjct: 309 IKRVVAYSTISQLAFMFIGCGVGAYA--------------AGIFHLFTHAFFKALLFLGC 354 Query: 360 GAIISRLH-THDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLS 418 G++I +H DM +MG L K MP T L+ L+IS +P L GF S+ + L Sbjct: 355 GSVILGMHHEQDMRRMGGLRKYMPVTCVTFLLASLSISGVPGLAGFFSK---DEILLMAF 411 Query: 419 RVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAM 478 + A A + + +T + F ++ F G E +E P + + + Sbjct: 412 NADTTAGYFAWGVGTFVAFLTAFYSFRLFFSIFYGEFRGTQHQR--EHLRESPLVVTIPL 469 Query: 479 LLLAALCVLIALSASWLA-PKIM 500 LLLA A+ A WL P ++ Sbjct: 470 LLLAC----GAVGAGWLGIPHVL 488 >UniRef50_A6UVJ7 NADH dehydrogenase (Quinone) n=1 Tax=Methanococcus aeolicus Nankai-3 RepID=A6UVJ7_META3 Length = 470 Score = 135 bits (339), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 101/330 (30%), Positives = 168/330 (50%), Gaps = 23/330 (6%) Query: 87 VISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSL 146 +ISLL ++ S YS+ Y + + + F+++M + D+ + E ++ Sbjct: 68 IISLLFLMVSYYSIDYFKNSNYESEHIYSSMLLFFVSAMSLTAISDHIILTWIAIEATTI 127 Query: 147 SSWFLVIARQDKTSINAGMLYFF-------IAHAGSVLIMIAFLLMGRESGSLDFASF-- 197 SS L+ + + S+ A Y +A GS +I+ +F + SG L F++ Sbjct: 128 SSAPLIFLHKTRDSVMATWKYIITCSVGISLALLGSFIILQSFTQPIQVSGLL-FSNLMA 186 Query: 198 RTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFG 257 T +++P F+ G+G K G+ P+H WL AH APS ASAL+SG ++ Sbjct: 187 YTGTINPLWFLVGFVFILIGYGTKVGLAPMHIWLSDAHGEAPSPASALLSGALLNCAFLP 246 Query: 258 ILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILL 317 I K+ + L L G +++A+G S + + A++D KRLLA+S++EN+GII+L Sbjct: 247 IYKINV-LAGYLNLGEITGKMMIALGLFSVFVAAAFMPAQKDYKRLLAYSSIENMGIIVL 305 Query: 318 AVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGAL 377 G+ + L LG++FH++NH+L K LFL G ++ + T D+ K+ Sbjct: 306 GAGIGGIAL------------LGSIFHMINHSLIKCALFLATGNMLLQYGTKDISKVKNF 353 Query: 378 AKRMPWTAAACLIGCLAISAIPPLNGFISE 407 K +P TA A +G + IS PP F+SE Sbjct: 354 FKLLPKTAFAFTLGAIGISGFPPFGLFLSE 383 >UniRef50_B8DS12 NADH dehydrogenase (Quinone) n=2 Tax=Desulfovibrio RepID=B8DS12_DESVM Length = 594 Score = 134 bits (338), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 133/443 (30%), Positives = 207/443 (46%), Gaps = 61/443 (13%) Query: 76 RMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKG---AAAM---GFFMNIFIASMVALL 129 R+D LS LV + + V S+ + Y E +G AAA+ G F +F + L Sbjct: 65 RVDKLS----LVFAQVFAVMSVAGMLYAMHVEDRGQHIAAALYVSGGFGCVFAGDYLTLF 120 Query: 130 VMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRES 189 V FW E+MS+ S FLV+ + + S+ AG YF AG +L++ LL + Sbjct: 121 V----FW-----ELMSIGSTFLVLLNRTRESVLAGFRYFLYHTAGGLLLLAGLLLRYKAL 171 Query: 190 GSLDFASFRTLSLSPGLASAVF-LLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSG 248 G+ +F + ++P + ++ L GF A ++PLH+WLP A+P S M Sbjct: 172 GTWEFTA-----MAPSANAPLYEWLILAGFCVNAAVVPLHAWLPDAYPRGTVTGSVFMCA 226 Query: 249 VMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWST 308 K ++ +LA+ G W ++ A G + A+ GVLYA E + +R+L++ Sbjct: 227 YTTKTAVY--------VLAR-GFAGW--EILAAAGTVMAVYGVLYACIENNARRILSYHI 275 Query: 309 VENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHT 368 V VG ++ +GV T + L GA+ H H L+KGLLF+G G ++ T Sbjct: 276 VSQVGYMVAGIGVG-----------TAMTLNGAVAHAYAHILYKGLLFMGTGCLLYAAGT 324 Query: 369 HDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLA 428 ++K+G LA R+PW ++ L+IS +P NGFIS+ T R VAL L Sbjct: 325 AKLDKLGGLAARLPWVMVLYMVAALSISGMPVFNGFISKTMTITGAAEAHRT-LVALGL- 382 Query: 429 GPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLI 488 IA V ++ G+ + F F G + + +P M M +LA LC+L Sbjct: 383 -EIAAVGTFISVGIKLPYF------AFWGGKPTDNDRVLAPIPWNMYAGMTVLAVLCILQ 435 Query: 489 ALSASWLAPKIMHIAHAFTNTPP 511 +AP I++ F P Sbjct: 436 G-----VAPSILYAYLPFEVEHP 453 >UniRef50_B8CXD7 NADH dehydrogenase I subunit L n=1 Tax=Halothermothrix orenii H 168 RepID=B8CXD7_HALOH Length = 506 Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 98/350 (28%), Positives = 186/350 (53%), Gaps = 30/350 (8%) Query: 73 LTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFI--ASMVALLV 130 + + +D L F ++I++ + + LYS+ ++ +EGK +++ +F+ A+M +++ Sbjct: 75 INIAVDGLGLFFTILINIAMFLIILYSIGFIGHHEGK------YYVLLFLLFAAMQGVVL 128 Query: 131 MDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESG 190 + F V E+++++S LV + + AG+ Y +L I +++ + +G Sbjct: 129 TGDIFNQYVFIELITVASAPLVAFTRTEKGTEAGIKYLIYGIISGLLFFIGIVIIYQTTG 188 Query: 191 SLDFA----SFRTLSLSP-GLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASAL 245 +L+ A F+ + L+ +FL + K G+ P H WL +AH A PS SAL Sbjct: 189 ALNMAIVADRFKHIPLTTRNFIKVIFLTSLL---IKLGVFPFHFWLAKAHSACPSSISAL 245 Query: 246 MSGVMVKIGIFGILKVAMDLLA-QTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLL 304 +SG+++K+ I+ +++ + G L I+ MA+ +S+LLG ++AL E+DIKR+L Sbjct: 246 LSGLLLKVYIYVFIRLFWTVFGINQGDKLLPVIIYMAL--VSSLLGHIFALQEEDIKRVL 303 Query: 305 AWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIIS 364 A+S++ + GII +G +G ++ G+ G L H+++H K LFLG G ++ Sbjct: 304 AFSSIAHTGII---IGSLFLG--------SISGVYGGLIHVISHLTMKITLFLGVGYLLK 352 Query: 365 RLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSL 414 H ++K+ +A P + LA+ IPPLNGF +W+ ++ Sbjct: 353 FTSEHRIKKLKGIAYINPPVTLSIFTAGLAMIGIPPLNGFYGKWFILKAF 402 >UniRef50_Q73G56 Na+/H+ antiporter subunit, putative n=9 Tax=Wolbachia RepID=Q73G56_WOLPM Length = 488 Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 119/442 (26%), Positives = 213/442 (48%), Gaps = 40/442 (9%) Query: 65 APPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIAS 124 APP+ + LR+D L++ ++ +++ + ++ LYS Y+ E E GF+ + Sbjct: 63 APPY---GIELRIDVLNSLILTLVNFIALISVLYSF-YINEKEISKNKITGFYSLFLLCL 118 Query: 125 MVALL--VMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAF 182 L V ++ F V E+ SLSS+ LV +DK ++ A Y G+ + Sbjct: 119 SGLLGILVTNDIFNLYVFLEISSLSSYVLVSMGRDKKALVAAFEYLISGTIGATFYLFGI 178 Query: 183 LLMGRESGSLDFASF--RTLSL-SPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAP 239 L+ +G+L+ + R + L + L F G K + PL WL A+ AP Sbjct: 179 GLLYSMTGTLNMSDMAERIVPLHDNNIIKLGTLFIFIGLSIKMALFPLSRWLVNAYSEAP 238 Query: 240 SHASALMSGVMVKIGIFGILKVAMDLLAQTGL----PLWWGILVMAIGAISALLGVLYAL 295 S S SG + K+ I+ +++ + Q L I+++A+ A+ + G ++A+ Sbjct: 239 SFISIFFSGTVAKVMIYVFIRIFYTVFHQNFFLFKPSLSNVIIILALCAV--IFGSIFAI 296 Query: 296 AEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLL 355 +DIKRLLA S++ +G I+LA LS + G+ A+ H++NH++ K L Sbjct: 297 TAKDIKRLLAHSSISQIGYIILA-------LSFNSK----TGVFAAILHIVNHSIIKTSL 345 Query: 356 FLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLF 415 F+ AG I + T +E + L K MP+TA A + LA+ +P NGF+S+WY +++ Sbjct: 346 FMAAGCISYKFDTTKIENLSGLKKSMPYTALAFTLLSLALIGVPLTNGFVSKWYIMKAI- 404 Query: 416 SLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHA----EEAQEVP 471 +E+ A I++V A LA++ KM + ++ ++ +VP Sbjct: 405 ----IESHAW-----ISLVTFAAGSFLALIYMWKMVEKMYFENDATSRTGMTPDKINDVP 455 Query: 472 NTMIVAMLLLAALCVLIALSAS 493 M+ +L +A L V+ + ++ Sbjct: 456 FPMLFCLLFMAVLTVVTGIYST 477 >UniRef50_C4LLM4 Na(+)/H(+) antiporter subunit n=3 Tax=Corynebacterium RepID=C4LLM4_CORK4 Length = 999 Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 114/420 (27%), Positives = 203/420 (48%), Gaps = 34/420 (8%) Query: 58 VTLVARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFF 117 VT + F P +LR D+LS F L+ + +YS Y+ + G+G+ + Sbjct: 60 VTWIEDFLPNGADVIFSLRADALSTFFALLALGIGAAVFIYSTRYL--HGGRGSMSFYLL 117 Query: 118 MNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVL 177 M F+A++V L++ D+ + +E++SL+S+FL IAR M + G + Sbjct: 118 MTAFMAAVVTLVLADDVILMFISWELVSLASFFL-IARSGPGGELGSMRTIILTFFGGLT 176 Query: 178 IMIAFLLMGRESGSLDFASF---RTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRA 234 ++ + + +G+ + + P L S + +L K+ P H WLP A Sbjct: 177 LLTSLGISAGVTGTTSLSGIIHSPEWAHHPTLLSVIAVLIATSACTKSAQFPFHFWLPEA 236 Query: 235 HPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYA 294 A ++ L + +VK GI+ +L+ + WW L++ +G +A++ L+A Sbjct: 237 MAADTPVSAFLHAAAVVKAGIYLLLRFSALFHDDA----WWRGLLIIVGMFTAIMAALFA 292 Query: 295 LAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGL 354 L + D+K+L A+STV +G I+ +G+ T + + A+ H L HALFK Sbjct: 293 LQKNDLKKLTAYSTVSQLGWIVCTIGIG-----------TPLAMAAAVVHTLAHALFKSS 341 Query: 355 LFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSL 414 LF+ G + + T D+ ++G + ++MPWT + +I +++A+PPL GFIS+ Sbjct: 342 LFMLIGVVDHQTGTRDIRRLGPIWRKMPWTFSMAVIAATSMAAVPPLFGFISKE------ 395 Query: 415 FSLSRVEAVAL-QLAGP-IAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTH-AEEAQEVP 471 ++A+A +LA P A++++ T G A++ F Y F G T + E P Sbjct: 396 ---GMLDAMAEGELATPATALLLICATVG-AILTFAYSYRYVFGGFVDGTRDVSDVHEAP 451 >UniRef50_Q9HJK6 NADH dehydrogenase, chain L related protein n=6 Tax=Thermoplasmatales RepID=Q9HJK6_THEAC Length = 635 Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 122/453 (26%), Positives = 217/453 (47%), Gaps = 60/453 (13%) Query: 72 DLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMN--IFIASMVALL 129 D + +D+L+ M +++S + ++ L+++ YM++ K +F +F A M+ L+ Sbjct: 70 DFGIYIDNLAIVMAMMVSFVSLMIHLFAIYYMKDDPNKHV----YFAETALFTAGMLGLV 125 Query: 130 VMDNAFWFIVLFEMMSLSS------WFL------------VIARQDKTSINAGM--LYFF 169 + N + +E++ L S WF ++ R S GM LY+ Sbjct: 126 ISSNLVLLFLFWELVGLCSYLLIGFWFFKPNATAAAKKAFIVTRVGDLSFIIGMSILYYS 185 Query: 170 IAHAGSVLIMIAFLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGA---KAGMMP 226 + + + I +L+ S ++ R + ++A F GA K+ P Sbjct: 186 LINVTKDPLSIPYLISNASSIAVAIGKVR-----------LGIIAIFILGAAIGKSAQFP 234 Query: 227 LHSWLPRAHPAAPSHASALM-SGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAI 285 LH W+P A P+ SAL+ + MV G++ + ++ L ++ V +G+ Sbjct: 235 LHVWIPDAM-EGPTTVSALIHAATMVTAGVYLVARLFQVFLYAAPFAMY---AVAIVGSF 290 Query: 286 SALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHL 345 +AL + L D+KR+LA+ST+ +G +L A+G+A P++ V + +FHL Sbjct: 291 TALYAGIVGLVVNDVKRILAYSTISQLGYMLAAIGLA--------PIIGGVAVSLGMFHL 342 Query: 346 LNHALFKGLLFLGAGA-IISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGF 404 ++HA+FK LLF+ AGA +++ + D ++MG L KRMP T IG LA+ A P +G+ Sbjct: 343 ISHAIFKALLFMSAGAFLVAMMDLRDAKQMGGLWKRMPVTTTLFFIGSLALVAFPGTSGY 402 Query: 405 ISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHA 464 S+ +F+ +L +AG + ++ L L + +M+ + G PRST A Sbjct: 403 FSK---DPIIFASYNYFTKSLSVAGFLPLLFLMTGSLLTTLYTFRMFFLVAVGKPRSTLA 459 Query: 465 EEAQEVPNTMIVAMLLLAALCVLIALSASWLAP 497 E A++ P IVA+L L L + + W P Sbjct: 460 ERARDPP---IVALLPLMVLSIFALILGVWQVP 489 >UniRef50_B1WQD4 NADH dehydrogenase subunit 5 n=9 Tax=Cyanobacteria RepID=B1WQD4_CYAA5 Length = 682 Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 156/611 (25%), Positives = 264/611 (43%), Gaps = 98/611 (16%) Query: 77 MDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFW 136 +D LSA M ++++ + + +Y+ YM G +++IF ASM+ L++ N Sbjct: 89 LDHLSALMCVIVTTVAFLVMVYTDGYMAH--DPGYVRFYAYLSIFSASMLGLVISPNLVQ 146 Query: 137 FIVLFEMMSLSSWFLVIARQD-KTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFA 195 + +E++ + S+ L+ D K + +A F G +++ L + +G+ +F Sbjct: 147 VYIFWELVGMCSYLLIGFWFDRKAAADACQKAFVTNRVGDFGLLLGMLGIYWATGTFEFD 206 Query: 196 --SFRTLSL------SPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALM- 246 R SL +P LA +L F G AK+ PLH WLP A P+ SAL+ Sbjct: 207 LMGERLESLVSSGMIAPALAGLFAVLVFLGPVAKSAQFPLHVWLPDAM-EGPTPISALIH 265 Query: 247 SGVMVKIGIFGILKV---------AMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAE 297 + MV G+F + ++ AM ++A TG A+++ LG AL + Sbjct: 266 AATMVAAGVFLVARMYPVFEPIPTAMTIIAWTG-------------AVTSFLGATIALTQ 312 Query: 298 QDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFL 357 DIK+ LA+ST+ +G +++A+G+ LFHL+ HA FK +LFL Sbjct: 313 NDIKKGLAYSTISQLGYMVMAMGIG--------------AYTAGLFHLMTHAYFKAMLFL 358 Query: 358 GAGAIISRLH---------THDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEW 408 +G++I + DM MG L K MP T+ A L+G LAI IPP GF S+ Sbjct: 359 CSGSVIHGMEGVVGHDPVLAQDMRLMGGLRKYMPLTSLAFLVGTLAICGIPPFAGFWSK- 417 Query: 409 YTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQ 468 + L+ AL L G T GL +MY +TF G R + Sbjct: 418 ---DEILGLAFEANPALWLVG-------WFTAGLTAFYMFRMYFMTFEGDFRGNDMDIRN 467 Query: 469 EVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQ 528 E+ +M A + + L H H +++P H Sbjct: 468 EL--SMAAAPVFGPGAMDVKELDHD--TEDHGHDDHGHSDSP---------------HES 508 Query: 529 VTPSLLLLLLLAMP--LLPGLYWLWCRSRRAAFRRTGD--AWACGYGWENAMAPSGNGV- 583 L LL+LA+P ++ L W + + G+ A + W +GN V Sbjct: 509 PLTMTLPLLILAIPSTVIGLLGKPWDNTFESFIYAPGEVIEEATHFDWTEFGIMAGNSVG 568 Query: 584 MQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKE 643 + + + ++L L++++DP K A + + ++D+ + + +RLA++ Sbjct: 569 IALIGITIASLMYLQKKIDPKAIAKKYPA--LYQFSLNKWYFDDIYHKVFIMGCRRLARQ 626 Query: 644 IQHLQSGDFRL 654 I + D+R+ Sbjct: 627 IMEV---DYRV 634 >UniRef50_C8SB88 NADH dehydrogenase (Quinone) n=5 Tax=Archaea RepID=C8SB88_FERPL Length = 490 Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 109/344 (31%), Positives = 177/344 (51%), Gaps = 23/344 (6%) Query: 72 DLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVM 131 D + + D+ L S L ++ S+YS+ YMR + FF I + S + Sbjct: 70 DFSFKADAFGTIFALTSSSLWILVSIYSVGYMRALKEHAQTRFYFFFAIALFSAFGIAFS 129 Query: 132 DNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLY--FFIAHAGSVL--IMIAFLLMGR 187 N F V +E++++ ++ LV + + +++AG Y + + G++L MI + L Sbjct: 130 KNLITFYVFYELLTICTYPLVAHEESEEALSAGRRYLAYLLPSGGALLAATMITYFL--- 186 Query: 188 ESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMS 247 +G+ DF + ++ S + +F+L G KA MPLHSWLP A AP+ SAL+ Sbjct: 187 -TGTTDFKAGGFIAGSEAMLKFLFVLFLLG-FVKAAYMPLHSWLPTAM-VAPTPVSALLH 243 Query: 248 GV-MVKIGIFGILKVAMDLL-AQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLA 305 V +VK G+FGI++V + A+ L G ++ A+ + ++ L A+ E ++KR +A Sbjct: 244 AVAVVKAGVFGIIRVVYYVYGAELMSELKLGAILAAVAGFTMIVANLLAIGEDNLKRRIA 303 Query: 306 WSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISR 365 +ST+ + ILL G AM+ +PL GA H+ H K LFL AGAI Sbjct: 304 YSTINQLSFILL--GTAML-----NPL----AFSGAAMHIPFHGYMKITLFLCAGAIAVI 352 Query: 366 LHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWY 409 + ++ L K +P T AA IG + +S IPP+ GF+S+WY Sbjct: 353 SGKDRVSELDGLGKSLPLTFAAFAIGAIGMSGIPPVAGFLSKWY 396 >UniRef50_B5YL25 NADH-ubiquinone/plastoquinone n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YL25_THEYD Length = 589 Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 103/355 (29%), Positives = 176/355 (49%), Gaps = 39/355 (10%) Query: 137 FIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFAS 196 F + +EM+S + L+ +++ K + AG Y + AG + + ++ ++GS F S Sbjct: 118 FYLFWEMLSFCAVLLIWSQRTKEATEAGYRYILVHVAGGLSLFAGIMIYISQTGSFQFDS 177 Query: 197 FRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIF 256 F + S + L GF A + PLH+WLP A+P+A + S ++ K ++ Sbjct: 178 FMSYS-----GELFWWLTLIGFILCAAVPPLHAWLPDAYPSATIYGSVFLNPFTTKAAVY 232 Query: 257 GILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIIL 316 +++ G P +++ +G++ A+ GV+YAL E +++RLL++ V VG ++ Sbjct: 233 ALIR---------GFP--GAEILIYLGSVMAVYGVIYALLENNLRRLLSYHIVSQVGYMV 281 Query: 317 LAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGA 376 VG+ + L GL G+ H NH L+K LLF+ AGA+I M ++G Sbjct: 282 AGVGLGTITL----------GLNGSASHAFNHILYKCLLFMSAGAVIYATGKEKMTELGD 331 Query: 377 LAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVML 436 K P TA + +G +I+ P NGFI + S + + A +L A +ML Sbjct: 332 FGKYAPLTAISFFVGAFSIAGFPLTNGFIGK----------SPIISAAGELKNAFAYIML 381 Query: 437 AV-TGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIAL 490 V T G + KM TF ++ + + +E+P M +AML +ALC+LI + Sbjct: 382 NVATCGTIISIICKMGYYTFFSEKKADY--QVKEIPLNMKIAMLTTSALCILIGI 434 >UniRef50_Q6GBK7 Putative antiporter subunit mnhA2 n=63 Tax=Staphylococcus RepID=MNHA2_STAAS Length = 800 Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 119/402 (29%), Positives = 201/402 (50%), Gaps = 20/402 (4%) Query: 19 LASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLH--AGVTLVARFAPPFEFAD--LT 74 +A + L+ R K +G +LV VI I + Q+ A + ++ P + D L Sbjct: 14 MAMILLMSKRRALAKYAGYIALVAPVISSIYFLIQIPSVAKLQYLSTSIPWIKTLDINLD 73 Query: 75 LRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNA 134 LR+D LS L+ISL+ + Y+ Y+ F++ +F+ SM+ +++ DN Sbjct: 74 LRLDGLSLMFSLIISLIGIAVFFYATQYLSS-RKDNLPRFYFYLTLFMFSMIGIVLSDNT 132 Query: 135 FWFIVLFEMMSLSSWFLVIA-RQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLD 193 + +E+ S+SS+ L+ + S M F I G + +++ F+++ +G+ + Sbjct: 133 ILMYIFWELTSVSSFLLISYWYNNGDSQFGAMQSFMITVFGGLALLVGFIMLYIMTGTNN 192 Query: 194 FASFRTLS---LSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASA-LMSGV 249 + + GL + + G K+ P H WLPRA AAP+ SA L S Sbjct: 193 ITEILGQADHIKNHGLFIPMIFMFLLGAFTKSAQFPFHIWLPRAM-AAPTPVSAYLHSAT 251 Query: 250 MVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTV 309 MVK GIF +L+ L GL + +V +G I+ L G + AL + D+K +LA+ST+ Sbjct: 252 MVKAGIFLLLRFTPLL----GLSNMYVYIVTFVGLITMLFGSITALKQWDLKGILAYSTI 307 Query: 310 ENVGIILLAVGVAMVGLSLH--DPL--LTVVGLLGALFHLLNHALFKGLLFLGAGAIISR 365 +G+I+ VG+ G + H D + + V L GALFHL+NHA+FK LF+G G + Sbjct: 308 SQLGMIMAMVGIGG-GYAQHQQDAIASIYVFVLFGALFHLMNHAIFKCALFMGVGILDHE 366 Query: 366 LHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISE 407 + D+ + + + P I L+++ +P LNGF+S+ Sbjct: 367 AGSRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSK 408 >UniRef50_C0A9K9 NADH dehydrogenase (Quinone) n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A9K9_9BACT Length = 821 Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 126/437 (28%), Positives = 207/437 (47%), Gaps = 32/437 (7%) Query: 72 DLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMR---EYEGKGAAAMGFFMNIFIASMVAL 128 +LT +D LS F LV+S + V+ +LY+ Y+ E+ G+ A ++ +F+ +M+ Sbjct: 71 NLTFLVDGLSLFFALVVSGMGVLVALYAAAYLDDHYEWHGRFYA----YLLLFMGAMLGT 126 Query: 129 LVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFL-LMGR 187 ++ N V +E+ ++S+ L+ DK +G + + L+M+A + L G Sbjct: 127 VLAGNLLLLFVFWELTGIASFLLIGFLHDKEESRSGARMALLVTGLTGLVMLAGVALTGI 186 Query: 188 ESGSLDFASFRTLS------LSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSH 241 +G+ D A+ S GL S F+L G K+ P H WLP A AAP+ Sbjct: 187 AAGTWDLATLLAKGGEAFGPDSRGLLSVAFVLLAVGAMGKSAQFPFHFWLPNAM-AAPTP 245 Query: 242 ASA-LMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDI 300 SA L S MVK+G+F + +V + + L W L++ +G + L L+AL D+ Sbjct: 246 VSAYLHSATMVKLGVFFVARV-FPIFSDADL---WMPLLVTVGFGTMALASLFALLSHDL 301 Query: 301 KRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAG 360 K +LAWSTV +G+ ++G G+ G L H+ +H FKG LF+ AG Sbjct: 302 KAILAWSTVTTLGM--------LIGFYGMGSRTGANGVQGDLLHVASHVFFKGALFMCAG 353 Query: 361 AIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRV 420 I T D+ ++G L +R+PW A I +++ +P GF+S+ Y ++ + Sbjct: 354 IIDHATGTRDVRELGGLRRRLPWLAVVVTICAASMAGVPGTLGFVSKEYFLKAQMAFLAQ 413 Query: 421 EAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVP-NTMIVAML 479 + + LA+T L V ++ F G P + A E P M+V Sbjct: 414 GGGGGWAIYAVGLAWLALT--LKVAFSARLVAHVFWG-PLTPGATEHFHAPARLMLVPPA 470 Query: 480 LLAALCVLIALSASWLA 496 +LA CVL + +WL Sbjct: 471 ILAVACVLFGVWPAWLG 487 >UniRef50_A3DNF9 Membrane bound hydrogenase subunit mbhH n=1 Tax=Staphylothermus marinus F1 RepID=A3DNF9_STAMF Length = 550 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 107/387 (27%), Positives = 202/387 (52%), Gaps = 51/387 (13%) Query: 88 ISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFI---ASMVALLVMDNAFWFIVLFEMM 144 I +L+V+ +YS YMR EG + ++ + + A+M+ ++ + F V+ E++ Sbjct: 96 IDMLIVI--IYSWWYMRSEEG-----VEWYYTLLLLLEAAMIGIVYTGDIFNLFVMIELL 148 Query: 145 SLSSWFLVIARQDK-TSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRTLSLS 203 ++S++ LV +D+ +I A + Y I + + +A + + G+++ A S S Sbjct: 149 AISAYGLVAFHRDRREAIEAAVKYSLIGATATTMFFLAIVFIYGTYGTVNMADLAVKSRS 208 Query: 204 ------------------------PGLASAVFL-LAFFGFGAKAGMMPLHSWLPRAHPAA 238 P LA+A+ + A + F KA + P H WLP AHP A Sbjct: 209 AWICAEAENVCKFFSIMSGNSYGNPILATAIAIAFALWAFTFKAAIFPNHFWLPDAHPEA 268 Query: 239 PSHASALMSGVMVKIGIFGILKVA---------MDLLAQTGLPLWWGIL--VMAIGAISA 287 P+ SA +SG++VK+G + +++ +D+ + +G+ L ++ +M +GAISA Sbjct: 269 PTPVSAALSGLVVKMGAYATVRIMYTVFGINSLIDVPSPSGVSLRDTLMFIIMLLGAISA 328 Query: 288 LLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLN 347 ++G L + + D+KR+LA+ST+ ++G+I + +G + G L+ +L++V ++ H++N Sbjct: 329 IIGSLVMVIQNDVKRILAYSTIAHLGMIFMGIGAGLRG--LNTTVLSLV-IVAVTLHIIN 385 Query: 348 HALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISE 407 H+ K L FL +G I T ++ +M + + P T+ A +I L + +PP GF S+ Sbjct: 386 HSFGKTLAFLSSGIFIKATGTRNILQMRGVGRLTPITSTALIISLLHLLGVPPFGGFFSK 445 Query: 408 WYTWQSL-FSLSRVEAVALQLAGPIAM 433 + +L S V A+ L L+ I+M Sbjct: 446 LLLFNALMMSGQLVFALILILSTAISM 472 >UniRef50_A1AUV3 NADH dehydrogenase (Quinone) n=2 Tax=Pelobacter propionicus DSM 2379 RepID=A1AUV3_PELPD Length = 610 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 126/422 (29%), Positives = 210/422 (49%), Gaps = 35/422 (8%) Query: 75 LRMDSLSAFMVLVISLLVVVCSLYSLTYM--REYEGKGAAAMGFFMNIFIA-SMVALLVM 131 LR+ SAF++ + ++ SLYSL +M R + + F+ + I+ MV V+ Sbjct: 66 LRLYHFSAFILAAAAGFALLVSLYSLHFMARRSHTNQ------FYAYLLISLGMVNGAVL 119 Query: 132 DNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGS 191 + ++ F L + F I S + + F + +L+M+ + G +G+ Sbjct: 120 ADNLILMLFFWEGLLCTIFGFIVIGSGESFRSAIKAFVLIGVSDILMMVGIGMTGFLAGT 179 Query: 192 LDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMV 251 + + LS LA A FLL G +KAG MP HSW+P A AP ALM + Sbjct: 180 MTISRIH-LSPDSALAGAAFLLLVIGATSKAGSMPFHSWIPDAAVDAPLPFMALMPAALE 238 Query: 252 KI-GIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVE 310 K+ GI+ + ++ +DL A + W L+M +G ++ LL V+ AL ++D KRLL++ + Sbjct: 239 KLLGIYFLSRITLDLFALSPAS-WLSPLLMTLGVVTILLAVMMALIQKDYKRLLSYHAIS 297 Query: 311 NVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHD 370 VG ++L +G A+ VG++G +FH++NHA++K LFL +G++ ++ T D Sbjct: 298 QVGYMILGIGTAVP-----------VGIVGGIFHMINHAMYKSCLFLTSGSVEAQTGTTD 346 Query: 371 MEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGP 430 ++K+G + RMP T +I AIS +PP NGF S + L +E + AG Sbjct: 347 LKKLGGMGMRMPITFICFIIAAAAISGVPPFNGFFS-----KELIYDGALERHWIFYAGA 401 Query: 431 IAMVMLAVTGGLAVMCFVKMYGITFCG-APRSTHAEEAQEVPNTMIVAMLLLAALCVLIA 489 +A L F+K+ F G A +E P +M++ M+ +A CVL Sbjct: 402 LAGSFLTAA------SFLKLGHAVFLGKAEDEASFSLVREAPLSMLIPMVTIAGGCVLFG 455 Query: 490 LS 491 ++ Sbjct: 456 VA 457 >UniRef50_C6W0W0 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W0W0_DYAFD Length = 658 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 124/451 (27%), Positives = 204/451 (45%), Gaps = 56/451 (12%) Query: 64 FAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIA 123 FA + DL+LR D+LS M++++ + ++ LYS YM + + F+ +F+ Sbjct: 71 FAVGERYIDLSLRFDTLSTLMLVIVHFVALLVQLYSTAYM--HADRNVNRYFAFIQLFLF 128 Query: 124 SMVALLVMDNAFWFIVLFEMMSLSSWFLV-IARQDKTSINAGMLYFFIAHAGSVLIMIAF 182 SM+ +++ N + +E++ LSS+ L+ K + A F + G + Sbjct: 129 SMLGIVLASNLLMMYIFWELVGLSSYLLIGFWYTKKRPVWAAQKAFVLNRIGDAAFLTGI 188 Query: 183 LLMGRESGSLDFA--SFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPS 240 L++ G D + ++ G+ + + + F G K+ PL WLP A P+ Sbjct: 189 LMLFYYVGVTDLEVLALEIGTIPQGILTVIGICLFGGCVGKSAQFPLSGWLPDAM-EGPT 247 Query: 241 HASALM-SGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQD 299 SAL+ + MV GIF + +++ L L +++ IGAI+ ++G + AL D Sbjct: 248 PVSALIHAATMVAAGIFLLARISFLLTVDARL------VILVIGAITMVIGAVKALNGWD 301 Query: 300 IKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGA 359 IK++LA+ST+ +G++++AVG A+FHL HA FK LFL A Sbjct: 302 IKKVLAYSTMSQLGLMVMAVGFG--------------SWQTAMFHLATHAFFKAGLFLSA 347 Query: 360 GAIISRLHTH-------------DMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGF-- 404 G++I + H DM MG L K +P T I A++ +P +GF Sbjct: 348 GSVIHAVTPHEEHTGAEPQFDPQDMRTMGGLRKALPITFICFSICAAALAGLPFFSGFLS 407 Query: 405 ----ISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPR 460 I+E + W S F AL P+ +V+ + GL + + F G R Sbjct: 408 KDAIITEGFLWASEFG-------ALGYLFPVLVVL---SAGLTAFYMTRQVWLIFFGNER 457 Query: 461 STHAEEAQEVPNTMIVAMLLLAALCVLIALS 491 A E P M + M LL+AL V S Sbjct: 458 FPAAVHPHESPVAMWLPMALLSALSVFCWFS 488 >UniRef50_A9B485 Proton-translocating NADH-quinone oxidoreductase, chain L n=6 Tax=Chloroflexi (class) RepID=A9B485_HERA2 Length = 736 Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 118/369 (31%), Positives = 178/369 (48%), Gaps = 51/369 (13%) Query: 70 FADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYE---GKGAAAMGF-FMNIFIASM 125 F R+D + M+ +++L L+S+ YM E G + F ++ +F ASM Sbjct: 109 FFKFGYRLDGATVLMLAMVTLAAWCIHLFSVGYMAHDEFPTGHQRQSRFFSYIALFTASM 168 Query: 126 VALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSI-NAGMLYFFIAHAGSVLIMIAFLL 184 + + + DN F + +E+M L S+ L+ K S A F G V +M+ + Sbjct: 169 LGMTLADNLLLFFICWELMGLCSFLLIGFWFFKPSAREAAKKAFITTRIGDVGMMLGMMY 228 Query: 185 MGRESGSLDFA-------------SFRT-LSLSPGLASAVFL--LAFFGFGAKAGMMPLH 228 + ++GSL F S +T SL PG+++A + L F G K+ PLH Sbjct: 229 IYNKAGSLTFGHEPGQIYNGEFLESIKTATSLIPGISAASLMAGLVFLGTVGKSAQFPLH 288 Query: 229 SWLPRAHPAAPSHASALM-SGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISA 287 WLP A P+ SAL+ + MV G+F +++ LP+ V IGA +A Sbjct: 289 VWLPDAM-EGPTPVSALIHAATMVAAGVFLVIRTFPIFAVSEVLPV-----VAFIGAFTA 342 Query: 288 LLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLN 347 L L A+A+ DIKR+LA+ST+ +G ++ A+G+ + ALFHLL Sbjct: 343 LFAALIAVAQYDIKRILAFSTLSQLGFMVAALGIG--------------AWVAALFHLLT 388 Query: 348 HALFKGLLFLGAGAIISRLHT---HDMEK------MGALAKRMPWTAAACLIGCLAISAI 398 HA FK LLFLG+G++I + HD +K MG L K MP T + G A+ I Sbjct: 389 HAFFKALLFLGSGSVIHGMEATVGHDPDKAQDIRNMGTLRKFMPITFLTYMAGFFALIGI 448 Query: 399 PPLNGFISE 407 PP GF S+ Sbjct: 449 PPFAGFWSK 457 >UniRef50_A4XV13 Proton-translocating NADH-quinone oxidoreductase, chain M n=10 Tax=Proteobacteria RepID=A4XV13_PSEMY Length = 509 Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 96/346 (27%), Positives = 166/346 (47%), Gaps = 32/346 (9%) Query: 75 LRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNI--FIASMVALLVMD 132 L MD LS MV++ LL V+ L S ++ G F +N+ + +V + + Sbjct: 82 LAMDGLSVLMVVLTGLLGVLSVLCSWNEIQHRVGF------FHLNLMWILGGVVGVFLAV 135 Query: 133 NAFWFIVLFEMMSLSSWFLVI-----ARQDKTSINAGMLYFFIAHAGSVLIMIAFLLM-- 185 + F F +EMM + +FL+ +T I A +F A +++++A L + Sbjct: 136 DLFLFFFFWEMMLVPMYFLIALWGHSGSDGRTRITAATKFFIFTQASGLIMLVAILALVL 195 Query: 186 --GRESG--SLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSH 241 ++G + ++A L+PG + L F F K ++P+HSWLP AH AP+ Sbjct: 196 VHFNQTGVLTFNYADLLQTELAPGTEYLLMLGFFIAFAVKFPVVPVHSWLPDAHAQAPTA 255 Query: 242 ASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIK 301 S ++G+++K +G+L+ A+ L + +G + + G L + A+ DIK Sbjct: 256 GSVDLAGILLKTAAYGLLRFALPLFPNASAEF--APIAQWLGVFAIIYGALLSFAQTDIK 313 Query: 302 RLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGA 361 RL+A+S+V ++G +L+A+ + + L GA+ ++ H L LF+ G Sbjct: 314 RLVAYSSVSHMGFVLIAIYSG-----------SQIALQGAVVQMVAHGLSAAALFILCGQ 362 Query: 362 IISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISE 407 + RLHT D+ +MG + RMPW A L A +P F+ E Sbjct: 363 LYERLHTRDLRQMGGIWARMPWLPAISLFFAAAALGLPGTGNFVGE 408 >UniRef50_Q35099 NADH-ubiquinone oxidoreductase chain 5 n=58 Tax=Metazoa RepID=NU5M_METSE Length = 600 Score = 132 bits (333), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 104/341 (30%), Positives = 179/341 (52%), Gaps = 32/341 (9%) Query: 75 LRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMN---IFIASMVALLVM 131 L+ DSL+A M++V++ + + ++S YM G + FM+ +F M+ L+ Sbjct: 76 LQFDSLTAVMLIVVTSISTLVHIFSTAYM-----DGDPHVPRFMSYLSLFTFFMILLVTS 130 Query: 132 DNAFWFIVLFEMMSLSSWFLVIARQDKTSIN-AGMLYFFIAHAGSVLIMIAFLLMGRESG 190 DN + +E + L S+ L+ + N A + + G + ++A L + + G Sbjct: 131 DNYPQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGFVLAMLAIWDQFG 190 Query: 191 SLDFAS-FRTLSLSPGLASA-VFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALM-S 247 LDFAS F ++L+P + + L F G K+ + LH+WLP A P+ SAL+ + Sbjct: 191 CLDFASVFNIVALAPSDNTTLICLFLFIGAVGKSAQLGLHTWLPDAMEG-PTPVSALIHA 249 Query: 248 GVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWS 307 MV G+F +++ + LL Q + L ++V +G+++A + L + D+K+++A+S Sbjct: 250 ATMVTAGVFLLIR-SSPLLEQAPMAL---MVVTIVGSLTAFMAATIGLVQNDLKKVIAYS 305 Query: 308 TVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRL- 366 T +G +++A G++ +SL FHL+NHA FK LLFL AG++I L Sbjct: 306 TCSQLGYMVMACGLSQYSISL--------------FHLMNHAFFKALLFLSAGSVIHALA 351 Query: 367 HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISE 407 DM KMG L + +P+T +IG L++ P L GF S+ Sbjct: 352 DEQDMRKMGGLIRSIPFTYTMIVIGSLSLMGFPYLTGFYSK 392 >UniRef50_C7R7H2 Proton-translocating NADH-quinone oxidoreductase, chain L n=4 Tax=Gammaproteobacteria RepID=C7R7H2_KANKD Length = 672 Score = 132 bits (333), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 136/490 (27%), Positives = 225/490 (45%), Gaps = 89/490 (18%) Query: 69 EFADLTLRM----DSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIAS 124 F+DLT+++ DSLSA M++V++ + ++ +YS+ YM ++ G ++++F S Sbjct: 72 SFSDLTIQIGFMIDSLSALMMVVVTFVSLMVHIYSIGYM--HDDDGYQRFFSYLSLFTFS 129 Query: 125 MVALLVMDNAFWFIVLFEMMSLSSWFLV-IARQDKTSINAGMLYFFIAHAGSVLIMIA-- 181 M+ L++ +N +E + L S+ L+ Q +++I A M F + G ++ Sbjct: 130 MLMLVMANNFLQLFFGWEAVGLVSYLLIGFWYQKESAIFANMKAFLVNRVGDFGFILGIG 189 Query: 182 --FLLMGRESGSLDFA---------------SFRTLSLSPGLASA--------------- 209 FLL G + D+A S R+ + GL S Sbjct: 190 AIFLLFG----TFDYAPIFKSMGQAEEIMQISERSAENALGLMSLDGSFVAWGDTSWPII 245 Query: 210 --VFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALM-SGVMVKIGIFGILKVA-MDL 265 + + F G K+ +PLH WLP + P+ SAL+ + MV G+F + +++ + Sbjct: 246 TFICICLFIGAMGKSAQVPLHVWLPDSMEG-PTPISALIHAATMVTAGVFMVARMSPLFE 304 Query: 266 LAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVG 325 ++T L + V IGAI+AL L A+ + DIKR++A+ST+ +G +++A+GV+ Sbjct: 305 FSETALTM-----VTIIGAITALFMGLVAIVQNDIKRIIAYSTLSQLGYMVVALGVSAYS 359 Query: 326 LSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRL-HTHDMEKMGALAKRMPWT 384 A+FHL HA FK LLFLGAG++I L H ++ KMG L KR+P T Sbjct: 360 --------------AAIFHLFTHAFFKALLFLGAGSVIVALHHEQNIRKMGGLYKRLPLT 405 Query: 385 AAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIA-MVMLAVTGGLA 443 L+G LA+ P GF S+ + A + GP A AV G+ Sbjct: 406 YWTTLVGTLALIGTPFFAGFYSK----------DAIIMAASEAQGPAASFAYFAVMAGVV 455 Query: 444 VMCF--VKMYGITFCGAP--RSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKI 499 V ++M + F G H + E P + ++ LA ++I W K Sbjct: 456 VTALYSMRMLLVVFHGKSSLDEQHLNQLTESPRVITWPLIALAVPSLIIG----WFMTKP 511 Query: 500 MHIAHAFTNT 509 M F + Sbjct: 512 MLDGDYFAES 521 >UniRef50_A4X1Y8 Proton-translocating NADH-quinone oxidoreductase, chain L n=4 Tax=Micromonosporaceae RepID=A4X1Y8_SALTO Length = 649 Score = 132 bits (333), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 145/463 (31%), Positives = 219/463 (47%), Gaps = 68/463 (14%) Query: 69 EFADLTL----RMDSLSAFMVLVISLLVVVCSLYSLTYMR---------EYEGKGAAAMG 115 +F LT+ R+DS A + + ++ + + +YS+ Y+R ++ AA Sbjct: 77 DFGGLTVTLGVRLDSTVALVAVAVAAVALAVQVYSVGYLRSGPHDEVDVDHRYPPYAAQ- 135 Query: 116 FFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVI-ARQDKTSINAGMLYFFIAHAG 174 +++F A+M+ ++V + +V +E+M L S+ L+ R+ + A M F + G Sbjct: 136 --ISLFTAAMLLVVVAGDLILLLVGWEVMGLCSYLLIAHERRLPAAPAAAMKAFLVTRVG 193 Query: 175 SVLIMIAFLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRA 234 V ++ L+G +GS A + GL +A LL G K+ PLH+WLP A Sbjct: 194 DVGFLLGIALLGVSAGSFRIADVLGHDHATGLLTAACLLLLAGVAGKSAQFPLHTWLPDA 253 Query: 235 HPAAPSHASALM-SGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLY 293 A P+ SAL+ + MV G++ + ++ L Q + L ++ + +I+ LLG Sbjct: 254 M-AGPTPISALIHAATMVAAGVYVVARL-FPLFVQVPVAL---AVLGVLASITLLLGAFA 308 Query: 294 ALAEQDIKRLLAWSTVENVGIIL--LAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALF 351 A+A+ D+KR+LAWSTV +G + LAVG ALFHLL HA F Sbjct: 309 AIAQDDLKRVLAWSTVSQLGYLTGALAVGAPTA----------------ALFHLLTHAAF 352 Query: 352 KGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTW 411 K LLFL AGA+I T M ++G L + MP T + LIG A++ +PPL+GF S+ Sbjct: 353 KALLFLAAGAVIHAAGTALMSQLGGLRRTMPVTFWSMLIGLGALAGLPPLSGFFSKDAV- 411 Query: 412 QSLFSLSRVEAVALQLAGPIAM-----VMLAVTGGLAVMCFVKMYGI-----TFCGAPRS 461 L E AL GP V LA GLA + Y TF GAPRS Sbjct: 412 -----LYAAEEAALH-GGPAPTWVGWSVWLA---GLAGVTLTAGYATRLLLRTFFGAPRS 462 Query: 462 THAEEAQEVPNTMIVAMLLLAALCVLIALS------ASWLAPK 498 + + P M +LLL L+ L+ A WL P Sbjct: 463 P-LRQPHDPPAVMRWPVLLLTVPAALLGLAGFSGAFAGWLEPS 504 >UniRef50_C8XH11 NADH/Ubiquinone/plastoquinone (Complex I) n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XH11_NAKMY Length = 956 Score = 132 bits (332), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 122/455 (26%), Positives = 217/455 (47%), Gaps = 29/455 (6%) Query: 63 RFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFI 122 R+ P + A + LRMD+L+ + L+I+ + ++ LYS Y + G + + F Sbjct: 69 RWVPALDLA-IDLRMDALAMALTLIIAFIGMLVLLYSARYF-PADDDGLSKYSGSLVAFA 126 Query: 123 ASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQ-DKTSINAGMLYFFIAHAGSVLIMIA 181 +M+ L+ +N +V +E+ + S+ L+ R K+S A + AG ++++I Sbjct: 127 GAMLGLVWANNLILLVVCWELTGILSYLLIAHRAGKKSSRTAASQALMVTTAGGLVMLIG 186 Query: 182 FLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSH 241 +++G +G+ + S L + LL G +K+ ++P WLP A AAP+ Sbjct: 187 AVMLGTLAGTFTISEILAAPPSGPLVTVSVLLLIVGGISKSAIVPFQFWLPGAM-AAPTP 245 Query: 242 ASA-LMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDI 300 ASA L + MVK GI+ L++A A LP+W +L+ A+G + L G + AL ++D+ Sbjct: 246 ASAYLHAATMVKAGIYLFLRLAP---AFATLPVWQPVLI-ALGGGTMLFGAVLALRQRDL 301 Query: 301 KRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAG 360 K LLA+ TV +G++ L +G +P LLG L L+ HA FK LF G Sbjct: 302 KLLLAYGTVSQLGLMTLVIGTG-------NP----DALLGGLAMLIAHATFKAPLFFTVG 350 Query: 361 AIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRV 420 I + T D+ K+ L +RMP A ++ L+++ IPP+ GF ++ + L Sbjct: 351 IIDTTTGTRDLTKLSGLGRRMPLLATLAVLSALSMAGIPPMLGFAAKEADYAGLLEGGT- 409 Query: 421 EAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLL 480 G +A+V++A+ + + F A + A + M+ + Sbjct: 410 -------GGYVAVVVMALGSAITTAYSARFIWGAFA-AKKDVPAADPAPTSAFMVGPTMA 461 Query: 481 LAALCVLIALSASWLAPKIMHIAHAFTNTPPATVA 515 + A+ +++ ++ L P + A T P +A Sbjct: 462 MVAIGLVLGIAPGLLEPLLQSYAQTAGPTHPGAMA 496 >UniRef50_B8FRJ9 Proton-translocating NADH-quinone oxidoreductase, chain L n=11 Tax=Firmicutes RepID=B8FRJ9_DESHD Length = 651 Score = 132 bits (332), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 127/432 (29%), Positives = 202/432 (46%), Gaps = 49/432 (11%) Query: 72 DLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVM 131 D +D +SA M+ V++L+ + +YS+ YM + G + F ++F ASM+ +++ Sbjct: 86 DFGTLIDPMSAMMLFVVTLVASMVQIYSIGYM--HGDPGFSRYYAFQSLFAASMLGMVLA 143 Query: 132 DNAFWFIVLFEMMSLSSWFLVIARQDKTSI-NAGMLYFFIAHAGSVLIMIAFLLMGRESG 190 N + +E++ L S+ L+ K S A F G +++ L + G Sbjct: 144 TNLLQLFIFWELVGLCSYLLIGFWFFKVSAREAAKKAFITTRVGDFGLLLGILFLYNTFG 203 Query: 191 SLDF-----------ASFRTLSLSPGLA--SAVFLLAFFGFGAKAGMMPLHSWLPRAHPA 237 +LDF SF +L G++ + + +L F G K+G PLH WLP A Sbjct: 204 TLDFYGPGSLSVQMATSFHDFALIGGVSYLTIMAILVFIGPVGKSGQFPLHVWLPDAMEG 263 Query: 238 APSHASALM-SGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALA 296 P+ SAL+ + MV G++ L M L P LV +GA +A+ A+A Sbjct: 264 -PTPVSALIHAATMVVAGVY--LVARMFFLFDNASPFALQ-LVAGMGAFTAIFAATIAIA 319 Query: 297 EQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLF 356 + DIKR+LA+ST+ +G ++ A+GV L ++FHL+ HA FK L+F Sbjct: 320 QDDIKRILAYSTLSQLGYMMFALGVG--------------SLTASMFHLMTHAFFKALMF 365 Query: 357 LGAGAIISRL-HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLF 415 LGAG++I L H ++ MG L K+MP T IG LAI+ IPP GF F Sbjct: 366 LGAGSVIHALHHKQNIWDMGGLWKKMPITGTTFFIGVLAIAGIPPFAGF----------F 415 Query: 416 SLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMI 475 S + A PI + T L +++ + F G + + E P M Sbjct: 416 SKDEILLAAYH-GHPIIFAVGLFTAFLTAFYMSRLFFVAFMGEEKPEN--HPHESPWVMT 472 Query: 476 VAMLLLAALCVL 487 + +++LA V+ Sbjct: 473 LPLIILAFFSVV 484 >UniRef50_B5YKJ0 NADH-quinone oxidoreductase chain l n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YKJ0_THEYD Length = 630 Score = 132 bits (332), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 162/676 (23%), Positives = 294/676 (43%), Gaps = 122/676 (18%) Query: 35 SGITSLVGGVIGIISGITQLHAGVTLVARFAPPFEFADLTLR----MDSLSAFMVLVISL 90 +G+ S++G ++ + I Q+ +G T+ DL + +D L+A M+ V+ Sbjct: 34 AGVLSILGSLVVALFAIAQVFSGKTIEYNIYTWILSDDLKVSFGYLIDQLTAVMLFVVCF 93 Query: 91 LVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWF 150 + + +YS+ YM + G ++N+F+ SM+ L++ +N +E + L S+F Sbjct: 94 VGWLIHIYSVGYM--HGDPGYPRYFAYLNLFVFSMLMLVMGNNLVMLYFGWEAVGLCSYF 151 Query: 151 LV-IARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASF---------RTL 200 L+ KT+ +AG F + G + L+ +L++ TL Sbjct: 152 LIGFWYHKKTASDAGKKAFIVNRIGDFGFALGIFLLFINVYALNYTDIFPKIPGLQGHTL 211 Query: 201 SL---SPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALM-SGVMVKIGIF 256 ++ + L + + LL F G K+ +PLH WLP A P+ SAL+ + MV G+F Sbjct: 212 NIFGWNIDLITLIALLLFCGAVGKSAQIPLHVWLPDAM-EGPTPVSALIHAATMVTAGVF 270 Query: 257 ---------GILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWS 307 G+ ++A+ ++A TG A+++ AL ++D+KR++A+S Sbjct: 271 MVARLNPIYGMSEIALAVVAITG-------------AVTSFFAATIALVQRDMKRIIAYS 317 Query: 308 TVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLH 367 T+ +G + + G+A G +FHL HA FK LLF+GAG+++ + Sbjct: 318 TISQIGYMFIGCGMAAYG--------------AGIFHLYTHAFFKALLFMGAGSVMHAMA 363 Query: 368 TH-DMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQ 426 D+ KMG L K+MP T LI L I+ IP +GF S+ + F+ ++ + Sbjct: 364 GELDIYKMGGLRKKMPITYITFLIASLTIAGIPGFSGFFSKDEILWAAFASAKPYGKFIW 423 Query: 427 LAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAE--EAQEVPNTMIVAMLLLAAL 484 L G I T L ++ + F G R T E E P M V +++LA Sbjct: 424 LLGTI-------TAALTAFYTFRILFVAFHGKFRGTPEEFKHVHESPPIMTVPLIVLAIG 476 Query: 485 CVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLL 544 V++ I H P V + P H Q +++ M ++ Sbjct: 477 SVIVGY---------FSIPHFLEPVIPKPVFAA----P---HEQER------VVMTMSII 514 Query: 545 PGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPL------RVVFSALFRLR 598 G+ + + T A +A + +GV + L ++S LF Sbjct: 515 AGVTGILIAGYIYIVKSTVSA---------RLAKTFSGVYKVLWNKYYVDELYSFLF--- 562 Query: 599 QQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKE----IQHLQSGDFRL 654 + PTL + + + E F D ++I IV+ +L + I+ +Q+G + Sbjct: 563 --VKPTLWIAE---------KFIERFADIKIIEGIVNGIPKLIYKTGLLIRPIQTGQLQQ 611 Query: 655 YCLYVVAALVVLLIAI 670 Y ++++A +++ ++ I Sbjct: 612 YAIFMIAGIIIFVLII 627 >UniRef50_Q1NS07 NADH dehydrogenase (Quinone) n=2 Tax=delta proteobacterium MLMS-1 RepID=Q1NS07_9DELT Length = 475 Score = 132 bits (332), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 112/321 (34%), Positives = 174/321 (54%), Gaps = 25/321 (7%) Query: 97 LYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVM--DNAFWFIVLFEMMSLSSWFLVIA 154 L +L Y R Y G A +++ + ++ +AL V N +V +E++S+ ++ LV+ Sbjct: 76 LLALIYSRGYLGA-AHRERYYLVLMLSLPLALGVAWAGNLLTLLVFYELLSVLAYLLVVH 134 Query: 155 RQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRTLS--LSPGLASAVFL 212 + T+ A Y G I++ +L+ G L FA+ L L G + +F+ Sbjct: 135 EETITAKAAAAKYIVYVLVGGSCILLGVVLVFHLVGGLGFAAGPMLDAGLGRGYLTVIFV 194 Query: 213 LAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKV-----AMDLLA 267 GFG KA ++PLH W+P AHPAAP+ SAL+SG++V G FGI++V ++LL Sbjct: 195 ALLAGFGVKAALVPLHGWVPDAHPAAPAPFSALLSGILVATGAFGIIRVTHQVFGVELLR 254 Query: 268 QTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLS 327 + GL W V + AI L + A + D+KR LA+ST+ +G I LA+ +++G Sbjct: 255 ELGLMNW----VAPLAAIGVLAAAVAAARQDDLKRRLAYSTISQLGYITLAI--SLLGQE 308 Query: 328 LHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAA 387 L L+GAL H+ NHA+ K LF AG ++ R + +M LA+R+PWT AA Sbjct: 309 L---------LVGALLHISNHAMMKATLFFCAGLLLRRAGVRRLSEMAGLARRLPWTMAA 359 Query: 388 CLIGCLAISAIPPLNGFISEW 408 + L + +PPL GFIS+W Sbjct: 360 FTLAALGMIGVPPLAGFISKW 380 >UniRef50_Q0ARA4 NADH dehydrogenase (Quinone) n=3 Tax=Hyphomonadaceae RepID=Q0ARA4_MARMM Length = 507 Score = 132 bits (331), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 97/356 (27%), Positives = 174/356 (48%), Gaps = 28/356 (7%) Query: 65 APPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREY--EGKGAAAMGFFMNIFI 122 APP + R+D L+ ++LV+ ++ +C +Y+L + + E K A F+ F Sbjct: 76 APPL---GIEYRVDMLNIPLLLVVGIVGFLCVIYALPSVADEIAENKQALFYSAFLVCF- 131 Query: 123 ASMVALLVMDNAFWFIVLFEMMSLSSWFLVI--ARQDKTSINAGMLYFFIAHAGSVLIMI 180 A ++ + + +AF V E+ S+S++ ++ A +D+ ++ A Y + G+ +I Sbjct: 132 AGLLGVTITGDAFNVFVFLEISSISTYVIIAMGAGKDRRALTASYNYLILGTIGATFFVI 191 Query: 181 AFLLMGRESGSLDFASFRTLSLSPG---LASAVFLLAFFGFGAKAGMMPLHSWLPRAHPA 237 + +G+L+ A + G + A F G G KA M PLH WLP A+ Sbjct: 192 GVGFLYMATGTLNMADMAAILEETGHNRVTQAAFAFIVVGLGLKAAMFPLHLWLPNAYAF 251 Query: 238 APSHASALMSGVMVKIGIFGILKVAMDL----LAQTGLPLWWGILVMAIGAISALLGVLY 293 AP+ +A ++ K+ + +++ + ++ + W L +G I+ ++ L Sbjct: 252 APNFVTAFLASTATKVAFYALIRFLFSVFHPDVSFVSMSFTW--LFAVVGTIAMVVASLQ 309 Query: 294 ALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKG 353 A+ + D +RLLA+S+V VG ++L +G+ T GL L HL+NHAL KG Sbjct: 310 AVFQTDARRLLAYSSVAQVGYMMLGLGMG-----------TASGLSAGLLHLMNHALMKG 358 Query: 354 LLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWY 409 LF+ GA ++ + ++K MP +A A I L++ +P GF S+WY Sbjct: 359 ALFMALGAFALNFGVRRVKDLAGMSKTMPASATAFTIAGLSLVGVPLTVGFTSKWY 414 >UniRef50_Q1RKE5 NADH-quinone oxidoreductase subunit M n=17 Tax=Rickettsieae RepID=NUOM_RICBR Length = 494 Score = 132 bits (331), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 95/354 (26%), Positives = 177/354 (50%), Gaps = 22/354 (6%) Query: 77 MDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFW 136 +D +S F V + S L ++C + SL +++Y + + I + ++ N Sbjct: 86 IDGISIFFVSLTSFLTLICIIGSLFTVKKYIKEYLVCFLLMESFCIGAFTSI----NLLV 141 Query: 137 FIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFAS 196 F + FE++ + + ++ + I A + +F GSV +++ + + + S D ++ Sbjct: 142 FYLFFEVILVPMYIIIGVWGGENRIYAAVKFFLYTFFGSVFFLLSIIYIYSKIHSFDLSN 201 Query: 197 FRTLSLSPGLASAVFL--LAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIG 254 + + L L F F K M+P H+WLP AH AP+ S +++G+++K+G Sbjct: 202 IGEFTNNFPLHVQQILWWAIFIAFAIKIPMIPFHTWLPDAHVQAPTSGSVILAGILLKLG 261 Query: 255 IFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGI 314 +G L+V + LL + I V+ + I+ + L ALA++D+K+++A+S++ ++G Sbjct: 262 GYGFLRVLLPLLPNASQE--FAIYVIWLSVIAIIYASLVALAQKDMKKMIAYSSITHMGY 319 Query: 315 ILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKM 374 + + + S D G+ GALF +L+H + LFL G + RLHT ++ K Sbjct: 320 VTIGI------FSFTDS-----GVSGALFQMLSHGIISSCLFLIVGTLYERLHTKEIAKY 368 Query: 375 GALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLA 428 G +A +MP A +I L +P +GFI E + SL + +V +A LA Sbjct: 369 GGVASKMPVLATFFMIAMLGSVGLPGTSGFIGE---FLSLLGIYKVNVIATFLA 419 >UniRef50_Q55429 NAD(P)H-quinone oxidoreductase chain 5 n=19 Tax=cellular organisms RepID=NU5C_SYNY3 Length = 681 Score = 131 bits (330), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 155/630 (24%), Positives = 268/630 (42%), Gaps = 97/630 (15%) Query: 53 QLHAGVTLVARFAPPFEFA-DLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGA 111 Q HA + +A F ++ +D LSA M+++++ + ++ +Y+ YM G Sbjct: 64 QGHASYAQMIEWASAGSFHLEMGYVIDHLSALMLVIVTSVALLVMIYTDGYMAH--DPGY 121 Query: 112 AAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQD-KTSINAGMLYFFI 170 ++++F +SM+ L++ N + +E++ + S+ L+ D K + +A F Sbjct: 122 VRFYAYLSLFASSMLGLVISPNLVQVYIFWELVGMCSYLLIGFWYDRKAAADACQKAFVT 181 Query: 171 AHAGSVLIMIAFLLMGRESGSLDFASF--------RTLSLSPGLASAVFLLAFFGFGAKA 222 G +++ L + +GS DF + + LS +A+ + +L F G AK+ Sbjct: 182 NRVGDFGLLLGILGLYWATGSFDFGTIGERLEGLVSSGVLSGAIAAILAILVFLGPVAKS 241 Query: 223 GMMPLHSWLPRAHPAAPSHASALM-SGVMVKIGIFGILK---------VAMDLLAQTGLP 272 PLH WLP A P+ SAL+ + MV G+F + + V M+ +A TG Sbjct: 242 AQFPLHVWLPDAM-EGPTPISALIHAATMVAAGVFLVARMYPVFEPIPVVMNTIAFTG-- 298 Query: 273 LWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPL 332 +A LG AL + DIK+ LA+ST+ +G +++A+G+ Sbjct: 299 -----------CFTAFLGATIALTQNDIKKGLAYSTISQLGYMVMAMGIGAYS------- 340 Query: 333 LTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLH---------THDMEKMGALAKRMPW 383 LFHL+ HA FK +LFL +G++I + DM MG L K MP Sbjct: 341 -------AGLFHLMTHAYFKAMLFLCSGSVIHGMEGVVGHDPILAQDMRIMGGLRKYMPI 393 Query: 384 TAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLA 443 TA LIG LAI IPP GF S+ + +A Q A P+ + T G+ Sbjct: 394 TATCFLIGTLAICGIPPFAGFWSK----------DEILGLAFQ-ANPLLWFVGWATAGMT 442 Query: 444 VMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIA 503 +MY +TF G R QE + ++ LL A++ L + H Sbjct: 443 AFYMFRMYFMTFEGGFRGND----QEAKDGVLQFYGLLPNFGPG-AMNVKELDHEAGHDD 497 Query: 504 HAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMP-LLPGLYWL-WCRSRRAAFRR 561 H ++ P H L+ LA+P +L GL W A Sbjct: 498 HGHSSEP---------------HESPLTMTFPLMALAVPSVLIGLLGRPWANQFEAFIHA 542 Query: 562 TGD--AWACGYGWENAMAPSGNGV-MQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARA 618 G+ A + W +GN + + + + ++L + + DP + K + + Sbjct: 543 PGEVVEHAAEFEWGEFYVMAGNSIGIALIGITVASLMYWQHKFDPKVLAEKFPS--LYQL 600 Query: 619 QSTEPFWDERVIRPIVSATQRLAKEIQHLQ 648 + ++D+ + V ++R+A++I + Sbjct: 601 SLNKWYFDDLYDKLFVQGSRRVARQIMEVD 630 >UniRef50_D0LZ05 Proton-translocating NADH-quinone oxidoreductase, chain L n=6 Tax=cellular organisms RepID=D0LZ05_HALO1 Length = 801 Score = 131 bits (330), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 136/459 (29%), Positives = 222/459 (48%), Gaps = 52/459 (11%) Query: 72 DLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVM 131 DL R+D+LS+ M+LVI+ + + +YS+ YM E+E + AA G+ +N+F SM+ L++ Sbjct: 102 DLAFRVDTLSSVMLLVITFIGSLIHIYSIGYM-EHEPRYAAYFGY-LNLFTGSMLILVLG 159 Query: 132 DNAFWFIVLFEMMSLSSWFLVIARQDKT-SINAGMLYFFIAHAGSVLIMIAFLLMGRESG 190 D+ + +E + L S+ L+ ++T + +AG F + G +I L+ + G Sbjct: 160 DSLPVMFIGWEGVGLCSYLLIGFWFNETANADAGRKAFVVNRVGDFSFLIGMFLLFQMVG 219 Query: 191 SLDFASFRTLSLSPGLASAVF----------LLAFFGFGAKAGMMPLHSWLPRAHPAAPS 240 LD+ R+ + +A + L F G K+ +PL+ WLP A A P+ Sbjct: 220 GLDYEVLRSDTAMSIYDNAFWGGERIAFWAGLFLFIGACGKSAQIPLYVWLPDAM-AGPT 278 Query: 241 HASALM-SGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQD 299 SAL+ + MV G++ + +++ L A + + I+V +GA++AL A A+ D Sbjct: 279 PVSALIHAATMVTAGVYMVARLSF-LYASSTTAM---IIVSTVGALTALAAAFMAFAQTD 334 Query: 300 IKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGA 359 K++LA+STV +G + + VGV + +FHL+ HA FK LFL A Sbjct: 335 FKKVLAYSTVSQLGFMFVGVGVG--------------AYVAGVFHLITHAFFKAGLFLSA 380 Query: 360 GAIISRLH-THDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLS 418 G+++ + + D+ KMG L K MP T A ++ LAI I P GF S+ F + Sbjct: 381 GSVMHAMSGSGDIMKMGGLRKYMPRTHGAFVVYWLAICGIVPFAGFFSKDEILAGAFFTT 440 Query: 419 RVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEA--QEVPNTMIV 476 A++ LA G M ++Y + F G R+ +A E P +M Sbjct: 441 PQGWPPGYNYFLWAVLTLAALGTAFYMS--RLYFLVFSGECRADEETKAHIHESPPSMTW 498 Query: 477 AMLLLA---ALCVLIALS-----------ASWLAPKIMH 501 ++LLA AL I L A WLAP ++ Sbjct: 499 PLILLAVGTALVGFIGLPHIEGIHLPTILADWLAPSLVR 537 >UniRef50_A7HXD8 NADH dehydrogenase (Quinone) n=2 Tax=Bacteria RepID=A7HXD8_PARL1 Length = 564 Score = 131 bits (330), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 124/430 (28%), Positives = 207/430 (48%), Gaps = 62/430 (14%) Query: 75 LRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAA------AMGFFMNIFIASMVAL 128 +R+D+LS LV SL + ++Y+ ++R+ + AA A+G +F A V L Sbjct: 63 MRVDTLSVAFGLVFSLAAFLAAIYAW-HLRDMVQQVAALLYAGSAIG---AVFAADFVTL 118 Query: 129 LVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRE 188 V FW E +++S FLV AR+ + + AGM Y + + +L++ +L+ E Sbjct: 119 FV----FW-----EGTAIASVFLVWARRTEGAYAAGMRYLTVQISSGLLLLAGVILLYLE 169 Query: 189 SGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSG 248 +GS+ F S L S L F FG K LH+W+ A+PAA + L+S Sbjct: 170 TGSIGFGSME-------LGSLATWLVFLAFGIKCAFPLLHNWMHDAYPAATVTGTVLLSV 222 Query: 249 VMVKIGIFGILKVAMDLLAQTGLPLWWGI-LVMAIGAISALLGVLYALAEQDIKRLLAWS 307 K+ ++ + + G P G L++ IGA AL + +AL E D++R+L++S Sbjct: 223 FTTKLAVYALAR---------GFP---GTELLIYIGATMALFPIFFALIENDLRRVLSYS 270 Query: 308 TVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLH 367 +GI+++ VG+ T + L G + H L+ ++ LLF+ GA++ R Sbjct: 271 LNSQLGIMVVGVGIG-----------TPLALNGTVAHALSSVFYQALLFMSVGAVLFRTG 319 Query: 368 THDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQL 427 T ++G L + MPWT CL+G +I+A P +GF+S+ + S S E Sbjct: 320 TSKASELGGLYRTMPWTMLFCLVGGASIAAFPLFSGFVSK----SLILSASGKEGYYY-- 373 Query: 428 AGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVL 487 + +V+L + G V +K+ F G + + E P M+VAM A +C+ Sbjct: 374 ---VWLVLLLASAGAFVHSSLKVSYFAFFG---TDSGKRPSEAPRHMLVAMGATALICIG 427 Query: 488 IALSASWLAP 497 I + + L P Sbjct: 428 IGIYPAVLRP 437 >UniRef50_C7NUN0 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Halorhabdus utahensis DSM 12940 RepID=C7NUN0_HALUD Length = 627 Score = 131 bits (330), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 130/439 (29%), Positives = 206/439 (46%), Gaps = 58/439 (13%) Query: 75 LRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNA 134 L +D L M + ++ + ++S +M E EG G +F+ M+ + D+ Sbjct: 111 LYLDVLGVMMATIAGVVGALALVFSTRFM-EREG-GLTRYYALTLLFVGGMIGFALTDSL 168 Query: 135 FWFIVLFEMMSLSSWFLV-IARQDKTSINAGMLYFFIAHAGSV--LIMIAFLLMGRES-- 189 V +E++ L S+ L+ +D S AG+ F G + L IA L +G + Sbjct: 169 VALYVFWEVLGLCSFGLISFWLEDDASFAAGVKAFVTTRFGDIGLLAGIATLYVGGGTFS 228 Query: 190 --GSLDFASFRTL-SLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALM 246 G +D A+ L + A +F++A G K+ PLH WLP A A + + + Sbjct: 229 IRGLIDQAAAGALPEWTLAAAGGLFIVAAVG---KSAQFPLHVWLPDAMEAPTTSTALIH 285 Query: 247 SGVMVKIGIFGILKVA--MDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLL 304 + MV G++ +L+ D +A WW V+AIG I+A L + A E D KR L Sbjct: 286 AACMVNAGLYLLLRTRPIFDGVA------WWTTAVLAIGTITAFLAAVLATVENDFKRAL 339 Query: 305 AWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAII- 363 A+ T+ +G + A+G+A G+L A H+L+H++FK LLFL AG++I Sbjct: 340 AYCTISQLGYVTAAIGLAG-------------GVLPATAHVLSHSIFKALLFLAAGSVIF 386 Query: 364 ---SRLHTH-DMEKMGALAKR--MPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSL 417 +H H DM + + R MP T A L+G L + +P NGF S+ Y + + Sbjct: 387 ALGGTVHKHVDMYEFRGVGNRRQMPITNVAFLVGILGLIGVPGFNGFWSKEYIFATAMDG 446 Query: 418 SRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVA 477 S +E A V+LA+T L V+ +++Y + F G P +E E P M Sbjct: 447 SPIEMAAF--------VVLAITAVLTVVYSLRIYYLMFLGEP----SESVTESPLAMTGP 494 Query: 478 MLLLAALCVLIALSASWLA 496 + +LA L + SWLA Sbjct: 495 LSILAGLTL-----TSWLA 508 >UniRef50_B1ZA34 Proton-translocating NADH-quinone oxidoreductase, chain M n=159 Tax=cellular organisms RepID=B1ZA34_METPB Length = 527 Score = 131 bits (330), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 79/250 (31%), Positives = 137/250 (54%), Gaps = 13/250 (5%) Query: 158 KTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFG 217 K I A +F GSVL+++A + M E+G+ D + GL ++L F Sbjct: 160 KRRIYASFKFFLYTLLGSVLMLLAIMAMYWEAGTTDIPTLLAHRFPVGLQWWLWLAFFAS 219 Query: 218 FGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGI 277 F K M P+H+WLP AH AP+ S +++G+++K+G +G +++++ +L Sbjct: 220 FAVKMPMWPVHTWLPDAHVEAPTAGSVILAGILLKMGGYGFIRISLPMLPDASASF--AP 277 Query: 278 LVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVG 337 LV A+ I+ + L A+ + DIK+L+A+S+V ++G + L + +L++ G Sbjct: 278 LVFALSVIAIIFTSLTAMMQTDIKKLIAYSSVAHMGFVTLGL------FTLNEQ-----G 326 Query: 338 LLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISA 397 + GALF +++H + G LFL G + R+HT ++ G L KRMP AAA ++ +A Sbjct: 327 IQGALFLMISHGIVSGALFLCVGVVYDRMHTREIAAYGGLVKRMPLYAAAMMVFTMANVG 386 Query: 398 IPPLNGFISE 407 +P +GF+ E Sbjct: 387 LPGTSGFVGE 396 >UniRef50_Q9RGZ2 Na(+)/H(+) antiporter subunit D n=3 Tax=Firmicutes RepID=MRPD_BACPF Length = 493 Score = 131 bits (330), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 113/448 (25%), Positives = 214/448 (47%), Gaps = 37/448 (8%) Query: 49 SGITQLHAGVTLVARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEG 108 +GIT L G + PF + L D + MV++ S++ VVC ++ + Sbjct: 54 NGITVLELG-----NWQAPF---GIVLVADLFATMMVILASIVGVVCLFFAFQTISSERE 105 Query: 109 KGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYF 168 K +A + + + F V FE+M ++S+ L++ K + + Y Sbjct: 106 KYYFYPF--YFFLLAGVNGAFLTGDLFNLFVFFEVMLIASYILIVLGGTKYQLRESLKYV 163 Query: 169 FIAHAGSVLIMIAFLLMGRESGSLDFASF--RTLSLSP-GLASAVFLLAFFGFGAKAGMM 225 I S+L ++ + +G+L+ A + L G+ + + ++ F K G+ Sbjct: 164 VINVFASILFIVGVAYIYSITGTLNMADLAVKVGELEQTGVLNVIAVIFLVVFAMKGGLF 223 Query: 226 PLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAI 285 PL+ WLPR++ P+ +AL G++ K+GI+ I++ + P + L++ + + Sbjct: 224 PLYFWLPRSYFGPPAAIAALFGGLLTKVGIYAIMRTFTLIFNHD--PGFTHTLILILAGL 281 Query: 286 SALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHL 345 + GVL A+++ D KR+L++ + VG +++ +G+ T + + GA++++ Sbjct: 282 TMFFGVLGAVSQFDFKRILSYHIISQVGYMVMGLGI-----------YTQLAIAGAIYYI 330 Query: 346 LNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFI 405 +H + K LFL AGA T D++KMG L K PW A I ++++ IPPL+GF Sbjct: 331 AHHIIVKAALFLFAGATQRITGTTDLKKMGGLLKTHPWLAWMFFISAISLAGIPPLSGFF 390 Query: 406 SEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAE 465 S++ + + A L IA V LAV G L + +K++ F G + T E Sbjct: 391 SKF---------ALILAAFLNENYIIAAVALAV-GLLTLFSMMKIFIYAFWGEQKHTE-E 439 Query: 466 EAQEVPNTMIVAMLLLAALCVLIALSAS 493 +A +++ ++ L AL +++ +A Sbjct: 440 QANFKVGKLLLPIVPLVALTIILGFAAE 467 >UniRef50_Q1NWP0 NADH dehydrogenase (Quinone) n=2 Tax=Deltaproteobacteria RepID=Q1NWP0_9DELT Length = 591 Score = 131 bits (329), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 112/433 (25%), Positives = 201/433 (46%), Gaps = 52/433 (12%) Query: 70 FADLTL---RMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMV 126 F D TL R+DSLS +++L+ V+ +LY L +YE A +++A + Sbjct: 50 FLDWTLTFGRVDSLSLVFAYIMTLMCVIGTLYGLHVENDYEHISAW-------LYVAGSL 102 Query: 127 ALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMG 186 ++ + + +E+M+ SS FLV R ++ AG Y + G ++++ +L Sbjct: 103 GVIFAGDLLVLFLFWEVMAFSSTFLVWLRGTPGALAAGYRYLLVHTFGGLVLLAGIVLHY 162 Query: 187 RESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALM 246 + +G L F F ++ P L + ++ G A + PLH+WLP A+ A + M Sbjct: 163 QATGDLSFNQFDVVN--PTLPVWLIMI---GVILNAAVPPLHAWLPDAYSRATVSGAVFM 217 Query: 247 SGVMVKIGIFGILK--VAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLL 304 K ++ + + M++L + +G I L GV+YAL D++RLL Sbjct: 218 CAFTTKTSVYALCRGFAGMEIL-------------IVLGVIMTLYGVIYALLSNDVRRLL 264 Query: 305 AWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIIS 364 ++ + VG ++ VG+ T + + GA+ H H L+K LLF+G G+++ Sbjct: 265 SYHIISQVGFMVAGVGIG-----------TALAINGAIAHAFAHILYKALLFMGVGSVLY 313 Query: 365 RLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVA 424 ++G L K+MP +IG L+IS +P L+GF+S+ F S A Sbjct: 314 MTGKSKATELGGLYKKMPMALFFTVIGGLSISGVPLLSGFVSKSMVVYGAFDASYYWA-- 371 Query: 425 LQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHA--EEAQEVPNTMIVAMLLLA 482 A +M+ + G + +K+ + + G + + +A + P M + M + A Sbjct: 372 -------AYLMILASVGTFLSVGIKIPYVVWFGENKCSEETWNKAADPPWHMQLGMGIAA 424 Query: 483 ALCVLIALSASWL 495 LC+LI + +L Sbjct: 425 FLCLLIGVYTPYL 437 >UniRef50_Q3Z7Z2 Proton-translocating NADH-quinone oxidoreductase, M subunit n=5 Tax=Dehalococcoides RepID=Q3Z7Z2_DEHE1 Length = 497 Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 85/292 (29%), Positives = 150/292 (51%), Gaps = 25/292 (8%) Query: 124 SMVALLVMDNAFWFIVLFEMMSLSSWFLV----IARQDKTSINAGMLYFFIAHAGSVLIM 179 S+ + V + F + +E+ + +FL+ R++ +++ + F G I+ Sbjct: 125 SITGVFVSLDLLLFFIFWELELIPMYFLISIWGAGRKEYSALKYVLYTLF----GGAFIL 180 Query: 180 IAFLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFF----GFGAKAGMMPLHSWLPRAH 235 L++ +GSLD AS + L+ L A+ +L FF GF K P H+WLP AH Sbjct: 181 AGILILFFATGSLDIASLASTDLNNFLRPAMMVLTFFMFFIGFAIKLPAFPFHTWLPDAH 240 Query: 236 PAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYAL 295 AP+ AS +++G ++K+G + +L++ + + W L++ I I+ + G L Sbjct: 241 TDAPTAASVILAGTLLKMGGYAMLRLNVAMFPDVCRD--WAPLILTIAVINVIYGAAITL 298 Query: 296 AEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLL 355 + DIKRL+A+S+V ++G +LL + L + + GA+ + +H + GLL Sbjct: 299 KQTDIKRLIAYSSVSHMGFVLLGIFT-----------LGEISMNGAVLQMFSHGIITGLL 347 Query: 356 FLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISE 407 F G ++ H D+ K+G LAK+MP TA ++ L A+P +GFI+E Sbjct: 348 FAITGVVMHNTHERDINKLGGLAKQMPRTAIIFILAGLGAMAVPATSGFIAE 399 >UniRef50_B8CK34 NADH-ubiquinone oxidoreductase subunit, putative n=10 Tax=Proteobacteria RepID=B8CK34_SHEPW Length = 570 Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 113/428 (26%), Positives = 192/428 (44%), Gaps = 60/428 (14%) Query: 69 EFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGA-----AAMGFFMNIFIA 123 ++ + R D LS V + + +YSL + A +A+G +F Sbjct: 57 DYELVPYRADKLSLMFGYVFHIAAFISIIYSLHVKDTVQQVAAMLYAGSALG---AVFAG 113 Query: 124 SMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFL 183 ++ L V FW E+++ +S FL+ AR+ S +AGM Y I V++++ L Sbjct: 114 DLLTLFV----FW-----ELLAFTSVFLIWARRTSRSYHAGMRYLIIQVLSGVILLVGAL 164 Query: 184 LMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHAS 243 E+GSL F GL S L F FG K H+WL A+P A + Sbjct: 165 FYASETGSLAFDYI-------GLESIAGWLIFIAFGIKCAFPFFHNWLTDAYPEATPTGT 217 Query: 244 ALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRL 303 ++S K+ ++ + + A G L ++ IGA + +A+ E D++R+ Sbjct: 218 VILSAFTTKVAVYALAR------AYPGTEL-----LVYIGAAMTCFPIFFAVIENDLRRV 266 Query: 304 LAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAII 363 LA+S + VG +++ +G+ T + + GA+ H N +FKGLLF+ GA++ Sbjct: 267 LAYSLINQVGFMVVGIGIG-----------TALAINGAIAHAFNDVIFKGLLFMSMGAVL 315 Query: 364 SRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAV 423 + +G L K MP T C++G +ISA P +GF+S+ S V + Sbjct: 316 HMTGRMNGSDLGGLYKTMPKTTILCIVGAASISAFPLFSGFVSK----------SMVMSA 365 Query: 424 ALQLAGP-IAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLA 482 AL+ I +++L + G+ +K+ F A + P M+ AM + A Sbjct: 366 ALENGYDWIWLMLLFASAGVFHHAGIKIPYFAFFAHDSGLRANDP---PRNMLFAMFIAA 422 Query: 483 ALCVLIAL 490 +LC+ I + Sbjct: 423 SLCIAIGI 430 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P23482 Hydrogenase-4 component B n=69 Tax=Bacteria RepI... 665 0.0 UniRef50_C6CN10 NADH/Ubiquinone/plastoquinone (Complex I) n=15 T... 534 e-150 UniRef50_Q8R9B0 Formate hydrogenlyase subunit 3/Multisubunit Na+... 519 e-145 UniRef50_C7MLM1 Formate hydrogenlyase subunit 3/multisubunit Na+... 485 e-135 UniRef50_Q1PZK0 Similar to membrane-bound [NiFe]-hydrogenase-3, ... 463 e-129 UniRef50_C8W236 Hydrogenase, membrane subunit n=1 Tax=Desulfotom... 462 e-128 UniRef50_D0WGR4 Hydrogenase subunit n=1 Tax=Slackia exigua ATCC ... 459 e-127 UniRef50_Q609T5 Hydrogenase subunit n=1 Tax=Methylococcus capsul... 455 e-126 UniRef50_B1ZSE3 NADH dehydrogenase (Quinone) n=1 Tax=Opitutus te... 455 e-126 UniRef50_Q0W2B5 Hydrogenase, membrane subunit 4-like protein (Hy... 453 e-125 UniRef50_C8PJ79 ATP-binding protein n=1 Tax=Campylobacter gracil... 450 e-124 UniRef50_Q0F380 NADH dehydrogenase subunit N n=1 Tax=Mariprofund... 439 e-121 UniRef50_A7GWM7 ATP-binding protein n=4 Tax=Epsilonproteobacteri... 438 e-121 UniRef50_B8I2P9 NADH/Ubiquinone/plastoquinone (Complex I) n=2 Ta... 437 e-120 UniRef50_A5G8U2 NADH dehydrogenase (Quinone) n=13 Tax=Desulfurom... 429 e-118 UniRef50_Q1Z852 NADH dehydrogenase subunit N n=3 Tax=Vibrionacea... 428 e-118 UniRef50_B1ZSD9 NADH dehydrogenase (Quinone) n=2 Tax=Bacteria Re... 425 e-117 UniRef50_B6AS28 NADH dehydrogenase (Quinone) n=3 Tax=Leptospiril... 421 e-116 UniRef50_B8FUM3 NADH dehydrogenase (Quinone) n=3 Tax=Desulfitoba... 421 e-116 UniRef50_Q12F20 NADH dehydrogenase (Quinone) n=37 Tax=Betaproteo... 417 e-115 UniRef50_B2V8R6 NADH dehydrogenase (Quinone) n=1 Tax=Sulfurihydr... 416 e-114 UniRef50_C0QBF3 HyfB n=1 Tax=Desulfobacterium autotrophicum HRM2... 415 e-114 UniRef50_B6WWH3 Putative uncharacterized protein n=1 Tax=Desulfo... 405 e-111 UniRef50_Q6APE8 Probable hydrogenase, component B-formate hydrog... 401 e-110 UniRef50_A7I7D4 NADH dehydrogenase (Quinone) n=3 Tax=Methanomicr... 400 e-109 UniRef50_A6Q6W0 Ni-Fe hydrogenase, membrane subunit HycC/HyfB n=... 399 e-109 UniRef50_C6PUG7 NADH dehydrogenase (Quinone) n=1 Tax=Clostridium... 399 e-109 UniRef50_C7LSU3 NADH dehydrogenase (Quinone) n=2 Tax=Bacteria Re... 397 e-109 UniRef50_A9QPJ4 Formate hydrogenlyase subunit 3 n=1 Tax=Methylac... 395 e-108 UniRef50_B2HHH3 Oxidoreductase n=6 Tax=Mycobacterium RepID=B2HHH... 394 e-108 UniRef50_Q2FKT7 NADH dehydrogenase (Quinone) n=1 Tax=Methanospir... 393 e-107 UniRef50_A1RWL8 NADH dehydrogenase (Quinone) n=1 Tax=Thermofilum... 391 e-107 UniRef50_Q21AT7 NADH dehydrogenase (Quinone) n=16 Tax=Alphaprote... 390 e-107 UniRef50_A0RMA9 Hydrogenase 4 membrane subunit n=2 Tax=Campyloba... 387 e-106 UniRef50_A6UVK0 NADH dehydrogenase (Quinone) n=2 Tax=cellular or... 386 e-105 UniRef50_A5FPH4 NADH dehydrogenase (Quinone) n=5 Tax=Dehalococco... 385 e-105 UniRef50_C6MX91 NADH dehydrogenase (Quinone) n=1 Tax=Geobacter s... 378 e-103 UniRef50_C5A2R1 Formate hydrogenlyase II subunit D (Mhy2D) n=1 T... 378 e-103 UniRef50_B3E6C5 NADH dehydrogenase (Quinone) n=4 Tax=Desulfuromo... 377 e-103 UniRef50_B4UA31 NADH dehydrogenase (Quinone) n=1 Tax=Hydrogenoba... 377 e-103 UniRef50_C8XAR9 NADH/Ubiquinone/plastoquinone (Complex I) n=1 Ta... 377 e-103 UniRef50_A7HGW4 NADH dehydrogenase (Quinone) n=4 Tax=Anaeromyxob... 372 e-101 UniRef50_C6NX32 Hydrogenase-4 component B / Formate hydrogenlyas... 371 e-101 UniRef50_B8IYV9 NADH dehydrogenase (Quinone) n=3 Tax=Desulfovibr... 364 6e-99 UniRef50_Q2RXM5 NADH dehydrogenase (Quinone) n=1 Tax=Rhodospiril... 362 3e-98 UniRef50_D1B457 NADH/Ubiquinone/plastoquinone (Complex I) n=2 Ta... 361 4e-98 UniRef50_P16429 Formate hydrogenlyase subunit 3 n=77 Tax=Bacteri... 360 1e-97 UniRef50_UPI00003845F5 COG0651: Formate hydrogenlyase subunit 3/... 356 2e-96 UniRef50_B5QVA0 Formate hydrogenlyase subunit 3 n=43 Tax=Enterob... 353 1e-95 UniRef50_B5EKJ3 NADH dehydrogenase (Quinone) n=2 Tax=Acidithioba... 350 1e-94 UniRef50_Q10880 Uncharacterized protein Rv0083/MT0090 n=15 Tax=M... 349 3e-94 UniRef50_A6TVL4 NADH dehydrogenase (Quinone) n=2 Tax=Alkaliphilu... 348 6e-94 UniRef50_B2A694 NADH dehydrogenase (Quinone) n=1 Tax=Natranaerob... 347 7e-94 UniRef50_Q11VC3 NADH dehydrogenase I chain L n=5 Tax=Bacteroidet... 347 8e-94 UniRef50_B9XHI6 Proton-translocating NADH-quinone oxidoreductase... 346 1e-93 UniRef50_B1WQD4 NADH dehydrogenase subunit 5 n=9 Tax=Cyanobacter... 346 2e-93 UniRef50_A0AL63 Complete genome n=20 Tax=Bacillales RepID=A0AL63... 346 2e-93 UniRef50_B5YKJ0 NADH-quinone oxidoreductase chain l n=1 Tax=Ther... 344 7e-93 UniRef50_B5YKQ9 Hydrogenase 4, component B or formate hydrogen l... 343 1e-92 UniRef50_C6HVM9 Putative formate hydrogenlyase subunit 3 (HyfB) ... 343 2e-92 UniRef50_C0YTV8 NADH dehydrogenase I chain L n=1 Tax=Chryseobact... 342 3e-92 UniRef50_B9DJY9 Putative NADH dehydrogenase I chain L n=1 Tax=St... 341 6e-92 UniRef50_A1SQ81 NADH dehydrogenase (Quinone) n=2 Tax=Actinomycet... 339 2e-91 UniRef50_Q49W91 Na(+)/H(+) antiporter subunit A1 n=19 Tax=Bacill... 338 3e-91 UniRef50_B6YTW6 Hydrogenase 4, component B or formate hydrogen l... 338 6e-91 UniRef50_B0BZT2 Proton-translocating NAD(P)H-quinone oxidoreduct... 337 7e-91 UniRef50_D1RUK6 NADH dehydrogenase (Quinone) n=1 Tax=Serratia od... 337 1e-90 UniRef50_Q9RGZ5 Na(+)/H(+) antiporter subunit A n=9 Tax=Firmicut... 336 1e-90 UniRef50_C5QQQ5 CPA3 family monovalent cation:proton (H+) antipo... 335 3e-90 UniRef50_B6YWP6 Hydrogenase 4, subunit 3 n=3 Tax=Thermococcus Re... 335 3e-90 UniRef50_Q04YB3 NADH dehydrogenase (Ubiquinone), L chain n=7 Tax... 335 3e-90 UniRef50_A1ALQ0 Proton-translocating NADH-quinone oxidoreductase... 335 4e-90 UniRef50_UPI00003837CC COG1009: NADH:ubiquinone oxidoreductase s... 334 5e-90 UniRef50_Q1IS54 Proton-translocating NADH-quinone oxidoreductase... 334 8e-90 UniRef50_A1ASR6 NADH dehydrogenase (Quinone) n=1 Tax=Pelobacter ... 333 1e-89 UniRef50_B3QXL9 Proton-translocating NADH-quinone oxidoreductase... 333 1e-89 UniRef50_A6LXP7 Proton-translocating NADH-quinone oxidoreductase... 332 3e-89 UniRef50_Q21TB8 NADH dehydrogenase (Quinone) n=2 Tax=Proteobacte... 332 3e-89 UniRef50_Q55429 NAD(P)H-quinone oxidoreductase chain 5 n=19 Tax=... 330 9e-89 UniRef50_C0GDB1 NADH dehydrogenase (Quinone) n=2 Tax=Dethiobacte... 330 1e-88 UniRef50_D0LZ05 Proton-translocating NADH-quinone oxidoreductase... 329 2e-88 UniRef50_B8J1C9 Proton-translocating NADH-quinone oxidoreductase... 329 3e-88 UniRef50_Q9UYN2 Hydrogenase 4, component B or formate hydrogen l... 329 3e-88 UniRef50_P31971 NAD(P)H-quinone oxidoreductase chain 5 n=25 Tax=... 329 3e-88 UniRef50_B3EIA1 Proton-translocating NADH-quinone oxidoreductase... 328 5e-88 UniRef50_D2QSX4 Proton-translocating NADH-quinone oxidoreductase... 328 6e-88 UniRef50_A7HHY8 Proton-translocating NADH-quinone oxidoreductase... 328 7e-88 UniRef50_B2A3T0 NADH dehydrogenase (Quinone) n=2 Tax=Clostridia ... 327 1e-87 UniRef50_C1SM60 NADH dehydrogenase subunit L n=1 Tax=Denitrovibr... 326 1e-87 UniRef50_Q12ZH7 Na+/H+ antiporter subunit n=2 Tax=Methanosarcina... 326 2e-87 UniRef50_Q2FZV1 Na(+)/H(+) antiporter subunit A1 n=72 Tax=Bacill... 326 2e-87 UniRef50_C0Z765 NADH-quinone oxidoreductase chain L n=2 Tax=Baci... 325 4e-87 UniRef50_Q9XAR5 NADH-quinone oxidoreductase subunit L n=38 Tax=A... 324 5e-87 UniRef50_A8GEJ3 NADH dehydrogenase (Quinone) n=2 Tax=Enterobacte... 324 7e-87 UniRef50_Q1H3T5 NADH dehydrogenase (Quinone) n=12 Tax=Proteobact... 323 1e-86 UniRef50_B3QY40 Proton-translocating NADH-quinone oxidoreductase... 323 2e-86 UniRef50_Q2S2L2 NADH dehydrogenase I, L subunit n=3 Tax=Rhodothe... 322 2e-86 UniRef50_Q1AVJ0 Proton-translocating NADH-quinone oxidoreductase... 321 5e-86 UniRef50_A6TVL5 NADH dehydrogenase (Quinone) n=1 Tax=Alkaliphilu... 321 6e-86 UniRef50_Q8M9U5 NAD(P)H-quinone oxidoreductase subunit 5, chloro... 321 8e-86 UniRef50_B5EN60 Proton-translocating NADH-quinone oxidoreductase... 320 1e-85 UniRef50_C5NVG1 Na(+)/H(+) antiporter subunit A n=1 Tax=Gemella ... 319 2e-85 UniRef50_Q02CT3 Proton-translocating NADH-quinone oxidoreductase... 319 2e-85 UniRef50_C6W0W0 Proton-translocating NADH-quinone oxidoreductase... 319 2e-85 UniRef50_C6D5D4 Proton-translocating NADH-quinone oxidoreductase... 319 2e-85 UniRef50_A7GV43 Proton-translocating NADH-quinone oxidoreductase... 318 3e-85 UniRef50_B1KJV8 Proton-translocating NADH-quinone oxidoreductase... 318 5e-85 UniRef50_D2BHY2 NADH:quinone oxidoreductase subunit 5 (Chain L) ... 318 7e-85 UniRef50_D0ZDU7 Formate hydrogenlyase subunit 3 n=2 Tax=Edwardsi... 318 7e-85 UniRef50_A1ZLY6 NAD(P)H-quinone oxidoreductase chain 5 (NAD(P)Hd... 317 7e-85 UniRef50_Q1RKE6 NADH-quinone oxidoreductase subunit L n=15 Tax=R... 317 8e-85 UniRef50_D2QRI2 Proton-translocating NADH-quinone oxidoreductase... 317 1e-84 UniRef50_C7JBM0 NADH-quinone oxidoreductase chain L n=8 Tax=Acet... 317 1e-84 UniRef50_B2IHV5 Proton-translocating NADH-quinone oxidoreductase... 317 1e-84 UniRef50_C6VXR9 Proton-translocating NADH-quinone oxidoreductase... 317 1e-84 UniRef50_C0A9K9 NADH dehydrogenase (Quinone) n=1 Tax=Opitutaceae... 316 2e-84 UniRef50_B8FRJ9 Proton-translocating NADH-quinone oxidoreductase... 315 3e-84 UniRef50_B2V982 Proton-translocating NADH-quinone oxidoreductase... 315 3e-84 UniRef50_A3ERI6 NADH dehydrogenase (Quinone), chain L n=8 Tax=ce... 315 4e-84 UniRef50_A5UVF8 Proton-translocating NADH-quinone oxidoreductase... 315 4e-84 UniRef50_C4V3R7 NADH dehydrogenase (Quinone) n=1 Tax=Selenomonas... 315 4e-84 UniRef50_C9RKX6 Proton-translocating NADH-quinone oxidoreductase... 314 5e-84 UniRef50_Q895D8 Sodium/proton antiporter shaA n=1 Tax=Clostridiu... 314 5e-84 UniRef50_A8LTG8 NADH dehydrogenase (Quinone) n=58 Tax=Proteobact... 314 6e-84 UniRef50_C6HUH6 NADH dehydrogenase (Quinone), chain L n=2 Tax=Ba... 314 9e-84 UniRef50_Q6GBK7 Putative antiporter subunit mnhA2 n=63 Tax=Staph... 313 1e-83 UniRef50_C1ZFV1 NADH dehydrogenase subunit L n=1 Tax=Planctomyce... 313 1e-83 UniRef50_C1F220 NADH dehydrogenase I, L subunit n=2 Tax=Bacteria... 313 1e-83 UniRef50_B1ZRS2 Proton-translocating NADH-quinone oxidoreductase... 313 2e-83 UniRef50_C4UKF4 NADH dehydrogenase (Quinone) n=1 Tax=Yersinia ru... 313 2e-83 UniRef50_Q67KP4 NADH dehydrogenase I subunit L n=1 Tax=Symbiobac... 312 3e-83 UniRef50_B3Q7M3 Proton-translocating NADH-quinone oxidoreductase... 312 3e-83 UniRef50_C5VLQ3 NADH dehydrogenase subunit 5 n=10 Tax=Bacteroida... 311 5e-83 UniRef50_Q52978 Probable K(+)/H(+) antiporter subunit A/B n=110 ... 311 5e-83 UniRef50_C5A3D6 Formate hydrogenlyase I subunit D (Mhy1D) n=2 Ta... 311 8e-83 UniRef50_Q28T51 Proton-translocating NADH-quinone oxidoreductase... 311 8e-83 UniRef50_B6YQ51 NADH dehydrogenase I subunit L n=32 Tax=Bacteroi... 310 1e-82 UniRef50_UPI00016C46D7 NADH dehydrogenase I chain L n=1 Tax=Gemm... 310 1e-82 UniRef50_Q1IZW2 NADH-quinone oxidoreductase, L subunit n=3 Tax=D... 309 3e-82 UniRef50_B2ULN9 Proton-translocating NADH-quinone oxidoreductase... 309 3e-82 UniRef50_Q3AH00 Proton-translocating NADH-quinone oxidoreductase... 309 3e-82 UniRef50_D0D447 NADH-quinone oxidoreductase subunit l n=65 Tax=c... 308 3e-82 UniRef50_B6YT76 Hydrogenase 4, component B or formate hydrogen l... 308 4e-82 UniRef50_C4LLM4 Na(+)/H(+) antiporter subunit n=3 Tax=Corynebact... 308 4e-82 UniRef50_C2FWK2 Possible NADH dehydrogenase (Quinone) n=2 Tax=Sp... 308 5e-82 UniRef50_C1A8Y3 NADH-quinone oxidoreductase chain L n=1 Tax=Gemm... 306 2e-81 UniRef50_B9ZEN4 Proton-translocating NADH-quinone oxidoreductase... 305 3e-81 UniRef50_B3DZT2 NADH dehydrogenase subunit L n=2 Tax=Verrucomicr... 304 5e-81 UniRef50_B4SLF9 NADH dehydrogenase (Quinone) n=20 Tax=cellular o... 304 7e-81 UniRef50_B9LUW7 NADH/Ubiquinone/plastoquinone (Complex I) n=13 T... 304 1e-80 UniRef50_A9B485 Proton-translocating NADH-quinone oxidoreductase... 302 2e-80 UniRef50_P50939 NADH-quinone oxidoreductase subunit L n=36 Tax=c... 302 4e-80 UniRef50_A9F578 NADH dehydrogenase I chain M n=1 Tax=Sorangium c... 302 4e-80 UniRef50_B6YWQ6 Hydrogenase 4, subunit 3 n=2 Tax=Thermococcus Re... 301 5e-80 UniRef50_C7M2U8 Proton-translocating NADH-quinone oxidoreductase... 300 1e-79 UniRef50_Q12ZH4 Na+/H+ antiporter subunit n=2 Tax=Methanosarcina... 299 2e-79 UniRef50_D1Y0I6 Putative NADH dehydrogenase subunit L n=1 Tax=Pr... 299 2e-79 UniRef50_Q3AB32 Carbon monoxide-induced hydrogenase, membrane an... 299 2e-79 UniRef50_B8DNI8 NADH dehydrogenase (Quinone) n=4 Tax=Desulfovibr... 299 2e-79 UniRef50_Q39QB8 NADH-plastoquinone oxidoreductase, chain 5 n=8 T... 299 2e-79 UniRef50_Q67NV3 Na+/H+ antiporter subunit n=1 Tax=Symbiobacteriu... 298 4e-79 UniRef50_Q2YA95 Proton-translocating NADH-quinone oxidoreductase... 298 4e-79 UniRef50_Q7NHD8 NADH dehydrogenase subunit 5 n=1 Tax=Gloeobacter... 298 5e-79 UniRef50_Q9UYP1 Hydrogenase 4, component F or formate hydrogen l... 298 5e-79 UniRef50_C0GJ41 NADH dehydrogenase (Quinone) n=1 Tax=Dethiobacte... 297 7e-79 UniRef50_C9RJK6 Proton-translocating NADH-quinone oxidoreductase... 297 8e-79 UniRef50_A8JYL0 Formate hydrogenlyase subunit D n=1 Tax=Thermoco... 297 1e-78 UniRef50_D2RZ77 Proton-translocating NADH-quinone oxidoreductase... 297 1e-78 UniRef50_B6YTX9 Hydrogenase 4, component F or formate hydrogen l... 297 1e-78 UniRef50_B2A693 Proton-translocating NADH-quinone oxidoreductase... 296 1e-78 UniRef50_Q2C5U2 NADH-plastoquinone oxidoreductase, chain 5 n=2 T... 296 3e-78 UniRef50_A1SE38 Proton-translocating NADH-quinone oxidoreductase... 296 3e-78 UniRef50_A9A3Z6 Proton-translocating NADH-quinone oxidoreductase... 295 3e-78 UniRef50_C6A3Z7 Membrane-bound hydrogenase MBH 2, subunit Mbh2H ... 295 4e-78 UniRef50_C7NIQ7 NADH:ubiquinone oxidoreductase subunit 5 (Chain ... 295 4e-78 UniRef50_D1A433 Proton-translocating NADH-quinone oxidoreductase... 295 5e-78 UniRef50_B0VE74 pH adaptation potassium efflux system transmembr... 295 5e-78 UniRef50_Q85FH9 NAD(P)H-quinone oxidoreductase subunit 5, chloro... 294 5e-78 UniRef50_B6YTY8 Membrane bound hydrogenase, MbhH subunit n=9 Tax... 292 2e-77 UniRef50_D0XMF8 NADH dehydrogenase (Quinone) n=3 Tax=Alphaproteo... 292 4e-77 UniRef50_Q2S1W7 NADH dehydrogenase, putative n=1 Tax=Salinibacte... 291 5e-77 UniRef50_C4K6N0 NADH dehydrogenase I chain L, membrane subunit n... 291 5e-77 UniRef50_A4XS82 NADH dehydrogenase (Quinone) n=1 Tax=Pseudomonas... 291 9e-77 UniRef50_Q466B6 F420H2 dehydrogenase subunit L n=5 Tax=Methanosa... 290 1e-76 UniRef50_A1WYN7 NADH dehydrogenase (Quinone) n=5 Tax=Gammaproteo... 290 1e-76 UniRef50_A2SS19 Membrane bound hydrogenase subunit mbhH n=3 Tax=... 290 1e-76 UniRef50_A5UV30 NADH dehydrogenase (Quinone) n=4 Tax=Bacteria Re... 289 2e-76 UniRef50_Q649J3 NADH dehydrogenase/oxidoreductase n=4 Tax=Archae... 288 4e-76 UniRef50_A6DPK7 NADH-ubiquinone/plastoquinone family protein n=1... 288 4e-76 UniRef50_Q1QZ48 NADH dehydrogenase (Quinone) n=15 Tax=cellular o... 288 5e-76 UniRef50_UPI0001C3127D proton-translocating NADH-quinone oxidore... 288 5e-76 UniRef50_Q2RXM6 NADH dehydrogenase (Quinone) n=1 Tax=Rhodospiril... 287 7e-76 UniRef50_C1AB28 NADH-quinone oxidoreductase chain L n=1 Tax=Gemm... 287 8e-76 UniRef50_A4X1Y8 Proton-translocating NADH-quinone oxidoreductase... 287 9e-76 UniRef50_Q2RUH4 NADH dehydrogenase (Quinone) n=3 Tax=Alphaproteo... 286 1e-75 UniRef50_B1VI36 pH adaptation potassium efflux system transmembr... 286 2e-75 UniRef50_B2SEW0 NADH dehydrogenase I, L subunit n=25 Tax=Proteob... 286 2e-75 UniRef50_D0LWA1 NADH/Ubiquinone/plastoquinone (Complex I) n=1 Ta... 285 4e-75 UniRef50_C3PH86 pH adaptation potassium efflux system transmembr... 284 6e-75 UniRef50_C0XU58 CPA3 family monovalent cation (K+ or Na+):proton... 284 8e-75 UniRef50_D1JBE3 Putative NADH-quinone oxidoreductase, subunit M ... 284 9e-75 UniRef50_Q9HJK6 NADH dehydrogenase, chain L related protein n=6 ... 284 9e-75 UniRef50_B3QPF9 NADH dehydrogenase (Quinone) n=1 Tax=Chlorobacul... 284 1e-74 UniRef50_C8XH11 NADH/Ubiquinone/plastoquinone (Complex I) n=1 Ta... 283 1e-74 UniRef50_A7HGW3 NADH dehydrogenase (Quinone) n=4 Tax=Anaeromyxob... 283 1e-74 UniRef50_Q1IS53 Proton-translocating NADH-quinone oxidoreductase... 283 1e-74 UniRef50_A7JYE5 Na(+) H(+) antiporter subunit D n=3 Tax=Vibrio R... 283 1e-74 UniRef50_D0LZ06 Proton-translocating NADH-quinone oxidoreductase... 283 2e-74 UniRef50_D2S7T6 NADH dehydrogenase (Quinone) n=1 Tax=Geodermatop... 282 2e-74 UniRef50_UPI00005100B6 putative monovalent cation/H+ antiporter ... 282 2e-74 UniRef50_C0GRM0 Proton-translocating NADH-quinone oxidoreductase... 282 3e-74 UniRef50_B1I6I5 NADH-quinone oxidoreductase subunit N n=1 Tax=Ca... 282 3e-74 UniRef50_C9N684 Proton-translocating NADH-quinone oxidoreductase... 282 3e-74 UniRef50_D1JBE0 Putative NADH-quinone oxidoreductase, subunit M ... 282 3e-74 UniRef50_D2R5F8 Proton-translocating NADH-quinone oxidoreductase... 282 3e-74 UniRef50_C0GJ30 NADH dehydrogenase (Quinone) n=1 Tax=Dethiobacte... 282 4e-74 UniRef50_B5IUC0 NADH-Ubiquinone/plastoquinone (Complex I), domai... 281 5e-74 UniRef50_C1TPN6 Formate hydrogenlyase subunit 3/multisubunit Na+... 281 5e-74 UniRef50_C5CEV1 NADH/Ubiquinone/plastoquinone (Complex I) n=1 Ta... 281 6e-74 Sequences not found previously or not previously below threshold: UniRef50_A9EX64 NADH dehydrogenase (Ubiquinone) n=3 Tax=cellular... 338 5e-91 UniRef50_Q1IS43 Proton-translocating NADH-quinone oxidoreductase... 331 7e-89 UniRef50_Q32RH9 NAD(P)H-quinone oxidoreductase subunit 5, chloro... 313 1e-83 UniRef50_A9B6Y2 Proton-translocating NADH-quinone oxidoreductase... 310 1e-82 UniRef50_Q2W3J5 NADH:ubiquinone oxidoreductase subunit 5 n=6 Tax... 301 4e-80 UniRef50_C0JX69 Subunit 5 of NADH-plastoquinone oxidoreductase n... 300 9e-80 UniRef50_B0SZ37 Proton-translocating NADH-quinone oxidoreductase... 300 1e-79 UniRef50_B3PW10 NADH-ubiquinone oxidoreductase protein, chain L ... 300 1e-79 UniRef50_C2BM70 CPA3 family monovalent cation:proton (H+) antipo... 296 3e-78 UniRef50_Q0C1D3 NADH-quinone oxidoreductase, L subunit n=4 Tax=c... 295 4e-78 UniRef50_A8A9X6 Proton-translocating NADH-quinone oxidoreductase... 293 2e-77 UniRef50_C2KMP0 NADH dehydrogenase (Quinone) n=2 Tax=Mobiluncus ... 292 3e-77 UniRef50_A5GD02 Proton-translocating NADH-quinone oxidoreductase... 291 5e-77 UniRef50_C0WGQ4 CPA3 family monovalent cation:proton (H+) antipo... 291 7e-77 UniRef50_A4GYW4 NAD(P)H-quinone oxidoreductase subunit 5, chloro... 291 9e-77 UniRef50_C6XJX2 Proton-translocating NADH-quinone oxidoreductase... 289 2e-76 UniRef50_Q5FC98 NADH-quinone oxidoreductase chain L n=18 Tax=Ric... 289 3e-76 UniRef50_B1NWJ6 NAD(P)H-quinone oxidoreductase subunit 5, chloro... 288 4e-76 UniRef50_B0SFU4 NADH dehydrogenase (Ubiquinone), M chain n=6 Tax... 288 5e-76 UniRef50_Q34313 NADH-ubiquinone oxidoreductase chain 5 n=6 Tax=E... 288 5e-76 UniRef50_Q9K1B0 NADH-quinone oxidoreductase subunit L n=127 Tax=... 288 6e-76 UniRef50_Q3J3E6 NADH dehydrogenase I chain L n=72 Tax=cellular o... 287 7e-76 UniRef50_P56752 NAD(P)H-quinone oxidoreductase subunit 5, chloro... 287 1e-75 UniRef50_C1XJC0 NADH dehydrogenase subunit L n=2 Tax=Meiothermus... 287 1e-75 UniRef50_P29388 NADH-ubiquinone oxidoreductase chain 5 n=133 Tax... 287 1e-75 UniRef50_Q9PMA7 NADH-quinone oxidoreductase subunit L n=43 Tax=E... 286 2e-75 UniRef50_B4RCL7 NADH dehydrogenase I, L subunit n=9 Tax=Proteoba... 285 5e-75 UniRef50_Q4UWA7 NADH-ubiquinone oxidoreductase NQO12 subunit n=5... 284 1e-74 UniRef50_Q28L00 NADH dehydrogenase (Quinone) n=1 Tax=Jannaschia ... 284 1e-74 UniRef50_C8NJU8 NADH ubiquinone oxidoreductase subunit 5 (Chain ... 283 1e-74 UniRef50_A9A3Z7 Proton-translocating NADH-quinone oxidoreductase... 282 2e-74 >UniRef50_P23482 Hydrogenase-4 component B n=69 Tax=Bacteria RepID=HYFB_ECOLI Length = 672 Score = 665 bits (1716), Expect = 0.0, Method: Composition-based stats. Identities = 672/672 (100%), Positives = 672/672 (100%) Query: 1 MDALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTL 60 MDALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTL Sbjct: 1 MDALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTL 60 Query: 61 VARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNI 120 VARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNI Sbjct: 61 VARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNI 120 Query: 121 FIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMI 180 FIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMI Sbjct: 121 FIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMI 180 Query: 181 AFLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPS 240 AFLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPS Sbjct: 181 AFLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPS 240 Query: 241 HASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDI 300 HASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDI Sbjct: 241 HASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDI 300 Query: 301 KRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAG 360 KRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAG Sbjct: 301 KRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAG 360 Query: 361 AIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRV 420 AIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRV Sbjct: 361 AIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRV 420 Query: 421 EAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLL 480 EAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLL Sbjct: 421 EAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLL 480 Query: 481 LAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLA 540 LAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLA Sbjct: 481 LAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLA 540 Query: 541 MPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQ 600 MPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQ Sbjct: 541 MPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQ 600 Query: 601 LDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVV 660 LDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVV Sbjct: 601 LDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVV 660 Query: 661 AALVVLLIAIAV 672 AALVVLLIAIAV Sbjct: 661 AALVVLLIAIAV 672 >UniRef50_C6CN10 NADH/Ubiquinone/plastoquinone (Complex I) n=15 Tax=Gammaproteobacteria RepID=C6CN10_DICZE Length = 679 Score = 534 bits (1376), Expect = e-150, Method: Composition-based stats. Identities = 400/660 (60%), Positives = 498/660 (75%), Gaps = 4/660 (0%) Query: 1 MDALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTL 60 + LQ L SL LYL +L SL + LAI+LSG+ +L GG G+++ L G L Sbjct: 8 ITPLQGLGLSLALYLAGALFSLLCCRRESLAIRLSGLCALAGGCAGVLAAAPVLLGGGAL 67 Query: 61 VARFAPPFE-FADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMN 119 A F PF+ FA LTLR D+L+AFM LVISLLV V +LYSL Y+ EY G+GA AMGFFMN Sbjct: 68 TAIFDGPFDAFAHLTLRFDTLAAFMTLVISLLVTVSALYSLAYLEEYRGRGAWAMGFFMN 127 Query: 120 IFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIM 179 +F+ASMVAL+V+DNAF+FIVLFE+MSLSS+FLVIA QD +++AG+LYF IAHAGSVLIM Sbjct: 128 LFVASMVALVVVDNAFYFIVLFEVMSLSSYFLVIADQDDEAVSAGLLYFLIAHAGSVLIM 187 Query: 180 IAFLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAP 239 AF L+ R S SLDFA FR SLS AS VFLLAFFGFGAKAGM+PLH WLPRAHPAAP Sbjct: 188 AAFFLLYRHSASLDFADFRHASLSAPQASVVFLLAFFGFGAKAGMLPLHGWLPRAHPAAP 247 Query: 240 SHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQD 299 SHASALMSGVMVKIG+FGI+KV +DLL T WWG++V+A GA+S++LGVLYALAE D Sbjct: 248 SHASALMSGVMVKIGVFGIIKVGIDLLGAT--ETWWGVVVLAFGAVSSVLGVLYALAEHD 305 Query: 300 IKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGA 359 IKRLLA+ TVEN+GIIL+ VGV M+G++ H PLL ++GLLG L+HLLNHA+FKGLLFLGA Sbjct: 306 IKRLLAYHTVENIGIILMGVGVGMIGIATHHPLLALLGLLGGLYHLLNHAVFKGLLFLGA 365 Query: 360 GAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSR 419 GA+I R+HT DMEKMG LA+ MP TA A L+GC+AISA+PPLNGF+SEW+T+QSLF+LS Sbjct: 366 GAVIYRVHTKDMEKMGGLARLMPRTALAFLVGCMAISALPPLNGFVSEWFTYQSLFTLSH 425 Query: 420 VEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAML 479 + L+LA PIA+VMLA+TG LA MCFVK+YGI+FCGAPRS A A+EVP M VAML Sbjct: 426 DGGIGLRLAAPIAIVMLAITGALAAMCFVKVYGISFCGAPRSEKATHAREVPWPMTVAML 485 Query: 480 LLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPG-TFHTQVTPSLLLLLL 538 LLA LCVL+ + AS ++P I IA TP +A G+ + PG + T++ L+ +LL Sbjct: 486 LLALLCVLLGIGASVVSPIITRIAADLAQTPAVAMAQGLGVFPGDSQQTRLNTPLIFILL 545 Query: 539 LAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLR 598 LA+PLLP + + R R FR+ G WACGYG+E AM+ S QPLRV+F+ L+R+R Sbjct: 546 LALPLLPLMLYSLLRGPRLGFRQKGTPWACGYGYEQAMSASAGSFTQPLRVMFAPLYRVR 605 Query: 599 QQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLY 658 + LDP + + L T A EP WD+RV+ P+VS QR+++ +Q +Q GDFR+YCLY Sbjct: 606 KTLDPAPAMQQALEKTTQAAARAEPVWDDRVVMPLVSGVQRISRAVQWIQHGDFRVYCLY 665 >UniRef50_Q8R9B0 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit n=2 Tax=Thermoanaerobacteraceae RepID=Q8R9B0_THETN Length = 673 Score = 519 bits (1337), Expect = e-145, Method: Composition-based stats. Identities = 288/671 (42%), Positives = 420/671 (62%), Gaps = 4/671 (0%) Query: 1 MDALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTL 60 M QL S+ LY+ +L SL L ++A +SG T+ + G G+ S + L G Sbjct: 2 MTVQQLFLLSIFLYVVGALISLGLNRDGKIANYVSGTTAFLAGCTGVASAVPVLIEGKGF 61 Query: 61 VARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNI 120 + F T+ +D LSAFM LVISLL + +YS++Y EY GKG MGF NI Sbjct: 62 ILEGMEFIPFGRFTINVDPLSAFMTLVISLLSIATGVYSISYQEEYIGKGTGVMGFLNNI 121 Query: 121 FIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQD-KTSINAGMLYFFIAHAGSVLIM 179 FI SM+ ++ DNAF+F+V +E+M+L S+FLV Q+ + +I AG +YF +AH G+VLIM Sbjct: 122 FIVSMILVVTSDNAFYFLVFWELMTLVSYFLVCFEQENREAIKAGFVYFVMAHVGTVLIM 181 Query: 180 IAFLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAP 239 I+F+L +G+ DFA+FR +LSP + + FLLAF GFG KAG++P H WLP+AHPAAP Sbjct: 182 ISFILFYVYTGTFDFAAFRNANLSPVIKNLAFLLAFLGFGVKAGIVPFHFWLPQAHPAAP 241 Query: 240 SHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQD 299 S+ SALMSGVM+K I+GI++V +D L WWG+ V+A GAISA+ GVLYA++E D Sbjct: 242 SNVSALMSGVMIKTAIYGIIRVGVDFLGAA--TWWWGLTVLAFGAISAVFGVLYAVSEND 299 Query: 300 IKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGA 359 +KRLLA+S++ENVGIIL+ VG M+G++ + ++G+L L+HL+NHA+FKGLLFLGA Sbjct: 300 LKRLLAYSSIENVGIILMGVGAGMMGIATGYVSVGILGILAGLYHLINHAVFKGLLFLGA 359 Query: 360 GAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSR 419 G+++ RLHT +ME+MG LA+ MPWT IG L+ISA+PPLNGF+S+W+T+ +LF++S Sbjct: 360 GSVVYRLHTRNMEEMGGLARYMPWTGLTFFIGALSISALPPLNGFVSKWFTYHTLFAVST 419 Query: 420 VEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAML 479 +V +++A P+A V LA+TG L +CFVK YG+TF G R + + +EVP TM++ M Sbjct: 420 KGSVLIRMAFPLAAVALALTGALTSLCFVKAYGVTFTGPFRGGNELKIKEVPVTMLIGMG 479 Query: 480 LLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLL 539 LLA C ++ L A A I ++A A + V+ G+++ P + + + L+L+ + Sbjct: 480 LLAIGCFVLGLGAPVGAGYIANVASALLHVSSPKVSDGLSIFPASSEQAMLSTPLVLVFV 539 Query: 540 AMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQ 599 + L + +RA R + WACGY + + MA + L +FS ++ LR Sbjct: 540 VGLAILPLLIIGTGGKRAGRRVDFEPWACGYKYSSRMAWTSTAFAHSLYPLFSPVYLLRT 599 Query: 600 QLDPTLRLNKGLA-HVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLY 658 R L A E W+ + P++ + K Q Q+G+ R+YCLY Sbjct: 600 AFTEAGRFIILLFKKAMAYISQIELMWERYIYYPLLHFMVYIGKRAQTFQTGNVRMYCLY 659 Query: 659 VVAALVVLLIA 669 ++ L VLLIA Sbjct: 660 IILTLGVLLIA 670 >UniRef50_C7MLM1 Formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit n=3 Tax=Bacteria RepID=C7MLM1_CRYCD Length = 672 Score = 485 bits (1249), Expect = e-135, Method: Composition-based stats. Identities = 292/660 (44%), Positives = 406/660 (61%), Gaps = 4/660 (0%) Query: 1 MDALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTL 60 M A L S++ +LAS+ + + + + + +V + GI +G Q G Sbjct: 1 MSATTLFLTSVVFSCVGALASILAMRNQQASKVIGCVFGMVSALFGIAAG-CQAIVGTAE 59 Query: 61 VARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNI 120 + PF FA+ +L ++ LS ++LVIS+L +Y L Y EY+G+G MGFFMN+ Sbjct: 60 WSSVVTPFSFANFSLLLNPLSGLLMLVISVLAFAAWIYGLNYFDEYKGQGLGTMGFFMNL 119 Query: 121 FIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMI 180 FIASM ++ +DNA WF+V FE+MSL+S+FLVI Q++TSI G LY +AH G LIMI Sbjct: 120 FIASMGFVICVDNALWFLVFFELMSLTSYFLVIVEQNETSIKGGFLYLIMAHIGFFLIMI 179 Query: 181 AFLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPS 240 AF +M +GS +F +FRT + SP ++S VF+L F GFG KAGM+P HSWLP+AHPAAPS Sbjct: 180 AFFVMAGLTGSFEFQAFRTSAFSPVISSLVFVLCFIGFGCKAGMIPFHSWLPQAHPAAPS 239 Query: 241 HASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDI 300 + SALMSG M+KIG+FG++KV +DLL + + LWWGILV+ GA+S++LGV+YALAE DI Sbjct: 240 NVSALMSGGMIKIGVFGMVKVGLDLLQSSPVELWWGILVLLFGAVSSVLGVVYALAEHDI 299 Query: 301 KRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAG 360 KRLLA+ +VEN+GIILL VG+ +G+++ +P++ V+G L +HL NHA+FKGLLFLGAG Sbjct: 300 KRLLAYHSVENIGIILLGVGIGFIGVAVGNPIVAVLGFLAGFYHLFNHAMFKGLLFLGAG 359 Query: 361 AIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRV 420 +++ T +MEKMG LA+ MP TA LIG LAISAIPPLNGF+SEW+T+QS+F+ + Sbjct: 360 SVLYSTGTRNMEKMGGLARVMPVTAMCFLIGSLAISAIPPLNGFVSEWFTYQSMFTAAFA 419 Query: 421 EAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLL 480 ++L A V LA+TG LAV CFVK YG+TF APRS A AQEVP M AM L Sbjct: 420 GDAVIRLFAAFAAVSLAITGALAVTCFVKAYGVTFLSAPRSDVARNAQEVPGPMKFAMGL 479 Query: 481 LAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLA 540 +A +CV + L A W+AP + HIA A P V +G+A V + V+ L+ +LL+ Sbjct: 480 IAFICVCMGLGAPWVAPIMQHIAEATVQAPSLGVTAGLANVNVSTAGVVSTPLIAVLLIG 539 Query: 541 MPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQ 600 + L L + D WACGY M + + L+ R Sbjct: 540 LVGLA--IGLRALFDKGGVDEREDPWACGYHPNAHMPVIATSFASQVNMFLGPLYTARDV 597 Query: 601 LDPTL-RLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYV 659 R A+ E D+ ++ ++ ++Q ++ GDFRLY LY+ Sbjct: 598 FSRQSDRATALFNGTVEGAKRIEGIPDKYLVDAPARFVNWISAKVQKIEGGDFRLYILYI 657 >UniRef50_Q1PZK0 Similar to membrane-bound [NiFe]-hydrogenase-3, subunit C n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PZK0_9BACT Length = 678 Score = 463 bits (1192), Expect = e-129, Method: Composition-based stats. Identities = 233/677 (34%), Positives = 372/677 (54%), Gaps = 11/677 (1%) Query: 3 ALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVA 62 A L S+ILY +L +L + +S I + + I+ I+ L G+ + Sbjct: 2 AEHLFVISIILYAIGALFALCFFKWQAVGNYISLICAAIASCFSIVLSISVLTNGLIIHF 61 Query: 63 RFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAM-GFFMNIF 121 F +D LS+F +LVIS++ V S+YS+ Y + Y K GF N+ Sbjct: 62 DFLIYHAIIRYNFLLDPLSSFFMLVISVIGFVASIYSMGYTKLYVNKRDTRFLGFAYNLL 121 Query: 122 IASMVALLVMDNAFWFIVLFEMMSLSSWFLVIA-RQDKTSINAGMLYFFIAHAGSVLIMI 180 + SM+ ++ +NA F++++E+M+L S+FLVI ++ T+ AG +Y ++H G+ LI + Sbjct: 122 LVSMLLVVTANNALVFMIVWELMTLVSFFLVIFEHENPTNRKAGYVYLVMSHIGAGLIAV 181 Query: 181 AFLLMGRESG---SLDFASFRTLS--LSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAH 235 AF +M +G + F FR + + P + VF L GFG KAG+ PLH WLP AH Sbjct: 182 AFFIMFAYAGEAFTFSFDDFRHIGAHMPPIYKNIVFFLIIIGFGIKAGIFPLHLWLPMAH 241 Query: 236 PAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYAL 295 PAAPS+ S +MSGVM+K I+G ++ + L T P WWG +V+ GA SA+LG+LYAL Sbjct: 242 PAAPSNVSMVMSGVMIKTAIYGFIRFYFEFL--TPCPPWWGFIVLVAGASSAILGILYAL 299 Query: 296 AEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLL 355 E+DIK LLA+S+VEN+GIIL+ +G++M+ S + L+ + ++ L+HL+NHA+FK LL Sbjct: 300 MERDIKTLLAYSSVENIGIILIGIGLSMIFKSYNLMTLSSLAMMAGLYHLINHAVFKCLL 359 Query: 356 FLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLF 415 F AG I HT ++E++G L KR+ TA L+G L+ISAIPPLNGF+SEW +QSL Sbjct: 360 FGCAGNIYYSTHTKNIEELGGLIKRLRVTAPLFLVGALSISAIPPLNGFMSEWLIFQSLL 419 Query: 416 SLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMI 475 + + +V ++ I ++A+TG L MCFVK +G++F PRS H +A+EVP M+ Sbjct: 420 NGFYIPSVFFKVMTVICGAIVALTGALVAMCFVKAFGVSFLALPRSEHTRKAKEVPLVML 479 Query: 476 VAMLLLAALCVLIALSASWLAPKIMHI-AHAFTNTPPATVASGIALVPGTFHTQVT-PSL 533 V+M +LA++CV + L + + I + H + S L + HT T S Sbjct: 480 VSMGILASMCVFMGLFPATIMATINQVNTHLLGTNIINIITSYDWLQTKSIHTNFTDLSP 539 Query: 534 LLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSA 593 + + LL + R +R + W CG E + +P +V+F Sbjct: 540 KSAPIFGLILLVITFGFLTMLRPGFTKRIYETWTCGITPEPRFGYTATAFTKPFKVIFGN 599 Query: 594 LFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFR 653 L+R R ++ T + K A P +++ P+ S ++ +I+ + +G Sbjct: 600 LYRPRFEISTTYSVPKYFAKSITYLGEITPIFEKYFYNPVSSYVLNISNKIRWVHTGSIH 659 Query: 654 LYCLYVVAALVVLLIAI 670 +Y Y+ L++ ++++ Sbjct: 660 VYLAYIFVTLLIAILSV 676 >UniRef50_C8W236 Hydrogenase, membrane subunit n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W236_DESAS Length = 661 Score = 462 bits (1190), Expect = e-128, Method: Composition-based stats. Identities = 243/670 (36%), Positives = 367/670 (54%), Gaps = 21/670 (3%) Query: 3 ALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVA 62 QL ++LYL ++ L L +L++ L G++G+ G+ L A Sbjct: 6 QEQLGLMVILLYLSGAILPLLLKTSRKLSLWLGCFLGGAAGLLGLGLGLASLLAPEPWTV 65 Query: 63 RFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFI 122 + MD LS F V ISL+V + S YS YM Y+ + A F N+F+ Sbjct: 66 NLGTVLPGVVFQIVMDGLSGFFVATISLVVALVSFYSWNYMSIYKTENIAWWSFCYNVFV 125 Query: 123 ASMVALLVMDNAFWFIVLFEMMSLSSWFLVIA-RQDKTSINAGMLYFFIAHAGSVLIMIA 181 SM+ ++ + NA F++ +E+M+L+S+FLV + + AG Y + H G+V IM A Sbjct: 126 LSMLLVVTVTNAIMFLIFWELMTLASYFLVTFEYRHQQVRKAGFSYIVMTHLGTVFIMTA 185 Query: 182 FLLMGRESGSLDFASFRT--LSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAP 239 F LM + +G DFA L + S +F+ A GFG KAG++PLH WLP AHPAAP Sbjct: 186 FFLMFKGTGGWDFAVLSANSHGLPDAVKSLIFVCALIGFGTKAGIVPLHIWLPLAHPAAP 245 Query: 240 SHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQD 299 S+ SA+MSGVM+K I+G++++ +D+L P WWG +V+A+G +SA++GVLYAL E D Sbjct: 246 SNVSAVMSGVMLKTAIYGMIRLIIDILGPG--PAWWGGVVLAVGVVSAVMGVLYALMEHD 303 Query: 300 IKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGA 359 +KRLLA+ +VEN+GIIL+ +G A++ + P+ V L LFH+LNHA+FK LLFLG Sbjct: 304 MKRLLAFHSVENIGIILMGLGTALIFYAWSMPVAAAVALAAGLFHVLNHAIFKSLLFLGT 363 Query: 360 GAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSR 419 G++ H+ D+E++G L K+MP TA L+G ++ISAIPP NGF SE+ +QSL +S Sbjct: 364 GSVYYTTHSKDIEELGGLIKKMPQTALLFLVGAISISAIPPFNGFASEYQIYQSLLGMSY 423 Query: 420 VEAVALQ-LAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAM 478 + A +AG ++ V LA+TG LA CFVK +GI+F PR+ A A+EVP M ++M Sbjct: 424 QKVSAFWSIAGVLSGVALALTGALAAACFVKAFGISFLALPRTKKAAAAEEVPFLMRISM 483 Query: 479 LLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLL 538 LA LC+L ++ + I + LVPGT ++ + L L Sbjct: 484 APLAVLCLLFGVAPGLVLNNITPLIEQ--------------LVPGTPLPEIATYNMNLTL 529 Query: 539 LAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLR 598 L + + L+ + RRT + W CG M + QP+R + A+ + + Sbjct: 530 LLVLVGVFLFVASKLTGAKKVRRT-ETWGCGIELTAEMEYTAASFSQPVRRTYRAILQPK 588 Query: 599 QQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLY 658 +++ RL + P ++ + P+ + +K QH+QSG LY Y Sbjct: 589 RKVKNNYRLLPYFDFHIHFDEHVRPVIEDFLYNPLRKTIIKTSKIWQHIQSGSINLYLGY 648 Query: 659 VVAALVVLLI 668 + LVVLL+ Sbjct: 649 IFITLVVLLV 658 >UniRef50_D0WGR4 Hydrogenase subunit n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WGR4_9ACTN Length = 675 Score = 459 bits (1182), Expect = e-127, Method: Composition-based stats. Identities = 290/667 (43%), Positives = 419/667 (62%), Gaps = 4/667 (0%) Query: 4 LQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVAR 63 + +L S+ + + +LFL A ++ + + ++ +++G + G Sbjct: 3 MTILLASIAVSVIGGFLALFLGKSAHAAKVVACLFGMGSALLAVLAGFQGV-IGQGACLS 61 Query: 64 FAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIA 123 A PF FAD TL ++ ++ ++ +I++L LY L+Y EY+ G AMG FMN+FIA Sbjct: 62 VATPFSFADFTLLLNPIAGLLLAIINVLAFAAFLYGLSYFDEYKENGLGAMGLFMNLFIA 121 Query: 124 SMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFL 183 SM L+V DNAFWF+V FE+MSL+S+FLV+ Q K SI G +Y +AH G ++IMI++ Sbjct: 122 SMNVLVVADNAFWFLVFFELMSLTSYFLVVVEQKKQSIKGGFMYLVMAHVGFLMIMISYF 181 Query: 184 LMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHAS 243 +M ++GS +FA++R P L S F+LAFFGFG KAGM+P HSWLP+AHPAAPS+ S Sbjct: 182 IMASQTGSFEFAAYRVHDFGPALGSLAFVLAFFGFGCKAGMVPFHSWLPQAHPAAPSNVS 241 Query: 244 ALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRL 303 ALMSG M+KIG+FGI+KV +DLL+ T LWWG+LV+ +GA+S++LGV+YAL E DIK+L Sbjct: 242 ALMSGGMIKIGVFGIIKVGLDLLSGTDCMLWWGLLVLVVGAVSSVLGVVYALGEHDIKKL 301 Query: 304 LAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAII 363 LA+ +VEN+GIILL VG+A VG+++ P L + LL ++H+LNHA+FKGLLFLGAG+++ Sbjct: 302 LAYHSVENIGIILLGVGLAFVGVAMDQPALAGLALLAGIYHMLNHAMFKGLLFLGAGSVL 361 Query: 364 SRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAV 423 T +MEKMG L MP TA LIG LAISAIPPLNGF+SEW+T+Q++FS + + Sbjct: 362 YATGTRNMEKMGGLIHAMPVTAMCFLIGSLAISAIPPLNGFVSEWFTYQAMFSAAFMGGT 421 Query: 424 ALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAA 483 ++ A V LAVTG LAV CFVK YG+TF G RS A +A+EVP +M +M++L+ Sbjct: 422 MIKAFAAFAAVALAVTGALAVTCFVKAYGVTFLGVGRSDAALKAKEVPASMTASMVILSI 481 Query: 484 LCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPL 543 +C+ + L A AP + +A + VASG A+ G + ++ L+ +LL+A Sbjct: 482 VCIFLGLGAPLCAPVLEGVAASVLGGSAVAVASGAAVTNGITDSVISTPLVAVLLIAAVF 541 Query: 544 LPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDP 603 + ++ RR D WACGY E M ++ V L+ R L Sbjct: 542 VALGIRSMFAKGGSSVRR--DPWACGYKSEGDMPVIATTFASEVKWVMGPLYAARDALVG 599 Query: 604 T-LRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAA 662 T + K + A+ E D+R++ P+ + R+AK Q +++GD RLY +Y+V A Sbjct: 600 TSPKFVKAFESLVGGAKVAETVGDKRLVDPVAAFVDRIAKLSQRIEAGDSRLYIVYIVVA 659 Query: 663 LVVLLIA 669 LV LLIA Sbjct: 660 LVALLIA 666 >UniRef50_Q609T5 Hydrogenase subunit n=1 Tax=Methylococcus capsulatus RepID=Q609T5_METCA Length = 748 Score = 455 bits (1171), Expect = e-126, Method: Composition-based stats. Identities = 225/641 (35%), Positives = 357/641 (55%), Gaps = 8/641 (1%) Query: 33 KLSGITSLVGGVIGIISGITQLHAGVTLVARFAPPFEFADLTLRMDSLSAFMVLVISLLV 92 ++ GV + +G+ QLHA + + + +R+D+LSAF ++V+ L V Sbjct: 106 RMVFALLTASGVSSLGAGLLQLHADAAVSGQLPFGLPWLHWHVRLDTLSAFFLVVLGLGV 165 Query: 93 VVCSLYSLTYMREYEGKGAA-AMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFL 151 + +Y Y R++ G+ + A+G F F+A M +L+ D+A+ F++ +E M++SS+FL Sbjct: 166 IAAGVYGPGYTRQFAGQYSFGALGLFTGSFVAGMEGVLIADDAYLFVIAWEAMTVSSYFL 225 Query: 152 VIARQDKTS-INAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRTLSLSPGLASAV 210 V+ + + S A LY + G++ I++AF ++ S S F ++R ++P +A Sbjct: 226 VVYQHEHASHRRAAFLYLLMGEVGAIAIILAFGILAAASHSFAFDAWRDAHVTPAWGTAA 285 Query: 211 FLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTG 270 FLLA GFG KAG++PLH+WLP AHPAAP+H S LMSGVM+KI ++G+L+ A DLL Sbjct: 286 FLLALAGFGMKAGLVPLHAWLPEAHPAAPAHVSGLMSGVMLKIAVYGLLRFAFDLLGD-- 343 Query: 271 LPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHD 330 + +WG +V+ +G SA LG+LYA+ + D+KRLLA+S++EN+GI+ + +G+ MV + Sbjct: 344 VQWYWGAIVLGLGTGSAALGILYAVVQSDLKRLLAYSSIENMGIVFMGLGLCMVFIGKGH 403 Query: 331 PLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLI 390 L ++GL+ AL+H+LNH+LFK LLFL AG+++ + H HD+E MG L KRMP TA L Sbjct: 404 VQLGLIGLVAALYHVLNHSLFKNLLFLAAGSVVHQTHRHDLEHMGGLIKRMPVTAGLFLA 463 Query: 391 GCLAISAIPPLNGFISEWYTWQSLFSLSRV-EAVALQLAGPIAMVMLAVTGGLAVMCFVK 449 G +AI+ +PPLNGF+SEW T+Q+ + V + L+ +A +LA T +A CFVK Sbjct: 464 GSVAIAGLPPLNGFVSEWLTFQAALQAASVIDNGILRSMVSVAAAILAFTAAVAAACFVK 523 Query: 450 MYGITFCGAPRSTHAEEAQEVPNT-MIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTN 508 +YG+ F G PR + A EV ++ M+ A +LA LC+L+ + +W+ + I Sbjct: 524 LYGVAFLGQPRERRSAHAHEVSHSGMLWAPAMLAGLCLLLGVLPTWVLDAMRPITRQLLG 583 Query: 509 TPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWAC 568 + ++ L L+LLAM L L R AA R AW C Sbjct: 584 ETLTSASARGWLWLTPGGVSTASYSAPLVLLAMALAWWLLRRLERRGPAADVRRAPAWDC 643 Query: 569 GY-GWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGL-AHVTARAQSTEPFWD 626 G+ G M + QP+R +F+ ++ + P L + Sbjct: 644 GFGGLSPRMQYTAAAFAQPVRRIFAPVWETVETSTPETAAANPLQVTALSYRLEIGDRSW 703 Query: 627 ERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLL 667 + P+ + LA++ +Q+G R+Y Y L+VLL Sbjct: 704 RWLYLPLTRVVEDLARQTARIQTGQVRIYIAYSFMTLIVLL 744 >UniRef50_B1ZSE3 NADH dehydrogenase (Quinone) n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZSE3_OPITP Length = 683 Score = 455 bits (1170), Expect = e-126, Method: Composition-based stats. Identities = 248/670 (37%), Positives = 370/670 (55%), Gaps = 15/670 (2%) Query: 14 YLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVA---RFAPP-FE 69 Y + +L + +RLA + + + G+++ + L GV F PP F Sbjct: 17 YAAGVVLALLCVRRERLAALVGFGAPALAALAGLVAALRLLLGGVGAPLPRFEFIPPLFP 76 Query: 70 FADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGA-AAMGFFMNIFIASMVAL 128 F LT+R+D+L AF ++V SL + S+YS+ + G+G + N + + + Sbjct: 77 FLTLTVRVDALGAFFLVVSSLAGLAISIYSIGAAKGLAGRGNVGVLAALFNALLLATALV 136 Query: 129 LVMDNAFWFIVLFEMMSLSSWFLVIA-RQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGR 187 + + + F+ +E+M+L+++ LV + + AG+LYF ++H + +++ LL+ + Sbjct: 137 FMAGDLWLFLGAWELMALTAYGLVSFAHEQPETRRAGVLYFIMSHLDAACVVLGLLLLFQ 196 Query: 188 ESGSLDFASFRTLS--LSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASAL 245 SGS F S + ++PG A F+L GFG KAG++PLH WLP AHP APS+ SA Sbjct: 197 ASGSTSFDSLHAIGGHMAPGKRDAAFVLFLLGFGIKAGIVPLHIWLPAAHPVAPSNVSAF 256 Query: 246 MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLA 305 MSGV++K GI+G+++V+ D L P WWG+ V+ IG +SA+LGVLYAL E D+KRLLA Sbjct: 257 MSGVLIKSGIYGLIRVSFDFLGTP--PGWWGMTVLVIGTVSAVLGVLYALMEHDLKRLLA 314 Query: 306 WSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISR 365 + ++EN+GIIL+ VG +++ L L + L+ L+H +NHA FKGLLFLGAGA++ Sbjct: 315 YHSIENIGIILMGVGTSLLFLHSGHTALATLALIAGLYHTINHATFKGLLFLGAGAVLHA 374 Query: 366 LHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVAL 425 HTH+ME+MG LAKRMP TA LIG +AISA+PPLNGF+SEW T+QSL Sbjct: 375 THTHNMEEMGGLAKRMPQTAFCFLIGAVAISALPPLNGFVSEWLTYQSLLQGFDASQSLE 434 Query: 426 QLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALC 485 +L P++ MLA+TG LA CFVK YG+TF PRS A AQE + M +L C Sbjct: 435 RLVLPLSGAMLALTGALAAACFVKAYGVTFLAQPRSEAAAHAQEAGPMLRFGMAVLVVAC 494 Query: 486 VLIALSASWLAPKIMHIAHAFTNTPPA---TVASGIALVPGTFHTQVTPSLLLLLLLAMP 542 VL+ L + + + + T + ++A+G+ L T T T S L L+LLA+ Sbjct: 495 VLLGLFPTTVIRLLDPVTQLLTGQQLSGQLSLANGLVLTSLTEKTG-TISTLGLVLLAIG 553 Query: 543 LLPGLYWLWCRSRRAAFRRTGDAWACGY-GWENAMAPSGNGVMQPLRVVFSALFRLRQQL 601 LLP + L R R W CG G M + G +P+R++F ALF R+ + Sbjct: 554 LLPIPFVLRWVLARNTRTRRAPTWDCGLRGLTPQMEYTATGFSKPIRMIFKALFLPRRDV 613 Query: 602 DPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVA 661 + A E ++ RP+ R ++ I+ LQ+G Y LY+ Sbjct: 614 QREYDFSPHFATKLQFESHVEEVFESHFYRPVRLQILRASRRIRTLQAGSIHAYLLYMFV 673 Query: 662 ALVVLLIAIA 671 LV LL+ Sbjct: 674 TLVALLLFAR 683 >UniRef50_Q0W2B5 Hydrogenase, membrane subunit 4-like protein (HycC-like) n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W2B5_UNCMA Length = 681 Score = 453 bits (1165), Expect = e-125, Method: Composition-based stats. Identities = 249/682 (36%), Positives = 385/682 (56%), Gaps = 14/682 (2%) Query: 1 MDALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTL 60 + L ++ L + ++ L A G ++ + ++ + L G+ Sbjct: 3 VKLEYLFAALVLTSLIGACGAIVLRRNKYCAYVAFGAATMTSVIGATLAAVILLGPGLNP 62 Query: 61 VAR------FAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGA-AA 113 F +++ +D LSAF +L IS++ S+YS+ Y REY GK + Sbjct: 63 ELSPGLRMILPMYTPFGEMSFTVDPLSAFFILAISIVGFAVSVYSIGYSREYVGKYSIGL 122 Query: 114 MGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIA-RQDKTSINAGMLYFFIAH 172 +G N+F+ SM+ ++ NA F++++E+MS+ S+ LV+ + K +++AG LY + H Sbjct: 123 LGSIFNLFLLSMILVVTAGNAIQFLIVWEVMSILSYLLVVYENRKKEAVSAGFLYIVMTH 182 Query: 173 AGSVLIMIAFLLMGRESGSLDFASFRTL--SLSPGLASAVFLLAFFGFGAKAGMMPLHSW 230 G+ I + FLL+ +GS DFASF+ +L + S F+L GFG KAG+MPLH W Sbjct: 183 LGTAFITVGFLLLATTTGSFDFASFKGAGAALPELVKSLAFVLFLIGFGTKAGIMPLHVW 242 Query: 231 LPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLG 290 LP AHPAAPS+ SALMSGVMVK I+ +++ + L WWG+LV+ + ++SA+LG Sbjct: 243 LPYAHPAAPSNVSALMSGVMVKTAIYMLIRCIFEFLGVADT--WWGLLVLLVASLSAVLG 300 Query: 291 VLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHAL 350 VL+AL E D+KRLLA+STVENVGIIL+A+G +MV +S L + L+ ALFH NH+L Sbjct: 301 VLFALNETDLKRLLAYSTVENVGIILIAIGASMVFVSYGLKELAALALIAALFHAFNHSL 360 Query: 351 FKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYT 410 FK LLF+GAG+++ +HT ++E MG LAKRMPWT +G L+ISAIPPLNGF+SEW Sbjct: 361 FKALLFMGAGSVLYAVHTKNIELMGGLAKRMPWTGVFFFVGALSISAIPPLNGFVSEWLI 420 Query: 411 WQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEV 470 +QSL + +++ P+ + MLA+TG LA CFV+ YGI F APR+ HA EA++V Sbjct: 421 FQSLLLSFNFPEMIVKILIPVTIGMLALTGALAAACFVRAYGIAFLAAPRTEHAAEAKDV 480 Query: 471 PNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPAT-VASGIALVPGTFHTQV 529 P TM+ M +LA LCV+ L + ++ P I + T A+ + GI + P Sbjct: 481 PVTMLAGMAILAVLCVVTGLMSVFIVPAIDSVTATIIGTSVASKMTYGIVMEPVVTSFSG 540 Query: 530 TPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRV 589 L + L+ + LLP +Y + GD W CG + +G + + + Sbjct: 541 MSPLAIGALM-IVLLPAVYLITRYYGGRRKIVLGDTWDCGTRLSHRNEYTGTAYAKSINM 599 Query: 590 VFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQS 649 +FSA++R ++L + ++ A TEP +++ + P+ +LA+ + +Q+ Sbjct: 600 IFSAIYRPSKELVARPTASPYISKELTYADHTEPLFEKYLYNPLAGFVVKLARRLSFIQT 659 Query: 650 GDFRLYCLYVVAALVVLLIAIA 671 G + Y Y+ LV+LLI Sbjct: 660 GSIQAYLTYIFITLVLLLIIFR 681 >UniRef50_C8PJ79 ATP-binding protein n=1 Tax=Campylobacter gracilis RM3268 RepID=C8PJ79_9PROT Length = 657 Score = 450 bits (1157), Expect = e-124, Method: Composition-based stats. Identities = 217/657 (33%), Positives = 356/657 (54%), Gaps = 15/657 (2%) Query: 13 LYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAPPFEFAD 72 L++ +++ S+ L + A+K+ + + + + + V + Sbjct: 7 LFIVSAVISILLYCAPKTAVKVGFGLGAISCFYAMCHFVANMGVSDSFVLGGTFLYAPK- 65 Query: 73 LTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGA-AAMGFFMNIFIASMVALLVM 131 + L F V+ + S+Y ++Y EY GK N FI SM+ ++ Sbjct: 66 --FALSPLGNFFSFVVVFIGFASSVYGMSYAEEYIGKANIGVFACLFNTFILSMLLVISA 123 Query: 132 DNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGS 191 DN F F VL+E+M+L S FL+I K ++ A M+Y IA G+ I L++ +GS Sbjct: 124 DNVFCFAVLWELMTLISSFLIIVNDGKGTLKAVMVYLGIAQIGAFCITCGLLIIANYAGS 183 Query: 192 LDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMV 251 +FA + +++ G + A F+L GFG+KAGM P H WLP+AHPAAPS+ SALMSGVM+ Sbjct: 184 FEFAEWGKVNMPMGASVAAFILFLVGFGSKAGMWPFHVWLPQAHPAAPSNVSALMSGVMI 243 Query: 252 KIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVEN 311 K+ +F ++K + L L +++G+ V+ +GA S+L GVLYAL + D K LLA+ +VEN Sbjct: 244 KVALFTLVKFTLFL----PLSIYFGLAVLILGAASSLFGVLYALCQHDFKALLAYHSVEN 299 Query: 312 VGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDM 371 +GIILL +G + G++ + L VG L +H++NHA+FKGLLFL AG++I HT +M Sbjct: 300 IGIILLGLGTGIYGVAAGNVTLAAVGFLAGCYHVVNHAIFKGLLFLCAGSVIHATHTQNM 359 Query: 372 EKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPI 431 + +G LAK+MP TA IG + I+A+PP+NGF+SEW+T+Q + ++ + ++ A + Sbjct: 360 DVLGGLAKKMPLTAVGMFIGIMGIAALPPVNGFVSEWFTYQGMLQGAKESGIFIRYAFSL 419 Query: 432 AMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHA-EEAQEVPNTMIVAMLLLAALCVLIAL 490 A+V LA+TG L M +K+Y + F G PR E A+E P M++ M++L CV + Sbjct: 420 AVVALALTGVLVGM-HLKLYAVIFAGTPRDEKIWENAKESPLGMVLGMIILMIGCVGFGV 478 Query: 491 SASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWL 550 A ++ IM ++ T+ + G + + + V+ L+ ++L + LLP + Sbjct: 479 GAHFIVDYIMQAVNSITSNREFVASLGASSITSPLGSIVSTPLIAVILCSTMLLPFIILA 538 Query: 551 WCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKG 610 ++ R R T D WACG+ + M +G LR + LFR ++ G Sbjct: 539 VMKANRDKPRET-DPWACGFKYSPRMQMTGGPFTGDLRKIMDWLFRGHKR----RIEQNG 593 Query: 611 LAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLL 667 + W + +P++ ++++A +I +QSG LY LY++ L +L Sbjct: 594 YFGPIEYHNHPQDIWWTMIYQPVIDWSKKVADKIGIIQSGYANLYTLYILIYLCAVL 650 >UniRef50_Q0F380 NADH dehydrogenase subunit N n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F380_9PROT Length = 633 Score = 439 bits (1130), Expect = e-121, Method: Composition-based stats. Identities = 229/642 (35%), Positives = 351/642 (54%), Gaps = 12/642 (1%) Query: 32 IKLSGITSLVGGVIGIISGITQLHAGVTLVARFAPPFEFADLTLRMDSLSAFMVLVISLL 91 + +SG+++++GG+ G+++ T L + L + + R+D LSAF +LVI L Sbjct: 2 LAISGLSAMIGGIQGLLTEPTSLILPLGL--------PWLPMHFRVDGLSAFFLLVIGTL 53 Query: 92 VVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFL 151 ++ ++YS Y++ + GA + F+ +F+ M+ +++ D+AF F++ +EMMS+SS+FL Sbjct: 54 LLPVAIYSQGYLKGEKRLGA--LAVFLPLFVLGMLGVVIADDAFTFMLFWEMMSVSSYFL 111 Query: 152 VIARQDK-TSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRTLSLSPGLASAV 210 V ++ + AG +Y +AH +LI+ F ++ SGS +F+ R L P A+A Sbjct: 112 VTFEHERLENRKAGFIYLLMAHLAGLLILGGFAVLYAASGSFEFSVMRAAHLFPFWATAA 171 Query: 211 FLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTG 270 FLL FGFG KAG++P+H WLP AHP APS+ SALMSG+M+K+ +FG L+V DL+ Sbjct: 172 FLLVAFGFGTKAGVVPMHGWLPDAHPVAPSNVSALMSGIMLKVAVFGFLRVVWDLIGPGD 231 Query: 271 LPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHD 330 WWG LV+ G+ SA+ GVL+AL + D+KRLLA+ ++EN+GIIL+ +G+ M+ Sbjct: 232 FQWWWGALVLTAGSASAVSGVLFALQQHDLKRLLAYHSIENIGIILIGLGLGMLLAHFGH 291 Query: 331 PLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLI 390 PLL +GL+ L+H +NHALFKGLLF+GAGA++ T DME MG L RMP TA L+ Sbjct: 292 PLLAALGLIAGLYHTINHALFKGLLFMGAGAVLHVTGTRDMETMGGLIHRMPATALFFLV 351 Query: 391 GCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKM 450 C++ISA+PP NGF+SEW T+Q+ ++ L P + MLA+ G LA CFVK+ Sbjct: 352 ACVSISALPPFNGFVSEWLTFQTALMAPQLGGALLTAIVPFSAAMLALAGALAAACFVKV 411 Query: 451 YGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTP 510 +G+ F G RS H A EV M + M + A LC+L+ L P + I + + Sbjct: 412 FGVVFLGHARSEHVAGAHEVDGWMKLGMAIPALLCLLLGLLPVMFIPLMDAIPASLLHVS 471 Query: 511 PATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGY 570 + T S + LA L G W + R G W+CG Sbjct: 472 LGAHLYEHGWLWLTPVDATHASYSAPVALAGMLGVGGLVYWWLHPKGCRIRRGALWSCGN 531 Query: 571 GWEN-AMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERV 629 + M + QPLR +F+ + R + + +K L + Sbjct: 532 PHIHARMQYNATAFSQPLRRIFAGVLRPEEHIHVERPAHKLLTRRVRYTVHVGDPAVRHL 591 Query: 630 IRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLIAIA 671 +P+ T LAK ++H Y + A ++ LL+A A Sbjct: 592 YQPLARLTLGLAKRVRHEHQRGIHAYLAWTFATILFLLVAFA 633 >UniRef50_A7GWM7 ATP-binding protein n=4 Tax=Epsilonproteobacteria RepID=A7GWM7_CAMC5 Length = 655 Score = 438 bits (1128), Expect = e-121, Method: Composition-based stats. Identities = 214/662 (32%), Positives = 362/662 (54%), Gaps = 21/662 (3%) Query: 12 ILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQL--HAGVTLVARFAPPFE 69 +L++ +++ S+ L G + A+K+ S + + + + + TL+ F + Sbjct: 6 MLFVVSAVISILLYGAPKAAVKVGFGLSALSCFYAMCHFVANMGMNDSFTLIGDFLYAPK 65 Query: 70 FADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGA-AAMGFFMNIFIASMVAL 128 FA + L F V+ + S+Y ++Y EY K + FI SM+ + Sbjct: 66 FA-----LTPLGNFFSFVVVFIGFASSVYGMSYADEYVKKANVGVFACLFSTFILSMLLV 120 Query: 129 LVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRE 188 + DN F F+VL+E+M+L S FL++ K ++ A M+Y IA G+ I L++ Sbjct: 121 ISADNVFCFVVLWELMTLVSSFLILVNDGKNTLKAVMVYLGIAQIGAFCITCGLLIIAYY 180 Query: 189 SGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSG 248 +GS +F++F + + G ++ F+L GFG+KAGM P H WLP+AHPAAPS+ SALMSG Sbjct: 181 AGSSEFSAFMNVKMPMGASATTFILFLVGFGSKAGMWPFHVWLPQAHPAAPSNVSALMSG 240 Query: 249 VMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWST 308 VM+K+ +F ++K + L L +++G+ ++ +GA S+L GVLYAL + D K LLA+ + Sbjct: 241 VMIKVALFTLVKFTLYL----PLSVYFGLAILILGAASSLFGVLYALCQHDFKALLAYHS 296 Query: 309 VENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHT 368 VEN+GIILL +G + GL+ + L +G L +H++NHA+FKGLLFL AG++I HT Sbjct: 297 VENIGIILLGLGTGIYGLAAGNMTLAAIGFLAGCYHVVNHAIFKGLLFLCAGSVIHATHT 356 Query: 369 HDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLA 428 +M+ +G LAK+MPWTA IG + I+A+PP+NGF+SEW T+Q + + +++ ++ A Sbjct: 357 QNMDILGGLAKKMPWTAVGMFIGIMGIAALPPVNGFVSEWLTYQGMLQGAMGDSILVRYA 416 Query: 429 GPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHA-EEAQEVPNTMIVAMLLLAALCVL 487 +++V LA+TG L M +K+Y + F G PR E A+E P M++ M++L CV Sbjct: 417 FTLSVVALALTGVLVGM-HLKLYAVIFAGTPRDKKIWENAKESPIGMVLGMVVLMIGCVG 475 Query: 488 IALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGL 547 + A+ + IM ++ T + G + + V+ L+ ++L + +LP + Sbjct: 476 FGVGANVIVDYIMKAVNSIT-VSGYDASLGSTAITSPLGSVVSTPLIAIILCSTMILPFI 534 Query: 548 YWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRL 607 ++ R+ R T D WACG+ + M +G LR + LF+ +++ + Sbjct: 535 ILAVMKANRSKPRET-DPWACGFKYSPRMQMTGGPFTGDLRKIMEWLFKGNKKV-----V 588 Query: 608 NKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLL 667 + + W + P++ + A +I +QSG +Y LY++ L +L Sbjct: 589 TRNYFDAIEYHNHPKDIWWGMIYEPVIKWCMKFADKIGIVQSGYTNVYTLYILVYLCAIL 648 Query: 668 IA 669 Sbjct: 649 AI 650 >UniRef50_B8I2P9 NADH/Ubiquinone/plastoquinone (Complex I) n=2 Tax=Clostridium RepID=B8I2P9_CLOCE Length = 688 Score = 437 bits (1123), Expect = e-120, Method: Composition-based stats. Identities = 237/681 (34%), Positives = 375/681 (55%), Gaps = 19/681 (2%) Query: 6 LLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQL--HAGVTLVAR 63 L ++LY+ +L SL + + +LS +L+ + I +L V+ Sbjct: 9 LFIICIVLYMTGALTSLASYSSPKWSNRLSNSFALLASSLLTFLMIYKLIYSRDVSTKLD 68 Query: 64 FAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREY-EGKGAAAMGFFMNIFI 122 F F + +DSLSAF +++IS++ V+ SL+S TYM Y K + G N+FI Sbjct: 69 FNTNIPFLSIEFNIDSLSAFFIMIISIVAVIVSLFSYTYMSHYFSKKNISVFGCLYNLFI 128 Query: 123 ASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSI-NAGMLYFFIAHAGSVLIMIA 181 SMV L+ N F+V +E+MSL S+FLVI +K + AG +Y + + G+V IM A Sbjct: 129 VSMVLLVASSNMLLFLVFWELMSLISFFLVIYEHEKDEVQKAGRIYIIMTYIGTVCIMAA 188 Query: 182 FLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSH 241 F+L+ +GS + +S S+ G A+ +FLL GFG KAG++P+H WLP AHP APS+ Sbjct: 189 FVLIAAYTGSFNLSSINPQSIPHGSANIIFLLLLVGFGTKAGIIPVHIWLPYAHPVAPSN 248 Query: 242 ASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQ-DI 300 SALMSGVM+K+ I+G+ + ++L +GL WWG+ V+ IG SAL+G+ Y++A +I Sbjct: 249 ISALMSGVMIKMAIYGLFRFIFNILPVSGL--WWGVAVLCIGIASALIGIAYSVASTTNI 306 Query: 301 KRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAG 360 KRLLA+S++EN+GIIL +G+ M+ + + L + L L H LNHA+FK LLF+GAG Sbjct: 307 KRLLAYSSIENMGIILAGIGMMMIARASENYPLLSLSLTATLLHTLNHAVFKSLLFMGAG 366 Query: 361 AIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFS---- 416 I HT +MEK+G L K+MP + IGCL+ISA+PP NGFISE+ ++++ S Sbjct: 367 TIQYSTHTKNMEKLGGLIKKMPAASVFIFIGCLSISAVPPFNGFISEFMIFRTIISSISY 426 Query: 417 LSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIV 476 + E L + +A LA+TG L CFVK +GI+F G PRS AE A+E M+ Sbjct: 427 FAPSENFLLVVILMVAAAALALTGALVAFCFVKFFGISFLGMPRSLKAESAKEPGKPMLA 486 Query: 477 AMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTF----HTQVTPS 532 A+ A LC+L+ + + I + N +A+ +L+ + ++ ++ S Sbjct: 487 ALASAAVLCLLLGILPKYAIRLIDGVGSQLINI--KMLATDWSLLSPQYYPVGNSSLSIS 544 Query: 533 LLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGY-GWENAMAPSGNGVMQPLRVVF 591 L +L + L L + R+ + W CG+ M S G + LR++F Sbjct: 545 SGLTAILLVLLGGLLLVVVMALRKRTSVERYNTWDCGFTKLNPKMQYSATGFSKSLRIIF 604 Query: 592 SALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQH-LQSG 650 F+ + L+ T + ST F+++ + PI+S + +++I+ +Q+G Sbjct: 605 RGFFKPGRDLEITEGIAPYHIKEGKYTTSTVRFFEKYLYVPIISTIIKFSRKIRFTVQTG 664 Query: 651 DFRLYCLYVVAALVVLLIAIA 671 Y +Y A+V++L+ + Sbjct: 665 SIHAYLMYFFVAMVLMLLYYS 685 >UniRef50_A5G8U2 NADH dehydrogenase (Quinone) n=13 Tax=Desulfuromonadales RepID=A5G8U2_GEOUR Length = 669 Score = 429 bits (1104), Expect = e-118, Method: Composition-based stats. Identities = 227/670 (33%), Positives = 345/670 (51%), Gaps = 16/670 (2%) Query: 2 DALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLV 61 D L+ L + + LFL KL+ + + G+ G ++ Sbjct: 10 DPAMLVAIGATLAALSGVPGLFLKDTPDTGQKLATALVALAALAGLSGAFIFFLHGTPVI 69 Query: 62 ARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEG-KGAAAMGFFMNI 120 + F + +D LSA +L+I L+ + CS+Y+ Y + + + FF + Sbjct: 70 YTISCSLPFGPCEIGLDHLSAVFLLIIFLISICCSIYATGYWPAASNQRTSRKLTFFFGL 129 Query: 121 FIASMVALLVMDNAFWFIVLFEMMSLSSWF-LVIARQDKTSINAGMLYFFIAHAGSVLIM 179 A++V L++ ++ F++ +E+M+LS++F L AG++Y H G++ + Sbjct: 130 LTAALVLLVIARDSILFLMAWEVMALSAYFVLTTEDHKPEVREAGIIYMVATHTGTLALF 189 Query: 180 IAFLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAP 239 F L+ + S F++ ++ +P LA+A+F A FGFG KAG+MPLH WLP AH AP Sbjct: 190 AMFSLLKGAAASHQFSAMTAINPAPPLAAAIFCTALFGFGLKAGLMPLHIWLPSAHATAP 249 Query: 240 SHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQD 299 SH SA+MSGVM+K GI+GI++V P+WWGI ++ G +SA+LGV +AL + D Sbjct: 250 SHISAIMSGVMIKTGIYGIIRVLSFF---PQPPIWWGITLLVAGIVSAVLGVAFALGQHD 306 Query: 300 IKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGA 359 +KRLLA+ ++EN+GII + +GVA++G + PLLTV+G+ GAL H LNHALFK LLFLGA Sbjct: 307 LKRLLAYHSIENIGIIFMGIGVAVIGQATGQPLLTVLGMAGALLHTLNHALFKSLLFLGA 366 Query: 360 GAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSR 419 GA+I HT ++++MG LAK MPWTA L+G +AI +PPLNGF+SE+ + F Sbjct: 367 GAVIHATHTREIDRMGGLAKAMPWTAILFLLGAVAICGLPPLNGFVSEYLIYLGFFGGVN 426 Query: 420 VEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAML 479 + A +A LA+ G LAV CFVK++GI F GA RS E Q+ M M+ Sbjct: 427 TVSGPAVPAMALAAPSLALVGALAVACFVKVFGIVFLGARRSREIEPLQDAGWPMRAPMI 486 Query: 480 LLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLL 539 LL ALCV+I L +A + +++ T T + + P + + +L L Sbjct: 487 LLGALCVIIGLFPQLVARLLQPTIYSWAPTLVITGQTIPSAAPLGW-------ITVLGLA 539 Query: 540 AMPLLPGLYWLWCRSRRAAFRRTGDAWACGY-GWENAMAPSGNGVMQPLRVVFSALFRLR 598 + L L + + R + T W CGY M S + + + +F+ R Sbjct: 540 LLTLGGLLAFDFYRRIKQETVGTSGTWGCGYLKPSPRMQYSASSFAEMIVKLFAGALRPH 599 Query: 599 QQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLY 658 + + + A E I P A I+ LQ G LY LY Sbjct: 600 VE---KPDITGPFPQRSRFASHVPEAVLELGIVPFFKAVDERFATIRRLQHGQLHLYILY 656 Query: 659 VVAALVVLLI 668 V L +LL+ Sbjct: 657 VFITLCLLLV 666 >UniRef50_Q1Z852 NADH dehydrogenase subunit N n=3 Tax=Vibrionaceae RepID=Q1Z852_PHOPR Length = 646 Score = 428 bits (1100), Expect = e-118, Method: Composition-based stats. Identities = 279/607 (45%), Positives = 394/607 (64%), Gaps = 10/607 (1%) Query: 1 MDALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTL 60 M+ L L+ ++LI Y A+L SL ++ +++++G+ S GG+ G+++G+T + G L Sbjct: 1 MNPLILVLFALICYAIAALVSLVGRKQEQESLRIAGVISAFGGLFGVLAGLTTIVCGDDL 60 Query: 61 VARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNI 120 + + MD LSA MV+VIS++ + S+YS+ Y++EY GKG + N+ Sbjct: 61 ADKL-------GRIVNMDMLSALMVVVISVVTMAASVYSINYLKEYLGKGGWKINILFNV 113 Query: 121 FIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMI 180 F A+M AL+V N FIVL E++SL+SW +VI+ S AG+ YF H SVLIM Sbjct: 114 FAAAMTALVVSANVMLFIVLMEIISLASWLIVISDGSVASKKAGLQYFIADHVASVLIMA 173 Query: 181 AFLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPS 240 AFL++ ++ S +F++F ++ AS VFLLA GFG KA + H WL +A+P APS Sbjct: 174 AFLILSLQANSYNFSAFTHHPVTGTTASLVFLLALAGFGIKAAGIGFHGWLAKAYPIAPS 233 Query: 241 HASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDI 300 + S L+S VMVKIGI+GILKV + L T LWWG LV+ GA+S++LGV+YALAE DI Sbjct: 234 YCSTLISCVMVKIGIYGILKVGVLFLGAT--QLWWGFLVLIFGALSSVLGVMYALAEHDI 291 Query: 301 KRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAG 360 KRLLA+ T+EN+GIIL+ VGV+M+G++ H P L ++GLLGAL+HLLNHA+FKGLL LG+G Sbjct: 292 KRLLAYHTIENIGIILIGVGVSMIGIASHHPTLALLGLLGALYHLLNHAVFKGLLCLGSG 351 Query: 361 AIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRV 420 +I+ R+HT DM+KMG L K M TA LIG LAI A+PPLNGF+SEW+ +QSLFSL + Sbjct: 352 SIVYRMHTKDMDKMGGLGKTMSKTAITFLIGTLAICALPPLNGFVSEWFIYQSLFSLGKT 411 Query: 421 EAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLL 480 +V LAGP MVMLA+TG LA MCFVK+YGI F GAP++ A +EV MI A Sbjct: 412 GSVVNMLAGPFGMVMLALTGALACMCFVKVYGICFAGAPKTEQAATTREVGPAMITATSA 471 Query: 481 LAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQV-TPSLLLLLLL 539 LA LC ++ + + W+AP IA + + P +VA+G+A+ P + + ++ + L+ Sbjct: 472 LAVLCAVLGIGSPWIAPYFSAIASSILHIAPVSVANGMAVYPVAADQAILSTPVIAIALV 531 Query: 540 AMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQ 599 + L+P R RR A R+ GD WACGY +E+ M S GV +P+R +F ++ R Sbjct: 532 LLTLVPATLLYAFRQRRLARRQQGDPWACGYQYEHRMTVSAAGVTRPMRHMFGFIYNNRP 591 Query: 600 QLDPTLR 606 Q R Sbjct: 592 QHSLIER 598 >UniRef50_B1ZSD9 NADH dehydrogenase (Quinone) n=2 Tax=Bacteria RepID=B1ZSD9_OPITP Length = 662 Score = 425 bits (1093), Expect = e-117, Method: Composition-based stats. Identities = 204/635 (32%), Positives = 324/635 (51%), Gaps = 17/635 (2%) Query: 39 SLVGGVIGIISGITQLHAGVTLVARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLY 98 +L+G ++G L +G R +L +R+D++SAF +++++++ S+Y Sbjct: 32 TLLGAAAAFVAGARVLVSGAAWDWRSTWVLGGENLHVRLDAVSAFFLVLLAVVGGAASVY 91 Query: 99 SLTYMREYEGKGAAAMG-FFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQD 157 S Y + +A G + + +A+M A+LV N F++ +E+ ++S +FL+ + Sbjct: 92 SREYWSDRAHPRSARSGRAWWTLLLATMGAVLVAANGLHFLIAWELFAVSGYFLITRERQ 151 Query: 158 KTSINAG-MLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFF 216 + + A LYF +HAG++ + F L+ +GS D + + + +F LA Sbjct: 152 RREVRAAGWLYFAASHAGTLCLFGFFTLLAARTGSWDLGAMQ----DRRELAPLFWLALV 207 Query: 217 GFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWG 276 GFG KAG+ PLH WLP AH APSH SA++SGV +K+GI+G+++ + +P+ G Sbjct: 208 GFGVKAGLFPLHIWLPSAHANAPSHVSAILSGVALKMGIYGLVRFS----GWLPVPVAAG 263 Query: 277 ILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVV 336 ++ +G SA+LGV +AL + D+KRLLA+ +VEN+GIIL+ +G A+V + +P + Sbjct: 264 WVIALLGVASAVLGVAFALGQHDLKRLLAYHSVENIGIILIGLGFALVATANGEPAWGRL 323 Query: 337 GLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAIS 396 L G L H+ NH LFK LLFLGAG+++ T +M ++G L + MPWTA +G +AIS Sbjct: 324 ALAGGLLHIWNHGLFKALLFLGAGSVLHATGTREMSRLGGLWRTMPWTAGCFTLGAVAIS 383 Query: 397 AIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFC 456 +PPLNGF+SEW + LF + + A P A ++L +TG LA+ CF K+ G+ F Sbjct: 384 GLPPLNGFVSEWLVFLGLFDAAGAGGLPAWAAVP-AAILLGMTGALALACFAKVCGVVFL 442 Query: 457 GAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVAS 516 G PRS AE A E M MLLLAA CV I L+ + P + H A+ VA Sbjct: 443 GLPRSAVAEHAHESGPLMRGPMLLLAACCVAIGLAPVFFWPALAHAIDAWRPAWSGAVAL 502 Query: 517 GIALVPGTFHTQVTP--SLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWE- 573 + + P +L + L L W+ R R W CGY Sbjct: 503 ANDAGGARLNPEQAPLAALGACHVALAGLGVVLAWVLWRQVRRNGVTRFMTWDCGYAAPT 562 Query: 574 NAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPI 633 M + + L FS + R + ++ R T E VI P+ Sbjct: 563 PRMQYTAGSFAEILTGWFSWILRPQAHVE---RPVGPFPKRAEHRVHTPETVLEFVIEPV 619 Query: 634 VSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLI 668 ++ ++ LQ G + Y LY+ +V + + Sbjct: 620 GRVVLAISGAVRRLQHGRLQFYILYLFVGVVAIAL 654 >UniRef50_B6AS28 NADH dehydrogenase (Quinone) n=3 Tax=Leptospirillum RepID=B6AS28_9BACT Length = 686 Score = 421 bits (1083), Expect = e-116, Method: Composition-based stats. Identities = 227/670 (33%), Positives = 358/670 (53%), Gaps = 18/670 (2%) Query: 2 DALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLV 61 L L L ++ L G + A LS + L+ ++ I+G+ L V Sbjct: 10 TPLFLAELGLAGWILLGALGAVLAGHGKKASALSFGSLLLPALLASIAGVDILIHPVPQT 69 Query: 62 ARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIF 121 + L +D LS F + V+ + + L+++ + R+ + + F++ +F Sbjct: 70 RDLPFGWPGIPFRLALDPLSGFFLAVLGFVSIPVLLFAIGFFRDDSVRKTRWVLFWLPLF 129 Query: 122 IASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSIN-AGMLYFFIAHAGSVLIMI 180 + +M +L+ D+ F+V +E M+LSS+FLV+ + + AG LY +A G+ LI++ Sbjct: 130 LGTMSGVLLADDVLTFLVFWEGMALSSFFLVVTDISEEGVRKAGFLYLLMAQIGTGLILL 189 Query: 181 AFLLMGRESG------SLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRA 234 +F L+ S SL FA L +SPG+A VF L+F GFGAKAG++PLH WLP A Sbjct: 190 SFFLLADGSSPDGGLSSLAFADLSRLPVSPGIAGWVFFLSFAGFGAKAGIVPLHVWLPEA 249 Query: 235 HPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYA 294 HP APS SALMSG+M+KI ++G+++V + LL + L + G+ V+AIG++SAL GVL+A Sbjct: 250 HPVAPSPVSALMSGLMLKIALYGMIRVDLGLLGVSHLQPFMGVAVLAIGSLSALFGVLHA 309 Query: 295 LAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGL 354 L + D KRLLA+ ++EN+GIIL+ G+ ++ + P+ V +LFH+LNHALFK L Sbjct: 310 LVQHDPKRLLAYHSIENIGIILIGFGLFLIFRTTGHPVPAAVAFSASLFHVLNHALFKSL 369 Query: 355 LFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSL 414 LFLGAG I+ + THD+ +G L + MP T+ L+G LAIS +PPLNGF+SEW T+Q+ Sbjct: 370 LFLGAGTILKKTGTHDLNDLGGLFRTMPATSFLFLVGALAISGLPPLNGFLSEWLTFQAA 429 Query: 415 FSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTM 474 + Q A ++ +LA++ L MCFVK+ G++F G RS A +E Sbjct: 430 LFAPSLSTFLFQSAVVLSAALLALSSALTAMCFVKVTGVSFFGQARSVRASLVREDRGFE 489 Query: 475 IVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVA---SGIALVPGTFHTQVTP 531 + AM +LA C+ + L S + + ++ + T P A + LVP + Sbjct: 490 LSAMAILALGCLGLGLFPSPVLSGLSSVSLSLTGQPLPFDAEKDPWLWLVPVSSSRAQYS 549 Query: 532 SLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYG-WENAMAPSGNGVMQPLRVV 590 LL LL + +L L+ R RT W CGY + M + + QP+R Sbjct: 550 PLL-LLASFLAVLAILHLRAVLGRSQRPVRTAPTWNCGYPVRTSRMQETADAFGQPVRHF 608 Query: 591 FSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSG 650 F+ FR+ + L + G + + +PFW + + P+VSA ++ + +++ Sbjct: 609 FAPFFRMERHL-----PSPGDDRPSYHLEVRDPFW-KGLYDPLVSALLCVSDAAETIRNR 662 Query: 651 DFRLYCLYVV 660 Y LY V Sbjct: 663 RISHYLLYSV 672 >UniRef50_B8FUM3 NADH dehydrogenase (Quinone) n=3 Tax=Desulfitobacterium RepID=B8FUM3_DESHD Length = 637 Score = 421 bits (1082), Expect = e-116, Method: Composition-based stats. Identities = 215/606 (35%), Positives = 329/606 (54%), Gaps = 16/606 (2%) Query: 69 EFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAA-AMGFFMNIFIASMVA 127 ++ D L+AF +LV+ L + SLY L YM++YEGK + + F+ SM Sbjct: 39 QWHGEGFSCDGLTAFFLLVLLLGQGIASLYGLGYMKDYEGKRSLLSFSLSWAAFLGSMAG 98 Query: 128 LLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTS-INAGMLYFFIAHAGSVLIMIAFLLMG 186 +L+++N F+F+ L+E+MSL S+ LVI +++S A +YF + H G+V ++ A L + Sbjct: 99 VLIVNNGFYFLFLWELMSLFSFLLVIYEHEESSNRRAAFIYFVMTHVGTVFLIAAVLYLY 158 Query: 187 RESGSLDFASFRTLS--LSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASA 244 ++GS + + ++ LSPG + +FL GFG KAG++P H WLP AHP APS SA Sbjct: 159 SKTGSFLYGDWAAITPTLSPGEKNGLFLCFLIGFGTKAGLVPFHIWLPYAHPVAPSPVSA 218 Query: 245 LMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLL 304 LMSGVMVKI ++ +++ LA + LWWG L++A+G +SA +G+LYA EQD+KRLL Sbjct: 219 LMSGVMVKIALYMMMRWVWLTLAP--MELWWGGLMLALGVLSAFIGILYACVEQDVKRLL 276 Query: 305 AWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIIS 364 A+STVEN+GI+ +A+G AM+ +L L V+ L +H ++H LFK LF+ AG II Sbjct: 277 AYSTVENMGILTMALGTAMIARTLGYSDLVVLALAAFFWHGIHHLLFKSGLFMAAGNIIQ 336 Query: 365 RLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLS-RVEAV 423 HT +++MG L K+MP T ++G + +SA+PPL GF EW + +L+ S +VE Sbjct: 337 ATHTKRLDQMGGLLKKMPRTGLWAMVGAVGLSALPPLGGFWGEWLLFHALWKTSVQVEGG 396 Query: 424 ALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAA 483 +LA P+++ LA LA+ VK + F G RS +A AQE+P V+M + Sbjct: 397 LFKLALPLSLAALAFISALALATMVKWFAGAFLGQARSANAANAQELPWPQTVSMAMAMM 456 Query: 484 LCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIAL-VPGTFHTQVTPSLLLLLLLAMP 542 L +L L L I H +T + + +AL + F +TP +LLL L ++ Sbjct: 457 LTLLATLYPQGLWKLISVPIHVLKDTSDSPLTDSLALPLWADFFNLITPYILLLGLFSVT 516 Query: 543 LLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQLD 602 L + +R W CG M +G G+ PLR+ + R +D Sbjct: 517 L--------YQLSARKRKRVAGTWNCGVPLTPRMQYTGLGITMPLRIALKKVLAFRPIID 568 Query: 603 PTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAA 662 + T +E RP + R A+ ++ LQ+G Y Y++ Sbjct: 569 KKFGETPYVLQSLHYRGRTREMTEEVFYRPAMKLLLRCAERVRILQTGSIHTYLAYILIT 628 Query: 663 LVVLLI 668 LVV+LI Sbjct: 629 LVVVLI 634 >UniRef50_Q12F20 NADH dehydrogenase (Quinone) n=37 Tax=Betaproteobacteria RepID=Q12F20_POLSJ Length = 674 Score = 417 bits (1072), Expect = e-115, Method: Composition-based stats. Identities = 207/620 (33%), Positives = 317/620 (51%), Gaps = 16/620 (2%) Query: 56 AGVTLVARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMG 115 G VA LR+DSLSA+ ++VI S ++ Y R+ EG + Sbjct: 64 PGTPEVAVLPIGLPDLPFHLRLDSLSAYFLMVIGAASAGISAFAAGYFRKGEGTSPGLLC 123 Query: 116 FFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQD-KTSINAGMLYFFIAHAG 174 ++F+ASMV +++ D+A+ F+V++E M+LSS+FLV A +AG LY +A G Sbjct: 124 LEYHVFLASMVGVVLADDAYSFMVMWETMALSSFFLVTANHRIPEVRSAGYLYITMARIG 183 Query: 175 SVLIMIAFLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRA 234 ++ I++ F ++ +G FA+ R + +P AS FLLA FGFGAKAG++PLH WLP A Sbjct: 184 AIAILLCFGVLQANTGDYTFANMRAQAPTPFWASLGFLLAVFGFGAKAGILPLHVWLPEA 243 Query: 235 HPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYA 294 HPAAPS SALMSGVM+ I+G+++V+ DLL WWG L++A+G +AL GV++A Sbjct: 244 HPAAPSPVSALMSGVMLNTAIYGLMRVSFDLLH--MRMWWWGGLLLAVGLATALFGVVFA 301 Query: 295 LAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGL 354 + D+KRLLA+S++EN+G++ + +G+ ++ + + + + L+H+ +HA FK L Sbjct: 302 AVQTDMKRLLAYSSIENMGLLFVGIGLTLIFSAYDMNPMAALAMTATLYHVASHACFKSL 361 Query: 355 LFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSL 414 LFLG G+++ ++ K+G L + MPW LIG LA + +PPL GF+SEW QS Sbjct: 362 LFLGTGSVLHATSERNLGKLGGLIRTMPWVGWLTLIGVLASAGLPPLGGFVSEWLLLQSF 421 Query: 415 FSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTM 474 + L + P+ ++A+ LA VK +G+ F G PR A + Sbjct: 422 LFTPSLPLPLLTMLIPVVAALIALVAALAGYTMVKFFGVIFLGQPREGKLAGAHDAGRWE 481 Query: 475 IVAMLLLAALCVLIALSASWLAPKIMHIAHAF--TNTPPATVASGIALVPGTF-HTQVTP 531 I M+ LA CV + L + I + + A G L P + P Sbjct: 482 ITGMVWLALGCVALGLLPTQFIQLIDPVTQQLVASGLGAKVAAGGWLLAPNSLEQASYGP 541 Query: 532 SLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWEN-AMAPSGNGVMQPLRVV 590 + LL +L L L W R R G WACG+ W N M + G QP+R + Sbjct: 542 VIFLLGILGSFALAYLLVRWLYHGRV---RRGLPWACGFPWGNARMQDTAEGFGQPIRQI 598 Query: 591 FSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSG 650 F F ++++L E + + PI LA+ I +Q G Sbjct: 599 FEPFFLMQRELPSPFDEQPR------YRVRVEDHFWRWLYVPIADLAAYLARLIGLMQQG 652 Query: 651 DFRLYCLYVVAALVVLLIAI 670 +Y LY L+ L+A+ Sbjct: 653 RIAVYLLYSFLTLIATLLAV 672 >UniRef50_B2V8R6 NADH dehydrogenase (Quinone) n=1 Tax=Sulfurihydrogenibium sp. YO3AOP1 RepID=B2V8R6_SULSY Length = 662 Score = 416 bits (1070), Expect = e-114, Method: Composition-based stats. Identities = 203/616 (32%), Positives = 342/616 (55%), Gaps = 15/616 (2%) Query: 60 LVARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMN 119 + F F + ++D+LS F V ++SLL S+YS++Y++E+E + + F N Sbjct: 51 FIVSFQSVIPFLTFSYKVDNLSLFFVGLVSLLSFASSIYSVSYIKEFENQ--KVLTFLYN 108 Query: 120 IFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIA-RQDKTSINAGMLYFFIAHAGSVLI 178 +FI SM+ +++ N F++ +E+MS+ S+ LVI + + ++NAG+ Y F+ H G+ I Sbjct: 109 LFIFSMIMVILSANVPTFLIWWEIMSVVSFLLVIFDYKKQENLNAGIFYIFMTHLGTTFI 168 Query: 179 MIAFLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAA 238 +I+F+L+ SGSL+F F ++L + VFL + GFG KAG+ LH WLP+AHP A Sbjct: 169 IISFILLYIYSGSLEFKDFVNVNLPEDVKFLVFLTSLIGFGTKAGIFLLHFWLPKAHPVA 228 Query: 239 PSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQ 298 PS+ SALMSGVM+K I+ +++ + L +P+ +G +V+ IGA+SA+ G+LYA + Sbjct: 229 PSNVSALMSGVMIKTAIYMLIRFYFEFLKD--MPVAFGYIVLFIGALSAIYGILYAYVQT 286 Query: 299 DIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLG 358 DIK++LA+S++EN+GIIL+AVG+AM+ S H +L + + L+H LNH +FKGLLFLG Sbjct: 287 DIKKMLAYSSMENIGIILIAVGLAMIFKSSHVWILMGISFIAVLYHTLNHTVFKGLLFLG 346 Query: 359 AGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLS 418 AG+++ + HT +ME++G L K MP T LIG L I+A+PP NGF+SEW +QSL S Sbjct: 347 AGSVLFKTHTKNMEELGGLNKIMPKTGILFLIGILGITALPPFNGFVSEWLIYQSLLFGS 406 Query: 419 RVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAM 478 ++ + P+ +LA+TG A+ F K+YG F G R+ ++A E M+ M Sbjct: 407 KLNYEFISFTMPLFASVLALTGAFALGSFAKLYGTVFLGIGRTDKVKKASESDGFMLTGM 466 Query: 479 LLLAALCVLIALS---ASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLL 535 LA + V++ L ++ +++ +F+ +G+ L+ + Sbjct: 467 GFLAFMVVILGLIPILPVYVIDEVLKQTASFSIYNYIIYKNGLLLISTDYDFGRIS--TS 524 Query: 536 LLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWEN---AMAPSGNGVMQPLRVVFS 592 +L +A ++ + + R R + WACG G N S +G QP+R + S Sbjct: 525 ILAIAGIVIFVITYFLIRKIGNGNVREYETWACGLGESNLTVKAQYSASGFSQPIRRILS 584 Query: 593 ALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDF 652 ++++++ L + K ++ + + + K +Q G Sbjct: 585 FVYKIKESL--SFSGKKYFLPKKTYKLEIIDRIEDLALSLTDIFIKIVLKVRYFIQPGII 642 Query: 653 RLYCLYVVAALVVLLI 668 +Y Y++ L+ + Sbjct: 643 HVYIAYIILTLIAFIF 658 >UniRef50_C0QBF3 HyfB n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QBF3_DESAH Length = 655 Score = 415 bits (1067), Expect = e-114, Method: Composition-based stats. Identities = 228/662 (34%), Positives = 344/662 (51%), Gaps = 23/662 (3%) Query: 6 LLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLH-AGVTLVARF 64 L ++I++L ++ L LG + A + +L G V+ + + I + G LV + Sbjct: 3 LFAGAMIVFLAGAVF-LPFLGRSKRANTAGALFALAGSVMAMAASIDAITRDGFDLVLPW 61 Query: 65 APPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGF-FMNIFIA 123 F L LRMD LS F LVI L+ ++Y YM Y GK + + I A Sbjct: 62 K--FLLGSLHLRMDPLSGFFGLVICLVSGFSAIYGARYMDAYAGKKHLGIAWSLYLILTA 119 Query: 124 SMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSI-NAGMLYFFIAHAGSVLIMIAF 182 SM+ ++ N F++ +E+MS+SS+ LVI + + AG +Y H G+ L+++ F Sbjct: 120 SMMLVITAWNGVLFLIAWEIMSVSSFLLVIFEFQRPGVLKAGWIYLVATHLGTALLLVMF 179 Query: 183 LLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHA 242 ++MG+ + F + S AS VF+LA GFG KAG++P H WLP AHPAAPSH Sbjct: 180 MVMGKN----NAYDFNLVQASSTGASLVFILAVIGFGTKAGLLPFHVWLPEAHPAAPSHV 235 Query: 243 SALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKR 302 SA+MS M+K GI+GI+++ M + WG ++ IGA++ + GV+ ALA+QDIKR Sbjct: 236 SAVMSAAMIKTGIYGIIRICMLIGPPKAS---WGWTLIIIGAMTGIFGVMSALAQQDIKR 292 Query: 303 LLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAI 362 LLA+S+VEN+GII + +G+ + LS P + +G+ G + H+LNHALFK LLF GAG++ Sbjct: 293 LLAYSSVENMGIICIGLGLGFLALSTGHPFIGALGISGGMLHVLNHALFKSLLFFGAGSV 352 Query: 363 ISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLF-SLSRVE 421 + HT DMEKMG L K MP T +I A+ A+PPLNGFISE+ + F SL + Sbjct: 353 LHSTHTRDMEKMGGLMKSMPVTGTTFVIASAAVCALPPLNGFISEFLIYFGAFSSLYASK 412 Query: 422 AVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLL 481 LAG + +V LA+ GGLA+ CF K GI F G PRS+ A +A E P M + M++L Sbjct: 413 GTFSVLAGILVIVSLALIGGLALACFSKAAGIVFSGHPRSSEARDAHESPLAMGIPMIVL 472 Query: 482 AALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAM 541 A LC+L+ + + + + N+ +T + + + L+ + Sbjct: 473 AGLCLLVGIFSPLVIDFFQPVFETVINSLGSTGFARLKSA-----AIPLTMISRAGLIIL 527 Query: 542 PLLPGLYWLWCRSRRAAFRRTGDAWACGYGWEN-AMAPSGNGVMQPLRVVFSALFRLRQQ 600 + L L + T W CGY M + + P+ +F A+ R+ Sbjct: 528 ATILLLAGLRRYLLKNRTIHTTGTWDCGYTAPTARMQYTASSFADPITGMFGAILGSRKD 587 Query: 601 LDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVV 660 L L + R+ + + RP+ A +A LQ G +LY LY+V Sbjct: 588 LKADTSLFPIFLSIKTRSTD---LFMYLLYRPVFHAIAWVALRFHFLQRGYNQLYILYIV 644 Query: 661 AA 662 Sbjct: 645 IT 646 >UniRef50_B6WWH3 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WWH3_9DELT Length = 670 Score = 405 bits (1040), Expect = e-111, Method: Composition-based stats. Identities = 218/672 (32%), Positives = 333/672 (49%), Gaps = 18/672 (2%) Query: 4 LQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAG---VTL 60 L LL ++ A L L +L+ + +G G G+ L +L Sbjct: 3 LILLALCVLAVSAAGLGLLAFARPTPATTRLADLFGPLGAACGCALGMAGLFTDSWTGSL 62 Query: 61 VARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYE--GKGAAAMGFFM 118 + A L+L +D+LS +L + L VC+ +R AA F Sbjct: 63 LWTQAWGLPVGSLSLGLDALSRVFLLPVFGLGFVCACAGGISLRHTRASEHNLAAHWLFY 122 Query: 119 NIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSIN-AGMLYFFIAHAGSVL 177 + + M +++ +A F++ +E+MSLS +FL+ ++ A +Y AH G+VL Sbjct: 123 LLLVLGMAVVMMARDAVLFLLAWEVMSLSPFFLIDFNDSDRNVRDASWVYLVAAHLGAVL 182 Query: 178 IMIAFLLMGRESGSLDFASFRTLSLSP-GLASAVFLLAFFGFGAKAGMMPLHSWLPRAHP 236 ++ F L+ + +G FA LAS +F+L+ GFGAKAG+ P+H WLP AHP Sbjct: 183 LLAFFGLLWQNAGDTAFAVLALKEGPVVPLASVLFVLSLLGFGAKAGIAPMHVWLPEAHP 242 Query: 237 AAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALA 296 AAPSH SAL+SG M+ G++GI++ + + P WWG L + +G +AL+G+L ALA Sbjct: 243 AAPSHISALLSGAMINAGLYGIIRSCEFVAPLSAAPAWWGWLTLFLGLGTALMGILKALA 302 Query: 297 EQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLF 356 + ++KRLLA+S+VEN+G++L+ VG ++G + + +GL GA+FH+LNH+ FKGLLF Sbjct: 303 QSNLKRLLAYSSVENMGLMLMGVGAWLIGSHSGNSWIGTLGLAGAMFHMLNHSAFKGLLF 362 Query: 357 LGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFS 416 L AG ++ T ME +G L +RMP AA IG ++I+ PP NGF E+ SL Sbjct: 363 LTAGEVLHATGTVRMELLGGLQQRMPLVGAAFGIGAVSIACFPPFNGFAGEFVLALSLLD 422 Query: 417 LSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIV 476 S + V QL +A+V+L + GLA + K YGITF GAPRS EEA + Sbjct: 423 GSSLPGVEQQLGLLMALVVLGLVSGLAAATYAKAYGITFLGAPRSRCVEEAHRPRPRDLW 482 Query: 477 AMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLL 536 + + A LCV L++ + N P +G ++ T SL+ + Sbjct: 483 PLAIPAFLCVAGGLASG----HCFRWLISTVNAPLPDPVAGQQVMLRVADMLGTVSLVGM 538 Query: 537 LLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGW-ENAMAPSGNGVMQPLRVVFSALF 595 +LLA+ L C + R R + W CGY + + + +PL +F Sbjct: 539 VLLALVAALWLLRKACIAGRL---RREETWGCGYQYGTPRVQYTDASFSEPLGRIFGGAM 595 Query: 596 RLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLY 655 L+ + R G A V A S + P+ ++L + LQ G LY Sbjct: 596 GLKVHQELDGRYFPGKASV---AISAPDRLRTGLFTPLFEGVEKLCNMCKILQHGKIHLY 652 Query: 656 CLYVVAALVVLL 667 LY++A LV LL Sbjct: 653 ILYILATLVALL 664 >UniRef50_Q6APE8 Probable hydrogenase, component B-formate hydrogenlyase subunit 3 n=1 Tax=Desulfotalea psychrophila RepID=Q6APE8_DESPS Length = 652 Score = 401 bits (1030), Expect = e-110, Method: Composition-based stats. Identities = 230/672 (34%), Positives = 356/672 (52%), Gaps = 24/672 (3%) Query: 3 ALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVA 62 + + SL + + SL + I + VG IGI + LH V Sbjct: 1 MMNIFLLSLTVLFVGGIFSLLSYRHFNVMKVGYVIITAVGCAIGIYAITIPLHGAVVPSF 60 Query: 63 RFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAM-GFFMNIF 121 P L+ +D+LSAF ++ I ++ + +LYS YM + E KG + FF N+ Sbjct: 61 S-RPWLHLFTLSFSLDALSAFFLIPIFVVCPLAALYSYHYMDKIEEKGRIGVSFFFFNLL 119 Query: 122 IASMVALLVMDNAFWFIVLFEMMSLSSWFLVIA-RQDKTSINAGMLYFFIAHAGSVLIMI 180 + SM + DN F++++E+MSLSS+FLVI Q++ + AG +YF A AG++ I+ Sbjct: 120 LISMALVTAADNIISFLLVWELMSLSSFFLVIHDYQEEDTRRAGYIYFVFAQAGAMFIIA 179 Query: 181 AFLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPS 240 A L ++G DFA+F TL + VF LA GFG+KAG+ PLH WLP AHPAAP Sbjct: 180 ALALAYSQTGIHDFAAFATLPAH--IKLIVFFLALVGFGSKAGIFPLHMWLPHAHPAAPC 237 Query: 241 HASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDI 300 H SA+MSGVM+K+GI+GI+++ ++L L G V+ +G IS +LGV+YAL +QDI Sbjct: 238 HISAIMSGVMIKMGIYGIIRLYVEL---EDTSLIIGQTVLTLGMISGILGVVYALGKQDI 294 Query: 301 KRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAG 360 K++LA+S+VEN+G+IL+ G+ M+G+S + ++ G G L H+LNH+LFK LLFLGAG Sbjct: 295 KKVLAYSSVENIGVILIGAGIGMMGMSTGNMVMASFGFAGCLLHVLNHSLFKTLLFLGAG 354 Query: 361 AIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRV 420 AI+ + T ++++G L KR+P T + L G ++IS +PP NGFISE+ + F + Sbjct: 355 AIVQKTGTRRLDELGGLIKRLPLTGKSFLAGSVSISGLPPFNGFISEFLIYYGAFHGLSL 414 Query: 421 EAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLL 480 + A A ++++ LA+ GGLA CF +M GI F G PR+ A +A E TM + M+ Sbjct: 415 KGSAFLFAM-LSILALAIIGGLAASCFTRMMGIIFLGEPRTAKAAKATEAGFTMTLPMIF 473 Query: 481 LAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLA 540 LAA C+ I L AP + + A + P T G + + + L L +L+ Sbjct: 474 LAASCLFIGLFP---APFVGIVFSALASIPALTPIDGAEVTLLAENLGLAARLFLAVLIF 530 Query: 541 MPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWEN-AMAPSGNGVMQPLRVVFSALFRLRQ 599 LL L + R W C + + M +G + F +++ Sbjct: 531 STLLRKLLY------RNKVVVQAPTWGCAFAQPSVKMQYTGTSYAMSIIAFFRPFIQIKT 584 Query: 600 QLDPTLR-LNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLY 658 R + + T E ER++ P++ + + +Q G +LY Y Sbjct: 585 NYSGIKRIFPRKTTYKTEVDDIAEVCLIERIVTPLLYFLGKF----RWIQHGHIQLYIAY 640 Query: 659 VVAALVVLLIAI 670 + ++VLL+ + Sbjct: 641 IAVTIIVLLLCV 652 >UniRef50_A7I7D4 NADH dehydrogenase (Quinone) n=3 Tax=Methanomicrobia RepID=A7I7D4_METB6 Length = 649 Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats. Identities = 193/649 (29%), Positives = 329/649 (50%), Gaps = 33/649 (5%) Query: 28 DRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAPPFEFADLTLRMDSLSAFMVLV 87 R++ LS + + ++ + L G+ PF +T +D L+AF +++ Sbjct: 28 SRISRLLSLACVVGASALLLLFALIVLVTGIPESIPAWQPFPGISVTFFIDRLAAFFLVL 87 Query: 88 ISLLVVVCSLYSLTYMREYEGKGAAA-MGFFMNIFIASMVALLVMDNAFWFIVLFEMMSL 146 I + ++Y Y+ E EG G + +F+ +M ++ F++ +E+M+ Sbjct: 88 IGAVSACVAVYCTGYIEEMEGAGRRNILCGCTALFVFAMALVVASATTISFLLFWELMAA 147 Query: 147 SSWFLVIARQDK-TSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRTLSLSPG 205 S+ LV+ + AG+ YF + ++ +M+ +L+ +GS A + S Sbjct: 148 VSFLLVMYDYTGSETTRAGIFYFVMTQLSTLFVMLGIILLFFATGSFAIAPAHVTAGSLP 207 Query: 206 LASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDL 265 L +A FL F GF KAG++P H WLP AHPA+PS SALMSGVM+K+ ++G+++ + + Sbjct: 208 LVTAAFLALFVGFSVKAGIIPFHKWLPYAHPASPSPVSALMSGVMLKVAVYGLIRFLVAV 267 Query: 266 LAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVG 325 LWWG++++ G SA+LGV+YA+ E DIK LLA+S++EN+GII + +G+ ++ Sbjct: 268 FTPD---LWWGMVILIAGITSAVLGVIYAIKEDDIKGLLAYSSIENIGIIFVGIGLFVIF 324 Query: 326 LSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTA 385 P+L + LL ALFH LNHALFK LLFL +G+++ HT D+E+MG LA RMP T+ Sbjct: 325 SCTGLPMLATISLLAALFHSLNHALFKSLLFLTSGSVVHATHTRDIEQMGGLASRMPVTS 384 Query: 386 AACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVM 445 A +G AI+A+PPLNGF SE + + F V +++ + + + A+T L+ Sbjct: 385 ALFFVGAAAIAALPPLNGFASELLVYTAFFESVTVADPLIKILLFVCLALFALTSALSAA 444 Query: 446 CFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHA 505 CFVK +G F PRS + EA+E M+ LLA CV++ + + + +I Sbjct: 445 CFVKAFGSIFLARPRSQESREAREAGRAMLAGPALLAIACVVLGVFSYQILAGFGYI--- 501 Query: 506 FTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDA 565 LLL+ + + ++ L ++ + RT + Sbjct: 502 -----------------------FPIPDLLLVSVLLLVMGALTYIVLYVTASHAERTSET 538 Query: 566 WACGY-GWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRL-NKGLAHVTARAQSTEP 623 W CG + +G+G +P+ +F+ L+R ++ + + + Sbjct: 539 WGCGSLSLPASAEYTGHGFSEPIVTIFAPLYRTKKTVTKNYYDRHDCIVAGGTAEIRLVK 598 Query: 624 FWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLIAIAV 672 F++E + P+ R A + +Q+G Y LYV A+V ++I + V Sbjct: 599 FFEEYLYLPLARGANRAAGYVARMQNGCLDTYLLYVFLAVVAVIIFLGV 647 >UniRef50_A6Q6W0 Ni-Fe hydrogenase, membrane subunit HycC/HyfB n=4 Tax=Bacteria RepID=A6Q6W0_SULNB Length = 627 Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats. Identities = 199/600 (33%), Positives = 321/600 (53%), Gaps = 6/600 (1%) Query: 75 LRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNA 134 + D+LS V +I L + YS Y+ E K + +F FI SM+ ++V NA Sbjct: 2 FQFDTLSVIFVALILLGAIPNLFYSHGYLPHIERKIHYQLHYF--AFILSMLGVVVSANA 59 Query: 135 FWFIVLFEMMSLSSWFLVIAR-QDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLD 193 F++ +E+MSL+SW L++ ++K +I A YF + H G V +++ FL++ + Sbjct: 60 LVFLLFWELMSLTSWQLILTEAKEKKTIEAAKFYFIMTHFGFVFLLLFFLIVTDGDLEIG 119 Query: 194 FASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKI 253 FA+ ++ + + +F GF +KAG +PLH WLP AHP APS SALMSGVM+K+ Sbjct: 120 FAAMHGIASAFAYPTLLFFFLILGFLSKAGAVPLHVWLPYAHPEAPSPVSALMSGVMLKV 179 Query: 254 GIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVG 313 I+G+ + D+L PL WGI+++ IGA+S+L+GVLYAL+E DIK LLA ++EN+G Sbjct: 180 AIYGMFRFLFDVLYP--WPLEWGIVILVIGALSSLVGVLYALSEHDIKALLANHSIENIG 237 Query: 314 IILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEK 373 IIL+ G+ M+ S+H +L+ + ALFH NH FK LLF+GAG+++ + HT ++EK Sbjct: 238 IILMGFGMGMIFDSMHLKVLSSFAFIAALFHTFNHMSFKSLLFMGAGSVLHQTHTKNIEK 297 Query: 374 MGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAM 433 G L K MP TA L+ ++ISA+PP NGF+SEW +QS+ S + ++L+LA P A+ Sbjct: 298 YGGLIKSMPITALTFLLASISISALPPTNGFLSEWMIFQSMLGSSHLGNMSLKLAIPFAI 357 Query: 434 VMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSAS 493 LA+TGGLA+ CFVK YGITF G RST+A+ A EV M ++L+A + + + L Sbjct: 358 FALAMTGGLAIACFVKAYGITFLGLHRSTNAKHAHEVNFLMRSGLILMALVVISLMLFTP 417 Query: 494 WLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCR 553 + A + ++ + + L+LLA + ++ Sbjct: 418 FYIAWFDKGLVALGHLSVYDKIFPERVLHMHSVSMHGGVVSPLILLAALIGVTALLMFAY 477 Query: 554 SRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQL-DPTLRLNKGLA 612 R W CGY + G P+R F+ L++ + TL ++ Sbjct: 478 KTLKVKERVHHTWGCGYRTSAKTQYTATGFAGPIRRFFNWLYKPEEHFCKETLAGHESKF 537 Query: 613 HVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLIAIAV 672 + +P ++ + + A ++ + L + Y + ++++L + + Sbjct: 538 SSSHYEVHVKPLFETSLYNSVSKAANAISYWVYRLSHFEQTRYAAMIFNLMLMVLFSYRI 597 >UniRef50_C6PUG7 NADH dehydrogenase (Quinone) n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PUG7_9CLOT Length = 594 Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats. Identities = 182/599 (30%), Positives = 323/599 (53%), Gaps = 27/599 (4%) Query: 78 DSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGF-FMNIFIASMVALLVMDNAFW 136 D +S F ++I ++ +YS+ Y EY+GK + F M +F ASM+ +++ ++ Sbjct: 13 DPISIFFAIIIFVVFAPIFIYSIGYTAEYKGKYSVKYNFMLMLLFAASMLCVVLARDSIT 72 Query: 137 FIVLFEMMSLSSWFLVIA-RQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFA 195 FIV +E+MS S+FLV+ ++K +I +G++YF + H + +MI F + + +GS+ F Sbjct: 73 FIVFWEVMSAVSFFLVVYEYKNKENIRSGIMYFIMTHISGLFLMIMFAFLYKYTGSISFD 132 Query: 196 SFRTLSLSPGL--ASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKI 253 F LS + +F A GFGAKAG++PLH WLP+AHP+APS+ASALMSGVM+K+ Sbjct: 133 KFYQLSNDFTISQKYIIFTFAILGFGAKAGLLPLHGWLPKAHPSAPSNASALMSGVMLKV 192 Query: 254 GIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVG 313 I+G+++V + L ++++ A++A+ VL AL ++DIK+LLA+S+ EN+G Sbjct: 193 AIYGLIRVTFTFIKVLPLKAALLLVLLG--AVTAIFSVLNALVQKDIKKLLAYSSAENIG 250 Query: 314 IILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEK 373 II+ +G+++V +L+ + L+ ALFH+ NHA+FK LLF AG+++ T +M + Sbjct: 251 IIISTLGLSLVFYNLNLNSFANLTLIAALFHIFNHAIFKSLLFASAGSVLYSTGTKNMNE 310 Query: 374 MGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSL-FSLSRVEAVALQLAGPIA 432 +G L K+M + A IG AISAIPPLNGF SE ++ + ++ L + Sbjct: 311 LGGLYKKMKFAAICAFIGTAAISAIPPLNGFASEILIFKCFIIGTASIKGTWTALIIIGS 370 Query: 433 MVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSA 492 +++A+T G+ + VK +GIT+ GAPRS A A ++P +M + + +LA LC++ + + Sbjct: 371 GLIIALTSGVTLYASVKSFGITYLGAPRSEKAINAHKIPLSMNIGLGILALLCIISGVFS 430 Query: 493 SWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWC 552 ++ I ++++ NT + S I + +L L++ L Sbjct: 431 PFIINLISKVSNSILNTNLPLMNSEINNEIIIVSSIFVIITAILALISKVL--------- 481 Query: 553 RSRRAAFRRTGDAWACGYGW-ENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGL 611 + W CG+ ++ M S NG+ QP +F + R +++ + Sbjct: 482 --NNKKATVIKETWGCGFNNVKSNMQYSANGLSQPSTRIFGKVVRYEKEVKNGYSIL--- 536 Query: 612 AHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLIAI 670 ++ + +V ++ + + G ++Y Y+ +L+V ++ + Sbjct: 537 -----LKDKVLDNIEKYIYGSVVKVVYYISLRVTKIHFGKIQVYVSYIFVSLLVTVLIV 590 >UniRef50_C7LSU3 NADH dehydrogenase (Quinone) n=2 Tax=Bacteria RepID=C7LSU3_DESBD Length = 577 Score = 397 bits (1020), Expect = e-109, Method: Composition-based stats. Identities = 209/598 (34%), Positives = 314/598 (52%), Gaps = 27/598 (4%) Query: 75 LRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEG-KGAAAMGFFMNIFIASMVALLVMDN 133 +R+D++SAF +L+++++ + YS TY + + + A + + +ASM +L N Sbjct: 1 MRLDAISAFFLLLLAVVGASGAFYSRTYWSQKKHPRSARQSRLWWSAMLASMGMVLTQSN 60 Query: 134 AFWFIVLFEMMSLSSWFLVIARQDKTSINAG-MLYFFIAHAGSVLIMIAFLLMGRESGSL 192 F+ +E +LS++FLV +D + A LY +HAG++ + F + ++GS Sbjct: 61 GLHFLFAWESFALSAYFLVTLERDNPKVRAAGRLYLVASHAGTLALFGFFTSLAAQTGSW 120 Query: 193 DFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVK 252 + S + +F +A GFG KAG+ PLH WLP AH APSH SA+MSGV +K Sbjct: 121 ELGPM----TSQTSLAPLFWVALLGFGIKAGVFPLHIWLPSAHANAPSHVSAIMSGVAIK 176 Query: 253 IGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENV 312 +GI+G+++ + L LP G +V +G +SA+LGV +AL + D+KRLLA+ +VEN+ Sbjct: 177 MGIYGLVRFSSWL----PLPAGAGWVVAGLGCVSAVLGVAFALGQHDVKRLLAYHSVENI 232 Query: 313 GIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDME 372 GIIL+ +G AM+ L P ++ L G L H+ NH LFK LLFLGAGA++ T +M Sbjct: 233 GIILIGLGFAMIALDQGRPEWGLLALSGGLLHVWNHGLFKALLFLGAGAVLHSTGTREMS 292 Query: 373 KMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIA 432 ++G L K MPWTAA +G +AIS +PPLNGF+SEW + LF R+ A A P A Sbjct: 293 RLGGLWKTMPWTAALFTLGAMAISGLPPLNGFVSEWLIFSGLFDAGRLRTAASLGAVP-A 351 Query: 433 MVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSA 492 ++L VTG LA+ CFVK+ G+ F GAPRS A A+E M AM +LA C++I L+ Sbjct: 352 AILLGVTGALALACFVKVCGVVFLGAPRSEAAANARECGTGMRAAMGVLALGCLIIGLAP 411 Query: 493 SWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWC 552 ++ P ++ +A + T P + P LLA+ +L Sbjct: 412 AFFWPTLLRVAGVWAQTAP----------DSGIANHLAPLGTAHALLALAILATAAAAIA 461 Query: 553 RSRRAAFRRTGDAWACGYGWEN-AMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGL 611 R RR W CGY M + + F + R + Sbjct: 462 LLRGRQTRR--QTWDCGYRAPTARMQYTAGSFAGIITAWFGWILRPSVHASLPEDIFPAR 519 Query: 612 AHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLIA 669 + + T E+V+ P ++ RLA + Q G + Y LY+ AALV+L IA Sbjct: 520 SRLE---SHTPETVLEQVVTPAANSILRLADFARTFQHGRVQSYLLYLCAALVMLSIA 574 >UniRef50_A9QPJ4 Formate hydrogenlyase subunit 3 n=1 Tax=Methylacidiphilum infernorum V4 RepID=A9QPJ4_METI4 Length = 667 Score = 395 bits (1014), Expect = e-108, Method: Composition-based stats. Identities = 218/656 (33%), Positives = 334/656 (50%), Gaps = 12/656 (1%) Query: 3 ALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVA 62 L L+L L + L + + L ++ G+ ++S L G + A Sbjct: 1 MQDYLLKGLLLSFVFYLGLILLARKNYRGVYL--LSGFYAGISFLLSLFFLLFHGSSQAA 58 Query: 63 RFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFI 122 F R+DSLSAF +LV++L + SLY L Y + + + F +F+ Sbjct: 59 VFPLGLPGTGAHFRIDSLSAFFLLVVNLASFMASLYGLGYGSHFAEQQ--RILPFYILFL 116 Query: 123 ASMVALLVMDNAFWFIVLFEMMSLSSWFLVIA-RQDKTSINAGMLYFFIAHAGSVLIMIA 181 SM +L+ + F F+ +E+MSLSSW LV++ ++K + AG +Y +A G+ ++ + Sbjct: 117 GSMNMVLLAADMFSFLFFWELMSLSSWALVMSSHKEKETAGAGFIYLLMAVLGTFALLFS 176 Query: 182 FLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSH 241 L+ SG+ F +L AS VF LA FG G+KAG++PLH+WLPRAHPAAPSH Sbjct: 177 MSLLASHSGTFSFEGMSKAALPSKSASLVFALALFGAGSKAGLVPLHAWLPRAHPAAPSH 236 Query: 242 ASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIK 301 SALMSGVM K+ ++G L++ DLL WW L++ I +S + GVLYAL + D+K Sbjct: 237 VSALMSGVMTKVAVYGFLRIVFDLLRTQ--EKWWSYLLLVIAGVSMIAGVLYALMQHDLK 294 Query: 302 RLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGA 361 RLLA+ T+EN+GI+ + +G+AM + + + +LFH+LNH+LFK LLFLGAG+ Sbjct: 295 RLLAYHTIENIGIVFVGIGLAMAFKTYGMVAASALSFSASLFHVLNHSLFKNLLFLGAGS 354 Query: 362 IISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVE 421 I S + DMEK+G L +MP+TA A L+G +AI A+PPLNGF+SEW QS+ ++ Sbjct: 355 IQSSTGSRDMEKLGGLVSKMPYTAFAFLMGSMAICALPPLNGFVSEWLLMQSILLSPQLP 414 Query: 422 AVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLL 481 + L+ P LA++ LA CF+K+YGITF G PRS A A E ++A+ L Sbjct: 415 SWGLKFLVPSIGAFLALSAALAASCFIKVYGITFLGRPRSMSAMAATETDRWSLLALYFL 474 Query: 482 AALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAM 541 A LC+L + + + + + ++ P + + L L+L + Sbjct: 475 AFLCLLWGVFPAPVLHLLGPAVGLLSGGEYFNLSGKPFYEPLSLNIDRNAYNGLFLILLL 534 Query: 542 PLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAM-APSGNGVMQPLRVVFSA-LFRLRQ 599 + + + R AW CGY + + QP+R VF F +++ Sbjct: 535 GGFSLCILFMVLGKASPYARKTPAWDCGYPENSPFCQYTAGSYAQPIRKVFGPAFFAVKE 594 Query: 600 QLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLY 655 ++ A + R E P+ R + +I LQ R Y Sbjct: 595 KVVCLSPWLPKPARIFLRLHDLAW---EYGYLPVARTIDRWSAKINILQFLTVRRY 647 >UniRef50_B2HHH3 Oxidoreductase n=6 Tax=Mycobacterium RepID=B2HHH3_MYCMM Length = 658 Score = 394 bits (1013), Expect = e-108, Method: Composition-based stats. Identities = 191/647 (29%), Positives = 304/647 (46%), Gaps = 10/647 (1%) Query: 28 DRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAPPFEFADLTLRMDSLSAFMVLV 87 + LSG T+ G G G+T + GV A + + L F + + Sbjct: 19 NGFGAVLSGATTAGIGACGTALGLTAVF-GVVRQVHIAWLVPLIGVDFDIGRLGGFFIAL 77 Query: 88 ISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLS 147 + VV +YS+ Y R A + +F+ +M+ + + F++ +E+M++S Sbjct: 78 TGAVAVVAGIYSIGYARRE--HLGAVALTMLPVFVTAMLLVPAAGSVSTFLLAWELMAIS 135 Query: 148 SWFLVIARQDKTSIN-AGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRTLSLSPGL 206 S LV + + A Y + G +++ +++ +G+ FA S G+ Sbjct: 136 SLVLVATDHRRAQVRSAAGYYAVMTQLGFATLLLGLMVLAAAAGTDRFADMAV--PSEGV 193 Query: 207 ASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLL 266 + VF+ GFG+KAG++PLH+WLPRAHP +PS SALMS MV +GI+G++++ + LL Sbjct: 194 RTFVFVATLLGFGSKAGLLPLHAWLPRAHPESPSPVSALMSAAMVNLGIYGLVRIDLQLL 253 Query: 267 AQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGL 326 P WWG+ ++ IGA SA+ GVL A D+KRLL +ST+EN+G++ L +G A + Sbjct: 254 GPG--PKWWGVTLLVIGAFSAMYGVLQASVATDLKRLLGYSTIENMGLVTLGLGAATLLS 311 Query: 327 SLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAA 386 + V+ + AL HL+ HA FK L FL AG+++ D++ +G LA RM T Sbjct: 312 AAGAGPAAVIAMTAALLHLIAHAAFKSLGFLAAGSVLVATQQRDLDMLGGLAHRMRCTTT 371 Query: 387 ACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMC 446 I L S +P GF+SEW QSL + LA P+ + +A+T GL V Sbjct: 372 FFGIAALGASGLPLGAGFVSEWLLVQSLIHARPEHNTIVGLATPLGVGAVALTTGLGVAA 431 Query: 447 FVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAF 506 VK +G F PRS AE A+E P TM+V M + A CV+IA++ + + + + Sbjct: 432 MVKAFGTGFLARPRSGSAERAREAPATMLVGMAVAALGCVVIAIAPAVVTGPLQSVLDTL 491 Query: 507 TNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAW 566 + A + ++ LL L LL L SR T W Sbjct: 492 PASRNADLTDLGTVLRLPGMDGSISPALLAAALVAALLVVLVLARWGSRHRPEPVTSPLW 551 Query: 567 ACGYG-WENAMAPSGNGVMQPLRVVFSALFRLRQQLDPT-LRLNKGLAHVTARAQSTEPF 624 ACG M + QPL+ VF + R ++ T L + A Sbjct: 552 ACGADELTARMECTPTSFAQPLQRVFDDVLRPDTGIEVTHLEATRYHVEQIAYRAHLSDA 611 Query: 625 WDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLIAIA 671 ++R+ P++ A A+ I+ +G LY Y ++++L+ Sbjct: 612 IEDRIYAPVLRALAWCAQVIRRAHNGSVHLYLGYGALGVLIVLVVAR 658 >UniRef50_Q2FKT7 NADH dehydrogenase (Quinone) n=1 Tax=Methanospirillum hungatei JF-1 RepID=Q2FKT7_METHJ Length = 643 Score = 393 bits (1011), Expect = e-107, Method: Composition-based stats. Identities = 193/673 (28%), Positives = 336/673 (49%), Gaps = 37/673 (5%) Query: 3 ALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVA 62 ++ + ++LY + + L + + +S I GG++ + + L Sbjct: 1 MSEIFLFIILLYALSGVIPLCIRK--KRIWSVSSIIMGGGGILLTLFSLPFLLVSSAKTI 58 Query: 63 RFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYM-REYEGKGAAAMGFFMNIF 121 F + + + +D LSA +++ LL + +LY+ Y+ R + + + + +F Sbjct: 59 LFQGAWVTFPIRIGIDRLSALFCILLGLLSLAVALYTPGYLDRMHGNRRTYVVSGLIPLF 118 Query: 122 IASMVALLVMDNAFWFIVLFEMMSLSSWFLVIAR-QDKTSINAGMLYFFIAHAGSVLIMI 180 + SM+ +++ + F+V +E+M++ S+FLV+ +++ + A + Y + +V + + Sbjct: 119 LLSMLLVIMAETVIAFLVFWELMAILSFFLVLTEFEEEKTRYAALFYLAMTQISTVFVFL 178 Query: 181 AFLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPS 240 LL+ +GS ++ LS S L S FL FFG K+G++P H WLP AHPAAPS Sbjct: 179 GILLIRLGTGSWEYPV--HLSGSDPLISLSFLCLFFGIAIKSGVIPFHKWLPHAHPAAPS 236 Query: 241 HASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDI 300 SALMSG+M+ ++ +++V A WG L++A G ++A+LGV+YAL EQD+ Sbjct: 237 PVSALMSGMMISTALYALIRVVTGFYAPDAA---WGFLILAFGCLTAVLGVMYALKEQDL 293 Query: 301 KRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAG 360 K LLA+S+++N GIIL+ +G+ ++ L ++ + GA+FH ++H LFKGLLFL AG Sbjct: 294 KGLLAYSSIDNTGIILIGIGLWVLFTVFGSQTLALMAIAGAVFHAISHGLFKGLLFLTAG 353 Query: 361 AIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRV 420 ++ T ++++MG + RMPWT IG L+I++IPP +GFI E+ SL Sbjct: 354 SVCQAAGTRNIDEMGGILVRMPWTGGLFFIGVLSIASIPPFSGFIGEFLIIMSLIGGLSE 413 Query: 421 EAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLL 480 + LQ+ + + + ++TG L V FVK +G+TF PRS A++A+EVP M + Sbjct: 414 LSPLLQIVMVVVLSLFSLTGALTVTTFVKAFGLTFLALPRSEGADKAREVPWPMYAGPAV 473 Query: 481 LAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLA 540 LA + + + + + + H L LLLL Sbjct: 474 LALMSAGLGIFSGQVFSLLGHP----------------------GLLPDLLGLFLLLLGT 511 Query: 541 MPLLPGLYWLWCRSRRAAFRRTGDAWACG-YGWENAMAPSGNGVMQPLRVVFSALFRLRQ 599 L+ G W + + R W CG G + M +G+G +P+ F ++R R Sbjct: 512 SILVYGAVWSYASRKTRITR----TWDCGMMGSSSRMEYTGSGFTEPVVRFFGPVYRTRI 567 Query: 600 -QLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLY 658 L ++ L + F++E + P R A + LQ+GD Y LY Sbjct: 568 CTTHEFLDQHQCLFRSGTGSIHLMKFFEEYLYLPAARRIDRYASLVSSLQNGDIDRYVLY 627 Query: 659 VVAALVVLLIAIA 671 V +++L++ + Sbjct: 628 VFCTVLILILILG 640 >UniRef50_A1RWL8 NADH dehydrogenase (Quinone) n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RWL8_THEPD Length = 737 Score = 391 bits (1004), Expect = e-107, Method: Composition-based stats. Identities = 214/640 (33%), Positives = 348/640 (54%), Gaps = 18/640 (2%) Query: 6 LLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIG--------IISGITQLHAG 57 L S+ LY+ + + SL L + I+L+ + + ++ + G + G Sbjct: 8 LFLGSIALYVVSIVLSLILRSKPKENIRLTYALTALASLLLMLYSLDALLSPGAPVIVEG 67 Query: 58 VTLVARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGA-AAMGF 116 + + L +D LSAF++LVIS + + S++S+ Y Y G+ + + + F Sbjct: 68 IRVPGLQDQFGAHGFFALYVDKLSAFLLLVISFVALYSSIFSIGYSEMYAGEYSISYLTF 127 Query: 117 FMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIA-RQDKTSINAGMLYFFIAHAGS 175 F +F+ SMV ++ ++A F + +E+M+LSS+ LV + + S +A YF IAHAG Sbjct: 128 FYALFVLSMVLVVTANDALSFYLSWELMTLSSYMLVGYEHRSEESRDAAKTYFIIAHAGG 187 Query: 176 VLIMIAFLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAH 235 I++++ L+ GSL F +FR + PG+AS +FLLA GFG+KAG++PLH+WLP+AH Sbjct: 188 ACILLSYALLYFIKGSLSFDAFREGGVPPGIASLIFLLALVGFGSKAGIVPLHAWLPQAH 247 Query: 236 PAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPL-WWGILVMAIGAISALLGVLYA 294 PAAPS+ SAL+SGVM+K+ ++G+++V D L +G+ WG VM I A S ++GV +A Sbjct: 248 PAAPSNVSALLSGVMLKVAVYGLIRVVFDFLKPSGVEGGLWGCAVMIIAAFSTIIGVQFA 307 Query: 295 LAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGL 354 + + D+KRLLA+ ++EN+GIILL VG +++ S + + L AL+HLLNHA+FK L Sbjct: 308 VVQHDLKRLLAYHSIENIGIILLGVGASLILYSEGLKDVAALALTAALYHLLNHAVFKSL 367 Query: 355 LFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSL 414 LFLG+G+++ T + E +G L+K +PWT+ LI +AI+ +PPLNGF SEW T+QSL Sbjct: 368 LFLGSGSVLKSCRTRNFELLGGLSKYLPWTSVTFLIAAMAIAGVPPLNGFASEWLTYQSL 427 Query: 415 FSL---SRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVP 471 ++ + +A + LA + +ML + G LAV+CF K+YG+TF G P + E Sbjct: 428 LAVVKEAAGKAPWVSLAALFSALMLGLAGALAVLCFTKVYGVTFLG-PLGRVKPKGGES- 485 Query: 472 NTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTP 531 TM + M + AA C+++ ++ ++A + + T P A + + Sbjct: 486 LTMKIGMAIPAAACIVLGVAMPYVAVFVDKASRQITGAPAPLAAPSPLSLVLESNLLRGE 545 Query: 532 SLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWEN-AMAPSGNGVMQPLRVV 590 L L A+ +L L RR RT W G +E AM P+ +R + Sbjct: 546 VSLPGLAAALVILVAAAGLALGLRRLKITRT-PPWVSGVEYEPEAMKPTATAYASQVRGL 604 Query: 591 FSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVI 630 F+ L+ + + + + P + Sbjct: 605 FARLYGVTVKEHREYSVPPIYTRKLSYEVEMRPKIEAYAY 644 >UniRef50_Q21AT7 NADH dehydrogenase (Quinone) n=16 Tax=Alphaproteobacteria RepID=Q21AT7_RHOPB Length = 687 Score = 390 bits (1003), Expect = e-107, Method: Composition-based stats. Identities = 210/620 (33%), Positives = 325/620 (52%), Gaps = 12/620 (1%) Query: 41 VGGVIGIISGITQLHAGVTLVARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSL 100 G +IG + + A LV P+ A R+D+L+AF + V++L V SLY+L Sbjct: 60 AGALIGALRWLFAGAAADELVLPIGLPWLGA--HFRLDALAAFFLGVVNLGGAVASLYAL 117 Query: 101 TYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVI-ARQDKT 159 Y + F F+A M +++ +AF +++ +E MSL+SW LV+ ++ Sbjct: 118 GY--GQHETAPQRVLPFFPAFLAGMNLVVLAADAFSYLLCWEFMSLASWALVMTHHREPG 175 Query: 160 SINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFG 219 + AG +Y +A G++ +++AF L+ +G FA+ R + +P A+ V +L G G Sbjct: 176 NARAGYVYLLMASFGTLALLLAFGLLAGPAGDYGFAAIRAMPHAPAEATLVLILMLLGAG 235 Query: 220 AKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILV 279 +KAG++PLH WLP AHPAAPSH SALMSGVM K+ ++G ++V DLL +LV Sbjct: 236 SKAGLVPLHVWLPLAHPAAPSHVSALMSGVMTKVAVYGFIRVVFDLLGPPNWTA--SVLV 293 Query: 280 MAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLL 339 +++G ++A++G+LYAL E+D+KRLLA+ST+EN+GII + +G+A+ + L + Sbjct: 294 LSLGGVTAVMGILYALLEKDLKRLLAYSTIENIGIIFVCLGLALAFQANGQTLAASLAFT 353 Query: 340 GALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIP 399 ALFH+ NH+LFK LLF GAGA++ DM+++G L RMP T+ LIGC+AISA+P Sbjct: 354 AALFHVFNHSLFKSLLFFGAGAVLVATGARDMDRLGGLIHRMPVTSVVFLIGCVAISALP 413 Query: 400 PLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAP 459 P NGF+SEW +Q++ + L++ P +LA+ LA CFVK YG++F P Sbjct: 414 PFNGFVSEWLMFQAVLLSPSLPQWGLKIMVPAIGALLALAAALAAACFVKAYGVSFLSRP 473 Query: 460 RSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIA 519 RS A AQEV + AM++LA+LC+L + + + + ++ A + Sbjct: 474 RSDAAANAQEVDRFSLAAMVILASLCLLAGIFPGLVIDALSPVTQQILDSRLAVQSHLPW 533 Query: 520 LVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGY-GWENAMAP 578 L + LL+L + + L +L R + R AW CG+ Sbjct: 534 LSIIPIAERRGSYNGLLVLAFIAISASLGYLAIRRFSSHAVRRAPAWGCGFSDAVPQAQY 593 Query: 579 SGNGVMQPLRVVFSA-LFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSAT 637 S + QPLR VF LF R+ ++ G + E + I A Sbjct: 594 SPDSFAQPLRRVFGTLLFAAREHVE---MPPPGAVTPARFSVEIHDLVWEGLYGRIAGAV 650 Query: 638 QRLAKEIQHLQSGDFRLYCL 657 A + Q R Y Sbjct: 651 DYAAIRLDRWQLLTIRGYLS 670 >UniRef50_A0RMA9 Hydrogenase 4 membrane subunit n=2 Tax=Campylobacter fetus RepID=A0RMA9_CAMFF Length = 650 Score = 387 bits (995), Expect = e-106, Method: Composition-based stats. Identities = 200/658 (30%), Positives = 354/658 (53%), Gaps = 25/658 (3%) Query: 14 YLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAPPFEFADL 73 + + L L + ++A+ + + + I I +++ + A F F+ Sbjct: 9 FFLVGIICLVLYRVPKIALYIGLAIPCIISIFSTIYFIKNINSTYGF--KLAGNFLFSP- 65 Query: 74 TLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGA-AAMGFFMNIFIASMVALLVMD 132 + LS F +I+ + + +Y++ Y++E++ +G A N FI SM+ ++ Sbjct: 66 HFIITPLSGFFSFIITFIAIGICIYTIGYIKEFKDRGNLAVFAALFNFFILSMLLVVSSS 125 Query: 133 NAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSL 192 + F FIVL+E+M+L S L+ +K S M+Y IA G+ I+IA L + +GS Sbjct: 126 DVFSFIVLWEIMTLISALLLKFNDEKHSNKTVMIYLSIAQIGAFCILIALLFISYFAGSF 185 Query: 193 DFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVK 252 F + L + P +A+ + +L GFG+K GM P H W P +P APS+ + ++SG+M K Sbjct: 186 SFIQWSKLDIDPTVATCILILLLIGFGSKIGMFPFHVWAPLVYPLAPSNVAGMLSGIMSK 245 Query: 253 IGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENV 312 + IFGI++ ++ L +G + + V+A+GAISAL+G+ YAL + D +L+++S+VEN+ Sbjct: 246 MAIFGIIQFSVILPITSG----FALSVVALGAISALIGITYALIQNDYIKLISYSSVENL 301 Query: 313 GIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDME 372 GII+L VGV G+S+ +P L ++G +GALFH+LNH+ FK LLFLG+G+I S T +M Sbjct: 302 GIIMLGVGVGFYGISIAEPTLVLLGFIGALFHVLNHSTFKSLLFLGSGSIYSVTRTKNMN 361 Query: 373 KMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIA 432 +G LA++MP+TA LIG ++ISA+PPLNGFISEW+ ++S+F + +++A +L +A Sbjct: 362 SLGGLARKMPFTALFFLIGAISISALPPLNGFISEWFIYRSMFMGALDDSIASRLIFALA 421 Query: 433 MVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEE-AQEVPNTMIVAMLLLAALCVLIALS 491 ++ LA+TG + V F+K+YG+ F G P+ + A E M M +LA + A+ Sbjct: 422 IICLALTGAMVVYAFIKLYGVIFAGTPKDENIHNRACEKSFFMPFGMFILAFSSIYFAVF 481 Query: 492 ASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLW 551 A+ + + ++ + + P++++LL+ A+ L L+ L+ Sbjct: 482 ANNIILFLGNVVLYLVPQ---------TMYSMNINVISMPAIMILLIFALALPFLLFGLF 532 Query: 552 CRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGL 611 + R + WACG+ + M+ + N + + + S + + + + + Sbjct: 533 GANMSKV--RASEPWACGFKFSPQMSMNSNSFVGDFKRLISKVIKFKTETK-----QQNY 585 Query: 612 AHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLIA 669 TE W + + PI+ +A +I Q+G Y +Y++ L +L+ Sbjct: 586 FSNVDYKTGTEDVWWKILYEPIIKFNMLIADKIGAFQNGRSSFYVVYILVYLYAMLVV 643 >UniRef50_A6UVK0 NADH dehydrogenase (Quinone) n=2 Tax=cellular organisms RepID=A6UVK0_META3 Length = 723 Score = 386 bits (993), Expect = e-105, Method: Composition-based stats. Identities = 214/665 (32%), Positives = 356/665 (53%), Gaps = 26/665 (3%) Query: 7 LTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAP 66 + + + + L + +L+ +S + +G + G + I + + + Sbjct: 72 MLICISIIVLGGLLGVLFSKWFKLSKIISILIISMGSLFGTYNAIMVILNNKSYELTYLV 131 Query: 67 PFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFF-MNIFIASM 125 ++ ++D +S F V+ L+ ++ ++YS YM + + K A + + +ASM Sbjct: 132 E-SIIPISFKIDPISMFFSAVVLLVSIMAAIYSYGYMDDKKRKLATGFQYLNFAVLVASM 190 Query: 126 VALLVMDNAFWFIVLFEMMSLSSWFLVIARQ-DKTSINAGMLYFFIAHAGSVLIMIAFLL 184 V + + +N+ F++ +E+MS+SS+ LV+ + +G +Y HAG + I +F L Sbjct: 191 VGVTISNNSIIFLLFWELMSISSFLLVMFDGFKEEVRKSGYIYLIYTHAGGMFIFASFAL 250 Query: 185 MGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASA 244 +GS+ F F + L AVFLL F GF +KAG+ P HSWLP AHP APSH SA Sbjct: 251 AYVATGSISFDQFSN--MPDYLKIAVFLLGFVGFASKAGVFPFHSWLPYAHPVAPSHVSA 308 Query: 245 LMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLL 304 +MSGVM+K+GI+G + M +L ++ G +V+ +G +S +LGV YALA+ DIKRLL Sbjct: 309 VMSGVMIKMGIYG---IIMLILLLGINNIYIGYMVLILGILSGILGVAYALAQHDIKRLL 365 Query: 305 AWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIIS 364 A+S++EN+GIIL+ +G+ ++G H+ + ++G GAL H+LNHALFK LLF+GAGA+I Sbjct: 366 AYSSIENIGIILIGLGIGLIGKYYHNETIALLGFAGALLHILNHALFKSLLFMGAGAMIK 425 Query: 365 RLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVA 424 TH +E MG L KRMP T+ LIG LAIS IPP NGF+SE + F+ ++V Sbjct: 426 STGTHSLEGMGGLMKRMPTTSLVFLIGSLAISGIPPFNGFVSELLIYMGGFN-GLNDSVG 484 Query: 425 LQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAAL 484 L +A ++ L + GGLA CF K+ GI+F GAP++ + A+ P+ M V +LLA + Sbjct: 485 LLIASTFGIIALVLIGGLATACFTKVLGISFLGAPKTKASANAKASPHVMSVPQILLALI 544 Query: 485 CVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLL 544 C++I + I+ IA++ +N T S +++ P + ++L+ + L Sbjct: 545 CIIIGIFPILFVNPIIKIANS-SNLAGITACSQLSVFPN------LTGVYIILIALVSLF 597 Query: 545 PGLYWLWCRSRRAAFRRTGDAWACGYGWENA-MAPSGNGVMQPLRVVFSALFRLRQQLDP 603 L ++ +++ G W CGY + M + + P+ F ++ P Sbjct: 598 VVLRMIYYKNKIV----DGYTWDCGYSNPTSKMQYTASSYASPIVEFFKPFVIIKTHEKP 653 Query: 604 TLRLNKGLA-HVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAA 662 + A + + E ++ +I+PI I++L+ G+F Y YV+ Sbjct: 654 VKGIFPHEAKYHSHSKDLAEAVFELLLIKPISVGL----SVIRYLKDGNFNYYMGYVIII 709 Query: 663 LVVLL 667 + +LL Sbjct: 710 ISLLL 714 >UniRef50_A5FPH4 NADH dehydrogenase (Quinone) n=5 Tax=Dehalococcoides RepID=A5FPH4_DEHSB Length = 644 Score = 385 bits (988), Expect = e-105, Method: Composition-based stats. Identities = 203/653 (31%), Positives = 345/653 (52%), Gaps = 36/653 (5%) Query: 23 FLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAPPFEFADLTLRMDSLSA 82 + + + ++ + ++ G Q+ G L D+ +D L++ Sbjct: 21 IVFNHGSKKVWQGVLWLVIAAALCLLIGSLQIFFGNPLDISLWSIASGLDIAFHLDRLAS 80 Query: 83 FMVLVISLLVVVCSLYSLTYMRE-YEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLF 141 F V++ISL+ + ++YSL Y + A + FM +FI SM+ ++ N F I + Sbjct: 81 FFVIIISLISLCVAVYSLGYNNHISSNERANLLSAFMAVFILSMIGVVASANTFSLIFFW 140 Query: 142 EMMSLSSWFLVI-ARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRTL 200 E+M+LSS+FL++ Q+ + AG+ YF + ++ +M+ ++M ++GS + Sbjct: 141 EIMALSSFFLMMNDYQEPFTQRAGVYYFVLTQLSTIFLMLMAVVMYIQNGSF---ALSLS 197 Query: 201 SLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILK 260 S + S VF+LAF FG KAG++PLH WLP AH A+PS+ SALMSGVM+K+ I+G+++ Sbjct: 198 GASSVIQSLVFVLAFLAFGIKAGIIPLHKWLPYAHSASPSNVSALMSGVMLKVAIYGLVR 257 Query: 261 VAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVG 320 MD+L+ +WWG+ ++ +G ISALLG++YA E D+K LLA+ ++EN+GIIL+ +G Sbjct: 258 FLMDVLSP---EMWWGVGILLLGMISALLGIIYAFKEHDLKMLLAFCSIENIGIILMGIG 314 Query: 321 VAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKR 380 + ++ L ++ L ALFH LNHA+FK LLF+ AG+++ + ++EKMG L K Sbjct: 315 LYVIFGLYGLDTLAMLALGSALFHSLNHAIFKSLLFMTAGSVVIAVGDRNIEKMGGLIKL 374 Query: 381 MPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTG 440 MP+T+ L+G ++ISA+PP NGF+SE ++S F + ++++ + +LA+T Sbjct: 375 MPYTSVIFLVGAVSISALPPFNGFMSELMLFESFFQSFSLAESSIKILLFSVLAILALTS 434 Query: 441 GLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIM 500 LA CFVK +G F PRS A A+EV +MI+ +LA C+++ L A +I Sbjct: 435 ALAAACFVKAFGTVFLAMPRSQEAASAKEVSKSMIIGPAILAVACLVLGLFAV----QIF 490 Query: 501 HIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFR 560 +A + P + L+ L + + L + R Sbjct: 491 SVAGYSFDLPDMS----------------------LVGLVLVIFGVLVFGMVRLFSPRKS 528 Query: 561 RTGDAWACGYGWE-NAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTAR-A 618 R + WACGY + +G +PL +F ++R R + + N+ + A Sbjct: 529 RRSETWACGYVRPTPRFEYTASGFAEPLFQIFRLIYRTRHYNERSYEDNQQAIFKQGKSA 588 Query: 619 QSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLIAIA 671 T F+DE + P+ R+++ I LQ D + LY ++++++A Sbjct: 589 IHTIKFFDEYIYLPVAGLFGRISRFISRLQDVDLGSHILYSFITVLLVILAAR 641 >UniRef50_C6MX91 NADH dehydrogenase (Quinone) n=1 Tax=Geobacter sp. M18 RepID=C6MX91_9DELT Length = 657 Score = 378 bits (972), Expect = e-103, Method: Composition-based stats. Identities = 216/669 (32%), Positives = 343/669 (51%), Gaps = 24/669 (3%) Query: 2 DALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLV 61 D L+ ++ L + L L +L L +L+ + +L ++ + S + L +G Sbjct: 8 DPASLVLCAIALAGCSGLPGL-VLRRGSLGQRLASVAALTSSLLALPSLLYLLLSGGEAS 66 Query: 62 ARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIF 121 F + +D LS F ++ I L+ SLY+L Y ++ FF + Sbjct: 67 FTLNWNLPFGPCEVALDPLSLFFLIPIFLVFPAGSLYALGYWPAASHSSEKSVTFFYGLL 126 Query: 122 IASMVALLVMDNAFWFIVLFEMMSLSSWFL-VIARQDKTSINAGMLYFFIAHAGSVLIMI 180 +M ++V N F++ +E M+LS +FL + ++ +AG++Y +H G +++ Sbjct: 127 AFAMALVVVARNGALFMMAWETMALSGYFLLIAEHREGEVRSAGLVYLVASHLGGAALLL 186 Query: 181 AFLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPS 240 F + R +G F + +L+L+ GLA +F LA GFG+KAG+MPLH WLP AH APS Sbjct: 187 LFASLFRITGGFGFPAAHSLALAAGLAGTIFALALAGFGSKAGLMPLHLWLPSAHANAPS 246 Query: 241 HASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDI 300 H SAL+SGVM+KIG++GIL+V PLWWG L+ A G SA++G+ A A++DI Sbjct: 247 HVSALLSGVMLKIGVYGILRVISFF---PERPLWWGALLTAAGLTSAVMGICVASAQKDI 303 Query: 301 KRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAG 360 KRLLA+S++EN+GI+ +G+ ++G + L +GL GALFH+LNHA+FK LLF AG Sbjct: 304 KRLLAYSSIENLGIVTTGIGMFLLGQGTGNHRLAFLGLAGALFHVLNHAIFKPLLFFCAG 363 Query: 361 AIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRV 420 +++ T D+++MG LA+R+P+TA L G +AI +PP NGF SE + F +R Sbjct: 364 SVMHATGTRDLDRMGGLARRLPFTAFFALCGAVAICGLPPFNGFASEMLLYLGFFGEARA 423 Query: 421 EAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLL 480 L L P+ LA+ GG+AV+ FVK+YGI F GAPR+ A E +M+ + L Sbjct: 424 GQPYLALGAPV----LAMVGGVAVLSFVKLYGIAFLGAPRTEAAAHGHEATGSMLAPISL 479 Query: 481 LAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLA 540 LA L +L L + V P + + Sbjct: 480 LAFLALLGGLFPQLFLALVQPALRQLAPDAAHFGT-----------LPVQPFWFAVAGGS 528 Query: 541 MPLLPGLYWLWCRSRRAAFRRTGDAWACGYG-WENAMAPSGNGVMQPLRVVFSALFRLRQ 599 + L L +L+ + + +G W CGY + +G+ + AL R R Sbjct: 529 VICLALLLFLFLQRKVKGHASSGPTWGCGYLCPSPRIQYTGSSFGAFFSSLSGALIRTRI 588 Query: 600 QLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYV 659 LDP L A ++ + E R++ P+++ ++ LQ G+ ++Y LY+ Sbjct: 589 TLDPVTGLAPAAARMSY---APEETLLHRLVLPVLNIAGIACAFVRRLQHGEVQIYILYI 645 Query: 660 VAALVVLLI 668 L++LL+ Sbjct: 646 FVTLMLLLL 654 >UniRef50_C5A2R1 Formate hydrogenlyase II subunit D (Mhy2D) n=1 Tax=Thermococcus gammatolerans EJ3 RepID=C5A2R1_THEGJ Length = 694 Score = 378 bits (972), Expect = e-103, Method: Composition-based stats. Identities = 187/597 (31%), Positives = 294/597 (49%), Gaps = 32/597 (5%) Query: 1 MDALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGV-T 59 M +L T ++ILYL + LA L L R +I + + + + + + ++ L + Sbjct: 1 MKMKELFTLTVILYLISILAVLPLRKNYRASITVGHVFTGLASLSLLAFTVSVLPEALKG 60 Query: 60 LVARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGF-FM 118 F A + +D LS + LV+ L + S+YS YM YE G + Sbjct: 61 KAIEFTYDLGVAKIPFHVDGLSLILCLVLGSLGLATSIYSPKYMEFYERFGRGWLYVVLY 120 Query: 119 NIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSIN-AGMLYFFIAHAGSVL 177 + F+ SMV ++ N WF+ +E+M+ +S+ L++ D+ + AG YF H S L Sbjct: 121 STFVLSMVLIVTTSNFLWFVFFWEVMTFTSYLLMVWENDEEYVRKAGWKYFVTMHVASTL 180 Query: 178 -IMIAFLLMGRESGS---LDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPR 233 +++A L+ ++GS L+F + L L P +LL GFG+KAG++PLH WLP Sbjct: 181 PLIVALALLYAKAGSIEGLNFDNLSKLHLGP----IYYLLFLVGFGSKAGVVPLHFWLPD 236 Query: 234 AHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLY 293 AHPAAPS+ SAL+SG M+K+ ++G+++ +L GL +G +V +G ++ +G LY Sbjct: 237 AHPAAPSNVSALLSGAMIKVAVYGLIRTTCFIL---GLNETFGYIVAILGTVTLTVGTLY 293 Query: 294 ALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDP--LLTVVGLLGALFHLLNHALF 351 AL + D KRLLA+ +V +G I L VG + ++ + + L+HL+NHA+F Sbjct: 294 ALKQTDAKRLLAYHSVGQMGYIWLGVGAGIALMAKGGSYAAFGAIAMAAGLYHLVNHAIF 353 Query: 352 KGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTW 411 KGLLFL AG+++ R HT ++ +G LAK MP TA I ++I+ PP NGF+S+W + Sbjct: 354 KGLLFLSAGSVLYRTHTRELNVLGGLAKLMPLTALFTFIAAMSIAGEPPFNGFMSKWMIY 413 Query: 412 QSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVP 471 Q F V VM + FVK Y F G P + E A+EVP Sbjct: 414 QGTFLSGDGLLV-------FCGVMALFISAATLASFVKFYTTAFGGVP-TKVTENAEEVP 465 Query: 472 NTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPA--------TVASGIALVPG 523 ++M+V LAALC+L L S + P ++ T T + V +P Sbjct: 466 SSMLVGKGFLAALCLLFGLIPSSIIPLLLAPGKVLTGTDLSGWISTKYWLVTIKAPGMPS 525 Query: 524 TFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSG 580 T P LL+ +L + + + + TG+ + AM G Sbjct: 526 GGETYFNPWLLVGVLGVLAGAMLVSYPNRPKKVVKVWTTGEPVRMEHYKLKAMHYYG 582 >UniRef50_B3E6C5 NADH dehydrogenase (Quinone) n=4 Tax=Desulfuromonadales RepID=B3E6C5_GEOLS Length = 666 Score = 377 bits (968), Expect = e-103, Method: Composition-based stats. Identities = 214/638 (33%), Positives = 329/638 (51%), Gaps = 19/638 (2%) Query: 34 LSGITSLVGGVIGIISGITQLHAGVTLVARFAPPFEFADLTLRMDSLSAFMVLVISLLVV 93 LS + + G+ + L P F L +D LSA +L + L + Sbjct: 41 LSVCITACAALWGMAGALQILGGAPATRYLLDWPLPFGPSELSVDPLSALFLLPLLLAAL 100 Query: 94 VCSLYSLTYM-REYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLV 152 CSLY L Y+ + + F + +ASM +LV + ++ +E+M+LSSW L+ Sbjct: 101 CCSLYGLAYLPAAVQPAVEKRVTLFSGLLLASMALVLVARDGLLLLIAWEVMALSSWLLL 160 Query: 153 IARQDKTSI-NAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRTLSLSPGLASAVF 211 + Q + AG +Y H GS+ + + F L+ E+GS F + +L+L + + Sbjct: 161 MTDQQNLQVQRAGTVYLLATHTGSMALYVFFALLKGETGSFAFPAAHSLALGGTVTLVML 220 Query: 212 LLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGL 271 + A GFGAKAG+MPLH WLP AH APSH SALMSG+M+K+GI+GI++ L Sbjct: 221 VAALIGFGAKAGIMPLHIWLPGAHANAPSHVSALMSGIMLKVGIYGIIRAVSFF---QQL 277 Query: 272 PLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDP 331 P+W+G LV+ +GA+SA+ G+ A A++D+KRLLA S++EN+GII + +G+A+VG+ D Sbjct: 278 PVWFGWLVLLLGAVSAITGIALASAQRDLKRLLACSSIENIGIICIGLGMALVGIQSGDR 337 Query: 332 LLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIG 391 +L ++GL GA H++NHALFK LLFLG+GAII T +++MG L++ +P TA L+G Sbjct: 338 VLAILGLAGAFIHIINHALFKPLLFLGSGAIIHATGTRQIDRMGGLSRILPRTAPLFLVG 397 Query: 392 CLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMY 451 LAI +PPLNGF+ E + + FS + + + +LA+ GGLAV+ FVK+Y Sbjct: 398 SLAICGLPPLNGFVGELFLYFGAFSDGMLADLPVIG---FVAPILALVGGLAVITFVKLY 454 Query: 452 GITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPP 511 G F G PR E P M++ M LLA +C+L + A L + + P Sbjct: 455 GAVFLGVPRDPELAHGHESPLAMLLPMGLLAGICLLAGIGAPLLLQLVAPAVIQYAGVSP 514 Query: 512 ATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGY- 570 + VP T + LL ++LL ++ +W + A W CGY Sbjct: 515 LLFSQVAGAVPLQQLTLLNGLLLAVILL-------VWLIWRFLVQRAPLAVSSTWGCGYL 567 Query: 571 GWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVI 630 M +G+ + + + S L R +L L+ T +++I Sbjct: 568 APTPRMQYTGSAFSELITGLISGLVGSRGRLSG---LSGAFPASARFVSITTERILDQMI 624 Query: 631 RPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLI 668 P + ++ +Q G LY LYV A L VL++ Sbjct: 625 IPSLQGADWCLAWLRRMQHGHLHLYILYVFATLFVLMV 662 >UniRef50_B4UA31 NADH dehydrogenase (Quinone) n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4UA31_HYDS0 Length = 633 Score = 377 bits (968), Expect = e-103, Method: Composition-based stats. Identities = 185/619 (29%), Positives = 324/619 (52%), Gaps = 37/619 (5%) Query: 51 ITQLHAGVTLVARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKG 110 + L L + + +D LS F + +++ + S+Y+L Y+ E Sbjct: 43 VAYLWGVADLSIHLNTTIKHITYSFYVDRLSLFFIGIVAFNGAINSIYTLDYIEEENYDK 102 Query: 111 AAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIA-RQDKTSINAGMLYFF 169 M NIFI SM+ +L+ NAF F++ +E+MS+ S+FLV+ + + + A ++Y Sbjct: 103 KILMTMLKNIFILSMILVLLSANAFTFLLFWEVMSILSFFLVLWDFKKEENYKASLIYIV 162 Query: 170 IAHAGSVLIMIAFLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHS 229 + H G+ I+++F+ + SL F ++ LSL+ + +FL + GFG KAG++ LH+ Sbjct: 163 MTHIGTAFILLSFVGFYINTNSLSFDHWQNLSLNTFWTTWIFLFSVLGFGMKAGIIGLHN 222 Query: 230 WLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALL 289 WLP+AHP APS SALMSG+M+K+ ++ ++ + Q P +G+L++ IG I+ L Sbjct: 223 WLPKAHPVAPSFVSALMSGLMIKMPVYMFIRYWFYFIKQ--YPASFGLLILTIGTITMLF 280 Query: 290 GVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHA 349 G+L A + +K +LA+S++EN+GII + +G+AM+ SL+ L + L +LFH+LNH+ Sbjct: 281 GILNASVQNRLKAMLAYSSMENIGIIYVGIGLAMIFKSLNVEYLYALALGASLFHILNHS 340 Query: 350 LFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWY 409 LFK LLF+ AG++++R HT ++ K+G K P L+G L++ A+PP NGFISEW Sbjct: 341 LFKSLLFMSAGSLMARAHTQEIAKLGGAIKYAPKLGTITLVGMLSLVALPPFNGFISEWL 400 Query: 410 TWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQE 469 +QSL +V+ L +A P++ LA+TGG+A++ VK +G+TF G PR + ++ Sbjct: 401 LYQSLLLSLKVKGYYLWIASPLSASFLALTGGIAMLSAVKYFGLTFLGNPRKD-IKRKED 459 Query: 470 VPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQV 529 + +++M +LA C+L+ + ++ I ++ P +GI + + Sbjct: 460 IKTMSLISMGILALSCLLVGVLPVFVLDVINNL------IPVPIHVNGIFEIKTPENFGS 513 Query: 530 TPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWEN-AMAPSGNGVMQPLR 588 + +L+ LL +Y S+ + + + WACG + S G QP++ Sbjct: 514 IAPFFIGILMVFMLLISIYLNKYISKHSIYYK---TWACGQEDVPLSAQYSPEGFSQPIK 570 Query: 589 VVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQ 648 + S L++ +D S +L +Q Sbjct: 571 KITSKLYK-----------------------DGLDIFDGIYGFIAKSLLNKLQTLKYKIQ 607 Query: 649 SGDFRLYCLYVVAALVVLL 667 +G +Y LY+ L++L+ Sbjct: 608 TGVIHVYILYMAITLIILI 626 >UniRef50_C8XAR9 NADH/Ubiquinone/plastoquinone (Complex I) n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XAR9_NAKMY Length = 674 Score = 377 bits (968), Expect = e-103, Method: Composition-based stats. Identities = 214/646 (33%), Positives = 324/646 (50%), Gaps = 11/646 (1%) Query: 33 KLSGITSLVGGVIGIISGITQLHAGVTLVARFAPPFEFADLTLRMDSLSAFMVLVISLLV 92 L GI VGG+ +++GI + G T+ L +D L + V + Sbjct: 32 TLVGIGLAVGGLAALVAGIAAMQ-GQTVTWAAPHLLPLFGLLFTVDPLGGVFLAVTGGVS 90 Query: 93 VVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLV 152 LY + Y RE+ G A + + +F+ +M+ + + + ++++E+M+L+S LV Sbjct: 91 AAVGLYGIGYCREH-GLDARGVQAVLPLFVLAMMLVPLAASVGTLLLVWELMALTSLLLV 149 Query: 153 I--ARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRTLS--LSPGLAS 208 + R+ +AG Y + H G V I+I L+ + FA+ R + LSP +A Sbjct: 150 VAEHRRRPEVASAGRWYAVMTHLGLVAILIGLLVFAAHAADGSFAALRAAAPGLSPAVAG 209 Query: 209 AVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQ 268 VF+ GFG+KAG++PLH+WLPRAHP APS+ SALMS MV +GI+GI++V DLLA Sbjct: 210 LVFVATGIGFGSKAGIVPLHAWLPRAHPEAPSNVSALMSAAMVNLGIYGIVRVGFDLLAG 269 Query: 269 TGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSL 328 WW +LV+ +GA SA+ G+L A ++KRLL ST EN+G++L+ VG A + Sbjct: 270 ADTGWWW-LLVLGLGAGSAIYGILQAAVGTNLKRLLGNSTTENMGLVLIGVGAAGFFGTT 328 Query: 329 HDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAAC 388 +P L + L AL HL+NHA FK +LF AGA+++ D++ +G L RMP T A Sbjct: 329 GNPPLAGLALAAALLHLVNHAAFKTVLFQAAGAVVAATGRRDLDDLGGLNTRMPATTTAF 388 Query: 389 LIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFV 448 IG LA SA+PP F+SEW Q+L VA + P+A+ +A+T GLAV FV Sbjct: 389 GIGALAASALPPGAAFVSEWLLLQALIHGLPAAGVAGAIVLPLAVAAVALTAGLAVATFV 448 Query: 449 KMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTN 508 K +GI F PR+ AE A E P TM+ M L A CV +AL+ + + P + +A A Sbjct: 449 KAFGIGFLAKPRTVEAERATERPATMLAGMGLAATACVALALAPTLVLPTLGAVAGATVG 508 Query: 509 TPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWAC 568 P G+ + ++P +L L LL ++ + R W C Sbjct: 509 APDPVQVQGLTIELVGVAGSLSPLMLTLALLLGMVVALAGVRALAT--RRQARAARLWDC 566 Query: 569 GYGW-ENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLN-KGLAHVTARAQSTEPFWD 626 G G M + +PL+ VF + R +D T + L + + Sbjct: 567 GGGPLSARMEYTATSFAEPLQRVFDDVVRAEHDIDVTHHDEARYLVQQIEYRRRVPDRIE 626 Query: 627 ERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLIAIAV 672 R+ +P++ A + + L +G Y A L LLI + V Sbjct: 627 RRLYQPVLQAVAAWGRAGRRLSTGSVHRSLGYGFATLCGLLILLVV 672 >UniRef50_A7HGW4 NADH dehydrogenase (Quinone) n=4 Tax=Anaeromyxobacter RepID=A7HGW4_ANADF Length = 654 Score = 372 bits (956), Expect = e-101, Method: Composition-based stats. Identities = 211/599 (35%), Positives = 311/599 (51%), Gaps = 15/599 (2%) Query: 72 DLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYE-GKGAAAMGFFMNIFIASMVALLV 130 L LR+D+LSA +L I + + ++Y L Y R+ G + + F + A MV L+ Sbjct: 62 GLGLRVDALSAIFLLPICAVSALGAIYGLGYHRQAALGARSVRLQIFYGLTTAGMVLLVS 121 Query: 131 MDNAFWFIVLFEMMSLSSWFLVIARQDKTSI-NAGMLYFFIAHAGSVLIMIAFLLMGRES 189 +A F+V +E+M+L + LV ++ + A +Y H G++ + F L+ + + Sbjct: 122 ATSAIVFLVGWEVMALGGFLLVHTDHERAEVQRAAFVYLAATHVGTLALFALFALLRQAT 181 Query: 190 GSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGV 249 G+ D LS S +A F LA GFG KAG+MPLH WLP AH AAPSH SALMSGV Sbjct: 182 GTFDLGGMAGLSGSGPVARGAFALALLGFGMKAGVMPLHFWLPGAHAAAPSHVSALMSGV 241 Query: 250 MVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTV 309 ++K G++G+L+V P WG ++ +G SA+LGV +ALA+ D+KRLLA+ +V Sbjct: 242 LIKTGVYGLLRVTGLF---DAPPAAWGTALLVLGGASAVLGVAFALAQHDLKRLLAYHSV 298 Query: 310 ENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTH 369 ENVGII+L G+A++G + +P L +GL GA H++NHALFK LLFLGAGA+ T Sbjct: 299 ENVGIIVLGAGLALLGRARGEPALVALGLGGAALHVVNHALFKSLLFLGAGAVQHATGTR 358 Query: 370 DMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAG 429 +++++G LA+ M TA L+G AIS +PPLNGF+SEW + + L Sbjct: 359 ELDQLGGLARPMRATATLFLVGAAAISGLPPLNGFVSEWLVYLGFLAAMERGGDDLLAFA 418 Query: 430 PIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIA 489 + + LA+ GGLA CF K+ G+ F G+PR+ HA A E P M+V M +LAA C I Sbjct: 419 VLGVPALALVGGLAAACFAKVVGVVFLGSPRTAHARAAHEAPRAMLVPMAVLAAACAAIG 478 Query: 490 LSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYW 549 L+ + + P ++ A A++ PA +A A + A+ L+ G Sbjct: 479 LAPAAVLPALVRAASAWSRLDPAILAGDAARASAAAWRV------SAVAAALLLVAGGMV 532 Query: 550 LWCRSRRAAFRRTGDAWACGYGWEN-AMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLN 608 L R A + W+CGY M +G+ + L FS R + RL Sbjct: 533 LLRRRLGAPRAPGVETWSCGYSAPTARMQYTGSSFAEALVRRFSWAIFPRGEP---PRLG 589 Query: 609 KGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLL 667 A + + P A + LA + L + L V+A LV +L Sbjct: 590 GPFPGEAAFHTEVPDTVLDLALAPGARAVRWLATQAHLLYLRRIQFQVLLVLATLVAVL 648 >UniRef50_C6NX32 Hydrogenase-4 component B / Formate hydrogenlyase subunit 3 n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NX32_9GAMM Length = 668 Score = 371 bits (953), Expect = e-101, Method: Composition-based stats. Identities = 215/683 (31%), Positives = 344/683 (50%), Gaps = 29/683 (4%) Query: 1 MDALQLLTWSLILYLFASLASL--FLLGLDRLAIKLSG-ITSLVGGVIGIISGI-TQLHA 56 M L W LI + ++ F+ LD A++L G +TS + VI + +G+ L Sbjct: 1 MTLPSALAWGLIAAALGPVVTILAFVPALDAKALRLGGFLTSTIMAVISLGAGLYALLQP 60 Query: 57 GVTLVARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGF 116 G F + +D LS F +L++ ++ SL+++ Y R + + Sbjct: 61 GSIPATTFGTHIPWQ---FHLDPLSGFFLLLLGVVGSTASLHAIGYFRATQSGELRRVLI 117 Query: 117 FMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLV-IARQDKTSINAGMLYFFIAHAGS 175 IF ++M+ +++ + F+V +E+M+LSS FL+ A + + A LY IAH G+ Sbjct: 118 PYPIFFSAMILVVLAAGVYTFMVAWELMALSSTFLILSASRAMAARRAAYLYLLIAHLGA 177 Query: 176 VLIMIAFLLMGR----ESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWL 231 + ++ AF+L+ R GS + SLSP A+ L+ GFGAK GM+PLH WL Sbjct: 178 LCLLGAFILLARGNPLSGGSFAVMAAAQQSLSPWATQAILGLSLLGFGAKLGMVPLHIWL 237 Query: 232 PRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGV 291 P AHPAAPS SALMS M+ + I+G+L++ +L+ G+ WG++ +A G ++A GV Sbjct: 238 PEAHPAAPSPVSALMSAAMLPMAIYGLLRLDWQILSAPGIG--WGVIWLAFGLLTAGFGV 295 Query: 292 LYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALF 351 L++ + D+KRLLA+S++EN+G++L+A+G+ + ++ L + L LF LLNHALF Sbjct: 296 LFSTLQSDLKRLLAYSSMENMGLVLVALGLGRIFVAEGWLSLAGLALCAGLFQLLNHALF 355 Query: 352 KGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTW 411 K LLFLG+G+++ + DM ++G L + MP T LI LAI+ +PPLNGF SEW Sbjct: 356 KSLLFLGSGSVLHSTGSVDMNRLGGLIRSMPQTTLLMLIATLAIAGLPPLNGFASEWLLL 415 Query: 412 QSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVP 471 Q+ + + +LQ+ P+A + L+ VK +G++F G PRS A E Sbjct: 416 QAFLLAPQAASGSLQIVLPLAAAGVVFVLALSSFAMVKGFGLSFLGRPRSNF--HAHEAS 473 Query: 472 NTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTP 531 AM LA CV++ + + +M + + T+ S AL P + Sbjct: 474 LWERTAMGCLALGCVVLGILPGMVTNGLMAVGRLLLRSDALTLQSPWALTPISAQRASYL 533 Query: 532 SLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYG--WENAMAPSGNGVMQPLRV 589 L+ + + ++ +W R R R AWACG+ + M S G QP Sbjct: 534 PGTFLVGITLAVILTFLLVWWRFGRPLRRV--PAWACGFAGSATSRMQDSPAGFSQPWLR 591 Query: 590 VFSALF--RLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHL 647 +F+ + RL+ + P R + H + + + PI L+K+ L Sbjct: 592 IFAPIHSGRLQTREIPEKRAPEWFVHF-------QDPFWHGLYLPIQKTALLLSKQSLRL 644 Query: 648 QSGDFRLYCLYVVAALVVLLIAI 670 Q G +Y LY L+VLL I Sbjct: 645 QQGKITIYLLYAFITLIVLLAVI 667 >UniRef50_B8IYV9 NADH dehydrogenase (Quinone) n=3 Tax=Desulfovibrio RepID=B8IYV9_DESDA Length = 682 Score = 364 bits (935), Expect = 6e-99, Method: Composition-based stats. Identities = 206/651 (31%), Positives = 322/651 (49%), Gaps = 17/651 (2%) Query: 30 LAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAPPFEFADLTLRMDSLSAFMVLVIS 89 A L G G + + + G + R TL +D LS +L + Sbjct: 32 RAANLLGSCGAAAGCLAGLCALAFAPWGEAVSLRLPWGLPVGACTLGLDPLSRIFLLPVF 91 Query: 90 LLVVVCSLYSLTYMREY--EGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLS 147 L +VC+L +R + AA FF + I + ++ +A F++ +E+MSL+ Sbjct: 92 GLGLVCALSGGMALRHTRPQEHNLAAHWFFYILLILGLALVMAARDAVLFMLAWELMSLA 151 Query: 148 SWFLV-IARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRTLSL---- 202 +FL+ D+ +A +Y AH G+V +M F+L+ + +G+ + ++ Sbjct: 152 PFFLIEFNDGDRQVRDASWVYLVAAHLGAVALMAFFVLLWQSTGTTSLDILQGGAVMQGV 211 Query: 203 ----SPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGI 258 G+ +A+F LA GFGAKAG++P+H WLP AHPAAPSH SAL+SG M+ G++GI Sbjct: 212 ARDAGSGVLTALFALAVLGFGAKAGLVPMHVWLPEAHPAAPSHVSALLSGAMINAGLYGI 271 Query: 259 LKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLA 318 ++ L A P WWG ++ +G + L+G+L AL + ++KRLLA+S+VEN+G++L+ Sbjct: 272 IRSLSLLAAPGAAPEWWGWTLLLLGLATGLIGILKALGQSNLKRLLAYSSVENMGLMLMG 331 Query: 319 VGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALA 378 VG ++GL+ + + +G G+L H+LNHA FKGLLFL AG ++ T ME++G L Sbjct: 332 VGAGLIGLACGNAWIATLGFAGSLMHMLNHAGFKGLLFLSAGEVLHATGTVRMEQLGGLQ 391 Query: 379 KRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAV 438 KR+P AA +G AI+ +PPLNGF E SL + V Q+ +A+V LA+ Sbjct: 392 KRLPLLGAAFALGAAAIACLPPLNGFAGELVLALSLLDGPSLPGVERQVGLLLALVTLAL 451 Query: 439 TGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPK 498 GLA + K YGITF G PRS A A+ + + L AA+CVL L+A Sbjct: 452 ISGLAAALYAKAYGITFLGEPRSGFAANARPAGWRTLWPLALPAAVCVLGGLAAPLFFDL 511 Query: 499 IMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAA 558 A P A +A + SL+ + L + L + RR+ Sbjct: 512 ASMTGLAALPMPNDMQAGALAGQEQMRASLAMVSLVGSIALGLALAGIVLRKRLLKRRSV 571 Query: 559 FRRTGDAWACGY-GWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTAR 617 + W CGY G + + G +PL +F+ L+ ++ RL Sbjct: 572 G--SMPTWGCGYQGGTARIQYTDAGFSEPLGKIFAPGMGLKVRMQLDSRLFP---DKGEM 626 Query: 618 AQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLI 668 + S + P+ +RL + +Q G LY LY++A +V LL+ Sbjct: 627 SVSAPDRLRRSIYDPLFEGIERLCNACKIMQHGKIHLYILYILATVVGLLV 677 >UniRef50_Q2RXM5 NADH dehydrogenase (Quinone) n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RXM5_RHORT Length = 674 Score = 362 bits (929), Expect = 3e-98, Method: Composition-based stats. Identities = 186/678 (27%), Positives = 307/678 (45%), Gaps = 32/678 (4%) Query: 1 MDALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTL 60 M Q+ + + + +L LA ++ + V + + +T L G Sbjct: 1 MSTTQVFLGAFAVLAALPVLTLLAGNRKSLAGSITLVGVGVACLAMLGLAVTALTVGPIA 60 Query: 61 VARFAPPFEF--ADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFM 118 P + L +D LSA V++IS+L +LYS+ Y+ Y + A Sbjct: 61 FDLGTVPLFGLTSSLAFTIDGLSAIFVILISVLGTASALYSVGYIAHYPDEDARRYYVPF 120 Query: 119 NIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIA-RQDKTSINAGMLYFFIAHAGSVL 177 +FIA M+ + + F F +E M+L S+FLV +DK +++AG +YFF+ S+ Sbjct: 121 PLFIAGMLMVATTSDWFCFFFGWEFMTLVSYFLVTFENRDKENLSAGFIYFFMTQLTSMG 180 Query: 178 IMIAFLLMGRESGSLDFASFRTL-----SLSPGLASAVFLLAFFGFGAKAGMMPLHSWLP 232 +M+A +++G GS FA+ + +P + L F GF KAGM PL WLP Sbjct: 181 LMLAIIVLGTWGGSTSFAAVAKTLGALQAENPVALYGLLSLFFIGFATKAGMFPLGIWLP 240 Query: 233 RAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVL 292 +AHPAAP+ SAL+SGVM+K+GI+G+L++ + L WG+++ G +S L+G L Sbjct: 241 KAHPAAPASVSALLSGVMIKLGIYGMLRIFLWALPLGEATHVWGMVITLFGVLSMLVGTL 300 Query: 293 YALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFK 352 AL E D KRLLA ++ +G +LL + + +PL +G LG L+HL+NHA FK Sbjct: 301 RALGEHDCKRLLAQHSIGQMGYVLLGL-GLGLTFLGSNPLFAALGFLGCLYHLINHACFK 359 Query: 353 GLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQ 412 LLF G+I+ R T D++ +G L+ MP TA L+G L+I+ PP NGF+S+W +Q Sbjct: 360 SLLFFNTGSILYRAGTRDLDSLGGLSAVMPLTAGCALVGALSIAGTPPFNGFVSKWLLYQ 419 Query: 413 SLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPN 472 S V + +A V+ G + + FVK G + G P Sbjct: 420 SAIFGDVSTPVYI-----LAAVVAIFIGTVTLASFVKYMGTAYLGTLPKRFVGSGFGCPR 474 Query: 473 TMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPS 532 +M + LA +C+++ + + ++ + + + VT + Sbjct: 475 SMEAVEVFLAVVCLVMGVFPGPVVATLLGVLDPAFAGAGVDLGPSVLSALPWSGLSVTSA 534 Query: 533 LLLLLLLAMPLLP-------GLYWLWCRSRRAAFRRTGDAWACGYGWENAMA-PSGNGVM 584 L + PL+ R W CG ++ + + Sbjct: 535 SGTTLTVFAPLVVIGGLAVSFALSALIHGAVKVPSRPAQIWNCGEEIDDELVRYRASSFY 594 Query: 585 QPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEI 644 P + + + ++ RQ PTL L L + D+ + PI + ++ +K I Sbjct: 595 SPFKKLIAPVY--RQHPFPTLSLPALLPRLLD--------LDKWLYFPIGALFRKSSKAI 644 Query: 645 QHLQSGDFRLYCLYVVAA 662 +G +LY + VA Sbjct: 645 SRAHTGVPQLYLSWQVAG 662 >UniRef50_D1B457 NADH/Ubiquinone/plastoquinone (Complex I) n=2 Tax=Campylobacterales RepID=D1B457_SULD5 Length = 646 Score = 361 bits (927), Expect = 4e-98, Method: Composition-based stats. Identities = 191/624 (30%), Positives = 331/624 (53%), Gaps = 25/624 (4%) Query: 37 ITSLVGGVIGIISGITQL-HAGVTLVARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVC 95 + + ++ + + I H TL+ + F A L R++ L F ++S++ Sbjct: 28 VGFGLASILSLYAAIFFFSHLSDTLIWKLPGSFISAPL-FRLEPLGMFFSFLVSMIAFAV 86 Query: 96 SLYSLTYMREYEGKGA-AAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIA 154 SL+S Y + YE K A N FI SM+ ++ DN F F++L+E+M+L S L++ Sbjct: 87 SLFSFDYAKFYEKKANLAVFASLFNAFILSMLLVVASDNVFSFMLLWEVMTLLSALLILI 146 Query: 155 RQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRTLSLSPGLASAVFLLA 214 K S M+Y IA G+ +M+A L+M + S +F+ F +++ G + +F+L Sbjct: 147 NDGKESSKNIMIYLGIAQIGAFCLMVALLIMASFADSFEFSHFNEMNIGFGASLTLFVLL 206 Query: 215 FFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLW 274 G G+KAGM P H WLP A+ PS+ASALMSGVM+K+ +F +K ++ L + Sbjct: 207 LVGLGSKAGMFPFHVWLPVAYCECPSNASALMSGVMIKVALFAFIKFSLLL----PQWVH 262 Query: 275 WGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLT 334 +G +++ +GA+S + G++YAL D K +A+S+ ENVGII L +G A GL + P L Sbjct: 263 FGYILLFMGALSCVFGIMYALVSNDYKASIAYSSCENVGIIFLGLGGAFYGLGANSPTLA 322 Query: 335 VVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLA 394 ++G + A FH+LNH++FK LLF+ +G + + T +M+ +G L K+MP T+ + +A Sbjct: 323 LLGFIAAFFHILNHSVFKSLLFMLSGNVYTATLTRNMDTLGGLHKKMPLTSLIFCVAVVA 382 Query: 395 ISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGIT 454 + A+PPLNGF SEW ++++ +A + A++ L++TG +A+M F K+YG Sbjct: 383 MCALPPLNGFASEWVIYKTMVMGGVDAGIASRFFFATAIIALSITGAMALMAFAKVYGSI 442 Query: 455 FCGAPRSTHA-EEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPAT 513 F G PR EE +EV ++ + LLA+LCV + L + + + Sbjct: 443 FLGLPREPQKMEEIKEVSFIRLLPLGLLASLCVGLGLFMNDVIGMLSR-----------M 491 Query: 514 VASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWE 573 V + I + H ++ LL++++L LLP + ++ R+T + WACG+ + Sbjct: 492 VFTLIPQTSQSVHGLISMPLLVMVMLLCALLPFFFLYLLKANHKVARQT-EPWACGFKYN 550 Query: 574 NAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPI 633 M N ++ S L R +++ +++ + T ++ + FW++ + P+ Sbjct: 551 PTMQIGSNAFTGDIKKALSFLLRYEREI----KIDGYFSKATYTHKTHDLFWEK-LYAPV 605 Query: 634 VSATQRLAKEIQHLQSGDFRLYCL 657 + +A +I Q+G LY Sbjct: 606 IDFIMVVADKIGVFQNGRTNLYAG 629 >UniRef50_P16429 Formate hydrogenlyase subunit 3 n=77 Tax=Bacteria RepID=HYCC_ECOLI Length = 608 Score = 360 bits (924), Expect = 1e-97, Method: Composition-based stats. Identities = 214/610 (35%), Positives = 339/610 (55%), Gaps = 31/610 (5%) Query: 1 MDALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTL 60 M A+ L+ + ++ A++ + L+ ++GI VG + +G T L V Sbjct: 1 MSAISLINSGVAWFVAAAVLAFLFSFQKALSGWIAGIGGAVGSLYTAAAGFTVLTGAV-- 58 Query: 61 VARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNI 120 + +++ L+A ++ + L + SLY++ + R + K G +N+ Sbjct: 59 --GVSGALSLVSYDVQISPLNAIWLITLGLCGLFVSLYNIDWHRHAQVK---CNGLQINM 113 Query: 121 FIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMI 180 +A+ V ++ N F+V+ E+M+L + FL ++ G L+F + G++L+ I Sbjct: 114 LMAAAVCAVIASNLGMFVVMAEIMALCAVFLT------SNSKEGKLWFALGRLGTLLLAI 167 Query: 181 AFLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPS 240 A L+ + G+LD L S ++LL GFG AG++PLH W+P+AH A + Sbjct: 168 ACWLLWQRYGTLDLRLLDMRMQQLPLGSDIWLLGVIGFGLLAGIIPLHGWVPQAHANASA 227 Query: 241 HASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDI 300 A+AL S V++KI G+L + L PLWWGI ++ +G I+A +G LYAL E +I Sbjct: 228 PAAALFSTVVMKI---GLLGILTLSLLGGNAPLWWGIALLVLGMITAFVGGLYALVEHNI 284 Query: 301 KRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAG 360 +RLLA+ T+EN+GIILL +G + G++L P L +GL+G L+HLLNH+LFK +LFLGAG Sbjct: 285 QRLLAYHTLENIGIILLGLGAGVTGIALEQPALIALGLVGGLYHLLNHSLFKSVLFLGAG 344 Query: 361 AIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRV 420 ++ R D+EK+G + K+MP + A L+G +A++A+PPLNGF EW +QS F LS Sbjct: 345 SVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSFFKLSNS 404 Query: 421 EAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLL 480 A +L GP+ V LA+TG LAVMC K+YG+TF GAPR+ AE A P M V+++ Sbjct: 405 GAFVARLLGPLLAVGLAITGALAVMCMAKVYGVTFLGAPRTKEAENATCAPLLMSVSVVA 464 Query: 481 LAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLA 540 LA CV+ ++A WL P + ++ + L +T V+ ++ LLL+A Sbjct: 465 LAICCVIGGVAAPWLLPML---------------SAAVPLPLEPANTTVSQPMITLLLIA 509 Query: 541 MPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQ 600 PLLP + C+ R R G AW CGY E +M + +G P++ F+ + +LR+ Sbjct: 510 CPLLPFIIMAICKGDRLPSRSRGAAWVCGYDHEKSMVITAHGFAMPVKQAFAPVLKLRKW 569 Query: 601 LDPTLRLNKG 610 L+P + Sbjct: 570 LNPVSLVPGW 579 >UniRef50_UPI00003845F5 COG0651: Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI00003845F5 Length = 581 Score = 356 bits (913), Expect = 2e-96, Method: Composition-based stats. Identities = 188/519 (36%), Positives = 285/519 (54%), Gaps = 8/519 (1%) Query: 37 ITSLVGGVIGIISGITQLH--AGVTLVARFAPPFEFADLTLRMDSLSAFMVLVISLLVVV 94 ++ + + GI L G + R+D+LSA ++V++L Sbjct: 4 FCCMIASLALLAGGIKHLGQTPGTGPAIILPIGLPWLAAHFRLDNLSALFMVVVNLASAA 63 Query: 95 CSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIA 154 S Y + Y + F +F+ M +L+ D+AF F+V +E MSLSSW LV+A Sbjct: 64 ASAYGIGYCSHLPE--PRRVTPFYPLFLFGMNTVLIADDAFMFLVAWEFMSLSSWLLVLA 121 Query: 155 -RQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRTLSLSPGLASAVFLL 213 ++ + A +Y +A G+ ++ F LM G+ F++ R L V LL Sbjct: 122 DHKNAENRRAAFVYLVMACFGTFCLLTCFGLMAGGEGAYSFSAMRAAKLDGIAGFLVVLL 181 Query: 214 AFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPL 273 A G G+KAG++PLH+WLP AHPAAPSH SALMSGVM K+ ++G++++ DL Sbjct: 182 ALLGAGSKAGLVPLHAWLPLAHPAAPSHVSALMSGVMTKVALYGLIRILFDLHGHVNWA- 240 Query: 274 WWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLL 333 WG +M IG I+A++GVLYA+ + D+K+LLA+STVEN+G++++ +G+A+ + L Sbjct: 241 -WGAAMMVIGGITAVMGVLYAILQDDLKKLLAYSTVENIGVVVIGLGLAIAFKGSGEKTL 299 Query: 334 TVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCL 393 + L+ L+H++NH++FK L FL AGA+I+ D+ K+G L KRMPW A L+G + Sbjct: 300 AALALVAGLYHIVNHSIFKTLWFLSAGAVITATGERDLGKLGGLTKRMPWNGVAALVGAI 359 Query: 394 AISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGI 453 AISA+PPLNGF+SEW +QSLF + A++ P+ MLA+ LA CFV+ YGI Sbjct: 360 AISALPPLNGFVSEWLIFQSLFKGPSLPHWAMKFGVPVVGAMLALAAALAAACFVRAYGI 419 Query: 454 TFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPAT 513 F G PRS A +A +VP TM + LLA LCV++ + + H+ T A Sbjct: 420 AFLGRPRSEAAAQAHQVPATMRWTVALLAVLCVVLGAIPVTITDALSHVVTPLTGVSFAV 479 Query: 514 VAS-GIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLW 551 A G + T+ + S +L++ L L Sbjct: 480 SADLGWPWLSPVSSTRGSYSGTVLVMTGAGLCAITLLLV 518 >UniRef50_B5QVA0 Formate hydrogenlyase subunit 3 n=43 Tax=Enterobacteriaceae RepID=B5QVA0_SALEP Length = 608 Score = 353 bits (906), Expect = 1e-95, Method: Composition-based stats. Identities = 211/581 (36%), Positives = 325/581 (55%), Gaps = 27/581 (4%) Query: 30 LAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAPPFEFADLTLRMDSLSAFMVLVIS 89 LSG + +GG +G + +T + F L++ L+A ++ + Sbjct: 26 FHKALSGWIAGIGGAVGSLCTAGAGFTALTSAVTVSGVMPFTGHMLQITPLNAIWLITLG 85 Query: 90 LLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSW 149 L + SL+++ + R + K G +N+ +A+ V +V N +V+ E+M+L + Sbjct: 86 LCGLFVSLFNIDWHRHPQVKAN---GLLINLLMAAAVCAVVASNLGTMVVMAEIMALCAV 142 Query: 150 FLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRTLSLSPGLASA 209 FL ++ G L+F + G++L+ IA L+ + G+LD + L S Sbjct: 143 FLTGGSKE------GKLWFALGRLGTLLLAIACWLVWQRYGTLDLGLLDQRAQQLPLGSD 196 Query: 210 VFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQT 269 ++LL GFG AG++PLH W+P+AH A + A+AL S V++KI G+L + L Sbjct: 197 IWLLGVIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTVVMKI---GLLGILTLSLLGG 253 Query: 270 GLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLH 329 PLWWG+ ++ +G I+A +G LYAL E +I+RLLA+ T+EN+GIILL +G + G++L+ Sbjct: 254 NAPLWWGVALLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIILLGLGAGVTGIALN 313 Query: 330 DPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACL 389 P+L +GL G L+HLLNH+LFK +LFLGAG+I R D+EK+G + KRMP + A L Sbjct: 314 QPVLIALGLTGGLYHLLNHSLFKSVLFLGAGSIWFRTGHRDIEKLGGIGKRMPVISIAML 373 Query: 390 IGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVK 449 +G +A++A+PPLNGF EW +QS F L A +L GP+ V LA+TG LAVMC K Sbjct: 374 VGLMAMAALPPLNGFAGEWVIYQSFFKLGNSGAFVGRLLGPLLAVGLAITGALAVMCMAK 433 Query: 450 MYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNT 509 +YG+TF GAPR+ AE A P M V+++ LA CV+ ++A WL P I Sbjct: 434 VYGVTFLGAPRTKEAENASCAPILMGVSVVALAICCVIGGVAAPWLLPMI---------- 483 Query: 510 PPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACG 569 ++ + L T HT V+ ++ LLL+A PLLP + + R R G AW CG Sbjct: 484 -----STAVPLPLETAHTTVSQPMITLLLVACPLLPFIIMAMFKGNRLPSRSRGAAWVCG 538 Query: 570 YGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKG 610 Y E +M + G P++ F+ + +LR+ L+P + Sbjct: 539 YDHEQSMVITAYGFAMPVKEAFAPVLKLRKWLNPVSLVPGW 579 >UniRef50_B5EKJ3 NADH dehydrogenase (Quinone) n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5EKJ3_ACIF5 Length = 660 Score = 350 bits (898), Expect = 1e-94, Method: Composition-based stats. Identities = 216/644 (33%), Positives = 329/644 (51%), Gaps = 26/644 (4%) Query: 28 DRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAPPFEFADLTLRMDSLSAFMVLV 87 RL LS +L+ V G + + P + ++D LS F +++ Sbjct: 35 CRLIFPLSSAVALLLAVTGFSA-----LTAPPDQLQLRGPLPALPWSFQIDPLSGFFLIL 89 Query: 88 ISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLS 147 + LL +L++ Y R G + + F+ M +L+ NAF F+V +E+M+L+ Sbjct: 90 LGLLAFAVTLFATGYFRALSGPALRRLMLQYHTFLLGMGLVLLAANAFTFLVAWEIMALA 149 Query: 148 SWFLVIARQDKT-SINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLD--FASFRTLSLSP 204 S+FLV+ ++ S +AG LY IAH G++ I++ F+L+ + + F++ L P Sbjct: 150 SYFLVVTEHEEPGSRHAGFLYLLIAHLGALAILLGFVLLAGAAIAQGGPFSAMLHAPLDP 209 Query: 205 GLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMD 264 ASA FLL FFGF AKAG++PLH WLP AHPAAP+ SALMSG M+++ +G+L+V Sbjct: 210 FWASAAFLLTFFGFSAKAGLLPLHIWLPDAHPAAPAPVSALMSGAMLQMAFYGMLRVDFL 269 Query: 265 LLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMV 324 L L WWG V+ +G +AL GVL+A A+ D+KRLLA+S++EN+G+I++A G+A++ Sbjct: 270 FLGN--LASWWGPFVLGVGLATALFGVLFAAAQTDMKRLLAYSSIENMGLIMVAFGLALI 327 Query: 325 GLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWT 384 + L + L AL+H LNHA FKGLLFLG+G+++ + M+++G L ++MP T Sbjct: 328 FRTHGLGALAALALAAALYHALNHAFFKGLLFLGSGSVLHGAGSVAMDRLGGLIRQMPQT 387 Query: 385 AAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAV 444 A L+G LAI+ +PPLNGF+SEW Q+ + L P+A + + LA Sbjct: 388 AFFMLLGTLAIAGLPPLNGFVSEWLLLQAFLLSPALPQSTLSAVLPLAASGVVLAVALAA 447 Query: 445 MCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAH 504 VK YGI F G R A A E AM LL+ C+ + L L + + Sbjct: 448 YAMVKFYGIAFLGQARG--AGHAHEGGRWERSAMALLSVACIFLGLFPGVLLNLLHPVLQ 505 Query: 505 AFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGD 564 TV G+ L P + ++ L +A L G +W R R Sbjct: 506 EMLGQ-SFTVQRGLWLTPVSAQRASYSPIIFFLGMATALGLGFLLIWSFFGRPLRRV--P 562 Query: 565 AWACGYG-WENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEP 623 AWACG+ AM S G QPL +F+ L++ +++D R + R Sbjct: 563 AWACGFPVRTPAMQDSSLGFAQPLLRIFAPLYQAEREVDGAGRWRMRIGEPLYRG----- 617 Query: 624 FWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLL 667 +P+ L+ ++ LQ G LY LY L++LL Sbjct: 618 -----FYQPLSLLAFWLSAQVLRLQQGRITLYLLYSFLTLLILL 656 >UniRef50_Q10880 Uncharacterized protein Rv0083/MT0090 n=15 Tax=Mycobacterium RepID=Y051_MYCTU Length = 640 Score = 349 bits (895), Expect = 3e-94, Method: Composition-based stats. Identities = 175/618 (28%), Positives = 297/618 (48%), Gaps = 9/618 (1%) Query: 57 GVTLVARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGF 116 G V + + + +D L F + + + Y + Y+R Sbjct: 29 GPVRVVHVGWLLPLSGVHIELDRLGGFFMALTGAVAAPVGCYLIGYVRRE--HLGRVPMA 86 Query: 117 FMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSIN-AGMLYFFIAHAGS 175 + +F+A+M+ + + F++ +E+M+++S LV++ + + AG+ Y + G Sbjct: 87 VVPLFVAAMLLVPAAGSVTTFLLAWELMAIASLILVLSEHARPQVRSAGLWYAVMTQLGF 146 Query: 176 VLIMIAFLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAH 235 + I++ +++ GS FA + G+ +AVF+L GFG+KAG++PLH+WLPRAH Sbjct: 147 IAILVGLVVLAAAGGSDRFAGLGAVC--DGVRAAVFMLTLVGFGSKAGLVPLHAWLPRAH 204 Query: 236 PAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYAL 295 P APS SALMS MV +GI+GI++ + LL P WWG+ ++A+G SAL GVL A Sbjct: 205 PEAPSPVSALMSAAMVNLGIYGIVRFDLQLLGPG--PRWWGLALLAVGGTSALYGVLQAS 262 Query: 296 AEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLL 355 D+KRLLA+ST EN+G+I LA+G A + + A+ H++ HA FK L Sbjct: 263 VAADLKRLLAYSTTENMGLITLALGAATLFADTGAYGPASIAAAAAMLHMIAHAAFKSLA 322 Query: 356 FLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLF 415 F+ AG++++ D++ +G LA+RMP T + L +P GF+SEW QSL Sbjct: 323 FMAAGSVLAATGLRDLDLLGGLARRMPATTVFFGVAALGACGLPLGAGFVSEWLLVQSLI 382 Query: 416 SLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMI 475 + + L P+A+ ++A+ GL+V K +GI F PRST AE A+E P +M Sbjct: 383 HAAPGHDPIVALTTPLAVGVVALATGLSVAAMTKAFGIGFLARPRSTQAEAAREAPASMR 442 Query: 476 VAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLL 535 M + A C+++A++ +AP + A A+V + ++ Sbjct: 443 AGMAIAAGACLVLAVAPLLVAPMVRRAAATLPAAQAVKFTGLGAVVRLPAMSGSIAPGVI 502 Query: 536 LLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACG-YGWENAMAPSGNGVMQPLRVVFSAL 594 + L R RR WACG M + +PL+ VF + Sbjct: 503 AAAVLAAALAVAVLARWRFRRRPAPARLPLWACGAADLTVRMQYTATSFAEPLQRVFGDV 562 Query: 595 FRLRQQLDPT-LRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFR 653 R ++ T ++ +A + ++R+ P+V A +A+ ++ +G Sbjct: 563 LRPDTDIEVTHTAESRYMAERITYRTAVADAIEQRLYTPVVGAVAAMAELLRRAHTGSVH 622 Query: 654 LYCLYVVAALVVLLIAIA 671 Y Y ++++L+ Sbjct: 623 RYLAYGALGVLIVLVVAR 640 >UniRef50_A6TVL4 NADH dehydrogenase (Quinone) n=2 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TVL4_ALKMQ Length = 694 Score = 348 bits (892), Expect = 6e-94, Method: Composition-based stats. Identities = 137/495 (27%), Positives = 243/495 (49%), Gaps = 25/495 (5%) Query: 66 PPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASM 125 P L+ ++D LS M +L + S+Y+ YM + +M++ + Sbjct: 147 PKLLGYGLSFKVDMLSFIMAATAGVLWFLVSIYAHDYMGIENHRN--RFYLWMSVTFGGI 204 Query: 126 VALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLM 185 + ++ + F + FE+M+ SS+FLV Q K SI AG Y ++ AG + I++ +L+ Sbjct: 205 LGTVMAGDLFTMFLFFEIMTFSSYFLVAHNQSKESILAGNSYIYMGVAGGLSILLGMILL 264 Query: 186 GRESGSLDFASFRTLSLSPGLASAVFLLAFFG-FGAKAGMMPLHSWLPRAHPAAPSHASA 244 +G+L+F + G + F G FG KAGM+PLH WLP+AHP AP+ ASA Sbjct: 265 YAYTGTLEFIPLASEIKDLGWVKYLMTGLFVGGFGIKAGMLPLHIWLPKAHPVAPTPASA 324 Query: 245 LMSGVMVKIGIFGILKVAMDLLAQTGLPLW------------WGILVMAIGAISALLGVL 292 L+SG+++K+G +GIL+V++ + + G +++ IG I+ ++GV Sbjct: 325 LLSGILIKVGAYGILRVSISFFVPSITEISGYADSLWEVSQKLGAVIIWIGIITMVVGVF 384 Query: 293 YALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFK 352 AL + ++K++LA+ ++ +G I++ +GVA +G G ++H++NHALFK Sbjct: 385 MALQQSNMKKMLAYHSISQMGYIVMGIGVATYLGYKG-----AMGFSGGIYHMVNHALFK 439 Query: 353 GLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQ 412 LLF+ G + R H DM K+G + ++MP+TA C+I L I+ +P NGF S+ Sbjct: 440 ALLFMVVGLVYLRTHELDMYKLGGMWRKMPFTAFLCIIAALGITGMPGFNGFASKSILHH 499 Query: 413 SLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPN 472 ++ + + A I V V F+K++ F G + + E Sbjct: 500 AIIEAYEYGHPSFRYAEMI----FTVVSAGTVCSFIKLFSFVFLGKCPEKYKDIEGE-KG 554 Query: 473 TMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPS 532 M +AM LA + + + +++ K + A PA + + + +T Sbjct: 555 MMDLAMGGLALMIIAVGQVPNFMMDKFIIPAARTFTYDPAFIDKYLVDMNFFNTADLTGM 614 Query: 533 LLLLLLLAMPLLPGL 547 + + L+ A + G+ Sbjct: 615 IWIYLMGAGIFIVGM 629 >UniRef50_B2A694 NADH dehydrogenase (Quinone) n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A694_NATTJ Length = 748 Score = 347 bits (891), Expect = 7e-94, Method: Composition-based stats. Identities = 146/556 (26%), Positives = 262/556 (47%), Gaps = 21/556 (3%) Query: 9 WSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARF-APP 67 +++ L S ++ + ++ KL I +++ + ++ + ++ Sbjct: 15 LPILIIFVPLLGSFGVILISSVSEKLRDIYTVIISAVPLVLLAVMYPLVQQGIVQYNIEW 74 Query: 68 FEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVA 127 F L R+DSL +ISL+ + +LY+ Y+ + FF + + Sbjct: 75 FLEIGLIFRLDSLGFLFTALISLIWFLATLYATEYISHEHNRN--RFYFFWLFTFGATLG 132 Query: 128 LLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGR 187 + V + F V FEMMSL+S+ LVI +DK ++ AG L+ F+ G + I+ +M Sbjct: 133 VFVTGDLFGLFVFFEMMSLTSYVLVIHEEDKDAMRAGNLFLFLGIGGGLAILFGLFIMYF 192 Query: 188 ESGSLDFASFRTLSLSPGLASAVFLLAFF-GFGAKAGMMPLHSWLPRAHPAAPSHASALM 246 +L+ A ++ G+ V LL F GFG KAG++PLH WLP+AHP AP+ ASA++ Sbjct: 193 NLETLEIAPMLGDMVAAGVNIPVLLLLFIIGFGIKAGIVPLHIWLPKAHPVAPTPASAIL 252 Query: 247 SGVMVKIGIFGILKVAMDLLAQTGLPLW---------WGILVMAIGAISALLGVLYALAE 297 SG+++K G++G+ +V + ++ WG+ + IG I+ +LG L AL + Sbjct: 253 SGLLIKTGVYGLWRVFLMVMGPASSQEVELYQQYITNWGMGLFWIGIITMVLGALMALLQ 312 Query: 298 QDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFL 357 K++LA+S+V VG I++ +G A+ + +G G + H++NHALFK LFL Sbjct: 313 TSAKKMLAYSSVSQVGFIIMGLGAAVYLGTDG-----PIGFAGGIMHVINHALFKACLFL 367 Query: 358 GAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSL 417 GAI R H D++++ + K+MP+ A +I L I+ +P NG+ S+ +L + Sbjct: 368 IVGAIFIRTHLLDIDRVRGMFKQMPFMGIAFIIAALGIAGVPLFNGYASKTILHHALSEV 427 Query: 418 SRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVA 477 S + A IA + T L V F+K++ F G V + V Sbjct: 428 SYLTP---GTAMFIADKIFVFTSALTVSYFIKLFRGLFLGKLPQEWQNTNFSVAPIIKVV 484 Query: 478 MLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLL 537 + + L + I + +++ + + A V S + + ++ +++ L Sbjct: 485 VSVFVVLIIAIGVFPNFVLEQFVMPTMAGFPYESEVVTSQLQGMDLFTSKDLSKVVVVFL 544 Query: 538 LLAMPLLPGLYWLWCR 553 + L + W R Sbjct: 545 IAGTITLADQKFHWSR 560 >UniRef50_Q11VC3 NADH dehydrogenase I chain L n=5 Tax=Bacteroidetes RepID=Q11VC3_CYTH3 Length = 636 Score = 347 bits (891), Expect = 8e-94, Method: Composition-based stats. Identities = 155/683 (22%), Positives = 283/683 (41%), Gaps = 74/683 (10%) Query: 7 LTWSLILYLFASLASLFLLGLD-RLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFA 65 W + L L + ++++ G I+ + AG L A Sbjct: 4 FVWLIPALPLLGFLILSLFNKHIPKSASGYIASAMMLGSFAIVLTLLCKAAGGDLTATTV 63 Query: 66 PPFEFAD-------LTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFM 118 F++ L+ ++D+LS + + +I+ + + +YS++YM ++ +G ++ Sbjct: 64 TVFDWIHVGDLKLALSFQIDNLSVWFMSIITGVGFLIHVYSISYM--HDDEGVTRYFSYL 121 Query: 119 NIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSIN-AGMLYFFIAHAGSVL 177 N+F+ SM+ L++ N +E + L S+ L+ + N A F + G + Sbjct: 122 NLFVFSMLLLVMGSNYVVMFTGWEGVGLCSYLLIGFWFKNQAYNDAAKKAFIMNRIGDLG 181 Query: 178 IMIAFLLMGRESGSLDFASFRTLSL-------SPGLASAVFLLAFFGFGAKAGMMPLHSW 230 ++ LL+ + SL+++ +L G+ A+ +L F G K+ +PL++W Sbjct: 182 FLLGMLLIYNQFKSLEYSVVFDQALKIINPNEPSGIIFAITMLLFVGAMGKSAQIPLYTW 241 Query: 231 LPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALL 289 LP A A P+ SAL + MV GI+ I + + + ++ +G +A+L Sbjct: 242 LPDAM-AGPTPVSALIHAATMVTAGIYMIARSNILY----SMAPCTLDIIYVVGTGTAIL 296 Query: 290 GVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHA 349 L L + DIK++LA+STV +G + +A+G+ G +FH+ HA Sbjct: 297 AALIGLTQTDIKKVLAYSTVSQLGFMFMAIGLG--------------GYSAGVFHVTTHA 342 Query: 350 LFKGLLFLGAGAIISRLH-THDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEW 408 FK LLFLGAG++I + D+ KMG L K++P T +I LAI+ IPPL GF S+ Sbjct: 343 FFKALLFLGAGSVIHAMGGEQDIRKMGGLMKKLPITFITFIIATLAIAGIPPLAGFFSKD 402 Query: 409 YTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRST--HAEE 466 F S P+ + L +M +TF G R T E Sbjct: 403 AILALAFESS-----------PLKWGLGVFAALLTTFYMFRMLFLTFFGEFRGTTHQKEH 451 Query: 467 AQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFH 526 E P M + +++LA L V+ H +N +A +P H Sbjct: 452 LHESPLLMTIPLMVLALLTVVSGF-----IEIPHVFVHEGSNWFSHYLAGANIALPAASH 506 Query: 527 TQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQP 586 +L+ + ++ + + Y + + PS + Sbjct: 507 LSAETEFVLMGSALVLVVLVIITTYVL----------------YVSKKTLPPSSEAELSF 550 Query: 587 LRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQH 646 + + F + + D T+ + + E + +R++ + Q K I++ Sbjct: 551 IDKLSYNKFYVDELYD-TIIVKPIAFLSDFTSTFIEKQFIDRIVNFSGKSVQWSGKTIRY 609 Query: 647 LQSGDFRLYCLYVVAALVVLLIA 669 +QSGD Y +++V +VV+L Sbjct: 610 IQSGDVNTYAIFMVIGIVVILFI 632 >UniRef50_B9XHI6 Proton-translocating NADH-quinone oxidoreductase, chain L n=2 Tax=Verrucomicrobia RepID=B9XHI6_9BACT Length = 636 Score = 346 bits (889), Expect = 1e-93, Method: Composition-based stats. Identities = 154/686 (22%), Positives = 281/686 (40%), Gaps = 75/686 (10%) Query: 3 ALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVI-----GIISGITQLHAG 57 ++ W ++ S+A + L+ + ++S S+ V+ I+ + Q Sbjct: 5 PIEKFAWLILFLPLVSVALISLIPGIKSRPRVSAQISIAAVVVCFLLTSILYFVLQNSGQ 64 Query: 58 VTLVARFAPPFEF----ADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAA 113 A + D+ L++D+LS M+L+++ + + ++S YM+ G + Sbjct: 65 QQFPQITATWLQVDYLRIDIGLKLDALSMMMMLIVTGVGGLIHIFSWEYMKGDPG--YSR 122 Query: 114 MGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKT-SINAGMLYFFIAH 172 +++FI SM+ +++ DN + +E++ +SS+ L+ ++ + +A F Sbjct: 123 YFACLSLFIFSMLGIVMADNFLMMFIFWELVGISSYLLIGFWYERPSAADACKKAFLTNR 182 Query: 173 AGSVLIMIAFLLMGRESGS-LDFASFRTLSLS-----PGLASAVFLLAFFGFGAKAGMMP 226 G ++ LL+ G L+F + + G+A+A LL F G K+ P Sbjct: 183 LGDFGFLVGILLVWATLGHRLNFDALKQYLDKHTLEFAGVATAAGLLVFCGAAGKSAQFP 242 Query: 227 LHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAI 285 LH WLP A P+ SAL + MV G++ + ++ L L ++ IG I Sbjct: 243 LHVWLPDAM-EGPTPVSALIHAATMVAAGVYMLCRIYFLLDVSGSHALE---VIAWIGGI 298 Query: 286 SALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHL 345 +ALL + A+ + DIKR+LA+ST+ +G +++AVG G A+FHL Sbjct: 299 TALLAAVIAIQQNDIKRILAYSTLSQLGYMVMAVG--------------THGPTPAMFHL 344 Query: 346 LNHALFKGLLFLGAGAIISRL-HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGF 404 HA FK LLFLGAGA+I + H ++ KMGAL K+MP T IG LA++ PPL+GF Sbjct: 345 TTHAFFKALLFLGAGAVIHAVHHEQNIWKMGALRKKMPTTFVTFTIGTLALAGCPPLSGF 404 Query: 405 ISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHA 464 S+ A++ ++ + L ++ + F GAPRS A Sbjct: 405 YSKDGIL----------GQAMETHHYGLFILGLLAAILTTFYMFRLVFVAFYGAPRSEAA 454 Query: 465 EEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGT 524 + A E P + +++LA + + F VAS + + Sbjct: 455 DHAHEAPGMLKWPLIILAVFSFIGGV-----IGIEGVYGKFFEPEKVEHVASWVDGIMAP 509 Query: 525 FHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVM 584 + + +L + + W + + G Sbjct: 510 INDSPLAAAFGILAFLAGIAAAFAFYWNKMVDPLPEKLG--------------------- 548 Query: 585 QPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEI 644 L + F + + L A ++R T+ + + + Sbjct: 549 -FLSRLMRNKFYFDEFYEHVLIPCTQEALAKLANGIDRWIIGGFMVRGTQGTTEFIGRAL 607 Query: 645 QHLQSGDFRLYCLYVVAALVVLLIAI 670 + +Q+G + Y +VA + ++L I Sbjct: 608 RLVQTGSLQTYAFLLVAGVALVLYLI 633 >UniRef50_B1WQD4 NADH dehydrogenase subunit 5 n=9 Tax=Cyanobacteria RepID=B1WQD4_CYAA5 Length = 682 Score = 346 bits (888), Expect = 2e-93, Method: Composition-based stats. Identities = 162/732 (22%), Positives = 290/732 (39%), Gaps = 111/732 (15%) Query: 1 MDALQLLTWSLILYLF--ASLASLFLLGLDRLAIKLSG-----ITSLVGGV----IGIIS 49 M+ L W + + A + L L+ +++ +L I SL+G ++ Sbjct: 1 MEPLYQYAWLIPVLPLLGAMVVGLGLISFNQVTNRLRQANAVFIISLLGASMVLSFALLW 60 Query: 50 GITQLHAGVTLVARFAPPFEF-ADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEG 108 Q H T + +A F + +D LSA M ++++ + + +Y+ YM G Sbjct: 61 SQIQGHETYTRMIEWAAAGNFHLQMGYTLDHLSALMCVIVTTVAFLVMVYTDGYMAHDPG 120 Query: 109 KGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQD-KTSINAGMLY 167 +++IF ASM+ L++ N + +E++ + S+ L+ D K + +A Sbjct: 121 --YVRFYAYLSIFSASMLGLVISPNLVQVYIFWELVGMCSYLLIGFWFDRKAAADACQKA 178 Query: 168 FFIAHAGSVLIMIAFLLMGRESGSLDFASF--------RTLSLSPGLASAVFLLAFFGFG 219 F G +++ L + +G+ +F + ++P LA +L F G Sbjct: 179 FVTNRVGDFGLLLGMLGIYWATGTFEFDLMGERLESLVSSGMIAPALAGLFAVLVFLGPV 238 Query: 220 AKAGMMPLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGIL 278 AK+ PLH WLP A P+ SAL + MV G+F + ++ + Sbjct: 239 AKSAQFPLHVWLPDAM-EGPTPISALIHAATMVAAGVFLVARMYPVFEPIPTAM----TI 293 Query: 279 VMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGL 338 + GA+++ LG AL + DIK+ LA+ST+ +G +++A+G+ Sbjct: 294 IAWTGAVTSFLGATIALTQNDIKKGLAYSTISQLGYMVMAMGIG--------------AY 339 Query: 339 LGALFHLLNHALFKGLLFLGAGAIISRLHT---------HDMEKMGALAKRMPWTAAACL 389 LFHL+ HA FK +LFL +G++I + DM MG L K MP T+ A L Sbjct: 340 TAGLFHLMTHAYFKAMLFLCSGSVIHGMEGVVGHDPVLAQDMRLMGGLRKYMPLTSLAFL 399 Query: 390 IGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVK 449 +G LAI IPP GF S+ F A P ++ T GL + Sbjct: 400 VGTLAICGIPPFAGFWSKDEILGLAFE-----------ANPALWLVGWFTAGLTAFYMFR 448 Query: 450 MYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNT 509 MY +TF G R + E+ +A P M + +T Sbjct: 449 MYFMTFEGDFRGNDMDIRNELSMA-----------------AAPVFGPGAMDVKELDHDT 491 Query: 510 PPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGD--AWA 567 LL+L + ++ L W + + G+ A Sbjct: 492 EDHGHDDHGHSDSPHESPLTMTLPLLILAIPSTVIGLLGKPWDNTFESFIYAPGEVIEEA 551 Query: 568 CGYGWENAMAPSGNGV-MQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWD 626 + W +GN V + + + ++L L++++DP K A + + ++D Sbjct: 552 THFDWTEFGIMAGNSVGIALIGITIASLMYLQKKIDPKAIAKKYPA--LYQFSLNKWYFD 609 Query: 627 ERVIRPIVSATQRLAKEI--------------------------QHLQSGDFRLYCLYVV 660 + + + +RLA++I ++L++G + Y L + Sbjct: 610 DIYHKVFIMGCRRLARQIMEVDYRVIDGAVNLTGLATLVSGEGLKYLENGRAQFYALIIF 669 Query: 661 AALVVLLIAIAV 672 A++ +I +V Sbjct: 670 GAVLGFVIVFSV 681 >UniRef50_A0AL63 Complete genome n=20 Tax=Bacillales RepID=A0AL63_LISW6 Length = 802 Score = 346 bits (887), Expect = 2e-93, Method: Composition-based stats. Identities = 141/597 (23%), Positives = 265/597 (44%), Gaps = 23/597 (3%) Query: 1 MDALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTL 60 M L L ++ A L LF ++ + V I ++ I + T+ Sbjct: 1 MSFLHLAILLP--FIVALLIPLFYRWTKQVHTGWLVLPIPVILFIYFLTFIPKTMHEATI 58 Query: 61 VARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNI 120 V+ P + T+ +D LS L+I+ + + + YS+ Y+ + + + + F+ + Sbjct: 59 VSMPWIPRLGINFTVVVDGLSLLFALLITGIGSLVTFYSIYYLGKKKER-LSNFYTFLFM 117 Query: 121 FIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKT-SINAGMLYFFIAHAGSVLIM 179 F+ +M+ +++ DN + +E+ S+SS+ L+ + S I G ++++ Sbjct: 118 FMTAMLGVVLSDNLIVLYLFWELTSISSFLLIGYWYHRERSRYGARKSMMITVFGGLMML 177 Query: 180 IAFLLMGRESGSLDFASF---RTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHP 236 F+L+ S S + + L +L G K+ +P H WLP A Sbjct: 178 GGFILLHIMSDSFSIRAIIQNADIISHNSLFIPAMILVLLGAFTKSAQVPFHIWLPDAM- 236 Query: 237 AAPSHASA-LMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYAL 295 AP+ SA L S MVK GI+ + + L A +G+ W V +G + G L A Sbjct: 237 EAPTPVSAYLHSATMVKAGIYIVARFT-PLFASSGV---WFWTVSLVGITTLFWGSLNAT 292 Query: 296 AEQDIKRLLAWSTVENVGIIL--LAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKG 353 + D+K +LA+ST+ +G+I+ L VG A + + V+ ++ A+FHL NHA FKG Sbjct: 293 KKNDLKAILAYSTISQLGMIMALLGVGAASLHFDTLSDDIYVMAIVAAVFHLFNHATFKG 352 Query: 354 LLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQS 413 LF+ G + T D+ ++G L + MP TA IG A++ IPP NGF+S+ ++S Sbjct: 353 SLFMMVGIVDHETGTRDIRRLGGLMRIMPITATIAFIGTFAMAGIPPFNGFLSKEMFFES 412 Query: 414 LFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRS-THAEEAQEVPN 472 + +++ ++ G + V+ V + + ++ TF G + ++ E P Sbjct: 413 MINITHLQLFDASTWGILLPVVAWVASVFTFVYSMIIFFKTFTGKVKPFLLPKKPHEAPF 472 Query: 473 TMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPS 532 +++ ++L+ VLI L + +A I+ A +A+ ++ +H Sbjct: 473 GLLLPPIILSIFVVLIGLFPNLIAKPILEPA---VRAIVPGLATDFSIHISLWHGFTPAL 529 Query: 533 LLLLLLLAMPLLPGL----YWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQ 585 L+ ++A+ +L L + W +R R G + G + + + Sbjct: 530 LMTFGVVAVGILLFLTHKYWKPWITTRVPKALRIGKTYDNGMYYLEQGSYRMTMFIM 586 >UniRef50_B5YKJ0 NADH-quinone oxidoreductase chain l n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YKJ0_THEYD Length = 630 Score = 344 bits (882), Expect = 7e-93, Method: Composition-based stats. Identities = 143/690 (20%), Positives = 275/690 (39%), Gaps = 86/690 (12%) Query: 4 LQLLTWSLILYLFASLASLFLLG--LDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLV 61 ++ ++L+ A L+G + + +G+ S++G ++ + I Q+ +G T+ Sbjct: 1 MEKYYILILLFPLAGFLFNILIGRFISPKVVSWAGVLSILGSLVVALFAIAQVFSGKTIE 60 Query: 62 ARFAPPFEFAD----LTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFF 117 D +D L+A M+ V+ + + +YS+ YM + G + Sbjct: 61 YNIYTWILSDDLKVSFGYLIDQLTAVMLFVVCFVGWLIHIYSVGYM--HGDPGYPRYFAY 118 Query: 118 MNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKT-SINAGMLYFFIAHAGSV 176 +N+F+ SM+ L++ +N +E + L S+FL+ K + +AG F + G Sbjct: 119 LNLFVFSMLMLVMGNNLVMLYFGWEAVGLCSYFLIGFWYHKKTASDAGKKAFIVNRIGDF 178 Query: 177 LIMIAFLLMGRESGSLDFAS------------FRTLSLSPGLASAVFLLAFFGFGAKAGM 224 + L+ +L++ + L + + LL F G K+ Sbjct: 179 GFALGIFLLFINVYALNYTDIFPKIPGLQGHTLNIFGWNIDLITLIALLLFCGAVGKSAQ 238 Query: 225 MPLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIG 283 +PLH WLP A P+ SAL + MV G+F + ++ G+ +V G Sbjct: 239 IPLHVWLPDAM-EGPTPVSALIHAATMVTAGVFMVARLN----PIYGMSEIALAVVAITG 293 Query: 284 AISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALF 343 A+++ AL ++D+KR++A+ST+ +G + + G+A G +F Sbjct: 294 AVTSFFAATIALVQRDMKRIIAYSTISQIGYMFIGCGMAAYG--------------AGIF 339 Query: 344 HLLNHALFKGLLFLGAGAIISRL-HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLN 402 HL HA FK LLF+GAG+++ + D+ KMG L K+MP T LI L I+ IP + Sbjct: 340 HLYTHAFFKALLFMGAGSVMHAMAGELDIYKMGGLRKKMPITYITFLIASLTIAGIPGFS 399 Query: 403 GFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRST 462 GF S+ + F+ ++ + L G +T L ++ + F G R T Sbjct: 400 GFFSKDEILWAAFASAKPYGKFIWLLG-------TITAALTAFYTFRILFVAFHGKFRGT 452 Query: 463 HAE--EAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIAL 520 E E P M V +++LA V++ I H P V + Sbjct: 453 PEEFKHVHESPPIMTVPLIVLAIGSVIVGYF---------SIPHFLEPVIPKPVFAA--- 500 Query: 521 VPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSG 580 P V ++ + + + +Y + +A + Sbjct: 501 -PHEQERVVMTMSIIAGVTGILIAGYIYIVKSTV------------------SARLAKTF 541 Query: 581 NGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRL 640 +G + V + + + + + E ++ I + Sbjct: 542 SG----VYKVLWNKYYVDELYSFLFVKPTLWIAEKFIERFADIKIIEGIVNGIPKLIYKT 597 Query: 641 AKEIQHLQSGDFRLYCLYVVAALVVLLIAI 670 I+ +Q+G + Y ++++A +++ ++ I Sbjct: 598 GLLIRPIQTGQLQQYAIFMIAGIIIFVLII 627 >UniRef50_B5YKQ9 Hydrogenase 4, component B or formate hydrogen lyase, subunit 3, putative n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YKQ9_THEYD Length = 686 Score = 343 bits (881), Expect = 1e-92, Method: Composition-based stats. Identities = 146/674 (21%), Positives = 295/674 (43%), Gaps = 17/674 (2%) Query: 12 ILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAP--PFE 69 L L + + + + ++ I + + + + P Sbjct: 8 FLALISGMVLTSFIKNKNFSGFITLIMMIFSSFCIFYFSLDVIIENKFIEQEIFSLKPLL 67 Query: 70 FADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALL 129 + T+ +DSLSA +L+ISL+ SL+S Y+ Y+ F+ + + + ++ Sbjct: 68 NSSFTISIDSLSALFLLIISLVSFCVSLFSWKYLDVYKTNSPKRFYPFLILLFIASIGVV 127 Query: 130 VMDNAFWFIVLFEMMSLSSWFLVIARQDKT-SINAGMLYFFIAHAGSVLIMIAFLLMGRE 188 + + +FIV +E+M+LSSWFLVI ++K ++ G+ YF H + +++A +++ Sbjct: 128 SVKDFLFFIVFWELMTLSSWFLVIFEREKKSALKGGLQYFIATHVTTAFLILASVILYSY 187 Query: 189 SGSLDFASFRT-----LSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHAS 243 S F + P L+ + F F KAG++P WLP +P PS AS Sbjct: 188 SNDFSFKEINKSFSLIIKNQPYLSHFILFCIFIAFVTKAGVLPFGFWLPNTYPQPPSSAS 247 Query: 244 ALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRL 303 + GVM K+ ++ + + ++ + WG ++ + G S +G + AL + + KRL Sbjct: 248 SFFGGVMSKLAVYALFRFFCSVIPFSFHTQIWGFIIASFGVFSIFVGTIAALTQDEAKRL 307 Query: 304 LAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAII 363 +++ + VG + L +GV + + + +P L + L+G LFH+ N++++K LLFL AG+I Sbjct: 308 MSFHAIGQVGYMFLGIGVGLYFIRI-NPFLASIALVGGLFHVFNNSIYKSLLFLNAGSIF 366 Query: 364 SRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAV 423 + T D+ K+ L K MP TA LIG L+I+ +PP NGFIS+ ++S ++ V Sbjct: 367 YKTGTTDLNKVSGLMKVMPLTAITALIGSLSIAGVPPFNGFISKLLIFESSIWSAKQSEV 426 Query: 424 ALQLAGP--IAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLL 481 + G + ++ + + F+K F G + T +E + +P +M+++ ++L Sbjct: 427 FFLIRGAFIVFGIISVFISAVTLASFLKFVNSAFMGKLQGT-IDEKRNLPWSMVLSQIIL 485 Query: 482 AALCVLIALSA----SWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLL 537 A +C+L L + ++ + + V + + + + + Sbjct: 486 AFICLLAGLFPFIPLKIIYNAVIASSGSLPKFSSVFVGNMLGVGINFVENYSQGAWFPIF 545 Query: 538 LLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGW-ENAMAPSGNGVMQPLRVVFSALFR 596 ++ ++ + A +R + W G + G+ QP + + S Sbjct: 546 IMIPLIILTILIFSFERYAKAPKRDVETWYGGKEHAPEEVVYKGHSFYQPFKDLVSFKIG 605 Query: 597 LRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYC 656 Q + + DE + PIV + + + + + Y Sbjct: 606 KIQFKGFYPVGIPAIKFSVPESFLKILRVDEWLYYPIVDKLTKFFEFLAQIYNSITEKYI 665 Query: 657 LYVVAALVVLLIAI 670 ++++ + + I + Sbjct: 666 IWLIFGSIFIFILL 679 >UniRef50_C6HVM9 Putative formate hydrogenlyase subunit 3 (HyfB) n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HVM9_9BACT Length = 682 Score = 343 bits (879), Expect = 2e-92, Method: Composition-based stats. Identities = 198/665 (29%), Positives = 309/665 (46%), Gaps = 17/665 (2%) Query: 18 SLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAPPFEFADLTLRM 77 LA ++G + + +SG+ L LR+ Sbjct: 22 GLAGAGVVGRRPSLASFFFTLLSLESLAIALSGLLPLVTTSDTRLILPGGIPGLSFHLRL 81 Query: 78 DSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWF 137 D LS F +L++ LYS Y + + A +F+ + + + + F Sbjct: 82 DPLSGFFLLLLGGASAGVLLYSAGYTKNEAPEKKAQFLAKTTVFLFFTGGVFLAADVYSF 141 Query: 138 IVLFEMMSLSSWFLVIARQDKTSIN-AGMLYFFIAHAGSVLIMIAFLLMGR--------E 188 ++ +E+M+++S+FL+++ ++ + A L +AH GS+LI+ AF L+ Sbjct: 142 MLFWEIMAVASFFLILSGENTEGVRRASYLTLLLAHGGSMLIVTAFALLATRELPSGSLT 201 Query: 189 SGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSG 248 S F + + LS G A V LL GFGAKAG++PLH WLP AHPAAP+ ASAL+SG Sbjct: 202 MASFSFEALKMNHLSSGEALLVSLLFLLGFGAKAGVVPLHVWLPLAHPAAPAPASALLSG 261 Query: 249 VMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWST 308 VM+K I+G+++ DL+ L +GIL++ GA AL G+L+A+ + D K LLA+S+ Sbjct: 262 VMLKAAIYGLIRALFDLVGLPQLAPSFGILLLVTGAFMALFGILHAILQSDTKTLLAYSS 321 Query: 309 VENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHT 368 +EN+G+ILL G+ ++ L PL + L AL+H LNHA FK LLFLGAG +I Sbjct: 322 IENIGLILLGTGLGILYLKTGHPLAGTLALCAALYHALNHAFFKALLFLGAGTMIHATGE 381 Query: 369 HDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLA 428 ++ +MG L K+MP + A LI L+IS IPP NGF+SEW QS + + A Sbjct: 382 TNLNRMGGLFKKMPVSGALVLIAVLSISGIPPTNGFVSEWLLLQSTLQARDLLGTIQRSA 441 Query: 429 GPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLI 488 +L + LA M F+K +G+ + G PRS A A E + M LA + + Sbjct: 442 VLFGAAILVLASALAAMGFLKFFGVGYLGQPRSDGARAAHECSLFERLGMGGLAMGSLFL 501 Query: 489 ALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLY 548 L S + +I+ T+T + + PS L LL + ++ L Sbjct: 502 GLFPSLVLGEILKAVSPLTSTTLPSPSGAYGWAWLLPLPPAGPSTSPLFLLLLLVILTLP 561 Query: 549 WLWC-RSRRAAFRRTGDAWACGY-GWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLR 606 LW RR W CGY + QP+R F F +++ L Sbjct: 562 VLWLVLGTEGKKRRLSIPWGCGYRDSYRRSQATAESFAQPIRHFFPVFFSMKRHLPSPDD 621 Query: 607 LNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVL 666 + + RP+ +A+ + ++SG +Y +Y L++L Sbjct: 622 PDPVFLLSVEDPH------WPLLYRPLFRLFVAIAEGAERVRSGRISIYLIYSFTTLILL 675 Query: 667 LIAIA 671 L + Sbjct: 676 LSVLR 680 >UniRef50_C0YTV8 NADH dehydrogenase I chain L n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YTV8_9FLAO Length = 637 Score = 342 bits (877), Expect = 3e-92, Method: Composition-based stats. Identities = 146/608 (24%), Positives = 262/608 (43%), Gaps = 59/608 (9%) Query: 71 ADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLV 130 + ++D LS MV++I+ + + LYS+ YM KG ++N+FI SM+ L++ Sbjct: 75 INFGFQIDQLSLMMVMIITGIGSLIHLYSIGYMSH--DKGFYKFFTYLNLFIFSMLLLVM 132 Query: 131 MDNAFWFIVLFEMMSLSSWFLVIARQDKTSI-NAGMLYFFIAHAGSVLIMIAFLLMGRES 189 N + +E + L S+ L+ A F + G + ++I ++ ++ Sbjct: 133 GSNYLILFIGWEGVGLCSYLLIGFWYTNEEYGKAARKAFIMNRIGDLALLIGIFMIASQT 192 Query: 190 GSLDFASFRT----LSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASAL 245 ++D+ S L + + F G K+ +PL++WLP A A P+ SAL Sbjct: 193 NAVDYLSVAENASKFELDGTVIIFITASLFIGATGKSAQVPLYTWLPDAM-AGPTPVSAL 251 Query: 246 -MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLL 304 + MV GI+ +++ L +++ IG ++A L YAL + DIK++L Sbjct: 252 IHAATMVTAGIYLVVRSNFLF----TLAPTVQGVILFIGFLTAALAGFYALRQNDIKKVL 307 Query: 305 AWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIIS 364 A+STV +G + +A+G+ A+FH++ HA FK LLFLGAG++I Sbjct: 308 AYSTVSQLGFMFIALGLG--------------AYTTAMFHVMTHAFFKALLFLGAGSVIH 353 Query: 365 RL-HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAV 423 + + DM MG L K +P T A LIG LAIS P L+G IS+ + F+ + Sbjct: 354 AMSNEQDMRFMGGLKKYIPLTHATFLIGTLAISGFPLLSGMISKDEILVAAFAKN----- 408 Query: 424 ALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHA--EEAQEVPNTMIVAMLLL 481 P+ V+L V + ++Y +TF G R T E P+ M + +++L Sbjct: 409 ------PVYWVILFVLAAITATYMFRLYYLTFHGEFRGTEEQKHHLHESPSNMTLPLIVL 462 Query: 482 AALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAM 541 A L V+ H A P + + T + V + ++LL A Sbjct: 463 AVLSVIGGFINLPHFIGHGHYAKLMEWLKPVLTEQSYSQMEATL-SGVPFNTEMILLAAT 521 Query: 542 PLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQL 601 ++ W R+ ++ A GWE + + + + Sbjct: 522 VIMFFSVWFIVRNTYVKKKKMAVAEESYTGWE---------------RLSAKKLYVDELY 566 Query: 602 DPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVA 661 + + K + + + + +R + + + K ++ +Q+G+ Y L + Sbjct: 567 NAL--IVKTVEGLGRGGKMFDKGILDRFVNFVGDGAEDSGKAMKRVQNGNVETYILIMSL 624 Query: 662 ALVVLLIA 669 A+ ++LI Sbjct: 625 AVGIILIV 632 >UniRef50_B9DJY9 Putative NADH dehydrogenase I chain L n=1 Tax=Staphylococcus carnosus subsp. carnosus TM300 RepID=B9DJY9_STACT Length = 824 Score = 341 bits (875), Expect = 6e-92, Method: Composition-based stats. Identities = 132/562 (23%), Positives = 243/562 (43%), Gaps = 17/562 (3%) Query: 24 LLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAPPFEFADLTLRMDSLSAF 83 + R + ++ I ++ + + + +T V+ P D R+D LS Sbjct: 48 IKPFARFSGWIALIAPILSALYFVFKISQTADSKITSVSLPWMPIIDLDFAFRLDGLSMI 107 Query: 84 MVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEM 143 L+I+L+ LY+ Y+ + E F++ +F+ +M+ +++ DN V +E+ Sbjct: 108 FALLITLIGTGVVLYANAYLSK-EHDDLPRFYFYLILFMFAMLGVVLADNTILLYVFWEL 166 Query: 144 MSLSSWFLVIARQDKTSI-NAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASF---RT 199 S++S+ L+ ++ + N + F I G + ++I F+++ SG+ + Sbjct: 167 TSIASFLLISYWYNRKASQNGALKSFLITVFGGMFMLIGFIIIYSISGTNTISELVTQTD 226 Query: 200 LSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASA-LMSGVMVKIGIFGI 258 S + G K+ P H WLP A AP+ SA L S MVK G++ + Sbjct: 227 TLRSSPWFPFAVVCILIGAFTKSAQFPFHIWLPDAM-EAPTPVSAYLHSATMVKAGLYLL 285 Query: 259 LKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLA 318 + L W G +V+ +G I+ +G A+ ++D+K LLA+ST+ +G+I+ Sbjct: 286 FRFTPIL----SYASWVGYIVITVGIITLAVGSFVAVGQRDLKALLAYSTISQLGMIMSM 341 Query: 319 VGVAMVGLSLHDPL--LTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGA 376 VG M+ SLH V+ L LFHL+NHALFK +LF+GAG I T ++ +G Sbjct: 342 VGFGMLTYSLHKSFVEFFVISLFAGLFHLINHALFKSVLFMGAGIIDHETGTRNLADLGG 401 Query: 377 LAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVML 436 L K +P TA I +A++ +P NGF+S+ + +L + ++ + Q+ I +++ Sbjct: 402 LRKLLPVTATIMTISAMAMAGLPFFNGFLSKEMFFTTLVNGRKLP-IDDQIFMSIMLIIA 460 Query: 437 AVTGGLAVMCFVKMYGITFCGAPRSTHAEEA--QEVPNTMIVAMLLLAALCVLIALSASW 494 L + ++M TF G E P M +A +++ L + + Sbjct: 461 IGASVLTFVYSLRMIKDTFFGPLNKEKLPHVPGHE-PIGMYIAPVIIVCGLPLFFIIPNI 519 Query: 495 LAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRS 554 L ++ A N + T L++ + + LL W+ + Sbjct: 520 LGKYLISPALRDINHTVVVEKYIPHITAWHGFTSELGITLIIYTIGILLLWRSRWMKVYN 579 Query: 555 RRAAFRRTGDAWACGYGWENAM 576 R + + W Sbjct: 580 RIPSILSINSLYNAMLKWSEGF 601 >UniRef50_A1SQ81 NADH dehydrogenase (Quinone) n=2 Tax=Actinomycetales RepID=A1SQ81_NOCSJ Length = 664 Score = 339 bits (870), Expect = 2e-91, Method: Composition-based stats. Identities = 197/602 (32%), Positives = 298/602 (49%), Gaps = 14/602 (2%) Query: 63 RFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFI 122 + + L L F++LV + V +++++ Y + + + F+ Sbjct: 61 DLSTALPLTGVALDPTPLGGFVMLVAGAVGAVAAVFAIGY--AHGPAASRTSWAALPAFL 118 Query: 123 ASMVALLVMDNAFWFIVLFEMMSLSSWFLVI--ARQDKTSINAGMLYFFIAHAGSVLIMI 180 SM + +A F++++E+M+L+S LV+ R + +A + Y + H L+++ Sbjct: 119 VSMQLVPAAADAVSFLLMWELMALASAVLVLTEHRDREEVRSAALWYAAMTHLSFGLLLL 178 Query: 181 AFLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPS 240 F ++ E G F + + + AS F+L GF KAG +P H WLPRAHPAAPS Sbjct: 179 GFTVLVEEGGGTGFDAMSAVDPTSLQASIAFVLLIAGFATKAGAVPFHVWLPRAHPAAPS 238 Query: 241 HASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDI 300 H SA+MS MVK+G++G L VA+ LL G P WWG +V+A+GA+SA G+L A D+ Sbjct: 239 HVSAVMSAAMVKMGVYGALLVALRLLP--GGPTWWGFVVVALGAVSATYGILQASVTSDL 296 Query: 301 KRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAG 360 KRLLA+ST ENVG++ LA+G AM+ S L+ L L +HA FK LFLGAG Sbjct: 297 KRLLAYSTTENVGLMFLALGTAMLLRSHDVSAPADAALVACLLLLTSHAAFKTALFLGAG 356 Query: 361 AIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRV 420 A++ D+++MG LA RMP T A +G L +A+P GF++EW QSL +R Sbjct: 357 AVLHATGERDLDRMGGLAARMPVTNVAFALGALGAAALPLSVGFVAEWTLLQSLIHGARP 416 Query: 421 EAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLL 480 + + PI++ ++A+T GLA++ FVK YGI F PRS+ A EA+E M AML+ Sbjct: 417 DDRLVAAMMPISVAVVALTAGLALLTFVKAYGIAFLARPRSSGAAEAREATPGMRTAMLV 476 Query: 481 LAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLA 540 A V + L LA A P + VA + + G V S+L +LL A Sbjct: 477 AAVAVVGLGLVPGPLADLAGRAAGV--ADPGSEVAVDLPGIAGGVLDPVAVSVLAVLLAA 534 Query: 541 MPLLPGLYWLWCRSRRAAFRRTGDAWACGYGW-ENAMAPSGNGVMQPLRVVFSALFRLRQ 599 + L RR AW CG M + +PL VF R + Sbjct: 535 PVGVVALAAARR----RRRRRVDLAWGCGGARVSPRMQYTATSYAEPLARVFDDAVRPER 590 Query: 600 QLDPT-LRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLY 658 + T ++ L Q + + R+ +P++ R+ + LQ+G Y Y Sbjct: 591 DVVVTHYSESRYLVERVQFRQRLDEVVETRLYQPVLRVGDRVGAAARRLQNGSIHRYLGY 650 Query: 659 VV 660 Sbjct: 651 SF 652 >UniRef50_Q49W91 Na(+)/H(+) antiporter subunit A1 n=19 Tax=Bacillales RepID=MNHA1_STAS1 Length = 805 Score = 338 bits (868), Expect = 3e-91, Method: Composition-based stats. Identities = 142/579 (24%), Positives = 259/579 (44%), Gaps = 22/579 (3%) Query: 4 LQLLTWSLILYLFASLASLFLLGL-DRLAIKLSGITSLVGGVIGIISGITQLHAGVTLV- 61 + LL +++L L +L F+ R+ + + V I +S I+ +G T++ Sbjct: 1 MSLLHIAVLLPLIFALIIPFVYRFYKRIHLGWFVLPIPVVLFIYFLSYISTTMSGNTIME 60 Query: 62 -ARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNI 120 A + P F + L +D L L+I+ + + LYS++Y+ E G ++ + Sbjct: 61 KANWMPHFG-MNFNLYVDGLGLLFSLLITGIGCLIVLYSISYLSRQEQLGH--FYCYLLL 117 Query: 121 FIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDK-TSINAGMLYFFIAHAGSVLIM 179 F+ +M+ L++ DN + +E+ S SS+ L+ +DK SI + G + ++ Sbjct: 118 FMGAMLGLVLSDNLIILYLFWELTSFSSFLLISFWRDKQASIYGAQKSMLVTVFGGLSLL 177 Query: 180 IAFLLMGRESGSLDFASF---RTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHP 236 +L+ G+ + + +L G K+ P + WLP A Sbjct: 178 GGIILLSIAGGTTSIQELINNASEIQTSPFFIFSMILVLIGAMTKSAQFPFYVWLPDAM- 236 Query: 237 AAPSHASA-LMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYAL 295 AP+ SA L S MVK G++ + ++ G W V A+G I+ L A Sbjct: 237 EAPTPVSAYLHSATMVKAGLYLVARMTPIFAVSQG----WIWTVTAVGLITLFWASLNAT 292 Query: 296 AEQDIKRLLAWSTVENVGIILLAVGVAMVGLSL--HDPLLTVVGLLGALFHLLNHALFKG 353 +QD+K +LA+STV +G+I+ +GV V + + + A+FHL+NHA FKG Sbjct: 293 KQQDLKGILAFSTVSQLGMIMAMLGVGAVSFHFEGAESQIYIAAFTAAIFHLINHATFKG 352 Query: 354 LLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQS 413 LF+ GA+ T D++K+G L MP + LI L+++ IPP NGF+S+ +S Sbjct: 353 ALFMITGAVDHSTGTRDVKKLGGLLTIMPISFTITLITSLSMAGIPPFNGFLSKEKFLES 412 Query: 414 LFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTH-AEEAQEVPN 472 + ++ V +L G + + + + ++ G F G+ + ++A EV Sbjct: 413 MIEVTNVNLFSLDTLGILIPITAIIGSVFTFVYSIRFIGQIFLGSYKEDKLPKKAHEVSP 472 Query: 473 TMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPS 532 M+++ +LA L ++ L + L+ I+ A N T S T S Sbjct: 473 LMLISPSILAILVIVFGLFPAILSGSIIEPA---VNAIGQTTNSTAEFHMFHGFTPAFFS 529 Query: 533 LLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYG 571 L + ++ + L+ + ++ + T + W +G Sbjct: 530 TLGIYIVGIVLIITFSYWIYLLQKQPTKLTINYWYNKFG 568 >UniRef50_A9EX64 NADH dehydrogenase (Ubiquinone) n=3 Tax=cellular organisms RepID=A9EX64_SORC5 Length = 854 Score = 338 bits (867), Expect = 5e-91, Method: Composition-based stats. Identities = 141/676 (20%), Positives = 248/676 (36%), Gaps = 125/676 (18%) Query: 71 ADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLV 130 D+ +D LS M+LVI+ + + LYS YMRE G ++N+FI SM+ L++ Sbjct: 91 IDVAFSVDGLSGTMILVITGVGFLIHLYSSAYMREDPG--YYRFFAYLNLFIFSMLVLIM 148 Query: 131 MDNAFWFIVLFEMMSLSSWFLVIAR-QDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRES 189 DN V +E + + S+ L+ +D + +AG F + G +++A ++ + Sbjct: 149 GDNLAVLFVGWEGVGMCSYLLIGFWFKDDKNASAGKKAFVVNRIGDFGLLVAMAMLAYYT 208 Query: 190 GSLDFASFRTLSLSPGL--------------------------------ASAVFLLAFFG 217 G+L+F + + + L F G Sbjct: 209 GTLNFDGIAANAGNLLAAVKIWPIGNMSADTVPGFLSFLIPSQPVLVYAGTLAALALFLG 268 Query: 218 FGAKAGMMPLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWG 276 K+ +PL+ WLP A A P+ SAL + MV G++ + +++ + L + Sbjct: 269 CAGKSAQIPLYVWLPDAM-AGPTPVSALIHAATMVTAGVYLVARLSAVFV----LSPFAM 323 Query: 277 ILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVV 336 +V G +AL L + D+K++LA+STV +G + + VGV Sbjct: 324 AVVAVTGVATALFAASIGLFQNDLKKVLAYSTVSQLGFMFIGVGVG-------------- 369 Query: 337 GLLGALFHLLNHALFKGLLFLGAGAIISRLH--------THDMEKMGALAKRMPWTAAAC 388 FH+L HA FK LFLGAG++I +H + DM MG L MP T Sbjct: 370 AFAAGFFHVLTHAFFKACLFLGAGSVIHAMHARIHDTDQSQDMRNMGGLKNHMPLTRWTF 429 Query: 389 LIGCLAISAIPPLNGFISEWYTW--------QSLFSLSRVEAVALQLAGPIAMVMLAVTG 440 L+ CL+I+ P GF S+ +S+ + + + GP + + Sbjct: 430 LLACLSIAGFPGFAGFWSKDEILWRAFSSRIESVSTRGQPVWQWPEWLGPAIYWVGILAA 489 Query: 441 GLAVMCFVKMYGITFCGAPRST---------------------------HAEEAQEVPNT 473 + + Y TF G R E E P Sbjct: 490 TMTAFYMFRAYFQTFHGEFRGWTIVRGWKDPHPHGHHDDHHGHAHGEKLEGPEPHESPLP 549 Query: 474 MIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTP------PATVASGIALVPGTFHT 527 M + +++L AL V +A ++H+ H P P + A+ Sbjct: 550 MTIPLIVLGALSVFAGF---LMAEPLVHLTHNHAFAPLAHLLEPVFSLTERAVKAREGVE 606 Query: 528 QVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPL 587 + ++L + A L L ++R R Sbjct: 607 GLLFPMMLPGVAACFTGIFLAMLVYWNKRGEPERR----------------FAESFPGLY 650 Query: 588 RVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHL 647 R+++ +R+ + + T+ + D + + + ++ L Sbjct: 651 RLIYDK-WRIDELYNATVVGMVDAIADIFTMAD-KWIIDGIIAKLSAALVGFFGTVLRAL 708 Query: 648 QSGDFRLYCLYVVAAL 663 Q+G ++Y +V L Sbjct: 709 QTGRVQVYAASMVIGL 724 >UniRef50_B6YTW6 Hydrogenase 4, component B or formate hydrogen lyase, subunit 3 n=1 Tax=Thermococcus onnurineus NA1 RepID=B6YTW6_THEON Length = 690 Score = 338 bits (866), Expect = 6e-91, Method: Composition-based stats. Identities = 172/606 (28%), Positives = 284/606 (46%), Gaps = 26/606 (4%) Query: 3 ALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVA 62 L T ++ILY + A+L L + +I + I + + + + + ++ A Sbjct: 1 MEGLFTLAVILYFLSIPAALALKRSFKASISIGHILTALASIALLAFTFVSIPDILSGKA 60 Query: 63 -RFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGF-FMNI 120 F A + ++D LS M + L + S+YS YM YE G M ++ Sbjct: 61 IEFTYDLGVAQIPFQIDGLSLIMCFIFGALGLAASIYSPRYMAIYEKSGRGWMYITIYSV 120 Query: 121 FIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSIN-AGMLYFF-IAHAGSVLI 178 F+ SM+ ++ + N FWFI L+E+M+ +S+ L I DK + AG YF + ++ + Sbjct: 121 FMLSMILIVTIANMFWFIFLWEVMTFTSYLLTIWESDKEDVRKAGWKYFVTMHIVSTLPL 180 Query: 179 MIAFLLMGRESGS---LDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAH 235 +IA L+ + S L+F S L LSP + L GFG+K+G++PLH W P A+ Sbjct: 181 IIALALLYADVSSIEGLNFESLAALKLSP----VFYALFLIGFGSKSGVVPLHFWAPEAY 236 Query: 236 PAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYAL 295 APS+ SALM+G + K+ ++ +++ ++ +G V +G ++ +G LYAL Sbjct: 237 TVAPSNVSALMAGALEKVAVYALIRTTCFIMKPNET---FGYAVALLGTVTLTVGTLYAL 293 Query: 296 AEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHD--PLLTVVGLLGALFHLLNHALFKG 353 + D KRLLA+ ++ +G I L +GV +V ++ D + L +L+HL+NH FKG Sbjct: 294 KQTDAKRLLAYHSIGQIGYIWLGMGVGIVFIARGDMYSAFGAIALASSLYHLVNHTFFKG 353 Query: 354 LLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQS 413 LLFL G+I R + D+ ++ LAK MP+TA I ++I+ PP NGF+S+W +QS Sbjct: 354 LLFLSTGSIFYRTRSRDLNQLRGLAKLMPFTALFTFIAAMSIAGTPPFNGFMSKWMIYQS 413 Query: 414 LFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNT 473 F V VM + F+K Y F G P + ++A+EVP+ Sbjct: 414 TFLSGNGLIV-------FFGVMALFISAATLASFIKFYTTAFGGEP-TEFTKDAEEVPSP 465 Query: 474 MIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTP-PATVASGIALVPGTFHTQVTPS 532 M++A LA+LC+L+ L S + P ++ A + + LV T + Sbjct: 466 MLIAKGFLASLCILLGLVPSLILPILLSPGAALAGIDVSGLMDTNYWLVTIKAPLMPTGA 525 Query: 533 LLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYG-WENAMAPSGNGVMQPLRVVF 591 L L G+ +L ++T W G +P Sbjct: 526 ESYFKPLLFATLFGVIFLGMYLLFPISKKTYRPWTLGEPVAMEHYKFKAINYYEPFEEYI 585 Query: 592 SALFRL 597 L+ Sbjct: 586 HPLYHT 591 >UniRef50_B0BZT2 Proton-translocating NAD(P)H-quinone oxidoreductase, chain L n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0BZT2_ACAM1 Length = 671 Score = 337 bits (865), Expect = 7e-91, Method: Composition-based stats. Identities = 146/672 (21%), Positives = 265/672 (39%), Gaps = 57/672 (8%) Query: 7 LTWSLILYLFASLASLFLLG--LDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARF 64 + + L+ + A G L + +S +TS+ I + + G Sbjct: 4 FAYLIPLFPLIAFAVNLFFGHRLGSFSGWISVLTSVASSAIALPAAWVVAQGGQYSHEWL 63 Query: 65 APPFEFADLTLR--MDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFI 122 DL +D LSA ++ V++++ + +YS+ YM + K ++++F+ Sbjct: 64 WLTLGNYDLNFGYLLDPLSATLLFVVTVIGTLIQVYSIGYM--HGEKYYHRFFAYVSLFM 121 Query: 123 ASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDK-TSINAGMLYFFIAHAGSVLIMIA 181 A+M+ L++ +N + + +E+M L S+ L+ K ++ NA F G V + + Sbjct: 122 AAMLTLVIANNYVQYFMAWEVMGLCSYLLIGFYFHKDSAANASRKAFLTTRVGDVGLFLG 181 Query: 182 FLLMGRESGSLDFASF-RTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPS 240 + + G+L F + L L F G K+ PLH WLP A P+ Sbjct: 182 IMTLFVTGGTLSFVDLPNAVETGAPLLWLAAPLIFCGTVGKSAQFPLHVWLPDAM-EGPT 240 Query: 241 HASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQD 299 SAL + MV G++ + + + + + W VM IG ++A + AL D Sbjct: 241 PVSALIHAATMVAAGVYLVARSFVLFTSFPMVMPW----VMGIGTLTAFMAAYIALTATD 296 Query: 300 IKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGA 359 IK++LA+ST+ +G ++ A+G+ G+ FHL+ HA FK LLFLGA Sbjct: 297 IKKVLAFSTISQLGYMVTAMGLG--------------GMTAGTFHLMTHAFFKALLFLGA 342 Query: 360 GAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSR 419 G++I H D+ ++G L +M T A +I LAI+ +PPL+GF S+ + Sbjct: 343 GSVIHGAHEQDIRQLGGLFSKMKHTGATFVIASLAIAGVPPLSGFWSKDEILLEAYQEGH 402 Query: 420 VEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAML 479 + +L +T + ++ +TF G R+ A E P M V + Sbjct: 403 F----------VVYGVLLLTAFMTAFYMFRLVFMTFFGKARNPEI-HAHESPALMTVPLW 451 Query: 480 LLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLL 539 LA + + + S T A+ +V G+ + L +L Sbjct: 452 CLAIGAIFVGIPGSPFMDNWFQT----FLTGEHHAAAIDWMVMGSSIAAGVLGIGLAAVL 507 Query: 540 AMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQ 599 + + R W ++ P + LF + Sbjct: 508 YLAKPQWPVAIANTFRPLYLLSVNQFWI--------DDIYSVLILNPFQAFGEFLFGFDR 559 Query: 600 QLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQR----LAKEIQHLQSGDFRLY 655 + L A + + + D ++ +V+ T R ++ Q+G + Y Sbjct: 560 LVIDG--LVNSSATAMQKMSKIQLWIDRNIVDGLVNLTGRGTVIGGDILKLFQTGSTQFY 617 Query: 656 CLYVVAALVVLL 667 L +++ L Sbjct: 618 LLITCVSVLAFL 629 >UniRef50_D1RUK6 NADH dehydrogenase (Quinone) n=1 Tax=Serratia odorifera 4Rx13 RepID=D1RUK6_SEROD Length = 624 Score = 337 bits (864), Expect = 1e-90, Method: Composition-based stats. Identities = 232/570 (40%), Positives = 335/570 (58%), Gaps = 15/570 (2%) Query: 37 ITSLVGGVIGIISGITQLHAGVTLVARFAPP--FEFADLTLRMDSLSAFMVLVISLLVVV 94 + V G+ ++ + A + + P + + + L+A ++LVI+L + Sbjct: 36 FCAGVCGIGTLLVSLAATAAALPWLFTTPHPARLPWLHYAVEISGLNALLLLVIALSNLF 95 Query: 95 CSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIA 154 LY ++ G M + A++ A ++ DNA ++L E+ +L +FL++ Sbjct: 96 VGLYLCHWLTTLNDHNRTRQGSLMLLMPAALSAAVMADNALALVLLLELAALCGYFLIVR 155 Query: 155 RQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRTLSLSPGLASAVFLLA 214 RQD S AG F + G++L++ AF L+ ++ SL F++ R ++L L S FLLA Sbjct: 156 RQDAKSQQAGHSQFLLMRFGTLLLVAAFALIYSQTHSLQFSTMREIALPSALRSGAFLLA 215 Query: 215 FFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLW 274 GFG AG+MPLH W+P+AH +AP+ A++L S ++K+G+ G++K+ MDLL PLW Sbjct: 216 LAGFGIYAGVMPLHGWVPQAHSSAPAPAASLFSCALMKVGLLGVIKIGMDLLGTP--PLW 273 Query: 275 WGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLT 334 WG+LV+ + A +A G LYAL E D++RLLA+ T+EN+GIILL +G AMVGL+L P LT Sbjct: 274 WGLLVLLLAAGTAFFGGLYALMEHDLRRLLAYHTLENIGIILLGIGGAMVGLALQLPELT 333 Query: 335 VVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLA 394 + L+G LFHL NH+LFK L L +GA+ + DMEKMG LA+ MPWT A L+G ++ Sbjct: 334 ALALMGGLFHLCNHSLFKSALLLASGAVEQQTGLKDMEKMGGLARLMPWTCIALLVGLVS 393 Query: 395 ISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGIT 454 ++A+PPLNGF SEW +Q LF S A +L GP+ V LA+TG LAVMC K++G+ Sbjct: 394 MAALPPLNGFASEWLIYQGLFQFSAASAFVGRLLGPLLAVALAITGALAVMCVSKVFGVV 453 Query: 455 FCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATV 514 GAPR A A+ M+++ LL A LC+L + A WL P +A T Sbjct: 454 CLGAPRCEAAANARPATWPMMLSHLLPALLCLLCGIGAPWLIPLFARLAATLTPQA---- 509 Query: 515 ASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWEN 574 P H V+P L+ +LLLAMPLLP L R +R A R G+AWACGYG E Sbjct: 510 -------PLGAHLLVSPPLIAILLLAMPLLPLLIAAVYRGKRQARRTGGEAWACGYGHEA 562 Query: 575 AMAPSGNGVMQPLRVVFSALFRLRQQLDPT 604 +M + G QPLRV+F+ L+ LRQ L P Sbjct: 563 SMVITATGFAQPLRVMFAPLYALRQTLQPA 592 >UniRef50_Q9RGZ5 Na(+)/H(+) antiporter subunit A n=9 Tax=Firmicutes RepID=MRPA_BACPF Length = 805 Score = 336 bits (862), Expect = 1e-90, Method: Composition-based stats. Identities = 133/592 (22%), Positives = 243/592 (41%), Gaps = 17/592 (2%) Query: 1 MDALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTL 60 M L T S L + + ++ IT V Sbjct: 1 MTVLHWATISPFLLAILIPFLYKYARRIHTGWFVLVLPLVLFIYFIQYLSITSTGGVVEH 60 Query: 61 VARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNI 120 + P + T+ +D LS L+I+ + + LYS+ Y+ + + + ++ + Sbjct: 61 TIPWVPSLGI-NFTVFVDGLSLLFALLITGIGTLVILYSIFYLSK-KTESLNNFYVYLLM 118 Query: 121 FIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIAR-QDKTSINAGMLYFFIAHAGSVLIM 179 F+ +M+ +++ DN V +E+ SL+S L+ + S I G ++ Sbjct: 119 FMGAMLGVVLSDNLIVLYVFWELTSLASSLLISYWFHREKSTYGAQKSMLITVFGGFAML 178 Query: 180 IAFLLMGRESGSLDFASFRT---LSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHP 236 F L+ +G+ L S L +L G K+ P H WLP A Sbjct: 179 GGFSLLYVMTGTFSIRGIIENVDLVTSSELFLPAMILVLLGAFTKSAQFPFHIWLPDAM- 237 Query: 237 AAPSHASA-LMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYAL 295 AP+ SA L S MVK GI+ + ++ W L+ G ++ L G A+ Sbjct: 238 EAPTPVSAYLHSATMVKAGIYLVARLTPVFAGSAE----WFWLLTGFGVVTLLWGSTSAV 293 Query: 296 AEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLH---DPLLTVVGLLGALFHLLNHALFK 352 ++D+K +LA+STV +G+I+ +G+ + DP ++ A+FHL+NHA FK Sbjct: 294 RQKDLKGILAFSTVSQLGLIMTLLGLGSAAIYFGESVDPAFYSFAIMAAIFHLINHATFK 353 Query: 353 GLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQ 412 G LF+ AG I T D+ K+G L MP T LIG +++ +PP NGF+S+ + Sbjct: 354 GSLFMTAGIIDHETGTRDIRKLGGLMAIMPVTFTVSLIGLASMAGLPPFNGFLSKEMFFT 413 Query: 413 SLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAE-EAQEVP 471 +L + + A ++ G I +V+ + + + M+ TF G + + + + E P Sbjct: 414 ALLRATEMNAFNMETFGIIIVVLAWIASVFTFLYCLIMFFKTFTGKFKPENYDVKVHEAP 473 Query: 472 NTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTP 531 M+++ ++L +L ++ + LA I+ A P + V Sbjct: 474 IGMLISPVILGSLVIVFGFFPNILAYTIIEPAMQAV-LPTVLADGELFHVNIYMWHGFNA 532 Query: 532 SLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGV 583 L + + + + + ++ A + + D Y + +G+ Sbjct: 533 ELFMTMGVVAAGIILFLMMKNWAKAAFYMKERDPLNWFYDSSLSGVITGSQF 584 >UniRef50_C5QQQ5 CPA3 family monovalent cation:proton (H+) antiporter-3 subunit A n=2 Tax=Staphylococcus RepID=C5QQQ5_STAEP Length = 816 Score = 335 bits (860), Expect = 3e-90, Method: Composition-based stats. Identities = 140/622 (22%), Positives = 266/622 (42%), Gaps = 34/622 (5%) Query: 15 LFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLV--ARFAPPFEFAD 72 +FA + + + R+ + + + I IS I+ +G T++ + P F + Sbjct: 28 IFALIIPILYRFVKRIHLGWFVLPVPIVLFIYFISLISITMSGNTVMKTLNWMPHFG-MN 86 Query: 73 LTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMD 132 L +D L L+I+ + + LYS+ Y+ + E G ++ +F+ +M+ +++ D Sbjct: 87 FNLYVDGLGLLFSLLITGIGSLVVLYSIGYLSKSEQLGN--FYCYLLLFMGAMLGVVLSD 144 Query: 133 NAFWFIVLFEMMSLSSWFLVIARQDKTS-INAGMLYFFIAHAGSVLIMIAFLLMGRESGS 191 N + +E+ S SS+ L+ ++K + I + G + ++ +L+ + + Sbjct: 145 NLIILYLFWELTSFSSFLLISFWREKKASIYGAQKSLILTVLGGLSLLGGIILLSLAADT 204 Query: 192 LDFASFRTLS---LSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASA-LMS 247 + + + +L G K+ +P + WLP A AP+ SA L S Sbjct: 205 FSIQTMIEKASEIQNSPYFILAMILVMIGAFTKSAQVPFYIWLPDAM-EAPTPVSAYLHS 263 Query: 248 GVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWS 307 MVK G++ + ++ G W + +G I+ L A +QD+K +LA+S Sbjct: 264 ATMVKAGLYLVARMTPIFAISEG----WVWTITLVGLITLFWASLNATKQQDLKGILAFS 319 Query: 308 TVENVGIIL--LAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISR 365 TV +G+I+ L +G D L V G + A+FHL+NHA FKG LF+ G + Sbjct: 320 TVSQLGMIMSMLGIGAVSYHYQGADSQLYVAGFVAAIFHLINHATFKGALFMITGGVDHA 379 Query: 366 LHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVAL 425 T +++K+G L MP + +I L+++ +PP NGF+S+ +++ ++ + ++L Sbjct: 380 TGTRNVKKLGGLLTIMPISFTMTIITALSMAGVPPFNGFLSKEKFLEAMIDVTHADLMSL 439 Query: 426 QLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTH-AEEAQEVPNTMIVAMLLLAAL 484 G I ++ V + +K F G + + A E M+++ ++L L Sbjct: 440 NTLGIIFPIIAIVGSIFTFVYSIKFIMHIFFGKYKPDSLPKSAHESSMLMLLSPIILTIL 499 Query: 485 CVLIALSASWLAPKIMHIA--------------HAFTNTPPATVASGIALVPGTFHTQVT 530 V+ L S L I+ A H F PA +++ + V G Sbjct: 500 VVVFGLFPSILTQSIIEPATQAVSQTTGITAEFHLFHGITPAFISTLVIYVVGILLILTF 559 Query: 531 PSLLLLLLLAMPLLPGLYWLWCRSRRAA--FRRTGDAWACGYGWENAMAPSGNGVMQPLR 588 + LL L YW R +++ G+ N + G ++ Sbjct: 560 SYWVRLLEAQPNQLKFNYWYDTTGRVVPGYSENITNSYVTGFTRNNLVIIFGILILLTFV 619 Query: 589 VVFSALFRLRQQLDPTLRLNKG 610 + S F + + LR+ +G Sbjct: 620 TLLSVPFHITFKDVSQLRIFEG 641 >UniRef50_B6YWP6 Hydrogenase 4, subunit 3 n=3 Tax=Thermococcus RepID=B6YWP6_THEON Length = 634 Score = 335 bits (860), Expect = 3e-90, Method: Composition-based stats. Identities = 168/615 (27%), Positives = 281/615 (45%), Gaps = 35/615 (5%) Query: 3 ALQLLTWSLILYLFASLASLFLLG--LDRLAIKLSGITSLVGGVIGIISGITQLHAGVTL 60 + + +I+ AS +F L +L LS + SL GI+ + +TL Sbjct: 1 MEVIFLFIVIILSVASFIGVFSRSAILTKLVNALSALGSLTIAYAGIVGLKESVELNITL 60 Query: 61 VARFAPPF--EFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFM 118 + + F+ LTL++D LS F ++++ +L S+Y + Y+ Y+G F Sbjct: 61 LHLKSDSIINAFSTLTLKVDPLSGFFMIILGILGFCTSVYGIAYLDMYKGD-KRLYAFNY 119 Query: 119 NIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLI 178 +F+ M +LV N WF+V +E+M+L S FLV +++ ++ A + YF + A + + Sbjct: 120 PLFLLFMFLVLVSWNLLWFVVFWELMTLFSQFLVAFERNEKTLIATLKYFCMTKAAADFM 179 Query: 179 MIAFLL-MGRESGSLDFASFRTLSLS-----PGLASAVFLLAFFGFGAKAGMMPLHSWLP 232 +IA +L + SG D+ + ++ P V G G KA ++P H WLP Sbjct: 180 LIAIVLVLITISGGGDYDILSSQLVNYFRSHPLEMYLVSAGFMIGLGVKAALVPFHVWLP 239 Query: 233 RAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVL 292 A+ APS+ S+L+SG M K+ ++ + + + L G+L+ G ++ G + Sbjct: 240 DAYVEAPSNVSSLLSGAMEKMPVYMMFRFFLSFTP---LTPNIGLLIALFGTLTLFFGTM 296 Query: 293 YALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFK 352 YAL + D KRLLA+ +V +G ++ A+G + LS + L+ +LFH LNHA FK Sbjct: 297 YALKQTDSKRLLAYHSVGQIGYVVFALGAGIYLLSKGYTTFGALALMASLFHALNHAFFK 356 Query: 353 GLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQ 412 GLLFL AG+I+ R + D++ +G LA+ MP TA A LIG L+I+ +PP NGF+S+W + Sbjct: 357 GLLFLTAGSILYRTGSRDLDHLGGLARFMPITAFAALIGSLSIAGMPPFNGFVSKWMIYV 416 Query: 413 SLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPN 472 S + + + + FVK + F P +EVP Sbjct: 417 STLPTPTL--------VSLFGALALFISAVTTASFVKYFTSIFVRPPAKE--ITVKEVPV 466 Query: 473 TMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFT-NTPPATVASGIALVPGTFHTQVTP 531 +M + L+LA LCV+ + + I + TP TV G+ + G + Sbjct: 467 SMWASQLILAVLCVIFGVYPALPLEAISKAVDSVGVTTPSITVFPGLIVSDGIGNIAPLA 526 Query: 532 SLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVF 591 L+ L LL ++ + W G AM + F Sbjct: 527 LLVFSGALTAVLLAIF----------PYKISLPVWTTGTRRSLAMRLPASSYYASFEEEF 576 Query: 592 SALFRLRQQLDPTLR 606 ++ + T + Sbjct: 577 EDVYSWGEWCVCTTK 591 >UniRef50_Q04YB3 NADH dehydrogenase (Ubiquinone), L chain n=7 Tax=Bacteria RepID=Q04YB3_LEPBL Length = 648 Score = 335 bits (859), Expect = 3e-90, Method: Composition-based stats. Identities = 154/679 (22%), Positives = 282/679 (41%), Gaps = 65/679 (9%) Query: 6 LLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFA 65 L+ LI +L + L +L G + S ++ + +VA Sbjct: 10 LVALPLIGFLISGLFGKWLKGFTGIFSTGVVFLSFGLALVSFVLFHPMERTIPEIVAVL- 68 Query: 66 PPFEFADL----TLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIF 121 P E + ++D LS +M L+I+ + + LYS+ YM++ G A ++N+F Sbjct: 69 PWIETGGIQVSLAYQVDQLSLYMTLIITGIGSLIHLYSIGYMKDDPG--FARYFAYLNLF 126 Query: 122 IASMVALLVMDNAFWFIVLFEMMSLSSWFLVIA-RQDKTSINAGMLYFFIAHAGSVLIMI 180 I +M+ L++ +N + +E + L S+ L+ +++ NAGM F + G + +++ Sbjct: 127 IFAMLNLVLAENLILLFLGWEGVGLCSYLLIGFDYHKESAANAGMKAFIVNRIGDLGMLL 186 Query: 181 AFLLMGRESGSLDFASFRTLSLSPG----LASAVFLLAFFGFGAKAGMMPLHSWLPRAHP 236 L+ +GS+ F + L + + F G K+ +PLH WLP A Sbjct: 187 GIALVFWYTGSVSFTTIEGAILEIPSFRYILPVTAVCFFIGAIGKSAQLPLHVWLPDAM- 245 Query: 237 AAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYAL 295 A P+ SAL + MV G+F I ++ L+ + W ++ IG+++A L Sbjct: 246 AGPTPVSALIHAATMVTAGVFLIARLNPIFLSAPQVGHW----IVVIGSMTAFFAATIGL 301 Query: 296 AEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLL 355 + DIK++LA+STV +G + +A+G + LFHL+ HA FK LL Sbjct: 302 FQNDIKKVLAYSTVSQLGYMFVAMGAG--------------AYVAGLFHLMTHAFFKALL 347 Query: 356 FLGAGAIISRL-HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSL 414 FLG+G++I L H D+ MG L KRM T L+G LAIS IPP +GF S+ + Sbjct: 348 FLGSGSVIYALHHEQDLRNMGGLKKRMKITWITFLVGSLAISGIPPFSGFFSKDLILEKS 407 Query: 415 FSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPR--STHAEEAQEVPN 472 ++ G + + +T L +M + F G R S A E P Sbjct: 408 YT-----------YGALFYGLGIITALLTAFYMFRMTYLAFYGESRVSSDKALHLHESPL 456 Query: 473 TMIVAMLLLAALCVLIALS--ASWLAPKIMHIAHAFTNTP--PATVASGIALVPGTFHTQ 528 M + +++L+ + +L + + + F+ ++ I P Sbjct: 457 VMTIPLVILSIGATVTGFLEVPHFLFGGVHILTNYFSPVFIRGIEISEQIIKQPLDVREV 516 Query: 529 VTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLR 588 T + + L+A+ + + ++ P G ++ Sbjct: 517 GTTNAIEFSLVAVSIAVAISGIFIARTLF--------------LTGKNVPDDEGSHTGVK 562 Query: 589 VVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQ 648 + S + + + ++ L A E + + ++R ++ ++ +Q Sbjct: 563 RILSRKYYIDEFYR-NFIVDPILLLGKFLAGYVERNFLDLILRGTGRFAVAISLVLRRVQ 621 Query: 649 SGDFRLYCLYVVAALVVLL 667 +G Y + +V VV+L Sbjct: 622 TGIVVDYAILIVLGTVVIL 640 >UniRef50_A1ALQ0 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ALQ0_PELPD Length = 639 Score = 335 bits (859), Expect = 4e-90, Method: Composition-based stats. Identities = 159/643 (24%), Positives = 264/643 (41%), Gaps = 56/643 (8%) Query: 34 LSGITSLVGGVIGIISGITQLHAGVTLVARFAPPFEFADLTLRMDSLSAFMVLVISLLVV 93 L ++ LV V+ T TL A D+ +D SA M LV++ + Sbjct: 37 LPALSFLVTLVLYSSLVATGQPIAETLYTWVALDPLNVDVAFYLDQASAVMCLVVTGVGT 96 Query: 94 VCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVI 153 + LYS+ YM E + ++N+F+ M+ L++ N +E + L+S+ L+ Sbjct: 97 LIHLYSVGYMSHDEDQ--PRYFAYLNLFLFFMLMLVLGKNMIMLFAGWEGVGLASYLLIG 154 Query: 154 AR-QDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDF----ASFRTLSLSPGLAS 208 QD AGM F + G ++A LL+ S +LDF A F T L + Sbjct: 155 FWYQDDEKSAAGMKAFIVNRVGDTGFVLAALLIFSYSHTLDFQGINAYFGTAGLPVSTMN 214 Query: 209 AVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLA 267 + +L G K+ +PLH WLP A A P+ SAL + MV G++ + ++ LL Sbjct: 215 LIGILLLIGACGKSAQIPLHVWLPDAM-AGPTPVSALIHAATMVTAGVYLLSRMNGVLLQ 273 Query: 268 QTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLS 327 G +VM GA++A +G L + ++K++LA+ST+ +G + +A G+ Sbjct: 274 APGAMQ----VVMWGGALTAFVGATMGLTQYNLKKVLAYSTMSQIGYMFMACGLG----- 324 Query: 328 LHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLH-THDMEKMGALAKRMPWTAA 386 A+FHL +HA FK LFLGAGA++ LH DM KMG LAK+MP T Sbjct: 325 ---------SFSAAMFHLYSHAFFKACLFLGAGAVLHALHGEEDMRKMGGLAKKMPLTFV 375 Query: 387 ACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMC 446 L G LA+ +PP GF S+ S F+ + + AL L G AV G+ Sbjct: 376 TFLAGSLALCGVPPFAGFFSKDEILWSAFASAHGGSTALWLVG-------AVAAGMTSFY 428 Query: 447 FVKMYGITFCGAP--RSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAH 504 + +TF G + E P +M + +++L V P+++ Sbjct: 429 MFRAIIMTFFGQDNVPAKLKHGIHEPPFSMAIVLIILGVSSVAAGFIG---LPQVLADKF 485 Query: 505 AFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGD 564 F + + + L+ + + L G++ W Sbjct: 486 GFGSPFFSFLEPVFGHHALKAGVTHQTELMFMGISIAIALGGIFLAWVF----------- 534 Query: 565 AWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPF 624 YG A+ + + S + + + + + E Sbjct: 535 -----YGLNPALPEAIKKKAGCIYTTISQGYYFDAIYEKVIVKSLDTLSDSVLYNIAEKL 589 Query: 625 WDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLL 667 + I + + A + +QSG+ + Y LY +A L +++ Sbjct: 590 LNYVTIVKAGATARYSANLLSRMQSGNVQAYVLYALAGLALII 632 >UniRef50_UPI00003837CC COG1009: NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI00003837CC Length = 758 Score = 334 bits (858), Expect = 5e-90, Method: Composition-based stats. Identities = 134/587 (22%), Positives = 236/587 (40%), Gaps = 42/587 (7%) Query: 1 MDALQLLTWSLILYLFASLASLFLLGLDR-LAIKLSGITSLVG-GVIGIISGITQLHAGV 58 M + LL + IL S+ + L R +A L+G+ +L G I ++ + V Sbjct: 1 MSSNTLLAAAAILPFLGSVLAGALPSRARNVAAALAGLVTLTSLGCILALTPQLAGGSSV 60 Query: 59 TLVARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFM 118 + P LR+D L+ +++ + + LY+ YM + + Sbjct: 61 VHAIDWLPSLG-VRFVLRLDGLAWLFSVLVLAIGALVVLYARYYMS--PADPVPRLFAYF 117 Query: 119 NIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSIN-AGMLYFFIAHAGSVL 177 F+ +M+ +++ N ++ +E+ S+ S+ L+ D + + I AG + Sbjct: 118 LAFVGAMLGIILSGNLIQLVLFWELTSIVSFLLIGYWYDNAAARDGARMSLTITAAGGLC 177 Query: 178 IMIAFLLMGRESGSLDFASFRTLS---LSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRA 234 +++ +L+GR GS D + + L +L G K+ P H WLPRA Sbjct: 178 LLVGTILIGRIVGSYDLETVLASGDTIRNSSLYLPALVLVLAGALTKSAQFPFHIWLPRA 237 Query: 235 HPAAPSHASA-LMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLY 293 AAP+ SA L S MVK GIF ++++ L W +V IG + L+G Sbjct: 238 M-AAPTPISAYLHSATMVKAGIFLMIRLWPVLAGTDA----WYWIVGTIGMATMLIGSWS 292 Query: 294 ALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKG 353 A+ + D+K LLA+ST+ + + ++L L + + ++ A+FH +NHA FK Sbjct: 293 AIFQHDLKGLLAYSTISH-----------LGLITLLLGLDSPLAVVAAIFHTVNHATFKA 341 Query: 354 LLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQS 413 LF+ G I T DM ++ L + MP+TA ++ A++ +P LNGF+S+ Sbjct: 342 SLFMAVGIIDHETGTRDMRRLSGLWRAMPYTATLAMVAAAAMAGVPLLNGFLSKEMFLSE 401 Query: 414 LFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNT 473 + L L V+ + ++ ++ TF G P EE E Sbjct: 402 AVDNMGDHPIHLALP-----VLATLASAFTMLYSLRFIRQTFFGRPPHDLPEEPHEPVRW 456 Query: 474 MIVAMLLLAALCVLIALSASW-LAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPS 532 M + + +L C+ I L + + P + A + I Sbjct: 457 MRIPIEMLVLTCIAIGLVPNLTIGPALGRAVRAVLGDATPPYSLAIWHGFNA-------- 508 Query: 533 LLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPS 579 L + + + G+ RR G A G + Sbjct: 509 --PLAMSVVAMGGGIALYVLFGRRINTNPRGGPLADGPARRGLAVRT 553 >UniRef50_Q1IS54 Proton-translocating NADH-quinone oxidoreductase, chain L n=2 Tax=Acidobacteria RepID=Q1IS54_ACIBL Length = 710 Score = 334 bits (856), Expect = 8e-90, Method: Composition-based stats. Identities = 114/429 (26%), Positives = 194/429 (45%), Gaps = 41/429 (9%) Query: 74 TLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDN 133 +D LS+ +L ++ + ++ +YS YM+ G ++N+F+ SM+ L++ +N Sbjct: 102 GFLLDPLSSIWLLFVTGVGMLIHIYSTGYMKHDGG--YYRFFGYLNLFMFSMLTLILGNN 159 Query: 134 AFWFIVLFEMMSLSSWFLVIAR-QDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSL 192 V +E + L S+ L+ K++ A F G +++ + GS+ Sbjct: 160 YAMMFVGWEGVGLCSYLLIGFYFHKKSASTAANKAFITNRIGDAGVLVGMFTIAWYFGSI 219 Query: 193 DFASFRTLSLSP------GLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASAL- 245 +F + S + + F G K+ +PL+ WLP A P+ SAL Sbjct: 220 NFTKVTQAARSGIFHTGDYWITFATIALFIGACGKSAQLPLYVWLPDAM-EGPTPVSALI 278 Query: 246 MSGVMVKIGIFGILKV-AMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLL 304 + MV G++ + + A+ +LA + +V +GA++A+ L + DIKR+L Sbjct: 279 HAATMVTAGVYMVARSNALYILAPNSMK-----VVAIVGALTAVFAASIGLVQNDIKRVL 333 Query: 305 AWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIIS 364 A+STV +G + LA+G+ +FH+ HA FK LLFLG+G++I Sbjct: 334 AYSTVSQLGYMFLALGLG--------------AFTAGVFHVFTHAFFKALLFLGSGSVIH 379 Query: 365 RL-HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAV 423 + DM MGAL K++P T G LAI+ IPPL GF S+ +S + Sbjct: 380 AMSGEQDMRFMGALRKKIPVTFWTMFAGTLAIAGIPPLAGFFSKDEILWQAWSSNGGTFR 439 Query: 424 ALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTH--AEEAQEVPNTMIVAMLLL 481 L G +T + + ++ +TF G PR +H E P +M +++L Sbjct: 440 VLWGIG-------FLTALMTSLYMFRLVYLTFFGQPRMSHEVEHHVHESPKSMTGPLVIL 492 Query: 482 AALCVLIAL 490 A V Sbjct: 493 AICAVFAGF 501 >UniRef50_A1ASR6 NADH dehydrogenase (Quinone) n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ASR6_PELPD Length = 633 Score = 333 bits (855), Expect = 1e-89, Method: Composition-based stats. Identities = 159/625 (25%), Positives = 285/625 (45%), Gaps = 36/625 (5%) Query: 1 MDALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTL 60 M Q + S+ + ++ +L L L+ LS +T + GV+ + + L +G Sbjct: 1 MTPEQAVLLSIGICAAGAVVTLLLSMSKSLSGWLSFLTMVASGVLIVPRAVQVLTSGPAN 60 Query: 61 VARFAPPFEFADLTLR--MDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFM 118 + TLR +D LS+ +L+ L+ V +LYS+ ++ ++ K AA F+ Sbjct: 61 PHHPEAFYTLGGHTLRLYVDGLSSIFLLLAVLIGVCAALYSIVHVEKFPTKSAAMYHPFL 120 Query: 119 NIFIASMVALLVMDNAFWFI-VLFEMMSLSSWFLVIARQDKTSIN-AGMLYFFIAHAGSV 176 +F+ M +L + + WF +++M++ S+ L++ +K I A Y A V Sbjct: 121 LLFVGGMYGILSITDTMWFFCAFWQLMTIPSFILMLFESEKPGIKGAAFKYLVFMEAAMV 180 Query: 177 LIMIAFLL---------MGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPL 227 M + + + L ++ +PG + L GFG K GM P Sbjct: 181 AAMAGAAMIAGGPAEPGLAYDFDVLSEGIPALVATNPGALTGCLALFLVGFGIKVGMWPF 240 Query: 228 -HSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLW----WGILVMAI 282 W+P A+ AAPS +AL+SGVM K G++G+++ + L+ L + WG+ + + Sbjct: 241 GQLWVPDAYAAAPSPVTALISGVMSKTGVYGLMRTFLWLVPADVLGQYDMSRWGMALAIL 300 Query: 283 GAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDP---LLTVVGLL 339 G I+ G + + + D KRLLA+S+V +G I+LA+G + + D L + Sbjct: 301 GTITLFTGTMQGMKQDDTKRLLAFSSVGQLGYIILALGACVALVPSGDNRLLALAAIAFC 360 Query: 340 GALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIP 399 G L H +NH +FKGLLF AG++ T D+ KMG L K MP T A LI I+ +P Sbjct: 361 GGLLHAINHGIFKGLLFFSAGSLYQATGTQDLNKMGGLWKYMPVTGFAVLIASFGIAGVP 420 Query: 400 PLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAP 459 LNGF+S+W + + S + ++ +T + + ++K +G+ F Sbjct: 421 LLNGFVSKWSIYVATIQGSTSAK-----YLAVCAIIAILTSAMTLAMYIKFFGVAFLSRQ 475 Query: 460 RSTHAEEAQ-----EVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATV 514 + ++A EV T + L++A LC++I L+ + + + + + Sbjct: 476 STVVKQQAAKQGNLEVGMTQQLPQLIMALLCIVIGLAPGAVYQVLGQVLNTSRQGFAEKL 535 Query: 515 ASGIALVPGT---FHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAA-FRRTGDAWACGY 570 A + G +L + +++A+ L ++ S++ R++GDAW CGY Sbjct: 536 ADANTMSAGATTGLFAIGGGALYVPIVIAIVLAVAFVIVYTFSKQGGSTRKSGDAWLCGY 595 Query: 571 GWENA-MAPSGNGVMQPLRVVFSAL 594 E + + ++ F L Sbjct: 596 AREEECYRYAASNFYGEIKRCFGWL 620 >UniRef50_B3QXL9 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QXL9_CHLT3 Length = 643 Score = 333 bits (854), Expect = 1e-89, Method: Composition-based stats. Identities = 145/599 (24%), Positives = 247/599 (41%), Gaps = 69/599 (11%) Query: 71 ADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLV 130 +T R+DSLS M LV++ + + +YS+ YM + K A ++N+FI +M+ L++ Sbjct: 85 ISITYRIDSLSLLMGLVVTGVGSLIHIYSIGYM--HGDKDFARFFSYLNLFIFAMMNLIL 142 Query: 131 MDNAFWFIVLFEMMSLSSWFLVIARQDKT--------SINAGMLYFFIAHAGSVLIMIAF 182 ++ + +E + L S+ L+ DK + NA F + G ++IA Sbjct: 143 AESMPLMFLGWEGVGLCSYLLIGFWYDKKFDGVGITWTGNAANKAFIVNRIGDFAMLIAM 202 Query: 183 LLMGRESGSLDFASF--RTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPS 240 L+ + G LDF SL GLA + LL F G K+ +PL WLP A A P+ Sbjct: 203 FLIFQNIGRLDFTGILSGAASLDAGLAFWITLLIFIGSTGKSAQIPLFVWLPDAM-AGPT 261 Query: 241 HASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQD 299 SAL + MV GI+ I +++ L ++ +G ++A++ + + D Sbjct: 262 PVSALIHAATMVTSGIYLIARLSPLFLLAPETMH----IIAVVGTLTAIMAGTIGIVQND 317 Query: 300 IKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGA 359 IK++LA+STV +G + LA+G+ A+FH+ HA FK LFLG+ Sbjct: 318 IKKVLAYSTVSQLGYMFLALGIG--------------AFSTAIFHVATHAFFKACLFLGS 363 Query: 360 GAIISRLH-THDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLS 418 G++I +H D+ KMG L K+MP TA LI A++ P GF S+ + F Sbjct: 364 GSVIHGMHEEQDIRKMGGLFKKMPSTAITFLIATFALAGFPLTAGFFSKDAILAAAFGS- 422 Query: 419 RVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAM 478 + + +T + +++Y +TF G PR + E P M + + Sbjct: 423 ---------HNTLLYGVGVLTAVITAFYSMRLYTLTFLGNPRWSEHAHPHESPAVMTLPL 473 Query: 479 LLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLL 538 +LAAL ++ + + T A+ G FH LL+ L Sbjct: 474 WVLAALSLVGGF---------IGLPPVVQETNWIDGWLHSAVEIGHFHLSHETEWLLIAL 524 Query: 539 LAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLR 598 + GL + Y + +A + + F + + Sbjct: 525 SGGLSIVGLLIGYFI----------------YSKKLELAEKAKSQLAFIYQTFLNKYYID 568 Query: 599 QQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCL 657 + + + + D V + +L++ + LQ G + Y L Sbjct: 569 ELYEKIVSTPVQFLADKIFYPFDKYGIDGTV-NGTGTFFLKLSELFRKLQDGATQSYAL 626 >UniRef50_A6LXP7 Proton-translocating NADH-quinone oxidoreductase, chain L n=8 Tax=cellular organisms RepID=A6LXP7_CLOB8 Length = 617 Score = 332 bits (852), Expect = 3e-89, Method: Composition-based stats. Identities = 140/680 (20%), Positives = 274/680 (40%), Gaps = 90/680 (13%) Query: 7 LTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAP 66 L W + ++ ++A L + + + + +S ++ G V+ I + + +T Sbjct: 6 LAWMIPVFP--AIAFLIIGFITKKSKVISSAIAIGGMVLSFIFSLGVFYEVITSKVSINK 63 Query: 67 PFEFA----------DLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGF 116 P E+A ++ + +D L+A M+++++ + ++ +YSL YM+ KG + Sbjct: 64 PVEYAVSWLSAPIKIEVGVLIDPLTATMLIIVTFIGLLVEIYSLGYMKGE--KGFSRFFA 121 Query: 117 FMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKT-SINAGMLYFFIAHAGS 175 +++F +SM+ L++ +N F +E++ L S+ L+ D+ ++ A F G Sbjct: 122 NLSLFTSSMLGLVISNNYFQMFFFWELVGLCSYLLIGFYYDRPSAVKANKKAFVANRVGD 181 Query: 176 VLIMIAFLLMGRESGSLDFASFRTLSL---SPGLASAVFLLAFFGFGAKAGMMPLHSWLP 232 ++ L + G+ +F + + LL F G AK+ PLH WLP Sbjct: 182 FGFLVGMLCLFMAFGTFNFRELAASIPAYQDVVYLTIIALLIFAGPVAKSAQFPLHVWLP 241 Query: 233 RAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGV 291 A P+ SAL + MV G++ + + + +++ IG I+A + Sbjct: 242 DAM-EGPTPVSALIHAATMVAAGVYLLARGYILF----SSLHEVSLVIAYIGGITAFMAG 296 Query: 292 LYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALF 351 A+ ++D+KR+LA+ST+ +G +++A+GV G +FHL +HA F Sbjct: 297 TIAIVQRDLKRILAFSTMSQLGYMVMAMGVG--------------GFTSGMFHLTSHAFF 342 Query: 352 KGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTW 411 K LLFLGAG+II + D+ KMG L K+M + +I L+++ IPPL+GF S+ Sbjct: 343 KALLFLGAGSIIHSIGVQDIFKMGGLIKKMKLVSITFIIASLSLAGIPPLSGFFSKDEIL 402 Query: 412 QSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVP 471 + + L L +T L ++ I F G R H+ + P Sbjct: 403 TVTYEHGYIFLYYLGL----------ITAFLTAFYMARLVLIVFFGEEREKHS--VHKTP 450 Query: 472 NTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTP 531 M V +++L+ V A I ++ +A Sbjct: 451 WCMTVPLIILSVFSVFYGFINETFASYIYFQTSQIPEANLMVMSESVA------------ 498 Query: 532 SLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVF 591 G+ W + A++ + Q L Sbjct: 499 ----------AAFSGILLGWLIYGKKII------------SSEALSVKFRAIHQFLF--- 533 Query: 592 SALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGD 651 + + + K + +++ + + + S R+ +++ + SG Sbjct: 534 -NQYYINELYQ--WIYEKVVLNISYLFNWCDRNVVDGIFDNTTSFISRIGDKLRLIHSGR 590 Query: 652 FRLYCLYVVAALVVLLIAIA 671 + Y L + +++I +A Sbjct: 591 VQNYALIFFITIALIIIWLA 610 >UniRef50_Q21TB8 NADH dehydrogenase (Quinone) n=2 Tax=Proteobacteria RepID=Q21TB8_RHOFD Length = 671 Score = 332 bits (851), Expect = 3e-89, Method: Composition-based stats. Identities = 189/671 (28%), Positives = 309/671 (46%), Gaps = 19/671 (2%) Query: 3 ALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVA 62 QL+ L+L +LA L + R + L ++ ++ V+ + L G + Sbjct: 1 MNQLIEAVLVLMAGGALALLPARNIVRASAGL--VSQMIALVLVGSVALPVLFGGPDVTG 58 Query: 63 RFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREY--EGKGAAAMGFFMNI 120 + L R+D+L AF + + ++ S+Y++ Y+R+Y + +N+ Sbjct: 59 DMPWAYPIGTLHFRLDALGAFFLSWSLPMTLLGSVYAMGYLRKYFDSPRHIGVHFGLLNM 118 Query: 121 FIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIA-RQDKTSINAGMLYFFIAHAGSVLIM 179 S + + V ++A F++ +E+ +LS+W LVI ++ AG Y H G + ++ Sbjct: 119 ISLSFILVYVGEHAVTFLLGWEIAALSAWLLVIWDYPNQKVRFAGFNYLVSTHVGLIFLV 178 Query: 180 IAFLLMGRESGSLDFASFR-TLSLSPG-LASAVFLLAFFGFGAKAGMMPLHSWLPRAHPA 237 A +++ + S + +S +PG + + VFLL FG K+ P HSWLPRAH A Sbjct: 179 AAVMILYTNTQSWFLDDYGDWMSQNPGTVRNTVFLLLVTSFGLKSAFFPFHSWLPRAHAA 238 Query: 238 APSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAE 297 AP+H SALMSGV+ K G++ ++ L+ W G ++A SA++G LY + + Sbjct: 239 APAHVSALMSGVIHKAGLYALVHF---LMISGKPDEWMGWFLIAFSVTSAVVGGLYTVGQ 295 Query: 298 QDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFL 357 +D+KRLL +S+ ENVGI + GV +GLS P L +G G L H+LNHA FK LF Sbjct: 296 RDLKRLLGYSSTENVGIAGIGFGVGCLGLSWDMPTLVALGFGGGLLHVLNHAFFKCQLFY 355 Query: 358 GAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSL 417 AG + H D+E++G L K MP TA +IG +AISA+PP NGF SE+ + LF+ Sbjct: 356 AAGCVYQIKHVIDIERLGGLFKLMPVTAVCFIIGGVAISALPPFNGFASEFLIYSGLFTG 415 Query: 418 SRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVA 477 + A +L + LA G ++ + + +G+ F G R EA E M+ Sbjct: 416 ESINIWA-KLTLALTAAALAFVGAVSALSITRAFGVIFLGNARDASLPEAHEASGWMLFP 474 Query: 478 MLLLAALCVLIALSASWLAPKIMHIAHAFTN-TPPATVASGIALVPGTFHTQVTPSLLLL 536 M+L V++ ++ + + F + TP A + V GT ++ Sbjct: 475 MVLHTIGTVVLGVAPTLGFAMVAAPTALFLHLTPDAVALDTLQSVTGTLLR--IGAISAG 532 Query: 537 LLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWEN-AMAPSGNGVMQPLRVVFSALF 595 L+ + ++ L L R +R R W CGYG N M +G F + Sbjct: 533 LVAVLVVVLALVGLRARLKRQTPNRNA-TWGCGYGAPNARMQYTGGSFSADFAGRFKNIM 591 Query: 596 RLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLY 655 + L + + R+ I + + Q L D RL Sbjct: 592 LM---LQRKKAPAGYFPRDSYVITDCVDAVERRLFAVISHGDESASDLSQKLHEDDPRLA 648 Query: 656 CLYVVAALVVL 666 +AA+V + Sbjct: 649 FSAGLAAIVAI 659 >UniRef50_Q1IS43 Proton-translocating NADH-quinone oxidoreductase, chain L n=4 Tax=Bacteria RepID=Q1IS43_ACIBL Length = 676 Score = 331 bits (848), Expect = 7e-89, Method: Composition-based stats. Identities = 143/702 (20%), Positives = 256/702 (36%), Gaps = 76/702 (10%) Query: 4 LQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGI-----ISGITQLHAGV 58 L W + L A A LLG R KL +L ++ + + Sbjct: 3 QNLHLWIIPLLPLAGAAINGLLG-KRFPNKLVATIALFFTAASFGYFCYVASQFVHLSQI 61 Query: 59 TLVARFAPPFEFADLTL----RMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAM 114 V + + + +D L+ M+ V++ + + +YS YM G Sbjct: 62 PHVESYGTWIQVGSFKVEFGAYLDQLTLIMLGVVTGVGFLIHVYSAGYMEHEGG--YYRF 119 Query: 115 GFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDK-TSINAGMLYFFIAHA 173 ++N+F+ M+ L++ + V +E + L+S+ L+ K ++ AG F Sbjct: 120 FAYLNLFMFFMLTLVLGSSYLLMFVGWEGVGLASYLLIGFFFRKHSAAQAGKKAFITNRV 179 Query: 174 GSVLIMIAFLLMGRESGSLDFASF------RTLSLSPGLASAVFLLAFFGFGAKAGMMPL 227 G +I L+ + +L + + GL +A+ + G K+ +PL Sbjct: 180 GDFGFLIGLFLIIQNWNTLQYTEVFKAASGYGVETHAGLFTAIGICLLIGACGKSAQIPL 239 Query: 228 HSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAIS 286 + WLP A P+ SAL + MV G++ + + +LV IGA + Sbjct: 240 YVWLPDAM-EGPTPVSALIHAATMVTAGVYMVTRSNAIF----SRSPHALLLVACIGAAT 294 Query: 287 ALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLL 346 A+ + + DIKR+LA+ST+ +G + LA GV +FHL+ Sbjct: 295 AIFAATIGITQTDIKRVLAYSTISQLGYMFLACGVG--------------AYASGVFHLM 340 Query: 347 NHALFKGLLFLGAGAIISRLH-THDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFI 405 HA FK LLFL AG++I + DM MG L K +PWT I I+ PPL F Sbjct: 341 THAFFKALLFLAAGSVIHAVGGEQDMRNMGGLRKYIPWTFWVMTIATFTIAGFPPLAAFF 400 Query: 406 SEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAE 465 S+ ++S + V + + +T G+ + + +TF G R E Sbjct: 401 SKDEILWKVWSSESLRPVVGEGFNKFLWAVGLITAGVTSFYMFRQWFMTFFGEYRGAKTE 460 Query: 466 ------------------EAQEVPNTMIVAMLLLAALCVLIAL--SASWLAPKIMHIAHA 505 E E P MI +++LA L + + + Sbjct: 461 ASHGHAPAHGAHDDHGHGEPHESPMIMIAPLVVLAILSFAGGWVGIHNKFDNFLSPVTKL 520 Query: 506 FTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDA 565 P+ S L+L++ + G W + + Sbjct: 521 QMANAPSAEESATPHEEHGEEGGDKTELMLMIASVGMAVVGFGAAWYLYKAHPEK----- 575 Query: 566 WACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFW 625 MA + G L + + + + T+ L + + + Sbjct: 576 -------PGEMAKAAGG----LYTMVLNKYYVDEFYGATIVKPILLFSTSVLWRGIDVAV 624 Query: 626 DERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLL 667 + ++ + Q ++ ++ +QSG+ R Y +V V++ Sbjct: 625 IDGLLNGSAAGAQETSQGVRRMQSGNIRSYAGWVAVGAAVVI 666 >UniRef50_Q55429 NAD(P)H-quinone oxidoreductase chain 5 n=19 Tax=cellular organisms RepID=NU5C_SYNY3 Length = 681 Score = 330 bits (847), Expect = 9e-89, Method: Composition-based stats. Identities = 156/741 (21%), Positives = 280/741 (37%), Gaps = 130/741 (17%) Query: 1 MDALQLLTWSLILYLF--ASLASLFLLGLDRLAIKLSGITSL-----VGGVI----GIIS 49 M+ L L W + + A++ + L+ ++ KL I ++ +G + ++ Sbjct: 1 MELLYQLAWLIPVLPLFGATVVGIGLISFNQATNKLRQINAVFIISCLGAALVMSGALLW 60 Query: 50 GITQLHAGVTLVARFAPPFEF-ADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEG 108 Q HA + +A F ++ +D LSA M+++++ + ++ +Y+ YM G Sbjct: 61 DQIQGHASYAQMIEWASAGSFHLEMGYVIDHLSALMLVIVTSVALLVMIYTDGYMAHDPG 120 Query: 109 KGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQD-KTSINAGMLY 167 ++++F +SM+ L++ N + +E++ + S+ L+ D K + +A Sbjct: 121 --YVRFYAYLSLFASSMLGLVISPNLVQVYIFWELVGMCSYLLIGFWYDRKAAADACQKA 178 Query: 168 FFIAHAGSVLIMIAFLLMGRESGSLDFASF--------RTLSLSPGLASAVFLLAFFGFG 219 F G +++ L + +GS DF + + LS +A+ + +L F G Sbjct: 179 FVTNRVGDFGLLLGILGLYWATGSFDFGTIGERLEGLVSSGVLSGAIAAILAILVFLGPV 238 Query: 220 AKAGMMPLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGIL 278 AK+ PLH WLP A P+ SAL + MV G+F + ++ + Sbjct: 239 AKSAQFPLHVWLPDAM-EGPTPISALIHAATMVAAGVFLVARMYPVFEPIPVVMN----T 293 Query: 279 VMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGL 338 + G +A LG AL + DIK+ LA+ST+ +G +++A+G+ Sbjct: 294 IAFTGCFTAFLGATIALTQNDIKKGLAYSTISQLGYMVMAMGIG--------------AY 339 Query: 339 LGALFHLLNHALFKGLLFLGAGAIISRLHT---------HDMEKMGALAKRMPWTAAACL 389 LFHL+ HA FK +LFL +G++I + DM MG L K MP TA L Sbjct: 340 SAGLFHLMTHAYFKAMLFLCSGSVIHGMEGVVGHDPILAQDMRIMGGLRKYMPITATCFL 399 Query: 390 IGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVK 449 IG LAI IPP GF S+ F A P+ + T G+ + Sbjct: 400 IGTLAICGIPPFAGFWSKDEILGLAFQ-----------ANPLLWFVGWATAGMTAFYMFR 448 Query: 450 MYGITFCGAPRST--------------------------------------HAEEAQEVP 471 MY +TF G R H+ E E P Sbjct: 449 MYFMTFEGGFRGNDQEAKDGVLQFYGLLPNFGPGAMNVKELDHEAGHDDHGHSSEPHESP 508 Query: 472 NTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTP 531 TM ++ LA VLI L A + HA + Sbjct: 509 LTMTFPLMALAVPSVLIGLLGRPWANQFEAFIHAPGEVVEHAAEFEWGEFYVMAGNSIGI 568 Query: 532 SLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVF 591 +L+ + + ++ W + + + L + Sbjct: 569 ALIGITVASLMY----------------------WQHKFDPKVLAEKFPSLYQLSLNKWY 606 Query: 592 SALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGD 651 + + + R+ + + V + V T + +++L++G Sbjct: 607 FDDLYDKLFVQGSRRVARQIMEVDYKVIDGAVNLTGLV-------TLVSGEGLKYLENGR 659 Query: 652 FRLYCLYVVAALVVLLIAIAV 672 + Y L V A++ +I ++ Sbjct: 660 AQFYALIVFGAVLGFVIVFSL 680 >UniRef50_C0GDB1 NADH dehydrogenase (Quinone) n=2 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GDB1_9FIRM Length = 782 Score = 330 bits (846), Expect = 1e-88, Method: Composition-based stats. Identities = 135/520 (25%), Positives = 239/520 (45%), Gaps = 23/520 (4%) Query: 8 TWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVI--GIISGITQLHAGVTLVARFA 65 + SL + R + KL I +++ +I GI+ + L L FA Sbjct: 19 LLPVFAVAVPLAGSLLVFFAGRFSEKLRDICAVITALITFGIVFSMYPLVQQAVLQYEFA 78 Query: 66 PPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASM 125 F + R+D ++S + + +LYS+ YM G+ F+ + Sbjct: 79 -KFLQVSIHFRVDFFGFVFAALMSCIWFLATLYSIAYMEH--GRAKNRYYVFLLSTLGHC 135 Query: 126 VALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLM 185 + ++++ + F + FE+M+ SS+ LVI + ++ G + ++ G + +++A L+ Sbjct: 136 LGVVLVGDLFSLFLFFELMTFSSYVLVIHEETPDAMAGGAVTLYLGVFGGLCLLMAIFLL 195 Query: 186 GRESGSLDFASF-RTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASA 244 G+++ ++ S V L GFG KAGM+PLH WLP+AHP AP+ ASA Sbjct: 196 YFNVGTMEIIPLYEQIAASAINPYTVVTLFLVGFGIKAGMVPLHIWLPKAHPVAPAPASA 255 Query: 245 LMSGVMVKIGIFGILKVAMDLLAQTGLP---------LWWGILVMAIGAISALLGVLYAL 295 L+SG+M+K G +GI +V + + + +G ++ +G I+ LG AL Sbjct: 256 LLSGLMIKAGAYGIFRVVGMIFTPSEFSEVAVPSIVSVNFGYAIIWMGIITMFLGAFMAL 315 Query: 296 AEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLL 355 K++LA+S+V +G ILL VG A +G GAL+H++NHA FK L Sbjct: 316 LSTGAKKILAYSSVSQMGYILLGVGTAAYLGFAG-----PMGFAGALYHIINHAFFKAGL 370 Query: 356 FLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLF 415 F+ G+I H D+ ++ +AK++P+ A LIG I IP NG+ S+ ++ Sbjct: 371 FMMVGSIYMITHNLDITQVRGMAKKVPFIAVTFLIGYAGIGGIPGFNGYGSKTILHHAIV 430 Query: 416 SLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMI 475 + + +A + VT + + F K++ F G + +++ + Sbjct: 431 DAANLHGSVPLH---VAEKIFVVTSAMTLCYFAKLFRGLFLGDVPEKYDKKSYNFTWPVY 487 Query: 476 VAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVA 515 + A+ + I L +L +++ A A P VA Sbjct: 488 AVLGTFGAIIIAIGLFPHFLLNRMVIPAMAGFTYDPYKVA 527 >UniRef50_D0LZ05 Proton-translocating NADH-quinone oxidoreductase, chain L n=6 Tax=cellular organisms RepID=D0LZ05_HALO1 Length = 801 Score = 329 bits (845), Expect = 2e-88, Method: Composition-based stats. Identities = 152/670 (22%), Positives = 264/670 (39%), Gaps = 49/670 (7%) Query: 16 FASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGV--TLVARFAPPFEFADL 73 FA++ + L + + + G SL + L G+ TL DL Sbjct: 44 FAAVLPVVLACVVSIVVIFVGSGSLFAQFQAFDATGNNLLEGLHQTLYTWIEIGTLKIDL 103 Query: 74 TLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDN 133 R+D+LS+ M+LVI+ + + +YS+ YM AA ++N+F SM+ L++ D+ Sbjct: 104 AFRVDTLSSVMLLVITFIGSLIHIYSIGYMEHEP--RYAAYFGYLNLFTGSMLILVLGDS 161 Query: 134 AFWFIVLFEMMSLSSWFLVIARQDKTS-INAGMLYFFIAHAGSVLIMIAFLLMGRESGSL 192 + +E + L S+ L+ ++T+ +AG F + G +I L+ + G L Sbjct: 162 LPVMFIGWEGVGLCSYLLIGFWFNETANADAGRKAFVVNRVGDFSFLIGMFLLFQMVGGL 221 Query: 193 DFASFRTLSL----------SPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHA 242 D+ R+ + +A L F G K+ +PL+ WLP A A P+ Sbjct: 222 DYEVLRSDTAMSIYDNAFWGGERIAFWAGLFLFIGACGKSAQIPLYVWLPDAM-AGPTPV 280 Query: 243 SAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIK 301 SAL + MV G++ + +++ + T I+V +GA++AL A A+ D K Sbjct: 281 SALIHAATMVTAGVYMVARLSFLYASSTTAM----IIVSTVGALTALAAAFMAFAQTDFK 336 Query: 302 RLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGA 361 ++LA+STV +G + + VGV + +FHL+ HA FK LFL AG+ Sbjct: 337 KVLAYSTVSQLGFMFVGVGVG--------------AYVAGVFHLITHAFFKAGLFLSAGS 382 Query: 362 IISRL-HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRV 420 ++ + + D+ KMG L K MP T A ++ LAI I P GF S+ F + Sbjct: 383 VMHAMSGSGDIMKMGGLRKYMPRTHGAFVVYWLAICGIVPFAGFFSKDEILAGAFFTTPQ 442 Query: 421 EAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHA--EEAQEVPNTMIVAM 478 +L + ++Y + F G R+ E P +M + Sbjct: 443 GWP--PGYNYFLWAVLTLAALGTAFYMSRLYFLVFSGECRADEETKAHIHESPPSMTWPL 500 Query: 479 LLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLL 538 +LLA L+ + HI T A + + P + V SL + Sbjct: 501 ILLAVGTALVGFI------GLPHIEGIHLPTILADWLAPSLVRPDMEYAAVGQSLGGFVH 554 Query: 539 L-AMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWE-NAMAPSGNGVMQPLRVVFSALFR 596 ++ ++ GL L +A G + G G+ + L+ Sbjct: 555 AHSLGMVGGLMGLALVLGALGIFIGYKLYANGVDPRIERLTGEGGGLRGWFTWSKNKLYV 614 Query: 597 LRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYC 656 +R + +A D + T + + +Q+G Y Sbjct: 615 DEAYDTVLVRPFRWIASAIFEFVD-RFVIDLIFVNGAAVVTDVFGRVSRWVQNGQVHRYM 673 Query: 657 LYVVAALVVL 666 ++ + Sbjct: 674 FALLLGSFAI 683 >UniRef50_B8J1C9 Proton-translocating NADH-quinone oxidoreductase, chain L n=4 Tax=Bacteria RepID=B8J1C9_DESDA Length = 642 Score = 329 bits (843), Expect = 3e-88, Method: Composition-based stats. Identities = 152/676 (22%), Positives = 263/676 (38%), Gaps = 75/676 (11%) Query: 18 SLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAPPFEFADLT--- 74 ++ + A L +V I++ ++ GV + A +L+ Sbjct: 17 AVTLVCGRWWGSRAHWLPIAAIVVSLCCSILALRDVMN-GVIVNADVHNWITSGNLSVSF 75 Query: 75 -LRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDN 133 +D L+A M++V++ + + +YS+ YM+ +G ++ +F SM+ L++ +N Sbjct: 76 GFLVDQLTAVMLIVVTSVSTLVHIYSVGYMKGEDG--YYRFFAYLALFSFSMLMLVLSNN 133 Query: 134 AFWFIVLFEMMSLSSWFLVIARQDKTSI-NAGMLYFFIAHAGSVLIMIAFLLMGRESGSL 192 +E + LSS+ L+ +KTS +AG F + G ++ + GSL Sbjct: 134 FLQLFFGWEAVGLSSYLLIGFYYEKTSASDAGKKAFIVNRFGDFGFLLGLFCIFTLFGSL 193 Query: 193 DFA------------SFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPS 240 + S+ +S A+ V LL F G K+ +PLH WLP A P+ Sbjct: 194 HYDNVFARAGLLQGLSYTIGGISIDAATLVCLLLFCGAAGKSAQLPLHVWLPDAM-EGPT 252 Query: 241 HASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQD 299 SAL + MV G+F + + L ++ +GA++AL AL + D Sbjct: 253 PVSALIHAATMVTAGVFLVARCNALF----SLSPTALGVITVVGALTALFAATIALTQTD 308 Query: 300 IKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGA 359 IKR++A+ST+ + + + GV +FHL HA FK LLFLG Sbjct: 309 IKRVVAYSTISQLAFMFIGCGVG--------------AYAAGIFHLFTHAFFKALLFLGC 354 Query: 360 GAIISRLH-THDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLS 418 G++I +H DM +MG L K MP T L+ L+IS +P L GF S+ F+ Sbjct: 355 GSVILGMHHEQDMRRMGGLRKYMPVTCVTFLLASLSISGVPGLAGFFSKDEILLMAFNAD 414 Query: 419 RVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRST--HAEEAQEVPNTMIV 476 AG A + L +++ F G R T E +E P + + Sbjct: 415 TT-------AGYFAWGVGTFVAFLTAFYSFRLFFSIFYGEFRGTQHQREHLRESPLVVTI 467 Query: 477 AMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLL 536 +LLLA V P ++ ++ + V + G + + ++ Sbjct: 468 PLLLLACGAVGAGWLG---IPHVLGGSNLWAGFLEPVVGHPHLHLDGPAELMLMGASVVA 524 Query: 537 LLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFR 596 + + L AW + + L +F +R Sbjct: 525 GVCGIGL---------------------AWFMYHRQTEWPERVVQSFPR-LYRLFLHKYR 562 Query: 597 LRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYC 656 + + L + + E V+ + A RL+ ++ Q G Y Sbjct: 563 VDEIYAACLVRPVLWLADHVLLRVVDTKGIEGVVNGLPRAIGRLSVRLRRFQDGHVAHYL 622 Query: 657 LYVVAALVVLLIAIAV 672 ++ A VVLLI + + Sbjct: 623 AWLAGASVVLLIVLQL 638 >UniRef50_Q9UYN2 Hydrogenase 4, component B or formate hydrogen lyase, subunit 3 n=1 Tax=Pyrococcus abyssi RepID=Q9UYN2_PYRAB Length = 647 Score = 329 bits (843), Expect = 3e-88, Method: Composition-based stats. Identities = 150/551 (27%), Positives = 256/551 (46%), Gaps = 37/551 (6%) Query: 34 LSGITSLVGGVIGIISGITQLHAGVTLVARFAPPFEFADLTLRMDSLSAFMVLVISLLVV 93 L G++ V + + L + + L + +D S +L++ +L Sbjct: 18 LGGLSKKAFKVSSAFAALASLSIVALVFNLKPVEGKLLGLPVYIDGFSLIFMLILGILGF 77 Query: 94 VCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVI 153 SLYS+ YM + GK N F+ SM +L+ N WF+ +E+M+LSS+ L+ Sbjct: 78 SASLYSIPYMERHPGK-EWVYAVAYNAFLLSMFLILITSNLVWFVFFWELMTLSSFILIT 136 Query: 154 ARQDKTSINAGMLYFFIAHAGSVL-IMIAFLLMGRESGSLDFASFRTL-SLSPGLASAVF 211 D+ + G+ Y+ H + + I+ + GSLD ++ L SL ++ Sbjct: 137 W--DEKDFDPGIKYYIAMHILTTFPLFISLGVSYSFLGSLDAMTYPNLKSLPSSATLLLY 194 Query: 212 LLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGL 271 F AK+G++P H W+P + APS+ S+L++G M KI +FG++++ L Sbjct: 195 ASFLIAFMAKSGIVPFHFWVPSTYKVAPSNISSLLAGAMEKIAVFGLIRIMYTALP---T 251 Query: 272 PLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDP 331 P G LV +GA++ +G LYAL E D K+LLA+ ++ +G I L +G+ + D Sbjct: 252 PKSIGYLVALLGAVTLTVGTLYALRESDAKKLLAYHSIGQMGYIWLGIGIGL----SLDS 307 Query: 332 LLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIG 391 L +G+ +FH LNH+LFKG LFL AG++ +++ +G LA+RM WT A L+ Sbjct: 308 PLGALGMFAGIFHALNHSLFKGSLFLSAGSVEYATGETNLDNLGGLAERMKWTGLATLLA 367 Query: 392 CLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMY 451 LAIS +PP NGF+S+W + + ++ + V+ + + F+K Y Sbjct: 368 SLAISGVPPFNGFLSKWLIYTAGYNSGDM-------VLSFGAVLAVFISAVTLASFIKFY 420 Query: 452 GITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPP 511 F G S + EVP +M+V L+L++LC++I + + + P I A +T Sbjct: 421 TSQFGGE--SERYRDVSEVPLSMVVPQLILSSLCLIIGIFPALVVPLINEPIGAPIST-- 476 Query: 512 ATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYG 571 +L T +P + LL++ + + + W CG Sbjct: 477 -------SLYLNFDSTAFSPLIFGLLIVTLAFGTYIGL-------EPRGEEAEPWDCGAS 522 Query: 572 WENAMAPSGNG 582 + Sbjct: 523 FIERDEYRVRA 533 >UniRef50_P31971 NAD(P)H-quinone oxidoreductase chain 5 n=25 Tax=cellular organisms RepID=NU5C_SYNP2 Length = 664 Score = 329 bits (843), Expect = 3e-88, Method: Composition-based stats. Identities = 164/723 (22%), Positives = 277/723 (38%), Gaps = 111/723 (15%) Query: 1 MDALQLLTWSLILYLF--ASLASLFLLGLDRLAIKLSGITSL---------VGGVIGIIS 49 M+ L W + + A + + L+ L++ KL + ++ + G++ Sbjct: 1 MEPLYQYAWLIPVLPLLGAMVIGIGLISLNKFTNKLRQLNAVFVLSLIGTSMALSFGLLW 60 Query: 50 GITQLHAGVTLVARFAPPFEF-ADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEG 108 Q H T +A +F + +D LSA M ++++ + ++ +Y+ YM G Sbjct: 61 SQIQGHEAFTYTLEWAAAGDFHLQMGYTVDHLSALMSVIVTTVALLVMIYTDGYMAHDPG 120 Query: 109 KGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQD-KTSINAGMLY 167 +++IF +SM+ L+ N + +E++ + S+ L+ D K + +A Sbjct: 121 --YVRFYAYLSIFSSSMLGLVFSPNLVQVYIFWELVGMCSYLLIGFWYDRKAAADACQKA 178 Query: 168 FFIAHAGSVLIMIAFLLMGRESGSLDFASF--------RTLSLSPGLASAVFLLAFFGFG 219 F G +++ L + +GS +F T +S LA +L F G Sbjct: 179 FVTNRVGDFGLLLGMLGLYWATGSFEFDLMGDRLMDLVSTGQISSLLAIVFAVLVFLGPV 238 Query: 220 AKAGMMPLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGIL 278 AK+ PLH WLP A P+ SAL + MV G+F + ++ + Sbjct: 239 AKSAQFPLHVWLPDAM-EGPTPISALIHAATMVAAGVFLVARMYPVFEPIPEAMN----V 293 Query: 279 VMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGL 338 + GA +A LG AL + DIK+ LA+ST+ +G +++A+G+ G Sbjct: 294 IAWTGATTAFLGATIALTQNDIKKGLAYSTMSQLGYMVMAMGIG--------------GY 339 Query: 339 LGALFHLLNHALFKGLLFLGAGAIISRLHT---------HDMEKMGALAKRMPWTAAACL 389 LFHL+ HA FK +LFLG+G++I + DM MG L K MP TA L Sbjct: 340 TAGLFHLMTHAYFKAMLFLGSGSVIHGMEEVVGHNAVLAQDMRLMGGLRKYMPITATTFL 399 Query: 390 IGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVK 449 IG LAI IPP GF S+ F A P+ + T G+ + Sbjct: 400 IGTLAICGIPPFAGFWSKDEILGLAFE-----------ANPVLWFIGWATAGMTAFYMFR 448 Query: 450 MYGITFCGAPRST--------------------HAEEAQEVPNTMIVAMLLLAALCVLIA 489 MY +TF G R T H + E P TM ++ LA VLI Sbjct: 449 MYFLTFEGEFRGTDQQLQEKLLTAAGQAPEEGHHGSKPHESPLTMTFPLMALAVPSVLIG 508 Query: 490 LSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYW 549 L + + F + + A G T+ + +A+ + Sbjct: 509 LLG-------VPWGNRFEAFVFSPNEAAEAAEHGFELTEFLIMGGNSVGIALIGITIASL 561 Query: 550 LWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNK 609 ++ + R R L + + T RL + Sbjct: 562 MYLQQRIDPARLA--------------EKFPVLYQLSLNKWYFDDIYNNVFVMGTRRLAR 607 Query: 610 GLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLIA 669 + V R AT + ++++++G + Y L V A++ +I Sbjct: 608 QILEVDYRVVDGAVNLTGI-------ATLLSGEGLKYIENGRVQFYALIVFGAVLGFVIF 660 Query: 670 IAV 672 +V Sbjct: 661 FSV 663 >UniRef50_B3EIA1 Proton-translocating NADH-quinone oxidoreductase, chain L n=27 Tax=cellular organisms RepID=B3EIA1_CHLL2 Length = 770 Score = 328 bits (840), Expect = 5e-88, Method: Composition-based stats. Identities = 133/543 (24%), Positives = 222/543 (40%), Gaps = 74/543 (13%) Query: 1 MDALQLLTWSLILYLFASLASLFLL--GLDRLAIKLSGITSLVGGVIGIISGITQLHAGV 58 M +L L+ +++L S L L R + + + + + Sbjct: 1 MHSLIQLSIAVLLLPLLSFVILIFFNKRLPRRGDFIGVGILGTTFALSLYIFWSVVVQAY 60 Query: 59 TLVARFAPPFEFADLT-------------LRMDSLSAFMVLVISLLVVVCSLYSLTYMRE 105 R A F + DL + +D+L+A M+ +++L+ + LYS YM Sbjct: 61 DPAFRVAWDFTWIDLGNVPGVGPLVIKMGIVIDNLTAIMLAMVTLISFLVHLYSTGYMAG 120 Query: 106 YEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDK-TSINAG 164 G ++ IF SM+ +++ DN F + +E++ LSS+ L+ +K ++ +A Sbjct: 121 DPRYG--RFFAYLGIFTFSMLGIVLSDNLFAIYIFWELVGLSSYLLIGFYFEKDSAADAQ 178 Query: 165 MLYFFIAHAGSVLIMIAFLLMGRESGSLDFASF------RTLSLSPGLASAVFLLAFFGF 218 F G + + + L++ + + + +S +A +L F G Sbjct: 179 KKAFLANRVGDIGMWLGILILYSQFHTFSYQEIFANLAAGKFGMSQAWLTAAGILLFMGC 238 Query: 219 GAKAGMMPLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGI 277 K+ PLH WLP A P+ SAL + MV G++ + ++ + L A Sbjct: 239 VGKSAQFPLHVWLPDAM-EGPTPVSALIHAATMVAAGVYFVARIFVLLTADA------LH 291 Query: 278 LVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVG 337 ++ IGA +A + A+ + DIKR+LA+STV +G ++L +GV Sbjct: 292 VIAFIGAFTAFMAATIAITQHDIKRVLAYSTVSQLGYMVLGLGVG--------------A 337 Query: 338 LLGALFHLLNHALFKGLLFLGAGAIISRL-HTHDMEKMGALAKRMPWTAAACLIGCLAIS 396 ALFHL+ HA FK LFLG+GAII + H DM MG L K MPWT A + LA++ Sbjct: 338 YSAALFHLVTHAFFKACLFLGSGAIIHAMHHEQDMRWMGGLRKNMPWTFATFTLATLALA 397 Query: 397 AIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFC 456 +P +GF+S+ + E + P A+ L + + F Sbjct: 398 GLPLTSGFMSKDAILAGAIGFANAEGGGIYYLIPFLGFFSAM---LTAFYMGRQIWLVFF 454 Query: 457 GAPRS------------------------THAEEAQEVPNTMIVAMLLLAALCVLIALSA 492 G R+ A EV M +++LAAL + S Sbjct: 455 GESRTHLKPADDHHHGHDAHAAHGHDDHHEEAHGVHEVAWNMRTPLVILAALSIFAVYSP 514 Query: 493 SWL 495 L Sbjct: 515 DPL 517 >UniRef50_D2QSX4 Proton-translocating NADH-quinone oxidoreductase, chain L n=2 Tax=Bacteroidetes RepID=D2QSX4_9SPHI Length = 642 Score = 328 bits (840), Expect = 6e-88, Method: Composition-based stats. Identities = 151/686 (22%), Positives = 270/686 (39%), Gaps = 78/686 (11%) Query: 4 LQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHA------- 56 ++LL + L+ + LG R+ L+G S V + ++ A Sbjct: 3 IELLCALIPLFPLIGF-LINGLGFRRVPKGLAGAISTVAVLASFLTSAYLFGAFLGNANL 61 Query: 57 -------GVTLVARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGK 109 TL + + + ++D LS M+LV++ + + LYS+ YM EG Sbjct: 62 SANAGPQIATLFDWISVGDLHINFSFQIDQLSLLMLLVVTGVGSLIHLYSIGYMSHDEGF 121 Query: 110 GAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSIN-AGMLYF 168 G F+N+FI M+ L++ N + +E + L S+ L+ S N A F Sbjct: 122 GK--FMAFLNLFIFFMLLLVMGSNYVIMFIGWEGVGLCSYLLIGFWNKNISYNNAARKAF 179 Query: 169 FIAHAGSVLIMIAFLLMGRESGSLDFASF----RTLSLSPGLASAVFLLAFFGFGAKAGM 224 + G + ++ ++ G++++ +L++ A+ LL F G K+ Sbjct: 180 VMNRIGDLGFLLGIFMLINTFGTVEYVDIFKQATSLAVGDKTILAITLLLFVGAMGKSAQ 239 Query: 225 MPLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIG 283 +PL++WLP A A P+ SAL + MV GI+ +++ + L ++ I Sbjct: 240 VPLYTWLPDAM-AGPTPVSALIHAATMVTAGIYMVVRSNVLY----TLAPLTLEIIGGIA 294 Query: 284 AISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALF 343 ++ALL L + DIK++LA+STV +G + L + + +F Sbjct: 295 IVTALLAASIGLLQNDIKKVLAYSTVSQLGYMFLGL--------------SATAYTAGMF 340 Query: 344 HLLNHALFKGLLFLGAGAIISRL-HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLN 402 H++ HA FK LLFLGAG++I + D+ KMG L K +P T LIG +AIS +PP Sbjct: 341 HVITHAFFKALLFLGAGSVIHAMSDEQDIRKMGGLRKALPVTFITFLIGTIAISGLPPFA 400 Query: 403 GFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRST 462 GF S+ +F ++ + + + GL ++ +TF G R T Sbjct: 401 GFFSKDEILAHVFEHNK-----------LLWGLGVLGSGLTSFYMFRLLFLTFFGEFRGT 449 Query: 463 HA--EEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIAL 520 E P TM +++LA L ++ + A Sbjct: 450 EEQRHHLHESPATMTAPLVVLAILSIIGGGLNLPGGGWLSGFMAPIFEGSKQVSPEAFAE 509 Query: 521 VPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSG 580 T+ + + + L+ R A Sbjct: 510 STIEHSTEYILMAVSAGVALLALIIAYVMYISRQAVPAPESAER---------------- 553 Query: 581 NGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRL 640 P +V+++ + +R +GL + V+ + Q++ Sbjct: 554 ---SLPEQVIYNKYYVDELYETIIVRPIRGLGDAFYSFG---EGLVDGVVNGVAWVVQKI 607 Query: 641 AKEIQHLQSGDFRLYCLYVVAALVVL 666 + +++ LQSG Y L +V ++VV+ Sbjct: 608 SAQLRLLQSGSIGFYVLAMVVSIVVI 633 >UniRef50_A7HHY8 Proton-translocating NADH-quinone oxidoreductase, chain L n=4 Tax=Anaeromyxobacter RepID=A7HHY8_ANADF Length = 676 Score = 328 bits (840), Expect = 7e-88, Method: Composition-based stats. Identities = 159/687 (23%), Positives = 262/687 (38%), Gaps = 73/687 (10%) Query: 2 DALQLLTWSLILYLFASLAS--LFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVT 59 A + W++IL+ A L + + + L + +++G +I + G Sbjct: 9 TAAESYLWAIILFPLAGAIVNGLVGRRIGKGNVTLVALGAMIGALIVSTVAFAWVVQGGV 68 Query: 60 LVARFAPPFEFAD----------LTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGK 109 L R P A L +D LS M++V++ + + +YS +YM + Sbjct: 69 LHFRGEPWIRVAGPDGRALVSIGWGLFVDRLSGTMIMVVTGVGTLIHIYSASYMSHEDDA 128 Query: 110 GAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTS-INAGMLYF 168 G A ++N+F+A+M+ L++ D V +E + L S+ L+ + AG F Sbjct: 129 GYARYFTYLNLFVAAMLTLVLGDTLVLTFVGWEGVGLCSYLLIGFWYTDPAKAFAGRKAF 188 Query: 169 FIAHAGSVLIMIAFLLMGRESGSLDFASFRTLSLS-----------------PGLASAVF 211 G +I + G+ + + ++ + + Sbjct: 189 VTNRIGDFGFLIGLFALLSIFGTASYGDLQAIARTIDPAATIQVGTFAGRTFQWAITFAL 248 Query: 212 LLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTG 270 + F G K+ +PL+ WLP A A P+ SAL + MV G++ + + A Sbjct: 249 IGLFVGACGKSAQLPLYVWLPDAM-AGPTPVSALIHAATMVTAGVYLVARNAYLF----S 303 Query: 271 LPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHD 330 L V +GA++AL L A + DIK++LA+STV +G + + VGV Sbjct: 304 LAPAAMATVTIVGALTALFAALIAFVQTDIKKVLAYSTVSQLGFMFIGVGVG-------- 355 Query: 331 PLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLH-THDMEKMGALAKRMPWTAAACL 389 + HL+ HA FK LFLGAG+++ + D+ KMG L K+MP TAA Sbjct: 356 ------AWWAGVLHLVTHAFFKACLFLGAGSVMHGMGDETDIRKMGGLLKKMPHTAATFG 409 Query: 390 IGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVK 449 I LAI+ PL+GF S+ + A G IA V+ AV + Sbjct: 410 IATLAITGFVPLSGFWSKDAILGNALFS---HNPAWHQVGQIAYVLGAVAALGTAFYMSR 466 Query: 450 MYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNT 509 ++ +TF G PR+ AE A E M + + +LA L V+ A+ A + + H+ F Sbjct: 467 LFFLTFVGKPRTHAAEHAHESSPVMTIPLWILAILAVVAAVLALPVHGPLGHVFERFVQ- 525 Query: 510 PPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACG 569 P + L H PS + L L AW Sbjct: 526 PVFAAGTARLLEVEHLHAGEHPSWPYFAAWGIAALGTLV----------------AWTM- 568 Query: 570 YGWENAMAPSGNGVMQP-LRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDER 628 Y P + P + FR+ + + L D Sbjct: 569 YAGPAIAVPGKLALAFPRVYRFAYDKFRVDELYQAIIIEPLRLVAYGLWRIVDVFAIDGL 628 Query: 629 VIRPIVSATQRLAKEIQHLQSGDFRLY 655 + + A + Q+GD + Y Sbjct: 629 FVNGVARAVGFAGSMFRVAQNGDLQRY 655 >UniRef50_B2A3T0 NADH dehydrogenase (Quinone) n=2 Tax=Clostridia RepID=B2A3T0_NATTJ Length = 500 Score = 327 bits (838), Expect = 1e-87, Method: Composition-based stats. Identities = 129/508 (25%), Positives = 248/508 (48%), Gaps = 32/508 (6%) Query: 6 LLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGII---SGITQLHAGVTLVA 62 + + +++ LF + + + +++ +I + S+V I + + + G + Sbjct: 7 VYSLPMLIVLFPLIMTGVIFLVEQKSIFGRNLLSVVTSAITFLMVAAMYPVVIKGEVIYY 66 Query: 63 RFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFI 122 + A ++ +D+L + L+ S + ++ ++YSL YM++ G +++ + Sbjct: 67 QLANLIPPFGISFMVDTLGFGLSLLASFIWMLVTIYSLEYMKKENYTG--RYYPALSLTL 124 Query: 123 ASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAF 182 + + L + + F + FE+MSL S+ L+I + K ++ AG Y + G + + Sbjct: 125 SGSMGLFLAGDLFTMFIFFEIMSLVSYLLIIHNETKEALRAGYKYLIVTIIGGLFLFFGI 184 Query: 183 LLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHA 242 ++ S ++ + +S LA A FL GFG KAGM+PLH WLP AHP APS A Sbjct: 185 IITFELSQTITLSEMGIISTPTSLAFAGFLSFVIGFGMKAGMVPLHIWLPEAHPVAPSPA 244 Query: 243 SALMSGVMVKIGIFGILKVAMDLLA-QTGLPLWWGILVMAIGAISALLGVLYALAEQDIK 301 SAL+SG+M+K G +G++++ + Q L W +++ + I+ LG A+ ++D+K Sbjct: 245 SALLSGIMIKTGAYGLIRIMFHVFDYQMILEANWHLILAVVAVITIFLGSAVAITQEDLK 304 Query: 302 RLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGA 361 R LA+S++ +G ILL + + LT + G +FH+ +HA K LFL AGA Sbjct: 305 RRLAYSSIGQMGYILLGLAI-----------LTETAMTGDIFHIFSHAFMKSTLFLAAGA 353 Query: 362 IISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVE 421 +I + + + + + MP T + I LA+ IPPLNGFIS+W + Sbjct: 354 MIMKTGKKKIADLKGVGRAMPLTMLSFTIAALAMIGIPPLNGFISKWSLSLGALEAGQ-- 411 Query: 422 AVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAE-----EAQEVPNTMIV 476 P +V+L ++ + + ++ + + G T + E P M++ Sbjct: 412 --------PYYVVILLISSLMNSVYYLPIINTAYFGKSEETDDDVESKGVISEAPMKMVM 463 Query: 477 AMLLLAALCVLIALSASWLAPKIMHIAH 504 + +L C++++L + + ++ +A Sbjct: 464 PVAILGFSCLILSLFPTNIPYELAQLAA 491 >UniRef50_C1SM60 NADH dehydrogenase subunit L n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SM60_9BACT Length = 638 Score = 326 bits (837), Expect = 1e-87, Method: Composition-based stats. Identities = 148/686 (21%), Positives = 275/686 (40%), Gaps = 82/686 (11%) Query: 12 ILYLFASLASLFLLGL--DRLAIKLSGITSLVGGVIGIISGITQLHA---GVTLVARFAP 66 +L L L + + GL R L+ I ++ G + + + + G ++ Sbjct: 5 VLTLLGPLVAFLINGLLGRRYIKNLAPIVAIAGVSVSFVCALILFYLVSQGFSVDGTLYT 64 Query: 67 PFEFA----DLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFI 122 + +D LS+ M++V++ + ++ +YS+ YM + G ++++F Sbjct: 65 WVVAGKLSIPFGILVDPLSSIMLIVVTTISLMVHIYSIGYM--HGDPGFWRFFTYLSVFT 122 Query: 123 ASMVALLVMDNAFWFIVLFEMMSLSSWFLVIAR-QDKTSINAGMLYFFIAHAGSVLIMIA 181 SM+ L++ +N V +E++ LSS+ L+ K++ +A F + G I Sbjct: 123 LSMLVLVLGNNFLMLFVGWELVGLSSYLLIGFWFHKKSAADACKKAFVMNRIGDFGFYIG 182 Query: 182 FLLMGRESGSLDFASFRTLSLSPGLASAVFLLA--------------FFGFGAKAGMMPL 227 LL+ S++++ + A F+L F G K+ PL Sbjct: 183 LLLVIVTFRSVNYSDAFNSEAIHHIKEAGFMLFGMKVSLIDLMTFGLFCGAMGKSAQFPL 242 Query: 228 HSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAIS 286 H+WLP A P+ SAL + MV G++ + + ++ GA++ Sbjct: 243 HTWLPDAM-EGPTPVSALIHAATMVTAGVYMVARCNALF----SEAHMTSQFIVFAGAMT 297 Query: 287 ALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLL 346 A LG L + D+KR+LA+STV +G +++A GV + A+FHL Sbjct: 298 AFLGASIGLTQYDLKRILAYSTVSQLGYMIMATGVG--------------AYVAAIFHLF 343 Query: 347 NHALFKGLLFLGAGAIISRLHTH-DMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFI 405 HA+FKGLLFL +G+++ +H D+ MG L K+MP+T LIGC+AI+ IPPL GF Sbjct: 344 THAMFKGLLFLCSGSVMHAMHDQLDVRLMGGLKKKMPFTHWTYLIGCIAIAGIPPLAGFW 403 Query: 406 SEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHA- 464 S+ F+ IA + G+ + Y + F G PR H Sbjct: 404 SKDEILAMTFASGHN----------IAWFVGTAVAGMTAFYMFRSYFLVFQGTPRDQHLH 453 Query: 465 EEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGT 524 + A E P +M ++ LA L + + L + + + + +T V + P Sbjct: 454 DHAHESPFSMWGPLVFLAFLSIFVGLVFGY------PLENGYIHTFLGPVLTPAHAHPHH 507 Query: 525 FHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVM 584 L++L + + +L+ A + Sbjct: 508 MAHSTATMLMILSIAVAAAGIFVSYLFYVKNFPAL-------------PEKTVKTF---- 550 Query: 585 QPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEI 644 +PL + + D L ++ + ++ + + + + Sbjct: 551 KPLHKFLLNKWYFDELYD-FLFVHPIVMISNILWRAFDVNVIDFTVNAFGRVPMWFGGVV 609 Query: 645 QHLQSGDFRLYCLYVVAALVVLLIAI 670 +H+Q+G + Y +V ++V + Sbjct: 610 RHIQTGRIQTYIFTMVIGIIVFVTIF 635 >UniRef50_Q12ZH7 Na+/H+ antiporter subunit n=2 Tax=Methanosarcinaceae RepID=Q12ZH7_METBU Length = 788 Score = 326 bits (835), Expect = 2e-87, Method: Composition-based stats. Identities = 133/577 (23%), Positives = 230/577 (39%), Gaps = 27/577 (4%) Query: 1 MDALQLLTWSLIL-YLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVT 59 MD+ +T ++ L ++FA L + L + + T+L + ++ + + Sbjct: 1 MDSFNAITVAIFLPFIFAGLVPVMEKLLKQRVGWFAAATALASFALIGMAATEVIEGQII 60 Query: 60 LVARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMN 119 + P + T+ D L+ + + S + V+ YS YM E ++ Sbjct: 61 QGSISWIPSAGVNFTIYADGLATMIGFIASGIGVLIMSYSNGYMSRTED--LTRYYQYLL 118 Query: 120 IFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDK-TSINAGMLYFFIAHAGSVLI 178 +F+ SM+ ++ N + +E+ S++S+ L+ + K SI + +G + + Sbjct: 119 LFMGSMIGMVFSGNTIQLFIFWELTSITSFMLIGYWRHKPESIYGATKSLLLTASGGLAM 178 Query: 179 MIAFLLMGRESGSLDFASFRTLSL------SPGLASAVFLLAFFGFGAKAGMMPLHSWLP 232 + FLL+G +GS + A+ L +L G AK+ P + WLP Sbjct: 179 LAGFLLLGNITGSFELAAILNDPQVINAIKEHELFLITLILILIGAAAKSAQGPFYIWLP 238 Query: 233 RAHPAAPSHASA-LMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGV 291 A AP+ SA L S MVK GI+ + ++ W ILV G I+ L+ Sbjct: 239 NAM-EAPTPVSAFLHSATMVKAGIYLVARIHPIFSGTEA----WFILVSGTGIITMLVAG 293 Query: 292 LYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALF 351 A + DIK +LA+ST+ + ++ G +G+ A FHLLNHA F Sbjct: 294 FLAFRQTDIKGILAYSTISQLAYMMTMYG-------YTTHHEPGIGVAAATFHLLNHAAF 346 Query: 352 KGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTW 411 K LFL AG + T D+ K+G L + MP T I LA++ IPPLNGF+S+ + Sbjct: 347 KACLFLVAGIVAHEAATRDIRKLGGLRREMPITFIIACIAGLAMAGIPPLNGFLSKEMFY 406 Query: 412 QSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGA-PRSTHAEEAQEV 470 +S + P + G +K+ F G ++ E Sbjct: 407 ESSIEMGASIGGIFTFLIP---AFAVLGGVFTFAYSIKLIDGIFLGERDKNAIPHHIHEP 463 Query: 471 PNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVT 530 P TM++ LA L +L + S I+ A + A + + Sbjct: 464 PMTMLIPPAFLAFLVILFGVIPSLPTHYIIEPAVSGILLETAHLHVKLWHGFTASLMMTI 523 Query: 531 PSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWA 567 + +L +L+ W + + + Sbjct: 524 VTFILGILIYTKYDRIAAWQDNFNMKNPRISINYYYD 560 >UniRef50_Q2FZV1 Na(+)/H(+) antiporter subunit A1 n=72 Tax=Bacillales RepID=MNHA1_STAA8 Length = 801 Score = 326 bits (835), Expect = 2e-87, Method: Composition-based stats. Identities = 131/574 (22%), Positives = 243/574 (42%), Gaps = 19/574 (3%) Query: 1 MDALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTL 60 M L + +++ L + + ++ + + T V Sbjct: 1 MSLLHIAVILPLIFALIIPILYRFFKRIHLGWFVLPVPIVIFIYMLTLIKTTMSGNTVMK 60 Query: 61 VARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNI 120 + P F + L +D L L+IS + + LYS+ Y+ + E G ++ + Sbjct: 61 TLNWMPHFG-MNFDLYLDGLGLLFSLLISGIGSLVVLYSIGYLSKSEQLGN--FYCYLLL 117 Query: 121 FIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDK-TSINAGMLYFFIAHAGSVLIM 179 F+ +M+ +++ DN + +E+ S SS+ L+ +++ SI I G + ++ Sbjct: 118 FMGAMLGVVLSDNVIILYLFWELTSFSSFLLISFWRERQASIYGAQKSLIITVFGGLSLL 177 Query: 180 IAFLLMGRESGSLDFASFRTLS---LSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHP 236 +L+ + S + + +L G K+ P + WLP A Sbjct: 178 GGIILLAIPTQSFSIQYMIQHASEIQNSPFFIFAMILIMIGAFTKSAQFPFYIWLPDAM- 236 Query: 237 AAPSHASA-LMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYAL 295 AP+ SA L S MVK G++ I ++ A G W V +G I+ L A Sbjct: 237 EAPTPVSAYLHSATMVKAGLYLIARMTPIFAASQG----WVWTVTLVGLITLFWASLNAT 292 Query: 296 AEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLH--DPLLTVVGLLGALFHLLNHALFKG 353 +QD+K +LA+STV +G+I+ +G+ + D + A+FHL+NHA FKG Sbjct: 293 KQQDLKGILAFSTVSQLGMIMAMLGIGAISYHYQGDDSKIYAAAFTAAIFHLINHATFKG 352 Query: 354 LLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQS 413 LF+ GA+ T D++K+G L MP + +I L+++ +PP NGF+S+ ++ Sbjct: 353 ALFMITGAVDHSTGTRDVKKLGGLLTIMPISFTITVITALSMAGVPPFNGFLSKESFLET 412 Query: 414 LFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTH-AEEAQEVPN 472 F+ S+ ++ G + ++ V + +K F G + ++A EV Sbjct: 413 TFTASQANLFSVDTLGYLFPIIGIVGSVFTFVYSIKFIMHIFFGQYKPEQLPKKAHEVSI 472 Query: 473 TMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPS 532 M+++ +LA L ++ L L I+ A + N TV + T S Sbjct: 473 LMLLSPAILATLVIVFGLFPGILTNSIIEPATSSIN---HTVIDDVEFHMFHGLTPAFLS 529 Query: 533 LLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAW 566 L++ +L + L+ + +R + T + W Sbjct: 530 TLVIYILGILLIVTFSYWVKLLQRQPGKLTFNYW 563 >UniRef50_C0Z765 NADH-quinone oxidoreductase chain L n=2 Tax=Bacillales RepID=C0Z765_BREBN Length = 637 Score = 325 bits (833), Expect = 4e-87, Method: Composition-based stats. Identities = 153/676 (22%), Positives = 274/676 (40%), Gaps = 76/676 (11%) Query: 1 MDALQLLTWSLILYLFASLASLFLLGLDRL--AIKLSGITSLVGGVIGIISGITQLHAGV 58 MD L W + L+ + + G A + + V I ++ + G Sbjct: 1 MDTLMHYAWLIPLFPLLAFIVIVSFGRQLKEGAAIVGITLTAVSFGIAVLIFWERFQGGG 60 Query: 59 TLVARFAPPFEFADL----TLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAM 114 T D+ ++ L+A M+++++L+ ++ +YS YM + + Sbjct: 61 TDYNYVIDWLHIGDIVINMGFEVNPLNAMMLVIVTLVSLLVQIYSKGYM--HGDERFPVF 118 Query: 115 GFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDK-TSINAGMLYFFIAHA 173 ++ +F SM+ L++ N + +E++ + S+ LV K + A F + Sbjct: 119 YQYLALFTFSMLGLVISPNLLQVYIFWELVGVCSFLLVGYYYFKNEAKAAAKKAFIVTRI 178 Query: 174 GSVLIMIAFLLMGRESGSLD----FASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHS 229 G + + I L+ +GS + F S L P + + +L F G K+G PLH+ Sbjct: 179 GDLGLFIGICLLFWWTGSFEYGAIFESIALGRLEPWMITLAAILIFIGAMGKSGQFPLHT 238 Query: 230 WLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISAL 288 WLP A P+ SAL + MV G++ + +A +V +G +A+ Sbjct: 239 WLPDAM-EGPTPVSALIHAATMVAAGVYLVAATYPLFIASDTAL----TVVAYVGGFTAI 293 Query: 289 LGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNH 348 L ++DIKR+LA+STV +G +++A+GVA G + FHL+ H Sbjct: 294 FAASIGLTQRDIKRVLAYSTVSQLGYMMMALGVA-----------GAAGYVAGSFHLMTH 342 Query: 349 ALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEW 408 A FK LLFLGAG++I +HT ++ +MG L K+MP TA LIGCLAI+ I P GF S+ Sbjct: 343 AFFKALLFLGAGSVIHAVHTQNVFEMGGLWKKMPITALTFLIGCLAIAGIFPFAGFWSKE 402 Query: 409 YTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQ 468 +++ R + + + + +++ +TF G R H EA Sbjct: 403 AILGAVYGAHRYD----------LLFIALLAAFFTAFYMFRLFFLTFAGKARGKH--EAH 450 Query: 469 EVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQ 528 E P M +L+LA L V+ + AP + + T G G+ H Sbjct: 451 ESPGVMTGPLLVLALLAVVAGFVNTPYAPLLSDWLLSTNTGTAITSIFG----GGSEHAA 506 Query: 529 VTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLR 588 ++ LL+ + ++ +S + W L Sbjct: 507 AWLQIVALLISILGVVLAYLMYGKKSISSDTIPETMPW--------------------LY 546 Query: 589 VVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQ--- 645 + + + + + + +D+ ++ +V T ++ + I Sbjct: 547 QLSYKKYYIDELY------HNVIVRPLGWIGFVLDVFDKYIVDGLVGLTAKITQGIGSLH 600 Query: 646 -HLQSGDFRLYCLYVV 660 +QSG + Y V+ Sbjct: 601 ARVQSGQIQSYGAMVI 616 >UniRef50_Q9XAR5 NADH-quinone oxidoreductase subunit L n=38 Tax=Actinomycetales RepID=NUOL_STRCO Length = 654 Score = 324 bits (832), Expect = 5e-87, Method: Composition-based stats. Identities = 154/701 (21%), Positives = 268/701 (38%), Gaps = 102/701 (14%) Query: 3 ALQLLTWSLILYLFASLASLFL-LGLDRLAIKLSGITSLVGGVIGIISGITQLHAG---- 57 L+ + L ++ L LDR+ + + + V V+G++ L +G Sbjct: 1 MENLIALLVAAPLLGAVVLLCGGRRLDRVGHWIGTLLAAVSFVLGVVLFADLLGSGAEDR 60 Query: 58 --VTLVARFAPPFEF-ADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAM 114 + + P F AD+ R+D LS VL+I+ + + LYS+ YM E + Sbjct: 61 TLTQHLFSWIPVEGFQADVAFRLDQLSMTFVLLITGVGSLIHLYSVAYMEHDERR--RRF 118 Query: 115 GFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSIN-AGMLYFFIAHA 173 ++N+F+A+M+ L++ DN V +E + L+S+ L+ Q K S A F + Sbjct: 119 FGYLNLFLAAMLILVLADNYLLLYVGWEGVGLASYLLIGFWQHKPSAATAAKKAFLVNRV 178 Query: 174 GSVLIMIAFLLMGRESGSLDFASFRTLSLSPGLASAV--------FLLAFFGFGAKAGMM 225 G + + I +LM G+ F GLA+ L+ K+ + Sbjct: 179 GDMGLSIGIMLMFLWFGTFAFGPVLGGHGEAGLAAGADEGKLTAIALMLLLAACGKSAQV 238 Query: 226 PLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGA 284 PL SWL A P+ SAL + MV G++ I++ L +V +GA Sbjct: 239 PLQSWLGDAM-EGPTPVSALIHAATMVTAGVYLIVRSGAIFNGAPDAQL----VVTIVGA 293 Query: 285 ISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFH 344 ++ L G + A+ DIK+ LA ST+ +G ++LA G+ +G + A+ H Sbjct: 294 VTLLFGAIVGCAKDDIKKALAGSTMSQIGYMVLAAGLG------------PIGYVFAIMH 341 Query: 345 LLNHALFKGLLFLGAGAIISRLH-THDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNG 403 L+ H FK LFLGAG+++ ++ DM + G L K MP T +G LAI P L+G Sbjct: 342 LVTHGFFKAGLFLGAGSVMHGMNDEVDMRRYGGLRKYMPVTFVTFGLGYLAIIGFPGLSG 401 Query: 404 FISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPR--- 460 F S+ ++ F+ E G I + + ++ +TF G R Sbjct: 402 FFSKDKIIEAAFAKGGTE-------GWILGACALLGAAITAYYMTRVMLMTFFGEERWRN 454 Query: 461 -------------------STHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMH 501 + E P M + M++LA V Sbjct: 455 APTPSPAKPDVEPAAETRGTYEPPHPHESPGLMTIPMIVLAVGSVGAG------------ 502 Query: 502 IAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRR 561 AF + + + + + + ++ G+ W + R Sbjct: 503 ---AFFSIGDRFMHWLEPITGHSHGDSPISAGAVTGATVACMVIGVAVAWAQYGRRPV-- 557 Query: 562 TGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQST 621 A+AP G+ + + R L + +R + L T Sbjct: 558 ------------PAVAPRGSLLTRAARR---DLLQDDFNHVVLVRGGEHLTRSLVYVDHT 602 Query: 622 EPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAA 662 + V+ ++ L+ ++ LQ+G R Y + + Sbjct: 603 ---VVDGVVNGTAASVGGLSGRMRRLQNGFARSYAVSMFGG 640 >UniRef50_A8GEJ3 NADH dehydrogenase (Quinone) n=2 Tax=Enterobacteriaceae RepID=A8GEJ3_SERP5 Length = 622 Score = 324 bits (831), Expect = 7e-87, Method: Composition-based stats. Identities = 233/572 (40%), Positives = 336/572 (58%), Gaps = 14/572 (2%) Query: 35 SGITSLVGGVIGIISGITQLHAGVTLVARF-APPFEFADLTLRMDSLSAFMVLVISLLVV 93 S +++L+ GV I + T L A L A + + + + L+A ++LV++L V Sbjct: 34 SRVSTLLSGVTLICAIATLLAAVQMLFAPLHSAHLPWLHYAVEISGLNALLLLVMALCGV 93 Query: 94 VCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVI 153 +LY + + + N+ +A++ A ++ DNA ++L E+ +L +FL++ Sbjct: 94 FAALYHAGSLSRLNPRARGRLAGLSNLMLAALSAAVMADNALALLLLLELAALCGYFLIV 153 Query: 154 ARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRTLSLSPGLASAVFLL 213 S+ AG F + +G++L+++AF L+ S SL F+ R L L +AVFLL Sbjct: 154 HAPSAKSLRAGHSQFLLMRSGTLLLVVAFALIYCHSHSLQFSVIRATPLPDALRNAVFLL 213 Query: 214 AFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPL 273 A GFG AG+MPLH+W+P++H +AP+ A+ L S ++K+G+ GILK+ +DLL PL Sbjct: 214 ALAGFGIFAGLMPLHAWVPQSHSSAPASAAMLFSSALMKVGLLGILKIGLDLLGTP--PL 271 Query: 274 WWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLL 333 WWG+LV+ + A +A G LYAL E D++RLLA+ T+EN+GIILL +G AMVG +L PLL Sbjct: 272 WWGLLVLLLAAGTAFFGGLYALMEHDLRRLLAYHTLENIGIILLGIGGAMVGTALQQPLL 331 Query: 334 TVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCL 393 T L+G LFHLLNH+LFK L L AGAI + DMEKMG LA+ MPWTA + LIG + Sbjct: 332 TAFALIGGLFHLLNHSLFKSALLLAAGAIEQQTGLKDMEKMGGLARLMPWTAVSLLIGLV 391 Query: 394 AISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGI 453 A++A+PPLNGF SEW +Q LF S L GP+ V LA+TG LAVMC K++G+ Sbjct: 392 AMAALPPLNGFASEWLIYQGLFHFSAAPGFIGHLFGPLLAVALALTGALAVMCVSKVFGV 451 Query: 454 TFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPAT 513 F GAPR A A + M ++ L A LC++ L A W+ P + + Sbjct: 452 AFLGAPRCDAAANAVQANVWMTLSHALPALLCLVCGLGAPWIIPLFARLIGLTSEQ---- 507 Query: 514 VASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWE 573 T V+ L+ +LLLAMPLLP L ++RR R G AWACGYG E Sbjct: 508 -------TLSLSDTLVSTPLIAILLLAMPLLPLLIAARYQTRRQPRRVQGSAWACGYGHE 560 Query: 574 NAMAPSGNGVMQPLRVVFSALFRLRQQLDPTL 605 +AM + G QPLRV+F+ L++LR+ L + Sbjct: 561 DAMVITATGFAQPLRVMFAPLYQLRRWLPGSF 592 >UniRef50_Q1H3T5 NADH dehydrogenase (Quinone) n=12 Tax=Proteobacteria RepID=Q1H3T5_METFK Length = 966 Score = 323 bits (829), Expect = 1e-86, Method: Composition-based stats. Identities = 124/537 (23%), Positives = 230/537 (42%), Gaps = 33/537 (6%) Query: 13 LYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGII---SGITQLHAGVTLVARFAPPFE 69 L L + ++F RL S +++ ++ + Q G T++ R P Sbjct: 6 LTLIPFIGAIFTKLSTRLGRYSSAWVAILSAMLSLFLLWPLAMQAWQGNTVIQRITPWMP 65 Query: 70 FADLT--LRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVA 127 ++ R+D LS L+I L+ ++ +Y+ Y+ + G ++ +F+ SM+ Sbjct: 66 ELGISLAFRLDGLSLLFSLMILLVGLIVVIYARYYLSPRDSMG--RFYSYLLLFMGSMLG 123 Query: 128 LLVMDNAFWFIVLFEMMSLSSWFLVIAR-QDKTSINAGMLYFFIAHAGSVLIMIAFLLMG 186 +++ +N ++ +E+ SLSS+ L+ Q + + + I G + ++ FLL+G Sbjct: 124 VVLSENIIQLLMFWELTSLSSFLLISYWQQREEASRGARMALTITGGGGLAMLGGFLLLG 183 Query: 187 RESGSLDFASF---RTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHAS 243 +GS D + S + LL G K+ P H WLP A AAP+ S Sbjct: 184 NMAGSYDLSDILLAGDAIRSHEHYPLMLLLILLGVFTKSAQFPFHFWLPNAM-AAPTPVS 242 Query: 244 A-LMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKR 302 A L S MVK GIF + + L W +V +G + + G AL + D+K Sbjct: 243 AYLHSATMVKAGIFLLAR----LFPALSGTPEWTWIVSGVGIATFVTGSYIALFKHDMKA 298 Query: 303 LLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAI 362 LLA+ST+ ++G+I+ G+ T + ++ +FH++NHA FK LF+ AG + Sbjct: 299 LLAYSTISHLGLIVALFGIG-----------TPLAVVAGIFHIINHATFKASLFMLAGIV 347 Query: 363 ISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEA 422 T D+ +G L + MP++A +I A++ IP LNGFIS+ + + Sbjct: 348 DHETGTRDIRHLGGLRRYMPYSAVLMVIAAAAMAGIPGLNGFISKEMFLDQIVAHGNTFP 407 Query: 423 VALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLA 482 + ++ + +++ F G+ + + + M + + +L Sbjct: 408 -----HQWLLPAIVTAGAVFSAAYSIRIAHSVFFGSEPDDLPKAPHDPSSGMQIPVAILV 462 Query: 483 ALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLL 539 A CV + + + P + + + T P I +L +L+ Sbjct: 463 AACVAVGVLPAIAEPLVTLVTASTLQTAPPAFHLAIWHGLTPALWMSAIALAGGILV 519 >UniRef50_B3QY40 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QY40_CHLT3 Length = 772 Score = 323 bits (827), Expect = 2e-86, Method: Composition-based stats. Identities = 125/529 (23%), Positives = 220/529 (41%), Gaps = 74/529 (13%) Query: 5 QLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARF 64 L+ +S+I L L+ FL+ + + + G++GI ++ + + Sbjct: 4 TLIQFSIITLLLPLLSFTFLIFFNGKLPRKGDFVGV--GLVGISLALSLYIFTSVVFGEY 61 Query: 65 APPFEFA-------------------DLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMRE 105 P F+ + + +D+L+A M++V++L+ + ++S+ YM Sbjct: 62 DPNFKVGWSFTWLDFGNVPGVGPLTISMGILIDNLTAIMLVVVTLISFLVHIFSMGYMAG 121 Query: 106 YEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDK-TSINAG 164 K ++ IF SM+ +++ DN F + +E++ LSS+ L+ +K ++ +A Sbjct: 122 --DKYYGRYYAYLGIFTFSMLGIVLSDNLFSIYIFWELVGLSSYLLIGFFFEKDSAADAQ 179 Query: 165 MLYFFIAHAGSVLIMIAFLLMGRESGSLDFASF------RTLSLSPGLASAVFLLAFFGF 218 F G + + + L++ + + + +LS +A LL F G Sbjct: 180 KKAFLTNRVGDIGMWLGILILYSQFHTFGYEEIYQNIQDGNFTLSEAWLTAGGLLLFMGC 239 Query: 219 GAKAGMMPLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGI 277 K+ PLH WLP A P+ SAL + MV G++ + ++ L + Sbjct: 240 VGKSAQFPLHIWLPDAM-EGPTPVSALIHAATMVAAGVYFVARIFPIL------SVDALH 292 Query: 278 LVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVG 337 ++ IGA +A + A+ + DIKR+LA+ST+ +G +++ +G+ Sbjct: 293 VIAFIGAFTAFMAATIAITQHDIKRVLAYSTLSQLGYMVMGMGIG--------------A 338 Query: 338 LLGALFHLLNHALFKGLLFLGAGAIISRLH-THDMEKMGALAKRMPWTAAACLIGCLAIS 396 A FHL+ HA FK LFLG+GA+I H DM MG L K MPWT A I LA+S Sbjct: 339 YAPAFFHLVTHAFFKACLFLGSGAVIHATHHEQDMRWMGGLRKNMPWTFATFTIAMLALS 398 Query: 397 AIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFC 456 +P +GF+S+ + VE L L + + F Sbjct: 399 GLPMTSGFMSKDAILAGSLGFANVEGGFYYLIPVFGFG----AAMLTAFYMGRQMWLVFF 454 Query: 457 GAPRSTHAEE-----------------AQEVPNTMIVAMLLLAALCVLI 488 G R+ +V M +++LA L V Sbjct: 455 GENRAHLKPASHDDHHHGHDDHHGHHSVHDVDWVMRFPLVVLATLSVFF 503 >UniRef50_Q2S2L2 NADH dehydrogenase I, L subunit n=3 Tax=Rhodothermaceae RepID=Q2S2L2_SALRD Length = 665 Score = 322 bits (826), Expect = 2e-86, Method: Composition-based stats. Identities = 147/645 (22%), Positives = 258/645 (40%), Gaps = 68/645 (10%) Query: 38 TSLVGGVIGIISGITQLHAGVTLVARFAPPFEFADLTL----RMDSLSAFMVLVISLLVV 93 T++V + + G +VA + DL L R+D LS M V++ + Sbjct: 43 TAVVAIPFVLTVYLFVTFGGDPIVADYFTWMAAGDLDLSFAYRIDQLSLLMTGVVTGVGG 102 Query: 94 VCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVI 153 V LYS+ YM + G ++N+FI +M+ L++ +N + +E + L S+ L+ Sbjct: 103 VIHLYSIGYM--HGDAGYWRFFAYLNLFIFAMLNLVLANNLPVLFLGWEGVGLCSYLLIG 160 Query: 154 ARQDK-TSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRTLS--LSPGLASAV 210 ++ A F + G ++A L+ ++ GSL F T L + + Sbjct: 161 FWYTDLSNSAAANKAFIVNRVGDFAFLVAMFLVFQQLGSLSFDVLLTEGPNLPEATLNWI 220 Query: 211 FLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQT 269 L F G K+ +PL WLP A A P+ SAL + MV G++ + +++ +L Sbjct: 221 VFLLFVGATGKSAQIPLFVWLPDAM-AGPTPVSALIHAATMVTSGLYLLARLSALVLGAP 279 Query: 270 GLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLH 329 + + ++ +GA +AL+ A+A+ DIKR+LA+STV +G + +A GV Sbjct: 280 VVMM----IIAIVGAATALMAATIAIAQDDIKRVLAYSTVSQLGYMFMAAGVG------- 328 Query: 330 DPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHT-----------------HDME 372 ++FH++ HA FK LFLG+G++I + DM Sbjct: 329 -------AFFVSIFHVITHAFFKACLFLGSGSVIHGMEEVEHGLEEQGRDTSDFDPQDMR 381 Query: 373 KMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIA 432 MG + + MP T L+ LAIS IP GF S+ F + + Sbjct: 382 TMGGVGEYMPATRTTYLLATLAISGIPLTAGFFSKDEILFKAFEYGYDGSTYAMAVWIVG 441 Query: 433 MVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEE--AQEVPNTMIVAMLLLAALCVLIAL 490 +V T L ++ Y +TF G PR ++ E P+TM + L L ++ Sbjct: 442 VV----TAVLTAFYMMRSYMLTFEGEPRWPLPDQLSPHESPSTMTGPLWTLGILSLVGGF 497 Query: 491 SASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWL 550 A + + A +A H + L+LL ++ L +Y+ Sbjct: 498 I-GLPAVIQGGDLNWIHHYLGAKYGGPVAEASVHGHVPLALEWGLILLSSVIALGTVYYA 556 Query: 551 WCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKG 610 W G ++ A+ GV Q S + + D + + Sbjct: 557 WRVYGTQ-----------GLEYDAALQRQLRGVYQTW----SDKYYWDEFYDEVVVDSLI 601 Query: 611 LAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLY 655 + + + + + A Q + ++ +Q+G + Y Sbjct: 602 NGIARKGLAAFDTTVVDGAVNGVAGAAQNASGLLRRVQTGLVQNY 646 >UniRef50_Q1AVJ0 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AVJ0_RUBXD Length = 656 Score = 321 bits (823), Expect = 5e-86, Method: Composition-based stats. Identities = 160/682 (23%), Positives = 275/682 (40%), Gaps = 70/682 (10%) Query: 4 LQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVAR 63 QL+ ++ + L L G RL + + ++ G V ++ L+ + Sbjct: 6 QQLVIAAIPVIPLVVFFVLALFG--RLLRENAQYVAIFGMVFSVVFSFFALYLVIRDGRP 63 Query: 64 FAPPFEFAD--------LTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMG 115 + + + + +D L+A M++V+S + ++ LYS +M + A Sbjct: 64 LEFSVYWINLGEGGGFPIGVYIDELAAVMLVVVSFVSLMIQLYSGGFMAG--DRRFAWYY 121 Query: 116 FFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSIN-AGMLYFFIAHAG 174 +N+F ASM+ L+V N + +E++ L S+ L+ +K + A + F + G Sbjct: 122 AVLNLFTASMLGLVVAPNFIELYICWELVGLCSYLLIGHWFEKPAARDAALKAFIVTRIG 181 Query: 175 SVLIMIAFLLMGRESGSLDFASFRTLS----LSPGLASAVFLLAFFGFGAKAGMMPLHSW 230 + + ++ R +G+ F + + L +A +L F G K+ PLH W Sbjct: 182 DAALFVGIIMFWRATGTTAFEGIAEAAQAGFIGGSLLTAAVVLVFVGAIGKSAQFPLHVW 241 Query: 231 LPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALL 289 LP A P+ SAL + MV G++ + + + L +V IGA +A + Sbjct: 242 LPDAM-EGPTPVSALIHAATMVAAGVYLVARTYDIFVQSPTAML----IVAYIGAFTAFM 296 Query: 290 GVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHA 349 AL ++DIKR++A+STV +G ++L +GV +FHL NHA Sbjct: 297 AATMALVKKDIKRVIAYSTVSQLGYMMLGLGVG--------------AFSAGMFHLYNHA 342 Query: 350 LFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWY 409 FK LLFL AG+II + ++++ +MG L +RMP T +I L+++ I PL GF S+ Sbjct: 343 FFKALLFLCAGSIIHAMDSYNLFEMGGLRRRMPLTFWTMVIAGLSLAGIFPLAGFWSKDA 402 Query: 410 TWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQE 469 S F + + T L + + F G PR+ A A E Sbjct: 403 IIASAFEEHY----------YVLYALAIGTVFLTAFYIFRAIFLAFTGEPRTEGAARAVE 452 Query: 470 VPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQV 529 P M V M++LA L V + +V Sbjct: 453 SPGVMTVPMVILAVLSVASG--------WVGIPEGFGLPVRDYFGGFVAPSGFARETLEV 504 Query: 530 TPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRV 589 P LL A+ +L GL + G A+A Y A+AP+ + L Sbjct: 505 EPHGFSFLLAAISVLVGLAGI------------GLAYAM-YVARPALAPAMARRLFGLHT 551 Query: 590 VFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQS 649 + T + E ++ I T RL + ++ +Q+ Sbjct: 552 FLDKGWYFDALYGATFVRAAFAVGRAVQGFDREVL--GGLVGGIARGTGRLGEALRRVQT 609 Query: 650 GDFRLYCLYVVAALVVLLIAIA 671 G + Y L++V +++VL I Sbjct: 610 GRVQNYALFIVVSVLVLAIVAG 631 >UniRef50_A6TVL5 NADH dehydrogenase (Quinone) n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TVL5_ALKMQ Length = 498 Score = 321 bits (823), Expect = 6e-86, Method: Composition-based stats. Identities = 116/456 (25%), Positives = 211/456 (46%), Gaps = 29/456 (6%) Query: 59 TLVARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREY-EGKGAAAMGFF 117 + F + +D SA M LV+ + + +YSL + + + Sbjct: 59 SFTYTFGQWNPTIGIEFVVDEFSALMTLVVLSVATLIIIYSLKDIEHEILKEQFFSYYTL 118 Query: 118 MNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVL 177 + + + SM+ ++ ++ F V E++SL+S ++ ++ K ++ A Y + GSV Sbjct: 119 IFLLLFSMIGMIFTNDLFNLYVFMEILSLTSCGIISIKRKKENLMASFKYLMLGAIGSVS 178 Query: 178 IMIAFLLMGRESGSLDFASFRTLSLS-----PGLASAVFLLAFFGFGAKAGMMPLHSWLP 232 I++ L+ +G L+ + + P GFG KA + PLH WLP Sbjct: 179 ILMGIALLYMVTGHLNMTAAYEVITQVWQSYPRNILIALGFILTGFGIKAAIFPLHIWLP 238 Query: 233 RAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGL-PLWWGILVMAIGAISALLGV 291 AH AP+ +SAL+SG++VK+ +F I K+ +L Q + + + +S ++G Sbjct: 239 DAHSNAPTPSSALLSGLVVKVYVFAIAKILFRVLGQDIVQSIGVTEFITYFAVLSMIMGS 298 Query: 292 LYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALF 351 ++A+ + DIKRLLA+S+V +G I L +G+A T +G LFH++ HAL Sbjct: 299 VFAIGQTDIKRLLAYSSVAQIGYIFLGLGLA-----------TELGFSAGLFHVITHALM 347 Query: 352 KGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTW 411 K LFL AGAII + D+ + + +MP T + L + IP LNGF+S+WY Sbjct: 348 KSALFLSAGAIIYQTGKRDIRDLDGIGYQMPITMGVFSVAALGMIGIPGLNGFMSKWYLS 407 Query: 412 QSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRS-THAEEAQEV 470 ++ + P+ ++M+ ++ L + ++ + F + + Sbjct: 408 LAVLEADK----------PVFLIMILISSFLNAIYYLPIIIAAFLKESNERDNVMVLDRL 457 Query: 471 PNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAF 506 P TM+ M+++A CV++ + + F Sbjct: 458 PKTMMYPMVIIAIGCVVMGFFPHIVMDVVERAVPTF 493 >UniRef50_Q8M9U5 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic n=5 Tax=Viridiplantae RepID=NU5C_CHAGL Length = 670 Score = 321 bits (822), Expect = 8e-86, Method: Composition-based stats. Identities = 143/664 (21%), Positives = 253/664 (38%), Gaps = 77/664 (11%) Query: 24 LLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVT---LVARFAPPFEFADLTLRMDSL 80 L + +S + ++ ++ QL + L + D+ +D L Sbjct: 33 FRNLRKFVGSMSIAFMFLTLILSLLFFNDQLSESYSYRFLFPWLSTKNLTLDIGYLIDPL 92 Query: 81 SAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVL 140 ++ M+++++ + V +YS YM +G ++++F ASM+ L+V N V Sbjct: 93 TSIMLVLVTSVAVTVMIYSDGYMLHDQG--YIRFFAYLSLFTASMLGLIVSPNLIQVYVF 150 Query: 141 FEMMSLSSWFLVIARQDKT-SINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRT 199 +E++ + S+ LV + + +A F G +++ L +GS F + Sbjct: 151 WELIGMCSYLLVGFWSTRPTAASACQKAFITNRVGDFGLLLGILGFYWLTGSFQFDIIQD 210 Query: 200 LSLSPGLASAVF--------LLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASAL-MSGVM 250 L + + +L F G AK+ PLH WLP A P+ SAL + M Sbjct: 211 RLNELLLTNNLNFTLFIISSVLLFLGPIAKSAQFPLHIWLPDAM-EGPTPISALIHAATM 269 Query: 251 VKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVE 310 V GIF + + LL L IL+ GAI+ALLG A+A+ D+KR LA+ST+ Sbjct: 270 VAAGIFLVAR----LLPIFQLSPLLMILIAFTGAITALLGACLAVAQTDLKRGLAYSTMS 325 Query: 311 NVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRL---- 366 +G ++L +G+ G A+FHL+ HA K LLFLG+G++I + Sbjct: 326 QLGYMMLGLGIG--------------GYQAAIFHLITHAYSKALLFLGSGSVIHSMEPVV 371 Query: 367 -----HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVE 421 + +++ MG L K MP T LIG L++ IPP F S+ F Sbjct: 372 GYDPNKSQNIDYMGGLRKYMPITGVTFLIGTLSLCGIPPFACFWSKDEIIADAF------ 425 Query: 422 AVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPR------STHAEEAQEVPNTMI 475 P+ + +T GL ++Y +TF G R S+ E E +M Sbjct: 426 -----FHLPLLGFIAWLTAGLTGFYMFRLYLLTFEGEFRAHKNLKSSSLEYPHESSFSMT 480 Query: 476 VAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLL 535 + ++LL + I L + I +T + + T + + Sbjct: 481 LPLILLMFPTIFIGFLG--LPYNLGFIQSQILSTWLVGPSIDLNSSSNWIDFFKTSATSV 538 Query: 536 LLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALF 595 + L + + F + + G + F Sbjct: 539 GIAFLGICFSFLLYSPKNASNRDFNQISNPV-------------PKGFLSSYVKSFYNWS 585 Query: 596 RLRQQLDPTLRLN--KGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFR 653 R +D L K + ++ + + + T + +++ ++G Sbjct: 586 LNRAYIDKFYELTWIKWCGIFAQFTSYLDRWFFDGFVNGVGLLTLISGEALRYGENGKVS 645 Query: 654 LYCL 657 Y Sbjct: 646 SYLF 649 >UniRef50_B5EN60 Proton-translocating NADH-quinone oxidoreductase, chain L n=25 Tax=Proteobacteria RepID=B5EN60_ACIF5 Length = 660 Score = 320 bits (820), Expect = 1e-85, Method: Composition-based stats. Identities = 154/693 (22%), Positives = 266/693 (38%), Gaps = 70/693 (10%) Query: 3 ALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVA 62 L + + L +L + F R + I + ++ + Q G+T Sbjct: 12 PLAVYLVIPVAPLVGALVAGFWGWRLRDHAHWAPIIGVAIAFYLSLAVLWQTGHGITFYG 71 Query: 63 RFAPPFEFADL----TLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFM 118 L +DSL+A M++V++ + + LY++ YM + G A ++ Sbjct: 72 DVYTWAVLGHLPVSVGFDIDSLTALMLVVVTFVSLSVHLYTVGYM--HGDPGYARFFSYI 129 Query: 119 NIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSIN-AGMLYFFIAHAGSVL 177 +F SM+ L++ +N +E + L S+ L+ + S N A + F + G Sbjct: 130 ALFTFSMIMLVMSNNFLQLFFGWEAVGLVSYLLIGFWFQRESANVAAIKAFIVNRVGDFG 189 Query: 178 IMIAFLLMGRESGSLDFASF---------RTLSLSPG----LASAVFLLAFFGFGAKAGM 224 +I + GSLD+ + +TL + PG + + + LL F G K+ Sbjct: 190 FLIGIAAVYHYCGSLDYRTVFAAVPHLIGQTLEIIPGHPWSVLTWIALLLFVGAMGKSAQ 249 Query: 225 MPLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIG 283 +PLH WLP + P+ SAL + MV GIF + +++ +V+ IG Sbjct: 250 VPLHVWLPESM-EGPTPISALIHAATMVTAGIFMVARMSPIF----EQSATALSVVLIIG 304 Query: 284 AISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALF 343 A++A L L + DIKR++A+ST+ +G + A+G + A+F Sbjct: 305 AVTAFFMGLVGLVQNDIKRIIAYSTISQLGYMTAALGAS--------------AFSAAIF 350 Query: 344 HLLNHALFKGLLFLGAGAIISRL-HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLN 402 HL+ HA FK LLFL AG++I + + D+ KMG L K MP T LIG L++S IPP Sbjct: 351 HLMTHAFFKALLFLAAGSVIHAMSNEQDIRKMGGLRKVMPITYITFLIGSLSLSGIPPFA 410 Query: 403 GFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRST 462 GF S+ +++ ++ A ML + + +M+ + F GAPR Sbjct: 411 GFFSKDLIIEAV-------GLSTLPGAGWAEWMLVAGAFVTALYTFRMFFLVFHGAPRMD 463 Query: 463 H--AEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIAL 520 E P + V ++ LA V I + VA Sbjct: 464 AHTRAHLHESPWVITVPLIALAIPAVYAG------WAYIGPVGLGHFLDSSLVVAPQWNT 517 Query: 521 VPGT-FHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPS 579 + H Q + +L + +P L + AW Y + + Sbjct: 518 IGEIRAHWQGAGAFVLHSVETVPFWLALLGIAV-----------AAWF--YWLRPGLPEA 564 Query: 580 GNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQR 639 + P+ + L E D ++ + Sbjct: 565 LTRFLSPIVWALQRKYGFDAFNQTVLVRGVLQLGALFWHVGDERLIDGIMVNGTAREIGK 624 Query: 640 LAKEIQHLQSGDFRLYCLYVVAALVVLLIAIAV 672 A + +Q+G Y ++ L++L+ V Sbjct: 625 AALSWRRVQTGYIYHYAFAMIIGLILLMSYFVV 657 >UniRef50_C5NVG1 Na(+)/H(+) antiporter subunit A n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NVG1_9BACL Length = 788 Score = 319 bits (819), Expect = 2e-85, Method: Composition-based stats. Identities = 124/551 (22%), Positives = 248/551 (45%), Gaps = 26/551 (4%) Query: 10 SLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISG-----ITQLHAGVTLVARF 64 L L +F + ++F + R K V V I+ G + +++G T+ + Sbjct: 1 MLQLAVFLPVIAMFFVPFFRKNFKTIHTGKFVIVVPLILFGYFISNLKYIYSGGTIYKKL 60 Query: 65 APPFEFA-DLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIA 123 A D+ L +D LS L+I+ + + LYS YM + K F+ IF++ Sbjct: 61 AFVSNVGLDINLNLDGLSLLFSLLITGIGTLVILYSCYYMSITDEK-LHKFYIFLLIFMS 119 Query: 124 SMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQD-KTSINAGMLYFFIAHAGSVLIMIAF 182 +M+ +++ DN + +EM S+SS+ L+ + S + I G VL++ Sbjct: 120 AMLGVVLSDNMLSMYMFWEMTSVSSFLLISYWHENDASRKGALKSLIITVFGGVLMLAGI 179 Query: 183 LLMGRESGSLDFASFRTLSLSPGL---ASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAP 239 ++ +GS + + + + G +L FG K+ P H WLP A A Sbjct: 180 FILNNITGSFNVSEIIEFTKNHGYNDKYVVAMILIIFGAFTKSAQFPFHIWLPDAMAAPT 239 Query: 240 SHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQD 299 +S L S MVK GI+ +L++ + +G +++ G I+ L+G + A+ +D Sbjct: 240 PISSYLHSATMVKAGIYLLLRIGIVF----SFTSSFGNILIIFGTITMLIGSISAIFLKD 295 Query: 300 IKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGA 359 +K +LA+ST+ +G++ L +G+A +GL + + FH++NHA FK LF+ Sbjct: 296 LKGILAYSTISQLGMMTLMIGIANLGLYNDNHYVYTFAFYAVCFHIINHAAFKASLFMIT 355 Query: 360 GAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSR 419 G I H+ D+EK+ + + MP + +I +++ IPPL+GF S+ Y ++ L++ Sbjct: 356 GIIDHSFHSRDIEKLRGIKRYMPLSFILSIIAGFSMAGIPPLSGFYSKEYFLTVVYGLTQ 415 Query: 420 VEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRST--HAEEAQEVPNTMIVA 477 + + I ++ + + + + + F G ++ ++ N + ++ Sbjct: 416 SSMLYM-----IIVIAVVIGALGTAIYSLIVAFKPFLGKFDNSILGNKKLHLPSNGIFIS 470 Query: 478 MLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLL 537 ++L V+ + +++ I+ A T I V + +++ Sbjct: 471 PIIL----VVFVIINTFIKDYIVIPAQQSALAVKITNNEVITHVHHDSFFSIELLTSIIV 526 Query: 538 LLAMPLLPGLY 548 ++A ++ L+ Sbjct: 527 IIASFVIYKLF 537 >UniRef50_Q02CT3 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q02CT3_SOLUE Length = 624 Score = 319 bits (819), Expect = 2e-85, Method: Composition-based stats. Identities = 147/686 (21%), Positives = 263/686 (38%), Gaps = 91/686 (13%) Query: 8 TWSLILYLFASLAS--LFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVAR-- 63 W + ++ A LF + + + S+V + ++ I+ + T Sbjct: 3 LWLIPIFPLAGFLINGLFGRKFSKSLVSTVAVGSVVLSFLWVLKTISAMGDLNTPHLEHY 62 Query: 64 ---------FAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGK---GA 111 +P F +D L+ M+LV++ + + +YS+ YM G G Sbjct: 63 FTWIQSGFPGSPNFVNIGCDFLVDRLTIVMLLVVTGIGSLIHIYSIGYMAHEHGPNFGGF 122 Query: 112 AAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKT-SINAGMLYFFI 170 ++N+F+ M+ L++ N V +E + L S+ L+ DK + NAG F + Sbjct: 123 YRFFAYLNLFMFFMLVLVLGANYLLLFVGWEGVGLCSYLLIGFYFDKKFATNAGNKAFIV 182 Query: 171 AHAGSVLIMIAFLLMGRESGSLDFASF--RTLSLSPGLASAVFLLAFFGFGAKAGMMPLH 228 G +A L+ GSLDFA + + + + LL G K+ +PL+ Sbjct: 183 NRIGDFGFSLAMFLIFHHFGSLDFAEVFHKAPGGTEATLTTICLLLLVGACGKSAQIPLY 242 Query: 229 SWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISA 287 WLP A A P+ SAL + MV G++ + + G ++ IG +A Sbjct: 243 VWLPDAM-AGPTPVSALIHAATMVTAGVYMTARSWVLFTHAPGAMD----VMAIIGIATA 297 Query: 288 LLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLN 347 + LA+ DIK++ A+STV +G + + VG ++HL+ Sbjct: 298 FMAATIGLAQNDIKKVFAYSTVSQLGYMFVGVGSG--------------AFSAGVWHLVT 343 Query: 348 HALFKGLLFLGAGAIISRL-HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFIS 406 HA FK LLFLGAG++I L DM MG L K++P T +AIS IPP +GF S Sbjct: 344 HAFFKALLFLGAGSVIHSLSGEQDMRNMGGLRKKIPITFWTMACAWVAISGIPPFSGFFS 403 Query: 407 EWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEE 466 + + + S + +T L + +TF G R Sbjct: 404 KDAILVAAYQHSHA-----------IYWIGVITAELTAFYVSRAMFMTFFGEYRGK--AH 450 Query: 467 AQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFH 526 E P M + +LA L ++ + + P+ + + Sbjct: 451 PHESPAVMWAPLAVLAVLSLIGGMV--FNIPEFLKA------------------MFPAME 490 Query: 527 TQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQP 586 P L+ + + L L WL + N P Sbjct: 491 EVDNPMLMYISIAFGFLGIALAWLMYVVKPGLADSL-----------------ANMFKAP 533 Query: 587 LRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQH 646 +++++ + + + D T+ + + + ++ + + ++ + ++ Sbjct: 534 YQLIYNK-YFVDEIYDATVVKPVVAGSRVVLWKGVDAGLIDGIVNGVGARSRDVGSVLRL 592 Query: 647 LQSGDFRLYCLYVVAALVVLLIAIAV 672 LQSG R Y +V+ V L++AI + Sbjct: 593 LQSGSIRSYATWVLFGSVALIVAITL 618 >UniRef50_C6W0W0 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W0W0_DYAFD Length = 658 Score = 319 bits (818), Expect = 2e-85, Method: Composition-based stats. Identities = 157/693 (22%), Positives = 277/693 (39%), Gaps = 63/693 (9%) Query: 2 DALQLLTWSLILYLFASLASLFLLG--LDRLAIKLSGITSLVGGVIGIISGITQLHAGVT 59 A L + L+ F+ L+L G L++ A + + ++ G +I I L + Sbjct: 4 TAYHLPAYLLLGLPFSCFLLLWLGGTSLNKYAGWIGALVTVAGLLISFTY-IPNLGIPYS 62 Query: 60 LVARFAPPFE----FADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMG 115 L+ P F + DL+LR D+LS M++++ + ++ LYS YM + + Sbjct: 63 LLQVPLPWFAVGERYIDLSLRFDTLSTLMLVIVHFVALLVQLYSTAYM--HADRNVNRYF 120 Query: 116 FFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTS-INAGMLYFFIAHAG 174 F+ +F+ SM+ +++ N + +E++ LSS+ L+ K + A F + G Sbjct: 121 AFIQLFLFSMLGIVLASNLLMMYIFWELVGLSSYLLIGFWYTKKRPVWAAQKAFVLNRIG 180 Query: 175 SVLIMIAFLLMGRESGSLDFA--SFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLP 232 + L++ G D + ++ G+ + + + F G K+ PL WLP Sbjct: 181 DAAFLTGILMLFYYVGVTDLEVLALEIGTIPQGILTVIGICLFGGCVGKSAQFPLSGWLP 240 Query: 233 RAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGV 291 A P+ SAL + MV GIF + +++ L L +++ IGAI+ ++G Sbjct: 241 DAM-EGPTPVSALIHAATMVAAGIFLLARISFLLTVDARL------VILVIGAITMVIGA 293 Query: 292 LYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALF 351 + AL DIK++LA+ST+ +G++++AVG A+FHL HA F Sbjct: 294 VKALNGWDIKKVLAYSTMSQLGLMVMAVGFG--------------SWQTAMFHLATHAFF 339 Query: 352 KGLLFLGAGAIISRL-----HT--------HDMEKMGALAKRMPWTAAACLIGCLAISAI 398 K LFL AG++I + HT DM MG L K +P T I A++ + Sbjct: 340 KAGLFLSAGSVIHAVTPHEEHTGAEPQFDPQDMRTMGGLRKALPITFICFSICAAALAGL 399 Query: 399 PPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGA 458 P +GF+S+ F + A G + V++ ++ GL + + F G Sbjct: 400 PFFSGFLSKDAIITEGF----LWASEFGALGYLFPVLVVLSAGLTAFYMTRQVWLIFFGN 455 Query: 459 PRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGI 518 R A E P M + M LL+AL V W + + F + Sbjct: 456 ERFPAAVHPHESPVAMWLPMALLSALSVFC-----WFSINPFNAEGWFLQWIGQEHGEHL 510 Query: 519 ALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAP 578 VP S+ L P A W GY E+ Sbjct: 511 IWVPFVASAFTFVSIFLAYRETGSANPFKVNDPIPVGEPAQSPWN--WLRGYSNEHYFLI 568 Query: 579 SGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQ 638 + + L+V + L KG + + + + V + + Sbjct: 569 PFEYITKYLKVFEKNVVDALVDLVA-----KGSLVFGHLIAWFDRTFIDGAVNLTVFSIR 623 Query: 639 RLAKEIQHLQSGDFRLYCLYVVAALVVLLIAIA 671 + +++Q G + Y + V + +L++ + Sbjct: 624 SAGQAARNMQGGRIQSYYIVTVMGIFLLILWLV 656 >UniRef50_C6D5D4 Proton-translocating NADH-quinone oxidoreductase, chain L n=82 Tax=Bacillales RepID=C6D5D4_PAESJ Length = 625 Score = 319 bits (818), Expect = 2e-85, Method: Composition-based stats. Identities = 148/689 (21%), Positives = 277/689 (40%), Gaps = 87/689 (12%) Query: 1 MDALQLLTWSLILYLFASLASLFLLGLD--RLAIKLSGITSLVGGVIGIISGITQLHAGV 58 MD L W + L+ FAS L LG + + I SL V+ ++ I +L Sbjct: 1 MDQLTKAAWLIPLFPFASFLLLTALGRSYRLAGVLIGSIGSLASLVMSLLVFIERLGPNA 60 Query: 59 TLVARFAPPFEFAD-----LTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAA 113 + + + + + +L+A M+++++++ + ++YS YM++ E Sbjct: 61 VDYSGDSYKWIGLGEYTLKIGFEITNLNALMLVIVTVVSFLVNVYSAGYMKKDE--RITV 118 Query: 114 MGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLY-FFIAH 172 ++ +F +M+ L++ DN F + +E++ + S+ LV K + A F + Sbjct: 119 FYGYVALFTFAMLGLVLSDNMLVFYMFWELVGVCSFLLVGFWYAKPAARAAAKKAFIVTR 178 Query: 173 AGSVLIMIAFLLM--GRESGSLDFASFRTL-------SLSPGLASAVFLLAFFGFGAKAG 223 G +++ +++ +LDF+S + +++ + +++ LL F G K+G Sbjct: 179 IGDAGLLLGIIVLFWYMPGHALDFSSIHNVFTEGQSGTITMTITTSIALLLFMGVIGKSG 238 Query: 224 MMPLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAI 282 PLH WLP A P+ SAL + MV G+F + + A V Sbjct: 239 QFPLHVWLPDAM-EGPTPISALIHAATMVAAGVFLLARTFDIFEASASAMH----TVAYF 293 Query: 283 GAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGAL 342 G +A+ ALA+ DIKR+LA+ST+ +G +++A+G+ + G + Sbjct: 294 GGFTAIFAATVALAQNDIKRILAYSTISQLGYMVMAMGLG--------------SMTGGV 339 Query: 343 FHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLN 402 FHL HA FK LLFL AG++I +HT ++ +MG L +M TA IG L++S IPP + Sbjct: 340 FHLFTHAFFKALLFLAAGSVIHAVHTQNIHEMGGLGSKMRITAWTFAIGALSLSGIPPFS 399 Query: 403 GFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRST 462 GF S+ S + P + + +++ I F G R Sbjct: 400 GFWSKDAILASALDEN-----------PFLFAVGLAAAFCTALYMSRLFFIVFMGKSRLQ 448 Query: 463 HAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVP 522 E +E M + +L+LA + V P G L Sbjct: 449 QPAEVKESSKVMTIPLLVLAVISVGAGFI-----------------ETPWNGWLGSWLTD 491 Query: 523 GTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNG 582 G + + ++ + L + WL YG + + Sbjct: 492 GAEEVHASGAAIVASIAVGVLGIYVGWLM------------------YGKGSIERGAAAA 533 Query: 583 VMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAK 642 M L + + + + + + + + + + + +R + + Sbjct: 534 KMPWLVNLLERQYYVNEFYNAV--IVNSVRALGKGLNAFDEYVIGGAVRLVGFTAGAGGR 591 Query: 643 EIQHLQSGDFRLYCLYVVAALVVLLIAIA 671 + L +G + Y L + L+V++ AI Sbjct: 592 VLTRLNNGQTQTYGLTAIIGLIVIIAAIV 620 >UniRef50_A7GV43 Proton-translocating NADH-quinone oxidoreductase, chain L n=8 Tax=Bacillaceae RepID=A7GV43_BACCN Length = 620 Score = 318 bits (816), Expect = 3e-85, Method: Composition-based stats. Identities = 152/675 (22%), Positives = 275/675 (40%), Gaps = 77/675 (11%) Query: 7 LTWSLILYLFASLASLFLLGLDRLAIK-----LSGITSLVGGVIGIISGITQLHAGVTLV 61 W + L+ AS L L G I L SLVG VI ++ + + T + Sbjct: 4 YAWLIPLFPLASFMLLILFGRKLKGISSLLGSLFAFLSLVGAVIVLLERFSSENVKHTWL 63 Query: 62 ARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIF 121 A + +++L+A M+L+++ + + +Y+ YM+ E + ++ +F Sbjct: 64 WLKAGSVDI-SFGFEVNALNALMLLIVTTVSFLVHVYAKGYMQGDE--RLSVFYAYLGLF 120 Query: 122 IASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQ-DKTSINAGMLYFFIAHAGSVLIMI 180 +M+ L++ N V +E++ L S+ L+ + + A F + G + I Sbjct: 121 TFAMLGLVISTNLLQLYVFWELVGLGSFLLIGFYFFKEEAKAAAQKAFIMTRIGDACLFI 180 Query: 181 AFLLMGRESGSLD----FASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHP 236 +L+ ++GS D F + +T ++SP + + L F G K+G PLH+WLP A Sbjct: 181 GMILLFWQAGSFDYDVIFKAVQTEAISPSIITLTALFIFIGAVGKSGQFPLHTWLPDAM- 239 Query: 237 AAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYAL 295 P+ SAL + MV G++ + + +A V +G +A+ AL Sbjct: 240 EGPTPVSALIHAATMVAAGVYLVAAMFPLFVASPVAMQ----TVAIVGGFTAIFAASIAL 295 Query: 296 AEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLL 355 + DIKR+LA+STV +G ++LA+G A G + ++FHL HA FK LL Sbjct: 296 VQTDIKRILAYSTVSQLGYMMLALGSA--------------GYVASIFHLTTHAFFKALL 341 Query: 356 FLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLF 415 FL AG++I +HT ++ +MG L K+M T L+G AIS +P +GF S+ + + Sbjct: 342 FLAAGSVIHAVHTQNIHEMGGLQKKMKVTGLLFLVGTFAISGVPFFSGFFSKDEILMATW 401 Query: 416 SLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMI 475 + V+ + L ++Y + F G R+ E +E P M Sbjct: 402 MHG----------NYVLFVLAILATFLTSFYMFRLYFLVFTGEERAK--REVRESPRIMT 449 Query: 476 VAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLL 535 + M L V I + + + G P+ ++ Sbjct: 450 LPMTALGVFAVAIGYIHTPWFGTFLGDWLIKDVSFQVAQGHG-------------PAWIM 496 Query: 536 LLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALF 595 ++ + L ++R+ R WA G G L + + Sbjct: 497 VIATLVSFGGILLAYLMYNKRSLSRD----WAGGEGTI-------------LSHLLIKKY 539 Query: 596 RLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLY 655 + + T + + + E E + + I S + + LQ+G+ ++Y Sbjct: 540 YIDEIYHVT--VLPIVKGIAYTLHLFEVCIVEGIAKLIQSLVKGGSYGGSKLQNGNVQVY 597 Query: 656 CLYVVAALVVLLIAI 670 +L L++ + Sbjct: 598 GTVTAISLAALVVIL 612 >UniRef50_B1KJV8 Proton-translocating NADH-quinone oxidoreductase, chain L n=2 Tax=Shewanella RepID=B1KJV8_SHEWM Length = 622 Score = 318 bits (815), Expect = 5e-85, Method: Composition-based stats. Identities = 140/617 (22%), Positives = 247/617 (40%), Gaps = 85/617 (13%) Query: 71 ADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLV 130 TL +D LS M+ +I+ + + LYS +YM+E ++N+F+++M+ L++ Sbjct: 74 LSFTLYLDPLSLVMITIITCIGALIHLYSASYMKEDAD--ICRFFVYLNLFVSAMLFLVL 131 Query: 131 MDNAFWFIVLFEMMSLSSWFLVIARQDK-TSINAGMLYFFIAHAGSVLIMIAFLLMGRES 189 DN + +E + L S+ L+ + + A F I G ++I +L+ + Sbjct: 132 ADNLILLYLGWEGVGLCSYLLIGFWYREVKNSQAANKAFIITRIGDTAMLIGIILIFYQF 191 Query: 190 GSLDFASFRTLSL------------SPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPA 237 +L+ + S + GL S LL F G K+ +PLHSWLP A A Sbjct: 192 DTLNIQQIQAHSQQLLQNSELLTKGAVGLTSLCCLLLFAGAAGKSAQVPLHSWLPDAM-A 250 Query: 238 APSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALA 296 P+ SAL + MV GI+ + + ++L + L + + +G I+ +LG ALA Sbjct: 251 GPTPVSALIHAATMVTAGIYLVAR-NIELFSLAPDVLHF---IAIVGVITLILGATSALA 306 Query: 297 EQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLF 356 + D+KR+LA+ST+ +G + LA+GV A+FHL+ HA FK LLF Sbjct: 307 QTDLKRILAYSTISQLGYMFLALGVGSA--------------SAAVFHLMTHAFFKALLF 352 Query: 357 LGAGAIISRL-HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLF 415 L AGA+I + H ++ KMG L K P A + IGC A++++P +GF S+ + Sbjct: 353 LSAGALIYCMHHEKNIFKMGGLRKSQPLLALSFGIGCAALASLPMTSGFFSKELILERTL 412 Query: 416 SLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMI 475 + PI V + K++ + F G P M Sbjct: 413 FAQQ----------PILWWGGVVGAFFTALYSAKLFFVIFFGK---LSRPSTHNTPRAMA 459 Query: 476 VAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLL 535 ++ L L ++ + + + + PP + P L Sbjct: 460 AVLIALMLLSLIGGIQPQGVFAHFAALEQSLITAPPLSALEHW-----------LPIFLP 508 Query: 536 LLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALF 595 +L + + + ++ + + + G SG ++ F Sbjct: 509 VLTVILAWFLFIKGMFTPNSQPSQPSVGAK-----QQLQRFLHSGWAFDSLYHLILVKPF 563 Query: 596 RLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLY 655 RL + +++ R + + L +++ Q+G R Y Sbjct: 564 RL-------------------ISAYNRRDIVDQLYRQLERLSSLLYRQLNRFQTGQLRHY 604 Query: 656 CLYVVAALVVLLIAIAV 672 + VL IA + Sbjct: 605 SA-SLVIFCVLAIAWGL 620 >UniRef50_D2BHY2 NADH:quinone oxidoreductase subunit 5 (Chain L) n=5 Tax=Dehalococcoides RepID=D2BHY2_DEHSV Length = 654 Score = 318 bits (814), Expect = 7e-85, Method: Composition-based stats. Identities = 160/687 (23%), Positives = 272/687 (39%), Gaps = 63/687 (9%) Query: 6 LLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHA--GVTLVAR 63 ++ LI ++ F L+ L GI + G ++ I G+T L GV+ A Sbjct: 9 IMLLPLICGALIAMGYAFFCKKPALSGYL-GIAGVGGSLLLSIWGLTGLLGKEGVSHYAS 67 Query: 64 FAPPFEFAD-----LTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFM 118 F + L L D L+ M VI + ++ +YS YM + KG F+ Sbjct: 68 GFSWFSIGNSVDISLNLNFDPLAGIMCFVILFVSLMVHIYSQGYM--HGDKGYPRYYAFL 125 Query: 119 NIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLY-FFIAHAGSVL 177 + F ASM+ L++ DN + +E++ L+S+ L+ + + F + G V Sbjct: 126 SFFTASMLGLVLSDNLLFTFFFWELVGLASYLLIGFWFTRPAAANAAKKAFIVTRIGDVG 185 Query: 178 IMIAFLLMGRESGSLDFASFRTLS----LSPGLASAVFLLAFFGFGAKAGMMPLHSWLPR 233 + A L++ +G+LD S ++ + G + L F G K+ PLH WLP Sbjct: 186 FLAAILILFANTGTLDINSLNGMAEMGFIGAGTVTVAALGIFAGAVGKSAQFPLHVWLPD 245 Query: 234 AHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVL 292 A P+ SAL + MV G+F + + + LW V IGA++A+ Sbjct: 246 AM-EGPTPVSALIHAATMVAAGVFLVARTYPIFESSATAMLW----VSIIGAVTAIFAAT 300 Query: 293 YALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFK 352 AL D+KR+LA+STV +G ++L +G G+ +FHL NHA FK Sbjct: 301 MALVMNDMKRILAYSTVSQLGYMMLGLGTG--------------GIAIGIFHLFNHAFFK 346 Query: 353 GLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQ 412 LLFLG+G++ T D+ +MG L+K MP T+ LI L+++ I PL+GF S+ Sbjct: 347 SLLFLGSGSVNHATGTFDIREMGGLSKPMPVTSKTFLIASLSLAGIWPLSGFFSKDEILA 406 Query: 413 SLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPN 472 I ++ +T L ++Y + F G R E P Sbjct: 407 GAMD-----------GQVILFILALITVFLTAFYMFRLYFVAFGGTYRGKG--HPHESPK 453 Query: 473 TMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPS 532 M +L+L V+ L + +T GI L P + Sbjct: 454 VMSWPLLILVVPSVISGLLNA--GGSFSGFLGEEVHTGFFEGLFGILLHPLALVSLAVAG 511 Query: 533 LLLLLLLAM-------PLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQ 585 + L M P + + W + + + G + Sbjct: 512 GGIYLAFLMYKKKSLSPAVFSERFKWLYMIFSKKYWMDELYE-GVISRTLLMKGLFAFAA 570 Query: 586 PLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQ 645 + L+ + + +R ++ + + + + + T K + Sbjct: 571 FFDKKV-----VDGGLNGFFIQKVLFSRLFSRFRTADERIVDGAVNGVAAITVESGKVGR 625 Query: 646 HLQSGDFRLYCLYVVAALVVLLIAIAV 672 Q+G + Y +Y+ A +VVL++A + Sbjct: 626 KAQTGQLQSYGIYLAAGVVVLVMAALI 652 >UniRef50_D0ZDU7 Formate hydrogenlyase subunit 3 n=2 Tax=Edwardsiella RepID=D0ZDU7_EDWTE Length = 633 Score = 318 bits (814), Expect = 7e-85, Method: Composition-based stats. Identities = 246/609 (40%), Positives = 351/609 (57%), Gaps = 11/609 (1%) Query: 1 MDALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTL 60 M LQL L LYL +++ +L G+ RL +++ L+ + G A + Sbjct: 1 MSILQLFNLMLALYLCSAVIALAFSGIGRLGARIAAAGGLL----AGLCGSAAAAALLLQ 56 Query: 61 VARFAPP-FEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMN 119 +F P F L + L+ M+L+ SL+ ++C+L + + R GK A + G MN Sbjct: 57 APQFPPAILLFNRLPVLFSPLNNLMLLLTSLISLLCALSAFSVSRHDTGKAARS-GCLMN 115 Query: 120 IFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIM 179 + A++ L+V ++A F+V+ E+MSLS+ LV + A LY+ ++ GS+ ++ Sbjct: 116 LLSAAISLLVVSNDAPTFMVMLELMSLSAALLVCQGGSAKARRAAGLYWLMSRLGSLALL 175 Query: 180 IAFLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAP 239 + F L+ R S +L + F SLS S V LL GFG G++PLH W+P H AP Sbjct: 176 LCFWLLWRASDTLLLSEFHLASLSHAQQSIVLLLGLLGFGIVTGLVPLHGWIPELHAHAP 235 Query: 240 SHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQD 299 + A+ L + VM+KIG+FG+LK+++D L L +L A++A +G LYALAE D Sbjct: 236 APAATLFASVMLKIGLFGLLKLSIDWLGVPPLWWGLLLLCCG--ALTAFIGGLYALAEHD 293 Query: 300 IKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGA 359 ++RLLA+ TVEN GIILL + ++G++L PLL V+GLL LFHL+NH LFKG LF G Sbjct: 294 LRRLLAYHTVENSGIILLGLSACVIGVALGSPLLAVMGLLAGLFHLINHTLFKGGLFFGT 353 Query: 360 GAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSR 419 GA+ HD++KMG L +RMP L+ +A++A+PPL+GF+SEWYT+QSLFSLS+ Sbjct: 354 GALTHATGLHDIDKMGGLLRRMPLLGLMMLLALMAMAALPPLSGFVSEWYTYQSLFSLSQ 413 Query: 420 VEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAML 479 A AL+L P+AMV LA+ G LAVMC K++G+TF GAPRS A P M++ L Sbjct: 414 RGAGALRLLAPLAMVALAIAGALAVMCVAKIFGMTFLGAPRSEAAANPGATPWNMLLPTL 473 Query: 480 LLAALCVLIALSASWLAPKIMHIAHAFTNTP---PATVASGIALVPGTFHTQVTPSLLLL 536 LL+ CVL + A W+ P ++ ++ A I T ++P L+ L Sbjct: 474 LLSLCCVLFGVGAPWVVPALLRLSAQVLQLAIGSDALTMGAIMSPGSGNLTLLSPPLMTL 533 Query: 537 LLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFR 596 LLLA PLLP L R R RR GDAW CGYG E M + G QPLRV+FS LF Sbjct: 534 LLLAFPLLPLLLSALYRGSRLPARRHGDAWTCGYGHEAGMVVTAGGFAQPLRVLFSPLFA 593 Query: 597 LRQQLDPTL 605 LR+ +P Sbjct: 594 LRRVCNPAP 602 >UniRef50_A1ZLY6 NAD(P)H-quinone oxidoreductase chain 5 (NAD(P)Hdehydrogenase I, chain 5) n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZLY6_9SPHI Length = 702 Score = 317 bits (813), Expect = 7e-85, Method: Composition-based stats. Identities = 141/705 (20%), Positives = 269/705 (38%), Gaps = 86/705 (12%) Query: 26 GLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLV--ARFAPPFEFADLTLRMDSLSAF 83 + R + LV V+ I++ L + F+ + L +D+LSA Sbjct: 25 KIKRGGGHFATAVLLVTTVLAIVTAWQVLGGQPLYIDIYWFSLGTRSFKVDLYIDNLSAL 84 Query: 84 MVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEM 143 M++V++L+ + ++SL YM+ K ++ +F SM+ +++ N + +E+ Sbjct: 85 MMIVVTLVSALVHMFSLEYMK--TDKNYNRYFAYLGLFTFSMLGIIIFHNLLIIYIFWEL 142 Query: 144 MSLSSWFLVIARQDKTSI-NAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRT--- 199 + +SS+ L+ +K S A F + G V + LL+ G + S Sbjct: 143 VGVSSYLLIGFWYEKKSATRASQKAFLVNRIGDVGFLAGILLVFNYFGDFNLLSIAQSPQ 202 Query: 200 -LSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFG 257 SLS G+ + L F G K+ PL WLP A P+ SAL + MV G++ Sbjct: 203 FASLSVGVLLIIGLCLFCGAVGKSAQFPLQVWLPDAM-EGPTPVSALIHAATMVAAGVYL 261 Query: 258 ILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILL 317 + ++ L L ++ IG I+A +G ALA+ DIK++LA+ST+ +G +++ Sbjct: 262 LARIFFLL------NLEALSVIATIGCITAFIGAFSALAQSDIKKVLAYSTISQLGYMVM 315 Query: 318 AVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLH---------- 367 +GV +L HLL HA FK LFL AGA+I +H Sbjct: 316 GMGVG--------------AYEASLLHLLTHAFFKACLFLCAGAVIHSMHQLEHKLNIHF 361 Query: 368 -THDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQ 426 +M MG L K MP+T ++ A++ +P +GF+S+ + + + + Sbjct: 362 DAQNMYLMGGLRKAMPFTFMCYVLSAAALAGLPFFSGFLSKDAILSGSLAWASFKGGGVW 421 Query: 427 LAGPIAMVMLAVTGGLAVMCFVKMYGITFCG--------APRSTHAEEAQEVPNTMIVAM 478 P+ ++ L + + F G + ++VP M + + Sbjct: 422 YLLPLFGF---LSAFLTAFYMGRQLFLVFFGHLELEKVFEEAKGALAKVKDVPLQMKIPL 478 Query: 479 LLLAALCVLIALSASWLAPKIMHIAHAFTNTP-PATVASGIALVPGTFHTQVTPSLLLLL 537 +LA + + +S + + + +A + T V + + Sbjct: 479 GVLALGALWLMVSLNPFDAESGALWQWLVPANKSKVIADSVFTELATSSHHVHGFTIAVS 538 Query: 538 LLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRL 597 ++ L GL + R + + + + L Sbjct: 539 VILAFLGLGLAYALYRKHKVHPEYALLGTPALFHLSHHSLYIDKLYKNTVARFSLRLSHK 598 Query: 598 RQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRL----------------- 640 +D ++ + + T WD++V+ +V+ + Sbjct: 599 SFAVDDLY--DQVFTNGIVKFSGTVARWDKKVVDGVVNFVAKFYVVLAHIIAWIDKAIVD 656 Query: 641 -------------AKEIQHLQSGDFRLYCLYVVAALVVLLIAIAV 672 + + Q+G + Y L+VV +L+ L++ + V Sbjct: 657 GFVHLLAYLAKFTGRISRSFQNGHIQSYYLWVVISLIALVLFLVV 701 >UniRef50_Q1RKE6 NADH-quinone oxidoreductase subunit L n=15 Tax=Rickettsia RepID=NUOL_RICBR Length = 642 Score = 317 bits (813), Expect = 8e-85, Method: Composition-based stats. Identities = 143/684 (20%), Positives = 256/684 (37%), Gaps = 78/684 (11%) Query: 7 LTWSLILYLFASLAS--LFLLGLDRLAIKLSGITSL-VGGVIGIISGITQLHAGVTLVAR 63 + +IL AS LF+ +D+ + + L + + +I G + + Sbjct: 5 IAIMIILLPLASALINGLFVRRIDKKLASIVATSFLSLSALFALIIFYHTGLNGHIIHIK 64 Query: 64 FAPPFEF----ADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMN 119 P E D ++ +D L++ M + ++ + V +YSL YM KG F++ Sbjct: 65 LLPWIEVSQFKVDWSIYIDQLTSIMFIAVTWVSSVVHIYSLGYMSR--DKGIVRFLSFLS 122 Query: 120 IFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSI-NAGMLYFFIAHAGSVLI 178 +F M+ L+ DN +E + + S+ L+ K S A + F G Sbjct: 123 LFTFFMLMLVSADNFLQLFFGWEGVGICSYLLIGFWYSKESANKAAIKAFIANRVGDFAF 182 Query: 179 MIAFLLMGRESGSLDFASFRTLS------------LSPGLASAVFLLAFFGFGAKAGMMP 226 ++ + + S ++ L+ + LL F G K+ + Sbjct: 183 ILGVITIIFYCHSANYEDVFLLAPKLANTKILLADFEISILDIACLLLFIGCMGKSAQIG 242 Query: 227 LHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAI 285 LH WLP A P+ SAL + MV G+F + + + + + + IG I Sbjct: 243 LHVWLPDAM-EGPTPVSALIHAATMVTAGVFLVARCSYLFEYSPMVLQF----ITIIGGI 297 Query: 286 SALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHL 345 + L A+ + DIK+++A+ST +G + +A GV+ +FHL Sbjct: 298 TCLFAASIAIMQNDIKKIIAYSTCSQLGYMFMACGVS--------------AYNSGIFHL 343 Query: 346 LNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFI 405 + HA FK LLFL AG++I +H D+ KMG L +MP T LIG LA+ I PL GF Sbjct: 344 VTHAFFKALLFLSAGSVIHAVHEQDIFKMGELRNKMPITYGNFLIGSLALIGIYPLAGFY 403 Query: 406 SEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHA- 464 S+ ++ +S +G + + L + +K+ + F G R Sbjct: 404 SKDSILEAAYS-----------SGSFMFIFGILAAILTAIYSMKIIMLVFHGKTRLEKDV 452 Query: 465 -EEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPG 523 E A E P M + LL A + +L + F ++ A + + Sbjct: 453 FEHAHEPPKVMNNPLTLLVAGSFFSGMIGYYLL-SMDKPNGYFHDSLLNLHAYKLLIT-- 509 Query: 524 TFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGV 583 H + LL +++ + ++ G+Y + RR + Sbjct: 510 --HPPLHIKLLPMVVGIIGIVVGIYLYKSDVVMSFLRRQE-----------------SSK 550 Query: 584 MQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKE 643 + + + + + + + D + ++ Sbjct: 551 DNYFTKILINKYYFDELYNFLIVKPINCLACLFYSGDQK-IIDRFGPNGFARSVNCFSRL 609 Query: 644 IQHLQSGDFRLYCLYVVAALVVLL 667 Q+G Y LYVV +VV + Sbjct: 610 TGKTQTGYVFNYTLYVVLFVVVTI 633 >UniRef50_D2QRI2 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QRI2_9SPHI Length = 635 Score = 317 bits (812), Expect = 1e-84, Method: Composition-based stats. Identities = 153/670 (22%), Positives = 285/670 (42%), Gaps = 55/670 (8%) Query: 5 QLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARF 64 LL S++L FA L + R+A ++ + + G ++ ++ + G+TL + Sbjct: 10 HLLMASILLLPFAGFLVLT-MASRRVAQLIAVLLTGAGLLLSVLLAVNLPEQGITLQTNW 68 Query: 65 AP-PFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIA 123 A +T R+D+L+A M+L++ + ++ +YS++Y+ ++ ++ +F+ Sbjct: 69 AILSGASFPVTFRVDALAALMLLLVHFVALLVQVYSISYL--HDEPKLRRYSSYLQLFVG 126 Query: 124 SMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSI-NAGMLYFFIAHAGSVLIMIAF 182 +M+ +++ N +E++ L+S+ L+ ++ + A F + G + +I Sbjct: 127 AMLGIVLAGNLLVMYGFWELVGLASYLLIGFYAERPAASQAAKKAFLMNRVGDIGFLIGI 186 Query: 183 LLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHA 242 L +LDF + +A+ L F G K+ PL +WLP A P+ Sbjct: 187 FLTYYYFDTLDFTALADKGADGIAPTALGLCLFMGCVGKSAQFPLLTWLPDAM-EGPTPV 245 Query: 243 SALM-SGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIK 301 SAL+ + MV GIF + +V L + + + + G A+ + DIK Sbjct: 246 SALLHAATMVAAGIFLLARVHPLLSPDALVVITIIGTITTL------WGGYSAVFQTDIK 299 Query: 302 RLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGA 361 ++LA+STV +G++++ +G + GA+FHLL HA FK LFL AGA Sbjct: 300 KVLAFSTVSQLGLMVVGMGTGN--------------VAGAMFHLLTHAFFKAGLFLSAGA 345 Query: 362 IISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVE 421 II +H+ DM +MG L K +P T A I A+S +P L+GF+S+ F + + Sbjct: 346 IIHAVHSQDMRQMGGLHKVLPTTFIAYTICAAALSGLPFLSGFLSKEAILGGAFGWAEAQ 405 Query: 422 AVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRST--HAEEAQEVPNTMIVAML 479 A L L+ P V++ + GL + + + F A RS A E M ++ Sbjct: 406 ASGLALSIP---VLVLFSSGLTAFYMARQWRLVFFSAYRSEITPLSAAHEPGWLMRGPVV 462 Query: 480 LLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLL 539 +LAAL + + S + L + + P + L + Sbjct: 463 ILAALSLWLWFSVNPL-------------------SGSGSWFFRLLPLADEPHVWWLAPV 503 Query: 540 AMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQ 599 ++ L+ W R R + YG+ + ++P + + L R Q Sbjct: 504 SVALVLLGGWAGFRLPEPNADRPYVQLSVNYGFLDLFYDRLA--IRPTVRLAAFLNRTDQ 561 Query: 600 QLDPTLRLNKGLAHVT--ARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCL 657 + + G+ V + + ++ RL + + +Q+G + Y Sbjct: 562 RAIDGVVNGAGIVTVVLAHLTSLLDRMGVDGLVNGAAWLAGRLGQVARSVQNGRVQSYIT 621 Query: 658 YVVAALVVLL 667 V L+V+L Sbjct: 622 AAVMGLLVIL 631 >UniRef50_C7JBM0 NADH-quinone oxidoreductase chain L n=8 Tax=Acetobacter pasteurianus RepID=C7JBM0_ACEP3 Length = 646 Score = 317 bits (812), Expect = 1e-84, Method: Composition-based stats. Identities = 158/655 (24%), Positives = 262/655 (40%), Gaps = 78/655 (11%) Query: 32 IKLSGITSLVGGVIGIISGITQLHAGVTLVARFAPPFEFADLTLRMDSLSAFMVLVISLL 91 L I +L GG + T L A F A TLR D+LS MV ++ ++ Sbjct: 45 ATLCAIGALWGGWLAGFGHSTVLLAQWVHAGGFD-----ATWTLRFDALSVTMVAMVLVV 99 Query: 92 VVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFL 151 ++ YSL YM ++ ++++F +M+ L+ ++ +E + L+S+ L Sbjct: 100 SLLVHCYSLGYMS-HDAMPTYRFFSYLSLFTFAMLMLVSSNDLIQLFFGWEGVGLASYLL 158 Query: 152 VIARQDKTSI-NAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRT----------- 199 + D+ S A + F + + ++ L+ ++ + + Sbjct: 159 IGYWYDRPSATAAAIKAFVVNRVADLFFLVGIGLIYVLFHTVQYDAIFAQVPQVLNAPYT 218 Query: 200 -LSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFG 257 +S + + LL F G K+ + LH+WLP A P+ SAL + MV G+F Sbjct: 219 LFGISFRMLEVICLLLFVGAMGKSAQLFLHTWLPDAM-EGPTPVSALIHAATMVTAGVFL 277 Query: 258 ILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILL 317 + +++ L ++ IGA + + + DIKR +A+ST +G + Sbjct: 278 MARMSPLL----EFAPATRTFIILIGATTCFFAATVGMVQPDIKRTIAYSTCSQLGYMFA 333 Query: 318 AVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLH-THDMEKMGA 376 AVGV ++FHL HA FK LLFLGAG++I +H +M KMG Sbjct: 334 AVGVG--------------AYQASVFHLTTHAFFKALLFLGAGSVIHAMHDEQNMFKMGG 379 Query: 377 LAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVML 436 L K++P T IG LA++ + P G+ S+ +L+S ++ G Sbjct: 380 LWKKLPLTYTVMWIGSLALAGVFPFAGYWSKDAILNALWSTGSSASIYAWSLG------- 432 Query: 437 AVTGGLAVMCFVKMYGITFCGA-PRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWL 495 +T L ++ + F G + + A E P M V ++LLA V+ + + Sbjct: 433 TITAFLTAFYSWRLIFLVFHGQAADAHARDAAHESPAVMSVPLVLLAFGAVVAGILLAPF 492 Query: 496 A---PKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWC 552 +I A N P T+ + VPG + PSL L +A+ +L + Sbjct: 493 YIGTHQISFWEGAIFNAPDNTIMENLEHVPGLI--AILPSLAGLAGIAVAVLCYVL---- 546 Query: 553 RSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLA 612 T A ACG PL + + D + A Sbjct: 547 ----NPALPTNMARACG----------------PLYRFLLNKWYFDELYDAIF-VRPYAA 585 Query: 613 HVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLL 667 + E E V +V A + A + LQ+G +Y V+A LVVLL Sbjct: 586 IARVLWKDGEEGVVEAVPHDVVQAARTSAAQAVKLQTGSIAIYAFTVLAGLVVLL 640 >UniRef50_B2IHV5 Proton-translocating NADH-quinone oxidoreductase, chain L n=8 Tax=cellular organisms RepID=B2IHV5_BEII9 Length = 666 Score = 317 bits (812), Expect = 1e-84, Method: Composition-based stats. Identities = 150/706 (21%), Positives = 257/706 (36%), Gaps = 93/706 (13%) Query: 9 WSLILYLFASLA--SLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAP 66 L +L A + + + + L + +L+ + + G+ A L+A + Sbjct: 8 LPLAGFLIAGIFGRVIGARASEIVTTSLLFVAALLSWITFVQVGLGVAPARTELLAPWFD 67 Query: 67 PFEF-ADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASM 125 D LR+D+L+A M++V++ + + LYS+ YM +E + +++ F +M Sbjct: 68 SGALQVDWALRIDTLTAVMLVVVTTVSALVHLYSIGYM--HEDPSRSRFFAYLSFFTFTM 125 Query: 126 VALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSI-NAGMLYFFIAHAGSVLIMIAFLL 184 + L+ DN +E + L+S+ L+ +K S A + F G ++ L Sbjct: 126 LTLVTADNLVQMFFGWEGVGLASYLLIGFWYEKPSACAAAIKAFVANRVGDFGFLLGIFL 185 Query: 185 MGRESGSLDFA------------SFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLP 232 + + S+ F S + LL F G K+ LH+WLP Sbjct: 186 VFLLTHSVSFDQVFAAAPSLAGKSLHVFGHDFDAMTITCLLLFMGAMGKSAQFLLHTWLP 245 Query: 233 RAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGV 291 A P+ SAL + MV G+F + +++ L Q + L + V IGA +A Sbjct: 246 DAM-EGPTPVSALIHAATMVTAGVFMVARLS-PLFEQAPVALSF---VTIIGATTAFFAA 300 Query: 292 LYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALF 351 L + DIKR++A+ST +G + +A+GV L +FHL HA F Sbjct: 301 TVGLVQNDIKRVIAYSTCSQLGYMFVALGVGGYSL--------------GIFHLFTHAFF 346 Query: 352 KGLLFLGAGAIISRL-HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYT 410 K LLFLGAG++I + H DM KMGAL R+P+T +G LA++ P G+ S+ Sbjct: 347 KALLFLGAGSVIHAMHHEQDMRKMGALRDRIPFTFWMMTLGTLALTGFPLTAGYFSKDAI 406 Query: 411 WQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPR---------- 460 ++ F+ R A+ V V GL ++ +TF G Sbjct: 407 IEAAFASERTGALY-------GYVATVVAAGLTSFYSWRLVFMTFFGPAHWGADAHAAHD 459 Query: 461 --------------STHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAF 506 HA E E P M + +L+L A V L + Sbjct: 460 DHGHAHASGHDDHGHAHALEPHEPPFVMRLPLLILGAGAVFAGL---LFDHSFIGEGQEG 516 Query: 507 TNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAW 566 + L ++A+ L LY R A + Sbjct: 517 FWKEALFYGPNNHIFHQMEEIPRLAGLAPTFMMALGFLVSLYVYILRPGTAQRWAQTNP- 575 Query: 567 ACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWD 626 + + + D L + + F D Sbjct: 576 -------------------LVYNFLLNKWYFDELYDLILIRPAFWLGRLFWKRGDQGFID 616 Query: 627 ERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLIAIAV 672 + + + + + LQ+G Y ++ + ++ V Sbjct: 617 RFGPDGVSAVVIDVTRRVVKLQTGYIYHYAFAMLIGVAAIVTFYVV 662 >UniRef50_C6VXR9 Proton-translocating NADH-quinone oxidoreductase, chain L n=5 Tax=Bacteria RepID=C6VXR9_DYAFD Length = 639 Score = 317 bits (812), Expect = 1e-84, Method: Composition-based stats. Identities = 143/655 (21%), Positives = 257/655 (39%), Gaps = 72/655 (10%) Query: 36 GITSLVGGVIGIISGITQLHAGVTLVARFAPPFEF------------ADLTLRMDSLSAF 83 G ++G + + S + + VA + PF + ++D LS Sbjct: 30 GAVGIIGTLAVVASFVLSVMTFNAFVAAGSQPFVLPLFDWITVGDLHIPFSFQIDQLSLL 89 Query: 84 MVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEM 143 M+++I+ + + +YS+ YM G G ++N+F+ M+ L++ N + +E Sbjct: 90 MLMIITGVGSLIHIYSIGYMHHDSGFGK--FFAYLNLFLFFMLLLVLGSNYVIMFIGWEG 147 Query: 144 MSLSSWFLVIARQDKTSIN-AGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASF----- 197 + L S+ L+ T+ N A F + G + ++ + GS+++ Sbjct: 148 VGLCSYLLIGFWNKNTNYNNAARKAFIMNRVGDLGFLLGIFTIIATFGSVEYTEVFSKAA 207 Query: 198 RTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASAL-MSGVMVKIGIF 256 + + + L F G K+ +PL++WLP A A P+ SAL + MV GI+ Sbjct: 208 AGFQVGDPVIITITLFLFVGAMGKSAQIPLYTWLPDAM-AGPTPVSALIHAATMVTAGIY 266 Query: 257 GILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIIL 316 +++ + L +V IG +AL L + DIK++LA+STV +G + Sbjct: 267 MVIRSNVLY----SLAPSTLEIVGIIGGATALFAASIGLLQNDIKKVLAYSTVSQLGYMF 322 Query: 317 LAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRL-HTHDMEKMG 375 + +G + ++FH++ HA FK LLFLGAG++I + D+ MG Sbjct: 323 MGLG--------------AMAYSASMFHVITHAFFKALLFLGAGSVIHAMSDEQDIRSMG 368 Query: 376 ALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVM 435 L K++P T LI +AIS IPP GF S+ +F ++ I V+ Sbjct: 369 GLRKKLPVTFLTFLIATIAISGIPPFAGFFSKDEILAHVFEHNK-----------ILWVI 417 Query: 436 LAVTGGLAVMCFVKMYGITFCGAPRSTH--AEEAQEVPNTMIVAMLLLAALCVLIALSAS 493 + + ++ +TF G R TH E P +M V +++LA L Sbjct: 418 GVLGSVMTSFYMFRLLFLTFFGTFRGTHEQEHHLHESPASMTVPLIILAILSAAGGFIG- 476 Query: 494 WLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCR 553 P+ +H +H P F +L+A+ + L Sbjct: 477 --VPEALHGSHQLAQFMAPLYDLAKTANPAAFAHTSLSHSEEYMLMAISVAAALISAIAA 534 Query: 554 SRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAH 613 + A L+ V + + + D K + Sbjct: 535 YVMYVQKGAVPAADTEEKSG-------------LQRVIYNKYYVDELYDSV--FVKPVKV 579 Query: 614 VTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLI 668 ++ + F + +I +V AK ++ Q+G Y +V +VV+L Sbjct: 580 LSNFLYAAGEFAIDLIIDAVVKLVGLFAKLLRKTQTGSTGEYVFAMVIGIVVILF 634 >UniRef50_C0A9K9 NADH dehydrogenase (Quinone) n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A9K9_9BACT Length = 821 Score = 316 bits (810), Expect = 2e-84, Method: Composition-based stats. Identities = 127/550 (23%), Positives = 226/550 (41%), Gaps = 24/550 (4%) Query: 14 YLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAPPFEFADL 73 +++ + + L + + +V VI + T+V P +L Sbjct: 13 FVWLPVTAFAGRWLGSRTAWFALVAPVVSTVILAALALDARAGAQTVVEIPWIPSLGLNL 72 Query: 74 TLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDN 133 T +D LS F LV+S + V+ +LY+ Y+ ++ + ++ +F+ +M+ ++ N Sbjct: 73 TFLVDGLSLFFALVVSGMGVLVALYAAAYLDDH-YEWHGRFYAYLLLFMGAMLGTVLAGN 131 Query: 134 AFWFIVLFEMMSLSSWFLVIARQDKT-SINAGMLYFFIAHAGSVLIMIAFLLMGRESGSL 192 V +E+ ++S+ L+ DK S + + + ++++ L G +G+ Sbjct: 132 LLLLFVFWELTGIASFLLIGFLHDKEESRSGARMALLVTGLTGLVMLAGVALTGIAAGTW 191 Query: 193 DFASFRTLSL------SPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASA-L 245 D A+ S GL S F+L G K+ P H WLP A AAP+ SA L Sbjct: 192 DLATLLAKGGEAFGPDSRGLLSVAFVLLAVGAMGKSAQFPFHFWLPNAM-AAPTPVSAYL 250 Query: 246 MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLA 305 S MVK+G+F + +V W L++ +G + L L+AL D+K +LA Sbjct: 251 HSATMVKLGVFFVARV----FPIFSDADLWMPLLVTVGFGTMALASLFALLSHDLKAILA 306 Query: 306 WSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISR 365 WSTV +G+++ G+ G+ G L H+ +H FKG LF+ AG I Sbjct: 307 WSTVTTLGMLIGFYGMG--------SRTGANGVQGDLLHVASHVFFKGALFMCAGIIDHA 358 Query: 366 LHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVAL 425 T D+ ++G L +R+PW A I +++ +P GF+S+ Y ++ + Sbjct: 359 TGTRDVRELGGLRRRLPWLAVVVTICAASMAGVPGTLGFVSKEYFLKAQMAFLAQGGGGG 418 Query: 426 QLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALC 485 + + LA+T L V ++ F G E M+V +LA C Sbjct: 419 WAIYAVGLAWLALT--LKVAFSARLVAHVFWGPLTPGATEHFHAPARLMLVPPAILAVAC 476 Query: 486 VLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLP 545 VL + +WL + + + +L++ + L Sbjct: 477 VLFGVWPAWLGAGLDRLGVTGLQAAETLSLHALPSQWAPEVGLSLAALVIGGGVFAVLGR 536 Query: 546 GLYWLWCRSR 555 G + R Sbjct: 537 GRWARLSIPR 546 >UniRef50_B8FRJ9 Proton-translocating NADH-quinone oxidoreductase, chain L n=11 Tax=Firmicutes RepID=B8FRJ9_DESHD Length = 651 Score = 315 bits (808), Expect = 3e-84, Method: Composition-based stats. Identities = 153/698 (21%), Positives = 276/698 (39%), Gaps = 95/698 (13%) Query: 1 MDALQLLTWSLILYLFASLASLFLL--GLDRLAIKLSGITSLVGGVIGIISGITQLHAGV 58 M+ L W + F S + L+ RL+ +S + L + I G+ + +G Sbjct: 5 MNDLFQWAWLIPFLPFLSFLLIALVTKRSKRLSSTISILAILTSFGLSIAIGLGVIQSGS 64 Query: 59 TLVAR--------FAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKG 110 +V + D +D +SA M+ V++L+ + +YS+ YM + G Sbjct: 65 QIVENPVLTTVNWLSIGGLHIDFGTLIDPMSAMMLFVVTLVASMVQIYSIGYM--HGDPG 122 Query: 111 AAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDK-TSINAGMLYFF 169 + F ++F ASM+ +++ N + +E++ L S+ L+ K ++ A F Sbjct: 123 FSRYYAFQSLFAASMLGMVLATNLLQLFIFWELVGLCSYLLIGFWFFKVSAREAAKKAFI 182 Query: 170 IAHAGSVLIMIAFLLMGRESGSLDF-----------ASFRTLSLSPGL--ASAVFLLAFF 216 G +++ L + G+LDF SF +L G+ + + +L F Sbjct: 183 TTRVGDFGLLLGILFLYNTFGTLDFYGPGSLSVQMATSFHDFALIGGVSYLTIMAILVFI 242 Query: 217 GFGAKAGMMPLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWW 275 G K+G PLH WLP A P+ SAL + MV G++ + ++ + L Sbjct: 243 GPVGKSGQFPLHVWLPDAM-EGPTPVSALIHAATMVVAGVYLVARMFFLFDNASPFALQ- 300 Query: 276 GILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTV 335 LV +GA +A+ A+A+ DIKR+LA+ST+ +G ++ A+GV Sbjct: 301 --LVAGMGAFTAIFAATIAIAQDDIKRILAYSTLSQLGYMMFALGVG------------- 345 Query: 336 VGLLGALFHLLNHALFKGLLFLGAGAIISRLH-THDMEKMGALAKRMPWTAAACLIGCLA 394 L ++FHL+ HA FK L+FLGAG++I LH ++ MG L K+MP T IG LA Sbjct: 346 -SLTASMFHLMTHAFFKALMFLGAGSVIHALHHKQNIWDMGGLWKKMPITGTTFFIGVLA 404 Query: 395 ISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGIT 454 I+ IPP GF S+ + + PI + T L +++ + Sbjct: 405 IAGIPPFAGFFSKDEILLAAYH-----------GHPIIFAVGLFTAFLTAFYMSRLFFVA 453 Query: 455 FCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATV 514 F G + + E P M + +++LA V+ A P Sbjct: 454 FMGEEKPEN--HPHESPWVMTLPLIILAFFSVVGGWVA-----------------LPEHN 494 Query: 515 ASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWEN 574 H + + + ++A L GL ++ +R + Y Sbjct: 495 FGYFVHYGEFHHESINWMIATISIIAGVLGIGLAYITYVTRAIKAENVVARFPGVYKLLK 554 Query: 575 AMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIV 634 + + V + + + + ++ + Sbjct: 555 NKYYIDEIYLWFIHKVMDGIVA-------------------KVLYWFDLYIVDGIVNGLA 595 Query: 635 SATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLIAIAV 672 + T+ + ++ +G + Y L A+VV+ + A+ Sbjct: 596 ALTRGSGRALRRTTTGQMQTYALVFFVAIVVIYLVFAL 633 >UniRef50_B2V982 Proton-translocating NADH-quinone oxidoreductase, chain L n=5 Tax=Aquificales RepID=B2V982_SULSY Length = 648 Score = 315 bits (808), Expect = 3e-84, Method: Composition-based stats. Identities = 130/508 (25%), Positives = 227/508 (44%), Gaps = 47/508 (9%) Query: 7 LTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISG----ITQLHAGVTLVA 62 W + + + L G L LSGI +++G I I+ I +G Sbjct: 3 YLWIIPFSPLIAFVIIGLFGYKLLKEPLSGIVAVIGVAISAIASVKGFIDVAESGKYYDL 62 Query: 63 RFAPPFEFADLTLRM----DSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFM 118 + D ++ + D LSA M V++ + +++ YM+ E ++ Sbjct: 63 KLFNWLTIGDYSISVSIFWDPLSALMTCVVTCVSTFIFIFATGYMKGDE--SYPRFFAYL 120 Query: 119 NIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQ-DKTSINAGMLYFFIAHAGSVL 177 ++F+ M+ L + DN +E + L+S+ L+ K++ NA M F + G L Sbjct: 121 SLFVFMMLMLTLSDNLVQLFFGWEGVGLASYLLIGFWHYKKSAANAAMEAFVVNRVGDWL 180 Query: 178 IMIAFLLMGRESGSLDFASF--RTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAH 235 ++ LL G+LD+ + + + + + LL F G K+ +PLH WLP A Sbjct: 181 FLLGILLAFTTFGTLDYLQIFNKLHGMDYIIVTFIALLLFGGAVGKSAQIPLHIWLPNAM 240 Query: 236 PAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYA 294 P+ SAL + MV G++ + ++ M + A + + L V+ IG +SA L Sbjct: 241 -EGPTPVSALIHAATMVAAGVYMVARL-MPVFASSEIALD---TVLFIGTMSAFLAATMG 295 Query: 295 LAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGL 354 L + DIKR++A+ST+ +G + A G+ + +FHL +HA+FK L Sbjct: 296 LVQNDIKRIIAYSTLSQLGYMFAAEGLGLFSE--------------GMFHLTSHAVFKAL 341 Query: 355 LFLGAGAIISRLHTH-DMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQS 413 LFLG+G+++ LH D++KMG + + MP T LIG LA++ IPP GF S+ + Sbjct: 342 LFLGSGSVLIALHHLLDVQKMGQIGRLMPITMGTFLIGSLALAGIPPFVGFFSKDPIIEG 401 Query: 414 LFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTH--AEEAQEVP 471 + ++ A L + L +++ +TF R H E E P Sbjct: 402 AYEINT-----------FAFTFLWLGAFLTAFYIFRLFFLTFFDGDRLDHHIREHVHESP 450 Query: 472 NTMIVAMLLLAALCVLIALSASWLAPKI 499 M + +++LA V++ + + Sbjct: 451 PNMTIPLIVLATATVILGFFREFFINFL 478 >UniRef50_A3ERI6 NADH dehydrogenase (Quinone), chain L n=8 Tax=cellular organisms RepID=A3ERI6_9BACT Length = 639 Score = 315 bits (807), Expect = 4e-84, Method: Composition-based stats. Identities = 144/687 (20%), Positives = 260/687 (37%), Gaps = 84/687 (12%) Query: 8 TWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAPP 67 LI +L L + G S V + + + L Sbjct: 9 LLPLIGFLIVGLFWPYFKGKGHWVTVPLVALSAVLSIRAFMDTLNGPPIHFVLYNWIHSG 68 Query: 68 FEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVA 127 +++ +D L+A M+++++++ + LY++ YM+E G ++++F +M+ Sbjct: 69 HFSVPISIMIDHLTAAMLVMVTVVSTLVHLYTVGYMKEDSGYD--RFFSYISLFTFAMIV 126 Query: 128 LLVMDNAFWFIVLFEMMSLSSWFLVIARQDKT-SINAGMLYFFIAHAGSVLIMIAFLLMG 186 LL+ DN +E + S+ L++ ++ S A F + G ++ L Sbjct: 127 LLLSDNLLELFFGWEGVGFCSYILIVHWYERRPSWMAANKAFIMNRIGDFGFLLGIFLTY 186 Query: 187 RESGSLDFASFRTL-----------------SLSPGLASAVFLLAFFGFGAKAGMMPLHS 229 G+LD+ + S + + + LL F G K+ +PLH Sbjct: 187 NVFGTLDYEGIFRAIPSHLHDTIFPFSVFHSTESASVLTVIALLLFVGAVGKSAQIPLHP 246 Query: 230 WLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISAL 288 WLP A P+ SAL + MV GIF I +++ A + +V GAI+A Sbjct: 247 WLPDAM-EGPTPISALIHAATMVTAGIFMIARLSPIYNASPTALM----VVGWTGAITAF 301 Query: 289 LGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNH 348 + AL ++DIK+++A+ST+ +G +++A GV G +FHLL H Sbjct: 302 VAATIALTQRDIKKIVAYSTMSQLGYMVMACGVGAYG--------------AGIFHLLTH 347 Query: 349 ALFKGLLFLGAGAIISRL-HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISE 407 FK LLFL AG++I L D+ +MG L+K M T L+G LA+S IPP G+ S+ Sbjct: 348 GFFKALLFLAAGSVIHSLNGEQDIFRMGGLSKYMKLTFVTMLLGSLALSGIPPFAGYFSK 407 Query: 408 WYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAP----RSTH 463 F G I + +T L ++ + F G H Sbjct: 408 DLILSDAFQSGPR--------GQIFWAIGLITAVLTAFYTFRLIFMVFTGKENFSNDGHH 459 Query: 464 AEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPG 523 E P M + +++L+ V WL + + + + + + G Sbjct: 460 GHAPHESPLVMTIPLVILSFGAVFAG----WLGDRFDIVGYLSQSMTVPHLMETSGISDG 515 Query: 524 TFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGV 583 T + +L + +A L YG + + + + Sbjct: 516 TLKMISVLAGVLGISVAFFL--------------------------YGRPSGVPLALSKS 549 Query: 584 MQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKE 643 +PL + + + D + + D ++ I S+ Q Sbjct: 550 FRPLFNLSRNKWYFDEIYDAVFTRPAIFLSHILWKEVDKGVID-MIVNNIASSCQSAGAS 608 Query: 644 IQHLQSGDFRLYCLYVVAALVVLLIAI 670 ++ LQ+G + Y L + L ++ Sbjct: 609 LRRLQTGQLQNYALVMALGLFGMVSIF 635 >UniRef50_A5UVF8 Proton-translocating NADH-quinone oxidoreductase, chain L n=5 Tax=Chloroflexaceae RepID=A5UVF8_ROSS1 Length = 654 Score = 315 bits (807), Expect = 4e-84, Method: Composition-based stats. Identities = 157/704 (22%), Positives = 255/704 (36%), Gaps = 93/704 (13%) Query: 7 LTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAG--------V 58 + W + + L+ A + + I+ + L Sbjct: 4 IIWLIPAFPLIGFLLNALVVRRERAAGILASVMVGLSFAATIAAMVVLEGAPSGAKRLTW 63 Query: 59 TLVARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFM 118 TL L D L+A M L+I+ + + +YS+ YM + FM Sbjct: 64 TLWEWIGIADFRVAFGLLFDPLTAVMALLITGVGGLIHIYSIGYM--HGDVRPVRFFAFM 121 Query: 119 NIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSI-------NAGMLYFFIA 171 N+F+ +M+ L++ DN + +E + L S+ L+ D+ S+ A + F + Sbjct: 122 NLFVFAMLMLVMADNLLLLFLGWEGVGLCSFLLIGHYFDRRSVPPGINPSEAAVKAFVVN 181 Query: 172 HAGSVLIMIAFLLMGRESGSLDFASFRTLSLSPGLASAVF-------------------- 211 G ++ A + G+L F LS+S L A+ Sbjct: 182 RVGDAAMLAALFAIFTNFGTLSFYDNPQLSISGYLDQAIVVAGETVDLGAFGQLPLMTGI 241 Query: 212 -LLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQT 269 LL K+ PL++WLP A A P+ SAL + MV G++ I++ Sbjct: 242 TLLMLVAVAGKSAQFPLYTWLPDAM-AGPTPVSALIHAATMVTSGVYLIVRNHTLFDQPA 300 Query: 270 GLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLH 329 W V+ IG ++A +G A+A+ DIKR+LA+STV +G ++ AVG+ Sbjct: 301 SAAPW----VLVIGVMTAFIGATAAVAQLDIKRVLAYSTVSQLGYMVAAVGMG------- 349 Query: 330 DPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLH-THDMEKMGALAKRMPWTAAAC 388 + ++HLL H LFK LLFL AG++I + DM +MG L +P T Sbjct: 350 -------AYVAGMYHLLTHGLFKALLFLAAGSVIHGIGDHQDMRRMGGLRNALPTTFRLY 402 Query: 389 LIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFV 448 +IG LA+S I PL GF S+ + P+A +ML +T + Sbjct: 403 VIGALALSGIFPLAGFWSKDEI---------IAHAWFDARSPLAAIMLILTSAVTAFYMG 453 Query: 449 KMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTN 508 + G+ F G PR E M M+ LA V+ L + Sbjct: 454 RQIGMVFFGRPRDP-TIHGHESGAAMRWTMVALAGGAVVGGLINLPGLHWLNSYLRPVLQ 512 Query: 509 TPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWAC 568 P G+ + L + L L W R G Sbjct: 513 EPEVIYTVGMGI------------LATITTLLSAGAGYLGWKTYARDLEPRIRIGK---- 556 Query: 569 GYGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDER 628 E+ M + L + L A V D+ Sbjct: 557 ----EDPMFR----YLGDLWRGMEIGWGLDWLYQRVFVRPYRAASVFLSDVVDREAIDQV 608 Query: 629 VIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLIAIAV 672 ++ RLA ++ LQ+G R Y L + +++++ A+ Sbjct: 609 LVDGTARGLARLAHGLRALQTGYIRTYALMFLFGVILVVAFFAL 652 >UniRef50_C4V3R7 NADH dehydrogenase (Quinone) n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V3R7_9FIRM Length = 634 Score = 315 bits (807), Expect = 4e-84, Method: Composition-based stats. Identities = 140/526 (26%), Positives = 230/526 (43%), Gaps = 52/526 (9%) Query: 15 LFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAPPFEF---- 70 LF +LA L + R LS ++V + + A V P+ Sbjct: 14 LFPALAFLIIAPFTRREKNLSATIAIVMMALAFAFSVFVALAAVNYQITMGDPYVMKTVW 73 Query: 71 -------ADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIA 123 + + +D L+A M+++++L+ ++ +YS++YM EG G F+++F A Sbjct: 74 AHIGAVELSMGVLIDPLTALMLVIVTLVSLLVYIYSVSYMEHDEGMG--RFFAFISLFSA 131 Query: 124 SMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDK-TSINAGMLYFFIAHAGSVLIMIAF 182 +M+ L+V N V +E + L S+ L+ DK ++ A F G +++ Sbjct: 132 AMLGLVVSVNFLQLYVFWEGVGLCSYLLIGFYYDKVSAREAAKKAFITTRIGDFGMLVGI 191 Query: 183 LLMGRESGSLDFASFR------TLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHP 236 LL+ G++DF R L G + + LL F G K+G PLH WL A Sbjct: 192 LLVQVSFGTMDFIELRLMMPAYVLVAGTGYLTVIGLLLFMGPIGKSGQFPLHVWLLDAME 251 Query: 237 AAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALA 296 ++ + + MV G+F + + + + + +GA +AL + A+ Sbjct: 252 GPTPTSALIHAATMVAAGVFLVARAFFIFSECPLVMNF----IAGLGAFTALFAAVIAVT 307 Query: 297 EQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLF 356 ++ K +LA+ST+ +G ++LAVG+ ++FHL+ HA FK +LF Sbjct: 308 QRRFKAVLAYSTISQLGYMMLAVGIG--------------AFSASMFHLMTHAFFKAMLF 353 Query: 357 LGAGAIISRLH-THDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLF 415 L AGA++ LH D+ KMG L K+MP T LIG LAIS IPP +GF S+ + Sbjct: 354 LCAGAVMHALHDETDITKMGGLWKKMPLTFVTMLIGVLAISGIPPFSGFFSKDEILAAAM 413 Query: 416 SLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMI 475 S +M T L ++ + F G RS H EA EV M Sbjct: 414 HASTP-----------LYLMATFTSFLTAFYMARLLIVAFLGESRSEH--EAHEVDAFMR 460 Query: 476 VAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALV 521 M++LA L ++ L + + A A + +G + V Sbjct: 461 WPMIMLALLTIVSGLWGYFGGFSMWIYADAPHHEAIDWTVAGTSTV 506 >UniRef50_C9RKX6 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RKX6_FIBSS Length = 651 Score = 314 bits (806), Expect = 5e-84, Method: Composition-based stats. Identities = 134/614 (21%), Positives = 253/614 (41%), Gaps = 70/614 (11%) Query: 70 FADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALL 129 A + + +D LS M++V++ + + ++YS+ YMRE + A +++F SM+ L+ Sbjct: 81 VARIGMLVDPLSVMMLVVVTFISFMVNIYSIGYMRE--DRAAGRFFALLSLFSFSMLGLV 138 Query: 130 VMDNAFWFIVLFEMMSLSSWFLVIARQDKT-SINAGMLYFFIAHAGSVLIMIAFLLMGRE 188 + N F + +E++ +SS+ L+ K +++A F + ++ +L+ Sbjct: 139 IATNLFQMFIFWELVGVSSYLLIGFWYHKPSAVSASKQAFILTRFADSFFLLGIVLVSYV 198 Query: 189 SGSLDFASFRTLSL----------------SPGLASAVFLLAFFGFGAKAGMMPLHSWLP 232 GS DF++ +LSL +L F G K+ M P+H WLP Sbjct: 199 VGSFDFSTLNSLSLIDFQKQFINLGLVTIPKSEALVLGSILIFTGGWGKSAMFPMHIWLP 258 Query: 233 RAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVL 292 A +S + S MV G++ + + L + L+M +GA + + + Sbjct: 259 NAMEGPTPVSSIIHSATMVVAGVYLVAR----LFPFFAICDNALTLIMWVGAFTMVFAAV 314 Query: 293 YALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFK 352 A ++DIKR+LA+ST+ +G ++ A+G +G ++ V G + FH+ HA FK Sbjct: 315 IACTQKDIKRILAYSTLSQLGYMMFALGACKIG-----QVVAVTGWTASTFHIFTHAFFK 369 Query: 353 GLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQ 412 LFL AG++I ++ T+D++ MG L K+M T A LI LAIS IPP +GF S+ Sbjct: 370 CSLFLIAGSLIHQVGTNDLDAMGGLGKKMKLTYACTLISILAISGIPPFSGFFSKDEIIL 429 Query: 413 SLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQ-EVP 471 + F + + +T GL +++ + F GAPR + Sbjct: 430 AAFQGHH----------YVVFGLALLTSGLTTFYMFRLFFLAFHGAPRHEGVKAGHVHED 479 Query: 472 NTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTP 531 M + + +LA +L + + + V + L + V Sbjct: 480 FAMTLPIAILAIPALLSGVLGKGIFEQFFVPGQ-------LNVPQLVRLDHAEWLPFVAV 532 Query: 532 SLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVF 591 + ++ L+ +L W + R+G + V Sbjct: 533 GIAVVALVIAWVLYASPWAKVQRALDESNRSG-----------------------IYKVI 569 Query: 592 SALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGD 651 F + +R + A++ + E ++ V +L ++ Q+G Sbjct: 570 YHKFYFDEMYYAVVRQF-IFGGIARVARAFNDYVIEGLLAFTVWFVHKLGDLVRFAQAGY 628 Query: 652 FRLYCLYVVAALVV 665 Y ++ +++ Sbjct: 629 LPFYLGTLIVGVLL 642 >UniRef50_Q895D8 Sodium/proton antiporter shaA n=1 Tax=Clostridium tetani RepID=Q895D8_CLOTE Length = 486 Score = 314 bits (806), Expect = 5e-84, Method: Composition-based stats. Identities = 124/508 (24%), Positives = 235/508 (46%), Gaps = 33/508 (6%) Query: 8 TWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAPP 67 LI LF + ++F+ G R + + + + I T Sbjct: 4 AIVLIPILFPMVIAIFI-GFGRFRENIRNSIVAITVFLNLFFIIYIFKNKGTAFFTVVKI 62 Query: 68 FEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVA 127 EF D+ L++D L F L++S+L + S YS+ YM+ + F + + + Sbjct: 63 NEFLDIYLKIDKLGVFFSLLVSILWIFTSFYSMEYMKHEGKEN--RFFAFFLVTLGVTLG 120 Query: 128 LLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGR 187 + N + +E+++L+++ LVI + ++ +G Y + G+ +++ + + Sbjct: 121 ISFSGNLVTLYLFYEVLTLATFPLVIHSGSREALKSGRKYLIYSFVGATFVLLGMIFLFA 180 Query: 188 ESGSLDF---ASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASA 244 + LDF R L+ L S +++ F GFG KA ++P HSWLP+A AP+ S+ Sbjct: 181 VTKGLDFYPKGIIRDFKLNKTLISTSYIVMFLGFGVKAALVPFHSWLPKAM-VAPTPVSS 239 Query: 245 LMSGV-MVKIGIFGILKVAMDLLAQTGLPLWWG-ILVMAIGAISALLGVLYALAEQDIKR 302 L+ V +VK G+F ++++ + + L +G ++ IS L+G AL + ++K+ Sbjct: 240 LLHAVAVVKSGVFALIRITYYVFGGEIVKLIYGRKYLLLFVTISILMGSFLALHQSNLKK 299 Query: 303 LLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAI 362 LA+ST+ +G ILL + + L L+G L HL+NHA+ K LF G I Sbjct: 300 RLAYSTISQLGYILLGILI-----------LNGNSLVGGLLHLINHAVIKITLFFCVGTI 348 Query: 363 ISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEA 422 + D++++ + K MP+T I +++ IPP NGF+S+WY Q +V Sbjct: 349 MYTRGKTDIDEIKGIGKEMPYTMWCFTISSISLIGIPPTNGFVSKWYLAQGGLLEGKV-- 406 Query: 423 VALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAP---RSTHAEEAQEVPNTMIVAML 479 I +L ++ L M + + + F ++ E +E P M+V ++ Sbjct: 407 --------IFPAILLISALLTAMYLLPIITVAFFKKDEQHKNVEKIEIKEAPKNMLVPII 458 Query: 480 LLAALCVLIALSASWLAPKIMHIAHAFT 507 L+ + +++ L + + ++ I+ Sbjct: 459 LITCITIVLGLYPNPVLNFLLEISKEVI 486 >UniRef50_A8LTG8 NADH dehydrogenase (Quinone) n=58 Tax=Proteobacteria RepID=A8LTG8_DINSH Length = 969 Score = 314 bits (805), Expect = 6e-84, Method: Composition-based stats. Identities = 127/575 (22%), Positives = 231/575 (40%), Gaps = 31/575 (5%) Query: 6 LLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFA 65 L +L+ +L A + L + + + + + ++ +I L V Sbjct: 8 LFIIALLPFLGALVPGLMIRAGRTACASFTAVPTALAFIMLLILSPAVLRGEVITAEIGW 67 Query: 66 PPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASM 125 P + +D L L+I+ + ++ LY+ Y+ + G ++ +F +M Sbjct: 68 LPQLGLSASFFLDGLGLLFALMITGVGLLIILYARFYLSGDDPMGQ--FYTYLLLFQGAM 125 Query: 126 VALLVMDNAFWFIVLFEMMSLSSWFLVIARQD-KTSINAGMLYFFIAHAGSVLIMIAFLL 184 + +++ DN ++ +E+ SLSS+ L+ + + + AG + ++ L+ Sbjct: 126 LGIVLSDNILLLLIFWELTSLSSFLLIGYWKHLPEGRQGARMALAVTGAGGLAMIGGMLI 185 Query: 185 MGRESGSLDFASFRTLS---LSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSH 241 +G GS + + +L G K+ P H WLP A AAP+ Sbjct: 186 LGNIVGSYNLTDILQAGEQIRASEWYLPALILILLGAFTKSAQFPFHFWLPHAM-AAPTP 244 Query: 242 ASA-LMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDI 300 SA L S MVK G+F + ++ L W +V G ++ ++G AL + D+ Sbjct: 245 VSAYLHSATMVKAGVFLMARMWPVLAGTDA----WFYIVATTGLVTMVMGAGIALFKDDL 300 Query: 301 KRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAG 360 K LLA+STV ++G++ + +G T + A+FH++NH FK LF+ AG Sbjct: 301 KALLAFSTVSHLGLLTMLLGFG-----------TQAAAVAAVFHIINHLTFKAALFMTAG 349 Query: 361 AIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRV 420 + HT D++++G L MP T A + L+++ IP NGF+S+ + + Sbjct: 350 IVDHETHTRDIKRLGGLRHLMPITFAIGTVAALSMAGIPLFNGFLSKEMMLEEASHTGWL 409 Query: 421 EAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLL 480 + V+ L+V + G F G R + + + P M + L Sbjct: 410 GNP------WVVPVVATFGALLSVAYSFRFIGHVFLGPVRDDYPAKPHDPPFGMWASPAL 463 Query: 481 LAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLA 540 L L ++I ++ + + A T V +L L+LLA Sbjct: 464 LVVLVLVIGMAPFVAEGIVTAASSAVTGADLHPHLKIWHGFTPALWMSVVATLGGLMLLA 523 Query: 541 MPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENA 575 L L +W +RR + D G Sbjct: 524 --LHGKLDPIWQAARRPEAKAIFDGLVAGLVALTR 556 >UniRef50_C6HUH6 NADH dehydrogenase (Quinone), chain L n=2 Tax=Bacteria RepID=C6HUH6_9BACT Length = 643 Score = 314 bits (804), Expect = 9e-84, Method: Composition-based stats. Identities = 139/641 (21%), Positives = 245/641 (38%), Gaps = 85/641 (13%) Query: 56 AGVTLVARFAPPFEF-ADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAM 114 +TLV + ++L+ D L+A M+ +++ + ++ LY++ YM + G Sbjct: 56 PSLTLVYDWIRSGHLDVGISLQYDHLAAVMLFMVTTVAMLVHLYTVGYM--HGDSGYDRF 113 Query: 115 GFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKT-SINAGMLYFFIAHA 173 ++++F SM+ L++ DN + +E + L S+ L++ ++ S A F + Sbjct: 114 FAYISLFTFSMIMLVLSDNLVEMFIFWEAVGLCSYLLIVHWYERRPSWLAANKAFIMNRV 173 Query: 174 GSVLIMIAFLLMGRESGSLDFASFRTL-----------------SLSPGLASAVFLLAFF 216 G ++ L GS+ FA S + + + LL F Sbjct: 174 GDFGFLLGIFLAYTVFGSVRFAEIFPAIGSHLHQSVNLAAVFHGSWNVPVLDVIALLLFL 233 Query: 217 GFGAKAGMMPLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWW 275 G K+ +PLH WLP A P+ SAL + MV G+F I ++ + Sbjct: 234 GAVGKSAQIPLHPWLPDAM-EGPTPISALIHAATMVTAGVFMIARMN----PLYNAAPFA 288 Query: 276 GILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTV 335 +V GAI+A++ AL + DIK+++A+ST+ +G +++ G+ Sbjct: 289 LHVVAWTGAITAIVAATIALTQPDIKKIVAYSTMSQLGYMVMICGLG------------- 335 Query: 336 VGLLGALFHLLNHALFKGLLFLGAGAIISRL-HTHDMEKMGALAKRMPWTAAACLIGCLA 394 G +FHLL H FK LLFLGAG++I L D+ +MG L K + T A LIG LA Sbjct: 336 -GYGAGIFHLLTHGAFKALLFLGAGSVIHSLSGEQDVFRMGGLRKYVGLTFATMLIGSLA 394 Query: 395 ISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGIT 454 +S IPP G+ S+ + + + G + ++ +T L ++ + Sbjct: 395 LSGIPPFAGYYSKDLILVTAYQQGPL--------GQMLWLIGVLTAVLTAFYSFRLLFLV 446 Query: 455 FCGAPR-----STHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNT 509 F G R HA E P TM + +L+L+ V + Sbjct: 447 FGGKERFHSESQGHAVHPHESPLTMTIPLLVLSIATVFAGWAGE-------------HYG 493 Query: 510 PPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACG 569 +A + L L L L G+ W Sbjct: 494 ILQYLAQELPLPHVHEGEGGFSENALKGLSVAGALFGILIAWAL---------------- 537 Query: 570 YGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERV 629 YG E+++ + + V + + D + + D V Sbjct: 538 YGKESSIPAAFARNLSFFYKVSLHKWYFDEFYDAVFVRPSFAIGRLFWQEVDKGVIDG-V 596 Query: 630 IRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLIAI 670 + + + ++ LQSG + Y + + L+ Sbjct: 597 VNGVAHFFRNSGGGLRRLQSGQIQNYAMAMAIGAFGLVAFY 637 >UniRef50_Q6GBK7 Putative antiporter subunit mnhA2 n=63 Tax=Staphylococcus RepID=MNHA2_STAAS Length = 800 Score = 313 bits (803), Expect = 1e-83, Method: Composition-based stats. Identities = 130/507 (25%), Positives = 229/507 (45%), Gaps = 22/507 (4%) Query: 11 LILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLH--AGVTLVARFAPPF 68 L++ + +A + L+ R K +G +LV VI I + Q+ A + ++ P Sbjct: 6 LLIAILVIMAMILLMSKRRALAKYAGYIALVAPVISSIYFLIQIPSVAKLQYLSTSIPWI 65 Query: 69 EFADLTL--RMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMV 126 + D+ L R+D LS L+ISL+ + Y+ Y+ + F++ +F+ SM+ Sbjct: 66 KTLDINLDLRLDGLSLMFSLIISLIGIAVFFYATQYLSSRKD-NLPRFYFYLTLFMFSMI 124 Query: 127 ALLVMDNAFWFIVLFEMMSLSSWFLVIARQD-KTSINAGMLYFFIAHAGSVLIMIAFLLM 185 +++ DN + +E+ S+SS+ L+ + S M F I G + +++ F+++ Sbjct: 125 GIVLSDNTILMYIFWELTSVSSFLLISYWYNNGDSQFGAMQSFMITVFGGLALLVGFIML 184 Query: 186 GRESGSLDFASF---RTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHA 242 +G+ + + GL + + G K+ P H WLPRA AAP+ Sbjct: 185 YIMTGTNNITEILGQADHIKNHGLFIPMIFMFLLGAFTKSAQFPFHIWLPRAM-AAPTPV 243 Query: 243 SA-LMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIK 301 SA L S MVK GIF +L+ L GL + +V +G I+ L G + AL + D+K Sbjct: 244 SAYLHSATMVKAGIFLLLRFTPLL----GLSNMYVYIVTFVGLITMLFGSITALKQWDLK 299 Query: 302 RLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVV---GLLGALFHLLNHALFKGLLFLG 358 +LA+ST+ +G+I+ VG+ + + L GALFHL+NHA+FK LF+G Sbjct: 300 GILAYSTISQLGMIMAMVGIGGGYAQHQQDAIASIYVFVLFGALFHLMNHAIFKCALFMG 359 Query: 359 AGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLS 418 G + + D+ + + + P I L+++ +P LNGF+S+ +L Sbjct: 360 VGILDHEAGSRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQTG 419 Query: 419 RVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRST--HAEEAQEVPNTMIV 476 ++ +L I V + + + M F S + E P + Sbjct: 420 QLSQFSLISMIAIVFVGV-IASVFTFTYALYMVKEVFWTKYDSKVFTKKNIHE-PWLFSL 477 Query: 477 AMLLLAALCVLIALSASWLAPKIMHIA 503 L+L L +I + I+ +A Sbjct: 478 PSLILMVLVPVIFFVPNIFGKGIIVLA 504 >UniRef50_C1ZFV1 NADH dehydrogenase subunit L n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZFV1_PLALI Length = 696 Score = 313 bits (803), Expect = 1e-83, Method: Composition-based stats. Identities = 145/612 (23%), Positives = 254/612 (41%), Gaps = 59/612 (9%) Query: 71 ADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLV 130 D+ LR D+++A M+++++ + ++ ++++ +YM + KG M +F+ SM L++ Sbjct: 124 VDIVLRADAMTALMLVMVNFVSLLVAIFASSYM--HGDKGYPRFFGAMALFVFSMNMLVL 181 Query: 131 MDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAG-MLYFFIAHAGSVLIMIAFLLMGRES 189 N + +E + L S+ L+ K S A F + G +M A L+ R Sbjct: 182 AGNFIEVFIFWEAVGLCSYLLIGHWYHKPSAAAAARKAFVVNRIGDFGLMTAIFLIYRTF 241 Query: 190 GSLDFASF-------RTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHA 242 GS+DF + + PGL + + LL G K+ PLH WLP A P+ Sbjct: 242 GSVDFETVLDPARLAELAAAQPGLVTTIALLLLLGAIGKSAQFPLHVWLPDAM-EGPTPV 300 Query: 243 SAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIK 301 SAL + MV G++ I + + L +V +GAI+AL+ + AL + D+K Sbjct: 301 SALIHAATMVTAGVYLIARTTPIFVHSPTAQL----VVAGVGAITALVAAITALCQYDLK 356 Query: 302 RLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGA 361 R+LA+STV +G + +A+G A +L T A+FHLL HA FK +LFL AG+ Sbjct: 357 RVLAYSTVSQLGYMFMALGAAAASPALAAHAETF-----AMFHLLTHAFFKAVLFLAAGS 411 Query: 362 IISRLHTH-DMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRV 420 ++ + DM + L K +P T L G LA++ P L+GF S+ ++ ++ Sbjct: 412 VMHAMGDVIDMRRFSGLRKALPITHITFLCGALALAGFPLLSGFWSKDEILAVVWEATQT 471 Query: 421 EAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPR--STHAEEAQEVPNTMIVAM 478 + + +L T L + Y +TF G R + M + + Sbjct: 472 GDYKTYFYLILGVGLL--TSLLTAFYTFRAYYLTFHGPERFPEEAGHHPHDASPAMAIPL 529 Query: 479 LLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLL 538 +LAAL V+ L P A I + P + +++ Sbjct: 530 YILAALAVVAGLILG----------------PTHIYAHYIEMTPNFPTAAPAGMNVGMMV 573 Query: 539 LAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLR 598 L+ L G L YG S + V L Sbjct: 574 LSTVLALGGIGLAYTI---------------YGKATRPEYSDARPLSLWENVSLNGLYLD 618 Query: 599 QQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLY 658 Q + + +A ++A + + ++++ + I+ LQ+G Y Sbjct: 619 QLYGAL--IVRPMATLSAVCEFVDRMILDKIVDAVGLIPIIAGGMIRPLQNGLVSSYAAV 676 Query: 659 VVAALVVLLIAI 670 ++ ++V L ++ Sbjct: 677 MLLGVIVALASV 688 >UniRef50_C1F220 NADH dehydrogenase I, L subunit n=2 Tax=Bacteria RepID=C1F220_ACIC5 Length = 687 Score = 313 bits (803), Expect = 1e-83, Method: Composition-based stats. Identities = 139/600 (23%), Positives = 241/600 (40%), Gaps = 78/600 (13%) Query: 6 LLTWSLILYLFASLASLFLLGLDRL--AIKLSGITSLVGGVIGIISGITQLHAGVTLVAR 63 L W + + A + L+ R A L+ + + ++ +++ + + V V Sbjct: 3 KLLWLIPALPMLAAALIALMPRQRRVPAAALAIGSLGISLLLSLVALVQTIANPVRQVYN 62 Query: 64 FAP---PFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNI 120 F ++ L +D L A M+++++ + ++ +YSL YM E F+ + Sbjct: 63 FNWLQFGSQWVQLGWILDPLCAVMLVMVTFVGLLIFIYSLGYMAHDEN--FTRFFCFLAL 120 Query: 121 FIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLY-FFIAHAGSVLIM 179 F +M+ +++ ++ + +E++ L+S+ L+ K S A F G + ++ Sbjct: 121 FAGAMLGVVLANSLLLLFMCWEIVGLTSYLLIGFWFHKPSAAAAAKKAFITTRIGDLGLL 180 Query: 180 IAFLLMGRESGSLDF----------ASFRTLSLSPGLA-----SAVFLLAFFGFGAKAGM 224 + + + SG+L F ++ + LA +A+ LL F G K+G Sbjct: 181 LGMVWLYASSGTLLFYNNGAGCLEHSALAAMVTQTTLAGMAVSTAIALLLFCGAAGKSGQ 240 Query: 225 MPLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGIL--VMA 281 +PLH WLP A P+ SAL + MV G++ I +V + A L V Sbjct: 241 VPLHVWLPDAM-EGPTPVSALIHAATMVAAGVYLIARVYPLMAAAATPHTISAALQVVAW 299 Query: 282 IGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGA 341 +GAI+A A+A+ DIKR+LA+STV +G ++L +GV G+ Sbjct: 300 VGAITAFFAACIAVAQNDIKRILAYSTVSQLGYMMLGLGVG--------------GVAIG 345 Query: 342 LFHLLNHALFKGLLFLGAGAIIS-RLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPP 400 +FHL+ HA FK LLFLGAG++I D+ MG L + MP T + G LA+ P Sbjct: 346 MFHLITHAFFKALLFLGAGSVIHGCTEEQDIRNMGGLRRFMPITFVTYMCGMLALCGFPL 405 Query: 401 LNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPR 460 GF S+ + + A L + F G R Sbjct: 406 FAGFWSKDEILHAAHGWPISLGP---------FYLGAAGALLTAFYMTRQVCYVFFGPRR 456 Query: 461 STHA---------------EEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHA 505 A + E P M V +++LA VL+ ++ P + + Sbjct: 457 LPEATADLSSPRPPEACVIRDPHESPAVMTVPLIVLALFAVLLGFISTPAWPWFSNFLIS 516 Query: 506 FTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDA 565 T T + L +L+++ ++ + GL W R R D Sbjct: 517 TRATLDLTRFAAADLA------------MLMIVSSLIVFAGLGLGWWLYGRKPIERATDP 564 >UniRef50_Q32RH9 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic n=6 Tax=cellular organisms RepID=NU5C_ZYGCR Length = 702 Score = 313 bits (803), Expect = 1e-83, Method: Composition-based stats. Identities = 159/747 (21%), Positives = 286/747 (38%), Gaps = 126/747 (16%) Query: 1 MDALQLLTWSLIL-----YLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLH 55 M ++ W + L + L + + S I S+ ++ ++ IT L Sbjct: 1 MQSINQYVWIIPLLPCLTAVILGLGLISTKNATKSQRLGSAILSIGALLVTMLLSITVLW 60 Query: 56 AGV-------TLVARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEG 108 V LV+ F ++ +D LSA M+++++ + V+ +Y+ YM +G Sbjct: 61 EQVISDSAYRQLVSWIKVDNLFLEIGCLVDPLSAIMLVLVTTVGVLVMIYTHGYMSHDQG 120 Query: 109 KGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKT-SINAGMLY 167 ++++F ASM+ L++ N +E++ + S+ LV + + A Sbjct: 121 --YVRFFAYLSLFTASMLGLVLSPNLVQVYAFWELVGMCSYLLVGFWFTRPSAAYACQKA 178 Query: 168 FFIAHAGSVLIMIAFLLMGRESGSLDFASFRTL--------SLSPGLASAVFLLAFFGFG 219 F G +++ L + +GSL+F + S + L + +L F G Sbjct: 179 FITNRVGDFGLLLGILALYWLTGSLEFDIVASRAHQLLVENSANTVLLTVCCVLLFLGPI 238 Query: 220 AKAGMMPLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGIL 278 AK+ PLH WLP A P+ SAL + MV G++ + ++ + L + L + + Sbjct: 239 AKSAQFPLHVWLPDAM-EGPTPISALIHAATMVAAGVYLVARL-LPLFQEVPLVMD---I 293 Query: 279 VMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGL 338 V G I+A+LG ALA++D+K+ LA+ST+ +G ++LA+GV Sbjct: 294 VAWTGGITAVLGATVALAQKDLKKGLAYSTMSQLGYMILALGVG--------------SY 339 Query: 339 LGALFHLLNHALFKGLLFLGAGAIISRLH---------THDMEKMGALAKRMPWTAAACL 389 LFHL+ HA K LLFLG+G++I + + +M MG L MP T L Sbjct: 340 QAGLFHLITHAYSKALLFLGSGSVIHGIEPVVGYNPNQSQNMTYMGGLRSYMPITGVTFL 399 Query: 390 IGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVK 449 IG L++ +PP F S+ + P+ ++ +T GL + Sbjct: 400 IGTLSLCGVPPFACFWSKDEILADAWHK-----------LPVLGLLAWLTAGLTAFYMFR 448 Query: 450 MYGITFCGAPRSTHAE------------------------------------EAQEVPNT 473 MY ITF G R + + E N Sbjct: 449 MYFITFEGTFRGSSLISNKSSKQTLSVNKMDSVFALSNQTKDNTSLKASKHLDPHESSNA 508 Query: 474 MIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSL 533 M + +++L +LI + L + T + ++ + L T Sbjct: 509 MTIPLIVLTIPTILIGFIGAPLPNGL---------TGSSLLSHWLYLDNTEIVELSTNGW 559 Query: 534 LLLLLLAMP----LLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRV 589 + A+P + G + W R + ++ PS G L Sbjct: 560 TEFAITALPSVSIGILGAFIAWIVYGPHVDRLKNNPV--------SIDPSAEGWTGILLN 611 Query: 590 VFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVS----ATQRLAKEIQ 645 R +D ++ T + + ++D+ I IV+ T + + Sbjct: 612 SIYNWSLRRAYIDEIY--DQTFVWATRSSANALAWFDQWTIDGIVNVGGLFTLLGGEGTR 669 Query: 646 HLQSGDFRLYCLYVVAALVVLLIAIAV 672 + +SG Y + LV ++IA + Sbjct: 670 YTESGRTSAYIFVLGIGLVFVMIAAVL 696 >UniRef50_B1ZRS2 Proton-translocating NADH-quinone oxidoreductase, chain L n=3 Tax=Verrucomicrobia RepID=B1ZRS2_OPITP Length = 622 Score = 313 bits (801), Expect = 2e-83, Method: Composition-based stats. Identities = 134/461 (29%), Positives = 223/461 (48%), Gaps = 34/461 (7%) Query: 72 DLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVM 131 L + D L+A M+ V+ ++ ++S YMRE K G ++IF+ SM+ + V Sbjct: 72 PLGFKFDDLAALMLFVVGVVGFFIHVFSFGYMREDTAKARYFGG--LSIFMFSMIGITVA 129 Query: 132 DNAFWFIVLFEMMSLSSWFLVIARQDKT-SINAGMLYFFIAHAGSVLIMIAFLLMGRESG 190 DN F V +E++ SSW L+ ++ + A F + G ++ + G Sbjct: 130 DNLFMMFVFWELVGFSSWLLIGHWHERPSASAAAKKAFIVNRVGDFGFLLGIAMCYWVHG 189 Query: 191 SLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASAL-MSGV 249 ++ + + + + + LL F G K+ MPL WLP A P+ SAL + Sbjct: 190 TVTLSELDGVQ---PVGALLPLLLFCGAVGKSAQMPLQVWLPDAM-EGPTPVSALIHAAT 245 Query: 250 MVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTV 309 MV GI+ + ++ + ++ + ++M +G +AL L A+ + DIK++LA+ST+ Sbjct: 246 MVAAGIYMLCRINVLMVPEA------LTVIMWVGTATALYAALCAIVQSDIKKVLAYSTL 299 Query: 310 ENVGIILLAVGVAMVG-----LSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIIS 364 +G ++ A G+ + ++ G+ A+FHL+ HA FK LLFLG+G++I Sbjct: 300 SQLGYMVAAFGLGSLAERHEMGGAVHEIVIAAGVGAAMFHLVTHAFFKALLFLGSGSVIH 359 Query: 365 RL-HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAV 423 H D+ KMG L KRMP T A IG LAI +P L GF S+ + + Sbjct: 360 GCHHEQDIFKMGGLVKRMPVTFATFTIGVLAIIGMPGLAGFFSKDAILLLAYQKNAA--- 416 Query: 424 ALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAA 483 V+LA T L V+++ ITF GAPRS HAE A E + + + +++LAA Sbjct: 417 --------VFVVLAFTAILTACYMVRVWKITFFGAPRSEHAEHAHESGSVLTMPLIVLAA 468 Query: 484 LCVL---IALSASWLAPKIMHIAHAFTNTPPATVASGIALV 521 L +L I L + + A +T + + +A++ Sbjct: 469 LAILGGYIGLYPDVFTGVLDLVPEAHGSTHTTILLTSLAVM 509 >UniRef50_C4UKF4 NADH dehydrogenase (Quinone) n=1 Tax=Yersinia ruckeri ATCC 29473 RepID=C4UKF4_YERRU Length = 579 Score = 313 bits (801), Expect = 2e-83, Method: Composition-based stats. Identities = 191/478 (39%), Positives = 287/478 (60%), Gaps = 11/478 (2%) Query: 1 MDALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTL 60 M LLT +L+L+L + + L+ +++ +SG+ V + GI++ L AG Sbjct: 1 MHPASLLTLALVLWLLSGIVGWLLVDRVKVSSLISGLGGAVASLAGILAATQLLLAGTAQ 60 Query: 61 VARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNI 120 R + L+A ++L IS+ + CSLYS ++ A G ++ Sbjct: 61 QIR----LPLVHFSAEFSRLNALLLLAISVTSLFCSLYSCAWLANTHRCQRARTGLLCHL 116 Query: 121 FIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMI 180 +A++ A ++ NA I++ E+ +L ++FL++ D+ S A + F G++ +++ Sbjct: 117 LMAALTAAVISANAVELILMMELAALCAYFLILQADDEKSRRAALNQFLSGRFGTISLIL 176 Query: 181 AFLLMGRESGS-----LDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAH 235 AF ++ SGS L F S R S G+ S FLLA GFG AG++PLH+W+P++H Sbjct: 177 AFAVLHYASGSQGFDSLSFESLRHTEFSGGVKSVAFLLALIGFGLYAGIIPLHAWVPQSH 236 Query: 236 PAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYAL 295 +AP+HA+AL S ++K+GI G++K+ +DLL PLWWG++V+ + ++A LG LYAL Sbjct: 237 SSAPAHAAALFSSALMKVGILGVIKIGLDLLGAP--PLWWGVVVLLLAILTAFLGGLYAL 294 Query: 296 AEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLL 355 E DI+RLLA+ T+ENVGIILL +G AMVG++L P L + LL LFHL NH LFK L Sbjct: 295 MEHDIRRLLAYHTLENVGIILLGIGGAMVGVALKRPELASLALLAGLFHLFNHGLFKTTL 354 Query: 356 FLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLF 415 FLGAG + + DMEK+G +A RMPWT A LI ++++A+PPLNGF SEW +QSLF Sbjct: 355 FLGAGEVELQTGIKDMEKLGGIAYRMPWTTIAMLIALMSMAALPPLNGFASEWLLYQSLF 414 Query: 416 SLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNT 473 LS +L GP+ V LA+TG LA+MC K++G+TF G PRS A +A + + Sbjct: 415 QLSSSPMFITRLLGPLLAVGLALTGALALMCIAKVFGVTFLGTPRSQAASDATQSGSV 472 >UniRef50_Q67KP4 NADH dehydrogenase I subunit L n=1 Tax=Symbiobacterium thermophilum RepID=Q67KP4_SYMTH Length = 685 Score = 312 bits (800), Expect = 3e-83, Method: Composition-based stats. Identities = 155/709 (21%), Positives = 277/709 (39%), Gaps = 63/709 (8%) Query: 1 MDALQLLTWSLILYLFASLASLFLL-GLDRLAIKLSGITSLVGGVIGIISGITQLHAG-- 57 MD W + A A + + G+ R + G ++ + + + + A Sbjct: 1 MDFFLNTAWVIAALPLAVSALIAMFAGVLRDRAWIPGTVGMLITFLWSVGVLAAVIADPG 60 Query: 58 ------VTLVARFAPPFEFADLT-------LRMDSLSAFMVLVISLLVVVCSLYSLTYMR 104 V + F++A ++D+L+A M+ +I+L+ V YS YM Sbjct: 61 HGGEVLYNTVPAWKASFDWASFGPYTVRMGFQVDNLTALMLPMITLVSVCVQYYSSAYM- 119 Query: 105 EYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAG 164 + K +N+F +M+ L++ DN F +V +E+M L S+ L+ ++ G Sbjct: 120 -HGDKRIPRFYAALNLFTMAMLVLVMADNLFLLLVAWEIMGLCSYLLIGHWYEQAWPRYG 178 Query: 165 -MLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRTL-------SLSPGLASAVFLLAFF 216 + F G + +M+ ++ + L +A + L + L F Sbjct: 179 QIKAFLTTRVGDIGMMVGIFIVFFAARDLTWAGLAEKVPVLVQDPATASLLALGAFLLFT 238 Query: 217 GFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWG 276 G K+ PLH+WLP A ++ + + MV G++ + + M +P W Sbjct: 239 GAIGKSAQFPLHTWLPDAMAGPTPGSAIIHAATMVAAGVYLVGRAFMIF---GHVPAWVL 295 Query: 277 ILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVV 336 ++V +GA ++L A DIK +LA+ST+ +G +++A+G+ Sbjct: 296 VVVTFVGAFTSLFAASIATLRWDIKEVLAYSTISQLGYMIMAMGLG-------------- 341 Query: 337 GLLGALFHLLNHALFKGLLFLGAGAIISRLHT-HDMEKMGALAKRMPWTAAACLIGCLAI 395 G FHLL HA FK LLFL AG++I H + KMG L K++P T ++G A+ Sbjct: 342 GWTAGNFHLLTHAFFKALLFLAAGSVIHAHHHNQLLHKMGGLRKKIPITFWTWMVGYAAL 401 Query: 396 SAIPPLNGFISEWYTWQSLFS-LSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGIT 454 + IP +GF S+ + + + A + M T L + + Sbjct: 402 AGIPGFSGFFSKDELLLAALEWHNPLVATWPIWLQKLPFAMALTTAFLTAYYMTRATYLA 461 Query: 455 FCGAPRSTHA-EEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPAT 513 F G PR H E+A E P M + +++LA L WL + + FTN Sbjct: 462 FFGEPRDMHLYEQAHESPKAMTIPLIILAVPAALYG----WLGTPLF---NHFTNLDWMV 514 Query: 514 VASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWE 573 +PG H + L++ +A +L T AW + Sbjct: 515 FIQNFLHLPGLEHHVEFSTELMVTGMATAAGLLGIFLGWYLYAVVRPETRAAWIARFRPV 574 Query: 574 NAMAPSGNGVMQPL----RVVFSALFRLRQQLDPTL--RLNKGLAHVTARAQSTEPFWDE 627 + + V + AL R D + L ++ A ++D+ Sbjct: 575 YTLVRNKYYVDEFYDLVAVKTTEALSRAVAWFDLNVVDGLVNLSGTLSVYASEAAAWFDK 634 Query: 628 RVIRPIVS----ATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLIAIAV 672 V+ +V+ + L + L +G + Y + LV ++ + V Sbjct: 635 HVVDALVNMWADIARALGAAFRRLSTGYVQQYMFTFLVMLVASVVLVQV 683 >UniRef50_B3Q7M3 Proton-translocating NADH-quinone oxidoreductase, chain L n=3 Tax=Rhodopseudomonas palustris RepID=B3Q7M3_RHOPT Length = 697 Score = 312 bits (800), Expect = 3e-83, Method: Composition-based stats. Identities = 138/660 (20%), Positives = 241/660 (36%), Gaps = 73/660 (11%) Query: 28 DRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAPPFEFADL----TLRMDSLSAF 83 RLA ++ L+ + ++ + P +L LR+D+L+A Sbjct: 81 SRLAEIVTTTLLLISCALSWVTLVEVGFMHHDSRVALLPWINSGELQVAWALRVDTLTAV 140 Query: 84 MVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEM 143 M++V++ + + LYS+ YM E + ++++F +M+ L+ DN +E Sbjct: 141 MLVVVTTVSSLVHLYSIGYMHEDPHR--PRFFGYLSLFTFAMLMLVTADNLLQLFFGWEG 198 Query: 144 MSLSSWFLVIARQDKTSIN-AGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRTLSL 202 + L+S+ L+ K S N A + F + G ++ + GS DF + + + Sbjct: 199 VGLASYLLIGFWYQKPSANAAAIKAFVVNRVGDFGFLLGIFTIFVLVGSTDFDTIFSAAP 258 Query: 203 S------------PGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASAL-MSGV 249 S + L+ F G K+ LH+WLP A P+ SAL + Sbjct: 259 SLTGKTINFFGWHADALTLACLMLFMGAMGKSAQFLLHTWLPDAM-EGPTPVSALIHAAT 317 Query: 250 MVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTV 309 MV G+F + +++ L +VM GA +A L + DIKR++A+ST Sbjct: 318 MVTAGVFMVARMSPLF----ELAPNAQAVVMFFGATTAFFAATIGLVQNDIKRIVAYSTC 373 Query: 310 ENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRL-HT 368 +G + +A+G + +FHL HA FK LLFLGAG++I + H Sbjct: 374 SQLGYMFVAMGAGAYSV--------------GMFHLFTHAFFKALLFLGAGSVIHAMHHE 419 Query: 369 HDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLA 428 D+ MG L R+P+T LIG LA++ P G+ S+ ++ F A Sbjct: 420 QDIRNMGGLKDRIPFTYGVMLIGTLALTGFPLTAGYFSKDAIIEAAFVSKNPLAFY---- 475 Query: 429 GPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRS-THAEEAQEVPNTMIVAMLLLAALCVL 487 +M V L ++ TF G P H E A E P M + + +LA + Sbjct: 476 ---GFLMTVVAALLTSFYSWRLVFKTFHGEPHDRKHYEAAHESPLVMTIPLFVLAFGALA 532 Query: 488 IALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGL 547 L + S + + P + LL + ++ G Sbjct: 533 AGYPFKELFA---------GHGIEEFFRSSLKMHPHIIEEMHHIPAWIALLPTVMMVVGF 583 Query: 548 YWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRL 607 W R A + L + + + Sbjct: 584 LVSWFFYIRRPDIPVELA----------------SQHRLLYQFLLNKWYFDELYEIIFVR 627 Query: 608 NKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLL 667 + D I + + + + +Q+G Y ++ + L+ Sbjct: 628 PAKWIGRQLWKKGDGLLIDGFGPDGISARVLDVTRGVVRMQTGYLYHYAFAMLIGVAGLI 687 >UniRef50_C5VLQ3 NADH dehydrogenase subunit 5 n=10 Tax=Bacteroidales RepID=C5VLQ3_9BACT Length = 684 Score = 311 bits (798), Expect = 5e-83, Method: Composition-based stats. Identities = 145/638 (22%), Positives = 249/638 (39%), Gaps = 95/638 (14%) Query: 72 DLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEG--------KGAAAMGFFMNIFIA 123 ++ R+ +S M++VI+ + ++ +YS YM E + G ++++F Sbjct: 99 NIGFRLSPISVMMLIVITTVSLMVHIYSFGYMAERDENYKFEEYEHGFQRFYAYLSLFTM 158 Query: 124 SMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDK-TSINAGMLYFFIAHAGSVLIMIAF 182 SM+ L+V N F + +E++ + S+ L+ K T+++A F + + +I Sbjct: 159 SMLGLVVATNIFQMYLFWELVGVCSYLLIGFYYPKHTAVHASKKAFIVTRFADLFFLIGI 218 Query: 183 LLMGRESGSLDFA---------SFRTLSLSPGLASAV---FLLAFFGFGAKAGMMPLHSW 230 L G+ ++ + L+ +P L + L F G K+ M PLH W Sbjct: 219 LFFSFYVGTFNYDLNVNPGLVETLNGLAKNPHLTWVLPTALFLMFIGGAGKSAMFPLHIW 278 Query: 231 LPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALL 289 LP A P+ SAL + MV G+F + + + + I A +A Sbjct: 279 LPDAM-EGPTPVSALIHAATMVVAGVFQVASLLPIYVQFGAQEQL--HWIAWIAAFTAFY 335 Query: 290 GVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMV------GLSLHDPLLTVVGLLGALF 343 A A++DIKR LA+ST+ + +L+A+GV S +G + A+F Sbjct: 336 AAAVACAQRDIKRGLAFSTISQIAYMLVALGVCFYEKEHGSFYSAEYLHHGGLGYMAAMF 395 Query: 344 HLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNG 403 HL HA+FK LLFL +GAII + ++ E MG L K MP T LIGCLAI+ IPP G Sbjct: 396 HLFTHAMFKALLFLCSGAIIVIIGSNFKEYMGGLHKYMPITNICFLIGCLAIAGIPPFAG 455 Query: 404 FISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCG----AP 459 F S+ + +L VE AL+ ++ + G+ ++Y + F G Sbjct: 456 FFSKDEIISACNALPGVEGQALK-------WIMTLVAGMTAFYMFRLYYVIFWGESYYEQ 508 Query: 460 RSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIA 519 + QEVP M ++ LA + + ++ Sbjct: 509 DPENRRRPQEVPFVMWGPLVFLAIISITAGWIP---------------------FGHFVS 547 Query: 520 LVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPS 579 ++ + S+ ++A + L ++ Sbjct: 548 ANGLSYDIHIDRSIATTSIIAALIGFALATWMYAGKKQP--------------------- 586 Query: 580 GNGVMQPLRVVFSALFRL---RQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSA 636 V L+ F L + R +D + + F D VI + Sbjct: 587 ---VADALQRTFPRLHKAALNRFYIDNAWQFFTHKIVFRCFSIPIAWF-DRHVIDGTFNF 642 Query: 637 TQR----LAKEIQHLQSGDFRLYCLYVVAALVVLLIAI 670 + I+ QSGD R Y ++ + V L + + Sbjct: 643 MAWGTQEAGESIRSWQSGDVRQYAVWFITGTVALTLVL 680 >UniRef50_Q52978 Probable K(+)/H(+) antiporter subunit A/B n=110 Tax=Bacteria RepID=PHAAB_RHIME Length = 999 Score = 311 bits (797), Expect = 5e-83, Method: Composition-based stats. Identities = 127/548 (23%), Positives = 233/548 (42%), Gaps = 34/548 (6%) Query: 3 ALQLLTWSLILYLFASLASLFLLGLDRLAI-KLSGITSLVGGVIGIISGITQLHAGVTLV 61 A +LL+ +++ SL ++F R AI +G +LV ++ GV Sbjct: 28 AEKLLSVFILVPFAGSLIAIFFPSDQRGAISWFAGAIALVCFLVTAGLYPYVASGGVLHY 87 Query: 62 ARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIF 121 P + TLRMD + +I+ + V+ +LY+ YM E + F Sbjct: 88 RIDWVPELGLNFTLRMDGFAWLFSALITAIGVLVALYARYYMAEEDP--VPRFFALFLAF 145 Query: 122 IASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKT-SINAGMLYFFIAHAGSVLIMI 180 + SM+ +++ N V +E+ S+ S+ L+ + + + I G + + + Sbjct: 146 MGSMLGVVLSGNLILLAVFWELTSIVSFLLIGYWHHNAHARDGARMALTITGTGGLAMFV 205 Query: 181 AFLLMGRESGSLDFASFRTLS---LSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPA 237 +++G+ GS + + + L V +L G K+ P H WLP A A Sbjct: 206 GLIIIGKIVGSYELDAVLASGDAIRNHPLYGTVLVLVLLGALTKSAQFPFHFWLPHAM-A 264 Query: 238 APSHASA-LMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALA 296 AP+ SA L S MVK G+F +++ + W +V G + LLG +A+ Sbjct: 265 APTPVSAYLHSATMVKAGVFLLVRFWPVMAGTEA----WFWIVGLAGLTTLLLGAYFAIF 320 Query: 297 EQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLF 356 +QD+K LLA+ST+ ++G+I + + + + + + A+FH++NHA FK LF Sbjct: 321 QQDLKGLLAYSTISHLGLITVLLSLG-----------SPLAAVAAVFHIVNHATFKASLF 369 Query: 357 LGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFS 416 + AG I T D+ ++G L MP TA ++ A++ +P LNGF+S+ + Sbjct: 370 MAAGIIDHESGTRDIRRLGGLFHFMPITATLAMVASAAMAGVPLLNGFLSKEMFFAEAIE 429 Query: 417 LSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIV 476 V + + + + G AV ++ F G P + + E P M Sbjct: 430 THLVNPL-----DTVTPYVATIAGMFAVTYSLRFIHGVFFGRPPADLPRKPHEPPRWMRA 484 Query: 477 AMLLLAALCVLIALSA-----SWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTP 531 + L C+++ + +L ++ + T +V G + ++ Sbjct: 485 PLDFLVLACLVVGIIPAQTIGPFLHTAVLSVLREGTPDYSLSVWHGWNIPLIMSFVALSG 544 Query: 532 SLLLLLLL 539 + L L+ Sbjct: 545 GIGLYFLM 552 >UniRef50_C5A3D6 Formate hydrogenlyase I subunit D (Mhy1D) n=2 Tax=Thermococcus RepID=C5A3D6_THEGJ Length = 664 Score = 311 bits (796), Expect = 8e-83, Method: Composition-based stats. Identities = 161/605 (26%), Positives = 267/605 (44%), Gaps = 45/605 (7%) Query: 7 LTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAP 66 L +++I ++ + + L+ R+++K S + +G + L + Sbjct: 3 LEYAIIAFIIGGV--IGLVRDYRVSVKASSFMAFLG-------SLALLGEVYHVYTNGPE 53 Query: 67 PFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGA-AAMGFFMNIFIASM 125 F + + + LS +L+I ++ V SL+++ YM +E G N F+ASM Sbjct: 54 MFSLFGIPMNVSGLSNVFLLIIGIVGVAASLFAINYMDLFEKTGKGWVYAIAYNTFLASM 113 Query: 126 VALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVL-IMIAFLL 184 ++ +D+ +F++ +E+M+LSS+ LV + +NA + Y+ H + + +A Sbjct: 114 TLVVTVDSMEYFVMSWELMTLSSFILVFFSEKARDVNASVKYYITMHFLDTIPLFLALGT 173 Query: 185 MGRESGSLD---FASFRTLSLSPGLASAVFL-LAFFGFGAKAGMMPLHSWLPRAHPAAPS 240 G+ + F + + + VF L F AKAG+ P W+ + AAPS Sbjct: 174 AYSLIGNFEELTFENIGAALSTHHTSRLVFAGLLMIAFTAKAGLFPFSFWVAETYRAAPS 233 Query: 241 HASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDI 300 H SA+M+G M K+ ++GIL + G+ GI+V G I+ LYAL E + Sbjct: 234 HVSAIMAGAMEKMALYGILALVWK---TAGIEGDAGIIVALAGMITITYATLYALRENNA 290 Query: 301 KRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLT--VVGLLGALFHLLNHALFKGLLFLG 358 KRLLA+S++ +G I L +G+ MV + L T +G LFH LNHA+FK LFL Sbjct: 291 KRLLAYSSISQMGYIWLGIGIGMVLVPKGGFLGTIGALGAFAGLFHALNHAIFKASLFLS 350 Query: 359 AGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLS 418 AGA+ R T D+ ++G L +RM +TA A L LAIS +PP NGFIS+W + S +S S Sbjct: 351 AGAVEYRTGTVDLNELGGLGRRMKFTALAALFASLAISGVPPFNGFISKWLIYVSGYSSS 410 Query: 419 RVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAM 478 V+ + +K YG F G + E +EVP M++ Sbjct: 411 NP-------LLIFGAVLAVFFSAGTLAYSMKFYGAQFGGEMK--RYENVEEVPAGMLLGQ 461 Query: 479 LLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLL 538 +LA L ++I + + P + +A + G L + Sbjct: 462 WILAGLTLIIGVFPRIVVPILNEPFNAPLTENIYRIGFGSVLFSP--------------V 507 Query: 539 LAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPS--GNGVMQPLRVVFSALFR 596 + + LL L + + F + W CG + G + +R Sbjct: 508 IFVILLGALAAALYLTFKPEFGKETKPWDCGSTEIDEDEYRTNAEGYYNWYEKKIGSFYR 567 Query: 597 LRQQL 601 L Sbjct: 568 LGDWF 572 >UniRef50_Q28T51 Proton-translocating NADH-quinone oxidoreductase chain L n=270 Tax=cellular organisms RepID=Q28T51_JANSC Length = 711 Score = 311 bits (796), Expect = 8e-83, Method: Composition-based stats. Identities = 122/453 (26%), Positives = 196/453 (43%), Gaps = 58/453 (12%) Query: 70 FADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEG-----KGAAAMGFFMNIFIAS 124 F D +R+D L+A M++VI+ + + LYS YM E +++ F + Sbjct: 69 FTDWAIRVDRLTAIMLIVITSVSALVHLYSFGYMAHDENFKEGESYRPRFFAYLSFFTFT 128 Query: 125 MVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSI-NAGMLYFFIAHAGSVLIMIAFL 183 M+ L+ DN +E + ++S+ L+ K S A M F + G ++ Sbjct: 129 MLMLVTADNLLQLFFGWEGVGVASYLLIGFYFRKPSAGAAAMKAFIVNRVGDFGFLLGIF 188 Query: 184 LMGRESGSLDFASFRTLSLSPGLASAVFL------------LAFFGFGAKAGMMPLHSWL 231 + + S+ F + S +FL L F G K+ + LH WL Sbjct: 189 ALFWMTDSIQFDVVLGMGAELAEMSIIFLGMELNAAETIAFLLFIGAMGKSAQLLLHVWL 248 Query: 232 PRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLG 290 P A P+ SAL + MV G+F + +++ G ++ IGA+SA + Sbjct: 249 PDAM-EGPTPVSALIHAATMVTAGVFLVCRMS----PVIEYAPLAGNFIIIIGALSAFVA 303 Query: 291 VLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHAL 350 L + DIKR++A+ST+ +G + +A GV + + A+FHLL HA Sbjct: 304 ATIGLVQNDIKRVIAYSTMSQLGYMFVAAGVGVYSV--------------AMFHLLTHAF 349 Query: 351 FKGLLFLGAGAIISRL-HTHDMEKMGALAKRMPWTAAACLIGCLAI--SAIP-------- 399 FK +LFLGAG++I + H DM G L K++P+T A +IG LAI IP Sbjct: 350 FKAMLFLGAGSVIHAMHHEQDMRNYGGLRKKIPYTFWAMMIGTLAITGVGIPLLYVGFPV 409 Query: 400 PLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAP 459 GF+S+ +S ++ G A L + ++ +TF G Sbjct: 410 GFAGFVSKDAVIESAYAFGGD-------LGQFAFWALVIGALFTSFYSWRLMFLTFYGEA 462 Query: 460 RSTH--AEEAQEVPNTMIVAMLLLAALCVLIAL 490 R E A E P TM++ + LA V+ + Sbjct: 463 RGNKHTHEHAHESPMTMLIPLGALAIGAVVAGM 495 >UniRef50_B6YQ51 NADH dehydrogenase I subunit L n=32 Tax=Bacteroidetes RepID=B6YQ51_AZOPC Length = 637 Score = 310 bits (795), Expect = 1e-82, Method: Composition-based stats. Identities = 141/617 (22%), Positives = 250/617 (40%), Gaps = 85/617 (13%) Query: 71 ADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLV 130 +L + +D +S M++VI+ + ++ +YSL YM+ G F+++F SM+ L+V Sbjct: 82 INLGVLLDPISVMMLVVITTVSLMVHIYSLGYMKGEIG--FQRYYAFLSLFSFSMLGLVV 139 Query: 131 MDNAFWFIVLFEMMSLSSWFLVIARQ-DKTSINAGMLYFFIAHAGSVLIMIAFLLMGRES 189 N F + +E++ +SS+ L+ +++ A F + + +I L++ + Sbjct: 140 ATNIFQMYIFWELVGVSSYLLIGFYYIKPSAVAASKKAFIVTRFADLGFLIGILILSYYT 199 Query: 190 GSLDFASFRTLS-------------LSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHP 236 + DF + + L ++ L F G K+ M PLH WLP A Sbjct: 200 RTFDFRALTANNAVLVTASTAGRTFLGLSVSVWALALIFMGGAGKSAMFPLHIWLPDAM- 258 Query: 237 AAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYAL 295 P+ SAL + MV G++ I ++ L ++ +GA ++ + A+ Sbjct: 259 EGPTPVSALIHAATMVVAGVYLITRLFPVYFFAAPSVL---KMIAFVGAFTSFFTAIIAV 315 Query: 296 AEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLL 355 + DIKR+LA+ST+ + ++ A+GV+ G +G ++FHL HA FK LL Sbjct: 316 VQTDIKRVLAFSTISQISYMMAALGVSKYGGYEG------LGYTASMFHLFTHAFFKALL 369 Query: 356 FLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLF 415 FLGAG++I +++++M M L K MP T LI CLAI+ IPP +GF S+ + Sbjct: 370 FLGAGSVIHVVNSNEMNNMCGLHKYMPITNITFLIACLAIAGIPPFSGFYSKDEVLVATL 429 Query: 416 SLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFC-GAPRSTHAEEAQEVPNTM 474 PI +L V GL ++Y F G + + E P M Sbjct: 430 H-----------YQPIIFWILWVVAGLTAFYMFRLYFCIFWNGEKKYDIYHASHESPFLM 478 Query: 475 IVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLL 534 I +++L+ V L V+S + + V + Sbjct: 479 IFPLVILSVFSVFGGLIP-----------------FANFVSSDNISLHTHINWTVASMSV 521 Query: 535 LLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSAL 594 ++ + + + LY + + R A CG V L Sbjct: 522 MIAVFGIGIAAFLYL------KDSGRPAKIAQFCG--------------------VLYKL 555 Query: 595 FRLRQQLDPTLRLNKGLAHVTARAQSTEPF---WDERVIRPIVSATQRLAKEIQHLQSGD 651 + D +S + F + + + QR + ++ LQSG Sbjct: 556 ILHKFYWDEIWMWMTKRVIFQFICESVKWFDRHIIDWSMNGLAWTIQRFSLSVKGLQSGH 615 Query: 652 FRLYCLYVVAALVVLLI 668 + Y ++ L ++ I Sbjct: 616 VQFYMWIFISGLTLITI 632 >UniRef50_A9B6Y2 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B6Y2_HERA2 Length = 683 Score = 310 bits (795), Expect = 1e-82, Method: Composition-based stats. Identities = 139/668 (20%), Positives = 246/668 (36%), Gaps = 84/668 (12%) Query: 30 LAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAPPFEFADLTLRMDSLSAFMVLVIS 89 + ++ + L+G G VT A +D LS M+L+++ Sbjct: 74 FVLTVATLIELLGMPAKTTLGENNRWFDVTYWNWMAFGDLEVPFGFLIDQLSVTMMLLVT 133 Query: 90 LLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSW 149 + + LY++ YM E ++N+FI +M+ L++ +N + +E + L S+ Sbjct: 134 GVGTLIHLYAVGYMSHDE--RPTRFFVYLNLFIVAMLMLVMGNNFVMLFLGWEGVGLCSF 191 Query: 150 FLVIAR-QDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRES--------GSLDFASFRTL 200 L+ + + A + F G +++A + + SL F Sbjct: 192 LLIGFWFEQRDPPWASVKAFVTNRVGDFGLLMAMFAIWALARKPDGTFLHSLVFREVLEQ 251 Query: 201 SLSPGL--------------ASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASAL- 245 L A A+ + G K+ +PL WLP A A P+ SAL Sbjct: 252 GTVFSLQQYSTFFMGTQYTAAGAIAFMLLLGVTGKSAQIPLFVWLPDAM-AGPTPVSALI 310 Query: 246 MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLA 305 + MV G++ +++ L V IG +AL+ AL + DIK++LA Sbjct: 311 HAATMVTAGVYLMIRTHPIF----ELSPAVQSSVTFIGVATALVAASIALGQYDIKKVLA 366 Query: 306 WSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISR 365 +STV +G ++ AVG+ + A+FHLL H +FK LLFLG+G++I Sbjct: 367 FSTVSQLGFMVAAVGMG--------------AYVAAMFHLLTHGIFKALLFLGSGSVIHG 412 Query: 366 LH-THDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVA 424 DM KMG L K+MP T ++G + + P ++GF S+ F Sbjct: 413 FGNEQDMRKMGGLRKKMPVTFWTYIVGTMGLIGFPLVSGFWSKDEIIGHAFDHDHRT--- 469 Query: 425 LQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAAL 484 ++L + L + + F G R H A E M + + +LA L Sbjct: 470 -------VGMLLILGAVLTSFYMGRQISMVFFGEQRDQHI-HAHESSRWMTIPLAILAVL 521 Query: 485 CVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLL 544 + L + + A FH + + +L L + Sbjct: 522 TLASGLINIVVLHPLTTWLEPIVEEEAAK-----------FHLNIAAIVTILGLASFAAG 570 Query: 545 PGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPT 604 LY + +R + G + + + F AL+ Sbjct: 571 FYLYNWAAKHKRIKPNQRDLLHHWGGDFYAILEE---------KWGFDALY-------NA 614 Query: 605 LRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALV 664 + + A + + + + ++ + ++ QSG R Y L V +V Sbjct: 615 VLVKPYKALASFFGKFFDVKIIDGIVNGTAELVGLSGRGLRTFQSGYVRSYALMFVIGVV 674 Query: 665 VLLIAIAV 672 ++L A+ Sbjct: 675 IVLGFFAL 682 >UniRef50_UPI00016C46D7 NADH dehydrogenase I chain L n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C46D7 Length = 652 Score = 310 bits (794), Expect = 1e-82, Method: Composition-based stats. Identities = 143/621 (23%), Positives = 244/621 (39%), Gaps = 52/621 (8%) Query: 61 VARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNI 120 V FA T+ +D LSA M+ +I+ + +L++ YM + G A M++ Sbjct: 69 VTWFAAGHLNVRFTIAVDPLSAMMLSMITFIATWIALFASGYM--HGDGGFARFFAVMSL 126 Query: 121 FIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSIN-AGMLYFFIAHAGSVLIM 179 F+ SM L++ +N + +E + L S+ LV +K S A F + G + Sbjct: 127 FVFSMCGLVLANNFLLLVAFWEGVGLCSYLLVGYYFEKPSAATAARKAFLVTRIGDTGFL 186 Query: 180 IAFLLMGRESG-----SLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRA 234 + L+ + G +L F + + LL F G K+ PL+ WLP A Sbjct: 187 LGIFLLWKLGGWHTDLNLLFDHIQRHPPEQWQLTTACLLLFCGAVGKSAQFPLYVWLPDA 246 Query: 235 HPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLY 293 P+ SAL + MV G++ + + + I+V +G I+A+L Sbjct: 247 M-EGPTPVSALIHAATMVTAGVYLLARCSPLFAMAPDAQ----IVVSWVGGITAILAAFI 301 Query: 294 ALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKG 353 ALA+ D+KR+LA+STV +G + LA+G + ++ A+FHL HA FK Sbjct: 302 ALAQTDLKRVLAYSTVSQLGFLFLALGT-------SGTIDPKFAVVAAMFHLFTHAFFKA 354 Query: 354 LLFLGAGAIISRLHTH-DMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQ 412 LLFL AG+++ + D+ + G L K MP T L G A++ +P L+GF S+ + Sbjct: 355 LLFLAAGSVMHGMGGVIDVRQFGGLRKVMPITHLTFLCGAGALAGVPLLSGFWSKDLILE 414 Query: 413 SLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAE--EAQEV 470 SL S + + +V T L + Y +TF G + H A E Sbjct: 415 SLLEASETGSRYTAGYFALFLVACT-TAFLTAFYTFRAYFLTFWGPEKIPHEAGHHAHES 473 Query: 471 PNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVT 530 P +M + +++LA + + A + + VP F+ + Sbjct: 474 PPSMTIPLVVLAVGALAVGAVVEPFTHWFSDFVGATQTIASSRGLTPAKEVPHHFNWVMA 533 Query: 531 PSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVV 590 L L + L LY + M + Sbjct: 534 GISAALALSGIGLAFVLYRNGGADKVPFG------------------------MNGVFKA 569 Query: 591 FSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSG 650 + + L ++V A + + + R I + Q L ++ +Q+G Sbjct: 570 SRDKLYVDELYGAVLVAP---SNVLAFLARVFDGFLDALTRLIAAIPQFLGHLVRPIQNG 626 Query: 651 DFRLYCLYVVAALVVLLIAIA 671 + Y L + + V L + Sbjct: 627 LVQFYALSMALGVAVFLTFVV 647 >UniRef50_Q1IZW2 NADH-quinone oxidoreductase, L subunit n=3 Tax=Deinococcus RepID=Q1IZW2_DEIGD Length = 639 Score = 309 bits (791), Expect = 3e-82, Method: Composition-based stats. Identities = 156/571 (27%), Positives = 231/571 (40%), Gaps = 71/571 (12%) Query: 16 FASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQL-HAGVTLVARFAPPFEF---A 71 FA L L R A L +T L V+ ++ + Q ++ + P Sbjct: 14 FALLILFPRLFPGRSAGWLGSLTVLASFVVAVLRYLGQTETPAHEVLWTWLPNMALNANL 73 Query: 72 DLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVM 131 + +D LSA M L+I+ + + +YS++YM FMN F+ M+ L++ Sbjct: 74 AVGFYLDQLSALMALIITGVGFLIHVYSISYMGHDPK--FVRFFAFMNFFVGMMLILVLA 131 Query: 132 DNAFWFIVLFEMMSLSSWFLVIARQDKTSINA-------------------GMLYFFIAH 172 D+ V +E + +S+ L+ + A F + Sbjct: 132 DSYPLMFVGWEGVGTASYLLIGFWFSGRNSEAPDRKLREASDREGVANSNAARKAFIMNR 191 Query: 173 AGSVLIMIAFLLMGRESGSLDFASFRTLSLSPGLASA----VFLLAFFGFGAKAGMMPLH 228 G + M+ L+ + G+L +A A L G K+G +PL Sbjct: 192 IGDLGFMLGMFLLYKLYGTLVIPELAGRVAGAQVAQAGIELACLFLLVGAVGKSGQLPLT 251 Query: 229 SWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISA 287 +WLP A A P+ SAL + MV G++ I + W V +GA++A Sbjct: 252 TWLPDAM-AGPTPVSALIHAATMVTAGVYLIARSHFLYDLAPTASTW----VAWVGALTA 306 Query: 288 LLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLN 347 L G L AL + DIK++LA+STV +G + LAVG+ +FHLL Sbjct: 307 LYGALSALNQHDIKKILAYSTVSQLGYMFLAVGL--------------HAYSAGVFHLLT 352 Query: 348 HALFKGLLFLGAGAIISRLH-THDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFIS 406 HA FK LLFL AGA+I LH D+ MG L MP+T A L+G LAI+ IP +GF S Sbjct: 353 HAFFKALLFLSAGAVIHALHEEQDVRAMGGLRTFMPFTHLAALMGVLAIAGIPIWSGFFS 412 Query: 407 EWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEE 466 + + F+ PI V+ L + Y + + G R H Sbjct: 413 KDAILATAFTAD-----------PILYVVGLGVALLTAFYMGRWYFLVWQGDYRG-HVAH 460 Query: 467 AQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFH 526 E M V + +LAAL P + HAF + +A + L P Sbjct: 461 PHEADGLMQVPLGILAALATFGGFLN---IPSFLGGNHAFDTS----LARALPLHP--HE 511 Query: 527 TQVTPSLLLLLLLAMPLLPGLYWLWCRSRRA 557 V+ LL LL + L GL W W RR Sbjct: 512 LPVSTEWLLTLLAVVAGLGGLLWAWTEHRRR 542 >UniRef50_B2ULN9 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2ULN9_AKKM8 Length = 610 Score = 309 bits (791), Expect = 3e-82, Method: Composition-based stats. Identities = 133/504 (26%), Positives = 232/504 (46%), Gaps = 37/504 (7%) Query: 34 LSGITSLVGGVIGIISGITQLHAGVTLVARFAPPFEF--ADLTLRMDSLSAFMVLVISLL 91 ++ +TS + + + L + + P + DL +D LS+ M+LV++ + Sbjct: 33 VAALTSTFSCLATFVLSLGLLDRTGSDSFSWLPISDISSVDLGFVLDPLSSRMMLVVTGI 92 Query: 92 VVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFL 151 ++ ++SL YM + + K +++F+ SM +++ +N + +E++ LSS+ L Sbjct: 93 GLLVHVFSLGYMADDKAK--TRYFACLSLFMFSMTGIVLANNIAMTFIFWELVGLSSYLL 150 Query: 152 VIARQDKT-SINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRT-LSLSPGLASA 209 + + + NA F G +I L + + +LDF+ +S L + Sbjct: 151 IGHWYTRDTAANAAKKAFICNRVGDFGFLIGILTLWALTNTLDFSLMEIPAGISENLLNI 210 Query: 210 VFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQ 268 L F G K+ PLH WLP A P+ SAL + MV G++ +++V + Sbjct: 211 TVLCLFCGAVGKSAQFPLHVWLPDAM-EGPTPVSALIHAATMVAAGVYMMVRVQYSI-GI 268 Query: 269 TGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSL 328 P ++ IGAI+A++ A + DIKR+LA+ST+ +G +++A+G+ Sbjct: 269 EAFPALACNVIAGIGAITAVIAAFMATQQNDIKRVLAYSTLSQLGYMVMALGL------- 321 Query: 329 HDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRL-HTHDMEKMGALAKRMPWTAAA 387 + A+FHL HA FK LLFLGAGAII H D+ KMG + KRM T+ Sbjct: 322 -------LAGEAAMFHLFTHAWFKALLFLGAGAIIFACHHEQDIWKMGGIMKRMKLTSLT 374 Query: 388 CLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCF 447 +I +A+ AIP +GF S+ ++ + P+ + A L Sbjct: 375 FIIATMALIAIPFTSGFFSKEAILEAALRKN-----------PVFFWIGAGVALLTTFYM 423 Query: 448 VKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVL--IALSASWLAPKIMHIAHA 505 +++ + F G RS +E A EV M+V +L+LA L ++ A L P ++ + Sbjct: 424 MRVIFVVFFGKSRSHSSEHASEVGGLMLVPLLILAVLALISGYGFIADRLVPFNGFVSES 483 Query: 506 FTNTPPATVASGIALVPGTFHTQV 529 F P V+ G ++ Sbjct: 484 FHMGMPFYVSMGALVLGILLAAAF 507 >UniRef50_Q3AH00 Proton-translocating NADH-quinone oxidoreductase, chain L n=6 Tax=Chroococcales RepID=Q3AH00_SYNSC Length = 669 Score = 309 bits (791), Expect = 3e-82, Method: Composition-based stats. Identities = 154/724 (21%), Positives = 273/724 (37%), Gaps = 113/724 (15%) Query: 1 MDALQLLTWSLILYLF--ASLASLFLLGLDRLAIKLSGITSLV-------GGVIGIISGI 51 M + + L W + + A L L L+ +R +L +L+ + Sbjct: 1 MPSAEELAWLIPVLPLFGAVLTGLGLISFNRTINRLRKPVALLLISCVGAAAALSYSILF 60 Query: 52 TQLHAGVTLVARF---APPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEG 108 QL+ + F + + +D L A M+ +++ + ++ +YS YM Sbjct: 61 NQLNGAPPVEHLFVWASAGSFILPMGYVVDPLGAVMLALVTTIALLVLVYSHGYMAH--D 118 Query: 109 KGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKT-SINAGMLY 167 KG ++ +F +SM+ L++ N V +E++ + S+ LV D+ + +A Sbjct: 119 KGYVRFFTYLALFSSSMLGLIISPNLLEIYVFWELVGMCSYLLVGFWYDRDGAAHAAQKA 178 Query: 168 FFIAHAGSVLIMIAFLLMGRESGSLDFAS--------FRTLSLSPGLASAVFLLAFFGFG 219 F + G +++ L + +GS DF +++P A + LL F G Sbjct: 179 FVVNRVGDFGLLLGILGLFWATGSFDFQGIADGLQNGLAAGTVAPWAALLLCLLVFMGPM 238 Query: 220 AKAGMMPLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGIL 278 AK+ PLH WLP A P+ SAL + MV G+F + ++ + + Sbjct: 239 AKSAQFPLHVWLPDAM-EGPTPISALIHAATMVAAGVFLVARLDPLYAQFPVVQ----TV 293 Query: 279 VMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGL 338 + +G I+ LG AL + D+K+ LA+STV +G ++LA+G Sbjct: 294 IAVVGTITCFLGASIALTQMDLKKGLAYSTVSQLGYMMLAMGCG--------------AP 339 Query: 339 LGALFHLLNHALFKGLLFLGAGAIISRLHT---------HDMEKMGALAKRMPWTAAACL 389 + +FHL+ HA FK +LFLG+G++I + DM MG L K+MP T+ Sbjct: 340 VAGIFHLVTHAFFKAMLFLGSGSVIHAMEEVVGHEPVLAQDMRLMGGLRKKMPVTSITFF 399 Query: 390 IGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVK 449 IGC+AIS IPPL GF S+ F+ P+ V+ +T G+ + Sbjct: 400 IGCIAISGIPPLAGFWSKDEILGQAFNSY-----------PLLWVVGFLTAGMTAFYMFR 448 Query: 450 MYGITFCGAPRST---------------------HAEEAQEVPNTMIVAMLLLAALCVLI 488 +Y +TF G R H E M + +LA VLI Sbjct: 449 LYFLTFEGEFRGNDTAMQAQLLSAAGKDPSEHHAHGGSVHESAWPMAAPLAVLAVPSVLI 508 Query: 489 ALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLY 548 L + + + + A S +P + + L + L + Sbjct: 509 GLLGTPWNSRFAGLLNPEEALEMAEHFSWGEFLPLASASVAISVAGITLAVLAYALRQID 568 Query: 549 WLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLN 608 + R + + L + Sbjct: 569 LGQLVAGRFPAMNA---------------------------FLANKWYLD--VVNEKLFV 599 Query: 609 KGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLI 668 +G + + + V+ T + +++L++G + Y L V A ++ L++ Sbjct: 600 RGSRKLAREVLEVDAKVVDGVVNLTGLLTLGSGEGLKYLETGRAQFYALIVFAGVIGLVV 659 Query: 669 AIAV 672 V Sbjct: 660 LFGV 663 >UniRef50_D0D447 NADH-quinone oxidoreductase subunit l n=65 Tax=cellular organisms RepID=D0D447_9RHOB Length = 762 Score = 308 bits (790), Expect = 3e-82, Method: Composition-based stats. Identities = 123/492 (25%), Positives = 213/492 (43%), Gaps = 57/492 (11%) Query: 28 DRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAPPFEFA-DLTLRMDSLSAFMVL 86 ++ A+ L+ + ++ I +T + + RF + D +R+D L+A M++ Sbjct: 25 EKGAMWLTTGLLFLAALLSWIVFLTLGESHTVTLFRFIESGTLSTDWAIRIDRLTAIMLI 84 Query: 87 VISLLVVVCSLYSLTYMREYEG----KGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFE 142 V++ + + LYS YM A ++++F +M+AL+ DN +E Sbjct: 85 VVTTVSALVHLYSFGYMAHDPQFEHTPYRARFFAYLSLFTFAMLALVTSDNLVQMFFGWE 144 Query: 143 MMSLSSWFLVIARQDKTSI-NAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDF------- 194 + L+S+ L+ K S A + F + G + + + S+ F Sbjct: 145 GVGLASYLLIGFYYKKPSAGAAAIKAFVVNRVGDFGFALGIFALYYLTDSIQFDQIFAEI 204 Query: 195 -----ASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASAL-MSG 248 L A+ + L F G K+ + LH+WLP A P+ SAL + Sbjct: 205 PRLAETQLHFLWTEWNAANLIAFLLFVGAMGKSAQLFLHTWLPDAM-EGPTPVSALIHAA 263 Query: 249 VMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWST 308 MV G+F + +++ + + + +GA +A + L + DIKR++A+ST Sbjct: 264 TMVTAGVFLVCRMSPLMEYAPQATAF----ITFLGATTAFVAATIGLVQNDIKRVIAYST 319 Query: 309 VENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRL-H 367 + +G + +A GV + + A+FHLL HA FK +LFLGAG++I + H Sbjct: 320 MSQLGYMFVAAGVGVYSV--------------AMFHLLTHAFFKAMLFLGAGSVIHAMHH 365 Query: 368 THDMEKMGALAKRMPWTAAACLIGCLAI--SAIP-----PLNGFISEWYTWQSLFSLSRV 420 DM GAL ++P T A +IG LAI IP GF+S+ +S ++ ++ Sbjct: 366 EQDMRNYGALRTKIPMTFWAMMIGTLAITGVGIPLTGWFGFAGFVSKDAIIESAWAGTQ- 424 Query: 421 EAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTH--AEEAQEVPNTMIVAM 478 G A ML + ++ +TF G R E A E P M++ + Sbjct: 425 --------GGYAFWMLVIAALFTSFYSWRLMFMTFYGKARGDKHTHEHAHESPRVMLIPL 476 Query: 479 LLLAALCVLIAL 490 +LA V + Sbjct: 477 GVLAVGAVFSGM 488 >UniRef50_B6YT76 Hydrogenase 4, component B or formate hydrogen lyase, subunit 3 n=1 Tax=Thermococcus onnurineus NA1 RepID=B6YT76_THEON Length = 659 Score = 308 bits (789), Expect = 4e-82, Method: Composition-based stats. Identities = 165/689 (23%), Positives = 317/689 (46%), Gaps = 55/689 (7%) Query: 6 LLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFA 65 ++ + LY ++++ L G + +IK+S + S + + + L G+ + F Sbjct: 1 MMEIPIALYSLSAISGLI--GDFKRSIKISSVLSAIASLSLLGIAAHALSRGLPVQESF- 57 Query: 66 PPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAA-AMGFFMNIFIAS 124 + L +DSLS + +I+LL +V S+YS++YM + G A F+ S Sbjct: 58 -----LGIPLIIDSLSLPFLFIIALLSLVVSVYSISYMEVHRDTGRPLAYTILYGTFVLS 112 Query: 125 MVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAG-SVLIMIAFL 183 +V + + N WF+ +E+M+L+S+ V R+ +AG+ Y +V + +A Sbjct: 113 IVFVALTSNLLWFVFFWELMTLTSFIFVSWREQ----DAGIKYLLTMQLANTVPLFVALG 168 Query: 184 LMGRESGSL--DFASFRTL--SLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAP 239 ++ +GS D+A+ R + SLSP ++ + F AK+G +P W+P A+ AAP Sbjct: 169 IIYSATGSFSVDYATLREVASSLSPVQLKLLYAMFLVTFLAKSGSVPFQFWVPDAYEAAP 228 Query: 240 SHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQD 299 S+ ++LM+GVM K+ ++G++++ + L + G +++ +G ++ G LYAL E Sbjct: 229 SNIASLMAGVMEKMAVYGLIRLLCNALPCSE---GIGYVLVIVGILTMTFGTLYALRETH 285 Query: 300 IKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGA 359 KRLLA+S+V +G I AVG+ M+ L++ L + L +FH NH LFKGLLFL + Sbjct: 286 AKRLLAYSSVGQMGYIWFAVGMGMIFLTMGMESLAYLAFLAGVFHSFNHTLFKGLLFLIS 345 Query: 360 GAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSR 419 G T D+ ++G L + MP+++ +IG L+++ +P +GF+S+W +Q+ + Sbjct: 346 GNFEYSAGTADLNELGGLRRAMPYSSLFTVIGALSLAGVPLFSGFLSKWMIYQAGYYSG- 404 Query: 420 VEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAML 479 VM + + +K+Y F G P + E A+EVP+ M++ Sbjct: 405 ------IGLFVFGSVMAVFMSAVTLAYSLKLYTSAFGGEP-NERTENAREVPSGMLLGEG 457 Query: 480 LLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLL 539 ++A + + + + P + + T + + + + + LLL + Sbjct: 458 IIALTSLAVGILPAIAYPILTISLNGGDVT--------VTMGSISTDFEYFSPIALLLAV 509 Query: 540 AMPLLPGLYWLWCRSRRAAFRRTG--------------DAWACGYGWENAMAPSGNGVMQ 585 + + + ++ TG D + + + G+ + Sbjct: 510 SFIAVASYFVFRPKTTNVKPWNTGALFLPEERYGAKARDYYRQYFTEMEGLYKLGSAAGK 569 Query: 586 PLRVVFSALFR----LRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLA 641 RV+ SAL L + L T R K + T + DE P++ + +A Sbjct: 570 VGRVLLSALMSVYLVLARGLVYTGREKKRSFTLDELRHRTVRYLDEAFFAPMMDLLKNIA 629 Query: 642 KEIQHLQSGDFRLYCLYVVAALVVLLIAI 670 + L+ ++ +++L + + Sbjct: 630 VLAAGISVSMDELFLASMLTTVIILALLV 658 >UniRef50_C4LLM4 Na(+)/H(+) antiporter subunit n=3 Tax=Corynebacterium RepID=C4LLM4_CORK4 Length = 999 Score = 308 bits (789), Expect = 4e-82, Method: Composition-based stats. Identities = 124/561 (22%), Positives = 242/561 (43%), Gaps = 41/561 (7%) Query: 4 LQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAG------ 57 ++L+ L + L L LF+ LDR A + + I ++ + + G Sbjct: 1 MELIAIPLFVVLALILVPLFVRLLDRNAGWPLALI-FIASAIPLLRKLPDIIDGNPWTWK 59 Query: 58 VTLVARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFF 117 VT + F P +LR D+LS F L+ + +YS Y+ + G+G+ + Sbjct: 60 VTWIEDFLPNGADVIFSLRADALSTFFALLALGIGAAVFIYSTRYL--HGGRGSMSFYLL 117 Query: 118 MNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVL 177 M F+A++V L++ D+ + +E++SL+S+FL+ R M + G + Sbjct: 118 MTAFMAAVVTLVLADDVILMFISWELVSLASFFLIA-RSGPGGELGSMRTIILTFFGGLT 176 Query: 178 IMIAFLLMGRESGSLDFASF---RTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRA 234 ++ + + +G+ + + P L S + +L K+ P H WLP A Sbjct: 177 LLTSLGISAGVTGTTSLSGIIHSPEWAHHPTLLSVIAVLIATSACTKSAQFPFHFWLPEA 236 Query: 235 HPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYA 294 A ++ L + +VK GI+ +L+ + WW L++ +G +A++ L+A Sbjct: 237 MAADTPVSAFLHAAAVVKAGIYLLLRFSALFHDDA----WWRGLLIIVGMFTAIMAALFA 292 Query: 295 LAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGL 354 L + D+K+L A+STV +G I+ +G+ T + + A+ H L HALFK Sbjct: 293 LQKNDLKKLTAYSTVSQLGWIVCTIGIG-----------TPLAMAAAVVHTLAHALFKSS 341 Query: 355 LFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSL 414 LF+ G + + T D+ ++G + ++MPWT + +I +++A+PPL GFIS+ ++ Sbjct: 342 LFMLIGVVDHQTGTRDIRRLGPIWRKMPWTFSMAVIAATSMAAVPPLFGFISKEGMLDAM 401 Query: 415 FSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTM 474 E A + ++ V L + F R + E P ++ Sbjct: 402 -----AEGELATPATALLLICATVGAILTFAYSYRYVFGGFVDGTRD--VSDVHEAPLSL 454 Query: 475 IVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLL 534 + + L + + ++ + A + +T AT + L+ Sbjct: 455 WLPAAIPGFLSLPLGFVPGFMNSFVDAAADSALSTHHATHTH------LALFHGINVPLM 508 Query: 535 LLLLLAMPLLPGLYWLWCRSR 555 + L++ + + + + +R Sbjct: 509 ISLIVIVVGVTCVVFRKAIAR 529 >UniRef50_C2FWK2 Possible NADH dehydrogenase (Quinone) n=2 Tax=Sphingobacterium spiritivorum RepID=C2FWK2_9SPHI Length = 679 Score = 308 bits (789), Expect = 5e-82, Method: Composition-based stats. Identities = 141/710 (19%), Positives = 270/710 (38%), Gaps = 76/710 (10%) Query: 1 MDALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTL 60 + + +L L FA+ LLG + + I + + G+++ + + Sbjct: 7 ISPVTTALLTLAL-PFAAFLYQALLGKRAQSGIIPAIAIALSALFGLLTFVEIWNYRTVH 65 Query: 61 VAR--FAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFM 118 + F + + + +++L+A M+L++ ++ + LYS +YM + KG ++ Sbjct: 66 IQTDWFTIGNKTFTVGILLNNLTALMLLIVPVIALPVHLYSRSYM--HGDKGIHRYWMYL 123 Query: 119 NIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKT-SINAGMLYFFIAHAGSVL 177 ++F +M+ L++M+N + +E++ +S+ L+ K + A F I G + Sbjct: 124 SLFCFAMLGLVMMNNLLLMYIFWELVGFASYLLIGFWFTKESAAQANKKAFIINRIGDLG 183 Query: 178 IMIAFLLMGRESGSLDFASF--------------------RTLSLSPGLASAVFLLAFFG 217 + ++ + G+L+ ++ G +A + F G Sbjct: 184 FLTGIAIVYSQFGTLNLVELFGSDGLAYQAILSDGQWISPMNNTMPAGWLTAAGIAFFIG 243 Query: 218 FGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGI 277 AK+ PLH WLP A S +S + + MV G+F + L +T L + Sbjct: 244 AMAKSAQFPLHVWLPDAMEGPTSVSSLIHAATMVAAGVFLMA-TLFPLFNETVL-----L 297 Query: 278 LVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVG 337 ++ IG ++A +ALA+ DIKR+LA+ST+ +G +++ +G+ Sbjct: 298 VIAVIGTLTAASAAYFALAQYDIKRILAFSTISQLGYMMVGIGIG--------------A 343 Query: 338 LLGALFHLLNHALFKGLLFLGAGAIISRL-----------HTHDMEKMGALAKRMPWTAA 386 A+FHL H FK LLFL AGA+I + D+ MG L K MP T A Sbjct: 344 WDAAIFHLATHVFFKCLLFLCAGAVIHEMVHLKEKSQQDFDAQDLRNMGGLRKYMPKTFA 403 Query: 387 ACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMC 446 + LA+S P +G++S+ S F S I V+L V L Sbjct: 404 LMALSSLALSGFPLTSGYLSKDSIVISAFEWSSTHGAVYH----IIPVVLIVVSILTAFY 459 Query: 447 FVKMYGITFCGAPR--STHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAH 504 ++ F G R S+ E P M++ M LA C S + L+ I Sbjct: 460 IGRLIFKAFFGQLRVPSSLTAPMHEAPKMMLIPMFFLALWCFFPIFSFNPLSYHHAWIVD 519 Query: 505 AFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGD 564 + P LV + ++L L + + W F Sbjct: 520 GLLDQYPYATNPLAHLV-----------IPVILTLGALGSWWVGYKWYVKNEYPFNPQHR 568 Query: 565 AWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTL--RLNKGLAHVTARAQSTE 622 + + + + + + + ++ + +A + Sbjct: 569 LIQASLKQGYLNELYTFVFVNGTVKLAKICYWIDRNIVDGIVHLISIVILRFSAVINWID 628 Query: 623 PFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLIAIAV 672 + + + L +H+Q+G + Y V +++ L+ + + Sbjct: 629 RVLVDGFVNLVAKTAYWLGNVFRHIQNGRLQYYLFSVFFVVLIGLVYLII 678 >UniRef50_C1A8Y3 NADH-quinone oxidoreductase chain L n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A8Y3_GEMAT Length = 674 Score = 306 bits (784), Expect = 2e-81, Method: Composition-based stats. Identities = 145/558 (25%), Positives = 238/558 (42%), Gaps = 49/558 (8%) Query: 37 ITSLVGGVIGIISGITQLHAGVTLVARFAPPFEFA-DLTLRMDSLSAFMVLVISLLVVVC 95 V + + + + + ++ P D ++D LS MVLVI+ + + Sbjct: 53 AAFAVAMALFMRMRVGMAGPAIVSLGQWMPVGNLVIDWNFQLDQLSMLMVLVITGVGSLI 112 Query: 96 SLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIAR 155 L+S+ YM++ G A ++N+F+A M+ L++ + V +E + L+S+ L+ Sbjct: 113 HLFSIGYMQDDPG--YARYFAYLNLFVAFMLVLVLGGSYPVMFVGWEGVGLASYLLIGFW 170 Query: 156 -QDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRTLSLSPG---LASAVF 211 DK + +AG F + G ++A L+ + LDF ++ G + A+ Sbjct: 171 FSDKANADAGKKAFVVNRVGDFGFLVAMFLIWVTTQHLDFVGAHSVLGGMGGTPVVLAIA 230 Query: 212 LLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTG 270 L F G K+ +PL+ WLP A A P+ SAL + MV G++ + + A Sbjct: 231 LFLFVGCAGKSAQLPLYIWLPDAM-AGPTPVSALIHAATMVTAGVYLVARAAPIFAGAPE 289 Query: 271 LPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHD 330 L ++ AIGA++AL AL + DIK++LA+STV +G + +AVG Sbjct: 290 ASL----VITAIGALTALFAATIALRQWDIKKVLAYSTVSQLGYMFVAVGSG-------- 337 Query: 331 PLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHT-----------HDMEKMGALAK 379 +FHL+ HA FK LLFLGAG++I +H D+ MG LA+ Sbjct: 338 ------AYTAGVFHLVTHAFFKALLFLGAGSVIHAMHHAYHHTHRHDDPQDLRNMGGLAR 391 Query: 380 RMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPI-------- 431 MP TA A + LAI+ +PPL GF S+ +F+ + +A I Sbjct: 392 FMPATAGAMTLATLAIAGVPPLAGFFSKDEILAGVFARAHDSPLANASLLGIPGSTVLYA 451 Query: 432 AMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEA--QEVPNTMIVAMLLLAALCVLIA 489 A + +T L + +M + F G R+ AE + E P M +L+L L + Sbjct: 452 AYGIGILTALLTAIYMTRMLLLAFYGENRTGEAERSALHEAPLIMTAPVLILGVLTLAGG 511 Query: 490 LSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYW 549 I + P T AS L G H ++L+ + L G+ Sbjct: 512 WLNLPALIPIGPVGVLEHWLSPVTAASATRLA-GAGHLSHDIEIVLVGIATGVALLGIVI 570 Query: 550 LWCRSRRAAFRRTGDAWA 567 R+ + Sbjct: 571 AVVLYRKPMADKAHAPVD 588 >UniRef50_B9ZEN4 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Natrialba magadii ATCC 43099 RepID=B9ZEN4_NATMA Length = 678 Score = 305 bits (782), Expect = 3e-81, Method: Composition-based stats. Identities = 140/693 (20%), Positives = 260/693 (37%), Gaps = 73/693 (10%) Query: 15 LFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAPPFEF---- 70 L A + +L L+GI + G + + + + +G Sbjct: 16 LVAFVVALTFGKYMPKKGALAGIIATGGSLALSVLMLVAVASGEVYHETLYQWAIGDAAS 75 Query: 71 --------ADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFI 122 + +D L+A M++++SL+ + ++SL YM G + +F Sbjct: 76 EIGADGIEFTFGILIDPLAALMLVIVSLIAFLVHIFSLGYMNAEGETGLPRYYASLGLFT 135 Query: 123 ASMVALLVMDNAFWFIVLFEMMSLSSWFLVIAR-QDKTSINAGMLYFFIAHAGSVLIMIA 181 SM+A + DN + FE++ L S+ L+ + +++ +A F + G ++ Sbjct: 136 FSMLAFVYADNLLMAFMFFELVGLCSYLLIGFWFRTRSAPSAAKKAFLVTRFGDYFFLLG 195 Query: 182 FLLMGRESGSLDFASFRTLSLSP----------------GLASAVFLLAFFGFGAKAGMM 225 + + G++ FA + + + LL G K+ Sbjct: 196 VVAIAATFGTVAFAGDNSFVTAAETAIDNGDTLFGFGAETWVTITALLVLGGVIGKSAQF 255 Query: 226 PLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAI 285 PLH+WLP A + ++ + + MV G++ + + + L ++ +G Sbjct: 256 PLHTWLPDAMEGPTTVSALIHAATMVAAGVYLVAR----MFGYYALSPTALAIIAFVGGF 311 Query: 286 SALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHL 345 +AL + + DIK++LA+ST+ G ++L +GV G + +FHL Sbjct: 312 TALFAATMGVVKDDIKQVLAYSTISQYGYMMLGLGVG--------------GYVAGVFHL 357 Query: 346 LNHALFKGLLFLGAGAIISRL-HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGF 404 +NHA FK LLFLGAGA+I + H DM KMG L + P T L G LA++ I P +GF Sbjct: 358 MNHAFFKALLFLGAGAVIVLMHHEQDMWKMGGLKDKAPITYYTFLAGALALAGIIPFSGF 417 Query: 405 ISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHA 464 S+ + E + L A M V +M +TF G PRS A Sbjct: 418 WSKDEILYDALIIGIEEPIILA-----AYAMALVAVFFTGFYTFRMVFLTFHGEPRSEAA 472 Query: 465 EEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTN---TPPATVASGIALV 521 E+ ++ +M +++L L ++ ++ K+ I F G+ Sbjct: 473 EDPHDIGWSMKAPLIVLGVLALVAGIANLAPVAKLAQIDIVFLEHWLDGEYGAVEGLTYS 532 Query: 522 PGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFR---RTGDAWACGYGWENAMAP 578 + + L + + G+ L S + A +A Sbjct: 533 AYGELLAFETAYIGGEQLTVLIAAGVSLLLAFSGAGLAWKLYNVPEPVAHKERLGSARQT 592 Query: 579 SGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQ 638 + Q V + A + + V+ + +A+ Sbjct: 593 LESNYYQDEYQV--------------WLAEGFTQPLARAADRFDQTVIDGVVNSVSTASL 638 Query: 639 RLAKEIQHLQSGDFRLYCLYVVAALVVLLIAIA 671 + ++ +Q+G Y +VA + LL+ + Sbjct: 639 FSSSRLKRIQTGLVTNYAALLVAGFIGLLLVLG 671 >UniRef50_B3DZT2 NADH dehydrogenase subunit L n=2 Tax=Verrucomicrobia RepID=B3DZT2_METI4 Length = 601 Score = 304 bits (780), Expect = 5e-81, Method: Composition-based stats. Identities = 130/477 (27%), Positives = 223/477 (46%), Gaps = 41/477 (8%) Query: 21 SLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAPPFEFADLTLRM--- 77 + + + LS S+ I + + + G + L++++ Sbjct: 18 AFIIWAFLKPFPSLSQWVSVGACGIAFLVSLG-ISLGSIPEPSPISWIDVGGLSIQLGMV 76 Query: 78 -DSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFW 136 D LS M+LV+S + ++ +YS+ YM E G+ +++F+ SM+ ++V N Sbjct: 77 FDPLSKVMLLVVSGVGLMIHIYSMGYMAEDPGRS--RFFAELSLFMLSMLGIVVATNFIM 134 Query: 137 FIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFI-AHAGSVLIMIAFLLMGRESGSLDFA 195 + +E++ +SS+ L+ +K S A F+ G ++ +L +GSL F Sbjct: 135 MYIFWELVGVSSYLLIGFWFEKPSAAAAATKAFLANRIGDFGFLLGIILFWTLTGSLMFD 194 Query: 196 -SFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASAL-MSGVMVKI 253 S + + L + + LL F G K+ +PLH WLP A P+ SAL + MV Sbjct: 195 PSVASYLKNHPLVTIMGLLLFCGCVGKSAQIPLHVWLPDAM-EGPTPVSALIHAATMVAA 253 Query: 254 GIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVG 313 G++ + ++ L ++ GAI+A + L A + DIKR+LA+ST+ +G Sbjct: 254 GVYMLCRIFFVL----EQSPQALDVIAWTGAITAAVAALTATQQDDIKRILAYSTMSQLG 309 Query: 314 IILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRL-HTHDME 372 +++AVG + A+FHL HA FK LLFLGAG+++ L H D+ Sbjct: 310 YMVMAVG--------------SSATVAAMFHLCTHAFFKALLFLGAGSVLHVLHHEQDIW 355 Query: 373 KMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIA 432 KMG L K+MP T LIG A++ IP +GF S+ + + +R + Sbjct: 356 KMGGLWKKMPLTFLTFLIGSCALAGIPGFSGFFSKDTIIEMVGEKNR-----------VL 404 Query: 433 MVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIA 489 + T GL +++ +TF G P++ A A+E P M++ ML+L+ V+ Sbjct: 405 FWLALFTAGLTAFYMTRLFVVTFFGPPKTEVAAHAKESPLVMVLPMLVLSFFAVVGG 461 >UniRef50_B4SLF9 NADH dehydrogenase (Quinone) n=20 Tax=cellular organisms RepID=B4SLF9_STRM5 Length = 943 Score = 304 bits (779), Expect = 7e-81, Method: Composition-based stats. Identities = 133/552 (24%), Positives = 228/552 (41%), Gaps = 30/552 (5%) Query: 18 SLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAPPFE--FADLTL 75 ++A R + +GG + I+ +T +V P D TL Sbjct: 16 AVAVAAFPRSSRSTAAWLAALAPLGG-LAILGWLTPSVLDGQVVRTMVPWLPQIGLDFTL 74 Query: 76 RMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAF 135 R+D L+ ++ + + LY+ Y+ + A ++ +F+ +M+ ++V N Sbjct: 75 RLDGLAWMFAGLVLGIGALVVLYARYYLSSQDN--AHRFYTYLLLFMGAMLGMVVSGNLL 132 Query: 136 WFIVLFEMMSLSSWFLVIAR-QDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDF 194 ++ +EM S+SS+ L+ + + + I G + ++ LL+GR GS D Sbjct: 133 LLMIFWEMTSISSFLLIGFWSHRQDAREGARMALVITGGGGLALLGGVLLIGRIVGSFDL 192 Query: 195 ASFRTLS---LSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASA-LMSGVM 250 + L L G K+ P H WLP A AAP+ SA L S M Sbjct: 193 DVVLAAGEQIRASALYPYALFLVLAGIFTKSAQFPFHFWLPHAM-AAPTPVSAYLHSATM 251 Query: 251 VKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVE 310 VK G+F + ++ L + V IGA++ L+G A+ + D+K LLA+ST+ Sbjct: 252 VKAGVFLLARLHPALAGSD----LFFYTVSGIGALTLLIGAWNAIFQHDLKGLLAYSTIS 307 Query: 311 NVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHD 370 ++G+I L G++ T + ++ +FH+LNHA FK LF+ AG I T D Sbjct: 308 HLGLITLLFGLS-----------TPMAVVAGVFHILNHATFKASLFMAAGIIDHETGTRD 356 Query: 371 MEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGP 430 M K+G L + MP+T+A +I LA++ IP LNGF+S+ + + Sbjct: 357 MRKLGGLRRLMPFTSALAIIASLAMAGIPLLNGFLSKEMLFAEALTAGGGPGAMRTAVS- 415 Query: 431 IAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIAL 490 + + G V ++ TF G E P M V + LL +CV + + Sbjct: 416 ---IAALLAGVFGVAYSLRFVHDTFFGPGPHDLDRVPHEPPRWMKVPVELLVVICVAVGI 472 Query: 491 SASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWL 550 + + ++H A A S ++ ++ + L L L Sbjct: 473 APALTVAPVLHAAAASILGNAMPEYSLAVWHGFNLPLAMSAIGVVGGVALYFGLRRLINL 532 Query: 551 WCRSRRAAFRRT 562 + + R Sbjct: 533 HGVTNTSPGRNV 544 >UniRef50_B9LUW7 NADH/Ubiquinone/plastoquinone (Complex I) n=13 Tax=cellular organisms RepID=B9LUW7_HALLT Length = 698 Score = 304 bits (778), Expect = 1e-80, Method: Composition-based stats. Identities = 125/471 (26%), Positives = 204/471 (43%), Gaps = 31/471 (6%) Query: 10 SLILYLFASLASLFLLGLDRLAIKLSGIT--SLVGGVIGIISGITQLHAGVTLVARFAPP 67 L+ L + +A+ F++ R G T + V + S + + G Sbjct: 11 PLLAVLVSFVAAFFIVASYRSPNVREGWTIVAAVAKFAIVASMLPAVLDGAVFEWSLGAF 70 Query: 68 FEFA-DLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMV 126 + LR D+L + S L +V S YS+ YMR + + +++ + Sbjct: 71 LPGGIEFVLRADALGMLFAFLASGLWIVTSFYSIGYMRGNDEVNQTRYFAAFAVSLSATM 130 Query: 127 ALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHA-GSVLIMIAFLLM 185 + N V +E++S++++ LV + + AG Y G VL++ L+ Sbjct: 131 GIAFAGNLVTIFVFYELLSIATYPLVAHDETDEARAAGRKYLAYTMFGGGVLVLAGTALV 190 Query: 186 GRESGSLDFASFRTLSL---SPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHA 242 +G++ F + L PGLA F L GFG KAG+MPLH WLP A AP+ Sbjct: 191 YLIAGNVSFTAGGIEELANADPGLAMLAFFLLAIGFGVKAGIMPLHQWLPEAM-VAPTPV 249 Query: 243 SALMSGV-MVKIGIFGILKVAMDLLAQT-------GLPLWWGILVMAIGAISALLGVLYA 294 S L+ V +VK G FG+ +V +D+ G+++ IGAI+ + A Sbjct: 250 SGLLHAVAVVKSGAFGVSRVVLDVFGPELVFDLSLPFGFSAGLVLSTIGAITLTAASIIA 309 Query: 295 LAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGL 354 L + +K+ LA+STV + I+L +G+ GL+GAL H+ HA K Sbjct: 310 LRKDHLKQRLAYSTVSQLSYIILGLGL-----------FGWYGLVGALLHIPAHAFMKLT 358 Query: 355 LFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSL 414 LF AG + HT + +M + KRMP T A + L ++ IP L GF+S++Y Sbjct: 359 LFFCAGNLHVSTHTDYISEMAGIGKRMPLTMGAFTVASLGMAGIPLLAGFVSKYYMLIGG 418 Query: 415 FSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAE 465 + L + L ++G L + F + F A + A+ Sbjct: 419 IRM----GAQLTPVAYYLVGALLLSGVLNIAYFWPVIYTAFFEAEDAHDAK 465 >UniRef50_A9B485 Proton-translocating NADH-quinone oxidoreductase, chain L n=6 Tax=Chloroflexi (class) RepID=A9B485_HERA2 Length = 736 Score = 302 bits (775), Expect = 2e-80, Method: Composition-based stats. Identities = 137/663 (20%), Positives = 232/663 (34%), Gaps = 99/663 (14%) Query: 69 EFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYE----GKGAAAMGFFMNIFIAS 124 F R+D + M+ +++L L+S+ YM E + + ++ +F AS Sbjct: 108 GFFKFGYRLDGATVLMLAMVTLAAWCIHLFSVGYMAHDEFPTGHQRQSRFFSYIALFTAS 167 Query: 125 MVALLVMDNAFWFIVLFEMMSLSSWFLVIARQ-DKTSINAGMLYFFIAHAGSVLIMIAFL 183 M+ + + DN F + +E+M L S+ L+ ++ A F G V +M+ + Sbjct: 168 MLGMTLADNLLLFFICWELMGLCSFLLIGFWFFKPSAREAAKKAFITTRIGDVGMMLGMM 227 Query: 184 LMGRESGSLDFA----------------SFRTLSLSPGLASAVFLLAFFGFGAKAGMMPL 227 + ++GSL F + +L AS + L F G K+ PL Sbjct: 228 YIYNKAGSLTFGHEPGQIYNGEFLESIKTATSLIPGISAASLMAGLVFLGTVGKSAQFPL 287 Query: 228 HSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAIS 286 H WLP A P+ SAL + MV G+F +++ LP +V IGA + Sbjct: 288 HVWLPDAM-EGPTPVSALIHAATMVAAGVFLVIRTFPIFAVSEVLP-----VVAFIGAFT 341 Query: 287 ALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLL 346 AL L A+A+ DIKR+LA+ST+ +G ++ A+G+ + ALFHLL Sbjct: 342 ALFAALIAVAQYDIKRILAFSTLSQLGFMVAALGIG--------------AWVAALFHLL 387 Query: 347 NHALFKGLLFLGAGAIISRL---------HTHDMEKMGALAKRMPWTAAACLIGCLAISA 397 HA FK LLFLG+G++I + D+ MG L K MP T + G A+ Sbjct: 388 THAFFKALLFLGSGSVIHGMEATVGHDPDKAQDIRNMGTLRKFMPITFLTYMAGFFALIG 447 Query: 398 IPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCG 457 IPP GF S+ F + +L L + + F G Sbjct: 448 IPPFAGFWSKDEIILDAFLHHH----------YVVYGVLTAAAFLTAFYMTRQIVVVFFG 497 Query: 458 APRSTHAEE----------------------------AQEVPNTMIVAMLLLAALCVLIA 489 R + E P +M + +++L+ V Sbjct: 498 KFRGYEPRKLAHAAAHGHDDHGHGDHDDHHHHHEAHDPHESPRSMTIPLIILSLFAVFAG 557 Query: 490 LSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYW 549 + G+ P + ++ L+ L + Sbjct: 558 FVNAGFLGIHWFA--------DYVNPGGLIPKPDFMVAGIATAVALVGAGLGYLTYRNAF 609 Query: 550 LWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNK 609 R G W + + + + + + Sbjct: 610 KNANDRDPLAGALGPIWTLLENRFYIDQIYDKTFIALTYGAGQVMNWIDRHVVDRVVNLT 669 Query: 610 GLA--HVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLL 667 GL + + F V I T + ++ +G + Y Y+ +V+L Sbjct: 670 GLLTLFIGRINFIIDDFSLNTVTDDIGEGTIMVGDGVRQSATGKIQDYGAYIFGGVVLLA 729 Query: 668 IAI 670 + Sbjct: 730 LIY 732 >UniRef50_P50939 NADH-quinone oxidoreductase subunit L n=36 Tax=cellular organisms RepID=NUOL_RHOCA Length = 712 Score = 302 bits (773), Expect = 4e-80, Method: Composition-based stats. Identities = 146/669 (21%), Positives = 245/669 (36%), Gaps = 102/669 (15%) Query: 72 DLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMRE-----YEGKGAAAMGFFMNIFIASMV 126 +R+D L+A M++V++ + + LYS YM + A +++ F +M+ Sbjct: 71 SWGIRLDRLTAIMLIVVTTVSALVHLYSWGYMAHDENWTHHEAYKARFFAYLSFFTFAML 130 Query: 127 ALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAG-MLYFFIAHAGSVLIMIAFLLM 185 L+ DN +E + ++S+ L+ K S NA + F + G + + + Sbjct: 131 MLVTSDNLVQMFFGWEGVGVASYLLIGFYYKKPSANAAAIKAFVVNRVGDFGFALGIMGL 190 Query: 186 GRESGSLDF------------ASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPR 233 + S+D L+ A+ + +L F G K+ + LH+WLP Sbjct: 191 FFLTDSIDMDVIFASAPELAKTELHFLAWEFNAANLLAVLLFIGAMGKSAQLFLHTWLPD 250 Query: 234 AHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVL 292 A P+ SAL + MV G+F + +++ ++V+ +GA++A Sbjct: 251 AM-EGPTPVSALIHAATMVTAGVFLVCRMSPLF----EYAPEAKMMVVYVGAVTAFFAAT 305 Query: 293 YALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFK 352 L + DIKR++A+ST +G + +A G + + A+FHLL HA FK Sbjct: 306 VGLVQNDIKRVIAYSTCSQLGYMFVAAGSGVYSV--------------AMFHLLTHAFFK 351 Query: 353 GLLFLGAGAIISRL-HTHDMEKMGALAKRMPWTAAACLIGCLAI--SAIP---------P 400 +LFLGAG++I + H DM G L K++P+T A +IG LAI IP Sbjct: 352 AMLFLGAGSVIHAMHHEQDMRNYGGLRKKIPFTFAIMMIGTLAITGVGIPFFSIGGVPVG 411 Query: 401 LNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPR 460 G++S+ +S F+ A +L G+ ++ +TF G R Sbjct: 412 FAGYLSKDAIIESAFASG----------NGFAFYVLVAAAGMTSFYSWRLIFLTFYGEAR 461 Query: 461 STH--AEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGI 518 H + A E P M+ + LLA VL + W +F N P A A G Sbjct: 462 GDHHKHDHAHESPAVMLAPLALLAVGSVLAGMV--WYHSFFGDKVASFFNLPAA--AHGE 517 Query: 519 ALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAP 578 A P + A A N + Sbjct: 518 AHGTEHATEGHVPEAAMTAEAAHEAAMAGTMAMAEPAAEHAVAKAPQGAIFMAETNHVIH 577 Query: 579 SGNGV----------MQPLRVVFSALFRLRQQLDP--TLRLNKGLAHVTARAQSTEPFWD 626 +GV F+ L+ + + P T R GL + +D Sbjct: 578 DAHGVPDWVKLSPFGAMVTGFFFAWLYYIGDKPLPGRTARALPGLYRFLLNKWYFDELFD 637 Query: 627 ERVIRP------------------------IVSATQRLAKEIQHLQSGDFRLYCLYVVAA 662 + P + + +QSG Y +V Sbjct: 638 LLFVNPAKSLGRKLWKGGDGAVIDGAINGLALGWIPFFTRVAGRIQSGYLFHYAFAMVLG 697 Query: 663 LVVLLIAIA 671 +V L+ + Sbjct: 698 IVALMFWVV 706 >UniRef50_A9F578 NADH dehydrogenase I chain M n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9F578_SORC5 Length = 754 Score = 302 bits (773), Expect = 4e-80, Method: Composition-based stats. Identities = 122/475 (25%), Positives = 207/475 (43%), Gaps = 50/475 (10%) Query: 75 LRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNA 134 + +D +S MVL+ +L+ V +L S + + +G N+ + M + + + Sbjct: 276 VGVDGVSISMVLLTALISFVGALASYSVHDQLKG-----YFAMYNLLVTGMFGVFIALDL 330 Query: 135 FWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGS--- 191 F F V +E+M L +FL+ A + +F AGSV +++AF+ +G Sbjct: 331 FLFFVFWEVMLLPMYFLIGIWGGPRREYAAIKFFLYTLAGSVFMLLAFIWFYLNAGHTYL 390 Query: 192 -----------------LDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRA 234 + +A+ L V++ F GF K M P H+WLP A Sbjct: 391 VDGQATERIFSIPELSRVAWAAQGLTILGVAAVKVVWIWLFVGFAIKIPMFPFHTWLPDA 450 Query: 235 HPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYA 294 H AP+ S +++GV++K+G +GIL++ LL + W + G ++ L G A Sbjct: 451 HVEAPTAISVILAGVLLKMGTYGILRINFTLLPEA--TQWAAPAMAVFGVVNILYGAFCA 508 Query: 295 LAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGL 354 +A+ D+K+L+A+S+V ++G LLA+G +T G+ L + NH L G+ Sbjct: 509 MAQSDLKKLVAYSSVSHMGFTLLALGA-----------MTPQGIQACLVQMFNHGLITGM 557 Query: 355 LFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSL 414 LF G + R+HT D+++ G LA MP A +A +P L+GF E T+ Sbjct: 558 LFTLVGVVYDRVHTRDIDRFGGLASEMPLYTALVGFAFMASLGLPGLSGFWGEAMTFIGA 617 Query: 415 FSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQ-----E 469 F + +A V + +T + +M+ TF + R + E E Sbjct: 618 FPRY-------RALTILAAVGVILTAAYHLWALQRMFLGTFRASWRQSKYLEPFGGKFPE 670 Query: 470 VPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGT 524 + + ++ LAAL +++ L I A S IA PG Sbjct: 671 ISGRELASIAPLAALVLVLGFWPRPLLSLIDRGALDVHRLVDRPGQSQIAGAPGA 725 >UniRef50_Q2W3J5 NADH:ubiquinone oxidoreductase subunit 5 n=6 Tax=Alphaproteobacteria RepID=Q2W3J5_MAGSA Length = 642 Score = 301 bits (772), Expect = 4e-80, Method: Composition-based stats. Identities = 124/565 (21%), Positives = 227/565 (40%), Gaps = 51/565 (9%) Query: 9 WSLILYLFASLASLFL--LGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAP 66 L+ + A L F+ G + L ++++ G+I + V + Sbjct: 8 LPLLGAVVAGLFGRFIGDRGAQIVTCALLITSAVLSGLIFQKVALGGEAQTVVVAEWIRS 67 Query: 67 PFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMV 126 + +L++D+L+A M++V++ + +YS+ YM ++++F +M+ Sbjct: 68 GTMSVNWSLKVDTLTAVMLIVVTWVSAAVHVYSVGYMSHDP--SIWRFHSYLSLFTFAML 125 Query: 127 ALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSI-NAGMLYFFIAHAGSVLIMIAFLLM 185 L+ DN +E + ++S+ L+ +K S A + F + G + + Sbjct: 126 MLVTSDNLVQMFFGWEGVGVASYLLIGFWYEKPSASAAAIKAFVVNRVGDFGFALGIFGV 185 Query: 186 GRESGSLDFASFRTLSLSPGLASAVF------------LLAFFGFGAKAGMMPLHSWLPR 233 GS+ F + + A+ F LL F G K+ + LH+WLP Sbjct: 186 YFLFGSVGFDAIFAAAPEKANATVNFFGGQWHAITICCLLLFVGAMGKSAQLGLHTWLPD 245 Query: 234 AHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVL 292 A P+ SAL + MV G+F + +++ +V IGA +A+ Sbjct: 246 AM-EGPTPVSALIHAATMVTAGVFMVARMSPLF----EFSDTALTVVTVIGAATAIFAAT 300 Query: 293 YALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFK 352 + DIKR++A+ST +G + A+GV+ A+FHL+ HA FK Sbjct: 301 VGCVQNDIKRVIAYSTCSQLGYMFFAIGVS--------------AYQAAIFHLMTHAFFK 346 Query: 353 GLLFLGAGAIISRL-HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTW 411 LLFLGAG++I + D+ +MG + K + T IG LA++ +P G+ S+ Sbjct: 347 ALLFLGAGSVIHAMSDEQDIRRMGGIWKHVKVTWVLMWIGSLALAGVPFFAGYYSKDTIL 406 Query: 412 QSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHA--EEAQE 469 ++ ++ + G A L ++ +TF G PR+ E Sbjct: 407 EAAWASHTIAGQGAYWLGCTA-------AFLTAFYSWRLLLLTFHGRPRADEHVMAHVHE 459 Query: 470 VPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQV 529 P M++ +L LA L A W + H A + + H Sbjct: 460 SPAVMLIPLLFLATGA----LFAGWAGYDMFVGHHQHDFWRSAILVTEAHPSLENAHHVP 515 Query: 530 TPSLLLLLLLAMPLLPGLYWLWCRS 554 + LL ++A+ + Y + + Sbjct: 516 SWVALLPTVVAVSGIALAYLFYVFA 540 >UniRef50_B6YWQ6 Hydrogenase 4, subunit 3 n=2 Tax=Thermococcus RepID=B6YWQ6_THEON Length = 520 Score = 301 bits (772), Expect = 5e-80, Method: Composition-based stats. Identities = 131/518 (25%), Positives = 244/518 (47%), Gaps = 47/518 (9%) Query: 8 TWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAPP 67 +I L S+ + G ++ I + + V + LV F Sbjct: 9 VIPVIFAFALPLFSIIIKGNRKIIQAYVLIGTGLALVSTFKLFQKTYASDRPLVYTFGGW 68 Query: 68 FEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVA 127 + +D LSA + LV + L+ + S+YS Y+ G A ++ Sbjct: 69 SAPVGVIYEVDKLSALIALVTAGLMFLISIYSYRYLEHENGLE--WYYTLYLGLEAGLLG 126 Query: 128 LLVMDNAFWFIVLFEMMSLSSWFLVIARQDK-TSINAGMLYFFIAHAGSVLIMIAFLLMG 186 +L+ +AF V+ E+ S++++ LV+ +D+ S+ AG+ Y I G+ + +A ++ Sbjct: 127 VLLTGDAFNLFVMIEVTSIAAYALVMFYRDRGDSVYAGLKYALIGAVGTTMYFLALGILY 186 Query: 187 RESGSLDFASFRTLSLSPGLA-------------SAVFLLAFFGFGAKAGMMPLHSWLPR 233 G+++ A LA + F KA ++P H WLP Sbjct: 187 GAFGTVNLADLTAKVHGMDFPLTGAPVGDIVVASGVALALATWAFLIKAAIVPNHFWLPE 246 Query: 234 AHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGI------LVMAIGAISA 287 AHPAAPS SA++SG++V +G++ +++ + T +P I +V+ +GA+S+ Sbjct: 247 AHPAAPSPISAILSGLVVNVGVYSLIRFLYTVYGGTLIPELARIVSVLSNIVVVLGAVSS 306 Query: 288 LLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLN 347 L G ++D+KRL+A+ST+ ++G + +AVG+ T +GL ALFHL+N Sbjct: 307 LFGAAMMTVQKDVKRLIAYSTIMHMGYLFMAVGLG-----------TQLGLQAALFHLVN 355 Query: 348 HALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISE 407 HA+ K LLFL AGA I + + +++ + L K+MP + I L++ +PPLN F S+ Sbjct: 356 HAIAKALLFLAAGAFIHAIGSRNVDDLAGLGKKMPVATFSLAIATLSLVGVPPLNVFFSK 415 Query: 408 WYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEA 467 + +L A ++L ++ +A++ +V+++ I + G PR + Sbjct: 416 LLLFNALMEKGLGPA-----------LILVISSVIALVAYVRVFHIIWLGKPRKDIKIKE 464 Query: 468 QEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHA 505 +M + L+LA +C+++ L+ + +++ A Sbjct: 465 H---ASMSLVCLVLAVICIIVGLATPIIVDGLINPAAT 499 >UniRef50_C0JX69 Subunit 5 of NADH-plastoquinone oxidoreductase n=1 Tax=Pyramimonas parkeae RepID=C0JX69_9CHLO Length = 642 Score = 300 bits (769), Expect = 9e-80, Method: Composition-based stats. Identities = 142/697 (20%), Positives = 261/697 (37%), Gaps = 99/697 (14%) Query: 7 LTWSLILYLF--ASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQL---------H 55 W + ++ A++ L L+ + L + + IS I L + Sbjct: 8 YAWLIPVFPLFSATVMGLGLISFQKATQSLRRDLAFFTIFLLGISVIFSLAIFFFQYNGN 67 Query: 56 AGVTLVARFAPPFEFA-DLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAM 114 + F+ ++ +D LS+ M++V+S + + +Y+ YM +G Sbjct: 68 GSYQWEMEWVVSQNFSLEMGYLIDPLSSTMLVVVSTVAFLVMIYTDGYMNYDQG--YVRF 125 Query: 115 GFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKT-SINAGMLYFFIAHA 173 ++++F ASM+ L++ N + +E++ L S+ L+ +T + +A F Sbjct: 126 FSYLSLFTASMLGLVLSTNLVQVYIFWELIGLCSYLLIGFWFTRTTAGDACQKAFITNRM 185 Query: 174 GSVLIMIAFLLMGRESGSLDFASFRTLSLS--------PGLASAVFLLAFFGFGAKAGMM 225 G +++ L + S F S L + +L F G +K+ Sbjct: 186 GDFGLLLGILGFYWLTKSFHFNEIAFRLESLLQVDPKLIPLGTLFAILLFLGPISKSAQF 245 Query: 226 PLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGA 284 PLH WLP A P+ SAL + +V G+F + + + + G Sbjct: 246 PLHVWLPDAM-EGPTPISALIHAATLVAAGVFLVGR----MFPIFDQFPIVMSTIAWTGC 300 Query: 285 ISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFH 344 ++A LG A + D+K+ LA+STV +G +++A+GV LFH Sbjct: 301 LTAFLGATIATTQVDLKKGLAYSTVSQLGYMMMAMGVG--------------SYSAGLFH 346 Query: 345 LLNHALFKGLLFLGAGAIISRLHT---------HDMEKMGALAKRMPWTAAACLIGCLAI 395 L+ HA K LLFLG+G+ I + +M +MG L K+MP TA LIG L+I Sbjct: 347 LITHAYSKALLFLGSGSAIHGMEGAVGFSPYINQNMNQMGGLRKKMPITAITFLIGTLSI 406 Query: 396 SAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITF 455 PP F S+ LF A PI + +T GL ++Y +TF Sbjct: 407 CGFPPFACFWSKDAILSDLFQ-----------ANPILWLFAWLTAGLTSFYMFRIYFLTF 455 Query: 456 CGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVA 515 G R + +E M+ +++L +++ L+ + Sbjct: 456 EGTFRGPNISLVKESGPMMLFPLIVLTIPTLILGLTGTPFKDFFKSFQENIPIETD---- 511 Query: 516 SGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENA 575 V + S + + LL +Y+ SR A Sbjct: 512 -----VDWPEFLTMAGSSVGIGLLGFLFAFFVYYKCSISRTALV---------------- 550 Query: 576 MAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVS 635 + PL + L + + K + R + ++ + ++ Sbjct: 551 ------SLSLPLYEFSKNKWYLDDLYEII--IVKANRKLAQRILFFDQYFIDGLVNFSGI 602 Query: 636 ATQRLAKEIQHLQSGDFRLY---CLYVVAALVVLLIA 669 + +++ ++G F+ Y L+V+ + V L+ Sbjct: 603 FVFFTGEGLRYTETGRFQAYGSTILFVLISFVGYLVF 639 >UniRef50_B0SZ37 Proton-translocating NADH-quinone oxidoreductase, chain L n=7 Tax=Alphaproteobacteria RepID=B0SZ37_CAUSK Length = 694 Score = 300 bits (769), Expect = 1e-79, Method: Composition-based stats. Identities = 148/738 (20%), Positives = 256/738 (34%), Gaps = 115/738 (15%) Query: 3 ALQLLTWSLILYLFASLAS-LFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAG--VT 59 L+T ++ L A++ + LF + +A + +L+ +Q G Sbjct: 1 MQTLVTILVLAPLVAAIIAGLFGRRIGDVASQAITTGALILSCALGWYVFSQWTWGHMEA 60 Query: 60 LVARFAPPFEFADL----TLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMG 115 P + ++R+D+LSA M++V++ + + +YS YM E K Sbjct: 61 FTVDLLPFIHVGNFVSNWSIRIDALSAVMLIVVTTVSALVHVYSWGYMAEDPDK--PRFF 118 Query: 116 FFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKT-SINAGMLYFFIAHAG 174 ++++F +M+AL+ + +E + L+S+ L+ K + A + F + G Sbjct: 119 AYLSLFTFAMLALVTAADFMQLFFGWEGVGLASYLLIGFWYKKPTASAAAVKAFVVNRVG 178 Query: 175 SVLIMIAFLLMGRESGSLDFASFRTLSLSP------------GLASAVFLLAFFGFGAKA 222 + + G++ F L + L L F G K+ Sbjct: 179 DFGFALGIMTTFWAYGTIQFHELFPLIAASAPRTWEFAGHVFPLVDIACFLLFVGAMGKS 238 Query: 223 GMMPLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMA 281 LH+WLP A P+ SAL + MV G++ + L +V Sbjct: 239 AQFFLHTWLPDAM-EGPTPVSALIHAATMVTAGVYMLC----LLSPMFEYAPIAKNIVTV 293 Query: 282 IGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGA 341 IGAI+AL L + DIKR++A+ST +G + A G+ A Sbjct: 294 IGAITALFAATVGLTQNDIKRVIAYSTCSQLGYMFFAAGIG--------------AYQAA 339 Query: 342 LFHLLNHALFKGLLFLGAGAIISRL-HTHDMEKMGALAKRMPWTAAACLIGCLAISAI-- 398 +FHL HA FK LLFLGAG++I + H DM K GAL K +P T A IG +AI+ + Sbjct: 340 MFHLFTHAFFKALLFLGAGSVIHGMHHEQDMRKYGALTKLLPVTFIAMTIGTIAITGLGF 399 Query: 399 PP----LNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGIT 454 PP GF S+ ++ F+ + + AL A ++ + GL ++ T Sbjct: 400 PPLHLGFAGFYSKDTIIEAAFAAGQANSTAL-----FAWIIGVLVAGLTSFYSWRLAFFT 454 Query: 455 FCGAPR----------------------------------------STHAEEAQEVPNTM 474 F G R H + E P M Sbjct: 455 FNGKARWGHDDHHAHDAHSAHGHEDLVHDETHDEPLADDHAHDDHRHGHDHKPHESPLVM 514 Query: 475 IVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLL 534 +V +++L+ V + A A ++ Sbjct: 515 LVPLIVLSIGAVFAGF---LFTDYFVGHGQAEFWRGAIYNAPTNHVLHEAHEVAEWVKWS 571 Query: 535 LLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSAL 594 L+ + L+ +Y + + + PL V F Sbjct: 572 PLIASIIGLIVAVYVYLIKGN------------------ERLGAALAARNGPLYVFFYNK 613 Query: 595 FRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRL 654 + + T + D + + + + + LQSG Sbjct: 614 WFFDELYQATFVRLAKFLGDLFWKGGDQKLIDGFGPDGVSAVSYEVGRRTGKLQSGYLYH 673 Query: 655 YCLYVVAALVVLLIAIAV 672 Y ++ + LL+ V Sbjct: 674 YAFVMLIGVAGLLLFALV 691 >UniRef50_B3PW10 NADH-ubiquinone oxidoreductase protein, chain L n=51 Tax=cellular organisms RepID=B3PW10_RHIE6 Length = 666 Score = 300 bits (769), Expect = 1e-79, Method: Composition-based stats. Identities = 127/632 (20%), Positives = 228/632 (36%), Gaps = 86/632 (13%) Query: 71 ADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLV 130 +LR+D+L++ M++V++ + ++ +YS+ YM + ++++F +M+ L+ Sbjct: 77 VSWSLRVDTLTSVMLVVVNTVSMLVHVYSIGYM--HTDPHRPRFFAYLSLFTFAMLMLVT 134 Query: 131 MDNAFWFIVLFEMMSLSSWFLVIARQDKTSI-NAGMLYFFIAHAGSVLIMIAFLLMGRES 189 DN +E + L+S+ L+ K S A M F + G ++ + Sbjct: 135 ADNLAQMFFGWEGVGLASYLLIGFWFKKPSATAAAMKAFIVNRVGDFGFVLGIAGVFVLF 194 Query: 190 GSLDFASFRTLSLS------------------------PGLASAVFLLAFFGFGAKAGMM 225 G+++ + + + + V LL F G K+ Sbjct: 195 GAINLDTIFANASNFAPHEGGGEAGEVILNLFGMQLDKAHALTGVCLLLFMGAMGKSAQF 254 Query: 226 PLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGA 284 LH+WLP A P+ SAL + MV G+F + +++ L +V IGA Sbjct: 255 LLHTWLPDAM-EGPTPVSALIHAATMVTAGVFLVARMSPLF----ELSPDALTVVTVIGA 309 Query: 285 ISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFH 344 I+A L + DIKR++A+ST +G + +A+GV G A+FH Sbjct: 310 ITAFFAATVGLVQNDIKRVIAYSTCSQLGYMFVALGVGAYG--------------AAIFH 355 Query: 345 LLNHALFKGLLFLGAGAIISRL-HTHDMEKMGALAKRMPWTAAACLIGCLAI--SAIP-- 399 L HA FK LLFL AG++I + DM MG L + T +IG LAI IP Sbjct: 356 LFTHAFFKALLFLCAGSVIHAVDGEQDMRYMGGLRPHIKVTFWMMIIGTLAITGVGIPFT 415 Query: 400 --PLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCG 457 GF S+ ++ ++ A +L + ++ +TF G Sbjct: 416 PIGFAGFFSKDVIIEATYASHSP-------VSGFAFSLLVIAALFTSFYSWRLIFMTFFG 468 Query: 458 APRSTHA--EEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVA 515 PR++H E P M+V + LLA V + + + A Sbjct: 469 KPRASHEVMHHVHESPQVMLVPLYLLAIGAVFAGV----IFEGRFYGEEYAEFWKGALFT 524 Query: 516 SGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENA 575 + FH L + + ++++ RS + Sbjct: 525 GAENELVEQFHHVPALVGLSPFIAMLLGFVTAWYMYIRSPQTPRVLAKQ----------- 573 Query: 576 MAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVS 635 + L + + D + D + + Sbjct: 574 --------HRVLYHFLLNKWYFDELYDFLFVRTARALGRFLWKKGDVGVIDTYGPNGVAA 625 Query: 636 ATQRLAKEIQHLQSGDFRLYCLYVVAALVVLL 667 + + LQ+G Y ++ + L+ Sbjct: 626 RVVAVTDRVVRLQTGYLYHYAFAMLIGIAALV 657 >UniRef50_C7M2U8 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M2U8_ACIFD Length = 625 Score = 300 bits (768), Expect = 1e-79, Method: Composition-based stats. Identities = 148/650 (22%), Positives = 258/650 (39%), Gaps = 81/650 (12%) Query: 30 LAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAPPFEFADLTLRMDSLSAFMVLVIS 89 +A LS + +L + + + A V L F A ++ R+D L+ FMVL ++ Sbjct: 36 IATTLSFVAALALWGVVLARPADERVAVVRLFTWFRAGPLVAHISFRVDELTVFMVLFVT 95 Query: 90 LLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSW 149 + + LYS+ YM + ++N+F+ SM L+ +N + +E + S+ Sbjct: 96 GVSSLIHLYSIGYM--HRDPRFHQFFVYLNLFVFSMTVLVSSNNLPLTFLGWEGVGACSY 153 Query: 150 FLVIAR-QDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASF--RTLSLSPGL 206 +L+ + ++ +AG F + G ++ L+ S+ ++ LS G Sbjct: 154 WLISFWFERPSAASAGKKAFIVNRIGDAGFILGTALIVDHLHSVSYSVILPEAHRLSSGT 213 Query: 207 ASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDL 265 AV LL F K+ +PL WL A P+ SAL + MV G+F + +++ + Sbjct: 214 LEAVALLFFLAAVGKSAQLPLFVWLLDAM-EGPTPVSALIHAATMVTAGVFLMARLSAFV 272 Query: 266 LAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVG 325 ++ IGAI+A + + A ++ DIK+++A+STV +G ++L +G Sbjct: 273 TPAHDA----ATVIAWIGAITAFVAAMAATSQHDIKKIVAYSTVSQLGYMMLGIGTG--- 325 Query: 326 LSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRL-HTHDMEKMGALAKRMPWT 384 + ALF ++ HA +K L+FL +G++I L D+ +MGAL + MP T Sbjct: 326 -----------AYVAALFLMVTHAFYKALIFLASGSVIHSLDGEQDVRRMGALRRFMPIT 374 Query: 385 AAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAV 444 A ++ L+I+ +PP +GF S+ ++ F+ P+ + VT L Sbjct: 375 AVTMILAWLSIAGVPPFSGFFSKGSVLEAAFA-----------HQPVLWAIGVVTAVLTA 423 Query: 445 MCFVKMYGITFCGAPRSTH---AEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMH 501 ++ + F PR E P M V +++LA VL L + Sbjct: 424 YYMGRLVYVVFYNEPRYQEVLGERSPHESPRVMTVPLVVLAVAAVLGGLIN-------LP 476 Query: 502 IAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRR 561 G +LV +LL +A L GL W R Sbjct: 477 FGSLDFLDRFLAPVFGPSLVAVHLSGVARAALLATDAVAGLLGVGLAWQLWGHRWRRPE- 535 Query: 562 TGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQST 621 + R +T A Sbjct: 536 -----------------------------LEPMVLQRGWYVDATYDRVIARPMTELALEA 566 Query: 622 EPFWDERVIRPIVSATQRLAKEI----QHLQSGDFRLYCLYVVAALVVLL 667 + D +VI V + A+ I + +Q+G R Y L +VA +VV++ Sbjct: 567 DEVVDPKVIDGAVMSVAWAARRIGGLGRRVQTGLVRSYLLLMVAGIVVVM 616 >UniRef50_Q12ZH4 Na+/H+ antiporter subunit n=2 Tax=Methanosarcinaceae RepID=Q12ZH4_METBU Length = 513 Score = 299 bits (767), Expect = 2e-79, Method: Composition-based stats. Identities = 130/531 (24%), Positives = 234/531 (44%), Gaps = 43/531 (8%) Query: 1 MDALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTL 60 + L + + + S +FL + L+ SL +I II + + G+ + Sbjct: 3 ISMTHLPILLVAVPILMSALMIFLRSNANVQKWLNVSVSLAMMLISIILLLQVWNGGIQV 62 Query: 61 VARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNI 120 + + L D LS+ MV++ S++ + LYSL Y+ + N+ Sbjct: 63 YE--VGEWGKYGIVLVADLLSSGMVVLSSIVSFLALLYSLDYIEGRS--LNSTYHSLFNL 118 Query: 121 FIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDK------TSINAGMLYFFIAHAG 174 +A + + + F V FE++ L+S LVIA + + A Y + G Sbjct: 119 LVAGLNGTFLTGDIFNMFVFFEILLLASCGLVIANEKGGVTKSSDKMEATFKYLILNMIG 178 Query: 175 SVLIMIAFLLMGRESGSLDFASFR-------TLSLSPGLASAVFLLAFFGFGAKAGMMPL 227 S +++IA + G+L+ A P A+ LL FG KA + P+ Sbjct: 179 SFVMLIAVASLYATVGTLNMADLSVKISTMSAAGTLPWHIYAIALLFIVVFGNKAAIFPM 238 Query: 228 HSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISA 287 H WLP HP APS SA++SGVM+K+G +GIL++ + +++ + ++ Sbjct: 239 HYWLPDVHPTAPSPISAMLSGVMIKVGAYGILRIFFLIFRDA--LFLLQPIIILLALVTI 296 Query: 288 LLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLN 347 ++G + A+ + D+K+LLA+S+V +G + L +G+ +V L AL ++ N Sbjct: 297 IIGAVSAVGQNDVKKLLAYSSVSQIGYVFLGIGIG-----------SVYALAAALVYMAN 345 Query: 348 HALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISE 407 HA+ K +LFL +G II T DM MG + K P + A LIG ++I+ +PP+ GF+++ Sbjct: 346 HAIAKSMLFLTSGGIIHHAGTRDMRHMGGMNKTSPIMSIAFLIGAMSIAGLPPMGGFVAK 405 Query: 408 WYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTH---A 464 + + + L+ I + + + + + + F G R Sbjct: 406 FILFDA----------GLRAEYYIPVAIALFFAVFTLFYMFRAWLLMFWGETRDVEEYGE 455 Query: 465 EEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVA 515 + + + + ++ LAAL + + A L IA + P A Sbjct: 456 YSSHKPSLMIALPIVSLAALVFIFGVYAEPLIALAQAIAEQLIDPQPYIDA 506 >UniRef50_D1Y0I6 Putative NADH dehydrogenase subunit L n=1 Tax=Prevotella bivia JCVIHMP010 RepID=D1Y0I6_9BACT Length = 686 Score = 299 bits (767), Expect = 2e-79, Method: Composition-based stats. Identities = 150/698 (21%), Positives = 258/698 (36%), Gaps = 95/698 (13%) Query: 12 ILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAPPFEFA 71 +L+ + + + +V G + G Sbjct: 41 VLFALSLYTAYHYFFYTGEYTAMGETFKVVNGRLDGGHGAYPTVTVFNFTWLKFTELLTF 100 Query: 72 DLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGK--------GAAAMGFFMNIFIA 123 ++ R+ +S M++VI+ + + +YS YM E G ++++F Sbjct: 101 NIGFRLSPISVMMLVVITTVSFMVHIYSFGYMAERGEHYEFEEYEHGFQRFYAYLSMFTC 160 Query: 124 SMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDK-TSINAGMLYFFIAHAGSVLIMIAF 182 SM+ L+V N F + +E++ + S+ L+ K T+++A F + + +I Sbjct: 161 SMLGLVVATNIFQMYLFWELVGVCSYLLIGFYYPKHTAVHASKKAFIVTRFADLFFLIGI 220 Query: 183 LLMGRESGSLDFA---------SFRTLSLSPGLASAV---FLLAFFGFGAKAGMMPLHSW 230 L G+ ++ + L+ P A A+ L F G K+ M PLH W Sbjct: 221 LFFSFYVGTFNYDLNVNPELTVTLAKLATDPTTAWAIPTALFLMFIGGAGKSAMFPLHIW 280 Query: 231 LPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALL 289 LP A P+ SAL + MV G+F + + L + I A +A Sbjct: 281 LPDAM-EGPTPVSALIHAATMVVAGVFQVASLLPIYLQFGAQEQL--HWIAWIAAFTAFY 337 Query: 290 GVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMV------GLSLHDPLLTVVGLLGALF 343 A A++DIKR LA+ST+ + +L+A+GV S +G + A+F Sbjct: 338 AAAVACAQKDIKRGLAFSTISQIAYMLVALGVCFYDAKEGAFGSHGFLHHGGLGYMAAMF 397 Query: 344 HLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNG 403 HL HA+FK LLFL +GAII + ++ E MG L K MP T LIGCLAI+ IPP G Sbjct: 398 HLFTHAMFKALLFLCSGAIIVIIGSNFKEYMGGLHKYMPITNICFLIGCLAIAGIPPFAG 457 Query: 404 FISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCG----AP 459 F S+ + +L E AL+ ++ + G+ ++Y + F G Sbjct: 458 FFSKDEIISACNALPGAEGQALK-------WIMTLVAGMTAFYMFRLYYVIFWGQSYYEL 510 Query: 460 RSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIA 519 H QEVP M ++ LA + + L ++ Sbjct: 511 DPEHRRRPQEVPFVMWGPLVFLAIISCVAGLIP---------------------FGHFVS 549 Query: 520 LVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPS 579 ++ + ++ ++A + L ++ Sbjct: 550 ANGLSYDIHIDWNIATTSIIAAVIGISLATYMYMGKKQP--------------------- 588 Query: 580 GNGVMQPLRVVFSALFRL---RQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSA 636 V L+ L + R LD + + F D RVI + Sbjct: 589 ---VADALQRAMPNLHKAALNRFYLDNVWQFFTHKIVFRLFSMPIAWF-DRRVIDGTFNF 644 Query: 637 TQR----LAKEIQHLQSGDFRLYCLYVVAALVVLLIAI 670 + ++ QSGD R Y ++ + + L + + Sbjct: 645 LAWGTNEAGESVRSWQSGDVRQYVVWFITGTIALTLVL 682 >UniRef50_Q3AB32 Carbon monoxide-induced hydrogenase, membrane anchor subunit n=2 Tax=Clostridia RepID=Q3AB32_CARHZ Length = 1274 Score = 299 bits (767), Expect = 2e-79, Method: Composition-based stats. Identities = 144/471 (30%), Positives = 235/471 (49%), Gaps = 36/471 (7%) Query: 77 MDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFW 136 DSLS F L+++ + + +LYS+ Y + A FF+ + + +++ L Sbjct: 284 FDSLSKFFALLMAFIGFLVTLYSVGYFKAKP--YANRYFFFLLLMLGTLLGLTTSKELGN 341 Query: 137 FIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFAS 196 F V +E+M+ +S+FLVI Q + ++ AG YF + +G+ ++++A L + + GSLD + Sbjct: 342 FYVFWELMTWTSYFLVIQEQTQKALRAGFKYFIMCTSGAYIMLLAILTLHVKLGSLDLTT 401 Query: 197 FRT--LSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIG 254 LSPGL V + GFG KAG++PLHSWLP AHP APS SA MSG++ K G Sbjct: 402 ISANLQVLSPGLMLVVLGMFIIGFGVKAGLVPLHSWLPDAHPVAPSSISAPMSGILTKTG 461 Query: 255 IFGILKVAMDLLA--------QTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAW 306 I+G++++ + TG G ++ +GA + L G + AL + D+K++LA+ Sbjct: 462 IYGLVRILFVVFGVSLLTKVGTTGQFSTIGFIISLLGAFTLLYGEIMALLQTDVKKMLAY 521 Query: 307 STVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRL 366 ST+ VG I++ +GV T + +GAL+H+LNHA+ K LLFL GA+I R+ Sbjct: 522 STMAQVGEIVITLGVG-----------TYLSFIGALYHILNHAIMKNLLFLAVGALILRV 570 Query: 367 HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQ 426 + ++ K+ + + MP T+ IG LAI +PP NGFIS++ +L + L Sbjct: 571 KSQEINKLKGIGRVMPVTSLCFSIGILAIMGLPPFNGFISKFLMLYALVQSGHLALAGLI 630 Query: 427 LAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCV 486 L G I L ++K+ I F QE P TM++ +++L L + Sbjct: 631 LLGSI----------LGGFYYLKVVRIIFFEKYEGPAR---QEAPITMLIPIVILTGLSI 677 Query: 487 LIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLL 537 + I +A V + + + P + L Sbjct: 678 FNGVYPQAGLALIKPVADLIAANGHMAVTAIPKITISWPIVTLIPMVGALF 728 Score = 259 bits (662), Expect = 3e-67, Method: Composition-based stats. Identities = 126/547 (23%), Positives = 230/547 (42%), Gaps = 55/547 (10%) Query: 12 ILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAPPFEFA 71 I+ L + +LF R ++K+SG ++ V + + Sbjct: 717 IVTLIPMVGALFAYFFGRRSVKVSGWLAVATMVATLATVFAASTG--------------- 761 Query: 72 DLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVM 131 +D S +I+ + V+ LYSL YM + F + I ++ + V Sbjct: 762 -----LDIFSRSFAFLIAFIGVLNLLYSLGYMEHEHAQN--RFYLFFTLMIGGLLGVAVS 814 Query: 132 DNAFWFIVLFEMMS-LSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESG 190 + F F +E+MS + +F++I + ++ G YF + G+ L+++ L++ +G Sbjct: 815 KDLFNFFAFWEIMSSWTLYFVIIHEETSEALREGFKYFIFNYVGANLLLLGLLVLTVNAG 874 Query: 191 SLDFASF--RTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSG 248 + + + R +L GL + +L GF KA M+P P AP+ S +S Sbjct: 875 TFEMSELAGRLSALPTGLVALGLILMLIGFAMKAAMLPFRIDYQMHPPTAPTPVSGYISS 934 Query: 249 VMVKIGIFGILKVAMDL--------LAQTGLPLWWGILVMAIGAISALLGVLYALAEQDI 300 V++K FG++K+ L Q G ++ + ++ L+ AL + + Sbjct: 935 VLLKSAPFGMVKLFYVFGGVALLSKLGQLGDMPSLMYILAWVSGLTILMAAALALLQSGM 994 Query: 301 KRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAG 360 KRLL + TV +G I+L + + L +NH LFK LLFL AG Sbjct: 995 KRLLIYHTVSQMGYIILGISLGSSLGLAGGLLHL-----------VNHMLFKNLLFLVAG 1043 Query: 361 AIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRV 420 AI+ + D++++G + ++MP T + IG +I+ IPP NGF S+W +++ V Sbjct: 1044 AIMVKTGIGDLDRLGGIGRKMPVTLSVFAIGTFSIAGIPPFNGFTSKWLIYEASMEKGYV 1103 Query: 421 EAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLL 480 ++ + L + F+K F G E E P TM + M++ Sbjct: 1104 ----------FLALLSLLASVLTLASFLKFLHSAFFGQI-PKELENVTEAPWTMQIPMVI 1152 Query: 481 LAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLA 540 LA LC++ + I I + TP + GI GT++ + +++ + Sbjct: 1153 LAVLCMVFGIFPGIPLATIAAIERSLGLTPVSVTLFGIDSGLGTWNAGIIAVFMVIAFIV 1212 Query: 541 MPLLPGL 547 + + Sbjct: 1213 GLSIYFV 1219 Score = 93.4 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 61/320 (19%), Positives = 116/320 (36%), Gaps = 28/320 (8%) Query: 280 MAIGAISALLGVLYALAE-QDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGL 338 G + L+G L AL +++ + L S++ +G +LL +G T VG Sbjct: 14 ALFGVMLLLVGELVALLRWKNLIQFLIISSIAEIGFVLLGLGTG-----------TYVGT 62 Query: 339 LGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAI 398 GAL HL + +GL+FL A A I R H+ +EK+ + ++MP T G ++ + Sbjct: 63 SGALLHLEYQIVMRGLVFLAAAAFIFRGHSASVEKLQGIGRKMPVTTTLFGFGLFSVMGL 122 Query: 399 PPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGA 458 P G IS++ + + A+ G I + + F++++ I Sbjct: 123 SPFKGSISKFLIIYAAIESGHWLSAAIATFGSI----------IEAVYFLQVFQILCFED 172 Query: 459 P--RSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVAS 516 P AEE +E ++ +L+L L L+ L A T Sbjct: 173 PVQEGPGAEEVRETSPGLMAVLLVLGVLTALMGLIPEPFIHGAERAAAVLLG---GTGPD 229 Query: 517 GIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACG-YGWENA 575 + + + + V + ++ + + W G + + Sbjct: 230 QLPVFESPWSSLVLVPYVGGFIVYLAGCFSQALRNILAVGITGTTVYLTWLAGNFDSLSK 289 Query: 576 MAPSGNGVMQPLRVVFSALF 595 + L ++S + Sbjct: 290 FFALLMAFIGFLVTLYSVGY 309 >UniRef50_B8DNI8 NADH dehydrogenase (Quinone) n=4 Tax=Desulfovibrio vulgaris RepID=B8DNI8_DESVM Length = 1264 Score = 299 bits (766), Expect = 2e-79, Method: Composition-based stats. Identities = 149/517 (28%), Positives = 256/517 (49%), Gaps = 41/517 (7%) Query: 37 ITSLVGGVIGIISGITQLHAGVTLVARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCS 96 + IG+ SG + AGV LVA + + D T +D LS ++I+ + +V + Sbjct: 241 AGAFAVWCIGLASGRARALAGVVLVAA-SVALTWTDTT--IDPLSRLFGVIIAGIGLVVA 297 Query: 97 LYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQ 156 +YS Y+ + + A FF+ + S+ L + + F V +E+M+ SS+FLV Sbjct: 298 VYSTGYI--HHDRRAGGYWFFLLLMCGSLSGLALARDFGGFYVFWELMTFSSYFLVAHEA 355 Query: 157 DKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRTLSLSP--GLASAVFLLA 214 + +A + YF + AG+ ++ F+L+ ++G+LDFA+ L+ + + +LA Sbjct: 356 TDKAFHAAVKYFVMCVAGACAMLPGFMLLSAQAGTLDFAALAGLAATLPAPVVKGAVVLA 415 Query: 215 FFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQT----- 269 F GF KAG++P H WLP AHPAAPS S +SG++ K G++G +++ + + Sbjct: 416 FVGFAVKAGLVPGHGWLPDAHPAAPSSISGPLSGILTKTGVYGTVRLMLAVFGSAVLLKA 475 Query: 270 ----GLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVG 325 G G+LV A+G + L G L AL + D+KRLLA+ST+ VG I + +G+ Sbjct: 476 GESAGGFSSMGLLVTALGTATMLYGELMALKQDDLKRLLAYSTMGQVGEIFMVIGLG--- 532 Query: 326 LSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTA 385 T + G+L H+LNHA+ K LLFL AG +I R + + + +A+ MP+TA Sbjct: 533 --------TWLATTGSLLHVLNHAIMKNLLFLCAGGLILRAGSKKLADLAGMARVMPFTA 584 Query: 386 AACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVM 445 ++G ++I +PP NGF+ ++ Q+L + A+ L G +A + Sbjct: 585 GCMVVGLISIMGLPPFNGFVGKYLMLQALVAAGHPAVAAVLLLGSLAGCV---------Y 635 Query: 446 CFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHA 505 + + F + QE P +M VA +LAALC+++ + + +A Sbjct: 636 YMRIVRTLVF----QPYTGPMVQEAPVSMRVATGVLAALCLVLGVLPQLGLSLVTPVADM 691 Query: 506 FTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMP 542 A + ++ T+H V +L ++ + Sbjct: 692 LAG-AGKLDAQALPMLAVTWHPFVLVPMLGAVVPFLL 727 Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats. Identities = 127/520 (24%), Positives = 226/520 (43%), Gaps = 36/520 (6%) Query: 30 LAIKLSGITSLVGGVIGIISGITQLHAGV-TLVARFAPPFEFADLTLRMDSLSAFMVLVI 88 + + ++G V+ + + AG+ T + +DS+S LV+ Sbjct: 708 VTWHPFVLVPMLGAVVPFLLRRDRKAAGLSTAITLAVAAIAVVVFGRGLDSISFAFALVV 767 Query: 89 SLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMS-LS 147 ++ + Y++ YM F + ++ + ++ F F +E+MS S Sbjct: 768 PVIGCLNMFYAVGYMEH--SHTQWRFYTFFLFMVGGLMGVAASNDLFGFFTFWEIMSSWS 825 Query: 148 SWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRTL--SLSPG 205 +F+++ ++ ++ G YFF G+ + + +++ +G F + R+ ++ Sbjct: 826 LYFVIVHEENPAALREGFKYFFFNVLGAAFLFLGVVMLSSMAGDPSFGAVRSALPTMPVA 885 Query: 206 LASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDL 265 LA+ L GF KA +P + AP+ S +S V++K +FG+ K+ L Sbjct: 886 LAATAVALMAIGFTMKAAQLPFRIDVQMHPATAPTPVSGYISSVLLKSALFGLAKLFFVL 945 Query: 266 LAQ---TGLPLWWG-----ILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILL 317 TGL WG + +G I+ ++ L A+ + D+K +L +STV +G +++ Sbjct: 946 GGAGFFTGLASQWGQPQVMYAIAWVGGITIVMAALLAVMQSDLKLVLIYSTVSQLGYMVV 1005 Query: 318 AVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGAL 377 V + T +G+ G + HL+NH LFK LLFL AG++I H H ++++G + Sbjct: 1006 GVALG-----------TPLGMAGGMLHLVNHVLFKDLLFLVAGSLILCTHKHSLDELGGI 1054 Query: 378 AKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLA 437 +RMP T IG L++ +PP NGF S+W + +L + V L LAG + Sbjct: 1055 GQRMPVTLTMFAIGALSVVGVPPTNGFASKWILYHALMAEGEVALALLSLAGSV------ 1108 Query: 438 VTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAP 497 L + F K F G P S E P M+V M +LAA C++ + Sbjct: 1109 ----LTLAYFAKFLHSAFLGRP-SPELAHVHEAPRIMLVPMGILAAGCIITGVFPGLPLL 1163 Query: 498 KIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLL 537 I + G+A G F+ LL + Sbjct: 1164 AIDMMGRELGFAGLMVAPWGVASGAGAFNATALAVLLAVA 1203 >UniRef50_Q39QB8 NADH-plastoquinone oxidoreductase, chain 5 n=8 Tax=Deltaproteobacteria RepID=Q39QB8_GEOMG Length = 669 Score = 299 bits (766), Expect = 2e-79, Method: Composition-based stats. Identities = 143/715 (20%), Positives = 269/715 (37%), Gaps = 103/715 (14%) Query: 7 LTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAP 66 W + L+ + + GL IK + +G ++ S + + L++R A Sbjct: 4 YVWLIPLFPLIGVV---INGLLGKKIKNETVIGGIGSLMVFGSFLVSFGILIELLSRSAE 60 Query: 67 PFEF--------------ADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAA 112 F A++ +D LSA M++V++ + + +YS+ YM + +G Sbjct: 61 ERVFEKVLFTWIKSGNFNAEIGFLIDPLSALMIMVVTGVGFLIHVYSIGYM--HGEEGFY 118 Query: 113 AMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIAR-QDKTSINAGMLYFFIA 171 ++N+F SM+ L++ +N V +E + L S+ L+ K++ +AG F + Sbjct: 119 RYFTYLNLFTFSMLLLVLGNNLLLMFVGWEGVGLCSYLLIGYYFHKKSAGDAGKKAFVMN 178 Query: 172 HAGSVLIMIAFLLMGRESG------SLDFASFRT---LSLSPGLASAVFLLAFFGFGAKA 222 G ++ + G +++F L G+ + + L F G K+ Sbjct: 179 RVGDFGFLLGVFTLYWYLGQNHNVWTINFRQLAANAHLLPVGGVVTVIALCFFLGATGKS 238 Query: 223 GMMPLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMA 281 +PL++WLP A P+ SAL + MV G++ I ++ + + +V Sbjct: 239 AQLPLYTWLPDAM-EGPTPVSALIHAATMVTAGVYMIGRLNFVYIRSHETMM----IVAI 293 Query: 282 IGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGA 341 +GA +A+ A+ DIKR+LA+STV +G + LA+GV Sbjct: 294 VGAATAIFAATIGTAQNDIKRVLAYSTVSQLGFMFLAMGVG--------------AFTAG 339 Query: 342 LFHLLNHALFKGLLFLGAGAIISRLHT-----------HDMEKMGALAKRMPWTAAACLI 390 +FHL+ HA FK LFLG+G++I +H DM MG L K+MP T L+ Sbjct: 340 IFHLMTHAFFKACLFLGSGSVIHSMHHALHHAHSHDDPQDMRNMGGLKKQMPITFLTFLV 399 Query: 391 GCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKM 450 +AI+ IP +GF S+ F+ + I A+ G ++ Sbjct: 400 STIAIAGIPGFSGFFSKDEILWQAFANPLHGDL-----NIILWATGAIAAGFTAFYMFRL 454 Query: 451 YGITFCGAPR--STHAEEAQEVPNTMIVAMLLLAALCVL-------------IALSASWL 495 +TF G R E P + +++L L V+ ++L Sbjct: 455 VFMTFFGECRIVEKAKSHLHESPLVITFPLMVLGLLAVVGGYVGIPKLIGELFGGIPNYL 514 Query: 496 APKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSR 555 + + +A G A + + +++ L+ + + LY + Sbjct: 515 EHYLEPVFKGSEEFMAQQLAHGAAHHSPALEWGLMGTSVVIALIGISIAFFLYVV----- 569 Query: 556 RAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVT 615 + A R V++ + + K L + Sbjct: 570 ----------------SPSIPAKFTAAFPALHRAVYNKWYVDELYDFLFVNPCKALGNGL 613 Query: 616 ARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLIAI 670 + + + ++++Q+G Y L + +VV++ Sbjct: 614 WKGFDVVVVDGVVNGVAAI--VKGFGGALRNIQTGYVHNYALGMSLGVVVIVAFY 666 >UniRef50_Q67NV3 Na+/H+ antiporter subunit n=1 Tax=Symbiobacterium thermophilum RepID=Q67NV3_SYMTH Length = 754 Score = 298 bits (764), Expect = 4e-79, Method: Composition-based stats. Identities = 122/510 (23%), Positives = 221/510 (43%), Gaps = 34/510 (6%) Query: 49 SGITQLHAGVTLVARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEG 108 + L ++LV + P DL++ +D L+I+ + + LYS+ Y+ E Sbjct: 25 FVLVVLTPEMSLVIPWVPQLGI-DLSIHVDGWGRLFALLIAGIGTLVVLYSIPYLGARED 83 Query: 109 KGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKT-SINAGMLY 167 G ++ +F+ +M+ ++ N V +E+ S+SS+ L+ + + + Sbjct: 84 LGK--FYAYLLLFMGAMLGVVYAGNLMLMYVFWELTSISSFLLIGFWNTRDDAQYGALKA 141 Query: 168 FFIAHAGSVLIMIAFLLMGRESGSLDFASF---RTLSLSPGLASAVFLLAFFGFGAKAGM 224 I G + ++ ++G G+ + ++ + L L + +L G K+ Sbjct: 142 ILITFGGGLCMLGGLAILGTVGGTFELSALLAKQAELLGHPLVTVALVLLLIGAFTKSAQ 201 Query: 225 MPLHSWLPRAHPAAPSHASA-LMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIG 283 P H WLP A AAP+ SA L S MVK G++ I ++ W +V A+G Sbjct: 202 FPFHIWLPDAM-AAPTPVSAYLHSATMVKAGLYLIGRLWPIFHTHP----LWVPVVAAVG 256 Query: 284 AISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALF 343 ++ ++G A+ + D+K +LA ST+ +G+I+ G+ T A F Sbjct: 257 MVTMVVGSFLAVQKTDLKAVLALSTISQLGLIMWLFGLG-----------TPEATQAAAF 305 Query: 344 HLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNG 403 HLLNH+ FK LLF+ G I + T ++ + L + MP +A ++G +++ +P LNG Sbjct: 306 HLLNHSTFKALLFMVVGIIDHQTGTREIPLLSGLRRAMPVSAGLAMVGAASMAGVPLLNG 365 Query: 404 FISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTH 463 F+S+ ++ S A AL G L + + + + G P T Sbjct: 366 FLSKEMFLTAVHGSSMGAAGALVATG---------ASLLTTLYCLILGHKIWFGEPHET- 415 Query: 464 AEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPG 523 + +E +++V LLLA + V + + + I+ A A PA + Sbjct: 416 PDVPEEGSPSILVPPLLLAVIIVAVGIYPGLVESAIVTPAVAAVLQGPADLPHIALWHGF 475 Query: 524 TFHTQVTPSLLLLLLLAMPLLPGLYWLWCR 553 T +T L +LA LP + + R Sbjct: 476 TPALLMTAIALGGGVLAYAGLPRVLAAFRR 505 >UniRef50_Q2YA95 Proton-translocating NADH-quinone oxidoreductase, chain L n=64 Tax=Bacteria RepID=Q2YA95_NITMU Length = 662 Score = 298 bits (764), Expect = 4e-79, Method: Composition-based stats. Identities = 157/679 (23%), Positives = 261/679 (38%), Gaps = 73/679 (10%) Query: 7 LTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAP 66 L W + A L L G + +++G +S + + G+ + P Sbjct: 4 LLWLIPTLPLAGFLLLVLGGNHLGHRSI----AMIGTGSVALSALVAILIGIDFITAPPP 59 Query: 67 PFEF--------------ADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAA 112 F F + +D+LS MV+V++++ + LYS +M EG A Sbjct: 60 GFVFRQEAWTWIAVAGFSPGIVFYLDALSLVMVVVVTVISFLIHLYSTEFMSGDEG--YA 117 Query: 113 AMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIAR-QDKTSINAGMLYFFIA 171 +MN+F+ SM L++ DN + + +E + L S+ L+ +D + A F + Sbjct: 118 RFFAYMNLFVGSMCILVLADNLLFLYLGWEGVGLCSYLLIGFWYRDPANGRAARKAFIVT 177 Query: 172 HAGSVLIMIAFLLMGRESGSLDFASF-----RTLSLSPGLASAVFLLAFFGFGAKAGMMP 226 G + I F L+ G+LD + + LA L G K+ +P Sbjct: 178 RVGDTAMAIGFFLLFTHLGTLDIQPLMQRATQEWPVGSELAILAAALLLGGAAGKSAQLP 237 Query: 227 LHSWLPRAHPAAPSHASALM-SGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAI 285 L +WLP A A P+ SALM + MV G++ I + + + V A+GA+ Sbjct: 238 LQTWLPDAM-AGPTPVSALMHAATMVTAGVYLIARTHALFVLAPAVQF----AVAAVGAL 292 Query: 286 SALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHL 345 + LL ALA+ DIKR+LA+ST+ +G + LA+GV A+FHL Sbjct: 293 TLLLAGFSALAQNDIKRVLAYSTISQLGYMFLALGVG--------------AWSAAIFHL 338 Query: 346 LNHALFKGLLFLGAGAIISRLH-THDMEKMGALAKRMPWTAAACLIGCLAISAIPP-LNG 403 + HA FK LLFL AG +I LH HD+ +MGAL K++P T LIG +++A+P G Sbjct: 339 VTHAFFKALLFLSAGVVIMSLHEEHDIFRMGALRKKLPVTFWTFLIGSASLAALPLVTAG 398 Query: 404 FISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTH 463 F S+ +A + + P L + ++ + F G R+ Sbjct: 399 FYSKDLIL--------WQAWSSRGGNPWLWAAGWGGAILTGLYIFRVVFLVFFGEARTVA 450 Query: 464 AEEAQEVPNTMIVAMLLLAALCVLIALS--ASWLAPKIMHIAHAFTNTPPATVASGIALV 521 E + + V +++LAA V+ S+L + PP V Sbjct: 451 PPEIRRPGRRITVPLIVLAAFSVVGGWIETPSFLGNLTLFSDFIQHALPPTQV------- 503 Query: 522 PGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGN 581 H ++L LL L + + R G + G Sbjct: 504 ---VHDSKNDEIVLELLAIAASLGSIALAYLLFLRYPAFLHGLMLVPALASIRKLWHFGW 560 Query: 582 GVMQPLRVVFSALFRL-----RQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSA 636 G +F + ++ + L + + + + + Sbjct: 561 GFDSFYEFLFVRPYLWLAHADQRDVIDDLYRMSFSCTLRCLQKINRHDLIDNLYSGLAGL 620 Query: 637 TQRLAKEIQHLQSGDFRLY 655 + + QSG R Y Sbjct: 621 CLFFHRTLSATQSGQVRRY 639 >UniRef50_Q7NHD8 NADH dehydrogenase subunit 5 n=1 Tax=Gloeobacter violaceus RepID=Q7NHD8_GLOVI Length = 605 Score = 298 bits (763), Expect = 5e-79, Method: Composition-based stats. Identities = 158/570 (27%), Positives = 251/570 (44%), Gaps = 48/570 (8%) Query: 1 MDALQLLTWSLILYLFA-SLASLFLLGLDRLAIKLSGITSLVGGVIGIISG---ITQLHA 56 M++L W + LY A +L SL +++ L + ++ + ++ A Sbjct: 1 MESLVQFGWLIPLYCLAGALFSLPWALTQSKGQRIAAFGGLFFTGLALLHASLMLPEVLA 60 Query: 57 GVTLVARFAPPFEFADLTLRM----DSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAA 112 G RF P +F L + + + L+A +++++ + ++ LYSL YM A Sbjct: 61 GAGGTFRF-PWIDFGTLNIEVSGLINPLTAGTLVLVAGVSLLVQLYSLGYMDHEP--RLA 117 Query: 113 AMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLY-FFIA 171 ++ F +M+ L++ DN +E+M LSS+ LV K + A F Sbjct: 118 RYYGLLSFFTMAMLGLVLSDNLLAMYGFWELMGLSSYLLVGFWWSKPAAAAAAKKAFLTT 177 Query: 172 HAGSVLIMIAFLLMGRESGSLDFASFR----TLSLSPGLASAVFLLAFFGFGAKAGMMPL 227 G L++I LL+ +G+L+ + T +++ LA+ + LL F G K+ PL Sbjct: 178 RVGDFLLLIGILLLYVNAGTLEITALGEWAETATIAAPLATLIVLLLFAGPVGKSAQFPL 237 Query: 228 HSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAIS 286 H WLP A P+ ASAL + MV G+F + ++ L ++V GAI+ Sbjct: 238 HVWLPDAM-EGPTPASALIHAATMVAAGVFMVARLEPVF----ALSSTALMVVAYTGAIT 292 Query: 287 ALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLL 346 AL L A A+ DIKR+LA+ST+ +G + +A+GV A+FHL Sbjct: 293 ALGSALMATAQNDIKRVLAYSTISQLGYMFMALGVGNT--------------EAAMFHLF 338 Query: 347 NHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFIS 406 HA FK +LFLGAG++I HT DM +MG L RMP TA IG LA++ + P GF S Sbjct: 339 THAFFKAMLFLGAGSVIHGAHTQDMREMGGLMGRMPVTAFTYGIGVLALAGVFPFAGFWS 398 Query: 407 EWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEE 466 + +L M +T GL + Y + F G P S + Sbjct: 399 KDAILHALEKAELYP----------VFAMGLLTAGLTAFYMARQYILVFLGKP-SEKSSR 447 Query: 467 AQEVPNTMIVAMLLLAALCVLIA-LSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTF 525 A E TM + +++LA L W + + ++ TV +AL F Sbjct: 448 AHESTWTMSLPLVILAVPSAAAGWLGNEWFLKEELDTTLLVLSSGVVTVGFAVALAVYVF 507 Query: 526 HTQVTPSLLLLLLLAMPLLPGLYWLWCRSR 555 + + L+ + L LY SR Sbjct: 508 NLVPKSVVQALVPVRAALENRLYIDDFYSR 537 >UniRef50_Q9UYP1 Hydrogenase 4, component F or formate hydrogen lyase, subunit 3 n=1 Tax=Pyrococcus abyssi RepID=Q9UYP1_PYRAB Length = 499 Score = 298 bits (763), Expect = 5e-79, Method: Composition-based stats. Identities = 133/501 (26%), Positives = 249/501 (49%), Gaps = 33/501 (6%) Query: 9 WSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAPPF 68 L+ L S+ + G ++ + + + + + + + +V F Sbjct: 10 IPLVFAFALPLFSVVVGGNRKIIQAYALLGTGLTLISTFKLFQLTYSSSLPIVYTFGKWR 69 Query: 69 EFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVAL 128 + +D LS+ + LV ++L+ + ++YS Y+ KG + ++ + Sbjct: 70 APIGIVYEVDRLSSLIALVTAVLMFLIAIYSYRYLERE--KGLEWYYTLYLGLESGLLGV 127 Query: 129 LVMDNAFWFIVLFEMMSLSSWFLVIARQDKT-SINAGMLYFFIAHAGSVLIMIAFLLMGR 187 L+ +AF V+ E+ S++++ LV+ +D+ S+ AG+ Y I G+ + +A + Sbjct: 128 LLTGDAFNLFVMIEVTSIAAYALVMFYRDRKDSVLAGLKYALIGAVGTTMYFLALGVFYG 187 Query: 188 ESGSLDFASFRTLSLSPG----LASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHAS 243 G+++FA S G +S +LA + F KA + P H WLP AHPAAPS S Sbjct: 188 TFGTVNFADLSEKLHSSGNVVLASSVALVLATWAFLIKATIFPNHFWLPEAHPAAPSPIS 247 Query: 244 ALMSGVMVKIGIFGILKVAMDLLAQTGLPL-WWGILVMAIGAISALLGVLYALAEQDIKR 302 A++SG++V +G++ +++ L + + W ++ +GAIS++ G L ++D+KR Sbjct: 248 AILSGLVVNVGVYAMIRFLYTLYSGLSWIIGWLSFAIIILGAISSIFGALMMNTQRDVKR 307 Query: 303 LLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAI 362 L+A+ST+ ++G +L+AVGV T +GL ALFHL+NHA+ K LLFL G Sbjct: 308 LVAYSTIMHMGYLLMAVGVG-----------TQLGLQAALFHLINHAIAKALLFLAVGVF 356 Query: 363 ISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEA 422 I + +++ + L ++MP T + I L++ IPPLN F S+ + +L S Sbjct: 357 IHVAGSRNIDDLAGLGRKMPITTFSLAIATLSLVGIPPLNVFFSKLLLFNALLEKS---- 412 Query: 423 VALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLA 482 +++AVT +A++ ++++ + G PR + +M + L+LA Sbjct: 413 -------FFLALVIAVTSVIALVAYMRVLYTLWLGKPREDLDVKE---SISMSMICLILA 462 Query: 483 ALCVLIALSASWLAPKIMHIA 503 +C+ I L A + K+++ A Sbjct: 463 LICIAIGLIAPIVLEKLINPA 483 >UniRef50_C0GJ41 NADH dehydrogenase (Quinone) n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJ41_9FIRM Length = 794 Score = 297 bits (762), Expect = 7e-79, Method: Composition-based stats. Identities = 142/562 (25%), Positives = 247/562 (43%), Gaps = 20/562 (3%) Query: 8 TWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAPP 67 ++L +L S + ++ + + IS + AG A P Sbjct: 104 LLVVLLPFAGALISGLIGRSNKDIRDCVATCTAFLTCVLAISMYPMVAAGEVSYA--LPE 161 Query: 68 FEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVA 127 F L R+D ++ S + + + YS YMR + F+ + + + Sbjct: 162 FMGLGLLFRVDFFGFVFAVMASFIWFLATFYSGEYMRHE--HASTRYYVFLLLSLGGTLG 219 Query: 128 LLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGR 187 + + + + FE M+L S+ LV+ Q + ++ AG Y ++ G + +++A +++ Sbjct: 220 VFLAGDFLSLFLFFEAMTLFSYVLVVHAQSEEAMAAGRNYLYMGIFGGLCLLVAIMMVTM 279 Query: 188 ESGSLDFA-SFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALM 246 +G+ A +L+ + L F GFG KAG PLH WLP+AHP AP+ ASAL+ Sbjct: 280 HAGTTAIAPGLESLADMGTMGYVAAALFFIGFGIKAGAAPLHIWLPQAHPVAPTPASALL 339 Query: 247 SGVMVKIGIFGILKVAMDLL--AQTGLPLW-----WGILVMAIGAISALLGVLYALAEQD 299 SG+M+K G +GI++V L AQ PLW +G ++ G ++ + AL ++ Sbjct: 340 SGIMIKTGAYGIIRVFTLLYTPAQGESPLWYTTEQFGYALIWFGMVTMFTAAVLALVQRH 399 Query: 300 IKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGA 359 KR+LA+S+V +G IL+ +G A +G G +H+LNHA FK +FL Sbjct: 400 AKRVLAYSSVSQMGYILMGIGAAAYLGFDG-----AIGFAGWAYHILNHAFFKSAMFLMV 454 Query: 360 GAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSR 419 GAI R H+ D K+G L +R P TAAA L+ AI+ +P NG++S+ ++ + Sbjct: 455 GAIYLRTHSLDYSKVGGLWRRFPVTAAAFLVAGAAIAGVPGFNGYVSKTLLHHAIVDAWQ 514 Query: 420 VEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAML 479 + V + A + +TGGL V +++ F G R + A+E + Sbjct: 515 AQGV---TSLWYAEKIFTITGGLTVCYIARLFYSLFLGPARDGTHKYARETFLERTIFAG 571 Query: 480 LLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLL 539 A L ++ + I+ ++ F V L + + Sbjct: 572 FAAFLLYGGLAYSNVIERVILPMSSGFVYNDYYLNYVAKTGVWNVEDLSAIFISLGIGAV 631 Query: 540 AMPLLPGLYWLWCRSRRAAFRR 561 LL + + ++ + R Sbjct: 632 TFILLSRIDFALPLPQKLSVER 653 >UniRef50_C9RJK6 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RJK6_FIBSS Length = 647 Score = 297 bits (761), Expect = 8e-79, Method: Composition-based stats. Identities = 132/582 (22%), Positives = 229/582 (39%), Gaps = 59/582 (10%) Query: 10 SLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGV---------TL 60 L L ++ ++ G + + +S + TL Sbjct: 9 LFPLLGCIILGAIAIISSGSKKGPAEGFVGTLAVLFPALSFAGVALLSLNMPEGGVRETL 68 Query: 61 VARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNI 120 P D+ D LS M+L ++ + + +LYS+ YM + +G A ++N+ Sbjct: 69 CNWIDIPMFRVDIGFLFDGLSRIMLLFVTGIGSLIALYSIGYM--HGDRGFARYFAYINL 126 Query: 121 FIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDK-TSINAGMLYFFIAHAGSVLIM 179 F+ SM+ L++ DN + +E + L S+ L+ + +A F + G + + Sbjct: 127 FLFSMIVLVLSDNLLLTFLGWEGVGLCSYLLIGFWNKDIKNCHAANKAFIVNRVGDIGFL 186 Query: 180 IAFLLMGRESGS--------LDFASF----RTLSLSPGLASAVFLLAFFGFGAKAGMMPL 227 + L + GS +F S + L + S +L F G K+ +PL Sbjct: 187 LGMLCLVTIGGSAILNYDVLTNFISMVISGNHVDLVIPVLSIAGILFFIGCTGKSAQIPL 246 Query: 228 HSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAIS 286 +WLP A A P+ SAL + MV G++ + ++ L +++ +G ++ Sbjct: 247 LTWLPDAM-AGPTPVSALIHAATMVTSGVYLLARLGSMF----ALLPVVLDIIVVVGMLT 301 Query: 287 ALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLL 346 A + L + DIK++LA+ST+ +G + +A GV ++FH+ Sbjct: 302 AFWAAVAGLFQNDIKKVLAYSTISQLGYMFMASGVC--------------AFDASIFHVF 347 Query: 347 NHALFKGLLFLGAGAIISRL-HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFI 405 HA FK LFLGAGA+I L DM KMG L K+ P TA + LAI P +GF Sbjct: 348 THAFFKAALFLGAGAVIHALSGEQDMRKMGGLLKKTPVTACVMIFAFLAIVGFPGFSGFW 407 Query: 406 SEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRS--TH 463 S+ + +F + G V+ +T + + ++ +TF G+ R Sbjct: 408 SKDLILEKIFMSGTM--------GQAVYVVGLITAVITAVYMGRLIILTFFGSYRGSKES 459 Query: 464 AEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPG 523 E E P M++ M++LA V +L + I P A+ P Sbjct: 460 EEHIHEAPAVMLIPMVILAFGAVFAG----YLWADSIGIKFFAETLAPVVGAAQAYNTPA 515 Query: 524 TFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDA 565 L +A L + + + R + A Sbjct: 516 VVAHVNPVVFAALGTVAALLGMFIAYKIYANARIPAAKGSSA 557 >UniRef50_A8JYL0 Formate hydrogenlyase subunit D n=1 Tax=Thermococcus litoralis DSM 5473 RepID=A8JYL0_THELI Length = 603 Score = 297 bits (760), Expect = 1e-78, Method: Composition-based stats. Identities = 149/663 (22%), Positives = 291/663 (43%), Gaps = 67/663 (10%) Query: 12 ILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAPPFEFA 71 +L+ ++ + R +K G+ S + + I+ ++ ++ Sbjct: 1 MLFAVIFTIAIIIGLARREQVKAVGLLSALASLALIVEAFNGINVTYSIFG--------L 52 Query: 72 DLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVM 131 + T D++S F +++ + S+Y+ YM F+ SM +++ Sbjct: 53 EFTFMTDTISRFFCILVGISGFAVSIYTTEYME-----PRHLNLAAYPAFVLSMALIVIS 107 Query: 132 DNAFWFIVLFEMMSLSSWFLVI-ARQDKTSINAGMLYFF-IAHAGSVLIMIAFLLMGRES 189 + FI+ +E+M+++S+ L++ + AG++Y + + +++A + Sbjct: 108 RDFLGFIIFWELMTIASYILIVTYYDSPETKKAGLIYLVAMHAFNTAPLLLAIGAIYSNF 167 Query: 190 GSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGV 249 G+L F++ + + + V GF +KAG+ P+H WLP AHP APS+ SAL+SG Sbjct: 168 GTLSFSTLQ----GAYVPTWVIWAFLIGFMSKAGIFPIHFWLPEAHPVAPSNVSALLSGT 223 Query: 250 MVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTV 309 M+K+ I+G++++ + ++ + ++ ++G + AL ++DIKR++A+S+V Sbjct: 224 MLKMAIYGMIRIIELFPGSVVIAR----AMVVLAVLTIVIGAIMALVQKDIKRIMAYSSV 279 Query: 310 ENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTH 369 +N+G + LA+G + + D L + L L H NH +FK LLF+ +G ++ Sbjct: 280 DNMGYLFLALGAYI----MLDETLKKIAFLAVLLHTFNHLVFKNLLFMLSGNVLHATGRK 335 Query: 370 DMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAG 429 D+ + L K+MP+TAA ++G L++SA+PPLNGFIS+W +Q+ F V Sbjct: 336 DLG-LRGLGKKMPFTAAMMIVGILSVSAVPPLNGFISKWLIYQATFLSKDPLLVG----- 389 Query: 430 PIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIA 489 ++ L + ++K+Y I F G P E E M+ +LA LCV Sbjct: 390 --GGIVSLFASALTLTAYIKIYRI-FSGEP----NVETHEAAPLMLAGEAILAFLCVAAG 442 Query: 490 LSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYW 549 + +A + I+L TF+ + +LL ++LAM + Sbjct: 443 IFPGVIAGLV---------DVDIGNPWLISLGGVTFNALLFAGVLLSIILAMAIAL---- 489 Query: 550 LWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNK 609 + W G E + P+ L + ++++ L + Sbjct: 490 -------PTKKNLDTPWTTGEPAEKFEQRPEHMFA-PVSRGSEKLGIIGRKIEKKLSAFE 541 Query: 610 GLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLIA 669 G + + DE V P++ + ++ L S + L +++ Sbjct: 542 G-----WYSSKDMEYLDEMVFMPVIRLVAGTSYVMREL-SKNLNALLAMTFLVLFTIILT 595 Query: 670 IAV 672 +AV Sbjct: 596 MAV 598 >UniRef50_D2RZ77 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Haloterrigena turkmenica DSM 5511 RepID=D2RZ77_9EURY Length = 681 Score = 297 bits (760), Expect = 1e-78, Method: Composition-based stats. Identities = 119/499 (23%), Positives = 206/499 (41%), Gaps = 54/499 (10%) Query: 10 SLILYLFASLASLFLLGLD-RLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAPPF 68 ++ L+ A+ + G + GI + ++ + + +G T Sbjct: 14 AIALFPLAAFVISLVFGRQLPKKGAIPGIFATAASLLFSLWMFATVASGETYHETLYEWS 73 Query: 69 EFA------------DLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGF 116 A L +D LSA M++++SL+ + ++SL YM + G Sbjct: 74 AGAVTTEVGAEEIAFSFGLLIDPLSALMLIIVSLVAFLVHVFSLGYMNDEGETGLPRYYA 133 Query: 117 FMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIAR-QDKTSINAGMLYFFIAHAGS 175 + +F SM+A + DN + FE++ L S+ L+ + K++ +A F + G Sbjct: 134 SLGLFTFSMLAFVYADNLLMAFMFFELVGLCSYLLIGFWFRTKSAPSAAKKAFLVTRFGD 193 Query: 176 VLIMIAFLLMGRESGSLDFASFRTLSLSP----------------GLASAVFLLAFFGFG 219 +I + + G++ FA + ++ + LL G Sbjct: 194 YFFLIGVVAIASTFGTVAFAGEESFVVAAETAIEDGTTLFGFDAQTWVTITGLLVLGGVI 253 Query: 220 AKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILV 279 K+ PLH+WLP A + ++ + + MV G++ + + + L ++ Sbjct: 254 GKSAQFPLHTWLPDAMEGPTTVSALIHAATMVAAGVYLVAR----MFGYYALSPTALAII 309 Query: 280 MAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLL 339 +G +AL + + DIK++LA+ST+ G ++L +GV G + Sbjct: 310 AFVGGFTALFAATMGVVKDDIKQVLAYSTISQYGYMMLGMGVG--------------GYV 355 Query: 340 GALFHLLNHALFKGLLFLGAGAIISRL-HTHDMEKMGALAKRMPWTAAACLIGCLAISAI 398 +FHL+NHA FK LLFLG+GA+I + H DM KMG L + P T L G LA++ I Sbjct: 356 AGVFHLMNHAFFKALLFLGSGAVIVLMHHEQDMWKMGGLKDKAPVTYYTFLAGALALAGI 415 Query: 399 PPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGA 458 P +GF S+ + E V L A M + +M +TF G Sbjct: 416 VPFSGFWSKDEVLFDALIVGLEEPVILA-----AYAMGLLGVFFTGFYTFRMVFLTFHGE 470 Query: 459 PRSTHAEEAQEVPNTMIVA 477 PRS AE V ++ Sbjct: 471 PRSETAENPHGVGWSIKAP 489 >UniRef50_B6YTX9 Hydrogenase 4, component F or formate hydrogen lyase, subunit 3 n=3 Tax=Thermococcus RepID=B6YTX9_THEON Length = 522 Score = 297 bits (760), Expect = 1e-78, Method: Composition-based stats. Identities = 137/524 (26%), Positives = 250/524 (47%), Gaps = 48/524 (9%) Query: 1 MDALQLLTWSLILYLFA-SLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVT 59 MD + L IL+ FA L S+ + G ++ + I + + + ++ Sbjct: 1 MDIVGLTPVIPILFAFALPLTSIIVRGNRKIIQAYALIGTGLTLLASYELFRQVYNSSKP 60 Query: 60 LVARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMN 119 L+ F + +D +SA LV + L+ + ++YS Y+ EG Sbjct: 61 LIYTFGGWTAPVGIIYEVDRMSALFALVTAALMFLIAIYSYRYLEHEEGLE--WYYTLYL 118 Query: 120 IFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDK-TSINAGMLYFFIAHAGSVLI 178 A ++ +L+ +AF V+ E+ S++++ LV+ +D+ SI AG+ Y FI G+ + Sbjct: 119 GLEAGLLGVLLTGDAFNLFVMIEVTSIAAYALVMFYRDRGDSICAGLKYAFIGALGTTMY 178 Query: 179 MIAFLLMGRESGSLDFASFRTLSLSPGLASA-------------VFLLAFFGFGAKAGMM 225 +A + G+L+ A+ L A LA + F KA ++ Sbjct: 179 FLALGTLYGAFGTLNMANLSALIHGLSFPIAGTTYGNIAIASGVALALATWAFLIKAAIV 238 Query: 226 PLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQ------TGLPLWWGILV 279 P H WLP AHPAAPS SA++SG++V +G++ +++ + G+ +++ Sbjct: 239 PNHFWLPEAHPAAPSPISAILSGLVVNVGVYSLIRFLYTVYGGEVSGSLGGVIHALSVIL 298 Query: 280 MAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLL 339 + +GA+SAL G L A++D+K+L+A+ST+ ++G + +AVGV T + L Sbjct: 299 IVLGAVSALFGALMMNAQRDVKKLIAYSTIMHMGYLAMAVGVG-----------TQLALQ 347 Query: 340 GALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIP 399 A FH++NHA+ K LLFL AGA I + + D+ + L ++MP I L++ IP Sbjct: 348 AAAFHIINHAIAKALLFLAAGAFIHAVGSRDISDLAGLGRQMPVATFGLAIATLSLVGIP 407 Query: 400 PLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAP 459 P N F S+ + + S P ++L ++ +A++ +V+++ + G P Sbjct: 408 PFNVFFSKLLLFNAFMEES-----------PALALVLVLSSVIALVAYVRVFQEIWLGKP 456 Query: 460 RSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIA 503 R +M +L+LA +C+L+ L A ++ ++ A Sbjct: 457 RENTTIREH---GSMSGVLLILAVICLLLGLFAPYIIEHYINPA 497 >UniRef50_B2A693 Proton-translocating NADH-quinone oxidoreductase, chain M n=2 Tax=Clostridia RepID=B2A693_NATTJ Length = 499 Score = 296 bits (759), Expect = 1e-78, Method: Composition-based stats. Identities = 123/515 (23%), Positives = 239/515 (46%), Gaps = 39/515 (7%) Query: 7 LTWSLILYLFASLASLFLLGLDRLA------IKLSGITSLVGGVIGIISGITQLHAGVTL 60 +I+ L S L GL + + LS + ++ I ++ ++ + Sbjct: 5 FHLPIIIVLIGIFVSFILPGLHFIKKNLNEYVSLSAMILMLVIAIYLVIEVSSNGPFTYV 64 Query: 61 VARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGF-FMN 119 V +APP+ + +D L +M L+I+ + + LY+ + + A ++ + Sbjct: 65 VGEWAPPW---GIEFNVDYLGVYMTLIITGIGFLALLYASRDLHHELQENALSLYYPLYM 121 Query: 120 IFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIM 179 + +ASM+ +++ ++ F VL E+ L+S ++ +++K +I A + Y + GS ++ Sbjct: 122 LLMASMIGMVLTNDIFNLFVLLEITLLTSVAIICVKENKDTIEASLKYLMLNALGSATVL 181 Query: 180 IAFLLMGRESGSLDFASFR-----TLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRA 234 + L+ +G L+ P + A+ L F GFG K+ + P+H WLP A Sbjct: 182 MGIALLYIITGHLNMTYIAQELAVNFEQYPTVIMAIVALFFVGFGVKSALFPMHVWLPDA 241 Query: 235 HPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWW-GILVMAIGAISALLGVLY 293 H +APS +SA++SG+++K+ + +++ +L + L L G +++ A +LG ++ Sbjct: 242 HGSAPSPSSAVLSGLVIKVYVVSLIRFYFIVLPEEILELMPVGEILLWFAAAGMILGSMF 301 Query: 294 ALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKG 353 A+A++DIK++LA+S+V + + L +G+ L++ G L H+LNHA+ K Sbjct: 302 AIAQEDIKKMLAYSSVAQISYVFLGIGL-----------LSLTSFQGGLLHILNHAIIKS 350 Query: 354 LLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQS 413 +LFL AGAII + M + R P +G A+ IP NGFIS+WY Sbjct: 351 MLFLIAGAIIYTSGIRKISHMHGVGLRYPLIMICFTLGAFAMIGIPGTNGFISKWYLALG 410 Query: 414 LFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQ--EVP 471 R P ++++ V+ L + ++ + +F G + + ++P Sbjct: 411 ALDAGR----------PFFVLVILVSSLLNGVYYLPIVVNSFFGDMQDADINFIKCNKLP 460 Query: 472 NTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAF 506 M ++L L + I L + + Sbjct: 461 WQMFFPIVLCGFLIIFIGLYPALPLSLVEPAVEFL 495 >UniRef50_Q2C5U2 NADH-plastoquinone oxidoreductase, chain 5 n=2 Tax=Photobacterium RepID=Q2C5U2_9GAMM Length = 626 Score = 296 bits (757), Expect = 3e-78, Method: Composition-based stats. Identities = 142/681 (20%), Positives = 260/681 (38%), Gaps = 76/681 (11%) Query: 8 TWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGV-----TLVA 62 W + S A + L G + SL V +++G+ L + + Sbjct: 5 LWLIPAAPLFSAALIVLFGKHFPTRASGILASLSVLVSAVLTGMLWLSSDFNPAFHQQLW 64 Query: 63 RFAPPFEF-ADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIF 121 + ++ ++ L +D LS M+ V S + + L+S+ +MR G ++N+F Sbjct: 65 TWMAVGDWNVNIGLSVDRLSLVMITVTSWVGFLIHLFSVPFMRR--DFGERRYFCYLNLF 122 Query: 122 IASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKT-SINAGMLYFFIAHAGSVLIMI 180 +A M+ ++ DN +E+M L S+ L+ +K ++ +G F + G L+ I Sbjct: 123 VAGMLFFVMADNLILLYTGWEIMGLCSYGLISHYYNKEKNVYSGRKAFVVTRIGDTLLAI 182 Query: 181 AFLLMGRESGSLDFASFRTL----SLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHP 236 LL +++ T+ S++ L A+ LL FG AK+ P H WLP + Sbjct: 183 GILLAFTVFKTVNLNEIYTIASQQSMNLWLIGAICLLFLFGGMAKSAQFPFHVWLPESMA 242 Query: 237 AAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALA 296 + ++ + + MV G++ I + L WW V +GA +A ALA Sbjct: 243 GPSTVSALIHAATMVTAGVYLIAR-NHVLFNLVPDVTWW---VSLVGAFTAFYAATCALA 298 Query: 297 EQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLF 356 + DIKR+LA+ST+ +G + A+GV L A+FH++ HA FK LLF Sbjct: 299 QNDIKRILAYSTISQIGYMFAALGVGAYDL--------------AIFHVIVHACFKALLF 344 Query: 357 LGAGAIISRL-HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPP-LNGFISEWYTWQSL 414 + +G II H HD+ KMG L KR+PW L G +++A+P F S+ + Sbjct: 345 ISSGVIIDMFNHDHDIRKMGGLGKRLPWLKWTYLAGSASLAALPVITASFFSKDAIIAAT 404 Query: 415 FSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAE----EAQEV 470 + + + +MY + F G R+ +E + + Sbjct: 405 ETGHLGWLLGALGLAGALF---------TSIYSFRMYFMVFNGENRTAFSEPRYLKNNGL 455 Query: 471 PNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVT 530 P M V+ +LA + I + P I GT T Sbjct: 456 PWQMKVSTGILAVGSIAIG----------WMQFPNEWSFGPHLFLPWIDSQLGTAPEIAT 505 Query: 531 PSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVV 590 + L+L ++ + W+ + ++ C Sbjct: 506 SAGLMLQVVGSLVAIAGVWIAYILVKQELKQGHGIANC--------------------QF 545 Query: 591 FSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSG 650 ++ + + T+ ++ +++ I + + + +Q Sbjct: 546 LNSAWYIDDLSKLTIIRGFKGLSALLETVIERWVLNQAIVKGIAAMLSHSGEAVSDVQGS 605 Query: 651 DFRLYCLYVVAALVVLLIAIA 671 Y + ++A V+LL + Sbjct: 606 QLSRYVIMMIAGSVLLLFYLV 626 >UniRef50_A1SE38 Proton-translocating NADH-quinone oxidoreductase, chain L n=5 Tax=Actinomycetales RepID=A1SE38_NOCSJ Length = 643 Score = 296 bits (757), Expect = 3e-78, Method: Composition-based stats. Identities = 148/686 (21%), Positives = 264/686 (38%), Gaps = 93/686 (13%) Query: 7 LTWSLILYLFASLASLFLLGL--DRLAIKLSGITSLVGGVIGIISGITQLHAG------- 57 L W ++ A A L + G D+ L + +V ++ ++ L Sbjct: 23 LLWLVVALPLAGAAILLVGGRYTDKWGHLLGTLLPVVSFILSLVLFFDLLGRDEGDRQFN 82 Query: 58 VTLVARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFF 117 + F + L D LSA +L+I+ + + +YS+ YM + + Sbjct: 83 QHVFTWFQTGHLDVGMDLLYDPLSALFLLLITGVGSLIHVYSIGYMAHDPRR--RRFFGY 140 Query: 118 MNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKT-SINAGMLYFFIAHAGSV 176 +N+F+A+M+ L++ +N + +E + L+S+ L+ Q + + AG F I G + Sbjct: 141 LNLFVAAMLLLVLSENYLGLFLGWEGVGLASYLLIGFWQHRPSAAAAGKKAFVINRVGDM 200 Query: 177 LIMIAFLLMGRESGSLDFASFRTLS--LSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRA 234 + A ++ GS F + S + + LL G AK+ PL +WL A Sbjct: 201 GMSTAIMMFYVTFGSTSFTVISANAPGASDTQLTILGLLLLLGACAKSAQFPLQAWLLDA 260 Query: 235 HPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLY 293 P+ SAL + MV G++ I++ A V+ + IS L G Sbjct: 261 M-EGPTPVSALIHAATMVTAGVYLIVRSNFIFEAAPHAQ----TAVVVVALISILWGAAI 315 Query: 294 ALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKG 353 A+ DIK+ LA ST+ +G ++L G+ G + A+FHLL H FK Sbjct: 316 GCAKDDIKKGLAGSTMSQIGYMMLGAGLGAAGYAF------------AIFHLLTHGFFKA 363 Query: 354 LLFLGAGAIISRLHTH-DMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQ 412 +FLGAG+++ ++ DM GAL K MP T +G LAI P +GF S+ + Sbjct: 364 NMFLGAGSVMHGMNDDVDMRHYGALRKMMPVTFLTFAMGYLAIIGFPGFSGFWSKDKIIE 423 Query: 413 SLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAE-EAQEVP 471 + + + + + + G+ +M +TF G R + E P Sbjct: 424 TALADN-----------WLVGLCAIIGAGVTGFYMTRMMLMTFFGDDRRWEKDVHPHESP 472 Query: 472 NTMIVAMLLLAALCVLIA--LSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQV 529 + M V +++LAAL VL L+ W+ + + G Sbjct: 473 SVMTVPLVVLAALSVLGGLMLAGDWIQDFLAPVVGV-----------------GAHDDPP 515 Query: 530 TPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENA-----MAPSGNGVM 584 P+LL+ ++ + + G+ W R RT + V+ Sbjct: 516 VPALLVTAIIVVVVGAGVALAWMLFGRREIPRTAPQDVSFVTRAAREELYGNQINDGLVV 575 Query: 585 QPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEI 644 P R + L + + + +A A Sbjct: 576 NPGRHLVGGLLTIDKHVIDGTFTGGPVA------------------------LGSFAGVA 611 Query: 645 QHLQSGDFRLYCLYVVAALVVLLIAI 670 + +Q+G R Y L ++ +++++A+ Sbjct: 612 RRVQNGFVRTYALSLLGGALIVVLAL 637 >UniRef50_C2BM70 CPA3 family monovalent cation:proton (H+) antiporter-3 subunit A n=5 Tax=Corynebacterium RepID=C2BM70_9CORY Length = 993 Score = 296 bits (757), Expect = 3e-78, Method: Composition-based stats. Identities = 122/558 (21%), Positives = 224/558 (40%), Gaps = 36/558 (6%) Query: 6 LLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFA 65 +L L + +A L ++ + R A + + G V ++ + V R Sbjct: 1 MLVLLGALIAASVVAPLLIMRMGRPAFGILALVPSAGFVWTLVHFLRGTFTDSGAVERTV 60 Query: 66 PPFEFADLTL--RMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIA 123 A+L+ R+D L A L+I + + +Y Y + A M F Sbjct: 61 EWMPSANLSFSLRLDGLGALFSLIILGMGALVLVYCWGYFDGTR-RRLAMFAAQMVGFAT 119 Query: 124 SMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTS-INAGMLYFFIAHAGSVLIMIAF 182 +M L+ DN V +E+ S+ S+ LV ++ S A + G + +++ Sbjct: 120 AMFGLVAADNFLLMYVFWEITSILSYLLVSYYAERASSRRAAQQALMVTALGGLSMLMGI 179 Query: 183 LLMGRESGSLDFASFRTLS--LSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPS 240 +L+GR++G+ F+ + +L G K+ + P H WLP A AAP+ Sbjct: 180 ILLGRQTGAWTFSDIAAYQHFAQTPFVTVAIVLILAGALTKSAIAPAHFWLPGAM-AAPT 238 Query: 241 HASA-LMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQD 299 SA L S MVK GI+ + ++A + W ++V+++G + LLG AL ++D Sbjct: 239 PVSAYLHSAAMVKAGIYLVARLAPSMYEVAT----WHVVVISLGVFTMLLGGWMALKQRD 294 Query: 300 IKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGA 359 +K +LA+ TV +G I V + + AL H+LFK LF+ Sbjct: 295 LKLVLAYGTVSQLGFITSIAAVG-----------SREAMQAALALTFAHSLFKAALFMVV 343 Query: 360 GAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSR 419 GAI T D+ K+ L ++ P+ +I L+++ +PPL GF+++ ++ Sbjct: 344 GAIDHCSGTRDITKLSGLGRKEPFLFGIAIISGLSMAGVPPLFGFVAKEAVLEATMHEEL 403 Query: 420 VEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFC------GAPRSTHAEEAQEVPNT 473 + + + +V + L + ++ F G + + V Sbjct: 404 LAGMPRNMM----LVAYVLGSILTMAYTLRFLWGAFATKQEVNGTEPAEAVAKMHPVTMG 459 Query: 474 MIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSL 533 + ++ LL AL V++ + P +T S +AL G L Sbjct: 460 LWLSPALLTALTVVLGVFPK---PLSAAFDQHLNSTFGPKEHSELALWHGFSVALGLSML 516 Query: 534 LLLLLLAMPLLPGLYWLW 551 +++ + M + W Sbjct: 517 IIVGGIVMHWQRQVLVKW 534 >UniRef50_A9A3Z6 Proton-translocating NADH-quinone oxidoreductase, chain M n=4 Tax=Thaumarchaeota RepID=A9A3Z6_NITMS Length = 517 Score = 295 bits (756), Expect = 3e-78, Method: Composition-based stats. Identities = 127/533 (23%), Positives = 225/533 (42%), Gaps = 48/533 (9%) Query: 7 LTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAP 66 ++L L+ + + ++ + + + I + +G T+ + Sbjct: 3 YALLQAVFLPLLLSPIAYILGRKVGPTPAMWFTFAILLYTTILVVNAALSG-TVEEHYPW 61 Query: 67 PFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMRE--------------------- 105 +F + +D L++ ++I +L + LYS YM Sbjct: 62 TEQFGEFGFLLDGLASPFAIIIYVLSTILVLYSKPYMIHKFHEQFEEEQKINPSSSGQSS 121 Query: 106 ---------YEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQ 156 Y + +F M+ ++ N F + FE+M + +FLV Sbjct: 122 VVESSALSNYVNAKSGLYFALYLVFAMGMLGTVMSTNLIEFYIFFEVMLIPGFFLVALWG 181 Query: 157 DKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFF 216 D G+++ F HAG+V++++ FL++G GS DFA + + + + Sbjct: 182 DGPRRKIGLMFLFWTHAGAVVLLLGFLMIGLTIGSFDFADIKESEIPQDVVMISAIAIAI 241 Query: 217 GFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWG 276 G G K + H WLP H +AP+ SAL+S M+ IG +G+ ++ ++ L T L Sbjct: 242 GLGVKLAVFMFHVWLPYVHGSAPTPISALLSPAMIGIGAYGVFRLIVEFLPSTFAEL--S 299 Query: 277 ILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVV 336 I G ++ L G AL + D+KRLLA+S++ +G +L +G ++ + Sbjct: 300 IWFHIWGLVTMLYGGAMALMQDDLKRLLAYSSISQMGYLLFGIG-----------SMSAM 348 Query: 337 GLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAIS 396 GL GA + H L KG+LF+ AG II ++ T + K+G LA +MP TA +IG L I Sbjct: 349 GLAGAEMMYITHGLGKGILFMMAGIIIVKVGTRSISKLGGLAGKMPITAVCAVIGALTIM 408 Query: 397 AIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFC 456 +PP +GF+ EW + + E L+ + + V L + + M F Sbjct: 409 GVPPTSGFMGEWILFYGALETAIEEGSTLR---AVTFGLGLVATALTMAYMLWMLKRVFF 465 Query: 457 GAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNT 509 G H E+ +E M M++LA V++ + I+ + Sbjct: 466 GKT-PEHLEKVKEGSWYMTAPMMVLAGFTVVLGIYPDIFLKTILPYMNGVLGI 517 >UniRef50_Q0C1D3 NADH-quinone oxidoreductase, L subunit n=4 Tax=cellular organisms RepID=Q0C1D3_HYPNA Length = 716 Score = 295 bits (755), Expect = 4e-78, Method: Composition-based stats. Identities = 140/651 (21%), Positives = 235/651 (36%), Gaps = 104/651 (15%) Query: 71 ADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLV 130 A+ +R+D+LS M+ VI+ + + LYS YM E K ++++F M+ L+V Sbjct: 103 ANWAIRVDALSIVMMAVITGVSGLVHLYSWGYMSEEPHKS--RFFAYLSLFTFMMLMLVV 160 Query: 131 MDNAFWFIVLFEMMSLSSWFLVIARQDKTSIN-AGMLYFFIAHAGSVLIMIAFLLMGRES 189 DN +E + L+S+ L+ K + N A + F G + + + + Sbjct: 161 ADNFIQLFFGWEGVGLASYLLIGFWYTKKAPNDASIKAFVTNRVGDFGLALGIMAVFFVF 220 Query: 190 GSLDFASFRTLSLSPGLAS--------------------------AVFLLAFFGFGAKAG 223 GS++F + + + + +L F G K+ Sbjct: 221 GSVEFGPVLDAIRTNAIVTPVAFAEAAPAREAVIMFLGQRVYALELIGILLFIGAMGKSA 280 Query: 224 MMPLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAI 282 LH WLP A P+ SAL + MV G++ + + + ++ + Sbjct: 281 QFFLHVWLPDAM-EGPTPVSALIHAATMVTAGVYLVC----LVSPIYEYTFYAAGMIALV 335 Query: 283 GAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGAL 342 GA++AL +A+ DIKR++A+ST +G + A GV A+ Sbjct: 336 GAVTALYAATVGMAQNDIKRVIAYSTCSQLGYMFFAAGVG--------------AYEAAM 381 Query: 343 FHLLNHALFKGLLFLGAGAIISRL-HTHDMEKMGALAKRMPWTAAACLIGCLAIS--AIP 399 FHL HA FK LLFLGAG++I + H DM +MG LAK MP T AA +IG +AI IP Sbjct: 382 FHLFTHAFFKALLFLGAGSVIHGMHHEQDMRRMGGLAKFMPLTYAAMMIGTIAIIGLGIP 441 Query: 400 ----PLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITF 455 +GF S+ +S F+ A + G +A + L ++ +TF Sbjct: 442 HTKLGFSGFFSKDAILESAFA----GGTAQVMFGQMAFWFGLLAAFLTSFYSWRLIYMTF 497 Query: 456 CGA--------------------PRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWL 495 G H E P M++ + LL+ V Sbjct: 498 HGPRVVLEDHGHDHAHADEHAEDDHHGHDHTPHESPMVMLIPLALLSLGAVFAGFY---- 553 Query: 496 APKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSR 555 A+ A + V H L L++ + + +R Sbjct: 554 FYDAFVEANNEAFWAGAIYRATENHVLHDRHNVPEWVLWAPLVVTIAGFALASMTYFFNR 613 Query: 556 RAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVT 615 R PL +FS + + TL Sbjct: 614 GVGARIAASG-------------------GPLHSLFSNKWYFDEIYQATLVRGSAFLGNI 654 Query: 616 ARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVL 666 ++ + D + + A+ + + +G Y ++ A +V Sbjct: 655 -FWKADKKIIDGAGPDGMAALAGIGARRLAKMHTGYLYHYAFVIIGAAIVF 704 >UniRef50_C6A3Z7 Membrane-bound hydrogenase MBH 2, subunit Mbh2H (Hydrogenase subunit) n=2 Tax=Euryarchaeota RepID=C6A3Z7_THESM Length = 517 Score = 295 bits (755), Expect = 4e-78, Method: Composition-based stats. Identities = 124/514 (24%), Positives = 241/514 (46%), Gaps = 28/514 (5%) Query: 3 ALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLV- 61 L + L LF + + + + + V+ ++ + G+ + Sbjct: 2 IEHLPALMVALPLFGAFIAPLFKKHHEGVSIWAIFVTGISVVLSLLLTKEVVTNGIIMYV 61 Query: 62 -----ARFAPPFEFA---DLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAA 113 P +A + +D++ AFM + +L+ + ++YS +++++ G Sbjct: 62 FGADKPTLVLPSGYAVPIRIMFEVDAMGAFMAISATLMSFIGAIYSYSHVKKDTGLEK-- 119 Query: 114 MGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIAR-QDKTSINAGMLYFFIAH 172 + + A ++ +++ + F V E+ ++ LV R + AG+ Y ++ Sbjct: 120 YYALLMLLEAGILGMVLTGDLFNLFVFLEIAGIAGSALVGFRNYRGEASEAGIKYLIVSA 179 Query: 173 AGSVLIMIAFLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLP 232 S++++ A ++ + G+L+ A + L F F K G +P+H W+P Sbjct: 180 VASLMVLFAVSILYGQYGNLNLAYIAKNVSFNMVDMIALGLLFTSFAMKCGAVPMHYWVP 239 Query: 233 RAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLW-WGILVMAIGAISALLGV 291 A+ P+ + + V ++ + +V+ L A + L G ++ +G ++ +GV Sbjct: 240 DAYTEVPAGINPPLL-VATYASLYALFRVSFTLFANVVIDLARVGWIMSILGVLTMFIGV 298 Query: 292 LYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPL--LTVVGLLGALFHLLNHA 349 AL ++D+KRL++ + G +LL VGV + L L + G +FH++N+ Sbjct: 299 TMALIQKDVKRLMSHHAISQTGYMLLGVGVGLTVLHDPSKLAEFGRDAMAGGVFHIINNI 358 Query: 350 LFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWY 409 ++K LL + AGA+ T ++ +MG LA++MP T + ++G AIS +PP NGF S++ Sbjct: 359 IYKSLLLMTAGALFYVTGTRNLNEMGGLARKMPITTISFMVGAAAISGLPPFNGFASKFL 418 Query: 410 TWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQE 469 +++ + L+ P+ V VT L + FVK++ F G P E +E Sbjct: 419 IYETSYRLN-----------PLLTVFAMVTSVLTLASFVKVFASAFLGPPLEKF-ENKRE 466 Query: 470 VPNTMIVAMLLLAALCVLIALSASWLAPKIMHIA 503 VP MIVAML+LAALC+L L + + K+++ A Sbjct: 467 VPKPMIVAMLILAALCILFGLFPNVVLDKLVYPA 500 >UniRef50_C7NIQ7 NADH:ubiquinone oxidoreductase subunit 5 (Chain L)/multisubunit Na+/H+ antiporter, MnhA subunit n=2 Tax=Kytococcus sedentarius DSM 20547 RepID=C7NIQ7_KYTSD Length = 1003 Score = 295 bits (755), Expect = 4e-78, Method: Composition-based stats. Identities = 118/473 (24%), Positives = 206/473 (43%), Gaps = 27/473 (5%) Query: 70 FADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALL 129 +L R+DSLS + +V+ + + +Y + Y + E G + F +M+ L+ Sbjct: 82 GMNLDFRLDSLSWVLAMVVVFIGTLVLIYCVGYFEDDE-PGLGLFAGSLTAFAGAMLGLV 140 Query: 130 VMDNAFWFIVLFEMMSLSSWFLVIAR-QDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRE 188 DN V +E+ S+ S+ L+ R + S +A M I +G + +++ + +G+ Sbjct: 141 TTDNMLVLYVFWEITSVLSFLLIGHRITSRHSRSAAMEALIITASGGLAMLVGIVGLGQA 200 Query: 189 SGSLDFASFRTLSLSPG-LASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASA-LM 246 +GS ++ G L +A +L G K+ M+P H WLP A AAP+ SA L Sbjct: 201 TGSYSISALMAHPPEAGPLVTASVVLLLVGAITKSAMVPFHFWLPGAM-AAPTPVSAYLH 259 Query: 247 SGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAW 306 + MVK GI+ I + A W V+ +G + LLG +L + DIK +LA+ Sbjct: 260 AAAMVKAGIYLIARFA----PAFADLDVWKWTVLLLGGPTMLLGAWRSLRQVDIKLVLAY 315 Query: 307 STVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRL 366 TV +G ++L VG T L L L+ HALFKG LFL GAI Sbjct: 316 GTVSQLGFLVLVVGHG-----------TQDAALAGLTLLVAHALFKGSLFLVVGAIDHCT 364 Query: 367 HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQ 426 T D+ ++ LA+ MP A + +++ +PPL GF+S+ + +++ Sbjct: 365 GTRDLRRLSGLARSMPVLFATACVSAASMAGVPPLLGFVSK----EGAYTVFNPVEHGWF 420 Query: 427 LAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCV 486 + V + V + + F R+ E + + + LLA + Sbjct: 421 TVEGVTFVFILVGSMMTFAYSARFLWGAF-RTQRTKPLTEVHDPGFFLQFSPALLAVCTI 479 Query: 487 LIALSASWLAPKIMHIAHAFTNTPPATVASGIA--LVPGTFHTQVTPSLLLLL 537 ++ L++ + + + + G+ P T +T ++ +LL Sbjct: 480 VLGLTSKTVLEPWLGNYSGWWAASEHPLHLGLWHGWTPVLAFTALTFAVGVLL 532 >UniRef50_D1A433 Proton-translocating NADH-quinone oxidoreductase, chain L n=2 Tax=Streptosporangineae RepID=D1A433_THECD Length = 698 Score = 295 bits (755), Expect = 5e-78, Method: Composition-based stats. Identities = 125/468 (26%), Positives = 212/468 (45%), Gaps = 33/468 (7%) Query: 34 LSGITSLVGGVIGIISGITQL-HAGVTLVARFAPPFEFADL--TLRMDSLSAFMVLVISL 90 ++ + V V+ +I + H GV P D+ LR+D L+A + L++ Sbjct: 122 IACLPMAVATVLALIVAVAVWRHPGVRTGTLTLIPTGTIDIALGLRVDGLAALVALMVCG 181 Query: 91 LVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWF 150 + + LYS+ YM E + ++ F+++F A+M+ ++ + V +E+M + S+F Sbjct: 182 VALAVQLYSVAYMAE--DRRYSSYAAFISLFTAAMLLVVYSGDLLVLYVGWEVMGVCSYF 239 Query: 151 LVIA-RQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASF--RTLSLSPGLA 207 L+ Q++ + A + F I G V +I ++G +G+ R L G Sbjct: 240 LIGHHWQERANSRAAVKAFLITRLGDVGFLIGIFVLGVGAGTFSIGGVLERLPDLPQGTV 299 Query: 208 SAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLL 266 +A LL G K+ PLH+WLP A A P+ SAL + MV GI+ + + L Sbjct: 300 TAATLLLLAGVAGKSAQFPLHTWLPDAM-AGPTPVSALIHAATMVAAGIYVVAR----LY 354 Query: 267 AQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGL 326 A ++ + IS L L ALA+ D+KR+LA+ST+ + + + V Sbjct: 355 AAFAASAAALTVLGVLAVISMLGSALAALAQDDLKRVLAYSTISQLACMAAGLAVG---- 410 Query: 327 SLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAA 386 + A+FHL+ H FK LLFL AG++I + + + G L + MP T Sbjct: 411 ----------APVAAIFHLVAHGAFKALLFLAAGSVIFVTGSGLLRRHGGLRRAMPVTFW 460 Query: 387 ACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVM---LAVTGGLA 443 A IG A+ +PP++GF S+ + + + L G +A ++ L T + Sbjct: 461 AMTIGYAALVGLPPVSGFFSKDAIVGAAWHAAAHGERPAHLPGGVAWLICLALLATVAVT 520 Query: 444 VMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALS 491 + + +TF G PR+ A+E P M + LA L+ Sbjct: 521 AAYATRAWLMTFFGEPRAAFP--AREAPPLMTWPVAALAVPAALLGFF 566 >UniRef50_B0VE74 pH adaptation potassium efflux system transmembrane protein n=22 Tax=cellular organisms RepID=B0VE74_ACIBY Length = 949 Score = 295 bits (755), Expect = 5e-78, Method: Composition-based stats. Identities = 124/544 (22%), Positives = 237/544 (43%), Gaps = 32/544 (5%) Query: 1 MDALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTL 60 MD L L+ + + L R L I + +++ + G ++ Sbjct: 1 MDTSVLPIIILLPLILGTTLVSLLQRFSRGVTALGAIGVSLTSFGLLLTQAKTVLGGASI 60 Query: 61 VARFAP-PFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMN 119 + P +L+ R+D+L L+I+ + + + Y + + + Sbjct: 61 QQSWDWLPQLGINLSFRLDALGLLFSLLITGIGTLIYI--YAYYYLGPKNSLSKLYLLLM 118 Query: 120 IFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIAR-QDKTSINAGMLYFFIAHAGSVLI 178 +F+A+M+ + + +N +V +E+ S+SS+ LV + + + I G + + Sbjct: 119 LFMAAMLGISLSNNLIILLVFWELTSISSFLLVGYWSHYEAAQRGSRMALTITGMGGLAM 178 Query: 179 MIAFLLMGRESGSL---DFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAH 235 + F+L+G+ +G+ D + L S L LL G K+ P H WLP A Sbjct: 179 LGGFVLLGQITGTYEINDIVGMKDLIQSHYLFVPTLLLILLGAFTKSAQFPFHFWLPNAM 238 Query: 236 PAAPSHASA-LMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYA 294 AAP+ SA L S MVK GIF + ++A + + +V +G + + +A Sbjct: 239 -AAPTPVSAYLHSATMVKAGIFLLARLAPIFIGAA----LYHNIVTFVGLFTLCMAACFA 293 Query: 295 LAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGL 354 + ++D+K LLA+ST+ ++G+I+ +G+ + + + A+FH++NHA FK Sbjct: 294 IFKEDLKGLLAYSTISHLGLIVCLLGIG-----------SPLAVAAAIFHIINHATFKAA 342 Query: 355 LFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSL 414 LF+ AG I T D+ K+ + + +P+TA +I +++ +P NGFIS+ + L Sbjct: 343 LFMIAGIIDHETGTRDLRKLSGIWQLLPFTATLTMITAASMAGVPLTNGFISKEMFFTEL 402 Query: 415 FSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHA--EEAQEVPN 472 A A ++ + G AV +++ F P + A E P Sbjct: 403 L------ASLSGSTVIFASIIATLAGIFAVSYSIRLVHGVFFDGPVGKQVPNKNAHEPPI 456 Query: 473 TMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPS 532 M +LLA LC+L+ + + L +++ + P + +A+ G + Sbjct: 457 GMRAPAILLATLCILVGIFPALLVEPLVNSVTRASLMQPDFAGTHLAIWHGFNAPLIMSI 516 Query: 533 LLLL 536 + L+ Sbjct: 517 IALV 520 >UniRef50_Q85FH9 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic n=8 Tax=Euphyllophyta RepID=NU5C_ADICA Length = 729 Score = 294 bits (754), Expect = 5e-78, Method: Composition-based stats. Identities = 122/474 (25%), Positives = 203/474 (42%), Gaps = 58/474 (12%) Query: 10 SLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGV------TLVAR 63 LI S F + R +L + ++ I + + + Sbjct: 15 PLIASCCTGSLSFFFPRVARGFHRLCALLNVFSLAISMFVSLAIFQEQFVKNPIQQYLWI 74 Query: 64 FAPPFEF-ADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFI 122 + P F ++ +DSL+ M L+++ + V+ +YS +YM +G ++++F Sbjct: 75 WIPRSTFCVEIGFLVDSLTLVMSLLVTTVGVLVMIYSDSYM--CYDRGYTRFYAYLSLFT 132 Query: 123 ASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDK-TSINAGMLYFFIAHAGSVLIMIA 181 ASM+ L++ N V +E++ + S+ LV + ++ NA F G +++ Sbjct: 133 ASMLGLVLSPNLIQLYVFWELVGMCSYLLVGFWFARSSAANACQKAFVTNRIGDFGLLLG 192 Query: 182 FLLMGRESGSLDFASF--------RTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPR 233 L + +GS + + +P L + + L G AK+ PLH WLP Sbjct: 193 ILGIYWTTGSFEISELCDRFAKLKEIGFSNPILTNIIAFLLLAGPVAKSAQFPLHVWLPD 252 Query: 234 AHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVL 292 A P+ SAL + MV GIF I ++ + + L A ALLG Sbjct: 253 AM-EGPTPISALIHAATMVAAGIFFIARIYGLISTLPLVMQASSWLGGAT----ALLGAT 307 Query: 293 YALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFK 352 ALA++D+K+ LA+ST+ +G ++LA+G+ ALFHL+ HA K Sbjct: 308 LALAQRDLKKGLAYSTMSQLGYMVLALGIG--------------AYQSALFHLVTHAYSK 353 Query: 353 GLLFLGAGAIISRL---------HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNG 403 LLFLGAG++I + + +M MG L K MP T L+G L++S IPPL Sbjct: 354 ALLFLGAGSVIHSIEKVVGYSPNRSQNMFFMGGLRKYMPITGTTFLLGTLSLSGIPPLAC 413 Query: 404 FISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCG 457 F S+ + S ++ + T GL ++Y +TF G Sbjct: 414 FWSKDEIIHESWLSSLPLG-----------ILASGTAGLTAFYMFRIYLLTFEG 456 >UniRef50_A8A9X6 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Ignicoccus hospitalis KIN4/I RepID=A8A9X6_IGNH4 Length = 692 Score = 293 bits (750), Expect = 2e-77, Method: Composition-based stats. Identities = 130/666 (19%), Positives = 258/666 (38%), Gaps = 61/666 (9%) Query: 31 AIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAPPFEFADLTLRMDSLSAFMVLVISL 90 ++ ++ +V +++ + + + P D +L +D++S M +V++ Sbjct: 57 SLAVATAGVVVLATAYLLAEGYGKSYEIKYYSWYPLPSHPNDFSLLIDTISGIMAIVVAT 116 Query: 91 LVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWF 150 + + +YS YM +G M +F+ASM +++ N ++ +E++ +S+ Sbjct: 117 ITFLDLVYSWEYMAG--ARGPNRYYSEMMLFLASMEGIVLSGNLVLIMLFWELVGAASFL 174 Query: 151 LVIARQ-----DKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRTLS---- 201 L+ ++ AG + + + + +G+ + + Sbjct: 175 LISYYWYDPIIGPNAVRAGRKAILVTRVADLFFLAGLGALIALAGTGNVLELQHYETLAF 234 Query: 202 ---LSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGI 258 L +A+ + G K+ +P WL A + ++ L S MV G + I Sbjct: 235 QKWLGAAALTAILVGITIGAFGKSAQVPFWPWLSDAMEGPTTVSAVLHSATMVAAGAYLI 294 Query: 259 LKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLA 318 ++ L + +GA++AL+ L+ A +DIK+++A+ST+ +G + A Sbjct: 295 ARLFPLYEEFIAFNLALMDFIAIVGAVTALVAGLFGAAARDIKKVIAFSTMSQLGYMFAA 354 Query: 319 VGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISR--------LHTHD 370 +G+ L+ HL HA FK LLFLGAGA+I D Sbjct: 355 LGLG--------------SLVAGAAHLYIHAFFKALLFLGAGAVIHSLEHVLHHPYKARD 400 Query: 371 MEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGP 430 M MG L + M T LI L++ +PP +G+ S+ +S A+A+ Sbjct: 401 MFNMGGLWRYMKVTFVVTLIALLSLIGLPPFSGWWSKELIIESALHSPVPHALAVG---- 456 Query: 431 IAMVMLAVTGGLAVMCFVKMYGITFCGAPR-STHAEEAQEVPNTMIVAMLLLAALCVLIA 489 V L + GL ++ +TF G PR H E + M A++ LA + ++ Sbjct: 457 ---VTLTLAAGLTGFYSGRLLYLTFFGKPRWKAHGEHLHDAGPAMKFALVTLALIVLVSG 513 Query: 490 LSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYW 549 + ++ K + + + L F T +T +L+ + ++ +++ Sbjct: 514 PTITFALKKALRAHEGLPRYELPLGNAALTLAIIGFLTPITYYVLMGVAERGGIIRKVWY 573 Query: 550 LWCRS--RRAAFRRTGDAWA-CGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLR 606 + F + WA +A+ + + + + + L Sbjct: 574 PLYKEFWFHEFFHSVANFWAYALSKAVDAVERAYTAFLVGMAFFIGRAYAWGWAVSVRLA 633 Query: 607 LNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVL 666 E +WD +VI + + +L K+ LQ+GD LY A L +L Sbjct: 634 D--------------EDYWDVKVIDGLARSVVKLGKKALELQNGDINLYVALSAAGLTLL 679 Query: 667 LIAIAV 672 + + Sbjct: 680 MFVTLI 685 >UniRef50_B6YTY8 Membrane bound hydrogenase, MbhH subunit n=9 Tax=Thermococcaceae RepID=B6YTY8_THEON Length = 532 Score = 292 bits (749), Expect = 2e-77, Method: Composition-based stats. Identities = 140/529 (26%), Positives = 246/529 (46%), Gaps = 43/529 (8%) Query: 1 MDALQLLTWSLILYLFASLASLFLLGLDRLA-IKLSGITSLVGGVIGIISGITQLHAGVT 59 M+ +L + +I+ LF + A + + A + + S + ++ + + G Sbjct: 1 MNGEAILPYLIIIPLFGAFAMPIVNLAGKKAREAWAVLISALTFIVSSVIFYHIWNTGEI 60 Query: 60 LVARFAPPFEFA-------DLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAA 112 +V F + +D A MV +++ + ++ +YS+ YM+ G Sbjct: 61 IVYTLGAETPFGQGVDFPIRIVWEVDLFGAIMVFIVAFVSLMAVIYSIGYMKHDTGLDK- 119 Query: 113 AMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDK-TSINAGMLYFFIA 171 + I M+ + + + F F V E+MS++S+ LV R D I AG+ Y F+ Sbjct: 120 -YYTLILILELGMLGIAITGDLFNFYVFLEIMSIASYALVAFRNDTWEGIEAGIKYMFVG 178 Query: 172 HAGSVLIMIAFLLMGRESGSLDFASFRTLSLSPGLASA--VFLLAFFGFGAKAGMMPLHS 229 S +++ L+ + G+L + +A L G K+G P+H Sbjct: 179 SIASAFVLLGIALLYGQYGTLTMGYLAVKIVQNPTVTAKVALALFIAGLLFKSGASPVHM 238 Query: 230 WLPRAHPAAPSHASALMSGVMVKIG-IFGILKVAMDLLAQTGLPL-------------WW 275 WL AHPAAPS SA++SG+++KIG I+ I ++ + + Sbjct: 239 WLADAHPAAPSSISAMLSGLVIKIGGIYAIARILFSIYTPMAHSIVLEAYLQPHINMSAI 298 Query: 276 GILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTV 335 G +++ ++ ++G A+ + D+KRLLA+S+V +G ILL +G+++ Sbjct: 299 GWIIIIFACLTLIIGNAMAVIQTDMKRLLAYSSVGQIGYILLGLGISIAAYGTQT---GE 355 Query: 336 VGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAI 395 + L GA++H +NHAL K LLFL AG +I +L T ++ ++ LAK MP T A LIG AI Sbjct: 356 IALAGAIYHTVNHALMKALLFLVAGVVIHQLGTRNLNELSGLAKTMPKTTFAFLIGAAAI 415 Query: 396 SAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITF 455 +PPLNGF S+W ++S + PI + + +V++ TF Sbjct: 416 VGMPPLNGFASKWLIYESS-----------AIFNPILGAIAIIGTAFCTAAYVRVLY-TF 463 Query: 456 CGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAH 504 G P S A++ +M++ MLLL +++ L ++ K+M A Sbjct: 464 FGRP-SEKVMAAKDPETSMMLPMLLLVLAIIIMGLLPWQISDKVMIPAA 511 >UniRef50_C2KMP0 NADH dehydrogenase (Quinone) n=2 Tax=Mobiluncus mulieris RepID=C2KMP0_9ACTO Length = 710 Score = 292 bits (748), Expect = 3e-77, Method: Composition-based stats. Identities = 144/693 (20%), Positives = 275/693 (39%), Gaps = 79/693 (11%) Query: 7 LTWSLILYLFASLASLFL-LGLDRLAIKLSGITSLV------GGVIGIISGITQLHAGVT 59 + + L ++L L +D LS + S V G ++ ++ + A Sbjct: 67 AGLMIAIPLVSALFLLVAGRRVDAWGHWLSVLASWVAFGIGGGVLVEMLGRAPEARAQAV 126 Query: 60 LVARFAPPFEF-ADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFM 118 + ++ P E + L +D LS V++++ + + +YS+ YM + ++ Sbjct: 127 TLWQWLPGTELQVNFGLLLDPLSISFVMLVTFVGSLIHVYSVGYMEHDPDR--RRFFAYL 184 Query: 119 NIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQD-KTSINAGMLYFFIAHAGSVL 177 N+F+A+M+ L++ ++ + +E + L+S+ L+ + A F + G + Sbjct: 185 NLFVAAMLTLVLGNSYLVLFMGWEGVGLASYLLIGFWNQVHNNALAAKKAFVMNRVGDLG 244 Query: 178 IMIAFLLMGRESGSLDFASFRTLSLSP----GLASAVFLLAFFGFGAKAGMMPLHSWLPR 233 ++IA + M G++DFA+ A+ + + K+ PL +WL Sbjct: 245 LLIAMMAMFARFGAVDFATVLGEPAGNSGGIPWATFIGMFLLLAACGKSAQFPLQAWLGD 304 Query: 234 AHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVL 292 A A P+ SAL + MV G++ +++ + + V IGAI+ + G + Sbjct: 305 AM-AGPTPVSALIHAATMVTAGVYLMVRSGAIYVQTPVA----ALAVAIIGAITLVFGAV 359 Query: 293 YALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFK 352 A+ D+K++LA ST+ +G ++L G+ VG A+FHL+ H FK Sbjct: 360 VGCAKDDMKKVLAASTMSQIGYMMLGAGLG------------PVGWAFAIFHLVMHGFFK 407 Query: 353 GLLFLGAGAIISRLHTH-DMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTW 411 LFL AG ++ + +M + G L + M T A L+G LAI IPP +GF S+ Sbjct: 408 AQLFLAAGCVMHAMSDQVNMRRFGGLRRVMKITWFAFLVGWLAILGIPPFSGFFSKDKII 467 Query: 412 QSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPR-----STHAEE 466 ++ F + + + V G+ +++ + F G+PR Sbjct: 468 EAAFLPNPHYGEWYP---WVFGLTALVGAGITAFYMSRLFFLIFHGSPRWTTELEGAPVH 524 Query: 467 AQEVPNTMIVAMLLLAALCVLIA-------LSASWLAPKIMHIAHAFTNTPPATVASGIA 519 E M V +L+L+ + + WL P + A + G + Sbjct: 525 PHEANAWMTVPLLVLSVFSIAAGGVLSVGNVFVQWLDPVLSVSAASL----------GAS 574 Query: 520 LVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPS 579 V P ++LL+L ++ G + R R A + Sbjct: 575 GEHAAHPEPVLPEMVLLVLTLTVVVIGALLAYVLFLRREVSRAIPA-------------A 621 Query: 580 GNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQR 639 G V ++ + + + P + L +G+ T+ + ++ TQ Sbjct: 622 GAIVSAARNDLYQDVVNEKVVIVPVMTLARGVE-------VTDSRVVDGLVEATGWLTQW 674 Query: 640 LAKEIQHLQSGDFRLYCLYVVAALVVLLIAIAV 672 L + + +G R Y + +A V L + V Sbjct: 675 LGRIGSAVHTGAPRRYAAWTLAGTVAALCLVLV 707 >UniRef50_D0XMF8 NADH dehydrogenase (Quinone) n=3 Tax=Alphaproteobacteria RepID=D0XMF8_9CAUL Length = 992 Score = 292 bits (747), Expect = 4e-77, Method: Composition-based stats. Identities = 124/534 (23%), Positives = 226/534 (42%), Gaps = 33/534 (6%) Query: 16 FASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFA-PPFEFADLT 74 +LA + R A L+ + ++ + S + AG + AR P +L Sbjct: 48 IGALAPALAIRRGRNASALAAGAVTLAALVILGSFAPAVLAGEVVQARIDWIPLLGLNLN 107 Query: 75 LRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNA 134 L +D+L +I + ++ +Y+ Y+ + + G ++ +F +M +++ DN Sbjct: 108 LFLDALGLMFAGMILGIGLLVIVYARFYLAKADPMG--RFFVYLLLFQGAMTGIVLSDNV 165 Query: 135 FWFIVLFEMMSLSSWFLVIARQD-KTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLD 193 ++ +E+ SLSS+ L+ + + + AG + ++ L++G +GS D Sbjct: 166 LLLLIFWELTSLSSFLLIGFWRHLPEGRQGARMALAVTGAGGLSLIGGLLILGNIAGSYD 225 Query: 194 FASF---RTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASA-LMSGV 249 R + L LL G K+ P H WLP A AAP+ SA L S Sbjct: 226 LTVILQNREAIQASPLYLPALLLILGGCFTKSAQFPFHFWLPHAM-AAPTPVSAYLHSAT 284 Query: 250 MVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTV 309 MVK GIF + ++ L W LV G ++ + + AL + D+K LLA+ST+ Sbjct: 285 MVKAGIFMLARLWPVLSGTGE----WFYLVATTGLVTMVFAAVVALFKDDLKGLLAYSTI 340 Query: 310 ENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTH 369 ++G + + G T + + +FH+LNHA FK LF+ AG + T Sbjct: 341 SHLGFLTMLFGFG-----------TPMAAVVGVFHILNHATFKAALFMNAGIVDHEAGTR 389 Query: 370 DMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAG 429 D++++G LA MP A ++ L+++ IPPLNGFIS+ + Sbjct: 390 DIKRLGGLATLMPIAATLAVVAGLSMAGIPPLNGFISKEMMLE------EASHTVWWSQP 443 Query: 430 PIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIA 489 + + + +V + + G R+ + + + + +L L V I Sbjct: 444 WLVPALATLGATFSVAYSFRYIVHVYFGTTRTDYPKTPHDPGIGLWGPPAVLVGLVVAIG 503 Query: 490 LSASWLAPKIMHI---AHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLA 540 L + +A ++ A TP +++ + P F + + ++L A Sbjct: 504 LFPAVVAGPLVEAVSRAVIGGETPYYSLSLWHGVTPALFMSLAAIGIGAVILGA 557 >UniRef50_Q2S1W7 NADH dehydrogenase, putative n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S1W7_SALRD Length = 794 Score = 291 bits (746), Expect = 5e-77, Method: Composition-based stats. Identities = 122/533 (22%), Positives = 224/533 (42%), Gaps = 41/533 (7%) Query: 39 SLVGGVIGIISGITQLHAGVTLVARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLY 98 + + G + + G + + + P + +L+ +D LS F L+I+ + + +Y Sbjct: 37 AAITGTLATLVGRVAAGETLRVSYTWVPGLD-VNLSFYVDGLSLFFALLITGIGTLIYVY 95 Query: 99 SLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDK 158 + Y++ + G ++++F+A+MV L++ DN F + FE+ S +S+ L+ D+ Sbjct: 96 AGGYLKGHHHLG--RFFSYLSMFMAAMVGLVLADNLITFYIFFELTSFASFVLIGFNHDE 153 Query: 159 -TSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASF---RTLSLSPGLASAVFLLA 214 S A + AG + +++ F+LM + +G+ ++ + + LL Sbjct: 154 APSRRAAWQALLVTKAGGLALLVGFILMQQATGTFQISAILESGDVIRQHSFYLPIVLLV 213 Query: 215 FFGFGAKAGMMPLHSWLPRAHPAAPSHASA-LMSGVMVKIGIFGILKVAMDLLAQTGLPL 273 G K+ P + WLP A AP+ SA L S MVK GI+ + + L Sbjct: 214 LAGAFTKSAQFPFYFWLPNAM-EAPTPVSAYLHSATMVKAGIYVMARFHPVLSGTD---- 268 Query: 274 WWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLL 333 W +V IGA++ +L AL D+K +LA++T+ +A+ L++ L Sbjct: 269 LWMWIVGGIGALTMVLSAWLALQYTDMKAILAYTTI-----------MALGLLTMLLGLG 317 Query: 334 TVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCL 393 T V + + +L HA +K LF+ AGAI +H D+ K+ L RMP T AA ++ L Sbjct: 318 TEVAVEACMVFILVHAFYKAALFMVAGAIDHEVHVRDITKLRGLWNRMPVTGAAAVLAAL 377 Query: 394 AISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGI 453 +++ IPP GF+ + +++ + + ++A G L + F Sbjct: 378 SMAGIPPFFGFVGKELIYKAATHFDPAAVAVTVASVLANVALVASAGLLVIRPFS----- 432 Query: 454 TFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPAT 513 + E A + ++LA V + L+ L + P A Sbjct: 433 ----GEVNDVTEHAHRPAAGLWFGPVVLAVFSVGLGLAPWLLDAAFLG--------PSAG 480 Query: 514 VASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAW 566 G ++ P L L + + G Y W R + + W Sbjct: 481 AVLGASIAPHLALWHGFTLELGLSAVTVAAGVGTYLAWTGLRTNVAFQQFERW 533 >UniRef50_A5GD02 Proton-translocating NADH-quinone oxidoreductase, chain L n=7 Tax=Geobacter RepID=A5GD02_GEOUR Length = 666 Score = 291 bits (746), Expect = 5e-77, Method: Composition-based stats. Identities = 119/503 (23%), Positives = 209/503 (41%), Gaps = 67/503 (13%) Query: 28 DRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAPPFEF-ADLTLRMDSLSAFMVL 86 R+A L+ V V + + + + + F+F A +TL +D LS MVL Sbjct: 28 RRIAETLACGVVWVSFVCSLSAFVAYRAPLKVELGSWLAAFDFKAPITLYLDPLSLVMVL 87 Query: 87 VISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSL 146 +I+ + + +Y++ YM + A +N+F+ +M+ L++ +N + +E + Sbjct: 88 MITFVCGLIHVYAVGYMADDPD--YARFFALLNLFVFAMLVLVLAENLPLLYLGWEGVGF 145 Query: 147 SSWFLVIAR-QDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRTLS--LS 203 S+ L+ +++ + AG F + G IA + M + ++ L + Sbjct: 146 CSYALIGFWYREEKNATAGRKAFIVTRIGDTAFGIAVVWMFQLFSTVSITELNGLGFLMP 205 Query: 204 PGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASA-LMSGVMVKIGIFGILKVA 262 G+ +A+ LL G K+ +PL WLP A A P+ SA + + MV G++ + + Sbjct: 206 AGVITALGLLLLIGAMGKSAQLPLMVWLPDAM-AGPTPVSAQIHAATMVTAGVYLLAR-- 262 Query: 263 MDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVA 322 + G + G ++A ALA++D+KR+LA+ST+ +G ++L VG Sbjct: 263 --MFPLIGASATVQGAIALTGGLTAFYAASCALAQRDLKRVLAYSTISQIGYMMLGVGCG 320 Query: 323 MVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLH-THDMEKMGALAKRM 381 + A FHLL HA FK LLFL AG +I+ LH D+ +MG L + + Sbjct: 321 --------------AITAATFHLLVHAFFKALLFLAAGCVITALHHEQDIFRMGGLRRNL 366 Query: 382 PWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGG 441 P T L G + ++ +P GF S+ + + + L L G T Sbjct: 367 PLTFWPFLAGAVCLAGLPLTGGFFSKDAILTAAWGKGGLLYGGLYLLGLF-------TAL 419 Query: 442 LAVMCFVKMYGITF---------------------------------CGAPRSTHAEEAQ 468 L + +M + F G+P S + Sbjct: 420 LTSVYTFRMVYLVFGGTQQIPPFEKGGLGWISTAGHGQIPLSPLGPPFGSPLSKGEAQHL 479 Query: 469 EVPNTMIVAMLLLAALCVLIALS 491 VP M ++ LA L + + Sbjct: 480 HVPRLMEWTLIPLALLGLFGGII 502 >UniRef50_C4K6N0 NADH dehydrogenase I chain L, membrane subunit n=37 Tax=Gammaproteobacteria RepID=C4K6N0_HAMD5 Length = 633 Score = 291 bits (746), Expect = 5e-77, Method: Composition-based stats. Identities = 133/493 (26%), Positives = 208/493 (42%), Gaps = 48/493 (9%) Query: 59 TLVARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMR---------EYEGK 109 TL + + +TL +D LS M+ V+ + + LY+ YMR E Sbjct: 71 TLWQWISTDYFHIPITLMLDGLSLTMLSVVIGVGFLIHLYASWYMRAKHSSHDEKEQAKV 130 Query: 110 GAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTS-INAGMLYF 168 G A + N+FIASMV L++ DN + +E + L S+ L+ + A M F Sbjct: 131 GYARFFAYTNLFIASMVVLVLADNLLLMYLGWEGVGLCSYLLIGFYYTHPANGAAAMKAF 190 Query: 169 FIAHAGSVLIMIAFLLMGRESGSLDFASFR-----TLSLSPGLASAVFLLAFFGFGAKAG 223 I G V + + ++ ++ G+L+ L++ + L+ G K+ Sbjct: 191 VITRIGDVFLALGLFILYQQLGTLNIRELMILAPTHLAVGSDAITWATLMLLGGAVGKSA 250 Query: 224 MMPLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAI 282 +PL +WL A A P+ SAL + MV G++ I + L + W G I Sbjct: 251 QLPLQTWLADAM-AGPTPVSALIHAATMVTAGVYLIARTHGLFLMAPEILHWAG----II 305 Query: 283 GAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGAL 342 GAI+ LL AL + DIKR+LA+ST+ +G + LA+GV A+ Sbjct: 306 GAITLLLAGFAALVQTDIKRILAYSTMSQIGYMFLALGV--------------QAWDAAI 351 Query: 343 FHLLNHALFKGLLFLGAGAIISRLH-THDMEKMGALAKRMPWTAAACLIGCLAISAIPP- 400 FHL+ HA FK LLFL AG++I H ++ MG L K +P+ L+G A++A+P Sbjct: 352 FHLMTHAFFKALLFLSAGSVILACHYEQNIFNMGGLRKPLPFLYLCFLVGGSALAALPVI 411 Query: 401 LNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPR 460 GF S+ + + +E M+ V L + +M I F GAP Sbjct: 412 TAGFYSKDEILWGAWLHNNIE----------LMIAGLVGAFLTAVYTFRMILIVFHGAPP 461 Query: 461 STHAEEAQEVPNTMIVAMLLLAALCVLIA-LSASWLAPKIMHIAHAFTNTPPATVASGIA 519 +A + V + +L L I L LA + T SG+ Sbjct: 462 EHPPYKAAPREISHHVPLWVLLILSTFIGALIMPPLAGVLPENHALETGKTILAFCSGLI 521 Query: 520 LVPGTFHTQVTPS 532 ++ G S Sbjct: 522 VITGILLASFLYS 534 >UniRef50_C0WGQ4 CPA3 family monovalent cation:proton (H+) antiporter-3 subunit A n=2 Tax=Corynebacterium RepID=C0WGQ4_9CORY Length = 1002 Score = 291 bits (744), Expect = 7e-77, Method: Composition-based stats. Identities = 126/508 (24%), Positives = 215/508 (42%), Gaps = 36/508 (7%) Query: 6 LLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIIS---GITQLHAGVTLVA 62 +L L + +A L ++ + R A L I VG V + G + + Sbjct: 1 MLILLGALIVATVVAPLLIMNVGRPAFGLLAIVPGVGFVWTLAHFARGTFRDGGTLNYTI 60 Query: 63 RFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFI 122 + P A + LRMD+L L+I + + LY Y + + A M F Sbjct: 61 EWMPAAHLA-VDLRMDALGGLFSLIILGMGALVLLYCWGYF-DSTRRRLAMFAGQMVGFA 118 Query: 123 ASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTS-INAGMLYFFIAHAGSVLIMIA 181 +M L+ D+ V +E+ SL S+ LV ++ S A + G + +++ Sbjct: 119 TAMFGLVTSDSLLLMYVFWEITSLLSYLLVSYYAERASSRRAAQQALMVTVLGGLSMLMG 178 Query: 182 FLLMGRESGSLDFASFRTLSLSP--GLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAP 239 L+GR++G+ F+ P + +L G K+ ++P H WLP A AAP Sbjct: 179 ICLLGRQTGAWTFSEIHAYDHFPQTPYVTVAIVLILVGALTKSAIVPAHFWLPGAM-AAP 237 Query: 240 SHASA-LMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQ 298 + SA L S MVK GI+ + ++A D+ W ++V+++G + LLG AL ++ Sbjct: 238 TPVSAYLHSAAMVKAGIYLVARLAPDMYEVAT----WHLVVISLGVFTMLLGGWMALKQK 293 Query: 299 DIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLG 358 D+K +LA+ TV +G I V V + + L H+LFK LF+ Sbjct: 294 DLKLILAYGTVSQLGFITSIVAVG-----------SREAMQAGLALTFAHSLFKAALFMV 342 Query: 359 AGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLS 418 GAI T D+ K+ L +R P+ + LI L+++ +PPL GF+S+ +S Sbjct: 343 VGAIDHCSGTRDITKLSGLGRRQPFLYSLALISALSMAGVPPLFGFVSKEAVLESTMH-- 400 Query: 419 RVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTM---- 474 E + + + + +V L + ++ F + TM Sbjct: 401 --EGLLIGMPRNMILVAYVAGSILTMAYALRFLWGAFASKNLPHDKDGVSAAVATMHKVN 458 Query: 475 ---IVAMLLLAALCVLIALSASWLAPKI 499 +A +L AL + + L+ L+ I Sbjct: 459 VGLWLAPAVLTALTIALGLAPQALSAAI 486 >UniRef50_A4GYW4 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic n=5090 Tax=Embryophyta RepID=NU5C_POPTR Length = 760 Score = 291 bits (744), Expect = 9e-77, Method: Composition-based stats. Identities = 120/476 (25%), Positives = 206/476 (43%), Gaps = 60/476 (12%) Query: 10 SLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQL------HAGVTLVAR 63 +L + + + L + ++ S++ I ++ I + V Sbjct: 15 TLPVPMLIGMGLLLFPVSTKKLHRIWAFPSVLLLSIVMVFSIDLFIQQINSSSIYQYVWS 74 Query: 64 FAPPFEFA-DLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFI 122 + +F+ + +D L++ ++++I+ + ++ +YS +YM +G +M+ F Sbjct: 75 WTINNDFSLEFGYLIDPLTSILLILITTVGILVLVYSDSYMSHDQG--YLRFFVYMSFFN 132 Query: 123 ASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSI-NAGMLYFFIAHAGSVLIMIA 181 SM+ L+ N + +E++ + S+ L+ + + NA F G +++ Sbjct: 133 TSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPIVSNACQKAFVTNRVGDFGLLLG 192 Query: 182 FLLMGRESGSLDFASFRTL----------SLSPGLASAVFLLAFFGFGAKAGMMPLHSWL 231 L + +GS +F + + + L F G AK+ PLH WL Sbjct: 193 ILGLYWITGSFEFQDLFEIFNNLIYNNDNEVHFLFVTLCAFLLFSGAIAKSAQFPLHVWL 252 Query: 232 PRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLG 290 P A P+ SAL + MV GIF + + LL + + L+ IG I+ LLG Sbjct: 253 PDAM-EGPTPISALIHAATMVAAGIFLVAR----LLPLFVVIPYIMKLIALIGIITVLLG 307 Query: 291 VLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHAL 350 A A++DIKR LA+ST+ +G +LA+G+ ALFHL+ HA Sbjct: 308 ATLAFAQKDIKRGLAYSTMSQLGYTMLALGMG--------------SYRAALFHLITHAY 353 Query: 351 FKGLLFLGAGAIISRL---------HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPL 401 K LLFLG+G+II + + +M MG L K +P T A L+G L++ IPPL Sbjct: 354 SKALLFLGSGSIIHSMEVIVGYSPDKSQNMVLMGGLTKHVPITKIAFLLGTLSLCGIPPL 413 Query: 402 NGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCG 457 F S+ +S S PI ++ T GL ++Y +TF G Sbjct: 414 ACFWSKDEILNDSWSYS-----------PIFAIIAFSTAGLTAFYMFRVYLLTFEG 458 >UniRef50_A4XS82 NADH dehydrogenase (Quinone) n=1 Tax=Pseudomonas mendocina ymp RepID=A4XS82_PSEMY Length = 906 Score = 291 bits (744), Expect = 9e-77, Method: Composition-based stats. Identities = 150/565 (26%), Positives = 258/565 (45%), Gaps = 45/565 (7%) Query: 10 SLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQL---HAGVTLVARFA- 65 L L +LA++ L RL +G ++ ++ I + Q+ G T++ + Sbjct: 1 MLYLLSLIALAAVSAPALTRLLGARTGWLLMLAPLVAFIWFVQQIPLVAGGETVLQSLSW 60 Query: 66 PPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASM 125 P +L+LR+D LS L+IS + + LY+ +Y+ + G ++ +F+ +M Sbjct: 61 IPALGINLSLRLDGLSLLFALLISGIGSLIVLYAGSYLSSHVHLG--RFHAYLLVFMLAM 118 Query: 126 VALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKT-SINAGMLYFFIAHAGSVLIMIAFLL 184 + L++ D+ V +E+ S++S+ L+ + DK S A + I G + ++ +L Sbjct: 119 LGLVLADDLVAMFVFWELTSIASFLLISFQHDKAVSRRAALQALLITGGGGLALLAGLIL 178 Query: 185 MGRESGSLDFASFRTLSL-SPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHAS 243 +G +G+ F+S + L A+ LL G K+ +P H WLP A AP+ S Sbjct: 179 LGGATGNWQFSSLSAEQIEGHALLPAIMLLVLLGCFTKSAQVPFHLWLPNAM-NAPTPVS 237 Query: 244 A-LMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKR 302 A L S MVK GI+ + ++ L G WG L++ GA +A+LG A + D+KR Sbjct: 238 AYLHSATMVKAGIYLLARLNPVLGGSIG----WGTLLITFGAATAVLGAFLAFRQTDLKR 293 Query: 303 LLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAI 362 LLA++TV +G + + +G T GL + +L+ H+L+KG LF+ GAI Sbjct: 294 LLAYTTVTVLGQLTMLIGTN-----------TSYGLQAFVLYLVAHSLYKGALFMAVGAI 342 Query: 363 ISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEA 422 T ++ ++G L + MP T AA + + + +PP GFI++ + + L + + Sbjct: 343 DHATGTRELARLGGLIRFMPLTGAAVALAAFSNAGLPPFFGFIAKEFKYSGLIEMGHI-G 401 Query: 423 VALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLA 482 A+ L + +L GL ++ TF G R + EV M + +LLA Sbjct: 402 WAVTLVMILTNALLFAAAGL-------VFLQTFLGR-RGDYPRTPHEVGLPMWLGPMLLA 453 Query: 483 ALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMP 542 + +W NT VA G V +TP+L+ L + Sbjct: 454 IGGFFLGAWNAW-------PETWLVNTAVQAVARGPVDVNLYLWGGITPALVASL---VT 503 Query: 543 LLPGLYWLWCRSR-RAAFRRTGDAW 566 + G+++ R R R R AW Sbjct: 504 VSLGVFFYLLRDRVRQVLDRANAAW 528 >UniRef50_Q466B6 F420H2 dehydrogenase subunit L n=5 Tax=Methanosarcinales RepID=Q466B6_METBF Length = 667 Score = 290 bits (743), Expect = 1e-76, Method: Composition-based stats. Identities = 138/705 (19%), Positives = 277/705 (39%), Gaps = 79/705 (11%) Query: 4 LQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGG--VIGIISGITQLHAGVTLV 61 ++ + + L + F G + + VI ++ + L ++ Sbjct: 1 MEEFAFLIPLLPALAFVITFFFGRKMPSGGAIVPILAIAASFVISLMITLRLLANPDEVI 60 Query: 62 ARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIF 121 ++ P F ++ + +D L+A M+ ++S + ++ +Y+++YM G+ A +F Sbjct: 61 SQSYPWFAVLNIGVLIDPLAAVMLSMVSFVSLLIHIYAVSYMSGDPGE--ARYFAETALF 118 Query: 122 IASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLY-FFIAHAGSVLIMI 180 A+M++L++ DN V +E++ L S+ L+ ++ S A F G V+ + Sbjct: 119 TAAMLSLVLSDNILQLFVSWELVGLCSYLLIGFWFERPSAAAAAKKAFLTTRIGDVMFLT 178 Query: 181 AFLLM---------GRESGSLDFASFRTLSLSPGL--------------ASAVFLLAFFG 217 +++ G + G+ S P L + + LL F G Sbjct: 179 GIIVLTSDILKLAGGFQDGTYLLRFDEIFSYIPQLSALQTNIFGFEVSHLTIITLLFFGG 238 Query: 218 FGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGI 277 K+G PLH WLP A + ++ + + MV G++ + + +A + Sbjct: 239 AVGKSGQFPLHVWLPDAMEGPTTVSALIHAATMVTAGVYLVARTFPMFIAAPDSLM---- 294 Query: 278 LVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVG 337 +V +G +AL + D+KR+LA+ST+ +G ++L +G+ + + Sbjct: 295 VVAYLGGFTALFAGTMGIVMNDLKRVLAYSTISQLGYMMLGLGLG--------SAIGLEA 346 Query: 338 LLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAIS- 396 + +LFHL+NHA FK LLFL AG++I + T DM ++G + K MP TAA I LA++ Sbjct: 347 IGISLFHLINHAFFKALLFLCAGSVIHAVGTQDMRELGGVRKVMPVTAATMAIAALALAG 406 Query: 397 -AIP----PLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMY 451 IP +GF S+ ++ + + A IA L + ++ Sbjct: 407 FGIPGTSIGTSGFFSKDAIIEAAYLFGENSNNWIPYAFSIA------AALLTSIYIFRLI 460 Query: 452 GITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASW----LAPKIMHIAHAFT 507 +TF G PRS + E P M + + +LA ++ + Sbjct: 461 FMTFTGKPRSDY--HGHESPAIMTIPLSILAIFSLVFGGLTKTGFMNFLEETFANGFVNL 518 Query: 508 NTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWA 567 N LV + L +++ L + R + Sbjct: 519 NIGGLAALGRNELVGTAGSESLFVQWLPMIVAVAGLAVAFVIYYLRIIKLGPL------- 571 Query: 568 CGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDE 627 + P+ + + + ++ + V A + Sbjct: 572 -------------ASMKNPVYRLLYKRYY-QHKIYTEFFSLGIVYGVIALLSQVLDVIID 617 Query: 628 RVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLIAIAV 672 ++ I T +++E++ +Q+G + Y + V+A + +L+I + + Sbjct: 618 SIVEGIGILTVGVSEELRRVQTGVVQTYAIVVIAGVSLLIILVKL 662 >UniRef50_A1WYN7 NADH dehydrogenase (Quinone) n=5 Tax=Gammaproteobacteria RepID=A1WYN7_HALHL Length = 772 Score = 290 bits (742), Expect = 1e-76, Method: Composition-based stats. Identities = 127/531 (23%), Positives = 221/531 (41%), Gaps = 40/531 (7%) Query: 28 DRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAPPFEFADLTLRMDSLSAFMVLV 87 R + + +++ V + + P + +L+ +D LS L+ Sbjct: 24 RRAGWAFAALPAVLTLYFATFLPQIVGGETVWMEYTWVPGLD-VNLSFYVDGLSLLFALL 82 Query: 88 ISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLS 147 IS + LY+ Y+ + + F+ASM+ L++ DN + +E+ S++ Sbjct: 83 ISGIGTFVLLYASDYLDGDD--RQPRFYVHILAFMASMLGLVLSDNLITLFIFWELTSIT 140 Query: 148 SWFLVIA-RQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASF---RTLSLS 203 S+ L+ +D + + + G + ++ F+++G + + + Sbjct: 141 SYMLIGYDNEDAKARRYALQGLLVTVGGGLALLAGFIMLGIVGDTYTISELLEQGDVIRE 200 Query: 204 PGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASA-LMSGVMVKIGIFGILKVA 262 + LL G K+ +P H WLPRA AAP+ SA L S MVK G+F + K+ Sbjct: 201 HEWYVPLTLLILLGAFTKSAQVPFHFWLPRAM-AAPTPVSAYLHSATMVKAGVFLLAKLH 259 Query: 263 MDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVA 322 L G W L+ +GAI+ G +A+ IK +LA STV +G + + G+ Sbjct: 260 PAL----GDTALWMTLLPLVGAITMFTGAYFAVRSTGIKGVLANSTVMALGTLTMLAGIG 315 Query: 323 MVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMP 382 G ++ LL H+L+KG LFL AGA+ T ++ +MG L MP Sbjct: 316 TEG-----------AMIAFGAFLLAHSLYKGALFLVAGALDHETGTKEILQMGGLRHAMP 364 Query: 383 WTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGL 442 TA + L+++ IPPL GF+ + +S+ + AV LA A++++ V G + Sbjct: 365 KTAVLAAVSALSLAGIPPLFGFLGKELMLESVLEAPYLSAVLALLALGTAVLVVIVAGIV 424 Query: 443 AVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHI 502 A+ F R+ +E E P M+ +L L VL L I + Sbjct: 425 AIRPFF---------GERTETPKEPHEAPPGMLAGPAVLGTLSVLFGLFPFLPEGLIGAV 475 Query: 503 AHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCR 553 A + P +++ +H P ++ L +A W R Sbjct: 476 ASSLAGEP-------VSVSLSLWHGINLPLIMSLFAIAAGAFLYTRWDQVR 519 >UniRef50_A2SS19 Membrane bound hydrogenase subunit mbhH n=3 Tax=Euryarchaeota RepID=A2SS19_METLZ Length = 523 Score = 290 bits (742), Expect = 1e-76, Method: Composition-based stats. Identities = 141/524 (26%), Positives = 231/524 (44%), Gaps = 25/524 (4%) Query: 6 LLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFA 65 L+ L L F+ + I L+ S + VI I+ T+ A Sbjct: 12 LIAVPLFCAFLVPLIGRFVPKIRDAWIVLASFASSLLAVITAITVYTKGTIVYVFGAAAG 71 Query: 66 PPFEFAD-------LTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFM 118 P D + +D AFM+L +++ LY ++ +E GK Sbjct: 72 TPAAPIDSGGIPFRIIFTIDGFGAFMLLSAAIVSFAVVLYLISSQKERSGKSE--FYALY 129 Query: 119 NIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLV-IARQDKTSINAGMLYFFIAHAGSVL 177 + A + ++ + F F V E+ SL+ LV R+ + + Y + G ++ Sbjct: 130 LLLTAGVFGMVSTGDMFNFFVFLEINSLAGAALVSYHRRGGIAAEGALKYLIVNTVGGLM 189 Query: 178 IMIAFLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPA 237 ++ A L+ + SL+ A + L +L KAG +P H P A+ Sbjct: 190 VLFAIGLLYAQYNSLNMAVIASQMTLSTLNIIALVLFVAALAMKAGSVPFHFATPDAYSV 249 Query: 238 APSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAE 297 APS +A M V + G++G+ ++ L T + G +V+ +G +S ++GV A+ + Sbjct: 250 APSGITAAMI-VASQAGLYGMFRILFTLYGDTFNTVTIGWVVIILGVLSMVIGVTMAIPQ 308 Query: 298 QDIKRLLAWSTVENVGIILLAVGVAM--VGLSLHDPLLTVVGLLGALFHLLNHALFKGLL 355 +D+KRLLA+ V G +LL VGVA+ +G L + G LFH++NHA++KGLL Sbjct: 309 KDVKRLLAYHAVSQTGYMLLGVGVALAVLGDPLAMASYGQTAMEGGLFHIINHAMYKGLL 368 Query: 356 FLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLF 415 FL GA+I R + KMG L M WT LIG LAI+ IPP NGF S+ ++S+F Sbjct: 369 FLAVGAVIYRTGVWSLNKMGGLGHNMKWTMIFFLIGALAIAGIPPFNGFASKLMIYESVF 428 Query: 416 SLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMI 475 + P ++ V L + F+K++ F G P+ E +EVP MI Sbjct: 429 A-----------FNPALSIIAMVVSILTLASFMKVFHSMFMG-PQLPEYAEVKEVPKLMI 476 Query: 476 VAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIA 519 M++L + L + ++ A A + + + Sbjct: 477 AGMVILTIFVIGFGLVPDLVVNNLIAPAANALIDKGAYITAVLG 520 >UniRef50_C6XJX2 Proton-translocating NADH-quinone oxidoreductase, chain L n=6 Tax=cellular organisms RepID=C6XJX2_HIRBI Length = 761 Score = 289 bits (741), Expect = 2e-76, Method: Composition-based stats. Identities = 148/698 (21%), Positives = 242/698 (34%), Gaps = 93/698 (13%) Query: 32 IKLSGITSLVGGVIGIISGITQLHAGVTLVARFAPPFEF-ADLTLRMDSLSAFMVLVISL 90 L + SG+ + L+AR+ A+ +R+D++S M+ V++ Sbjct: 82 AALCAASLFFAQFFAASSGVADTQS--VLIARWIDVGAMQANWAIRIDTMSIVMMFVVTS 139 Query: 91 LVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWF 150 + + +YS YM G+ A ++++F M+ L+ DN +E + L+S+ Sbjct: 140 VSSLVHIYSWGYMSHDMGR--ARFFTYLSLFTFMMLMLITADNFLQLFFGWEGVGLASYL 197 Query: 151 LVIARQDKTSINAG-MLYFFIAHAGSVLIMIAFLLMGRESGSLDFAS------------- 196 L+ K S NA + F G V + + + G+++FA Sbjct: 198 LIGFWYHKPSANAASIKAFVTNRVGDVGFALGIMTVFLVFGTVEFAPVFEAIKTNATVTP 257 Query: 197 -------------FRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHAS 243 L ++ + +L F G K+ + LH WLP A P+ S Sbjct: 258 FAFGEAGHAQDVVISVLGVTAPAMEIIGVLLFIGAMGKSAQLLLHVWLPDAM-EGPTPVS 316 Query: 244 AL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKR 302 AL + MV G+ ++ + ++ IGA +A+ AL + DIKR Sbjct: 317 ALIHAATMVTAGVVLVV----LCSPIYEFTTYASAMITFIGAATAIFAATVALMQNDIKR 372 Query: 303 LLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAI 362 ++A+ST +G + A GV A+FHL HA FK +LFL AGA+ Sbjct: 373 VIAYSTCSQLGYMFFAAGVG--------------AYDAAMFHLFTHAFFKAMLFLTAGAV 418 Query: 363 ISR-LHTHDMEKMGALAKRMPWTAAACLIGCLAI--SAIP----PLNGFISEWYTWQSLF 415 I DM KMG L +MP LIG LAI IP GF S+ + F Sbjct: 419 IHGLADEQDMRKMGGLRAKMPIAWLMMLIGTLAITGVGIPGTHIGFAGFFSKDAILEEAF 478 Query: 416 SLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPR--STHAEEAQEVPNT 473 + A AG +A L ++ +TF G R + A + P Sbjct: 479 LSGGMYAQFAFWAGIVA-------ALLTSFYSWRLMIMTFHGKTRANKHDFDHAHDAPLV 531 Query: 474 MIVAMLLLAALCVLIA--LSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTP 531 M + + LLA VL ++++ + ++ + + H VT Sbjct: 532 MGMPLYLLAGGAVLAGVVFYSAFIGDLTKVNKDFWGSSIYKAEIAETSHDGEDGHAPVTE 591 Query: 532 SLLLL----------------LLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACG------ 569 ++ A G AW G Sbjct: 592 HVVAANSHGEENHGDDHAEASGHAAADADHGDGHHGIHPPTWVLWAPFCAWMSGLVLAII 651 Query: 570 -YGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDER 628 YG+ + S P+ S + + D D Sbjct: 652 FYGFVPHIPRSMGERSGPMHAFLSNKWYFDEIYDFVFVKGSKALGDFFWKIIDMKIIDGL 711 Query: 629 VIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVL 666 I + T+ A + L +G Y ++ A VV Sbjct: 712 GPNGISNLTKASAGGLSRLHTGYLYHYAFIILIAAVVF 749 >UniRef50_A5UV30 NADH dehydrogenase (Quinone) n=4 Tax=Bacteria RepID=A5UV30_ROSS1 Length = 793 Score = 289 bits (740), Expect = 2e-76, Method: Composition-based stats. Identities = 132/553 (23%), Positives = 246/553 (44%), Gaps = 44/553 (7%) Query: 10 SLILYLFASLASLFLLGLDRLAIKLSGITSLV---GGVIGIISGITQLHAGVTLVARFAP 66 L L ++ L R A + +G + + +I IS + + G L +A Sbjct: 1 MLTAVLSGFGGAIAAPWLHRFAPRHAGWLAALLPFALMIYFISLVPAVAGGDALRFSYAW 60 Query: 67 -PFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASM 125 P +L+ R+D LS L+I+ + + +Y+ Y+ G M + IF+A+M Sbjct: 61 VPGLGVNLSFRIDGLSLLFALLITGIGTLVLIYAGGYLANDPMLG--RMLTLLLIFMAAM 118 Query: 126 VALLVMDNAFWFIVLFEMMSLSSWFLVIA-RQDKTSINAGMLYFFIAHAGSVLIMIAFLL 184 + ++ DN V +E+ ++SS+ L+ + + + A + + G + ++ +L Sbjct: 119 LGIVTSDNLIALFVFWELTTISSYMLIGYKHEYEKARKAALQSLLVTGIGGLALLAGIVL 178 Query: 185 MGRESGSLDFASF---RTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSH 241 +G+ +G+L+ + + + L + L FG K+ P H WLP A A Sbjct: 179 LGQIAGTLELSEMLKQGDVVRAHPLYGGILALVLFGAFTKSAQFPFHFWLPGAMEAPTPV 238 Query: 242 ASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIK 301 +S L S MVK G+F + ++ L G W +L+ G + ++G A+ + D+K Sbjct: 239 SSYLHSATMVKAGVFLLARLNPVL----GGTEAWQLLLTFFGGATMIVGSFLAVQQTDLK 294 Query: 302 RLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGA 361 R+LA++TV +G ++L +GV T + A+ L HAL+KG LF AG+ Sbjct: 295 RILAYTTVSALGTLVLLIGVG-----------TDDAIKAAMVFTLGHALYKGALFQVAGS 343 Query: 362 IISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVE 421 + D+ ++G L MP TAAA ++ L+++ +PP+ GFI++ +++ S Sbjct: 344 VDHETGARDISQLGGLRTAMPITAAAAMLAALSMAGLPPMLGFIAKEVQYKANLSE---- 399 Query: 422 AVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLL 481 PI + + +T L V+ + F G P T + A E P +M + + L Sbjct: 400 --------PILIGVALLTNILTVVAAGFVSLRVFTGQPVHT-PKHAHEAPLSMWLGPVAL 450 Query: 482 AALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAM 541 A + L ++ + ++ A + + A+ + + L L + Sbjct: 451 ALGGLGAGLFSTQIGNFLIGPATG------SVLGKVKAVELVLWAGIEGAAGQALALSGV 504 Query: 542 PLLPGLYWLWCRS 554 LL G+ + RS Sbjct: 505 TLLAGIGLYYARS 517 >UniRef50_Q5FC98 NADH-quinone oxidoreductase chain L n=18 Tax=Rickettsiales RepID=Q5FC98_EHRRW Length = 641 Score = 289 bits (739), Expect = 3e-76, Method: Composition-based stats. Identities = 110/437 (25%), Positives = 194/437 (44%), Gaps = 50/437 (11%) Query: 71 ADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLV 130 +L +DSLS M+++++ + VV +YS+ YM G AA ++++F M+ L+ Sbjct: 88 IHWSLYLDSLSIIMLVIVNTVSVVVHIYSIGYMSHDVG--AARFLSYLSLFTFFMLILVT 145 Query: 131 MDNAFWFIVLFEMMSLSSWFLVIARQDKTSI-NAGMLYFFIAHAGSVLIMIAFLLMGRES 189 N + +E + L S+ L+ +K+S A M F I G ++ + + Sbjct: 146 SGNFLQLFLGWEGVGLCSYLLIGFWFEKSSATKAAMKAFIINRVGDFFFILGIIAVFLVF 205 Query: 190 GSLDFAS--------------FRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAH 235 SLDFA + +L F G K+ + LH+WLP A Sbjct: 206 DSLDFARVFHSIVNSDYRIGIINFFGYQVPYIDVICVLLFIGCMGKSAQIGLHTWLPDAM 265 Query: 236 PAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYA 294 P+ ASAL + MV G+F +++ + L ++ +G I+ L A Sbjct: 266 -EGPTPASALIHAATMVTAGVFLVVRCSPLF----ELSDVARHFILIVGTITCLFAATIA 320 Query: 295 LAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGL 354 + + D+K+++A+ST +G + LA G++ + A+FHL+ HA FK L Sbjct: 321 IVQTDLKKIIAYSTCSQLGYMFLACGLSAYSV--------------AIFHLMTHAFFKAL 366 Query: 355 LFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSL 414 LFL AG II H D+ K+ A +++P+T IG LA++ I P GF S+ +S Sbjct: 367 LFLCAGNIIHSTHEQDIYKIRASWRQIPFTYVLTWIGSLALAGIFPFAGFYSKDLIIESS 426 Query: 415 FSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTM 474 +++S A ++ + L ++ I F G + + E M Sbjct: 427 YNVSNT-----------AFIISNIVAFLTAFYSWRLIIIVFHGI--DSEKKSIFESGKVM 473 Query: 475 IVAMLLLAALCVLIALS 491 ++ +L+L+ + + Sbjct: 474 LLPLLVLSVGSIFSGMW 490 >UniRef50_Q649J3 NADH dehydrogenase/oxidoreductase n=4 Tax=Archaea RepID=Q649J3_9ARCH Length = 513 Score = 288 bits (738), Expect = 4e-76, Method: Composition-based stats. Identities = 108/497 (21%), Positives = 231/497 (46%), Gaps = 24/497 (4%) Query: 4 LQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVAR 63 +++ +FA+ L +++ A + ++ ++ +S + ++ T+ Sbjct: 5 EHFSVLVIVISMFAAFTILIAGKVNKKAAFPIALVTIFIQLLLSLSILKRVLTEGTIHYW 64 Query: 64 FAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIA 123 + +D+L+AF+++V+ + +C +YS + + + + + Sbjct: 65 LGGWSPPWGIEYVIDTLNAFVLVVVLFMSFMCVIYSKRSIEKEQPHKIVLFYVVFQLLVT 124 Query: 124 SMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFL 183 + + V + F V E+ +L+++ L+ + ++ A Y + G+ +++ Sbjct: 125 GLCGITVTGDIFNLYVFLEISALAAYALIALAGGR-ALKASYNYVIMGSLGACFVLLGIG 183 Query: 184 LMGRESGSLDFASFRTLSLS---PGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPS 240 + +G+L+ A L A F+ G K + PLH W P A+ APS Sbjct: 184 FLYAVTGTLNIADLSRLLPPLYGNRAVQAAFVFFAVGLSIKVALFPLHVWQPDAYTYAPS 243 Query: 241 HASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGI--LVMAIGAISALLGVLYALAEQ 298 S +++ M K+ ++ +++V + + + GI + I A+ + G + A+ + Sbjct: 244 VVSVIIATAMAKVSVYALIRVIFSVFTVKFIDTYVGIDVALCWIAAMGIIAGSVLAIMQT 303 Query: 299 DIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLG 358 ++KR+LA+S+V +G I+L +G+A ++ GL+GA+ H+LNHA+ KG LF+ Sbjct: 304 NLKRMLAYSSVAQIGYIVLGIGLA---------PMSAWGLVGAVAHILNHAIMKGCLFMA 354 Query: 359 AGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLS 418 AGA I +L D+ L K+MP+ + A I +++ +PP GF S+ + + + Sbjct: 355 AGAFIYKLGLRDIRDFEGLGKKMPYASVAFTIAAISMIGVPPCTGFASKLFLILASLQAT 414 Query: 419 RVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGA-----PRSTHAEEAQEVPNT 473 L ++G I + +L + L + F ++ + + +VP + Sbjct: 415 ET----LPVSGYIFVAVLLTSTLLNLAYFWRVIDRIYFVKSEEGHEGGGQETKKADVPFS 470 Query: 474 MIVAMLLLAALCVLIAL 490 M+V ML+LAALC+++ + Sbjct: 471 MVVPMLILAALCIVLGI 487 >UniRef50_A6DPK7 NADH-ubiquinone/plastoquinone family protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DPK7_9BACT Length = 766 Score = 288 bits (738), Expect = 4e-76, Method: Composition-based stats. Identities = 141/559 (25%), Positives = 244/559 (43%), Gaps = 43/559 (7%) Query: 7 LTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFA- 65 L +S+ L A+ A+ L + I S ++ +G +L + Sbjct: 3 LLFSVALIFLAAFATPALARFIPNKRRALFAIVPATSFYLIFSKAQEIASGTSLSEDYTW 62 Query: 66 PPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASM 125 P +L R+D LS M L+I+ + + +Y+ Y+++Y K + IF+A+M Sbjct: 63 IPRFGINLNFRLDGLSFLMALLITGIGTLILIYAAGYLKDY--KANTRFYTIIQIFMAAM 120 Query: 126 VALLVMDNAFWFIVLFEMMSLSSWFLVIA-RQDKTSINAGMLYFFIAHAGSVLIMIAFLL 184 + L++ DN + +E+ ++SS+ LV ++ + + + G + ++ LL Sbjct: 121 LGLVLSDNLISMFIFWELTTVSSFLLVGFNHENPDARKKALQALIVTAGGGLAMLAGLLL 180 Query: 185 MGRESGSLDFASF---RTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSH 241 +G +G+ + L + L AV +L G K+ P H WLP A AAP+ Sbjct: 181 LGNIAGTYQVSELIQHSELIKNHKLYEAVVILVCLGAFTKSAQFPFHFWLPNAM-AAPTP 239 Query: 242 ASA-LMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDI 300 SA L S MVK G+F + ++ L G +W L++ +G + LL L +D+ Sbjct: 240 VSAYLHSATMVKAGVFLLARLTPVL----GGTDFWMYLLVCVGGFTMLLAATLGLIYRDL 295 Query: 301 KRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAG 360 K++LA+ST+ +GII L +G+ T A+ L HAL+K LF+ AG Sbjct: 296 KKILAYSTLSVLGIITLLIGMG-----------TEFSFKAAIMMLFAHALYKATLFMVAG 344 Query: 361 AIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRV 420 +I T D+ K+ L K MPWT AA + L+ + PP GF+++ Y + S + Sbjct: 345 SIDHEAGTRDITKLRGLRKVMPWTFAAAALAALSQAGFPPFTGFLAKEYFYGSALDHN-- 402 Query: 421 EAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLL 480 + + ++ + K+ F G R+ A E P +M++ + Sbjct: 403 -------LKAVLISSAFISSMFLFVLAFKIGFQPFLG--RANKKIHAHEAPPSMLLGPIA 453 Query: 481 LAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLA 540 L +L +L L +A I+ A A T V + T L+L L+ Sbjct: 454 LGSLSLLFGLFPGPIAKYILSPALASFTTSFHPVKLKLWHGVNTA--------LILSLIT 505 Query: 541 MPLLPGLYWLWCRSRRAAF 559 + + LY + + RR A Sbjct: 506 LTVGFILYNIRKKIRRNAT 524 >UniRef50_B1NWJ6 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic n=3586 Tax=root RepID=NU5C_MANES Length = 752 Score = 288 bits (738), Expect = 4e-76, Method: Composition-based stats. Identities = 121/476 (25%), Positives = 203/476 (42%), Gaps = 58/476 (12%) Query: 7 LTWSLILYLFASLASLFL--LGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARF 64 +T + + + A L L R+ S + + I I Q+++ + Sbjct: 14 VTLPVPMLIGAGLLLFPAATKKLRRMWAFPSVFLLSIVMIFSIDLSIQQINSSFIYQYIW 73 Query: 65 APPFEFADLTLR----MDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNI 120 + D +L +D L++ + ++I+ + ++ YS YM +G +M+ Sbjct: 74 S-WTINNDFSLEFGHLIDPLTSILSVLITTVGILVLFYSDNYMSHDQG--YLRFFAYMSF 130 Query: 121 FIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKT-SINAGMLYFFIAHAGSVLIM 179 F SM+ L+ N + +E++ + S+ L+ + + NA F G ++ Sbjct: 131 FTTSMLGLVTSSNLIQIYIFWELVGVCSYLLIGFWFTRPIASNACQKAFVTNRVGDFGLL 190 Query: 180 IAFLLMGRESGSLDFASFRTL--------SLSPGLASAVFLLAFFGFGAKAGMMPLHSWL 231 + L + +GS +F + ++ + +L F G AK+ PLH WL Sbjct: 191 LGILGLYWITGSFEFRDLFKIFNNLIYNNQVNFLFVTLCAVLLFSGAIAKSAQFPLHVWL 250 Query: 232 PRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLG 290 P A P+ SAL + MV GIF + + L + + L+ IG I+ LG Sbjct: 251 PDAM-EGPTPISALIHAATMVAAGIFLVAR----LFPLFVIIPFIMNLIALIGIITVFLG 305 Query: 291 VLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHAL 350 ALA++DIKR LA+ST+ +G ++LA+G+ ALFHL+ HA Sbjct: 306 ATLALAQKDIKRSLAYSTMSQLGYMMLALGMG--------------SYRAALFHLITHAY 351 Query: 351 FKGLLFLGAGAIISRL---------HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPL 401 K LLFLG+G+II + + +M MG L K +P T A L+G L++ IPP Sbjct: 352 SKALLFLGSGSIIHSMEAILGYSPDKSQNMVLMGGLTKHIPITKTAFLLGTLSLCGIPPF 411 Query: 402 NGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCG 457 F S+ L PI ++ T GL ++Y +TF G Sbjct: 412 ACFWSKDEILNDS-----------WLYSPIFAIIACFTAGLTAFYMFRVYLLTFDG 456 >UniRef50_Q1QZ48 NADH dehydrogenase (Quinone) n=15 Tax=cellular organisms RepID=Q1QZ48_CHRSD Length = 932 Score = 288 bits (737), Expect = 5e-76, Method: Composition-based stats. Identities = 128/523 (24%), Positives = 225/523 (43%), Gaps = 40/523 (7%) Query: 38 TSLVGGVIGIISGITQLHAGVTLVARFAP-------PFEFADLTLRMDSLSAFMVLVISL 90 +L+ + +++ + L ++A P P DL LR+D LS VL+I Sbjct: 28 CALLTAAMPLVALLIALREAPGVLAGDVPRLAFSWVPALGLDLALRLDGLSLMFVLLILG 87 Query: 91 LVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWF 150 + ++ LY+ Y+ F+ +F+A+M+ +++ DN + +E+ SLSS+ Sbjct: 88 IGLLIILYARHYLS--TADSMPRFYAFLMLFMAAMLGIVMADNLILLWMFWELTSLSSFL 145 Query: 151 LVIARQDK-TSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASF---RTLSLSPGL 206 L+ + + + + G + ++ +L+G+ G+ D + R + L Sbjct: 146 LIGFWNHQSAARKGARMALAVTGMGGLALLAGLILIGQIVGTFDMQTVLDSRDVILDDPR 205 Query: 207 ASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASA-LMSGVMVKIGIFGILKVAMDL 265 LL G K+ P WLP+A AAP+ SA L S MVK G+F + ++ L Sbjct: 206 YLPALLLILLGAFTKSAQFPFQFWLPQAM-AAPTPVSAFLHSATMVKAGVFLLARLHPAL 264 Query: 266 LAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVG 325 W LV G ++ L G +AL + D+K +LA+STV ++G+I + G+ Sbjct: 265 AGSQE----WLYLVSLTGLVTMLYGAYFALIKLDLKAILAYSTVSHLGLITMLFGL---- 316 Query: 326 LSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTA 385 + + ++ LFH+LNHA FK LF+ AG + T D+ K+ L + MP T Sbjct: 317 -------DSRMAVVAGLFHILNHATFKAALFMTAGIVDHECGTRDIRKLKGLWRYMPMTT 369 Query: 386 AACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVM 445 A I +++ +P NGF+S+ + +A + + V LA Sbjct: 370 ALAAITAASMAGVPLFNGFLSKEMMLAETLGTPLLGGLAWLIPT-----LATVGSILAAS 424 Query: 446 CFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHA 505 ++ TF + E P M + +L+LA +CV++ + P + Sbjct: 425 YSLRYVRNTFFDGKPRELEKTPHEAPFPMRLPILILAIICVVVGI-----LPALTTTDLL 479 Query: 506 FTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLY 548 A V + L +H P L+ + LA + L Sbjct: 480 TAAADAALVGAAPELHLSIWHGFNLPLLMSAIALAGGIAVYLL 522 >UniRef50_B0SFU4 NADH dehydrogenase (Ubiquinone), M chain n=6 Tax=Leptospira RepID=B0SFU4_LEPBA Length = 579 Score = 288 bits (737), Expect = 5e-76, Method: Composition-based stats. Identities = 106/512 (20%), Positives = 209/512 (40%), Gaps = 37/512 (7%) Query: 11 LILYLFASLASLFLLGLDRLAIKLSGITSLVGGVI--GIISGITQLHAGVTLVARFAPPF 68 +I S + + + +S ++S ++ G+ AG+ V Sbjct: 9 IIFLPIVSTFLIVIQKRVGAVVVISALSSAFTTILSLGLFFFYDASKAGLQFVHWIPDWI 68 Query: 69 EFA----DLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIAS 124 D + +D +S + + + + + S+ S + + K + + + Sbjct: 69 LSGKLSVDYHVGLDGVSLLLFALTTFMFFLSSIASWSNI----PKKIKEFHICLLVLETA 124 Query: 125 MVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLL 184 ++ + N F V +E+M L ++ + A + YF + AGS+ ++ L Sbjct: 125 VLGVFASGNLVLFYVFWELMVLPMVLMIGIWGGEERTKAALKYFLFSMAGSLFMLGGILT 184 Query: 185 MGRESGSLDFASFRTLSL---SPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSH 241 + ++G S T SL S L +F F F K + P H+W+P H AP+ Sbjct: 185 LYFKTGKTSIESLSTASLALYSEPLQWFLFFSFFLAFAIKIPLFPFHTWMPDVHTQAPTV 244 Query: 242 ASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIK 301 S ++GV++KIG +G ++ + + L GI + + I + G + AL + DIK Sbjct: 245 GSVDLAGVLLKIGAYGFIRFCIPFFPEQSLLSQNGIQI--LAVIGIVYGSMAALVQTDIK 302 Query: 302 RLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGA 361 R++A+S++ ++G +L + T G++G + +++H + G++FL G Sbjct: 303 RIIAYSSLSHLGFCILGIF-----------SFTTEGVVGGMLQMVSHGISTGMIFLMIGM 351 Query: 362 IISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVE 421 I R HT ++ + G LA +MP + LI L+ +P NGF+ E+ + Sbjct: 352 IYERAHTRNISEFGGLAGQMPVFSTFFLIAVLSSIGLPGTNGFVGEFLILIGAIKSNVWL 411 Query: 422 AVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLL 481 + G L ++ FVK + G ++ A+ +++ I + L Sbjct: 412 GGIAATGVVL--------GALYLLWFVKRF---LFGVSKTIQAKPYKDLSFREIGILSPL 460 Query: 482 AALCVLIALSASWLAPKIMHIAHAFTNTPPAT 513 L I L + ++ F N+ Sbjct: 461 VVLIFWIGLYPKPFLSILNSSSNVFLNSASVV 492 >UniRef50_Q34313 NADH-ubiquinone oxidoreductase chain 5 n=6 Tax=Eukaryota RepID=NU5M_DICDI Length = 670 Score = 288 bits (737), Expect = 5e-76, Method: Composition-based stats. Identities = 123/663 (18%), Positives = 251/663 (37%), Gaps = 69/663 (10%) Query: 28 DRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAPPFEFADL----TLRMDSLSAF 83 +R++IK++ ++ + + G L + + + L L DSL++ Sbjct: 25 NRISIKIAVGCMMLTAISSLYIGYEILLCNSVVHFKLGTWMQVGSLNVEYGLLYDSLTSI 84 Query: 84 MVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEM 143 M++VI+ + + LYS+ YM+E K ++++F M+ L+ DN +E Sbjct: 85 MIIVITCISSMVHLYSMDYMKEDPHK--TRFFSYLSLFTFFMMLLVTADNFVQLFFGWEG 142 Query: 144 MSLSSWFLVIARQDK-TSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFA------- 195 + + S+ L+ + + + + + G + LL+ S+DF+ Sbjct: 143 VGIMSYLLINFWYTRLQANKSALKAVILNRFGDFGLFFGILLVFLVFKSVDFSVIFTIAP 202 Query: 196 -----SFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALM-SGV 249 + L + + G K+ + LH WLP A P+ SAL+ + Sbjct: 203 FITEYTINLLGYEVNAITLIGSFIVIGVVGKSAQLGLHMWLPDAM-EGPTPVSALLHAAT 261 Query: 250 MVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTV 309 MV G+F +L+ + L + ++ IGA++ L + + DIKR++A+ST Sbjct: 262 MVTAGVFLVLRTSPLL----SYSITILNILTIIGALTTLFATTIGIVQNDIKRVIAYSTC 317 Query: 310 ENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLH-T 368 +G ++ A G+ + +++HL HA FK LLFL AG++I L+ Sbjct: 318 SQLGYMIFACGL--------------LNYNASIYHLTTHAFFKALLFLSAGSVIHGLNDE 363 Query: 369 HDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLA 428 DM KMG L MP T LIG LA++ P L+G+ S+ ++ ++ E + Sbjct: 364 QDMRKMGGLVNLMPLTYQCMLIGTLALTGFPFLSGYYSKDIILETSYATYYWEGTFAAII 423 Query: 429 GPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHA--EEAQEVPNTMIVAMLLLAALCV 486 G +A ++ +TF PR + E M++ +++LA + Sbjct: 424 GYVAAFG-------TTFYSFRLLILTFFNKPRMQYKTIAGVHEASTNMVIPLVILALCSI 476 Query: 487 LIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPG 546 I + + N+ A + + L ++ L + + Sbjct: 477 FIGYVTKDFFVGLGTPV--WNNSFFAYPYNNLILESEVLQRELKLLPLFAFIYGVITPVL 534 Query: 547 LYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLR 606 Y+ R ++ ++ + + P Sbjct: 535 FYFNIKEDRMINVKQN--------------LMVKESYFFFVKKWYFDFLSRVLIVVPFFH 580 Query: 607 LNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVL 666 L ++ + W++ + + + ++ Y Y+V ++++ Sbjct: 581 L----SYDVMNKNLDKGLWEKIGVTGVATTLVTAFTALKLKNEITLSTYISYIVQTIILI 636 Query: 667 LIA 669 ++ Sbjct: 637 IVV 639 >UniRef50_UPI0001C3127D proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3127D Length = 671 Score = 288 bits (737), Expect = 5e-76, Method: Composition-based stats. Identities = 133/602 (22%), Positives = 238/602 (39%), Gaps = 86/602 (14%) Query: 4 LQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHA------- 56 W ++ + A + L G RLA +G + ++ +S + L + Sbjct: 3 TTTWGWLVLAFPLAGTIIIGL-GHKRLARGPAGAIGTLAILLAFVSAVGALLSLQDRDEH 61 Query: 57 ----GVTLVARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAA 112 +L A L++ +D LS FM+LVI+ + + LYS++YM+ +G A Sbjct: 62 HRQLVSSLWDYAVTGSIDARLSILVDPLSVFMMLVITGVSTLIHLYSVSYMK--SDRGNA 119 Query: 113 AMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKT-SINAGMLYFFIA 171 ++N F+ SM+ L++ N IV + + +S+ L+ + + AG+ F I Sbjct: 120 RYFAYLNFFVFSMLVLVLAANFLLLIVGWAFVGAASYLLISFWYRRETATKAGIKAFVIN 179 Query: 172 HAGSVLIMIAFLLMGRESGSLDF------ASFRTLSLSPGLASAVFLLAFFGFGAKAGMM 225 G V +++ + R +G+LDF G A LL G AK+ + Sbjct: 180 VVGDVGLVLGTFFILRHTGTLDFLGTFEAVENGAFDSHNGALVAGCLLLLVGAFAKSAQV 239 Query: 226 PLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAI 285 P H+WLP A +S + + MV G++ I + + + +G Sbjct: 240 PFHTWLPDAMEGPTPVSSLIHAATMVTAGVYLISR----MFPLFEAAPAAADVGAVVGCA 295 Query: 286 SALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHL 345 + L+ AL + DIKR++A+ST+ +G +++ V LFHL Sbjct: 296 TLLIAGTIALTQTDIKRVIAYSTMSQIGYMIMGVSAG--------------AYAAGLFHL 341 Query: 346 LNHALFKGLLFLGAGAIISRL-HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGF 404 L HA FK LLF+ AG+II + ++KM + MP+T ++G LA+S +PP +GF Sbjct: 342 LTHAFFKALLFMAAGSIIGAMAGAQSLDKMSGFKRSMPFTFGCFVVGGLALSGVPPFSGF 401 Query: 405 ISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHA 464 S+ + + + V+ + L + +M F G P A Sbjct: 402 FSKDEILAFVGHRGGWFS--------VMYVVGYIGAFLTGIYTWRMIFRAFLGRPSPEAA 453 Query: 465 EEAQ--------------------------------EVPNTMIVAMLLLAALCVLIALSA 492 E E M VAM LLA ++ + Sbjct: 454 ELEHGHIAHAEYPTNPANGEREDTEVGFPGPEHVIAEREIPMKVAMGLLAVGATILGVL- 512 Query: 493 SWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWC 552 +I ++ H ++ T S + + + L ++A+ + ++++ Sbjct: 513 -----QIPNVTHVISSFLEPTFESSKYFHEHPSNGFIYFGMALGTVVALLGIAVAHYIYV 567 Query: 553 RS 554 R Sbjct: 568 RK 569 >UniRef50_Q9K1B0 NADH-quinone oxidoreductase subunit L n=127 Tax=Proteobacteria RepID=NUOL_NEIMB Length = 674 Score = 288 bits (737), Expect = 6e-76, Method: Composition-based stats. Identities = 131/633 (20%), Positives = 234/633 (36%), Gaps = 83/633 (13%) Query: 72 DLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVM 131 + +D+++A M++V++ + ++ +Y++ YM E G ++++F SM+ L++ Sbjct: 79 SVGFLVDTMTAMMMVVVTGVSLMVHIYTIGYM-HDEKVGYQRFFSYISLFTFSMLMLIMS 137 Query: 132 DNAFWFIVLFEMMSLSSWFLVIARQDKTSIN-AGMLYFFIAHAGSVLIMIAFLL-MGRES 189 +N +E + L S+ L+ + S A + F I G ++ L + Sbjct: 138 NNFIQLFFGWEAVGLVSYLLIGFYFKRPSATFANLKAFLINRVGDFGFLLGIGLVLAYFG 197 Query: 190 GSLDFASFRTL-------------SLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHP 236 GSL + + L + LL F G K+ PLH WLP + Sbjct: 198 GSLRYQDVFAYLPNVQNATIQLFPGVEWSLITVTCLLLFVGAMGKSAQFPLHVWLPDSM- 256 Query: 237 AAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYAL 295 P+ SAL + MV G+F + +++ + ++M IGAI+AL + Sbjct: 257 EGPTPISALIHAATMVTAGLFMVSRMS----PIYEMSSTALSVIMVIGAITALFMGFLGV 312 Query: 296 AEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLL 355 + DIKR++A+ST+ +G + +A+G + + A+FH++ HA FK LL Sbjct: 313 IQNDIKRVVAYSTLSQLGYMTVALGASAYSV--------------AMFHVMTHAFFKALL 358 Query: 356 FLGAG-AIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSL 414 FL AG AII H DM MG L K MP T LIG L++ P +GF S+ ++ Sbjct: 359 FLAAGSAIIGMHHDQDMRHMGNLKKYMPVTWLTMLIGNLSLIGTPFFSGFYSKDSIIEAA 418 Query: 415 FSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEE-------- 466 + A + + + + Y + F G + E Sbjct: 419 -------KYSTLPGSGFAYFAVLASVFVTAFYAFRQYFMVFHGEEKWRSLPEHHSDGHGE 471 Query: 467 ----------AQEVPNTMIVAMLLLAALCVLIALSA--SWLAPKIMHIAHAFTNTPPATV 514 E P + + ++LLA V+I A L T+ Sbjct: 472 EHHGLGKNDNPHESPLVVTLPLILLAVPSVIIGYIAIEPMLYGDFFKDVIFVNADAHPTI 531 Query: 515 ASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWEN 574 G +L LA+ + + L+ + + Sbjct: 532 HIMKEEFHGALAMVSHSLHSPVLYLAIAGVLSAWLLYVKLPHLPAKIAQT---------- 581 Query: 575 AMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIV 634 +P+ V+F + L D ++ Sbjct: 582 ---------FRPIYVLFENKYYLDALYFNVFAKGTRALGTFFWKVGDTAIIDNGIVNGSA 632 Query: 635 SATQRLAKEIQHLQSGDFRLYCLYVVAALVVLL 667 +A +++ Q+G Y +V ++VLL Sbjct: 633 KLVGAIAAQVRKAQTGFIYTYAAAMVFGVLVLL 665 >UniRef50_Q3J3E6 NADH dehydrogenase I chain L n=72 Tax=cellular organisms RepID=Q3J3E6_RHOS4 Length = 720 Score = 287 bits (736), Expect = 7e-76, Method: Composition-based stats. Identities = 110/448 (24%), Positives = 185/448 (41%), Gaps = 58/448 (12%) Query: 72 DLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMRE-----YEGKGAAAMGFFMNIFIASMV 126 + +R+D L+A M++V++ + + LYS YM + A +++ F +M+ Sbjct: 71 EWAIRVDRLTAIMLVVVNTVSALVHLYSFGYMAHDDNWNHHEHYKARFFAYLSFFTFAML 130 Query: 127 ALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSIN-AGMLYFFIAHAGSVLIMIAFLLM 185 L+ DN +E + ++S+ L+ K S N A + F + G + + + Sbjct: 131 TLVTSDNLVQMFFGWEGVGVASYLLIGFYYRKPSANAAAIKAFVVNRVGDFGFALGIMAL 190 Query: 186 GRESGSLDFASFRTLSLSPGLASAVFL------------LAFFGFGAKAGMMPLHSWLPR 233 S+ F + FL L F G K+ + LH+WLP Sbjct: 191 FFLVDSIRFDDVFAAGPELAQTNLTFLWTEWNAANLIGVLLFIGAMGKSAQLGLHTWLPD 250 Query: 234 AHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVL 292 A P+ SAL + MV G+F + +++ +++ +GA +A Sbjct: 251 AM-EGPTPVSALIHAATMVTAGVFLVCRMS----PLYEFAPDAKTMIVVVGATTAFFAAT 305 Query: 293 YALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFK 352 L + DIKR++A+ST +G + +A GV + A+FHL HA FK Sbjct: 306 VGLVQNDIKRVIAYSTCSQLGYMFVAAGVGVY--------------SAAMFHLFTHAFFK 351 Query: 353 GLLFLGAGAIISRL-HTHDMEKMGALAKRMPWTAAACLIGCLAI--SAIP----PLNGFI 405 +LFLGAG++I + H DM G L ++P T A +IG LAI IP GF+ Sbjct: 352 AMLFLGAGSVIHAMHHEQDMRNYGGLRSKIPLTFWAMMIGTLAITGVGIPLTHIGFAGFL 411 Query: 406 SEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRS--TH 463 S+ +S + A +L V ++ +TF G R Sbjct: 412 SKDAIIESA-----------WVGSGYAFWLLVVAACFTSFYSWRLIFLTFFGKERGDHHA 460 Query: 464 AEEAQEVPNTMIVAMLLLAALCVLIALS 491 + A E P M++ + +LA + Sbjct: 461 HDHAHESPTVMLIPLGVLALGAAFSGMI 488 >UniRef50_Q2RXM6 NADH dehydrogenase (Quinone) n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RXM6_RHORT Length = 505 Score = 287 bits (736), Expect = 7e-76, Method: Composition-based stats. Identities = 133/481 (27%), Positives = 212/481 (44%), Gaps = 33/481 (6%) Query: 17 ASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAPPFEFADLTLR 76 + +FL L + L+G + + V G L G L Sbjct: 43 GANGVIFLASLIFSGLALAGAIAAILAVF---PGPWTLGLGRLPWLASDQAL----FGLA 95 Query: 77 MDSLSAFMVLVISLLVVVCSLYSLTYM-----REYEGKGAAAMGFFMNIFIASMVALLVM 131 +D LS M++VI+L + LYS YM A FF+ +FI +MV L+ Sbjct: 96 LDPLSCLMLVVITLCGFLVVLYSGGYMSLGNVEHPSDANLARYYFFVCLFITAMVGLVSS 155 Query: 132 DNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGS 191 N F + +E+ +L SW L+ D ++ + I H + + A +L+ E+GS Sbjct: 156 PNYFQLFLFWELTTLCSWGLISFYGDAEALKSAYKALLITHGAGLFLAAAVVLIYVETGS 215 Query: 192 LDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMV 251 F + L+PGL S V AKA P +WLP A A +S L + MV Sbjct: 216 FAFDAINL--LTPGLKSLVIAFMGIAALAKAAQFPFFTWLPTAMAAPTPASSYLHAAAMV 273 Query: 252 KIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVEN 311 K GI+ + ++A+ + P G+ + I ++ L V+ + D+KRLLA+ST+ N Sbjct: 274 KAGIYLLARLALSV---DAFPPELGLALSVIAIVTMCLAVVLYFPQDDLKRLLAFSTIAN 330 Query: 312 VGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDM 371 +G ++L + + +G + L G + HL+ H+ K LLFL GAI T + Sbjct: 331 LGYMVLGIAMGAMG--------SRTALEGGMLHLVGHSFTKSLLFLAVGAISYATGTRKI 382 Query: 372 EKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPI 431 + L ++MP TA A ++G +AIS +PP N F S++ LS G Sbjct: 383 GLLSGLGRKMPVTALAFVLGAMAISGMPPFNMFWSKYLIVSGAIELSSTW-------GWT 435 Query: 432 AMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALS 491 V+ F+ + F G P S AE A++ M++ +++L A VL + Sbjct: 436 LAVLTLAESVAGFAWFLHIVHKVFFG-PVSPTAENARDPGAAMLIPLIVLMAFSVLSTVF 494 Query: 492 A 492 A Sbjct: 495 A 495 >UniRef50_C1AB28 NADH-quinone oxidoreductase chain L n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1AB28_GEMAT Length = 631 Score = 287 bits (735), Expect = 8e-76, Method: Composition-based stats. Identities = 146/595 (24%), Positives = 243/595 (40%), Gaps = 75/595 (12%) Query: 72 DLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVM 131 D+ D LSA M L+++ + V +YS YM ++ K ++N+F+ M+ L++ Sbjct: 82 DIAFYFDRLSAIMTLIVTGVGSVIHIYSTGYM--HDDKSFGRFFAYLNLFLFFMLLLVLG 139 Query: 132 DNAFWFIVLFEMMSLSSWFLVIARQDK-TSINAGMLYFFIAHAGSVLIMIAFLLMGRESG 190 + V +E + L+S+ L+ D + AG F G ++ L+ R G Sbjct: 140 RSMLVLFVGWEGVGLASYLLIGFWFDDLANAAAGRKAFITNRIGDAGFLLGMFLLYRAFG 199 Query: 191 SLDFASFRTLSLSPG----LASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASAL- 245 +LD + ++ AS V LL F G K+ +PL+ WLP A A P+ SAL Sbjct: 200 TLDMDTINGALVAGQGAMISASLVALLLFVGATGKSAQIPLYVWLPDAM-AGPTPVSALI 258 Query: 246 MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLA 305 + MV G++ + +++ A L ++ IG ++A AL + DIK++LA Sbjct: 259 HAATMVTAGVYLVARMS----AVYVLAPDASQVMAVIGVLTAFFAATIALVQTDIKKVLA 314 Query: 306 WSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISR 365 +STV +G + LA+GV G+ A+FH++ HA FK LFLGAG++I Sbjct: 315 YSTVSQLGFMFLALGVGAYGV--------------AIFHVMTHAFFKACLFLGAGSVIHA 360 Query: 366 LH-THDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVA 424 L D+ KMG L KR+P T I AI+ IP L GF S+ FS + A Sbjct: 361 LGGEQDIRKMGGLRKRIPVTFWTFAIATAAIAGIPGLAGFFSKDEILWYAFSSASGGAAW 420 Query: 425 LQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTH--AEEAQEVPNTMIVAMLLLA 482 + + A+T + ++ +TF GA R +H E P +M + +LA Sbjct: 421 MW-------GLAALTALMTAFYMTRLLWLTFFGASRMSHEVEHHVHESPLSMTGVLGVLA 473 Query: 483 ALCVLIALS--ASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLA 540 L V+ +L P++ +VP H + T + + L Sbjct: 474 VLSVVGGYIGVPHFLEPQLPLP----------------QVVPALEHYEHTLLYVSVALAF 517 Query: 541 MPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQ 600 + ++ + R A PL + S + + + Sbjct: 518 GGVGLAVFLYSGPASRPESIARTFA--------------------PLHALLSGKYFVDEL 557 Query: 601 LDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLY 655 D L + + + + + + R A +Q+G LY Sbjct: 558 YDRALGRPLVWISENVLLKGGDRMLLDGTLNGLGAMAHRTAALFARVQTGSLHLY 612 >UniRef50_A4X1Y8 Proton-translocating NADH-quinone oxidoreductase, chain L n=4 Tax=Micromonosporaceae RepID=A4X1Y8_SALTO Length = 649 Score = 287 bits (735), Expect = 9e-76, Method: Composition-based stats. Identities = 136/491 (27%), Positives = 217/491 (44%), Gaps = 33/491 (6%) Query: 71 ADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMRE------YEGKGAAAMGFFMNIFIAS 124 L +R+DS A + + ++ + + +YS+ Y+R +++F A+ Sbjct: 83 VTLGVRLDSTVALVAVAVAAVALAVQVYSVGYLRSGPHDEVDVDHRYPPYAAQISLFTAA 142 Query: 125 MVALLVMDNAFWFIVLFEMMSLSSWFLVIARQD-KTSINAGMLYFFIAHAGSVLIMIAFL 183 M+ ++V + +V +E+M L S+ L+ + + A M F + G V ++ Sbjct: 143 MLLVVVAGDLILLLVGWEVMGLCSYLLIAHERRLPAAPAAAMKAFLVTRVGDVGFLLGIA 202 Query: 184 LMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHAS 243 L+G +GS A + GL +A LL G K+ PLH+WLP A A P+ S Sbjct: 203 LLGVSAGSFRIADVLGHDHATGLLTAACLLLLAGVAGKSAQFPLHTWLPDAM-AGPTPIS 261 Query: 244 AL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKR 302 AL + MV G++ + ++ L Q + L ++ + +I+ LLG A+A+ D+KR Sbjct: 262 ALIHAATMVAAGVYVVARL-FPLFVQVPVALA---VLGVLASITLLLGAFAAIAQDDLKR 317 Query: 303 LLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAI 362 +LAWSTV +G + A+ V ALFHLL HA FK LLFL AGA+ Sbjct: 318 VLAWSTVSQLGYLTGALAVG--------------APTAALFHLLTHAAFKALLFLAAGAV 363 Query: 363 ISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEA 422 I T M ++G L + MP T + LIG A++ +PPL+GF S+ + + Sbjct: 364 IHAAGTALMSQLGGLRRTMPVTFWSMLIGLGALAGLPPLSGFFSKDAVLYAAEEAALHGG 423 Query: 423 VALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLA 482 A G + L ++ TF GAPRS + + P M +LLL Sbjct: 424 PAPTWVGWSVWLAGLAGVTLTAGYATRLLLRTFFGAPRSP-LRQPHDPPAVMRWPVLLLT 482 Query: 483 ALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMP 542 L+ L+ A + AT L+P + P++LL L L Sbjct: 483 VPAALLGLAG-----FSGAFAGWLEPSWSATRERPADLLPVDPLVHLGPTVLLPLGLLAL 537 Query: 543 LLPGLYWLWCR 553 + W R Sbjct: 538 GAGLAWARWRR 548 >UniRef50_P56752 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic n=1715 Tax=cellular organisms RepID=NU5C_ARATH Length = 746 Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats. Identities = 122/470 (25%), Positives = 196/470 (41%), Gaps = 52/470 (11%) Query: 7 LTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAP 66 + + L LF + L+I L I + + I Sbjct: 20 ILLGVGLLLFPTATKNLRRMWTFLSIFLLSIVMIFSIYLSIQQIFLSCIHQNVWSWTINN 79 Query: 67 PFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMV 126 F F + +D L++ M ++I+ + ++ +YS YM +G +M F SM+ Sbjct: 80 EFSF-EFGYFIDPLTSIMSILITTVGILVLIYSDNYMSHDQG--YLRFFAYMGFFNTSML 136 Query: 127 ALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKT-SINAGMLYFFIAHAGSVLIMIAFLLM 185 L+ N +E++ + S+ L+ + + NA F G +++ L + Sbjct: 137 GLVTSSNLIQVYFFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGL 196 Query: 186 GRESGSLDFASFRTL--------SLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPA 237 +GS +F + ++ + L F G AK+ PLH WLP A Sbjct: 197 YWITGSFEFQDLFEIFNNLILNNRVNLLFLTLCAFLLFVGPIAKSAQFPLHVWLPDAM-E 255 Query: 238 APSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALA 296 P+ SAL + MV GIF + ++ + + ++ IG I+ LLG ALA Sbjct: 256 GPTPISALIHAATMVAAGIFLVARLLPLFIVIPSIM----YIISLIGIITVLLGATLALA 311 Query: 297 EQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLF 356 ++DIKR LA+ST+ +G ++LA+G+ ALFHL+ HA K LLF Sbjct: 312 QKDIKRGLAYSTMSQLGYMMLALGMGSYRS--------------ALFHLITHAYSKALLF 357 Query: 357 LGAGAIISRL---------HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISE 407 LG+G+II + + +M MG L K +P T A LIG L++ IPPL F S+ Sbjct: 358 LGSGSIIHSMEAIVGYSPDKSQNMILMGGLTKHVPITKTAFLIGTLSLCGIPPLACFWSK 417 Query: 408 WYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCG 457 L PI ++ T GL ++Y +TF G Sbjct: 418 DEILNDSL-----------LFSPIFAIIACSTAGLTAFYMFRIYLLTFEG 456 >UniRef50_C1XJC0 NADH dehydrogenase subunit L n=2 Tax=Meiothermus RepID=C1XJC0_MEIRU Length = 610 Score = 287 bits (734), Expect = 1e-75, Method: Composition-based stats. Identities = 113/501 (22%), Positives = 215/501 (42%), Gaps = 49/501 (9%) Query: 64 FAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIA 123 +L +D+LS M++V++ + + ++++ YM + G + + N+FIA Sbjct: 61 LPDWLPGIPFSLNLDNLSGVMLMVVTGVGFLIHVWAIGYM--HGDPGYSRFFSYFNLFIA 118 Query: 124 SMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKT-SINAGMLYFFIAHAGSVLIMIAF 182 +M+ L++ D+ + +E + L+S+ L+ + ++++ F + G + ++A Sbjct: 119 AMLVLILGDSLPVVFIGWEGVGLASYLLIGFWYHERINVDSARKAFIVNRIGDLGFLLAM 178 Query: 183 LLMGRESGSLDFASFRTLSLSPG----LASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAA 238 L+ G+L + + G + G K+ +PL WLP A A Sbjct: 179 GLLWSMFGTLSISELAEKVEAGGYSFTTLTLAGFFLLVGAMGKSAQVPLMVWLPDAM-AG 237 Query: 239 PSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAE 297 P+ SAL + MV G++ +++ A L + L++ IG ++A G L +L + Sbjct: 238 PTPVSALIHAATMVTAGVYLLVRHAFMLHDDA----YLSGLIVFIGLLTAFYGALCSLGQ 293 Query: 298 QDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFL 357 DIKR++A++T+ +G + +AVGV + A+FH++ HA FK L+F+ Sbjct: 294 WDIKRIVAYTTLSQLGFMFVAVGVGAYWV--------------AIFHIVTHAFFKALMFM 339 Query: 358 GAGAIISRL-HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFS 416 +G++I L D+ KMG + K +P T LI A + PL GF S+ F Sbjct: 340 TSGSVIHALGGEQDVRKMGGMRKYLPATHLHGLIATFASGGLVPLAGFWSKDAILAYSFE 399 Query: 417 LSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIV 476 GP ++ + LA + ++ Y + F G R E E P M+ Sbjct: 400 -----------YGPWLWFLMLLASVLAALYSIRWYVLVFWGEYRGK--EHPHESPAVMLW 446 Query: 477 AMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLL 536 +L + + + + N + I P V +L+ Sbjct: 447 PNHILMGGAIGVGFMG-------LPYVIDYKNFIEPFLTKAIGEFP-HEKLPVLTEWVLI 498 Query: 537 LLLAMPLLPGLYWLWCRSRRA 557 L A+ + L+W + ++ Sbjct: 499 LTSAVVAIAALWWGFRFFQQK 519 >UniRef50_P29388 NADH-ubiquinone oxidoreductase chain 5 n=133 Tax=Eukaryota RepID=NU5M_ARATH Length = 669 Score = 287 bits (734), Expect = 1e-75, Method: Composition-based stats. Identities = 138/686 (20%), Positives = 254/686 (37%), Gaps = 70/686 (10%) Query: 6 LLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFA 65 LL L L + + ++ ++ +I+ R A Sbjct: 3 LLIVFLPLLGSSVAGFFGRFLGSEGSAIMTTTCVSFSSILSLIAFYEVALGASACYLRIA 62 Query: 66 PPFEF----ADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIF 121 P A DSL+ M++V++ + + LYS++YM E + +++IF Sbjct: 63 PWISSEMFDASWGFLFDSLTVVMLIVVTSISSLVHLYSISYMSEDPH--SPRFMCYLSIF 120 Query: 122 IASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDK-TSINAGMLYFFIAHAGSVLIMI 180 M+ L+ DN + +E + L+S+ L+ + + A + + G + + Sbjct: 121 TFFMLMLVTGDNFLQLFLGWEGVGLASYLLIHFWFTRLQADKAAIKAMLVNRVGDFGLAL 180 Query: 181 AFLLMGRESGSLDFASFRTLSLSP-----------GLASAVFLLAFFGFGAKAGMMPLHS 229 L ++DF++ + P S + +L F G K+ + LH+ Sbjct: 181 GILGCFTLFQTVDFSTIFACASVPRNSWIFCNMRLNAISLICILLFIGAVGKSAQIGLHT 240 Query: 230 WLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISAL 288 WLP A P+ SAL + MV G+F I + + I++ + GA+++ Sbjct: 241 WLPDAM-EGPTPVSALIHAATMVTAGVFMIARCSPLF----EYSPTALIVITSAGAMTSF 295 Query: 289 LGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNH 348 L + + D+KR++A+ST +G ++ A G++ +S +FHL+NH Sbjct: 296 LAATTGILQNDLKRVIAYSTCSQLGYMIFACGISNYSVS--------------VFHLMNH 341 Query: 349 ALFKGLLFLGAGAIISRL-HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISE 407 A FK LLFL AG++I + DM KMG LA P T A LIG L++ P L GF S+ Sbjct: 342 AFFKALLFLSAGSVIHAMSDEQDMRKMGGLASSFPLTYAMMLIGSLSLIGFPFLTGFYSK 401 Query: 408 WYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRS--THAE 465 + ++ + G A + +V+ ++ +TF S Sbjct: 402 DVILELAYTKYTIS-------GNFAFWLGSVSVLFTSYYSFRLLFLTFLVPTNSFGRDIS 454 Query: 466 EAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTF 525 + P M + ++LLA + + A A+ + ++P Sbjct: 455 RCHDAPIPMAIPLILLALGSLFVGYLAK----------DMMIGLGTNFWANSLLVLPKNE 504 Query: 526 HTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQ 585 + ++ +P+L + A + Sbjct: 505 ILAESEFAAPTIIKLIPILFSTLGAFVAYNVNPVADQFQ-----------RAFQTSTFCN 553 Query: 586 PLRVVFSALFRLRQQL-DPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEI 644 L F+ + Q L D +R + + + + I +RLA+ I Sbjct: 554 RLYSFFNKRWFFDQVLNDFLVRSFLRFGYEVSFEALDKGAIEILGPYGISYTFRRLAERI 613 Query: 645 QHLQSGDFRLYCLYVVAALVVLLIAI 670 LQSG Y ++ L + + Sbjct: 614 SQLQSGFVYHYAFAMLLGLTLFVTFF 639 >UniRef50_Q2RUH4 NADH dehydrogenase (Quinone) n=3 Tax=Alphaproteobacteria RepID=Q2RUH4_RHORT Length = 1265 Score = 286 bits (733), Expect = 1e-75, Method: Composition-based stats. Identities = 133/476 (27%), Positives = 225/476 (47%), Gaps = 39/476 (8%) Query: 80 LSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIV 139 L L+ + + + ++YS+ YM+ G G FF+ + I S++ + ++ F + Sbjct: 278 LGGLFALIFAAIGLAVTVYSVGYMKH--GHGVNRYFFFLFLMIGSLIGVATTNHLGNFYL 335 Query: 140 LFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRT 199 +E+M+ S+ LVI Q ++ AGM YF I +G+ ++ L++ + G+ + + Sbjct: 336 FWELMTWMSYLLVIHEQTAKALKAGMKYFLICASGAYVMHFGILVLHAQLGTFEISEIAP 395 Query: 200 --LSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFG 257 +LSP LA V GF AKAG+ PL+SWLP AHP APS S MSG++ K GI G Sbjct: 396 CIGTLSPALAGVVLATFLIGFMAKAGLFPLYSWLPEAHPVAPSSISGPMSGILTKAGILG 455 Query: 258 ILKVAMDLLAQTGLPLW--------WGILVMAIGAISALLGVLYALAEQDIKRLLAWSTV 309 ++K+ + L + G +++A+G I+ LLG + A + DIKRLLA+ST+ Sbjct: 456 MVKLLFGIFGVGALGQFGLFAGLSLPGAVLVALGGITLLLGEVQAYRQTDIKRLLAYSTL 515 Query: 310 ENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTH 369 +G I + +GV T + L G LFH+ NHA+ K +LF GA+I R Sbjct: 516 AQIGEITMVLGVG-----------TSLALAGGLFHVTNHAVMKTMLFFAVGALILRSAGR 564 Query: 370 DMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAG 429 ++ + L K MP+T IG LAI +PP GF+S++ + +V A Sbjct: 565 SLDDLKGLGKVMPFTGLCLGIGLLAIMGVPPFGGFVSKFLMIYACVEAGQVGVAA----- 619 Query: 430 PIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIA 489 ++ V + + + ++ F + E P TM +A+ LA + V Sbjct: 620 -----VILVGSVIGALYYARVLRAVFF---EPYTGPKVVEAPLTMRIALGALAGVVVFTG 671 Query: 490 LSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLP 545 + +M + + +A AL P + + ++ + + +L Sbjct: 672 VYPDAALSVVMPVVETLSARGGLPLA---ALPPLRMEWSLAALIAVVGAVVVYILG 724 Score = 262 bits (669), Expect = 4e-68, Method: Composition-based stats. Identities = 151/598 (25%), Positives = 256/598 (42%), Gaps = 48/598 (8%) Query: 22 LFLLGLDRLAIKLSGITSLVGGVIGIISGI-TQLHAGVTLVARFAPPFEFADL-TLRMDS 79 L L R+ L+ + ++VG V+ I G + + AG VA A + + R D Sbjct: 696 LAALPPLRMEWSLAALIAVVGAVVVYILGKRSTVVAGSLSVAVMALALAGILIQSGRYDL 755 Query: 80 LSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIV 139 LS + +I ++ + LYS+ YM G FF + I ++ + D+ F F Sbjct: 756 LSFWFAALIVVVGAINLLYSIGYMAH--GHAQNRFFFFFVMMIGGLLGVTASDDLFNFFA 813 Query: 140 LFEMMS-LSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASF- 197 +E+MS + + ++I + K S++ G YF G+ + + ++ ++G+ + A Sbjct: 814 FWEVMSSWTLYLVIIHEETKDSLDEGTKYFIFNFVGASFLFLGVAILAAKAGTFEMALLP 873 Query: 198 -RTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIF 256 LS+ G + L G KA +PL AP+ S +S V++K+G + Sbjct: 874 QAALSMPVGWLAVSAGLILAGLLMKAAQLPLRIDYQMHPAPAPTPVSGYISAVLLKVGPY 933 Query: 257 GILKVAMDLLAQTGLPLWWG---------ILVMAIGAISALLGVLYALAEQDIKRLLAWS 307 G+LK+ + L A GL G ++V I A++ L A+ + +KRLL +S Sbjct: 934 GVLKIMVALGAGGGLARIAGLGAWMPDPLVVVQVIAALTVLYAGAMAVVQNGVKRLLIYS 993 Query: 308 TVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLH 367 TV +G + L L + +G+ G L H +NH + K +LFL AG I+++ H Sbjct: 994 TVSQLGYV-----------LLGLSLGSALGVAGGLMHFVNHMMLKDILFLAAGCILAQAH 1042 Query: 368 THDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQL 427 H ++ +G L ++MP T L L++S IPP NGF S+W +Q F Sbjct: 1043 VHSLDDLGGLGRKMPITFGLFLFAGLSLSGIPPFNGFASKWLIYQGAFQGGH-------- 1094 Query: 428 AGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVL 487 + + ++ + +K F G P S A +E P M++ M LLAA V+ Sbjct: 1095 --YLLAMAALMSSLFTLAAVLKFTHSAFLG-PLSPAAATMREAPPVMLIPMGLLAAGSVI 1151 Query: 488 IALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGL 547 + + I I A G PG +H L L LA+ + + Sbjct: 1152 VGVFPGVALVPISRIQAALGLPVIEASWLGGLPGPGGWHP-------LTLTLALGAVGLI 1204 Query: 548 YWLWCRSRRAAFRRTGDAWACGYG--WENAMAPSGNGVMQPLRVVFSALFRLRQQLDP 603 WL+CR R +CG +AM +G+ + + + + + Sbjct: 1205 GWLYCRDGYR-HRAASTTHSCGVSDIAASAMHVPASGLYETPDRLIRKVLFAKTSPEG 1261 Score = 73.0 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 41/220 (18%), Positives = 86/220 (39%), Gaps = 19/220 (8%) Query: 278 LVMAIGAISALLGVLYALAE-QDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVV 336 + GA L+G AL +D+ R+L +ST+ +G +L+ +G+ T Sbjct: 6 ALAWAGAALMLIGEGLALRNVRDLARMLTYSTIAEIGYVLMGLGIG-----------TAA 54 Query: 337 GLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAIS 396 G GA+ HL A+ + L+ + A +I R + ++ + +RMP+ + G ++ Sbjct: 55 GETGAVMHLGYQAIMRALVVVAAWHLIRRSGSSKLDALVGSVERMPFVSLMFGFGLFSVM 114 Query: 397 AIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFC 456 + P G S++ + A+ I + + +CF + Sbjct: 115 GLSPFKGSFSKFVILYAAIENGYWGLAAVGTVASIIAAFYYIHT-IQQVCFQRQSHGILG 173 Query: 457 GAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLA 496 P + + +++LA + V+++L Sbjct: 174 DKPIPFFQIPVGQ------LPIVVLALVTVVMSLDPDPFL 207 >UniRef50_B1VI36 pH adaptation potassium efflux system transmembrane protein n=5 Tax=Actinomycetales RepID=B1VI36_CORU7 Length = 1123 Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats. Identities = 108/483 (22%), Positives = 204/483 (42%), Gaps = 35/483 (7%) Query: 66 PPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASM 125 P L MD+LS F L+ L+ V +YS Y+ + G+ + M F+ ++ Sbjct: 74 PEGGDITFGLTMDALSLFFTLLALLIGAVVFIYSTRYL--HPGEKILSFYLLMTAFMLAV 131 Query: 126 VALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLM 185 + L++ + + +E++SL+S+FL+ R + + G + ++ A +M Sbjct: 132 LLLVLASDVALLFIGWELVSLASFFLIA-RSGSSGEAGATRTLILTFVGGLFLIAALGIM 190 Query: 186 GRESGSLDFASFRT---LSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHA 242 +GS A + L +L +KA +P H WLP A A + Sbjct: 191 VGVTGSTQLADILADPSWGNNTVLTGVTAMLIAMAGFSKAAQIPFHFWLPEAMAADTPVS 250 Query: 243 SALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKR 302 + L + +VK G++ +L+ + + W +++ G ++AL+ LYA+ + D+K+ Sbjct: 251 AFLHAAAVVKAGVYLLLRFSGIFAG----TVIWHYVLIITGMVTALMAALYAMQKTDLKK 306 Query: 303 LLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAI 362 L A+STV +G I+ +GV T + A+ H HALFK LF+ G + Sbjct: 307 LTAYSTVSQLGWIVATIGVG-----------TPFAITAAIVHTAAHALFKSSLFMLVGVV 355 Query: 363 ISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEA 422 + + D ++G+L +RMP+T + ++ +++AIPP GF+S+ + EA Sbjct: 356 DHQAGSRDTRRLGSLWRRMPFTFWSAVVAAGSMAAIPPTLGFVSKEGMLTAF-----QEA 410 Query: 423 VALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLA 482 Q + + + V M + F T E +E P ++ + L Sbjct: 411 PFSQAGVWVLLAVAGVGALATFMYSARYVFGAFV--DGKTDESETREAPVSLWLPAALPG 468 Query: 483 ALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMP 542 L + +W N AT +H P ++ +L++ + Sbjct: 469 LLSLPAVFFLAW-------PESWLDNIALATGVGEAHTHLAMWHGINAPLVISVLVMVLG 521 Query: 543 LLP 545 ++ Sbjct: 522 VIG 524 >UniRef50_Q9PMA7 NADH-quinone oxidoreductase subunit L n=43 Tax=Epsilonproteobacteria RepID=NUOL_CAMJE Length = 596 Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats. Identities = 114/493 (23%), Positives = 198/493 (40%), Gaps = 39/493 (7%) Query: 4 LQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVAR 63 +Q L + F + L + I SL+ + + L Sbjct: 1 MQNLALISLFSPFVAFLFASCFALSEKKQFVGIICSLL-VALSAFCSLYLLFCNEAFNVS 59 Query: 64 FAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIA 123 F + +D++S M+ V+ ++ YS+ YM EG ++ +F+ Sbjct: 60 LFEWFAGVNFGFDIDAISLTMMSVVGIVATCVHFYSIFYMAHDEGFNK--FFAYLGLFVF 117 Query: 124 SMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSIN-AGMLYFFIAHAGSVLIMIAF 182 SM+ L++ DN V +E + L SW L+ + + A F + + +++ Sbjct: 118 SMLFLVMSDNFLGLFVGWEGVGLCSWLLIGFWYKNDTYSFAANEAFIMNRIADLGMLLGI 177 Query: 183 LLMGRESGSLDFASF--RTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPS 240 + ++G+L + SL + F G K+ P H+WL A A P+ Sbjct: 178 FWLYLQAGTLKYDEVFSMAQSLDHNALILIATCLFIGAMGKSAQFPFHTWLADAM-AGPT 236 Query: 241 HASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQD 299 SAL + MV G++ +++ + L ++ +GA A+ AL +D Sbjct: 237 PVSALIHAATMVTAGVYLVIRASTLY----DLVPEVSYIIALLGAFVAIFAASMALVVRD 292 Query: 300 IKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGA 359 +KR++A+ST+ +G + +A G+ G+ ALFHL HA FK LLFLGA Sbjct: 293 LKRIIAYSTLSQLGYMFVAAGLGAYGI--------------ALFHLATHAFFKSLLFLGA 338 Query: 360 GAIISRLHTH-DMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLS 418 G ++ ++ D++KMG L K + TA IG LA++ I P GF S+ F Sbjct: 339 GNVMHAMNDKLDIKKMGGLFKPLKITAILMCIGSLALAGIYPFAGFFSKDLILGYSFISF 398 Query: 419 RVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAM 478 ++L + L ++ + F R H E E ++AM Sbjct: 399 HHG----------IFLVLLIAAFLTAFYSFRLLMLVFFTPAR--HDEHPHEASKIALLAM 446 Query: 479 LLLAALCVLIALS 491 L L ++ Sbjct: 447 SPLMVLAIIAGFF 459 >UniRef50_B2SEW0 NADH dehydrogenase I, L subunit n=25 Tax=Proteobacteria RepID=B2SEW0_FRATM Length = 669 Score = 286 bits (731), Expect = 2e-75, Method: Composition-based stats. Identities = 133/665 (20%), Positives = 268/665 (40%), Gaps = 55/665 (8%) Query: 26 GLDRLAIKLSGITSLVGGVI--GIISGITQLHAGVTLVARFAPPFEFADLTLRMDSLSAF 83 G++ I L G++ ++ ++ G+ SG A + F F D+ ++ ++ + Sbjct: 37 GVNFFTISLCGLSFVLSVILAYGVFSGAEVYSVSFYQWAPISNMFAF-DVGFTVNKITVY 95 Query: 84 MVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEM 143 M+L+++ + + +YS+ YM+ EG A +++ F +M+ L++ +N +E Sbjct: 96 MMLIVTFVSTLVHIYSIGYMKGEEG--YARFFAYISGFTFAMLCLVMGNNFLLLFFGWEG 153 Query: 144 MSLSSWFLVIARQDK-TSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFAS------ 196 + L S+ L+ ++ + A + F + G + ++ + + S+D+ + Sbjct: 154 VGLFSYLLIGFYFNRDKANVASLRAFIVNRIGDLGFLLGIGAVILYTKSVDYTTVFAALP 213 Query: 197 -------FRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASAL-MSG 248 L +S + + L F G K+ PLHSWL + P+ SAL + Sbjct: 214 DIDNTQTIHFLGISFSPVTLMCSLLFIGAMGKSAQFPLHSWLEGSM-EGPTPISALIHAA 272 Query: 249 VMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWST 308 MV G+F + +++ + + V+ IGAI+ L L A+ + DIKR++A+ T Sbjct: 273 TMVTAGVFMVARLSPMFVLSPAALSF----VLIIGAITCLFMGLIAIVQTDIKRVIAYCT 328 Query: 309 VENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLH- 367 + +G +++A G +FHL+ HA+FK LLFL AG++I +H Sbjct: 329 LSQLGYMMVAQGAG--------------AFSIGMFHLMTHAMFKALLFLAAGSVIVAMHH 374 Query: 368 THDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQL 427 D+ +MG L K MP T LIG A++A+PP +GF S+ ++ Sbjct: 375 EQDIRRMGGLRKYMPVTYLCMLIGAWALAALPPFSGFFSKDLIIEAA-------QATTVY 427 Query: 428 AGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQ--EVPNTMIVAMLLLAALC 485 A M+ + +M+ + F G R + E + E P ++++ ++LLA Sbjct: 428 GHEFAYYMVLACAFVTSFYIFRMFFLVFHGKERMSDEERSHLKESPFSILIPLILLAIPS 487 Query: 486 VLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLP 545 V + + + + F NT + +G+ T H P+++ + + Sbjct: 488 VFVGEY--FFSSILSQEHGLFGNTITPFIQAGLGWESVTAHLANEPAIVSSMAFIKHSVT 545 Query: 546 GLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTL 605 L + W W + + + + + + D Sbjct: 546 TLPF-WLAFSALVLAYVLYVWL---PAIPRLFANAKSGFGIIYHILVKKYFIDALYDVIF 601 Query: 606 RLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVV 665 D+ V+ + + +Q G Y ++ +++ Sbjct: 602 VNIFLAISNFLWKVVDIFIIDKTVVNGTSNLIYHTGDSFRKIQRGYLFDYAFVMMVGVLL 661 Query: 666 LLIAI 670 +I + Sbjct: 662 FMILL 666 >UniRef50_D0LWA1 NADH/Ubiquinone/plastoquinone (Complex I) n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LWA1_HALO1 Length = 827 Score = 285 bits (730), Expect = 4e-75, Method: Composition-based stats. Identities = 127/498 (25%), Positives = 226/498 (45%), Gaps = 44/498 (8%) Query: 73 LTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMD 132 + R+D L+ ++I+ + + +Y+ Y+ E+ +G F +F+A+M+ ++V D Sbjct: 74 VAFRLDGLALLFAVLITGIGALVLIYAGGYLGEHPRRGTFFASLF--LFMAAMLGIVVSD 131 Query: 133 NAFWFIVLFEMMSLSSWFLVIAR-QDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGS 191 +A V +E+ S++S+ L+ Q + A I AG + +++ +L+ + Sbjct: 132 DAIALFVFWELTSVASFLLIGFEDQRPEARVAARKALLITGAGGMALLVGLVLLAHAAMD 191 Query: 192 LDFASFRTLSLS---------PGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHA 242 L +S +S L + LL G K+ +P H WLP A AAP+ Sbjct: 192 LGLSSADATRISRLSEVPLREHPLYTPALLLVLLGAFTKSAQVPFHIWLPAAM-AAPTPV 250 Query: 243 SA-LMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIK 301 SA L S MVK G+F + +++ L G L W ++ G ++ L+ A+ ++D+K Sbjct: 251 SAYLHSATMVKAGVFLLARLSPAL----GGTLLWQGSLITAGVLTMLVAGYLAVRQRDLK 306 Query: 302 RLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGA 361 R+LA+STV +GI+++ +G+ + A+ L+ HAL+K LF+ AG Sbjct: 307 RILAYSTVAVLGILVMLLGIGDRH-----------AVEAAIVFLVAHALYKAALFMVAGN 355 Query: 362 IISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVE 421 I T D+ ++G L + MP T AA L+ L+ + PP+ GF+ + + S + + Sbjct: 356 IDHGTGTRDVGRLGGLRRAMPLTCAAALLAALSKAGAPPMFGFLGKELLYGSRLTRDDLS 415 Query: 422 AVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLL 481 A+ + A + + ++A + V F R E+P +M + LL Sbjct: 416 ALLIAAAVAVNITLVAAAFLVGVRPFF---------GSRRETPHAPHEMPPSMWLGPALL 466 Query: 482 AALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAM 541 AA + L A + A A PA V + +H +LL+L L A+ Sbjct: 467 AAGGIFAGLVPGPFAHTLGSSAVAAITGQPARVELAL------WHGVNPEALLILGLSAL 520 Query: 542 PLLPGLYWLWCRSRRAAF 559 L G+ +RR Sbjct: 521 TLGVGVLVYRAVARRTRR 538 >UniRef50_B4RCL7 NADH dehydrogenase I, L subunit n=9 Tax=Proteobacteria RepID=B4RCL7_PHEZH Length = 738 Score = 285 bits (729), Expect = 5e-75, Method: Composition-based stats. Identities = 149/756 (19%), Positives = 254/756 (33%), Gaps = 116/756 (15%) Query: 1 MDALQLLTWSLILYLFASLASLFLLGLDRLAIKLS---GITSLVGGVIGIISGITQLHAG 57 MD L++ L L ++ + + + G+ L + ++ G Sbjct: 1 MDPKVLVSIILFGPLVGAIVAGLFGRAIPSKVSQAVTTGLLFLSAALSWVVFGQWTWGGL 60 Query: 58 VTLVARFAPPFEFADL----TLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAA 113 +AP D + R+D LSA M++V++ + + LYS YM E K Sbjct: 61 EPFTLTYAPFIHVGDFVSNWSFRLDGLSAVMLVVVTSVSSLVHLYSWGYMAEDPHK--PR 118 Query: 114 MGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAG-MLYFFIAH 172 ++++F +M+AL+ + +E + L+S+ L+ K + NA + F + Sbjct: 119 FFAYLSLFTFAMLALISAADFMQLFFGWEGVGLASYLLIGFWFKKPTANAASIKAFVVNR 178 Query: 173 AGSVLIMIAFLLMGRESGSLDFA------------SFRTLSLSPGLASAVFLLAFFGFGA 220 G + + + GS+ FA ++ + L L F G Sbjct: 179 VGDFGFALGIMTVFWAFGSIQFAEIFPQMQAAAGRAWSFIGYDWNLVDLACALLFVGAMG 238 Query: 221 KAGMMPLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILV 279 K+ LH+WLP A P+ SAL + MV G++ + L +V Sbjct: 239 KSAQFFLHTWLPDAM-EGPTPVSALIHAATMVTAGVYMVC----LLSPMFEYAPVAKNIV 293 Query: 280 MAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLL 339 IGA++AL L + DIKR++A+ST +G + A GV Sbjct: 294 TVIGAVTALFAATVGLTQNDIKRVIAYSTCSQLGYMFFAAGVG--------------AYQ 339 Query: 340 GALFHLLNHALFKGLLFLGAGAIISRL-HTHDMEKMGALAKRMPWTAAACLIGCLAIS-- 396 A+FHL HA FK LLFLGAG++I + H DM + G L K +P T A IG +AI+ Sbjct: 340 AAMFHLFTHAFFKALLFLGAGSVIHGMAHEQDMRRYGGLVKYLPVTYAVMTIGTIAITGL 399 Query: 397 AIP----PLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYG 452 IP GF S+ + + A G A V+ GL ++ Sbjct: 400 GIPGVELGFAGFYSKDAIIHAAYEAGG----AGHPMGYFAFVIGIFVAGLTAFYSWRLAF 455 Query: 453 ITFCGAPRSTHAE----------------------------------------------- 465 TF G+ R T + Sbjct: 456 FTFNGSARWTSEDLEHHWHNRDHAHDGHDDHATAAQIETHDEPLADDAGHGHGHGHGHGP 515 Query: 466 -EAQEVPNTMIVAMLLLAALCVLIALS--ASWLAPKIMHIAHAFTNTPPATVASGIALVP 522 E P +M + ++LLA V ++ ++ P + Sbjct: 516 HLPHESPWSMRLPLILLAIGAVFAGIAFHHQFIGDHKAEFWKGAIYNAPVEAHAAAPAAH 575 Query: 523 GTFHTQVTPSLLLLLLLAMPLLP-----------GLYWLWCRSRRAAFRRTGDAWACGYG 571 + + A P+ + +W + A+ Y Sbjct: 576 AEAAADHAAASEVASTAAGPMPGEDHDTAEAHHAPTWVIWAPLVASVLGLLVAAYM--YL 633 Query: 572 WENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIR 631 + + PL F + + D + D Sbjct: 634 LKEGLGARLAARGGPLYTFFYNKWFFDELYDAVFVRGAKFLGDLFWKGGDQKIIDGLGPD 693 Query: 632 PIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLL 667 + + + ++ K LQ+G Y ++ + LL Sbjct: 694 GVSALSVQVGKGAGRLQTGYVYHYAFVMLLGVAGLL 729 >UniRef50_C3PH86 pH adaptation potassium efflux system transmembrane protein n=7 Tax=Corynebacterium RepID=C3PH86_CORA7 Length = 993 Score = 284 bits (728), Expect = 6e-75, Method: Composition-based stats. Identities = 120/535 (22%), Positives = 219/535 (40%), Gaps = 32/535 (5%) Query: 29 RLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAPPFEFADLTLRMDSLSAFMVLVI 88 LA +L+ ++ +L VT V P +L R D+L F ++ Sbjct: 31 PLAGIFIVAAALLAKEFPALARGEELSYSVTWVRDVIAPGVDVNLAFRGDALGIFFAMLA 90 Query: 89 SLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSS 148 ++ V YS Y+ + GKG + M F S++ L++ ++ + +E++SL+S Sbjct: 91 LVIGAVVFTYSAAYLPK--GKGNVSFYVLMTAFTLSILLLVLANDVVVLFLAWELVSLAS 148 Query: 149 WFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRTLSL---SPG 205 + L+ R K+ + G + ++ + +G+ + G Sbjct: 149 FMLIA-RSGKSGEAGSQRTLILTFIGGLTLLSGVAIAATAAGTTSLEGILASDVWAERTG 207 Query: 206 LASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDL 265 L + V +L K+ P H WLP A AA ++ L + +VK G++ +++ + Sbjct: 208 LTAGVAILIAVSAFTKSAQFPFHFWLPEAMAAATPVSAFLHAAAVVKAGVYLLIRFSTIF 267 Query: 266 LAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVG 325 W L++ G +A++ ++A+ + D+K+L A+STV ++G I+ +GV Sbjct: 268 HDVAA----WNWLLIVAGMGTAVMSAVFAVQKTDLKKLTAYSTVSHLGWIVATIGVG--- 320 Query: 326 LSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTA 385 T + AL H L HALFK +F+ G I + D+ ++G L +MPWT Sbjct: 321 --------TPFAIAAALVHTLAHALFKSSIFMLIGVIDHEAGSRDIRRLGVLWNKMPWTF 372 Query: 386 AACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVM 445 + LIG +++A+PPL GF+S+ + EA + +++ V Sbjct: 373 GSMLIGAASMAAVPPLFGFVSKEGMLTAF-----EEAPIGSTGQALLLIVAGVGAFFTFT 427 Query: 446 CFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHA 505 K+ F PR+ E P + + L + V I L + +I A Sbjct: 428 YSAKIIFGAFFDGPRNMS--HVHEAPVRLWLPAALPGVMSVPIIFVMGALDKPLDNIVAA 485 Query: 506 FTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFR 560 S +AL G + ++L+ + G W R+ R Sbjct: 486 IG----MEGHSHLALWHGLNVPLLISVVVLIAGIVALFFRGPLWTAMEERQLLPR 536 >UniRef50_C0XU58 CPA3 family monovalent cation (K+ or Na+):proton (H+) antiporter-3, MnhA subunit n=1 Tax=Corynebacterium lipophiloflavum DSM 44291 RepID=C0XU58_9CORY Length = 954 Score = 284 bits (727), Expect = 8e-75, Method: Composition-based stats. Identities = 130/541 (24%), Positives = 220/541 (40%), Gaps = 39/541 (7%) Query: 12 ILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAPPFEFA 71 +L LA L R A + + L VIG ++ ++ P Sbjct: 8 VLGATVVLAPFVGRVLGRNAGWMLALPLLGAAVIGALAYVSPSAGDAHAETVAWIPSLNV 67 Query: 72 DLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVM 131 D LR+D LS ++++ L+ YS Y+ + + M F A+M L++ Sbjct: 68 DFALRIDGLSIVFLMLVLLIGAGVLAYSTRYL----HQSKPSFYLLMCGFAAAMSTLVLT 123 Query: 132 DNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGS 191 DN F + +EM +L S+FL+ + + + G +L++ A ++M +GS Sbjct: 124 DNLVVFYIAWEMTTLCSFFLIA-NGGEKGYAPAIRTLLVTVGGGLLLLTATVIMCITTGS 182 Query: 192 LDFASF---RTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSG 248 + T + PGL + V LL K+ P +WLP + A ++ L + Sbjct: 183 TQLSVVLADETWTQRPGLTTLVALLVAGAAFTKSAQFPFQAWLPDSMVAIAPVSAYLHAA 242 Query: 249 VMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWST 308 MVK GI+ IL+ + A W I ++ G I++L G + A+ + D+K LLA+ST Sbjct: 243 AMVKAGIYLILRYSPMFAAVDA----WHIALVTAGLITSLFGAMTAVKQSDLKALLAYST 298 Query: 309 VENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHT 368 + +G+++ VG+ T L A+ H + HA+FK LF+ G + T Sbjct: 299 MSQLGLLVAVVGIG-----------TQEALTAAIVHTIAHAVFKAALFMSIGIVEHETGT 347 Query: 369 HDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLA 428 + ++ L RMP T A +I +++ +PPL GF+S+ + S EA+ + Sbjct: 348 RNFHELRNLRVRMPVTQAIVVISAASMAGLPPLAGFVSKEMLLAAGLSAPHKEALVTLVT 407 Query: 429 GPIAMVMLAVTGGLAVMCFVKMYGITFCGAPR---STHAEEAQEVPNTMIVAMLLLAALC 485 G I VT + Y + G R S ++ E + +LAA Sbjct: 408 GGIV-----VTSIFTFAYSYR-YVLGVLGDRRNQLSGTSKTVGEASPSFFAVPAILAAAT 461 Query: 486 VLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLP 545 V I + L + A T +H P L L++A + Sbjct: 462 VAIGIYPHMLNGPVADAVLATTGEFEDP-------HLALWHGLNLPLALSALVIACGAVL 514 Query: 546 G 546 Sbjct: 515 A 515 >UniRef50_D1JBE3 Putative NADH-quinone oxidoreductase, subunit M n=1 Tax=uncultured archaeon RepID=D1JBE3_9ARCH Length = 606 Score = 284 bits (726), Expect = 9e-75, Method: Composition-based stats. Identities = 128/511 (25%), Positives = 221/511 (43%), Gaps = 44/511 (8%) Query: 12 ILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAPPFEFA 71 +YLF + L G + A L + + VI +++ G + F Sbjct: 9 FVYLFGAFLVPLLKGKVKQAYVL--LLPAIAFVILLLTSKGVFGEG----PFWQISFMGY 62 Query: 72 DLTL-RMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLV 130 +LTL R+D LS V + LY++ ++ A ++I S + ++ Sbjct: 63 ELTLGRIDPLSMVFAYVFVIASFCMFLYAIHIKENWQHVAA-------LLYIGSTLGVVF 115 Query: 131 MDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESG 190 + F +E+M+ +S F+V + K++ AG Y + G V ++ L+ G Sbjct: 116 AGDLFTLFFFWEIMAWASLFIVWYGKTKSAFGAGFRYIMVHSFGGVCLLAGVLIHLHNGG 175 Query: 191 SLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVM 250 S+ F SF G L F F A + PL +WL A+P A + ++ Sbjct: 176 SIAFDSFTW---GIGSEYLGVYLIFLAFIINAAVPPLGAWLADAYPEASVTGAVFLTAFT 232 Query: 251 VKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVE 310 K I+ +L+ + +++ +GAI AL GV++A+ E DI+RLLA+ + Sbjct: 233 TKSAIYVLLRGFPGV-----------EILIWLGAIMALYGVVFAVLENDIRRLLAYHIIS 281 Query: 311 NVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHD 370 VG ++ VG+ + G + + + + GA H H L+K +LF+G GA+I Sbjct: 282 QVGYMVAGVGMGVFGTAAGN-----MAINGATAHAFCHILYKAVLFMGMGAVIEVTGRRK 336 Query: 371 MEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGP 430 + ++G + K MP T +IG +IS P NGFIS+ Q+ A+ Sbjct: 337 LTELGGIYKYMPITFWLYMIGAFSISGFPLFNGFISKTMVVQA---------SAMWGYAS 387 Query: 431 IAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIAL 490 I +++ + G + +K+ + R T EA+E P M+ AM + A LC L+ + Sbjct: 388 IWLMLELASVGTFLHTGLKLPWGVWF--ARDTPVCEAREPPWNMLAAMGIAAFLCTLLGV 445 Query: 491 SASWLAPKIMHIAHAFTNTPPATVASGIALV 521 + L + + H P +A LV Sbjct: 446 YPAILYNILPYTVHYEPYAPGHVIAMSQLLV 476 >UniRef50_Q9HJK6 NADH dehydrogenase, chain L related protein n=6 Tax=Thermoplasmatales RepID=Q9HJK6_THEAC Length = 635 Score = 284 bits (726), Expect = 9e-75, Method: Composition-based stats. Identities = 123/666 (18%), Positives = 252/666 (37%), Gaps = 68/666 (10%) Query: 6 LLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFA 65 + W + + ++G + + + I S IT + Sbjct: 5 IYGWMIFISPLIGFLLTLIIGKYYRRWSGAIASFFIFLAF-IFSVITYFTVIKHPIYNSY 63 Query: 66 PPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASM 125 F D + +D+L+ M +++S + ++ L+++ YM++ K +F A M Sbjct: 64 TWFYNIDFGIYIDNLAIVMAMMVSFVSLMIHLFAIYYMKDDPNK--HVYFAETALFTAGM 121 Query: 126 VALLVMDNAFWFIVLFEMMSLSSWFLVIARQ-DKTSINAGMLYFFIAHAGSVLIMIAFLL 184 + L++ N + +E++ L S+ L+ + A F + G + +I + Sbjct: 122 LGLVISSNLVLLFLFWELVGLCSYLLIGFWFFKPNATAAAKKAFIVTRVGDLSFIIGMSI 181 Query: 185 MGRESGSLDFASFR-----------TLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPR 233 + ++ +++ + + K+ PLH W+P Sbjct: 182 LYYSLINVTKDPLSIPYLISNASSIAVAIGKVRLGIIAIFILGAAIGKSAQFPLHVWIPD 241 Query: 234 AHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLY 293 A + ++ + + MV G++ + ++ L ++ V +G+ +AL + Sbjct: 242 AMEGPTTVSALIHAATMVTAGVYLVARLFQVFLYAAPFAMY---AVAIVGSFTALYAGIV 298 Query: 294 ALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKG 353 L D+KR+LA+ST+ +G +L A+G+A P++ V + +FHL++HA+FK Sbjct: 299 GLVVNDVKRILAYSTISQLGYMLAAIGLA--------PIIGGVAVSLGMFHLISHAIFKA 350 Query: 354 LLFLGAGAIISRL-HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQ 412 LLF+ AGA + + D ++MG L KRMP T IG LA+ A P +G+ S+ Sbjct: 351 LLFMSAGAFLVAMMDLRDAKQMGGLWKRMPVTTTLFFIGSLALVAFPGTSGYFSKDPII- 409 Query: 413 SLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPN 472 F+ +L +AG + ++ L L + +M+ + G PRST AE A++ P Sbjct: 410 --FASYNYFTKSLSVAGFLPLLFLMTGSLLTTLYTFRMFFLVAVGKPRSTLAERARDPPI 467 Query: 473 TMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPS 532 ++ +++L+ +++ + + V + L P + P Sbjct: 468 VALLPLMVLSIFALILGVWQVPFY---------------SFVKPTLDLSPYSVSVPTAPI 512 Query: 533 LLLLL-LLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVF 591 + L ++ + + + + W + Sbjct: 513 YITTLPIILLAIGFFVDLYIYGFEKWKTWDISKTW--------------------YYKLV 552 Query: 592 SALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGD 651 F + + L A + + + + S T + LQSG Sbjct: 553 KNKFYIDVLYTRIISERVILPLSAAFSGFENAYNGS--VNKLGSDTVSTGTYFRRLQSGV 610 Query: 652 FRLYCL 657 F Y Sbjct: 611 FENYVA 616 >UniRef50_Q4UWA7 NADH-ubiquinone oxidoreductase NQO12 subunit n=52 Tax=cellular organisms RepID=Q4UWA7_XANC8 Length = 727 Score = 284 bits (726), Expect = 1e-74, Method: Composition-based stats. Identities = 133/669 (19%), Positives = 244/669 (36%), Gaps = 96/669 (14%) Query: 71 ADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLV 130 A + +D L+A M++V++ + ++ +Y++ YM E G ++++F SM+ L++ Sbjct: 81 AHVGFMVDRLTAMMMVVVTFVSLLVHIYTIGYMEEDPG--YQRFFSYISLFTFSMLTLVM 138 Query: 131 MDNAFWFIVLFEMMSLSSWFLVIAR-QDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRES 189 +N +E + L S+ L+ + T++ A M F + G ++ + Sbjct: 139 SNNFLQLFFGWEAVGLVSYLLIGFWFKRPTAVFANMKAFLVNRVGDFGFILGIAGVLLWF 198 Query: 190 GSLDFASFRTLSLSPG-------------LASAVFLLAFFGFGAKAGMMPLHSWLPRAHP 236 GSLD+++ + + + + + + F G K+ +PLH WLP + Sbjct: 199 GSLDYSTVFANATTMAGAKVQLFAGHEWSVMTLICICLFIGAMGKSAQVPLHVWLPDSM- 257 Query: 237 AAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYAL 295 P+ SAL + MV GIF + +++ L ++ IGA +A L + Sbjct: 258 EGPTPISALIHAATMVTAGIFMVARMSPLF----ELSETALNFILFIGATTAFFTGLIGI 313 Query: 296 AEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLL 355 + DIKR++A+ST+ +G + +A+GV+ A+FHL+ HA FK LL Sbjct: 314 VQNDIKRVVAYSTLSQLGYMTVALGVS--------------AYSAAVFHLMTHAFFKALL 359 Query: 356 FLGAGAIISRL-HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSL 414 FL AG++I + H DM KMG L K M T +IG LA+ P +GF S+ ++ Sbjct: 360 FLAAGSVIIGMHHEQDMRKMGGLRKYMKVTYWTSVIGTLALVGTPFFSGFYSKDTIIEAA 419 Query: 415 FSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPR-------------- 460 + + G A++ + + ++ +TF G R Sbjct: 420 AHHAHESHSWIATYGYWAVLGGVL---VTSFYSFRLLFLTFHGKERFRDAHAHDVHAHHD 476 Query: 461 -------------------------------------STHAEEAQEVPNTMIVAMLLLAA 483 + E E + + ++LLA Sbjct: 477 SAHTDAEAQVHTHDSHGHDAHDAHGHDDHGHGHGHHGAHEPHEPHESKWVVTLPLILLAI 536 Query: 484 LCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPL 543 V I + P + + A ++ G + L Sbjct: 537 PSVAIGFFT--IGPMLFGTDWQGHHAAHAMKGQAVSFFTGIVDFYDPARDTVGALAEEFH 594 Query: 544 LPGLYWLWCRSRRAAFRRTGDAWACG--YGWENAMAPSGNGVMQPLRVVFSALFRLRQQL 601 P + L F Y W+ +A P+ + + + Sbjct: 595 GPVAFALHGMMAAPFFLTVAGLLLAALFYLWKPELATKSRKAFAPIVWLLENKYGFDKLW 654 Query: 602 DPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVA 661 + +RA T D + A ++ QSG Y ++ Sbjct: 655 INGFAGGGVVLGKASRAIDT-HVVDGVAVNGSARLIDLAAHLLRRTQSGFLYHYAFAMII 713 Query: 662 ALVVLLIAI 670 L+ LL + Sbjct: 714 GLIALLAVL 722 >UniRef50_B3QPF9 NADH dehydrogenase (Quinone) n=1 Tax=Chlorobaculum parvum NCIB 8327 RepID=B3QPF9_CHLP8 Length = 774 Score = 284 bits (726), Expect = 1e-74, Method: Composition-based stats. Identities = 137/572 (23%), Positives = 251/572 (43%), Gaps = 36/572 (6%) Query: 1 MDALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTL 60 M L LL + + +++A +L L + G+ + + Q+ +GV + Sbjct: 1 MRNLSLLFLIITGFAVSAIAP-YLYRLLKARFVWFGVAFPLTLFASFMLKYPQVASGVPV 59 Query: 61 VARFAP-PFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMN 119 R++ P +L+ +D LS V++++L+ LY+ Y+R YE A F+ Sbjct: 60 RERWSWVPSLGLNLSFVLDGLSLTFVMLVTLIGAAVFLYASVYLRHYEE--ADRFFGFIG 117 Query: 120 IFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINA-GMLYFFIAHAGSVLI 178 +F+ SM+ +++ DN + +E+ S+SS+ L+ + A + + AG + + Sbjct: 118 MFMTSMLGVVLADNMLLLFLFWELTSISSFLLIGFNHHAPTSRASALKALLVTGAGGLAL 177 Query: 179 MIAFLLMGRESGSLDFASFRTLS---LSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAH 235 + LL+G +GS + +SF ++ S L A+ L G K+ P H WLP A Sbjct: 178 LAGMLLLGSVTGSFEISSFYAMNDLITSHRLYPAIVALILVGAFTKSAQFPFHFWLPDAM 237 Query: 236 PAAPSHASA-LMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYA 294 AAPS SA L S MVK GI+ I + ++ G W ++ GA + + L + Sbjct: 238 -AAPSPVSAYLHSATMVKAGIYLIARFNHEI----GGTALWQDTILVAGATTMIFAGLLS 292 Query: 295 LAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGL 354 + D+KRLLA+ST+ +G +++ +G+ + + + +L+ H+L+KG Sbjct: 293 YRQSDLKRLLAYSTLSVLGTLVMLLGIG-----------SKLAIKAFFIYLIAHSLYKGT 341 Query: 355 LFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSL 414 LFL AG + T D+ K+G L K MP TA + ++ + PL GFI + ++++ Sbjct: 342 LFLVAGTLDHETGTRDVSKLGGLWKAMPVTAVTAALASFSMMGVIPLIGFIGKETLYKAV 401 Query: 415 FSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTM 474 + G + +V+ L V+ + F G PR ++ E P M Sbjct: 402 LEVQPW--------GRVLIVLAVAASALLVVVTFLVGFRPFLGKPRPE-LQKVHEAPVAM 452 Query: 475 IVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLL 534 +V +LA +L+ L + ++ + + + I L G + + Sbjct: 453 LVGPFILALSGLLLGLFPDFFVGHLLE--ESAVSIISQRLDIEIELWHGFNLVLLLSFVT 510 Query: 535 LLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAW 566 LL + + LL + + W Sbjct: 511 LLAGVGLYLLRSIALSRIENLHLPGLVKPSIW 542 >UniRef50_Q28L00 NADH dehydrogenase (Quinone) n=1 Tax=Jannaschia sp. CCS1 RepID=Q28L00_JANSC Length = 782 Score = 284 bits (726), Expect = 1e-74, Method: Composition-based stats. Identities = 103/485 (21%), Positives = 206/485 (42%), Gaps = 34/485 (7%) Query: 67 PFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMV 126 P L + +D LS L+I+ + + +LYS Y+ + ++ F+ M+ Sbjct: 52 PSMDVRLEMLIDGLSLTFALLITGIGTLVTLYSTRYLGNHPE--YPRFVLYLLTFMVGML 109 Query: 127 ALLVMDNAFWFIVLFEMMSLSSWFLVIARQD-KTSINAGMLYFFIAHAGSVLIMIAFLLM 185 L++ DN V +E+ ++SS+ L+ D S + + + G + ++ +L+ Sbjct: 110 GLVLADNLIALFVFWEVTTISSYLLIGFTSDSAKSRRSALQALLVTGTGGLALLAGMILL 169 Query: 186 GRESGSLDFASFRTLS---LSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHA 242 G +G+ R + L + +L G K+ P H WLP A AAP+ Sbjct: 170 GAAAGTYSLTEIRGMGDAIRQHDLYIPILILFLAGAFTKSAQFPFHFWLPNAM-AAPTPV 228 Query: 243 SA-LMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIK 301 SA L S MVK G++ + ++ L G W ++ G + + + A+ + DIK Sbjct: 229 SAYLHSATMVKGGVYLMARMNPTL----GGTEPWFWALVIAGGFTTVFASVLAIRQTDIK 284 Query: 302 RLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGA 361 ++LA++T+ +G + L +G + + A+ L+ H+L+K LFL G Sbjct: 285 QVLAYTTLMALGALTLFIGAG-----------SSDAIKAAMLFLVVHSLYKAALFLMIGI 333 Query: 362 IISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVE 421 + ++ T ++ + LA++MP T A + ++++ IPP GFI + + +++ + Sbjct: 334 VDNQTGTREVAHLRGLARKMPITFFAGALAAISMAGIPPFVGFIGKEFLYKAGLEIDTAG 393 Query: 422 AVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLL 481 + +++M G F G ++ E P +M + ++L Sbjct: 394 LWIIGTIFAASVLMFVAAGISVA--------RPFLGRL-PDRFKDTTEGPISMWLGPIIL 444 Query: 482 AALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAM 541 AL + + A P++ + A + V+ + L + + + + Sbjct: 445 GALSLYFGIFAD--IPEVWLVGPATDAVYGSDVSVDLYLFREVNDAFILSLVTFGVGFIL 502 Query: 542 PLLPG 546 LL G Sbjct: 503 YLLHG 507 >UniRef50_C8XH11 NADH/Ubiquinone/plastoquinone (Complex I) n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XH11_NAKMY Length = 956 Score = 283 bits (725), Expect = 1e-74, Method: Composition-based stats. Identities = 123/544 (22%), Positives = 228/544 (41%), Gaps = 35/544 (6%) Query: 24 LLGLDRLAIKLSGITSLVGGVIGIISGITQLHAG-VTLVARFAPPFEFADLTLRMDSLSA 82 L R A+ + + V + ++ G +T R+ P + A + LRMD+L+ Sbjct: 29 CRRLGRGALIVLALLPAATTVWAAAMLPSVMNGGALTSSTRWVPALDLA-IDLRMDALAM 87 Query: 83 FMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFE 142 + L+I+ + ++ LYS Y + G + + F +M+ L+ +N +V +E Sbjct: 88 ALTLIIAFIGMLVLLYSARYFPADDD-GLSKYSGSLVAFAGAMLGLVWANNLILLVVCWE 146 Query: 143 MMSLSSWFLVIAR-QDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRTLS 201 + + S+ L+ R K+S A + AG ++++I +++G +G+ + Sbjct: 147 LTGILSYLLIAHRAGKKSSRTAASQALMVTTAGGLVMLIGAVMLGTLAGTFTISEILAAP 206 Query: 202 LSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKV 261 S L + LL G +K+ ++P WLP A A ++ L + MVK GI+ L+ Sbjct: 207 PSGPLVTVSVLLLIVGGISKSAIVPFQFWLPGAMAAPTPASAYLHAATMVKAGIYLFLR- 265 Query: 262 AMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGV 321 L W +++A+G + L G + AL ++D+K LLA+ TV +G++ L +G Sbjct: 266 ---LAPAFATLPVWQPVLIALGGGTMLFGAVLALRQRDLKLLLAYGTVSQLGLMTLVIGT 322 Query: 322 AMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRM 381 LLG L L+ HA FK LF G I + T D+ K+ L +RM Sbjct: 323 G-----------NPDALLGGLAMLIAHATFKAPLFFTVGIIDTTTGTRDLTKLSGLGRRM 371 Query: 382 PWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGG 441 P A ++ L+++ IPP+ GF ++ + L G +A+V++A+ Sbjct: 372 PLLATLAVLSALSMAGIPPMLGFAAKEADYAGLLEGGT--------GGYVAVVVMALGSA 423 Query: 442 LAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMH 501 + + F + A + M+ + + A+ +++ ++ L P + Sbjct: 424 ITTAYSARFIWGAFAAK-KDVPAADPAPTSAFMVGPTMAMVAIGLVLGIAPGLLEPLLQS 482 Query: 502 IAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRR 561 A T P +A + +L L + W R R R Sbjct: 483 YAQTAGPTHPGAMA-------LWHGWSIPLALSAAGWLIGAAVFLGQRAWERRRDLIARP 535 Query: 562 TGDA 565 + Sbjct: 536 GAEP 539 >UniRef50_A7HGW3 NADH dehydrogenase (Quinone) n=4 Tax=Anaeromyxobacter RepID=A7HGW3_ANADF Length = 670 Score = 283 bits (725), Expect = 1e-74, Method: Composition-based stats. Identities = 193/597 (32%), Positives = 292/597 (48%), Gaps = 15/597 (2%) Query: 68 FEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREY-EGKGAAAMGFFMNIFIASMV 126 L L +D LSA + I L + +++ YMR + + A F N+ +ASM Sbjct: 64 VPNGALALGLDPLSAVFAVAIFALGLAAAVFGAGYMRAHLARRSLGAFLFSFNVLLASMA 123 Query: 127 ALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSIN-AGMLYFFIAHAGSVLIMIAFLLM 185 L+ A FIV +E M++SS+ LV + ++ A Y +H G+ + FL + Sbjct: 124 LLVAARQALLFIVAWEAMTVSSFLLVGLEHEDGAVRMATRTYLVASHLGAAFLFALFLTL 183 Query: 186 GRESGSLDFASFRTLSLSPGL---ASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHA 242 G +GSL F +F L A+ +F A GFG KAG++PLH WLP AHPAAPSH Sbjct: 184 GHAAGSLRFEAFAALGAGARGALPATLLFAFALVGFGTKAGLVPLHVWLPEAHPAAPSHV 243 Query: 243 SALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKR 302 SALMSGV+VK+GI+GIL+ L P+ G+ + A+G + A+ +L AL ++D+KR Sbjct: 244 SALMSGVLVKMGIYGILRALSFLPPA---PVGHGLALAAVGLLGAVAALLLALGQRDLKR 300 Query: 303 LLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAI 362 +LA+STVENVG++ +GV + G + P + +G+ GAL H+ NHAL KGL F+GAGA+ Sbjct: 301 ILAYSTVENVGLVAFGLGVGLAGAAAGAPTVAALGVAGALLHVWNHALMKGLAFMGAGAV 360 Query: 363 ISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEA 422 + T D+E+MG L +RMP +A ++ A++A+PPLNGF+SEW + L R Sbjct: 361 VHGAGTRDVERMGGLLRRMPVSAGLLVLAAAALAALPPLNGFLSEWLLYLGLLDGGRGAT 420 Query: 423 VALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLA 482 L L +A+ +LA+ G LA + F ++ G G+PRS A A E ++ + LLA Sbjct: 421 PGLALLAYLALAVLALVGALAAVVFTRLVGAALLGSPRSAAAAAAHEGGPLLLAPLALLA 480 Query: 483 ALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMP 542 A V +AL + A P A +A +A + + L L +L+A Sbjct: 481 AANVAVALFPGQALALLTPAAALVLRVPEAQLALALAPAVASLEGPLR--LGLAVLVAAG 538 Query: 543 LLPGLYWLWCRSRRAAFRRTGDAWACGY-GWENAMAPSGNGVMQPLRVVFSALFRLRQQL 601 + L +RR R + W CG+ G + + + + + R + Sbjct: 539 VTAHLVSRRLLARRDV--RASETWGCGFVGGSPRVQYTAASLAELALEAMAP--RPLRPT 594 Query: 602 DPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLY 658 A + RV P ++ Q L LY Sbjct: 595 ARVEVPQGVFPRAARFALEADDPARARVFEPAFRRVGEAFGRLRRFQQSRLHLQLLY 651 >UniRef50_Q1IS53 Proton-translocating NADH-quinone oxidoreductase, chain M n=16 Tax=Bacteria RepID=Q1IS53_ACIBL Length = 559 Score = 283 bits (725), Expect = 1e-74, Method: Composition-based stats. Identities = 119/530 (22%), Positives = 227/530 (42%), Gaps = 44/530 (8%) Query: 1 MDALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGI---TQLHAG 57 M +L+ L L ++ L + ++ AI+ + + G + + I + + Sbjct: 1 MFRSHILSIVLFTPLAGAILLLMVPKENKNAIRWIANLAALAGFLVSLPLIPWFWAVKSE 60 Query: 58 VTLVARFA-------PPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKG 110 VT +FA P A L +D +S ++++ +LL + L S T + + Sbjct: 61 VTPYFKFAEGSTNNWIPSIGAGYQLGIDGISFLLIILTTLLGSISILSSWTAIENRVKE- 119 Query: 111 AAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFI 170 + + M+ + + ++ F F V +E M + + L+ + A + +F Sbjct: 120 ---YYAWFLLLQTGMLGVFMANDFFLFFVFWEAMLVPMYLLIGIWGGPRKLYAAIKFFLY 176 Query: 171 AHAGSVLIMIAFLLMGRE----SGSLDFASFRTLSLSPGLAS----AVFLLAFFGFGAKA 222 AGSVL+++ L + +G F+ + +P + +F F GF K Sbjct: 177 TLAGSVLMLLGILFLYFHHHTVTGVYTFSLEALYATAPLITGKAAIFLFFAFFVGFAIKV 236 Query: 223 GMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAI 282 M P H+WLP AH AP+ S +++GV++K+G +G+++ ++ W L++ + Sbjct: 237 PMFPFHTWLPDAHVEAPTAGSVILAGVLLKMGTYGLIRFSLPFFPAVATIKWVQALLITL 296 Query: 283 GAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGAL 342 I L G L +L ++D+K+L+A+S+V ++G L + V T +G+ G++ Sbjct: 297 SLIGILYGALVSLVQKDMKKLVAYSSVSHLGFCTLGIFV-----------FTQMGIAGSV 345 Query: 343 FHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLN 402 +NH + G LFL G + R HT ++ + G ++ MP A LI ++ +P LN Sbjct: 346 IQQINHGISTGALFLIVGILYERRHTREISEYGGISTVMPVYATIALIMFMSSMGLPLLN 405 Query: 403 GFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRST 462 GF+ E + F +++ A+ LA + +Y F G + Sbjct: 406 GFVGEMPIMMATFMVNKTWAIWAIPGVV-----------LAAAYLLWLYQRVFFGTVTNP 454 Query: 463 HAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPA 512 E+ ++ + + L L + I L L + A T A Sbjct: 455 KNEKLADLTPRELATFVPLVILALAIGLYPQPLFKILDQPAAKLEATINA 504 >UniRef50_C8NJU8 NADH ubiquinone oxidoreductase subunit 5 (Chain L)/multisubunit Na+/H+ antiporter, A subunit n=16 Tax=Corynebacterineae RepID=C8NJU8_COREF Length = 1018 Score = 283 bits (725), Expect = 1e-74, Method: Composition-based stats. Identities = 133/551 (24%), Positives = 231/551 (41%), Gaps = 30/551 (5%) Query: 6 LLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVG---GVIGIISGITQLHAGVTLVA 62 +L L L A A L + L R A L + G I G + + L Sbjct: 1 MLILFLALTAAAVFAPLLIRTLGRPAFGLLALVPAAGFFWVAYEFIQGTFRDGGELLLHY 60 Query: 63 RFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFI 122 + P ++T+R+DSL+A L+I + + LY Y G+ +A G + F Sbjct: 61 DWMPSVHL-NITMRLDSLAALFSLIILGVGALVLLYCWGYFDSNPGR-LSAFGGQLVGFA 118 Query: 123 ASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTS-INAGMLYFFIAHAGSVLIMIA 181 +M L++ DN V +E+ S+ S+ LV ++ S + + G + +++ Sbjct: 119 MAMYGLVISDNILLMYVFWEITSVLSFLLVGYYGERASSRRSAGQALMVTTLGGLAMLVG 178 Query: 182 FLLMGRESGSLDFASFRTLS---LSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAA 238 +L+G ++G F+ S LL G +K+ + P H WLP A AA Sbjct: 179 IILIGVQTGVWYFSDVPAFEGNWADVPYISIGALLILAGALSKSAIAPTHFWLPGAM-AA 237 Query: 239 PSHASA-LMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAE 297 P+ SA L S MVK GI+ + ++A D + W ++ + +G + ++ AL + Sbjct: 238 PTPVSAYLHSAAMVKAGIYLVARLAPDFNVVSS----WYLITLPLGIFTMIMSGWMALRQ 293 Query: 298 QDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFL 357 +D+K +LA+ TV +G I+ G+ T LL L +H+LFK LF+ Sbjct: 294 KDLKLILAYGTVSQLGFIISVAGIG-----------TREALLAGLALTFSHSLFKATLFM 342 Query: 358 GAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSL 417 GAI T D+ ++ L +R P A I +++ IPPL GFI++ S+ Sbjct: 343 VVGAIDHTTGTRDINQLSGLWRRQPLMFALAAISAASMAGIPPLFGFIAKETAIDSVLYE 402 Query: 418 SRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPR----STHAEEAQEVPNT 473 + + L ++ T ++ + PR ST E+ V Sbjct: 403 GMLRGMPGNLMLAGIILGSIFTMAYSLYFLYGAFATKRQLFPRNNGVSTAVAESHPVAFK 462 Query: 474 MIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSL 533 + +A +L +L VL+ L + L+ I+ T P +A + + + Sbjct: 463 LWIAPFILTSLTVLLGLFPAPLSAPIVTHLDNVTPGEPTYLALWHGFNLPLALSAIIIVV 522 Query: 534 LLLLLLAMPLL 544 + L +P++ Sbjct: 523 GIALYWKLPVV 533 >UniRef50_A7JYE5 Na(+) H(+) antiporter subunit D n=3 Tax=Vibrio RepID=A7JYE5_VIBSE Length = 498 Score = 283 bits (725), Expect = 1e-74, Method: Composition-based stats. Identities = 112/507 (22%), Positives = 225/507 (44%), Gaps = 30/507 (5%) Query: 6 LLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFA 65 LLT ++L L +L F+ + LSG ++++ V+ + + G+ VA F Sbjct: 5 LLTLPVVLSLSTALTIFFVRRSTKSVEWLSGASAILNLVVAGLLTENIISNGIQAVA-FG 63 Query: 66 PPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASM 125 + D S MV++ +++ +C Y++ + + + ++ +A + Sbjct: 64 QWQAPFGIVFVADYFSVAMVMITAVIGAICVFYAMADL--HRKPSYSNYHALTHVLLAGV 121 Query: 126 VALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLM 185 + + F V FE+M ++S+ L++ KT I+ + Y + +++ ++A L+ Sbjct: 122 YGAFLTGDIFNLYVWFEVMLIASFGLMVLDATKTQIDGAVKYVMLNLISTLVFLLAIGLL 181 Query: 186 GRESGSLDFASFRTLSLSPGLASAVFL--LAFFGFGAKAGMMPLHSWLPRAHPAAPSHAS 243 +G+L+ A T + L+ + L L F F KA + PL +WLP ++ PS Sbjct: 182 YGATGTLNLADLYTKAGESELSINMMLSALFLFAFSIKAALFPLFAWLPASYHTLPSGVV 241 Query: 244 ALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRL 303 AL + ++ K+G++ +++V + W ++ I ++ L GVL A ++ DIK++ Sbjct: 242 ALFAALLTKVGVYALIRVFTLVFPLA--ESGWQPTLIWIAGLTMLTGVLGAASQFDIKKI 299 Query: 304 LAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAII 363 L++ + +G +++ + + T + L GA+F++++H + K LFL G I Sbjct: 300 LSFHIISQIGYMIMGLAI-----------YTPLALAGAIFYIVHHIIVKANLFLIGGFIE 348 Query: 364 SRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAV 423 + + +E +G + K MPW A L+ +++ PPL+GF ++ +S Sbjct: 349 RKYGSSQLEHLGGVYKAMPWLAFLFLVPAFSLAGFPPLSGFWGKFLVIKSSLQAEYYWLA 408 Query: 424 ALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVP--NTMIVAMLLL 481 L + G L V K++ F P E+ +V V + +L Sbjct: 409 GTAL----------LVGLLTVYSMTKIWSEAFWKKPVREKTEQTLQVKVHWLYCVPIAVL 458 Query: 482 AALCVLIALSASWLAPKIMHIAHAFTN 508 ++I L A + A N Sbjct: 459 TMFTLIIGLVAEPFYQFSVQAAEQLLN 485 >UniRef50_D0LZ06 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LZ06_HALO1 Length = 585 Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats. Identities = 108/480 (22%), Positives = 202/480 (42%), Gaps = 29/480 (6%) Query: 36 GITSLVGGVIGIISGITQLHAGVTLVARFAPPFEFAD--LTLRMDSLSAFMVLVISLLVV 93 G + L G+ I G + + P + L +D +S ++V++ + + Sbjct: 38 GFSLLTFGLSLGIFGYFESANAQFQLVIDLPWIDGLGAHFKLGIDGISLWLVVLTTFTMP 97 Query: 94 VCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVI 153 + L S + + K M + M+ V + F F + +E+M + + L+ Sbjct: 98 IVLLSSYSSI----HKREREFVALMLVLELGMLGAFVSLDLFLFYIFWELMLIPMYLLIG 153 Query: 154 ARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMG------RESGSLDFASFRTLSLSPGLA 207 I A + + GS+L++ A + + D + + + LS Sbjct: 154 IWGGNRRIYASIKFVIYTMVGSLLMLAAIFYVYVVHAEVAGFYTTDLEAVQRVLLSRDAQ 213 Query: 208 SAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLA 267 F F K + PLH+WLP AH AP+ S +++GV++K G++G L+ A+ + Sbjct: 214 VWCFAAFALAFAIKVPLFPLHTWLPDAHVQAPTTGSVVLAGVLLKFGVYGFLRFAVPMFP 273 Query: 268 QTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLS 327 + + ++A+ I + G L A A+ D+K+L+A+S+V ++G +L + Sbjct: 274 YGTSVVAPYLAILAVAGI--IYGALVAFAQDDVKKLVAYSSVSHLGFCILGLF------- 324 Query: 328 LHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAA 387 +T G+ G++F +L+H L G LFL G + R HT M + G L +MP A Sbjct: 325 ----SMTARGIEGSIFAMLSHGLTTGGLFLAIGVLYERRHTRRMAEYGGLWAQMPVFAGV 380 Query: 388 CLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCF 447 LI L + +P L+GFI E+ T F+ S A +L G +A + + + F Sbjct: 381 FLICTLGSAGLPGLSGFIGEFLTIFGTFTTSAAYLPAPRLLGALAATGVILGAVYLLFMF 440 Query: 448 VKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFT 507 K+ G +++ +V L + ++ ++ + F Sbjct: 441 QKLM----FGPITRDANRGLRDLSGREMVVFAPLVVMIFVMGVAPQPFLKTMEPSVERFI 496 >UniRef50_D2S7T6 NADH dehydrogenase (Quinone) n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2S7T6_9ACTO Length = 948 Score = 282 bits (723), Expect = 2e-74, Method: Composition-based stats. Identities = 110/437 (25%), Positives = 193/437 (44%), Gaps = 27/437 (6%) Query: 34 LSGITSLVGGVIGIISGITQLHAGVTLVARFAPPFEFADLTLRMDSLSAFMVLVISLLVV 93 L+ + VGG++ + VT + P + LR+D L+ L++ + V Sbjct: 32 LAAGFAGVGGLLATGAPTVLDGGAVTASWTWLPSLQ-VSFALRLDGLAGLFCLIVLGVGV 90 Query: 94 VCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVI 153 + YS YM + G + + +F +M+ L++ + V +E+ ++ S+ L+ Sbjct: 91 LIMAYSPRYMGDSSRNG--VVYGLLTLFAGAMLGLVLAADVVLLYVFWELTTVCSFVLIG 148 Query: 154 ARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASF---RTLSLSPGLASAV 210 + ++ G I AG + +++A +++ G+ D A+ R L+ LA + Sbjct: 149 TAG-QVAVKPGRRALLITAAGGLALLLAVIMLSVVVGTTDLATILAERDQVLASPLAWPI 207 Query: 211 FLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTG 270 L K+ +PLH WLP A A ++ L + MVK GI+ +++ Q Sbjct: 208 GALIATAAFTKSAQLPLHFWLPGAMVAMTPVSAYLHAATMVKAGIYLLMRTTPLFADQPA 267 Query: 271 LPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHD 330 W L++ +G SA+ G AL E D+K +LA STV +G+++ +GV Sbjct: 268 ----WSALLITVGLASAVAGAFMALREHDLKAILAHSTVSQLGLLIAVIGVG-------- 315 Query: 331 PLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLI 390 T V L A+ H HALFK LF+ G I + D+ ++ L + MP TA + Sbjct: 316 ---TPVALAAAMLHTFAHALFKATLFMLVGIIDKETGSRDIRELSGLRRVMPVTATVTGL 372 Query: 391 GCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKM 450 L+++ +PP+ GF+S+ Y +Q L AG +A + L +++ Sbjct: 373 AALSMAGVPPMLGFVSKEYLFQGLLQADFAPW-----AGAVAGALGVTASALTFAYGMRI 427 Query: 451 YGITFCGAPRSTHAEEA 467 F G R E Sbjct: 428 VYGAFGGPTRQPDLYEP 444 >UniRef50_UPI00005100B6 putative monovalent cation/H+ antiporter subunit A n=1 Tax=Brevibacterium linens BL2 RepID=UPI00005100B6 Length = 1024 Score = 282 bits (723), Expect = 2e-74, Method: Composition-based stats. Identities = 111/519 (21%), Positives = 206/519 (39%), Gaps = 30/519 (5%) Query: 6 LLTWSLILYLFASLASLFLLGLDRLAIKL-SGITSLVGGVIGIISGITQLHAGVTLVARF 64 ++ + L + L R + L + + G+ + + + ++ Sbjct: 1 MILTVVALAALIIVTPFITRVLGRASGWLLAAAYLGIAGLFTPTAAEVMAGSTPEVSYQW 60 Query: 65 APPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIAS 124 P F DL LR D + + ++ V +YS Y+ + + M IF S Sbjct: 61 IPAFG-VDLALRADGIGVIFTYIALIIGAVVFVYSTGYLDRGRN---TSFYWLMVIFTFS 116 Query: 125 MVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLL 184 MV L++ ++ V +E+ SL+S+FL+ A + FI G + +++A + Sbjct: 117 MVMLVLSNDLLVLFVCWELTSLASFFLIARSGSPGQAPA-LRTMFITFIGGLSLLVATGV 175 Query: 185 MGRESGSLDFASFRTL---SLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSH 241 + +G+ + + S + S V +L K+ P HSWLP A AA Sbjct: 176 IIAVTGTTNVHEALSSPVWSAQSPVTSLVAVLIAVAAMTKSAQFPFHSWLPDAMAAATPV 235 Query: 242 ASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIK 301 ++ L + +VK GIF +L+ A W L++ G I+A +G +AL + D+K Sbjct: 236 SAYLHAAAVVKAGIFLLLRFTPAFHATPA----WNTLLIVAGLITACIGGWFALNQYDVK 291 Query: 302 RLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGA 361 +L+A+STV +G+I +G+ + + A H++ HALFK LF+ G Sbjct: 292 KLMAYSTVSQLGLITAVIGIG-----------SEAAIAAATLHVIAHALFKSGLFMMVGV 340 Query: 362 IISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVE 421 + T ++ ++ L + P + ++GC ++S IPPL GF+S+ + + Sbjct: 341 VDHLAGTRELTRIPQLMRAAPASFIVMIVGCASMSGIPPLLGFVSKEALFTAFGDTP--- 397 Query: 422 AVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLL 481 G A+++ L K F A P M++A + Sbjct: 398 --GSAWTGWAALLVAVGASVLTFAYCAKTVWGAFIDGKPVDRARLGHGSP-VMLIAAAVP 454 Query: 482 AALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIAL 520 + ++ + I A V + Sbjct: 455 ILASIPLSFALFVFDNPISQAVRAALYESTGPVHLALWH 493 >UniRef50_A9A3Z7 Proton-translocating NADH-quinone oxidoreductase, chain L n=4 Tax=Thaumarchaeota RepID=A9A3Z7_NITMS Length = 692 Score = 282 bits (723), Expect = 2e-74, Method: Composition-based stats. Identities = 143/712 (20%), Positives = 270/712 (37%), Gaps = 75/712 (10%) Query: 2 DALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTL- 60 +A W + + FA+ +L + G+ +++ + +G ++ ++ +S + L + Sbjct: 11 EATSAAAWLVWILPFAA--ALIMPGIGKISKRATGYVAVGFALMSALSAASLLPVAIEAS 68 Query: 61 -VARFAPPFEFADL--TLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFF 117 + E L + D LS M V++ + + +YS YM+ K F+ Sbjct: 69 EIHHQIMWIEAIGLKGGVLADPLSVIMANVVAWISFLIMIYSTGYMKG--DKDITRFWFW 126 Query: 118 MNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTS----------------- 160 M FI SM +++ DN +E + L+S+ L+ Sbjct: 127 MMFFIGSMQIIVLSDNLLQVFFGWEGVGLASYALISFWYRDKKKDHVGQEGRTVLGLLDY 186 Query: 161 ---INAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRT------LSLSPGLASAVF 211 +AGM F + G V+++ LL+ +G+ F + G+ F Sbjct: 187 YAPTHAGMKAFIMTKVGDVMMIAGMLLIFLFAGTFGFKELMGDHEWAIAMNAQGMLVPAF 246 Query: 212 LLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGL 271 +L F G K+ PL+ WL A + ++ + + MVK G+F + ++ + A Sbjct: 247 VLLFGGAIGKSAQFPLNEWLLEAMTGPTAVSALIHAATMVKAGVFLVARIGPIVFALGAA 306 Query: 272 PLW---WGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSL 328 + + +V +GAI+ALL + +IK++LA+ST +G +++A+GVA + Sbjct: 307 GIMADQFFEIVAWVGAITALLLATQGMVNPEIKKVLAYSTGSQIGYMMMALGVAGLSHQY 366 Query: 329 HDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAAC 388 D G FHL++HA+FK LF+ AG+++ + + M MG L K M T A Sbjct: 367 VD------GYTAGFFHLISHAMFKASLFMAAGSLLHIVGSRFMTDMGGLRKHMKKTYAFM 420 Query: 389 LIGCLAISAIPP-LNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCF 447 L + P GF S+ + ++++ A+ L + +T + Sbjct: 421 WAAGLGLMGAPFITTGFWSKDAIFAAVYTSGNEWALPL-------FAIAVLTAIITAFYT 473 Query: 448 VKMYGITFCG------APRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMH 501 +M G+ F G E +M +LA L + I L + H Sbjct: 474 TRMIGMVFFGNKSKHIQKMEEEGHHIHEASLSMWAPYGILAVLTIGIGLIGLSTEHGLHH 533 Query: 502 IAHAFTNTPPAT---VASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAA 558 + + A A + F + P L L+A + GL +++ R Sbjct: 534 MFEVYLEDSFGIHSEHAKAEASILPEFLKGINPVALGASLVAFAIGIGLGYIFYIGRWVD 593 Query: 559 FRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARA 618 + + N + V + + L + + Sbjct: 594 PVKF---------------VNSNIFFYAIHKVILSRWYLNAIVYWCFVIAPLWLARGVFR 638 Query: 619 QSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLIAI 670 + D + AT AK +Q Q+G + Y A L+ +++ + Sbjct: 639 YFEKTAIDYGMNDGFQKATAWGAKVVQGTQTGVSQSYLFVFGAGLLFVVLIL 690 >UniRef50_C0GRM0 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GRM0_9DELT Length = 699 Score = 282 bits (722), Expect = 3e-74, Method: Composition-based stats. Identities = 144/726 (19%), Positives = 264/726 (36%), Gaps = 95/726 (13%) Query: 4 LQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVAR 63 +QL LI L + FL + + + + + L + L Sbjct: 3 IQLAWLCLIFPFIGVLVTPFLARISTSVMNFGAVFFSFLAAVCALMLFPLLFSAEALPLE 62 Query: 64 FAPPFEFADLTLR----MDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMN 119 + +T+ +D LS + V++++ +Y + YM+ G MN Sbjct: 63 SQLVWLHTPITVSFGVLVDPLSIIVANVVAVISFFIMVYCVGYMKGDPG--IMRFWMLMN 120 Query: 120 IFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSIN---------------AG 164 FI SM+ L++ +N + ++++ L S+ L+ G Sbjct: 121 AFIGSMLLLVLANNLIIIFIGWKLVGLCSYGLIGFYYRDEKKYWIGGPEPYSFDTPSACG 180 Query: 165 MLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFR--------TLSLSPGLASAVFLLAFF 216 + F + G +L++ L+M +G+ + ++ +PG+ V +L Sbjct: 181 VKAFIVTSVGDMLMLGGILIMYFYAGTFNVLELYQTAPEWIPEMAATPGMIILVSILLIA 240 Query: 217 GFGAKAGMMPLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLL-----AQTG 270 G K+ PLH WLP A P SAL + MVK G+F I + A Sbjct: 241 GPVGKSAQFPLHEWLPEAMS-GPGPVSALIHAATMVKSGVFLIARFIPIFYYGYWTAGVD 299 Query: 271 LPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHD 330 +++ ++V IGAI+A L L ++K++LA+STV +G ++LA+GVA Sbjct: 300 EAMYFFLIVAWIGAITAFLAASQGLVALELKKILAYSTVSQIGYMMLALGVAGF-----S 354 Query: 331 PLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLI 390 L V G FHL++HA+FK LFL AG +I H+ + MGAL K +P+T + Sbjct: 355 QDLLVKGYAAGTFHLMSHAMFKACLFLCAGTVIHAAHSIYINDMGALRKFLPYTWLFMGL 414 Query: 391 GCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKM 450 L++ +PPL GF S+ + + + +++ V+ + Sbjct: 415 ATLSLIGVPPLPGFWSKEAVLLATLESQHI----------VLFLIVLVSVIFTAFYSTRY 464 Query: 451 YGITFCGA-------PRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIA 503 +G+ F G E A +LAA V+ L M + Sbjct: 465 FGMMFHGKQSRHIKQELKKPHNHVHEGYFPQTFACGVLAAGIVIFGLMG-------MRVE 517 Query: 504 HAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTG 563 +A + +A +L+++L + L+ + R Sbjct: 518 YALYGLFETQLVQDLAHSTVLSVPSFDKTLIMVLSIGSVLIGVIPAYMFYIARK------ 571 Query: 564 DAWACGYGWENAMA-----------PSGNGVMQPL----RVVFSALFRLRQQLDPTLRLN 608 W +EN+ N L + + + ++ +N Sbjct: 572 --WDADAVYENSRVVQLVHAFLWNRWYINAFYNWLFVKGVMGAARAVAEKVEIAVDTAIN 629 Query: 609 KGLAHVTARAQSTEPFWDERVIRPIVSATQR-----LAKEIQHLQSGDFRLYCLYVVAAL 663 + ++D + I + + LQ+G + Y +A + Sbjct: 630 RLTPSGVFGLSGISVWFDRKGIDGFLDGMAYHVQNSAGGTLSRLQNGRIQDYLA--LAVI 687 Query: 664 VVLLIA 669 + LL+ Sbjct: 688 IALLVC 693 >UniRef50_B1I6I5 NADH-quinone oxidoreductase subunit N n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=NUON_DESAP Length = 501 Score = 282 bits (722), Expect = 3e-74, Method: Composition-based stats. Identities = 109/515 (21%), Positives = 216/515 (41%), Gaps = 39/515 (7%) Query: 3 ALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVA 62 + ++ L + + A L + R + + + L G + + + + V+ Sbjct: 6 PILIVIIPLFVAMAARLLVRLSVPFTRGFVLAAALAVLASGAVALAETLVRGEPWRYYVS 65 Query: 63 RFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFI 122 + PP+ + L +D L+ ++++++ + +Y+ Y++ + + + Sbjct: 66 GWPPPW---GIELVIDPLAGGLIVLVAFFGLAALVYAGPYLQGRTPREQGSFYALFLLAK 122 Query: 123 ASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAF 182 A ++ + + F V E+ SL+++ L+ + SI A + Y I A + ++ Sbjct: 123 AGLLGMCATGDLFNLYVFLEISSLAAYALIAF-GGRRSIVAALRYLIIGTAAACFYLLGV 181 Query: 183 LLMGRESGSLDFASFRTL---SLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAP 239 + +GSL+ A L + + + G G K + PLH WLP A+ P Sbjct: 182 GYLYAMTGSLNMADLAVLLPPLMDSPVVILALVFIVAGLGIKMALFPLHGWLPDAYSYTP 241 Query: 240 SHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQD 299 + A M+ VM K+ + + ++ + G ++ + A L G + A+A++D Sbjct: 242 APVLAFMAAVMTKVSAYALYRILYFVTEAAGPVSPTLQVLGWMAAAGILFGSIMAIAQRD 301 Query: 300 IKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGA 359 + R+LA+S+V VG I+L + V V+ L GAL H+L+HAL KG LF A Sbjct: 302 LWRMLAYSSVAQVGYIVLGLAVG-----------NVLALYGALLHVLSHALVKGGLFFIA 350 Query: 360 GAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSR 419 G + + +AK+MP T A + L++ +PP GF S+WY Sbjct: 351 GGVSWETGVRRVSDFVGIAKKMPLTMGAFVAAALSMIGLPPTLGFFSKWYLVLGCLEAGA 410 Query: 420 VEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQ----------- 468 + + +L V+ L + F ++ + A + Sbjct: 411 ----------WVFVAVLVVSSLLTAVYFFRVIENAYLKGLPQPGARAERPVPPGARRFRL 460 Query: 469 EVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIA 503 E+P +M+V +L+L V++ L + ++ A Sbjct: 461 ELPASMLVPILVLGIGVVVLGLFNEQIISNVIQYA 495 >UniRef50_C9N684 Proton-translocating NADH-quinone oxidoreductase, chain L n=17 Tax=Streptomyces RepID=C9N684_9ACTO Length = 666 Score = 282 bits (722), Expect = 3e-74, Method: Composition-based stats. Identities = 141/615 (22%), Positives = 250/615 (40%), Gaps = 43/615 (6%) Query: 71 ADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLV 130 DL L +D + + +++ L+ +YS Y+++ + +++F ++M+ ++ Sbjct: 74 IDLALHLDGFAVLVAVLVGLVATCVQVYSTAYLKD--DARYPSYAALVSLFTSAMLLVVY 131 Query: 131 MDNAFWFIVLFEMMSLSSWFLVIA-RQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRES 189 + +V +E+M + S+FLV + + A + F + G V +I + ++ Sbjct: 132 SGDLMVLLVGWEIMGICSYFLVGHYWETPEARAASLKAFLVTKLGDVPFLIGLFALAADT 191 Query: 190 GSLDFASFRTLSLSPGL--ASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASAL-M 246 G+ + GL + + LL G K+ PLH+WLP A A P+ SAL Sbjct: 192 GTFRITGILAAVNNGGLDHPTLIALLLLAGVAGKSAQFPLHTWLPDAM-AGPTPVSALIH 250 Query: 247 SGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAW 306 + MV GI+ + + LL +++ + A++ + L ALA+ DIKR+LA+ Sbjct: 251 AATMVAAGIYFVAR----LLPVFAASAAALVVLAVMAAVTMIGSGLAALAQDDIKRVLAY 306 Query: 307 STVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRL 366 ST+ +G + A+ V G A+FHLL+H FK +LFL AG +I Sbjct: 307 STIGQLGYMSGALAVGDRG--------------AAVFHLLSHGAFKAVLFLSAGVVIHAA 352 Query: 367 HTHD---MEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVE-A 422 T+ M +M L KR+P + LA++AIPP GF S+ + + + Sbjct: 353 GTNSLAAMSRMSGLTKRIPDAFWTMTVALLALAAIPPFAGFFSKEAVLVAAEHTAFGDRD 412 Query: 423 VALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLA 482 VA AG + +V L +++ + F G R A + P M + +LA Sbjct: 413 VAPAAAGWLVLVAGLTAAVLTAAYATRLWLLAFRG--RGPEAADHGRQPAAMTSVLWVLA 470 Query: 483 ALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMP 542 + L L + + T A +++G+ LV G A Sbjct: 471 VPTIAFGLLTGVLVDWFDGHSLTPSLT-TAVLSTGVGLVGGLVTYGAWRHTT-----AHA 524 Query: 543 LLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFR-LRQQL 601 P + + +A +A + + P R++ L R Sbjct: 525 ERPPVGAVAAHPDAEPALVEAEAITSHTAAYGTIAGAPDP-SDPGRLLLGPLHRHAVTGF 583 Query: 602 DPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKE----IQHLQSGDFRLYCL 657 TA A F D V+ V + +A+ ++ Q+G+ + Y Sbjct: 584 HLDALYTALFVRPTAAAAQLVRFLDREVVDTYVRGSGGIARGLGTLVRRAQTGNVQTYLG 643 Query: 658 YVVAALVVLLIAIAV 672 ++A +VL IA V Sbjct: 644 ALLAGSLVLAIAAVV 658 >UniRef50_D1JBE0 Putative NADH-quinone oxidoreductase, subunit M n=1 Tax=uncultured archaeon RepID=D1JBE0_9ARCH Length = 509 Score = 282 bits (722), Expect = 3e-74, Method: Composition-based stats. Identities = 125/499 (25%), Positives = 241/499 (48%), Gaps = 18/499 (3%) Query: 3 ALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVA 62 L +++ + ++ L + ++ A I ++ ++ I + + T+ Sbjct: 5 VEHLPVLIVVISMLSAFTILIVGWRNKNACPFISIVTIFIQLVMAIFVLNYVLTNGTIYY 64 Query: 63 RFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFI 122 + +D+L+A+++++I L ++C+++S + + A+ +FI Sbjct: 65 WLGGWSPPWGIEYVVDALNAYILVIILFLGLLCAIHSKSSVEHELPGKKASFFTLYQLFI 124 Query: 123 ASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAF 182 + + V + F V E++SLS++ LV ++ TS+ AG Y + G+ +I Sbjct: 125 TGLCGVTVTGDIFNMYVFIEILSLSAYALVGSKGG-TSLRAGFTYLIMGSIGACFFLIGI 183 Query: 183 LLMGRESGSLDFASFRTLSLS---PGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAP 239 + +GSL+ L A F+ G G K + PLH+WLP AHPAAP Sbjct: 184 GFLYSVTGSLNIHDLSLLLPPLYGSKTVQAAFIFITVGMGIKMAIYPLHTWLPDAHPAAP 243 Query: 240 SHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQD 299 S SA++SG+M+ +G + +++V L +G++++ +G +S + L+A + D Sbjct: 244 SPISAMLSGIMIMVGFYALIRVLFTLFP---FYYNYGLILLILGLLSMTVANLFAYFQMD 300 Query: 300 IKRLLAWSTVENVGIILLAVGVAMVGLSLHD----PLLTVVGLLGALFHLLNHALFKGLL 355 +KRL A+S++ NVGII GVA LS+ P + + GAL H+L+H + K L+ Sbjct: 301 LKRLFAYSSIVNVGIITTGAGVAAYILSIEPAGAIPEAASLAMAGALLHILSHGIGKALV 360 Query: 356 FLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLF 415 FLG+G I + +HT D+ KMG +A+ MP+T+ + +G L++ +PPL GF S++ ++ Sbjct: 361 FLGSGNIHASIHTRDLAKMGGIARDMPYTSYSMSVGLLSLLGMPPLIGFWSKFLILMAVA 420 Query: 416 SLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMI 475 + + + I ++ + + K+ I + A E P +M+ Sbjct: 421 MAIQSIGGVVMVMTFIIILFNVIYAATYYLKVAKVLMI-------ESGAARTHEAPFSMV 473 Query: 476 VAMLLLAALCVLIALSASW 494 +++ A C++ L Sbjct: 474 FSVVAFALACLIGGLLLPI 492 >UniRef50_D2R5F8 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R5F8_9PLAN Length = 600 Score = 282 bits (721), Expect = 3e-74, Method: Composition-based stats. Identities = 117/489 (23%), Positives = 211/489 (43%), Gaps = 40/489 (8%) Query: 3 ALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVA 62 L ++ L L ++ L L + A++ + + ++ + A A Sbjct: 1 MTSLFITTVFLPLAGAILMWILAPLGKNAVRFGALGVTLATLVCTAIVVASFPADGAKGA 60 Query: 63 RF----------APPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAA 112 F + +L +D L +M + +LL+V L S ++E E A Sbjct: 61 EFCTVDWPWLAQSGSLLDIRFSLALDGLGLWMFGLSALLMVTAVLVSWEAIKERE----A 116 Query: 113 AMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAH 172 + + + + + F V FE + +FL+ + A +F Sbjct: 117 LFFGMLLLLEFGCLGVFTARDLILFYVFFEFTLIPLFFLIGIWGSEDRKYAASKFFLYTL 176 Query: 173 AGSVLIMIAFLLMGR------ESGSLDF------ASFRTLSLSPGLASAVFLLAFFGFGA 220 AGS+L + L++ G L F A+ R L P AVF+ F GF Sbjct: 177 AGSLLTFLGLLVIVVWCYQQEGVGKLVFSIPELTATLRDAPLPPAWQLAVFIALFAGFAI 236 Query: 221 KAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVM 280 K + PLH+WLP AH AP+ S +++GV++KIG++G L+ ++ +L + ++ Sbjct: 237 KVPLFPLHTWLPLAHVQAPTAGSVILAGVLLKIGVYGFLRFSVPMLPDATVTCMPY--LL 294 Query: 281 AIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLG 340 + I + G L ALA+ D+KRL+A+S+V ++G L + L +G+ G Sbjct: 295 WLSVIGIIYGALVALAQGDMKRLIAYSSVSHLGYCTLGLFA-----------LNPLGVQG 343 Query: 341 ALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPP 400 ++ ++NH L G LF G + R HT +++++G LA++ PW + LI + +P Sbjct: 344 SVLQMVNHGLSTGGLFAVIGMLYERYHTREIKQLGGLARQTPWLSFFMLIFTFSSIGLPG 403 Query: 401 LNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTG-GLAVMCFVKMYGITFCGAP 459 LNGF E+ +F + ++ + + + +LAVTG L + + F G Sbjct: 404 LNGFPGEFMILLGMFQRAWAQSSVENFSQLMTIAVLAVTGVVLGAWYMLWLVQHVFFGPL 463 Query: 460 RSTHAEEAQ 468 + + Sbjct: 464 KEPADDHGH 472 >UniRef50_C0GJ30 NADH dehydrogenase (Quinone) n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJ30_9FIRM Length = 497 Score = 282 bits (721), Expect = 4e-74, Method: Composition-based stats. Identities = 118/507 (23%), Positives = 226/507 (44%), Gaps = 29/507 (5%) Query: 10 SLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAPPFE 69 ++L L A+ R A + + ++V I + G T+ Sbjct: 12 LVLLVLMAAFLMPAFAHFGRKACGPAAVLTMVAAFIYSLHFALITRDGQTIAYSVMGWDA 71 Query: 70 FADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYM-REYEGKGAAAMGFFMNIFIASMVAL 128 + + ++ SAFM+LVIS + +V +YS++ + RE G + + SM+ + Sbjct: 72 PWGIEVIIEPFSAFMLLVISAVCLVIMIYSMSSLGREIPASGIGWYYTTFLLLVGSMMGM 131 Query: 129 LVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRE 188 ++ ++ F V E+ +++ LV+A+ + + A Y +A GS ++ L+ Sbjct: 132 VMTNDLFNMYVFIEVTGIAACALVLAKGGRLATEASFKYLLLATVGSGFVLTGIALIYVI 191 Query: 189 SGSLDFASFRT-----LSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHAS 243 +G+L+ + P L V GFG K+ + PLH WLP AH +AP+ +S Sbjct: 192 TGNLNISFVAAEFALVYPQYPYLIWTVLSFFLVGFGIKSALFPLHVWLPDAHSSAPTTSS 251 Query: 244 ALMSGVMVKIGIFGILKVAMDLLAQTGLP-LWWGILVMAIGAISALLGVLYALAEQDIKR 302 A++SG++VK I + K + L ++ +++ + + L G ++A + D+KR Sbjct: 252 AVLSGLVVKAYIVALAKFYFQIFGFDLLDQIFIRHMILIMATGAILGGSMFAFVQLDLKR 311 Query: 303 LLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAI 362 LA+S+V +G I L +G++ + +GL + H+ NHA+ K LFL AGAI Sbjct: 312 RLAYSSVAQIGYIFLGLGLS-----------SPIGLAAGILHIFNHAVMKACLFLAAGAI 360 Query: 363 ISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEA 422 + + ++ LA +MP T A I L++ +P +GFIS+WY Sbjct: 361 YRQTGEKRVNRLQGLAFQMPITMFAFSIAALSMVGLPLFSGFISKWYLALGSIEAG---- 416 Query: 423 VALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFC-GAPRSTHAEEAQEVPNTMIVAMLLL 481 P+ + ++ ++G L F+ + F + ++P +M V++++L Sbjct: 417 ------MPMFVGLIILSGLLNASYFLPIVWQAFFVVDEQEPKTFTMDKIPVSMSVSLVVL 470 Query: 482 AALCVLIALSASWLAPKIMHIAHAFTN 508 A + ++ + + Sbjct: 471 AMAVIYFGINPEFPLALATKAVGVLLH 497 >UniRef50_B5IUC0 NADH-Ubiquinone/plastoquinone (Complex I), domain protein n=2 Tax=Thermococcus RepID=B5IUC0_9EURY Length = 620 Score = 281 bits (720), Expect = 5e-74, Method: Composition-based stats. Identities = 123/584 (21%), Positives = 251/584 (42%), Gaps = 60/584 (10%) Query: 38 TSLVGGVIGIISGITQLHA-GVTLVARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCS 96 ++G + + I G +++ + ++ ++ ++ Sbjct: 31 LGVIGAALPLAYLIQAYQTLGTQSSIQYSILLAGFKFEFLLYQINWIFAMIAGVVGFAAV 90 Query: 97 LYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQ 156 L ++ R+ + F + + + + + D+ F + +E+M+ S+ +V+ Sbjct: 91 LGMVSTARD------SYEWLFALMSLTGVYGVFLADDLASFFIFWEIMTFGSFMMVLKYN 144 Query: 157 DKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRTLSLSPGLAS-------- 208 K A + YF ++ G+ ++IA ++ + G+LDFA+ + + Sbjct: 145 RK----ASLKYFLLSVFGAYAMLIAIGIIYAKVGALDFATIQQAFYQDAMRGTFGADTLF 200 Query: 209 ------AVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVA 262 VF L FG KAGM PLH W P A+ +A+ SGV+ K G++G+L + Sbjct: 201 SRNDMLLVFGLFLVAFGVKAGMFPLHVWAPDAYSETNQSYTAMFSGVLSKAGVYGMLVIY 260 Query: 263 MDL-------LAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGII 315 + L + G +G ++ +G ++ ++G L A ++DI++L A+S++ +G I Sbjct: 261 ILLGTRLVYQFGRIGAAPKFGYIIALLGGLTIIVGGLLAALQEDIRKLFAYSSISQIGYI 320 Query: 316 LLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMG 375 L+ +GV T + + A++H ++HALFKGL FL I+ R + + MG Sbjct: 321 LVGIGVG-----------TALSIEAAIYHAISHALFKGLFFLIVATIVLRTGKTEFKDMG 369 Query: 376 ALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVM 435 LA++MP T A + L+++ IPPL GF S+W ++++ + PI M Sbjct: 370 GLAEKMPITFAMAFVAILSLAGIPPLVGFASKWLLFEAVIHEN----------MPILGGM 419 Query: 436 LAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWL 495 + + + ++ + G R T ++ ++ P + +AM +LA L V+ ++ + Sbjct: 420 IFFGSAIGFVYLIRFTYAVWFGQ-RPTELDDTKDAPLPLAIAMGILALLNVVFGIAPGLV 478 Query: 496 APKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSR 555 A ++ I F + L G ++ L++ ++ ++ L + Sbjct: 479 AKELNKI---FGKEVIGGTIYELNLGFGRYNGLFITIWLVVGIVIAAIIYFLGAKVRKVP 535 Query: 556 RAAFRRTGDAWACGYG---WENAMAPSGNGVMQPLRVVFSALFR 596 + G+ Y N P + LR+ F L++ Sbjct: 536 VTDTYQAGNPVTMEYNLTIRRNFFLPLKETLAFWLRMSFDRLYQ 579 >UniRef50_C1TPN6 Formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit n=2 Tax=Synergistaceae RepID=C1TPN6_9BACT Length = 521 Score = 281 bits (720), Expect = 5e-74, Method: Composition-based stats. Identities = 114/450 (25%), Positives = 217/450 (48%), Gaps = 18/450 (4%) Query: 73 LTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMD 132 + L +DS ++F+ ++ + L+ L ++ + GK + A M+ L++ Sbjct: 84 IILEVDSFNSFIAVIGCFASLAGVLFGLRFLDRFSGK--VWYSSLYFLLTAGMLGLILTG 141 Query: 133 NAFWFIVLFEMMSLSSWFLVIARQDK-TSINAGMLYFFIAHAGSVLIMIAFLLMGRESGS 191 + F F V E+ S+SS+ L+ +D+ SI A Y ++ ++++++A + Sbjct: 142 DLFNFFVFLEIASVSSFGLIAYWRDRPESIEASFKYMLVSQVAAMMVLLAIGFLYGRYNL 201 Query: 192 LDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMV 251 L+ A+ + + K G P+H W+P A+ AP+ ++ V+ Sbjct: 202 LNMAAVGKVIQFGLAEKVALVFMITALAMKCGAFPMHMWMPDAYAEAPASV-TVLLVVVS 260 Query: 252 KIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVEN 311 + + G+ ++ + + ++ +G IS GV A+ + ++KRL+ + +V Sbjct: 261 QASLVGLCRIVFSVFGSAIVGDVVPWALITLGMISMFFGVSMAVVQHEVKRLMGYHSVSQ 320 Query: 312 VGIILLAVGVAMV--GLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTH 369 VG +L+A GV ++ G + + G +FH++N+ +KGLLFL AGA+ T Sbjct: 321 VGYMLMAFGVGLLAMGDPRQMADFGMTSMKGGIFHMVNYVTYKGLLFLVAGALYYVTGTR 380 Query: 370 DMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAG 429 D++KMG LAKRMP+T +I AIS IPP NGF+S+ ++S F++ Sbjct: 381 DLDKMGGLAKRMPFTTFMFVIAAAAISGIPPFNGFVSKLLIYESSFAVH----------- 429 Query: 430 PIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIA 489 P V+ VT L + FVK++ F G P + +EVP +M++ M +L + + ++ Sbjct: 430 PALSVVALVTSILTLASFVKVFQTAFLG-PEKKEFSKVKEVPASMVLGMAVLTVVILGLS 488 Query: 490 LSASWLAPKIMHIAHAFTNTPPATVASGIA 519 L +W+ ++ A A + + + Sbjct: 489 LFPTWVVSHLVEPAATALVDKGAYIGAVLG 518 >UniRef50_C5CEV1 NADH/Ubiquinone/plastoquinone (Complex I) n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CEV1_KOSOT Length = 492 Score = 281 bits (719), Expect = 6e-74, Method: Composition-based stats. Identities = 127/485 (26%), Positives = 232/485 (47%), Gaps = 32/485 (6%) Query: 9 WSLILYLFASLASLFLLGLDRLAIKLSGITSLVGG-VIGIISGITQLHAGVTLVARFAPP 67 + +I+ L A + L +++ +L +T+ I ++ G ++ + Sbjct: 5 YLVIIPLAAGFLIVLLGRKNKVLPELIALTATFSLLAISLLLFPMIESEGGAILYELSGW 64 Query: 68 FEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVA 127 ++ +D LSAF+V ++S L V+ ++YS+ YMR++ G + + I + Sbjct: 65 KIPYTISFVIDYLSAFLVTMVSALAVLSTIYSVGYMRKFSG--IWNYYALLMLMITGLNG 122 Query: 128 LLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGR 187 + + + F V E+ ++++ LV + A Y ++ S L++ + Sbjct: 123 VAITGDLFNLFVFMEIALIATYALVAFHGEAEHYEAAFKYAIMSSLSSSLVLFGIGCVYS 182 Query: 188 ESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMS 247 + SL + G + V+ L GFG KA M P HSWLP AHP+APS SA++S Sbjct: 183 MTSSLTLMQISNKMIGVGETNLVYALFLTGFGLKAAMFPFHSWLPDAHPSAPSPVSAMLS 242 Query: 248 GVMVKI-GIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAW 306 GV++K+ G + +++V + + L L + G +S ++G L A+ ++DIKR+L + Sbjct: 243 GVLIKVLGAYTLIRVFYMVFGVSELVKE---LFLIFGTLSMVIGALVAVMQKDIKRMLGF 299 Query: 307 STVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRL 366 S+V +G I+ A+G+ T +G+LGA++H+LNHA+ KGLLF+ AGA+ Sbjct: 300 SSVSQMGYIIFALGIG-----------TPLGVLGAIYHMLNHAVLKGLLFMDAGAVELIE 348 Query: 367 HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQ 426 T DME+M ++ R T L+ L IS +PP GF S+ + + Sbjct: 349 GTRDMEEMKGVSDRT--TYVTSLMASLGISGVPPFGGFFSKLIIITAAIYTGKF------ 400 Query: 427 LAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCV 486 I ++ + + ++ M F R+ + +P ++ + M++LA L + Sbjct: 401 ----IYAIIALAVSVITLGYYLGMLKKAF--RKRNKEVNDKGSLPASLKIPMIILAVLTL 454 Query: 487 LIALS 491 AL Sbjct: 455 ATALF 459 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P23482 Hydrogenase-4 component B n=69 Tax=Bacteria RepI... 524 e-147 UniRef50_Q8R9B0 Formate hydrogenlyase subunit 3/Multisubunit Na+... 489 e-136 UniRef50_C6CN10 NADH/Ubiquinone/plastoquinone (Complex I) n=15 T... 468 e-130 UniRef50_C8W236 Hydrogenase, membrane subunit n=1 Tax=Desulfotom... 453 e-126 UniRef50_Q1PZK0 Similar to membrane-bound [NiFe]-hydrogenase-3, ... 448 e-124 UniRef50_Q0W2B5 Hydrogenase, membrane subunit 4-like protein (Hy... 445 e-123 UniRef50_Q609T5 Hydrogenase subunit n=1 Tax=Methylococcus capsul... 444 e-123 UniRef50_B1ZSE3 NADH dehydrogenase (Quinone) n=1 Tax=Opitutus te... 443 e-122 UniRef50_C7MLM1 Formate hydrogenlyase subunit 3/multisubunit Na+... 443 e-122 UniRef50_Q0F380 NADH dehydrogenase subunit N n=1 Tax=Mariprofund... 431 e-119 UniRef50_B8I2P9 NADH/Ubiquinone/plastoquinone (Complex I) n=2 Ta... 430 e-119 UniRef50_C8PJ79 ATP-binding protein n=1 Tax=Campylobacter gracil... 428 e-118 UniRef50_D0WGR4 Hydrogenase subunit n=1 Tax=Slackia exigua ATCC ... 427 e-118 UniRef50_A5G8U2 NADH dehydrogenase (Quinone) n=13 Tax=Desulfurom... 425 e-117 UniRef50_B1ZSD9 NADH dehydrogenase (Quinone) n=2 Tax=Bacteria Re... 421 e-116 UniRef50_A7GWM7 ATP-binding protein n=4 Tax=Epsilonproteobacteri... 420 e-115 UniRef50_B2V8R6 NADH dehydrogenase (Quinone) n=1 Tax=Sulfurihydr... 417 e-115 UniRef50_B6AS28 NADH dehydrogenase (Quinone) n=3 Tax=Leptospiril... 416 e-114 UniRef50_B9XHI6 Proton-translocating NADH-quinone oxidoreductase... 416 e-114 UniRef50_B5YKJ0 NADH-quinone oxidoreductase chain l n=1 Tax=Ther... 412 e-113 UniRef50_Q11VC3 NADH dehydrogenase I chain L n=5 Tax=Bacteroidet... 411 e-113 UniRef50_Q1IS43 Proton-translocating NADH-quinone oxidoreductase... 411 e-113 UniRef50_A9EX64 NADH dehydrogenase (Ubiquinone) n=3 Tax=cellular... 411 e-113 UniRef50_Q12F20 NADH dehydrogenase (Quinone) n=37 Tax=Betaproteo... 410 e-112 UniRef50_C0YTV8 NADH dehydrogenase I chain L n=1 Tax=Chryseobact... 409 e-112 UniRef50_B8FUM3 NADH dehydrogenase (Quinone) n=3 Tax=Desulfitoba... 409 e-112 UniRef50_C0QBF3 HyfB n=1 Tax=Desulfobacterium autotrophicum HRM2... 408 e-112 UniRef50_B1WQD4 NADH dehydrogenase subunit 5 n=9 Tax=Cyanobacter... 407 e-112 UniRef50_A7I7D4 NADH dehydrogenase (Quinone) n=3 Tax=Methanomicr... 406 e-111 UniRef50_B0BZT2 Proton-translocating NAD(P)H-quinone oxidoreduct... 406 e-111 UniRef50_Q04YB3 NADH dehydrogenase (Ubiquinone), L chain n=7 Tax... 405 e-111 UniRef50_D0LZ05 Proton-translocating NADH-quinone oxidoreductase... 403 e-110 UniRef50_B8J1C9 Proton-translocating NADH-quinone oxidoreductase... 402 e-110 UniRef50_Q1RKE6 NADH-quinone oxidoreductase subunit L n=15 Tax=R... 402 e-110 UniRef50_B5EN60 Proton-translocating NADH-quinone oxidoreductase... 401 e-110 UniRef50_Q21AT7 NADH dehydrogenase (Quinone) n=16 Tax=Alphaprote... 400 e-110 UniRef50_A9QPJ4 Formate hydrogenlyase subunit 3 n=1 Tax=Methylac... 400 e-110 UniRef50_B3QXL9 Proton-translocating NADH-quinone oxidoreductase... 399 e-109 UniRef50_A0AL63 Complete genome n=20 Tax=Bacillales RepID=A0AL63... 398 e-109 UniRef50_A6LXP7 Proton-translocating NADH-quinone oxidoreductase... 397 e-109 UniRef50_B3Q7M3 Proton-translocating NADH-quinone oxidoreductase... 396 e-108 UniRef50_P31971 NAD(P)H-quinone oxidoreductase chain 5 n=25 Tax=... 396 e-108 UniRef50_B6WWH3 Putative uncharacterized protein n=1 Tax=Desulfo... 395 e-108 UniRef50_B2HHH3 Oxidoreductase n=6 Tax=Mycobacterium RepID=B2HHH... 395 e-108 UniRef50_D2QSX4 Proton-translocating NADH-quinone oxidoreductase... 395 e-108 UniRef50_B2IHV5 Proton-translocating NADH-quinone oxidoreductase... 395 e-108 UniRef50_C6HUH6 NADH dehydrogenase (Quinone), chain L n=2 Tax=Ba... 394 e-108 UniRef50_Q1IS54 Proton-translocating NADH-quinone oxidoreductase... 394 e-108 UniRef50_C6PUG7 NADH dehydrogenase (Quinone) n=1 Tax=Clostridium... 394 e-108 UniRef50_A3ERI6 NADH dehydrogenase (Quinone), chain L n=8 Tax=ce... 394 e-108 UniRef50_Q55429 NAD(P)H-quinone oxidoreductase chain 5 n=19 Tax=... 393 e-107 UniRef50_Q8M9U5 NAD(P)H-quinone oxidoreductase subunit 5, chloro... 393 e-107 UniRef50_Q6APE8 Probable hydrogenase, component B-formate hydrog... 393 e-107 UniRef50_UPI00003837CC COG1009: NADH:ubiquinone oxidoreductase s... 392 e-107 UniRef50_B0SZ37 Proton-translocating NADH-quinone oxidoreductase... 391 e-107 UniRef50_C1SM60 NADH dehydrogenase subunit L n=1 Tax=Denitrovibr... 391 e-107 UniRef50_Q1Z852 NADH dehydrogenase subunit N n=3 Tax=Vibrionacea... 390 e-107 UniRef50_Q32RH9 NAD(P)H-quinone oxidoreductase subunit 5, chloro... 390 e-106 UniRef50_A1ALQ0 Proton-translocating NADH-quinone oxidoreductase... 389 e-106 UniRef50_A5UVF8 Proton-translocating NADH-quinone oxidoreductase... 389 e-106 UniRef50_Q2FKT7 NADH dehydrogenase (Quinone) n=1 Tax=Methanospir... 389 e-106 UniRef50_Q9XAR5 NADH-quinone oxidoreductase subunit L n=38 Tax=A... 389 e-106 UniRef50_Q2W3J5 NADH:ubiquinone oxidoreductase subunit 5 n=6 Tax... 388 e-106 UniRef50_Q2S2L2 NADH dehydrogenase I, L subunit n=3 Tax=Rhodothe... 388 e-106 UniRef50_A1RWL8 NADH dehydrogenase (Quinone) n=1 Tax=Thermofilum... 388 e-106 UniRef50_Q28T51 Proton-translocating NADH-quinone oxidoreductase... 388 e-106 UniRef50_A6Q6W0 Ni-Fe hydrogenase, membrane subunit HycC/HyfB n=... 388 e-106 UniRef50_Q1AVJ0 Proton-translocating NADH-quinone oxidoreductase... 387 e-106 UniRef50_Q49W91 Na(+)/H(+) antiporter subunit A1 n=19 Tax=Bacill... 386 e-105 UniRef50_B9DJY9 Putative NADH dehydrogenase I chain L n=1 Tax=St... 386 e-105 UniRef50_Q02CT3 Proton-translocating NADH-quinone oxidoreductase... 386 e-105 UniRef50_A9B6Y2 Proton-translocating NADH-quinone oxidoreductase... 385 e-105 UniRef50_A1ZLY6 NAD(P)H-quinone oxidoreductase chain 5 (NAD(P)Hd... 385 e-105 UniRef50_B3PW10 NADH-ubiquinone oxidoreductase protein, chain L ... 384 e-105 UniRef50_C7LSU3 NADH dehydrogenase (Quinone) n=2 Tax=Bacteria Re... 384 e-105 UniRef50_C0Z765 NADH-quinone oxidoreductase chain L n=2 Tax=Baci... 384 e-105 UniRef50_C6VXR9 Proton-translocating NADH-quinone oxidoreductase... 384 e-105 UniRef50_A5FPH4 NADH dehydrogenase (Quinone) n=5 Tax=Dehalococco... 384 e-105 UniRef50_Q9RGZ5 Na(+)/H(+) antiporter subunit A n=9 Tax=Firmicut... 384 e-105 UniRef50_C6W0W0 Proton-translocating NADH-quinone oxidoreductase... 383 e-104 UniRef50_B3EIA1 Proton-translocating NADH-quinone oxidoreductase... 383 e-104 UniRef50_A7HHY8 Proton-translocating NADH-quinone oxidoreductase... 382 e-104 UniRef50_B8FRJ9 Proton-translocating NADH-quinone oxidoreductase... 382 e-104 UniRef50_C5A2R1 Formate hydrogenlyase II subunit D (Mhy2D) n=1 T... 382 e-104 UniRef50_C5QQQ5 CPA3 family monovalent cation:proton (H+) antipo... 381 e-104 UniRef50_A6UVK0 NADH dehydrogenase (Quinone) n=2 Tax=cellular or... 381 e-104 UniRef50_Q12ZH7 Na+/H+ antiporter subunit n=2 Tax=Methanosarcina... 381 e-104 UniRef50_Q2RXM5 NADH dehydrogenase (Quinone) n=1 Tax=Rhodospiril... 379 e-103 UniRef50_P50939 NADH-quinone oxidoreductase subunit L n=36 Tax=c... 379 e-103 UniRef50_Q2FZV1 Na(+)/H(+) antiporter subunit A1 n=72 Tax=Bacill... 378 e-103 UniRef50_Q3AH00 Proton-translocating NADH-quinone oxidoreductase... 378 e-103 UniRef50_Q9K1B0 NADH-quinone oxidoreductase subunit L n=127 Tax=... 378 e-103 UniRef50_D2BHY2 NADH:quinone oxidoreductase subunit 5 (Chain L) ... 377 e-103 UniRef50_B5YKQ9 Hydrogenase 4, component B or formate hydrogen l... 377 e-103 UniRef50_Q1H3T5 NADH dehydrogenase (Quinone) n=12 Tax=Proteobact... 376 e-102 UniRef50_Q5FC98 NADH-quinone oxidoreductase chain L n=18 Tax=Ric... 376 e-102 UniRef50_C2FWK2 Possible NADH dehydrogenase (Quinone) n=2 Tax=Sp... 375 e-102 UniRef50_C6MX91 NADH dehydrogenase (Quinone) n=1 Tax=Geobacter s... 375 e-102 UniRef50_C6D5D4 Proton-translocating NADH-quinone oxidoreductase... 375 e-102 UniRef50_B4RCL7 NADH dehydrogenase I, L subunit n=9 Tax=Proteoba... 374 e-102 UniRef50_Q0C1D3 NADH-quinone oxidoreductase, L subunit n=4 Tax=c... 374 e-102 UniRef50_A6TVL4 NADH dehydrogenase (Quinone) n=2 Tax=Alkaliphilu... 374 e-102 UniRef50_P29388 NADH-ubiquinone oxidoreductase chain 5 n=133 Tax... 373 e-102 UniRef50_B3QY40 Proton-translocating NADH-quinone oxidoreductase... 373 e-102 UniRef50_B1KJV8 Proton-translocating NADH-quinone oxidoreductase... 373 e-101 UniRef50_UPI00016C46D7 NADH dehydrogenase I chain L n=1 Tax=Gemm... 373 e-101 UniRef50_C0JX69 Subunit 5 of NADH-plastoquinone oxidoreductase n... 373 e-101 UniRef50_C1F220 NADH dehydrogenase I, L subunit n=2 Tax=Bacteria... 372 e-101 UniRef50_A0RMA9 Hydrogenase 4 membrane subunit n=2 Tax=Campyloba... 371 e-101 UniRef50_B2V982 Proton-translocating NADH-quinone oxidoreductase... 371 e-101 UniRef50_B6YQ51 NADH dehydrogenase I subunit L n=32 Tax=Bacteroi... 370 e-101 UniRef50_C9RKX6 Proton-translocating NADH-quinone oxidoreductase... 369 e-100 UniRef50_A8LTG8 NADH dehydrogenase (Quinone) n=58 Tax=Proteobact... 369 e-100 UniRef50_C6XJX2 Proton-translocating NADH-quinone oxidoreductase... 369 e-100 UniRef50_C1ZFV1 NADH dehydrogenase subunit L n=1 Tax=Planctomyce... 368 e-100 UniRef50_B3DZT2 NADH dehydrogenase subunit L n=2 Tax=Verrucomicr... 368 e-100 UniRef50_Q39QB8 NADH-plastoquinone oxidoreductase, chain 5 n=8 T... 368 e-100 UniRef50_A7GV43 Proton-translocating NADH-quinone oxidoreductase... 368 e-100 UniRef50_B2A694 NADH dehydrogenase (Quinone) n=1 Tax=Natranaerob... 368 e-100 UniRef50_B4UA31 NADH dehydrogenase (Quinone) n=1 Tax=Hydrogenoba... 367 e-100 UniRef50_B9ZEN4 Proton-translocating NADH-quinone oxidoreductase... 367 e-100 UniRef50_D2QRI2 Proton-translocating NADH-quinone oxidoreductase... 367 e-100 UniRef50_B3E6C5 NADH dehydrogenase (Quinone) n=4 Tax=Desulfuromo... 366 1e-99 UniRef50_Q4UWA7 NADH-ubiquinone oxidoreductase NQO12 subunit n=5... 366 2e-99 UniRef50_B2ULN9 Proton-translocating NADH-quinone oxidoreductase... 366 2e-99 UniRef50_C5VLQ3 NADH dehydrogenase subunit 5 n=10 Tax=Bacteroida... 366 2e-99 UniRef50_C7JBM0 NADH-quinone oxidoreductase chain L n=8 Tax=Acet... 366 2e-99 UniRef50_Q67KP4 NADH dehydrogenase I subunit L n=1 Tax=Symbiobac... 365 3e-99 UniRef50_A7HGW4 NADH dehydrogenase (Quinone) n=4 Tax=Anaeromyxob... 364 4e-99 UniRef50_Q3J3E6 NADH dehydrogenase I chain L n=72 Tax=cellular o... 364 5e-99 UniRef50_B2SEW0 NADH dehydrogenase I, L subunit n=25 Tax=Proteob... 364 6e-99 UniRef50_Q1IZW2 NADH-quinone oxidoreductase, L subunit n=3 Tax=D... 364 8e-99 UniRef50_C6NX32 Hydrogenase-4 component B / Formate hydrogenlyas... 363 1e-98 UniRef50_C5NVG1 Na(+)/H(+) antiporter subunit A n=1 Tax=Gemella ... 362 2e-98 UniRef50_Q52978 Probable K(+)/H(+) antiporter subunit A/B n=110 ... 361 7e-98 UniRef50_D0D447 NADH-quinone oxidoreductase subunit l n=65 Tax=c... 359 1e-97 UniRef50_A9B485 Proton-translocating NADH-quinone oxidoreductase... 359 1e-97 UniRef50_B8IYV9 NADH dehydrogenase (Quinone) n=3 Tax=Desulfovibr... 359 3e-97 UniRef50_C0A9K9 NADH dehydrogenase (Quinone) n=1 Tax=Opitutaceae... 358 4e-97 UniRef50_D2RZ77 Proton-translocating NADH-quinone oxidoreductase... 358 5e-97 UniRef50_Q6GBK7 Putative antiporter subunit mnhA2 n=63 Tax=Staph... 358 6e-97 UniRef50_UPI00003845F5 COG0651: Formate hydrogenlyase subunit 3/... 357 7e-97 UniRef50_C8XAR9 NADH/Ubiquinone/plastoquinone (Complex I) n=1 Ta... 356 1e-96 UniRef50_Q34313 NADH-ubiquinone oxidoreductase chain 5 n=6 Tax=E... 356 2e-96 UniRef50_C4V3R7 NADH dehydrogenase (Quinone) n=1 Tax=Selenomonas... 356 2e-96 UniRef50_Q2YA95 Proton-translocating NADH-quinone oxidoreductase... 356 2e-96 UniRef50_A9A3Z7 Proton-translocating NADH-quinone oxidoreductase... 356 2e-96 UniRef50_Q466B6 F420H2 dehydrogenase subunit L n=5 Tax=Methanosa... 355 3e-96 UniRef50_A1SE38 Proton-translocating NADH-quinone oxidoreductase... 355 3e-96 UniRef50_C2BM70 CPA3 family monovalent cation:proton (H+) antipo... 355 4e-96 UniRef50_C1A8Y3 NADH-quinone oxidoreductase chain L n=1 Tax=Gemm... 354 7e-96 UniRef50_C7M2U8 Proton-translocating NADH-quinone oxidoreductase... 353 2e-95 UniRef50_C2KMP0 NADH dehydrogenase (Quinone) n=2 Tax=Mobiluncus ... 353 2e-95 UniRef50_Q2C5U2 NADH-plastoquinone oxidoreductase, chain 5 n=2 T... 353 2e-95 UniRef50_B2A3T0 NADH dehydrogenase (Quinone) n=2 Tax=Clostridia ... 352 3e-95 UniRef50_D1Y0I6 Putative NADH dehydrogenase subunit L n=1 Tax=Pr... 351 5e-95 UniRef50_B1ZRS2 Proton-translocating NADH-quinone oxidoreductase... 351 6e-95 UniRef50_Q10880 Uncharacterized protein Rv0083/MT0090 n=15 Tax=M... 351 7e-95 UniRef50_A5CFN9 NADH dehydrogenase I chain L n=2 Tax=Orientia ts... 350 1e-94 UniRef50_Q8HHD2 NADH-ubiquinone oxidoreductase chain 5 n=1 Tax=C... 350 1e-94 UniRef50_UPI0001C3127D proton-translocating NADH-quinone oxidore... 349 2e-94 UniRef50_C0WGQ4 CPA3 family monovalent cation:proton (H+) antipo... 349 2e-94 UniRef50_C0GRM0 Proton-translocating NADH-quinone oxidoreductase... 348 3e-94 UniRef50_B4SLF9 NADH dehydrogenase (Quinone) n=20 Tax=cellular o... 348 4e-94 UniRef50_D1B457 NADH/Ubiquinone/plastoquinone (Complex I) n=2 Ta... 347 7e-94 UniRef50_C0GDB1 NADH dehydrogenase (Quinone) n=2 Tax=Dethiobacte... 347 7e-94 UniRef50_A4GYW4 NAD(P)H-quinone oxidoreductase subunit 5, chloro... 347 8e-94 UniRef50_B6YWP6 Hydrogenase 4, subunit 3 n=3 Tax=Thermococcus Re... 347 9e-94 UniRef50_D0XMF8 NADH dehydrogenase (Quinone) n=3 Tax=Alphaproteo... 347 1e-93 UniRef50_Q35099 NADH-ubiquinone oxidoreductase chain 5 n=58 Tax=... 346 2e-93 UniRef50_B6YTW6 Hydrogenase 4, component B or formate hydrogen l... 346 2e-93 UniRef50_C7NIQ7 NADH:ubiquinone oxidoreductase subunit 5 (Chain ... 345 4e-93 UniRef50_Q85FH9 NAD(P)H-quinone oxidoreductase subunit 5, chloro... 345 4e-93 UniRef50_A6TVL5 NADH dehydrogenase (Quinone) n=1 Tax=Alkaliphilu... 345 4e-93 UniRef50_A1ASR6 NADH dehydrogenase (Quinone) n=1 Tax=Pelobacter ... 344 5e-93 UniRef50_P56752 NAD(P)H-quinone oxidoreductase subunit 5, chloro... 344 8e-93 UniRef50_Q47T29 NADH dehydrogenase (Quinone) n=4 Tax=Actinomycet... 343 1e-92 UniRef50_A5GD02 Proton-translocating NADH-quinone oxidoreductase... 343 1e-92 UniRef50_A2T411 NADH-ubiquinone oxidoreductase chain 5 n=7 Tax=M... 343 1e-92 UniRef50_C1AB28 NADH-quinone oxidoreductase chain L n=1 Tax=Gemm... 342 2e-92 UniRef50_B1NWJ6 NAD(P)H-quinone oxidoreductase subunit 5, chloro... 342 2e-92 UniRef50_C4LLM4 Na(+)/H(+) antiporter subunit n=3 Tax=Corynebact... 342 3e-92 UniRef50_C6HVM9 Putative formate hydrogenlyase subunit 3 (HyfB) ... 342 3e-92 UniRef50_Q9HJK6 NADH dehydrogenase, chain L related protein n=6 ... 341 4e-92 UniRef50_Q7NHD8 NADH dehydrogenase subunit 5 n=1 Tax=Gloeobacter... 341 6e-92 UniRef50_C9N684 Proton-translocating NADH-quinone oxidoreductase... 341 7e-92 UniRef50_A8A9X6 Proton-translocating NADH-quinone oxidoreductase... 341 7e-92 UniRef50_Q608Y7 NADH dehydrogenase I, L subunit n=2 Tax=Gammapro... 340 1e-91 UniRef50_B5EKJ3 NADH dehydrogenase (Quinone) n=2 Tax=Acidithioba... 340 1e-91 UniRef50_C5C4D6 NADH dehydrogenase (Quinone) n=2 Tax=Micrococcin... 338 3e-91 UniRef50_Q895D8 Sodium/proton antiporter shaA n=1 Tax=Clostridiu... 338 4e-91 UniRef50_P50365 NADH-ubiquinone oxidoreductase chain 5 n=2 Tax=A... 338 5e-91 UniRef50_Q6MDQ5 Putative NADH-ubiquinone oxidoreductase chain L ... 337 6e-91 UniRef50_C4K6N0 NADH dehydrogenase I chain L, membrane subunit n... 336 1e-90 UniRef50_A5UV30 NADH dehydrogenase (Quinone) n=4 Tax=Bacteria Re... 336 2e-90 UniRef50_D2ILR8 NADH-ubiquinone oxidoreductase chain 5 n=3 Tax=C... 336 2e-90 UniRef50_C9RJK6 Proton-translocating NADH-quinone oxidoreductase... 336 2e-90 UniRef50_B0SFU4 NADH dehydrogenase (Ubiquinone), M chain n=6 Tax... 336 2e-90 UniRef50_P50368 NADH-ubiquinone oxidoreductase chain 5 n=11 Tax=... 336 2e-90 UniRef50_Q1IS53 Proton-translocating NADH-quinone oxidoreductase... 335 3e-90 UniRef50_B0VE74 pH adaptation potassium efflux system transmembr... 335 4e-90 UniRef50_UPI0001B5496D NADH dehydrogenase I chain L n=1 Tax=Stre... 335 4e-90 UniRef50_A9F578 NADH dehydrogenase I chain M n=1 Tax=Sorangium c... 334 6e-90 UniRef50_Q6UVP8 NADH-ubiquinone oxidoreductase chain 5 n=33 Tax=... 334 6e-90 UniRef50_P05510 NADH-ubiquinone oxidoreductase chain 5 n=1247 Ta... 334 8e-90 UniRef50_Q9UYN2 Hydrogenase 4, component B or formate hydrogen l... 333 1e-89 UniRef50_A8ERK5 NADH-quinone oxidoreductase, L subunit n=1 Tax=A... 333 1e-89 UniRef50_A1WYN7 NADH dehydrogenase (Quinone) n=5 Tax=Gammaproteo... 332 2e-89 UniRef50_A6DPK7 NADH-ubiquinone/plastoquinone family protein n=1... 332 3e-89 UniRef50_Q21TB8 NADH dehydrogenase (Quinone) n=2 Tax=Proteobacte... 332 3e-89 UniRef50_P16429 Formate hydrogenlyase subunit 3 n=77 Tax=Bacteri... 331 6e-89 UniRef50_Q67NV3 Na+/H+ antiporter subunit n=1 Tax=Symbiobacteriu... 331 8e-89 UniRef50_C8NJU8 NADH ubiquinone oxidoreductase subunit 5 (Chain ... 330 9e-89 UniRef50_Q9PMA7 NADH-quinone oxidoreductase subunit L n=43 Tax=E... 330 9e-89 UniRef50_A1SQ81 NADH dehydrogenase (Quinone) n=2 Tax=Actinomycet... 330 1e-88 UniRef50_Q2GF39 NADH dehydrogenase I, L subunit n=2 Tax=Neoricke... 329 2e-88 UniRef50_D1A433 Proton-translocating NADH-quinone oxidoreductase... 329 2e-88 UniRef50_UPI00005100B6 putative monovalent cation/H+ antiporter ... 329 3e-88 UniRef50_B9LUW7 NADH/Ubiquinone/plastoquinone (Complex I) n=13 T... 329 3e-88 UniRef50_C0A4J1 NADH dehydrogenase (Quinone) n=1 Tax=Opitutaceae... 327 8e-88 UniRef50_A0QQR3 NADH ubiquinone oxidoreductase subunit 5 n=9 Tax... 327 8e-88 UniRef50_C1XJC0 NADH dehydrogenase subunit L n=2 Tax=Meiothermus... 327 9e-88 UniRef50_Q2S1W7 NADH dehydrogenase, putative n=1 Tax=Salinibacte... 327 1e-87 UniRef50_Q12ZH4 Na+/H+ antiporter subunit n=2 Tax=Methanosarcina... 326 1e-87 UniRef50_C0W918 Na(+)/H(+) antiporter subunit n=1 Tax=Actinomyce... 326 2e-87 UniRef50_Q9ZZQ0 NADH-ubiquinone oxidoreductase chain 5 n=1 Tax=C... 326 2e-87 UniRef50_C0GJ41 NADH dehydrogenase (Quinone) n=1 Tax=Dethiobacte... 325 4e-87 UniRef50_Q1QZ48 NADH dehydrogenase (Quinone) n=15 Tax=cellular o... 324 7e-87 UniRef50_B1VI36 pH adaptation potassium efflux system transmembr... 324 7e-87 UniRef50_B4U8H9 Proton-translocating NADH-quinone oxidoreductase... 324 8e-87 UniRef50_Q28L00 NADH dehydrogenase (Quinone) n=1 Tax=Jannaschia ... 324 1e-86 UniRef50_Q67P11 NADH dehydrogenase I subunit L n=1 Tax=Symbiobac... 324 1e-86 UniRef50_A9A3Z6 Proton-translocating NADH-quinone oxidoreductase... 323 1e-86 UniRef50_C5A3D6 Formate hydrogenlyase I subunit D (Mhy1D) n=2 Ta... 323 1e-86 UniRef50_C8XH11 NADH/Ubiquinone/plastoquinone (Complex I) n=1 Ta... 323 1e-86 UniRef50_B2A693 Proton-translocating NADH-quinone oxidoreductase... 323 2e-86 UniRef50_B6YWQ6 Hydrogenase 4, subunit 3 n=2 Tax=Thermococcus Re... 322 2e-86 UniRef50_B6YT76 Hydrogenase 4, component B or formate hydrogen l... 322 2e-86 UniRef50_A4X1Y8 Proton-translocating NADH-quinone oxidoreductase... 322 3e-86 UniRef50_B3QPF9 NADH dehydrogenase (Quinone) n=1 Tax=Chlorobacul... 321 5e-86 UniRef50_C0XU58 CPA3 family monovalent cation (K+ or Na+):proton... 321 6e-86 UniRef50_D0LWA1 NADH/Ubiquinone/plastoquinone (Complex I) n=1 Ta... 321 6e-86 UniRef50_Q6L0I7 NADH-quinone oxidoreductase chain L n=1 Tax=Picr... 320 1e-85 UniRef50_Q56227 NADH-quinone oxidoreductase subunit 12 n=3 Tax=T... 320 1e-85 UniRef50_B6J444 Sodium/proton antiporter protein n=5 Tax=Coxiell... 320 1e-85 UniRef50_C7MG69 NADH:ubiquinone oxidoreductase subunit 5 (Chain ... 320 1e-85 UniRef50_B5QVA0 Formate hydrogenlyase subunit 3 n=43 Tax=Enterob... 319 2e-85 UniRef50_C0VMK3 NADH dehydrogenase I subunit L n=1 Tax=Acinetoba... 319 2e-85 Sequences not found previously or not previously below threshold: UniRef50_C7R7H2 Proton-translocating NADH-quinone oxidoreductase... 388 e-106 UniRef50_B0R3U9 NADH dehydrogenase-like complex subunit L n=9 Ta... 351 7e-95 >UniRef50_P23482 Hydrogenase-4 component B n=69 Tax=Bacteria RepID=HYFB_ECOLI Length = 672 Score = 524 bits (1351), Expect = e-147, Method: Composition-based stats. Identities = 672/672 (100%), Positives = 672/672 (100%) Query: 1 MDALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTL 60 MDALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTL Sbjct: 1 MDALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTL 60 Query: 61 VARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNI 120 VARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNI Sbjct: 61 VARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNI 120 Query: 121 FIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMI 180 FIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMI Sbjct: 121 FIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMI 180 Query: 181 AFLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPS 240 AFLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPS Sbjct: 181 AFLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPS 240 Query: 241 HASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDI 300 HASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDI Sbjct: 241 HASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDI 300 Query: 301 KRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAG 360 KRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAG Sbjct: 301 KRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAG 360 Query: 361 AIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRV 420 AIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRV Sbjct: 361 AIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRV 420 Query: 421 EAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLL 480 EAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLL Sbjct: 421 EAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLL 480 Query: 481 LAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLA 540 LAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLA Sbjct: 481 LAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLA 540 Query: 541 MPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQ 600 MPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQ Sbjct: 541 MPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQ 600 Query: 601 LDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVV 660 LDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVV Sbjct: 601 LDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVV 660 Query: 661 AALVVLLIAIAV 672 AALVVLLIAIAV Sbjct: 661 AALVVLLIAIAV 672 >UniRef50_Q8R9B0 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit n=2 Tax=Thermoanaerobacteraceae RepID=Q8R9B0_THETN Length = 673 Score = 489 bits (1259), Expect = e-136, Method: Composition-based stats. Identities = 287/673 (42%), Positives = 420/673 (62%), Gaps = 4/673 (0%) Query: 1 MDALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTL 60 M QL S+ LY+ +L SL L ++A +SG T+ + G G+ S + L G Sbjct: 2 MTVQQLFLLSIFLYVVGALISLGLNRDGKIANYVSGTTAFLAGCTGVASAVPVLIEGKGF 61 Query: 61 VARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNI 120 + F T+ +D LSAFM LVISLL + +YS++Y EY GKG MGF NI Sbjct: 62 ILEGMEFIPFGRFTINVDPLSAFMTLVISLLSIATGVYSISYQEEYIGKGTGVMGFLNNI 121 Query: 121 FIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQD-KTSINAGMLYFFIAHAGSVLIM 179 FI SM+ ++ DNAF+F+V +E+M+L S+FLV Q+ + +I AG +YF +AH G+VLIM Sbjct: 122 FIVSMILVVTSDNAFYFLVFWELMTLVSYFLVCFEQENREAIKAGFVYFVMAHVGTVLIM 181 Query: 180 IAFLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAP 239 I+F+L +G+ DFA+FR +LSP + + FLLAF GFG KAG++P H WLP+AHPAAP Sbjct: 182 ISFILFYVYTGTFDFAAFRNANLSPVIKNLAFLLAFLGFGVKAGIVPFHFWLPQAHPAAP 241 Query: 240 SHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQD 299 S+ SALMSGVM+K I+GI++V +D L WWG+ V+A GAISA+ GVLYA++E D Sbjct: 242 SNVSALMSGVMIKTAIYGIIRVGVDFLGAA--TWWWGLTVLAFGAISAVFGVLYAVSEND 299 Query: 300 IKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGA 359 +KRLLA+S++ENVGIIL+ VG M+G++ + ++G+L L+HL+NHA+FKGLLFLGA Sbjct: 300 LKRLLAYSSIENVGIILMGVGAGMMGIATGYVSVGILGILAGLYHLINHAVFKGLLFLGA 359 Query: 360 GAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSR 419 G+++ RLHT +ME+MG LA+ MPWT IG L+ISA+PPLNGF+S+W+T+ +LF++S Sbjct: 360 GSVVYRLHTRNMEEMGGLARYMPWTGLTFFIGALSISALPPLNGFVSKWFTYHTLFAVST 419 Query: 420 VEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAML 479 +V +++A P+A V LA+TG L +CFVK YG+TF G R + + +EVP TM++ M Sbjct: 420 KGSVLIRMAFPLAAVALALTGALTSLCFVKAYGVTFTGPFRGGNELKIKEVPVTMLIGMG 479 Query: 480 LLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLL 539 LLA C ++ L A A I ++A A + V+ G+++ P + + + L+L+ + Sbjct: 480 LLAIGCFVLGLGAPVGAGYIANVASALLHVSSPKVSDGLSIFPASSEQAMLSTPLVLVFV 539 Query: 540 AMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQ 599 + L + +RA R + WACGY + + MA + L +FS ++ LR Sbjct: 540 VGLAILPLLIIGTGGKRAGRRVDFEPWACGYKYSSRMAWTSTAFAHSLYPLFSPVYLLRT 599 Query: 600 QLDPTLR-LNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLY 658 R + A E W+ + P++ + K Q Q+G+ R+YCLY Sbjct: 600 AFTEAGRFIILLFKKAMAYISQIELMWERYIYYPLLHFMVYIGKRAQTFQTGNVRMYCLY 659 Query: 659 VVAALVVLLIAIA 671 ++ L VLLIA Sbjct: 660 IILTLGVLLIATV 672 >UniRef50_C6CN10 NADH/Ubiquinone/plastoquinone (Complex I) n=15 Tax=Gammaproteobacteria RepID=C6CN10_DICZE Length = 679 Score = 468 bits (1206), Expect = e-130, Method: Composition-based stats. Identities = 400/660 (60%), Positives = 498/660 (75%), Gaps = 4/660 (0%) Query: 1 MDALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTL 60 + LQ L SL LYL +L SL + LAI+LSG+ +L GG G+++ L G L Sbjct: 8 ITPLQGLGLSLALYLAGALFSLLCCRRESLAIRLSGLCALAGGCAGVLAAAPVLLGGGAL 67 Query: 61 VARFAPPFE-FADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMN 119 A F PF+ FA LTLR D+L+AFM LVISLLV V +LYSL Y+ EY G+GA AMGFFMN Sbjct: 68 TAIFDGPFDAFAHLTLRFDTLAAFMTLVISLLVTVSALYSLAYLEEYRGRGAWAMGFFMN 127 Query: 120 IFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIM 179 +F+ASMVAL+V+DNAF+FIVLFE+MSLSS+FLVIA QD +++AG+LYF IAHAGSVLIM Sbjct: 128 LFVASMVALVVVDNAFYFIVLFEVMSLSSYFLVIADQDDEAVSAGLLYFLIAHAGSVLIM 187 Query: 180 IAFLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAP 239 AF L+ R S SLDFA FR SLS AS VFLLAFFGFGAKAGM+PLH WLPRAHPAAP Sbjct: 188 AAFFLLYRHSASLDFADFRHASLSAPQASVVFLLAFFGFGAKAGMLPLHGWLPRAHPAAP 247 Query: 240 SHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQD 299 SHASALMSGVMVKIG+FGI+KV +DLL T WWG++V+A GA+S++LGVLYALAE D Sbjct: 248 SHASALMSGVMVKIGVFGIIKVGIDLLGATE--TWWGVVVLAFGAVSSVLGVLYALAEHD 305 Query: 300 IKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGA 359 IKRLLA+ TVEN+GIIL+ VGV M+G++ H PLL ++GLLG L+HLLNHA+FKGLLFLGA Sbjct: 306 IKRLLAYHTVENIGIILMGVGVGMIGIATHHPLLALLGLLGGLYHLLNHAVFKGLLFLGA 365 Query: 360 GAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSR 419 GA+I R+HT DMEKMG LA+ MP TA A L+GC+AISA+PPLNGF+SEW+T+QSLF+LS Sbjct: 366 GAVIYRVHTKDMEKMGGLARLMPRTALAFLVGCMAISALPPLNGFVSEWFTYQSLFTLSH 425 Query: 420 VEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAML 479 + L+LA PIA+VMLA+TG LA MCFVK+YGI+FCGAPRS A A+EVP M VAML Sbjct: 426 DGGIGLRLAAPIAIVMLAITGALAAMCFVKVYGISFCGAPRSEKATHAREVPWPMTVAML 485 Query: 480 LLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPG-TFHTQVTPSLLLLLL 538 LLA LCVL+ + AS ++P I IA TP +A G+ + PG + T++ L+ +LL Sbjct: 486 LLALLCVLLGIGASVVSPIITRIAADLAQTPAVAMAQGLGVFPGDSQQTRLNTPLIFILL 545 Query: 539 LAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLR 598 LA+PLLP + + R R FR+ G WACGYG+E AM+ S QPLRV+F+ L+R+R Sbjct: 546 LALPLLPLMLYSLLRGPRLGFRQKGTPWACGYGYEQAMSASAGSFTQPLRVMFAPLYRVR 605 Query: 599 QQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLY 658 + LDP + + L T A EP WD+RV+ P+VS QR+++ +Q +Q GDFR+YCLY Sbjct: 606 KTLDPAPAMQQALEKTTQAAARAEPVWDDRVVMPLVSGVQRISRAVQWIQHGDFRVYCLY 665 >UniRef50_C8W236 Hydrogenase, membrane subunit n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W236_DESAS Length = 661 Score = 453 bits (1167), Expect = e-126, Method: Composition-based stats. Identities = 234/672 (34%), Positives = 354/672 (52%), Gaps = 21/672 (3%) Query: 4 LQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVAR 63 QL ++LYL ++ L L +L++ L G++G+ G+ L A Sbjct: 7 EQLGLMVILLYLSGAILPLLLKTSRKLSLWLGCFLGGAAGLLGLGLGLASLLAPEPWTVN 66 Query: 64 FAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIA 123 + MD LS F V ISL+V + S YS YM Y+ + A F N+F+ Sbjct: 67 LGTVLPGVVFQIVMDGLSGFFVATISLVVALVSFYSWNYMSIYKTENIAWWSFCYNVFVL 126 Query: 124 SMVALLVMDNAFWFIVLFEMMSLSSWFLVIA-RQDKTSINAGMLYFFIAHAGSVLIMIAF 182 SM+ ++ + NA F++ +E+M+L+S+FLV + + AG Y + H G+V IM AF Sbjct: 127 SMLLVVTVTNAIMFLIFWELMTLASYFLVTFEYRHQQVRKAGFSYIVMTHLGTVFIMTAF 186 Query: 183 LLMGRESGSLDFASFRT--LSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPS 240 LM + +G DFA L + S +F+ A GFG KAG++PLH WLP AHPAAPS Sbjct: 187 FLMFKGTGGWDFAVLSANSHGLPDAVKSLIFVCALIGFGTKAGIVPLHIWLPLAHPAAPS 246 Query: 241 HASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDI 300 + SA+MSGVM+K I+G++++ +D+L P WWG +V+A+G +SA++GVLYAL E D+ Sbjct: 247 NVSAVMSGVMLKTAIYGMIRLIIDILGPG--PAWWGGVVLAVGVVSAVMGVLYALMEHDM 304 Query: 301 KRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAG 360 KRLLA+ +VEN+GIIL+ +G A++ + P+ V L LFH+LNHA+FK LLFLG G Sbjct: 305 KRLLAFHSVENIGIILMGLGTALIFYAWSMPVAAAVALAAGLFHVLNHAIFKSLLFLGTG 364 Query: 361 AIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFS-LSR 419 ++ H+ D+E++G L K+MP TA L+G ++ISAIPP NGF SE+ +QSL + Sbjct: 365 SVYYTTHSKDIEELGGLIKKMPQTALLFLVGAISISAIPPFNGFASEYQIYQSLLGMSYQ 424 Query: 420 VEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAML 479 + +AG ++ V LA+TG LA CFVK +GI+F PR+ A A+EVP M ++M Sbjct: 425 KVSAFWSIAGVLSGVALALTGALAAACFVKAFGISFLALPRTKKAAAAEEVPFLMRISMA 484 Query: 480 LLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLL 539 LA LC+L ++ + I + P + + V L + L Sbjct: 485 PLAVLCLLFGVAPGLVLNNITPLIEQLVPGTPLPEIATYNMNLTLLLVLVGVFLFVASKL 544 Query: 540 AMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQ 599 R + W CG M + QP+R + A+ + ++ Sbjct: 545 TGA---------------KKVRRTETWGCGIELTAEMEYTAASFSQPVRRTYRAILQPKR 589 Query: 600 QLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYV 659 ++ RL + P ++ + P+ + +K QH+QSG LY Y+ Sbjct: 590 KVKNNYRLLPYFDFHIHFDEHVRPVIEDFLYNPLRKTIIKTSKIWQHIQSGSINLYLGYI 649 Query: 660 VAALVVLLIAIA 671 LVVLL+ Sbjct: 650 FITLVVLLVWAR 661 >UniRef50_Q1PZK0 Similar to membrane-bound [NiFe]-hydrogenase-3, subunit C n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PZK0_9BACT Length = 678 Score = 448 bits (1152), Expect = e-124, Method: Composition-based stats. Identities = 227/678 (33%), Positives = 366/678 (53%), Gaps = 11/678 (1%) Query: 3 ALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVA 62 A L S+ILY +L +L + +S I + + I+ I+ L G+ + Sbjct: 2 AEHLFVISIILYAIGALFALCFFKWQAVGNYISLICAAIASCFSIVLSISVLTNGLIIHF 61 Query: 63 RFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFF-MNIF 121 F +D LS+F +LVIS++ V S+YS+ Y + Y K F N+ Sbjct: 62 DFLIYHAIIRYNFLLDPLSSFFMLVISVIGFVASIYSMGYTKLYVNKRDTRFLGFAYNLL 121 Query: 122 IASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQD-KTSINAGMLYFFIAHAGSVLIMI 180 + SM+ ++ +NA F++++E+M+L S+FLVI + T+ AG +Y ++H G+ LI + Sbjct: 122 LVSMLLVVTANNALVFMIVWELMTLVSFFLVIFEHENPTNRKAGYVYLVMSHIGAGLIAV 181 Query: 181 AFLLMGRESG---SLDFASFRTLS--LSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAH 235 AF +M +G + F FR + + P + VF L GFG KAG+ PLH WLP AH Sbjct: 182 AFFIMFAYAGEAFTFSFDDFRHIGAHMPPIYKNIVFFLIIIGFGIKAGIFPLHLWLPMAH 241 Query: 236 PAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYAL 295 PAAPS+ S +MSGVM+K I+G ++ + L T P WWG +V+ GA SA+LG+LYAL Sbjct: 242 PAAPSNVSMVMSGVMIKTAIYGFIRFYFEFL--TPCPPWWGFIVLVAGASSAILGILYAL 299 Query: 296 AEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLL 355 E+DIK LLA+S+VEN+GIIL+ +G++M+ S + L+ + ++ L+HL+NHA+FK LL Sbjct: 300 MERDIKTLLAYSSVENIGIILIGIGLSMIFKSYNLMTLSSLAMMAGLYHLINHAVFKCLL 359 Query: 356 FLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLF 415 F AG I HT ++E++G L KR+ TA L+G L+ISAIPPLNGF+SEW +QSL Sbjct: 360 FGCAGNIYYSTHTKNIEELGGLIKRLRVTAPLFLVGALSISAIPPLNGFMSEWLIFQSLL 419 Query: 416 SLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMI 475 + + +V ++ I ++A+TG L MCFVK +G++F PRS H +A+EVP M+ Sbjct: 420 NGFYIPSVFFKVMTVICGAIVALTGALVAMCFVKAFGVSFLALPRSEHTRKAKEVPLVML 479 Query: 476 VAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLL 535 V+M +LA++CV + L + + I + T + + + L Sbjct: 480 VSMGILASMCVFMGLFPATIMATINQVNTHLLGTNIINIITSYDWLQTKSIHTNFTDLSP 539 Query: 536 --LLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSA 593 + + LL + R +R + W CG E + +P +V+F Sbjct: 540 KSAPIFGLILLVITFGFLTMLRPGFTKRIYETWTCGITPEPRFGYTATAFTKPFKVIFGN 599 Query: 594 LFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFR 653 L+R R ++ T + K A P +++ P+ S ++ +I+ + +G Sbjct: 600 LYRPRFEISTTYSVPKYFAKSITYLGEITPIFEKYFYNPVSSYVLNISNKIRWVHTGSIH 659 Query: 654 LYCLYVVAALVVLLIAIA 671 +Y Y+ L++ ++++ Sbjct: 660 VYLAYIFVTLLIAILSVI 677 >UniRef50_Q0W2B5 Hydrogenase, membrane subunit 4-like protein (HycC-like) n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W2B5_UNCMA Length = 681 Score = 445 bits (1146), Expect = e-123, Method: Composition-based stats. Identities = 247/679 (36%), Positives = 381/679 (56%), Gaps = 12/679 (1%) Query: 3 ALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVA 62 L ++ L + ++ L A G ++ + ++ + L G+ Sbjct: 5 LEYLFAALVLTSLIGACGAIVLRRNKYCAYVAFGAATMTSVIGATLAAVILLGPGLNPEL 64 Query: 63 R------FAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGK-GAAAMG 115 F +++ +D LSAF +L IS++ S+YS+ Y REY GK +G Sbjct: 65 SPGLRMILPMYTPFGEMSFTVDPLSAFFILAISIVGFAVSVYSIGYSREYVGKYSIGLLG 124 Query: 116 FFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIAR-QDKTSINAGMLYFFIAHAG 174 N+F+ SM+ ++ NA F++++E+MS+ S+ LV+ + K +++AG LY + H G Sbjct: 125 SIFNLFLLSMILVVTAGNAIQFLIVWEVMSILSYLLVVYENRKKEAVSAGFLYIVMTHLG 184 Query: 175 SVLIMIAFLLMGRESGSLDFASF--RTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLP 232 + I + FLL+ +GS DFASF +L + S F+L GFG KAG+MPLH WLP Sbjct: 185 TAFITVGFLLLATTTGSFDFASFKGAGAALPELVKSLAFVLFLIGFGTKAGIMPLHVWLP 244 Query: 233 RAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVL 292 AHPAAPS+ SALMSGVMVK I+ +++ + L WWG+LV+ + ++SA+LGVL Sbjct: 245 YAHPAAPSNVSALMSGVMVKTAIYMLIRCIFEFLGVA--DTWWGLLVLLVASLSAVLGVL 302 Query: 293 YALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFK 352 +AL E D+KRLLA+STVENVGIIL+A+G +MV +S L + L+ ALFH NH+LFK Sbjct: 303 FALNETDLKRLLAYSTVENVGIILIAIGASMVFVSYGLKELAALALIAALFHAFNHSLFK 362 Query: 353 GLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQ 412 LLF+GAG+++ +HT ++E MG LAKRMPWT +G L+ISAIPPLNGF+SEW +Q Sbjct: 363 ALLFMGAGSVLYAVHTKNIELMGGLAKRMPWTGVFFFVGALSISAIPPLNGFVSEWLIFQ 422 Query: 413 SLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPN 472 SL + +++ P+ + MLA+TG LA CFV+ YGI F APR+ HA EA++VP Sbjct: 423 SLLLSFNFPEMIVKILIPVTIGMLALTGALAAACFVRAYGIAFLAAPRTEHAAEAKDVPV 482 Query: 473 TMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPS 532 TM+ M +LA LCV+ L + ++ P I + T A+ + ++ + S Sbjct: 483 TMLAGMAILAVLCVVTGLMSVFIVPAIDSVTATIIGTSVASKMTYGIVMEPVVTSFSGMS 542 Query: 533 LLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFS 592 L + L + LLP +Y + GD W CG + +G + + ++FS Sbjct: 543 PLAIGALMIVLLPAVYLITRYYGGRRKIVLGDTWDCGTRLSHRNEYTGTAYAKSINMIFS 602 Query: 593 ALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDF 652 A++R ++L + ++ A TEP +++ + P+ +LA+ + +Q+G Sbjct: 603 AIYRPSKELVARPTASPYISKELTYADHTEPLFEKYLYNPLAGFVVKLARRLSFIQTGSI 662 Query: 653 RLYCLYVVAALVVLLIAIA 671 + Y Y+ LV+LLI Sbjct: 663 QAYLTYIFITLVLLLIIFR 681 >UniRef50_Q609T5 Hydrogenase subunit n=1 Tax=Methylococcus capsulatus RepID=Q609T5_METCA Length = 748 Score = 444 bits (1142), Expect = e-123, Method: Composition-based stats. Identities = 224/667 (33%), Positives = 359/667 (53%), Gaps = 8/667 (1%) Query: 11 LILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAPPFEF 70 + + L A L ++ GV + +G+ QLHA + + + Sbjct: 84 IPVPLRPKPAVGHHRRLPHAWRRMVFALLTASGVSSLGAGLLQLHADAAVSGQLPFGLPW 143 Query: 71 ADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNI-FIASMVALL 129 +R+D+LSAF ++V+ L V+ +Y Y R++ G+ + F+A M +L Sbjct: 144 LHWHVRLDTLSAFFLVVLGLGVIAAGVYGPGYTRQFAGQYSFGALGLFTGSFVAGMEGVL 203 Query: 130 VMDNAFWFIVLFEMMSLSSWFLVIARQDKTS-INAGMLYFFIAHAGSVLIMIAFLLMGRE 188 + D+A+ F++ +E M++SS+FLV+ + + S A LY + G++ I++AF ++ Sbjct: 204 IADDAYLFVIAWEAMTVSSYFLVVYQHEHASHRRAAFLYLLMGEVGAIAIILAFGILAAA 263 Query: 189 SGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSG 248 S S F ++R ++P +A FLLA GFG KAG++PLH+WLP AHPAAP+H S LMSG Sbjct: 264 SHSFAFDAWRDAHVTPAWGTAAFLLALAGFGMKAGLVPLHAWLPEAHPAAPAHVSGLMSG 323 Query: 249 VMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWST 308 VM+KI ++G+L+ A DLL + +WG +V+ +G SA LG+LYA+ + D+KRLLA+S+ Sbjct: 324 VMLKIAVYGLLRFAFDLLGD--VQWYWGAIVLGLGTGSAALGILYAVVQSDLKRLLAYSS 381 Query: 309 VENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHT 368 +EN+GI+ + +G+ MV + L ++GL+ AL+H+LNH+LFK LLFL AG+++ + H Sbjct: 382 IENMGIVFMGLGLCMVFIGKGHVQLGLIGLVAALYHVLNHSLFKNLLFLAAGSVVHQTHR 441 Query: 369 HDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSR-VEAVALQL 427 HD+E MG L KRMP TA L G +AI+ +PPLNGF+SEW T+Q+ + ++ L+ Sbjct: 442 HDLEHMGGLIKRMPVTAGLFLAGSVAIAGLPPLNGFVSEWLTFQAALQAASVIDNGILRS 501 Query: 428 AGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVP-NTMIVAMLLLAALCV 486 +A +LA T +A CFVK+YG+ F G PR + A EV + M+ A +LA LC+ Sbjct: 502 MVSVAAAILAFTAAVAAACFVKLYGVAFLGQPRERRSAHAHEVSHSGMLWAPAMLAGLCL 561 Query: 487 LIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPG 546 L+ + +W+ + I + ++ L L+LLAM L Sbjct: 562 LLGVLPTWVLDAMRPITRQLLGETLTSASARGWLWLTPGGVSTASYSAPLVLLAMALAWW 621 Query: 547 LYWLWCRSRRAAFRRTGDAWACGY-GWENAMAPSGNGVMQPLRVVFSALF-RLRQQLDPT 604 L R AA R AW CG+ G M + QP+R +F+ ++ + T Sbjct: 622 LLRRLERRGPAADVRRAPAWDCGFGGLSPRMQYTAAAFAQPVRRIFAPVWETVETSTPET 681 Query: 605 LRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALV 664 N + + P+ + LA++ +Q+G R+Y Y L+ Sbjct: 682 AAANPLQVTALSYRLEIGDRSWRWLYLPLTRVVEDLARQTARIQTGQVRIYIAYSFMTLI 741 Query: 665 VLLIAIA 671 VLL ++ Sbjct: 742 VLLGVVS 748 >UniRef50_B1ZSE3 NADH dehydrogenase (Quinone) n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZSE3_OPITP Length = 683 Score = 443 bits (1140), Expect = e-122, Method: Composition-based stats. Identities = 241/669 (36%), Positives = 361/669 (53%), Gaps = 13/669 (1%) Query: 14 YLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGV----TLVARFAPPFE 69 Y + +L + +RLA + + + G+++ + L GV P F Sbjct: 17 YAAGVVLALLCVRRERLAALVGFGAPALAALAGLVAALRLLLGGVGAPLPRFEFIPPLFP 76 Query: 70 FADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKG-AAAMGFFMNIFIASMVAL 128 F LT+R+D+L AF ++V SL + S+YS+ + G+G + N + + + Sbjct: 77 FLTLTVRVDALGAFFLVVSSLAGLAISIYSIGAAKGLAGRGNVGVLAALFNALLLATALV 136 Query: 129 LVMDNAFWFIVLFEMMSLSSWFLVIA-RQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGR 187 + + + F+ +E+M+L+++ LV + + AG+LYF ++H + +++ LL+ + Sbjct: 137 FMAGDLWLFLGAWELMALTAYGLVSFAHEQPETRRAGVLYFIMSHLDAACVVLGLLLLFQ 196 Query: 188 ESGSLDFASFRTLS--LSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASAL 245 SGS F S + ++PG A F+L GFG KAG++PLH WLP AHP APS+ SA Sbjct: 197 ASGSTSFDSLHAIGGHMAPGKRDAAFVLFLLGFGIKAGIVPLHIWLPAAHPVAPSNVSAF 256 Query: 246 MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLA 305 MSGV++K GI+G+++V+ D L P WWG+ V+ IG +SA+LGVLYAL E D+KRLLA Sbjct: 257 MSGVLIKSGIYGLIRVSFDFLGTP--PGWWGMTVLVIGTVSAVLGVLYALMEHDLKRLLA 314 Query: 306 WSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISR 365 + ++EN+GIIL+ VG +++ L L + L+ L+H +NHA FKGLLFLGAGA++ Sbjct: 315 YHSIENIGIILMGVGTSLLFLHSGHTALATLALIAGLYHTINHATFKGLLFLGAGAVLHA 374 Query: 366 LHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVAL 425 HTH+ME+MG LAKRMP TA LIG +AISA+PPLNGF+SEW T+QSL Sbjct: 375 THTHNMEEMGGLAKRMPQTAFCFLIGAVAISALPPLNGFVSEWLTYQSLLQGFDASQSLE 434 Query: 426 QLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALC 485 +L P++ MLA+TG LA CFVK YG+TF PRS A AQE + M +L C Sbjct: 435 RLVLPLSGAMLALTGALAAACFVKAYGVTFLAQPRSEAAAHAQEAGPMLRFGMAVLVVAC 494 Query: 486 VLIALSASWLAPKIMHIAHAFTNT--PPATVASGIALVPGTFHTQVTPSLLLLLLLAMPL 543 VL+ L + + + + T + ++ T S L L+LLA+ L Sbjct: 495 VLLGLFPTTVIRLLDPVTQLLTGQQLSGQLSLANGLVLTSLTEKTGTISTLGLVLLAIGL 554 Query: 544 LPGLYWLWCRSRRAAFRRTGDAWACGY-GWENAMAPSGNGVMQPLRVVFSALFRLRQQLD 602 LP + L R R W CG G M + G +P+R++F ALF R+ + Sbjct: 555 LPIPFVLRWVLARNTRTRRAPTWDCGLRGLTPQMEYTATGFSKPIRMIFKALFLPRRDVQ 614 Query: 603 PTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAA 662 + A E ++ RP+ R ++ I+ LQ+G Y LY+ Sbjct: 615 REYDFSPHFATKLQFESHVEEVFESHFYRPVRLQILRASRRIRTLQAGSIHAYLLYMFVT 674 Query: 663 LVVLLIAIA 671 LV LL+ Sbjct: 675 LVALLLFAR 683 >UniRef50_C7MLM1 Formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit n=3 Tax=Bacteria RepID=C7MLM1_CRYCD Length = 672 Score = 443 bits (1140), Expect = e-122, Method: Composition-based stats. Identities = 291/660 (44%), Positives = 407/660 (61%), Gaps = 4/660 (0%) Query: 1 MDALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTL 60 M A L S++ +LAS+ + + + + + +V + GI +G + G Sbjct: 1 MSATTLFLTSVVFSCVGALASILAMRNQQASKVIGCVFGMVSALFGIAAGCQAIV-GTAE 59 Query: 61 VARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNI 120 + PF FA+ +L ++ LS ++LVIS+L +Y L Y EY+G+G MGFFMN+ Sbjct: 60 WSSVVTPFSFANFSLLLNPLSGLLMLVISVLAFAAWIYGLNYFDEYKGQGLGTMGFFMNL 119 Query: 121 FIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMI 180 FIASM ++ +DNA WF+V FE+MSL+S+FLVI Q++TSI G LY +AH G LIMI Sbjct: 120 FIASMGFVICVDNALWFLVFFELMSLTSYFLVIVEQNETSIKGGFLYLIMAHIGFFLIMI 179 Query: 181 AFLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPS 240 AF +M +GS +F +FRT + SP ++S VF+L F GFG KAGM+P HSWLP+AHPAAPS Sbjct: 180 AFFVMAGLTGSFEFQAFRTSAFSPVISSLVFVLCFIGFGCKAGMIPFHSWLPQAHPAAPS 239 Query: 241 HASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDI 300 + SALMSG M+KIG+FG++KV +DLL + + LWWGILV+ GA+S++LGV+YALAE DI Sbjct: 240 NVSALMSGGMIKIGVFGMVKVGLDLLQSSPVELWWGILVLLFGAVSSVLGVVYALAEHDI 299 Query: 301 KRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAG 360 KRLLA+ +VEN+GIILL VG+ +G+++ +P++ V+G L +HL NHA+FKGLLFLGAG Sbjct: 300 KRLLAYHSVENIGIILLGVGIGFIGVAVGNPIVAVLGFLAGFYHLFNHAMFKGLLFLGAG 359 Query: 361 AIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRV 420 +++ T +MEKMG LA+ MP TA LIG LAISAIPPLNGF+SEW+T+QS+F+ + Sbjct: 360 SVLYSTGTRNMEKMGGLARVMPVTAMCFLIGSLAISAIPPLNGFVSEWFTYQSMFTAAFA 419 Query: 421 EAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLL 480 ++L A V LA+TG LAV CFVK YG+TF APRS A AQEVP M AM L Sbjct: 420 GDAVIRLFAAFAAVSLAITGALAVTCFVKAYGVTFLSAPRSDVARNAQEVPGPMKFAMGL 479 Query: 481 LAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLA 540 +A +CV + L A W+AP + HIA A P V +G+A V + V+ L+ +LL+ Sbjct: 480 IAFICVCMGLGAPWVAPIMQHIAEATVQAPSLGVTAGLANVNVSTAGVVSTPLIAVLLIG 539 Query: 541 MPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQ 600 + L L + D WACGY M + + L+ R Sbjct: 540 LVGLA--IGLRALFDKGGVDEREDPWACGYHPNAHMPVIATSFASQVNMFLGPLYTARDV 597 Query: 601 LDP-TLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYV 659 + R A+ E D+ ++ ++ ++Q ++ GDFRLY LY+ Sbjct: 598 FSRQSDRATALFNGTVEGAKRIEGIPDKYLVDAPARFVNWISAKVQKIEGGDFRLYILYI 657 >UniRef50_Q0F380 NADH dehydrogenase subunit N n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F380_9PROT Length = 633 Score = 431 bits (1108), Expect = e-119, Method: Composition-based stats. Identities = 224/635 (35%), Positives = 335/635 (52%), Gaps = 4/635 (0%) Query: 39 SLVGGVIGIISGITQLHAGVTLVARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLY 98 L + + G Q + + R+D LSAF +LVI L++ ++Y Sbjct: 1 MLAISGLSAMIGGIQGLLTEPTSLILPLGLPWLPMHFRVDGLSAFFLLVIGTLLLPVAIY 60 Query: 99 SLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDK 158 S Y++ K A+ F+ +F+ M+ +++ D+AF F++ +EMMS+SS+FLV ++ Sbjct: 61 SQGYLKGE--KRLGALAVFLPLFVLGMLGVVIADDAFTFMLFWEMMSVSSYFLVTFEHER 118 Query: 159 -TSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFG 217 + AG +Y +AH +LI+ F ++ SGS +F+ R L P A+A FLL FG Sbjct: 119 LENRKAGFIYLLMAHLAGLLILGGFAVLYAASGSFEFSVMRAAHLFPFWATAAFLLVAFG 178 Query: 218 FGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGI 277 FG KAG++P+H WLP AHP APS+ SALMSG+M+K+ +FG L+V DL+ WWG Sbjct: 179 FGTKAGVVPMHGWLPDAHPVAPSNVSALMSGIMLKVAVFGFLRVVWDLIGPGDFQWWWGA 238 Query: 278 LVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVG 337 LV+ G+ SA+ GVL+AL + D+KRLLA+ ++EN+GIIL+ +G+ M+ PLL +G Sbjct: 239 LVLTAGSASAVSGVLFALQQHDLKRLLAYHSIENIGIILIGLGLGMLLAHFGHPLLAALG 298 Query: 338 LLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISA 397 L+ L+H +NHALFKGLLF+GAGA++ T DME MG L RMP TA L+ C++ISA Sbjct: 299 LIAGLYHTINHALFKGLLFMGAGAVLHVTGTRDMETMGGLIHRMPATALFFLVACVSISA 358 Query: 398 IPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCG 457 +PP NGF+SEW T+Q+ ++ L P + MLA+ G LA CFVK++G+ F G Sbjct: 359 LPPFNGFVSEWLTFQTALMAPQLGGALLTAIVPFSAAMLALAGALAAACFVKVFGVVFLG 418 Query: 458 APRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASG 517 RS H A EV M + M + A LC+L+ L P + I + + Sbjct: 419 HARSEHVAGAHEVDGWMKLGMAIPALLCLLLGLLPVMFIPLMDAIPASLLHVSLGAHLYE 478 Query: 518 IALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWEN-AM 576 + T S + LA L G W + R G W+CG + M Sbjct: 479 HGWLWLTPVDATHASYSAPVALAGMLGVGGLVYWWLHPKGCRIRRGALWSCGNPHIHARM 538 Query: 577 APSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSA 636 + QPLR +F+ + R + + +K L + +P+ Sbjct: 539 QYNATAFSQPLRRIFAGVLRPEEHIHVERPAHKLLTRRVRYTVHVGDPAVRHLYQPLARL 598 Query: 637 TQRLAKEIQHLQSGDFRLYCLYVVAALVVLLIAIA 671 T LAK ++H Y + A ++ LL+A A Sbjct: 599 TLGLAKRVRHEHQRGIHAYLAWTFATILFLLVAFA 633 >UniRef50_B8I2P9 NADH/Ubiquinone/plastoquinone (Complex I) n=2 Tax=Clostridium RepID=B8I2P9_CLOCE Length = 688 Score = 430 bits (1107), Expect = e-119, Method: Composition-based stats. Identities = 232/682 (34%), Positives = 363/682 (53%), Gaps = 15/682 (2%) Query: 3 ALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGIT--QLHAGVTL 60 L ++LY+ +L SL + + +LS +L+ + I V+ Sbjct: 6 IAVLFIICIVLYMTGALTSLASYSSPKWSNRLSNSFALLASSLLTFLMIYKLIYSRDVST 65 Query: 61 VARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREY-EGKGAAAMGFFMN 119 F F + +DSLSAF +++IS++ V+ SL+S TYM Y K + G N Sbjct: 66 KLDFNTNIPFLSIEFNIDSLSAFFIMIISIVAVIVSLFSYTYMSHYFSKKNISVFGCLYN 125 Query: 120 IFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDK-TSINAGMLYFFIAHAGSVLI 178 +FI SMV L+ N F+V +E+MSL S+FLVI +K AG +Y + + G+V I Sbjct: 126 LFIVSMVLLVASSNMLLFLVFWELMSLISFFLVIYEHEKDEVQKAGRIYIIMTYIGTVCI 185 Query: 179 MIAFLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAA 238 M AF+L+ +GS + +S S+ G A+ +FLL GFG KAG++P+H WLP AHP A Sbjct: 186 MAAFVLIAAYTGSFNLSSINPQSIPHGSANIIFLLLLVGFGTKAGIIPVHIWLPYAHPVA 245 Query: 239 PSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQ 298 PS+ SALMSGVM+K+ I+G+ + ++L +GL WWG+ V+ IG SAL+G+ Y++A Sbjct: 246 PSNISALMSGVMIKMAIYGLFRFIFNILPVSGL--WWGVAVLCIGIASALIGIAYSVAST 303 Query: 299 -DIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFL 357 +IKRLLA+S++EN+GIIL +G+ M+ + + L + L L H LNHA+FK LLF+ Sbjct: 304 TNIKRLLAYSSIENMGIILAGIGMMMIARASENYPLLSLSLTATLLHTLNHAVFKSLLFM 363 Query: 358 GAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSL 417 GAG I HT +MEK+G L K+MP + IGCL+ISA+PP NGFISE+ ++++ S Sbjct: 364 GAGTIQYSTHTKNMEKLGGLIKKMPAASVFIFIGCLSISAVPPFNGFISEFMIFRTIISS 423 Query: 418 SRVEAVALQLAGPIA----MVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNT 473 A + + LA+TG L CFVK +GI+F G PRS AE A+E Sbjct: 424 ISYFAPSENFLLVVILMVAAAALALTGALVAFCFVKFFGISFLGMPRSLKAESAKEPGKP 483 Query: 474 MIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGI--ALVPGTFHTQVTP 531 M+ A+ A LC+L+ + + I + N + ++ ++ Sbjct: 484 MLAALASAAVLCLLLGILPKYAIRLIDGVGSQLINIKMLATDWSLLSPQYYPVGNSSLSI 543 Query: 532 SLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGY-GWENAMAPSGNGVMQPLRVV 590 S L +L + L L + R+ + W CG+ M S G + LR++ Sbjct: 544 SSGLTAILLVLLGGLLLVVVMALRKRTSVERYNTWDCGFTKLNPKMQYSATGFSKSLRII 603 Query: 591 FSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQH-LQS 649 F F+ + L+ T + ST F+++ + PI+S + +++I+ +Q+ Sbjct: 604 FRGFFKPGRDLEITEGIAPYHIKEGKYTTSTVRFFEKYLYVPIISTIIKFSRKIRFTVQT 663 Query: 650 GDFRLYCLYVVAALVVLLIAIA 671 G Y +Y A+V++L+ + Sbjct: 664 GSIHAYLMYFFVAMVLMLLYYS 685 >UniRef50_C8PJ79 ATP-binding protein n=1 Tax=Campylobacter gracilis RM3268 RepID=C8PJ79_9PROT Length = 657 Score = 428 bits (1102), Expect = e-118, Method: Composition-based stats. Identities = 216/657 (32%), Positives = 353/657 (53%), Gaps = 15/657 (2%) Query: 13 LYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAPPFEFAD 72 L++ +++ S+ L + A+K+ + + + + + V + Sbjct: 7 LFIVSAVISILLYCAPKTAVKVGFGLGAISCFYAMCHFVANMGVSDSFVLGGTFLYAP-- 64 Query: 73 LTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGK-GAAAMGFFMNIFIASMVALLVM 131 + L F V+ + S+Y ++Y EY GK N FI SM+ ++ Sbjct: 65 -KFALSPLGNFFSFVVVFIGFASSVYGMSYAEEYIGKANIGVFACLFNTFILSMLLVISA 123 Query: 132 DNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGS 191 DN F F VL+E+M+L S FL+I K ++ A M+Y IA G+ I L++ +GS Sbjct: 124 DNVFCFAVLWELMTLISSFLIIVNDGKGTLKAVMVYLGIAQIGAFCITCGLLIIANYAGS 183 Query: 192 LDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMV 251 +FA + +++ G + A F+L GFG+KAGM P H WLP+AHPAAPS+ SALMSGVM+ Sbjct: 184 FEFAEWGKVNMPMGASVAAFILFLVGFGSKAGMWPFHVWLPQAHPAAPSNVSALMSGVMI 243 Query: 252 KIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVEN 311 K+ +F ++K + L L +++G+ V+ +GA S+L GVLYAL + D K LLA+ +VEN Sbjct: 244 KVALFTLVKFTLFL----PLSIYFGLAVLILGAASSLFGVLYALCQHDFKALLAYHSVEN 299 Query: 312 VGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDM 371 +GIILL +G + G++ + L VG L +H++NHA+FKGLLFL AG++I HT +M Sbjct: 300 IGIILLGLGTGIYGVAAGNVTLAAVGFLAGCYHVVNHAIFKGLLFLCAGSVIHATHTQNM 359 Query: 372 EKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPI 431 + +G LAK+MP TA IG + I+A+PP+NGF+SEW+T+Q + ++ + ++ A + Sbjct: 360 DVLGGLAKKMPLTAVGMFIGIMGIAALPPVNGFVSEWFTYQGMLQGAKESGIFIRYAFSL 419 Query: 432 AMVMLAVTGGLAVMCFVKMYGITFCGAPRSTH-AEEAQEVPNTMIVAMLLLAALCVLIAL 490 A+V LA+TG L M +K+Y + F G PR E A+E P M++ M++L CV + Sbjct: 420 AVVALALTGVLVGM-HLKLYAVIFAGTPRDEKIWENAKESPLGMVLGMIILMIGCVGFGV 478 Query: 491 SASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWL 550 A ++ IM ++ T+ + G + + + V+ L+ ++L + LLP + Sbjct: 479 GAHFIVDYIMQAVNSITSNREFVASLGASSITSPLGSIVSTPLIAVILCSTMLLPFIILA 538 Query: 551 WCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKG 610 ++ R R D WACG+ + M +G LR + LFR G Sbjct: 539 VMKANRDKP-RETDPWACGFKYSPRMQMTGGPFTGDLRKIMDWLFRG----HKRRIEQNG 593 Query: 611 LAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLL 667 + W + +P++ ++++A +I +QSG LY LY++ L +L Sbjct: 594 YFGPIEYHNHPQDIWWTMIYQPVIDWSKKVADKIGIIQSGYANLYTLYILIYLCAVL 650 >UniRef50_D0WGR4 Hydrogenase subunit n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WGR4_9ACTN Length = 675 Score = 427 bits (1099), Expect = e-118, Method: Composition-based stats. Identities = 290/669 (43%), Positives = 419/669 (62%), Gaps = 4/669 (0%) Query: 4 LQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVAR 63 + +L S+ + + +LFL A ++ + + ++ +++G + G Sbjct: 3 MTILLASIAVSVIGGFLALFLGKSAHAAKVVACLFGMGSALLAVLAGFQGVI-GQGACLS 61 Query: 64 FAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIA 123 A PF FAD TL ++ ++ ++ +I++L LY L+Y EY+ G AMG FMN+FIA Sbjct: 62 VATPFSFADFTLLLNPIAGLLLAIINVLAFAAFLYGLSYFDEYKENGLGAMGLFMNLFIA 121 Query: 124 SMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFL 183 SM L+V DNAFWF+V FE+MSL+S+FLV+ Q K SI G +Y +AH G ++IMI++ Sbjct: 122 SMNVLVVADNAFWFLVFFELMSLTSYFLVVVEQKKQSIKGGFMYLVMAHVGFLMIMISYF 181 Query: 184 LMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHAS 243 +M ++GS +FA++R P L S F+LAFFGFG KAGM+P HSWLP+AHPAAPS+ S Sbjct: 182 IMASQTGSFEFAAYRVHDFGPALGSLAFVLAFFGFGCKAGMVPFHSWLPQAHPAAPSNVS 241 Query: 244 ALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRL 303 ALMSG M+KIG+FGI+KV +DLL+ T LWWG+LV+ +GA+S++LGV+YAL E DIK+L Sbjct: 242 ALMSGGMIKIGVFGIIKVGLDLLSGTDCMLWWGLLVLVVGAVSSVLGVVYALGEHDIKKL 301 Query: 304 LAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAII 363 LA+ +VEN+GIILL VG+A VG+++ P L + LL ++H+LNHA+FKGLLFLGAG+++ Sbjct: 302 LAYHSVENIGIILLGVGLAFVGVAMDQPALAGLALLAGIYHMLNHAMFKGLLFLGAGSVL 361 Query: 364 SRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAV 423 T +MEKMG L MP TA LIG LAISAIPPLNGF+SEW+T+Q++FS + + Sbjct: 362 YATGTRNMEKMGGLIHAMPVTAMCFLIGSLAISAIPPLNGFVSEWFTYQAMFSAAFMGGT 421 Query: 424 ALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAA 483 ++ A V LAVTG LAV CFVK YG+TF G RS A +A+EVP +M +M++L+ Sbjct: 422 MIKAFAAFAAVALAVTGALAVTCFVKAYGVTFLGVGRSDAALKAKEVPASMTASMVILSI 481 Query: 484 LCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPL 543 +C+ + L A AP + +A + VASG A+ G + ++ L+ +LL+A Sbjct: 482 VCIFLGLGAPLCAPVLEGVAASVLGGSAVAVASGAAVTNGITDSVISTPLVAVLLIAAVF 541 Query: 544 LPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDP 603 + ++ RR D WACGY E M ++ V L+ R L Sbjct: 542 VALGIRSMFAKGGSSVRR--DPWACGYKSEGDMPVIATTFASEVKWVMGPLYAARDALVG 599 Query: 604 T-LRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAA 662 T + K + A+ E D+R++ P+ + R+AK Q +++GD RLY +Y+V A Sbjct: 600 TSPKFVKAFESLVGGAKVAETVGDKRLVDPVAAFVDRIAKLSQRIEAGDSRLYIVYIVVA 659 Query: 663 LVVLLIAIA 671 LV LLIA Sbjct: 660 LVALLIATV 668 >UniRef50_A5G8U2 NADH dehydrogenase (Quinone) n=13 Tax=Desulfuromonadales RepID=A5G8U2_GEOUR Length = 669 Score = 425 bits (1094), Expect = e-117, Method: Composition-based stats. Identities = 227/672 (33%), Positives = 344/672 (51%), Gaps = 16/672 (2%) Query: 2 DALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLV 61 D L+ L + + LFL KL+ + + G+ G ++ Sbjct: 10 DPAMLVAIGATLAALSGVPGLFLKDTPDTGQKLATALVALAALAGLSGAFIFFLHGTPVI 69 Query: 62 ARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAA-MGFFMNI 120 + F + +D LSA +L+I L+ + CS+Y+ Y + + + FF + Sbjct: 70 YTISCSLPFGPCEIGLDHLSAVFLLIIFLISICCSIYATGYWPAASNQRTSRKLTFFFGL 129 Query: 121 FIASMVALLVMDNAFWFIVLFEMMSLSSWF-LVIARQDKTSINAGMLYFFIAHAGSVLIM 179 A++V L++ ++ F++ +E+M+LS++F L AG++Y H G++ + Sbjct: 130 LTAALVLLVIARDSILFLMAWEVMALSAYFVLTTEDHKPEVREAGIIYMVATHTGTLALF 189 Query: 180 IAFLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAP 239 F L+ + S F++ ++ +P LA+A+F A FGFG KAG+MPLH WLP AH AP Sbjct: 190 AMFSLLKGAAASHQFSAMTAINPAPPLAAAIFCTALFGFGLKAGLMPLHIWLPSAHATAP 249 Query: 240 SHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQD 299 SH SA+MSGVM+K GI+GI++V P+WWGI ++ G +SA+LGV +AL + D Sbjct: 250 SHISAIMSGVMIKTGIYGIIRVLSFF---PQPPIWWGITLLVAGIVSAVLGVAFALGQHD 306 Query: 300 IKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGA 359 +KRLLA+ ++EN+GII + +GVA++G + PLLTV+G+ GAL H LNHALFK LLFLGA Sbjct: 307 LKRLLAYHSIENIGIIFMGIGVAVIGQATGQPLLTVLGMAGALLHTLNHALFKSLLFLGA 366 Query: 360 GAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSR 419 GA+I HT ++++MG LAK MPWTA L+G +AI +PPLNGF+SE+ + F Sbjct: 367 GAVIHATHTREIDRMGGLAKAMPWTAILFLLGAVAICGLPPLNGFVSEYLIYLGFFGGVN 426 Query: 420 VEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAML 479 + A +A LA+ G LAV CFVK++GI F GA RS E Q+ M M+ Sbjct: 427 TVSGPAVPAMALAAPSLALVGALAVACFVKVFGIVFLGARRSREIEPLQDAGWPMRAPMI 486 Query: 480 LLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLL 539 LL ALCV+I L +A + +++ T T + + P + + +L L Sbjct: 487 LLGALCVIIGLFPQLVARLLQPTIYSWAPTLVITGQTIPSAAPLGW-------ITVLGLA 539 Query: 540 AMPLLPGLYWLWCRSRRAAFRRTGDAWACGY-GWENAMAPSGNGVMQPLRVVFSALFRLR 598 + L L + + R + T W CGY M S + + + +F+ R Sbjct: 540 LLTLGGLLAFDFYRRIKQETVGTSGTWGCGYLKPSPRMQYSASSFAEMIVKLFAGALRP- 598 Query: 599 QQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLY 658 + + A E I P A I+ LQ G LY LY Sbjct: 599 --HVEKPDITGPFPQRSRFASHVPEAVLELGIVPFFKAVDERFATIRRLQHGQLHLYILY 656 Query: 659 VVAALVVLLIAI 670 V L +LL+ Sbjct: 657 VFITLCLLLVWA 668 >UniRef50_B1ZSD9 NADH dehydrogenase (Quinone) n=2 Tax=Bacteria RepID=B1ZSD9_OPITP Length = 662 Score = 421 bits (1082), Expect = e-116, Method: Composition-based stats. Identities = 212/664 (31%), Positives = 336/664 (50%), Gaps = 17/664 (2%) Query: 12 ILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAPPFEFA 71 IL LFA++A + + A + +L+G ++G L +G R Sbjct: 5 ILLLFAAIAFAGAIAVAWRAPRAWLGFTLLGAAAAFVAGARVLVSGAAWDWRSTWVLGGE 64 Query: 72 DLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMG-FFMNIFIASMVALLV 130 +L +R+D++SAF +++++++ S+YS Y + +A G + + +A+M A+LV Sbjct: 65 NLHVRLDAVSAFFLVLLAVVGGAASVYSREYWSDRAHPRSARSGRAWWTLLLATMGAVLV 124 Query: 131 MDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAG-MLYFFIAHAGSVLIMIAFLLMGRES 189 N F++ +E+ ++S +FL+ + + + A LYF +HAG++ + F L+ + Sbjct: 125 AANGLHFLIAWELFAVSGYFLITRERQRREVRAAGWLYFAASHAGTLCLFGFFTLLAART 184 Query: 190 GSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGV 249 GS D + + + +F LA GFG KAG+ PLH WLP AH APSH SA++SGV Sbjct: 185 GSWDLGAMQ----DRRELAPLFWLALVGFGVKAGLFPLHIWLPSAHANAPSHVSAILSGV 240 Query: 250 MVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTV 309 +K+GI+G+++ + L +P+ G ++ +G SA+LGV +AL + D+KRLLA+ +V Sbjct: 241 ALKMGIYGLVRFSGWL----PVPVAAGWVIALLGVASAVLGVAFALGQHDLKRLLAYHSV 296 Query: 310 ENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTH 369 EN+GIIL+ +G A+V + +P + L G L H+ NH LFK LLFLGAG+++ T Sbjct: 297 ENIGIILIGLGFALVATANGEPAWGRLALAGGLLHIWNHGLFKALLFLGAGSVLHATGTR 356 Query: 370 DMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAG 429 +M ++G L + MPWTA +G +AIS +PPLNGF+SEW + LF + + A Sbjct: 357 EMSRLGGLWRTMPWTAGCFTLGAVAISGLPPLNGFVSEWLVFLGLFDAAGAGGLPAWAAV 416 Query: 430 PIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIA 489 P A ++L +TG LA+ CF K+ G+ F G PRS AE A E M MLLLAA CV I Sbjct: 417 P-AAILLGMTGALALACFAKVCGVVFLGLPRSAVAEHAHESGPLMRGPMLLLAACCVAIG 475 Query: 490 LSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLL--LLAMPLLPGL 547 L+ + P + H A+ VA + + P L + L L Sbjct: 476 LAPVFFWPALAHAIDAWRPAWSGAVALANDAGGARLNPEQAPLAALGACHVALAGLGVVL 535 Query: 548 YWLWCRSRRAAFRRTGDAWACGYGWE-NAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLR 606 W+ R R W CGY M + + L FS + R + ++ R Sbjct: 536 AWVLWRQVRRNGVTRFMTWDCGYAAPTPRMQYTAGSFAEILTGWFSWILRPQAHVE---R 592 Query: 607 LNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVL 666 T E VI P+ ++ ++ LQ G + Y LY+ +V + Sbjct: 593 PVGPFPKRAEHRVHTPETVLEFVIEPVGRVVLAISGAVRRLQHGRLQFYILYLFVGVVAI 652 Query: 667 LIAI 670 + Sbjct: 653 ALLA 656 >UniRef50_A7GWM7 ATP-binding protein n=4 Tax=Epsilonproteobacteria RepID=A7GWM7_CAMC5 Length = 655 Score = 420 bits (1079), Expect = e-115, Method: Composition-based stats. Identities = 208/659 (31%), Positives = 353/659 (53%), Gaps = 17/659 (2%) Query: 13 LYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAPPFEFAD 72 L++ +++ S+ L G + A+K+ S + + + + + + Sbjct: 7 LFVVSAVISILLYGAPKAAVKVGFGLSALSCFYAMCHFVANMGMNDSFTLIGDFLYAP-- 64 Query: 73 LTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGK-GAAAMGFFMNIFIASMVALLVM 131 + L F V+ + S+Y ++Y EY K + FI SM+ ++ Sbjct: 65 -KFALTPLGNFFSFVVVFIGFASSVYGMSYADEYVKKANVGVFACLFSTFILSMLLVISA 123 Query: 132 DNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGS 191 DN F F+VL+E+M+L S FL++ K ++ A M+Y IA G+ I L++ +GS Sbjct: 124 DNVFCFVVLWELMTLVSSFLILVNDGKNTLKAVMVYLGIAQIGAFCITCGLLIIAYYAGS 183 Query: 192 LDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMV 251 +F++F + + G ++ F+L GFG+KAGM P H WLP+AHPAAPS+ SALMSGVM+ Sbjct: 184 SEFSAFMNVKMPMGASATTFILFLVGFGSKAGMWPFHVWLPQAHPAAPSNVSALMSGVMI 243 Query: 252 KIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVEN 311 K+ +F ++K + L L +++G+ ++ +GA S+L GVLYAL + D K LLA+ +VEN Sbjct: 244 KVALFTLVKFTLYL----PLSVYFGLAILILGAASSLFGVLYALCQHDFKALLAYHSVEN 299 Query: 312 VGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDM 371 +GIILL +G + GL+ + L +G L +H++NHA+FKGLLFL AG++I HT +M Sbjct: 300 IGIILLGLGTGIYGLAAGNMTLAAIGFLAGCYHVVNHAIFKGLLFLCAGSVIHATHTQNM 359 Query: 372 EKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPI 431 + +G LAK+MPWTA IG + I+A+PP+NGF+SEW T+Q + + +++ ++ A + Sbjct: 360 DILGGLAKKMPWTAVGMFIGIMGIAALPPVNGFVSEWLTYQGMLQGAMGDSILVRYAFTL 419 Query: 432 AMVMLAVTGGLAVMCFVKMYGITFCGAPRSTH-AEEAQEVPNTMIVAMLLLAALCVLIAL 490 ++V LA+TG L M +K+Y + F G PR E A+E P M++ M++L CV + Sbjct: 420 SVVALALTGVLVGM-HLKLYAVIFAGTPRDKKIWENAKESPIGMVLGMVVLMIGCVGFGV 478 Query: 491 SASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWL 550 A+ + IM ++ T + G + + V+ L+ ++L + +LP + Sbjct: 479 GANVIVDYIMKAVNSIT-VSGYDASLGSTAITSPLGSVVSTPLIAIILCSTMILPFIILA 537 Query: 551 WCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKG 610 ++ R+ R D WACG+ + M +G LR + LF+ +++ + Sbjct: 538 VMKANRSKP-RETDPWACGFKYSPRMQMTGGPFTGDLRKIMEWLFKGNKKVV-----TRN 591 Query: 611 LAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLIA 669 + W + P++ + A +I +QSG +Y LY++ L +L Sbjct: 592 YFDAIEYHNHPKDIWWGMIYEPVIKWCMKFADKIGIVQSGYTNVYTLYILVYLCAILAI 650 >UniRef50_B2V8R6 NADH dehydrogenase (Quinone) n=1 Tax=Sulfurihydrogenibium sp. YO3AOP1 RepID=B2V8R6_SULSY Length = 662 Score = 417 bits (1073), Expect = e-115, Method: Composition-based stats. Identities = 202/617 (32%), Positives = 331/617 (53%), Gaps = 11/617 (1%) Query: 60 LVARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMN 119 + F F + ++D+LS F V ++SLL S+YS++Y++E+E + N Sbjct: 51 FIVSFQSVIPFLTFSYKVDNLSLFFVGLVSLLSFASSIYSVSYIKEFENQKVLTF--LYN 108 Query: 120 IFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDK-TSINAGMLYFFIAHAGSVLI 178 +FI SM+ +++ N F++ +E+MS+ S+ LVI K ++NAG+ Y F+ H G+ I Sbjct: 109 LFIFSMIMVILSANVPTFLIWWEIMSVVSFLLVIFDYKKQENLNAGIFYIFMTHLGTTFI 168 Query: 179 MIAFLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAA 238 +I+F+L+ SGSL+F F ++L + VFL + GFG KAG+ LH WLP+AHP A Sbjct: 169 IISFILLYIYSGSLEFKDFVNVNLPEDVKFLVFLTSLIGFGTKAGIFLLHFWLPKAHPVA 228 Query: 239 PSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQ 298 PS+ SALMSGVM+K I+ +++ + L +P+ +G +V+ IGA+SA+ G+LYA + Sbjct: 229 PSNVSALMSGVMIKTAIYMLIRFYFEFLKD--MPVAFGYIVLFIGALSAIYGILYAYVQT 286 Query: 299 DIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLG 358 DIK++LA+S++EN+GIIL+AVG+AM+ S H +L + + L+H LNH +FKGLLFLG Sbjct: 287 DIKKMLAYSSMENIGIILIAVGLAMIFKSSHVWILMGISFIAVLYHTLNHTVFKGLLFLG 346 Query: 359 AGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLS 418 AG+++ + HT +ME++G L K MP T LIG L I+A+PP NGF+SEW +QSL S Sbjct: 347 AGSVLFKTHTKNMEELGGLNKIMPKTGILFLIGILGITALPPFNGFVSEWLIYQSLLFGS 406 Query: 419 RVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAM 478 ++ + P+ +LA+TG A+ F K+YG F G R+ ++A E M+ M Sbjct: 407 KLNYEFISFTMPLFASVLALTGAFALGSFAKLYGTVFLGIGRTDKVKKASESDGFMLTGM 466 Query: 479 LLLAALCVLIALSASWLAPKIMHIAHAFTNTPPA-TVASGIALVPGTFHTQVTPSLLLLL 537 LA + V++ L I + + + L+ + +L Sbjct: 467 GFLAFMVVILGLIPILPVYVIDEVLKQTASFSIYNYIIYKNGLLLISTDYDFGRISTSIL 526 Query: 538 LLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWEN---AMAPSGNGVMQPLRVVFSAL 594 +A ++ + + R R + WACG G N S +G QP+R + S + Sbjct: 527 AIAGIVIFVITYFLIRKIGNGNVREYETWACGLGESNLTVKAQYSASGFSQPIRRILSFV 586 Query: 595 FRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRL 654 +++++ L K ++ + + + K +Q G + Sbjct: 587 YKIKESLS--FSGKKYFLPKKTYKLEIIDRIEDLALSLTDIFIKIVLKVRYFIQPGIIHV 644 Query: 655 YCLYVVAALVVLLIAIA 671 Y Y++ L+ + Sbjct: 645 YIAYIILTLIAFIFYAV 661 >UniRef50_B6AS28 NADH dehydrogenase (Quinone) n=3 Tax=Leptospirillum RepID=B6AS28_9BACT Length = 686 Score = 416 bits (1070), Expect = e-114, Method: Composition-based stats. Identities = 221/669 (33%), Positives = 349/669 (52%), Gaps = 16/669 (2%) Query: 2 DALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLV 61 L L L ++ L G + A LS + L+ ++ I+G+ L V Sbjct: 10 TPLFLAELGLAGWILLGALGAVLAGHGKKASALSFGSLLLPALLASIAGVDILIHPVPQT 69 Query: 62 ARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIF 121 + L +D LS F + V+ + + L+++ + R+ + + F++ +F Sbjct: 70 RDLPFGWPGIPFRLALDPLSGFFLAVLGFVSIPVLLFAIGFFRDDSVRKTRWVLFWLPLF 129 Query: 122 IASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTS-INAGMLYFFIAHAGSVLIMI 180 + +M +L+ D+ F+V +E M+LSS+FLV+ + AG LY +A G+ LI++ Sbjct: 130 LGTMSGVLLADDVLTFLVFWEGMALSSFFLVVTDISEEGVRKAGFLYLLMAQIGTGLILL 189 Query: 181 AFLLMGRESG------SLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRA 234 +F L+ S SL FA L +SPG+A VF L+F GFGAKAG++PLH WLP A Sbjct: 190 SFFLLADGSSPDGGLSSLAFADLSRLPVSPGIAGWVFFLSFAGFGAKAGIVPLHVWLPEA 249 Query: 235 HPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYA 294 HP APS SALMSG+M+KI ++G+++V + LL + L + G+ V+AIG++SAL GVL+A Sbjct: 250 HPVAPSPVSALMSGLMLKIALYGMIRVDLGLLGVSHLQPFMGVAVLAIGSLSALFGVLHA 309 Query: 295 LAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGL 354 L + D KRLLA+ ++EN+GIIL+ G+ ++ + P+ V +LFH+LNHALFK L Sbjct: 310 LVQHDPKRLLAYHSIENIGIILIGFGLFLIFRTTGHPVPAAVAFSASLFHVLNHALFKSL 369 Query: 355 LFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSL 414 LFLGAG I+ + THD+ +G L + MP T+ L+G LAIS +PPLNGF+SEW T+Q+ Sbjct: 370 LFLGAGTILKKTGTHDLNDLGGLFRTMPATSFLFLVGALAISGLPPLNGFLSEWLTFQAA 429 Query: 415 FSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTM 474 + Q A ++ +LA++ L MCFVK+ G++F G RS A +E Sbjct: 430 LFAPSLSTFLFQSAVVLSAALLALSSALTAMCFVKVTGVSFFGQARSVRASLVREDRGFE 489 Query: 475 IVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLL 534 + AM +LA C+ + L S + + ++ + T P A + + Sbjct: 490 LSAMAILALGCLGLGLFPSPVLSGLSSVSLSLTGQPLPFDAEKDPWLWLVPVSSSRAQYS 549 Query: 535 LLLLLA--MPLLPGLYWLWCRSRRAAFRRTGDAWACGYG-WENAMAPSGNGVMQPLRVVF 591 LLLLA + +L L+ R RT W CGY + M + + QP+R F Sbjct: 550 PLLLLASFLAVLAILHLRAVLGRSQRPVRTAPTWNCGYPVRTSRMQETADAFGQPVRHFF 609 Query: 592 SALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGD 651 + FR+ + L + + + + P+VSA ++ + +++ Sbjct: 610 APFFRMERHLPSPGDDRP------SYHLEVRDPFWKGLYDPLVSALLCVSDAAETIRNRR 663 Query: 652 FRLYCLYVV 660 Y LY V Sbjct: 664 ISHYLLYSV 672 >UniRef50_B9XHI6 Proton-translocating NADH-quinone oxidoreductase, chain L n=2 Tax=Verrucomicrobia RepID=B9XHI6_9BACT Length = 636 Score = 416 bits (1069), Expect = e-114, Method: Composition-based stats. Identities = 150/686 (21%), Positives = 277/686 (40%), Gaps = 75/686 (10%) Query: 3 ALQLLTWSLILYLFASLASL----FLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGV 58 ++ W ++ S+A + + R++ ++S +V ++ I ++G Sbjct: 5 PIEKFAWLILFLPLVSVALISLIPGIKSRPRVSAQISIAAVVVCFLLTSILYFVLQNSGQ 64 Query: 59 TLV-----ARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAA 113 + D+ L++D+LS M+L+++ + + ++S YM+ G + Sbjct: 65 QQFPQITATWLQVDYLRIDIGLKLDALSMMMMLIVTGVGGLIHIFSWEYMKGDPG--YSR 122 Query: 114 MGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKT-SINAGMLYFFIAH 172 +++FI SM+ +++ DN + +E++ +SS+ L+ ++ + +A F Sbjct: 123 YFACLSLFIFSMLGIVMADNFLMMFIFWELVGISSYLLIGFWYERPSAADACKKAFLTNR 182 Query: 173 AGSVLIMIAFLLMGRESGS-LDFASFRTLSLSP-----GLASAVFLLAFFGFGAKAGMMP 226 G ++ LL+ G L+F + + G+A+A LL F G K+ P Sbjct: 183 LGDFGFLVGILLVWATLGHRLNFDALKQYLDKHTLEFAGVATAAGLLVFCGAAGKSAQFP 242 Query: 227 LHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAI 285 LH WLP A P+ SAL + MV G++ + ++ L ++ IG I Sbjct: 243 LHVWLPDAM-EGPTPVSALIHAATMVAAGVYMLCRIYFLL---DVSGSHALEVIAWIGGI 298 Query: 286 SALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHL 345 +ALL + A+ + DIKR+LA+ST+ +G +++AVG G A+FHL Sbjct: 299 TALLAAVIAIQQNDIKRILAYSTLSQLGYMVMAVG--------------THGPTPAMFHL 344 Query: 346 LNHALFKGLLFLGAGAIISRL-HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGF 404 HA FK LLFLGAGA+I + H ++ KMGAL K+MP T IG LA++ PPL+GF Sbjct: 345 TTHAFFKALLFLGAGAVIHAVHHEQNIWKMGALRKKMPTTFVTFTIGTLALAGCPPLSGF 404 Query: 405 ISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHA 464 S+ ++ + L ++ + F GAPRS A Sbjct: 405 YSKDGILGQAMETHHYG----------LFILGLLAAILTTFYMFRLVFVAFYGAPRSEAA 454 Query: 465 EEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGT 524 + A E P + +++LA + + F VAS + + Sbjct: 455 DHAHEAPGMLKWPLIILAVFSFIGGV-----IGIEGVYGKFFEPEKVEHVASWVDGIMAP 509 Query: 525 FHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVM 584 + + +L + + W + + G Sbjct: 510 INDSPLAAAFGILAFLAGIAAAFAFYWNKMVDPLPEKLG--------------------- 548 Query: 585 QPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEI 644 L + F + + L A ++R T+ + + + Sbjct: 549 -FLSRLMRNKFYFDEFYEHVLIPCTQEALAKLANGIDRWIIGGFMVRGTQGTTEFIGRAL 607 Query: 645 QHLQSGDFRLYCLYVVAALVVLLIAI 670 + +Q+G + Y +VA + ++L I Sbjct: 608 RLVQTGSLQTYAFLLVAGVALVLYLI 633 >UniRef50_B5YKJ0 NADH-quinone oxidoreductase chain l n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YKJ0_THEYD Length = 630 Score = 412 bits (1060), Expect = e-113, Method: Composition-based stats. Identities = 134/692 (19%), Positives = 262/692 (37%), Gaps = 89/692 (12%) Query: 3 ALQLLTWSLILYLFASLA-SLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLV 61 + L+ L L L + + +G+ S++G ++ + I Q+ +G T+ Sbjct: 1 MEKYYILILLFPLAGFLFNILIGRFISPKVVSWAGVLSILGSLVVALFAIAQVFSGKTIE 60 Query: 62 ARFAPPFEF----ADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFF 117 +D L+A M+ V+ + + +YS+ YM + G + Sbjct: 61 YNIYTWILSDDLKVSFGYLIDQLTAVMLFVVCFVGWLIHIYSVGYM--HGDPGYPRYFAY 118 Query: 118 MNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKT-SINAGMLYFFIAHAGSV 176 +N+F+ SM+ L++ +N +E + L S+FL+ K + +AG F + G Sbjct: 119 LNLFVFSMLMLVMGNNLVMLYFGWEAVGLCSYFLIGFWYHKKTASDAGKKAFIVNRIGDF 178 Query: 177 LIMIAFLLMGRESGSLDFASFRTLSL------------SPGLASAVFLLAFFGFGAKAGM 224 + L+ +L++ + L + + LL F G K+ Sbjct: 179 GFALGIFLLFINVYALNYTDIFPKIPGLQGHTLNIFGWNIDLITLIALLLFCGAVGKSAQ 238 Query: 225 MPLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIG 283 +PLH WLP A P+ SAL + MV G+F + ++ G+ +V G Sbjct: 239 IPLHVWLPDAM-EGPTPVSALIHAATMVTAGVFMVARLNPIY----GMSEIALAVVAITG 293 Query: 284 AISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALF 343 A+++ AL ++D+KR++A+ST+ +G + + G+A +F Sbjct: 294 AVTSFFAATIALVQRDMKRIIAYSTISQIGYMFIGCGMA--------------AYGAGIF 339 Query: 344 HLLNHALFKGLLFLGAGAIISRL-HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLN 402 HL HA FK LLF+GAG+++ + D+ KMG L K+MP T LI L I+ IP + Sbjct: 340 HLYTHAFFKALLFMGAGSVMHAMAGELDIYKMGGLRKKMPITYITFLIASLTIAGIPGFS 399 Query: 403 GFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPR-- 460 GF S+ + F+ ++ ++ +T L ++ + F G R Sbjct: 400 GFFSKDEILWAAFASAKPYGK-------FIWLLGTITAALTAFYTFRILFVAFHGKFRGT 452 Query: 461 STHAEEAQEVPNTMIVAMLLLAALCVLIALS--ASWLAPKIMHIAHAFTNTPPATVASGI 518 + E P M V +++LA V++ +L P I A + Sbjct: 453 PEEFKHVHESPPIMTVPLIVLAIGSVIVGYFSIPHFLEPVIPKPVFAAPHEQERV----- 507 Query: 519 ALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAP 578 ++ + ++A + + R Sbjct: 508 --------------VMTMSIIAGVTGILIAGYIYIVKSTVSARLAKT------------- 540 Query: 579 SGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQ 638 + V + + + + + E ++ I Sbjct: 541 -----FSGVYKVLWNKYYVDELYSFLFVKPTLWIAEKFIERFADIKIIEGIVNGIPKLIY 595 Query: 639 RLAKEIQHLQSGDFRLYCLYVVAALVVLLIAI 670 + I+ +Q+G + Y ++++A +++ ++ I Sbjct: 596 KTGLLIRPIQTGQLQQYAIFMIAGIIIFVLII 627 >UniRef50_Q11VC3 NADH dehydrogenase I chain L n=5 Tax=Bacteroidetes RepID=Q11VC3_CYTH3 Length = 636 Score = 411 bits (1058), Expect = e-113, Method: Composition-based stats. Identities = 154/689 (22%), Positives = 283/689 (41%), Gaps = 73/689 (10%) Query: 3 ALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVA 62 ++ + L L L + ++++ G I+ + AG L A Sbjct: 1 MMEFVWLIPALPLLGFLILSLFNKHIPKSASGYIASAMMLGSFAIVLTLLCKAAGGDLTA 60 Query: 63 RFAPPFEFAD-------LTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMG 115 F++ L+ ++D+LS + + +I+ + + +YS++YM ++ +G Sbjct: 61 TTVTVFDWIHVGDLKLALSFQIDNLSVWFMSIITGVGFLIHVYSISYM--HDDEGVTRYF 118 Query: 116 FFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSIN-AGMLYFFIAHAG 174 ++N+F+ SM+ L++ N +E + L S+ L+ + N A F + G Sbjct: 119 SYLNLFVFSMLLLVMGSNYVVMFTGWEGVGLCSYLLIGFWFKNQAYNDAAKKAFIMNRIG 178 Query: 175 SVLIMIAFLLMGRESGSLDFASFRTLSL-------SPGLASAVFLLAFFGFGAKAGMMPL 227 + ++ LL+ + SL+++ +L G+ A+ +L F G K+ +PL Sbjct: 179 DLGFLLGMLLIYNQFKSLEYSVVFDQALKIINPNEPSGIIFAITMLLFVGAMGKSAQIPL 238 Query: 228 HSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAIS 286 ++WLP A A P+ SAL + MV GI+ I + + + ++ +G + Sbjct: 239 YTWLPDAM-AGPTPVSALIHAATMVTAGIYMIARSNILY----SMAPCTLDIIYVVGTGT 293 Query: 287 ALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLL 346 A+L L L + DIK++LA+STV +G + +A+G+ G +FH+ Sbjct: 294 AILAALIGLTQTDIKKVLAYSTVSQLGFMFMAIGLG--------------GYSAGVFHVT 339 Query: 347 NHALFKGLLFLGAGAIISRL-HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFI 405 HA FK LLFLGAG++I + D+ KMG L K++P T +I LAI+ IPPL GF Sbjct: 340 THAFFKALLFLGAGSVIHAMGGEQDIRKMGGLMKKLPITFITFIIATLAIAGIPPLAGFF 399 Query: 406 SEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRS--TH 463 S+ F S P+ + L +M +TF G R Sbjct: 400 SKDAILALAFESS-----------PLKWGLGVFAALLTTFYMFRMLFLTFFGEFRGTTHQ 448 Query: 464 AEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPG 523 E E P M + +++LA L V+ H +N +A +P Sbjct: 449 KEHLHESPLLMTIPLMVLALLTVVSGFIEIP-----HVFVHEGSNWFSHYLAGANIALPA 503 Query: 524 TFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGV 583 H +L+ + ++ + + Y + + PS Sbjct: 504 ASHLSAETEFVLMGSALVLVVLVIITTYVL----------------YVSKKTLPPSSEAE 547 Query: 584 MQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKE 643 + + + F + + D + + E + +R++ + Q K Sbjct: 548 LSFIDKLSYNKFYVDELYDTIIVKPIAFLSD-FTSTFIEKQFIDRIVNFSGKSVQWSGKT 606 Query: 644 IQHLQSGDFRLYCLYVVAALVVLLIAIAV 672 I+++QSGD Y +++V +VV+L V Sbjct: 607 IRYIQSGDVNTYAIFMVIGIVVILFINLV 635 >UniRef50_Q1IS43 Proton-translocating NADH-quinone oxidoreductase, chain L n=4 Tax=Bacteria RepID=Q1IS43_ACIBL Length = 676 Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats. Identities = 136/699 (19%), Positives = 251/699 (35%), Gaps = 72/699 (10%) Query: 4 LQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGI--ISGITQLHAGVTLV 61 L L L+ A++ L + + ++ + + V Sbjct: 5 LHLWIIPLLPLAGAAINGLLGKRFPNKLVATIALFFTAASFGYFCYVASQFVHLSQIPHV 64 Query: 62 ARFAPPFEFADLTL----RMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFF 117 + + + +D L+ M+ V++ + + +YS YM G + Sbjct: 65 ESYGTWIQVGSFKVEFGAYLDQLTLIMLGVVTGVGFLIHVYSAGYMEHEGG--YYRFFAY 122 Query: 118 MNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDK-TSINAGMLYFFIAHAGSV 176 +N+F+ M+ L++ + V +E + L+S+ L+ K ++ AG F G Sbjct: 123 LNLFMFFMLTLVLGSSYLLMFVGWEGVGLASYLLIGFFFRKHSAAQAGKKAFITNRVGDF 182 Query: 177 LIMIAFLLMGRESGSLDFASFRTLS------LSPGLASAVFLLAFFGFGAKAGMMPLHSW 230 +I L+ + +L + + GL +A+ + G K+ +PL+ W Sbjct: 183 GFLIGLFLIIQNWNTLQYTEVFKAASGYGVETHAGLFTAIGICLLIGACGKSAQIPLYVW 242 Query: 231 LPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALL 289 LP A P+ SAL + MV G++ + + +LV IGA +A+ Sbjct: 243 LPDAM-EGPTPVSALIHAATMVTAGVYMVTRSNAIF----SRSPHALLLVACIGAATAIF 297 Query: 290 GVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHA 349 + + DIKR+LA+ST+ +G + LA GV +FHL+ HA Sbjct: 298 AATIGITQTDIKRVLAYSTISQLGYMFLACGVG--------------AYASGVFHLMTHA 343 Query: 350 LFKGLLFLGAGAIISRLH-THDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEW 408 FK LLFL AG++I + DM MG L K +PWT I I+ PPL F S+ Sbjct: 344 FFKALLFLAAGSVIHAVGGEQDMRNMGGLRKYIPWTFWVMTIATFTIAGFPPLAAFFSKD 403 Query: 409 YTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAE--- 465 ++S + V + + +T G+ + + +TF G R E Sbjct: 404 EILWKVWSSESLRPVVGEGFNKFLWAVGLITAGVTSFYMFRQWFMTFFGEYRGAKTEASH 463 Query: 466 ---------------EAQEVPNTMIVAMLLLAALCVLIALSA--SWLAPKIMHIAHAFTN 508 E E P MI +++LA L + + + Sbjct: 464 GHAPAHGAHDDHGHGEPHESPMIMIAPLVVLAILSFAGGWVGIHNKFDNFLSPVTKLQMA 523 Query: 509 TPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWAC 568 P+ S L+L++ + G W + + A A Sbjct: 524 NAPSAEESATPHEEHGEEGGDKTELMLMIASVGMAVVGFGAAWYLYKAHPEKPGEMAKAA 583 Query: 569 GYGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDER 628 G L + + + + T+ L + + + + Sbjct: 584 G----------------GLYTMVLNKYYVDEFYGATIVKPILLFSTSVLWRGIDVAVIDG 627 Query: 629 VIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLL 667 ++ + Q ++ ++ +QSG+ R Y +V V++ Sbjct: 628 LLNGSAAGAQETSQGVRRMQSGNIRSYAGWVAVGAAVVI 666 >UniRef50_A9EX64 NADH dehydrogenase (Ubiquinone) n=3 Tax=cellular organisms RepID=A9EX64_SORC5 Length = 854 Score = 411 bits (1056), Expect = e-113, Method: Composition-based stats. Identities = 155/757 (20%), Positives = 264/757 (34%), Gaps = 130/757 (17%) Query: 6 LLTWSLILYLFASLA-SLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLH-AGVTLVAR 63 LL L L + LF L + A++L + +L G + ++ L G L Sbjct: 15 LLAVILGLPALGAFVNGLFGKRLGKDAVRLMALAALGGAFLAAVTTFLMLPHEGGKLTWT 74 Query: 64 FAPPFE---------FADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAM 114 F D+ +D LS M+LVI+ + + LYS YMRE G Sbjct: 75 AWRWFSITGRMGQSIPIDVAFSVDGLSGTMILVITGVGFLIHLYSSAYMREDPG--YYRF 132 Query: 115 GFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQ-DKTSINAGMLYFFIAHA 173 ++N+FI SM+ L++ DN V +E + + S+ L+ D + +AG F + Sbjct: 133 FAYLNLFIFSMLVLIMGDNLAVLFVGWEGVGMCSYLLIGFWFKDDKNASAGKKAFVVNRI 192 Query: 174 GSVLIMIAFLLMGRESGSLDFASFRTLSLSPG---------------------------- 205 G +++A ++ +G+L+F + + Sbjct: 193 GDFGLLVAMAMLAYYTGTLNFDGIAANAGNLLAAVKIWPIGNMSADTVPGFLSFLIPSQP 252 Query: 206 ----LASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILK 260 + L F G K+ +PL+ WLP A A P+ SAL + MV G++ + + Sbjct: 253 VLVYAGTLAALALFLGCAGKSAQIPLYVWLPDAM-AGPTPVSALIHAATMVTAGVYLVAR 311 Query: 261 VAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVG 320 ++ + L + +V G +AL L + D+K++LA+STV +G + + VG Sbjct: 312 LSAVFV----LSPFAMAVVAVTGVATALFAASIGLFQNDLKKVLAYSTVSQLGFMFIGVG 367 Query: 321 VAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLH--------THDME 372 V FH+L HA FK LFLGAG++I +H + DM Sbjct: 368 VG--------------AFAAGFFHVLTHAFFKACLFLGAGSVIHAMHARIHDTDQSQDMR 413 Query: 373 KMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSL--------SRVEAVA 424 MG L MP T L+ CL+I+ P GF S+ FS + Sbjct: 414 NMGGLKNHMPLTRWTFLLACLSIAGFPGFAGFWSKDEILWRAFSSRIESVSTRGQPVWQW 473 Query: 425 LQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRS----------------------- 461 + GP + + + + Y TF G R Sbjct: 474 PEWLGPAIYWVGILAATMTAFYMFRAYFQTFHGEFRGWTIVRGWKDPHPHGHHDDHHGHA 533 Query: 462 ----THAEEAQEVPNTMIVAMLLLAALCVLIALS---ASWLAPKIMHIAHAFTNTPPATV 514 E E P M + +++L AL V A P Sbjct: 534 HGEKLEGPEPHESPLPMTIPLIVLGALSVFAGFLMAEPLVHLTHNHAFAPLAHLLEPVFS 593 Query: 515 ASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWEN 574 + A+ + ++L + A L L ++R R G Sbjct: 594 LTERAVKAREGVEGLLFPMMLPGVAACFTGIFLAMLVYWNKRGEPERRFAESFPG----- 648 Query: 575 AMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIV 634 L + +R+ + + T+ + + D + + Sbjct: 649 ------------LYRLIYDKWRIDELYNATVVGMVDAIADI-FTMADKWIIDGIIAKLSA 695 Query: 635 SATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLIAIA 671 + ++ LQ+G ++Y +V L + + Sbjct: 696 ALVGFFGTVLRALQTGRVQVYAASMVIGLAGVGWFLV 732 >UniRef50_Q12F20 NADH dehydrogenase (Quinone) n=37 Tax=Betaproteobacteria RepID=Q12F20_POLSJ Length = 674 Score = 410 bits (1053), Expect = e-112, Method: Composition-based stats. Identities = 204/670 (30%), Positives = 328/670 (48%), Gaps = 11/670 (1%) Query: 3 ALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVA 62 L + ++ +L +A + L L ++ + + G VA Sbjct: 12 ILDWMLAVVLGWLIVGVAGVMALHRLALVSRVL-FPVGGLLGLALFGLAFGAVPGTPEVA 70 Query: 63 RFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFI 122 LR+DSLSA+ ++VI S ++ Y R+ EG + ++F+ Sbjct: 71 VLPIGLPDLPFHLRLDSLSAYFLMVIGAASAGISAFAAGYFRKGEGTSPGLLCLEYHVFL 130 Query: 123 ASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQD-KTSINAGMLYFFIAHAGSVLIMIA 181 ASMV +++ D+A+ F+V++E M+LSS+FLV A +AG LY +A G++ I++ Sbjct: 131 ASMVGVVLADDAYSFMVMWETMALSSFFLVTANHRIPEVRSAGYLYITMARIGAIAILLC 190 Query: 182 FLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSH 241 F ++ +G FA+ R + +P AS FLLA FGFGAKAG++PLH WLP AHPAAPS Sbjct: 191 FGVLQANTGDYTFANMRAQAPTPFWASLGFLLAVFGFGAKAGILPLHVWLPEAHPAAPSP 250 Query: 242 ASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIK 301 SALMSGVM+ I+G+++V+ DLL WWG L++A+G +AL GV++A + D+K Sbjct: 251 VSALMSGVMLNTAIYGLMRVSFDLLH--MRMWWWGGLLLAVGLATALFGVVFAAVQTDMK 308 Query: 302 RLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGA 361 RLLA+S++EN+G++ + +G+ ++ + + + + L+H+ +HA FK LLFLG G+ Sbjct: 309 RLLAYSSIENMGLLFVGIGLTLIFSAYDMNPMAALAMTATLYHVASHACFKSLLFLGTGS 368 Query: 362 IISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVE 421 ++ ++ K+G L + MPW LIG LA + +PPL GF+SEW QS + Sbjct: 369 VLHATSERNLGKLGGLIRTMPWVGWLTLIGVLASAGLPPLGGFVSEWLLLQSFLFTPSLP 428 Query: 422 AVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLL 481 L + P+ ++A+ LA VK +G+ F G PR A + I M+ L Sbjct: 429 LPLLTMLIPVVAALIALVAALAGYTMVKFFGVIFLGQPREGKLAGAHDAGRWEITGMVWL 488 Query: 482 AALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAM 541 A CV + L + I + + + + + ++ LL + Sbjct: 489 ALGCVALGLLPTQFIQLIDPVTQQLVASGLGAKVAAGGWLLAPNSLEQASYGPVIFLLGI 548 Query: 542 PLLPGLYWLWCRSRRAAFRRTGDAWACGYGW-ENAMAPSGNGVMQPLRVVFSALFRLRQQ 600 L +L R R G WACG+ W M + G QP+R +F F ++++ Sbjct: 549 LGSFALAYLLVRWLYHGRVRRGLPWACGFPWGNARMQDTAEGFGQPIRQIFEPFFLMQRE 608 Query: 601 LDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVV 660 L E + + PI LA+ I +Q G +Y LY Sbjct: 609 LPSPFDEQP------RYRVRVEDHFWRWLYVPIADLAAYLARLIGLMQQGRIAVYLLYSF 662 Query: 661 AALVVLLIAI 670 L+ L+A+ Sbjct: 663 LTLIATLLAV 672 >UniRef50_C0YTV8 NADH dehydrogenase I chain L n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YTV8_9FLAO Length = 637 Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats. Identities = 150/682 (21%), Positives = 281/682 (41%), Gaps = 65/682 (9%) Query: 3 ALQLLTWSLILYLFASLA-SLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLV 61 L+ ++L L L LF L ++ + + G +S ++ V Sbjct: 1 MENLVYAIVLLPLLGFLINGLFGKNLPKILVGSLATAVVFGSFCIAVSLFMNFNSESQPV 60 Query: 62 A-----RFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGF 116 F + ++D LS MV++I+ + + LYS+ YM KG Sbjct: 61 IVKAFEWFRVNGVQINFGFQIDQLSLMMVMIITGIGSLIHLYSIGYMSHD--KGFYKFFT 118 Query: 117 FMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQD-KTSINAGMLYFFIAHAGS 175 ++N+FI SM+ L++ N + +E + L S+ L+ + A F + G Sbjct: 119 YLNLFIFSMLLLVMGSNYLILFIGWEGVGLCSYLLIGFWYTNEEYGKAARKAFIMNRIGD 178 Query: 176 VLIMIAFLLMGRESGSLDFASFRTLS----LSPGLASAVFLLAFFGFGAKAGMMPLHSWL 231 + ++I ++ ++ ++D+ S + L + + F G K+ +PL++WL Sbjct: 179 LALLIGIFMIASQTNAVDYLSVAENASKFELDGTVIIFITASLFIGATGKSAQVPLYTWL 238 Query: 232 PRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLG 290 P A A P+ SAL + MV GI+ +++ L +++ IG ++A L Sbjct: 239 PDAM-AGPTPVSALIHAATMVTAGIYLVVRSNFLF----TLAPTVQGVILFIGFLTAALA 293 Query: 291 VLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHAL 350 YAL + DIK++LA+STV +G + +A+G+ A+FH++ HA Sbjct: 294 GFYALRQNDIKKVLAYSTVSQLGFMFIALGLG--------------AYTTAMFHVMTHAF 339 Query: 351 FKGLLFLGAGAIISRL-HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWY 409 FK LLFLGAG++I + + DM MG L K +P T A LIG LAIS P L+G IS+ Sbjct: 340 FKALLFLGAGSVIHAMSNEQDMRFMGGLKKYIPLTHATFLIGTLAISGFPLLSGMISKDE 399 Query: 410 TWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPR--STHAEEA 467 + F+ + P+ V+L V + ++Y +TF G R Sbjct: 400 ILVAAFAKN-----------PVYWVILFVLAAITATYMFRLYYLTFHGEFRGTEEQKHHL 448 Query: 468 QEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHT 527 E P+ M + +++LA L V+ H A P + + T Sbjct: 449 HESPSNMTLPLIVLAVLSVIGGFINLPHFIGHGHYAKLMEWLKPVLTEQSYSQMEATLSG 508 Query: 528 QVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPL 587 + ++LL + + ++++ + Y + MA + Sbjct: 509 VPFNTEMILLAATVIMFFSVWFIVRNT---------------YVKKKKMAVAEESYTGW- 552 Query: 588 RVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHL 647 + + + + + + + + + + +R + + + K ++ + Sbjct: 553 ERLSAKKLYVDELYNALIVKT--VEGLGRGGKMFDKGILDRFVNFVGDGAEDSGKAMKRV 610 Query: 648 QSGDFRLYCLYVVAALVVLLIA 669 Q+G+ Y L + A+ ++LI Sbjct: 611 QNGNVETYILIMSLAVGIILIV 632 >UniRef50_B8FUM3 NADH dehydrogenase (Quinone) n=3 Tax=Desulfitobacterium RepID=B8FUM3_DESHD Length = 637 Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats. Identities = 214/645 (33%), Positives = 329/645 (51%), Gaps = 20/645 (3%) Query: 30 LAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAPPFEFADLTLRMDSLSAFMVLVIS 89 I++ + + I I + ++ D L+AF +LV+ Sbjct: 6 RGIRVGTMGLSLMIAILGILFLGWNFHMDNFSGQWHGE------GFSCDGLTAFFLLVLL 59 Query: 90 LLVVVCSLYSLTYMREYEGKGAAAMGFF-MNIFIASMVALLVMDNAFWFIVLFEMMSLSS 148 L + SLY L YM++YEGK + F+ SM +L+++N F+F+ L+E+MSL S Sbjct: 60 LGQGIASLYGLGYMKDYEGKRSLLSFSLSWAAFLGSMAGVLIVNNGFYFLFLWELMSLFS 119 Query: 149 WFLVIARQDKTS-INAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRTLS--LSPG 205 + LVI +++S A +YF + H G+V ++ A L + ++GS + + ++ LSPG Sbjct: 120 FLLVIYEHEESSNRRAAFIYFVMTHVGTVFLIAAVLYLYSKTGSFLYGDWAAITPTLSPG 179 Query: 206 LASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDL 265 + +FL GFG KAG++P H WLP AHP APS SALMSGVMVKI ++ +++ Sbjct: 180 EKNGLFLCFLIGFGTKAGLVPFHIWLPYAHPVAPSPVSALMSGVMVKIALYMMMR--WVW 237 Query: 266 LAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVG 325 L + LWWG L++A+G +SA +G+LYA EQD+KRLLA+STVEN+GI+ +A+G AM+ Sbjct: 238 LTLAPMELWWGGLMLALGVLSAFIGILYACVEQDVKRLLAYSTVENMGILTMALGTAMIA 297 Query: 326 LSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTA 385 +L L V+ L +H ++H LFK LF+ AG II HT +++MG L K+MP T Sbjct: 298 RTLGYSDLVVLALAAFFWHGIHHLLFKSGLFMAAGNIIQATHTKRLDQMGGLLKKMPRTG 357 Query: 386 AACLIGCLAISAIPPLNGFISEWYTWQSLFSLS-RVEAVALQLAGPIAMVMLAVTGGLAV 444 ++G + +SA+PPL GF EW + +L+ S +VE +LA P+++ LA LA+ Sbjct: 358 LWAMVGAVGLSALPPLGGFWGEWLLFHALWKTSVQVEGGLFKLALPLSLAALAFISALAL 417 Query: 445 MCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAH 504 VK + F G RS +A AQE+P V+M + L +L L L I H Sbjct: 418 ATMVKWFAGAFLGQARSANAANAQELPWPQTVSMAMAMMLTLLATLYPQGLWKLISVPIH 477 Query: 505 AFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGD 564 +T + + +AL + +LLL L L + +R Sbjct: 478 VLKDTSDSPLTDSLALPLWADFFNLITPYILLLGLFSVTL-------YQLSARKRKRVAG 530 Query: 565 AWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPF 624 W CG M +G G+ PLR+ + R +D + T Sbjct: 531 TWNCGVPLTPRMQYTGLGITMPLRIALKKVLAFRPIIDKKFGETPYVLQSLHYRGRTREM 590 Query: 625 WDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLIA 669 +E RP + R A+ ++ LQ+G Y Y++ LVV+LI Sbjct: 591 TEEVFYRPAMKLLLRCAERVRILQTGSIHTYLAYILITLVVVLIW 635 >UniRef50_C0QBF3 HyfB n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QBF3_DESAH Length = 655 Score = 408 bits (1049), Expect = e-112, Method: Composition-based stats. Identities = 224/663 (33%), Positives = 338/663 (50%), Gaps = 21/663 (3%) Query: 4 LQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVAR 63 + L ++I++L ++ FL G + A + +L G V+ + + I + Sbjct: 1 MVLFAGAMIVFLAGAVFLPFL-GRSKRANTAGALFALAGSVMAMAASIDAITRDG-FDLV 58 Query: 64 FAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGK-GAAAMGFFMNIFI 122 F L LRMD LS F LVI L+ ++Y YM Y GK I Sbjct: 59 LPWKFLLGSLHLRMDPLSGFFGLVICLVSGFSAIYGARYMDAYAGKKHLGIAWSLYLILT 118 Query: 123 ASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSI-NAGMLYFFIAHAGSVLIMIA 181 ASM+ ++ N F++ +E+MS+SS+ LVI + + AG +Y H G+ L+++ Sbjct: 119 ASMMLVITAWNGVLFLIAWEIMSVSSFLLVIFEFQRPGVLKAGWIYLVATHLGTALLLVM 178 Query: 182 FLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSH 241 F++MG+ + F + S AS VF+LA GFG KAG++P H WLP AHPAAPSH Sbjct: 179 FMVMGKN----NAYDFNLVQASSTGASLVFILAVIGFGTKAGLLPFHVWLPEAHPAAPSH 234 Query: 242 ASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIK 301 SA+MS M+K GI+GI+++ M + WG ++ IGA++ + GV+ ALA+QDIK Sbjct: 235 VSAVMSAAMIKTGIYGIIRICMLIGPPKAS---WGWTLIIIGAMTGIFGVMSALAQQDIK 291 Query: 302 RLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGA 361 RLLA+S+VEN+GII + +G+ + LS P + +G+ G + H+LNHALFK LLF GAG+ Sbjct: 292 RLLAYSSVENMGIICIGLGLGFLALSTGHPFIGALGISGGMLHVLNHALFKSLLFFGAGS 351 Query: 362 IISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSL-SRV 420 ++ HT DMEKMG L K MP T +I A+ A+PPLNGFISE+ + FS Sbjct: 352 VLHSTHTRDMEKMGGLMKSMPVTGTTFVIASAAVCALPPLNGFISEFLIYFGAFSSLYAS 411 Query: 421 EAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLL 480 + LAG + +V LA+ GGLA+ CF K GI F G PRS+ A +A E P M + M++ Sbjct: 412 KGTFSVLAGILVIVSLALIGGLALACFSKAAGIVFSGHPRSSEARDAHESPLAMGIPMIV 471 Query: 481 LAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLA 540 LA LC+L+ + + + + N+ +T + + + L+ Sbjct: 472 LAGLCLLVGIFSPLVIDFFQPVFETVINSLGSTGFARL-----KSAAIPLTMISRAGLII 526 Query: 541 MPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWE-NAMAPSGNGVMQPLRVVFSALFRLRQ 599 + + L L + T W CGY M + + P+ +F A+ R+ Sbjct: 527 LATILLLAGLRRYLLKNRTIHTTGTWDCGYTAPTARMQYTASSFADPITGMFGAILGSRK 586 Query: 600 QLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYV 659 L L + R+ + + RP+ A +A LQ G +LY LY+ Sbjct: 587 DLKADTSLFPIFLSIKTRST---DLFMYLLYRPVFHAIAWVALRFHFLQRGYNQLYILYI 643 Query: 660 VAA 662 V Sbjct: 644 VIT 646 >UniRef50_B1WQD4 NADH dehydrogenase subunit 5 n=9 Tax=Cyanobacteria RepID=B1WQD4_CYAA5 Length = 682 Score = 407 bits (1046), Expect = e-112, Method: Composition-based stats. Identities = 146/742 (19%), Positives = 263/742 (35%), Gaps = 131/742 (17%) Query: 1 MDALQLLTWSLILYLFASLASLFLL--------GLDRLAIKLSGITSLVGGVIGIISGIT 52 M+ L W + + + L R A + I+ L ++ + + Sbjct: 1 MEPLYQYAWLIPVLPLLGAMVVGLGLISFNQVTNRLRQANAVFIISLLGASMVLSFALLW 60 Query: 53 QLHAGVTLVARFAPPFEFADLTLR----MDSLSAFMVLVISLLVVVCSLYSLTYMREYEG 108 G R + L+ +D LSA M ++++ + + +Y+ YM G Sbjct: 61 SQIQGHETYTRMIEWAAAGNFHLQMGYTLDHLSALMCVIVTTVAFLVMVYTDGYMAHDPG 120 Query: 109 KGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSIN-AGMLY 167 +++IF ASM+ L++ N + +E++ + S+ L+ D+ + A Sbjct: 121 --YVRFYAYLSIFSASMLGLVISPNLVQVYIFWELVGMCSYLLIGFWFDRKAAADACQKA 178 Query: 168 FFIAHAGSVLIMIAFLLMGRESGSLDFASFRT--------LSLSPGLASAVFLLAFFGFG 219 F G +++ L + +G+ +F ++P LA +L F G Sbjct: 179 FVTNRVGDFGLLLGMLGIYWATGTFEFDLMGERLESLVSSGMIAPALAGLFAVLVFLGPV 238 Query: 220 AKAGMMPLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGIL 278 AK+ PLH WLP A P+ SAL + MV G+F + ++ + Sbjct: 239 AKSAQFPLHVWLPDAM-EGPTPISALIHAATMVAAGVFLVARMYPVFEPIPTA----MTI 293 Query: 279 VMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGL 338 + GA+++ LG AL + DIK+ LA+ST+ +G +++A+G+ Sbjct: 294 IAWTGAVTSFLGATIALTQNDIKKGLAYSTISQLGYMVMAMGIG--------------AY 339 Query: 339 LGALFHLLNHALFKGLLFLGAGAIISRLH---------THDMEKMGALAKRMPWTAAACL 389 LFHL+ HA FK +LFL +G++I + DM MG L K MP T+ A L Sbjct: 340 TAGLFHLMTHAYFKAMLFLCSGSVIHGMEGVVGHDPVLAQDMRLMGGLRKYMPLTSLAFL 399 Query: 390 IGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVK 449 +G LAI IPP GF S+ F + P ++ T GL + Sbjct: 400 VGTLAICGIPPFAGFWSKDEILGLAFEAN-----------PALWLVGWFTAGLTAFYMFR 448 Query: 450 MYGITFCGAPRS---------------------------------------THAEEAQEV 470 MY +TF G R H++ E Sbjct: 449 MYFMTFEGDFRGNDMDIRNELSMAAAPVFGPGAMDVKELDHDTEDHGHDDHGHSDSPHES 508 Query: 471 PNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVT 530 P TM + +L+LA +I L +A V Sbjct: 509 PLTMTLPLLILAIPSTVIGLLGKPWDNTFESFIYAPGEVIEEATHFDWTEFGIMAGNSVG 568 Query: 531 PSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVV 590 +L+ + + ++ L +++ L Sbjct: 569 IALIGITIASLMYLQKKIDPKAIAKKYPA---------------------------LYQF 601 Query: 591 FSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSG 650 + + G + + + + + AT + +++L++G Sbjct: 602 SLNKWYFDDIYHKVFIM--GCRRLARQIMEVDYRVIDGAVNLTGLATLVSGEGLKYLENG 659 Query: 651 DFRLYCLYVVAALVVLLIAIAV 672 + Y L + A++ +I +V Sbjct: 660 RAQFYALIIFGAVLGFVIVFSV 681 >UniRef50_A7I7D4 NADH dehydrogenase (Quinone) n=3 Tax=Methanomicrobia RepID=A7I7D4_METB6 Length = 649 Score = 406 bits (1045), Expect = e-111, Method: Composition-based stats. Identities = 200/676 (29%), Positives = 338/676 (50%), Gaps = 33/676 (4%) Query: 1 MDALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTL 60 M L L LI A++A R++ LS + + ++ + L G+ Sbjct: 1 MQGLLFLIAILIFLAAAAIAFAGAARDSRISRLLSLACVVGASALLLLFALIVLVTGIPE 60 Query: 61 VARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGF-FMN 119 PF +T +D L+AF +++I + ++Y Y+ E EG G + Sbjct: 61 SIPAWQPFPGISVTFFIDRLAAFFLVLIGAVSACVAVYCTGYIEEMEGAGRRNILCGCTA 120 Query: 120 IFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDK-TSINAGMLYFFIAHAGSVLI 178 +F+ +M ++ F++ +E+M+ S+ LV+ + AG+ YF + ++ + Sbjct: 121 LFVFAMALVVASATTISFLLFWELMAAVSFLLVMYDYTGSETTRAGIFYFVMTQLSTLFV 180 Query: 179 MIAFLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAA 238 M+ +L+ +GS A + S L +A FL F GF KAG++P H WLP AHPA+ Sbjct: 181 MLGIILLFFATGSFAIAPAHVTAGSLPLVTAAFLALFVGFSVKAGIIPFHKWLPYAHPAS 240 Query: 239 PSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQ 298 PS SALMSGVM+K+ ++G+++ + + LWWG++++ G SA+LGV+YA+ E Sbjct: 241 PSPVSALMSGVMLKVAVYGLIRFLVAVFTPD---LWWGMVILIAGITSAVLGVIYAIKED 297 Query: 299 DIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLG 358 DIK LLA+S++EN+GII + +G+ ++ P+L + LL ALFH LNHALFK LLFL Sbjct: 298 DIKGLLAYSSIENIGIIFVGIGLFVIFSCTGLPMLATISLLAALFHSLNHALFKSLLFLT 357 Query: 359 AGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLS 418 +G+++ HT D+E+MG LA RMP T+A +G AI+A+PPLNGF SE + + F Sbjct: 358 SGSVVHATHTRDIEQMGGLASRMPVTSALFFVGAAAIAALPPLNGFASELLVYTAFFESV 417 Query: 419 RVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAM 478 V +++ + + + A+T L+ CFVK +G F PRS + EA+E M+ Sbjct: 418 TVADPLIKILLFVCLALFALTSALSAACFVKAFGSIFLARPRSQESREAREAGRAMLAGP 477 Query: 479 LLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLL 538 LLA CV++ + + + +I LLL+ Sbjct: 478 ALLAIACVVLGVFSYQILAGFGYI--------------------------FPIPDLLLVS 511 Query: 539 LAMPLLPGLYWLWCRSRRAAFRRTGDAWACG-YGWENAMAPSGNGVMQPLRVVFSALFRL 597 + + ++ L ++ + RT + W CG + +G+G +P+ +F+ L+R Sbjct: 512 VLLLVMGALTYIVLYVTASHAERTSETWGCGSLSLPASAEYTGHGFSEPIVTIFAPLYRT 571 Query: 598 RQQL-DPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYC 656 ++ + + + F++E + P+ R A + +Q+G Y Sbjct: 572 KKTVTKNYYDRHDCIVAGGTAEIRLVKFFEEYLYLPLARGANRAAGYVARMQNGCLDTYL 631 Query: 657 LYVVAALVVLLIAIAV 672 LYV A+V ++I + V Sbjct: 632 LYVFLAVVAVIIFLGV 647 >UniRef50_B0BZT2 Proton-translocating NAD(P)H-quinone oxidoreductase, chain L n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0BZT2_ACAM1 Length = 671 Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats. Identities = 140/672 (20%), Positives = 257/672 (38%), Gaps = 53/672 (7%) Query: 7 LTWSLILYLFASLA--SLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARF 64 + + L+ + A F L + +S +TS+ I + + G Sbjct: 4 FAYLIPLFPLIAFAVNLFFGHRLGSFSGWISVLTSVASSAIALPAAWVVAQGGQYSHEWL 63 Query: 65 APPFEF--ADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFI 122 + +D LSA ++ V++++ + +YS+ YM + K ++++F+ Sbjct: 64 WLTLGNYDLNFGYLLDPLSATLLFVVTVIGTLIQVYSIGYM--HGEKYYHRFFAYVSLFM 121 Query: 123 ASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKT-SINAGMLYFFIAHAGSVLIMIA 181 A+M+ L++ +N + + +E+M L S+ L+ K + NA F G V + + Sbjct: 122 AAMLTLVIANNYVQYFMAWEVMGLCSYLLIGFYFHKDSAANASRKAFLTTRVGDVGLFLG 181 Query: 182 FLLMGRESGSLDFASF-RTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPS 240 + + G+L F + L L F G K+ PLH WLP A P+ Sbjct: 182 IMTLFVTGGTLSFVDLPNAVETGAPLLWLAAPLIFCGTVGKSAQFPLHVWLPDAM-EGPT 240 Query: 241 HASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQD 299 SAL + MV G++ + + + + + W VM IG ++A + AL D Sbjct: 241 PVSALIHAATMVAAGVYLVARSFVLFTSFPMVMPW----VMGIGTLTAFMAAYIALTATD 296 Query: 300 IKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGA 359 IK++LA+ST+ +G ++ A+G+ G+ FHL+ HA FK LLFLGA Sbjct: 297 IKKVLAFSTISQLGYMVTAMGLG--------------GMTAGTFHLMTHAFFKALLFLGA 342 Query: 360 GAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSR 419 G++I H D+ ++G L +M T A +I LAI+ +PPL+GF S+ + Sbjct: 343 GSVIHGAHEQDIRQLGGLFSKMKHTGATFVIASLAIAGVPPLSGFWSKDEILLEAYQEGH 402 Query: 420 VEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAML 479 + +L +T + ++ +TF G R+ A E P M V + Sbjct: 403 F----------VVYGVLLLTAFMTAFYMFRLVFMTFFGKARNPEI-HAHESPALMTVPLW 451 Query: 480 LLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLL 539 LA + + + S V S + +L Sbjct: 452 CLAIGAIFVGIPGSPFMD------------NWFQTFLTGEHHAAAIDWMVMGSSIAAGVL 499 Query: 540 AMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQ 599 + L LY + A + ++ P + LF + Sbjct: 500 GIGLAAVLYLAKPQWPVAIANTFRPLYLLSVNQFWIDDIYSVLILNPFQAFGEFLFGFDR 559 Query: 600 QLDPTLRLNKGLA--HVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCL 657 + L + A ++ + + ++ T ++ Q+G + Y L Sbjct: 560 LVIDGLVNSSATAMQKMSKIQLWIDRNIVDGLVNLTGRGTVIGGDILKLFQTGSTQFYLL 619 Query: 658 YVVAALVVLLIA 669 +++ L Sbjct: 620 ITCVSVLAFLSV 631 >UniRef50_Q04YB3 NADH dehydrogenase (Ubiquinone), L chain n=7 Tax=Bacteria RepID=Q04YB3_LEPBL Length = 648 Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats. Identities = 151/686 (22%), Positives = 266/686 (38%), Gaps = 59/686 (8%) Query: 1 MDALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTL 60 M+ L+ + L L L S + + + + H Sbjct: 1 MEIANLIPALVALPLIGFLISGLFGKWLKGFTGIFSTGVVFLSFGLALVSFVLFHPMERT 60 Query: 61 VARFAPPFEFA-------DLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAA 113 + + L ++D LS +M L+I+ + + LYS+ YM++ G A Sbjct: 61 IPEIVAVLPWIETGGIQVSLAYQVDQLSLYMTLIITGIGSLIHLYSIGYMKDDPG--FAR 118 Query: 114 MGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKT-SINAGMLYFFIAH 172 ++N+FI +M+ L++ +N + +E + L S+ L+ K + NAGM F + Sbjct: 119 YFAYLNLFIFAMLNLVLAENLILLFLGWEGVGLCSYLLIGFDYHKESAANAGMKAFIVNR 178 Query: 173 AGSVLIMIAFLLMGRESGSLDFASFRTLSLSPG----LASAVFLLAFFGFGAKAGMMPLH 228 G + +++ L+ +GS+ F + L + + F G K+ +PLH Sbjct: 179 IGDLGMLLGIALVFWYTGSVSFTTIEGAILEIPSFRYILPVTAVCFFIGAIGKSAQLPLH 238 Query: 229 SWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISA 287 WLP A A P+ SAL + MV G+F I ++ L+ + W ++ IG+++A Sbjct: 239 VWLPDAM-AGPTPVSALIHAATMVTAGVFLIARLNPIFLSAPQVGHW----IVVIGSMTA 293 Query: 288 LLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLN 347 L + DIK++LA+STV +G + +A+G + LFHL+ Sbjct: 294 FFAATIGLFQNDIKKVLAYSTVSQLGYMFVAMGAG--------------AYVAGLFHLMT 339 Query: 348 HALFKGLLFLGAGAIISRL-HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFIS 406 HA FK LLFLG+G++I L H D+ MG L KRM T L+G LAIS IPP +GF S Sbjct: 340 HAFFKALLFLGSGSVIYALHHEQDLRNMGGLKKRMKITWITFLVGSLAISGIPPFSGFFS 399 Query: 407 EWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPR--STHA 464 + + ++ + + +T L +M + F G R S A Sbjct: 400 KDLILEKSYTYG-----------ALFYGLGIITALLTAFYMFRMTYLAFYGESRVSSDKA 448 Query: 465 EEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGT 524 E P M + +++L+ + + H TN GI + Sbjct: 449 LHLHESPLVMTIPLVILSIGATVTGFLEVP--HFLFGGVHILTNYFSPVFIRGIEISEQI 506 Query: 525 FHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVM 584 + + L + S R P G Sbjct: 507 IKQPLDVREVGTTNAIEFSLVAVSIAVAISGIFIARTLFLT--------GKNVPDDEGSH 558 Query: 585 QPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEI 644 ++ + S + + + ++ L A E + + ++R ++ + Sbjct: 559 TGVKRILSRKYYIDEFY-RNFIVDPILLLGKFLAGYVERNFLDLILRGTGRFAVAISLVL 617 Query: 645 QHLQSGDFRLYCLYVVAALVVLLIAI 670 + +Q+G Y + +V VV+L Sbjct: 618 RRVQTGIVVDYAILIVLGTVVILSFF 643 >UniRef50_D0LZ05 Proton-translocating NADH-quinone oxidoreductase, chain L n=6 Tax=cellular organisms RepID=D0LZ05_HALO1 Length = 801 Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats. Identities = 147/714 (20%), Positives = 250/714 (35%), Gaps = 73/714 (10%) Query: 1 MDALQLLTWSLILYLFASLASLFLLG----------LDRLAIKLSGITSLVGGVIGIISG 50 M L+ W +L L + +LF+ L R + + + +V + I Sbjct: 1 MQPQDLIFWIPLLPLLGATFNLFVGRVLWRWAFKKELPRGLVHFAAVLPVVLACVVSIVV 60 Query: 51 ITQLHAGV--------------------TLVARFAPPFEFADLTLRMDSLSAFMVLVISL 90 I + TL DL R+D+LS+ M+LVI+ Sbjct: 61 IFVGSGSLFAQFQAFDATGNNLLEGLHQTLYTWIEIGTLKIDLAFRVDTLSSVMLLVITF 120 Query: 91 LVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWF 150 + + +YS+ YM AA ++N+F SM+ L++ D+ + +E + L S+ Sbjct: 121 IGSLIHIYSIGYMEHEP--RYAAYFGYLNLFTGSMLILVLGDSLPVMFIGWEGVGLCSYL 178 Query: 151 LVIARQDKTS-INAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFR----------T 199 L+ ++T+ +AG F + G +I L+ + G LD+ R Sbjct: 179 LIGFWFNETANADAGRKAFVVNRVGDFSFLIGMFLLFQMVGGLDYEVLRSDTAMSIYDNA 238 Query: 200 LSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGI 258 +A L F G K+ +PL+ WLP A A P+ SAL + MV G++ + Sbjct: 239 FWGGERIAFWAGLFLFIGACGKSAQIPLYVWLPDAM-AGPTPVSALIHAATMVTAGVYMV 297 Query: 259 LKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLA 318 +++ I+V +GA++AL A A+ D K++LA+STV +G + + Sbjct: 298 ARLSFLY----ASSTTAMIIVSTVGALTALAAAFMAFAQTDFKKVLAYSTVSQLGFMFVG 353 Query: 319 VGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRL-HTHDMEKMGAL 377 VGV + +FHL+ HA FK LFL AG+++ + + D+ KMG L Sbjct: 354 VGVG--------------AYVAGVFHLITHAFFKAGLFLSAGSVMHAMSGSGDIMKMGGL 399 Query: 378 AKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLA 437 K MP T A ++ LAI I P GF S+ F +L Sbjct: 400 RKYMPRTHGAFVVYWLAICGIVPFAGFFSKDEILAGAF--FTTPQGWPPGYNYFLWAVLT 457 Query: 438 VTGGLAVMCFVKMYGITFCGAPR--STHAEEAQEVPNTMIVAMLLLAALCVLIALSASWL 495 + ++Y + F G R E P +M ++LLA L+ Sbjct: 458 LAALGTAFYMSRLYFLVFSGECRADEETKAHIHESPPSMTWPLILLAVGTALVGFIGLPH 517 Query: 496 APKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSR 555 I P+ V + L ++ + L Sbjct: 518 IEGIHLPTILADWLAPSLVRPDMEYAAVGQSLGGFVHAHSLGMVGGLMGLALVL-----G 572 Query: 556 RAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVT 615 +A G G ++ + + D L Sbjct: 573 ALGIFIGYKLYANGVDPRIERLTGEGGGLRGWFTWSKNKLYVDEAYDTVLVRPFRWIASA 632 Query: 616 ARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLIA 669 D + T + + +Q+G Y ++ + Sbjct: 633 IFEFVDRFVIDLIFVNGAAVVTDVFGRVSRWVQNGQVHRYMFALLLGSFAIFFL 686 >UniRef50_B8J1C9 Proton-translocating NADH-quinone oxidoreductase, chain L n=4 Tax=Bacteria RepID=B8J1C9_DESDA Length = 642 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 146/675 (21%), Positives = 255/675 (37%), Gaps = 73/675 (10%) Query: 18 SLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVT---LVARFAPPFEFADLT 74 ++ + A L +V I++ ++ + + Sbjct: 17 AVTLVCGRWWGSRAHWLPIAAIVVSLCCSILALRDVMNGVIVNADVHNWITSGNLSVSFG 76 Query: 75 LRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNA 134 +D L+A M++V++ + + +YS+ YM+ +G ++ +F SM+ L++ +N Sbjct: 77 FLVDQLTAVMLIVVTSVSTLVHIYSVGYMKGEDG--YYRFFAYLALFSFSMLMLVLSNNF 134 Query: 135 FWFIVLFEMMSLSSWFLVIARQDK-TSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLD 193 +E + LSS+ L+ +K ++ +AG F + G ++ + GSL Sbjct: 135 LQLFFGWEAVGLSSYLLIGFYYEKTSASDAGKKAFIVNRFGDFGFLLGLFCIFTLFGSLH 194 Query: 194 FASFRTLS------------LSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSH 241 + + + +S A+ V LL F G K+ +PLH WLP A P+ Sbjct: 195 YDNVFARAGLLQGLSYTIGGISIDAATLVCLLLFCGAAGKSAQLPLHVWLPDAM-EGPTP 253 Query: 242 ASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDI 300 SAL + MV G+F + + L ++ +GA++AL AL + DI Sbjct: 254 VSALIHAATMVTAGVFLVARCNALF----SLSPTALGVITVVGALTALFAATIALTQTDI 309 Query: 301 KRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAG 360 KR++A+ST+ + + + GV +FHL HA FK LLFLG G Sbjct: 310 KRVVAYSTISQLAFMFIGCGVG--------------AYAAGIFHLFTHAFFKALLFLGCG 355 Query: 361 AIISRL-HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSR 419 ++I + H DM +MG L K MP T L+ L+IS +P L GF S+ F+ Sbjct: 356 SVILGMHHEQDMRRMGGLRKYMPVTCVTFLLASLSISGVPGLAGFFSKDEILLMAFNADT 415 Query: 420 VEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHA--EEAQEVPNTMIVA 477 AG A + L +++ F G R T E +E P + + Sbjct: 416 T-------AGYFAWGVGTFVAFLTAFYSFRLFFSIFYGEFRGTQHQREHLRESPLVVTIP 468 Query: 478 MLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLL 537 +LLLA V + +N + + L+ Sbjct: 469 LLLLACGAVGAGWLG-------IPHVLGGSNLWAGFLEPVVGHPHLHLDGPAELMLMGAS 521 Query: 538 LLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRL 597 ++A GL W + R ++ L +F +R+ Sbjct: 522 VVAGVCGIGLAWFMYHRQTEWPERVVQSFPR------------------LYRLFLHKYRV 563 Query: 598 RQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCL 657 + L + + E V+ + A RL+ ++ Q G Y Sbjct: 564 DEIYAACLVRPVLWLADHVLLRVVDTKGIEGVVNGLPRAIGRLSVRLRRFQDGHVAHYLA 623 Query: 658 YVVAALVVLLIAIAV 672 ++ A VVLLI + + Sbjct: 624 WLAGASVVLLIVLQL 638 >UniRef50_Q1RKE6 NADH-quinone oxidoreductase subunit L n=15 Tax=Rickettsia RepID=NUOL_RICBR Length = 642 Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats. Identities = 137/689 (19%), Positives = 251/689 (36%), Gaps = 77/689 (11%) Query: 5 QLLTWSLILYLFASLA-SLFLLGLDRLAIKLSGITSL-VGGVIGIISGITQLHAGVTLVA 62 + ++L L ++L LF+ +D+ + + L + + +I G + Sbjct: 4 SIAIMIILLPLASALINGLFVRRIDKKLASIVATSFLSLSALFALIIFYHTGLNGHIIHI 63 Query: 63 RFAPPFEF----ADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFM 118 + P E D ++ +D L++ M + ++ + V +YSL YM KG F+ Sbjct: 64 KLLPWIEVSQFKVDWSIYIDQLTSIMFIAVTWVSSVVHIYSLGYMSRD--KGIVRFLSFL 121 Query: 119 NIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSI-NAGMLYFFIAHAGSVL 177 ++F M+ L+ DN +E + + S+ L+ K S A + F G Sbjct: 122 SLFTFFMLMLVSADNFLQLFFGWEGVGICSYLLIGFWYSKESANKAAIKAFIANRVGDFA 181 Query: 178 IMIAFLLMGRESGSLDFASFRTLSL------------SPGLASAVFLLAFFGFGAKAGMM 225 ++ + + S ++ L+ + LL F G K+ + Sbjct: 182 FILGVITIIFYCHSANYEDVFLLAPKLANTKILLADFEISILDIACLLLFIGCMGKSAQI 241 Query: 226 PLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGA 284 LH WLP A P+ SAL + MV G+F + + + + IG Sbjct: 242 GLHVWLPDAM-EGPTPVSALIHAATMVTAGVFLVARCSYLF----EYSPMVLQFITIIGG 296 Query: 285 ISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFH 344 I+ L A+ + DIK+++A+ST +G + +A GV+ +FH Sbjct: 297 ITCLFAASIAIMQNDIKKIIAYSTCSQLGYMFMACGVS--------------AYNSGIFH 342 Query: 345 LLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGF 404 L+ HA FK LLFL AG++I +H D+ KMG L +MP T LIG LA+ I PL GF Sbjct: 343 LVTHAFFKALLFLSAGSVIHAVHEQDIFKMGELRNKMPITYGNFLIGSLALIGIYPLAGF 402 Query: 405 ISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHA 464 S+ ++ +S + + L + +K+ + F G R Sbjct: 403 YSKDSILEAAYSSGS-----------FMFIFGILAAILTAIYSMKIIMLVFHGKTRLEKD 451 Query: 465 --EEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVP 522 E A E P M + LL A + +L + F ++ A + + Sbjct: 452 VFEHAHEPPKVMNNPLTLLVAGSFFSGMIGYYLLS-MDKPNGYFHDSLLNLHAYKLLITH 510 Query: 523 GTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNG 582 H ++ P ++ ++ + + + + R + Sbjct: 511 PPLHIKLLPMVVGIIGIVVGIYLYKSDVVMSFLRRQ---------------------ESS 549 Query: 583 VMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAK 642 + + + + + + + D + ++ Sbjct: 550 KDNYFTKILINKYYFDELYNFLIVKPINCLACLFYS-GDQKIIDRFGPNGFARSVNCFSR 608 Query: 643 EIQHLQSGDFRLYCLYVVAALVVLLIAIA 671 Q+G Y LYVV +VV + Sbjct: 609 LTGKTQTGYVFNYTLYVVLFVVVTISYFV 637 >UniRef50_B5EN60 Proton-translocating NADH-quinone oxidoreductase, chain L n=25 Tax=Proteobacteria RepID=B5EN60_ACIF5 Length = 660 Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats. Identities = 141/694 (20%), Positives = 252/694 (36%), Gaps = 72/694 (10%) Query: 3 ALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVA 62 L + + L +L + F R + I + ++ + Q G+T Sbjct: 12 PLAVYLVIPVAPLVGALVAGFWGWRLRDHAHWAPIIGVAIAFYLSLAVLWQTGHGITFYG 71 Query: 63 RFAPPF----EFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFM 118 + +DSL+A M++V++ + + LY++ YM + G A ++ Sbjct: 72 DVYTWAVLGHLPVSVGFDIDSLTALMLVVVTFVSLSVHLYTVGYM--HGDPGYARFFSYI 129 Query: 119 NIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSIN-AGMLYFFIAHAGSVL 177 +F SM+ L++ +N +E + L S+ L+ + S N A + F + G Sbjct: 130 ALFTFSMIMLVMSNNFLQLFFGWEAVGLVSYLLIGFWFQRESANVAAIKAFIVNRVGDFG 189 Query: 178 IMIAFLLMGRESGSLDFASFRTL-------------SLSPGLASAVFLLAFFGFGAKAGM 224 +I + GSLD+ + + + + LL F G K+ Sbjct: 190 FLIGIAAVYHYCGSLDYRTVFAAVPHLIGQTLEIIPGHPWSVLTWIALLLFVGAMGKSAQ 249 Query: 225 MPLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIG 283 +PLH WLP + P+ SAL + MV GIF + +++ +V+ IG Sbjct: 250 VPLHVWLPESM-EGPTPISALIHAATMVTAGIFMVARMSPIFEQSATALS----VVLIIG 304 Query: 284 AISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALF 343 A++A L L + DIKR++A+ST+ +G + A+G + A+F Sbjct: 305 AVTAFFMGLVGLVQNDIKRIIAYSTISQLGYMTAALGAS--------------AFSAAIF 350 Query: 344 HLLNHALFKGLLFLGAGAIISRL-HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLN 402 HL+ HA FK LLFL AG++I + + D+ KMG L K MP T LIG L++S IPP Sbjct: 351 HLMTHAFFKALLFLAAGSVIHAMSNEQDIRKMGGLRKVMPITYITFLIGSLSLSGIPPFA 410 Query: 403 GFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRST 462 GF S+ +++ ++ A ML + + +M+ + F GAPR Sbjct: 411 GFFSKDLIIEAV-------GLSTLPGAGWAEWMLVAGAFVTALYTFRMFFLVFHGAPRMD 463 Query: 463 HA--EEAQEVPNTMIVAMLLLAALCVLIALS--ASWLAPKIMHIAHAFTNTPPATVASGI 518 E P + V ++ LA V + + + Sbjct: 464 AHTRAHLHESPWVITVPLIALAIPAVYAGWAYIGPVGLGHFLDSSLVVAPQWNTIGEIRA 523 Query: 519 ALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAP 578 + + L + + ++ W R Sbjct: 524 HWQGAGAFVLHSVETVPFWLALLGIAVAAWFYWLRPGLPEALTR---------------- 567 Query: 579 SGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQ 638 + P+ + L E D ++ Sbjct: 568 ----FLSPIVWALQRKYGFDAFNQTVLVRGVLQLGALFWHVGDERLIDGIMVNGTAREIG 623 Query: 639 RLAKEIQHLQSGDFRLYCLYVVAALVVLLIAIAV 672 + A + +Q+G Y ++ L++L+ V Sbjct: 624 KAALSWRRVQTGYIYHYAFAMIIGLILLMSYFVV 657 >UniRef50_Q21AT7 NADH dehydrogenase (Quinone) n=16 Tax=Alphaproteobacteria RepID=Q21AT7_RHOPB Length = 687 Score = 400 bits (1028), Expect = e-110, Method: Composition-based stats. Identities = 208/651 (31%), Positives = 327/651 (50%), Gaps = 8/651 (1%) Query: 8 TWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAPP 67 + L ++ +L L + G T+LV I + Sbjct: 25 LVCVAALLAIAVLALPLSRTRAATAVVYGATTLVCAGALIGALRWLFAGAAADELVLPIG 84 Query: 68 FEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVA 127 + R+D+L+AF + V++L V SLY+L Y + + F F+A M Sbjct: 85 LPWLGAHFRLDALAAFFLGVVNLGGAVASLYALGYGQHET--APQRVLPFFPAFLAGMNL 142 Query: 128 LLVMDNAFWFIVLFEMMSLSSWFLVI-ARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMG 186 +++ +AF +++ +E MSL+SW LV+ ++ + AG +Y +A G++ +++AF L+ Sbjct: 143 VVLAADAFSYLLCWEFMSLASWALVMTHHREPGNARAGYVYLLMASFGTLALLLAFGLLA 202 Query: 187 RESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALM 246 +G FA+ R + +P A+ V +L G G+KAG++PLH WLP AHPAAPSH SALM Sbjct: 203 GPAGDYGFAAIRAMPHAPAEATLVLILMLLGAGSKAGLVPLHVWLPLAHPAAPSHVSALM 262 Query: 247 SGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAW 306 SGVM K+ ++G ++V DLL +LV+++G ++A++G+LYAL E+D+KRLLA+ Sbjct: 263 SGVMTKVAVYGFIRVVFDLLGPPNWTA--SVLVLSLGGVTAVMGILYALLEKDLKRLLAY 320 Query: 307 STVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRL 366 ST+EN+GII + +G+A+ + L + ALFH+ NH+LFK LLF GAGA++ Sbjct: 321 STIENIGIIFVCLGLALAFQANGQTLAASLAFTAALFHVFNHSLFKSLLFFGAGAVLVAT 380 Query: 367 HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQ 426 DM+++G L RMP T+ LIGC+AISA+PP NGF+SEW +Q++ + L+ Sbjct: 381 GARDMDRLGGLIHRMPVTSVVFLIGCVAISALPPFNGFVSEWLMFQAVLLSPSLPQWGLK 440 Query: 427 LAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCV 486 + P +LA+ LA CFVK YG++F PRS A AQEV + AM++LA+LC+ Sbjct: 441 IMVPAIGALLALAAALAAACFVKAYGVSFLSRPRSDAAANAQEVDRFSLAAMVILASLCL 500 Query: 487 LIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPG 546 L + + + + ++ A + L + LL+L + + Sbjct: 501 LAGIFPGLVIDALSPVTQQILDSRLAVQSHLPWLSIIPIAERRGSYNGLLVLAFIAISAS 560 Query: 547 LYWLWCRSRRAAFRRTGDAWACGY-GWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTL 605 L +L R + R AW CG+ S + QPLR VF L ++ Sbjct: 561 LGYLAIRRFSSHAVRRAPAWGCGFSDAVPQAQYSPDSFAQPLRRVFGTLLFAAREHVE-- 618 Query: 606 RLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYC 656 G + E + I A A + Q R Y Sbjct: 619 MPPPGAVTPARFSVEIHDLVWEGLYGRIAGAVDYAAIRLDRWQLLTIRGYL 669 >UniRef50_A9QPJ4 Formate hydrogenlyase subunit 3 n=1 Tax=Methylacidiphilum infernorum V4 RepID=A9QPJ4_METI4 Length = 667 Score = 400 bits (1028), Expect = e-110, Method: Composition-based stats. Identities = 218/655 (33%), Positives = 330/655 (50%), Gaps = 10/655 (1%) Query: 3 ALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVA 62 L L+L L + L + + L ++ G+ ++S L G + A Sbjct: 1 MQDYLLKGLLLSFVFYLGLILLARKNYRGVYL--LSGFYAGISFLLSLFFLLFHGSSQAA 58 Query: 63 RFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFI 122 F R+DSLSAF +LV++L + SLY L Y + + + F +F+ Sbjct: 59 VFPLGLPGTGAHFRIDSLSAFFLLVVNLASFMASLYGLGYGSHFAEQQ--RILPFYILFL 116 Query: 123 ASMVALLVMDNAFWFIVLFEMMSLSSWFLV-IARQDKTSINAGMLYFFIAHAGSVLIMIA 181 SM +L+ + F F+ +E+MSLSSW LV + ++K + AG +Y +A G+ ++ + Sbjct: 117 GSMNMVLLAADMFSFLFFWELMSLSSWALVMSSHKEKETAGAGFIYLLMAVLGTFALLFS 176 Query: 182 FLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSH 241 L+ SG+ F +L AS VF LA FG G+KAG++PLH+WLPRAHPAAPSH Sbjct: 177 MSLLASHSGTFSFEGMSKAALPSKSASLVFALALFGAGSKAGLVPLHAWLPRAHPAAPSH 236 Query: 242 ASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIK 301 SALMSGVM K+ ++G L++ DLL WW L++ I +S + GVLYAL + D+K Sbjct: 237 VSALMSGVMTKVAVYGFLRIVFDLLRTQE--KWWSYLLLVIAGVSMIAGVLYALMQHDLK 294 Query: 302 RLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGA 361 RLLA+ T+EN+GI+ + +G+AM + + + +LFH+LNH+LFK LLFLGAG+ Sbjct: 295 RLLAYHTIENIGIVFVGIGLAMAFKTYGMVAASALSFSASLFHVLNHSLFKNLLFLGAGS 354 Query: 362 IISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVE 421 I S + DMEK+G L +MP+TA A L+G +AI A+PPLNGF+SEW QS+ ++ Sbjct: 355 IQSSTGSRDMEKLGGLVSKMPYTAFAFLMGSMAICALPPLNGFVSEWLLMQSILLSPQLP 414 Query: 422 AVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLL 481 + L+ P LA++ LA CF+K+YGITF G PRS A A E ++A+ L Sbjct: 415 SWGLKFLVPSIGAFLALSAALAASCFIKVYGITFLGRPRSMSAMAATETDRWSLLALYFL 474 Query: 482 AALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAM 541 A LC+L + + + + + ++ P + + L L+L + Sbjct: 475 AFLCLLWGVFPAPVLHLLGPAVGLLSGGEYFNLSGKPFYEPLSLNIDRNAYNGLFLILLL 534 Query: 542 PLLPGLYWLWCRSRRAAFRRTGDAWACGYGW-ENAMAPSGNGVMQPLRVVFSALFRLRQQ 600 + + + R AW CGY + QP+R VF F + Sbjct: 535 GGFSLCILFMVLGKASPYARKTPAWDCGYPENSPFCQYTAGSYAQPIRKVFGPAFFAVK- 593 Query: 601 LDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLY 655 + + L+ L E P+ R + +I LQ R Y Sbjct: 594 -EKVVCLSPWLPKPARIFLRLHDLAWEYGYLPVARTIDRWSAKINILQFLTVRRY 647 >UniRef50_B3QXL9 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QXL9_CHLT3 Length = 643 Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats. Identities = 149/690 (21%), Positives = 272/690 (39%), Gaps = 81/690 (11%) Query: 7 LTWSLILYLFASLASLFLL------GLDRLAIKLSGITSLVGGVIGIISGITQLHAG--- 57 + LI +L L G + L S LV I + + + Sbjct: 9 VLLPLIGFLINGALYLAGFSKKQEIGREMLVGGFSATVILVPFFILLKTFLDYPSDHDAQ 68 Query: 58 ---VTLVARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAM 114 + +T R+DSLS M LV++ + + +YS+ YM + K A Sbjct: 69 PLLFPIYQWIEAGGLDISITYRIDSLSLLMGLVVTGVGSLIHIYSIGYM--HGDKDFARF 126 Query: 115 GFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKT--------SINAGML 166 ++N+FI +M+ L++ ++ + +E + L S+ L+ DK + NA Sbjct: 127 FSYLNLFIFAMMNLILAESMPLMFLGWEGVGLCSYLLIGFWYDKKFDGVGITWTGNAANK 186 Query: 167 YFFIAHAGSVLIMIAFLLMGRESGSLDFASF--RTLSLSPGLASAVFLLAFFGFGAKAGM 224 F + G ++IA L+ + G LDF SL GLA + LL F G K+ Sbjct: 187 AFIVNRIGDFAMLIAMFLIFQNIGRLDFTGILSGAASLDAGLAFWITLLIFIGSTGKSAQ 246 Query: 225 MPLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIG 283 +PL WLP A A P+ SAL + MV GI+ I +++ L L ++ +G Sbjct: 247 IPLFVWLPDAM-AGPTPVSALIHAATMVTSGIYLIARLSPLFL----LAPETMHIIAVVG 301 Query: 284 AISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALF 343 ++A++ + + DIK++LA+STV +G + LA+G+ A+F Sbjct: 302 TLTAIMAGTIGIVQNDIKKVLAYSTVSQLGYMFLALGIG--------------AFSTAIF 347 Query: 344 HLLNHALFKGLLFLGAGAIISRLH-THDMEKMGALAKRMPWTAAACLIGCLAISAIPPLN 402 H+ HA FK LFLG+G++I +H D+ KMG L K+MP TA LI A++ P Sbjct: 348 HVATHAFFKACLFLGSGSVIHGMHEEQDIRKMGGLFKKMPSTAITFLIATFALAGFPLTA 407 Query: 403 GFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRST 462 GF S+ + F + + +T + +++Y +TF G PR + Sbjct: 408 GFFSKDAILAAAFGSHNT----------LLYGVGVLTAVITAFYSMRLYTLTFLGNPRWS 457 Query: 463 HAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVP 522 E P M + + +LAAL ++ P ++ + + V G + Sbjct: 458 EHAHPHESPAVMTLPLWVLAALSLVGGFIG---LPPVVQETNWIDGWLHSAVEIGHFHLS 514 Query: 523 GTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNG 582 + L ++ + + + Y + +A Sbjct: 515 HETEWLLIALSGGLSIVGLLIGYFI----------------------YSKKLELAEKAKS 552 Query: 583 VMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAK 642 + + F + + + + + + + + + + +L++ Sbjct: 553 QLAFIYQTFLNKYYIDELYEKIVSTPVQFLADKIF-YPFDKYGIDGTVNGTGTFFLKLSE 611 Query: 643 EIQHLQSGDFRLYCLYVVAALVVLLIAIAV 672 + LQ G + Y L + +V++ + + Sbjct: 612 LFRKLQDGATQSYALTITIGIVIITTLLVL 641 >UniRef50_A0AL63 Complete genome n=20 Tax=Bacillales RepID=A0AL63_LISW6 Length = 802 Score = 398 bits (1022), Expect = e-109, Method: Composition-based stats. Identities = 136/594 (22%), Positives = 256/594 (43%), Gaps = 17/594 (2%) Query: 1 MDALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTL 60 M L L ++ A L LF ++ + V I ++ I + T+ Sbjct: 1 MSFLHLAILLP--FIVALLIPLFYRWTKQVHTGWLVLPIPVILFIYFLTFIPKTMHEATI 58 Query: 61 VARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNI 120 V+ P + T+ +D LS L+I+ + + + YS+ Y+ + + + F+ + Sbjct: 59 VSMPWIPRLGINFTVVVDGLSLLFALLITGIGSLVTFYSIYYL-GKKKERLSNFYTFLFM 117 Query: 121 FIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKT-SINAGMLYFFIAHAGSVLIM 179 F+ +M+ +++ DN + +E+ S+SS+ L+ + S I G ++++ Sbjct: 118 FMTAMLGVVLSDNLIVLYLFWELTSISSFLLIGYWYHRERSRYGARKSMMITVFGGLMML 177 Query: 180 IAFLLMGRESGSLDFASF---RTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHP 236 F+L+ S S + + L +L G K+ +P H WLP A Sbjct: 178 GGFILLHIMSDSFSIRAIIQNADIISHNSLFIPAMILVLLGAFTKSAQVPFHIWLPDAM- 236 Query: 237 AAPSHASA-LMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYAL 295 AP+ SA L S MVK GI+ + + + W V +G + G L A Sbjct: 237 EAPTPVSAYLHSATMVKAGIYIVARFTPLFASSG----VWFWTVSLVGITTLFWGSLNAT 292 Query: 296 AEQDIKRLLAWSTVENVGIIL--LAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKG 353 + D+K +LA+ST+ +G+I+ L VG A + + V+ ++ A+FHL NHA FKG Sbjct: 293 KKNDLKAILAYSTISQLGMIMALLGVGAASLHFDTLSDDIYVMAIVAAVFHLFNHATFKG 352 Query: 354 LLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQS 413 LF+ G + T D+ ++G L + MP TA IG A++ IPP NGF+S+ ++S Sbjct: 353 SLFMMVGIVDHETGTRDIRRLGGLMRIMPITATIAFIGTFAMAGIPPFNGFLSKEMFFES 412 Query: 414 LFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRS-THAEEAQEVPN 472 + +++ ++ G + V+ V + + ++ TF G + ++ E P Sbjct: 413 MINITHLQLFDASTWGILLPVVAWVASVFTFVYSMIIFFKTFTGKVKPFLLPKKPHEAPF 472 Query: 473 TMIVAMLLLAALCVLIALSASWLA-PKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTP 531 +++ ++L+ VLI L + +A P + A + I+L G + Sbjct: 473 GLLLPPIILSIFVVLIGLFPNLIAKPILEPAVRAIVPGLATDFSIHISLWHGFTPALLMT 532 Query: 532 SLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQ 585 ++ + + + L + W +R R G + G + + + Sbjct: 533 FGVVAVGILLFLTHKYWKPWITTRVPKALRIGKTYDNGMYYLEQGSYRMTMFIM 586 >UniRef50_A6LXP7 Proton-translocating NADH-quinone oxidoreductase, chain L n=8 Tax=cellular organisms RepID=A6LXP7_CLOB8 Length = 617 Score = 397 bits (1020), Expect = e-109, Method: Composition-based stats. Identities = 130/680 (19%), Positives = 264/680 (38%), Gaps = 90/680 (13%) Query: 7 LTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVT------- 59 L W + ++ + + + + + +S ++ G V+ I + + +T Sbjct: 6 LAWMIPVFPAIAFLIIGFI--TKKSKVISSAIAIGGMVLSFIFSLGVFYEVITSKVSINK 63 Query: 60 ---LVARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGF 116 + ++ + +D L+A M+++++ + ++ +YSL YM+ KG + Sbjct: 64 PVEYAVSWLSAPIKIEVGVLIDPLTATMLIIVTFIGLLVEIYSLGYMKGE--KGFSRFFA 121 Query: 117 FMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKT-SINAGMLYFFIAHAGS 175 +++F +SM+ L++ +N F +E++ L S+ L+ D+ ++ A F G Sbjct: 122 NLSLFTSSMLGLVISNNYFQMFFFWELVGLCSYLLIGFYYDRPSAVKANKKAFVANRVGD 181 Query: 176 VLIMIAFLLMGRESGSLDFASFRTLSL---SPGLASAVFLLAFFGFGAKAGMMPLHSWLP 232 ++ L + G+ +F + + LL F G AK+ PLH WLP Sbjct: 182 FGFLVGMLCLFMAFGTFNFRELAASIPAYQDVVYLTIIALLIFAGPVAKSAQFPLHVWLP 241 Query: 233 RAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGV 291 A P+ SAL + MV G++ + + + +++ IG I+A + Sbjct: 242 DAM-EGPTPVSALIHAATMVAAGVYLLARGYILF----SSLHEVSLVIAYIGGITAFMAG 296 Query: 292 LYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALF 351 A+ ++D+KR+LA+ST+ +G +++A+GV G +FHL +HA F Sbjct: 297 TIAIVQRDLKRILAFSTMSQLGYMVMAMGVG--------------GFTSGMFHLTSHAFF 342 Query: 352 KGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTW 411 K LLFLGAG+II + D+ KMG L K+M + +I L+++ IPPL+GF S+ Sbjct: 343 KALLFLGAGSIIHSIGVQDIFKMGGLIKKMKLVSITFIIASLSLAGIPPLSGFFSKDEIL 402 Query: 412 QSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVP 471 + + + +T L ++ I F G R H+ + P Sbjct: 403 TVTYEHGYI----------FLYYLGLITAFLTAFYMARLVLIVFFGEEREKHS--VHKTP 450 Query: 472 NTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTP 531 M V +++L+ V A I Sbjct: 451 WCMTVPLIILSVFSVFYGFINETFASYIYFQTSQIPEAN--------------------- 489 Query: 532 SLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVF 591 L+++ G+ W + + + + Sbjct: 490 -LMVMSESVAAAFSGILLGWLIYGKKIISSEA----------------LSVKFRAIHQFL 532 Query: 592 SALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGD 651 + + + K + +++ + + + S R+ +++ + SG Sbjct: 533 FNQYYINELYQWIYE--KVVLNISYLFNWCDRNVVDGIFDNTTSFISRIGDKLRLIHSGR 590 Query: 652 FRLYCLYVVAALVVLLIAIA 671 + Y L + +++I +A Sbjct: 591 VQNYALIFFITIALIIIWLA 610 >UniRef50_B3Q7M3 Proton-translocating NADH-quinone oxidoreductase, chain L n=3 Tax=Rhodopseudomonas palustris RepID=B3Q7M3_RHOPT Length = 697 Score = 396 bits (1019), Expect = e-108, Method: Composition-based stats. Identities = 137/665 (20%), Positives = 239/665 (35%), Gaps = 73/665 (10%) Query: 28 DRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAPPF----EFADLTLRMDSLSAF 83 RLA ++ L+ + ++ + P LR+D+L+A Sbjct: 81 SRLAEIVTTTLLLISCALSWVTLVEVGFMHHDSRVALLPWINSGELQVAWALRVDTLTAV 140 Query: 84 MVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEM 143 M++V++ + + LYS+ YM E + ++++F +M+ L+ DN +E Sbjct: 141 MLVVVTTVSSLVHLYSIGYMHEDPHR--PRFFGYLSLFTFAMLMLVTADNLLQLFFGWEG 198 Query: 144 MSLSSWFLVIARQDKTSI-NAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRTLSL 202 + L+S+ L+ K S A + F + G ++ + GS DF + + + Sbjct: 199 VGLASYLLIGFWYQKPSANAAAIKAFVVNRVGDFGFLLGIFTIFVLVGSTDFDTIFSAAP 258 Query: 203 S------------PGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASAL-MSGV 249 S + L+ F G K+ LH+WLP A P+ SAL + Sbjct: 259 SLTGKTINFFGWHADALTLACLMLFMGAMGKSAQFLLHTWLPDAM-EGPTPVSALIHAAT 317 Query: 250 MVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTV 309 MV G+F + +++ L +VM GA +A L + DIKR++A+ST Sbjct: 318 MVTAGVFMVARMSPLF----ELAPNAQAVVMFFGATTAFFAATIGLVQNDIKRIVAYSTC 373 Query: 310 ENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRL-HT 368 +G + +A+G +FHL HA FK LLFLGAG++I + H Sbjct: 374 SQLGYMFVAMGAG--------------AYSVGMFHLFTHAFFKALLFLGAGSVIHAMHHE 419 Query: 369 HDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLA 428 D+ MG L R+P+T LIG LA++ P G+ S+ ++ F A Sbjct: 420 QDIRNMGGLKDRIPFTYGVMLIGTLALTGFPLTAGYFSKDAIIEAAFVSKNPLAFY---- 475 Query: 429 GPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRS-THAEEAQEVPNTMIVAMLLLAALCVL 487 +M V L ++ TF G P H E A E P M + + +LA + Sbjct: 476 ---GFLMTVVAALLTSFYSWRLVFKTFHGEPHDRKHYEAAHESPLVMTIPLFVLAFGALA 532 Query: 488 IALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGL 547 L A +S P+ + LL M ++ L Sbjct: 533 AGYPFKELF--------AGHGIEEFFRSSLKMHPHIIEEMHHIPAWIALLPTVMMVVGFL 584 Query: 548 YWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRL 607 + RR + + L + + + Sbjct: 585 VSWFFYIRR-----------------PDIPVELASQHRLLYQFLLNKWYFDELYEIIFVR 627 Query: 608 NKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLL 667 + D I + + + + +Q+G Y ++ + L+ Sbjct: 628 PAKWIGRQLWKKGDGLLIDGFGPDGISARVLDVTRGVVRMQTGYLYHYAFAMLIGVAGLI 687 Query: 668 IAIAV 672 + Sbjct: 688 TWFIL 692 >UniRef50_P31971 NAD(P)H-quinone oxidoreductase chain 5 n=25 Tax=cellular organisms RepID=NU5C_SYNP2 Length = 664 Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats. Identities = 154/723 (21%), Positives = 262/723 (36%), Gaps = 111/723 (15%) Query: 1 MDALQLLTWSLILYLFASLASLFLL-----------GLDRLAIKLSGITSLVGGVIGIIS 49 M+ L W + + + + LS I + + G++ Sbjct: 1 MEPLYQYAWLIPVLPLLGAMVIGIGLISLNKFTNKLRQLNAVFVLSLIGTSMALSFGLLW 60 Query: 50 GITQLHAGVTLVARFAPPFEF-ADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEG 108 Q H T +A +F + +D LSA M ++++ + ++ +Y+ YM G Sbjct: 61 SQIQGHEAFTYTLEWAAAGDFHLQMGYTVDHLSALMSVIVTTVALLVMIYTDGYMAHDPG 120 Query: 109 KGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSIN-AGMLY 167 +++IF +SM+ L+ N + +E++ + S+ L+ D+ + A Sbjct: 121 --YVRFYAYLSIFSSSMLGLVFSPNLVQVYIFWELVGMCSYLLIGFWYDRKAAADACQKA 178 Query: 168 FFIAHAGSVLIMIAFLLMGRESGSLDFASFRTLS--------LSPGLASAVFLLAFFGFG 219 F G +++ L + +GS +F +S LA +L F G Sbjct: 179 FVTNRVGDFGLLLGMLGLYWATGSFEFDLMGDRLMDLVSTGQISSLLAIVFAVLVFLGPV 238 Query: 220 AKAGMMPLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGIL 278 AK+ PLH WLP A P+ SAL + MV G+F + ++ + Sbjct: 239 AKSAQFPLHVWLPDAM-EGPTPISALIHAATMVAAGVFLVARMYPVFEPIPEAMN----V 293 Query: 279 VMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGL 338 + GA +A LG AL + DIK+ LA+ST+ +G +++A+G+ G Sbjct: 294 IAWTGATTAFLGATIALTQNDIKKGLAYSTMSQLGYMVMAMGIG--------------GY 339 Query: 339 LGALFHLLNHALFKGLLFLGAGAIISRLHT---------HDMEKMGALAKRMPWTAAACL 389 LFHL+ HA FK +LFLG+G++I + DM MG L K MP TA L Sbjct: 340 TAGLFHLMTHAYFKAMLFLGSGSVIHGMEEVVGHNAVLAQDMRLMGGLRKYMPITATTFL 399 Query: 390 IGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVK 449 IG LAI IPP GF S+ F + P+ + T G+ + Sbjct: 400 IGTLAICGIPPFAGFWSKDEILGLAFEAN-----------PVLWFIGWATAGMTAFYMFR 448 Query: 450 MYGITFCGAPR--------------------STHAEEAQEVPNTMIVAMLLLAALCVLIA 489 MY +TF G R H + E P TM ++ LA VLI Sbjct: 449 MYFLTFEGEFRGTDQQLQEKLLTAAGQAPEEGHHGSKPHESPLTMTFPLMALAVPSVLIG 508 Query: 490 LSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYW 549 L + P A + + + L + L + Sbjct: 509 LLGVPWGNRFEAFV-----FSPNEAAEAAEHGFELTEFLIMGGNSVGIALIGITIASLMY 563 Query: 550 LWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNK 609 L R A L + + + + Sbjct: 564 LQQRIDPARLAEKFPV---------------------LYQLSLNKWYFDDIYNNVFVM-- 600 Query: 610 GLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLIA 669 G + + + + + AT + ++++++G + Y L V A++ +I Sbjct: 601 GTRRLARQILEVDYRVVDGAVNLTGIATLLSGEGLKYIENGRVQFYALIVFGAVLGFVIF 660 Query: 670 IAV 672 +V Sbjct: 661 FSV 663 >UniRef50_B6WWH3 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WWH3_9DELT Length = 670 Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats. Identities = 210/674 (31%), Positives = 329/674 (48%), Gaps = 18/674 (2%) Query: 4 LQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAG---VTL 60 L LL ++ A L L +L+ + +G G G+ L +L Sbjct: 3 LILLALCVLAVSAAGLGLLAFARPTPATTRLADLFGPLGAACGCALGMAGLFTDSWTGSL 62 Query: 61 VARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREY--EGKGAAAMGFFM 118 + A L+L +D+LS +L + L VC+ +R AA F Sbjct: 63 LWTQAWGLPVGSLSLGLDALSRVFLLPVFGLGFVCACAGGISLRHTRASEHNLAAHWLFY 122 Query: 119 NIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSIN-AGMLYFFIAHAGSVL 177 + + M +++ +A F++ +E+MSLS +FL+ ++ A +Y AH G+VL Sbjct: 123 LLLVLGMAVVMMARDAVLFLLAWEVMSLSPFFLIDFNDSDRNVRDASWVYLVAAHLGAVL 182 Query: 178 IMIAFLLMGRESGSLDFASFRTLSLSP-GLASAVFLLAFFGFGAKAGMMPLHSWLPRAHP 236 ++ F L+ + +G FA LAS +F+L+ GFGAKAG+ P+H WLP AHP Sbjct: 183 LLAFFGLLWQNAGDTAFAVLALKEGPVVPLASVLFVLSLLGFGAKAGIAPMHVWLPEAHP 242 Query: 237 AAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALA 296 AAPSH SAL+SG M+ G++GI++ + + P WWG L + +G +AL+G+L ALA Sbjct: 243 AAPSHISALLSGAMINAGLYGIIRSCEFVAPLSAAPAWWGWLTLFLGLGTALMGILKALA 302 Query: 297 EQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLF 356 + ++KRLLA+S+VEN+G++L+ VG ++G + + +GL GA+FH+LNH+ FKGLLF Sbjct: 303 QSNLKRLLAYSSVENMGLMLMGVGAWLIGSHSGNSWIGTLGLAGAMFHMLNHSAFKGLLF 362 Query: 357 LGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFS 416 L AG ++ T ME +G L +RMP AA IG ++I+ PP NGF E+ SL Sbjct: 363 LTAGEVLHATGTVRMELLGGLQQRMPLVGAAFGIGAVSIACFPPFNGFAGEFVLALSLLD 422 Query: 417 LSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIV 476 S + V QL +A+V+L + GLA + K YGITF GAPRS EEA + Sbjct: 423 GSSLPGVEQQLGLLMALVVLGLVSGLAAATYAKAYGITFLGAPRSRCVEEAHRPRPRDLW 482 Query: 477 AMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLL 536 + + A LCV L++ ++ +A P A + + + L Sbjct: 483 PLAIPAFLCVAGGLASGHCFRWLISTVNAPLPDPVAGQQVMLRVADMLG-------TVSL 535 Query: 537 LLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGW-ENAMAPSGNGVMQPLRVVFSALF 595 + + + L WL ++ A R + W CGY + + + +PL +F Sbjct: 536 VGMVLLALVAALWLLRKACIAGRLRREETWGCGYQYGTPRVQYTDASFSEPLGRIFGGAM 595 Query: 596 RLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLY 655 L+ + + + A S + P+ ++L + LQ G LY Sbjct: 596 GLKVHQE---LDGRYFPGKASVAISAPDRLRTGLFTPLFEGVEKLCNMCKILQHGKIHLY 652 Query: 656 CLYVVAALVVLLIA 669 LY++A LV LL Sbjct: 653 ILYILATLVALLAW 666 >UniRef50_B2HHH3 Oxidoreductase n=6 Tax=Mycobacterium RepID=B2HHH3_MYCMM Length = 658 Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats. Identities = 191/645 (29%), Positives = 303/645 (46%), Gaps = 10/645 (1%) Query: 30 LAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAPPFEFADLTLRMDSLSAFMVLVIS 89 LSG T+ G G G+T + GV A + + L F + + Sbjct: 21 FGAVLSGATTAGIGACGTALGLTAVF-GVVRQVHIAWLVPLIGVDFDIGRLGGFFIALTG 79 Query: 90 LLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSW 149 + VV +YS+ Y R A + +F+ +M+ + + F++ +E+M++SS Sbjct: 80 AVAVVAGIYSIGYARREHLGAVA--LTMLPVFVTAMLLVPAAGSVSTFLLAWELMAISSL 137 Query: 150 FLVIARQDKTSIN-AGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRTLSLSPGLAS 208 LV + + A Y + G +++ +++ +G+ FA S G+ + Sbjct: 138 VLVATDHRRAQVRSAAGYYAVMTQLGFATLLLGLMVLAAAAGTDRFADMA--VPSEGVRT 195 Query: 209 AVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQ 268 VF+ GFG+KAG++PLH+WLPRAHP +PS SALMS MV +GI+G++++ + LL Sbjct: 196 FVFVATLLGFGSKAGLLPLHAWLPRAHPESPSPVSALMSAAMVNLGIYGLVRIDLQLLGP 255 Query: 269 TGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSL 328 P WWG+ ++ IGA SA+ GVL A D+KRLL +ST+EN+G++ L +G A + + Sbjct: 256 G--PKWWGVTLLVIGAFSAMYGVLQASVATDLKRLLGYSTIENMGLVTLGLGAATLLSAA 313 Query: 329 HDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAAC 388 V+ + AL HL+ HA FK L FL AG+++ D++ +G LA RM T Sbjct: 314 GAGPAAVIAMTAALLHLIAHAAFKSLGFLAAGSVLVATQQRDLDMLGGLAHRMRCTTTFF 373 Query: 389 LIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFV 448 I L S +P GF+SEW QSL + LA P+ + +A+T GL V V Sbjct: 374 GIAALGASGLPLGAGFVSEWLLVQSLIHARPEHNTIVGLATPLGVGAVALTTGLGVAAMV 433 Query: 449 KMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTN 508 K +G F PRS AE A+E P TM+V M + A CV+IA++ + + + + Sbjct: 434 KAFGTGFLARPRSGSAERAREAPATMLVGMAVAALGCVVIAIAPAVVTGPLQSVLDTLPA 493 Query: 509 TPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWAC 568 + A + ++ LL L LL L SR T WAC Sbjct: 494 SRNADLTDLGTVLRLPGMDGSISPALLAAALVAALLVVLVLARWGSRHRPEPVTSPLWAC 553 Query: 569 GYG-WENAMAPSGNGVMQPLRVVFSALFRLRQQLDPT-LRLNKGLAHVTARAQSTEPFWD 626 G M + QPL+ VF + R ++ T L + A + Sbjct: 554 GADELTARMECTPTSFAQPLQRVFDDVLRPDTGIEVTHLEATRYHVEQIAYRAHLSDAIE 613 Query: 627 ERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLIAIA 671 +R+ P++ A A+ I+ +G LY Y ++++L+ Sbjct: 614 DRIYAPVLRALAWCAQVIRRAHNGSVHLYLGYGALGVLIVLVVAR 658 >UniRef50_D2QSX4 Proton-translocating NADH-quinone oxidoreductase, chain L n=2 Tax=Bacteroidetes RepID=D2QSX4_9SPHI Length = 642 Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats. Identities = 139/690 (20%), Positives = 254/690 (36%), Gaps = 75/690 (10%) Query: 1 MDALQLLTWSLILYLFASLA-SLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGV- 58 M L + L L L + + +++ + Sbjct: 1 MKIELLCALIPLFPLIGFLINGLGFRRVPKGLAGAISTVAVLASFLTSAYLFGAFLGNAN 60 Query: 59 ----------TLVARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEG 108 TL + + + ++D LS M+LV++ + + LYS+ YM EG Sbjct: 61 LSANAGPQIATLFDWISVGDLHINFSFQIDQLSLLMLLVVTGVGSLIHLYSIGYMSHDEG 120 Query: 109 KGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSIN-AGMLY 167 F+N+FI M+ L++ N + +E + L S+ L+ S N A Sbjct: 121 --FGKFMAFLNLFIFFMLLLVMGSNYVIMFIGWEGVGLCSYLLIGFWNKNISYNNAARKA 178 Query: 168 FFIAHAGSVLIMIAFLLMGRESGSLDFASFRTLSLSPGL----ASAVFLLAFFGFGAKAG 223 F + G + ++ ++ G++++ + S + A+ LL F G K+ Sbjct: 179 FVMNRIGDLGFLLGIFMLINTFGTVEYVDIFKQATSLAVGDKTILAITLLLFVGAMGKSA 238 Query: 224 MMPLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAI 282 +PL++WLP A A P+ SAL + MV GI+ +++ + L ++ I Sbjct: 239 QVPLYTWLPDAM-AGPTPVSALIHAATMVTAGIYMVVRSNVLY----TLAPLTLEIIGGI 293 Query: 283 GAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGAL 342 ++ALL L + DIK++LA+STV +G + L + + + Sbjct: 294 AIVTALLAASIGLLQNDIKKVLAYSTVSQLGYMFLGL--------------SATAYTAGM 339 Query: 343 FHLLNHALFKGLLFLGAGAIISRL-HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPL 401 FH++ HA FK LLFLGAG++I + D+ KMG L K +P T LIG +AIS +PP Sbjct: 340 FHVITHAFFKALLFLGAGSVIHAMSDEQDIRKMGGLRKALPVTFITFLIGTIAISGLPPF 399 Query: 402 NGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPR- 460 GF S+ +F ++ + + + GL ++ +TF G R Sbjct: 400 AGFFSKDEILAHVFEHNK-----------LLWGLGVLGSGLTSFYMFRLLFLTFFGEFRG 448 Query: 461 -STHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIA 519 E P TM +++LA L ++ + A Sbjct: 449 TEEQRHHLHESPATMTAPLVVLAILSIIGGGLNLPGGGWLSGFMAPIFEGSKQVSPEAFA 508 Query: 520 LVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPS 579 T+ + + + L+ R A + Sbjct: 509 ESTIEHSTEYILMAVSAGVALLALIIAYVMYISRQAVPAPESAERSLP------------ 556 Query: 580 GNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQR 639 V + + + + + + + V+ + Q+ Sbjct: 557 --------EQVIYNKYYVDELYETIIVRPIRGLGDAFYS--FGEGLVDGVVNGVAWVVQK 606 Query: 640 LAKEIQHLQSGDFRLYCLYVVAALVVLLIA 669 ++ +++ LQSG Y L +V ++VV+ Sbjct: 607 ISAQLRLLQSGSIGFYVLAMVVSIVVIFAL 636 >UniRef50_B2IHV5 Proton-translocating NADH-quinone oxidoreductase, chain L n=8 Tax=cellular organisms RepID=B2IHV5_BEII9 Length = 666 Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats. Identities = 148/710 (20%), Positives = 253/710 (35%), Gaps = 98/710 (13%) Query: 10 SLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVA------- 62 +++ A + G A +T+ + V ++S IT + G+ + Sbjct: 4 AIVFLPLAGFLIAGIFGRVIGARASEIVTTSLLFVAALLSWITFVQVGLGVAPARTELLA 63 Query: 63 -RFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIF 121 F D LR+D+L+A M++V++ + + LYS+ YM E + +++ F Sbjct: 64 PWFDSGALQVDWALRIDTLTAVMLVVVTTVSALVHLYSIGYMHEDPSRS--RFFAYLSFF 121 Query: 122 IASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSI-NAGMLYFFIAHAGSVLIMI 180 +M+ L+ DN +E + L+S+ L+ +K S A + F G ++ Sbjct: 122 TFTMLTLVTADNLVQMFFGWEGVGLASYLLIGFWYEKPSACAAAIKAFVANRVGDFGFLL 181 Query: 181 AFLLMGRESGSLDFASFRTLSLSPG------------LASAVFLLAFFGFGAKAGMMPLH 228 L+ + S+ F + S + LL F G K+ LH Sbjct: 182 GIFLVFLLTHSVSFDQVFAAAPSLAGKSLHVFGHDFDAMTITCLLLFMGAMGKSAQFLLH 241 Query: 229 SWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISA 287 +WLP A P+ SAL + MV G+F + +++ + V IGA +A Sbjct: 242 TWLPDAM-EGPTPVSALIHAATMVTAGVFMVARLSPLFEQAPVALSF----VTIIGATTA 296 Query: 288 LLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLN 347 L + DIKR++A+ST +G + +A+GV G +FHL Sbjct: 297 FFAATVGLVQNDIKRVIAYSTCSQLGYMFVALGVG--------------GYSLGIFHLFT 342 Query: 348 HALFKGLLFLGAGAIISRL-HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFIS 406 HA FK LLFLGAG++I + H DM KMGAL R+P+T +G LA++ P G+ S Sbjct: 343 HAFFKALLFLGAGSVIHAMHHEQDMRKMGALRDRIPFTFWMMTLGTLALTGFPLTAGYFS 402 Query: 407 EWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPR------ 460 + ++ F+ R A+ V V GL ++ +TF G Sbjct: 403 KDAIIEAAFASERTGALY-------GYVATVVAAGLTSFYSWRLVFMTFFGPAHWGADAH 455 Query: 461 ------------------STHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHI 502 HA E E P M + +L+L A V L + Sbjct: 456 AAHDDHGHAHASGHDDHGHAHALEPHEPPFVMRLPLLILGAGAVFAGL---LFDHSFIGE 512 Query: 503 AHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRT 562 + L ++A+ L LY R A Sbjct: 513 GQEGFWKEALFYGPNNHIFHQMEEIPRLAGLAPTFMMALGFLVSLYVYILRPGTAQRWAQ 572 Query: 563 GDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTE 622 + + + + D L + + Sbjct: 573 TNP--------------------LVYNFLLNKWYFDELYDLILIRPAFWLGRLFWKRGDQ 612 Query: 623 PFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLIAIAV 672 F D + + + + + LQ+G Y ++ + ++ V Sbjct: 613 GFIDRFGPDGVSAVVIDVTRRVVKLQTGYIYHYAFAMLIGVAAIVTFYVV 662 >UniRef50_C6HUH6 NADH dehydrogenase (Quinone), chain L n=2 Tax=Bacteria RepID=C6HUH6_9BACT Length = 643 Score = 394 bits (1014), Expect = e-108, Method: Composition-based stats. Identities = 143/695 (20%), Positives = 253/695 (36%), Gaps = 84/695 (12%) Query: 1 MDALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTL 60 M L + L+ +L + F G S + + + + Sbjct: 2 MPILLIPLLPLLGFLIVGIFWPFFKGKGHFVALPLVTISWAIATVEFFKSFSAPPSLTLV 61 Query: 61 VARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNI 120 ++L+ D L+A M+ +++ + ++ LY++ YM + G ++++ Sbjct: 62 YDWIRSGHLDVGISLQYDHLAAVMLFMVTTVAMLVHLYTVGYM--HGDSGYDRFFAYISL 119 Query: 121 FIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKT-SINAGMLYFFIAHAGSVLIM 179 F SM+ L++ DN + +E + L S+ L++ ++ S A F + G + Sbjct: 120 FTFSMIMLVLSDNLVEMFIFWEAVGLCSYLLIVHWYERRPSWLAANKAFIMNRVGDFGFL 179 Query: 180 IAFLLMGRESGSLDFASFRTLSLSP-----------------GLASAVFLLAFFGFGAKA 222 + L GS+ FA S + + LL F G K+ Sbjct: 180 LGIFLAYTVFGSVRFAEIFPAIGSHLHQSVNLAAVFHGSWNVPVLDVIALLLFLGAVGKS 239 Query: 223 GMMPLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMA 281 +PLH WLP A P+ SAL + MV G+F I ++ + +V Sbjct: 240 AQIPLHPWLPDAM-EGPTPISALIHAATMVTAGVFMIARMNPLY----NAAPFALHVVAW 294 Query: 282 IGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGA 341 GAI+A++ AL + DIK+++A+ST+ +G +++ G+ G Sbjct: 295 TGAITAIVAATIALTQPDIKKIVAYSTMSQLGYMVMICGLG--------------GYGAG 340 Query: 342 LFHLLNHALFKGLLFLGAGAIISRL-HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPP 400 +FHLL H FK LLFLGAG++I L D+ +MG L K + T A LIG LA+S IPP Sbjct: 341 IFHLLTHGAFKALLFLGAGSVIHSLSGEQDVFRMGGLRKYVGLTFATMLIGSLALSGIPP 400 Query: 401 LNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPR 460 G+ S+ + + G + ++ +T L ++ + F G R Sbjct: 401 FAGYYSKDLILVTAYQQGP--------LGQMLWLIGVLTAVLTAFYSFRLLFLVFGGKER 452 Query: 461 -----STHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVA 515 HA E P TM + +L+L+ V + +A Sbjct: 453 FHSESQGHAVHPHESPLTMTIPLLVLSIATVFAGWAGE-------------HYGILQYLA 499 Query: 516 SGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENA 575 + L L L L G+ W YG E++ Sbjct: 500 QELPLPHVHEGEGGFSENALKGLSVAGALFGILIAWAL----------------YGKESS 543 Query: 576 MAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVS 635 + + + V + + D + + D V+ + Sbjct: 544 IPAAFARNLSFFYKVSLHKWYFDEFYDAVFVRPSFAIGRLFWQEVDKGVID-GVVNGVAH 602 Query: 636 ATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLIAI 670 + ++ LQSG + Y + + L+ Sbjct: 603 FFRNSGGGLRRLQSGQIQNYAMAMAIGAFGLVAFY 637 >UniRef50_Q1IS54 Proton-translocating NADH-quinone oxidoreductase, chain L n=2 Tax=Acidobacteria RepID=Q1IS54_ACIBL Length = 710 Score = 394 bits (1014), Expect = e-108, Method: Composition-based stats. Identities = 138/731 (18%), Positives = 258/731 (35%), Gaps = 94/731 (12%) Query: 8 TWSLILYLFASLASLFLLGLD-------RLAIKLSGITSLVGGVIGIISGITQLHAGVT- 59 W + L+ A++F G + + ++ + ++ Sbjct: 7 IWLIPLFPALGAATMFFFGRKLDDEHDKKWVNGICVGAIVLTFLWSCLAVFQYTQYAAVD 66 Query: 60 ------LVARFAPPFEFA---------------DLTLRMDSLSAFMVLVISLLVVVCSLY 98 +V + + +D LS+ +L ++ + ++ +Y Sbjct: 67 HKPFEKVVYTWLGSNTGLMTFKTASGATAEFKAEAGFLLDPLSSIWLLFVTGVGMLIHIY 126 Query: 99 SLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDK 158 S YM+ G ++N+F+ SM+ L++ +N V +E + L S+ L+ K Sbjct: 127 STGYMKHDGG--YYRFFGYLNLFMFSMLTLILGNNYAMMFVGWEGVGLCSYLLIGFYFHK 184 Query: 159 TSIN-AGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRTLSLSP------GLASAVF 211 S + A F G +++ + GS++F + S + Sbjct: 185 KSASTAANKAFITNRIGDAGVLVGMFTIAWYFGSINFTKVTQAARSGIFHTGDYWITFAT 244 Query: 212 LLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTG 270 + F G K+ +PL+ WLP A P+ SAL + MV G++ + + + Sbjct: 245 IALFIGACGKSAQLPLYVWLPDAM-EGPTPVSALIHAATMVTAGVYMVARSNALYI---- 299 Query: 271 LPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHD 330 L +V +GA++A+ L + DIKR+LA+STV +G + LA+G+ Sbjct: 300 LAPNSMKVVAIVGALTAVFAASIGLVQNDIKRVLAYSTVSQLGYMFLALGLG-------- 351 Query: 331 PLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRL-HTHDMEKMGALAKRMPWTAAACL 389 +FH+ HA FK LLFLG+G++I + DM MGAL K++P T Sbjct: 352 ------AFTAGVFHVFTHAFFKALLFLGSGSVIHAMSGEQDMRFMGALRKKIPVTFWTMF 405 Query: 390 IGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVK 449 G LAI+ IPPL GF S+ +S + + + +T + + + Sbjct: 406 AGTLAIAGIPPLAGFFSKDEILWQAWSSNGGTFR-------VLWGIGFLTALMTSLYMFR 458 Query: 450 MYGITFCGAPRSTH--AEEAQEVPNTMIVAMLLLAALCVLIALSASW--------LAPKI 499 + +TF G PR +H E P +M +++LA V + Sbjct: 459 LVYLTFFGQPRMSHEVEHHVHESPKSMTGPLVILAICAVFAGFLGVPHSLGGSNRFEKFL 518 Query: 500 MHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAF 559 + A T T L+L + L L + Sbjct: 519 EPVFANQHTVVAEGAAVPEKTPAKEEKTDYTEYELMLASIGAAGLGWLMANRAYGKADKA 578 Query: 560 RR---------TGDAWACGYGWENAMAPSGNGVMQ------PLRVVFSALFRLRQQLDPT 604 + + Y + A + G + L++ + Sbjct: 579 FKEPINELAPPVYNTLLNKYYVDEAYDYTVLGRCNVGKIRLGALGLGDGLWKFDANVIDG 638 Query: 605 LRLNKGLAHVTAR---AQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVA 661 G A + + D ++ + + ++ +Q G + Y L +V Sbjct: 639 GVNGAGWMTRFAGTLSSWWDKWIIDGVLVNGPAVVARVTSYPVRLVQWGLVQWYALVMVF 698 Query: 662 ALVVLLIAIAV 672 +V L+ + Sbjct: 699 GVVGLVWYYVI 709 >UniRef50_C6PUG7 NADH dehydrogenase (Quinone) n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PUG7_9CLOT Length = 594 Score = 394 bits (1014), Expect = e-108, Method: Composition-based stats. Identities = 181/599 (30%), Positives = 322/599 (53%), Gaps = 27/599 (4%) Query: 78 DSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAM-GFFMNIFIASMVALLVMDNAFW 136 D +S F ++I ++ +YS+ Y EY+GK + M +F ASM+ +++ ++ Sbjct: 13 DPISIFFAIIIFVVFAPIFIYSIGYTAEYKGKYSVKYNFMLMLLFAASMLCVVLARDSIT 72 Query: 137 FIVLFEMMSLSSWFLVIA-RQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFA 195 FIV +E+MS S+FLV+ ++K +I +G++YF + H + +MI F + + +GS+ F Sbjct: 73 FIVFWEVMSAVSFFLVVYEYKNKENIRSGIMYFIMTHISGLFLMIMFAFLYKYTGSISFD 132 Query: 196 SFRTLSLSPGL--ASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKI 253 F LS + +F A GFGAKAG++PLH WLP+AHP+APS+ASALMSGVM+K+ Sbjct: 133 KFYQLSNDFTISQKYIIFTFAILGFGAKAGLLPLHGWLPKAHPSAPSNASALMSGVMLKV 192 Query: 254 GIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVG 313 I+G+++V + L ++++ A++A+ VL AL ++DIK+LLA+S+ EN+G Sbjct: 193 AIYGLIRVTFTFIKVLPLKAALLLVLLG--AVTAIFSVLNALVQKDIKKLLAYSSAENIG 250 Query: 314 IILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEK 373 II+ +G+++V +L+ + L+ ALFH+ NHA+FK LLF AG+++ T +M + Sbjct: 251 IIISTLGLSLVFYNLNLNSFANLTLIAALFHIFNHAIFKSLLFASAGSVLYSTGTKNMNE 310 Query: 374 MGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSL-FSLSRVEAVALQLAGPIA 432 +G L K+M + A IG AISAIPPLNGF SE ++ + ++ L + Sbjct: 311 LGGLYKKMKFAAICAFIGTAAISAIPPLNGFASEILIFKCFIIGTASIKGTWTALIIIGS 370 Query: 433 MVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSA 492 +++A+T G+ + VK +GIT+ GAPRS A A ++P +M + + +LA LC++ + + Sbjct: 371 GLIIALTSGVTLYASVKSFGITYLGAPRSEKAINAHKIPLSMNIGLGILALLCIISGVFS 430 Query: 493 SWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWC 552 ++ I ++++ NT + S I + +L L++ L Sbjct: 431 PFIINLISKVSNSILNTNLPLMNSEINNEIIIVSSIFVIITAILALISKVL--------- 481 Query: 553 RSRRAAFRRTGDAWACGYGW-ENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGL 611 + W CG+ ++ M S NG+ QP +F + R +++ + Sbjct: 482 --NNKKATVIKETWGCGFNNVKSNMQYSANGLSQPSTRIFGKVVRYEKEVKNGYSI---- 535 Query: 612 AHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLIAI 670 ++ + +V ++ + + G ++Y Y+ +L+V ++ + Sbjct: 536 ----LLKDKVLDNIEKYIYGSVVKVVYYISLRVTKIHFGKIQVYVSYIFVSLLVTVLIV 590 >UniRef50_A3ERI6 NADH dehydrogenase (Quinone), chain L n=8 Tax=cellular organisms RepID=A3ERI6_9BACT Length = 639 Score = 394 bits (1012), Expect = e-108, Method: Composition-based stats. Identities = 142/693 (20%), Positives = 259/693 (37%), Gaps = 84/693 (12%) Query: 3 ALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVA 62 + + LI +L L + G S V + + + L Sbjct: 4 IVLIPLLPLIGFLIVGLFWPYFKGKGHWVTVPLVALSAVLSIRAFMDTLNGPPIHFVLYN 63 Query: 63 RFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFI 122 +++ +D L+A M+++++++ + LY++ YM+E G ++++F Sbjct: 64 WIHSGHFSVPISIMIDHLTAAMLVMVTVVSTLVHLYTVGYMKEDSG--YDRFFSYISLFT 121 Query: 123 ASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKT-SINAGMLYFFIAHAGSVLIMIA 181 +M+ LL+ DN +E + S+ L++ ++ S A F + G ++ Sbjct: 122 FAMIVLLLSDNLLELFFGWEGVGFCSYILIVHWYERRPSWMAANKAFIMNRIGDFGFLLG 181 Query: 182 FLLMGRESGSLDFASFRTLSLSP-----------------GLASAVFLLAFFGFGAKAGM 224 L G+LD+ S + + + LL F G K+ Sbjct: 182 IFLTYNVFGTLDYEGIFRAIPSHLHDTIFPFSVFHSTESASVLTVIALLLFVGAVGKSAQ 241 Query: 225 MPLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIG 283 +PLH WLP A P+ SAL + MV GIF I +++ ++V G Sbjct: 242 IPLHPWLPDAM-EGPTPISALIHAATMVTAGIFMIARLSPIY----NASPTALMVVGWTG 296 Query: 284 AISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALF 343 AI+A + AL ++DIK+++A+ST+ +G +++A GV +F Sbjct: 297 AITAFVAATIALTQRDIKKIVAYSTMSQLGYMVMACGVG--------------AYGAGIF 342 Query: 344 HLLNHALFKGLLFLGAGAIISRL-HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLN 402 HLL H FK LLFL AG++I L D+ +MG L+K M T L+G LA+S IPP Sbjct: 343 HLLTHGFFKALLFLAAGSVIHSLNGEQDIFRMGGLSKYMKLTFVTMLLGSLALSGIPPFA 402 Query: 403 GFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPR-- 460 G+ S+ F G I + +T L ++ + F G Sbjct: 403 GYFSKDLILSDAFQSGPR--------GQIFWAIGLITAVLTAFYTFRLIFMVFTGKENFS 454 Query: 461 --STHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGI 518 H E P M + +++L+ V WL + + + + + Sbjct: 455 NDGHHGHAPHESPLVMTIPLVILSFGAVFAG----WLGDRFDIVGYLSQSMTVPHLMETS 510 Query: 519 ALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAP 578 + GT + +L + +A L YG + + Sbjct: 511 GISDGTLKMISVLAGVLGISVAFFL--------------------------YGRPSGVPL 544 Query: 579 SGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQ 638 + + +PL + + + D + + D ++ I S+ Q Sbjct: 545 ALSKSFRPLFNLSRNKWYFDEIYDAVFTRPAIFLSHILWKEVDKGVID-MIVNNIASSCQ 603 Query: 639 RLAKEIQHLQSGDFRLYCLYVVAALVVLLIAIA 671 ++ LQ+G + Y L + L ++ Sbjct: 604 SAGASLRRLQTGQLQNYALVMALGLFGMVSIFI 636 >UniRef50_Q55429 NAD(P)H-quinone oxidoreductase chain 5 n=19 Tax=cellular organisms RepID=NU5C_SYNY3 Length = 681 Score = 393 bits (1011), Expect = e-107, Method: Composition-based stats. Identities = 149/741 (20%), Positives = 265/741 (35%), Gaps = 130/741 (17%) Query: 1 MDALQLLTWSLILYLFASLASLFLLGLD--------RLAIKLSGITSLVGGVIGIISGIT 52 M+ L L W + + + + + R + I+ L ++ + + Sbjct: 1 MELLYQLAWLIPVLPLFGATVVGIGLISFNQATNKLRQINAVFIISCLGAALVMSGALLW 60 Query: 53 QLHAGVTLVARFAPPFEFADLTL----RMDSLSAFMVLVISLLVVVCSLYSLTYMREYEG 108 G A+ L +D LSA M+++++ + ++ +Y+ YM G Sbjct: 61 DQIQGHASYAQMIEWASAGSFHLEMGYVIDHLSALMLVIVTSVALLVMIYTDGYMAHDPG 120 Query: 109 KGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSIN-AGMLY 167 ++++F +SM+ L++ N + +E++ + S+ L+ D+ + A Sbjct: 121 --YVRFYAYLSLFASSMLGLVISPNLVQVYIFWELVGMCSYLLIGFWYDRKAAADACQKA 178 Query: 168 FFIAHAGSVLIMIAFLLMGRESGSLDFASFRTLS--------LSPGLASAVFLLAFFGFG 219 F G +++ L + +GS DF + LS +A+ + +L F G Sbjct: 179 FVTNRVGDFGLLLGILGLYWATGSFDFGTIGERLEGLVSSGVLSGAIAAILAILVFLGPV 238 Query: 220 AKAGMMPLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGIL 278 AK+ PLH WLP A P+ SAL + MV G+F + ++ Sbjct: 239 AKSAQFPLHVWLPDAM-EGPTPISALIHAATMVAAGVFLVARMYPVFEPI----PVVMNT 293 Query: 279 VMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGL 338 + G +A LG AL + DIK+ LA+ST+ +G +++A+G+ Sbjct: 294 IAFTGCFTAFLGATIALTQNDIKKGLAYSTISQLGYMVMAMGIG--------------AY 339 Query: 339 LGALFHLLNHALFKGLLFLGAGAIISRLH---------THDMEKMGALAKRMPWTAAACL 389 LFHL+ HA FK +LFL +G++I + DM MG L K MP TA L Sbjct: 340 SAGLFHLMTHAYFKAMLFLCSGSVIHGMEGVVGHDPILAQDMRIMGGLRKYMPITATCFL 399 Query: 390 IGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVK 449 IG LAI IPP GF S+ F + P+ + T G+ + Sbjct: 400 IGTLAICGIPPFAGFWSKDEILGLAFQAN-----------PLLWFVGWATAGMTAFYMFR 448 Query: 450 MYGITFCGAPRS--------------------------------------THAEEAQEVP 471 MY +TF G R H+ E E P Sbjct: 449 MYFMTFEGGFRGNDQEAKDGVLQFYGLLPNFGPGAMNVKELDHEAGHDDHGHSSEPHESP 508 Query: 472 NTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTP 531 TM ++ LA VLI L A + HA + Sbjct: 509 LTMTFPLMALAVPSVLIGLLGRPWANQFEAFIHAPGEVVEHAAEFEWGEFYVMAGNSIGI 568 Query: 532 SLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVF 591 +L+ + + ++ W + + + L + Sbjct: 569 ALIGITVASLM----------------------YWQHKFDPKVLAEKFPS-----LYQLS 601 Query: 592 SALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGD 651 + D +G V + + + + T + +++L++G Sbjct: 602 LNKWYFDDLYDKLFV--QGSRRVARQIMEVDYKVIDGAVNLTGLVTLVSGEGLKYLENGR 659 Query: 652 FRLYCLYVVAALVVLLIAIAV 672 + Y L V A++ +I ++ Sbjct: 660 AQFYALIVFGAVLGFVIVFSL 680 >UniRef50_Q8M9U5 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic n=5 Tax=Viridiplantae RepID=NU5C_CHAGL Length = 670 Score = 393 bits (1009), Expect = e-107, Method: Composition-based stats. Identities = 140/685 (20%), Positives = 261/685 (38%), Gaps = 77/685 (11%) Query: 6 LLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFA 65 + + +F + + R K G S+ + +I + + ++ + Sbjct: 11 IPILPVFPSIFIGIGLMSFRKSFRNLRKFVGSMSIAFMFLTLILSLLFFNDQLSESYSYR 70 Query: 66 PPFEFA-------DLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFM 118 F + D+ +D L++ M+++++ + V +YS YM +G ++ Sbjct: 71 FLFPWLSTKNLTLDIGYLIDPLTSIMLVLVTSVAVTVMIYSDGYMLHDQG--YIRFFAYL 128 Query: 119 NIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKT-SINAGMLYFFIAHAGSVL 177 ++F ASM+ L+V N V +E++ + S+ LV + + +A F G Sbjct: 129 SLFTASMLGLIVSPNLIQVYVFWELIGMCSYLLVGFWSTRPTAASACQKAFITNRVGDFG 188 Query: 178 IMIAFLLMGRESGSLDFASFRT--------LSLSPGLASAVFLLAFFGFGAKAGMMPLHS 229 +++ L +GS F + +L+ L +L F G AK+ PLH Sbjct: 189 LLLGILGFYWLTGSFQFDIIQDRLNELLLTNNLNFTLFIISSVLLFLGPIAKSAQFPLHI 248 Query: 230 WLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISAL 288 WLP A P+ SAL + MV GIF + ++ L IL+ GAI+AL Sbjct: 249 WLPDAM-EGPTPISALIHAATMVAAGIFLVARLLPIF----QLSPLLMILIAFTGAITAL 303 Query: 289 LGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNH 348 LG A+A+ D+KR LA+ST+ +G ++L +G+ G A+FHL+ H Sbjct: 304 LGACLAVAQTDLKRGLAYSTMSQLGYMMLGLGIG--------------GYQAAIFHLITH 349 Query: 349 ALFKGLLFLGAGAIISRL---------HTHDMEKMGALAKRMPWTAAACLIGCLAISAIP 399 A K LLFLG+G++I + + +++ MG L K MP T LIG L++ IP Sbjct: 350 AYSKALLFLGSGSVIHSMEPVVGYDPNKSQNIDYMGGLRKYMPITGVTFLIGTLSLCGIP 409 Query: 400 PLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAP 459 P F S+ F P+ + +T GL ++Y +TF G Sbjct: 410 PFACFWSKDEIIADAF-----------FHLPLLGFIAWLTAGLTGFYMFRLYLLTFEGEF 458 Query: 460 R------STHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPAT 513 R S+ E E +M + ++LL + I + I +T Sbjct: 459 RAHKNLKSSSLEYPHESSFSMTLPLILLMFPTIFIGFLGLPY--NLGFIQSQILSTWLVG 516 Query: 514 VASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWE 573 + + T + + + L + + F + + G+ Sbjct: 517 PSIDLNSSSNWIDFFKTSATSVGIAFLGICFSFLLYSPKNASNRDFNQISNPVPKGF--- 573 Query: 574 NAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPI 633 + ++ + + + T K + ++ + + + Sbjct: 574 ------LSSYVKSFYNWSLNRAYIDKFYELTWI--KWCGIFAQFTSYLDRWFFDGFVNGV 625 Query: 634 VSATQRLAKEIQHLQSGDFRLYCLY 658 T + +++ ++G Y Sbjct: 626 GLLTLISGEALRYGENGKVSSYLFV 650 >UniRef50_Q6APE8 Probable hydrogenase, component B-formate hydrogenlyase subunit 3 n=1 Tax=Desulfotalea psychrophila RepID=Q6APE8_DESPS Length = 652 Score = 393 bits (1009), Expect = e-107, Method: Composition-based stats. Identities = 224/671 (33%), Positives = 349/671 (52%), Gaps = 22/671 (3%) Query: 3 ALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVA 62 + + SL + + SL + I + VG IGI + LH V Sbjct: 1 MMNIFLLSLTVLFVGGIFSLLSYRHFNVMKVGYVIITAVGCAIGIYAITIPLHGAVVPSF 60 Query: 63 RFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAM-GFFMNIF 121 P L+ +D+LSAF ++ I ++ + +LYS YM + E KG + FF N+ Sbjct: 61 S-RPWLHLFTLSFSLDALSAFFLIPIFVVCPLAALYSYHYMDKIEEKGRIGVSFFFFNLL 119 Query: 122 IASMVALLVMDNAFWFIVLFEMMSLSSWFLVIA-RQDKTSINAGMLYFFIAHAGSVLIMI 180 + SM + DN F++++E+MSLSS+FLVI Q++ + AG +YF A AG++ I+ Sbjct: 120 LISMALVTAADNIISFLLVWELMSLSSFFLVIHDYQEEDTRRAGYIYFVFAQAGAMFIIA 179 Query: 181 AFLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPS 240 A L ++G DFA+F +L + VF LA GFG+KAG+ PLH WLP AHPAAP Sbjct: 180 ALALAYSQTGIHDFAAFA--TLPAHIKLIVFFLALVGFGSKAGIFPLHMWLPHAHPAAPC 237 Query: 241 HASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDI 300 H SA+MSGVM+K+GI+GI+++ ++L L G V+ +G IS +LGV+YAL +QDI Sbjct: 238 HISAIMSGVMIKMGIYGIIRLYVEL---EDTSLIIGQTVLTLGMISGILGVVYALGKQDI 294 Query: 301 KRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAG 360 K++LA+S+VEN+G+IL+ G+ M+G+S + ++ G G L H+LNH+LFK LLFLGAG Sbjct: 295 KKVLAYSSVENIGVILIGAGIGMMGMSTGNMVMASFGFAGCLLHVLNHSLFKTLLFLGAG 354 Query: 361 AIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRV 420 AI+ + T ++++G L KR+P T + L G ++IS +PP NGFISE+ + F + Sbjct: 355 AIVQKTGTRRLDELGGLIKRLPLTGKSFLAGSVSISGLPPFNGFISEFLIYYGAFHGLSL 414 Query: 421 EAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLL 480 + A A ++++ LA+ GGLA CF +M GI F G PR+ A +A E TM + M+ Sbjct: 415 KGSAFLFAM-LSILALAIIGGLAASCFTRMMGIIFLGEPRTAKAAKATEAGFTMTLPMIF 473 Query: 481 LAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLA 540 LAA C+ I L + + + P + G T + +L L L Sbjct: 474 LAASCLFIGLFPAPFVGIVFSALASIPALTP---------IDGAEVTLLAENLGLAARLF 524 Query: 541 MPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWEN-AMAPSGNGVMQPLRVVFSALFRLRQ 599 + +L L R W C + + M +G + F +++ Sbjct: 525 LAVLIFSTLLRKLLYRNKVVVQAPTWGCAFAQPSVKMQYTGTSYAMSIIAFFRPFIQIKT 584 Query: 600 QLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYV 659 R+ T + + +I IV+ + + +Q G +LY Y+ Sbjct: 585 NYSGIKRIFP---RKTTYKTEVDDIAEVCLIERIVTPLLYFLGKFRWIQHGHIQLYIAYI 641 Query: 660 VAALVVLLIAI 670 ++VLL+ + Sbjct: 642 AVTIIVLLLCV 652 >UniRef50_UPI00003837CC COG1009: NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI00003837CC Length = 758 Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats. Identities = 132/586 (22%), Positives = 232/586 (39%), Gaps = 40/586 (6%) Query: 1 MDALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTL 60 M + LL + IL S+ + L R + + I++ QL G ++ Sbjct: 1 MSSNTLLAAAAILPFLGSVLAGALPSRARNVAAALAGLVTLTSLGCILALTPQLAGGSSV 60 Query: 61 VARFAP-PFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMN 119 V P LR+D L+ +++ + + LY+ YM + + Sbjct: 61 VHAIDWLPSLGVRFVLRLDGLAWLFSVLVLAIGALVVLYARYYMS--PADPVPRLFAYFL 118 Query: 120 IFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSIN-AGMLYFFIAHAGSVLI 178 F+ +M+ +++ N ++ +E+ S+ S+ L+ D + + I AG + + Sbjct: 119 AFVGAMLGIILSGNLIQLVLFWELTSIVSFLLIGYWYDNAAARDGARMSLTITAAGGLCL 178 Query: 179 MIAFLLMGRESGSLDFASFRTLS---LSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAH 235 ++ +L+GR GS D + + L +L G K+ P H WLPRA Sbjct: 179 LVGTILIGRIVGSYDLETVLASGDTIRNSSLYLPALVLVLAGALTKSAQFPFHIWLPRAM 238 Query: 236 PAAPSHASA-LMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYA 294 AAP+ SA L S MVK GIF ++++ L W +V IG + L+G A Sbjct: 239 -AAPTPISAYLHSATMVKAGIFLMIRLWPVLAGTDA----WYWIVGTIGMATMLIGSWSA 293 Query: 295 LAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGL 354 + + D+K LLA+ST+ + + ++L L + + ++ A+FH +NHA FK Sbjct: 294 IFQHDLKGLLAYSTISH-----------LGLITLLLGLDSPLAVVAAIFHTVNHATFKAS 342 Query: 355 LFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSL 414 LF+ G I T DM ++ L + MP+TA ++ A++ +P LNGF+S+ Sbjct: 343 LFMAVGIIDHETGTRDMRRLSGLWRAMPYTATLAMVAAAAMAGVPLLNGFLSKEMFLSEA 402 Query: 415 FSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTM 474 + L L V+ + ++ ++ TF G P EE E M Sbjct: 403 VDNMGDHPIHLALP-----VLATLASAFTMLYSLRFIRQTFFGRPPHDLPEEPHEPVRWM 457 Query: 475 IVAMLLLAALCVLIALSASW-LAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSL 533 + + +L C+ I L + + P + A + I Sbjct: 458 RIPIEMLVLTCIAIGLVPNLTIGPALGRAVRAVLGDATPPYSLAIWHGFNA--------- 508 Query: 534 LLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPS 579 L + + + G+ RR G A G + Sbjct: 509 -PLAMSVVAMGGGIALYVLFGRRINTNPRGGPLADGPARRGLAVRT 553 >UniRef50_B0SZ37 Proton-translocating NADH-quinone oxidoreductase, chain L n=7 Tax=Alphaproteobacteria RepID=B0SZ37_CAUSK Length = 694 Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats. Identities = 148/738 (20%), Positives = 260/738 (35%), Gaps = 115/738 (15%) Query: 3 ALQLLTWSLILYLFASLAS-LFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAG---- 57 L+T ++ L A++ + LF + +A + +L+ +Q G Sbjct: 1 MQTLVTILVLAPLVAAIIAGLFGRRIGDVASQAITTGALILSCALGWYVFSQWTWGHMEA 60 Query: 58 --VTLVARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMG 115 V L+ ++ ++R+D+LSA M++V++ + + +YS YM E K Sbjct: 61 FTVDLLPFIHVGNFVSNWSIRIDALSAVMLIVVTTVSALVHVYSWGYMAEDPDK--PRFF 118 Query: 116 FFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKT-SINAGMLYFFIAHAG 174 ++++F +M+AL+ + +E + L+S+ L+ K + A + F + G Sbjct: 119 AYLSLFTFAMLALVTAADFMQLFFGWEGVGLASYLLIGFWYKKPTASAAAVKAFVVNRVG 178 Query: 175 SVLIMIAFLLMGRESGSLDFASFRTLSLSP------------GLASAVFLLAFFGFGAKA 222 + + G++ F L + L L F G K+ Sbjct: 179 DFGFALGIMTTFWAYGTIQFHELFPLIAASAPRTWEFAGHVFPLVDIACFLLFVGAMGKS 238 Query: 223 GMMPLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMA 281 LH+WLP A P+ SAL + MV G++ + ++ +V Sbjct: 239 AQFFLHTWLPDAM-EGPTPVSALIHAATMVTAGVYMLCLLSPMF----EYAPIAKNIVTV 293 Query: 282 IGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGA 341 IGAI+AL L + DIKR++A+ST +G + A G+ A Sbjct: 294 IGAITALFAATVGLTQNDIKRVIAYSTCSQLGYMFFAAGIG--------------AYQAA 339 Query: 342 LFHLLNHALFKGLLFLGAGAIISRL-HTHDMEKMGALAKRMPWTAAACLIGCLAISAI-- 398 +FHL HA FK LLFLGAG++I + H DM K GAL K +P T A IG +AI+ + Sbjct: 340 MFHLFTHAFFKALLFLGAGSVIHGMHHEQDMRKYGALTKLLPVTFIAMTIGTIAITGLGF 399 Query: 399 PP----LNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGIT 454 PP GF S+ ++ F+ + + AL A ++ + GL ++ T Sbjct: 400 PPLHLGFAGFYSKDTIIEAAFAAGQANSTAL-----FAWIIGVLVAGLTSFYSWRLAFFT 454 Query: 455 FCGAPR----------------------------------------STHAEEAQEVPNTM 474 F G R H + E P M Sbjct: 455 FNGKARWGHDDHHAHDAHSAHGHEDLVHDETHDEPLADDHAHDDHRHGHDHKPHESPLVM 514 Query: 475 IVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLL 534 +V +++L+ V + A A ++ Sbjct: 515 LVPLIVLSIGAVFAGF---LFTDYFVGHGQAEFWRGAIYNAPTNHVLHEAHEVAEWVKWS 571 Query: 535 LLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSAL 594 L+ + L+ +Y + + + PL V F Sbjct: 572 PLIASIIGLIVAVYVYLIKGN------------------ERLGAALAARNGPLYVFFYNK 613 Query: 595 FRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRL 654 + + T + D + + + + + LQSG Sbjct: 614 WFFDELYQATFVRLAKFLGDLFWKGGDQKLIDGFGPDGVSAVSYEVGRRTGKLQSGYLYH 673 Query: 655 YCLYVVAALVVLLIAIAV 672 Y ++ + LL+ V Sbjct: 674 YAFVMLIGVAGLLLFALV 691 >UniRef50_C1SM60 NADH dehydrogenase subunit L n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SM60_9BACT Length = 638 Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats. Identities = 148/685 (21%), Positives = 261/685 (38%), Gaps = 73/685 (10%) Query: 4 LQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVAR 63 L LL + + L ++ L + S V +I TL Sbjct: 6 LTLLGPLVAFLINGLLGRRYIKNLAPIVAIAGVSVSFVCALILFYLVSQGFSVDGTLYTW 65 Query: 64 FAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIA 123 + +D LS+ M++V++ + ++ +YS+ YM + G ++++F Sbjct: 66 VVAGKLSIPFGILVDPLSSIMLIVVTTISLMVHIYSIGYM--HGDPGFWRFFTYLSVFTL 123 Query: 124 SMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKT-SINAGMLYFFIAHAGSVLIMIAF 182 SM+ L++ +N V +E++ LSS+ L+ K + +A F + G I Sbjct: 124 SMLVLVLGNNFLMLFVGWELVGLSSYLLIGFWFHKKSAADACKKAFVMNRIGDFGFYIGL 183 Query: 183 LLMGRESGSLDFASFRTLSLSPGLASAVFLLA--------------FFGFGAKAGMMPLH 228 LL+ S++++ + A F+L F G K+ PLH Sbjct: 184 LLVIVTFRSVNYSDAFNSEAIHHIKEAGFMLFGMKVSLIDLMTFGLFCGAMGKSAQFPLH 243 Query: 229 SWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISA 287 +WLP A P+ SAL + MV G++ + + ++ GA++A Sbjct: 244 TWLPDAM-EGPTPVSALIHAATMVTAGVYMVARCNALF----SEAHMTSQFIVFAGAMTA 298 Query: 288 LLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLN 347 LG L + D+KR+LA+STV +G +++A GV + A+FHL Sbjct: 299 FLGASIGLTQYDLKRILAYSTVSQLGYMIMATGVG--------------AYVAAIFHLFT 344 Query: 348 HALFKGLLFLGAGAIISRLHTH-DMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFIS 406 HA+FKGLLFL +G+++ +H D+ MG L K+MP+T LIGC+AI+ IPPL GF S Sbjct: 345 HAMFKGLLFLCSGSVMHAMHDQLDVRLMGGLKKKMPFTHWTYLIGCIAIAGIPPLAGFWS 404 Query: 407 EWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTH-AE 465 + F+ IA + G+ + Y + F G PR H + Sbjct: 405 KDEILAMTFASGHN----------IAWFVGTAVAGMTAFYMFRSYFLVFQGTPRDQHLHD 454 Query: 466 EAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTF 525 A E P +M ++ LA L + + L + + + +T V + P Sbjct: 455 HAHESPFSMWGPLVFLAFLSIFVGLVFGYPLE------NGYIHTFLGPVLTPAHAHPHHM 508 Query: 526 HTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQ 585 L++L + + +L+ A+ + Sbjct: 509 AHSTATMLMILSIAVAAAGIFVSYLFYVKNF-----------------PALPEKTVKTFK 551 Query: 586 PLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQ 645 PL + + D + D + ++ Sbjct: 552 PLHKFLLNKWYFDELYDFLFVHPIVMISNILWRAFDVNVID-FTVNAFGRVPMWFGGVVR 610 Query: 646 HLQSGDFRLYCLYVVAALVVLLIAI 670 H+Q+G + Y +V ++V + Sbjct: 611 HIQTGRIQTYIFTMVIGIIVFVTIF 635 >UniRef50_Q1Z852 NADH dehydrogenase subunit N n=3 Tax=Vibrionaceae RepID=Q1Z852_PHOPR Length = 646 Score = 390 bits (1003), Expect = e-107, Method: Composition-based stats. Identities = 282/643 (43%), Positives = 403/643 (62%), Gaps = 12/643 (1%) Query: 1 MDALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTL 60 M+ L L+ ++LI Y A+L SL ++ +++++G+ S GG+ G+++G+T + G L Sbjct: 1 MNPLILVLFALICYAIAALVSLVGRKQEQESLRIAGVISAFGGLFGVLAGLTTIVCGDDL 60 Query: 61 VARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNI 120 + + MD LSA MV+VIS++ + S+YS+ Y++EY GKG + N+ Sbjct: 61 ADKLGR-------IVNMDMLSALMVVVISVVTMAASVYSINYLKEYLGKGGWKINILFNV 113 Query: 121 FIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMI 180 F A+M AL+V N FIVL E++SL+SW +VI+ S AG+ YF H SVLIM Sbjct: 114 FAAAMTALVVSANVMLFIVLMEIISLASWLIVISDGSVASKKAGLQYFIADHVASVLIMA 173 Query: 181 AFLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPS 240 AFL++ ++ S +F++F ++ AS VFLLA GFG KA + H WL +A+P APS Sbjct: 174 AFLILSLQANSYNFSAFTHHPVTGTTASLVFLLALAGFGIKAAGIGFHGWLAKAYPIAPS 233 Query: 241 HASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDI 300 + S L+S VMVKIGI+GILKV + L T LWWG LV+ GA+S++LGV+YALAE DI Sbjct: 234 YCSTLISCVMVKIGIYGILKVGVLFLGAT--QLWWGFLVLIFGALSSVLGVMYALAEHDI 291 Query: 301 KRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAG 360 KRLLA+ T+EN+GIIL+ VGV+M+G++ H P L ++GLLGAL+HLLNHA+FKGLL LG+G Sbjct: 292 KRLLAYHTIENIGIILIGVGVSMIGIASHHPTLALLGLLGALYHLLNHAVFKGLLCLGSG 351 Query: 361 AIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRV 420 +I+ R+HT DM+KMG L K M TA LIG LAI A+PPLNGF+SEW+ +QSLFSL + Sbjct: 352 SIVYRMHTKDMDKMGGLGKTMSKTAITFLIGTLAICALPPLNGFVSEWFIYQSLFSLGKT 411 Query: 421 EAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLL 480 +V LAGP MVMLA+TG LA MCFVK+YGI F GAP++ A +EV MI A Sbjct: 412 GSVVNMLAGPFGMVMLALTGALACMCFVKVYGICFAGAPKTEQAATTREVGPAMITATSA 471 Query: 481 LAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFH-TQVTPSLLLLLLL 539 LA LC ++ + + W+AP IA + + P +VA+G+A+ P ++ ++ + L+ Sbjct: 472 LAVLCAVLGIGSPWIAPYFSAIASSILHIAPVSVANGMAVYPVAADQAILSTPVIAIALV 531 Query: 540 AMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALF--RL 597 + L+P R RR A R+ GD WACGY +E+ M S GV +P+R +F ++ R Sbjct: 532 LLTLVPATLLYAFRQRRLARRQQGDPWACGYQYEHRMTVSAAGVTRPMRHMFGFIYNNRP 591 Query: 598 RQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRL 640 + L L + + + D R + + S Sbjct: 592 QHSLIERYVLPRLCLTTDGSQSAEDNGLDSRKVYFLCSTVALF 634 >UniRef50_Q32RH9 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic n=6 Tax=cellular organisms RepID=NU5C_ZYGCR Length = 702 Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats. Identities = 142/739 (19%), Positives = 269/739 (36%), Gaps = 110/739 (14%) Query: 1 MDALQLLTWSLILYLFASLASLFLL--------GLDRLAIKLSGITSLVGGVIGIISGIT 52 M ++ W + L + L L RL + I +L+ ++ I+ + Sbjct: 1 MQSINQYVWIIPLLPCLTAVILGLGLISTKNATKSQRLGSAILSIGALLVTMLLSITVLW 60 Query: 53 QLHAGVTLVARFAPPF----EFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEG 108 + + + F ++ +D LSA M+++++ + V+ +Y+ YM +G Sbjct: 61 EQVISDSAYRQLVSWIKVDNLFLEIGCLVDPLSAIMLVLVTTVGVLVMIYTHGYMSHDQG 120 Query: 109 KGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKT-SINAGMLY 167 ++++F ASM+ L++ N +E++ + S+ LV + + A Sbjct: 121 --YVRFFAYLSLFTASMLGLVLSPNLVQVYAFWELVGMCSYLLVGFWFTRPSAAYACQKA 178 Query: 168 FFIAHAGSVLIMIAFLLMGRESGSLDFASFRTLS--------LSPGLASAVFLLAFFGFG 219 F G +++ L + +GSL+F + + + L + +L F G Sbjct: 179 FITNRVGDFGLLLGILALYWLTGSLEFDIVASRAHQLLVENSANTVLLTVCCVLLFLGPI 238 Query: 220 AKAGMMPLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGIL 278 AK+ PLH WLP A P+ SAL + MV G++ + ++ + Sbjct: 239 AKSAQFPLHVWLPDAM-EGPTPISALIHAATMVAAGVYLVARLLPLF----QEVPLVMDI 293 Query: 279 VMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGL 338 V G I+A+LG ALA++D+K+ LA+ST+ +G ++LA+GV Sbjct: 294 VAWTGGITAVLGATVALAQKDLKKGLAYSTMSQLGYMILALGVG--------------SY 339 Query: 339 LGALFHLLNHALFKGLLFLGAGAIISRLH---------THDMEKMGALAKRMPWTAAACL 389 LFHL+ HA K LLFLG+G++I + + +M MG L MP T L Sbjct: 340 QAGLFHLITHAYSKALLFLGSGSVIHGIEPVVGYNPNQSQNMTYMGGLRSYMPITGVTFL 399 Query: 390 IGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVK 449 IG L++ +PP F S+ + P+ ++ +T GL + Sbjct: 400 IGTLSLCGVPPFACFWSKDEILADAWHK-----------LPVLGLLAWLTAGLTAFYMFR 448 Query: 450 MYGITFCGAPRS------------------------------------THAEEAQEVPNT 473 MY ITF G R + + E N Sbjct: 449 MYFITFEGTFRGSSLISNKSSKQTLSVNKMDSVFALSNQTKDNTSLKASKHLDPHESSNA 508 Query: 474 MIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSL 533 M + +++L +LI + L + + G +T Sbjct: 509 MTIPLIVLTIPTILIGFIGAPLPNGLTGSSLLSHWLYLDNTEIVELSTNGWTEFAITALP 568 Query: 534 LLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSA 593 + + + + + + R + D A G+ ++ + Sbjct: 569 SVSIGILGAFIAWIVYGPHVDRLKNNPVSIDPSAEGWT---------GILLNSIYNWSLR 619 Query: 594 LFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFR 653 + + D T + + + ++ T + ++ +SG Sbjct: 620 RAYIDEIYDQTFVWATR--SSANALAWFDQWTIDGIVNVGGLFTLLGGEGTRYTESGRTS 677 Query: 654 LYCLYVVAALVVLLIAIAV 672 Y + LV ++IA + Sbjct: 678 AYIFVLGIGLVFVMIAAVL 696 >UniRef50_A1ALQ0 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ALQ0_PELPD Length = 639 Score = 389 bits (1001), Expect = e-106, Method: Composition-based stats. Identities = 153/647 (23%), Positives = 260/647 (40%), Gaps = 56/647 (8%) Query: 30 LAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAPPFEFADLTLRMDSLSAFMVLVIS 89 +A L ++ LV V+ T TL A D+ +D SA M LV++ Sbjct: 33 IACGLPALSFLVTLVLYSSLVATGQPIAETLYTWVALDPLNVDVAFYLDQASAVMCLVVT 92 Query: 90 LLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSW 149 + + LYS+ YM E + ++N+F+ M+ L++ N +E + L+S+ Sbjct: 93 GVGTLIHLYSVGYMSHDEDQ--PRYFAYLNLFLFFMLMLVLGKNMIMLFAGWEGVGLASY 150 Query: 150 FLVIARQ-DKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRT----LSLSP 204 L+ D AGM F + G ++A LL+ S +LDF L Sbjct: 151 LLIGFWYQDDEKSAAGMKAFIVNRVGDTGFVLAALLIFSYSHTLDFQGINAYFGTAGLPV 210 Query: 205 GLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAM 263 + + +L G K+ +PLH WLP A A P+ SAL + MV G++ + ++ Sbjct: 211 STMNLIGILLLIGACGKSAQIPLHVWLPDAM-AGPTPVSALIHAATMVTAGVYLLSRMNG 269 Query: 264 DLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAM 323 LL G +VM GA++A +G L + ++K++LA+ST+ +G + +A G+ Sbjct: 270 VLLQAPGAMQ----VVMWGGALTAFVGATMGLTQYNLKKVLAYSTMSQIGYMFMACGLG- 324 Query: 324 VGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLH-THDMEKMGALAKRMP 382 A+FHL +HA FK LFLGAGA++ LH DM KMG LAK+MP Sbjct: 325 -------------SFSAAMFHLYSHAFFKACLFLGAGAVLHALHGEEDMRKMGGLAKKMP 371 Query: 383 WTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGL 442 T L G LA+ +PP GF S+ S F+ + + A ++ AV G+ Sbjct: 372 LTFVTFLAGSLALCGVPPFAGFFSKDEILWSAFASAHGGSTA-------LWLVGAVAAGM 424 Query: 443 AVMCFVKMYGITFCGAPRSTH--AEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIM 500 + +TF G E P +M + +++L V P+++ Sbjct: 425 TSFYMFRAIIMTFFGQDNVPAKLKHGIHEPPFSMAIVLIILGVSSVAAGFIG---LPQVL 481 Query: 501 HIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFR 560 F + + + L+ + + L G++ W Sbjct: 482 ADKFGFGSPFFSFLEPVFGHHALKAGVTHQTELMFMGISIAIALGGIFLAWVF------- 534 Query: 561 RTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQS 620 YG A+ + + S + + + + + Sbjct: 535 ---------YGLNPALPEAIKKKAGCIYTTISQGYYFDAIYEKVIVKSLDTLSDSVLYNI 585 Query: 621 TEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLL 667 E + I + + A + +QSG+ + Y LY +A L +++ Sbjct: 586 AEKLLNYVTIVKAGATARYSANLLSRMQSGNVQAYVLYALAGLALII 632 >UniRef50_A5UVF8 Proton-translocating NADH-quinone oxidoreductase, chain L n=5 Tax=Chloroflexaceae RepID=A5UVF8_ROSS1 Length = 654 Score = 389 bits (1001), Expect = e-106, Method: Composition-based stats. Identities = 154/707 (21%), Positives = 251/707 (35%), Gaps = 93/707 (13%) Query: 4 LQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGV----- 58 + + W + + L+ A + + I+ + L Sbjct: 1 MNWIIWLIPAFPLIGFLLNALVVRRERAAGILASVMVGLSFAATIAAMVVLEGAPSGAKR 60 Query: 59 ---TLVARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMG 115 TL L D L+A M L+I+ + + +YS+ YM + Sbjct: 61 LTWTLWEWIGIADFRVAFGLLFDPLTAVMALLITGVGGLIHIYSIGYM--HGDVRPVRFF 118 Query: 116 FFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSI-------NAGMLYF 168 FMN+F+ +M+ L++ DN + +E + L S+ L+ D+ S+ A + F Sbjct: 119 AFMNLFVFAMLMLVMADNLLLLFLGWEGVGLCSFLLIGHYFDRRSVPPGINPSEAAVKAF 178 Query: 169 FIAHAGSVLIMIAFLLMGRESGSLDFASFRTLSLSP---------------------GLA 207 + G ++ A + G+L F LS+S L Sbjct: 179 VVNRVGDAAMLAALFAIFTNFGTLSFYDNPQLSISGYLDQAIVVAGETVDLGAFGQLPLM 238 Query: 208 SAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLL 266 + + LL K+ PL++WLP A A P+ SAL + MV G++ I++ Sbjct: 239 TGITLLMLVAVAGKSAQFPLYTWLPDAM-AGPTPVSALIHAATMVTSGVYLIVRNHTLFD 297 Query: 267 AQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGL 326 W V+ IG ++A +G A+A+ DIKR+LA+STV +G ++ AVG+ Sbjct: 298 QPASAAPW----VLVIGVMTAFIGATAAVAQLDIKRVLAYSTVSQLGYMVAAVGMG---- 349 Query: 327 SLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLH-THDMEKMGALAKRMPWTA 385 + ++HLL H LFK LLFL AG++I + DM +MG L +P T Sbjct: 350 ----------AYVAGMYHLLTHGLFKALLFLAAGSVIHGIGDHQDMRRMGGLRNALPTTF 399 Query: 386 AACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVM 445 +IG LA+S I PL GF S+ + P+A +ML +T + Sbjct: 400 RLYVIGALALSGIFPLAGFWSKDEIIAHAW---------FDARSPLAAIMLILTSAVTAF 450 Query: 446 CFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHA 505 + G+ F G PR E M M+ LA V+ L + Sbjct: 451 YMGRQIGMVFFGRPRDPTI-HGHESGAAMRWTMVALAGGAVVGGLINLPGLHWLNSYLRP 509 Query: 506 FTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDA 565 P G L + L L W R G Sbjct: 510 VLQEPEVIYTVG------------MGILATITTLLSAGAGYLGWKTYARDLEPRIRIGK- 556 Query: 566 WACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFW 625 + L + L A V Sbjct: 557 -----------EDPMFRYLGDLWRGMEIGWGLDWLYQRVFVRPYRAASVFLSDVVDREAI 605 Query: 626 DERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLIAIAV 672 D+ ++ RLA ++ LQ+G R Y L + +++++ A+ Sbjct: 606 DQVLVDGTARGLARLAHGLRALQTGYIRTYALMFLFGVILVVAFFAL 652 >UniRef50_Q2FKT7 NADH dehydrogenase (Quinone) n=1 Tax=Methanospirillum hungatei JF-1 RepID=Q2FKT7_METHJ Length = 643 Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats. Identities = 187/673 (27%), Positives = 331/673 (49%), Gaps = 37/673 (5%) Query: 3 ALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVA 62 ++ + ++LY + + L + + +S I GG++ + + L Sbjct: 1 MSEIFLFIILLYALSGVIPLCIRK--KRIWSVSSIIMGGGGILLTLFSLPFLLVSSAKTI 58 Query: 63 RFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMRE-YEGKGAAAMGFFMNIF 121 F + + + +D LSA +++ LL + +LY+ Y+ + + + + +F Sbjct: 59 LFQGAWVTFPIRIGIDRLSALFCILLGLLSLAVALYTPGYLDRMHGNRRTYVVSGLIPLF 118 Query: 122 IASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKT-SINAGMLYFFIAHAGSVLIMI 180 + SM+ +++ + F+V +E+M++ S+FLV+ ++ + A + Y + +V + + Sbjct: 119 LLSMLLVIMAETVIAFLVFWELMAILSFFLVLTEFEEEKTRYAALFYLAMTQISTVFVFL 178 Query: 181 AFLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPS 240 LL+ +GS ++ LS S L S FL FFG K+G++P H WLP AHPAAPS Sbjct: 179 GILLIRLGTGSWEYPV--HLSGSDPLISLSFLCLFFGIAIKSGVIPFHKWLPHAHPAAPS 236 Query: 241 HASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDI 300 SALMSG+M+ ++ +++V A WG L++A G ++A+LGV+YAL EQD+ Sbjct: 237 PVSALMSGMMISTALYALIRVVTGFYAPDAA---WGFLILAFGCLTAVLGVMYALKEQDL 293 Query: 301 KRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAG 360 K LLA+S+++N GIIL+ +G+ ++ L ++ + GA+FH ++H LFKGLLFL AG Sbjct: 294 KGLLAYSSIDNTGIILIGIGLWVLFTVFGSQTLALMAIAGAVFHAISHGLFKGLLFLTAG 353 Query: 361 AIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRV 420 ++ T ++++MG + RMPWT IG L+I++IPP +GFI E+ SL Sbjct: 354 SVCQAAGTRNIDEMGGILVRMPWTGGLFFIGVLSIASIPPFSGFIGEFLIIMSLIGGLSE 413 Query: 421 EAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLL 480 + LQ+ + + + ++TG L V FVK +G+TF PRS A++A+EVP M + Sbjct: 414 LSPLLQIVMVVVLSLFSLTGALTVTTFVKAFGLTFLALPRSEGADKAREVPWPMYAGPAV 473 Query: 481 LAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLA 540 LA + + + + + + H + G ++ Sbjct: 474 LALMSAGLGIFSGQVFSLLGHPGLLPDLLGLFLLLLGTSI-------------------- 513 Query: 541 MPLLPGLYWLWCRSRRAAFRRTGDAWACG-YGWENAMAPSGNGVMQPLRVVFSALFRLRQ 599 L + S + R W CG G + M +G+G +P+ F ++R R Sbjct: 514 ------LVYGAVWSYASRKTRITRTWDCGMMGSSSRMEYTGSGFTEPVVRFFGPVYRTRI 567 Query: 600 -QLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLY 658 L ++ L + F++E + P R A + LQ+GD Y LY Sbjct: 568 CTTHEFLDQHQCLFRSGTGSIHLMKFFEEYLYLPAARRIDRYASLVSSLQNGDIDRYVLY 627 Query: 659 VVAALVVLLIAIA 671 V +++L++ + Sbjct: 628 VFCTVLILILILG 640 >UniRef50_Q9XAR5 NADH-quinone oxidoreductase subunit L n=38 Tax=Actinomycetales RepID=NUOL_STRCO Length = 654 Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats. Identities = 145/701 (20%), Positives = 255/701 (36%), Gaps = 102/701 (14%) Query: 3 ALQLLTWSLILYLFASLASLFL-LGLDRLAIKLSGITSLVGGVIGIISGITQLHAGV--- 58 L+ + L ++ L LDR+ + + + V V+G++ L +G Sbjct: 1 MENLIALLVAAPLLGAVVLLCGGRRLDRVGHWIGTLLAAVSFVLGVVLFADLLGSGAEDR 60 Query: 59 TLVARFAPPFEFADL----TLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAM 114 TL R+D LS VL+I+ + + LYS+ YM E + Sbjct: 61 TLTQHLFSWIPVEGFQADVAFRLDQLSMTFVLLITGVGSLIHLYSVAYMEHDERRR--RF 118 Query: 115 GFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSIN-AGMLYFFIAHA 173 ++N+F+A+M+ L++ DN V +E + L+S+ L+ Q K S A F + Sbjct: 119 FGYLNLFLAAMLILVLADNYLLLYVGWEGVGLASYLLIGFWQHKPSAATAAKKAFLVNRV 178 Query: 174 GSVLIMIAFLLMGRESGSLDFASFRTLSLSPGLASAV--------FLLAFFGFGAKAGMM 225 G + + I +LM G+ F GLA+ L+ K+ + Sbjct: 179 GDMGLSIGIMLMFLWFGTFAFGPVLGGHGEAGLAAGADEGKLTAIALMLLLAACGKSAQV 238 Query: 226 PLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGA 284 PL SWL A P+ SAL + MV G++ I++ ++V +GA Sbjct: 239 PLQSWLGDAM-EGPTPVSALIHAATMVTAGVYLIVRSGAIFNGAPDAQ----LVVTIVGA 293 Query: 285 ISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFH 344 ++ L G + A+ DIK+ LA ST+ +G ++LA G+ +G + A+ H Sbjct: 294 VTLLFGAIVGCAKDDIKKALAGSTMSQIGYMVLAAGLG------------PIGYVFAIMH 341 Query: 345 LLNHALFKGLLFLGAGAIISRLH-THDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNG 403 L+ H FK LFLGAG+++ ++ DM + G L K MP T +G LAI P L+G Sbjct: 342 LVTHGFFKAGLFLGAGSVMHGMNDEVDMRRYGGLRKYMPVTFVTFGLGYLAIIGFPGLSG 401 Query: 404 FISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPR--- 460 F S+ ++ F+ E G I + + ++ +TF G R Sbjct: 402 FFSKDKIIEAAFAKGGTE-------GWILGACALLGAAITAYYMTRVMLMTFFGEERWRN 454 Query: 461 -------------------STHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMH 501 + E P M + M++LA V Sbjct: 455 APTPSPAKPDVEPAAETRGTYEPPHPHESPGLMTIPMIVLAVGSVGAG------------ 502 Query: 502 IAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRR 561 AF + + + + + + ++ G+ W + R Sbjct: 503 ---AFFSIGDRFMHWLEPITGHSHGDSPISAGAVTGATVACMVIGVAVAWAQYGRRPVPA 559 Query: 562 TGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQST 621 + L + +R + L Sbjct: 560 VAPRGSLLTRAARR-----------------DLLQDDFNHVVLVRGGEHLTRSLVY---V 599 Query: 622 EPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAA 662 + + V+ ++ L+ ++ LQ+G R Y + + Sbjct: 600 DHTVVDGVVNGTAASVGGLSGRMRRLQNGFARSYAVSMFGG 640 >UniRef50_Q2W3J5 NADH:ubiquinone oxidoreductase subunit 5 n=6 Tax=Alphaproteobacteria RepID=Q2W3J5_MAGSA Length = 642 Score = 388 bits (998), Expect = e-106, Method: Composition-based stats. Identities = 124/689 (17%), Positives = 243/689 (35%), Gaps = 74/689 (10%) Query: 6 LLTWSLILYLFASLASLFLLGL--DRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVAR 63 ++T ++ L L ++ + DR A ++ + V+ + G Sbjct: 1 MITATVFLPLLGAVVAGLFGRFIGDRGAQIVTCALLITSAVLSGLIFQKVALGGEAQTVV 60 Query: 64 FAPPF----EFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMN 119 A + +L++D+L+A M++V++ + +YS+ YM +++ Sbjct: 61 VAEWIRSGTMSVNWSLKVDTLTAVMLIVVTWVSAAVHVYSVGYMSHDP--SIWRFHSYLS 118 Query: 120 IFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKT-SINAGMLYFFIAHAGSVLI 178 +F +M+ L+ DN +E + ++S+ L+ +K + A + F + G Sbjct: 119 LFTFAMLMLVTSDNLVQMFFGWEGVGVASYLLIGFWYEKPSASAAAIKAFVVNRVGDFGF 178 Query: 179 MIAFLLMGRESGSLDFASFRTLSLSPG------------LASAVFLLAFFGFGAKAGMMP 226 + + GS+ F + + + LL F G K+ + Sbjct: 179 ALGIFGVYFLFGSVGFDAIFAAAPEKANATVNFFGGQWHAITICCLLLFVGAMGKSAQLG 238 Query: 227 LHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAI 285 LH+WLP A P+ SAL + MV G+F + +++ +V IGA Sbjct: 239 LHTWLPDAM-EGPTPVSALIHAATMVTAGVFMVARMSPLF----EFSDTALTVVTVIGAA 293 Query: 286 SALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHL 345 +A+ + DIKR++A+ST +G + A+GV+ A+FHL Sbjct: 294 TAIFAATVGCVQNDIKRVIAYSTCSQLGYMFFAIGVS--------------AYQAAIFHL 339 Query: 346 LNHALFKGLLFLGAGAIISRL-HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGF 404 + HA FK LLFLGAG++I + D+ +MG + K + T IG LA++ +P G+ Sbjct: 340 MTHAFFKALLFLGAGSVIHAMSDEQDIRRMGGIWKHVKVTWVLMWIGSLALAGVPFFAGY 399 Query: 405 ISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHA 464 S+ ++ ++ + A + L ++ +TF G PR+ Sbjct: 400 YSKDTILEAAWASHTIAGQG-------AYWLGCTAAFLTAFYSWRLLLLTFHGRPRADEH 452 Query: 465 --EEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVP 522 E P M++ +L LA + + + V + Sbjct: 453 VMAHVHESPAVMLIPLLFLATGALFAGWAG---YDMFVGHHQHDFWRSAILVTEAHPSLE 509 Query: 523 GTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNG 582 H +LL ++ + + G Sbjct: 510 NAHHVPSWVALLPTVVAVSGIALAYLFYVFAPGLPGAL--------------------AG 549 Query: 583 VMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAK 642 + + + + D D + +AT+ +A Sbjct: 550 AFRGVHQFLLNKWYFDELYDMLFVKPAFKLGRGLWQGGDGALIDGVGPDGVAAATRAVAA 609 Query: 643 EIQHLQSGDFRLYCLYVVAALVVLLIAIA 671 ++ QSG Y ++ + + Sbjct: 610 KVARAQSGYLYHYAYAMLIGVAAFVTWYI 638 >UniRef50_Q2S2L2 NADH dehydrogenase I, L subunit n=3 Tax=Rhodothermaceae RepID=Q2S2L2_SALRD Length = 665 Score = 388 bits (998), Expect = e-106, Method: Composition-based stats. Identities = 148/670 (22%), Positives = 263/670 (39%), Gaps = 69/670 (10%) Query: 14 YLFASLASLFLLGLDRLAIKLSGITSLVGGV-IGIISGITQLHAGVTLVARFAPPFEFAD 72 + +A LFL L + + + V + + + G +VA + D Sbjct: 18 AVLNGVAPLFLKHLRTRETLVGTVGTAVVAIPFVLTVYLFVTFGGDPIVADYFTWMAAGD 77 Query: 73 ----LTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVAL 128 R+D LS M V++ + V LYS+ YM + G ++N+FI +M+ L Sbjct: 78 LDLSFAYRIDQLSLLMTGVVTGVGGVIHLYSIGYM--HGDAGYWRFFAYLNLFIFAMLNL 135 Query: 129 LVMDNAFWFIVLFEMMSLSSWFLVIARQDK-TSINAGMLYFFIAHAGSVLIMIAFLLMGR 187 ++ +N + +E + L S+ L+ ++ A F + G ++A L+ + Sbjct: 136 VLANNLPVLFLGWEGVGLCSYLLIGFWYTDLSNSAAANKAFIVNRVGDFAFLVAMFLVFQ 195 Query: 188 ESGSLDFASFRTLS--LSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASAL 245 + GSL F T L + + L F G K+ +PL WLP A A P+ SAL Sbjct: 196 QLGSLSFDVLLTEGPNLPEATLNWIVFLLFVGATGKSAQIPLFVWLPDAM-AGPTPVSAL 254 Query: 246 -MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLL 304 + MV G++ + +++ +L +++ +GA +AL+ A+A+ DIKR+L Sbjct: 255 IHAATMVTSGLYLLARLSALVLGA----PVVMMIIAIVGAATALMAATIAIAQDDIKRVL 310 Query: 305 AWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIIS 364 A+STV +G + +A GV ++FH++ HA FK LFLG+G++I Sbjct: 311 AYSTVSQLGYMFMAAGVG--------------AFFVSIFHVITHAFFKACLFLGSGSVIH 356 Query: 365 RLHT-----------------HDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISE 407 + DM MG + + MP T L+ LAIS IP GF S+ Sbjct: 357 GMEEVEHGLEEQGRDTSDFDPQDMRTMGGVGEYMPATRTTYLLATLAISGIPLTAGFFSK 416 Query: 408 WYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEE- 466 F + ++ VT L ++ Y +TF G PR ++ Sbjct: 417 DEILFKAFEYGYDGSTYAMA----VWIVGVVTAVLTAFYMMRSYMLTFEGEPRWPLPDQL 472 Query: 467 -AQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTF 525 E P+TM + L L ++ + + A +A Sbjct: 473 SPHESPSTMTGPLWTLGILSLVGGFIGLPAV-IQGGDLNWIHHYLGAKYGGPVAEASVHG 531 Query: 526 HTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQ 585 H + L+LL ++ L +Y+ W G ++ A+ GV Q Sbjct: 532 HVPLALEWGLILLSSVIALGTVYYAWRVYGTQ-----------GLEYDAALQRQLRGVYQ 580 Query: 586 PLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQ 645 +S + + D + + + + + + + A Q + ++ Sbjct: 581 ----TWSDKYYWDEFYDEVVVDSLINGIARKGLAAFDTTVVDGAVNGVAGAAQNASGLLR 636 Query: 646 HLQSGDFRLY 655 +Q+G + Y Sbjct: 637 RVQTGLVQNY 646 >UniRef50_A1RWL8 NADH dehydrogenase (Quinone) n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RWL8_THEPD Length = 737 Score = 388 bits (998), Expect = e-106, Method: Composition-based stats. Identities = 212/659 (32%), Positives = 347/659 (52%), Gaps = 18/659 (2%) Query: 6 LLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFA 65 L S+ LY+ + + SL L + I+L+ + + ++ ++ + L + V Sbjct: 8 LFLGSIALYVVSIVLSLILRSKPKENIRLTYALTALASLLLMLYSLDALLSPGAPVIVEG 67 Query: 66 PPFEFAD--------LTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMG-F 116 L +D LSAF++LVIS + + S++S+ Y Y G+ + + F Sbjct: 68 IRVPGLQDQFGAHGFFALYVDKLSAFLLLVISFVALYSSIFSIGYSEMYAGEYSISYLTF 127 Query: 117 FMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIA-RQDKTSINAGMLYFFIAHAGS 175 F +F+ SMV ++ ++A F + +E+M+LSS+ LV + + S +A YF IAHAG Sbjct: 128 FYALFVLSMVLVVTANDALSFYLSWELMTLSSYMLVGYEHRSEESRDAAKTYFIIAHAGG 187 Query: 176 VLIMIAFLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAH 235 I++++ L+ GSL F +FR + PG+AS +FLLA GFG+KAG++PLH+WLP+AH Sbjct: 188 ACILLSYALLYFIKGSLSFDAFREGGVPPGIASLIFLLALVGFGSKAGIVPLHAWLPQAH 247 Query: 236 PAAPSHASALMSGVMVKIGIFGILKVAMDLL-AQTGLPLWWGILVMAIGAISALLGVLYA 294 PAAPS+ SAL+SGVM+K+ ++G+++V D L WG VM I A S ++GV +A Sbjct: 248 PAAPSNVSALLSGVMLKVAVYGLIRVVFDFLKPSGVEGGLWGCAVMIIAAFSTIIGVQFA 307 Query: 295 LAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGL 354 + + D+KRLLA+ ++EN+GIILL VG +++ S + + L AL+HLLNHA+FK L Sbjct: 308 VVQHDLKRLLAYHSIENIGIILLGVGASLILYSEGLKDVAALALTAALYHLLNHAVFKSL 367 Query: 355 LFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSL 414 LFLG+G+++ T + E +G L+K +PWT+ LI +AI+ +PPLNGF SEW T+QSL Sbjct: 368 LFLGSGSVLKSCRTRNFELLGGLSKYLPWTSVTFLIAAMAIAGVPPLNGFASEWLTYQSL 427 Query: 415 FSL---SRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVP 471 ++ + +A + LA + +ML + G LAV+CF K+YG+TF G + + Sbjct: 428 LAVVKEAAGKAPWVSLAALFSALMLGLAGALAVLCFTKVYGVTFLGPLGRVKPKGGE--S 485 Query: 472 NTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTP 531 TM + M + AA C+++ ++ ++A + + T P A + + Sbjct: 486 LTMKIGMAIPAAACIVLGVAMPYVAVFVDKASRQITGAPAPLAAPSPLSLVLESNLLRGE 545 Query: 532 SLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWEN-AMAPSGNGVMQPLRVV 590 L L A+ +L L RR RT W G +E AM P+ +R + Sbjct: 546 VSLPGLAAALVILVAAAGLALGLRRLKITRT-PPWVSGVEYEPEAMKPTATAYASQVRGL 604 Query: 591 FSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQS 649 F+ L+ + + + + P + + + L + Sbjct: 605 FARLYGVTVKEHREYSVPPIYTRKLSYEVEMRPKIEAYAYVKVEGPPTTTQGTLARLAT 663 >UniRef50_C7R7H2 Proton-translocating NADH-quinone oxidoreductase, chain L n=4 Tax=Gammaproteobacteria RepID=C7R7H2_KANKD Length = 672 Score = 388 bits (998), Expect = e-106, Method: Composition-based stats. Identities = 133/700 (19%), Positives = 254/700 (36%), Gaps = 90/700 (12%) Query: 1 MDALQLLTWSLILYLFASLASLFLLGL--DRLAIKLSGITSLVGGVIGI-----ISGITQ 53 M L ++ L ++ + L RL +L+ I ++ ++ + Sbjct: 1 MSMQTQLLLIVLAPLIGAMLAGLLGKRLGRRLTHRLTIIGVVISFILSLRIFWGFLYGDA 60 Query: 54 LHAGVTLVARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAA 113 +T+ + + +DSLSA M++V++ + ++ +YS+ YM ++ G Sbjct: 61 TPVDMTVYHWASFSDLTIQIGFMIDSLSALMMVVVTFVSLMVHIYSIGYM--HDDDGYQR 118 Query: 114 MGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKT-SINAGMLYFFIAH 172 ++++F SM+ L++ +N +E + L S+ L+ K +I A M F + Sbjct: 119 FFSYLSLFTFSMLMLVMANNFLQLFFGWEAVGLVSYLLIGFWYQKESAIFANMKAFLVNR 178 Query: 173 AGSVLIMIAFLLMGRESGSLDFASF--------------------------------RTL 200 G ++ + G+ D+A Sbjct: 179 VGDFGFILGIGAIFLLFGTFDYAPIFKSMGQAEEIMQISERSAENALGLMSLDGSFVAWG 238 Query: 201 SLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGIL 259 S + + + + F G K+ +PLH WLP + P+ SAL + MV G+F + Sbjct: 239 DTSWPIITFICICLFIGAMGKSAQVPLHVWLPDSM-EGPTPISALIHAATMVTAGVFMVA 297 Query: 260 KVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAV 319 +++ +V IGAI+AL L A+ + DIKR++A+ST+ +G +++A+ Sbjct: 298 RMSPLF----EFSETALTMVTIIGAITALFMGLVAIVQNDIKRIIAYSTLSQLGYMVVAL 353 Query: 320 GVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRL-HTHDMEKMGALA 378 GV+ A+FHL HA FK LLFLGAG++I L H ++ KMG L Sbjct: 354 GVS--------------AYSAAIFHLFTHAFFKALLFLGAGSVIVALHHEQNIRKMGGLY 399 Query: 379 KRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAV 438 KR+P T L+G LA+ P GF S+ + A A + Sbjct: 400 KRLPLTYWTTLVGTLALIGTPFFAGFYSKDAIIMAASEAQGPAAS-------FAYFAVMA 452 Query: 439 TGGLAVMCFVKMYGITFCGAP--RSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLA 496 + + ++M + F G H + E P + ++ LA ++I + Sbjct: 453 GVVVTALYSMRMLLVVFHGKSSLDEQHLNQLTESPRVITWPLIALAVPSLIIGWFMTKPM 512 Query: 497 PKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRR 556 + A + + + + M ++ + Sbjct: 513 LDGDYFAESLMVLTSHDTMQAFRDEFAGAMSFAVHGFMTPVFWLMLAGVMTAVIFVWLK- 571 Query: 557 AAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTA 616 W + ++ P+ + + + Sbjct: 572 -------PGWGA----------AAGKMLSPVNRLLQRKYYFDEVYQKVFAKGSYSLGDML 614 Query: 617 RAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYC 656 + D+ ++ R+ + ++ LQSG Y Sbjct: 615 WQYGDKAVIDDGIVNSGAQTLGRIGQALRKLQSGYLYHYA 654 >UniRef50_Q28T51 Proton-translocating NADH-quinone oxidoreductase chain L n=270 Tax=cellular organisms RepID=Q28T51_JANSC Length = 711 Score = 388 bits (996), Expect = e-106, Method: Composition-based stats. Identities = 147/732 (20%), Positives = 246/732 (33%), Gaps = 93/732 (12%) Query: 8 TWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAPP 67 T L L +L F L T + + + G T Sbjct: 3 TILLFAPLVGALICGFSWRLIGEQAACVIATGFLFLSCLLSWVVFIGFEGETYTRSLFTW 62 Query: 68 F----EFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYE-----GKGAAAMGFFM 118 F D +R+D L+A M++VI+ + + LYS YM E ++ Sbjct: 63 IESGTLFTDWAIRVDRLTAIMLIVITSVSALVHLYSFGYMAHDENFKEGESYRPRFFAYL 122 Query: 119 NIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSI-NAGMLYFFIAHAGSVL 177 + F +M+ L+ DN +E + ++S+ L+ K S A M F + G Sbjct: 123 SFFTFTMLMLVTADNLLQLFFGWEGVGVASYLLIGFYFRKPSAGAAAMKAFIVNRVGDFG 182 Query: 178 IMIAFLLMGRESGSLDFASFRTLSLSPGLASAVFL------------LAFFGFGAKAGMM 225 ++ + + S+ F + S +FL L F G K+ + Sbjct: 183 FLLGIFALFWMTDSIQFDVVLGMGAELAEMSIIFLGMELNAAETIAFLLFIGAMGKSAQL 242 Query: 226 PLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGA 284 LH WLP A P+ SAL + MV G+F + +++ + G ++ IGA Sbjct: 243 LLHVWLPDAM-EGPTPVSALIHAATMVTAGVFLVCRMSPVI----EYAPLAGNFIIIIGA 297 Query: 285 ISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFH 344 +SA + L + DIKR++A+ST+ +G + +A GV + + A+FH Sbjct: 298 LSAFVAATIGLVQNDIKRVIAYSTMSQLGYMFVAAGVGVYSV--------------AMFH 343 Query: 345 LLNHALFKGLLFLGAGAIISRL-HTHDMEKMGALAKRMPWTAAACLIGCLAI--SAIP-- 399 LL HA FK +LFLGAG++I + H DM G L K++P+T A +IG LAI IP Sbjct: 344 LLTHAFFKAMLFLGAGSVIHAMHHEQDMRNYGGLRKKIPYTFWAMMIGTLAITGVGIPLL 403 Query: 400 ------PLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGI 453 GF+S+ +S ++ G A L + ++ + Sbjct: 404 YVGFPVGFAGFVSKDAVIESAYAFGGD-------LGQFAFWALVIGALFTSFYSWRLMFL 456 Query: 454 TFCGAPRSTH--AEEAQEVPNTMIVAMLLLAALCVLIAL---------------SASWLA 496 TF G R E A E P TM++ + LA V+ + Sbjct: 457 TFYGEARGNKHTHEHAHESPMTMLIPLGALAIGAVVAGMVWYGSFFGKTNYVAQFFGVPY 516 Query: 497 PKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRR 556 + A G + G + Sbjct: 517 AVEEAHGDEHADDHSGEDAHGAEEQAEDHAAGGGHGDDPHYVFTGAPGEGAIHHAPDNHV 576 Query: 557 AAFRRTGDAW----------------ACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQ 600 + W Y + ++ +PL + + Sbjct: 577 LNDAHSVPNWVKVAPFVAMVLGFATAYLFYILKPSIPGRLATQQKPLYNFLLNKWYFDEA 636 Query: 601 LDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVV 660 + + D + + + QSG Y +V Sbjct: 637 YEYLFIKPAQWLGRFLWKRGDTNTIDGSINGLAMGIIPFFTRLAGRAQSGYIFHYAFAMV 696 Query: 661 AALVVLLIAIAV 672 LV ++I + + Sbjct: 697 LGLVAIIIFVTL 708 >UniRef50_A6Q6W0 Ni-Fe hydrogenase, membrane subunit HycC/HyfB n=4 Tax=Bacteria RepID=A6Q6W0_SULNB Length = 627 Score = 388 bits (996), Expect = e-106, Method: Composition-based stats. Identities = 197/600 (32%), Positives = 317/600 (52%), Gaps = 6/600 (1%) Query: 75 LRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNA 134 + D+LS V +I L + YS Y+ E FI SM+ ++V NA Sbjct: 2 FQFDTLSVIFVALILLGAIPNLFYSHGYLPHIE--RKIHYQLHYFAFILSMLGVVVSANA 59 Query: 135 FWFIVLFEMMSLSSWFLVIAR-QDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLD 193 F++ +E+MSL+SW L++ ++K +I A YF + H G V +++ FL++ + Sbjct: 60 LVFLLFWELMSLTSWQLILTEAKEKKTIEAAKFYFIMTHFGFVFLLLFFLIVTDGDLEIG 119 Query: 194 FASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKI 253 FA+ ++ + + +F GF +KAG +PLH WLP AHP APS SALMSGVM+K+ Sbjct: 120 FAAMHGIASAFAYPTLLFFFLILGFLSKAGAVPLHVWLPYAHPEAPSPVSALMSGVMLKV 179 Query: 254 GIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVG 313 I+G+ + D+L PL WGI+++ IGA+S+L+GVLYAL+E DIK LLA ++EN+G Sbjct: 180 AIYGMFRFLFDVL--YPWPLEWGIVILVIGALSSLVGVLYALSEHDIKALLANHSIENIG 237 Query: 314 IILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEK 373 IIL+ G+ M+ S+H +L+ + ALFH NH FK LLF+GAG+++ + HT ++EK Sbjct: 238 IILMGFGMGMIFDSMHLKVLSSFAFIAALFHTFNHMSFKSLLFMGAGSVLHQTHTKNIEK 297 Query: 374 MGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAM 433 G L K MP TA L+ ++ISA+PP NGF+SEW +QS+ S + ++L+LA P A+ Sbjct: 298 YGGLIKSMPITALTFLLASISISALPPTNGFLSEWMIFQSMLGSSHLGNMSLKLAIPFAI 357 Query: 434 VMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSAS 493 LA+TGGLA+ CFVK YGITF G RST+A+ A EV M ++L+A + + + L Sbjct: 358 FALAMTGGLAIACFVKAYGITFLGLHRSTNAKHAHEVNFLMRSGLILMALVVISLMLFTP 417 Query: 494 WLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCR 553 + A + ++ + + L+LLA + ++ Sbjct: 418 FYIAWFDKGLVALGHLSVYDKIFPERVLHMHSVSMHGGVVSPLILLAALIGVTALLMFAY 477 Query: 554 SRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQL-DPTLRLNKGLA 612 R W CGY + G P+R F+ L++ + TL ++ Sbjct: 478 KTLKVKERVHHTWGCGYRTSAKTQYTATGFAGPIRRFFNWLYKPEEHFCKETLAGHESKF 537 Query: 613 HVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLIAIAV 672 + +P ++ + + A ++ + L + Y + ++++L + + Sbjct: 538 SSSHYEVHVKPLFETSLYNSVSKAANAISYWVYRLSHFEQTRYAAMIFNLMLMVLFSYRI 597 >UniRef50_Q1AVJ0 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AVJ0_RUBXD Length = 656 Score = 387 bits (995), Expect = e-106, Method: Composition-based stats. Identities = 156/678 (23%), Positives = 266/678 (39%), Gaps = 64/678 (9%) Query: 4 LQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVAR 63 L + +I + + +LF L A ++ + V + + G L Sbjct: 8 LVIAAIPVIPLVVFFVLALFGRLLRENAQYVAIFGMVFSVVFSFFALYLVIRDGRPLEFS 67 Query: 64 FAP----PFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMN 119 + + +D L+A M++V+S + ++ LYS +M + A +N Sbjct: 68 VYWINLGEGGGFPIGVYIDELAAVMLVVVSFVSLMIQLYSGGFMAGD--RRFAWYYAVLN 125 Query: 120 IFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSIN-AGMLYFFIAHAGSVLI 178 +F ASM+ L+V N + +E++ L S+ L+ +K + A + F + G + Sbjct: 126 LFTASMLGLVVAPNFIELYICWELVGLCSYLLIGHWFEKPAARDAALKAFIVTRIGDAAL 185 Query: 179 MIAFLLMGRESGSLDFASFRTLS----LSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRA 234 + ++ R +G+ F + + L +A +L F G K+ PLH WLP A Sbjct: 186 FVGIIMFWRATGTTAFEGIAEAAQAGFIGGSLLTAAVVLVFVGAIGKSAQFPLHVWLPDA 245 Query: 235 HPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLY 293 P+ SAL + MV G++ + + + L +V IGA +A + Sbjct: 246 M-EGPTPVSALIHAATMVAAGVYLVARTYDIFVQSPTAML----IVAYIGAFTAFMAATM 300 Query: 294 ALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKG 353 AL ++DIKR++A+STV +G ++L +GV +FHL NHA FK Sbjct: 301 ALVKKDIKRVIAYSTVSQLGYMMLGLGVG--------------AFSAGMFHLYNHAFFKA 346 Query: 354 LLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQS 413 LLFL AG+II + ++++ +MG L +RMP T +I L+++ I PL GF S+ S Sbjct: 347 LLFLCAGSIIHAMDSYNLFEMGGLRRRMPLTFWTMVIAGLSLAGIFPLAGFWSKDAIIAS 406 Query: 414 LFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNT 473 F + + T L + + F G PR+ A A E P Sbjct: 407 AFEEHY----------YVLYALAIGTVFLTAFYIFRAIFLAFTGEPRTEGAARAVESPGV 456 Query: 474 MIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSL 533 M V M++LA L V + +V P Sbjct: 457 MTVPMVILAVLSVASG--------WVGIPEGFGLPVRDYFGGFVAPSGFARETLEVEPHG 508 Query: 534 LLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSA 593 LL A+ +L GL + Y A+AP+ + L Sbjct: 509 FSFLLAAISVLVGLAGIGLAY-------------AMYVARPALAPAMARRLFGLHTFLDK 555 Query: 594 LFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFR 653 + T Q + ++ I T RL + ++ +Q+G + Sbjct: 556 GWYFDALYGATFVRAAFAVGRAV--QGFDREVLGGLVGGIARGTGRLGEALRRVQTGRVQ 613 Query: 654 LYCLYVVAALVVLLIAIA 671 Y L++V +++VL I Sbjct: 614 NYALFIVVSVLVLAIVAG 631 >UniRef50_Q49W91 Na(+)/H(+) antiporter subunit A1 n=19 Tax=Bacillales RepID=MNHA1_STAS1 Length = 805 Score = 386 bits (993), Expect = e-105, Method: Composition-based stats. Identities = 143/678 (21%), Positives = 274/678 (40%), Gaps = 26/678 (3%) Query: 4 LQLLTWSLILYLFASLASLFLLGL-DRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVA 62 + LL +++L L +L F+ R+ + + V I +S I+ +G T++ Sbjct: 1 MSLLHIAVLLPLIFALIIPFVYRFYKRIHLGWFVLPIPVVLFIYFLSYISTTMSGNTIME 60 Query: 63 RFAP-PFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIF 121 + P + L +D L L+I+ + + LYS++Y+ E G ++ +F Sbjct: 61 KANWMPHFGMNFNLYVDGLGLLFSLLITGIGCLIVLYSISYLSRQEQLGH--FYCYLLLF 118 Query: 122 IASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTS-INAGMLYFFIAHAGSVLIMI 180 + +M+ L++ DN + +E+ S SS+ L+ +DK + I + G + ++ Sbjct: 119 MGAMLGLVLSDNLIILYLFWELTSFSSFLLISFWRDKQASIYGAQKSMLVTVFGGLSLLG 178 Query: 181 AFLLMGRESGSLDFASF---RTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPA 237 +L+ G+ + + +L G K+ P + WLP A Sbjct: 179 GIILLSIAGGTTSIQELINNASEIQTSPFFIFSMILVLIGAMTKSAQFPFYVWLPDAM-E 237 Query: 238 APSHASA-LMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALA 296 AP+ SA L S MVK G++ + ++ + W V A+G I+ L A Sbjct: 238 APTPVSAYLHSATMVKAGLYLVARMTPIF----AVSQGWIWTVTAVGLITLFWASLNATK 293 Query: 297 EQDIKRLLAWSTVENVGIILLAVGVAMVGLS--LHDPLLTVVGLLGALFHLLNHALFKGL 354 +QD+K +LA+STV +G+I+ +GV V + + + A+FHL+NHA FKG Sbjct: 294 QQDLKGILAFSTVSQLGMIMAMLGVGAVSFHFEGAESQIYIAAFTAAIFHLINHATFKGA 353 Query: 355 LFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSL 414 LF+ GA+ T D++K+G L MP + LI L+++ IPP NGF+S+ +S+ Sbjct: 354 LFMITGAVDHSTGTRDVKKLGGLLTIMPISFTITLITSLSMAGIPPFNGFLSKEKFLESM 413 Query: 415 FSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTH-AEEAQEVPNT 473 ++ V +L G + + + + ++ G F G+ + ++A EV Sbjct: 414 IEVTNVNLFSLDTLGILIPITAIIGSVFTFVYSIRFIGQIFLGSYKEDKLPKKAHEVSPL 473 Query: 474 MIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSL 533 M+++ +LA L ++ L + L+ I+ A N T S T S Sbjct: 474 MLISPSILAILVIVFGLFPAILSGSIIEPA---VNAIGQTTNSTAEFHMFHGFTPAFFST 530 Query: 534 LLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYG------WENAMAPSGNGVMQPL 587 L + ++ + L+ + ++ + T + W +G G + Sbjct: 531 LGIYIVGIVLIITFSYWIYLLQKQPTKLTINYWYNKFGDVTPRYSSKFTDTYVTGFTRNN 590 Query: 588 RVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHL 647 V+ A + + + + + E +I ++ + Sbjct: 591 LVIIFASLIVIALVTLLVTPFNIDFKDVSAIRPFELIIVVLIITAASMIIFAKSRLFSII 650 Query: 648 QSGDFRLYCLYVVAALVV 665 + Sbjct: 651 MASAVGYSVAIFFIFFGA 668 >UniRef50_B9DJY9 Putative NADH dehydrogenase I chain L n=1 Tax=Staphylococcus carnosus subsp. carnosus TM300 RepID=B9DJY9_STACT Length = 824 Score = 386 bits (993), Expect = e-105, Method: Composition-based stats. Identities = 126/561 (22%), Positives = 236/561 (42%), Gaps = 15/561 (2%) Query: 24 LLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAPPFEFADLTLRMDSLSAF 83 + R + ++ I ++ + + + +T V+ P D R+D LS Sbjct: 48 IKPFARFSGWIALIAPILSALYFVFKISQTADSKITSVSLPWMPIIDLDFAFRLDGLSMI 107 Query: 84 MVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEM 143 L+I+L+ LY+ Y+ + F++ +F+ +M+ +++ DN V +E+ Sbjct: 108 FALLITLIGTGVVLYANAYLSKE-HDDLPRFYFYLILFMFAMLGVVLADNTILLYVFWEL 166 Query: 144 MSLSSWFLVIARQDKTSIN-AGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASF---RT 199 S++S+ L+ ++ + + F I G + ++I F+++ SG+ + Sbjct: 167 TSIASFLLISYWYNRKASQNGALKSFLITVFGGMFMLIGFIIIYSISGTNTISELVTQTD 226 Query: 200 LSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASA-LMSGVMVKIGIFGI 258 S + G K+ P H WLP A AP+ SA L S MVK G++ + Sbjct: 227 TLRSSPWFPFAVVCILIGAFTKSAQFPFHIWLPDAM-EAPTPVSAYLHSATMVKAGLYLL 285 Query: 259 LKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIIL-- 316 + L W G +V+ +G I+ +G A+ ++D+K LLA+ST+ +G+I+ Sbjct: 286 FRFTPIL----SYASWVGYIVITVGIITLAVGSFVAVGQRDLKALLAYSTISQLGMIMSM 341 Query: 317 LAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGA 376 + G+ L V+ L LFHL+NHALFK +LF+GAG I T ++ +G Sbjct: 342 VGFGMLTYSLHKSFVEFFVISLFAGLFHLINHALFKSVLFMGAGIIDHETGTRNLADLGG 401 Query: 377 LAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVML 436 L K +P TA I +A++ +P NGF+S+ + +L + R + Q+ I +++ Sbjct: 402 LRKLLPVTATIMTISAMAMAGLPFFNGFLSKEMFFTTLVN-GRKLPIDDQIFMSIMLIIA 460 Query: 437 AVTGGLAVMCFVKMYGITFCGAPRSTHAEE-AQEVPNTMIVAMLLLAALCVLIALSASWL 495 L + ++M TF G P M +A +++ L + + L Sbjct: 461 IGASVLTFVYSLRMIKDTFFGPLNKEKLPHVPGHEPIGMYIAPVIIVCGLPLFFIIPNIL 520 Query: 496 APKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSR 555 ++ A N + T L++ + + LL W+ +R Sbjct: 521 GKYLISPALRDINHTVVVEKYIPHITAWHGFTSELGITLIIYTIGILLLWRSRWMKVYNR 580 Query: 556 RAAFRRTGDAWACGYGWENAM 576 + + W Sbjct: 581 IPSILSINSLYNAMLKWSEGF 601 >UniRef50_Q02CT3 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q02CT3_SOLUE Length = 624 Score = 386 bits (991), Expect = e-105, Method: Composition-based stats. Identities = 145/687 (21%), Positives = 259/687 (37%), Gaps = 93/687 (13%) Query: 8 TWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHA----------- 56 W + ++ A L G + + L ++ V+ + + + A Sbjct: 3 LWLIPIFPLAGFLINGLFGR-KFSKSLVSTVAVGSVVLSFLWVLKTISAMGDLNTPHLEH 61 Query: 57 ---GVTLVARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGK---G 110 + +P F +D L+ M+LV++ + + +YS+ YM G G Sbjct: 62 YFTWIQSGFPGSPNFVNIGCDFLVDRLTIVMLLVVTGIGSLIHIYSIGYMAHEHGPNFGG 121 Query: 111 AAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKT-SINAGMLYFF 169 ++N+F+ M+ L++ N V +E + L S+ L+ DK + NAG F Sbjct: 122 FYRFFAYLNLFMFFMLVLVLGANYLLLFVGWEGVGLCSYLLIGFYFDKKFATNAGNKAFI 181 Query: 170 IAHAGSVLIMIAFLLMGRESGSLDFASFRTLSLSP--GLASAVFLLAFFGFGAKAGMMPL 227 + G +A L+ GSLDFA + + + LL G K+ +PL Sbjct: 182 VNRIGDFGFSLAMFLIFHHFGSLDFAEVFHKAPGGTEATLTTICLLLLVGACGKSAQIPL 241 Query: 228 HSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAIS 286 + WLP A A P+ SAL + MV G++ + + G ++ IG + Sbjct: 242 YVWLPDAM-AGPTPVSALIHAATMVTAGVYMTARSWVLFTHAPGAMD----VMAIIGIAT 296 Query: 287 ALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLL 346 A + LA+ DIK++ A+STV +G + + VG ++HL+ Sbjct: 297 AFMAATIGLAQNDIKKVFAYSTVSQLGYMFVGVGSG--------------AFSAGVWHLV 342 Query: 347 NHALFKGLLFLGAGAIISRL-HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFI 405 HA FK LLFLGAG++I L DM MG L K++P T +AIS IPP +GF Sbjct: 343 THAFFKALLFLGAGSVIHSLSGEQDMRNMGGLRKKIPITFWTMACAWVAISGIPPFSGFF 402 Query: 406 SEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAE 465 S+ + + S + +T L + +TF G R Sbjct: 403 SKDAILVAAYQHSHA-----------IYWIGVITAELTAFYVSRAMFMTFFGEYRGK--A 449 Query: 466 EAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTF 525 E P M + +LA L ++ + + + + + Sbjct: 450 HPHESPAVMWAPLAVLAVLSLIGGMVFN--------------------IPEFLKAMFPAM 489 Query: 526 HTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQ 585 P L+ + + L L WL + +A S + + Sbjct: 490 EEVDNPMLMYISIAFGFLGIALAWLMYVVK------------------PGLADSLANMFK 531 Query: 586 PLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQ 645 + + + + D T+ + + + ++ + + ++ + ++ Sbjct: 532 APYQLIYNKYFVDEIYDATVVKPVVAGSRVVLWKGVDAGLIDGIVNGVGARSRDVGSVLR 591 Query: 646 HLQSGDFRLYCLYVVAALVVLLIAIAV 672 LQSG R Y +V+ V L++AI + Sbjct: 592 LLQSGSIRSYATWVLFGSVALIVAITL 618 >UniRef50_A9B6Y2 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B6Y2_HERA2 Length = 683 Score = 385 bits (990), Expect = e-105, Method: Composition-based stats. Identities = 136/668 (20%), Positives = 241/668 (36%), Gaps = 84/668 (12%) Query: 30 LAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAPPFEFADLTLRMDSLSAFMVLVIS 89 + ++ + L+G G VT A +D LS M+L+++ Sbjct: 74 FVLTVATLIELLGMPAKTTLGENNRWFDVTYWNWMAFGDLEVPFGFLIDQLSVTMMLLVT 133 Query: 90 LLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSW 149 + + LY++ YM E ++N+FI +M+ L++ +N + +E + L S+ Sbjct: 134 GVGTLIHLYAVGYMSHDE--RPTRFFVYLNLFIVAMLMLVMGNNFVMLFLGWEGVGLCSF 191 Query: 150 FLVIARQD-KTSINAGMLYFFIAHAGSVLIMIAFLLMGRES--------GSLDFASFRT- 199 L+ + + A + F G +++A + + SL F Sbjct: 192 LLIGFWFEQRDPPWASVKAFVTNRVGDFGLLMAMFAIWALARKPDGTFLHSLVFREVLEQ 251 Query: 200 -------------LSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASAL- 245 + A A+ + G K+ +PL WLP A A P+ SAL Sbjct: 252 GTVFSLQQYSTFFMGTQYTAAGAIAFMLLLGVTGKSAQIPLFVWLPDAM-AGPTPVSALI 310 Query: 246 MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLA 305 + MV G++ +++ L V IG +AL+ AL + DIK++LA Sbjct: 311 HAATMVTAGVYLMIRTHPIF----ELSPAVQSSVTFIGVATALVAASIALGQYDIKKVLA 366 Query: 306 WSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISR 365 +STV +G ++ AVG+ + A+FHLL H +FK LLFLG+G++I Sbjct: 367 FSTVSQLGFMVAAVGMG--------------AYVAAMFHLLTHGIFKALLFLGSGSVIHG 412 Query: 366 LH-THDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVA 424 DM KMG L K+MP T ++G + + P ++GF S+ F Sbjct: 413 FGNEQDMRKMGGLRKKMPVTFWTYIVGTMGLIGFPLVSGFWSKDEIIGHAFDHDHRT--- 469 Query: 425 LQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAAL 484 ++L + L + + F G R H A E M + + +LA L Sbjct: 470 -------VGMLLILGAVLTSFYMGRQISMVFFGEQRDQHI-HAHESSRWMTIPLAILAVL 521 Query: 485 CVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLL 544 + L + + A FH + + +L L + Sbjct: 522 TLASGLINIVVLHPLTTWLEPIVEEEAAK-----------FHLNIAAIVTILGLASFAAG 570 Query: 545 PGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPT 604 LY + +R + G + + + Sbjct: 571 FYLYNWAAKHKRIKPNQRDLLHHWG---------------GDFYAILEEKWGFDALYNAV 615 Query: 605 LRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALV 664 L A + + + + ++ + ++ QSG R Y L V +V Sbjct: 616 LV-KPYKALASFFGKFFDVKIIDGIVNGTAELVGLSGRGLRTFQSGYVRSYALMFVIGVV 674 Query: 665 VLLIAIAV 672 ++L A+ Sbjct: 675 IVLGFFAL 682 >UniRef50_A1ZLY6 NAD(P)H-quinone oxidoreductase chain 5 (NAD(P)Hdehydrogenase I, chain 5) n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZLY6_9SPHI Length = 702 Score = 385 bits (989), Expect = e-105, Method: Composition-based stats. Identities = 139/727 (19%), Positives = 268/727 (36%), Gaps = 83/727 (11%) Query: 3 ALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTL-- 60 L L+L L L + L+ + I Q+ G L Sbjct: 1 MTYLTLLILLLPFINFLVLLTGQKKIKRGGGHFATAVLLVTTVLAIVTAWQVLGGQPLYI 60 Query: 61 -VARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMN 119 + F+ + L +D+LSA M++V++L+ + ++SL YM+ K ++ Sbjct: 61 DIYWFSLGTRSFKVDLYIDNLSALMMIVVTLVSALVHMFSLEYMK--TDKNYNRYFAYLG 118 Query: 120 IFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKT-SINAGMLYFFIAHAGSVLI 178 +F SM+ +++ N + +E++ +SS+ L+ +K + A F + G V Sbjct: 119 LFTFSMLGIIIFHNLLIIYIFWELVGVSSYLLIGFWYEKKSATRASQKAFLVNRIGDVGF 178 Query: 179 MIAFLLMGRESGSLDFASFRT----LSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRA 234 + LL+ G + S SLS G+ + L F G K+ PL WLP A Sbjct: 179 LAGILLVFNYFGDFNLLSIAQSPQFASLSVGVLLIIGLCLFCGAVGKSAQFPLQVWLPDA 238 Query: 235 HPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLY 293 P+ SAL + MV G++ + ++ L L ++ IG I+A +G Sbjct: 239 M-EGPTPVSALIHAATMVAAGVYLLARIFFLL------NLEALSVIATIGCITAFIGAFS 291 Query: 294 ALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKG 353 ALA+ DIK++LA+ST+ +G +++ +GV +L HLL HA FK Sbjct: 292 ALAQSDIKKVLAYSTISQLGYMVMGMGVG--------------AYEASLLHLLTHAFFKA 337 Query: 354 LLFLGAGAIISRLH-----------THDMEKMGALAKRMPWTAAACLIGCLAISAIPPLN 402 LFL AGA+I +H +M MG L K MP+T ++ A++ +P + Sbjct: 338 CLFLCAGAVIHSMHQLEHKLNIHFDAQNMYLMGGLRKAMPFTFMCYVLSAAALAGLPFFS 397 Query: 403 GFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCG----- 457 GF+S+ + + + + P+ ++ L + + F G Sbjct: 398 GFLSKDAILSGSLAWASFKGGGVWYLLPLFGF---LSAFLTAFYMGRQLFLVFFGHLELE 454 Query: 458 ---APRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTP-PAT 513 + ++VP M + + +LA + + +S + + + Sbjct: 455 KVFEEAKGALAKVKDVPLQMKIPLGVLALGALWLMVSLNPFDAESGALWQWLVPANKSKV 514 Query: 514 VASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWE 573 +A + T V + + ++ L GL + R + + Sbjct: 515 IADSVFTELATSSHHVHGFTIAVSVILAFLGLGLAYALYRKHKVHPEYALLGTPALFHLS 574 Query: 574 NAMAP--------------------------SGNGVMQPLRVVFSALFRLRQQLDPTLRL 607 + + + R +++ + Sbjct: 575 HHSLYIDKLYKNTVARFSLRLSHKSFAVDDLYDQVFTNGIVKFSGTVARWDKKVVDGVVN 634 Query: 608 N--KGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVV 665 K + + + + + + + + Q+G + Y L+VV +L+ Sbjct: 635 FVAKFYVVLAHIIAWIDKAIVDGFVHLLAYLAKFTGRISRSFQNGHIQSYYLWVVISLIA 694 Query: 666 LLIAIAV 672 L++ + V Sbjct: 695 LVLFLVV 701 >UniRef50_B3PW10 NADH-ubiquinone oxidoreductase protein, chain L n=51 Tax=cellular organisms RepID=B3PW10_RHIE6 Length = 666 Score = 384 bits (988), Expect = e-105, Method: Composition-based stats. Identities = 131/713 (18%), Positives = 248/713 (34%), Gaps = 95/713 (13%) Query: 4 LQLLTWSLILYLFASLASLFLLGL--DRLAIKLSGITSLVGGVIGIISGITQLHAG---- 57 + L + L L ++ + + + ++ ++ ++ T Sbjct: 1 MFLYKAIVFLPLIGAIVAGLFGRAIGAKASEYVTSGLMIIAAILSWYVFFTVGMGHAEGG 60 Query: 58 ---VTLVARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAM 114 V ++ +LR+D+L++ M++V++ + ++ +YS+ YM + Sbjct: 61 PIKVEVLRWIQSGGIDVSWSLRVDTLTSVMLVVVNTVSMLVHVYSIGYMHTDPHR--PRF 118 Query: 115 GFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKT-SINAGMLYFFIAHA 173 ++++F +M+ L+ DN +E + L+S+ L+ K + A M F + Sbjct: 119 FAYLSLFTFAMLMLVTADNLAQMFFGWEGVGLASYLLIGFWFKKPSATAAAMKAFIVNRV 178 Query: 174 GSVLIMIAFLLMGRESGSLDFASFRTLSLSPG------------------------LASA 209 G ++ + G+++ + + + + Sbjct: 179 GDFGFVLGIAGVFVLFGAINLDTIFANASNFAPHEGGGEAGEVILNLFGMQLDKAHALTG 238 Query: 210 VFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQ 268 V LL F G K+ LH+WLP A P+ SAL + MV G+F + +++ Sbjct: 239 VCLLLFMGAMGKSAQFLLHTWLPDAM-EGPTPVSALIHAATMVTAGVFLVARMSPLF--- 294 Query: 269 TGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSL 328 L +V IGAI+A L + DIKR++A+ST +G + +A+GV Sbjct: 295 -ELSPDALTVVTVIGAITAFFAATVGLVQNDIKRVIAYSTCSQLGYMFVALGVG------ 347 Query: 329 HDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRL-HTHDMEKMGALAKRMPWTAAA 387 A+FHL HA FK LLFL AG++I + DM MG L + T Sbjct: 348 --------AYGAAIFHLFTHAFFKALLFLCAGSVIHAVDGEQDMRYMGGLRPHIKVTFWM 399 Query: 388 CLIGCLAI--SAIP----PLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGG 441 +IG LAI IP GF S+ ++ ++ + A +L + Sbjct: 400 MIIGTLAITGVGIPFTPIGFAGFFSKDVIIEATYASHSPVSG-------FAFSLLVIAAL 452 Query: 442 LAVMCFVKMYGITFCGAPRSTHA--EEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKI 499 ++ +TF G PR++H E P M+V + LLA V + + Sbjct: 453 FTSFYSWRLIFMTFFGKPRASHEVMHHVHESPQVMLVPLYLLAIGAVFAGVI---FEGRF 509 Query: 500 MHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAF 559 +A + LV H L + + + + Y Sbjct: 510 YGEEYAEFWKGALFTGAENELVEQFHHVPALVGLSPFIAMLLGFVTAWYM---------- 559 Query: 560 RRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQ 619 Y + L + + D + Sbjct: 560 ----------YIRSPQTPRVLAKQHRVLYHFLLNKWYFDELYDFLFVRTARALGRFLWKK 609 Query: 620 STEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLIAIAV 672 D + + + + LQ+G Y ++ + L+ + + Sbjct: 610 GDVGVIDTYGPNGVAARVVAVTDRVVRLQTGYLYHYAFAMLIGIAALVTWMML 662 >UniRef50_C7LSU3 NADH dehydrogenase (Quinone) n=2 Tax=Bacteria RepID=C7LSU3_DESBD Length = 577 Score = 384 bits (988), Expect = e-105, Method: Composition-based stats. Identities = 210/601 (34%), Positives = 318/601 (52%), Gaps = 27/601 (4%) Query: 75 LRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMG-FFMNIFIASMVALLVMDN 133 +R+D++SAF +L+++++ + YS TY + + +A + + +ASM +L N Sbjct: 1 MRLDAISAFFLLLLAVVGASGAFYSRTYWSQKKHPRSARQSRLWWSAMLASMGMVLTQSN 60 Query: 134 AFWFIVLFEMMSLSSWFLVIARQD-KTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSL 192 F+ +E +LS++FLV +D AG LY +HAG++ + F + ++GS Sbjct: 61 GLHFLFAWESFALSAYFLVTLERDNPKVRAAGRLYLVASHAGTLALFGFFTSLAAQTGSW 120 Query: 193 DFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVK 252 + S + +F +A GFG KAG+ PLH WLP AH APSH SA+MSGV +K Sbjct: 121 ELGPM----TSQTSLAPLFWVALLGFGIKAGVFPLHIWLPSAHANAPSHVSAIMSGVAIK 176 Query: 253 IGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENV 312 +GI+G+++ + L LP G +V +G +SA+LGV +AL + D+KRLLA+ +VEN+ Sbjct: 177 MGIYGLVRFSSWL----PLPAGAGWVVAGLGCVSAVLGVAFALGQHDVKRLLAYHSVENI 232 Query: 313 GIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDME 372 GIIL+ +G AM+ L P ++ L G L H+ NH LFK LLFLGAGA++ T +M Sbjct: 233 GIILIGLGFAMIALDQGRPEWGLLALSGGLLHVWNHGLFKALLFLGAGAVLHSTGTREMS 292 Query: 373 KMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIA 432 ++G L K MPWTAA +G +AIS +PPLNGF+SEW + LF R+ A A P A Sbjct: 293 RLGGLWKTMPWTAALFTLGAMAISGLPPLNGFVSEWLIFSGLFDAGRLRTAASLGAVP-A 351 Query: 433 MVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSA 492 ++L VTG LA+ CFVK+ G+ F GAPRS A A+E M AM +LA C++I L+ Sbjct: 352 AILLGVTGALALACFVKVCGVVFLGAPRSEAAANARECGTGMRAAMGVLALGCLIIGLAP 411 Query: 493 SWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWC 552 ++ P ++ +A + T P + + GT H + ++L A+ LL G Sbjct: 412 AFFWPTLLRVAGVWAQTAPDSGIANHLAPLGTAHALLALAILATAAAAIALLRG------ 465 Query: 553 RSRRAAFRRTGDAWACGYGWE-NAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGL 611 + W CGY M + + F + R + Sbjct: 466 ------RQTRRQTWDCGYRAPTARMQYTAGSFAGIITAWFGWILRPSVHASLPEDIFP-- 517 Query: 612 AHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLIAIA 671 + T E+V+ P ++ RLA + Q G + Y LY+ AALV+L IA Sbjct: 518 -ARSRLESHTPETVLEQVVTPAANSILRLADFARTFQHGRVQSYLLYLCAALVMLSIAAI 576 Query: 672 V 672 + Sbjct: 577 L 577 >UniRef50_C0Z765 NADH-quinone oxidoreductase chain L n=2 Tax=Bacillales RepID=C0Z765_BREBN Length = 637 Score = 384 bits (988), Expect = e-105, Method: Composition-based stats. Identities = 154/674 (22%), Positives = 272/674 (40%), Gaps = 68/674 (10%) Query: 1 MDALQLLTWSLILYLFASLASL--FLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGV 58 MD L W + L+ + + F L A + + V I ++ + G Sbjct: 1 MDTLMHYAWLIPLFPLLAFIVIVSFGRQLKEGAAIVGITLTAVSFGIAVLIFWERFQGGG 60 Query: 59 TLVARFAPPFEFADL----TLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAM 114 T D+ ++ L+A M+++++L+ ++ +YS YM + + Sbjct: 61 TDYNYVIDWLHIGDIVINMGFEVNPLNAMMLVIVTLVSLLVQIYSKGYM--HGDERFPVF 118 Query: 115 GFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDK-TSINAGMLYFFIAHA 173 ++ +F SM+ L++ N + +E++ + S+ LV K + A F + Sbjct: 119 YQYLALFTFSMLGLVISPNLLQVYIFWELVGVCSFLLVGYYYFKNEAKAAAKKAFIVTRI 178 Query: 174 GSVLIMIAFLLMGRESGSLD----FASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHS 229 G + + I L+ +GS + F S L P + + +L F G K+G PLH+ Sbjct: 179 GDLGLFIGICLLFWWTGSFEYGAIFESIALGRLEPWMITLAAILIFIGAMGKSGQFPLHT 238 Query: 230 WLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISAL 288 WLP A P+ SAL + MV G++ + +A +V +G +A+ Sbjct: 239 WLPDAM-EGPTPVSALIHAATMVAAGVYLVAATYPLFIASDTA----LTVVAYVGGFTAI 293 Query: 289 LGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNH 348 L ++DIKR+LA+STV +G +++A+GVA G + FHL+ H Sbjct: 294 FAASIGLTQRDIKRVLAYSTVSQLGYMMMALGVA-----------GAAGYVAGSFHLMTH 342 Query: 349 ALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEW 408 A FK LLFLGAG++I +HT ++ +MG L K+MP TA LIGCLAI+ I P GF S+ Sbjct: 343 AFFKALLFLGAGSVIHAVHTQNVFEMGGLWKKMPITALTFLIGCLAIAGIFPFAGFWSKE 402 Query: 409 YTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQ 468 +++ R + + + + +++ +TF G R H EA Sbjct: 403 AILGAVYGAHRYD----------LLFIALLAAFFTAFYMFRLFFLTFAGKARGKH--EAH 450 Query: 469 EVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQ 528 E P M +L+LA L V+ + AP + + T G Q Sbjct: 451 ESPGVMTGPLLVLALLAVVAGFVNTPYAPLLSDWLLSTNTGTAITSIFGGGSEHAAAWLQ 510 Query: 529 VTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLR 588 + L+ +L + + L YG ++ + + M L Sbjct: 511 IVALLISILGVVLAYLM------------------------YGKKSISSDTIPETMPWLY 546 Query: 589 VVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQ 648 + + + + + G + + + ++ TQ + +Q Sbjct: 547 QLSYKKYYIDELYHNVIVRPLGWIGFV--LDVFDKYIVDGLVGLTAKITQGIGSLHARVQ 604 Query: 649 SGDFRLYCLYVVAA 662 SG + Y V+ Sbjct: 605 SGQIQSYGAMVIFG 618 >UniRef50_C6VXR9 Proton-translocating NADH-quinone oxidoreductase, chain L n=5 Tax=Bacteria RepID=C6VXR9_DYAFD Length = 639 Score = 384 bits (988), Expect = e-105, Method: Composition-based stats. Identities = 139/685 (20%), Positives = 257/685 (37%), Gaps = 66/685 (9%) Query: 1 MDALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGV-- 58 M A L+ L+ + + + + + A+ + G ++V + + A Sbjct: 1 MSASLLILIPLLPLVGFLINGIGFPNIPKGAVGIIGTLAVVASFVLSVMTFNAFVAAGSQ 60 Query: 59 ----TLVARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAM 114 L + ++D LS M+++I+ + + +YS+ YM G Sbjct: 61 PFVLPLFDWITVGDLHIPFSFQIDQLSLLMLMIITGVGSLIHIYSIGYMHHDSG--FGKF 118 Query: 115 GFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSIN-AGMLYFFIAHA 173 ++N+F+ M+ L++ N + +E + L S+ L+ T+ N A F + Sbjct: 119 FAYLNLFLFFMLLLVLGSNYVIMFIGWEGVGLCSYLLIGFWNKNTNYNNAARKAFIMNRV 178 Query: 174 GSVLIMIAFLLMGRESGSLDFASFRTLSLSP-----GLASAVFLLAFFGFGAKAGMMPLH 228 G + ++ + GS+++ + + + + + L F G K+ +PL+ Sbjct: 179 GDLGFLLGIFTIIATFGSVEYTEVFSKAAAGFQVGDPVIITITLFLFVGAMGKSAQIPLY 238 Query: 229 SWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISA 287 +WLP A A P+ SAL + MV GI+ +++ + L +V IG +A Sbjct: 239 TWLPDAM-AGPTPVSALIHAATMVTAGIYMVIRSNVLY----SLAPSTLEIVGIIGGATA 293 Query: 288 LLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLN 347 L L + DIK++LA+STV +G + + +G + ++FH++ Sbjct: 294 LFAASIGLLQNDIKKVLAYSTVSQLGYMFMGLG--------------AMAYSASMFHVIT 339 Query: 348 HALFKGLLFLGAGAIISRL-HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFIS 406 HA FK LLFLGAG++I + D+ MG L K++P T LI +AIS IPP GF S Sbjct: 340 HAFFKALLFLGAGSVIHAMSDEQDIRSMGGLRKKLPVTFLTFLIATIAISGIPPFAGFFS 399 Query: 407 EWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRS--THA 464 + +F ++ I V+ + + ++ +TF G R Sbjct: 400 KDEILAHVFEHNK-----------ILWVIGVLGSVMTSFYMFRLLFLTFFGTFRGTHEQE 448 Query: 465 EEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGT 524 E P +M V +++LA L A H F + Sbjct: 449 HHLHESPASMTVPLIILAILSAAGGFIGVPEALHGSHQLAQFMAPLYDLAKTANPAAFAH 508 Query: 525 FHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVM 584 + +L+ + L + + D Sbjct: 509 TSLSHSEEYMLMAISVAAALISAIAAYVMYVQKGAVPAADTEE----------------K 552 Query: 585 QPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEI 644 L+ V + + + D + A F + +I +V AK + Sbjct: 553 SGLQRVIYNKYYVDELYDSVFVKPVKVLSNFLYAAG--EFAIDLIIDAVVKLVGLFAKLL 610 Query: 645 QHLQSGDFRLYCLYVVAALVVLLIA 669 + Q+G Y +V +VV+L Sbjct: 611 RKTQTGSTGEYVFAMVIGIVVILFW 635 >UniRef50_A5FPH4 NADH dehydrogenase (Quinone) n=5 Tax=Dehalococcoides RepID=A5FPH4_DEHSB Length = 644 Score = 384 bits (986), Expect = e-105, Method: Composition-based stats. Identities = 199/653 (30%), Positives = 339/653 (51%), Gaps = 36/653 (5%) Query: 23 FLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAPPFEFADLTLRMDSLSA 82 + + + ++ + ++ G Q+ G L D+ +D L++ Sbjct: 21 IVFNHGSKKVWQGVLWLVIAAALCLLIGSLQIFFGNPLDISLWSIASGLDIAFHLDRLAS 80 Query: 83 FMVLVISLLVVVCSLYSLTYMREYE-GKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLF 141 F V++ISL+ + ++YSL Y + A + FM +FI SM+ ++ N F I + Sbjct: 81 FFVIIISLISLCVAVYSLGYNNHISSNERANLLSAFMAVFILSMIGVVASANTFSLIFFW 140 Query: 142 EMMSLSSWFLVIA-RQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRTL 200 E+M+LSS+FL++ Q+ + AG+ YF + ++ +M+ ++M ++GS + Sbjct: 141 EIMALSSFFLMMNDYQEPFTQRAGVYYFVLTQLSTIFLMLMAVVMYIQNGSF---ALSLS 197 Query: 201 SLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILK 260 S + S VF+LAF FG KAG++PLH WLP AH A+PS+ SALMSGVM+K+ I+G+++ Sbjct: 198 GASSVIQSLVFVLAFLAFGIKAGIIPLHKWLPYAHSASPSNVSALMSGVMLKVAIYGLVR 257 Query: 261 VAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVG 320 MD+L+ +WWG+ ++ +G ISALLG++YA E D+K LLA+ ++EN+GIIL+ +G Sbjct: 258 FLMDVLSP---EMWWGVGILLLGMISALLGIIYAFKEHDLKMLLAFCSIENIGIILMGIG 314 Query: 321 VAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKR 380 + ++ L ++ L ALFH LNHA+FK LLF+ AG+++ + ++EKMG L K Sbjct: 315 LYVIFGLYGLDTLAMLALGSALFHSLNHAIFKSLLFMTAGSVVIAVGDRNIEKMGGLIKL 374 Query: 381 MPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTG 440 MP+T+ L+G ++ISA+PP NGF+SE ++S F + ++++ + +LA+T Sbjct: 375 MPYTSVIFLVGAVSISALPPFNGFMSELMLFESFFQSFSLAESSIKILLFSVLAILALTS 434 Query: 441 GLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIM 500 LA CFVK +G F PRS A A+EV +MI+ +LA C+++ L A + Sbjct: 435 ALAAACFVKAFGTVFLAMPRSQEAASAKEVSKSMIIGPAILAVACLVLGLFAVQIFSV-- 492 Query: 501 HIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFR 560 + L+ L + + L + R Sbjct: 493 ------------------------AGYSFDLPDMSLVGLVLVIFGVLVFGMVRLFSPRKS 528 Query: 561 RTGDAWACGYGWE-NAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRL-NKGLAHVTARA 618 R + WACGY + +G +PL +F ++R R + + + + A Sbjct: 529 RRSETWACGYVRPTPRFEYTASGFAEPLFQIFRLIYRTRHYNERSYEDNQQAIFKQGKSA 588 Query: 619 QSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLIAIA 671 T F+DE + P+ R+++ I LQ D + LY ++++++A Sbjct: 589 IHTIKFFDEYIYLPVAGLFGRISRFISRLQDVDLGSHILYSFITVLLVILAAR 641 >UniRef50_Q9RGZ5 Na(+)/H(+) antiporter subunit A n=9 Tax=Firmicutes RepID=MRPA_BACPF Length = 805 Score = 384 bits (986), Expect = e-105, Method: Composition-based stats. Identities = 141/680 (20%), Positives = 273/680 (40%), Gaps = 18/680 (2%) Query: 3 ALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVA 62 L ++ +L A L R+ + + I I ++ G + Sbjct: 1 MTVLHWATISPFLLAILIPFLYKYARRIHTGWFVLVLPLVLFIYFIQYLSITSTGGVVEH 60 Query: 63 RFAP-PFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIF 121 P + T+ +D LS L+I+ + + LYS+ Y+ + ++ +F Sbjct: 61 TIPWVPSLGINFTVFVDGLSLLFALLITGIGTLVILYSIFYLSKKTE-SLNNFYVYLLMF 119 Query: 122 IASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKT-SINAGMLYFFIAHAGSVLIMI 180 + +M+ +++ DN V +E+ SL+S L+ + S I G ++ Sbjct: 120 MGAMLGVVLSDNLIVLYVFWELTSLASSLLISYWFHREKSTYGAQKSMLITVFGGFAMLG 179 Query: 181 AFLLMGRESGSLDFASFRT---LSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPA 237 F L+ +G+ L S L +L G K+ P H WLP A Sbjct: 180 GFSLLYVMTGTFSIRGIIENVDLVTSSELFLPAMILVLLGAFTKSAQFPFHIWLPDAM-E 238 Query: 238 APSHASA-LMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALA 296 AP+ SA L S MVK GI+ + ++ W L+ G ++ L G A+ Sbjct: 239 APTPVSAYLHSATMVKAGIYLVARLTPVFAGSAE----WFWLLTGFGVVTLLWGSTSAVR 294 Query: 297 EQDIKRLLAWSTVENVGIILLAVGVA---MVGLSLHDPLLTVVGLLGALFHLLNHALFKG 353 ++D+K +LA+STV +G+I+ +G+ + DP ++ A+FHL+NHA FKG Sbjct: 295 QKDLKGILAFSTVSQLGLIMTLLGLGSAAIYFGESVDPAFYSFAIMAAIFHLINHATFKG 354 Query: 354 LLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQS 413 LF+ AG I T D+ K+G L MP T LIG +++ +PP NGF+S+ + + Sbjct: 355 SLFMTAGIIDHETGTRDIRKLGGLMAIMPVTFTVSLIGLASMAGLPPFNGFLSKEMFFTA 414 Query: 414 LFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAE-EAQEVPN 472 L + + A ++ G I +V+ + + + M+ TF G + + + + E P Sbjct: 415 LLRATEMNAFNMETFGIIIVVLAWIASVFTFLYCLIMFFKTFTGKFKPENYDVKVHEAPI 474 Query: 473 TMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPS 532 M+++ ++L +L ++ + LA I+ A + +H Sbjct: 475 GMLISPVILGSLVIVFGFFPNILAYTIIEPAMQAVLPTVLADGELFHVNIYMWHGFNAEL 534 Query: 533 LLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVV-F 591 + + ++A ++ L ++ A + + D Y + +G+ + +++ Sbjct: 535 FMTMGVVAAGIILFLMMKNW-AKAAFYMKERDPLNWFYDSSLSGVITGSQFVTRIQMTGL 593 Query: 592 SALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGD 651 + + L L + A A T + +++ +A + Sbjct: 594 LRDYFAYMIVFMILLLGYTMFRYDAFAIDTTNVTEIAPYIWVITIVFIVATLSIPFINKR 653 Query: 652 FRLYCLYVVAALVVLLIAIA 671 + V ++ L+ + Sbjct: 654 ITAVVVVGVIGFLLALLFVV 673 >UniRef50_C6W0W0 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W0W0_DYAFD Length = 658 Score = 383 bits (984), Expect = e-104, Method: Composition-based stats. Identities = 152/692 (21%), Positives = 269/692 (38%), Gaps = 61/692 (8%) Query: 2 DALQLLTWSLILYLFASLASLFLLG--LDRLAIKLSGITSLVGGVIGIISGITQLHAGVT 59 A L + L+ F+ L+L G L++ A + + ++ G +I Sbjct: 4 TAYHLPAYLLLGLPFSCFLLLWLGGTSLNKYAGWIGALVTVAGLLISFTYIPNLGIPYSL 63 Query: 60 LVARFAPPFEF---ADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGF 116 L DL+LR D+LS M++++ + ++ LYS YM + + Sbjct: 64 LQVPLPWFAVGERYIDLSLRFDTLSTLMLVIVHFVALLVQLYSTAYM--HADRNVNRYFA 121 Query: 117 FMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTS-INAGMLYFFIAHAGS 175 F+ +F+ SM+ +++ N + +E++ LSS+ L+ K + A F + G Sbjct: 122 FIQLFLFSMLGIVLASNLLMMYIFWELVGLSSYLLIGFWYTKKRPVWAAQKAFVLNRIGD 181 Query: 176 VLIMIAFLLMGRESGSLDFASFRT--LSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPR 233 + L++ G D ++ G+ + + + F G K+ PL WLP Sbjct: 182 AAFLTGILMLFYYVGVTDLEVLALEIGTIPQGILTVIGICLFGGCVGKSAQFPLSGWLPD 241 Query: 234 AHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVL 292 A P+ SAL + MV GIF + +++ L ++++ IGAI+ ++G + Sbjct: 242 AM-EGPTPVSALIHAATMVAAGIFLLARISFLLTVDA------RLVILVIGAITMVIGAV 294 Query: 293 YALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFK 352 AL DIK++LA+ST+ +G++++AVG A+FHL HA FK Sbjct: 295 KALNGWDIKKVLAYSTMSQLGLMVMAVGFG--------------SWQTAMFHLATHAFFK 340 Query: 353 GLLFLGAGAIISRL-----HT--------HDMEKMGALAKRMPWTAAACLIGCLAISAIP 399 LFL AG++I + HT DM MG L K +P T I A++ +P Sbjct: 341 AGLFLSAGSVIHAVTPHEEHTGAEPQFDPQDMRTMGGLRKALPITFICFSICAAALAGLP 400 Query: 400 PLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAP 459 +GF+S+ F + A G + V++ ++ GL + + F G Sbjct: 401 FFSGFLSKDAIITEGF----LWASEFGALGYLFPVLVVLSAGLTAFYMTRQVWLIFFGNE 456 Query: 460 RSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIA 519 R A E P M + M LL+AL V S + + F + Sbjct: 457 RFPAAVHPHESPVAMWLPMALLSALSVFCWFSINPF-----NAEGWFLQWIGQEHGEHLI 511 Query: 520 LVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPS 579 VP S+ L P A W GY E+ Sbjct: 512 WVPFVASAFTFVSIFLAYRETGSANPFKVNDPIPVGEPAQSPWN--WLRGYSNEHYFLIP 569 Query: 580 GNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQR 639 + + L+V + L KG + + + + V + + Sbjct: 570 FEYITKYLKVFEKNVVDALVDLVA-----KGSLVFGHLIAWFDRTFIDGAVNLTVFSIRS 624 Query: 640 LAKEIQHLQSGDFRLYCLYVVAALVVLLIAIA 671 + +++Q G + Y + V + +L++ + Sbjct: 625 AGQAARNMQGGRIQSYYIVTVMGIFLLILWLV 656 >UniRef50_B3EIA1 Proton-translocating NADH-quinone oxidoreductase, chain L n=27 Tax=cellular organisms RepID=B3EIA1_CHLL2 Length = 770 Score = 383 bits (983), Expect = e-104, Method: Composition-based stats. Identities = 137/592 (23%), Positives = 231/592 (39%), Gaps = 75/592 (12%) Query: 1 MDALQLLTWSLILYLFASLASLFLL--GLDRLAIKLSGITSLVGGVIGIISGITQLHAGV 58 M +L L+ +++L S L L R + + + + + Sbjct: 1 MHSLIQLSIAVLLLPLLSFVILIFFNKRLPRRGDFIGVGILGTTFALSLYIFWSVVVQAY 60 Query: 59 TLVARFAPPFEFADLT-------------LRMDSLSAFMVLVISLLVVVCSLYSLTYMRE 105 R A F + DL + +D+L+A M+ +++L+ + LYS YM Sbjct: 61 DPAFRVAWDFTWIDLGNVPGVGPLVIKMGIVIDNLTAIMLAMVTLISFLVHLYSTGYMAG 120 Query: 106 YEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKT-SINAG 164 ++ IF SM+ +++ DN F + +E++ LSS+ L+ +K + +A Sbjct: 121 DP--RYGRFFAYLGIFTFSMLGIVLSDNLFAIYIFWELVGLSSYLLIGFYFEKDSAADAQ 178 Query: 165 MLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRT------LSLSPGLASAVFLLAFFGF 218 F G + + + L++ + + + +S +A +L F G Sbjct: 179 KKAFLANRVGDIGMWLGILILYSQFHTFSYQEIFANLAAGKFGMSQAWLTAAGILLFMGC 238 Query: 219 GAKAGMMPLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGI 277 K+ PLH WLP A P+ SAL + MV G++ + ++ + L A Sbjct: 239 VGKSAQFPLHVWLPDAM-EGPTPVSALIHAATMVAAGVYFVARIFVLLTADA------LH 291 Query: 278 LVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVG 337 ++ IGA +A + A+ + DIKR+LA+STV +G ++L +GV Sbjct: 292 VIAFIGAFTAFMAATIAITQHDIKRVLAYSTVSQLGYMVLGLGVG--------------A 337 Query: 338 LLGALFHLLNHALFKGLLFLGAGAIISRL-HTHDMEKMGALAKRMPWTAAACLIGCLAIS 396 ALFHL+ HA FK LFLG+GAII + H DM MG L K MPWT A + LA++ Sbjct: 338 YSAALFHLVTHAFFKACLFLGSGAIIHAMHHEQDMRWMGGLRKNMPWTFATFTLATLALA 397 Query: 397 AIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFC 456 +P +GF+S+ + E + P + L + + F Sbjct: 398 GLPLTSGFMSKDAILAGAIGFANAEGGGIYYLIPFLGF---FSAMLTAFYMGRQIWLVFF 454 Query: 457 GAPRS------------------------THAEEAQEVPNTMIVAMLLLAALCVLIALSA 492 G R+ A EV M +++LAAL + + + Sbjct: 455 GESRTHLKPADDHHHGHDAHAAHGHDDHHEEAHGVHEVAWNMRTPLVILAALSIFA-VYS 513 Query: 493 SWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLL 544 + TP V S + + LL A+P Sbjct: 514 PDPLDGAKGWFMSMVPTPETVVGSAPGQAKPHETSSAAGNAAHLLAEAVPGG 565 >UniRef50_A7HHY8 Proton-translocating NADH-quinone oxidoreductase, chain L n=4 Tax=Anaeromyxobacter RepID=A7HHY8_ANADF Length = 676 Score = 382 bits (981), Expect = e-104, Method: Composition-based stats. Identities = 159/693 (22%), Positives = 263/693 (37%), Gaps = 71/693 (10%) Query: 7 LTWSLILYLFASLAS--LFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARF 64 W++IL+ A L + + + L + +++G +I + G L R Sbjct: 14 YLWAIILFPLAGAIVNGLVGRRIGKGNVTLVALGAMIGALIVSTVAFAWVVQGGVLHFRG 73 Query: 65 APP----------FEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAM 114 P L +D LS M++V++ + + +YS +YM + G A Sbjct: 74 EPWIRVAGPDGRALVSIGWGLFVDRLSGTMIMVVTGVGTLIHIYSASYMSHEDDAGYARY 133 Query: 115 GFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSIN-AGMLYFFIAHA 173 ++N+F+A+M+ L++ D V +E + L S+ L+ + AG F Sbjct: 134 FTYLNLFVAAMLTLVLGDTLVLTFVGWEGVGLCSYLLIGFWYTDPAKAFAGRKAFVTNRI 193 Query: 174 GSVLIMIAFLLMGRESGSLDFASFRTLSLS-----------------PGLASAVFLLAFF 216 G +I + G+ + + ++ + + + F Sbjct: 194 GDFGFLIGLFALLSIFGTASYGDLQAIARTIDPAATIQVGTFAGRTFQWAITFALIGLFV 253 Query: 217 GFGAKAGMMPLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWW 275 G K+ +PL+ WLP A A P+ SAL + MV G++ + + A L Sbjct: 254 GACGKSAQLPLYVWLPDAM-AGPTPVSALIHAATMVTAGVYLVARNAYLF----SLAPAA 308 Query: 276 GILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTV 335 V +GA++AL L A + DIK++LA+STV +G + + VGV Sbjct: 309 MATVTIVGALTALFAALIAFVQTDIKKVLAYSTVSQLGFMFIGVGVG------------- 355 Query: 336 VGLLGALFHLLNHALFKGLLFLGAGAIISRLH-THDMEKMGALAKRMPWTAAACLIGCLA 394 + HL+ HA FK LFLGAG+++ + D+ KMG L K+MP TAA I LA Sbjct: 356 -AWWAGVLHLVTHAFFKACLFLGAGSVMHGMGDETDIRKMGGLLKKMPHTAATFGIATLA 414 Query: 395 ISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGIT 454 I+ PL+GF S+ + A G IA V+ AV +++ +T Sbjct: 415 ITGFVPLSGFWSKDAILGNALFSHN---PAWHQVGQIAYVLGAVAALGTAFYMSRLFFLT 471 Query: 455 FCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATV 514 F G PR+ AE A E M + + +LA L V+ A+ A + + H+ F P Sbjct: 472 FVGKPRTHAAEHAHESSPVMTIPLWILAILAVVAAVLALPVHGPLGHVFERFVQ-PVFAA 530 Query: 515 ASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWEN 574 + L H PS + L L AW G Sbjct: 531 GTARLLEVEHLHAGEHPSWPYFAAWGIAALGTLV----------------AWTMYAGPAI 574 Query: 575 AMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIV 634 A+ + FR+ + + L D + + Sbjct: 575 AVPGKLALAFPRVYRFAYDKFRVDELYQAIIIEPLRLVAYGLWRIVDVFAIDGLFVNGVA 634 Query: 635 SATQRLAKEIQHLQSGDFRLYCLYVVAALVVLL 667 A + Q+GD + Y + A V+L Sbjct: 635 RAVGFAGSMFRVAQNGDLQRYAAVMAVAAAVIL 667 >UniRef50_B8FRJ9 Proton-translocating NADH-quinone oxidoreductase, chain L n=11 Tax=Firmicutes RepID=B8FRJ9_DESHD Length = 651 Score = 382 bits (981), Expect = e-104, Method: Composition-based stats. Identities = 149/698 (21%), Positives = 271/698 (38%), Gaps = 95/698 (13%) Query: 1 MDALQLLTWSLILYLFASLASLFL--LGLDRLAIKLSGITSLVGGVIGIISGITQLHAGV 58 M+ L W + F S + L RL+ +S + L + I G+ + +G Sbjct: 5 MNDLFQWAWLIPFLPFLSFLLIALVTKRSKRLSSTISILAILTSFGLSIAIGLGVIQSGS 64 Query: 59 TLVA--------RFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKG 110 +V + D +D +SA M+ V++L+ + +YS+ YM + G Sbjct: 65 QIVENPVLTTVNWLSIGGLHIDFGTLIDPMSAMMLFVVTLVASMVQIYSIGYM--HGDPG 122 Query: 111 AAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDK-TSINAGMLYFF 169 + F ++F ASM+ +++ N + +E++ L S+ L+ K ++ A F Sbjct: 123 FSRYYAFQSLFAASMLGMVLATNLLQLFIFWELVGLCSYLLIGFWFFKVSAREAAKKAFI 182 Query: 170 IAHAGSVLIMIAFLLMGRESGSLDFASFRTLSLSPG-------------LASAVFLLAFF 216 G +++ L + G+LDF +LS+ + + +L F Sbjct: 183 TTRVGDFGLLLGILFLYNTFGTLDFYGPGSLSVQMATSFHDFALIGGVSYLTIMAILVFI 242 Query: 217 GFGAKAGMMPLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWW 275 G K+G PLH WLP A P+ SAL + MV G++ + ++ + Sbjct: 243 GPVGKSGQFPLHVWLPDAM-EGPTPVSALIHAATMVVAGVYLVARMFFLF---DNASPFA 298 Query: 276 GILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTV 335 LV +GA +A+ A+A+ DIKR+LA+ST+ +G ++ A+GV Sbjct: 299 LQLVAGMGAFTAIFAATIAIAQDDIKRILAYSTLSQLGYMMFALGVG------------- 345 Query: 336 VGLLGALFHLLNHALFKGLLFLGAGAIISRL-HTHDMEKMGALAKRMPWTAAACLIGCLA 394 L ++FHL+ HA FK L+FLGAG++I L H ++ MG L K+MP T IG LA Sbjct: 346 -SLTASMFHLMTHAFFKALMFLGAGSVIHALHHKQNIWDMGGLWKKMPITGTTFFIGVLA 404 Query: 395 ISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGIT 454 I+ IPP GF S+ + + PI + T L +++ + Sbjct: 405 IAGIPPFAGFFSKDEILLAAYHGH-----------PIIFAVGLFTAFLTAFYMSRLFFVA 453 Query: 455 FCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATV 514 F G + + E P M + +++LA V+ A Sbjct: 454 FMGEEKPEN--HPHESPWVMTLPLIILAFFSVVGGWVALP-----------------EHN 494 Query: 515 ASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWEN 574 H + + + ++A L GL ++ +R + Y Sbjct: 495 FGYFVHYGEFHHESINWMIATISIIAGVLGIGLAYITYVTRAIKAENVVARFPGVYKLLK 554 Query: 575 AMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIV 634 + + V + + + + ++ + Sbjct: 555 NKYYIDEIYLWFIHKVMDGIV-------------------AKVLYWFDLYIVDGIVNGLA 595 Query: 635 SATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLIAIAV 672 + T+ + ++ +G + Y L A+VV+ + A+ Sbjct: 596 ALTRGSGRALRRTTTGQMQTYALVFFVAIVVIYLVFAL 633 >UniRef50_C5A2R1 Formate hydrogenlyase II subunit D (Mhy2D) n=1 Tax=Thermococcus gammatolerans EJ3 RepID=C5A2R1_THEGJ Length = 694 Score = 382 bits (981), Expect = e-104, Method: Composition-based stats. Identities = 182/608 (29%), Positives = 286/608 (47%), Gaps = 27/608 (4%) Query: 1 MDALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGV-T 59 M +L T ++ILYL + LA L L R +I + + + + + + ++ L + Sbjct: 1 MKMKELFTLTVILYLISILAVLPLRKNYRASITVGHVFTGLASLSLLAFTVSVLPEALKG 60 Query: 60 LVARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGF-FM 118 F A + +D LS + LV+ L + S+YS YM YE G + Sbjct: 61 KAIEFTYDLGVAKIPFHVDGLSLILCLVLGSLGLATSIYSPKYMEFYERFGRGWLYVVLY 120 Query: 119 NIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKT-SINAGMLYFFIAHAGSVL 177 + F+ SMV ++ N WF+ +E+M+ +S+ L++ D+ AG YF H S L Sbjct: 121 STFVLSMVLIVTTSNFLWFVFFWEVMTFTSYLLMVWENDEEYVRKAGWKYFVTMHVASTL 180 Query: 178 -IMIAFLLMGRESGS---LDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPR 233 +++A L+ ++GS L+F + L L P +LL GFG+KAG++PLH WLP Sbjct: 181 PLIVALALLYAKAGSIEGLNFDNLSKLHLGP----IYYLLFLVGFGSKAGVVPLHFWLPD 236 Query: 234 AHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLY 293 AHPAAPS+ SAL+SG M+K+ ++G+++ +L L +G +V +G ++ +G LY Sbjct: 237 AHPAAPSNVSALLSGAMIKVAVYGLIRTTCFILG---LNETFGYIVAILGTVTLTVGTLY 293 Query: 294 ALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDP--LLTVVGLLGALFHLLNHALF 351 AL + D KRLLA+ +V +G I L VG + ++ + + L+HL+NHA+F Sbjct: 294 ALKQTDAKRLLAYHSVGQMGYIWLGVGAGIALMAKGGSYAAFGAIAMAAGLYHLVNHAIF 353 Query: 352 KGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTW 411 KGLLFL AG+++ R HT ++ +G LAK MP TA I ++I+ PP NGF+S+W + Sbjct: 354 KGLLFLSAGSVLYRTHTRELNVLGGLAKLMPLTALFTFIAAMSIAGEPPFNGFMSKWMIY 413 Query: 412 QSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVP 471 Q F VM + FVK Y F G P + E A+EVP Sbjct: 414 QGTFLSGDG-------LLVFCGVMALFISAATLASFVKFYTTAFGGVP-TKVTENAEEVP 465 Query: 472 NTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTP 531 ++M+V LAALC+L L S + P ++ T T + S + + Sbjct: 466 SSMLVGKGFLAALCLLFGLIPSSIIPLLLAPGKVLTGTDLSGWISTKYWLVTIKAPGMPS 525 Query: 532 SLLLLL--LLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYG-WENAMAPSGNGVMQPLR 588 L + +L L S ++ W G P Sbjct: 526 GGETYFNPWLLVGVLGVLAGAMLVSYPNRPKKVVKVWTTGEPVRMEHYKLKAMHYYGPFE 585 Query: 589 VVFSALFR 596 L+ Sbjct: 586 EYIHGLYH 593 >UniRef50_C5QQQ5 CPA3 family monovalent cation:proton (H+) antiporter-3 subunit A n=2 Tax=Staphylococcus RepID=C5QQQ5_STAEP Length = 816 Score = 381 bits (978), Expect = e-104, Method: Composition-based stats. Identities = 127/576 (22%), Positives = 248/576 (43%), Gaps = 20/576 (3%) Query: 2 DALQLLTWSLILYLFASLASLFLLGL-DRLAIKLSGITSLVGGVIGIISGITQLHAGVTL 60 + + L +++L L +L L R+ + + + I IS I+ +G T+ Sbjct: 14 NIVSWLHIAVLLPLIFALIIPILYRFVKRIHLGWFVLPVPIVLFIYFISLISITMSGNTV 73 Query: 61 VARFAP-PFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMN 119 + P + L +D L L+I+ + + LYS+ Y+ + E G ++ Sbjct: 74 MKTLNWMPHFGMNFNLYVDGLGLLFSLLITGIGSLVVLYSIGYLSKSEQLGN--FYCYLL 131 Query: 120 IFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTS-INAGMLYFFIAHAGSVLI 178 +F+ +M+ +++ DN + +E+ S SS+ L+ ++K + I + G + + Sbjct: 132 LFMGAMLGVVLSDNLIILYLFWELTSFSSFLLISFWREKKASIYGAQKSLILTVLGGLSL 191 Query: 179 MIAFLLMGRESGSLDFASF---RTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAH 235 + +L+ + + + + + +L G K+ +P + WLP A Sbjct: 192 LGGIILLSLAADTFSIQTMIEKASEIQNSPYFILAMILVMIGAFTKSAQVPFYIWLPDAM 251 Query: 236 PAAPSHASA-LMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYA 294 AP+ SA L S MVK G++ + ++ + W + +G I+ L A Sbjct: 252 -EAPTPVSAYLHSATMVKAGLYLVARMTPIF----AISEGWVWTITLVGLITLFWASLNA 306 Query: 295 LAEQDIKRLLAWSTVENVGIIL--LAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFK 352 +QD+K +LA+STV +G+I+ L +G D L V G + A+FHL+NHA FK Sbjct: 307 TKQQDLKGILAFSTVSQLGMIMSMLGIGAVSYHYQGADSQLYVAGFVAAIFHLINHATFK 366 Query: 353 GLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQ 412 G LF+ G + T +++K+G L MP + +I L+++ +PP NGF+S+ + Sbjct: 367 GALFMITGGVDHATGTRNVKKLGGLLTIMPISFTMTIITALSMAGVPPFNGFLSKEKFLE 426 Query: 413 SLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTH-AEEAQEVP 471 ++ ++ + ++L G I ++ V + +K F G + + A E Sbjct: 427 AMIDVTHADLMSLNTLGIIFPIIAIVGSIFTFVYSIKFIMHIFFGKYKPDSLPKSAHESS 486 Query: 472 NTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTP 531 M+++ ++L L V+ L S L I+ A + A T Sbjct: 487 MLMLLSPIILTILVVVFGLFPSILTQSIIEPATQAVSQTTGITA---EFHLFHGITPAFI 543 Query: 532 SLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWA 567 S L++ ++ + L+ + + + W Sbjct: 544 STLVIYVVGILLILTFSYWVRLLEAQPNQLKFNYWY 579 >UniRef50_A6UVK0 NADH dehydrogenase (Quinone) n=2 Tax=cellular organisms RepID=A6UVK0_META3 Length = 723 Score = 381 bits (978), Expect = e-104, Method: Composition-based stats. Identities = 213/668 (31%), Positives = 351/668 (52%), Gaps = 26/668 (3%) Query: 7 LTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAP 66 + + + + L + +L+ +S + +G + G + I + + + Sbjct: 72 MLICISIIVLGGLLGVLFSKWFKLSKIISILIISMGSLFGTYNAIMVILNNKSYELTYLV 131 Query: 67 PFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAM-GFFMNIFIASM 125 ++ ++D +S F V+ L+ ++ ++YS YM + + K A + +ASM Sbjct: 132 E-SIIPISFKIDPISMFFSAVVLLVSIMAAIYSYGYMDDKKRKLATGFQYLNFAVLVASM 190 Query: 126 VALLVMDNAFWFIVLFEMMSLSSWFLVIARQ-DKTSINAGMLYFFIAHAGSVLIMIAFLL 184 V + + +N+ F++ +E+MS+SS+ LV+ + +G +Y HAG + I +F L Sbjct: 191 VGVTISNNSIIFLLFWELMSISSFLLVMFDGFKEEVRKSGYIYLIYTHAGGMFIFASFAL 250 Query: 185 MGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASA 244 +GS+ F F + L AVFLL F GF +KAG+ P HSWLP AHP APSH SA Sbjct: 251 AYVATGSISFDQFSN--MPDYLKIAVFLLGFVGFASKAGVFPFHSWLPYAHPVAPSHVSA 308 Query: 245 LMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLL 304 +MSGVM+K+GI+G + M +L ++ G +V+ +G +S +LGV YALA+ DIKRLL Sbjct: 309 VMSGVMIKMGIYG---IIMLILLLGINNIYIGYMVLILGILSGILGVAYALAQHDIKRLL 365 Query: 305 AWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIIS 364 A+S++EN+GIIL+ +G+ ++G H+ + ++G GAL H+LNHALFK LLF+GAGA+I Sbjct: 366 AYSSIENIGIILIGLGIGLIGKYYHNETIALLGFAGALLHILNHALFKSLLFMGAGAMIK 425 Query: 365 RLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVA 424 TH +E MG L KRMP T+ LIG LAIS IPP NGF+SE + F+ ++V Sbjct: 426 STGTHSLEGMGGLMKRMPTTSLVFLIGSLAISGIPPFNGFVSELLIYMGGFN-GLNDSVG 484 Query: 425 LQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAAL 484 L +A ++ L + GGLA CF K+ GI+F GAP++ + A+ P+ M V +LLA + Sbjct: 485 LLIASTFGIIALVLIGGLATACFTKVLGISFLGAPKTKASANAKASPHVMSVPQILLALI 544 Query: 485 CVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLL 544 C++I + I+ IA++ + +GI + ++L+ + L Sbjct: 545 CIIIGIFPILFVNPIIKIANS-------SNLAGITACSQLSVFPNLTGVYIILIALVSLF 597 Query: 545 PGLYWLWCRSRRAAFRRTGDAWACGY-GWENAMAPSGNGVMQPLRVVFSALFRLRQQLDP 603 L ++ +++ G W CGY + M + + P+ F ++ P Sbjct: 598 VVLRMIYYKNK----IVDGYTWDCGYSNPTSKMQYTASSYASPIVEFFKPFVIIKTHEKP 653 Query: 604 TLRLNKGLAH-VTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAA 662 + A + E ++ +I+PI I++L+ G+F Y YV+ Sbjct: 654 VKGIFPHEAKYHSHSKDLAEAVFELLLIKPISVGL----SVIRYLKDGNFNYYMGYVIII 709 Query: 663 LVVLLIAI 670 + +LL I Sbjct: 710 ISLLLSYI 717 >UniRef50_Q12ZH7 Na+/H+ antiporter subunit n=2 Tax=Methanosarcinaceae RepID=Q12ZH7_METBU Length = 788 Score = 381 bits (978), Expect = e-104, Method: Composition-based stats. Identities = 133/595 (22%), Positives = 229/595 (38%), Gaps = 27/595 (4%) Query: 1 MDALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTL 60 MD+ +T ++ L + + L + + + + I T++ G + Sbjct: 1 MDSFNAITVAIFLPFIFAGLVPVMEKLLKQRVGWFAAATALASFALIGMAATEVIEGQII 60 Query: 61 VARFAP-PFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMN 119 + P + T+ D L+ + + S + V+ YS YM E ++ Sbjct: 61 QGSISWIPSAGVNFTIYADGLATMIGFIASGIGVLIMSYSNGYMSRTED--LTRYYQYLL 118 Query: 120 IFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDK-TSINAGMLYFFIAHAGSVLI 178 +F+ SM+ ++ N + +E+ S++S+ L+ + K SI + +G + + Sbjct: 119 LFMGSMIGMVFSGNTIQLFIFWELTSITSFMLIGYWRHKPESIYGATKSLLLTASGGLAM 178 Query: 179 MIAFLLMGRESGSLDFASFRTLSL------SPGLASAVFLLAFFGFGAKAGMMPLHSWLP 232 + FLL+G +GS + A+ L +L G AK+ P + WLP Sbjct: 179 LAGFLLLGNITGSFELAAILNDPQVINAIKEHELFLITLILILIGAAAKSAQGPFYIWLP 238 Query: 233 RAHPAAPSHASA-LMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGV 291 A AP+ SA L S MVK GI+ + ++ W ILV G I+ L+ Sbjct: 239 NAM-EAPTPVSAFLHSATMVKAGIYLVARIHPIFSGTEA----WFILVSGTGIITMLVAG 293 Query: 292 LYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALF 351 A + DIK +LA+ST+ + ++ G +G+ A FHLLNHA F Sbjct: 294 FLAFRQTDIKGILAYSTISQLAYMMTMYG-------YTTHHEPGIGVAAATFHLLNHAAF 346 Query: 352 KGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTW 411 K LFL AG + T D+ K+G L + MP T I LA++ IPPLNGF+S+ + Sbjct: 347 KACLFLVAGIVAHEAATRDIRKLGGLRREMPITFIIACIAGLAMAGIPPLNGFLSKEMFY 406 Query: 412 QSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGA-PRSTHAEEAQEV 470 +S + P + G +K+ F G ++ E Sbjct: 407 ESSIEMGASIGGIFTFLIP---AFAVLGGVFTFAYSIKLIDGIFLGERDKNAIPHHIHEP 463 Query: 471 PNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVT 530 P TM++ LA L +L + S I+ A + A + + Sbjct: 464 PMTMLIPPAFLAFLVILFGVIPSLPTHYIIEPAVSGILLETAHLHVKLWHGFTASLMMTI 523 Query: 531 PSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQ 585 + +L +L+ W + + + A + Q Sbjct: 524 VTFILGILIYTKYDRIAAWQDNFNMKNPRISINYYYDRAVDSAKGNAFRFSSRSQ 578 >UniRef50_Q2RXM5 NADH dehydrogenase (Quinone) n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RXM5_RHORT Length = 674 Score = 379 bits (974), Expect = e-103, Method: Composition-based stats. Identities = 183/686 (26%), Positives = 307/686 (44%), Gaps = 32/686 (4%) Query: 1 MDALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTL 60 M Q+ + + + +L LA ++ + V + + +T L G Sbjct: 1 MSTTQVFLGAFAVLAALPVLTLLAGNRKSLAGSITLVGVGVACLAMLGLAVTALTVGPIA 60 Query: 61 VARFAPPFEFA--DLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFM 118 P L +D LSA V++IS+L +LYS+ Y+ Y + A Sbjct: 61 FDLGTVPLFGLTSSLAFTIDGLSAIFVILISVLGTASALYSVGYIAHYPDEDARRYYVPF 120 Query: 119 NIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIAR-QDKTSINAGMLYFFIAHAGSVL 177 +FIA M+ + + F F +E M+L S+FLV +DK +++AG +YFF+ S+ Sbjct: 121 PLFIAGMLMVATTSDWFCFFFGWEFMTLVSYFLVTFENRDKENLSAGFIYFFMTQLTSMG 180 Query: 178 IMIAFLLMGRESGSLDFASFRT-----LSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLP 232 +M+A +++G GS FA+ + +P + L F GF KAGM PL WLP Sbjct: 181 LMLAIIVLGTWGGSTSFAAVAKTLGALQAENPVALYGLLSLFFIGFATKAGMFPLGIWLP 240 Query: 233 RAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVL 292 +AHPAAP+ SAL+SGVM+K+GI+G+L++ + L WG+++ G +S L+G L Sbjct: 241 KAHPAAPASVSALLSGVMIKLGIYGMLRIFLWALPLGEATHVWGMVITLFGVLSMLVGTL 300 Query: 293 YALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFK 352 AL E D KRLLA ++ +G +LL + + +PL +G LG L+HL+NHA FK Sbjct: 301 RALGEHDCKRLLAQHSIGQMGYVLLGL-GLGLTFLGSNPLFAALGFLGCLYHLINHACFK 359 Query: 353 GLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQ 412 LLF G+I+ R T D++ +G L+ MP TA L+G L+I+ PP NGF+S+W +Q Sbjct: 360 SLLFFNTGSILYRAGTRDLDSLGGLSAVMPLTAGCALVGALSIAGTPPFNGFVSKWLLYQ 419 Query: 413 SLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPN 472 S +A V+ G + + FVK G + G P Sbjct: 420 SAI-----FGDVSTPVYILAAVVAIFIGTVTLASFVKYMGTAYLGTLPKRFVGSGFGCPR 474 Query: 473 TMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPS 532 +M + LA +C+++ + + ++ + + + VT + Sbjct: 475 SMEAVEVFLAVVCLVMGVFPGPVVATLLGVLDPAFAGAGVDLGPSVLSALPWSGLSVTSA 534 Query: 533 -------LLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMA-PSGNGVM 584 L+++ + R W CG ++ + + Sbjct: 535 SGTTLTVFAPLVVIGGLAVSFALSALIHGAVKVPSRPAQIWNCGEEIDDELVRYRASSFY 594 Query: 585 QPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEI 644 P + + + ++R Q PTL L L + D+ + PI + ++ +K I Sbjct: 595 SPFKKLIAPVYR--QHPFPTLSLPALLPRLLD--------LDKWLYFPIGALFRKSSKAI 644 Query: 645 QHLQSGDFRLYCLYVVAALVVLLIAI 670 +G +LY + VA + ++ Sbjct: 645 SRAHTGVPQLYLSWQVAGGALAIVFA 670 >UniRef50_P50939 NADH-quinone oxidoreductase subunit L n=36 Tax=cellular organisms RepID=NUOL_RHOCA Length = 712 Score = 379 bits (974), Expect = e-103, Method: Composition-based stats. Identities = 144/738 (19%), Positives = 251/738 (34%), Gaps = 104/738 (14%) Query: 6 LLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFA 65 + T L+ L +L F L L T L+ + + T Sbjct: 1 MTTIILLAPLLGALIGGFGWRLITEKGALVVTTGLLFLSCILSWVVFLTLPAETQHIHLL 60 Query: 66 PPF----EFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMRE-----YEGKGAAAMGF 116 +R+D L+A M++V++ + + LYS YM + A Sbjct: 61 DWIRSGALDTSWGIRLDRLTAIMLIVVTTVSALVHLYSWGYMAHDENWTHHEAYKARFFA 120 Query: 117 FMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSI-NAGMLYFFIAHAGS 175 +++ F +M+ L+ DN +E + ++S+ L+ K S A + F + G Sbjct: 121 YLSFFTFAMLMLVTSDNLVQMFFGWEGVGVASYLLIGFYYKKPSANAAAIKAFVVNRVGD 180 Query: 176 VLIMIAFLLMGRESGSLDFASFRTLSLSPG------------LASAVFLLAFFGFGAKAG 223 + + + + S+D + A+ + +L F G K+ Sbjct: 181 FGFALGIMGLFFLTDSIDMDVIFASAPELAKTELHFLAWEFNAANLLAVLLFIGAMGKSA 240 Query: 224 MMPLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAI 282 + LH+WLP A P+ SAL + MV G+F + +++ ++V+ + Sbjct: 241 QLFLHTWLPDAM-EGPTPVSALIHAATMVTAGVFLVCRMSPLF----EYAPEAKMMVVYV 295 Query: 283 GAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGAL 342 GA++A L + DIKR++A+ST +G + +A G + + A+ Sbjct: 296 GAVTAFFAATVGLVQNDIKRVIAYSTCSQLGYMFVAAGSGVYSV--------------AM 341 Query: 343 FHLLNHALFKGLLFLGAGAIISRL-HTHDMEKMGALAKRMPWTAAACLIGCLAI--SAIP 399 FHLL HA FK +LFLGAG++I + H DM G L K++P+T A +IG LAI IP Sbjct: 342 FHLLTHAFFKAMLFLGAGSVIHAMHHEQDMRNYGGLRKKIPFTFAIMMIGTLAITGVGIP 401 Query: 400 ---------PLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKM 450 G++S+ +S F+ A +L G+ ++ Sbjct: 402 FFSIGGVPVGFAGYLSKDAIIESAFASGNG----------FAFYVLVAAAGMTSFYSWRL 451 Query: 451 YGITFCGAPRSTHAE--EAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTN 508 +TF G R H + A E P M+ + LLA VL + W +F N Sbjct: 452 IFLTFYGEARGDHHKHDHAHESPAVMLAPLALLAVGSVLAGMV--WYHSFFGDKVASFFN 509 Query: 509 TPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGD---- 564 P A T ++ + + + A + Sbjct: 510 LPAAAHGEAHGTEHATEGHVPEAAMTAEAAHEAAMAGTMAMAEPAAEHAVAKAPQGAIFM 569 Query: 565 -------------------------------AWACGYGWENAMAPSGNGVMQPLRVVFSA 593 AW G + + + L Sbjct: 570 AETNHVIHDAHGVPDWVKLSPFGAMVTGFFFAWLYYIGDKPLPGRTARALPG-LYRFLLN 628 Query: 594 LFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFR 653 + + D D + + + +QSG Sbjct: 629 KWYFDELFDLLFVNPAKSLGRKLWKGGDGAVIDGAINGLALGWIPFFTRVAGRIQSGYLF 688 Query: 654 LYCLYVVAALVVLLIAIA 671 Y +V +V L+ + Sbjct: 689 HYAFAMVLGIVALMFWVV 706 >UniRef50_Q2FZV1 Na(+)/H(+) antiporter subunit A1 n=72 Tax=Bacillales RepID=MNHA1_STAA8 Length = 801 Score = 378 bits (972), Expect = e-103, Method: Composition-based stats. Identities = 137/574 (23%), Positives = 251/574 (43%), Gaps = 20/574 (3%) Query: 4 LQLLTWSLILYLFASLASLFLLGL-DRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVA 62 + LL ++IL L +L L R+ + + + I +++ I +G T++ Sbjct: 1 MSLLHIAVILPLIFALIIPILYRFFKRIHLGWFVLPVPIVIFIYMLTLIKTTMSGNTVMK 60 Query: 63 RFAP-PFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIF 121 P + L +D L L+IS + + LYS+ Y+ + E G ++ +F Sbjct: 61 TLNWMPHFGMNFDLYLDGLGLLFSLLISGIGSLVVLYSIGYLSKSEQLGN--FYCYLLLF 118 Query: 122 IASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTS-INAGMLYFFIAHAGSVLIMI 180 + +M+ +++ DN + +E+ S SS+ L+ +++ + I I G + ++ Sbjct: 119 MGAMLGVVLSDNVIILYLFWELTSFSSFLLISFWRERQASIYGAQKSLIITVFGGLSLLG 178 Query: 181 AFLLMGRESGSLDFASF---RTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPA 237 +L+ + S + + +L G K+ P + WLP A Sbjct: 179 GIILLAIPTQSFSIQYMIQHASEIQNSPFFIFAMILIMIGAFTKSAQFPFYIWLPDAM-E 237 Query: 238 APSHASA-LMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALA 296 AP+ SA L S MVK G++ I ++ A G W V +G I+ L A Sbjct: 238 APTPVSAYLHSATMVKAGLYLIARMTPIFAASQG----WVWTVTLVGLITLFWASLNATK 293 Query: 297 EQDIKRLLAWSTVENVGIIL--LAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGL 354 +QD+K +LA+STV +G+I+ L +G D + A+FHL+NHA FKG Sbjct: 294 QQDLKGILAFSTVSQLGMIMAMLGIGAISYHYQGDDSKIYAAAFTAAIFHLINHATFKGA 353 Query: 355 LFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSL 414 LF+ GA+ T D++K+G L MP + +I L+++ +PP NGF+S+ ++ Sbjct: 354 LFMITGAVDHSTGTRDVKKLGGLLTIMPISFTITVITALSMAGVPPFNGFLSKESFLETT 413 Query: 415 FSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTH-AEEAQEVPNT 473 F+ S+ ++ G + ++ V + +K F G + ++A EV Sbjct: 414 FTASQANLFSVDTLGYLFPIIGIVGSVFTFVYSIKFIMHIFFGQYKPEQLPKKAHEVSIL 473 Query: 474 MIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSL 533 M+++ +LA L ++ L L I+ A + N TV + T S Sbjct: 474 MLLSPAILATLVIVFGLFPGILTNSIIEPATSSIN---HTVIDDVEFHMFHGLTPAFLST 530 Query: 534 LLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWA 567 L++ +L + L+ + +R + T + W Sbjct: 531 LVIYILGILLIVTFSYWVKLLQRQPGKLTFNYWY 564 >UniRef50_Q3AH00 Proton-translocating NADH-quinone oxidoreductase, chain L n=6 Tax=Chroococcales RepID=Q3AH00_SYNSC Length = 669 Score = 378 bits (970), Expect = e-103, Method: Composition-based stats. Identities = 151/722 (20%), Positives = 266/722 (36%), Gaps = 112/722 (15%) Query: 2 DALQLLTWSLILYLFASLASLF--------LLGLDRLAIKLSGITSLVGGVIGIISGITQ 53 A +L +L LF ++ + + L + L + Q Sbjct: 3 SAEELAWLIPVLPLFGAVLTGLGLISFNRTINRLRKPVALLLISCVGAAAALSYSILFNQ 62 Query: 54 LHAGVTLVARFAPPFEF---ADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKG 110 L+ + F + +D L A M+ +++ + ++ +YS YM KG Sbjct: 63 LNGAPPVEHLFVWASAGSFILPMGYVVDPLGAVMLALVTTIALLVLVYSHGYMAHD--KG 120 Query: 111 AAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKT-SINAGMLYFF 169 ++ +F +SM+ L++ N V +E++ + S+ LV D+ + +A F Sbjct: 121 YVRFFTYLALFSSSMLGLIISPNLLEIYVFWELVGMCSYLLVGFWYDRDGAAHAAQKAFV 180 Query: 170 IAHAGSVLIMIAFLLMGRESGSLDFAS--------FRTLSLSPGLASAVFLLAFFGFGAK 221 + G +++ L + +GS DF +++P A + LL F G AK Sbjct: 181 VNRVGDFGLLLGILGLFWATGSFDFQGIADGLQNGLAAGTVAPWAALLLCLLVFMGPMAK 240 Query: 222 AGMMPLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVM 280 + PLH WLP A P+ SAL + MV G+F + ++ ++ Sbjct: 241 SAQFPLHVWLPDAM-EGPTPISALIHAATMVAAGVFLVARLDPLY----AQFPVVQTVIA 295 Query: 281 AIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLG 340 +G I+ LG AL + D+K+ LA+STV +G ++LA+G + Sbjct: 296 VVGTITCFLGASIALTQMDLKKGLAYSTVSQLGYMMLAMGCG--------------APVA 341 Query: 341 ALFHLLNHALFKGLLFLGAGAIISRLHT---------HDMEKMGALAKRMPWTAAACLIG 391 +FHL+ HA FK +LFLG+G++I + DM MG L K+MP T+ IG Sbjct: 342 GIFHLVTHAFFKAMLFLGSGSVIHAMEEVVGHEPVLAQDMRLMGGLRKKMPVTSITFFIG 401 Query: 392 CLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMY 451 C+AIS IPPL GF S+ F+ P+ V+ +T G+ ++Y Sbjct: 402 CIAISGIPPLAGFWSKDEILGQAFNSY-----------PLLWVVGFLTAGMTAFYMFRLY 450 Query: 452 GITFCGAPRS---------------------THAEEAQEVPNTMIVAMLLLAALCVLIAL 490 +TF G R H E M + +LA VLI L Sbjct: 451 FLTFEGEFRGNDTAMQAQLLSAAGKDPSEHHAHGGSVHESAWPMAAPLAVLAVPSVLIGL 510 Query: 491 SASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWL 550 + + + + A S +P + + L + L + Sbjct: 511 LGTPWNSRFAGLLNPEEALEMAEHFSWGEFLPLASASVAISVAGITLAVLAYALRQIDLG 570 Query: 551 WCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKG 610 + R + + L + +G Sbjct: 571 QLVAGRFPAMNA---------------------------FLANKWYLDVVNEKLFV--RG 601 Query: 611 LAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLIAI 670 + + + V+ T + +++L++G + Y L V A ++ L++ Sbjct: 602 SRKLAREVLEVDAKVVDGVVNLTGLLTLGSGEGLKYLETGRAQFYALIVFAGVIGLVVLF 661 Query: 671 AV 672 V Sbjct: 662 GV 663 >UniRef50_Q9K1B0 NADH-quinone oxidoreductase subunit L n=127 Tax=Proteobacteria RepID=NUOL_NEIMB Length = 674 Score = 378 bits (970), Expect = e-103, Method: Composition-based stats. Identities = 137/711 (19%), Positives = 253/711 (35%), Gaps = 90/711 (12%) Query: 1 MDALQLLTWSLILYLFASLAS-LFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAG-- 57 M+ + L ++ L SL + LF + R I + + + G Sbjct: 1 MNDMTLYLIIALVPLAGSLIAGLFGNKIGRAGAHTVTILGVAVSAVLSAYVLWGFIDGSR 60 Query: 58 ----VTLVARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAA 113 + + +D+++A M++V++ + ++ +Y++ YM E G Sbjct: 61 AKFDENVYTWLTMGGLDFSVGFLVDTMTAMMMVVVTGVSLMVHIYTIGYM-HDEKVGYQR 119 Query: 114 MGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKT-SINAGMLYFFIAH 172 ++++F SM+ L++ +N +E + L S+ L+ + + A + F I Sbjct: 120 FFSYISLFTFSMLMLIMSNNFIQLFFGWEAVGLVSYLLIGFYFKRPSATFANLKAFLINR 179 Query: 173 AGSVLIMIAFLL-MGRESGSLDFASFRTLSLSP-------------GLASAVFLLAFFGF 218 G ++ L + GSL + + L + LL F G Sbjct: 180 VGDFGFLLGIGLVLAYFGGSLRYQDVFAYLPNVQNATIQLFPGVEWSLITVTCLLLFVGA 239 Query: 219 GAKAGMMPLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGI 277 K+ PLH WLP + P+ SAL + MV G+F + +++ + Sbjct: 240 MGKSAQFPLHVWLPDSM-EGPTPISALIHAATMVTAGLFMVSRMSPIY----EMSSTALS 294 Query: 278 LVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVG 337 ++M IGAI+AL + + DIKR++A+ST+ +G + +A+G + Sbjct: 295 VIMVIGAITALFMGFLGVIQNDIKRVVAYSTLSQLGYMTVALGAS--------------A 340 Query: 338 LLGALFHLLNHALFKGLLFLGAGAIISRLHT-HDMEKMGALAKRMPWTAAACLIGCLAIS 396 A+FH++ HA FK LLFL AG+ I +H DM MG L K MP T LIG L++ Sbjct: 341 YSVAMFHVMTHAFFKALLFLAAGSAIIGMHHDQDMRHMGNLKKYMPVTWLTMLIGNLSLI 400 Query: 397 AIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFC 456 P +GF S+ ++ + A + + + + Y + F Sbjct: 401 GTPFFSGFYSKDSIIEAA-------KYSTLPGSGFAYFAVLASVFVTAFYAFRQYFMVFH 453 Query: 457 GAPRS------------------THAEEAQEVPNTMIVAMLLLAALCVLIALSA--SWLA 496 G + + E P + + ++LLA V+I A L Sbjct: 454 GEEKWRSLPEHHSDGHGEEHHGLGKNDNPHESPLVVTLPLILLAVPSVIIGYIAIEPMLY 513 Query: 497 PKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRR 556 T+ G +L LA+ + + L+ + Sbjct: 514 GDFFKDVIFVNADAHPTIHIMKEEFHGALAMVSHSLHSPVLYLAIAGVLSAWLLYVKLPH 573 Query: 557 AAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTA 616 + +P+ V+F + L Sbjct: 574 LPAKIAQT-------------------FRPIYVLFENKYYLDALYFNVFAKGTRALGTFF 614 Query: 617 RAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLL 667 D ++ +A +++ Q+G Y +V ++VLL Sbjct: 615 WKVGDTAIIDNGIVNGSAKLVGAIAAQVRKAQTGFIYTYAAAMVFGVLVLL 665 >UniRef50_D2BHY2 NADH:quinone oxidoreductase subunit 5 (Chain L) n=5 Tax=Dehalococcoides RepID=D2BHY2_DEHSV Length = 654 Score = 377 bits (969), Expect = e-103, Method: Composition-based stats. Identities = 154/688 (22%), Positives = 265/688 (38%), Gaps = 52/688 (7%) Query: 1 MDALQLLTWSLILYLFASLASL---FLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAG 57 M L L+ + +L ++ F L+ L ++ I L Sbjct: 1 MTQTGLWLIMLLPLICGALIAMGYAFFCKKPALSGYLGIAGVGGSLLLSIWGLTGLLGKE 60 Query: 58 VTLVARFAPPFEFAD------LTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGA 111 + L L D L+ M VI + ++ +YS YM + KG Sbjct: 61 GVSHYASGFSWFSIGNSVDISLNLNFDPLAGIMCFVILFVSLMVHIYSQGYM--HGDKGY 118 Query: 112 AAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLY-FFI 170 F++ F ASM+ L++ DN + +E++ L+S+ L+ + + F + Sbjct: 119 PRYYAFLSFFTASMLGLVLSDNLLFTFFFWELVGLASYLLIGFWFTRPAAANAAKKAFIV 178 Query: 171 AHAGSVLIMIAFLLMGRESGSLDFASFRTLS----LSPGLASAVFLLAFFGFGAKAGMMP 226 G V + A L++ +G+LD S ++ + G + L F G K+ P Sbjct: 179 TRIGDVGFLAAILILFANTGTLDINSLNGMAEMGFIGAGTVTVAALGIFAGAVGKSAQFP 238 Query: 227 LHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAI 285 LH WLP A P+ SAL + MV G+F + + + LW V IGA+ Sbjct: 239 LHVWLPDAM-EGPTPVSALIHAATMVAAGVFLVARTYPIFESSATAMLW----VSIIGAV 293 Query: 286 SALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHL 345 +A+ AL D+KR+LA+STV +G ++L +G G+ +FHL Sbjct: 294 TAIFAATMALVMNDMKRILAYSTVSQLGYMMLGLGTG--------------GIAIGIFHL 339 Query: 346 LNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFI 405 NHA FK LLFLG+G++ T D+ +MG L+K MP T+ LI L+++ I PL+GF Sbjct: 340 FNHAFFKSLLFLGSGSVNHATGTFDIREMGGLSKPMPVTSKTFLIASLSLAGIWPLSGFF 399 Query: 406 SEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAE 465 S+ I ++ +T L ++Y + F G R Sbjct: 400 SKDEILAGAMD-----------GQVILFILALITVFLTAFYMFRLYFVAFGGTYRGKG-- 446 Query: 466 EAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTF 525 E P M +L+L V+ L + +T GI L P Sbjct: 447 HPHESPKVMSWPLLILVVPSVISGLLNA--GGSFSGFLGEEVHTGFFEGLFGILLHPLAL 504 Query: 526 HTQVTPSLLLLLLLAMPLLPGLYWLWCRSR-RAAFRRTGDAWACGYGWENAMAPSGNGVM 584 + + L M L R + + + +E ++ + Sbjct: 505 VSLAVAGGGIYLAFLMYKKKSLSPAVFSERFKWLYMIFSKKYWMDELYEGVISRTLLMKG 564 Query: 585 QPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEI 644 F + L+ + + +R ++ + + + + + T K Sbjct: 565 LFAFAAFFDKKVVDGGLNGFFIQKVLFSRLFSRFRTADERIVDGAVNGVAAITVESGKVG 624 Query: 645 QHLQSGDFRLYCLYVVAALVVLLIAIAV 672 + Q+G + Y +Y+ A +VVL++A + Sbjct: 625 RKAQTGQLQSYGIYLAAGVVVLVMAALI 652 >UniRef50_B5YKQ9 Hydrogenase 4, component B or formate hydrogen lyase, subunit 3, putative n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YKQ9_THEYD Length = 686 Score = 377 bits (969), Expect = e-103, Method: Composition-based stats. Identities = 146/674 (21%), Positives = 296/674 (43%), Gaps = 17/674 (2%) Query: 12 ILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAP--PFE 69 L L + + + + ++ I + + + + P Sbjct: 8 FLALISGMVLTSFIKNKNFSGFITLIMMIFSSFCIFYFSLDVIIENKFIEQEIFSLKPLL 67 Query: 70 FADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALL 129 + T+ +DSLSA +L+ISL+ SL+S Y+ Y+ F+ + + + ++ Sbjct: 68 NSSFTISIDSLSALFLLIISLVSFCVSLFSWKYLDVYKTNSPKRFYPFLILLFIASIGVV 127 Query: 130 VMDNAFWFIVLFEMMSLSSWFLVIARQDKT-SINAGMLYFFIAHAGSVLIMIAFLLMGRE 188 + + +FIV +E+M+LSSWFLVI ++K ++ G+ YF H + +++A +++ Sbjct: 128 SVKDFLFFIVFWELMTLSSWFLVIFEREKKSALKGGLQYFIATHVTTAFLILASVILYSY 187 Query: 189 SGSLDFASFRT-----LSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHAS 243 S F + P L+ + F F KAG++P WLP +P PS AS Sbjct: 188 SNDFSFKEINKSFSLIIKNQPYLSHFILFCIFIAFVTKAGVLPFGFWLPNTYPQPPSSAS 247 Query: 244 ALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRL 303 + GVM K+ ++ + + ++ + WG ++ + G S +G + AL + + KRL Sbjct: 248 SFFGGVMSKLAVYALFRFFCSVIPFSFHTQIWGFIIASFGVFSIFVGTIAALTQDEAKRL 307 Query: 304 LAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAII 363 +++ + VG + L +GV + + + +P L + L+G LFH+ N++++K LLFL AG+I Sbjct: 308 MSFHAIGQVGYMFLGIGVGLYFIRI-NPFLASIALVGGLFHVFNNSIYKSLLFLNAGSIF 366 Query: 364 SRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAV 423 + T D+ K+ L K MP TA LIG L+I+ +PP NGFIS+ ++S ++ V Sbjct: 367 YKTGTTDLNKVSGLMKVMPLTAITALIGSLSIAGVPPFNGFISKLLIFESSIWSAKQSEV 426 Query: 424 A--LQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLL 481 ++ A + ++ + + F+K F G + T E+ + +P +M+++ ++L Sbjct: 427 FFLIRGAFIVFGIISVFISAVTLASFLKFVNSAFMGKLQGTIDEK-RNLPWSMVLSQIIL 485 Query: 482 AALCVLIALSA----SWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLL 537 A +C+L L + ++ + + V + + + + + Sbjct: 486 AFICLLAGLFPFIPLKIIYNAVIASSGSLPKFSSVFVGNMLGVGINFVENYSQGAWFPIF 545 Query: 538 LLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWEN-AMAPSGNGVMQPLRVVFSALFR 596 ++ ++ + A +R + W G + G+ QP + + S Sbjct: 546 IMIPLIILTILIFSFERYAKAPKRDVETWYGGKEHAPEEVVYKGHSFYQPFKDLVSFKIG 605 Query: 597 LRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYC 656 Q + + DE + PIV + + + + + Y Sbjct: 606 KIQFKGFYPVGIPAIKFSVPESFLKILRVDEWLYYPIVDKLTKFFEFLAQIYNSITEKYI 665 Query: 657 LYVVAALVVLLIAI 670 ++++ + + I + Sbjct: 666 IWLIFGSIFIFILL 679 >UniRef50_Q1H3T5 NADH dehydrogenase (Quinone) n=12 Tax=Proteobacteria RepID=Q1H3T5_METFK Length = 966 Score = 376 bits (966), Expect = e-102, Method: Composition-based stats. Identities = 122/540 (22%), Positives = 228/540 (42%), Gaps = 30/540 (5%) Query: 7 LTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAP 66 L + ++ ++ + L R + I S + + + Q G T++ R P Sbjct: 3 LAYLTLIPFIGAIFTKLSTRLGRYSSAWVAILSAMLSLFLLWPLAMQAWQGNTVIQRITP 62 Query: 67 PFEFADLT--LRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIAS 124 ++ R+D LS L+I L+ ++ +Y+ Y+ ++ +F+ S Sbjct: 63 WMPELGISLAFRLDGLSLLFSLMILLVGLIVVIYARYYLS--PRDSMGRFYSYLLLFMGS 120 Query: 125 MVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDK-TSINAGMLYFFIAHAGSVLIMIAFL 183 M+ +++ +N ++ +E+ SLSS+ L+ Q + + + I G + ++ FL Sbjct: 121 MLGVVLSENIIQLLMFWELTSLSSFLLISYWQQREEASRGARMALTITGGGGLAMLGGFL 180 Query: 184 LMGRESGSLDFASF---RTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPS 240 L+G +GS D + S + LL G K+ P H WLP A AAP+ Sbjct: 181 LLGNMAGSYDLSDILLAGDAIRSHEHYPLMLLLILLGVFTKSAQFPFHFWLPNAM-AAPT 239 Query: 241 HASA-LMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQD 299 SA L S MVK GIF + + L W +V +G + + G AL + D Sbjct: 240 PVSAYLHSATMVKAGIFLLAR----LFPALSGTPEWTWIVSGVGIATFVTGSYIALFKHD 295 Query: 300 IKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGA 359 +K LLA+ST+ ++G+I+ G+ T + ++ +FH++NHA FK LF+ A Sbjct: 296 MKALLAYSTISHLGLIVALFGIG-----------TPLAVVAGIFHIINHATFKASLFMLA 344 Query: 360 GAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSR 419 G + T D+ +G L + MP++A +I A++ IP LNGFIS+ + + Sbjct: 345 GIVDHETGTRDIRHLGGLRRYMPYSAVLMVIAAAAMAGIPGLNGFISKEMFLDQIVAHGN 404 Query: 420 VEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAML 479 + ++ + +++ F G+ + + + M + + Sbjct: 405 TFP-----HQWLLPAIVTAGAVFSAAYSIRIAHSVFFGSEPDDLPKAPHDPSSGMQIPVA 459 Query: 480 LLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLL 539 +L A CV + + + P + + + T P I +L +L+ Sbjct: 460 ILVAACVAVGVLPAIAEPLVTLVTASTLQTAPPAFHLAIWHGLTPALWMSAIALAGGILV 519 >UniRef50_Q5FC98 NADH-quinone oxidoreductase chain L n=18 Tax=Rickettsiales RepID=Q5FC98_EHRRW Length = 641 Score = 376 bits (965), Expect = e-102, Method: Composition-based stats. Identities = 131/685 (19%), Positives = 255/685 (37%), Gaps = 85/685 (12%) Query: 3 ALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVA 62 +++ ++L L S+ + + + + + + Q + L + Sbjct: 20 MIKIELLCVLLPLIGSVFANIISHRFFAQLCAVFFITSSSLLSWYLFFNFQNSYIIDLFS 79 Query: 63 RFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFI 122 +L +DSLS M+++++ + VV +YS+ YM G AA ++++F Sbjct: 80 WIQVYDLKIHWSLYLDSLSIIMLVIVNTVSVVVHIYSIGYMSHDVG--AARFLSYLSLFT 137 Query: 123 ASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKT-SINAGMLYFFIAHAGSVLIMIA 181 M+ L+ N + +E + L S+ L+ +K+ + A M F I G ++ Sbjct: 138 FFMLILVTSGNFLQLFLGWEGVGLCSYLLIGFWFEKSSATKAAMKAFIINRVGDFFFILG 197 Query: 182 FLLMGRESGSLDFASFRTLSLSP--------------GLASAVFLLAFFGFGAKAGMMPL 227 + + SLDFA ++ + +L F G K+ + L Sbjct: 198 IIAVFLVFDSLDFARVFHSIVNSDYRIGIINFFGYQVPYIDVICVLLFIGCMGKSAQIGL 257 Query: 228 HSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAIS 286 H+WLP A P+ ASAL + MV G+F +++ + L ++ +G I+ Sbjct: 258 HTWLPDAM-EGPTPASALIHAATMVTAGVFLVVRCSPLF----ELSDVARHFILIVGTIT 312 Query: 287 ALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLL 346 L A+ + D+K+++A+ST +G + LA G++ A+FHL+ Sbjct: 313 CLFAATIAIVQTDLKKIIAYSTCSQLGYMFLACGLS--------------AYSVAIFHLM 358 Query: 347 NHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFIS 406 HA FK LLFL AG II H D+ K+ A +++P+T IG LA++ I P GF S Sbjct: 359 THAFFKALLFLCAGNIIHSTHEQDIYKIRASWRQIPFTYVLTWIGSLALAGIFPFAGFYS 418 Query: 407 EWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEE 466 + +S +++S A ++ + L ++ I F G + + Sbjct: 419 KDLIIESSYNVSNT-----------AFIISNIVAFLTAFYSWRLIIIVFHG--IDSEKKS 465 Query: 467 AQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFH 526 E M++ +L+L+ + + G + Sbjct: 466 IFESGKVMLLPLLVLSVGSIFSGMW-----------GEKVLLINDHIFWKGSLTIHTHED 514 Query: 527 TQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQP 586 + LL L+L + ++ C Y + + Sbjct: 515 VGLLIKLLPLVLSVLGIV-----------------------CAYLRYYFNYFTFFKFHR- 550 Query: 587 LRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQH 646 L + + + + L + D + I L+K Sbjct: 551 LTEFLYKKWYIDELYYYVFVIPIKLIADFFSQIIDKKVIDYFGLGGITRTVNSLSKGSVK 610 Query: 647 LQSGDFRLYCLYVVAALVVLLIAIA 671 +Q+G Y ++ L+ +++ + Sbjct: 611 IQTGFIFDYAFVMLLGLISIVMWLI 635 >UniRef50_C2FWK2 Possible NADH dehydrogenase (Quinone) n=2 Tax=Sphingobacterium spiritivorum RepID=C2FWK2_9SPHI Length = 679 Score = 375 bits (964), Expect = e-102, Method: Composition-based stats. Identities = 131/703 (18%), Positives = 260/703 (36%), Gaps = 75/703 (10%) Query: 8 TWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLH--AGVTLVARFA 65 + FA+ LLG + + I + + G+++ + + F Sbjct: 13 ALLTLALPFAAFLYQALLGKRAQSGIIPAIAIALSALFGLLTFVEIWNYRTVHIQTDWFT 72 Query: 66 PPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASM 125 + + + +++L+A M+L++ ++ + LYS +YM + KG ++++F +M Sbjct: 73 IGNKTFTVGILLNNLTALMLLIVPVIALPVHLYSRSYM--HGDKGIHRYWMYLSLFCFAM 130 Query: 126 VALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKT-SINAGMLYFFIAHAGSVLIMIAFLL 184 + L++M+N + +E++ +S+ L+ K + A F I G + + + Sbjct: 131 LGLVMMNNLLLMYIFWELVGFASYLLIGFWFTKESAAQANKKAFIINRIGDLGFLTGIAI 190 Query: 185 MGRESGSLDFASF--------------------RTLSLSPGLASAVFLLAFFGFGAKAGM 224 + + G+L+ ++ G +A + F G AK+ Sbjct: 191 VYSQFGTLNLVELFGSDGLAYQAILSDGQWISPMNNTMPAGWLTAAGIAFFIGAMAKSAQ 250 Query: 225 MPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGA 284 PLH WLP A S +S + + MV G+F + + +++ IG Sbjct: 251 FPLHVWLPDAMEGPTSVSSLIHAATMVAAGVFLMATLFPLF------NETVLLVIAVIGT 304 Query: 285 ISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFH 344 ++A +ALA+ DIKR+LA+ST+ +G +++ +G+ A+FH Sbjct: 305 LTAASAAYFALAQYDIKRILAFSTISQLGYMMVGIGIG--------------AWDAAIFH 350 Query: 345 LLNHALFKGLLFLGAGAIISRL-----------HTHDMEKMGALAKRMPWTAAACLIGCL 393 L H FK LLFL AGA+I + D+ MG L K MP T A + L Sbjct: 351 LATHVFFKCLLFLCAGAVIHEMVHLKEKSQQDFDAQDLRNMGGLRKYMPKTFALMALSSL 410 Query: 394 AISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGI 453 A+S P +G++S+ S F S I V+L V L ++ Sbjct: 411 ALSGFPLTSGYLSKDSIVISAFEWSSTHGAVYH----IIPVVLIVVSILTAFYIGRLIFK 466 Query: 454 TFCGAPR--STHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPP 511 F G R S+ E P M++ M LA C + + + + Sbjct: 467 AFFGQLRVPSSLTAPMHEAPKMMLIPMFFLALWC----FFPIFSFNPLSYHHAWIVD--- 519 Query: 512 ATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYG 571 + P + + ++L L + + W F Sbjct: 520 ----GLLDQYPYATNPLAHLVIPVILTLGALGSWWVGYKWYVKNEYPFNPQHRLIQASLK 575 Query: 572 WENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLR--LNKGLAHVTARAQSTEPFWDERV 629 + + + + + + + ++ + +A + + Sbjct: 576 QGYLNELYTFVFVNGTVKLAKICYWIDRNIVDGIVHLISIVILRFSAVINWIDRVLVDGF 635 Query: 630 IRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLIAIAV 672 + + L +H+Q+G + Y V +++ L+ + + Sbjct: 636 VNLVAKTAYWLGNVFRHIQNGRLQYYLFSVFFVVLIGLVYLII 678 >UniRef50_C6MX91 NADH dehydrogenase (Quinone) n=1 Tax=Geobacter sp. M18 RepID=C6MX91_9DELT Length = 657 Score = 375 bits (964), Expect = e-102, Method: Composition-based stats. Identities = 214/671 (31%), Positives = 342/671 (50%), Gaps = 24/671 (3%) Query: 2 DALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLV 61 D L+ ++ L + L L L L +L+ + +L ++ + S + L +G Sbjct: 8 DPASLVLCAIALAGCSGLPGLVLRR-GSLGQRLASVAALTSSLLALPSLLYLLLSGGEAS 66 Query: 62 ARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIF 121 F + +D LS F ++ I L+ SLY+L Y ++ FF + Sbjct: 67 FTLNWNLPFGPCEVALDPLSLFFLIPIFLVFPAGSLYALGYWPAASHSSEKSVTFFYGLL 126 Query: 122 IASMVALLVMDNAFWFIVLFEMMSLSSWFL-VIARQDKTSINAGMLYFFIAHAGSVLIMI 180 +M ++V N F++ +E M+LS +FL + ++ +AG++Y +H G +++ Sbjct: 127 AFAMALVVVARNGALFMMAWETMALSGYFLLIAEHREGEVRSAGLVYLVASHLGGAALLL 186 Query: 181 AFLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPS 240 F + R +G F + +L+L+ GLA +F LA GFG+KAG+MPLH WLP AH APS Sbjct: 187 LFASLFRITGGFGFPAAHSLALAAGLAGTIFALALAGFGSKAGLMPLHLWLPSAHANAPS 246 Query: 241 HASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDI 300 H SAL+SGVM+KIG++GIL+V PLWWG L+ A G SA++G+ A A++DI Sbjct: 247 HVSALLSGVMLKIGVYGILRVISFF---PERPLWWGALLTAAGLTSAVMGICVASAQKDI 303 Query: 301 KRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAG 360 KRLLA+S++EN+GI+ +G+ ++G + L +GL GALFH+LNHA+FK LLF AG Sbjct: 304 KRLLAYSSIENLGIVTTGIGMFLLGQGTGNHRLAFLGLAGALFHVLNHAIFKPLLFFCAG 363 Query: 361 AIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRV 420 +++ T D+++MG LA+R+P+TA L G +AI +PP NGF SE + F +R Sbjct: 364 SVMHATGTRDLDRMGGLARRLPFTAFFALCGAVAICGLPPFNGFASEMLLYLGFFGEARA 423 Query: 421 EAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLL 480 L L P+ ++ GG+AV+ FVK+YGI F GAPR+ A E +M+ + L Sbjct: 424 GQPYLALGAPVLAMV----GGVAVLSFVKLYGIAFLGAPRTEAAAHGHEATGSMLAPISL 479 Query: 481 LAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLA 540 LA L +L L + V P + + Sbjct: 480 LAFLALLGGLFPQLFLALVQPALRQLAPDAAHFGT-----------LPVQPFWFAVAGGS 528 Query: 541 MPLLPGLYWLWCRSRRAAFRRTGDAWACGYG-WENAMAPSGNGVMQPLRVVFSALFRLRQ 599 + L L +L+ + + +G W CGY + +G+ + AL R R Sbjct: 529 VICLALLLFLFLQRKVKGHASSGPTWGCGYLCPSPRIQYTGSSFGAFFSSLSGALIRTRI 588 Query: 600 QLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYV 659 LDP L A ++ + E R++ P+++ ++ LQ G+ ++Y LY+ Sbjct: 589 TLDPVTGLAPAAARMSY---APEETLLHRLVLPVLNIAGIACAFVRRLQHGEVQIYILYI 645 Query: 660 VAALVVLLIAI 670 L++LL+ + Sbjct: 646 FVTLMLLLLWV 656 >UniRef50_C6D5D4 Proton-translocating NADH-quinone oxidoreductase, chain L n=82 Tax=Bacillales RepID=C6D5D4_PAESJ Length = 625 Score = 375 bits (964), Expect = e-102, Method: Composition-based stats. Identities = 145/689 (21%), Positives = 269/689 (39%), Gaps = 87/689 (12%) Query: 1 MDALQLLTWSLILYLFASLASL-FLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVT 59 MD L W + L+ FAS L L RLA L G + ++ + + Sbjct: 1 MDQLTKAAWLIPLFPFASFLLLTALGRSYRLAGVLIGSIGSLASLVMSLLVFIERLGPNA 60 Query: 60 LVA------RFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAA 113 + + + +L+A M+++++++ + ++YS YM++ E Sbjct: 61 VDYSGDSYKWIGLGEYTLKIGFEITNLNALMLVIVTVVSFLVNVYSAGYMKKDE--RITV 118 Query: 114 MGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLY-FFIAH 172 ++ +F +M+ L++ DN F + +E++ + S+ LV K + A F + Sbjct: 119 FYGYVALFTFAMLGLVLSDNMLVFYMFWELVGVCSFLLVGFWYAKPAARAAAKKAFIVTR 178 Query: 173 AGSVLIMIAFLLMGRE--SGSLDFASFRTLSLSP-------GLASAVFLLAFFGFGAKAG 223 G +++ +++ +LDF+S + + +++ LL F G K+G Sbjct: 179 IGDAGLLLGIIVLFWYMPGHALDFSSIHNVFTEGQSGTITMTITTSIALLLFMGVIGKSG 238 Query: 224 MMPLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAI 282 PLH WLP A P+ SAL + MV G+F + + A V Sbjct: 239 QFPLHVWLPDAM-EGPTPISALIHAATMVAAGVFLLARTFDIFEASASAM----HTVAYF 293 Query: 283 GAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGAL 342 G +A+ ALA+ DIKR+LA+ST+ +G +++A+G+ + G + Sbjct: 294 GGFTAIFAATVALAQNDIKRILAYSTISQLGYMVMAMGLG--------------SMTGGV 339 Query: 343 FHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLN 402 FHL HA FK LLFL AG++I +HT ++ +MG L +M TA IG L++S IPP + Sbjct: 340 FHLFTHAFFKALLFLAAGSVIHAVHTQNIHEMGGLGSKMRITAWTFAIGALSLSGIPPFS 399 Query: 403 GFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRST 462 GF S+ S + P + + +++ I F G R Sbjct: 400 GFWSKDAILASALDEN-----------PFLFAVGLAAAFCTALYMSRLFFIVFMGKSRLQ 448 Query: 463 HAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVP 522 E +E M + +L+LA + V + + G L Sbjct: 449 QPAEVKESSKVMTIPLLVLAVISVGAGFIETPWNGWL-----------------GSWLTD 491 Query: 523 GTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNG 582 G + + ++ + L + WL YG + + Sbjct: 492 GAEEVHASGAAIVASIAVGVLGIYVGWLM------------------YGKGSIERGAAAA 533 Query: 583 VMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAK 642 M L + + + + + + + + + + +R + + Sbjct: 534 KMPWLVNLLERQYYVNEFYNAVIVNSVRALGKG--LNAFDEYVIGGAVRLVGFTAGAGGR 591 Query: 643 EIQHLQSGDFRLYCLYVVAALVVLLIAIA 671 + L +G + Y L + L+V++ AI Sbjct: 592 VLTRLNNGQTQTYGLTAIIGLIVIIAAIV 620 >UniRef50_B4RCL7 NADH dehydrogenase I, L subunit n=9 Tax=Proteobacteria RepID=B4RCL7_PHEZH Length = 738 Score = 374 bits (961), Expect = e-102, Method: Composition-based stats. Identities = 146/759 (19%), Positives = 248/759 (32%), Gaps = 116/759 (15%) Query: 1 MDALQLLTWSLILYLFASLASLFLLGL--DRLAIKLSGITSLVGGVIGIISGITQLHAGV 58 MD L++ L L ++ + +++ ++ + + + G+ Sbjct: 1 MDPKVLVSIILFGPLVGAIVAGLFGRAIPSKVSQAVTTGLLFLSAALSWVVFGQWTWGGL 60 Query: 59 TLVARFAPPFEFAD-----LTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAA 113 PF + R+D LSA M++V++ + + LYS YM E K Sbjct: 61 EPFTLTYAPFIHVGDFVSNWSFRLDGLSAVMLVVVTSVSSLVHLYSWGYMAEDPHK--PR 118 Query: 114 MGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAG-MLYFFIAH 172 ++++F +M+AL+ + +E + L+S+ L+ K + NA + F + Sbjct: 119 FFAYLSLFTFAMLALISAADFMQLFFGWEGVGLASYLLIGFWFKKPTANAASIKAFVVNR 178 Query: 173 AGSVLIMIAFLLMGRESGSLDFASFRTLSLSPG------------LASAVFLLAFFGFGA 220 G + + + GS+ FA + L L F G Sbjct: 179 VGDFGFALGIMTVFWAFGSIQFAEIFPQMQAAAGRAWSFIGYDWNLVDLACALLFVGAMG 238 Query: 221 KAGMMPLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILV 279 K+ LH+WLP A P+ SAL + MV G++ + ++ +V Sbjct: 239 KSAQFFLHTWLPDAM-EGPTPVSALIHAATMVTAGVYMVCLLSPMF----EYAPVAKNIV 293 Query: 280 MAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLL 339 IGA++AL L + DIKR++A+ST +G + A GV Sbjct: 294 TVIGAVTALFAATVGLTQNDIKRVIAYSTCSQLGYMFFAAGVG--------------AYQ 339 Query: 340 GALFHLLNHALFKGLLFLGAGAIISRL-HTHDMEKMGALAKRMPWTAAACLIGCLAI--S 396 A+FHL HA FK LLFLGAG++I + H DM + G L K +P T A IG +AI Sbjct: 340 AAMFHLFTHAFFKALLFLGAGSVIHGMAHEQDMRRYGGLVKYLPVTYAVMTIGTIAITGL 399 Query: 397 AIP----PLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYG 452 IP GF S+ + + G A V+ GL ++ Sbjct: 400 GIPGVELGFAGFYSKDAIIHAAYEAGGAGHP----MGYFAFVIGIFVAGLTAFYSWRLAF 455 Query: 453 ITFCGAPRSTHAE----------------------------------------------- 465 TF G+ R T + Sbjct: 456 FTFNGSARWTSEDLEHHWHNRDHAHDGHDDHATAAQIETHDEPLADDAGHGHGHGHGHGP 515 Query: 466 -EAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGT 524 E P +M + ++LLA V ++ + I F Sbjct: 516 HLPHESPWSMRLPLILLAIGAVFAGIA--FHHQFIGDHKAEFWKGAIYNAPVEAHAAAPA 573 Query: 525 FHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVM 584 H + +A + + A T WA + + + Sbjct: 574 AHAEAAADHAAASEVASTAAGPMPGEDHDTAEAHHAPTWVIWAPLVASVLGLLVAAYMYL 633 Query: 585 -------------QPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIR 631 PL F + + D + D Sbjct: 634 LKEGLGARLAARGGPLYTFFYNKWFFDELYDAVFVRGAKFLGDLFWKGGDQKIIDGLGPD 693 Query: 632 PIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLIAI 670 + + + ++ K LQ+G Y ++ + LL Sbjct: 694 GVSALSVQVGKGAGRLQTGYVYHYAFVMLLGVAGLLTYA 732 >UniRef50_Q0C1D3 NADH-quinone oxidoreductase, L subunit n=4 Tax=cellular organisms RepID=Q0C1D3_HYPNA Length = 716 Score = 374 bits (961), Expect = e-102, Method: Composition-based stats. Identities = 144/757 (19%), Positives = 255/757 (33%), Gaps = 136/757 (17%) Query: 1 MDALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGV-- 58 M LL + ++ A+L LF + + L +++ + + AG+ Sbjct: 1 MLPDSLLLFIVLAPGIAALFGLFHKVVGDRTVMLVTTGTVLTAGALSLFQLFAYVAGLGH 60 Query: 59 --------------------------TLVARFAPPFEFADL----TLRMDSLSAFMVLVI 88 + P E + +R+D+LS M+ VI Sbjct: 61 VGAPEAHAAVDAYLTAGPAHSTQELKQHIITLMPWIEVGNFKANWAIRVDALSIVMMAVI 120 Query: 89 SLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSS 148 + + + LYS YM E K ++++F M+ L+V DN +E + L+S Sbjct: 121 TGVSGLVHLYSWGYMSEEPHKS--RFFAYLSLFTFMMLMLVVADNFIQLFFGWEGVGLAS 178 Query: 149 WFLVIARQDKTS-INAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRTLSLSPGLA 207 + L+ K + +A + F G + + + + GS++F + + Sbjct: 179 YLLIGFWYTKKAPNDASIKAFVTNRVGDFGLALGIMAVFFVFGSVEFGPVLDAIRTNAIV 238 Query: 208 S--------------------------AVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSH 241 + + +L F G K+ LH WLP A P+ Sbjct: 239 TPVAFAEAAPAREAVIMFLGQRVYALELIGILLFIGAMGKSAQFFLHVWLPDAM-EGPTP 297 Query: 242 ASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDI 300 SAL + MV G++ + + + ++ +GA++AL +A+ DI Sbjct: 298 VSALIHAATMVTAGVYLVC----LVSPIYEYTFYAAGMIALVGAVTALYAATVGMAQNDI 353 Query: 301 KRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAG 360 KR++A+ST +G + A GV A+FHL HA FK LLFLGAG Sbjct: 354 KRVIAYSTCSQLGYMFFAAGVG--------------AYEAAMFHLFTHAFFKALLFLGAG 399 Query: 361 AIISRL-HTHDMEKMGALAKRMPWTAAACLIGCLAIS--AIP----PLNGFISEWYTWQS 413 ++I + H DM +MG LAK MP T AA +IG +AI IP +GF S+ +S Sbjct: 400 SVIHGMHHEQDMRRMGGLAKFMPLTYAAMMIGTIAIIGLGIPHTKLGFSGFFSKDAILES 459 Query: 414 LFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGA--------------- 458 F+ + + Q+A + L ++ +TF G Sbjct: 460 AFAGGTAQVMFGQMAFWF----GLLAAFLTSFYSWRLIYMTFHGPRVVLEDHGHDHAHAD 515 Query: 459 -----PRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPAT 513 H E P M++ + LL+ V + + Sbjct: 516 EHAEDDHHGHDHTPHESPMVMLIPLALLSLGAVFAGFY---FYDAFVEANNEAFWAGAIY 572 Query: 514 VASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWE 573 A+ ++ + L++ + A Sbjct: 573 RATENHVLHDRHNVPEWVLWAPLVVTIAGFALASMTYFFNRGVGARIAAS---------- 622 Query: 574 NAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPI 633 PL +FS + + TL + D + Sbjct: 623 ----------GGPLHSLFSNKWYFDEIYQATLVRGSAFLGNIFWKA-DKKIIDGAGPDGM 671 Query: 634 VSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLIAI 670 + A+ + + +G Y ++ A +V + Sbjct: 672 AALAGIGARRLAKMHTGYLYHYAFVIIGAAIVFGAIL 708 >UniRef50_A6TVL4 NADH dehydrogenase (Quinone) n=2 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TVL4_ALKMQ Length = 694 Score = 374 bits (960), Expect = e-102, Method: Composition-based stats. Identities = 141/561 (25%), Positives = 264/561 (47%), Gaps = 27/561 (4%) Query: 6 LLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFA 65 L +++ L ++ ++ + + ++ +++ Q+ G Sbjct: 89 LPLLVIMIPLVGGPIEAYIGKKSENLRDMAVVDTTFVTLLLVLAMYPQVAQGEMYYH--L 146 Query: 66 PPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASM 125 P L+ ++D LS M +L + S+Y+ YM + +M++ + Sbjct: 147 PKLLGYGLSFKVDMLSFIMAATAGVLWFLVSIYAHDYMGIENHRN--RFYLWMSVTFGGI 204 Query: 126 VALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLM 185 + ++ + F + FE+M+ SS+FLV Q K SI AG Y ++ AG + I++ +L+ Sbjct: 205 LGTVMAGDLFTMFLFFEIMTFSSYFLVAHNQSKESILAGNSYIYMGVAGGLSILLGMILL 264 Query: 186 GRESGSLDFASFRTLSLSPGLA-SAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASA 244 +G+L+F + G + L GFG KAGM+PLH WLP+AHP AP+ ASA Sbjct: 265 YAYTGTLEFIPLASEIKDLGWVKYLMTGLFVGGFGIKAGMLPLHIWLPKAHPVAPTPASA 324 Query: 245 LMSGVMVKIGIFGILKVAMDLLAQT------------GLPLWWGILVMAIGAISALLGVL 292 L+SG+++K+G +GIL+V++ + + G +++ IG I+ ++GV Sbjct: 325 LLSGILIKVGAYGILRVSISFFVPSITEISGYADSLWEVSQKLGAVIIWIGIITMVVGVF 384 Query: 293 YALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFK 352 AL + ++K++LA+ ++ +G I++ +GVA +G G ++H++NHALFK Sbjct: 385 MALQQSNMKKMLAYHSISQMGYIVMGIGVATYLGYKG-----AMGFSGGIYHMVNHALFK 439 Query: 353 GLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQ 412 LLF+ G + R H DM K+G + ++MP+TA C+I L I+ +P NGF S+ Sbjct: 440 ALLFMVVGLVYLRTHELDMYKLGGMWRKMPFTAFLCIIAALGITGMPGFNGFASKSILHH 499 Query: 413 SLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPN 472 ++ + + A I V+ V F+K++ F G + + E Sbjct: 500 AIIEAYEYGHPSFRYAEMIFTVV----SAGTVCSFIKLFSFVFLGKCPEKYKDIEGEKG- 554 Query: 473 TMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPS 532 M +AM LA + + + +++ K + A PA + + + +T Sbjct: 555 MMDLAMGGLALMIIAVGQVPNFMMDKFIIPAARTFTYDPAFIDKYLVDMNFFNTADLTGM 614 Query: 533 LLLLLLLAMPLLPGLYWLWCR 553 + + L+ A + G+ + Sbjct: 615 IWIYLMGAGIFIVGMKFHLFH 635 >UniRef50_P29388 NADH-ubiquinone oxidoreductase chain 5 n=133 Tax=Eukaryota RepID=NU5M_ARATH Length = 669 Score = 373 bits (959), Expect = e-102, Method: Composition-based stats. Identities = 137/688 (19%), Positives = 255/688 (37%), Gaps = 72/688 (10%) Query: 6 LLTWSLILYLFASLASLFLLGL--DRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVAR 63 + + L L S + F + ++ ++ +I+ R Sbjct: 1 MYLLIVFLPLLGSSVAGFFGRFLGSEGSAIMTTTCVSFSSILSLIAFYEVALGASACYLR 60 Query: 64 FAPPF----EFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMN 119 AP A DSL+ M++V++ + + LYS++YM E + +++ Sbjct: 61 IAPWISSEMFDASWGFLFDSLTVVMLIVVTSISSLVHLYSISYMSEDPH--SPRFMCYLS 118 Query: 120 IFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDK-TSINAGMLYFFIAHAGSVLI 178 IF M+ L+ DN + +E + L+S+ L+ + + A + + G + Sbjct: 119 IFTFFMLMLVTGDNFLQLFLGWEGVGLASYLLIHFWFTRLQADKAAIKAMLVNRVGDFGL 178 Query: 179 MIAFLLMGRESGSLDFASFRTLSLSP-----------GLASAVFLLAFFGFGAKAGMMPL 227 + L ++DF++ + P S + +L F G K+ + L Sbjct: 179 ALGILGCFTLFQTVDFSTIFACASVPRNSWIFCNMRLNAISLICILLFIGAVGKSAQIGL 238 Query: 228 HSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAIS 286 H+WLP A P+ SAL + MV G+F I + + I++ + GA++ Sbjct: 239 HTWLPDAM-EGPTPVSALIHAATMVTAGVFMIARCSPLF----EYSPTALIVITSAGAMT 293 Query: 287 ALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLL 346 + L + + D+KR++A+ST +G ++ A G++ +S +FHL+ Sbjct: 294 SFLAATTGILQNDLKRVIAYSTCSQLGYMIFACGISNYSVS--------------VFHLM 339 Query: 347 NHALFKGLLFLGAGAIISRL-HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFI 405 NHA FK LLFL AG++I + DM KMG LA P T A LIG L++ P L GF Sbjct: 340 NHAFFKALLFLSAGSVIHAMSDEQDMRKMGGLASSFPLTYAMMLIGSLSLIGFPFLTGFY 399 Query: 406 SEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRS--TH 463 S+ + ++ + A + +V+ ++ +TF S Sbjct: 400 SKDVILELAYTKYTISGN-------FAFWLGSVSVLFTSYYSFRLLFLTFLVPTNSFGRD 452 Query: 464 AEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPG 523 + P M + ++LLA + + A A+ + ++P Sbjct: 453 ISRCHDAPIPMAIPLILLALGSLFVGYLAK----------DMMIGLGTNFWANSLLVLPK 502 Query: 524 TFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGV 583 + ++ +P+L + A + Sbjct: 503 NEILAESEFAAPTIIKLIPILFSTLGAFVAYNVNPVADQFQR-----------AFQTSTF 551 Query: 584 MQPLRVVFSALFRLRQQL-DPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAK 642 L F+ + Q L D +R + + + + I +RLA+ Sbjct: 552 CNRLYSFFNKRWFFDQVLNDFLVRSFLRFGYEVSFEALDKGAIEILGPYGISYTFRRLAE 611 Query: 643 EIQHLQSGDFRLYCLYVVAALVVLLIAI 670 I LQSG Y ++ L + + Sbjct: 612 RISQLQSGFVYHYAFAMLLGLTLFVTFF 639 >UniRef50_B3QY40 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QY40_CHLT3 Length = 772 Score = 373 bits (959), Expect = e-102, Method: Composition-based stats. Identities = 127/575 (22%), Positives = 223/575 (38%), Gaps = 67/575 (11%) Query: 8 TWSLILYLFASLASLFL-LGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAP 66 +L+L L + +F L R + + + + + + + Sbjct: 10 IITLLLPLLSFTFLIFFNGKLPRKGDFVGVGLVGISLALSLYIFTSVVFGEYDPNFKVGW 69 Query: 67 PFEFADLT-------------LRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAA 113 F + D + +D+L+A M++V++L+ + ++S+ YM K Sbjct: 70 SFTWLDFGNVPGVGPLTISMGILIDNLTAIMLVVVTLISFLVHIFSMGYMAGD--KYYGR 127 Query: 114 MGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKT-SINAGMLYFFIAH 172 ++ IF SM+ +++ DN F + +E++ LSS+ L+ +K + +A F Sbjct: 128 YYAYLGIFTFSMLGIVLSDNLFSIYIFWELVGLSSYLLIGFFFEKDSAADAQKKAFLTNR 187 Query: 173 AGSVLIMIAFLLMGRESGSLDFASF------RTLSLSPGLASAVFLLAFFGFGAKAGMMP 226 G + + + L++ + + + +LS +A LL F G K+ P Sbjct: 188 VGDIGMWLGILILYSQFHTFGYEEIYQNIQDGNFTLSEAWLTAGGLLLFMGCVGKSAQFP 247 Query: 227 LHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAI 285 LH WLP A P+ SAL + MV G++ + ++ L + ++ IGA Sbjct: 248 LHIWLPDAM-EGPTPVSALIHAATMVAAGVYFVARIFPIL------SVDALHVIAFIGAF 300 Query: 286 SALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHL 345 +A + A+ + DIKR+LA+ST+ +G +++ +G+ A FHL Sbjct: 301 TAFMAATIAITQHDIKRVLAYSTLSQLGYMVMGMGIG--------------AYAPAFFHL 346 Query: 346 LNHALFKGLLFLGAGAIISRL-HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGF 404 + HA FK LFLG+GA+I H DM MG L K MPWT A I LA+S +P +GF Sbjct: 347 VTHAFFKACLFLGSGAVIHATHHEQDMRWMGGLRKNMPWTFATFTIAMLALSGLPMTSGF 406 Query: 405 ISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHA 464 +S+ + VE + V L + + F G R+ Sbjct: 407 MSKDAILAGSLGFANVEGGFY----YLIPVFGFGAAMLTAFYMGRQMWLVFFGENRAHLK 462 Query: 465 EE-----------------AQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFT 507 +V M +++LA L V S + L H Sbjct: 463 PASHDDHHHGHDDHHGHHSVHDVDWVMRFPLVVLATLSVFFVYSINPLDGGDGWFLHVIQ 522 Query: 508 NTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMP 542 + + P + L + A Sbjct: 523 TPDTVVKTTDAHVEPHAEVNEHKEGASLFISSAFA 557 Score = 43.3 bits (101), Expect = 0.035, Method: Composition-based stats. Identities = 16/157 (10%), Positives = 42/157 (26%), Gaps = 2/157 (1%) Query: 516 SGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENA 575 + I H ++L+L L +Y+ + Y Sbjct: 611 AAIDHATHEAHYTAIGLSSVMLILGFGLAFIVYFKGIIDPDKTAEAIKPLYLYSYNKWYW 670 Query: 576 MAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHV--TARAQSTEPFWDERVIRPI 633 ++ ++ L + + + + G R + + ++ Sbjct: 671 DEIFNATIISGSMMLARTLAWIDKNIVDGMVNGVGNLTKWVAFRNGDFDKLVVDGLVNLT 730 Query: 634 VSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLIAI 670 Q ++ +Q+G + Y + A+V Sbjct: 731 GFTVQFFGLVLRKIQTGRVQTYVALALVAVVGYFCYF 767 >UniRef50_B1KJV8 Proton-translocating NADH-quinone oxidoreductase, chain L n=2 Tax=Shewanella RepID=B1KJV8_SHEWM Length = 622 Score = 373 bits (959), Expect = e-101, Method: Composition-based stats. Identities = 141/654 (21%), Positives = 248/654 (37%), Gaps = 84/654 (12%) Query: 31 AIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAPPFEFADLTLRMDSLSAFMVLVISL 90 +S L + + TQ +L TL +D LS M+ +I+ Sbjct: 34 VGSVSLAALLAVSLNIALWDQTQFVLQTSLGQWLTIDKLSLSFTLYLDPLSLVMITIITC 93 Query: 91 LVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWF 150 + + LYS +YM+E ++N+F+++M+ L++ DN + +E + L S+ Sbjct: 94 IGALIHLYSASYMKEDAD--ICRFFVYLNLFVSAMLFLVLADNLILLYLGWEGVGLCSYL 151 Query: 151 LVIARQDK-TSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRTLSL------- 202 L+ + + A F I G ++I +L+ + +L+ + S Sbjct: 152 LIGFWYREVKNSQAANKAFIITRIGDTAMLIGIILIFYQFDTLNIQQIQAHSQQLLQNSE 211 Query: 203 -----SPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASAL-MSGVMVKIGIF 256 + GL S LL F G K+ +PLHSWLP A A P+ SAL + MV GI+ Sbjct: 212 LLTKGAVGLTSLCCLLLFAGAAGKSAQVPLHSWLPDAM-AGPTPVSALIHAATMVTAGIY 270 Query: 257 GILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIIL 316 + + L + +G I+ +LG ALA+ D+KR+LA+ST+ +G + Sbjct: 271 LVARNIELF----SLAPDVLHFIAIVGVITLILGATSALAQTDLKRILAYSTISQLGYMF 326 Query: 317 LAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRL-HTHDMEKMG 375 LA+GV A+FHL+ HA FK LLFL AGA+I + H ++ KMG Sbjct: 327 LALGVGSA--------------SAAVFHLMTHAFFKALLFLSAGALIYCMHHEKNIFKMG 372 Query: 376 ALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVM 435 L K P A + IGC A++++P +GF S+ + + PI Sbjct: 373 GLRKSQPLLALSFGIGCAALASLPMTSGFFSKELILERTLFAQQ----------PILWWG 422 Query: 436 LAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWL 495 V + K++ + F G P M ++ L L ++ + + Sbjct: 423 GVVGAFFTALYSAKLFFVIFFGKLSRPST---HNTPRAMAAVLIALMLLSLIGGIQPQGV 479 Query: 496 APKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSR 555 + + PP + L + L + + ++L+ + Sbjct: 480 FAHFAALEQSLITAPPLSALEHW----------------LPIFLPVLTVILAWFLFIKGM 523 Query: 556 RAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVT 615 + SG ++ FRL + Sbjct: 524 FTPNSQPSQPSVGAKQQLQRFLHSGWAFDSLYHLILVKPFRLISAYN------------- 570 Query: 616 ARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLIA 669 +++ R + + L +++ Q+G R Y +V V+ + Sbjct: 571 ------RRDIVDQLYRQLERLSSLLYRQLNRFQTGQLRHYSASLVIFCVLAIAW 618 >UniRef50_UPI00016C46D7 NADH dehydrogenase I chain L n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C46D7 Length = 652 Score = 373 bits (957), Expect = e-101, Method: Composition-based stats. Identities = 151/683 (22%), Positives = 259/683 (37%), Gaps = 57/683 (8%) Query: 4 LQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAG-----V 58 L L+ +L L A L L + A + VI ++ + G Sbjct: 7 LALIVLALPLSASLLAALLAYTPLKKFAHVPLILACGSAAVIALLLLTKVMDGGNAATFS 66 Query: 59 TLVARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFM 118 V FA T+ +D LSA M+ +I+ + +L++ YM + G A M Sbjct: 67 EPVTWFAAGHLNVRFTIAVDPLSAMMLSMITFIATWIALFASGYM--HGDGGFARFFAVM 124 Query: 119 NIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSIN-AGMLYFFIAHAGSVL 177 ++F+ SM L++ +N + +E + L S+ LV +K S A F + G Sbjct: 125 SLFVFSMCGLVLANNFLLLVAFWEGVGLCSYLLVGYYFEKPSAATAARKAFLVTRIGDTG 184 Query: 178 IMIAFLLMGRESG-----SLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLP 232 ++ L+ + G +L F + + LL F G K+ PL+ WLP Sbjct: 185 FLLGIFLLWKLGGWHTDLNLLFDHIQRHPPEQWQLTTACLLLFCGAVGKSAQFPLYVWLP 244 Query: 233 RAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGV 291 A P+ SAL + MV G++ + + + + I+V +G I+A+L Sbjct: 245 DAM-EGPTPVSALIHAATMVTAGVYLLARCSPLF----AMAPDAQIVVSWVGGITAILAA 299 Query: 292 LYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALF 351 ALA+ D+KR+LA+STV +G + LA+G + ++ A+FHL HA F Sbjct: 300 FIALAQTDLKRVLAYSTVSQLGFLFLALGTSGTIDPK-------FAVVAAMFHLFTHAFF 352 Query: 352 KGLLFLGAGAIISRLHTH-DMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYT 410 K LLFL AG+++ + D+ + G L K MP T L G A++ +P L+GF S+ Sbjct: 353 KALLFLAAGSVMHGMGGVIDVRQFGGLRKVMPITHLTFLCGAGALAGVPLLSGFWSKDLI 412 Query: 411 WQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPR--STHAEEAQ 468 +SL S + + +V T L + Y +TF G + A Sbjct: 413 LESLLEASETGSRYTAGYFALFLVACT-TAFLTAFYTFRAYFLTFWGPEKIPHEAGHHAH 471 Query: 469 EVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQ 528 E P +M + +++LA + + A + + VP F+ Sbjct: 472 ESPPSMTIPLVVLAVGALAVGAVVEPFTHWFSDFVGATQTIASSRGLTPAKEVPHHFNWV 531 Query: 529 VTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLR 588 + L L + L LY + M + Sbjct: 532 MAGISAALALSGIGLAFVLYRNGGADKVPFG------------------------MNGVF 567 Query: 589 VVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQ 648 + + L + + + + R I + Q L ++ +Q Sbjct: 568 KASRDKLYVDELYGAVLVAPSNVLA---FLARVFDGFLDALTRLIAAIPQFLGHLVRPIQ 624 Query: 649 SGDFRLYCLYVVAALVVLLIAIA 671 +G + Y L + + V L + Sbjct: 625 NGLVQFYALSMALGVAVFLTFVV 647 >UniRef50_C0JX69 Subunit 5 of NADH-plastoquinone oxidoreductase n=1 Tax=Pyramimonas parkeae RepID=C0JX69_9CHLO Length = 642 Score = 373 bits (957), Expect = e-101, Method: Composition-based stats. Identities = 132/696 (18%), Positives = 251/696 (36%), Gaps = 96/696 (13%) Query: 7 LTWSLILYLFASLASLFLL---------GLDRLAIKLSGITSLVGGVIGIISGITQLHAG 57 W + ++ S + L L R + + + + Q + Sbjct: 8 YAWLIPVFPLFSATVMGLGLISFQKATQSLRRDLAFFTIFLLGISVIFSLAIFFFQYNGN 67 Query: 58 VTLVARFAPPF---EFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAM 114 + ++ +D LS+ M++V+S + + +Y+ YM +G Sbjct: 68 GSYQWEMEWVVSQNFSLEMGYLIDPLSSTMLVVVSTVAFLVMIYTDGYMNYDQG--YVRF 125 Query: 115 GFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKT-SINAGMLYFFIAHA 173 ++++F ASM+ L++ N + +E++ L S+ L+ +T + +A F Sbjct: 126 FSYLSLFTASMLGLVLSTNLVQVYIFWELIGLCSYLLIGFWFTRTTAGDACQKAFITNRM 185 Query: 174 GSVLIMIAFLLMGRESGSLDFASFRTLSLS--------PGLASAVFLLAFFGFGAKAGMM 225 G +++ L + S F S L + +L F G +K+ Sbjct: 186 GDFGLLLGILGFYWLTKSFHFNEIAFRLESLLQVDPKLIPLGTLFAILLFLGPISKSAQF 245 Query: 226 PLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGA 284 PLH WLP A P+ SAL + +V G+F + ++ + G Sbjct: 246 PLHVWLPDAM-EGPTPISALIHAATLVAAGVFLVGRMFPIF----DQFPIVMSTIAWTGC 300 Query: 285 ISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFH 344 ++A LG A + D+K+ LA+STV +G +++A+GV LFH Sbjct: 301 LTAFLGATIATTQVDLKKGLAYSTVSQLGYMMMAMGVG--------------SYSAGLFH 346 Query: 345 LLNHALFKGLLFLGAGAIISRLH---------THDMEKMGALAKRMPWTAAACLIGCLAI 395 L+ HA K LLFLG+G+ I + +M +MG L K+MP TA LIG L+I Sbjct: 347 LITHAYSKALLFLGSGSAIHGMEGAVGFSPYINQNMNQMGGLRKKMPITAITFLIGTLSI 406 Query: 396 SAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITF 455 PP F S+ LF + PI + +T GL ++Y +TF Sbjct: 407 CGFPPFACFWSKDAILSDLFQAN-----------PILWLFAWLTAGLTSFYMFRIYFLTF 455 Query: 456 CGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVA 515 G R + +E M+ +++L +++ L+ + Sbjct: 456 EGTFRGPNISLVKESGPMMLFPLIVLTIPTLILGLTGTPFKDFFKSFQENIPIETDVDW- 514 Query: 516 SGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENA 575 + S + + LL +Y+ SR A Sbjct: 515 --------PEFLTMAGSSVGIGLLGFLFAFFVYYKCSISRTALV---------------- 550 Query: 576 MAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVS 635 + PL + L + + + R + ++ + ++ Sbjct: 551 ------SLSLPLYEFSKNKWYLDDLYEIIIVKANR--KLAQRILFFDQYFIDGLVNFSGI 602 Query: 636 ATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLIAIA 671 + +++ ++G F+ Y ++ L+ + + Sbjct: 603 FVFFTGEGLRYTETGRFQAYGSTILFVLISFVGYLV 638 >UniRef50_C1F220 NADH dehydrogenase I, L subunit n=2 Tax=Bacteria RepID=C1F220_ACIC5 Length = 687 Score = 372 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 153/721 (21%), Positives = 270/721 (37%), Gaps = 89/721 (12%) Query: 3 ALQLLTWSLILYLFASLASLFLLGLDRL-AIKLSGITSLVGGVIGIISGITQLHAGVTLV 61 L+LL L + A+ + R+ A L+ + + ++ +++ + + V V Sbjct: 1 MLKLLWLIPALPMLAAALIALMPRQRRVPAAALAIGSLGISLLLSLVALVQTIANPVRQV 60 Query: 62 ARFAP---PFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFM 118 F ++ L +D L A M+++++ + ++ +YSL YM E F+ Sbjct: 61 YNFNWLQFGSQWVQLGWILDPLCAVMLVMVTFVGLLIFIYSLGYMAHDE--NFTRFFCFL 118 Query: 119 NIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLY-FFIAHAGSVL 177 +F +M+ +++ ++ + +E++ L+S+ L+ K S A F G + Sbjct: 119 ALFAGAMLGVVLANSLLLLFMCWEIVGLTSYLLIGFWFHKPSAAAAAKKAFITTRIGDLG 178 Query: 178 IMIAFLLMGRESGSLDF----------ASFRTLSLSPGLA-----SAVFLLAFFGFGAKA 222 +++ + + SG+L F ++ + LA +A+ LL F G K+ Sbjct: 179 LLLGMVWLYASSGTLLFYNNGAGCLEHSALAAMVTQTTLAGMAVSTAIALLLFCGAAGKS 238 Query: 223 GMMPLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTG--LPLWWGILV 279 G +PLH WLP A P+ SAL + MV G++ I +V + A +V Sbjct: 239 GQVPLHVWLPDAM-EGPTPVSALIHAATMVAAGVYLIARVYPLMAAAATPHTISAALQVV 297 Query: 280 MAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLL 339 +GAI+A A+A+ DIKR+LA+STV +G ++L +GV G+ Sbjct: 298 AWVGAITAFFAACIAVAQNDIKRILAYSTVSQLGYMMLGLGVG--------------GVA 343 Query: 340 GALFHLLNHALFKGLLFLGAGAIISR-LHTHDMEKMGALAKRMPWTAAACLIGCLAISAI 398 +FHL+ HA FK LLFLGAG++I D+ MG L + MP T + G LA+ Sbjct: 344 IGMFHLITHAFFKALLFLGAGSVIHGCTEEQDIRNMGGLRRFMPITFVTYMCGMLALCGF 403 Query: 399 PPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGA 458 P GF S+ + + A L + F G Sbjct: 404 PLFAGFWSKDEILHAAHGWPISLGP---------FYLGAAGALLTAFYMTRQVCYVFFGP 454 Query: 459 PRSTHA---------------EEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIA 503 R A + E P M V +++LA VL+ ++ P + Sbjct: 455 RRLPEATADLSSPRPPEACVIRDPHESPAVMTVPLIVLALFAVLLGFISTPAWPWFSNFL 514 Query: 504 HAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTG 563 + T T + L +L+++ ++ + GL W R R Sbjct: 515 ISTRATLDLTRFAAADLA------------MLMIVSSLIVFAGLGLGWWLYGRKPIERAT 562 Query: 564 DAWACGYGWENAMAPSGNGVM--QPLRVVFSALFRLRQQLDPTLRL------NKGLAHVT 615 D A + L R+ + + +A +T Sbjct: 563 DPDALQTLQPTLFHVLQQRFYVDEIYDATILRLARIASVVADGFDRWILGGTVQAIAALT 622 Query: 616 ARAQSTEPFWDERVIRPIVSA----TQRLAKEIQHLQSGDFRLYCLYVVAALVVLLIAIA 671 + D + R Q+G + Y + AL VL + Sbjct: 623 RLLGHVDAAIDTHAVNGGFDLGCRELNRSGALFATWQNGRVQTYLRTLGVALAVLAAWVL 682 Query: 672 V 672 + Sbjct: 683 L 683 >UniRef50_A0RMA9 Hydrogenase 4 membrane subunit n=2 Tax=Campylobacter fetus RepID=A0RMA9_CAMFF Length = 650 Score = 371 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 195/666 (29%), Positives = 345/666 (51%), Gaps = 25/666 (3%) Query: 6 LLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFA 65 +L + + L L + ++A+ + + + I I +++ Sbjct: 1 MLEIIYTSFFLVGIICLVLYRVPKIALYIGLAIPCIISIFSTIYFIKNINSTYGFKLAGN 60 Query: 66 PPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKG-AAAMGFFMNIFIAS 124 F + LS F +I+ + + +Y++ Y++E++ +G A N FI S Sbjct: 61 FLFSP---HFIITPLSGFFSFIITFIAIGICIYTIGYIKEFKDRGNLAVFAALFNFFILS 117 Query: 125 MVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLL 184 M+ ++ + F FIVL+E+M+L S L+ +K S M+Y IA G+ I+IA L Sbjct: 118 MLLVVSSSDVFSFIVLWEIMTLISALLLKFNDEKHSNKTVMIYLSIAQIGAFCILIALLF 177 Query: 185 MGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASA 244 + +GS F + L + P +A+ + +L GFG+K GM P H W P +P APS+ + Sbjct: 178 ISYFAGSFSFIQWSKLDIDPTVATCILILLLIGFGSKIGMFPFHVWAPLVYPLAPSNVAG 237 Query: 245 LMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLL 304 ++SG+M K+ IFGI++ ++ L + + + V+A+GAISAL+G+ YAL + D +L+ Sbjct: 238 MLSGIMSKMAIFGIIQFSVIL----PITSGFALSVVALGAISALIGITYALIQNDYIKLI 293 Query: 305 AWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIIS 364 ++S+VEN+GII+L VGV G+S+ +P L ++G +GALFH+LNH+ FK LLFLG+G+I S Sbjct: 294 SYSSVENLGIIMLGVGVGFYGISIAEPTLVLLGFIGALFHVLNHSTFKSLLFLGSGSIYS 353 Query: 365 RLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVA 424 T +M +G LA++MP+TA LIG ++ISA+PPLNGFISEW+ ++S+F + +++A Sbjct: 354 VTRTKNMNSLGGLARKMPFTALFFLIGAISISALPPLNGFISEWFIYRSMFMGALDDSIA 413 Query: 425 LQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEE-AQEVPNTMIVAMLLLAA 483 +L +A++ LA+TG + V F+K+YG+ F G P+ + A E M M +LA Sbjct: 414 SRLIFALAIICLALTGAMVVYAFIKLYGVIFAGTPKDENIHNRACEKSFFMPFGMFILAF 473 Query: 484 LCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPL 543 + A+ A+ + + ++ ++ + +P +++LL L Sbjct: 474 SSIYFAVFANNIILFLGNVVLYLVPQTMYSMNINVISMPA-----------IMILLIFAL 522 Query: 544 LPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDP 603 + R + WACG+ + M+ + N + + + S + + + + Sbjct: 523 ALPFLLFGLFGANMSKVRASEPWACGFKFSPQMSMNSNSFVGDFKRLISKVIKFKTETK- 581 Query: 604 TLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAAL 663 + TE W + + PI+ +A +I Q+G Y +Y++ L Sbjct: 582 ----QQNYFSNVDYKTGTEDVWWKILYEPIIKFNMLIADKIGAFQNGRSSFYVVYILVYL 637 Query: 664 VVLLIA 669 +L+ Sbjct: 638 YAMLVV 643 >UniRef50_B2V982 Proton-translocating NADH-quinone oxidoreductase, chain L n=5 Tax=Aquificales RepID=B2V982_SULSY Length = 648 Score = 371 bits (952), Expect = e-101, Method: Composition-based stats. Identities = 142/679 (20%), Positives = 257/679 (37%), Gaps = 52/679 (7%) Query: 7 LTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIIS----GITQLHAGVTLVA 62 W + + + L G L LSGI +++G I I+ I +G Sbjct: 3 YLWIIPFSPLIAFVIIGLFGYKLLKEPLSGIVAVIGVAISAIASVKGFIDVAESGKYYDL 62 Query: 63 RFAPPFEFADLTLRM----DSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFM 118 + D ++ + D LSA M V++ + +++ YM+ E ++ Sbjct: 63 KLFNWLTIGDYSISVSIFWDPLSALMTCVVTCVSTFIFIFATGYMKGDE--SYPRFFAYL 120 Query: 119 NIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKT-SINAGMLYFFIAHAGSVL 177 ++F+ M+ L + DN +E + L+S+ L+ K + NA M F + G L Sbjct: 121 SLFVFMMLMLTLSDNLVQLFFGWEGVGLASYLLIGFWHYKKSAANAAMEAFVVNRVGDWL 180 Query: 178 IMIAFLLMGRESGSLDFASFRT--LSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAH 235 ++ LL G+LD+ + + + + LL F G K+ +PLH WLP A Sbjct: 181 FLLGILLAFTTFGTLDYLQIFNKLHGMDYIIVTFIALLLFGGAVGKSAQIPLHIWLPNAM 240 Query: 236 PAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYA 294 P+ SAL + MV G++ + ++ V+ IG +SA L Sbjct: 241 -EGPTPVSALIHAATMVAAGVYMVARLMPVF----ASSEIALDTVLFIGTMSAFLAATMG 295 Query: 295 LAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGL 354 L + DIKR++A+ST+ +G + A G+ + +FHL +HA+FK L Sbjct: 296 LVQNDIKRIIAYSTLSQLGYMFAAEGLGLFSE--------------GMFHLTSHAVFKAL 341 Query: 355 LFLGAGAIISRLHT-HDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQS 413 LFLG+G+++ LH D++KMG + + MP T LIG LA++ IPP GF S+ + Sbjct: 342 LFLGSGSVLIALHHLLDVQKMGQIGRLMPITMGTFLIGSLALAGIPPFVGFFSKDPIIEG 401 Query: 414 LFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHA--EEAQEVP 471 + ++ A L + L +++ +TF R H E E P Sbjct: 402 AYEINT-----------FAFTFLWLGAFLTAFYIFRLFFLTFFDGDRLDHHIREHVHESP 450 Query: 472 NTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTP 531 M + +++LA V++ + + + + + + V Sbjct: 451 PNMTIPLIVLATATVILGFFREFFINFLKPSLDPAYMSFLSPEVKALVNEGLSRSHHVHI 510 Query: 532 SLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVF 591 L L L L + A Y + +PL ++F Sbjct: 511 EANAFEFLGHSLTSLLGILLLATALAGIFTAYTI----YQIRKIDPVKVGDMFKPLYILF 566 Query: 592 SALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGD 651 + + + + ++ + + + Q G Sbjct: 567 YNRWFFDKIYYAIFVYGYYKLSKVMWFIGDKIII-DGIVDGSGKTSLFASDIFRKTQMGR 625 Query: 652 FRLYCLYVVAALVVLLIAI 670 Y + ++ +V+ L Sbjct: 626 ISGYVIQMLIGVVIFLSLF 644 >UniRef50_B6YQ51 NADH dehydrogenase I subunit L n=32 Tax=Bacteroidetes RepID=B6YQ51_AZOPC Length = 637 Score = 370 bits (951), Expect = e-101, Method: Composition-based stats. Identities = 139/696 (19%), Positives = 254/696 (36%), Gaps = 92/696 (13%) Query: 3 ALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVA 62 LL + LF L L ++ + + + Sbjct: 1 MSSLLIIIVPFVLFFVLGLLGTNLKSNISGIIGTGGMSICTFTAYVMAYQYFFRIGKKGE 60 Query: 63 RFAPPFEFADL-------------TLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGK 109 D + +D +S M++VI+ + ++ +YSL YM+ G Sbjct: 61 GVWKEIVPLDFQWLHFMGEMHINLGVLLDPISVMMLVVITTVSLMVHIYSLGYMKGEIG- 119 Query: 110 GAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQ-DKTSINAGMLYF 168 F+++F SM+ L+V N F + +E++ +SS+ L+ +++ A F Sbjct: 120 -FQRYYAFLSLFSFSMLGLVVATNIFQMYIFWELVGVSSYLLIGFYYIKPSAVAASKKAF 178 Query: 169 FIAHAGSVLIMIAFLLMGRESGSLDFASFRT-------------LSLSPGLASAVFLLAF 215 + + +I L++ + + DF + L ++ L F Sbjct: 179 IVTRFADLGFLIGILILSYYTRTFDFRALTANNAVLVTASTAGRTFLGLSVSVWALALIF 238 Query: 216 FGFGAKAGMMPLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLW 274 G K+ M PLH WLP A P+ SAL + MV G++ I ++ Sbjct: 239 MGGAGKSAMFPLHIWLPDAM-EGPTPVSALIHAATMVVAGVYLITRLFPVYF---FAAPS 294 Query: 275 WGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLT 334 ++ +GA ++ + A+ + DIKR+LA+ST+ + ++ A+GV+ G Sbjct: 295 VLKMIAFVGAFTSFFTAIIAVVQTDIKRVLAFSTISQISYMMAALGVSKYGGYEG----- 349 Query: 335 VVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLA 394 +G ++FHL HA FK LLFLGAG++I +++++M M L K MP T LI CLA Sbjct: 350 -LGYTASMFHLFTHAFFKALLFLGAGSVIHVVNSNEMNNMCGLHKYMPITNITFLIACLA 408 Query: 395 ISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGIT 454 I+ IPP +GF S+ + PI +L V GL ++Y Sbjct: 409 IAGIPPFSGFYSKDEVLVATLH-----------YQPIIFWILWVVAGLTAFYMFRLYFCI 457 Query: 455 FC-GAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPAT 513 F G + + E P MI +++L+ V L Sbjct: 458 FWNGEKKYDIYHASHESPFLMIFPLVILSVFSVFGGLIP-----------------FANF 500 Query: 514 VASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWE 573 V+S + + V +++ + + + LY + Sbjct: 501 VSSDNISLHTHINWTVASMSVMIAVFGIGIAAFLYLKDSGRPAKIAQ------------- 547 Query: 574 NAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPI 633 L + F + + + + + + + + Sbjct: 548 ---------FCGVLYKLILHKFYWDEIWMWMTKRV-IFQFICESVKWFDRHIIDWSMNGL 597 Query: 634 VSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLIA 669 QR + ++ LQSG + Y ++ L ++ I Sbjct: 598 AWTIQRFSLSVKGLQSGHVQFYMWIFISGLTLITIW 633 >UniRef50_C9RKX6 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RKX6_FIBSS Length = 651 Score = 369 bits (949), Expect = e-100, Method: Composition-based stats. Identities = 138/694 (19%), Positives = 267/694 (38%), Gaps = 81/694 (11%) Query: 1 MDALQLLTWSLILYLFASLA---SLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAG 57 M L + ++L+ + + A + I + + + Sbjct: 1 MIDDITLGYLILLFPLITFVVNGLFLGNKCAKAAAIFAVICNGLAFAAAGTLAFHYFSSD 60 Query: 58 VTLVARFAPPFEFAD--------LTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGK 109 F + + +D LS M++V++ + + ++YS+ YMRE + Sbjct: 61 FAPQKAILFDHTFIPFIGDLVARIGMLVDPLSVMMLVVVTFISFMVNIYSIGYMRED--R 118 Query: 110 GAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKT-SINAGMLYF 168 A +++F SM+ L++ N F + +E++ +SS+ L+ K +++A F Sbjct: 119 AAGRFFALLSLFSFSMLGLVIATNLFQMFIFWELVGVSSYLLIGFWYHKPSAVSASKQAF 178 Query: 169 FIAHAGSVLIMIAFLLMGRESGSLDFASFRTLSL----------------SPGLASAVFL 212 + ++ +L+ GS DF++ +LSL + Sbjct: 179 ILTRFADSFFLLGIVLVSYVVGSFDFSTLNSLSLIDFQKQFINLGLVTIPKSEALVLGSI 238 Query: 213 LAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLP 272 L F G K+ M P+H WLP A +S + S MV G++ + ++ Sbjct: 239 LIFTGGWGKSAMFPMHIWLPNAMEGPTPVSSIIHSATMVVAGVYLVARLFPFFAICDNA- 297 Query: 273 LWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPL 332 L+M +GA + + + A ++DIKR+LA+ST+ +G ++ A+G +G + Sbjct: 298 ---LTLIMWVGAFTMVFAAVIACTQKDIKRILAYSTLSQLGYMMFALGACKIG-----QV 349 Query: 333 LTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGC 392 + V G + FH+ HA FK LFL AG++I ++ T+D++ MG L K+M T A LI Sbjct: 350 VAVTGWTASTFHIFTHAFFKCSLFLIAGSLIHQVGTNDLDAMGGLGKKMKLTYACTLISI 409 Query: 393 LAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYG 452 LAIS IPP +GF S+ + F + + +T GL +++ Sbjct: 410 LAISGIPPFSGFFSKDEIILAAFQGHH----------YVVFGLALLTSGLTTFYMFRLFF 459 Query: 453 ITFCGAPRSTHAEEAQ-EVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPP 511 + F GAPR + M + + +LA +L + + + Sbjct: 460 LAFHGAPRHEGVKAGHVHEDFAMTLPIAILAIPALLSGVLGKGIFEQFFVPGQ------- 512 Query: 512 ATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYG 571 V + L + V + ++ L+ +L W + R+G Sbjct: 513 LNVPQLVRLDHAEWLPFVAVGIAVVALVIAWVLYASPWAKVQRALDESNRSG-------- 564 Query: 572 WENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIR 631 + V F + +R + A++ + E ++ Sbjct: 565 ---------------IYKVIYHKFYFDEMYYAVVRQF-IFGGIARVARAFNDYVIEGLLA 608 Query: 632 PIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVV 665 V +L ++ Q+G Y ++ +++ Sbjct: 609 FTVWFVHKLGDLVRFAQAGYLPFYLGTLIVGVLL 642 >UniRef50_A8LTG8 NADH dehydrogenase (Quinone) n=58 Tax=Proteobacteria RepID=A8LTG8_DINSH Length = 969 Score = 369 bits (949), Expect = e-100, Method: Composition-based stats. Identities = 124/575 (21%), Positives = 225/575 (39%), Gaps = 32/575 (5%) Query: 7 LTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAP 66 L +L +L ++ R A I ++ + G + A Sbjct: 8 LFIIALLPFLGALVPGLMIRAGRTACASFTAVPTALAFIMLLILSPAVLRGEVITAEIGW 67 Query: 67 -PFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASM 125 P + +D L L+I+ + ++ LY+ Y+ + G ++ +F +M Sbjct: 68 LPQLGLSASFFLDGLGLLFALMITGVGLLIILYARFYLSGDDPMGQ--FYTYLLLFQGAM 125 Query: 126 VALLVMDNAFWFIVLFEMMSLSSWFLVIARQD-KTSINAGMLYFFIAHAGSVLIMIAFLL 184 + +++ DN ++ +E+ SLSS+ L+ + + + AG + ++ L+ Sbjct: 126 LGIVLSDNILLLLIFWELTSLSSFLLIGYWKHLPEGRQGARMALAVTGAGGLAMIGGMLI 185 Query: 185 MGRESGSLDFASFRTLS---LSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSH 241 +G GS + + +L G K+ P H WLP A AAP+ Sbjct: 186 LGNIVGSYNLTDILQAGEQIRASEWYLPALILILLGAFTKSAQFPFHFWLPHAM-AAPTP 244 Query: 242 ASA-LMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDI 300 SA L S MVK G+F + ++ L W +V G ++ ++G AL + D+ Sbjct: 245 VSAYLHSATMVKAGVFLMARMWPVLAGTDA----WFYIVATTGLVTMVMGAGIALFKDDL 300 Query: 301 KRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAG 360 K LLA+STV ++G++ + +G T + A+FH++NH FK LF+ AG Sbjct: 301 KALLAFSTVSHLGLLTMLLGFG-----------TQAAAVAAVFHIINHLTFKAALFMTAG 349 Query: 361 AIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRV 420 + HT D++++G L MP T A + L+++ IP NGF+S+ + + Sbjct: 350 IVDHETHTRDIKRLGGLRHLMPITFAIGTVAALSMAGIPLFNGFLSKEMMLEEASHTGWL 409 Query: 421 EAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLL 480 + V+ L+V + G F G R + + + P M + L Sbjct: 410 GNP------WVVPVVATFGALLSVAYSFRFIGHVFLGPVRDDYPAKPHDPPFGMWASPAL 463 Query: 481 LAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLA 540 L L ++I ++ + + A T V +L L+ Sbjct: 464 LVVLVLVIGMAPFVAEGIVTAASSAVTGADLHPHLKIWHGFTPALWMSVVATL--GGLML 521 Query: 541 MPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENA 575 + L L +W +RR + D G Sbjct: 522 LALHGKLDPIWQAARRPEAKAIFDGLVAGLVALTR 556 >UniRef50_C6XJX2 Proton-translocating NADH-quinone oxidoreductase, chain L n=6 Tax=cellular organisms RepID=C6XJX2_HIRBI Length = 761 Score = 369 bits (949), Expect = e-100, Method: Composition-based stats. Identities = 145/699 (20%), Positives = 238/699 (34%), Gaps = 90/699 (12%) Query: 30 LAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAPPFEFADLTLRMDSLSAFMVLVIS 89 + + SL S V + A+ +R+D++S M+ V++ Sbjct: 79 VVMAALCAASLFFAQFFAASSGVADTQSVLIARWIDVGAMQANWAIRIDTMSIVMMFVVT 138 Query: 90 LLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSW 149 + + +YS YM G+ A ++++F M+ L+ DN +E + L+S+ Sbjct: 139 SVSSLVHIYSWGYMSHDMGR--ARFFTYLSLFTFMMLMLITADNFLQLFFGWEGVGLASY 196 Query: 150 FLVIARQDKTSINAG-MLYFFIAHAGSVLIMIAFLLMGRESGSLDFAS------------ 196 L+ K S NA + F G V + + + G+++FA Sbjct: 197 LLIGFWYHKPSANAASIKAFVTNRVGDVGFALGIMTVFLVFGTVEFAPVFEAIKTNATVT 256 Query: 197 --------------FRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHA 242 L ++ + +L F G K+ + LH WLP A P+ Sbjct: 257 PFAFGEAGHAQDVVISVLGVTAPAMEIIGVLLFIGAMGKSAQLLLHVWLPDAM-EGPTPV 315 Query: 243 SAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIK 301 SAL + MV G+ ++ + + ++ IGA +A+ AL + DIK Sbjct: 316 SALIHAATMVTAGVVLVVLCSPIY----EFTTYASAMITFIGAATAIFAATVALMQNDIK 371 Query: 302 RLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGA 361 R++A+ST +G + A GV A+FHL HA FK +LFL AGA Sbjct: 372 RVIAYSTCSQLGYMFFAAGVG--------------AYDAAMFHLFTHAFFKAMLFLTAGA 417 Query: 362 IISR-LHTHDMEKMGALAKRMPWTAAACLIGCLAI--SAIP----PLNGFISEWYTWQSL 414 +I DM KMG L +MP LIG LAI IP GF S+ + Sbjct: 418 VIHGLADEQDMRKMGGLRAKMPIAWLMMLIGTLAITGVGIPGTHIGFAGFFSKDAILEEA 477 Query: 415 FSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHA--EEAQEVPN 472 F + A A V L ++ +TF G R+ + A + P Sbjct: 478 FLSGGMYAQ-------FAFWAGIVAALLTSFYSWRLMIMTFHGKTRANKHDFDHAHDAPL 530 Query: 473 TMIVAMLLLAALCVLIA--LSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVT 530 M + + LLA VL ++++ + ++ + + H VT Sbjct: 531 VMGMPLYLLAGGAVLAGVVFYSAFIGDLTKVNKDFWGSSIYKAEIAETSHDGEDGHAPVT 590 Query: 531 PSLLLL----------------LLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACG----- 569 ++ A G AW G Sbjct: 591 EHVVAANSHGEENHGDDHAEASGHAAADADHGDGHHGIHPPTWVLWAPFCAWMSGLVLAI 650 Query: 570 --YGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDE 627 YG+ + S P+ S + + D D Sbjct: 651 IFYGFVPHIPRSMGERSGPMHAFLSNKWYFDEIYDFVFVKGSKALGDFFWKIIDMKIIDG 710 Query: 628 RVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVL 666 I + T+ A + L +G Y ++ A VV Sbjct: 711 LGPNGISNLTKASAGGLSRLHTGYLYHYAFIILIAAVVF 749 >UniRef50_C1ZFV1 NADH dehydrogenase subunit L n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZFV1_PLALI Length = 696 Score = 368 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 142/625 (22%), Positives = 255/625 (40%), Gaps = 59/625 (9%) Query: 58 VTLVARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFF 117 + + D+ LR D+++A M+++++ + ++ ++++ +YM + KG Sbjct: 111 FEVYRWMSVGGLTVDIVLRADAMTALMLVMVNFVSLLVAIFASSYM--HGDKGYPRFFGA 168 Query: 118 MNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAG-MLYFFIAHAGSV 176 M +F+ SM L++ N + +E + L S+ L+ K S A F + G Sbjct: 169 MALFVFSMNMLVLAGNFIEVFIFWEAVGLCSYLLIGHWYHKPSAAAAARKAFVVNRIGDF 228 Query: 177 LIMIAFLLMGRESGSLDFASFRT-------LSLSPGLASAVFLLAFFGFGAKAGMMPLHS 229 +M A L+ R GS+DF + + PGL + + LL G K+ PLH Sbjct: 229 GLMTAIFLIYRTFGSVDFETVLDPARLAELAAAQPGLVTTIALLLLLGAIGKSAQFPLHV 288 Query: 230 WLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISAL 288 WLP A P+ SAL + MV G++ I + + ++V +GAI+AL Sbjct: 289 WLPDAM-EGPTPVSALIHAATMVTAGVYLIARTTPIFVHSPTAQ----LVVAGVGAITAL 343 Query: 289 LGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNH 348 + + AL + D+KR+LA+STV +G + +A+G A +L T A+FHLL H Sbjct: 344 VAAITALCQYDLKRVLAYSTVSQLGYMFMALGAAAASPALAAHAETF-----AMFHLLTH 398 Query: 349 ALFKGLLFLGAGAIISRLHTH-DMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISE 407 A FK +LFL AG+++ + DM + L K +P T L G LA++ P L+GF S+ Sbjct: 399 AFFKAVLFLAAGSVMHAMGDVIDMRRFSGLRKALPITHITFLCGALALAGFPLLSGFWSK 458 Query: 408 WYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPR--STHAE 465 ++ ++ + + + + +T L + Y +TF G R Sbjct: 459 DEILAVVWEATQTGDY--KTYFYLILGVGLLTSLLTAFYTFRAYYLTFHGPERFPEEAGH 516 Query: 466 EAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTF 525 + M + + +LAAL V+ L A I + P Sbjct: 517 HPHDASPAMAIPLYILAALAVVAGLILGP----------------THIYAHYIEMTPNFP 560 Query: 526 HTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQ 585 + +++L+ L G L YG S + Sbjct: 561 TAAPAGMNVGMMVLSTVLALGGIGLAYTI---------------YGKATRPEYSDARPLS 605 Query: 586 PLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQ 645 V L Q + +A ++A + + ++++ + I+ Sbjct: 606 LWENVSLNGLYLDQLYGALIVRP--MATLSAVCEFVDRMILDKIVDAVGLIPIIAGGMIR 663 Query: 646 HLQSGDFRLYCLYVVAALVVLLIAI 670 LQ+G Y ++ ++V L ++ Sbjct: 664 PLQNGLVSSYAAVMLLGVIVALASV 688 >UniRef50_B3DZT2 NADH dehydrogenase subunit L n=2 Tax=Verrucomicrobia RepID=B3DZT2_METI4 Length = 601 Score = 368 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 151/674 (22%), Positives = 267/674 (39%), Gaps = 81/674 (12%) Query: 1 MDALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTL 60 M+ L L+ L ++ L + + + + + + Sbjct: 1 MNEQFLAWLLLLSPLSSAFIIWAFLKPFPSLSQWVSVGACGIAFLVSLGISLGSIPEPSP 60 Query: 61 VARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNI 120 ++ L + D LS M+LV+S + ++ +YS+ YM E G+ +++ Sbjct: 61 ISWIDVGGLSIQLGMVFDPLSKVMLLVVSGVGLMIHIYSMGYMAEDPGRS--RFFAELSL 118 Query: 121 FIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFI-AHAGSVLIM 179 F+ SM+ ++V N + +E++ +SS+ L+ +K S A F+ G + Sbjct: 119 FMLSMLGIVVATNFIMMYIFWELVGVSSYLLIGFWFEKPSAAAAATKAFLANRIGDFGFL 178 Query: 180 IAFLLMGRESGSLDFA-SFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAA 238 + +L +GSL F S + + L + + LL F G K+ +PLH WLP A Sbjct: 179 LGIILFWTLTGSLMFDPSVASYLKNHPLVTIMGLLLFCGCVGKSAQIPLHVWLPDAM-EG 237 Query: 239 PSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAE 297 P+ SAL + MV G++ + ++ L ++ GAI+A + L A + Sbjct: 238 PTPVSALIHAATMVAAGVYMLCRIFFVL----EQSPQALDVIAWTGAITAAVAALTATQQ 293 Query: 298 QDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFL 357 DIKR+LA+ST+ +G +++AVG + A+FHL HA FK LLFL Sbjct: 294 DDIKRILAYSTMSQLGYMVMAVG--------------SSATVAAMFHLCTHAFFKALLFL 339 Query: 358 GAGAIISRL-HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFS 416 GAG+++ L H D+ KMG L K+MP T LIG A++ IP +GF S+ + + Sbjct: 340 GAGSVLHVLHHEQDIWKMGGLWKKMPLTFLTFLIGSCALAGIPGFSGFFSKDTIIEMVGE 399 Query: 417 LSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIV 476 +R + + T GL +++ +TF G P++ A A+E P M++ Sbjct: 400 KNR-----------VLFWLALFTAGLTAFYMTRLFVVTFFGPPKTEVAAHAKESPLVMVL 448 Query: 477 AMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLL 536 ML+L+ V+ A G+A P + ++L Sbjct: 449 PMLVLSFFAVVGGY-----------------PFLGIERALGLAHQPVEEASSRLHVMILS 491 Query: 537 LLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFR 596 +L+ + L + + + L +F F Sbjct: 492 VLVGVIGLGIGAFAYWGKKSEIV---------------------------LFPLFKNKFY 524 Query: 597 LRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYC 656 + D TL + A E ++R + ++ Q+G+ R Y Sbjct: 525 FDEFYDLTLLKFQQW-GAQLLAWFDEWIIGFGIVRGSAFIVSVGGEILRIFQTGNIRSYA 583 Query: 657 LYVVAALVVLLIAI 670 +L+ Sbjct: 584 FLFGGGAAAILVYF 597 >UniRef50_Q39QB8 NADH-plastoquinone oxidoreductase, chain 5 n=8 Tax=Deltaproteobacteria RepID=Q39QB8_GEOMG Length = 669 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 140/706 (19%), Positives = 249/706 (35%), Gaps = 85/706 (12%) Query: 7 LTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHA---------- 56 W + L+ + LLG + G + + L Sbjct: 4 YVWLIPLFPLIGVVINGLLGKKIKNETVIGGIGSLMVFGSFLVSFGILIELLSRSAEERV 63 Query: 57 -GVTLVARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMG 115 L A++ +D LSA M++V++ + + +YS+ YM + +G Sbjct: 64 FEKVLFTWIKSGNFNAEIGFLIDPLSALMIMVVTGVGFLIHVYSIGYM--HGEEGFYRYF 121 Query: 116 FFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSI-NAGMLYFFIAHAG 174 ++N+F SM+ L++ +N V +E + L S+ L+ K S +AG F + G Sbjct: 122 TYLNLFTFSMLLLVLGNNLLLMFVGWEGVGLCSYLLIGYYFHKKSAGDAGKKAFVMNRVG 181 Query: 175 SVLIMIAFLLMGRESG------SLDFASFRT---LSLSPGLASAVFLLAFFGFGAKAGMM 225 ++ + G +++F L G+ + + L F G K+ + Sbjct: 182 DFGFLLGVFTLYWYLGQNHNVWTINFRQLAANAHLLPVGGVVTVIALCFFLGATGKSAQL 241 Query: 226 PLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGA 284 PL++WLP A P+ SAL + MV G++ I ++ + ++V +GA Sbjct: 242 PLYTWLPDAM-EGPTPVSALIHAATMVTAGVYMIGRLNFVYI----RSHETMMIVAIVGA 296 Query: 285 ISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFH 344 +A+ A+ DIKR+LA+STV +G + LA+GV +FH Sbjct: 297 ATAIFAATIGTAQNDIKRVLAYSTVSQLGFMFLAMGVG--------------AFTAGIFH 342 Query: 345 LLNHALFKGLLFLGAGAIISRLHT-----------HDMEKMGALAKRMPWTAAACLIGCL 393 L+ HA FK LFLG+G++I +H DM MG L K+MP T L+ + Sbjct: 343 LMTHAFFKACLFLGSGSVIHSMHHALHHAHSHDDPQDMRNMGGLKKQMPITFLTFLVSTI 402 Query: 394 AISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGI 453 AI+ IP +GF S+ F+ I A+ G ++ + Sbjct: 403 AIAGIPGFSGFFSKDEILWQAFANPLHGD-----LNIILWATGAIAAGFTAFYMFRLVFM 457 Query: 454 TFCGAPR--STHAEEAQEVPNTMIVAMLLLAALCVLIAL--SASWLAPKIMHIAHAFTNT 509 TF G R E P + +++L L V+ + I + + Sbjct: 458 TFFGECRIVEKAKSHLHESPLVITFPLMVLGLLAVVGGYVGIPKLIGELFGGIPNYLEHY 517 Query: 510 PPATVAS-----GIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGD 564 L G H L+ + L G+ + Sbjct: 518 LEPVFKGSEEFMAQQLAHGAAHHSPALEWGLMGTSVVIALIGISIAFFL----------- 566 Query: 565 AWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPF 624 Y ++ L + + + D Sbjct: 567 -----YVVSPSIPAKFTAAFPALHRAVYNKWYVDELYDFLFVNPCKALGNGLWKGFDVVV 621 Query: 625 WDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLIAI 670 D V + + + ++++Q+G Y L + +VV++ Sbjct: 622 VDGVVNG-VAAIVKGFGGALRNIQTGYVHNYALGMSLGVVVIVAFY 666 >UniRef50_A7GV43 Proton-translocating NADH-quinone oxidoreductase, chain L n=8 Tax=Bacillaceae RepID=A7GV43_BACCN Length = 620 Score = 368 bits (944), Expect = e-100, Method: Composition-based stats. Identities = 139/674 (20%), Positives = 262/674 (38%), Gaps = 75/674 (11%) Query: 7 LTWSLILYLFASLASLFLLGLD-RLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFA 65 W + L+ AS L L G + L G ++G + + + + + + Sbjct: 4 YAWLIPLFPLASFMLLILFGRKLKGISSLLGSLFAFLSLVGAVIVLLERFSSENVKHTWL 63 Query: 66 PPFEF---ADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFI 122 +++L+A M+L+++ + + +Y+ YM+ E + ++ +F Sbjct: 64 WLKAGSVDISFGFEVNALNALMLLIVTTVSFLVHVYAKGYMQGDE--RLSVFYAYLGLFT 121 Query: 123 ASMVALLVMDNAFWFIVLFEMMSLSSWFLVIAR-QDKTSINAGMLYFFIAHAGSVLIMIA 181 +M+ L++ N V +E++ L S+ L+ + + A F + G + I Sbjct: 122 FAMLGLVISTNLLQLYVFWELVGLGSFLLIGFYFFKEEAKAAAQKAFIMTRIGDACLFIG 181 Query: 182 FLLMGRESGSLDFASFRTL----SLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPA 237 +L+ ++GS D+ ++SP + + L F G K+G PLH+WLP A Sbjct: 182 MILLFWQAGSFDYDVIFKAVQTEAISPSIITLTALFIFIGAVGKSGQFPLHTWLPDAM-E 240 Query: 238 APSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALA 296 P+ SAL + MV G++ + + V +G +A+ AL Sbjct: 241 GPTPVSALIHAATMVAAGVYLVA----AMFPLFVASPVAMQTVAIVGGFTAIFAASIALV 296 Query: 297 EQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLF 356 + DIKR+LA+STV +G ++LA+G G + ++FHL HA FK LLF Sbjct: 297 QTDIKRILAYSTVSQLGYMMLALG--------------SAGYVASIFHLTTHAFFKALLF 342 Query: 357 LGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFS 416 L AG++I +HT ++ +MG L K+M T L+G AIS +P +GF S+ + + Sbjct: 343 LAAGSVIHAVHTQNIHEMGGLQKKMKVTGLLFLVGTFAISGVPFFSGFFSKDEILMATWM 402 Query: 417 LSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIV 476 + V+ + L ++Y + F G R E +E P M + Sbjct: 403 HGN----------YVLFVLAILATFLTSFYMFRLYFLVFTGEER--AKREVRESPRIMTL 450 Query: 477 AMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLL 536 M L V I + + + Q ++ Sbjct: 451 PMTALGVFAVAIGYIHTPWFGTF--------------LGDWLIKDVSFQVAQGHGPAWIM 496 Query: 537 LLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFR 596 ++ + G+ + + + R WA G G L + + Sbjct: 497 VIATLVSFGGILLAYLMYNKRSLSRD---WAGGEGTI-------------LSHLLIKKYY 540 Query: 597 LRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYC 656 + + T+ + + E E + + I S + + LQ+G+ ++Y Sbjct: 541 IDEIYHVTVL--PIVKGIAYTLHLFEVCIVEGIAKLIQSLVKGGSYGGSKLQNGNVQVYG 598 Query: 657 LYVVAALVVLLIAI 670 +L L++ + Sbjct: 599 TVTAISLAALVVIL 612 >UniRef50_B2A694 NADH dehydrogenase (Quinone) n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A694_NATTJ Length = 748 Score = 368 bits (944), Expect = e-100, Method: Composition-based stats. Identities = 145/558 (25%), Positives = 256/558 (45%), Gaps = 22/558 (3%) Query: 6 LLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFA 65 L + + L S + + + + + ++ + + G+ Sbjct: 15 LPILIIFVPLLGSFGVILISSVSEKLRDIYTVIISAVPLVLLAVMYPLVQQGIVQYN--I 72 Query: 66 PPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASM 125 F L R+DSL +ISL+ + +LY+ Y+ + FF + Sbjct: 73 EWFLEIGLIFRLDSLGFLFTALISLIWFLATLYATEYISHEHNRN--RFYFFWLFTFGAT 130 Query: 126 VALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLM 185 + + V + F V FEMMSL+S+ LVI +DK ++ AG L+ F+ G + I+ +M Sbjct: 131 LGVFVTGDLFGLFVFFEMMSLTSYVLVIHEEDKDAMRAGNLFLFLGIGGGLAILFGLFIM 190 Query: 186 GRESGSLDFASFRTLSLSPGLASAVFLLAFF-GFGAKAGMMPLHSWLPRAHPAAPSHASA 244 +L+ A ++ G+ V LL F GFG KAG++PLH WLP+AHP AP+ ASA Sbjct: 191 YFNLETLEIAPMLGDMVAAGVNIPVLLLLFIIGFGIKAGIVPLHIWLPKAHPVAPTPASA 250 Query: 245 LMSGVMVKIGIFGILKVAMDLLAQTGLPLW---------WGILVMAIGAISALLGVLYAL 295 ++SG+++K G++G+ +V + ++ WG+ + IG I+ +LG L AL Sbjct: 251 ILSGLLIKTGVYGLWRVFLMVMGPASSQEVELYQQYITNWGMGLFWIGIITMVLGALMAL 310 Query: 296 AEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLL 355 + K++LA+S+V VG I++ +G A+ + +G G + H++NHALFK L Sbjct: 311 LQTSAKKMLAYSSVSQVGFIIMGLGAAVYLGTDG-----PIGFAGGIMHVINHALFKACL 365 Query: 356 FLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLF 415 FL GAI R H D++++ + K+MP+ A +I L I+ +P NG+ S+ +L Sbjct: 366 FLIVGAIFIRTHLLDIDRVRGMFKQMPFMGIAFIIAALGIAGVPLFNGYASKTILHHALS 425 Query: 416 SLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMI 475 +S + A IA + T L V F+K++ F G V + Sbjct: 426 EVSYLT---PGTAMFIADKIFVFTSALTVSYFIKLFRGLFLGKLPQEWQNTNFSVAPIIK 482 Query: 476 VAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLL 535 V + + L + I + +++ + + A V S + + ++ +++ Sbjct: 483 VVVSVFVVLIIAIGVFPNFVLEQFVMPTMAGFPYESEVVTSQLQGMDLFTSKDLSKVVVV 542 Query: 536 LLLLAMPLLPGLYWLWCR 553 L+ L + W R Sbjct: 543 FLIAGTITLADQKFHWSR 560 >UniRef50_B4UA31 NADH dehydrogenase (Quinone) n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4UA31_HYDS0 Length = 633 Score = 367 bits (943), Expect = e-100, Method: Composition-based stats. Identities = 191/651 (29%), Positives = 331/651 (50%), Gaps = 42/651 (6%) Query: 24 LLGLDRLAIKLSGITSLVGGVIGII-----SGITQLHAGVTLVARFAPPFEFADLTLRMD 78 L + L I +G + I + L L + + +D Sbjct: 11 LWKFLEVGFSLLYIGIFLGCIALFIKGDNYITVAYLWGVADLSIHLNTTIKHITYSFYVD 70 Query: 79 SLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFI 138 LS F + +++ + S+Y+L Y+ E M NIFI SM+ +L+ NAF F+ Sbjct: 71 RLSLFFIGIVAFNGAINSIYTLDYIEEENYDKKILMTMLKNIFILSMILVLLSANAFTFL 130 Query: 139 VLFEMMSLSSWFLVIARQDKT-SINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASF 197 + +E+MS+ S+FLV+ K + A ++Y + H G+ I+++F+ + SL F + Sbjct: 131 LFWEVMSILSFFLVLWDFKKEENYKASLIYIVMTHIGTAFILLSFVGFYINTNSLSFDHW 190 Query: 198 RTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFG 257 + LSL+ + +FL + GFG KAG++ LH+WLP+AHP APS SALMSG+M+K+ ++ Sbjct: 191 QNLSLNTFWTTWIFLFSVLGFGMKAGIIGLHNWLPKAHPVAPSFVSALMSGLMIKMPVYM 250 Query: 258 ILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILL 317 ++ + Q P +G+L++ IG I+ L G+L A + +K +LA+S++EN+GII + Sbjct: 251 FIRYWFYFIKQ--YPASFGLLILTIGTITMLFGILNASVQNRLKAMLAYSSMENIGIIYV 308 Query: 318 AVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGAL 377 +G+AM+ SL+ L + L +LFH+LNH+LFK LLF+ AG++++R HT ++ K+G Sbjct: 309 GIGLAMIFKSLNVEYLYALALGASLFHILNHSLFKSLLFMSAGSLMARAHTQEIAKLGGA 368 Query: 378 AKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLA 437 K P L+G L++ A+PP NGFISEW +QSL +V+ L +A P++ LA Sbjct: 369 IKYAPKLGTITLVGMLSLVALPPFNGFISEWLLYQSLLLSLKVKGYYLWIASPLSASFLA 428 Query: 438 VTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAP 497 +TGG+A++ VK +G+TF G PR + +++ +++M +LA C+L+ + ++ Sbjct: 429 LTGGIAMLSAVKYFGLTFLGNPRKDIKRK-EDIKTMSLISMGILALSCLLVGVLPVFVLD 487 Query: 498 KIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRA 557 I ++ P +GI + + + +L+ LL +Y S+ + Sbjct: 488 VINNL------IPVPIHVNGIFEIKTPENFGSIAPFFIGILMVFMLLISIYLNKYISKHS 541 Query: 558 AFRRTGDAWACGYGWEN-AMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTA 616 + + WACG + S G QP++ + S L++ Sbjct: 542 IYYK---TWACGQEDVPLSAQYSPEGFSQPIKKITSKLYK-------------------- 578 Query: 617 RAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLL 667 +D S +L +Q+G +Y LY+ L++L+ Sbjct: 579 ---DGLDIFDGIYGFIAKSLLNKLQTLKYKIQTGVIHVYILYMAITLIILI 626 >UniRef50_B9ZEN4 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Natrialba magadii ATCC 43099 RepID=B9ZEN4_NATMA Length = 678 Score = 367 bits (943), Expect = e-100, Method: Composition-based stats. Identities = 137/693 (19%), Positives = 262/693 (37%), Gaps = 67/693 (9%) Query: 12 ILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAPPFEF- 70 + L A + +L L+GI + G + + + + +G Sbjct: 13 LFPLVAFVVALTFGKYMPKKGALAGIIATGGSLALSVLMLVAVASGEVYHETLYQWAIGD 72 Query: 71 -----------ADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMN 119 + +D L+A M++++SL+ + ++SL YM G + Sbjct: 73 AASEIGADGIEFTFGILIDPLAALMLVIVSLIAFLVHIFSLGYMNAEGETGLPRYYASLG 132 Query: 120 IFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIAR-QDKTSINAGMLYFFIAHAGSVLI 178 +F SM+A + DN + FE++ L S+ L+ + +++ +A F + G Sbjct: 133 LFTFSMLAFVYADNLLMAFMFFELVGLCSYLLIGFWFRTRSAPSAAKKAFLVTRFGDYFF 192 Query: 179 MIAFLLMGRESGSLDFASFRTLSLSP----------------GLASAVFLLAFFGFGAKA 222 ++ + + G++ FA + + + LL G K+ Sbjct: 193 LLGVVAIAATFGTVAFAGDNSFVTAAETAIDNGDTLFGFGAETWVTITALLVLGGVIGKS 252 Query: 223 GMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAI 282 PLH+WLP A + ++ + + MV G++ + + + L ++ + Sbjct: 253 AQFPLHTWLPDAMEGPTTVSALIHAATMVAAGVYLVAR----MFGYYALSPTALAIIAFV 308 Query: 283 GAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGAL 342 G +AL + + DIK++LA+ST+ G ++L +GV G + + Sbjct: 309 GGFTALFAATMGVVKDDIKQVLAYSTISQYGYMMLGLGVG--------------GYVAGV 354 Query: 343 FHLLNHALFKGLLFLGAGAIISRL-HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPL 401 FHL+NHA FK LLFLGAGA+I + H DM KMG L + P T L G LA++ I P Sbjct: 355 FHLMNHAFFKALLFLGAGAVIVLMHHEQDMWKMGGLKDKAPITYYTFLAGALALAGIIPF 414 Query: 402 NGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRS 461 +GF S+ + E + L A M V +M +TF G PRS Sbjct: 415 SGFWSKDEILYDALIIGIEEPIILA-----AYAMALVAVFFTGFYTFRMVFLTFHGEPRS 469 Query: 462 THAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTN---TPPATVASGI 518 AE+ ++ +M +++L L ++ ++ K+ I F G+ Sbjct: 470 EAAEDPHDIGWSMKAPLIVLGVLALVAGIANLAPVAKLAQIDIVFLEHWLDGEYGAVEGL 529 Query: 519 ALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAP 578 + + L + + G+ L S + + Sbjct: 530 TYSAYGELLAFETAYIGGEQLTVLIAAGVSLLLAFSGAGLAWKLYNV---------PEPV 580 Query: 579 SGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQ 638 + + R + + + + A + + V+ + +A+ Sbjct: 581 AHKERLGSARQTLESNYYQDEY--QVWLAEGFTQPLARAADRFDQTVIDGVVNSVSTASL 638 Query: 639 RLAKEIQHLQSGDFRLYCLYVVAALVVLLIAIA 671 + ++ +Q+G Y +VA + LL+ + Sbjct: 639 FSSSRLKRIQTGLVTNYAALLVAGFIGLLLVLG 671 >UniRef50_D2QRI2 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QRI2_9SPHI Length = 635 Score = 367 bits (943), Expect = e-100, Method: Composition-based stats. Identities = 152/673 (22%), Positives = 285/673 (42%), Gaps = 55/673 (8%) Query: 5 QLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARF 64 LL S++L FA L + R+A ++ + + G ++ ++ + G+TL + Sbjct: 10 HLLMASILLLPFAGFLVLTM-ASRRVAQLIAVLLTGAGLLLSVLLAVNLPEQGITLQTNW 68 Query: 65 AP-PFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIA 123 A +T R+D+L+A M+L++ + ++ +YS++Y+ ++ ++ +F+ Sbjct: 69 AILSGASFPVTFRVDALAALMLLLVHFVALLVQVYSISYL--HDEPKLRRYSSYLQLFVG 126 Query: 124 SMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSI-NAGMLYFFIAHAGSVLIMIAF 182 +M+ +++ N +E++ L+S+ L+ ++ + A F + G + +I Sbjct: 127 AMLGIVLAGNLLVMYGFWELVGLASYLLIGFYAERPAASQAAKKAFLMNRVGDIGFLIGI 186 Query: 183 LLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHA 242 L +LDF + +A+ L F G K+ PL +WLP A P+ Sbjct: 187 FLTYYYFDTLDFTALADKGADGIAPTALGLCLFMGCVGKSAQFPLLTWLPDAM-EGPTPV 245 Query: 243 SA-LMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIK 301 SA L + MV GIF + +V L + + + + G A+ + DIK Sbjct: 246 SALLHAATMVAAGIFLLARVHPLLSPDALVVITIIGTITTL------WGGYSAVFQTDIK 299 Query: 302 RLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGA 361 ++LA+STV +G++++ +G + GA+FHLL HA FK LFL AGA Sbjct: 300 KVLAFSTVSQLGLMVVGMGTGN--------------VAGAMFHLLTHAFFKAGLFLSAGA 345 Query: 362 IISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVE 421 II +H+ DM +MG L K +P T A I A+S +P L+GF+S+ F + + Sbjct: 346 IIHAVHSQDMRQMGGLHKVLPTTFIAYTICAAALSGLPFLSGFLSKEAILGGAFGWAEAQ 405 Query: 422 AVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRST--HAEEAQEVPNTMIVAML 479 A L L+ P V++ + GL + + + F A RS A E M ++ Sbjct: 406 ASGLALSIP---VLVLFSSGLTAFYMARQWRLVFFSAYRSEITPLSAAHEPGWLMRGPVV 462 Query: 480 LLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLL 539 +LAAL + + S + L + + P + L + Sbjct: 463 ILAALSLWLWFSVNPL-------------------SGSGSWFFRLLPLADEPHVWWLAPV 503 Query: 540 AMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQ 599 ++ L+ W R R + YG+ + ++P + + L R Q Sbjct: 504 SVALVLLGGWAGFRLPEPNADRPYVQLSVNYGFLDLFYDRLA--IRPTVRLAAFLNRTDQ 561 Query: 600 QLDPTLRLNKGLAH--VTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCL 657 + + G+ + + + ++ RL + + +Q+G + Y Sbjct: 562 RAIDGVVNGAGIVTVVLAHLTSLLDRMGVDGLVNGAAWLAGRLGQVARSVQNGRVQSYIT 621 Query: 658 YVVAALVVLLIAI 670 V L+V+L + Sbjct: 622 AAVMGLLVILWWL 634 >UniRef50_B3E6C5 NADH dehydrogenase (Quinone) n=4 Tax=Desulfuromonadales RepID=B3E6C5_GEOLS Length = 666 Score = 366 bits (940), Expect = 1e-99, Method: Composition-based stats. Identities = 221/671 (32%), Positives = 338/671 (50%), Gaps = 20/671 (2%) Query: 2 DALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLV 61 D + L W++ L + L L L LS + + G+ + L Sbjct: 10 DPVSSLLWAIALIGLSGLPGLLLKRPGP-GQILSVCITACAALWGMAGALQILGGAPATR 68 Query: 62 ARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGA-AAMGFFMNI 120 P F L +D LSA +L + L + CSLY L Y+ + F + Sbjct: 69 YLLDWPLPFGPSELSVDPLSALFLLPLLLAALCCSLYGLAYLPAAVQPAVEKRVTLFSGL 128 Query: 121 FIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDK-TSINAGMLYFFIAHAGSVLIM 179 +ASM +LV + ++ +E+M+LSSW L++ Q AG +Y H GS+ + Sbjct: 129 LLASMALVLVARDGLLLLIAWEVMALSSWLLLMTDQQNLQVQRAGTVYLLATHTGSMALY 188 Query: 180 IAFLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAP 239 + F L+ E+GS F + +L+L + + + A GFGAKAG+MPLH WLP AH AP Sbjct: 189 VFFALLKGETGSFAFPAAHSLALGGTVTLVMLVAALIGFGAKAGIMPLHIWLPGAHANAP 248 Query: 240 SHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQD 299 SH SALMSG+M+K+GI+GI++ LP+W+G LV+ +GA+SA+ G+ A A++D Sbjct: 249 SHVSALMSGIMLKVGIYGIIRAVSFF---QQLPVWFGWLVLLLGAVSAITGIALASAQRD 305 Query: 300 IKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGA 359 +KRLLA S++EN+GII + +G+A+VG+ D +L ++GL GA H++NHALFK LLFLG+ Sbjct: 306 LKRLLACSSIENIGIICIGLGMALVGIQSGDRVLAILGLAGAFIHIINHALFKPLLFLGS 365 Query: 360 GAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSR 419 GAII T +++MG L++ +P TA L+G LAI +PPLNGF+ E + + FS Sbjct: 366 GAIIHATGTRQIDRMGGLSRILPRTAPLFLVGSLAICGLPPLNGFVGELFLYFGAFSDGM 425 Query: 420 VEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAML 479 + + + +LA+ GGLAV+ FVK+YG F G PR E P M++ M Sbjct: 426 LADLPVIG---FVAPILALVGGLAVITFVKLYGAVFLGVPRDPELAHGHESPLAMLLPMG 482 Query: 480 LLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLL 539 LLA +C+L + A L + + P + VP T + LL ++LL Sbjct: 483 LLAGICLLAGIGAPLLLQLVAPAVIQYAGVSPLLFSQVAGAVPLQQLTLLNGLLLAVILL 542 Query: 540 AMPLLPGLYWLWCRSRRAAFRRTGDAWACGY-GWENAMAPSGNGVMQPLRVVFSALFRLR 598 ++ +W + A W CGY M +G+ + + + S L R Sbjct: 543 -------VWLIWRFLVQRAPLAVSSTWGCGYLAPTPRMQYTGSAFSELITGLISGLVGSR 595 Query: 599 QQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLY 658 +L L+ T +++I P + ++ +Q G LY LY Sbjct: 596 GRLSG---LSGAFPASARFVSITTERILDQMIIPSLQGADWCLAWLRRMQHGHLHLYILY 652 Query: 659 VVAALVVLLIA 669 V A L VL++ Sbjct: 653 VFATLFVLMVW 663 >UniRef50_Q4UWA7 NADH-ubiquinone oxidoreductase NQO12 subunit n=52 Tax=cellular organisms RepID=Q4UWA7_XANC8 Length = 727 Score = 366 bits (939), Expect = 2e-99, Method: Composition-based stats. Identities = 142/742 (19%), Positives = 266/742 (35%), Gaps = 103/742 (13%) Query: 5 QLLTWSLILYLFASLASLFLLGL--DRLAIKLSGITSLVGGVIGIISGITQLHAGVT--- 59 LL ++ L S+ + + A ++ + V V+ ++ + G + Sbjct: 8 SLLIAVVLAPLVGSIVAGLFGRQVGRKGAQYVTILGVAVSCVLSCLTLYQLVELGASPFN 67 Query: 60 --LVARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFF 117 L F A + +D L+A M++V++ + ++ +Y++ YM E G + Sbjct: 68 QNLYTFFDVGNYSAHVGFMVDRLTAMMMVVVTFVSLLVHIYTIGYMEEDPG--YQRFFSY 125 Query: 118 MNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKT-SINAGMLYFFIAHAGSV 176 +++F SM+ L++ +N +E + L S+ L+ + ++ A M F + G Sbjct: 126 ISLFTFSMLTLVMSNNFLQLFFGWEAVGLVSYLLIGFWFKRPTAVFANMKAFLVNRVGDF 185 Query: 177 LIMIAFLLMGRESGSLDFASFRTLSLSPG-------------LASAVFLLAFFGFGAKAG 223 ++ + GSLD+++ + + + + + + F G K+ Sbjct: 186 GFILGIAGVLLWFGSLDYSTVFANATTMAGAKVQLFAGHEWSVMTLICICLFIGAMGKSA 245 Query: 224 MMPLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAI 282 +PLH WLP + P+ SAL + MV GIF + +++ L ++ I Sbjct: 246 QVPLHVWLPDSM-EGPTPISALIHAATMVTAGIFMVARMSPLF----ELSETALNFILFI 300 Query: 283 GAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGAL 342 GA +A L + + DIKR++A+ST+ +G + +A+GV+ A+ Sbjct: 301 GATTAFFTGLIGIVQNDIKRVVAYSTLSQLGYMTVALGVS--------------AYSAAV 346 Query: 343 FHLLNHALFKGLLFLGAGAIISRL-HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPL 401 FHL+ HA FK LLFL AG++I + H DM KMG L K M T +IG LA+ P Sbjct: 347 FHLMTHAFFKALLFLAAGSVIIGMHHEQDMRKMGGLRKYMKVTYWTSVIGTLALVGTPFF 406 Query: 402 NGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPR- 460 +GF S+ ++ + + G A++ + + ++ +TF G R Sbjct: 407 SGFYSKDTIIEAAAHHAHESHSWIATYGYWAVLGGVL---VTSFYSFRLLFLTFHGKERF 463 Query: 461 --------------------------------------------------STHAEEAQEV 470 + E E Sbjct: 464 RDAHAHDVHAHHDSAHTDAEAQVHTHDSHGHDAHDAHGHDDHGHGHGHHGAHEPHEPHES 523 Query: 471 PNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVT 530 + + ++LLA V I + P + + A ++ G Sbjct: 524 KWVVTLPLILLAIPSVAIGFFT--IGPMLFGTDWQGHHAAHAMKGQAVSFFTGIVDFYDP 581 Query: 531 PSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACG--YGWENAMAPSGNGVMQPLR 588 + L P + L F Y W+ +A P+ Sbjct: 582 ARDTVGALAEEFHGPVAFALHGMMAAPFFLTVAGLLLAALFYLWKPELATKSRKAFAPIV 641 Query: 589 VVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQ 648 + + + + +RA T D + A ++ Q Sbjct: 642 WLLENKYGFDKLWINGFAGGGVVLGKASRAIDT-HVVDGVAVNGSARLIDLAAHLLRRTQ 700 Query: 649 SGDFRLYCLYVVAALVVLLIAI 670 SG Y ++ L+ LL + Sbjct: 701 SGFLYHYAFAMIIGLIALLAVL 722 >UniRef50_B2ULN9 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2ULN9_AKKM8 Length = 610 Score = 366 bits (939), Expect = 2e-99, Method: Composition-based stats. Identities = 144/667 (21%), Positives = 258/667 (38%), Gaps = 75/667 (11%) Query: 9 WSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAPPF 68 L L L + FLL L+ S + + + + + + Sbjct: 11 LLLFLPLVVAAFDWFLLTKRPDVAALTSTFSCLATFVLSLGLLDR-TGSDSFSWLPISDI 69 Query: 69 EFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVAL 128 DL +D LS+ M+LV++ + ++ ++SL YM + K +++F+ SM + Sbjct: 70 SSVDLGFVLDPLSSRMMLVVTGIGLLVHVFSLGYMADD--KAKTRYFACLSLFMFSMTGI 127 Query: 129 LVMDNAFWFIVLFEMMSLSSWFLVIARQDKT-SINAGMLYFFIAHAGSVLIMIAFLLMGR 187 ++ +N + +E++ LSS+ L+ + + NA F G +I L + Sbjct: 128 VLANNIAMTFIFWELVGLSSYLLIGHWYTRDTAANAAKKAFICNRVGDFGFLIGILTLWA 187 Query: 188 ESGSLDFASFR-TLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASAL- 245 + +LDF+ +S L + L F G K+ PLH WLP A P+ SAL Sbjct: 188 LTNTLDFSLMEIPAGISENLLNITVLCLFCGAVGKSAQFPLHVWLPDAM-EGPTPVSALI 246 Query: 246 MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLA 305 + MV G++ +++V + P ++ IGAI+A++ A + DIKR+LA Sbjct: 247 HAATMVAAGVYMMVRVQYSI-GIEAFPALACNVIAGIGAITAVIAAFMATQQNDIKRVLA 305 Query: 306 WSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISR 365 +ST+ +G +++A+G+ + A+FHL HA FK LLFLGAGAII Sbjct: 306 YSTLSQLGYMVMALGL--------------LAGEAAMFHLFTHAWFKALLFLGAGAIIFA 351 Query: 366 L-HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVA 424 H D+ KMG + KRM T+ +I +A+ AIP +GF S+ ++ + Sbjct: 352 CHHEQDIWKMGGIMKRMKLTSLTFIIATMALIAIPFTSGFFSKEAILEAALRKN------ 405 Query: 425 LQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAAL 484 P+ + A L +++ + F G RS +E A EV M+V +L+LA L Sbjct: 406 -----PVFFWIGAGVALLTTFYMMRVIFVVFFGKSRSHSSEHASEVGGLMLVPLLILAVL 460 Query: 485 CVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLL 544 ++ +A + G + + + +L Sbjct: 461 ALISGY---------------------GFIADRLVPFNGFVSESFHMGMPFYVSMGALVL 499 Query: 545 PGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPT 604 L + A + + + + D Sbjct: 500 GILLAAAFYAGSPASDKLS--------------------GNAVSRALANRLYIDLFYDKV 539 Query: 605 LRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALV 664 L + ++ + T + ++ LQSG+ Y L+ Sbjct: 540 LVRGVQGVLAAIIDFMDQFIISGLIVGGLARLTAAIGSLLRRLQSGNMAAYTALFGIGLL 599 Query: 665 VLLIAIA 671 +++ Sbjct: 600 LVIYFTV 606 >UniRef50_C5VLQ3 NADH dehydrogenase subunit 5 n=10 Tax=Bacteroidales RepID=C5VLQ3_9BACT Length = 684 Score = 366 bits (939), Expect = 2e-99, Method: Composition-based stats. Identities = 142/724 (19%), Positives = 256/724 (35%), Gaps = 109/724 (15%) Query: 7 LTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLH----------- 55 L+ +L A + LF + + R + G L + + Sbjct: 6 FLILLLPFLSAVVLGLFGMKMPRKVAGIIGTCMLGTLFVLSLYTAYHYFFYTGEYTAMGE 65 Query: 56 -----------------AGVTLVARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLY 98 + ++ R+ +S M++VI+ + ++ +Y Sbjct: 66 TFNVTDGRLANGTYPTVTVFNITWLKFTELLTFNIGFRLSPISVMMLIVITTVSLMVHIY 125 Query: 99 SLTYMREYEG--------KGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWF 150 S YM E + G ++++F SM+ L+V N F + +E++ + S+ Sbjct: 126 SFGYMAERDENYKFEEYEHGFQRFYAYLSLFTMSMLGLVVATNIFQMYLFWELVGVCSYL 185 Query: 151 LVIARQDK-TSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFA------------SF 197 L+ K T+++A F + + +I L G+ ++ Sbjct: 186 LIGFYYPKHTAVHASKKAFIVTRFADLFFLIGILFFSFYVGTFNYDLNVNPGLVETLNGL 245 Query: 198 RTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASAL-MSGVMVKIGIF 256 + L F G K+ M PLH WLP A P+ SAL + MV G+F Sbjct: 246 AKNPHLTWVLPTALFLMFIGGAGKSAMFPLHIWLPDAM-EGPTPVSALIHAATMVVAGVF 304 Query: 257 GILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIIL 316 + + + + I A +A A A++DIKR LA+ST+ + +L Sbjct: 305 QVASLLPIYVQFGAQEQ--LHWIAWIAAFTAFYAAAVACAQRDIKRGLAFSTISQIAYML 362 Query: 317 LAVGVAMVGLSLHD------PLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHD 370 +A+GV +G + A+FHL HA+FK LLFL +GAII + ++ Sbjct: 363 VALGVCFYEKEHGSFYSAEYLHHGGLGYMAAMFHLFTHAMFKALLFLCSGAIIVIIGSNF 422 Query: 371 MEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGP 430 E MG L K MP T LIGCLAI+ IPP GF S+ + +L VE AL+ Sbjct: 423 KEYMGGLHKYMPITNICFLIGCLAIAGIPPFAGFFSKDEIISACNALPGVEGQALK---- 478 Query: 431 IAMVMLAVTGGLAVMCFVKMYGITFCGAP----RSTHAEEAQEVPNTMIVAMLLLAALCV 486 ++ + G+ ++Y + F G + QEVP M ++ LA + + Sbjct: 479 ---WIMTLVAGMTAFYMFRLYYVIFWGESYYEQDPENRRRPQEVPFVMWGPLVFLAIISI 535 Query: 487 LIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPG 546 ++ ++ + S+ ++A + Sbjct: 536 TAGWIP---------------------FGHFVSANGLSYDIHIDRSIATTSIIAALIGFA 574 Query: 547 LYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLR 606 L ++ + + + + T + Sbjct: 575 LATWMYAGKKQPVADALQ----------------RTFPRLHKAALNRFYIDNAWQFFTHK 618 Query: 607 LNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVL 666 + + + + + TQ + I+ QSGD R Y ++ + V L Sbjct: 619 I--VFRCFSIPIAWFDRHVIDGTFNFMAWGTQEAGESIRSWQSGDVRQYAVWFITGTVAL 676 Query: 667 LIAI 670 + + Sbjct: 677 TLVL 680 >UniRef50_C7JBM0 NADH-quinone oxidoreductase chain L n=8 Tax=Acetobacter pasteurianus RepID=C7JBM0_ACEP3 Length = 646 Score = 366 bits (939), Expect = 2e-99, Method: Composition-based stats. Identities = 151/693 (21%), Positives = 266/693 (38%), Gaps = 80/693 (11%) Query: 4 LQLLTWSLILYLFASLASLFLLGL--DRLAIKLSGITSLVGGVIGIISGITQLHAGVT-- 59 L L + +++ L + + D LA ++ + + + I + AG Sbjct: 5 LNLFSAAVLTPLVGATVAGLGGRFMGDTLAKAVTLLCMGIATLCAIGALWGGWLAGFGHS 64 Query: 60 ---LVARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGF 116 L A TLR D+LS MV ++ ++ ++ YSL YM Sbjct: 65 TVLLAQWVHAGGFDATWTLRFDALSVTMVAMVLVVSLLVHCYSLGYMSHDAMPTY-RFFS 123 Query: 117 FMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKT-SINAGMLYFFIAHAGS 175 ++++F +M+ L+ ++ +E + L+S+ L+ D+ + A + F + Sbjct: 124 YLSLFTFAMLMLVSSNDLIQLFFGWEGVGLASYLLIGYWYDRPSATAAAIKAFVVNRVAD 183 Query: 176 VLIMIAFLLMGRESGSLDFASFRT------------LSLSPGLASAVFLLAFFGFGAKAG 223 + ++ L+ ++ + + +S + + LL F G K+ Sbjct: 184 LFFLVGIGLIYVLFHTVQYDAIFAQVPQVLNAPYTLFGISFRMLEVICLLLFVGAMGKSA 243 Query: 224 MMPLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAI 282 + LH+WLP A P+ SAL + MV G+F + +++ L ++ I Sbjct: 244 QLFLHTWLPDAM-EGPTPVSALIHAATMVTAGVFLMARMSPLL----EFAPATRTFIILI 298 Query: 283 GAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGAL 342 GA + + + DIKR +A+ST +G + AVGV ++ Sbjct: 299 GATTCFFAATVGMVQPDIKRTIAYSTCSQLGYMFAAVGVG--------------AYQASV 344 Query: 343 FHLLNHALFKGLLFLGAGAIISRLH-THDMEKMGALAKRMPWTAAACLIGCLAISAIPPL 401 FHL HA FK LLFLGAG++I +H +M KMG L K++P T IG LA++ + P Sbjct: 345 FHLTTHAFFKALLFLGAGSVIHAMHDEQNMFKMGGLWKKLPLTYTVMWIGSLALAGVFPF 404 Query: 402 NGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGA-PR 460 G+ S+ +L+S ++ A + +T L ++ + F G Sbjct: 405 AGYWSKDAILNALWSTGSSASIY-------AWSLGTITAFLTAFYSWRLIFLVFHGQAAD 457 Query: 461 STHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLA---PKIMHIAHAFTNTPPATVASG 517 + + A E P M V ++LLA V+ + + +I A N P T+ Sbjct: 458 AHARDAAHESPAVMSVPLVLLAFGAVVAGILLAPFYIGTHQISFWEGAIFNAPDNTIMEN 517 Query: 518 IALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMA 577 + VPG + + L + +A+ Y A+ Sbjct: 518 LEHVPGLIAILPSLAGLAGIAVAVLC--------------------------YVLNPALP 551 Query: 578 PSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSAT 637 + PL + + D A + E E V +V A Sbjct: 552 TNMARACGPLYRFLLNKWYFDELYDAIFVR-PYAAIARVLWKDGEEGVVEAVPHDVVQAA 610 Query: 638 QRLAKEIQHLQSGDFRLYCLYVVAALVVLLIAI 670 + A + LQ+G +Y V+A LVVLL Sbjct: 611 RTSAAQAVKLQTGSIAIYAFTVLAGLVVLLTVA 643 >UniRef50_Q67KP4 NADH dehydrogenase I subunit L n=1 Tax=Symbiobacterium thermophilum RepID=Q67KP4_SYMTH Length = 685 Score = 365 bits (938), Expect = 3e-99, Method: Composition-based stats. Identities = 152/706 (21%), Positives = 262/706 (37%), Gaps = 57/706 (8%) Query: 1 MDALQLLTWSLILYLFA--SLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLH--- 55 MD W + A +L ++F L A + L+ + + + Sbjct: 1 MDFFLNTAWVIAALPLAVSALIAMFAGVLRDRAWIPGTVGMLITFLWSVGVLAAVIADPG 60 Query: 56 -AGVTLVARFAPPFEFADL----------TLRMDSLSAFMVLVISLLVVVCSLYSLTYMR 104 G L D ++D+L+A M+ +I+L+ V YS YM Sbjct: 61 HGGEVLYNTVPAWKASFDWASFGPYTVRMGFQVDNLTALMLPMITLVSVCVQYYSSAYM- 119 Query: 105 EYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKT-SINA 163 + K +N+F +M+ L++ DN F +V +E+M L S+ L+ ++ Sbjct: 120 -HGDKRIPRFYAALNLFTMAMLVLVMADNLFLLLVAWEIMGLCSYLLIGHWYEQAWPRYG 178 Query: 164 GMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRTL-------SLSPGLASAVFLLAFF 216 + F G + +M+ ++ + L +A + L + L F Sbjct: 179 QIKAFLTTRVGDIGMMVGIFIVFFAARDLTWAGLAEKVPVLVQDPATASLLALGAFLLFT 238 Query: 217 GFGAKAGMMPLHSWLPRAHPAAPSHASA-LMSGVMVKIGIFGILKVAMDLLAQTGLPLWW 275 G K+ PLH+WLP A A P+ SA + + MV G++ + + M +P W Sbjct: 239 GAIGKSAQFPLHTWLPDAM-AGPTPGSAIIHAATMVAAGVYLVGRAFMIF---GHVPAWV 294 Query: 276 GILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTV 335 ++V +GA ++L A DIK +LA+ST+ +G +++A+G+ Sbjct: 295 LVVVTFVGAFTSLFAASIATLRWDIKEVLAYSTISQLGYMIMAMGLG------------- 341 Query: 336 VGLLGALFHLLNHALFKGLLFLGAGAIISRLHT-HDMEKMGALAKRMPWTAAACLIGCLA 394 G FHLL HA FK LLFL AG++I H + KMG L K++P T ++G A Sbjct: 342 -GWTAGNFHLLTHAFFKALLFLAAGSVIHAHHHNQLLHKMGGLRKKIPITFWTWMVGYAA 400 Query: 395 ISAIPPLNGFISEWYTWQSLFS-LSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGI 453 ++ IP +GF S+ + + + A + M T L + + Sbjct: 401 LAGIPGFSGFFSKDELLLAALEWHNPLVATWPIWLQKLPFAMALTTAFLTAYYMTRATYL 460 Query: 454 TFCGAPRSTH-AEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPA 512 F G PR H E+A E P M + +++LA L + L ++ Sbjct: 461 AFFGEPRDMHLYEQAHESPKAMTIPLIILAVPAALYGWLGTPLFNHFTNLDWMVFIQNFL 520 Query: 513 TVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGW 572 + V + VT LL + L LY + RAA+ Y Sbjct: 521 HLPGLEHHVEFSTELMVTGMATAAGLLGIFLGWYLYAVVRPETRAAWIARFRPV---YTL 577 Query: 573 ENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRL------NKGLAHVTARAQSTEPFWD 626 AL R D + + + A + Sbjct: 578 VRNKYYVDEFYDLVAVKTTEALSRAVAWFDLNVVDGLVNLSGTLSVYASEAAAWFDKHVV 637 Query: 627 ERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLIAIAV 672 + ++ + L + L +G + Y + LV ++ + V Sbjct: 638 DALVNMWADIARALGAAFRRLSTGYVQQYMFTFLVMLVASVVLVQV 683 >UniRef50_A7HGW4 NADH dehydrogenase (Quinone) n=4 Tax=Anaeromyxobacter RepID=A7HGW4_ANADF Length = 654 Score = 364 bits (936), Expect = 4e-99, Method: Composition-based stats. Identities = 211/609 (34%), Positives = 309/609 (50%), Gaps = 15/609 (2%) Query: 64 FAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYE-GKGAAAMGFFMNIFI 122 L LR+D+LSA +L I + + ++Y L Y R+ G + + F + Sbjct: 54 LGGDVSAPGLGLRVDALSAIFLLPICAVSALGAIYGLGYHRQAALGARSVRLQIFYGLTT 113 Query: 123 ASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDK-TSINAGMLYFFIAHAGSVLIMIA 181 A MV L+ +A F+V +E+M+L + LV ++ A +Y H G++ + Sbjct: 114 AGMVLLVSATSAIVFLVGWEVMALGGFLLVHTDHERAEVQRAAFVYLAATHVGTLALFAL 173 Query: 182 FLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSH 241 F L+ + +G+ D LS S +A F LA GFG KAG+MPLH WLP AH AAPSH Sbjct: 174 FALLRQATGTFDLGGMAGLSGSGPVARGAFALALLGFGMKAGVMPLHFWLPGAHAAAPSH 233 Query: 242 ASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIK 301 SALMSGV++K G++G+L+V P WG ++ +G SA+LGV +ALA+ D+K Sbjct: 234 VSALMSGVLIKTGVYGLLRVTGLF---DAPPAAWGTALLVLGGASAVLGVAFALAQHDLK 290 Query: 302 RLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGA 361 RLLA+ +VENVGII+L G+A++G + +P L +GL GA H++NHALFK LLFLGAGA Sbjct: 291 RLLAYHSVENVGIIVLGAGLALLGRARGEPALVALGLGGAALHVVNHALFKSLLFLGAGA 350 Query: 362 IISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVE 421 + T +++++G LA+ M TA L+G AIS +PPLNGF+SEW + + Sbjct: 351 VQHATGTRELDQLGGLARPMRATATLFLVGAAAISGLPPLNGFVSEWLVYLGFLAAMERG 410 Query: 422 AVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLL 481 L + + LA+ GGLA CF K+ G+ F G+PR+ HA A E P M+V M +L Sbjct: 411 GDDLLAFAVLGVPALALVGGLAAACFAKVVGVVFLGSPRTAHARAAHEAPRAMLVPMAVL 470 Query: 482 AALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAM 541 AA C I L+ + + P ++ A A++ PA +A A + LLL+ Sbjct: 471 AAACAAIGLAPAAVLPALVRAASAWSRLDPAILAGDAARASAAAWRVSAVAAALLLVAGG 530 Query: 542 PLLPGLYWLWCRSRRAAFRRTGDAWACGYGWE-NAMAPSGNGVMQPLRVVFSALFRLRQQ 600 +L R A + W+CGY M +G+ + L FS R Sbjct: 531 MVLL------RRRLGAPRAPGVETWSCGYSAPTARMQYTGSSFAEALVRRFSWAIFPR-- 582 Query: 601 LDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVV 660 RL A + + P A + LA + L + L V+ Sbjct: 583 -GEPPRLGGPFPGEAAFHTEVPDTVLDLALAPGARAVRWLATQAHLLYLRRIQFQVLLVL 641 Query: 661 AALVVLLIA 669 A LV +L Sbjct: 642 ATLVAVLAW 650 >UniRef50_Q3J3E6 NADH dehydrogenase I chain L n=72 Tax=cellular organisms RepID=Q3J3E6_RHOS4 Length = 720 Score = 364 bits (936), Expect = 5e-99, Method: Composition-based stats. Identities = 140/745 (18%), Positives = 248/745 (33%), Gaps = 108/745 (14%) Query: 6 LLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFA 65 + T L+ L +L F L T+LV + I G Sbjct: 1 MATIILLAPLLGALICGFGWRLIGERAGQVIATALVFLAALLSWIIFLGFDGEMYQVVLL 60 Query: 66 PPFEFAD----LTLRMDSLSAFMVLVISLLVVVCSLYSLTYMRE-----YEGKGAAAMGF 116 E +R+D L+A M++V++ + + LYS YM + A Sbjct: 61 RWIESGSLSTEWAIRVDRLTAIMLVVVNTVSALVHLYSFGYMAHDDNWNHHEHYKARFFA 120 Query: 117 FMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSI-NAGMLYFFIAHAGS 175 +++ F +M+ L+ DN +E + ++S+ L+ K S A + F + G Sbjct: 121 YLSFFTFAMLTLVTSDNLVQMFFGWEGVGVASYLLIGFYYRKPSANAAAIKAFVVNRVGD 180 Query: 176 VLIMIAFLLMGRESGSLDFASFRTLSLSPG------------LASAVFLLAFFGFGAKAG 223 + + + S+ F A+ + +L F G K+ Sbjct: 181 FGFALGIMALFFLVDSIRFDDVFAAGPELAQTNLTFLWTEWNAANLIGVLLFIGAMGKSA 240 Query: 224 MMPLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAI 282 + LH+WLP A P+ SAL + MV G+F + +++ +++ + Sbjct: 241 QLGLHTWLPDAM-EGPTPVSALIHAATMVTAGVFLVCRMSPLY----EFAPDAKTMIVVV 295 Query: 283 GAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGAL 342 GA +A L + DIKR++A+ST +G + +A GV + A+ Sbjct: 296 GATTAFFAATVGLVQNDIKRVIAYSTCSQLGYMFVAAGVGV--------------YSAAM 341 Query: 343 FHLLNHALFKGLLFLGAGAIISRL-HTHDMEKMGALAKRMPWTAAACLIGCLAI--SAIP 399 FHL HA FK +LFLGAG++I + H DM G L ++P T A +IG LAI IP Sbjct: 342 FHLFTHAFFKAMLFLGAGSVIHAMHHEQDMRNYGGLRSKIPLTFWAMMIGTLAITGVGIP 401 Query: 400 ----PLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITF 455 GF+S+ +S + + A +L V ++ +TF Sbjct: 402 LTHIGFAGFLSKDAIIESAW-----------VGSGYAFWLLVVAACFTSFYSWRLIFLTF 450 Query: 456 CGAPRS--THAEEAQEVPNTMIVAMLLLAALCVLIALS---------------------- 491 G R + A E P M++ + +LA + Sbjct: 451 FGKERGDHHAHDHAHESPTVMLIPLGVLALGAAFSGMIWYNSFFGDHNKVATWFGIPHHA 510 Query: 492 --------------ASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLL 537 P A P A +G P + + L Sbjct: 511 EASEEGESHAEAAADHAAEPAAGATVTADEALPEAGNLAGAGEAPEPGEAEAHAEVAALG 570 Query: 538 LLAMPLLPGLYWLWCRSRRAAFRRTGDAWAC----------GYGWENAMAPSGNGVMQPL 587 + + + + A + Y + A+ + +PL Sbjct: 571 PIGAIYMGPENHVMDEAHHAPVWVKVSPFVAMLIGFGMAWLFYIAKPALPAALARSQRPL 630 Query: 588 RVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHL 647 + + + D + D + + L + + Sbjct: 631 YLFLLNKWYFDELYDVIFVRPARFLGRFFWKRGDGTVIDGTINGIALGIIPALTRLAGRV 690 Query: 648 QSGDFRLYCLYVVAALVVLLIAIAV 672 QSG Y + + +L+ + + Sbjct: 691 QSGYIFHYAFAMFLGIAILITWMTL 715 >UniRef50_B2SEW0 NADH dehydrogenase I, L subunit n=25 Tax=Proteobacteria RepID=B2SEW0_FRATM Length = 669 Score = 364 bits (935), Expect = 6e-99, Method: Composition-based stats. Identities = 133/694 (19%), Positives = 266/694 (38%), Gaps = 59/694 (8%) Query: 3 ALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSL--VGGVIGIISGITQLHAGVTL 60 A L+ ++ L +L + F + A SL + V+ +I Sbjct: 8 AAVLIAVIVLAPLLGALIAGFGGKSVKNAGVNFFTISLCGLSFVLSVILAYGVFSGAEVY 67 Query: 61 VARFAPPFEF-----ADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMG 115 F D+ ++ ++ +M+L+++ + + +YS+ YM+ EG A Sbjct: 68 SVSFYQWAPISNMFAFDVGFTVNKITVYMMLIVTFVSTLVHIYSIGYMKGEEG--YARFF 125 Query: 116 FFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDK-TSINAGMLYFFIAHAG 174 +++ F +M+ L++ +N +E + L S+ L+ ++ + A + F + G Sbjct: 126 AYISGFTFAMLCLVMGNNFLLLFFGWEGVGLFSYLLIGFYFNRDKANVASLRAFIVNRIG 185 Query: 175 SVLIMIAFLLMGRESGSLDFAS-------------FRTLSLSPGLASAVFLLAFFGFGAK 221 + ++ + + S+D+ + L +S + + L F G K Sbjct: 186 DLGFLLGIGAVILYTKSVDYTTVFAALPDIDNTQTIHFLGISFSPVTLMCSLLFIGAMGK 245 Query: 222 AGMMPLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVM 280 + PLHSWL + P+ SAL + MV G+F + +++ + + V+ Sbjct: 246 SAQFPLHSWLEGSM-EGPTPISALIHAATMVTAGVFMVARLSPMFVLSPAALSF----VL 300 Query: 281 AIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLG 340 IGAI+ L L A+ + DIKR++A+ T+ +G +++A G Sbjct: 301 IIGAITCLFMGLIAIVQTDIKRVIAYCTLSQLGYMMVAQGAG--------------AFSI 346 Query: 341 ALFHLLNHALFKGLLFLGAGAIISRL-HTHDMEKMGALAKRMPWTAAACLIGCLAISAIP 399 +FHL+ HA+FK LLFL AG++I + H D+ +MG L K MP T LIG A++A+P Sbjct: 347 GMFHLMTHAMFKALLFLAAGSVIVAMHHEQDIRRMGGLRKYMPVTYLCMLIGAWALAALP 406 Query: 400 PLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAP 459 P +GF S+ ++ A M+ + +M+ + F G Sbjct: 407 PFSGFFSKDLIIEAA-------QATTVYGHEFAYYMVLACAFVTSFYIFRMFFLVFHGKE 459 Query: 460 R--STHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASG 517 R +E P ++++ ++LLA V + + + + F NT + +G Sbjct: 460 RMSDEERSHLKESPFSILIPLILLAIPSVFVGEY--FFSSILSQEHGLFGNTITPFIQAG 517 Query: 518 IALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMA 577 + T H P+++ + + L + W W + Sbjct: 518 LGWESVTAHLANEPAIVSSMAFIKHSVTTLPF-WLAFSALVLAYVLYVWL---PAIPRLF 573 Query: 578 PSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSAT 637 + + + + + D D+ V+ + Sbjct: 574 ANAKSGFGIIYHILVKKYFIDALYDVIFVNIFLAISNFLWKVVDIFIIDKTVVNGTSNLI 633 Query: 638 QRLAKEIQHLQSGDFRLYCLYVVAALVVLLIAIA 671 + +Q G Y ++ +++ +I + Sbjct: 634 YHTGDSFRKIQRGYLFDYAFVMMVGVLLFMILLI 667 >UniRef50_Q1IZW2 NADH-quinone oxidoreductase, L subunit n=3 Tax=Deinococcus RepID=Q1IZW2_DEIGD Length = 639 Score = 364 bits (934), Expect = 8e-99, Method: Composition-based stats. Identities = 163/686 (23%), Positives = 246/686 (35%), Gaps = 97/686 (14%) Query: 16 FASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAPPFEFAD--- 72 FA L L R A L +T L V+ ++ + Q V P + Sbjct: 14 FALLILFPRLFPGRSAGWLGSLTVLASFVVAVLRYLGQTETPAHEVLWTWLPNMALNANL 73 Query: 73 -LTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVM 131 + +D LSA M L+I+ + + +YS++YM FMN F+ M+ L++ Sbjct: 74 AVGFYLDQLSALMALIITGVGFLIHVYSISYMGHDPK--FVRFFAFMNFFVGMMLILVLA 131 Query: 132 DNAFWFIVLFEMMSLSSWFLVIARQDKTSINA-------------------GMLYFFIAH 172 D+ V +E + +S+ L+ + A F + Sbjct: 132 DSYPLMFVGWEGVGTASYLLIGFWFSGRNSEAPDRKLREASDREGVANSNAARKAFIMNR 191 Query: 173 AGSVLIMIAFLLMGRESGSLDFASFRTLSLSPGLAS----AVFLLAFFGFGAKAGMMPLH 228 G + M+ L+ + G+L +A L G K+G +PL Sbjct: 192 IGDLGFMLGMFLLYKLYGTLVIPELAGRVAGAQVAQAGIELACLFLLVGAVGKSGQLPLT 251 Query: 229 SWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISA 287 +WLP A A P+ SAL + MV G++ I + W V +GA++A Sbjct: 252 TWLPDAM-AGPTPVSALIHAATMVTAGVYLIARSHFLYDLAPTASTW----VAWVGALTA 306 Query: 288 LLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLN 347 L G L AL + DIK++LA+STV +G + LAVG+ +FHLL Sbjct: 307 LYGALSALNQHDIKKILAYSTVSQLGYMFLAVGL--------------HAYSAGVFHLLT 352 Query: 348 HALFKGLLFLGAGAIISRLH-THDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFIS 406 HA FK LLFL AGA+I LH D+ MG L MP+T A L+G LAI+ IP +GF S Sbjct: 353 HAFFKALLFLSAGAVIHALHEEQDVRAMGGLRTFMPFTHLAALMGVLAIAGIPIWSGFFS 412 Query: 407 EWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEE 466 + + F+ PI V+ L + Y + + G R H Sbjct: 413 KDAILATAFTAD-----------PILYVVGLGVALLTAFYMGRWYFLVWQGDYRG-HVAH 460 Query: 467 AQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFH 526 E M V + +LAAL + AL Sbjct: 461 PHEADGLMQVPLGILAALATFGGFLNIP---------SFLGGNHAFDTSLARALPLHPHE 511 Query: 527 TQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQP 586 V+ LL LL + L GL W W RR P Sbjct: 512 LPVSTEWLLTLLAVVAGLGGLLWAWTEHRRRILAD-----------------------GP 548 Query: 587 LRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQH 646 L + L + D + A + + I + Sbjct: 549 LGAASTNALYLDRIYDSLFSIPS---RAIAEGLDVVDRGVDGTLGGIARNSVAPGGLFTR 605 Query: 647 LQSGDFRLYCLYVVAALVVLLIAIAV 672 QSG R Y + ++ +++ A+ Sbjct: 606 WQSGFVRAYAVSMLLGTALIIGYWAL 631 >UniRef50_C6NX32 Hydrogenase-4 component B / Formate hydrogenlyase subunit 3 n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NX32_9GAMM Length = 668 Score = 363 bits (932), Expect = 1e-98, Method: Composition-based stats. Identities = 206/678 (30%), Positives = 329/678 (48%), Gaps = 19/678 (2%) Query: 1 MDALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTL 60 M L W LI + ++ A L L ++ +IS L+A + Sbjct: 1 MTLPSALAWGLIAAALGPVVTILAFVPALDAKALRLGGFLTSTIMAVISLGAGLYALLQP 60 Query: 61 VARFAPPFE-FADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMN 119 + A F +D LS F +L++ ++ SL+++ Y R + + Sbjct: 61 GSIPATTFGTHIPWQFHLDPLSGFFLLLLGVVGSTASLHAIGYFRATQSGELRRVLIPYP 120 Query: 120 IFIASMVALLVMDNAFWFIVLFEMMSLSSWFLV-IARQDKTSINAGMLYFFIAHAGSVLI 178 IF ++M+ +++ + F+V +E+M+LSS FL+ A + + A LY IAH G++ + Sbjct: 121 IFFSAMILVVLAAGVYTFMVAWELMALSSTFLILSASRAMAARRAAYLYLLIAHLGALCL 180 Query: 179 MIAFLLMG----RESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRA 234 + AF+L+ GS + SLSP A+ L+ GFGAK GM+PLH WLP A Sbjct: 181 LGAFILLARGNPLSGGSFAVMAAAQQSLSPWATQAILGLSLLGFGAKLGMVPLHIWLPEA 240 Query: 235 HPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYA 294 HPAAPS SALMS M+ + I+G+L++ +L+ G+ WG++ +A G ++A GVL++ Sbjct: 241 HPAAPSPVSALMSAAMLPMAIYGLLRLDWQILSAPGIG--WGVIWLAFGLLTAGFGVLFS 298 Query: 295 LAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGL 354 + D+KRLLA+S++EN+G++L+A+G+ + ++ L + L LF LLNHALFK L Sbjct: 299 TLQSDLKRLLAYSSMENMGLVLVALGLGRIFVAEGWLSLAGLALCAGLFQLLNHALFKSL 358 Query: 355 LFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSL 414 LFLG+G+++ + DM ++G L + MP T LI LAI+ +PPLNGF SEW Q+ Sbjct: 359 LFLGSGSVLHSTGSVDMNRLGGLIRSMPQTTLLMLIATLAIAGLPPLNGFASEWLLLQAF 418 Query: 415 FSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTM 474 + + +LQ+ P+A + L+ VK +G++F G PRS A E Sbjct: 419 LLAPQAASGSLQIVLPLAAAGVVFVLALSSFAMVKGFGLSFLGRPRSNF--HAHEASLWE 476 Query: 475 IVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLL 534 AM LA CV++ + + +M + + T+ S AL P + Sbjct: 477 RTAMGCLALGCVVLGILPGMVTNGLMAVGRLLLRSDALTLQSPWALTPISAQRASYLPGT 536 Query: 535 LLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYG--WENAMAPSGNGVMQPLRVVFS 592 L+ + + ++ +W R R R AWACG+ + M S G QP +F+ Sbjct: 537 FLVGITLAVILTFLLVWWRFGR--PLRRVPAWACGFAGSATSRMQDSPAGFSQPWLRIFA 594 Query: 593 ALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDF 652 + R Q + + + PI L+K+ LQ G Sbjct: 595 PIHSGRLQTREIPEK-----RAPEWFVHFQDPFWHGLYLPIQKTALLLSKQSLRLQQGKI 649 Query: 653 RLYCLYVVAALVVLLIAI 670 +Y LY L+VLL I Sbjct: 650 TIYLLYAFITLIVLLAVI 667 >UniRef50_C5NVG1 Na(+)/H(+) antiporter subunit A n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NVG1_9BACL Length = 788 Score = 362 bits (930), Expect = 2e-98, Method: Composition-based stats. Identities = 118/552 (21%), Positives = 244/552 (44%), Gaps = 22/552 (3%) Query: 6 LLTWSLILYLFASLASLFLLGLDR-LAIKLSGITSLVGGVIGIISGITQLHAGVTLVARF 64 +L ++ L + A F + + I + IS + +++G T+ + Sbjct: 1 MLQLAVFLPVIAMFFVPFFRKNFKTIHTGKFVIVVPLILFGYFISNLKYIYSGGTIYKKL 60 Query: 65 APPFE-FADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIA 123 A D+ L +D LS L+I+ + + LYS YM + F+ IF++ Sbjct: 61 AFVSNVGLDINLNLDGLSLLFSLLITGIGTLVILYSCYYMS-ITDEKLHKFYIFLLIFMS 119 Query: 124 SMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTS-INAGMLYFFIAHAGSVLIMIAF 182 +M+ +++ DN + +EM S+SS+ L+ + + + I G VL++ Sbjct: 120 AMLGVVLSDNMLSMYMFWEMTSVSSFLLISYWHENDASRKGALKSLIITVFGGVLMLAGI 179 Query: 183 LLMGRESGSLDFASFRTLSLSPGL---ASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAP 239 ++ +GS + + + + G +L FG K+ P H WLP A A Sbjct: 180 FILNNITGSFNVSEIIEFTKNHGYNDKYVVAMILIIFGAFTKSAQFPFHIWLPDAMAAPT 239 Query: 240 SHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQD 299 +S L S MVK GI+ +L++ + +G +++ G I+ L+G + A+ +D Sbjct: 240 PISSYLHSATMVKAGIYLLLRIGIVF----SFTSSFGNILIIFGTITMLIGSISAIFLKD 295 Query: 300 IKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGA 359 +K +LA+ST+ +G++ L +G+A +GL + + FH++NHA FK LF+ Sbjct: 296 LKGILAYSTISQLGMMTLMIGIANLGLYNDNHYVYTFAFYAVCFHIINHAAFKASLFMIT 355 Query: 360 GAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSR 419 G I H+ D+EK+ + + MP + +I +++ IPPL+GF S+ Y ++ L++ Sbjct: 356 GIIDHSFHSRDIEKLRGIKRYMPLSFILSIIAGFSMAGIPPLSGFYSKEYFLTVVYGLTQ 415 Query: 420 VEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRST--HAEEAQEVPNTMIVA 477 + + I ++ + + + + + F G ++ ++ N + ++ Sbjct: 416 SSMLYM-----IIVIAVVIGALGTAIYSLIVAFKPFLGKFDNSILGNKKLHLPSNGIFIS 470 Query: 478 MLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLL 537 ++L ++ +++ I+ A T I V + +++ Sbjct: 471 PIILVVFVII----NTFIKDYIVIPAQQSALAVKITNNEVITHVHHDSFFSIELLTSIIV 526 Query: 538 LLAMPLLPGLYW 549 ++A ++ L+ Sbjct: 527 IIASFVIYKLFA 538 >UniRef50_Q52978 Probable K(+)/H(+) antiporter subunit A/B n=110 Tax=Bacteria RepID=PHAAB_RHIME Length = 999 Score = 361 bits (926), Expect = 7e-98, Method: Composition-based stats. Identities = 132/645 (20%), Positives = 242/645 (37%), Gaps = 34/645 (5%) Query: 3 ALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVA 62 A +LL+ +++ SL ++F R AI + + + +G L Sbjct: 28 AEKLLSVFILVPFAGSLIAIFFPSDQRGAISWFAGAIALVCFLVTAGLYPYVASGGVLHY 87 Query: 63 RFAP-PFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIF 121 R P + TLRMD + +I+ + V+ +LY+ YM E + F Sbjct: 88 RIDWVPELGLNFTLRMDGFAWLFSALITAIGVLVALYARYYMAEEDP--VPRFFALFLAF 145 Query: 122 IASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKT-SINAGMLYFFIAHAGSVLIMI 180 + SM+ +++ N V +E+ S+ S+ L+ + + + I G + + + Sbjct: 146 MGSMLGVVLSGNLILLAVFWELTSIVSFLLIGYWHHNAHARDGARMALTITGTGGLAMFV 205 Query: 181 AFLLMGRESGSLDFASFRTLS---LSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPA 237 +++G+ GS + + + L V +L G K+ P H WLP A A Sbjct: 206 GLIIIGKIVGSYELDAVLASGDAIRNHPLYGTVLVLVLLGALTKSAQFPFHFWLPHAM-A 264 Query: 238 APSHASA-LMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALA 296 AP+ SA L S MVK G+F +++ + W +V G + LLG +A+ Sbjct: 265 APTPVSAYLHSATMVKAGVFLLVRFWPVMAGTEA----WFWIVGLAGLTTLLLGAYFAIF 320 Query: 297 EQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLF 356 +QD+K LLA+ST+ ++G+I + + + + + + A+FH++NHA FK LF Sbjct: 321 QQDLKGLLAYSTISHLGLITVLLSLG-----------SPLAAVAAVFHIVNHATFKASLF 369 Query: 357 LGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFS 416 + AG I T D+ ++G L MP TA ++ A++ +P LNGF+S+ + Sbjct: 370 MAAGIIDHESGTRDIRRLGGLFHFMPITATLAMVASAAMAGVPLLNGFLSKEMFFAEAIE 429 Query: 417 LSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIV 476 V + + + + G AV ++ F G P + + E P M Sbjct: 430 THLVNPLDT-----VTPYVATIAGMFAVTYSLRFIHGVFFGRPPADLPRKPHEPPRWMRA 484 Query: 477 AMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLL 536 + L C+++ + + +H A +H P ++ Sbjct: 485 PLDFLVLACLVVGIIPAQTIGPFLHTA-----VLSVLREGTPDYSLSVWHGWNIPLIMSF 539 Query: 537 LLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFR 596 + L+ + + +E + + L Sbjct: 540 VALSGGIGLYFLMRSYLATAVEGPPVFRLLQGQRIFERVLVTLSWKWARWLEQRLGTRRL 599 Query: 597 LRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLA 641 Q A P R I P + + Sbjct: 600 QPQMRLLVFLALAAGASPLLLGNFELPPLVIRGIDPAFALLWAIG 644 >UniRef50_D0D447 NADH-quinone oxidoreductase subunit l n=65 Tax=cellular organisms RepID=D0D447_9RHOB Length = 762 Score = 359 bits (923), Expect = 1e-97, Method: Composition-based stats. Identities = 126/516 (24%), Positives = 219/516 (42%), Gaps = 59/516 (11%) Query: 6 LLTWSLILYLFASLASLFLLGL--DRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVAR 63 ++T L L ++ F ++ A+ L+ + ++ I +T + + R Sbjct: 1 MVTIILFAPLVGAILGGFGWKFMGEKGAMWLTTGLLFLAALLSWIVFLTLGESHTVTLFR 60 Query: 64 FA-PPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEG----KGAAAMGFFM 118 F D +R+D L+A M++V++ + + LYS YM A ++ Sbjct: 61 FIESGTLSTDWAIRIDRLTAIMLIVVTTVSALVHLYSFGYMAHDPQFEHTPYRARFFAYL 120 Query: 119 NIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSI-NAGMLYFFIAHAGSVL 177 ++F +M+AL+ DN +E + L+S+ L+ K S A + F + G Sbjct: 121 SLFTFAMLALVTSDNLVQMFFGWEGVGLASYLLIGFYYKKPSAGAAAIKAFVVNRVGDFG 180 Query: 178 IMIAFLLMGRESGSLDFASFRTLSL------------SPGLASAVFLLAFFGFGAKAGMM 225 + + + S+ F A+ + L F G K+ + Sbjct: 181 FALGIFALYYLTDSIQFDQIFAEIPRLAETQLHFLWTEWNAANLIAFLLFVGAMGKSAQL 240 Query: 226 PLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGA 284 LH+WLP A P+ SAL + MV G+F + +++ + + + +GA Sbjct: 241 FLHTWLPDAM-EGPTPVSALIHAATMVTAGVFLVCRMSPLMEYAPQATAF----ITFLGA 295 Query: 285 ISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFH 344 +A + L + DIKR++A+ST+ +G + +A GV + + A+FH Sbjct: 296 TTAFVAATIGLVQNDIKRVIAYSTMSQLGYMFVAAGVGVYSV--------------AMFH 341 Query: 345 LLNHALFKGLLFLGAGAIISRL-HTHDMEKMGALAKRMPWTAAACLIGCLAI--SAIP-- 399 LL HA FK +LFLGAG++I + H DM GAL ++P T A +IG LAI IP Sbjct: 342 LLTHAFFKAMLFLGAGSVIHAMHHEQDMRNYGALRTKIPMTFWAMMIGTLAITGVGIPLT 401 Query: 400 ---PLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFC 456 GF+S+ +S ++ ++ G A ML + ++ +TF Sbjct: 402 GWFGFAGFVSKDAIIESAWAGTQ---------GGYAFWMLVIAALFTSFYSWRLMFMTFY 452 Query: 457 GAPRSTH--AEEAQEVPNTMIVAMLLLAALCVLIAL 490 G R E A E P M++ + +LA V + Sbjct: 453 GKARGDKHTHEHAHESPRVMLIPLGVLAVGAVFSGM 488 Score = 49.1 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 13/103 (12%), Positives = 27/103 (26%) Query: 570 YGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERV 629 Y + +PL + + + D + D + Sbjct: 655 YIVNPTLPRKLAENQRPLYLFLLNKWYFDEAYDFLFVRPARAVGRIFWKRGDGNIIDGTI 714 Query: 630 IRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLIAIAV 672 + K QSG Y +V + VL+ +++ Sbjct: 715 NGIAMGIIPFFTKLAGRAQSGYIFTYAFAMVIGIAVLVTWMSI 757 >UniRef50_A9B485 Proton-translocating NADH-quinone oxidoreductase, chain L n=6 Tax=Chloroflexi (class) RepID=A9B485_HERA2 Length = 736 Score = 359 bits (923), Expect = 1e-97, Method: Composition-based stats. Identities = 149/765 (19%), Positives = 254/765 (33%), Gaps = 139/765 (18%) Query: 7 LTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVT------- 59 L W + L A+ + L+ + K S T+LV + + L ++ Sbjct: 6 LAWLIPLLPLAAFVLITLVPPIGRSRKASYTTALVLLGLATVIAWGVLAQSISEGFPNAP 65 Query: 60 ---------------------------------LVARFAPPFEFADLTLRMDSLSAFMVL 86 A F R+D + M+ Sbjct: 66 LVAAASQESASEATAEGGHAETAIPTFGNFYAKSFAWAPDGSGFFKFGYRLDGATVLMLA 125 Query: 87 VISLLVVVCSLYSLTYMREYE----GKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFE 142 +++L L+S+ YM E + + ++ +F ASM+ + + DN F + +E Sbjct: 126 MVTLAAWCIHLFSVGYMAHDEFPTGHQRQSRFFSYIALFTASMLGMTLADNLLLFFICWE 185 Query: 143 MMSLSSWFLVIAR-QDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFA------ 195 +M L S+ L+ ++ A F G V +M+ + + ++GSL F Sbjct: 186 LMGLCSFLLIGFWFFKPSAREAAKKAFITTRIGDVGMMLGMMYIYNKAGSLTFGHEPGQI 245 Query: 196 ----------SFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASAL 245 + +L AS + L F G K+ PLH WLP A P+ SAL Sbjct: 246 YNGEFLESIKTATSLIPGISAASLMAGLVFLGTVGKSAQFPLHVWLPDAM-EGPTPVSAL 304 Query: 246 -MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLL 304 + MV G+F +++ LP +V IGA +AL L A+A+ DIKR+L Sbjct: 305 IHAATMVAAGVFLVIRTFPIFAVSEVLP-----VVAFIGAFTALFAALIAVAQYDIKRIL 359 Query: 305 AWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIIS 364 A+ST+ +G ++ A+G+ + ALFHLL HA FK LLFLG+G++I Sbjct: 360 AFSTLSQLGFMVAALGIG--------------AWVAALFHLLTHAFFKALLFLGSGSVIH 405 Query: 365 RL---------HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLF 415 + D+ MG L K MP T + G A+ IPP GF S+ F Sbjct: 406 GMEATVGHDPDKAQDIRNMGTLRKFMPITFLTYMAGFFALIGIPPFAGFWSKDEIILDAF 465 Query: 416 SLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEE--------- 466 + +L L + + F G R + Sbjct: 466 LHHH----------YVVYGVLTAAAFLTAFYMTRQIVVVFFGKFRGYEPRKLAHAAAHGH 515 Query: 467 -------------------AQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFT 507 E P +M + +++L+ V + Sbjct: 516 DDHGHGDHDDHHHHHEAHDPHESPRSMTIPLIILSLFAVFAGFVNAGFLG--------IH 567 Query: 508 NTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWA 567 G+ P + ++ L+ L + R G W Sbjct: 568 WFADYVNPGGLIPKPDFMVAGIATAVALVGAGLGYLTYRNAFKNANDRDPLAGALGPIWT 627 Query: 568 CGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVT--ARAQSTEPFW 625 + + + + + + GL + + F Sbjct: 628 LLENRFYIDQIYDKTFIALTYGAGQVMNWIDRHVVDRVVNLTGLLTLFIGRINFIIDDFS 687 Query: 626 DERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLIAI 670 V I T + ++ +G + Y Y+ +V+L + Sbjct: 688 LNTVTDDIGEGTIMVGDGVRQSATGKIQDYGAYIFGGVVLLALIY 732 >UniRef50_B8IYV9 NADH dehydrogenase (Quinone) n=3 Tax=Desulfovibrio RepID=B8IYV9_DESDA Length = 682 Score = 359 bits (921), Expect = 3e-97, Method: Composition-based stats. Identities = 206/657 (31%), Positives = 322/657 (49%), Gaps = 17/657 (2%) Query: 25 LGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAPPFEFADLTLRMDSLSAFM 84 A L G G + + + G + R TL +D LS Sbjct: 27 PAGSGRAANLLGSCGAAAGCLAGLCALAFAPWGEAVSLRLPWGLPVGACTLGLDPLSRIF 86 Query: 85 VLVISLLVVVCSLYSLTYMREY--EGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFE 142 +L + L +VC+L +R + AA FF + I + ++ +A F++ +E Sbjct: 87 LLPVFGLGLVCALSGGMALRHTRPQEHNLAAHWFFYILLILGLALVMAARDAVLFMLAWE 146 Query: 143 MMSLSSWFLVIA-RQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRTLS 201 +MSL+ +FL+ D+ +A +Y AH G+V +M F+L+ + +G+ + + Sbjct: 147 LMSLAPFFLIEFNDGDRQVRDASWVYLVAAHLGAVALMAFFVLLWQSTGTTSLDILQGGA 206 Query: 202 L--------SPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKI 253 + G+ +A+F LA GFGAKAG++P+H WLP AHPAAPSH SAL+SG M+ Sbjct: 207 VMQGVARDAGSGVLTALFALAVLGFGAKAGLVPMHVWLPEAHPAAPSHVSALLSGAMINA 266 Query: 254 GIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVG 313 G++GI++ L A P WWG ++ +G + L+G+L AL + ++KRLLA+S+VEN+G Sbjct: 267 GLYGIIRSLSLLAAPGAAPEWWGWTLLLLGLATGLIGILKALGQSNLKRLLAYSSVENMG 326 Query: 314 IILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEK 373 ++L+ VG ++GL+ + + +G G+L H+LNHA FKGLLFL AG ++ T ME+ Sbjct: 327 LMLMGVGAGLIGLACGNAWIATLGFAGSLMHMLNHAGFKGLLFLSAGEVLHATGTVRMEQ 386 Query: 374 MGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAM 433 +G L KR+P AA +G AI+ +PPLNGF E SL + V Q+ +A+ Sbjct: 387 LGGLQKRLPLLGAAFALGAAAIACLPPLNGFAGELVLALSLLDGPSLPGVERQVGLLLAL 446 Query: 434 VMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSAS 493 V LA+ GLA + K YGITF G PRS A A+ + + L AA+CVL L+A Sbjct: 447 VTLALISGLAAALYAKAYGITFLGEPRSGFAANARPAGWRTLWPLALPAAVCVLGGLAAP 506 Query: 494 WLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCR 553 A P A +A + SL+ + L + L + Sbjct: 507 LFFDLASMTGLAALPMPNDMQAGALAGQEQMRASLAMVSLVGSIALGLALAGIVLRKRLL 566 Query: 554 SRRAAFRRTGDAWACGY-GWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLA 612 RR+ + W CGY G + + G +PL +F+ L+ ++ RL Sbjct: 567 KRRSVG--SMPTWGCGYQGGTARIQYTDAGFSEPLGKIFAPGMGLKVRMQLDSRLFP--- 621 Query: 613 HVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLIA 669 + S + P+ +RL + +Q G LY LY++A +V LL+ Sbjct: 622 DKGEMSVSAPDRLRRSIYDPLFEGIERLCNACKIMQHGKIHLYILYILATVVGLLVW 678 >UniRef50_C0A9K9 NADH dehydrogenase (Quinone) n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A9K9_9BACT Length = 821 Score = 358 bits (919), Expect = 4e-97, Method: Composition-based stats. Identities = 130/576 (22%), Positives = 230/576 (39%), Gaps = 25/576 (4%) Query: 3 ALQLLTWSLILYLF-ASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLV 61 L LL ++ + + L + + +V VI + T+V Sbjct: 1 MLPLLIIAIFAPFVWLPVTAFAGRWLGSRTAWFALVAPVVSTVILAALALDARAGAQTVV 60 Query: 62 ARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIF 121 P +LT +D LS F LV+S + V+ +LY+ Y+ ++ ++ +F Sbjct: 61 EIPWIPSLGLNLTFLVDGLSLFFALVVSGMGVLVALYAAAYLDDHYEWH-GRFYAYLLLF 119 Query: 122 IASMVALLVMDNAFWFIVLFEMMSLSSWFLVIA-RQDKTSINAGMLYFFIAHAGSVLIMI 180 + +M+ ++ N V +E+ ++S+ L+ + S + + + ++++ Sbjct: 120 MGAMLGTVLAGNLLLLFVFWELTGIASFLLIGFLHDKEESRSGARMALLVTGLTGLVMLA 179 Query: 181 AFLLMGRESGSLDFASFRTLSL------SPGLASAVFLLAFFGFGAKAGMMPLHSWLPRA 234 L G +G+ D A+ S GL S F+L G K+ P H WLP A Sbjct: 180 GVALTGIAAGTWDLATLLAKGGEAFGPDSRGLLSVAFVLLAVGAMGKSAQFPFHFWLPNA 239 Query: 235 HPAAPSHASA-LMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLY 293 AAP+ SA L S MVK+G+F + +V W L++ +G + L L+ Sbjct: 240 M-AAPTPVSAYLHSATMVKLGVFFVARVFPIF----SDADLWMPLLVTVGFGTMALASLF 294 Query: 294 ALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKG 353 AL D+K +LAWSTV +G+++ G+ + G+ G L H+ +H FKG Sbjct: 295 ALLSHDLKAILAWSTVTTLGMLIGFYGMGSRTGAN--------GVQGDLLHVASHVFFKG 346 Query: 354 LLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQS 413 LF+ AG I T D+ ++G L +R+PW A I +++ +P GF+S+ Y ++ Sbjct: 347 ALFMCAGIIDHATGTRDVRELGGLRRRLPWLAVVVTICAASMAGVPGTLGFVSKEYFLKA 406 Query: 414 LFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNT 473 + + + LA+T L V ++ F G E Sbjct: 407 QMAFLAQGGGGGWAIYAVGLAWLALT--LKVAFSARLVAHVFWGPLTPGATEHFHAPARL 464 Query: 474 MIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSL 533 M+V +LA CVL + +WL + + + +L Sbjct: 465 MLVPPAILAVACVLFGVWPAWLGAGLDRLGVTGLQAAETLSLHALPSQWAPEVGLSLAAL 524 Query: 534 LLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACG 569 ++ + L G + R +A G Sbjct: 525 VIGGGVFAVLGRGRWARLSIPRWLRLDLAFEAGVEG 560 >UniRef50_D2RZ77 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Haloterrigena turkmenica DSM 5511 RepID=D2RZ77_9EURY Length = 681 Score = 358 bits (918), Expect = 5e-97, Method: Composition-based stats. Identities = 137/693 (19%), Positives = 249/693 (35%), Gaps = 61/693 (8%) Query: 3 ALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVA 62 + L A + SL + GI + ++ + + +G T Sbjct: 8 PFSYAPAIALFPLAAFVISLVFGRQLPKKGAIPGIFATAASLLFSLWMFATVASGETYHE 67 Query: 63 RFAPPFEF------------ADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKG 110 L +D LSA M++++SL+ + ++SL YM + G Sbjct: 68 TLYEWSAGAVTTEVGAEEIAFSFGLLIDPLSALMLIIVSLVAFLVHVFSLGYMNDEGETG 127 Query: 111 AAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIAR-QDKTSINAGMLYFF 169 + +F SM+A + DN + FE++ L S+ L+ + K++ +A F Sbjct: 128 LPRYYASLGLFTFSMLAFVYADNLLMAFMFFELVGLCSYLLIGFWFRTKSAPSAAKKAFL 187 Query: 170 IAHAGSVLIMIAFLLMGRESGSLDFASFRTLSLSP----------------GLASAVFLL 213 + G +I + + G++ FA + ++ + LL Sbjct: 188 VTRFGDYFFLIGVVAIASTFGTVAFAGEESFVVAAETAIEDGTTLFGFDAQTWVTITGLL 247 Query: 214 AFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPL 273 G K+ PLH+WLP A + ++ + + MV G++ + + + L Sbjct: 248 VLGGVIGKSAQFPLHTWLPDAMEGPTTVSALIHAATMVAAGVYLVAR----MFGYYALSP 303 Query: 274 WWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLL 333 ++ +G +AL + + DIK++LA+ST+ G ++L +GV Sbjct: 304 TALAIIAFVGGFTALFAATMGVVKDDIKQVLAYSTISQYGYMMLGMGVG----------- 352 Query: 334 TVVGLLGALFHLLNHALFKGLLFLGAGAIISRL-HTHDMEKMGALAKRMPWTAAACLIGC 392 G + +FHL+NHA FK LLFLG+GA+I + H DM KMG L + P T L G Sbjct: 353 ---GYVAGVFHLMNHAFFKALLFLGSGAVIVLMHHEQDMWKMGGLKDKAPVTYYTFLAGA 409 Query: 393 LAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYG 452 LA++ I P +GF S+ + E V L A M + +M Sbjct: 410 LALAGIVPFSGFWSKDEVLFDALIVGLEEPVILA-----AYAMGLLGVFFTGFYTFRMVF 464 Query: 453 ITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPA 512 +TF G PRS AE V ++ +++L L L K+ F Sbjct: 465 LTFHGEPRSETAENPHGVGWSIKAPLVVLGLLAALAGFVNLAPIAKLAGTDITFLEYWLD 524 Query: 513 TVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGW 572 + + + ++ + + L A + Sbjct: 525 GEYGYVEGLTYHHYHEMVAFEEGYIGSETTTMLLSAGLSLGLALAGAFTAHTLYNVPEPK 584 Query: 573 ENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRP 632 +A G V + + + A + + + Sbjct: 585 RHATKLGGA------YTVLRHNYYQDEY--QVWLAEGLTLPLARTADLFDRSVIDGAVDG 636 Query: 633 IVSATQRLAKEIQHLQSGDFRLYCLYVVAALVV 665 + SA+ + ++ +Q+G Y +VA + Sbjct: 637 VSSASLFGSSWVKRIQTGLVTNYAALLVAGFIA 669 >UniRef50_Q6GBK7 Putative antiporter subunit mnhA2 n=63 Tax=Staphylococcus RepID=MNHA2_STAAS Length = 800 Score = 358 bits (918), Expect = 6e-97, Method: Composition-based stats. Identities = 127/587 (21%), Positives = 241/587 (41%), Gaps = 21/587 (3%) Query: 4 LQLLTWSLILYLFASLASLFLLGLD--RLAIKLSGITSLVGGVIGIISGITQLHAGVTLV 61 + L+ + + + ++ L + A ++ + ++ + +I + Sbjct: 1 MSLVYLLIAILVIMAMILLMSKRRALAKYAGYIALVAPVISSIYFLIQIPSVAKLQYLST 60 Query: 62 ARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIF 121 + +L LR+D LS L+ISL+ + Y+ Y+ + F++ +F Sbjct: 61 SIPWIKTLDINLDLRLDGLSLMFSLIISLIGIAVFFYATQYLSSRKD-NLPRFYFYLTLF 119 Query: 122 IASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQD-KTSINAGMLYFFIAHAGSVLIMI 180 + SM+ +++ DN + +E+ S+SS+ L+ + S M F I G + +++ Sbjct: 120 MFSMIGIVLSDNTILMYIFWELTSVSSFLLISYWYNNGDSQFGAMQSFMITVFGGLALLV 179 Query: 181 AFLLMGRESGSLDFASF---RTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPA 237 F+++ +G+ + + GL + + G K+ P H WLPRA A Sbjct: 180 GFIMLYIMTGTNNITEILGQADHIKNHGLFIPMIFMFLLGAFTKSAQFPFHIWLPRAM-A 238 Query: 238 APSHASA-LMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALA 296 AP+ SA L S MVK GIF +L+ L GL + +V +G I+ L G + AL Sbjct: 239 APTPVSAYLHSATMVKAGIFLLLRFTPLL----GLSNMYVYIVTFVGLITMLFGSITALK 294 Query: 297 EQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVV---GLLGALFHLLNHALFKG 353 + D+K +LA+ST+ +G+I+ VG+ + + L GALFHL+NHA+FK Sbjct: 295 QWDLKGILAYSTISQLGMIMAMVGIGGGYAQHQQDAIASIYVFVLFGALFHLMNHAIFKC 354 Query: 354 LLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQS 413 LF+G G + + D+ + + + P I L+++ +P LNGF+S+ + Sbjct: 355 ALFMGVGILDHEAGSRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDA 414 Query: 414 LFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRST--HAEEAQEVP 471 L ++ +L I V + + M F S + E P Sbjct: 415 LTQTGQLSQFSLISMIAIVFV-GVIASVFTFTYALYMVKEVFWTKYDSKVFTKKNIHE-P 472 Query: 472 NTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTP 531 + L+L L +I + I+ +A + + V + Sbjct: 473 WLFSLPSLILMVLVPVIFFVPNIFGKGIIVLALRAVSGGNHQIDQLAPHVSQWHGFNIPL 532 Query: 532 SLLLLLLLAMPLLPG-LYWLWCRSRRAAFRRTGDAWACGYGWENAMA 577 L ++++L +L + W + + ++ Y A Sbjct: 533 LLTIIIILLGSVLAIKVDWKKVFTGKIRQISVSKSYEMVYRHFEKFA 579 >UniRef50_UPI00003845F5 COG0651: Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI00003845F5 Length = 581 Score = 357 bits (917), Expect = 7e-97, Method: Composition-based stats. Identities = 185/521 (35%), Positives = 281/521 (53%), Gaps = 7/521 (1%) Query: 37 ITSLVGGVIGIISGITQLH--AGVTLVARFAPPFEFADLTLRMDSLSAFMVLVISLLVVV 94 ++ + + GI L G + R+D+LSA ++V++L Sbjct: 4 FCCMIASLALLAGGIKHLGQTPGTGPAIILPIGLPWLAAHFRLDNLSALFMVVVNLASAA 63 Query: 95 CSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIA 154 S Y + Y + F +F+ M +L+ D+AF F+V +E MSLSSW LV+A Sbjct: 64 ASAYGIGYCSHLPEPR--RVTPFYPLFLFGMNTVLIADDAFMFLVAWEFMSLSSWLLVLA 121 Query: 155 RQ-DKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRTLSLSPGLASAVFLL 213 + + A +Y +A G+ ++ F LM G+ F++ R L V LL Sbjct: 122 DHKNAENRRAAFVYLVMACFGTFCLLTCFGLMAGGEGAYSFSAMRAAKLDGIAGFLVVLL 181 Query: 214 AFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPL 273 A G G+KAG++PLH+WLP AHPAAPSH SALMSGVM K+ ++G++++ DL + Sbjct: 182 ALLGAGSKAGLVPLHAWLPLAHPAAPSHVSALMSGVMTKVALYGLIRILFDLHGH--VNW 239 Query: 274 WWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLL 333 WG +M IG I+A++GVLYA+ + D+K+LLA+STVEN+G++++ +G+A+ + L Sbjct: 240 AWGAAMMVIGGITAVMGVLYAILQDDLKKLLAYSTVENIGVVVIGLGLAIAFKGSGEKTL 299 Query: 334 TVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCL 393 + L+ L+H++NH++FK L FL AGA+I+ D+ K+G L KRMPW A L+G + Sbjct: 300 AALALVAGLYHIVNHSIFKTLWFLSAGAVITATGERDLGKLGGLTKRMPWNGVAALVGAI 359 Query: 394 AISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGI 453 AISA+PPLNGF+SEW +QSLF + A++ P+ MLA+ LA CFV+ YGI Sbjct: 360 AISALPPLNGFVSEWLIFQSLFKGPSLPHWAMKFGVPVVGAMLALAAALAAACFVRAYGI 419 Query: 454 TFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPAT 513 F G PRS A +A +VP TM + LLA LCV++ + + H+ T A Sbjct: 420 AFLGRPRSEAAAQAHQVPATMRWTVALLAVLCVVLGAIPVTITDALSHVVTPLTGVSFAV 479 Query: 514 VASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRS 554 A + +L++ L + L Sbjct: 480 SADLGWPWLSPVSSTRGSYSGTVLVMTGAGLCAITLLLVHG 520 >UniRef50_C8XAR9 NADH/Ubiquinone/plastoquinone (Complex I) n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XAR9_NAKMY Length = 674 Score = 356 bits (915), Expect = 1e-96, Method: Composition-based stats. Identities = 214/651 (32%), Positives = 324/651 (49%), Gaps = 11/651 (1%) Query: 28 DRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAPPFEFADLTLRMDSLSAFMVLV 87 L GI VGG+ +++GI + G T+ L +D L + V Sbjct: 27 RPYRPTLVGIGLAVGGLAALVAGIAAMQ-GQTVTWAAPHLLPLFGLLFTVDPLGGVFLAV 85 Query: 88 ISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLS 147 + LY + Y RE+ G A + + +F+ +M+ + + + ++++E+M+L+ Sbjct: 86 TGGVSAAVGLYGIGYCREH-GLDARGVQAVLPLFVLAMMLVPLAASVGTLLLVWELMALT 144 Query: 148 SWFLVI--ARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRTLS--LS 203 S LV+ R+ +AG Y + H G V I+I L+ + FA+ R + LS Sbjct: 145 SLLLVVAEHRRRPEVASAGRWYAVMTHLGLVAILIGLLVFAAHAADGSFAALRAAAPGLS 204 Query: 204 PGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAM 263 P +A VF+ GFG+KAG++PLH+WLPRAHP APS+ SALMS MV +GI+GI++V Sbjct: 205 PAVAGLVFVATGIGFGSKAGIVPLHAWLPRAHPEAPSNVSALMSAAMVNLGIYGIVRVGF 264 Query: 264 DLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAM 323 DLLA WW +LV+ +GA SA+ G+L A ++KRLL ST EN+G++L+ VG A Sbjct: 265 DLLAGADTGWWW-LLVLGLGAGSAIYGILQAAVGTNLKRLLGNSTTENMGLVLIGVGAAG 323 Query: 324 VGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPW 383 + +P L + L AL HL+NHA FK +LF AGA+++ D++ +G L RMP Sbjct: 324 FFGTTGNPPLAGLALAAALLHLVNHAAFKTVLFQAAGAVVAATGRRDLDDLGGLNTRMPA 383 Query: 384 TAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLA 443 T A IG LA SA+PP F+SEW Q+L VA + P+A+ +A+T GLA Sbjct: 384 TTTAFGIGALAASALPPGAAFVSEWLLLQALIHGLPAAGVAGAIVLPLAVAAVALTAGLA 443 Query: 444 VMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIA 503 V FVK +GI F PR+ AE A E P TM+ M L A CV +AL+ + + P + +A Sbjct: 444 VATFVKAFGIGFLAKPRTVEAERATERPATMLAGMGLAATACVALALAPTLVLPTLGAVA 503 Query: 504 HAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTG 563 A P G+ + ++P +L L LL ++ + R Sbjct: 504 GATVGAPDPVQVQGLTIELVGVAGSLSPLMLTLALLLGMVVALAGVRALAT--RRQARAA 561 Query: 564 DAWACGYGW-ENAMAPSGNGVMQPLRVVFSALFRLRQQLDPT-LRLNKGLAHVTARAQST 621 W CG G M + +PL+ VF + R +D T + L + Sbjct: 562 RLWDCGGGPLSARMEYTATSFAEPLQRVFDDVVRAEHDIDVTHHDEARYLVQQIEYRRRV 621 Query: 622 EPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLIAIAV 672 + R+ +P++ A + + L +G Y A L LLI + V Sbjct: 622 PDRIERRLYQPVLQAVAAWGRAGRRLSTGSVHRSLGYGFATLCGLLILLVV 672 >UniRef50_Q34313 NADH-ubiquinone oxidoreductase chain 5 n=6 Tax=Eukaryota RepID=NU5M_DICDI Length = 670 Score = 356 bits (913), Expect = 2e-96, Method: Composition-based stats. Identities = 125/688 (18%), Positives = 253/688 (36%), Gaps = 73/688 (10%) Query: 6 LLTWSLILYLFASLASLFLLGL--DRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVAR 63 + +LIL L S+ + +R++IK++ ++ + + G L + + Sbjct: 1 MYIVNLILPLIGSIITGIFGHKLGNRISIKIAVGCMMLTAISSLYIGYEILLCNSVVHFK 60 Query: 64 FAPPF----EFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMN 119 + L DSL++ M++VI+ + + LYS+ YM+E K +++ Sbjct: 61 LGTWMQVGSLNVEYGLLYDSLTSIMIIVITCISSMVHLYSMDYMKEDPHK--TRFFSYLS 118 Query: 120 IFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDK-TSINAGMLYFFIAHAGSVLI 178 +F M+ L+ DN +E + + S+ L+ + + + + + G + Sbjct: 119 LFTFFMMLLVTADNFVQLFFGWEGVGIMSYLLINFWYTRLQANKSALKAVILNRFGDFGL 178 Query: 179 MIAFLLMGRESGSLDFASFRTLSL------------SPGLASAVFLLAFFGFGAKAGMMP 226 LL+ S+DF+ T++ + + G K+ + Sbjct: 179 FFGILLVFLVFKSVDFSVIFTIAPFITEYTINLLGYEVNAITLIGSFIVIGVVGKSAQLG 238 Query: 227 LHSWLPRAHPAAPSHASA-LMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAI 285 LH WLP A P+ SA L + MV G+F +L+ + L + ++ IGA+ Sbjct: 239 LHMWLPDAM-EGPTPVSALLHAATMVTAGVFLVLRTSPLL----SYSITILNILTIIGAL 293 Query: 286 SALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHL 345 + L + + DIKR++A+ST +G ++ A G+ + +++HL Sbjct: 294 TTLFATTIGIVQNDIKRVIAYSTCSQLGYMIFACGL--------------LNYNASIYHL 339 Query: 346 LNHALFKGLLFLGAGAIISRLH-THDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGF 404 HA FK LLFL AG++I L+ DM KMG L MP T LIG LA++ P L+G+ Sbjct: 340 TTHAFFKALLFLSAGSVIHGLNDEQDMRKMGGLVNLMPLTYQCMLIGTLALTGFPFLSGY 399 Query: 405 ISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHA 464 S+ ++ ++ E A ++ V ++ +TF PR + Sbjct: 400 YSKDIILETSYATYYWEGT-------FAAIIGYVAAFGTTFYSFRLLILTFFNKPRMQYK 452 Query: 465 --EEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVP 522 E M++ +++LA + I + + + Sbjct: 453 TIAGVHEASTNMVIPLVILALCSIFIGYVTKDFFVGLGTPVWNNSFFAYPYNNLILESEV 512 Query: 523 GTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNG 582 ++ P + + P+L R N Sbjct: 513 LQRELKLLPLFAFIYGVITPVLFYFNIKEDRMINVKQ---------------------NL 551 Query: 583 VMQPLRVVFSALFRLRQQLDPTLRLNKGLAH-VTARAQSTEPFWDERVIRPIVSATQRLA 641 +++ F + + + + W++ + + + Sbjct: 552 MVKESYFFFVKKWYFDFLSRVLIVVPFFHLSYDVMNKNLDKGLWEKIGVTGVATTLVTAF 611 Query: 642 KEIQHLQSGDFRLYCLYVVAALVVLLIA 669 ++ Y Y+V ++++++ Sbjct: 612 TALKLKNEITLSTYISYIVQTIILIIVV 639 >UniRef50_C4V3R7 NADH dehydrogenase (Quinone) n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V3R7_9FIRM Length = 634 Score = 356 bits (913), Expect = 2e-96, Method: Composition-based stats. Identities = 146/684 (21%), Positives = 262/684 (38%), Gaps = 88/684 (12%) Query: 3 ALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTL-- 60 L L + + F L+ ++ + + + + ++ +T+ Sbjct: 6 LTHAYLIPLFPALAFLIIAPFTRREKNLSATIAIVMMALAFAFSVFVALAAVNYQITMGD 65 Query: 61 -----VARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMG 115 + + +D L+A M+++++L+ ++ +YS++YM EG G Sbjct: 66 PYVMKTVWAHIGAVELSMGVLIDPLTALMLVIVTLVSLLVYIYSVSYMEHDEGMG--RFF 123 Query: 116 FFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDK-TSINAGMLYFFIAHAG 174 F+++F A+M+ L+V N V +E + L S+ L+ DK ++ A F G Sbjct: 124 AFISLFSAAMLGLVVSVNFLQLYVFWEGVGLCSYLLIGFYYDKVSAREAAKKAFITTRIG 183 Query: 175 SVLIMIAFLLMGRESGSLDFASFRTLSL------SPGLASAVFLLAFFGFGAKAGMMPLH 228 +++ LL+ G++DF R + G + + LL F G K+G PLH Sbjct: 184 DFGMLVGILLVQVSFGTMDFIELRLMMPAYVLVAGTGYLTVIGLLLFMGPIGKSGQFPLH 243 Query: 229 SWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISA 287 WL A P+ SAL + MV G+F + + + +GA +A Sbjct: 244 VWLLDAM-EGPTPTSALIHAATMVAAGVFLVARAFFIF----SECPLVMNFIAGLGAFTA 298 Query: 288 LLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLN 347 L + A+ ++ K +LA+ST+ +G ++LAVG+ ++FHL+ Sbjct: 299 LFAAVIAVTQRRFKAVLAYSTISQLGYMMLAVGIG--------------AFSASMFHLMT 344 Query: 348 HALFKGLLFLGAGAIISRLH-THDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFIS 406 HA FK +LFL AGA++ LH D+ KMG L K+MP T LIG LAIS IPP +GF S Sbjct: 345 HAFFKAMLFLCAGAVMHALHDETDITKMGGLWKKMPLTFVTMLIGVLAISGIPPFSGFFS 404 Query: 407 EWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEE 466 + + S +M T L ++ + F G RS H E Sbjct: 405 KDEILAAAMHASTP-----------LYLMATFTSFLTAFYMARLLIVAFLGESRSEH--E 451 Query: 467 AQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFH 526 A EV M M++LA L ++ L + + A A + Sbjct: 452 AHEVDAFMRWPMIMLALLTIVSGLWGYFGGFSMWIYADAPHHEAID-------------- 497 Query: 527 TQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQP 586 + + L + R R + G+ Sbjct: 498 ------WTVAGTSTVLALLAFAAAYQIYGRHRLRAAMQQRSFGF---------------- 535 Query: 587 LRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQH 646 L V F + + + + + + + ++ + + +++ + Sbjct: 536 LYRVVYNKFYVDELY--GYFRERFVYGTAVILKWVDEKIFDGIMNGLGAYGLAMSEVLTE 593 Query: 647 LQSGDFRLYCLYVVAALVVLLIAI 670 +G + Y + +V+LL Sbjct: 594 NVNGQAQRYVVVFYTGVVILLCYA 617 >UniRef50_Q2YA95 Proton-translocating NADH-quinone oxidoreductase, chain L n=64 Tax=Bacteria RepID=Q2YA95_NITMU Length = 662 Score = 356 bits (913), Expect = 2e-96, Method: Composition-based stats. Identities = 153/673 (22%), Positives = 249/673 (36%), Gaps = 61/673 (9%) Query: 7 LTWSLILYLFASLASLFLLGLDRLAIKLS------GITSLVGGVIGIISGITQLHAGVTL 60 L W + A L L G ++ S + ++ I IT G Sbjct: 4 LLWLIPTLPLAGFLLLVLGGNHLGHRSIAMIGTGSVALSALVAILIGIDFITAPPPGFVF 63 Query: 61 VARFAPPFEFADLT----LRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGF 116 A + +D+LS MV+V++++ + LYS +M EG A Sbjct: 64 RQEAWTWIAVAGFSPGIVFYLDALSLVMVVVVTVISFLIHLYSTEFMSGDEG--YARFFA 121 Query: 117 FMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSI-NAGMLYFFIAHAGS 175 +MN+F+ SM L++ DN + + +E + L S+ L+ + A F + G Sbjct: 122 YMNLFVGSMCILVLADNLLFLYLGWEGVGLCSYLLIGFWYRDPANGRAARKAFIVTRVGD 181 Query: 176 VLIMIAFLLMGRESGSLDFASFRTL-----SLSPGLASAVFLLAFFGFGAKAGMMPLHSW 230 + I F L+ G+LD + LA L G K+ +PL +W Sbjct: 182 TAMAIGFFLLFTHLGTLDIQPLMQRATQEWPVGSELAILAAALLLGGAAGKSAQLPLQTW 241 Query: 231 LPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALL 289 LP A A P+ SAL + MV G++ I + + L V A+GA++ LL Sbjct: 242 LPDAM-AGPTPVSALMHAATMVTAGVYLIARTHALFV----LAPAVQFAVAAVGALTLLL 296 Query: 290 GVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHA 349 ALA+ DIKR+LA+ST+ +G + LA+GV A+FHL+ HA Sbjct: 297 AGFSALAQNDIKRVLAYSTISQLGYMFLALGVG--------------AWSAAIFHLVTHA 342 Query: 350 LFKGLLFLGAGAIISRLH-THDMEKMGALAKRMPWTAAACLIGCLAISAIPP-LNGFISE 407 FK LLFL AG +I LH HD+ +MGAL K++P T LIG +++A+P GF S+ Sbjct: 343 FFKALLFLSAGVVIMSLHEEHDIFRMGALRKKLPVTFWTFLIGSASLAALPLVTAGFYSK 402 Query: 408 WYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEA 467 +S + P L + ++ + F G R+ E Sbjct: 403 DLILWQAWSS--------RGGNPWLWAAGWGGAILTGLYIFRVVFLVFFGEARTVAPPEI 454 Query: 468 QEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHT 527 + + V +++LAA V+ I + T + H Sbjct: 455 RRPGRRITVPLIVLAAFSVVGG--------WIETPSFLGNLTLFSDFIQHALPPTQVVHD 506 Query: 528 QVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPL 587 ++L LL L + + R G + G G Sbjct: 507 SKNDEIVLELLAIAASLGSIALAYLLFLRYPAFLHGLMLVPALASIRKLWHFGWGFDSFY 566 Query: 588 RVVFSALFRL-----RQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAK 642 +F + ++ + L + + + + + + Sbjct: 567 EFLFVRPYLWLAHADQRDVIDDLYRMSFSCTLRCLQKINRHDLIDNLYSGLAGLCLFFHR 626 Query: 643 EIQHLQSGDFRLY 655 + QSG R Y Sbjct: 627 TLSATQSGQVRRY 639 >UniRef50_A9A3Z7 Proton-translocating NADH-quinone oxidoreductase, chain L n=4 Tax=Thaumarchaeota RepID=A9A3Z7_NITMS Length = 692 Score = 356 bits (913), Expect = 2e-96, Method: Composition-based stats. Identities = 140/700 (20%), Positives = 255/700 (36%), Gaps = 72/700 (10%) Query: 12 ILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAP-PFEF 70 IL A+L + + + A + + + S + + + Sbjct: 22 ILPFAAALIMPGIGKISKRATGYVAVGFALMSALSAASLLPVAIEASEIHHQIMWIEAIG 81 Query: 71 ADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLV 130 + D LS M V++ + + +YS YM+ + F+M FI SM +++ Sbjct: 82 LKGGVLADPLSVIMANVVAWISFLIMIYSTGYMKGDKD--ITRFWFWMMFFIGSMQIIVL 139 Query: 131 MDNAFWFIVLFEMMSLSSWFLVIARQDKTSI--------------------NAGMLYFFI 170 DN +E + L+S+ L+ +AGM F + Sbjct: 140 SDNLLQVFFGWEGVGLASYALISFWYRDKKKDHVGQEGRTVLGLLDYYAPTHAGMKAFIM 199 Query: 171 AHAGSVLIMIAFLLMGRESGSLDFASFRT------LSLSPGLASAVFLLAFFGFGAKAGM 224 G V+++ LL+ +G+ F + G+ F+L F G K+ Sbjct: 200 TKVGDVMMIAGMLLIFLFAGTFGFKELMGDHEWAIAMNAQGMLVPAFVLLFGGAIGKSAQ 259 Query: 225 MPLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLW---WGILVM 280 PL+ WL A P+ SAL + MVK G+F + ++ + A + + +V Sbjct: 260 FPLNEWLLEAMT-GPTAVSALIHAATMVKAGVFLVARIGPIVFALGAAGIMADQFFEIVA 318 Query: 281 AIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLG 340 +GAI+ALL + +IK++LA+ST +G +++A+GVA + D G Sbjct: 319 WVGAITALLLATQGMVNPEIKKVLAYSTGSQIGYMMMALGVAGLSHQYVD------GYTA 372 Query: 341 ALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPP 400 FHL++HA+FK LF+ AG+++ + + M MG L K M T A L + P Sbjct: 373 GFFHLISHAMFKASLFMAAGSLLHIVGSRFMTDMGGLRKHMKKTYAFMWAAGLGLMGAPF 432 Query: 401 -LNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAP 459 GF S+ + ++++ A+ + +T + +M G+ F G Sbjct: 433 ITTGFWSKDAIFAAVYTSGNEWALP-------LFAIAVLTAIITAFYTTRMIGMVFFGNK 485 Query: 460 R------STHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPAT 513 E +M +LA L + I L + H+ + Sbjct: 486 SKHIQKMEEEGHHIHEASLSMWAPYGILAVLTIGIGLIGLSTEHGLHHMFEVYLEDSFGI 545 Query: 514 ---VASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGY 570 A A + F + P L L+A + GL +++ R + Sbjct: 546 HSEHAKAEASILPEFLKGINPVALGASLVAFAIGIGLGYIFYIGRWVDPVK--------- 596 Query: 571 GWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVI 630 + N + V + + L + + + D + Sbjct: 597 ------FVNSNIFFYAIHKVILSRWYLNAIVYWCFVIAPLWLARGVFRYFEKTAIDYGMN 650 Query: 631 RPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLIAI 670 AT AK +Q Q+G + Y A L+ +++ + Sbjct: 651 DGFQKATAWGAKVVQGTQTGVSQSYLFVFGAGLLFVVLIL 690 >UniRef50_Q466B6 F420H2 dehydrogenase subunit L n=5 Tax=Methanosarcinales RepID=Q466B6_METBF Length = 667 Score = 355 bits (912), Expect = 3e-96, Method: Composition-based stats. Identities = 136/700 (19%), Positives = 271/700 (38%), Gaps = 77/700 (11%) Query: 7 LTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAP 66 L+ L + F + + + VI ++ + L ++++ P Sbjct: 6 FLIPLLPALAFVITFFFGRKMPSGGAIVPILAIAASFVISLMITLRLLANPDEVISQSYP 65 Query: 67 PFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMV 126 F ++ + +D L+A M+ ++S + ++ +Y+++YM G+ A +F A+M+ Sbjct: 66 WFAVLNIGVLIDPLAAVMLSMVSFVSLLIHIYAVSYMSGDPGE--ARYFAETALFTAAML 123 Query: 127 ALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLY-FFIAHAGSVLIMIAFLLM 185 +L++ DN V +E++ L S+ L+ ++ S A F G V+ + +++ Sbjct: 124 SLVLSDNILQLFVSWELVGLCSYLLIGFWFERPSAAAAAKKAFLTTRIGDVMFLTGIIVL 183 Query: 186 ---------GRESGS--LDFASFRTLSLSPGLA------------SAVFLLAFFGFGAKA 222 G + G+ L F + + + LL F G K+ Sbjct: 184 TSDILKLAGGFQDGTYLLRFDEIFSYIPQLSALQTNIFGFEVSHLTIITLLFFGGAVGKS 243 Query: 223 GMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAI 282 G PLH WLP A + ++ + + MV G++ + + +A ++V + Sbjct: 244 GQFPLHVWLPDAMEGPTTVSALIHAATMVTAGVYLVARTFPMFIAAPDS----LMVVAYL 299 Query: 283 GAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGAL 342 G +AL + D+KR+LA+ST+ +G ++L +G+ + + + +L Sbjct: 300 GGFTALFAGTMGIVMNDLKRVLAYSTISQLGYMMLGLGLG--------SAIGLEAIGISL 351 Query: 343 FHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAIS--AIP- 399 FHL+NHA FK LLFL AG++I + T DM ++G + K MP TAA I LA++ IP Sbjct: 352 FHLINHAFFKALLFLCAGSVIHAVGTQDMRELGGVRKVMPVTAATMAIAALALAGFGIPG 411 Query: 400 ---PLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFC 456 +GF S+ ++ + I L + ++ +TF Sbjct: 412 TSIGTSGFFSKDAIIEAAYLFGENSN------NWIPYAFSIAAALLTSIYIFRLIFMTFT 465 Query: 457 GAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASW----LAPKIMHIAHAFTNTPPA 512 G PRS + E P M + + +LA ++ + N Sbjct: 466 GKPRSDY--HGHESPAIMTIPLSILAIFSLVFGGLTKTGFMNFLEETFANGFVNLNIGGL 523 Query: 513 TVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGW 572 LV + L +++ L + R + Sbjct: 524 AALGRNELVGTAGSESLFVQWLPMIVAVAGLAVAFVIYYLRIIKLGPL------------ 571 Query: 573 ENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRP 632 + P+ + + + L + V A + ++ Sbjct: 572 --------ASMKNPVYRLLYKRYYQHKIYTEFFSL-GIVYGVIALLSQVLDVIIDSIVEG 622 Query: 633 IVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLIAIAV 672 I T +++E++ +Q+G + Y + V+A + +L+I + + Sbjct: 623 IGILTVGVSEELRRVQTGVVQTYAIVVIAGVSLLIILVKL 662 >UniRef50_A1SE38 Proton-translocating NADH-quinone oxidoreductase, chain L n=5 Tax=Actinomycetales RepID=A1SE38_NOCSJ Length = 643 Score = 355 bits (912), Expect = 3e-96, Method: Composition-based stats. Identities = 144/680 (21%), Positives = 250/680 (36%), Gaps = 78/680 (11%) Query: 5 QLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHA-------- 56 LL + L L + L L G V I + L Sbjct: 22 SLLWLVVALPLAGAAILLVGGRYTDKWGHLLGTLLPVVSFILSLVLFFDLLGRDEGDRQF 81 Query: 57 GVTLVARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGF 116 + F + L D LSA +L+I+ + + +YS+ YM + Sbjct: 82 NQHVFTWFQTGHLDVGMDLLYDPLSALFLLLITGVGSLIHVYSIGYMAHDPRRR--RFFG 139 Query: 117 FMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAG-MLYFFIAHAGS 175 ++N+F+A+M+ L++ +N + +E + L+S+ L+ Q + S A F I G Sbjct: 140 YLNLFVAAMLLLVLSENYLGLFLGWEGVGLASYLLIGFWQHRPSAAAAGKKAFVINRVGD 199 Query: 176 VLIMIAFLLMGRESGSLDFASFRTLSL--SPGLASAVFLLAFFGFGAKAGMMPLHSWLPR 233 + + A ++ GS F + S + + LL G AK+ PL +WL Sbjct: 200 MGMSTAIMMFYVTFGSTSFTVISANAPGASDTQLTILGLLLLLGACAKSAQFPLQAWLLD 259 Query: 234 AHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVL 292 A P+ SAL + MV G++ I++ V+ + IS L G Sbjct: 260 AM-EGPTPVSALIHAATMVTAGVYLIVRSNFIF----EAAPHAQTAVVVVALISILWGAA 314 Query: 293 YALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFK 352 A+ DIK+ LA ST+ +G ++ L G A+FHLL H FK Sbjct: 315 IGCAKDDIKKGLAGSTMSQIGYMM------------LGAGLGAAGYAFAIFHLLTHGFFK 362 Query: 353 GLLFLGAGAIISRLHTH-DMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTW 411 +FLGAG+++ ++ DM GAL K MP T +G LAI P +GF S+ Sbjct: 363 ANMFLGAGSVMHGMNDDVDMRHYGALRKMMPVTFLTFAMGYLAIIGFPGFSGFWSKDKII 422 Query: 412 QSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRS-THAEEAQEV 470 ++ + + + + + G+ +M +TF G R E Sbjct: 423 ETALADN-----------WLVGLCAIIGAGVTGFYMTRMMLMTFFGDDRRWEKDVHPHES 471 Query: 471 PNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVT 530 P+ M V +++LAAL VL L +A + A V A + Sbjct: 472 PSVMTVPLVVLAALSVLGGLM----------LAGDWIQDFLAPVVGVGAHDDPPVPALLV 521 Query: 531 PSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVV 590 +++++++ A L + + R A + + V+ P R + Sbjct: 522 TAIIVVVVGAGVALAWMLFGRREIPRTAPQDVSFVTRAAREELYGNQINDGLVVNPGRHL 581 Query: 591 FSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSG 650 L + + + A A + +Q+G Sbjct: 582 VGGLLTIDKH------------------------VIDGTFTGGPVALGSFAGVARRVQNG 617 Query: 651 DFRLYCLYVVAALVVLLIAI 670 R Y L ++ +++++A+ Sbjct: 618 FVRTYALSLLGGALIVVLAL 637 >UniRef50_C2BM70 CPA3 family monovalent cation:proton (H+) antiporter-3 subunit A n=5 Tax=Corynebacterium RepID=C2BM70_9CORY Length = 993 Score = 355 bits (911), Expect = 4e-96, Method: Composition-based stats. Identities = 114/545 (20%), Positives = 219/545 (40%), Gaps = 33/545 (6%) Query: 6 LLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFA 65 +L L + +A L ++ + R A + + G V ++ + V R Sbjct: 1 MLVLLGALIAASVVAPLLIMRMGRPAFGILALVPSAGFVWTLVHFLRGTFTDSGAVERTV 60 Query: 66 PPFEFAD--LTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIA 123 A+ +LR+D L A L+I + + +Y Y + A M F Sbjct: 61 EWMPSANLSFSLRLDGLGALFSLIILGMGALVLVYCWGYFDGT-RRRLAMFAAQMVGFAT 119 Query: 124 SMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKT-SINAGMLYFFIAHAGSVLIMIAF 182 +M L+ DN V +E+ S+ S+ LV ++ S A + G + +++ Sbjct: 120 AMFGLVAADNFLLMYVFWEITSILSYLLVSYYAERASSRRAAQQALMVTALGGLSMLMGI 179 Query: 183 LLMGRESGSLDFASFRTLS--LSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPS 240 +L+GR++G+ F+ + +L G K+ + P H WLP A AAP+ Sbjct: 180 ILLGRQTGAWTFSDIAAYQHFAQTPFVTVAIVLILAGALTKSAIAPAHFWLPGAM-AAPT 238 Query: 241 HASA-LMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQD 299 SA L S MVK GI+ + ++A + W ++V+++G + LLG AL ++D Sbjct: 239 PVSAYLHSAAMVKAGIYLVARLAPSMYEVA----TWHVVVISLGVFTMLLGGWMALKQRD 294 Query: 300 IKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGA 359 +K +LA+ TV +G I V + + AL H+LFK LF+ Sbjct: 295 LKLVLAYGTVSQLGFITSIAAVG-----------SREAMQAALALTFAHSLFKAALFMVV 343 Query: 360 GAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSR 419 GAI T D+ K+ L ++ P+ +I L+++ +PPL GF+++ ++ Sbjct: 344 GAIDHCSGTRDITKLSGLGRKEPFLFGIAIISGLSMAGVPPLFGFVAKEAVLEATMHEEL 403 Query: 420 VEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFC------GAPRSTHAEEAQEVPNT 473 + + + +V + L + ++ F G + + V Sbjct: 404 LAGMPRNMM----LVAYVLGSILTMAYTLRFLWGAFATKQEVNGTEPAEAVAKMHPVTMG 459 Query: 474 MIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSL 533 + ++ LL AL V++ + L+ ++ + + + + Sbjct: 460 LWLSPALLTALTVVLGVFPKPLSAAFDQHLNSTFGPKEHSELALWHGFSVALGLSMLIIV 519 Query: 534 LLLLL 538 +++ Sbjct: 520 GGIVM 524 >UniRef50_C1A8Y3 NADH-quinone oxidoreductase chain L n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A8Y3_GEMAT Length = 674 Score = 354 bits (908), Expect = 7e-96, Method: Composition-based stats. Identities = 148/648 (22%), Positives = 253/648 (39%), Gaps = 68/648 (10%) Query: 34 LSGITSLVGGVIGIISGITQLHAGVTLVARFAPPFEFADLTLRMDSLSAFMVLVISLLVV 93 + ++ + + A V+L D ++D LS MVLVI+ + Sbjct: 51 IIAAFAVAMALFMRMRVGMAGPAIVSLGQWMPVGNLVIDWNFQLDQLSMLMVLVITGVGS 110 Query: 94 VCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVI 153 + L+S+ YM++ G A ++N+F+A M+ L++ + V +E + L+S+ L+ Sbjct: 111 LIHLFSIGYMQDDPG--YARYFAYLNLFVAFMLVLVLGGSYPVMFVGWEGVGLASYLLIG 168 Query: 154 ARQ-DKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDF---ASFRTLSLSPGLASA 209 DK + +AG F + G ++A L+ + LDF S + A Sbjct: 169 FWFSDKANADAGKKAFVVNRVGDFGFLVAMFLIWVTTQHLDFVGAHSVLGGMGGTPVVLA 228 Query: 210 VFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQ 268 + L F G K+ +PL+ WLP A A P+ SAL + MV G++ + + A Sbjct: 229 IALFLFVGCAGKSAQLPLYIWLPDAM-AGPTPVSALIHAATMVTAGVYLVARAAPIFAGA 287 Query: 269 TGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSL 328 +++ AIGA++AL AL + DIK++LA+STV +G + +AVG Sbjct: 288 PEAS----LVITAIGALTALFAATIALRQWDIKKVLAYSTVSQLGYMFVAVGSG------ 337 Query: 329 HDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHT-----------HDMEKMGAL 377 +FHL+ HA FK LLFLGAG++I +H D+ MG L Sbjct: 338 --------AYTAGVFHLVTHAFFKALLFLGAGSVIHAMHHAYHHTHRHDDPQDLRNMGGL 389 Query: 378 AKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSR--------VEAVALQLAG 429 A+ MP TA A + LAI+ +PPL GF S+ +F+ + + + Sbjct: 390 ARFMPATAGAMTLATLAIAGVPPLAGFFSKDEILAGVFARAHDSPLANASLLGIPGSTVL 449 Query: 430 PIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEE--AQEVPNTMIVAMLLLAALCVL 487 A + +T L + +M + F G R+ AE E P M +L+L L + Sbjct: 450 YAAYGIGILTALLTAIYMTRMLLLAFYGENRTGEAERSALHEAPLIMTAPVLILGVLTLA 509 Query: 488 IALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGL 547 I + A+ + G H ++L+ + L G+ Sbjct: 510 GGWLNLPALIPIG-PVGVLEHWLSPVTAASATRLAGAGHLSHDIEIVLVGIATGVALLGI 568 Query: 548 YWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRL 607 R+ + + + + + +D + Sbjct: 569 VIAVVLYRKPMADKAHAPVD--------------------NSLLARAYGVDDIVDTVIVK 608 Query: 608 NKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLY 655 T A+ + D+ ++ + LQ GD Y Sbjct: 609 PVSAVADTVLARGVDRGIDQGFSLGGSLLSRTASLMGSKLQDGDVGKY 656 >UniRef50_C7M2U8 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M2U8_ACIFD Length = 625 Score = 353 bits (905), Expect = 2e-95, Method: Composition-based stats. Identities = 147/684 (21%), Positives = 265/684 (38%), Gaps = 82/684 (11%) Query: 4 LQLLTWSLILYLFASLASLFLLGL--DRLAIKLSGITSLVGGVIGIISGITQLH------ 55 + L+T + L L L + A + I + + V + L Sbjct: 1 MDLITAVIGFPLLGFLVLLAFGKRIGEPRAGWVGTIATTLSFVAALALWGVVLARPADER 60 Query: 56 -AGVTLVARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAM 114 A V L F A ++ R+D L+ FMVL ++ + + LYS+ YM Sbjct: 61 VAVVRLFTWFRAGPLVAHISFRVDELTVFMVLFVTGVSSLIHLYSIGYMHRDP--RFHQF 118 Query: 115 GFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKT-SINAGMLYFFIAHA 173 ++N+F+ SM L+ +N + +E + S++L+ ++ + +AG F + Sbjct: 119 FVYLNLFVFSMTVLVSSNNLPLTFLGWEGVGACSYWLISFWFERPSAASAGKKAFIVNRI 178 Query: 174 GSVLIMIAFLLMGRESGSLDFASFR--TLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWL 231 G ++ L+ S+ ++ LS G AV LL F K+ +PL WL Sbjct: 179 GDAGFILGTALIVDHLHSVSYSVILPEAHRLSSGTLEAVALLFFLAAVGKSAQLPLFVWL 238 Query: 232 PRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLG 290 A P+ SAL + MV G+F + +++ + ++ IGAI+A + Sbjct: 239 LDAM-EGPTPVSALIHAATMVTAGVFLMARLSAFVTPAHDA----ATVIAWIGAITAFVA 293 Query: 291 VLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHAL 350 + A ++ DIK+++A+STV +G ++L +G + ALF ++ HA Sbjct: 294 AMAATSQHDIKKIVAYSTVSQLGYMMLGIGTG--------------AYVAALFLMVTHAF 339 Query: 351 FKGLLFLGAGAIISRL-HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWY 409 +K L+FL +G++I L D+ +MGAL + MP TA ++ L+I+ +PP +GF S+ Sbjct: 340 YKALIFLASGSVIHSLDGEQDVRRMGALRRFMPITAVTMILAWLSIAGVPPFSGFFSKGS 399 Query: 410 TWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTH---AEE 466 ++ F+ P+ + VT L ++ + F PR Sbjct: 400 VLEAAFAH-----------QPVLWAIGVVTAVLTAYYMGRLVYVVFYNEPRYQEVLGERS 448 Query: 467 AQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFH 526 E P M V +++LA VL L + +A H Sbjct: 449 PHESPRVMTVPLVVLAVAAVLGGLINLPFGS---------LDFLDRFLAPVFGPSLVAVH 499 Query: 527 TQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQP 586 LL A+ L G+ W R + Sbjct: 500 LSGVARAALLATDAVAGLLGVGLAWQLWGHRWRRPELEP--------------------- 538 Query: 587 LRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQH 646 +V + + D + + +P + + + A +R+ + Sbjct: 539 --MVLQRGWYVDATYDRVIAR-PMTELALEADEVVDPKVIDGAVMSVAWAARRIGGLGRR 595 Query: 647 LQSGDFRLYCLYVVAALVVLLIAI 670 +Q+G R Y L +VA +VV++ + Sbjct: 596 VQTGLVRSYLLLMVAGIVVVMGYV 619 >UniRef50_C2KMP0 NADH dehydrogenase (Quinone) n=2 Tax=Mobiluncus mulieris RepID=C2KMP0_9ACTO Length = 710 Score = 353 bits (905), Expect = 2e-95, Method: Composition-based stats. Identities = 131/690 (18%), Positives = 256/690 (37%), Gaps = 65/690 (9%) Query: 3 ALQLLTWSLILYLFASLASLFLLG----LDRLAIKLSGITSLVGGVIGIISGITQLHAGV 58 + + L ++L L L+ + G ++ + + Sbjct: 63 ITNYAGLMIAIPLVSALFLLVAGRRVDAWGHWLSVLASWVAFGIGGGVLVEMLGRAPEAR 122 Query: 59 TLVARFAPPFEF----ADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAM 114 + L +D LS V++++ + + +YS+ YM + Sbjct: 123 AQAVTLWQWLPGTELQVNFGLLLDPLSISFVMLVTFVGSLIHVYSVGYMEHDPDRR--RF 180 Query: 115 GFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQD-KTSINAGMLYFFIAHA 173 ++N+F+A+M+ L++ ++ + +E + L+S+ L+ + A F + Sbjct: 181 FAYLNLFVAAMLTLVLGNSYLVLFMGWEGVGLASYLLIGFWNQVHNNALAAKKAFVMNRV 240 Query: 174 GSVLIMIAFLLMGRESGSLDFASFRTLSLSP----GLASAVFLLAFFGFGAKAGMMPLHS 229 G + ++IA + M G++DFA+ A+ + + K+ PL + Sbjct: 241 GDLGLLIAMMAMFARFGAVDFATVLGEPAGNSGGIPWATFIGMFLLLAACGKSAQFPLQA 300 Query: 230 WLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISAL 288 WL A A P+ SAL + MV G++ +++ + + V IGAI+ + Sbjct: 301 WLGDAM-AGPTPVSALIHAATMVTAGVYLMVRSGAIYV----QTPVAALAVAIIGAITLV 355 Query: 289 LGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNH 348 G + A+ D+K++LA ST+ +G ++L G+ VG A+FHL+ H Sbjct: 356 FGAVVGCAKDDMKKVLAASTMSQIGYMMLGAGLG------------PVGWAFAIFHLVMH 403 Query: 349 ALFKGLLFLGAGAIISRLHTH-DMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISE 407 FK LFL AG ++ + +M + G L + M T A L+G LAI IPP +GF S+ Sbjct: 404 GFFKAQLFLAAGCVMHAMSDQVNMRRFGGLRRVMKITWFAFLVGWLAILGIPPFSGFFSK 463 Query: 408 WYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPR-----ST 462 ++ F + + + V G+ +++ + F G+PR Sbjct: 464 DKIIEAAFLPNPHYGEWYP---WVFGLTALVGAGITAFYMSRLFFLIFHGSPRWTTELEG 520 Query: 463 HAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVP 522 E M V +L+L+ + S + + + A++ G + Sbjct: 521 APVHPHEANAWMTVPLLVLSVFSIAAGGVLS-VGNVFVQWLDPVLSVSAASL--GASGEH 577 Query: 523 GTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNG 582 V P ++LL+L ++ G + R R A Sbjct: 578 AAHPEPVLPEMVLLVLTLTVVVIGALLAYVLFLRREVSRAIPAAGAIVSAARNDLY---- 633 Query: 583 VMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAK 642 Q + + + + + T+ + ++ TQ L + Sbjct: 634 ----------------QDVVNEKVVIVPVMTLARGVEVTDSRVVDGLVEATGWLTQWLGR 677 Query: 643 EIQHLQSGDFRLYCLYVVAALVVLLIAIAV 672 + +G R Y + +A V L + V Sbjct: 678 IGSAVHTGAPRRYAAWTLAGTVAALCLVLV 707 >UniRef50_Q2C5U2 NADH-plastoquinone oxidoreductase, chain 5 n=2 Tax=Photobacterium RepID=Q2C5U2_9GAMM Length = 626 Score = 353 bits (905), Expect = 2e-95, Method: Composition-based stats. Identities = 136/681 (19%), Positives = 247/681 (36%), Gaps = 74/681 (10%) Query: 6 LLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFA 65 L A+L LF A + S++ + + Sbjct: 5 LWLIPAAPLFSAALIVLFGKHFPTRASGILASLSVLVSAVLTGMLWLSSDFNPAFHQQLW 64 Query: 66 PPFEF----ADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIF 121 ++ L +D LS M+ V S + + L+S+ +MR G+ ++N+F Sbjct: 65 TWMAVGDWNVNIGLSVDRLSLVMITVTSWVGFLIHLFSVPFMRRDFGER--RYFCYLNLF 122 Query: 122 IASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKT-SINAGMLYFFIAHAGSVLIMI 180 +A M+ ++ DN +E+M L S+ L+ +K ++ +G F + G L+ I Sbjct: 123 VAGMLFFVMADNLILLYTGWEIMGLCSYGLISHYYNKEKNVYSGRKAFVVTRIGDTLLAI 182 Query: 181 AFLLMGRESGSLDFASF----RTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHP 236 LL +++ S++ L A+ LL FG AK+ P H WLP + Sbjct: 183 GILLAFTVFKTVNLNEIYTIASQQSMNLWLIGAICLLFLFGGMAKSAQFPFHVWLPESMA 242 Query: 237 AAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALA 296 + ++ + + MV G++ I + + L V +GA +A ALA Sbjct: 243 GPSTVSALIHAATMVTAGVYLIARNHVLF----NLVPDVTWWVSLVGAFTAFYAATCALA 298 Query: 297 EQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLF 356 + DIKR+LA+ST+ +G + A+GV L A+FH++ HA FK LLF Sbjct: 299 QNDIKRILAYSTISQIGYMFAALGVGAYDL--------------AIFHVIVHACFKALLF 344 Query: 357 LGAGAIISRL-HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPP-LNGFISEWYTWQSL 414 + +G II H HD+ KMG L KR+PW L G +++A+P F S+ + Sbjct: 345 ISSGVIIDMFNHDHDIRKMGGLGKRLPWLKWTYLAGSASLAALPVITASFFSKDAIIAAT 404 Query: 415 FSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPR----STHAEEAQEV 470 G + + + +MY + F G R + + Sbjct: 405 ---------ETGHLGWLLGALGLAGALFTSIYSFRMYFMVFNGENRTAFSEPRYLKNNGL 455 Query: 471 PNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVT 530 P M V+ +LA + I + P I GT T Sbjct: 456 PWQMKVSTGILAVGSIAIGWMQFP----------NEWSFGPHLFLPWIDSQLGTAPEIAT 505 Query: 531 PSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVV 590 + L+L ++ + W+ + ++ C Sbjct: 506 SAGLMLQVVGSLVAIAGVWIAYILVKQELKQGHGIANC--------------------QF 545 Query: 591 FSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSG 650 ++ + + T+ ++ +++ I + + + +Q Sbjct: 546 LNSAWYIDDLSKLTIIRGFKGLSALLETVIERWVLNQAIVKGIAAMLSHSGEAVSDVQGS 605 Query: 651 DFRLYCLYVVAALVVLLIAIA 671 Y + ++A V+LL + Sbjct: 606 QLSRYVIMMIAGSVLLLFYLV 626 >UniRef50_B2A3T0 NADH dehydrogenase (Quinone) n=2 Tax=Clostridia RepID=B2A3T0_NATTJ Length = 500 Score = 352 bits (904), Expect = 3e-95, Method: Composition-based stats. Identities = 124/515 (24%), Positives = 235/515 (45%), Gaps = 29/515 (5%) Query: 5 QLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARF 64 L ++ L + + L + + + + + + G + + Sbjct: 9 SLPMLIVLFPLIMTGVIFLVEQKSIFGRNLLSVVTSAITFLMVAAMYPVVIKGEVIYYQL 68 Query: 65 APPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIAS 124 A ++ +D+L + L+ S + ++ ++YSL YM++ +++ ++ Sbjct: 69 ANLIPPFGISFMVDTLGFGLSLLASFIWMLVTIYSLEYMKKEN--YTGRYYPALSLTLSG 126 Query: 125 MVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLL 184 + L + + F + FE+MSL S+ L+I + K ++ AG Y + G + + ++ Sbjct: 127 SMGLFLAGDLFTMFIFFEIMSLVSYLLIIHNETKEALRAGYKYLIVTIIGGLFLFFGIII 186 Query: 185 MGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASA 244 S ++ + +S LA A FL GFG KAGM+PLH WLP AHP APS ASA Sbjct: 187 TFELSQTITLSEMGIISTPTSLAFAGFLSFVIGFGMKAGMVPLHIWLPEAHPVAPSPASA 246 Query: 245 LMSGVMVKIGIFGILKVAMDLL-AQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRL 303 L+SG+M+K G +G++++ + Q L W +++ + I+ LG A+ ++D+KR Sbjct: 247 LLSGIMIKTGAYGLIRIMFHVFDYQMILEANWHLILAVVAVITIFLGSAVAITQEDLKRR 306 Query: 304 LAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAII 363 LA+S++ +G ILL + + LT + G +FH+ +HA K LFL AGA+I Sbjct: 307 LAYSSIGQMGYILLGLAI-----------LTETAMTGDIFHIFSHAFMKSTLFLAAGAMI 355 Query: 364 SRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAV 423 + + + + + MP T + I LA+ IPPLNGFIS+W + Sbjct: 356 MKTGKKKIADLKGVGRAMPLTMLSFTIAALAMIGIPPLNGFISKWSLSLGALEAGQ---- 411 Query: 424 ALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRS-----THAEEAQEVPNTMIVAM 478 P +V+L ++ + + ++ + + G E P M++ + Sbjct: 412 ------PYYVVILLISSLMNSVYYLPIINTAYFGKSEETDDDVESKGVISEAPMKMVMPV 465 Query: 479 LLLAALCVLIALSASWLAPKIMHIAHAFTNTPPAT 513 +L C++++L + + ++ +A Sbjct: 466 AILGFSCLILSLFPTNIPYELAQLAAKALINGNPF 500 >UniRef50_D1Y0I6 Putative NADH dehydrogenase subunit L n=1 Tax=Prevotella bivia JCVIHMP010 RepID=D1Y0I6_9BACT Length = 686 Score = 351 bits (901), Expect = 5e-95, Method: Composition-based stats. Identities = 148/691 (21%), Positives = 252/691 (36%), Gaps = 81/691 (11%) Query: 12 ILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAPPFEFA 71 +L+ + + + +V G + G Sbjct: 41 VLFALSLYTAYHYFFYTGEYTAMGETFKVVNGRLDGGHGAYPTVTVFNFTWLKFTELLTF 100 Query: 72 DLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGK--------GAAAMGFFMNIFIA 123 ++ R+ +S M++VI+ + + +YS YM E G ++++F Sbjct: 101 NIGFRLSPISVMMLVVITTVSFMVHIYSFGYMAERGEHYEFEEYEHGFQRFYAYLSMFTC 160 Query: 124 SMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDK-TSINAGMLYFFIAHAGSVLIMIAF 182 SM+ L+V N F + +E++ + S+ L+ K T+++A F + + +I Sbjct: 161 SMLGLVVATNIFQMYLFWELVGVCSYLLIGFYYPKHTAVHASKKAFIVTRFADLFFLIGI 220 Query: 183 LLMGRESGSLDFA---------SFRTLSLSPGLASAV---FLLAFFGFGAKAGMMPLHSW 230 L G+ ++ + L+ P A A+ L F G K+ M PLH W Sbjct: 221 LFFSFYVGTFNYDLNVNPELTVTLAKLATDPTTAWAIPTALFLMFIGGAGKSAMFPLHIW 280 Query: 231 LPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALL 289 LP A P+ SAL + MV G+F + + L + I A +A Sbjct: 281 LPDAM-EGPTPVSALIHAATMVVAGVFQVASLLPIYLQFGAQEQ--LHWIAWIAAFTAFY 337 Query: 290 GVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMV------GLSLHDPLLTVVGLLGALF 343 A A++DIKR LA+ST+ + +L+A+GV S +G + A+F Sbjct: 338 AAAVACAQKDIKRGLAFSTISQIAYMLVALGVCFYDAKEGAFGSHGFLHHGGLGYMAAMF 397 Query: 344 HLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNG 403 HL HA+FK LLFL +GAII + ++ E MG L K MP T LIGCLAI+ IPP G Sbjct: 398 HLFTHAMFKALLFLCSGAIIVIIGSNFKEYMGGLHKYMPITNICFLIGCLAIAGIPPFAG 457 Query: 404 FISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCG----AP 459 F S+ + +L E AL+ ++ + G+ ++Y + F G Sbjct: 458 FFSKDEIISACNALPGAEGQALK-------WIMTLVAGMTAFYMFRLYYVIFWGQSYYEL 510 Query: 460 RSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIA 519 H QEVP M ++ LA + + L V++ Sbjct: 511 DPEHRRRPQEVPFVMWGPLVFLAIISCVAGLIP-----------------FGHFVSANGL 553 Query: 520 LVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPS 579 + + ++ ++ + L +Y + A +R Sbjct: 554 SYDIHIDWNIATTSIIAAVIGISLATYMYMGKKQPVADALQRAMPN-------------- 599 Query: 580 GNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQR 639 L F L A D + T Sbjct: 600 -------LHKAALNRFYLDNVWQFFTHKIVFRLFSMPIAWFDRRVID-GTFNFLAWGTNE 651 Query: 640 LAKEIQHLQSGDFRLYCLYVVAALVVLLIAI 670 + ++ QSGD R Y ++ + + L + + Sbjct: 652 AGESVRSWQSGDVRQYVVWFITGTIALTLVL 682 >UniRef50_B1ZRS2 Proton-translocating NADH-quinone oxidoreductase, chain L n=3 Tax=Verrucomicrobia RepID=B1ZRS2_OPITP Length = 622 Score = 351 bits (901), Expect = 6e-95, Method: Composition-based stats. Identities = 161/678 (23%), Positives = 266/678 (39%), Gaps = 68/678 (10%) Query: 1 MDALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTL 60 M QL L+L L ++ L + + + G G + H Sbjct: 1 MTPTQLALLVLLLPLASAAVIALFLRRAGEIAAVVSVLAAAGIATGALILAFGNHRFEAT 60 Query: 61 VARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNI 120 L + D L+A M+ V+ ++ ++S YMRE K A ++I Sbjct: 61 AEWLRLGDFSFPLGFKFDDLAALMLFVVGVVGFFIHVFSFGYMREDTAK--ARYFGGLSI 118 Query: 121 FIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLY-FFIAHAGSVLIM 179 F+ SM+ + V DN F V +E++ SSW L+ ++ S +A F + G + Sbjct: 119 FMFSMIGITVADNLFMMFVFWELVGFSSWLLIGHWHERPSASAAAKKAFIVNRVGDFGFL 178 Query: 180 IAFLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAP 239 + + G++ + + L LL F G K+ MPL WLP A P Sbjct: 179 LGIAMCYWVHGTVTLSELDGVQPVGALLP---LLLFCGAVGKSAQMPLQVWLPDAM-EGP 234 Query: 240 SHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQ 298 + SAL + MV GI+ + ++ + ++ + ++M +G +AL L A+ + Sbjct: 235 TPVSALIHAATMVAAGIYMLCRINVLMVPEA------LTVIMWVGTATALYAALCAIVQS 288 Query: 299 DIKRLLAWSTVENVGIILLAVGVAMVG-----LSLHDPLLTVVGLLGALFHLLNHALFKG 353 DIK++LA+ST+ +G ++ A G+ + ++ G+ A+FHL+ HA FK Sbjct: 289 DIKKVLAYSTLSQLGYMVAAFGLGSLAERHEMGGAVHEIVIAAGVGAAMFHLVTHAFFKA 348 Query: 354 LLFLGAGAIISRL-HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQ 412 LLFLG+G++I H D+ KMG L KRMP T A IG LAI +P L GF S+ Sbjct: 349 LLFLGSGSVIHGCHHEQDIFKMGGLVKRMPVTFATFTIGVLAIIGMPGLAGFFSKDAILL 408 Query: 413 SLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPN 472 + + V+LA T L V+++ ITF GAPRS HAE A E + Sbjct: 409 LAYQKNAA-----------VFVVLAFTAILTACYMVRVWKITFFGAPRSEHAEHAHESGS 457 Query: 473 TMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPS 532 + + +++LAAL +L + V +G+ + H + Sbjct: 458 VLTMPLIVLAALAILGGYIGLY-----------------PDVFTGVLDLVPEAHGSTHTT 500 Query: 533 LLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFS 592 +LL L M + G + + R + LR F Sbjct: 501 ILLTSLAVMVIGAGAGYAFYRPGAEDALAVKSP-------------GAFTSLVGLRNSFD 547 Query: 593 ALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDF 652 A + + F +IR + + + G Sbjct: 548 AAY-------DYYVAKVQQRFAMLLNFLEQIFLAGLIIRGLAGVVGLFGLGARAVHVGKL 600 Query: 653 RLYCLYVVAALVVLLIAI 670 Y + + + VL + Sbjct: 601 NAYVYWFLGGVAVLWLFA 618 >UniRef50_B0R3U9 NADH dehydrogenase-like complex subunit L n=9 Tax=Halobacteriaceae RepID=B0R3U9_HALS3 Length = 692 Score = 351 bits (900), Expect = 7e-95, Method: Composition-based stats. Identities = 142/708 (20%), Positives = 248/708 (35%), Gaps = 72/708 (10%) Query: 6 LLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFA 65 + +L A LA F L + GI + G ++ + + G + Sbjct: 11 IPLLPFASFLVALLAGYFAPKLLPKGGAIPGIVATAGSLVVSVWAFVTVSQGEYIAESIY 70 Query: 66 PPFE-----FADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNI 120 + +D L+A M++++SL+ + ++SL YM + G + + Sbjct: 71 TWVAAPNAFSLHFGVLVDPLAAMMLVIVSLVAFLVHVFSLGYMNDEGEGGLHRYYAGLGL 130 Query: 121 FIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSI-NAGMLYFFIAHAGSVLIM 179 F SM+A +V DN + FE++ L S+ L+ + +A F + G + Sbjct: 131 FTFSMLAFVVADNLLMAFMFFELVGLCSYLLIGFHFRQQGPPSAAKKAFLVTRFGDYFFL 190 Query: 180 IAFLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFG---------------------- 217 I + + G+ F + + + + L A G Sbjct: 191 IGVVAVFATFGTARFVATGEGAHAFPHMAEQALAAVGGEGTMPAHVAHFLDVVGMSAQQW 250 Query: 218 -----------FGAKAGMMPLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDL 265 K+ PLH+WLP A P+ SAL + MV G++ + + + Sbjct: 251 FSVVGLLVLGGVIGKSAQFPLHTWLPDAM-EGPTPVSALIHAATMVAAGVYLVAR----M 305 Query: 266 LAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVG 325 L ++ +G +AL + + ++K++LA+ST+ G ++L +G Sbjct: 306 YGFYALLPTVLAIIALVGGFTALFAATMGVVKDELKQVLAYSTISQYGYMMLGLGTG--- 362 Query: 326 LSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHT-HDMEKMGALAKRMPWT 384 G + A FHLL HA FK LLFLGAG++I +H +M MG L K+MP T Sbjct: 363 -----------GYIAASFHLLTHAFFKALLFLGAGSVIIAMHHNENMWDMGGLRKKMPVT 411 Query: 385 AAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAV 444 L G LA++ I P GF S+ ++ L A M + Sbjct: 412 YYTFLSGSLALAGIVPFAGFWSKDEILYEALIYGAGDSPILLA----AYAMGLLAVFFTG 467 Query: 445 MCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAH 504 +M +TF G PRS AE+ V + +++L L + L + + Sbjct: 468 FYTFRMVVLTFHGEPRSDTAEDPHGVRWNVKFPLVVLGVLAATVGLVNMTPVAEATGLHI 527 Query: 505 AFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGD 564 F +T A G H A + P + + Sbjct: 528 EFLHTWLAGPEGTAFSALGYEHYHHLLESFAGYH-AADIAPFVPAAVSLALALGGAGLAW 586 Query: 565 AWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPF 624 G G R + + + + A + + Sbjct: 587 LLYSGPAPTKHTEKLGAA-----RTLLYNNYYQDEY--QVWLAKGVTLPLARGADTFDQG 639 Query: 625 WDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLIAIAV 672 + ++ + S + I+ +Q G Y + LV LL+ V Sbjct: 640 VIDGIVNAVSSISLFSGGRIRRIQDGIVSHYATMLTLGLVALLVVFGV 687 >UniRef50_Q10880 Uncharacterized protein Rv0083/MT0090 n=15 Tax=Mycobacterium RepID=Y051_MYCTU Length = 640 Score = 351 bits (900), Expect = 7e-95, Method: Composition-based stats. Identities = 175/618 (28%), Positives = 297/618 (48%), Gaps = 9/618 (1%) Query: 57 GVTLVARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGF 116 G V + + + +D L F + + + Y + Y+R Sbjct: 29 GPVRVVHVGWLLPLSGVHIELDRLGGFFMALTGAVAAPVGCYLIGYVRREHLGRVP--MA 86 Query: 117 FMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSIN-AGMLYFFIAHAGS 175 + +F+A+M+ + + F++ +E+M+++S LV++ + + AG+ Y + G Sbjct: 87 VVPLFVAAMLLVPAAGSVTTFLLAWELMAIASLILVLSEHARPQVRSAGLWYAVMTQLGF 146 Query: 176 VLIMIAFLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAH 235 + I++ +++ GS FA + G+ +AVF+L GFG+KAG++PLH+WLPRAH Sbjct: 147 IAILVGLVVLAAAGGSDRFAGLGAVC--DGVRAAVFMLTLVGFGSKAGLVPLHAWLPRAH 204 Query: 236 PAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYAL 295 P APS SALMS MV +GI+GI++ + LL P WWG+ ++A+G SAL GVL A Sbjct: 205 PEAPSPVSALMSAAMVNLGIYGIVRFDLQLLGPG--PRWWGLALLAVGGTSALYGVLQAS 262 Query: 296 AEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLL 355 D+KRLLA+ST EN+G+I LA+G A + + A+ H++ HA FK L Sbjct: 263 VAADLKRLLAYSTTENMGLITLALGAATLFADTGAYGPASIAAAAAMLHMIAHAAFKSLA 322 Query: 356 FLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLF 415 F+ AG++++ D++ +G LA+RMP T + L +P GF+SEW QSL Sbjct: 323 FMAAGSVLAATGLRDLDLLGGLARRMPATTVFFGVAALGACGLPLGAGFVSEWLLVQSLI 382 Query: 416 SLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMI 475 + + L P+A+ ++A+ GL+V K +GI F PRST AE A+E P +M Sbjct: 383 HAAPGHDPIVALTTPLAVGVVALATGLSVAAMTKAFGIGFLARPRSTQAEAAREAPASMR 442 Query: 476 VAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLL 535 M + A C+++A++ +AP + A A+V + ++ Sbjct: 443 AGMAIAAGACLVLAVAPLLVAPMVRRAAATLPAAQAVKFTGLGAVVRLPAMSGSIAPGVI 502 Query: 536 LLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACG-YGWENAMAPSGNGVMQPLRVVFSAL 594 + L R RR WACG M + +PL+ VF + Sbjct: 503 AAAVLAAALAVAVLARWRFRRRPAPARLPLWACGAADLTVRMQYTATSFAEPLQRVFGDV 562 Query: 595 FRLRQQLDPT-LRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFR 653 R ++ T ++ +A + ++R+ P+V A +A+ ++ +G Sbjct: 563 LRPDTDIEVTHTAESRYMAERITYRTAVADAIEQRLYTPVVGAVAAMAELLRRAHTGSVH 622 Query: 654 LYCLYVVAALVVLLIAIA 671 Y Y ++++L+ Sbjct: 623 RYLAYGALGVLIVLVVAR 640 >UniRef50_A5CFN9 NADH dehydrogenase I chain L n=2 Tax=Orientia tsutsugamushi RepID=A5CFN9_ORITB Length = 635 Score = 350 bits (898), Expect = 1e-94, Method: Composition-based stats. Identities = 125/690 (18%), Positives = 247/690 (35%), Gaps = 82/690 (11%) Query: 3 ALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVA 62 L+T L L + + S I + + I + ++ Sbjct: 1 MSFLITLLPCLPLISGVISRLNNSFATKIISYITVMLIASTSFAAILVFWNISKHNSVEH 60 Query: 63 RFAPPFEFA-----DLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFF 117 + + +D L+A M++++SL+ + +YS+ Y+ ++ K + Sbjct: 61 IILFEWLELLNFKSHWAIYIDKLTALMLVIVSLISTIVHIYSIGYL--HDDKELPKFMSY 118 Query: 118 MNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLY-FFIAHAGSV 176 ++ F M+ L+ DN +E + +SS+ L+ K + F + Sbjct: 119 LSFFTFFMLMLVSSDNFLQLFFGWEGVGVSSYLLIGFWHKKYAAIIAAYKAFIVNRFADC 178 Query: 177 LIMIAFLLMGRESGSLDFASFRTLS------------LSPGLASAVFLLAFFGFGAKAGM 224 ++A + + S++F + + + + + + L F G K+ Sbjct: 179 AFLLAIIAIIYNCNSVEFKTVFSHAEQLSKTIVSIVDIKISVLDLICCLLFIGCMGKSAQ 238 Query: 225 MPLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIG 283 + LH WLP A P+ ASAL + MV GIF + + + L+ G Sbjct: 239 IGLHIWLPDAM-EGPTPASALIHAATMVTAGIFLLARCSFMF----EYSTAILNLIAITG 293 Query: 284 AISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALF 343 + +L + A+ + DIK+++A+ST +G +++A G GA+F Sbjct: 294 GFTCILTSIIAVCQNDIKKIIAYSTCSQLGYMVMACG--------------SSSYNGAMF 339 Query: 344 HLLNHALFKGLLFLGAGAIISRLHTHDMEKM-GALAKRMPWTAAACLIGCLAISAIPPLN 402 HLL HA FK +LFL AG +I H D+ KM L + MP+T +G LAI I P + Sbjct: 340 HLLTHAFFKAMLFLAAGNVIHMTHQQDLNKMPQQLWRVMPYTYGLFWLGTLAIVGIFPFS 399 Query: 403 GFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRST 462 GF S+ +S++ + + M +K+ F S+ Sbjct: 400 GFYSKDMILESVYLTDNK----------FVYYLGIIAVFFTAMYSIKLIIGIFHQPSFSS 449 Query: 463 HAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVP 522 +EV M + +L+LA + + ++ + L Sbjct: 450 TKHSIKEVSIIMNLPLLILAIGSAISGWYCYNILTI------GKVEYFANSLFNNGNLEN 503 Query: 523 GTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNG 582 + + L +L+ + ++ GL + + + + R+ + A Sbjct: 504 LHINCWMIKILPILVGVFGLIIGGLIYYYKSNVNISIIRSISSPA--------------- 548 Query: 583 VMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAK 642 F + + L + + ++ + ++ Q Sbjct: 549 ---------RNKFYFDEIYNTLLVKTFNIVSY-YLSIFDIKCINKFLDDSLIFLVQSGFS 598 Query: 643 EIQHLQSGDFRLYCLYVVAALVVLLIAIAV 672 I+ +QSG Y L + ++ I + Sbjct: 599 GIKKMQSGYVSCYILTALVSMTAFFTLIVI 628 >UniRef50_Q8HHD2 NADH-ubiquinone oxidoreductase chain 5 n=1 Tax=Cryphonectria parasitica RepID=NU5M_CRYPA Length = 656 Score = 350 bits (898), Expect = 1e-94, Method: Composition-based stats. Identities = 124/676 (18%), Positives = 261/676 (38%), Gaps = 57/676 (8%) Query: 4 LQLLTWSLILYLFASLAS--LFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLV 61 L ++ ++ + A L + G + +T+++ + + G + + L Sbjct: 3 LSIIILPVLGSIVAGFFGRKLGVRGAQIITCSCVIVTTILALLAWVEVGFNNIPVTINLF 62 Query: 62 ARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIF 121 + + DSL+ M+L + ++ + +YS++YM ++++F Sbjct: 63 RWIDSEWFNIIWGFQFDSLTVSMLLPVLIISSLVHIYSISYMSGDPHNQ--RFFSYLSLF 120 Query: 122 IASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDK-TSINAGMLYFFIAHAGSVLIMI 180 M+ L+ +N V +E + + S+ LV + + + + F G + I Sbjct: 121 TFMMIILVTGNNYLLMFVGWEGVGVCSYLLVSFWFTRIAANQSSISAFLTNRVGDCFLTI 180 Query: 181 AFLLMGRESGSLDFASFRTLS--LSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAA 238 + G+LD+A+ +L+ ++ + + + + G AK+ + LH WLP A Sbjct: 181 GMFAILWSLGNLDYATVFSLAPYINENIITIIGICLVIGAMAKSSQVGLHVWLPMAM-EG 239 Query: 239 PSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAE 297 P+ SAL + MV G++ +++ + + ++ + +GAI+ + L L + Sbjct: 240 PTPVSALIHAATMVTAGVYLLMRSSPLI----EYSSTVLLICLWLGAITTVFSSLVGLFQ 295 Query: 298 QDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFL 357 QDIK+++A+ST+ +G++++A+G++ + ALFHL+NHA +K LFL Sbjct: 296 QDIKKVIAYSTMSQLGLMVVAIGLSSYNI--------------ALFHLVNHAFYKAALFL 341 Query: 358 GAGAIISR-LHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFS 416 GAG+II D K G L + +P T + LI L+++A P L GF S+ +S F Sbjct: 342 GAGSIIHAVADNQDFRKYGGLREFLPLTYSIILIASLSLAAFPFLTGFYSKDLILESAFG 401 Query: 417 LSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRST--HAEEAQEVPNTM 474 V+ + + + VK+ +TF P + A E + Sbjct: 402 QFTFSGVS-------VYAISTIGAIFTTLYSVKVIYLTFLANPNGSLMTVRHAHEGDIFL 454 Query: 475 IVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLL 534 + +++LA + + I + F + L+ F +L Sbjct: 455 TLPLVILAIFSIFFGYLTKDI--FIGLGSSFFVDNSLYVHPVHEILIDTEFGVPTVFKIL 512 Query: 535 LLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSAL 594 + + + + + + + L F+ Sbjct: 513 PFIFTVLFSILAILL------------------SEFIPGSVFNFKLSRFGYNLFGFFNQR 554 Query: 595 FRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRL 654 F + + + + + + +K + L +G Sbjct: 555 FLIEMFYNNYITNLVLTLGSQTTKVLDKGSVELIGPFGLEKGLMNFSKSLTKLSTGVVTS 614 Query: 655 YCLYVVAALVVLLIAI 670 Y LY++ L+ +I + Sbjct: 615 YALYILLGLISFIIIL 630 >UniRef50_UPI0001C3127D proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3127D Length = 671 Score = 349 bits (896), Expect = 2e-94, Method: Composition-based stats. Identities = 142/695 (20%), Positives = 260/695 (37%), Gaps = 105/695 (15%) Query: 7 LTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHA---------- 56 W ++ + A + L G RLA +G + ++ +S + L + Sbjct: 6 WGWLVLAFPLAGTIIIGL-GHKRLARGPAGAIGTLAILLAFVSAVGALLSLQDRDEHHRQ 64 Query: 57 -GVTLVARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMG 115 +L A L++ +D LS FM+LVI+ + + LYS++YM+ +G A Sbjct: 65 LVSSLWDYAVTGSIDARLSILVDPLSVFMMLVITGVSTLIHLYSVSYMK--SDRGNARYF 122 Query: 116 FFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKT-SINAGMLYFFIAHAG 174 ++N F+ SM+ L++ N IV + + +S+ L+ + + AG+ F I G Sbjct: 123 AYLNFFVFSMLVLVLAANFLLLIVGWAFVGAASYLLISFWYRRETATKAGIKAFVINVVG 182 Query: 175 SVLIMIAFLLMGRESGSLDFASFRTLSLSP------GLASAVFLLAFFGFGAKAGMMPLH 228 V +++ + R +G+LDF + G A LL G AK+ +P H Sbjct: 183 DVGLVLGTFFILRHTGTLDFLGTFEAVENGAFDSHNGALVAGCLLLLVGAFAKSAQVPFH 242 Query: 229 SWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISAL 288 +WLP A +S + + MV G++ I ++ A ++ + L Sbjct: 243 TWLPDAMEGPTPVSSLIHAATMVTAGVYLISRMFPLFEAAPAAADVGAVVG----CATLL 298 Query: 289 LGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNH 348 + AL + DIKR++A+ST+ +G +++ V LFHLL H Sbjct: 299 IAGTIALTQTDIKRVIAYSTMSQIGYMIMGVSAG--------------AYAAGLFHLLTH 344 Query: 349 ALFKGLLFLGAGAIISRL-HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISE 407 A FK LLF+ AG+II + ++KM + MP+T ++G LA+S +PP +GF S+ Sbjct: 345 AFFKALLFMAAGSIIGAMAGAQSLDKMSGFKRSMPFTFGCFVVGGLALSGVPPFSGFFSK 404 Query: 408 WYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEA 467 + + V+ + L + +M F G P AE Sbjct: 405 DEILAFVGHRGGW--------FSVMYVVGYIGAFLTGIYTWRMIFRAFLGRPSPEAAELE 456 Query: 468 Q--------------------------------EVPNTMIVAMLLLAALCVLIALSASWL 495 E M VAM LLA ++ + Sbjct: 457 HGHIAHAEYPTNPANGEREDTEVGFPGPEHVIAEREIPMKVAMGLLAVGATILGVL---- 512 Query: 496 APKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSR 555 +I ++ H ++ T S + + + L ++A+ + ++++ R Sbjct: 513 --QIPNVTHVISSFLEPTFESSKYFHEHPSNGFIYFGMALGTVVALLGIAVAHYIYVRK- 569 Query: 556 RAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVT 615 A + L + + +D + A Sbjct: 570 ------------------PGTAAALQARFPALHTFLLNKWYFDELIDFLIVRPWKAAGTF 611 Query: 616 ARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSG 650 AR D + + ++ ++ +Q+G Sbjct: 612 ARTTFERVVIDGVFVGGTTGIVKAGSQAVRAIQTG 646 >UniRef50_C0WGQ4 CPA3 family monovalent cation:proton (H+) antiporter-3 subunit A n=2 Tax=Corynebacterium RepID=C0WGQ4_9CORY Length = 1002 Score = 349 bits (895), Expect = 2e-94, Method: Composition-based stats. Identities = 124/536 (23%), Positives = 213/536 (39%), Gaps = 34/536 (6%) Query: 6 LLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFA 65 +L L + +A L ++ + R A L I VG V + + Sbjct: 1 MLILLGALIVATVVAPLLIMNVGRPAFGLLAIVPGVGFVWTLAHFARGTFRDGGTLNYTI 60 Query: 66 PPFEFADLT--LRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIA 123 A L LRMD+L L+I + + LY Y + + A M F Sbjct: 61 EWMPAAHLAVDLRMDALGGLFSLIILGMGALVLLYCWGYF-DSTRRRLAMFAGQMVGFAT 119 Query: 124 SMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKT-SINAGMLYFFIAHAGSVLIMIAF 182 +M L+ D+ V +E+ SL S+ LV ++ S A + G + +++ Sbjct: 120 AMFGLVTSDSLLLMYVFWEITSLLSYLLVSYYAERASSRRAAQQALMVTVLGGLSMLMGI 179 Query: 183 LLMGRESGSLDFASFRTLSLSP--GLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPS 240 L+GR++G+ F+ P + +L G K+ ++P H WLP A AAP+ Sbjct: 180 CLLGRQTGAWTFSEIHAYDHFPQTPYVTVAIVLILVGALTKSAIVPAHFWLPGAM-AAPT 238 Query: 241 HASA-LMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQD 299 SA L S MVK GI+ + ++A D+ W ++V+++G + LLG AL ++D Sbjct: 239 PVSAYLHSAAMVKAGIYLVARLAPDMYEVA----TWHLVVISLGVFTMLLGGWMALKQKD 294 Query: 300 IKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGA 359 +K +LA+ TV +G I V V + + L H+LFK LF+ Sbjct: 295 LKLILAYGTVSQLGFITSIVAVG-----------SREAMQAGLALTFAHSLFKAALFMVV 343 Query: 360 GAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSR 419 GAI T D+ K+ L +R P+ + LI L+++ +PPL GF+S+ +S Sbjct: 344 GAIDHCSGTRDITKLSGLGRRQPFLYSLALISALSMAGVPPLFGFVSKEAVLESTMHEGL 403 Query: 420 VEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEA-------QEVPN 472 + + + +V L + ++ F + +V Sbjct: 404 LIGMPRNM----ILVAYVAGSILTMAYALRFLWGAFASKNLPHDKDGVSAAVATMHKVNV 459 Query: 473 TMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQ 528 + +A +L AL + + L+ L+ I + + T Sbjct: 460 GLWLAPAVLTALTIALGLAPQALSAAIDQHLDSTFGAGEHHGLALWHGWSVTLGVS 515 >UniRef50_C0GRM0 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GRM0_9DELT Length = 699 Score = 348 bits (894), Expect = 3e-94, Method: Composition-based stats. Identities = 141/711 (19%), Positives = 248/711 (34%), Gaps = 65/711 (9%) Query: 4 LQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVAR 63 +QL LI L + FL + + + + + L + L Sbjct: 3 IQLAWLCLIFPFIGVLVTPFLARISTSVMNFGAVFFSFLAAVCALMLFPLLFSAEALPLE 62 Query: 64 ----FAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMN 119 + + +D LS + V++++ +Y + YM+ G MN Sbjct: 63 SQLVWLHTPITVSFGVLVDPLSIIVANVVAVISFFIMVYCVGYMKGDPG--IMRFWMLMN 120 Query: 120 IFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSIN---------------AG 164 FI SM+ L++ +N + ++++ L S+ L+ G Sbjct: 121 AFIGSMLLLVLANNLIIIFIGWKLVGLCSYGLIGFYYRDEKKYWIGGPEPYSFDTPSACG 180 Query: 165 MLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRT--------LSLSPGLASAVFLLAFF 216 + F + G +L++ L+M +G+ + ++ +PG+ V +L Sbjct: 181 VKAFIVTSVGDMLMLGGILIMYFYAGTFNVLELYQTAPEWIPEMAATPGMIILVSILLIA 240 Query: 217 GFGAKAGMMPLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLL-----AQTG 270 G K+ PLH WLP A P SAL + MVK G+F I + A Sbjct: 241 GPVGKSAQFPLHEWLPEAMS-GPGPVSALIHAATMVKSGVFLIARFIPIFYYGYWTAGVD 299 Query: 271 LPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHD 330 +++ ++V IGAI+A L L ++K++LA+STV +G ++LA+GVA L Sbjct: 300 EAMYFFLIVAWIGAITAFLAASQGLVALELKKILAYSTVSQIGYMMLALGVAGFSQDLLV 359 Query: 331 PLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLI 390 G FHL++HA+FK LFL AG +I H+ + MGAL K +P+T + Sbjct: 360 K-----GYAAGTFHLMSHAMFKACLFLCAGTVIHAAHSIYINDMGALRKFLPYTWLFMGL 414 Query: 391 GCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKM 450 L++ +PPL GF S+ + + + +++ V+ + Sbjct: 415 ATLSLIGVPPLPGFWSKEAVLLATLESQHI----------VLFLIVLVSVIFTAFYSTRY 464 Query: 451 YGITFCGAPR-------STHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIA 503 +G+ F G E A +LAA V+ L + + + Sbjct: 465 FGMMFHGKQSRHIKQELKKPHNHVHEGYFPQTFACGVLAAGIVIFGLMGMRVEYALYGLF 524 Query: 504 HAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLW-----CRSRRAA 558 A V +L+ + + + W + R Sbjct: 525 ETQLVQDLAHSTVLSVPSFDKTLIMVLSIGSVLIGVIPAYMFYIARKWDADAVYENSRVV 584 Query: 559 FRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARA 618 W Y GVM R V + L + Sbjct: 585 QLVHAFLWNRWYINAFYNWLFVKGVMGAARAVAEKVEIAVDTAINRLTPSGVFGLSGISV 644 Query: 619 QSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLIA 669 D + + LQ+G + Y +A ++ LL+ Sbjct: 645 WFDRKGIDGFLDGMAYHVQNSAGGTLSRLQNGRIQDYLA--LAVIIALLVC 693 >UniRef50_B4SLF9 NADH dehydrogenase (Quinone) n=20 Tax=cellular organisms RepID=B4SLF9_STRM5 Length = 943 Score = 348 bits (893), Expect = 4e-94, Method: Composition-based stats. Identities = 131/552 (23%), Positives = 225/552 (40%), Gaps = 28/552 (5%) Query: 18 SLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAP-PFEFADLTLR 76 ++A R + +GG+ + + G + P D TLR Sbjct: 16 AVAVAAFPRSSRSTAAWLAALAPLGGLAILGWLTPSVLDGQVVRTMVPWLPQIGLDFTLR 75 Query: 77 MDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFW 136 +D L+ ++ + + LY+ Y+ A ++ +F+ +M+ ++V N Sbjct: 76 LDGLAWMFAGLVLGIGALVVLYARYYLS--SQDNAHRFYTYLLLFMGAMLGMVVSGNLLL 133 Query: 137 FIVLFEMMSLSSWFLVIARQDK-TSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFA 195 ++ +EM S+SS+ L+ + + + I G + ++ LL+GR GS D Sbjct: 134 LMIFWEMTSISSFLLIGFWSHRQDAREGARMALVITGGGGLALLGGVLLIGRIVGSFDLD 193 Query: 196 SFRTLS---LSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASA-LMSGVMV 251 + L L G K+ P H WLP A AAP+ SA L S MV Sbjct: 194 VVLAAGEQIRASALYPYALFLVLAGIFTKSAQFPFHFWLPHAM-AAPTPVSAYLHSATMV 252 Query: 252 KIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVEN 311 K G+F + ++ L + V IGA++ L+G A+ + D+K LLA+ST+ + Sbjct: 253 KAGVFLLARLHPALAGSD----LFFYTVSGIGALTLLIGAWNAIFQHDLKGLLAYSTISH 308 Query: 312 VGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDM 371 +G+I L G++ T + ++ +FH+LNHA FK LF+ AG I T DM Sbjct: 309 LGLITLLFGLS-----------TPMAVVAGVFHILNHATFKASLFMAAGIIDHETGTRDM 357 Query: 372 EKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPI 431 K+G L + MP+T+A +I LA++ IP LNGF+S+ + + Sbjct: 358 RKLGGLRRLMPFTSALAIIASLAMAGIPLLNGFLSKEMLFAEALTAGGGPGAMRTA---- 413 Query: 432 AMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALS 491 + + G V ++ TF G E P M V + LL +CV + ++ Sbjct: 414 VSIAALLAGVFGVAYSLRFVHDTFFGPGPHDLDRVPHEPPRWMKVPVELLVVICVAVGIA 473 Query: 492 ASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLW 551 + ++H A A S ++ ++ + L L L Sbjct: 474 PALTVAPVLHAAAASILGNAMPEYSLAVWHGFNLPLAMSAIGVVGGVALYFGLRRLINLH 533 Query: 552 CRSRRAAFRRTG 563 + + R Sbjct: 534 GVTNTSPGRNVF 545 >UniRef50_D1B457 NADH/Ubiquinone/plastoquinone (Complex I) n=2 Tax=Campylobacterales RepID=D1B457_SULD5 Length = 646 Score = 347 bits (892), Expect = 7e-94, Method: Composition-based stats. Identities = 184/623 (29%), Positives = 316/623 (50%), Gaps = 23/623 (3%) Query: 37 ITSLVGGVIGIISGITQLHAGVTLVARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCS 96 + + ++ + + I + P + R++ L F ++S++ S Sbjct: 28 VGFGLASILSLYAAIFFFSHLSDTLIWKLPGSFISAPLFRLEPLGMFFSFLVSMIAFAVS 87 Query: 97 LYSLTYMREYEGK-GAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIAR 155 L+S Y + YE K A N FI SM+ ++ DN F F++L+E+M+L S L++ Sbjct: 88 LFSFDYAKFYEKKANLAVFASLFNAFILSMLLVVASDNVFSFMLLWEVMTLLSALLILIN 147 Query: 156 QDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRTLSLSPGLASAVFLLAF 215 K S M+Y IA G+ +M+A L+M + S +F+ F +++ G + +F+L Sbjct: 148 DGKESSKNIMIYLGIAQIGAFCLMVALLIMASFADSFEFSHFNEMNIGFGASLTLFVLLL 207 Query: 216 FGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWW 275 G G+KAGM P H WLP A+ PS+ASALMSGVM+K+ +F +K ++ L + + Sbjct: 208 VGLGSKAGMFPFHVWLPVAYCECPSNASALMSGVMIKVALFAFIKFSLLL----PQWVHF 263 Query: 276 GILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTV 335 G +++ +GA+S + G++YAL D K +A+S+ ENVGII L +G A GL + P L + Sbjct: 264 GYILLFMGALSCVFGIMYALVSNDYKASIAYSSCENVGIIFLGLGGAFYGLGANSPTLAL 323 Query: 336 VGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAI 395 +G + A FH+LNH++FK LLF+ +G + + T +M+ +G L K+MP T+ + +A+ Sbjct: 324 LGFIAAFFHILNHSVFKSLLFMLSGNVYTATLTRNMDTLGGLHKKMPLTSLIFCVAVVAM 383 Query: 396 SAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITF 455 A+PPLNGF SEW ++++ +A + A++ L++TG +A+M F K+YG F Sbjct: 384 CALPPLNGFASEWVIYKTMVMGGVDAGIASRFFFATAIIALSITGAMALMAFAKVYGSIF 443 Query: 456 CGAPRSTHA-EEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATV 514 G PR EE +EV ++ + LLA+LCV + L + + + + +V Sbjct: 444 LGLPREPQKMEEIKEVSFIRLLPLGLLASLCVGLGLFMNDVIGMLSRMVFTLIPQTSQSV 503 Query: 515 ASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWEN 574 H ++ LL++++L LLP + ++ R + WACG+ + Sbjct: 504 -----------HGLISMPLLVMVMLLCALLPFFFLYLLKANHKVA-RQTEPWACGFKYNP 551 Query: 575 AMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIV 634 M N ++ S L R +++ G T + E++ P++ Sbjct: 552 TMQIGSNAFTGDIKKALSFLLRYEREIKID-----GYFSKATYTHKTHDLFWEKLYAPVI 606 Query: 635 SATQRLAKEIQHLQSGDFRLYCL 657 +A +I Q+G LY Sbjct: 607 DFIMVVADKIGVFQNGRTNLYAG 629 >UniRef50_C0GDB1 NADH dehydrogenase (Quinone) n=2 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GDB1_9FIRM Length = 782 Score = 347 bits (891), Expect = 7e-94, Method: Composition-based stats. Identities = 130/529 (24%), Positives = 235/529 (44%), Gaps = 21/529 (3%) Query: 8 TWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARF-AP 66 + SL + R + KL I +++ +I + V ++ Sbjct: 19 LLPVFAVAVPLAGSLLVFFAGRFSEKLRDICAVITALITFGIVFSMYPLVQQAVLQYEFA 78 Query: 67 PFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMV 126 F + R+D ++S + + +LYS+ YM G+ F+ + + Sbjct: 79 KFLQVSIHFRVDFFGFVFAALMSCIWFLATLYSIAYMEH--GRAKNRYYVFLLSTLGHCL 136 Query: 127 ALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMG 186 ++++ + F + FE+M+ SS+ LVI + ++ G + ++ G + +++A L+ Sbjct: 137 GVVLVGDLFSLFLFFELMTFSSYVLVIHEETPDAMAGGAVTLYLGVFGGLCLLMAIFLLY 196 Query: 187 RESGSLDFASFRTLSLSPGL-ASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASAL 245 G+++ + + V L GFG KAGM+PLH WLP+AHP AP+ ASAL Sbjct: 197 FNVGTMEIIPLYEQIAASAINPYTVVTLFLVGFGIKAGMVPLHIWLPKAHPVAPAPASAL 256 Query: 246 MSGVMVKIGIFGILKVAMDLLAQTGLPLW---------WGILVMAIGAISALLGVLYALA 296 +SG+M+K G +GI +V + + +G ++ +G I+ LG AL Sbjct: 257 LSGLMIKAGAYGIFRVVGMIFTPSEFSEVAVPSIVSVNFGYAIIWMGIITMFLGAFMALL 316 Query: 297 EQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLF 356 K++LA+S+V +G ILL VG A +G GAL+H++NHA FK LF Sbjct: 317 STGAKKILAYSSVSQMGYILLGVGTAAYLGFAG-----PMGFAGALYHIINHAFFKAGLF 371 Query: 357 LGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFS 416 + G+I H D+ ++ +AK++P+ A LIG I IP NG+ S+ ++ Sbjct: 372 MMVGSIYMITHNLDITQVRGMAKKVPFIAVTFLIGYAGIGGIPGFNGYGSKTILHHAIVD 431 Query: 417 LSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIV 476 + + +A + VT + + F K++ F G + +++ + Sbjct: 432 AANLHGSVPLH---VAEKIFVVTSAMTLCYFAKLFRGLFLGDVPEKYDKKSYNFTWPVYA 488 Query: 477 AMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTF 525 + A+ + I L +L +++ A A P VA L + Sbjct: 489 VLGTFGAIIIAIGLFPHFLLNRMVIPAMAGFTYDPYKVAYLENLSVWIW 537 >UniRef50_A4GYW4 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic n=5090 Tax=Embryophyta RepID=NU5C_POPTR Length = 760 Score = 347 bits (891), Expect = 8e-94, Method: Composition-based stats. Identities = 120/477 (25%), Positives = 204/477 (42%), Gaps = 60/477 (12%) Query: 9 WSLILYLFASLASLFLL----GLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARF 64 +L + + + L L R+ S + + V I I Q+++ + Sbjct: 14 VTLPVPMLIGMGLLLFPVSTKKLHRIWAFPSVLLLSIVMVFSIDLFIQQINSSSIYQYVW 73 Query: 65 APPF---EFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIF 121 + + +D L++ ++++I+ + ++ +YS +YM +G +M+ F Sbjct: 74 SWTINNDFSLEFGYLIDPLTSILLILITTVGILVLVYSDSYMSHDQG--YLRFFVYMSFF 131 Query: 122 IASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKT-SINAGMLYFFIAHAGSVLIMI 180 SM+ L+ N + +E++ + S+ L+ + NA F G +++ Sbjct: 132 NTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPIVSNACQKAFVTNRVGDFGLLL 191 Query: 181 AFLLMGRESGSLDFASFRTL----------SLSPGLASAVFLLAFFGFGAKAGMMPLHSW 230 L + +GS +F + + + L F G AK+ PLH W Sbjct: 192 GILGLYWITGSFEFQDLFEIFNNLIYNNDNEVHFLFVTLCAFLLFSGAIAKSAQFPLHVW 251 Query: 231 LPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALL 289 LP A P+ SAL + MV GIF + ++ + + + L+ IG I+ LL Sbjct: 252 LPDAM-EGPTPISALIHAATMVAAGIFLVARLLPLFV----VIPYIMKLIALIGIITVLL 306 Query: 290 GVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHA 349 G A A++DIKR LA+ST+ +G +LA+G+ ALFHL+ HA Sbjct: 307 GATLAFAQKDIKRGLAYSTMSQLGYTMLALGMG--------------SYRAALFHLITHA 352 Query: 350 LFKGLLFLGAGAIISRL---------HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPP 400 K LLFLG+G+II + + +M MG L K +P T A L+G L++ IPP Sbjct: 353 YSKALLFLGSGSIIHSMEVIVGYSPDKSQNMVLMGGLTKHVPITKIAFLLGTLSLCGIPP 412 Query: 401 LNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCG 457 L F S+ +S S PI ++ T GL ++Y +TF G Sbjct: 413 LACFWSKDEILNDSWSYS-----------PIFAIIAFSTAGLTAFYMFRVYLLTFEG 458 >UniRef50_B6YWP6 Hydrogenase 4, subunit 3 n=3 Tax=Thermococcus RepID=B6YWP6_THEON Length = 634 Score = 347 bits (890), Expect = 9e-94, Method: Composition-based stats. Identities = 164/613 (26%), Positives = 278/613 (45%), Gaps = 33/613 (5%) Query: 3 ALQLLTWSLILYLFASLASLFLLG--LDRLAIKLSGITSLVGGVIGIISGITQLHAGVTL 60 + + +I+ AS +F L +L LS + SL GI+ + +TL Sbjct: 1 MEVIFLFIVIILSVASFIGVFSRSAILTKLVNALSALGSLTIAYAGIVGLKESVELNITL 60 Query: 61 VARFAPPF--EFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFM 118 + + F+ LTL++D LS F ++++ +L S+Y + Y+ Y+G F Sbjct: 61 LHLKSDSIINAFSTLTLKVDPLSGFFMIILGILGFCTSVYGIAYLDMYKGDK-RLYAFNY 119 Query: 119 NIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLI 178 +F+ M +LV N WF+V +E+M+L S FLV +++ ++ A + YF + A + + Sbjct: 120 PLFLLFMFLVLVSWNLLWFVVFWELMTLFSQFLVAFERNEKTLIATLKYFCMTKAAADFM 179 Query: 179 MIAFLL-MGRESGSLDFASFRTLSLS-----PGLASAVFLLAFFGFGAKAGMMPLHSWLP 232 +IA +L + SG D+ + ++ P V G G KA ++P H WLP Sbjct: 180 LIAIVLVLITISGGGDYDILSSQLVNYFRSHPLEMYLVSAGFMIGLGVKAALVPFHVWLP 239 Query: 233 RAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVL 292 A+ APS+ S+L+SG M K+ ++ + + + L G+L+ G ++ G + Sbjct: 240 DAYVEAPSNVSSLLSGAMEKMPVYMMFRFFLSFTP---LTPNIGLLIALFGTLTLFFGTM 296 Query: 293 YALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFK 352 YAL + D KRLLA+ +V +G ++ A+G + LS + L+ +LFH LNHA FK Sbjct: 297 YALKQTDSKRLLAYHSVGQIGYVVFALGAGIYLLSKGYTTFGALALMASLFHALNHAFFK 356 Query: 353 GLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQ 412 GLLFL AG+I+ R + D++ +G LA+ MP TA A LIG L+I+ +PP NGF+S+W + Sbjct: 357 GLLFLTAGSILYRTGSRDLDHLGGLARFMPITAFAALIGSLSIAGMPPFNGFVSKWMIYV 416 Query: 413 SLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPN 472 S + + + FVK + F P +EVP Sbjct: 417 STLPTPT--------LVSLFGALALFISAVTTASFVKYFTSIFVRPPAKEIT--VKEVPV 466 Query: 473 TMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPS 532 +M + L+LA LCV+ + + I + T P+ +V + Sbjct: 467 SMWASQLILAVLCVIFGVYPALPLEAISKAVDSVGVTTPSITVFPGLIVSDGIGNIAPLA 526 Query: 533 LLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFS 592 LL+ +L ++ ++ + W G AM + F Sbjct: 527 LLVFSGALTAVLLAIF---------PYKISLPVWTTGTRRSLAMRLPASSYYASFEEEFE 577 Query: 593 ALFRLRQQLDPTL 605 ++ + T Sbjct: 578 DVYSWGEWCVCTT 590 >UniRef50_D0XMF8 NADH dehydrogenase (Quinone) n=3 Tax=Alphaproteobacteria RepID=D0XMF8_9CAUL Length = 992 Score = 347 bits (890), Expect = 1e-93, Method: Composition-based stats. Identities = 133/662 (20%), Positives = 248/662 (37%), Gaps = 39/662 (5%) Query: 16 FASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAP-PFEFADLT 74 +LA + R A L+ + ++ + S + AG + AR P +L Sbjct: 48 IGALAPALAIRRGRNASALAAGAVTLAALVILGSFAPAVLAGEVVQARIDWIPLLGLNLN 107 Query: 75 LRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNA 134 L +D+L +I + ++ +Y+ Y+ + + G ++ +F +M +++ DN Sbjct: 108 LFLDALGLMFAGMILGIGLLVIVYARFYLAKADPMG--RFFVYLLLFQGAMTGIVLSDNV 165 Query: 135 FWFIVLFEMMSLSSWFLVIARQD-KTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLD 193 ++ +E+ SLSS+ L+ + + + AG + ++ L++G +GS D Sbjct: 166 LLLLIFWELTSLSSFLLIGFWRHLPEGRQGARMALAVTGAGGLSLIGGLLILGNIAGSYD 225 Query: 194 FASF---RTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASA-LMSGV 249 R + L LL G K+ P H WLP A AAP+ SA L S Sbjct: 226 LTVILQNREAIQASPLYLPALLLILGGCFTKSAQFPFHFWLPHAM-AAPTPVSAYLHSAT 284 Query: 250 MVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTV 309 MVK GIF + ++ L W LV G ++ + + AL + D+K LLA+ST+ Sbjct: 285 MVKAGIFMLARLWPVLSGTGE----WFYLVATTGLVTMVFAAVVALFKDDLKGLLAYSTI 340 Query: 310 ENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTH 369 ++G + + G T + + +FH+LNHA FK LF+ AG + T Sbjct: 341 SHLGFLTMLFGFG-----------TPMAAVVGVFHILNHATFKAALFMNAGIVDHEAGTR 389 Query: 370 DMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAG 429 D++++G LA MP A ++ L+++ IPPLNGFIS+ + Sbjct: 390 DIKRLGGLATLMPIAATLAVVAGLSMAGIPPLNGFISKEMMLEEASHT------VWWSQP 443 Query: 430 PIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIA 489 + + + +V + + G R+ + + + + +L L V I Sbjct: 444 WLVPALATLGATFSVAYSFRYIVHVYFGTTRTDYPKTPHDPGIGLWGPPAVLVGLVVAIG 503 Query: 490 LSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYW 549 L + +A ++ S T ++ + + + + + + Sbjct: 504 LFPAVVAGPLVEAVSRAVIGGETPYYSLSLWHGVTPALFMSLAAIGIGAVILGAHRPIAA 563 Query: 550 LWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNK 609 +W R + D +A + L + + Sbjct: 564 VWHRLVLPDAKTLFDR-GLEAATRATVAFTDRTQNGSLERYIAMFIGTAVVVGFAGFFGF 622 Query: 610 GLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLIA 669 G P + A A + L Y + +V L+I+ Sbjct: 623 GFVAGDRPTTPASPMAI------VAWAALITATVLVLLHHR--ARYLSLIYIGIVGLVIS 674 Query: 670 IA 671 + Sbjct: 675 LG 676 >UniRef50_Q35099 NADH-ubiquinone oxidoreductase chain 5 n=58 Tax=Metazoa RepID=NU5M_METSE Length = 600 Score = 346 bits (887), Expect = 2e-93, Method: Composition-based stats. Identities = 131/669 (19%), Positives = 250/669 (37%), Gaps = 83/669 (12%) Query: 6 LLTWSLILYLFASLASLFLLGL--DRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVAR 63 + L + L +L S ++ A + ++ ++ T + Sbjct: 1 MYILVLTVPLLGALVSGLFGRKIGEKGAGIFTSGCLIISLSWSLLIFYETTLNFSTTYIK 60 Query: 64 FAPPFEF----ADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMN 119 + A L+ DSL+A M++V++ + + ++S YM +++ Sbjct: 61 LWRWLDSDLVTAYFGLQFDSLTAVMLIVVTSISTLVHIFSTAYMDGDPH--VPRFMSYLS 118 Query: 120 IFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDK-TSINAGMLYFFIAHAGSVLI 178 +F M+ L+ DN + +E + L S+ L+ + + A + + G + Sbjct: 119 LFTFFMILLVTSDNYPQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGF 178 Query: 179 MIAFLLMGRESGSLDFASFRT--LSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHP 236 ++A L + + G LDFAS + + L F G K+ + LH+WLP A Sbjct: 179 VLAMLAIWDQFGCLDFASVFNIVALAPSDNTTLICLFLFIGAVGKSAQLGLHTWLPDAM- 237 Query: 237 AAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYAL 295 P+ SAL + MV G+F +++ + L ++V +G+++A + L Sbjct: 238 EGPTPVSALIHAATMVTAGVFLLIRSSPLL----EQAPMALMVVTIVGSLTAFMAATIGL 293 Query: 296 AEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLL 355 + D+K+++A+ST +G +++A G++ +S LFHL+NHA FK LL Sbjct: 294 VQNDLKKVIAYSTCSQLGYMVMACGLSQYSIS--------------LFHLMNHAFFKALL 339 Query: 356 FLGAGAIISR-LHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSL 414 FL AG++I DM KMG L + +P+T +IG L++ P L GF S+ + Sbjct: 340 FLSAGSVIHALADEQDMRKMGGLIRSIPFTYTMIVIGSLSLMGFPYLTGFYSKDLILELA 399 Query: 415 FSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCG--APRSTHAEEAQEVPN 472 + + A + + L +++ +TF + +A E Sbjct: 400 YDQYYL---------AFAHWLGVFSALLTAAYSLRLIYLTFISNTNAKKEVFSQAHEGSW 450 Query: 473 TMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPS 532 + + ++LLA + + + T Sbjct: 451 NLTLPLILLALGSIFVGYLTKEIIWSFQITLSPIIPTSIK-------------------- 490 Query: 533 LLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVF- 591 L+ ++ ++ L+ S R T GY S + Sbjct: 491 -LMPVIFSLFGAGTAVVLYHYSSRIFNAPTSPVGLAGYT----FLYSAWQFNYIINHFLV 545 Query: 592 SALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGD 651 ++RL + + + + I RL +EI +LQSG Sbjct: 546 QNVWRLGHLI--------------TFRVLDKGVLELIGPKGISQFMIRLTQEISNLQSGL 591 Query: 652 FRLYCLYVV 660 Y L ++ Sbjct: 592 VYNYALMIL 600 >UniRef50_B6YTW6 Hydrogenase 4, component B or formate hydrogen lyase, subunit 3 n=1 Tax=Thermococcus onnurineus NA1 RepID=B6YTW6_THEON Length = 690 Score = 346 bits (887), Expect = 2e-93, Method: Composition-based stats. Identities = 172/628 (27%), Positives = 284/628 (45%), Gaps = 26/628 (4%) Query: 3 ALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVT-LV 61 L T ++ILY + A+L L + +I + I + + + + + ++ Sbjct: 1 MEGLFTLAVILYFLSIPAALALKRSFKASISIGHILTALASIALLAFTFVSIPDILSGKA 60 Query: 62 ARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMG-FFMNI 120 F A + ++D LS M + L + S+YS YM YE G M ++ Sbjct: 61 IEFTYDLGVAQIPFQIDGLSLIMCFIFGALGLAASIYSPRYMAIYEKSGRGWMYITIYSV 120 Query: 121 FIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKT-SINAGMLYFF-IAHAGSVLI 178 F+ SM+ ++ + N FWFI L+E+M+ +S+ L I DK AG YF + ++ + Sbjct: 121 FMLSMILIVTIANMFWFIFLWEVMTFTSYLLTIWESDKEDVRKAGWKYFVTMHIVSTLPL 180 Query: 179 MIAFLLMGRESGS---LDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAH 235 +IA L+ + S L+F S L LSP + L GFG+K+G++PLH W P A+ Sbjct: 181 IIALALLYADVSSIEGLNFESLAALKLSP----VFYALFLIGFGSKSGVVPLHFWAPEAY 236 Query: 236 PAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYAL 295 APS+ SALM+G + K+ ++ +++ ++ +G V +G ++ +G LYAL Sbjct: 237 TVAPSNVSALMAGALEKVAVYALIRTTCFIMKPNE---TFGYAVALLGTVTLTVGTLYAL 293 Query: 296 AEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHD--PLLTVVGLLGALFHLLNHALFKG 353 + D KRLLA+ ++ +G I L +GV +V ++ D + L +L+HL+NH FKG Sbjct: 294 KQTDAKRLLAYHSIGQIGYIWLGMGVGIVFIARGDMYSAFGAIALASSLYHLVNHTFFKG 353 Query: 354 LLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQS 413 LLFL G+I R + D+ ++ LAK MP+TA I ++I+ PP NGF+S+W +QS Sbjct: 354 LLFLSTGSIFYRTRSRDLNQLRGLAKLMPFTALFTFIAAMSIAGTPPFNGFMSKWMIYQS 413 Query: 414 LFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNT 473 F VM + F+K Y F G P + ++A+EVP+ Sbjct: 414 TFLSGNG-------LIVFFGVMALFISAATLASFIKFYTTAFGGEP-TEFTKDAEEVPSP 465 Query: 474 MIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTP-PATVASGIALVPGTFHTQVTPS 532 M++A LA+LC+L+ L S + P ++ A + + LV T + Sbjct: 466 MLIAKGFLASLCILLGLVPSLILPILLSPGAALAGIDVSGLMDTNYWLVTIKAPLMPTGA 525 Query: 533 LLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYG-WENAMAPSGNGVMQPLRVVF 591 L L G+ +L ++T W G +P Sbjct: 526 ESYFKPLLFATLFGVIFLGMYLLFPISKKTYRPWTLGEPVAMEHYKFKAINYYEPFEEYI 585 Query: 592 SALFRLRQQLDPTLRLNKGLAHVTARAQ 619 L+ L G + Sbjct: 586 HPLYHTGHVLSEFGSALIGAVANAYVST 613 >UniRef50_C7NIQ7 NADH:ubiquinone oxidoreductase subunit 5 (Chain L)/multisubunit Na+/H+ antiporter, MnhA subunit n=2 Tax=Kytococcus sedentarius DSM 20547 RepID=C7NIQ7_KYTSD Length = 1003 Score = 345 bits (885), Expect = 4e-93, Method: Composition-based stats. Identities = 124/554 (22%), Positives = 226/554 (40%), Gaps = 43/554 (7%) Query: 7 LTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVT------- 59 + ++ +L A+L + L+ L + V+ +++ +HAG T Sbjct: 1 MLALILAHLVAALCAPMLVRALGSKAFLPLALPSLASVVYLVAKAPAVHAGSTDHPHHEV 60 Query: 60 -----------LVARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEG 108 + +L R+DSLS + +V+ + + +Y + Y + E Sbjct: 61 GQGAGGLPPAVTESWTWVHQLGMNLDFRLDSLSWVLAMVVVFIGTLVLIYCVGYFEDDEP 120 Query: 109 KGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQD-KTSINAGMLY 167 G + F +M+ L+ DN V +E+ S+ S+ L+ R + S +A M Sbjct: 121 -GLGLFAGSLTAFAGAMLGLVTTDNMLVLYVFWEITSVLSFLLIGHRITSRHSRSAAMEA 179 Query: 168 FFIAHAGSVLIMIAFLLMGRESGSLDFASFRTLSL-SPGLASAVFLLAFFGFGAKAGMMP 226 I +G + +++ + +G+ +GS ++ + L +A +L G K+ M+P Sbjct: 180 LIITASGGLAMLVGIVGLGQATGSYSISALMAHPPEAGPLVTASVVLLLVGAITKSAMVP 239 Query: 227 LHSWLPRAHPAAPSHASA-LMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAI 285 H WLP A AAP+ SA L + MVK GI+ I + A W V+ +G Sbjct: 240 FHFWLPGAM-AAPTPVSAYLHAAAMVKAGIYLIARFAPAF----ADLDVWKWTVLLLGGP 294 Query: 286 SALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHL 345 + LLG +L + DIK +LA+ TV +G ++L VG T L L L Sbjct: 295 TMLLGAWRSLRQVDIKLVLAYGTVSQLGFLVLVVGHG-----------TQDAALAGLTLL 343 Query: 346 LNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFI 405 + HALFKG LFL GAI T D+ ++ LA+ MP A + +++ +PPL GF+ Sbjct: 344 VAHALFKGSLFLVVGAIDHCTGTRDLRRLSGLARSMPVLFATACVSAASMAGVPPLLGFV 403 Query: 406 SEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAE 465 S+ + +++ + V + V + + F R+ Sbjct: 404 SK----EGAYTVFNPVEHGWFTVEGVTFVFILVGSMMTFAYSARFLWGAF-RTQRTKPLT 458 Query: 466 EAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTF 525 E + + + LLA +++ L++ + + + + G+ Sbjct: 459 EVHDPGFFLQFSPALLAVCTIVLGLTSKTVLEPWLGNYSGWWAASEHPLHLGLWHGWTPV 518 Query: 526 HTQVTPSLLLLLLL 539 + + +LL Sbjct: 519 LAFTALTFAVGVLL 532 >UniRef50_Q85FH9 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic n=8 Tax=Euphyllophyta RepID=NU5C_ADICA Length = 729 Score = 345 bits (885), Expect = 4e-93, Method: Composition-based stats. Identities = 135/750 (18%), Positives = 254/750 (33%), Gaps = 118/750 (15%) Query: 1 MDALQLLTWSLILYLFAS---------LASLFLLGLDRLAIKLSGITSLVGGVIGIISGI 51 M W + L + G RL L+ + + + + Sbjct: 1 MKLSNEYAWIIPLCPLIASCCTGSLSFFFPRVARGFHRLCALLNVFSLAISMFVSLAIFQ 60 Query: 52 TQLHAGVTLVARFAP---PFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEG 108 Q + ++ +DSL+ M L+++ + V+ +YS +YM Sbjct: 61 EQFVKNPIQQYLWIWIPRSTFCVEIGFLVDSLTLVMSLLVTTVGVLVMIYSDSYMCYD-- 118 Query: 109 KGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKT-SINAGMLY 167 +G ++++F ASM+ L++ N V +E++ + S+ LV ++ + NA Sbjct: 119 RGYTRFYAYLSLFTASMLGLVLSPNLIQLYVFWELVGMCSYLLVGFWFARSSAANACQKA 178 Query: 168 FFIAHAGSVLIMIAFLLMGRESGSLDFASF--------RTLSLSPGLASAVFLLAFFGFG 219 F G +++ L + +GS + + +P L + + L G Sbjct: 179 FVTNRIGDFGLLLGILGIYWTTGSFEISELCDRFAKLKEIGFSNPILTNIIAFLLLAGPV 238 Query: 220 AKAGMMPLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGIL 278 AK+ PLH WLP A P+ SAL + MV GIF I ++ + + L Sbjct: 239 AKSAQFPLHVWLPDAM-EGPTPISALIHAATMVAAGIFFIARIYGLISTLPLVMQASSWL 297 Query: 279 VMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGL 338 A ALLG ALA++D+K+ LA+ST+ +G ++LA+G+ Sbjct: 298 GGAT----ALLGATLALAQRDLKKGLAYSTMSQLGYMVLALGIG--------------AY 339 Query: 339 LGALFHLLNHALFKGLLFLGAGAIISRL---------HTHDMEKMGALAKRMPWTAAACL 389 ALFHL+ HA K LLFLGAG++I + + +M MG L K MP T L Sbjct: 340 QSALFHLVTHAYSKALLFLGAGSVIHSIEKVVGYSPNRSQNMFFMGGLRKYMPITGTTFL 399 Query: 390 IGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAV---MC 446 +G L++S IPPL F S+ + S + + + L C Sbjct: 400 LGTLSLSGIPPLACFWSKDEIIHESWLSSLPLGILASGTAGLTAFYMFRIYLLTFEGDFC 459 Query: 447 FVKMYGITF----------CGAPRS----------------------------------- 461 +K + F G Sbjct: 460 TIKTDWVDFNHFAPLSISMWGETEGNLSLNQINQNVASVRLGITKNKGFSSSYLANPNGI 519 Query: 462 ------THAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVA 515 + +E + M ++++LA L+ L + T ++ Sbjct: 520 TNVHYDQSLPKPKESSSAMTFSLVMLAIPTTLVGLL----------GINLIGETANFELS 569 Query: 516 SGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENA 575 + P F + + +L + + + + Sbjct: 570 PEWLINPVHFFELSKSFNIYIKILLNSRSSLILSFFGIFFSFIIYKKSYKYFYITKKLVG 629 Query: 576 MAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVS 635 + ++ + D + L ++ + + + + I + Sbjct: 630 FTKLVSKFGLLVQSWSLNRGYIDYYYDICFV--RNLRSLSKSLSDFDRYGIDGFVNVIGA 687 Query: 636 ATQRLAKEIQHLQSGDFRLYCLYVVAALVV 665 + I++ ++G Y ++ ++ Sbjct: 688 LNFFGGEFIRYGENGRISYYLFIIIFGAIL 717 >UniRef50_A6TVL5 NADH dehydrogenase (Quinone) n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TVL5_ALKMQ Length = 498 Score = 345 bits (885), Expect = 4e-93, Method: Composition-based stats. Identities = 124/515 (24%), Positives = 230/515 (44%), Gaps = 29/515 (5%) Query: 1 MDALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTL 60 M ++ + L+L L +++ G K + L +S + + + Sbjct: 1 MSSIHFPVYILLLLLISAILIPLKKGDYDDGFKWEMMGVLGLAWALSLSLLIFVLRDQSF 60 Query: 61 VARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYE-GKGAAAMGFFMN 119 F + +D SA M LV+ + + +YSL + + + + Sbjct: 61 TYTFGQWNPTIGIEFVVDEFSALMTLVVLSVATLIIIYSLKDIEHEILKEQFFSYYTLIF 120 Query: 120 IFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIM 179 + + SM+ ++ ++ F V E++SL+S ++ ++ K ++ A Y + GSV I+ Sbjct: 121 LLLFSMIGMIFTNDLFNLYVFMEILSLTSCGIISIKRKKENLMASFKYLMLGAIGSVSIL 180 Query: 180 IAFLLMGRESGSLDFASFRTLSLS-----PGLASAVFLLAFFGFGAKAGMMPLHSWLPRA 234 + L+ +G L+ + + P GFG KA + PLH WLP A Sbjct: 181 MGIALLYMVTGHLNMTAAYEVITQVWQSYPRNILIALGFILTGFGIKAAIFPLHIWLPDA 240 Query: 235 HPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGL-PLWWGILVMAIGAISALLGVLY 293 H AP+ +SAL+SG++VK+ +F I K+ +L Q + + + +S ++G ++ Sbjct: 241 HSNAPTPSSALLSGLVVKVYVFAIAKILFRVLGQDIVQSIGVTEFITYFAVLSMIMGSVF 300 Query: 294 ALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKG 353 A+ + DIKRLLA+S+V +G I L +G+A T +G LFH++ HAL K Sbjct: 301 AIGQTDIKRLLAYSSVAQIGYIFLGLGLA-----------TELGFSAGLFHVITHALMKS 349 Query: 354 LLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQS 413 LFL AGAII + D+ + + +MP T + L + IP LNGF+S+WY + Sbjct: 350 ALFLSAGAIIYQTGKRDIRDLDGIGYQMPITMGVFSVAALGMIGIPGLNGFMSKWYLSLA 409 Query: 414 LFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQE-VPN 472 + + P+ ++M+ ++ L + ++ + F + +P Sbjct: 410 VLEADK----------PVFLIMILISSFLNAIYYLPIIIAAFLKESNERDNVMVLDRLPK 459 Query: 473 TMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFT 507 TM+ M+++A CV++ + + F Sbjct: 460 TMMYPMVIIAIGCVVMGFFPHIVMDVVERAVPTFL 494 >UniRef50_A1ASR6 NADH dehydrogenase (Quinone) n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ASR6_PELPD Length = 633 Score = 344 bits (884), Expect = 5e-93, Method: Composition-based stats. Identities = 154/625 (24%), Positives = 278/625 (44%), Gaps = 36/625 (5%) Query: 1 MDALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGV-- 58 M Q + S+ + ++ +L L L+ LS +T + GV+ + + L +G Sbjct: 1 MTPEQAVLLSIGICAAGAVVTLLLSMSKSLSGWLSFLTMVASGVLIVPRAVQVLTSGPAN 60 Query: 59 TLVARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFM 118 L L +D LS+ +L+ L+ V +LYS+ ++ ++ K AA F+ Sbjct: 61 PHHPEAFYTLGGHTLRLYVDGLSSIFLLLAVLIGVCAALYSIVHVEKFPTKSAAMYHPFL 120 Query: 119 NIFIASMVALLVMDNAFWFI-VLFEMMSLSSWFLVIARQDKTSIN-AGMLYFFIAHAGSV 176 +F+ M +L + + WF +++M++ S+ L++ +K I A Y A V Sbjct: 121 LLFVGGMYGILSITDTMWFFCAFWQLMTIPSFILMLFESEKPGIKGAAFKYLVFMEAAMV 180 Query: 177 LIMIAFLL---------MGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPL 227 M + + + L ++ +PG + L GFG K GM P Sbjct: 181 AAMAGAAMIAGGPAEPGLAYDFDVLSEGIPALVATNPGALTGCLALFLVGFGIKVGMWPF 240 Query: 228 -HSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLW----WGILVMAI 282 W+P A+ AAPS +AL+SGVM K G++G+++ + L+ L + WG+ + + Sbjct: 241 GQLWVPDAYAAAPSPVTALISGVMSKTGVYGLMRTFLWLVPADVLGQYDMSRWGMALAIL 300 Query: 283 GAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDP---LLTVVGLL 339 G I+ G + + + D KRLLA+S+V +G I+LA+G + + D L + Sbjct: 301 GTITLFTGTMQGMKQDDTKRLLAFSSVGQLGYIILALGACVALVPSGDNRLLALAAIAFC 360 Query: 340 GALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIP 399 G L H +NH +FKGLLF AG++ T D+ KMG L K MP T A LI I+ +P Sbjct: 361 GGLLHAINHGIFKGLLFFSAGSLYQATGTQDLNKMGGLWKYMPVTGFAVLIASFGIAGVP 420 Query: 400 PLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAP 459 LNGF+S+W + + S + ++ +T + + ++K +G+ F Sbjct: 421 LLNGFVSKWSIYVATIQGSTSAK-----YLAVCAIIAILTSAMTLAMYIKFFGVAFLSRQ 475 Query: 460 RSTHAEEAQ-----EVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATV 514 + ++A EV T + L++A LC++I L+ + + + + + Sbjct: 476 STVVKQQAAKQGNLEVGMTQQLPQLIMALLCIVIGLAPGAVYQVLGQVLNTSRQGFAEKL 535 Query: 515 ASGIALVPGTFHTQVT----PSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGY 570 A + G + +++ + + + + + R++GDAW CGY Sbjct: 536 ADANTMSAGATTGLFAIGGGALYVPIVIAIVLAVAFVIVYTFSKQGGSTRKSGDAWLCGY 595 Query: 571 GWENA-MAPSGNGVMQPLRVVFSAL 594 E + + ++ F L Sbjct: 596 AREEECYRYAASNFYGEIKRCFGWL 620 >UniRef50_P56752 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic n=1715 Tax=cellular organisms RepID=NU5C_ARATH Length = 746 Score = 344 bits (882), Expect = 8e-93, Method: Composition-based stats. Identities = 121/478 (25%), Positives = 199/478 (41%), Gaps = 58/478 (12%) Query: 6 LLTWSLILYLFASLASLFLL----GLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLV 61 + L + + + L L R+ LS + + I I Q+ Sbjct: 11 IPFIPLPVPILLGVGLLLFPTATKNLRRMWTFLSIFLLSIVMIFSIYLSIQQIFLSCIHQ 70 Query: 62 ARFAPPF---EFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFM 118 ++ + +D L++ M ++I+ + ++ +YS YM +G +M Sbjct: 71 NVWSWTINNEFSFEFGYFIDPLTSIMSILITTVGILVLIYSDNYMSHDQG--YLRFFAYM 128 Query: 119 NIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKT-SINAGMLYFFIAHAGSVL 177 F SM+ L+ N +E++ + S+ L+ + + NA F G Sbjct: 129 GFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFG 188 Query: 178 IMIAFLLMGRESGSLDFASFRTLS--------LSPGLASAVFLLAFFGFGAKAGMMPLHS 229 +++ L + +GS +F + ++ + L F G AK+ PLH Sbjct: 189 LLLGILGLYWITGSFEFQDLFEIFNNLILNNRVNLLFLTLCAFLLFVGPIAKSAQFPLHV 248 Query: 230 WLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISAL 288 WLP A P+ SAL + MV GIF + ++ + + ++ IG I+ L Sbjct: 249 WLPDAM-EGPTPISALIHAATMVAAGIFLVARLLPLFI----VIPSIMYIISLIGIITVL 303 Query: 289 LGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNH 348 LG ALA++DIKR LA+ST+ +G ++LA+G+ ALFHL+ H Sbjct: 304 LGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRS--------------ALFHLITH 349 Query: 349 ALFKGLLFLGAGAIISRL---------HTHDMEKMGALAKRMPWTAAACLIGCLAISAIP 399 A K LLFLG+G+II + + +M MG L K +P T A LIG L++ IP Sbjct: 350 AYSKALLFLGSGSIIHSMEAIVGYSPDKSQNMILMGGLTKHVPITKTAFLIGTLSLCGIP 409 Query: 400 PLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCG 457 PL F S+ L PI ++ T GL ++Y +TF G Sbjct: 410 PLACFWSKDEILNDSL-----------LFSPIFAIIACSTAGLTAFYMFRIYLLTFEG 456 >UniRef50_Q47T29 NADH dehydrogenase (Quinone) n=4 Tax=Actinomycetales RepID=Q47T29_THEFY Length = 982 Score = 343 bits (880), Expect = 1e-92, Method: Composition-based stats. Identities = 105/537 (19%), Positives = 200/537 (37%), Gaps = 26/537 (4%) Query: 6 LLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFA 65 ++ + + A+LA + R A + + + + L Sbjct: 1 MIWLLVAHFTAAALAPALVRKWGRQAFFALALVPASAAIWALPRAPGVIAGEPELFFLPW 60 Query: 66 PPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASM 125 P L RMD+LS M+L+ + + + LY Y + E G + F +M Sbjct: 61 APNYQLALAFRMDALSLVMLLLAAGIGALILLYCARYFSDDEP-GLGRFAGVLTGFAGAM 119 Query: 126 VALLVMDNAFWFIVLFEMMSLSSWFLVIAR-QDKTSINAGMLYFFIAHAGSVLIMIAFLL 184 + L++ ++ + +E+ ++ S+ L+ + + + A + + G + +++ ++ Sbjct: 120 IGLVLANDLIQLYLYWELTTVFSYLLIGHYPERRDNRRAAAMAINVTTMGGLTMLVGLVI 179 Query: 185 MGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASA 244 +G +G+ + S + +L G +K+ + P WLP A AP+ SA Sbjct: 180 LGESAGTYLISGILAEPPSGTAVTVALVLILVGALSKSAIFPFSLWLPAAM-QAPTPVSA 238 Query: 245 -LMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRL 303 L + MVK G++ I ++ G W + +G + + AL + D+K L Sbjct: 239 YLHAAAMVKAGVYLIARLTPAF----GDIPAWQYTAVILGTATMIGSGWRALRQHDLKLL 294 Query: 304 LAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAII 363 LA TV +G + G+ T L L L HALFK LFL G I Sbjct: 295 LAHGTVSQLGFLTAIFGIG-----------TRDAALAGLAMLCAHALFKAPLFLVVGIID 343 Query: 364 SRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAV 423 T D+ ++ L K+MP ++ ++++ +PP+ GF ++ + + + A Sbjct: 344 HSTGTRDLRELSGLRKKMPVVFWTSVVALMSMAGLPPMAGFAAKEAAFGAFEHADTLLAT 403 Query: 424 ALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAA 483 +A+ + V V ++ F ++ + ++LAA Sbjct: 404 -------LALAGVVVGTLFTVGYSLRFLWGAFFDKENTSPTPLLHPPGPLFVAPAIVLAA 456 Query: 484 LCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLA 540 L +L AS P A + L LLL Sbjct: 457 LSLLGGFGASLADPVFASYADTVPGAGHDPAHLALWHGFSLPLLLTALCLAGGLLLF 513 >UniRef50_A5GD02 Proton-translocating NADH-quinone oxidoreductase, chain L n=7 Tax=Geobacter RepID=A5GD02_GEOUR Length = 666 Score = 343 bits (880), Expect = 1e-92, Method: Composition-based stats. Identities = 136/683 (19%), Positives = 246/683 (36%), Gaps = 92/683 (13%) Query: 28 DRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAPPFEF-ADLTLRMDSLSAFMVL 86 R+A L+ V V + + + + + F+F A +TL +D LS MVL Sbjct: 28 RRIAETLACGVVWVSFVCSLSAFVAYRAPLKVELGSWLAAFDFKAPITLYLDPLSLVMVL 87 Query: 87 VISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSL 146 +I+ + + +Y++ YM + A +N+F+ +M+ L++ +N + +E + Sbjct: 88 MITFVCGLIHVYAVGYMADDPD--YARFFALLNLFVFAMLVLVLAENLPLLYLGWEGVGF 145 Query: 147 SSWFLVIARQDKT-SINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRTLS--LS 203 S+ L+ + + AG F + G IA + M + ++ L + Sbjct: 146 CSYALIGFWYREEKNATAGRKAFIVTRIGDTAFGIAVVWMFQLFSTVSITELNGLGFLMP 205 Query: 204 PGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASA-LMSGVMVKIGIFGILKVA 262 G+ +A+ LL G K+ +PL WLP A A P+ SA + + MV G++ + ++ Sbjct: 206 AGVITALGLLLLIGAMGKSAQLPLMVWLPDAM-AGPTPVSAQIHAATMVTAGVYLLARMF 264 Query: 263 MDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVA 322 + G + G ++A ALA++D+KR+LA+ST+ +G ++L VG Sbjct: 265 PLI----GASATVQGAIALTGGLTAFYAASCALAQRDLKRVLAYSTISQIGYMMLGVGCG 320 Query: 323 MVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRL-HTHDMEKMGALAKRM 381 + A FHLL HA FK LLFL AG +I+ L H D+ +MG L + + Sbjct: 321 --------------AITAATFHLLVHAFFKALLFLAAGCVITALHHEQDIFRMGGLRRNL 366 Query: 382 PWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGG 441 P T L G + ++ +P GF S+ + + + L L G T Sbjct: 367 PLTFWPFLAGAVCLAGLPLTGGFFSKDAILTAAWGKGGLLYGGLYLLGLF-------TAL 419 Query: 442 LAVMCFVKMYGITF---------------------------------CGAPRSTHAEEAQ 468 L + +M + F G+P S + Sbjct: 420 LTSVYTFRMVYLVFGGTQQIPPFEKGGLGWISTAGHGQIPLSPLGPPFGSPLSKGEAQHL 479 Query: 469 EVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQ 528 VP M ++ LA L + + ++ + AT G Sbjct: 480 HVPRLMEWTLIPLALLGLFGGIINLP-----EYLTGGWLGQFLATTVKGGTTSVSHGEEL 534 Query: 529 VTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLR 588 + LL LA + + G + L Sbjct: 535 ALQGIAALLALAGLAVVHRRY-------------------GGDRREKRLVAAVAPAAGLT 575 Query: 589 VVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQ 648 + + E D+ + + + + + Sbjct: 576 AFLLNGWYADSLYRFLFIRPYEALARIFWERVDEGMIDDSL-DRLAFFLGKSGERLGAWT 634 Query: 649 SGDFRLYCLYVVAALVVLLIAIA 671 +G +Y L + A L +++ A Sbjct: 635 TGRVSVYLLSLAAGLGLIVAYFA 657 >UniRef50_A2T411 NADH-ubiquinone oxidoreductase chain 5 n=7 Tax=Metazoa RepID=A2T411_9METZ Length = 678 Score = 343 bits (880), Expect = 1e-92, Method: Composition-based stats. Identities = 136/722 (18%), Positives = 251/722 (34%), Gaps = 110/722 (15%) Query: 6 LLTWSLILYLFASLASLFLLGLDRLAIK--LSGITSLVGGVIGIISGITQLHAGVTLVAR 63 + L L + F L LS I +I L + Sbjct: 1 MYLLVLFLPFINAFFLGFFGRLIGTTGSGILSTICMGSSTLIAFFLAYEVLVNDAVVHIE 60 Query: 64 FAPPF----EFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMN 119 + L D+LS M+LVIS + + +YS +YM + +++ Sbjct: 61 LYKWIESEIFITHIGLLFDTLSVTMLLVISSISTLVHIYSTSYMSDDPH--VPRFICYLS 118 Query: 120 IFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDK-TSINAGMLYFFIAHAGSVLI 178 +F M+ L+ DN + +E + + S+ LV + + A + + G V + Sbjct: 119 LFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWTTRIQANKAAIKAIVVNRVGDVGV 178 Query: 179 MIAFLLMGRESGSLDFASFRTLSLSPGLA-----------------SAVFLLAFFGFGAK 221 ++ +L+ + GSLDF +F S+ G+ + + +L G K Sbjct: 179 ILGMVLIYKTIGSLDFLTFNGGSIGSGIMDRGYSEGRANGAPLAPFAIIGILLLIGCIGK 238 Query: 222 AGMMPLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVM 280 + + LH+WLP A P+ SAL + MV G+F +++ + +++ Sbjct: 239 SAQLGLHTWLPDAM-EGPTPVSALIHAATMVTAGVFLMIRSFPLF----EKAPFTLLIIT 293 Query: 281 AIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLG 340 GA++A L + D+K+++A+ST +G ++L +G+ Sbjct: 294 IFGALTAFFAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIEGSQNV------------- 340 Query: 341 ALFHLLNHALFKGLLFLGAGAIISRL--HTHDMEKMGALAKRMPWTAAACLIGCLAISAI 398 LFHL+NHA FK LLFL AG++I + DM KMG L +P+T LIG +I + Sbjct: 341 GLFHLVNHAFFKALLFLSAGSVIHSMTIDEQDMRKMGGLIHSIPFTYTMMLIGSFSIMGL 400 Query: 399 PPLNGFISEWYTWQSLFSLS---------------------------RVEAVALQLAGPI 431 P L GF S+ + + + + A Sbjct: 401 PYLTGFYSKDLILELTYFCKNMAIPDRGSIGSPELYIQKDLGDPYPVQAYGLGPFRASAF 460 Query: 432 AMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEA-QEVPNTMIVAMLLLAALCVLIAL 490 A + V L +++ ITF P S + + +L+ LC Sbjct: 461 AFWLGTVAALLTAFYSIRLVYITFIITPNSPKESLISSHINIVDKRVLTVLSLLCFGAIF 520 Query: 491 SASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWL 550 + ++ H V P + ++ GL Sbjct: 521 VGYLIQDILIGDIE---------------------HPIVPPFVKVMPTFMGLFGMGLCLW 559 Query: 551 WCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKG 610 R+ G+ G+ + + S ++ ++ + + Sbjct: 560 AQRASSLLPLYRGNP-------------LGSSFLLSIYSFLSGAWQGDHLINKLVAIPLF 606 Query: 611 LAHV-TARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLIA 669 + + + I + R+++ I +LQSG Y L ++ ++ Sbjct: 607 SFGHWGIYKTLDRGWLELFGPQGISTIALRVSQFISNLQSGVISRYALVFLSFTIIFAAL 666 Query: 670 IA 671 A Sbjct: 667 WA 668 >UniRef50_C1AB28 NADH-quinone oxidoreductase chain L n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1AB28_GEMAT Length = 631 Score = 342 bits (879), Expect = 2e-92, Method: Composition-based stats. Identities = 155/674 (22%), Positives = 253/674 (37%), Gaps = 83/674 (12%) Query: 3 ALQLLTWSLILYLFASLA------SLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHA 56 L +L L + +L A L G + + IS L A Sbjct: 1 MSHTLALIALLPLVGFVLNGTFATALGGHRFGHRAAALIGCAAPLASFALTISAFLSLQA 60 Query: 57 G------VTLVARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKG 110 L D+ D LSA M L+++ + V +YS YM ++ K Sbjct: 61 NGYAPVVEPLYRWATVGGNSFDIAFYFDRLSAIMTLIVTGVGSVIHIYSTGYM--HDDKS 118 Query: 111 AAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTS-INAGMLYFF 169 ++N+F+ M+ L++ + V +E + L+S+ L+ D + AG F Sbjct: 119 FGRFFAYLNLFLFFMLLLVLGRSMLVLFVGWEGVGLASYLLIGFWFDDLANAAAGRKAFI 178 Query: 170 IAHAGSVLIMIAFLLMGRESGSLDFASFRTLSLSPG----LASAVFLLAFFGFGAKAGMM 225 G ++ L+ R G+LD + ++ AS V LL F G K+ + Sbjct: 179 TNRIGDAGFLLGMFLLYRAFGTLDMDTINGALVAGQGAMISASLVALLLFVGATGKSAQI 238 Query: 226 PLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGA 284 PL+ WLP A A P+ SAL + MV G++ + +++ A L ++ IG Sbjct: 239 PLYVWLPDAM-AGPTPVSALIHAATMVTAGVYLVARMS----AVYVLAPDASQVMAVIGV 293 Query: 285 ISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFH 344 ++A AL + DIK++LA+STV +G + LA+GV G+ A+FH Sbjct: 294 LTAFFAATIALVQTDIKKVLAYSTVSQLGFMFLALGVGAYGV--------------AIFH 339 Query: 345 LLNHALFKGLLFLGAGAIISRL-HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNG 403 ++ HA FK LFLGAG++I L D+ KMG L KR+P T I AI+ IP L G Sbjct: 340 VMTHAFFKACLFLGAGSVIHALGGEQDIRKMGGLRKRIPVTFWTFAIATAAIAGIPGLAG 399 Query: 404 FISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTH 463 F S+ FS + A + A+T + ++ +TF GA R +H Sbjct: 400 FFSKDEILWYAFSSASGGA-------AWMWGLAALTALMTAFYMTRLLWLTFFGASRMSH 452 Query: 464 --AEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALV 521 E P +M + +LA L V+ +V Sbjct: 453 EVEHHVHESPLSMTGVLGVLAVLSVVGGYIGVP--------------HFLEPQLPLPQVV 498 Query: 522 PGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGN 581 P H + T + + L + ++ + R Sbjct: 499 PALEHYEHTLLYVSVALAFGGVGLAVFLYSGPASRPESIART------------------ 540 Query: 582 GVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLA 641 PL + S + + + D L + + + + + + R A Sbjct: 541 --FAPLHALLSGKYFVDELYDRALGRPLVWISENVLLKGGDRMLLDGTLNGLGAMAHRTA 598 Query: 642 KEIQHLQSGDFRLY 655 +Q+G LY Sbjct: 599 ALFARVQTGSLHLY 612 >UniRef50_B1NWJ6 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic n=3586 Tax=root RepID=NU5C_MANES Length = 752 Score = 342 bits (879), Expect = 2e-92, Method: Composition-based stats. Identities = 117/478 (24%), Positives = 202/478 (42%), Gaps = 58/478 (12%) Query: 6 LLTWSLILYLFASLASLFLL----GLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLV 61 + +L + + L L R+ S + + I I Q+++ Sbjct: 11 IPFVTLPVPMLIGAGLLLFPAATKKLRRMWAFPSVFLLSIVMIFSIDLSIQQINSSFIYQ 70 Query: 62 ARFAPPF---EFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFM 118 ++ + +D L++ + ++I+ + ++ YS YM +G +M Sbjct: 71 YIWSWTINNDFSLEFGHLIDPLTSILSVLITTVGILVLFYSDNYMSHDQG--YLRFFAYM 128 Query: 119 NIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKT-SINAGMLYFFIAHAGSVL 177 + F SM+ L+ N + +E++ + S+ L+ + + NA F G Sbjct: 129 SFFTTSMLGLVTSSNLIQIYIFWELVGVCSYLLIGFWFTRPIASNACQKAFVTNRVGDFG 188 Query: 178 IMIAFLLMGRESGSLDFASFRTL--------SLSPGLASAVFLLAFFGFGAKAGMMPLHS 229 +++ L + +GS +F + ++ + +L F G AK+ PLH Sbjct: 189 LLLGILGLYWITGSFEFRDLFKIFNNLIYNNQVNFLFVTLCAVLLFSGAIAKSAQFPLHV 248 Query: 230 WLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISAL 288 WLP A P+ SAL + MV GIF + ++ + + + L+ IG I+ Sbjct: 249 WLPDAM-EGPTPISALIHAATMVAAGIFLVARLFPLFV----IIPFIMNLIALIGIITVF 303 Query: 289 LGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNH 348 LG ALA++DIKR LA+ST+ +G ++LA+G+ ALFHL+ H Sbjct: 304 LGATLALAQKDIKRSLAYSTMSQLGYMMLALGMG--------------SYRAALFHLITH 349 Query: 349 ALFKGLLFLGAGAIISRL---------HTHDMEKMGALAKRMPWTAAACLIGCLAISAIP 399 A K LLFLG+G+II + + +M MG L K +P T A L+G L++ IP Sbjct: 350 AYSKALLFLGSGSIIHSMEAILGYSPDKSQNMVLMGGLTKHIPITKTAFLLGTLSLCGIP 409 Query: 400 PLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCG 457 P F S+ + L PI ++ T GL ++Y +TF G Sbjct: 410 PFACFWSKDEILNDSW-----------LYSPIFAIIACFTAGLTAFYMFRVYLLTFDG 456 Score = 55.6 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 25/209 (11%), Positives = 59/209 (28%), Gaps = 5/209 (2%) Query: 467 AQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFH 526 E NTM+ ML+L + I + + + L+ Sbjct: 541 PHESDNTMLFPMLILVLFTLFIGAIGIPFNQFNQEGMLLDIDILSKLLTPSLNLLHQNPE 600 Query: 527 TQVTPSLLL--LLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVM 584 V + A G++ + + + + + ++ Sbjct: 601 NSVDWYEFVTNATFSASIAFFGIFIASFLYKPVYSSLQNLNFFNSFAKKGPKRILWDKII 660 Query: 585 QPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEI 644 + S + + G+ + + + + + + + I Sbjct: 661 NVIYNWSSNRGYIDAFYAISFI--GGIRKLAELIHFFDKQIIDGTPNGVGVTSFFVGEGI 718 Query: 645 QHLQSGDFRLY-CLYVVAALVVLLIAIAV 672 +++ SG Y Y+ AL+ LLI +V Sbjct: 719 KNVGSGRISFYLLFYLFYALIFLLIYYSV 747 >UniRef50_C4LLM4 Na(+)/H(+) antiporter subunit n=3 Tax=Corynebacterium RepID=C4LLM4_CORK4 Length = 999 Score = 342 bits (878), Expect = 3e-92, Method: Composition-based stats. Identities = 125/570 (21%), Positives = 241/570 (42%), Gaps = 41/570 (7%) Query: 4 LQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGI-----ISGITQLHAGV 58 ++L+ L + L L LF+ LDR A + + + + I V Sbjct: 1 MELIAIPLFVVLALILVPLFVRLLDRNAGWPLALIFIASAIPLLRKLPDIIDGNPWTWKV 60 Query: 59 TLVARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFM 118 T + F P +LR D+LS F L+ + +YS Y+ + G+G+ + M Sbjct: 61 TWIEDFLPNGADVIFSLRADALSTFFALLALGIGAAVFIYSTRYL--HGGRGSMSFYLLM 118 Query: 119 NIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLI 178 F+A++V L++ D+ + +E++SL+S+FL+ R M + G + + Sbjct: 119 TAFMAAVVTLVLADDVILMFISWELVSLASFFLIA-RSGPGGELGSMRTIILTFFGGLTL 177 Query: 179 MIAFLLMGRESGSLDFASFR---TLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAH 235 + + + +G+ + + P L S + +L K+ P H WLP A Sbjct: 178 LTSLGISAGVTGTTSLSGIIHSPEWAHHPTLLSVIAVLIATSACTKSAQFPFHFWLPEAM 237 Query: 236 PAAPSHASA-LMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYA 294 AA + SA L + +VK GI+ +L+ + WW L++ +G +A++ L+A Sbjct: 238 -AADTPVSAFLHAAAVVKAGIYLLLRFSALFHDDA----WWRGLLIIVGMFTAIMAALFA 292 Query: 295 LAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGL 354 L + D+K+L A+STV +G I+ +G+ T + + A+ H L HALFK Sbjct: 293 LQKNDLKKLTAYSTVSQLGWIVCTIGIG-----------TPLAMAAAVVHTLAHALFKSS 341 Query: 355 LFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSL 414 LF+ G + + T D+ ++G + ++MPWT + +I +++A+PPL GFIS+ ++ Sbjct: 342 LFMLIGVVDHQTGTRDIRRLGPIWRKMPWTFSMAVIAATSMAAVPPLFGFISKEGMLDAM 401 Query: 415 FSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTM 474 A + ++ V L + F R + E P ++ Sbjct: 402 AE-----GELATPATALLLICATVGAILTFAYSYRYVFGGFVDGTRD--VSDVHEAPLSL 454 Query: 475 IVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLL 534 + + L + + ++ + A + +T AT + L+ Sbjct: 455 WLPAAIPGFLSLPLGFVPGFMNSFVDAAADSALSTHHAT------HTHLALFHGINVPLM 508 Query: 535 LLLLLAMPLLPGLYWLWCRSRRAAFRRTGD 564 + L++ + + + + +R + Sbjct: 509 ISLIVIVVGVTCVVFRKAIARVLVGKELSP 538 >UniRef50_C6HVM9 Putative formate hydrogenlyase subunit 3 (HyfB) n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HVM9_9BACT Length = 682 Score = 342 bits (878), Expect = 3e-92, Method: Composition-based stats. Identities = 203/681 (29%), Positives = 313/681 (45%), Gaps = 17/681 (2%) Query: 2 DALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLV 61 + L +L+ LF LA ++G + + +SG+ L Sbjct: 6 SPIFLTLAALLTLLFTGLAGAGVVGRRPSLASFFFTLLSLESLAIALSGLLPLVTTSDTR 65 Query: 62 ARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIF 121 LR+D LS F +L++ LYS Y + + A +F Sbjct: 66 LILPGGIPGLSFHLRLDPLSGFFLLLLGGASAGVLLYSAGYTKNEAPEKKAQFLAKTTVF 125 Query: 122 IASMVALLVMDNAFWFIVLFEMMSLSSWFLV-IARQDKTSINAGMLYFFIAHAGSVLIMI 180 + + + + + F++ +E+M+++S+FL+ + A L +AH GS+LI+ Sbjct: 126 LFFTGGVFLAADVYSFMLFWEIMAVASFFLILSGENTEGVRRASYLTLLLAHGGSMLIVT 185 Query: 181 AFLLMGR--------ESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLP 232 AF L+ S F + + LS G A V LL GFGAKAG++PLH WLP Sbjct: 186 AFALLATRELPSGSLTMASFSFEALKMNHLSSGEALLVSLLFLLGFGAKAGVVPLHVWLP 245 Query: 233 RAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVL 292 AHPAAP+ ASAL+SGVM+K I+G+++ DL+ L +GIL++ GA AL G+L Sbjct: 246 LAHPAAPAPASALLSGVMLKAAIYGLIRALFDLVGLPQLAPSFGILLLVTGAFMALFGIL 305 Query: 293 YALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFK 352 +A+ + D K LLA+S++EN+G+ILL G+ ++ L PL + L AL+H LNHA FK Sbjct: 306 HAILQSDTKTLLAYSSIENIGLILLGTGLGILYLKTGHPLAGTLALCAALYHALNHAFFK 365 Query: 353 GLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQ 412 LLFLGAG +I ++ +MG L K+MP + A LI L+IS IPP NGF+SEW Q Sbjct: 366 ALLFLGAGTMIHATGETNLNRMGGLFKKMPVSGALVLIAVLSISGIPPTNGFVSEWLLLQ 425 Query: 413 SLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPN 472 S + + A +L + LA M F+K +G+ + G PRS A A E Sbjct: 426 STLQARDLLGTIQRSAVLFGAAILVLASALAAMGFLKFFGVGYLGQPRSDGARAAHECSL 485 Query: 473 TMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPS 532 + M LA + + L S + +I+ T+T + + PS Sbjct: 486 FERLGMGGLAMGSLFLGLFPSLVLGEILKAVSPLTSTTLPSPSGAYGWAWLLPLPPAGPS 545 Query: 533 LLLLLLLAMPLLPGLYWLWCRSRRA-AFRRTGDAWACGY-GWENAMAPSGNGVMQPLRVV 590 L LL + ++ L LW RR W CGY + QP+R Sbjct: 546 TSPLFLLLLLVILTLPVLWLVLGTEGKKRRLSIPWGCGYRDSYRRSQATAESFAQPIRHF 605 Query: 591 FSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSG 650 F F +++ L + E + RP+ +A+ + ++SG Sbjct: 606 FPVFFSMKRHLPSPDDPDPVFLLS------VEDPHWPLLYRPLFRLFVAIAEGAERVRSG 659 Query: 651 DFRLYCLYVVAALVVLLIAIA 671 +Y +Y L++LL + Sbjct: 660 RISIYLIYSFTTLILLLSVLR 680 >UniRef50_Q9HJK6 NADH dehydrogenase, chain L related protein n=6 Tax=Thermoplasmatales RepID=Q9HJK6_THEAC Length = 635 Score = 341 bits (876), Expect = 4e-92, Method: Composition-based stats. Identities = 122/668 (18%), Positives = 248/668 (37%), Gaps = 66/668 (9%) Query: 4 LQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVAR 63 + + W + + ++G I S + I S IT + Sbjct: 3 MYIYGWMIFISPLIGFLLTLIIGKYYRRWS-GAIASFFIFLAFIFSVITYFTVIKHPIYN 61 Query: 64 FAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIA 123 F D + +D+L+ M +++S + ++ L+++ YM++ K +F A Sbjct: 62 SYTWFYNIDFGIYIDNLAIVMAMMVSFVSLMIHLFAIYYMKDDPNKHV--YFAETALFTA 119 Query: 124 SMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQ-DKTSINAGMLYFFIAHAGSVLIMIAF 182 M+ L++ N + +E++ L S+ L+ + A F + G + +I Sbjct: 120 GMLGLVISSNLVLLFLFWELVGLCSYLLIGFWFFKPNATAAAKKAFIVTRVGDLSFIIGM 179 Query: 183 LLMGRESGSLDFASFR-----------TLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWL 231 ++ ++ +++ + + K+ PLH W+ Sbjct: 180 SILYYSLINVTKDPLSIPYLISNASSIAVAIGKVRLGIIAIFILGAAIGKSAQFPLHVWI 239 Query: 232 PRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGV 291 P A + ++ + + MV G++ + ++ L + V +G+ +AL Sbjct: 240 PDAMEGPTTVSALIHAATMVTAGVYLVARLFQVFLYAA---PFAMYAVAIVGSFTALYAG 296 Query: 292 LYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALF 351 + L D+KR+LA+ST+ +G +L A+G+A P++ V + +FHL++HA+F Sbjct: 297 IVGLVVNDVKRILAYSTISQLGYMLAAIGLA--------PIIGGVAVSLGMFHLISHAIF 348 Query: 352 KGLLFLGAGAIISR-LHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYT 410 K LLF+ AGA + + D ++MG L KRMP T IG LA+ A P +G+ S+ Sbjct: 349 KALLFMSAGAFLVAMMDLRDAKQMGGLWKRMPVTTTLFFIGSLALVAFPGTSGYFSKDPI 408 Query: 411 WQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEV 470 F+ +L +AG + ++ L L + +M+ + G PRST AE A++ Sbjct: 409 I---FASYNYFTKSLSVAGFLPLLFLMTGSLLTTLYTFRMFFLVAVGKPRSTLAERARDP 465 Query: 471 PNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVT 530 P ++ +++L+ +++ + + + A Sbjct: 466 PIVALLPLMVLSIFALILGVWQVPFYSFVKPTLDLSPYSVSVPTAP-------------- 511 Query: 531 PSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVV 590 + L ++ + + + + W + Sbjct: 512 IYITTLPIILLAIGFFVDLYIYGFEKWKTWDISKTW--------------------YYKL 551 Query: 591 FSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSG 650 F + + L A + + + + S T + LQSG Sbjct: 552 VKNKFYIDVLYTRIISERVILPLSAAFSGFENAY--NGSVNKLGSDTVSTGTYFRRLQSG 609 Query: 651 DFRLYCLY 658 F Y Sbjct: 610 VFENYVAV 617 >UniRef50_Q7NHD8 NADH dehydrogenase subunit 5 n=1 Tax=Gloeobacter violaceus RepID=Q7NHD8_GLOVI Length = 605 Score = 341 bits (875), Expect = 6e-92, Method: Composition-based stats. Identities = 158/684 (23%), Positives = 269/684 (39%), Gaps = 94/684 (13%) Query: 1 MDALQLLTWSLILY-LFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISG------ITQ 53 M++L W + LY L +L SL +++ L + ++ + Sbjct: 1 MESLVQFGWLIPLYCLAGALFSLPWALTQSKGQRIAAFGGLFFTGLALLHASLMLPEVLA 60 Query: 54 LHAGVTLVARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAA 113 G +++ ++ L+A +++++ + ++ LYSL YM A Sbjct: 61 GAGGTFRFPWIDFGTLNIEVSGLINPLTAGTLVLVAGVSLLVQLYSLGYMDHEP--RLAR 118 Query: 114 MGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLY-FFIAH 172 ++ F +M+ L++ DN +E+M LSS+ LV K + A F Sbjct: 119 YYGLLSFFTMAMLGLVLSDNLLAMYGFWELMGLSSYLLVGFWWSKPAAAAAAKKAFLTTR 178 Query: 173 AGSVLIMIAFLLMGRESGSLDFASFRTLS----LSPGLASAVFLLAFFGFGAKAGMMPLH 228 G L++I LL+ +G+L+ + + ++ LA+ + LL F G K+ PLH Sbjct: 179 VGDFLLLIGILLLYVNAGTLEITALGEWAETATIAAPLATLIVLLLFAGPVGKSAQFPLH 238 Query: 229 SWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISA 287 WLP A P+ ASAL + MV G+F + ++ L ++V GAI+A Sbjct: 239 VWLPDAM-EGPTPASALIHAATMVAAGVFMVARLEPVF----ALSSTALMVVAYTGAITA 293 Query: 288 LLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLN 347 L L A A+ DIKR+LA+ST+ +G + +A+GV A+FHL Sbjct: 294 LGSALMATAQNDIKRVLAYSTISQLGYMFMALGVGNT--------------EAAMFHLFT 339 Query: 348 HALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISE 407 HA FK +LFLGAG++I HT DM +MG L RMP TA IG LA++ + P GF S+ Sbjct: 340 HAFFKAMLFLGAGSVIHGAHTQDMREMGGLMGRMPVTAFTYGIGVLALAGVFPFAGFWSK 399 Query: 408 WYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEA 467 +L M +T GL + Y + F G P S + A Sbjct: 400 DAILHALEKAELYP----------VFAMGLLTAGLTAFYMARQYILVFLGKP-SEKSSRA 448 Query: 468 QEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHT 527 E TM + +++LA L F Sbjct: 449 HESTWTMSLPLVILAVPSAAAG-----------------------------WLGNEWFLK 479 Query: 528 QVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPL 587 + + LL+L + + L + A P+ Sbjct: 480 EELDTTLLVLSSGVVTVGFAVALAVYVFNLVPKSVVQALV------------------PV 521 Query: 588 RVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHL 647 R + T GLA + + + ++ + + T + +++L Sbjct: 522 RAALENRLYIDDFYSRTF--GNGLAGIAVVVAWLDRNVVDGIVNLVSAVTLLSGESLKYL 579 Query: 648 QSGDFRLYCLYVVAALVVLLIAIA 671 ++G +LY L + +++ L + + Sbjct: 580 ETGKAQLYLLVIFVSVIALGVMVG 603 >UniRef50_C9N684 Proton-translocating NADH-quinone oxidoreductase, chain L n=17 Tax=Streptomyces RepID=C9N684_9ACTO Length = 666 Score = 341 bits (874), Expect = 7e-92, Method: Composition-based stats. Identities = 138/683 (20%), Positives = 254/683 (37%), Gaps = 36/683 (5%) Query: 1 MDALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTL 60 M L +L + A L L ++ + + + + ++ G + Sbjct: 1 MTTTTLAVLVPLLPFLGAAAGLLLGRTAPGFVRPLAVLPTLAAAVLAVLVASRQGGGRPI 60 Query: 61 VARF---APPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFF 117 A DL L +D + + +++ L+ +YS Y+++ + Sbjct: 61 DAATQLTPTGSVPIDLALHLDGFAVLVAVLVGLVATCVQVYSTAYLKDD--ARYPSYAAL 118 Query: 118 MNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIA-RQDKTSINAGMLYFFIAHAGSV 176 +++F ++M+ ++ + +V +E+M + S+FLV + + A + F + G V Sbjct: 119 VSLFTSAMLLVVYSGDLMVLLVGWEIMGICSYFLVGHYWETPEARAASLKAFLVTKLGDV 178 Query: 177 LIMIAFLLMGRESGSLDFASFRTLSLSPGL--ASAVFLLAFFGFGAKAGMMPLHSWLPRA 234 +I + ++G+ + GL + + LL G K+ PLH+WLP A Sbjct: 179 PFLIGLFALAADTGTFRITGILAAVNNGGLDHPTLIALLLLAGVAGKSAQFPLHTWLPDA 238 Query: 235 HPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLY 293 A P+ SAL + MV GI+ + + LL +++ + A++ + L Sbjct: 239 M-AGPTPVSALIHAATMVAAGIYFVAR----LLPVFAASAAALVVLAVMAAVTMIGSGLA 293 Query: 294 ALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKG 353 ALA+ DIKR+LA+ST+ +G + A+ V G A+FHLL+H FK Sbjct: 294 ALAQDDIKRVLAYSTIGQLGYMSGALAVGDRG--------------AAVFHLLSHGAFKA 339 Query: 354 LLFLGAGAIISRLHTHD---MEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYT 410 +LFL AG +I T+ M +M L KR+P + LA++AIPP GF S+ Sbjct: 340 VLFLSAGVVIHAAGTNSLAAMSRMSGLTKRIPDAFWTMTVALLALAAIPPFAGFFSKEAV 399 Query: 411 WQSLFS-LSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQE 469 + VA AG + +V L +++ + F G R A + Sbjct: 400 LVAAEHTAFGDRDVAPAAAGWLVLVAGLTAAVLTAAYATRLWLLAFRG--RGPEAADHGR 457 Query: 470 VPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQV 529 P M + +LA + L L + + T + + Sbjct: 458 QPAAMTSVLWVLAVPTIAFGLLTGVLVDWFDGHSLTPSLTTAVLSTGVGLVGGLVTYGAW 517 Query: 530 TPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRV 589 + + + A + A + G ++ PL Sbjct: 518 RHTTAHAERPPVGAVAAHPDAEPALVEAEAITSHTAAYGTIAGAPDPSDPGRLLLGPLHR 577 Query: 590 VFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQS 649 F L A + + + +R + L ++ Q+ Sbjct: 578 HAVTGFHLDALYTALFVRP--TAAAAQLVRFLDREVVDTYVRGSGGIARGLGTLVRRAQT 635 Query: 650 GDFRLYCLYVVAALVVLLIAIAV 672 G+ + Y ++A +VL IA V Sbjct: 636 GNVQTYLGALLAGSLVLAIAAVV 658 >UniRef50_A8A9X6 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Ignicoccus hospitalis KIN4/I RepID=A8A9X6_IGNH4 Length = 692 Score = 341 bits (874), Expect = 7e-92, Method: Composition-based stats. Identities = 136/709 (19%), Positives = 262/709 (36%), Gaps = 72/709 (10%) Query: 2 DALQLLTWSLILYLFASLASLFLLGLDRL-------------AIKLSGITSLVGGVIGII 48 + + L L S+ L + + S + G V+ Sbjct: 11 SLALVAPVPIALPLVISIIVLLSPLYKKKIKFKPLWAGDREDWWEWSLAVATAGVVVLAT 70 Query: 49 SGITQLHAGVTLVARFAPPFE----FADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMR 104 + + G + ++ + D +L +D++S M +V++ + + +YS YM Sbjct: 71 AYLLAEGYGKSYEIKYYSWYPLPSHPNDFSLLIDTISGIMAIVVATITFLDLVYSWEYMA 130 Query: 105 EYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQ-----DKT 159 +G M +F+ASM +++ N ++ +E++ +S+ L+ Sbjct: 131 G--ARGPNRYYSEMMLFLASMEGIVLSGNLVLIMLFWELVGAASFLLISYYWYDPIIGPN 188 Query: 160 SINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRTLS-------LSPGLASAVFL 212 ++ AG + + + + +G+ + + L +A+ + Sbjct: 189 AVRAGRKAILVTRVADLFFLAGLGALIALAGTGNVLELQHYETLAFQKWLGAAALTAILV 248 Query: 213 LAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLP 272 G K+ +P WL A + ++ L S MV G + I ++ Sbjct: 249 GITIGAFGKSAQVPFWPWLSDAMEGPTTVSAVLHSATMVAAGAYLIARLFPLYEEFIAFN 308 Query: 273 LWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPL 332 L + +GA++AL+ L+ A +DIK+++A+ST+ +G + A+G+ Sbjct: 309 LALMDFIAIVGAVTALVAGLFGAAARDIKKVIAFSTMSQLGYMFAALGLG---------- 358 Query: 333 LTVVGLLGALFHLLNHALFKGLLFLGAGAIISR--------LHTHDMEKMGALAKRMPWT 384 L+ HL HA FK LLFLGAGA+I DM MG L + M T Sbjct: 359 ----SLVAGAAHLYIHAFFKALLFLGAGAVIHSLEHVLHHPYKARDMFNMGGLWRYMKVT 414 Query: 385 AAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAV 444 LI L++ +PP +G+ S+ +S A+A V L + GL Sbjct: 415 FVVTLIALLSLIGLPPFSGWWSKELIIESALHSPVPHALA-------VGVTLTLAAGLTG 467 Query: 445 MCFVKMYGITFCGAPR-STHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIA 503 ++ +TF G PR H E + M A++ LA + ++ + ++ K + Sbjct: 468 FYSGRLLYLTFFGKPRWKAHGEHLHDAGPAMKFALVTLALIVLVSGPTITFALKKALRAH 527 Query: 504 HAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTG 563 + + L F T +T +L+ + ++ +++ + Sbjct: 528 EGLPRYELPLGNAALTLAIIGFLTPITYYVLMGVAERGGIIRKVWYPLYKEFWFHEFFHS 587 Query: 564 DAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEP 623 A Y A+ L + + R + + E Sbjct: 588 VANFWAYALSKAVDAVERAYTAFLVGMAFFIGRAYAW-----------GWAVSVRLADED 636 Query: 624 FWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLIAIAV 672 +WD +VI + + +L K+ LQ+GD LY A L +L+ + Sbjct: 637 YWDVKVIDGLARSVVKLGKKALELQNGDINLYVALSAAGLTLLMFVTLI 685 >UniRef50_Q608Y7 NADH dehydrogenase I, L subunit n=2 Tax=Gammaproteobacteria RepID=Q608Y7_METCA Length = 613 Score = 340 bits (873), Expect = 1e-91, Method: Composition-based stats. Identities = 150/684 (21%), Positives = 249/684 (36%), Gaps = 92/684 (13%) Query: 3 ALQLLTWSLILYLFASLASLFLLGLDRLAI--KLSGITSLVGGVIGIISGITQLHAGV-- 58 L+LL L L L G A + + + + L Sbjct: 1 MLKLLCLVPFLPLTGFLILTCSEGRLPRAYVPWIGAGSVGLSAALATSLAFELLTLEPEA 60 Query: 59 -----TLVARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAA 113 TL A D +D+LS M+LV++ + + +YS YM + G A Sbjct: 61 RVFRQTLWHWMAAGDFGVDFAFYLDALSLNMLLVVTGIGFLIHVYSAGYMADDPG--MAR 118 Query: 114 MGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDK-TSINAGMLYFFIAH 172 +MN+F+ +M+ L++ DN + +E + L S+ L+ +K + A F + Sbjct: 119 FFAYMNLFVFAMLILVLADNLPLLYLGWEGVGLCSYLLIGFWYEKPENGYAARKAFVVTR 178 Query: 173 AGSVLIMIAFLLMGRESGSLDFASF-----RTLSLSPGLASAVFLLAFFGFGAKAGMMPL 227 G + + L+ + G+LD LA+A LL G K+ +PL Sbjct: 179 VGDTAMALGLFLLFSQLGTLDIQEAMSRAGAQWPAGSTLATAAALLLLGGAVGKSAQLPL 238 Query: 228 HSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAIS 286 WLP A A P+ SAL + MV G++ I + L LV IGAI+ Sbjct: 239 QVWLPDAM-AGPTPISALIHAATMVTAGVYLIARTHALF----TLAPEVQTLVAVIGAIT 293 Query: 287 ALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLL 346 L+ AL + DIKR+LA+ST+ +G + LA+GV A+FHL Sbjct: 294 LLISGFSALTQTDIKRVLAYSTISQIGYMFLALGVG--------------AWSAAIFHLT 339 Query: 347 NHALFKGLLFLGAGAIISRL-HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFI 405 HA FK LLFLGAGA+I L H D+ +MG L + +P L G A+ +P +G+ Sbjct: 340 THAFFKALLFLGAGAVILSLHHEQDIFRMGGLRRSLPLVFWTFLAGLAALVGLPFTSGYY 399 Query: 406 SEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAE 465 S+ + + AG L + ++ I F G R+ Sbjct: 400 SKHEILLTAYGAGS--------AGSWLWAAGTAGAVLTGLYSTRLLLIAFFGPERTPAHR 451 Query: 466 EAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTF 525 + + +++LA L + L+ L P + P + + + Sbjct: 452 HY---GSNIAAPLVVLAILSLAGGLAKLPLFPALPETGTDQAGDSPGLLTTAAPFLGVAI 508 Query: 526 HTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQ 585 V + + L + Sbjct: 509 GYLVYRTGTASAEALLKLPG--------------------------------------SE 530 Query: 586 PLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQ 645 LR ++ + + + D L + A + + R IV+ T+ + + Sbjct: 531 ALRRLWFSGWGMDWLYDRLFVLPFVVLARLNEADAIDQP-----YRGIVALTRLGHRLLV 585 Query: 646 HLQSGDFRLYCLYVVAALVVLLIA 669 Q+G R Y ++ V++L Sbjct: 586 PTQTGQLRRYAAGMLFGAVLILAV 609 >UniRef50_B5EKJ3 NADH dehydrogenase (Quinone) n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5EKJ3_ACIF5 Length = 660 Score = 340 bits (872), Expect = 1e-91, Method: Composition-based stats. Identities = 222/673 (32%), Positives = 340/673 (50%), Gaps = 22/673 (3%) Query: 3 ALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVA 62 L L T +L+L+L L L G A +L S ++ ++G + L A + Sbjct: 6 PLDLATGALLLWLGLGLLGFLLGGWPTTACRLIFPLSSAVALLLAVTGFSALTAPPDQL- 64 Query: 63 RFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFI 122 + P + ++D LS F ++++ LL +L++ Y R G + + F+ Sbjct: 65 QLRGPLPALPWSFQIDPLSGFFLILLGLLAFAVTLFATGYFRALSGPALRRLMLQYHTFL 124 Query: 123 ASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKT-SINAGMLYFFIAHAGSVLIMIA 181 M +L+ NAF F+V +E+M+L+S+FLV+ ++ S +AG LY IAH G++ I++ Sbjct: 125 LGMGLVLLAANAFTFLVAWEIMALASYFLVVTEHEEPGSRHAGFLYLLIAHLGALAILLG 184 Query: 182 FLLMGRES--GSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAP 239 F+L+ + F++ L P ASA FLL FFGF AKAG++PLH WLP AHPAAP Sbjct: 185 FVLLAGAAIAQGGPFSAMLHAPLDPFWASAAFLLTFFGFSAKAGLLPLHIWLPDAHPAAP 244 Query: 240 SHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQD 299 + SALMSG M+++ +G+L+V L L WWG V+ +G +AL GVL+A A+ D Sbjct: 245 APVSALMSGAMLQMAFYGMLRVDFLFLGN--LASWWGPFVLGVGLATALFGVLFAAAQTD 302 Query: 300 IKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGA 359 +KRLLA+S++EN+G+I++A G+A++ + L + L AL+H LNHA FKGLLFLG+ Sbjct: 303 MKRLLAYSSIENMGLIMVAFGLALIFRTHGLGALAALALAAALYHALNHAFFKGLLFLGS 362 Query: 360 GAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSR 419 G+++ + M+++G L ++MP TA L+G LAI+ +PPLNGF+SEW Q+ Sbjct: 363 GSVLHGAGSVAMDRLGGLIRQMPQTAFFMLLGTLAIAGLPPLNGFVSEWLLLQAFLLSPA 422 Query: 420 VEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAML 479 + L P+A + + LA VK YGI F G R A A E AM Sbjct: 423 LPQSTLSAVLPLAASGVVLAVALAAYAMVKFYGIAFLGQARG--AGHAHEGGRWERSAMA 480 Query: 480 LLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLL 539 LL+ C+ + L L + + TV G+ L P + ++ L + Sbjct: 481 LLSVACIFLGLFPGVLLNLLHPVLQEMLGQ-SFTVQRGLWLTPVSAQRASYSPIIFFLGM 539 Query: 540 AMPLLPGLYWLWCRSRRAAFRRTGDAWACGYG-WENAMAPSGNGVMQPLRVVFSALFRLR 598 A L G +W R R AWACG+ AM S G QPL +F+ L++ Sbjct: 540 ATALGLGFLLIWSFFGR--PLRRVPAWACGFPVRTPAMQDSSLGFAQPLLRIFAPLYQAE 597 Query: 599 QQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLY 658 +++D +P+ L+ ++ LQ G LY LY Sbjct: 598 REVD----------GAGRWRMRIGEPLYRGFYQPLSLLAFWLSAQVLRLQQGRITLYLLY 647 Query: 659 VVAALVVLLIAIA 671 L++LL Sbjct: 648 SFLTLLILLAVWR 660 >UniRef50_C5C4D6 NADH dehydrogenase (Quinone) n=2 Tax=Micrococcineae RepID=C5C4D6_BEUC1 Length = 999 Score = 338 bits (868), Expect = 3e-91, Method: Composition-based stats. Identities = 119/643 (18%), Positives = 230/643 (35%), Gaps = 35/643 (5%) Query: 6 LLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFA 65 +L + A + + + R + + L V + + +V Sbjct: 1 MLQLLTVHLAVALVGPVLVRLWGRRMFAVLALAPLSATVWALAQTPAVMAGDAPVVTTSW 60 Query: 66 PPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASM 125 P DL+ R+D L FMVL++ + + LY Y F +M Sbjct: 61 VPALGIDLSFRLDVLGWFMVLIVGGVGALVLLYCAWYFAS-GASNLPRFAGVFVAFAGAM 119 Query: 126 VALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKT-SINAGMLYFFIAHAGSVLIMIAFLL 184 + L+ DN F +E+ ++ S+ L+ D+ S A M + G ++++ ++ Sbjct: 120 LGLVTTDNTFALYAFWELTTVFSYLLIGHYFDRKVSRRAAMQAIIVTTFGGLVMLAGLVM 179 Query: 185 MGRE-SGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHAS 243 +G GS + L + G +K+ ++P H WLP A AAP+ S Sbjct: 180 LGELPGGSYSLTELVASAPESPLLPIAIVCVLVGAVSKSALVPFHFWLPSAM-AAPTPVS 238 Query: 244 A-LMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKR 302 A L + MVK G++ + + L W ++ + + + +LG AL + D+K Sbjct: 239 AYLHAAAMVKAGVYLVAR----LAPGYSTLPAWQWTLLVLASATMILGGYRALRQHDLKL 294 Query: 303 LLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAI 362 LLA+ TV +G ++L VG ++L L HA+FK LFL G + Sbjct: 295 LLAYGTVSQLGFLILLVGQPSRAVALAGLALLGA-----------HAMFKAALFLSVGIV 343 Query: 363 ISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEA 422 + T D+ ++ L + P+ A + ++ +PP G++++ + + Sbjct: 344 DAAAGTRDLRQLSGLVRTQPFLAVVAGLATASMIGLPPFAGYVAKEAALEGFVHDGDPTS 403 Query: 423 VALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLA 482 + + ++ + L V ++ + F E +E M A +LA Sbjct: 404 -------IMLLAVVVLGSILTVAYGLRFWWGAFGIKKDLADTEVDREA-WPMFAAPTVLA 455 Query: 483 ALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMP 542 + L + + A + P + + G F V +L + +L A+ Sbjct: 456 VAGLAAGLVPALGERLLEPFADTYPTGDPGHLT-----LWGGFGWPVVLTLAVFVLGALL 510 Query: 543 LLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQ--PLRVVFSALFRLRQQ 600 + + R A+ + + Q L + S + Sbjct: 511 FVARTRVEAAQGRVELVLDADVAYRQTMRRLDRASAYITSFTQRGSLPMYLSIILLTGVV 570 Query: 601 LDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKE 643 + L+ G R T VI + + ++ Sbjct: 571 VGGWAALSSGRTPGPVRPWDTPVQLVVGVIVILGAILAARSRR 613 >UniRef50_Q895D8 Sodium/proton antiporter shaA n=1 Tax=Clostridium tetani RepID=Q895D8_CLOTE Length = 486 Score = 338 bits (868), Expect = 4e-91, Method: Composition-based stats. Identities = 117/505 (23%), Positives = 229/505 (45%), Gaps = 30/505 (5%) Query: 10 SLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAPPFE 69 +++ + + +G R + + + + I T E Sbjct: 5 IVLIPILFPMVIAIFIGFGRFRENIRNSIVAITVFLNLFFIIYIFKNKGTAFFTVVKINE 64 Query: 70 FADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALL 129 F D+ L++D L F L++S+L + S YS+ YM+ + F + + + + Sbjct: 65 FLDIYLKIDKLGVFFSLLVSILWIFTSFYSMEYMKHEGKEN--RFFAFFLVTLGVTLGIS 122 Query: 130 VMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRES 189 N + +E+++L+++ LVI + ++ +G Y + G+ +++ + + + Sbjct: 123 FSGNLVTLYLFYEVLTLATFPLVIHSGSREALKSGRKYLIYSFVGATFVLLGMIFLFAVT 182 Query: 190 GSLDFAS---FRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALM 246 LDF R L+ L S +++ F GFG KA ++P HSWLP+A A +S L Sbjct: 183 KGLDFYPKGIIRDFKLNKTLISTSYIVMFLGFGVKAALVPFHSWLPKAMVAPTPVSSLLH 242 Query: 247 SGVMVKIGIFGILKVAMDLLAQTGLPLWWG-ILVMAIGAISALLGVLYALAEQDIKRLLA 305 + +VK G+F ++++ + + L +G ++ IS L+G AL + ++K+ LA Sbjct: 243 AVAVVKSGVFALIRITYYVFGGEIVKLIYGRKYLLLFVTISILMGSFLALHQSNLKKRLA 302 Query: 306 WSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISR 365 +ST+ +G ILL + +L L+G L HL+NHA+ K LF G I+ Sbjct: 303 YSTISQLGYILLGI-----------LILNGNSLVGGLLHLINHAVIKITLFFCVGTIMYT 351 Query: 366 LHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVAL 425 D++++ + K MP+T I +++ IPP NGF+S+WY Q +V Sbjct: 352 RGKTDIDEIKGIGKEMPYTMWCFTISSISLIGIPPTNGFVSKWYLAQGGLLEGKV----- 406 Query: 426 QLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAP---RSTHAEEAQEVPNTMIVAMLLLA 482 I +L ++ L M + + + F ++ E +E P M+V ++L+ Sbjct: 407 -----IFPAILLISALLTAMYLLPIITVAFFKKDEQHKNVEKIEIKEAPKNMLVPIILIT 461 Query: 483 ALCVLIALSASWLAPKIMHIAHAFT 507 + +++ L + + ++ I+ Sbjct: 462 CITIVLGLYPNPVLNFLLEISKEVI 486 >UniRef50_P50365 NADH-ubiquinone oxidoreductase chain 5 n=2 Tax=Allomyces RepID=NU5M_ALLMA Length = 641 Score = 338 bits (867), Expect = 5e-91, Method: Composition-based stats. Identities = 130/665 (19%), Positives = 234/665 (35%), Gaps = 54/665 (8%) Query: 4 LQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVAR 63 L ++T L +L + L I I + I L+ + Sbjct: 3 LTIITLPLFAFLTVGVIGRKLGVRGSQIITSLSIIISAILSLYGFYEIVLLNNLGPITIY 62 Query: 64 FAPPFEFAD----LTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMN 119 +P DS+S M +V+S + + LYS+ YM+ +++ Sbjct: 63 LSPWMNVIGAHADWAFYFDSISITMCVVVSSISSLVHLYSIGYMQGDPH--IQRFFSYLS 120 Query: 120 IFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDK-TSINAGMLYFFIAHAGSVLI 178 +F M+ L+ +N V +E + +SS+ L+ + + A M + G + Sbjct: 121 LFTFFMLLLVTGNNYLLMFVGWEGIGVSSYLLINFWFTRIQANKASMQAMLVNRVGDLGF 180 Query: 179 MIAFLLMGRESGSLDFASFR--TLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHP 236 ++ + GS D+ + L + V L K+ + LH+WLP A Sbjct: 181 VLGLFGIFWLFGSSDYDTVGIIAYKLDEQYITIVTLFLLIAAIGKSAQLGLHTWLPSAM- 239 Query: 237 AAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYAL 295 P+ SAL + +V G++ IL+ + L I V IG+++A+ L Sbjct: 240 EGPTPVSALIHAATLVTAGVYLILRSSPLF----ELAPTSLICVCVIGSLTAIFAATTGL 295 Query: 296 AEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLL 355 + D+KR++A+ST +G ++ A+G++ + A FHL NHA FK LL Sbjct: 296 FQNDLKRVIAYSTCSQLGYMVFALGLSQYEV--------------AFFHLFNHAYFKALL 341 Query: 356 FLGAGAIISRLH-THDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSL 414 FL AG+II LH DM KMG L +P+T LIG L++ A+P L G+ S+ + Sbjct: 342 FLSAGSIIHALHDEQDMRKMGGLVNILPFTYTMILIGSLSLMALPFLTGYYSKDAILEVA 401 Query: 415 FSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTH--AEEAQEVPN 472 + + G + +T + K + F G P + E P Sbjct: 402 YGQ-------FLVTGTFTYWLGTITATITAFYSSKALILGFFGTPNGSKKIYNTIHEAPL 454 Query: 473 TMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPS 532 M + + LL+ + I + + I + V + G ++ S Sbjct: 455 IMSIPLFLLSICSIFIGYITN---KHLSVIGIGSSGIISGGVGTLRDHYLGFDIEFISTS 511 Query: 533 LLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFS 592 + L G+ + + R + S Sbjct: 512 FGVQFYPLFASLLGISLALIVLKDPKKM-----------HSIEKPEGLLNTVNITRWLSS 560 Query: 593 ALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQ-HLQSGD 651 + + L + F + + +++ + +G Sbjct: 561 KSYWFDNVYNTVLISGSLHFGGIFARDIDKGFLSLLGPQGLQQLLITISRFFAIKIDTGF 620 Query: 652 FRLYC 656 Y Sbjct: 621 IPHYA 625 >UniRef50_Q6MDQ5 Putative NADH-ubiquinone oxidoreductase chain L n=2 Tax=Parachlamydiaceae RepID=Q6MDQ5_PARUW Length = 628 Score = 337 bits (866), Expect = 6e-91, Method: Composition-based stats. Identities = 149/687 (21%), Positives = 264/687 (38%), Gaps = 81/687 (11%) Query: 3 ALQLLTWSLILYLFASLASLFL--LGLDRLAIKLSGITSLVGGVIGIISGITQLHAG--- 57 Q++ L L L L + T L+ +I + +HAG Sbjct: 1 MWQMVGLGLFLPLIGFLILFTNSQRLSRSTTSFIGCSTILLAFLIFLGELYFYVHAGMNS 60 Query: 58 --VTLVARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMG 115 L + + +DSLS M L+I+ + + LYS+ YM + Sbjct: 61 QTFPLYQWLTLNGIQVNFSWHLDSLSLLMTLIITGVGFLIHLYSVGYMDHEKD--FTRYF 118 Query: 116 FFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKT-SINAGMLYFFIAHAG 174 +N FI +M+ L++ + + +E + L+S+ L+ K + A F + G Sbjct: 119 ACLNFFIFAMLLLVLAGDLLMLFIGWEGVGLASYLLIGFWYQKPSAAKAATKAFVVNRIG 178 Query: 175 SVLIMIAFLLMGRESGSLDFASFRTLS-----LSPGLASAVFLLAFFGFGAKAGMMPLHS 229 + ++ LL G+ D AS L+ + + + + LL F+G K+ +PL+ Sbjct: 179 DLGFLLGLLLTLHTFGTTDIASISQLAKQTFSIGAPIITVMTLLYFWGATGKSAQLPLYH 238 Query: 230 WLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISAL 288 WLP A P+ SAL + MV GI+ I++ L +V +G ++AL Sbjct: 239 WLPDAM-EGPTPVSALIHAATMVTAGIYLIVRTHTLF----DLSPLTLHVVGIVGGMTAL 293 Query: 289 LGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNH 348 L ALA+ D+KR+LA+STV +G++ LA G+ A+FHL H Sbjct: 294 FAGLCALAQTDLKRVLAYSTVSQLGLMFLACGIG--------------AYYAAMFHLTIH 339 Query: 349 ALFKGLLFLGAGAIISRL-HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISE 407 A K LLFL AG ++ + T +EKMG L+K T LIG L+++ + P GF S+ Sbjct: 340 AFVKALLFLSAGNVVHMMYDTTALEKMGGLSKIFTKTRWLFLIGALSLAGVFPFAGFFSK 399 Query: 408 WYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAE-- 465 + + + M V L + +++Y +TF G PRST E Sbjct: 400 DLILELGYLSGSH----------LLFSMGLVASLLTGVYMLRVYCLTFHGEPRSTQQELS 449 Query: 466 EAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTF 525 + QE P M++ + +L L ++ + + +++ ++ Sbjct: 450 QVQEAPAMMVIPVSILGLLSIVGGFLGFRFYST-PALINFLEEIGISSIEKNLSTGLHLS 508 Query: 526 HTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQ 585 T + L ++ + M + Sbjct: 509 ATGLIAMLGSIIGVIMTAFIYTRYYKSLGNSI---------------------------- 540 Query: 586 PLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQ 645 +F ++L +L +N + E + + Q+ A +Q Sbjct: 541 ----IFLKNSFYVEKLYRSLIVNPLRILASFIVGKVEAHAINGSLLLATNVVQKTAGLLQ 596 Query: 646 HLQSGDFRLYCLYVVAALVVLLIAIAV 672 Q+G R Y ++V +L++ + Sbjct: 597 KFQNGQVRSYIAWMVTGAGILIVYFII 623 >UniRef50_C4K6N0 NADH dehydrogenase I chain L, membrane subunit n=37 Tax=Gammaproteobacteria RepID=C4K6N0_HAMD5 Length = 633 Score = 336 bits (863), Expect = 1e-90, Method: Composition-based stats. Identities = 144/631 (22%), Positives = 239/631 (37%), Gaps = 88/631 (13%) Query: 58 VTLVARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMR---------EYEG 108 TL + + +TL +D LS M+ V+ + + LY+ YMR E Sbjct: 70 QTLWQWISTDYFHIPITLMLDGLSLTMLSVVIGVGFLIHLYASWYMRAKHSSHDEKEQAK 129 Query: 109 KGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQD-KTSINAGMLY 167 G A + N+FIASMV L++ DN + +E + L S+ L+ + A M Sbjct: 130 VGYARFFAYTNLFIASMVVLVLADNLLLMYLGWEGVGLCSYLLIGFYYTHPANGAAAMKA 189 Query: 168 FFIAHAGSVLIMIAFLLMGRESGSLDFASFR-----TLSLSPGLASAVFLLAFFGFGAKA 222 F I G V + + ++ ++ G+L+ L++ + L+ G K+ Sbjct: 190 FVITRIGDVFLALGLFILYQQLGTLNIRELMILAPTHLAVGSDAITWATLMLLGGAVGKS 249 Query: 223 GMMPLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMA 281 +PL +WL A A P+ SAL + MV G++ I + L + W G Sbjct: 250 AQLPLQTWLADAM-AGPTPVSALIHAATMVTAGVYLIARTHGLFLMAPEILHWAG----I 304 Query: 282 IGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGA 341 IGAI+ LL AL + DIKR+LA+ST+ +G + LA+GV A Sbjct: 305 IGAITLLLAGFAALVQTDIKRILAYSTMSQIGYMFLALGV--------------QAWDAA 350 Query: 342 LFHLLNHALFKGLLFLGAGAIISRLH-THDMEKMGALAKRMPWTAAACLIGCLAISAIPP 400 +FHL+ HA FK LLFL AG++I H ++ MG L K +P+ L+G A++A+P Sbjct: 351 IFHLMTHAFFKALLFLSAGSVILACHYEQNIFNMGGLRKPLPFLYLCFLVGGSALAALPV 410 Query: 401 -LNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAP 459 GF S+ + + +E M+ V L + +M I F GAP Sbjct: 411 ITAGFYSKDEILWGAWLHNNIE----------LMIAGLVGAFLTAVYTFRMILIVFHGAP 460 Query: 460 RSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIA 519 +A + V + +L L I A + +A Sbjct: 461 PEHPPYKAAPREISHHVPLWVLLILSTFIG----------------------ALIMPPLA 498 Query: 520 LVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPS 579 V H T +L + ++ G+ + +A+ + Sbjct: 499 GVLPENHALETGKTILAFCSGLIVITGILLASFLYSGDRHWAQRCQKTSIGTFLSALWFN 558 Query: 580 GNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQR 639 G + VF + + + LN + + Sbjct: 559 AWGFDRLYDRVFVKPYLWIARCLQSDPLNTSM-------------------NFLSLLCLW 599 Query: 640 LAKEIQHLQSGDFRLYCLYVVAALVVLLIAI 670 + ++G R Y + A V++L + Sbjct: 600 GNRLFSLSENGQIRWYLASMGAGAVLILTLL 630 >UniRef50_A5UV30 NADH dehydrogenase (Quinone) n=4 Tax=Bacteria RepID=A5UV30_ROSS1 Length = 793 Score = 336 bits (862), Expect = 2e-90, Method: Composition-based stats. Identities = 134/640 (20%), Positives = 257/640 (40%), Gaps = 35/640 (5%) Query: 7 LTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAP 66 + +++ ++A+ +L +I IS + + G L +A Sbjct: 1 MLTAVLSGFGGAIAAPWLHRFAPRHAGWLAALLPFALMIYFISLVPAVAGGDALRFSYAW 60 Query: 67 -PFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASM 125 P +L+ R+D LS L+I+ + + +Y+ Y+ M + IF+A+M Sbjct: 61 VPGLGVNLSFRIDGLSLLFALLITGIGTLVLIYAGGYLANDP--MLGRMLTLLLIFMAAM 118 Query: 126 VALLVMDNAFWFIVLFEMMSLSSWFLVIA-RQDKTSINAGMLYFFIAHAGSVLIMIAFLL 184 + ++ DN V +E+ ++SS+ L+ + + + A + + G + ++ +L Sbjct: 119 LGIVTSDNLIALFVFWELTTISSYMLIGYKHEYEKARKAALQSLLVTGIGGLALLAGIVL 178 Query: 185 MGRESGSLDFASF---RTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSH 241 +G+ +G+L+ + + + L + L FG K+ P H WLP A A Sbjct: 179 LGQIAGTLELSEMLKQGDVVRAHPLYGGILALVLFGAFTKSAQFPFHFWLPGAMEAPTPV 238 Query: 242 ASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIK 301 +S L S MVK G+F + ++ L W +L+ G + ++G A+ + D+K Sbjct: 239 SSYLHSATMVKAGVFLLARLNPVLGGTEA----WQLLLTFFGGATMIVGSFLAVQQTDLK 294 Query: 302 RLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGA 361 R+LA++TV +G ++L +GV T + A+ L HAL+KG LF AG+ Sbjct: 295 RILAYTTVSALGTLVLLIGVG-----------TDDAIKAAMVFTLGHALYKGALFQVAGS 343 Query: 362 IISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVE 421 + D+ ++G L MP TAAA ++ L+++ +PP+ GFI++ +++ S Sbjct: 344 VDHETGARDISQLGGLRTAMPITAAAAMLAALSMAGLPPMLGFIAKEVQYKANLSE---- 399 Query: 422 AVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLL 481 PI + + +T L V+ + F G P T + A E P +M + + L Sbjct: 400 --------PILIGVALLTNILTVVAAGFVSLRVFTGQPVHT-PKHAHEAPLSMWLGPVAL 450 Query: 482 AALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAM 541 A + L ++ + ++ A V + Q + LL + Sbjct: 451 ALGGLGAGLFSTQIGNFLIGPATGSVLGKVKAVELVLWAGIEGAAGQALALSGVTLLAGI 510 Query: 542 PLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQL 601 L + A A + + N M + L+ + + Sbjct: 511 GLYYARSIFPRIAAATAPLAALGAESWYHRSVNGMLLLAERQTRVLQNGYLRFYIGLIIT 570 Query: 602 DPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLA 641 + L + + D RV +V+ A Sbjct: 571 TTLILTGLMLLVGRVTITIPQNWTDVRVYELVVALIILSA 610 >UniRef50_D2ILR8 NADH-ubiquinone oxidoreductase chain 5 n=3 Tax=Ceractinomorpha RepID=D2ILR8_9METZ Length = 639 Score = 336 bits (862), Expect = 2e-90, Method: Composition-based stats. Identities = 118/675 (17%), Positives = 248/675 (36%), Gaps = 79/675 (11%) Query: 6 LLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFA 65 ++ + A LA L+ L + GG++ ++ + ++ G + Sbjct: 2 IMCILCFPLMGAILAGLWGRKLGSRGSGYWLALLVFGGLLVLLRVVWEIREGGAIYVELE 61 Query: 66 PP----FEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIF 121 F + +D ++ M+ +I ++ + LYS+ YM + ++++F Sbjct: 62 SWVKAGFVEINWGFYVDYITIAMMFIILVVSGLVHLYSIGYMEGDPH--VSRFMSYLSLF 119 Query: 122 IASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDK-TSINAGMLYFFIAHAGSVLIMI 180 M+ L+ N F + +E + L S+ L+ + + A + + G + ++I Sbjct: 120 TFFMLVLVTGHNYFQLFIGWEGVGLCSYLLINFWGTRLAANKAAIKAMLVNRVGDMGLII 179 Query: 181 AFLLMGRESGSLDFASFRTL-SLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAP 239 + + + +L++ L + + G K+ + LH+WLP A P Sbjct: 180 GMIFLLNQYDTLEYGLLSVLYEIGGSELEIIGFCLLVGAVGKSAQLGLHTWLPDAM-EGP 238 Query: 240 SHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQ 298 + SAL + MV G+F I++ A + + IL+ IG ++A L + Sbjct: 239 TPVSALIHAATMVTAGVFLIIRSADLFVHCS----VVLILMGVIGGLTAFFAGTVGLVQG 294 Query: 299 DIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLG 358 D+K+++A+ST +G+++LA G + AL+HL+NHA FK LLFL Sbjct: 295 DLKKVIAYSTCSQLGLMVLACGC--------------LCFSSALYHLVNHAFFKALLFLS 340 Query: 359 AGAIISRLH-THDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSL 417 AG++I L DM K G MP T L+G L++ +P L GF S+ + ++ Sbjct: 341 AGSLIHGLGDEQDMRKFGGFRGVMPITYVGILVGSLSLMGVPYLTGFYSKDVGLELVYGR 400 Query: 418 SRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRST--HAEEAQEVPNTMI 475 + + + L ++ + F G PR + E ++ Sbjct: 401 YMWG---------LVYWLGVGSVCLTGAYSGRLIYLVFFGRPRGSWLKYRGVSEGSWCIL 451 Query: 476 VAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLL 535 + +++L+ +++ S + + P + Sbjct: 452 IPLVILSIGSIIVGYGGKEFF------------------LSSEFVPVVPSLVKWLPLIFG 493 Query: 536 LLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALF 595 L ++W+ S W + + Sbjct: 494 FLGATGAGSIYVFWINMESNSGWGIWRLKFW---------------------YFFLNFAW 532 Query: 596 RLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLY 655 R ++ ++ + + + + I + L + I LQ G++ +Y Sbjct: 533 RFKEVMNRNVLERVLKFGYSLFKWVDSGVLEYFGPKGIGAIMVVLGQAISRLQGGEYTIY 592 Query: 656 CLYVVAALVVLLIAI 670 L + + ++ + + Sbjct: 593 ILIMFWYVGLVYVTV 607 >UniRef50_C9RJK6 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RJK6_FIBSS Length = 647 Score = 336 bits (862), Expect = 2e-90, Method: Composition-based stats. Identities = 147/699 (21%), Positives = 259/699 (37%), Gaps = 85/699 (12%) Query: 1 MDALQLLTWSLILYLFASLASLFLLGLDR-----LAIKLSGITSLVGGVIGIISGITQLH 55 + + + L+ + ++ G + L+ + + + + Sbjct: 2 ISLGLIPLFPLLGCIILGAIAIISSGSKKGPAEGFVGTLAVLFPALSFAGVALLSLNMPE 61 Query: 56 AGV--TLVARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAA 113 GV TL P D+ D LS M+L ++ + + +LYS+ YM + +G A Sbjct: 62 GGVRETLCNWIDIPMFRVDIGFLFDGLSRIMLLFVTGIGSLIALYSIGYM--HGDRGFAR 119 Query: 114 MGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDK-TSINAGMLYFFIAH 172 ++N+F+ SM+ L++ DN + +E + L S+ L+ + +A F + Sbjct: 120 YFAYINLFLFSMIVLVLSDNLLLTFLGWEGVGLCSYLLIGFWNKDIKNCHAANKAFIVNR 179 Query: 173 AGSVLIMIAFLLMGRESGS--LDFASFRT----------LSLSPGLASAVFLLAFFGFGA 220 G + ++ L + GS L++ + L + S +L F G Sbjct: 180 VGDIGFLLGMLCLVTIGGSAILNYDVLTNFISMVISGNHVDLVIPVLSIAGILFFIGCTG 239 Query: 221 KAGMMPLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILV 279 K+ +PL +WLP A A P+ SAL + MV G++ + ++ L ++ Sbjct: 240 KSAQIPLLTWLPDAM-AGPTPVSALIHAATMVTSGVYLLARLGSMF----ALLPVVLDII 294 Query: 280 MAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLL 339 + +G ++A + L + DIK++LA+ST+ +G + +A GV Sbjct: 295 VVVGMLTAFWAAVAGLFQNDIKKVLAYSTISQLGYMFMASGVC--------------AFD 340 Query: 340 GALFHLLNHALFKGLLFLGAGAIISRL-HTHDMEKMGALAKRMPWTAAACLIGCLAISAI 398 ++FH+ HA FK LFLGAGA+I L DM KMG L K+ P TA + LAI Sbjct: 341 ASIFHVFTHAFFKAALFLGAGAVIHALSGEQDMRKMGGLLKKTPVTACVMIFAFLAIVGF 400 Query: 399 PPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGA 458 P +GF S+ + +F G V+ +T + + ++ +TF G+ Sbjct: 401 PGFSGFWSKDLILEKIFMSGT--------MGQAVYVVGLITAVITAVYMGRLIILTFFGS 452 Query: 459 PRS--THAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVAS 516 R E E P M++ M++LA V +L + I P A+ Sbjct: 453 YRGSKESEEHIHEAPAVMLIPMVILAFGAVFAG----YLWADSIGIKFFAETLAPVVGAA 508 Query: 517 GIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAM 576 P L +A L + + + R + A G Sbjct: 509 QAYNTPAVVAHVNPVVFAALGTVAALLGMFIAYKIYANARIPAAKGSSAPEGGKA----- 563 Query: 577 APSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRP---I 633 L ++ G+ V A + D+ + I Sbjct: 564 --------------------TWTFLFDSIHKYVGIIPVNVLAWICDVVVDKILAAAQWTI 603 Query: 634 VSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLIAIAV 672 + L Q RL + LV LL + + Sbjct: 604 GAIATILGDGAASFQVRKVRLQIALSILGLVALLAIVIL 642 >UniRef50_B0SFU4 NADH dehydrogenase (Ubiquinone), M chain n=6 Tax=Leptospira RepID=B0SFU4_LEPBA Length = 579 Score = 336 bits (862), Expect = 2e-90, Method: Composition-based stats. Identities = 101/519 (19%), Positives = 209/519 (40%), Gaps = 36/519 (6%) Query: 3 ALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGV-IGIISGITQLHAGVTLV 61 Q+L+ + L + ++ + + + + + ++ + +G+ AG+ V Sbjct: 2 PDQILSIIIFLPIVSTFLIVIQKRVGAVVVISALSSAFTTILSLGLFFFYDASKAGLQFV 61 Query: 62 ARFAPPFEF----ADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFF 117 D + +D +S + + + + + S+ S + + K Sbjct: 62 HWIPDWILSGKLSVDYHVGLDGVSLLLFALTTFMFFLSSIASWSNI----PKKIKEFHIC 117 Query: 118 MNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVL 177 + + +++ + N F V +E+M L ++ + A + YF + AGS+ Sbjct: 118 LLVLETAVLGVFASGNLVLFYVFWELMVLPMVLMIGIWGGEERTKAALKYFLFSMAGSLF 177 Query: 178 IMIAFLLMGRESGSLDFASFRTLSL---SPGLASAVFLLAFFGFGAKAGMMPLHSWLPRA 234 ++ L + ++G S T SL S L +F F F K + P H+W+P Sbjct: 178 MLGGILTLYFKTGKTSIESLSTASLALYSEPLQWFLFFSFFLAFAIKIPLFPFHTWMPDV 237 Query: 235 HPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYA 294 H AP+ S ++GV++KIG +G ++ + + L G + + I + G + A Sbjct: 238 HTQAPTVGSVDLAGVLLKIGAYGFIRFCIPFFPEQSLLSQNG--IQILAVIGIVYGSMAA 295 Query: 295 LAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGL 354 L + DIKR++A+S++ ++G +L + T G++G + +++H + G+ Sbjct: 296 LVQTDIKRIIAYSSLSHLGFCILGIF-----------SFTTEGVVGGMLQMVSHGISTGM 344 Query: 355 LFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSL 414 +FL G I R HT ++ + G LA +MP + LI L+ +P NGF+ E+ Sbjct: 345 IFLMIGMIYERAHTRNISEFGGLAGQMPVFSTFFLIAVLSSIGLPGTNGFVGEFLILIGA 404 Query: 415 FSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTM 474 + + A L + + G ++ A+ +++ Sbjct: 405 IKSN-----------VWLGGIAATGVVLGALYLLWFVKRFLFGVSKTIQAKPYKDLSFRE 453 Query: 475 IVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPAT 513 I + L L I L + ++ F N+ Sbjct: 454 IGILSPLVVLIFWIGLYPKPFLSILNSSSNVFLNSASVV 492 >UniRef50_P50368 NADH-ubiquinone oxidoreductase chain 5 n=11 Tax=Eukaryota RepID=NU5M_SCHCO Length = 686 Score = 336 bits (862), Expect = 2e-90, Method: Composition-based stats. Identities = 132/696 (18%), Positives = 246/696 (35%), Gaps = 82/696 (11%) Query: 8 TWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGI-----------ISGITQLHA 56 L L + S FL + + + I G+ Sbjct: 3 LIILFLPFVGAFISGFLGRFVGTTGAQILTCACILTSALLSLYYWLSINELIIGLFSFEG 62 Query: 57 GVTLVARF---------------APPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLT 101 + + + ++ + + + + L+S+ Sbjct: 63 DQVYFTDWNFLSNNTFINLGTWVDSEYIKISWEFTFNEITLPFLFTVLFISFLIHLFSVN 122 Query: 102 YMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDK-TS 160 YM ++++F M L+ N F V +E + + S+ L+ + + Sbjct: 123 YMANDPH--IQRFFSYLSLFTFFMAILVTGANYFVLFVGWEGIGVVSYLLINFWFTRIQA 180 Query: 161 INAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRTLS--LSPGLASAVFLLAFFGF 218 A +L F G + + IA+ +M GS DF++ +L ++ + + L G Sbjct: 181 NKAAILAFNTNRIGDMALSIAYFVMLPAFGSADFSTVFSLPAYINQTTITIIGFLLLVGA 240 Query: 219 GAKAGMMPLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGI 277 AK+ +PLH+WLP + P+ SAL + +V G + +++ + L + Sbjct: 241 MAKSSQIPLHNWLPGSM-EGPTPVSALIHAATLVTAGSYLLIRSSPIL----EYAPTVLL 295 Query: 278 LVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVG 337 ++ IGA +A L + DIKR++A+ST+ +G +++A+G++ + Sbjct: 296 VITIIGASTAFFAATCGLVQNDIKRIIAFSTISQLGYMVMAIGLSQYNV----------- 344 Query: 338 LLGALFHLLNHALFKGLLFLGAGAIISRLHT-HDMEKMGALAKRMPWTAAACLIGCLAIS 396 AL H L HA FK LLFLGAG++I D+ KMG L +P+T A L+G L++ Sbjct: 345 ---ALAHTLFHAYFKALLFLGAGSVIHAFGDIQDVRKMGGLINFLPFTYAVMLVGTLSLL 401 Query: 397 AIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFC 456 A P L GF S+ + + A ++ +VT GL ++ + F Sbjct: 402 ATPFLTGFYSKDLIIELAYGQYSFSGTY-------AYILGSVTAGLTAFYSFRLISLVFL 454 Query: 457 GAPRSTHAE--EAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATV 514 P + E T+I+ + +LA + S + I F Sbjct: 455 TKPNGNKQNYLNSHEASITVIIPLAVLAIFSIFFGYVTS---DLFVGIGSDFFANTIFIH 511 Query: 515 ASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWEN 574 + I+LV F + LL + L LY Y Sbjct: 512 PNNISLVEAEFSMSLIFKLLPTIFSLAGTLFALYLY------------------NYNPHF 553 Query: 575 AMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIV 634 + N + + + + + + + + + + Sbjct: 554 IDSLVENNLGKKVYGFLNGKYYFDVIYNNYIISKGLQFGYNISKEIDRGVIELIGPYGMS 613 Query: 635 SATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLIAI 670 + + I L +G Y LY+ L+ LL + Sbjct: 614 NVLYSTSANIAKLDTGIITTYALYITLGLLSLLFIV 649 >UniRef50_Q1IS53 Proton-translocating NADH-quinone oxidoreductase, chain M n=16 Tax=Bacteria RepID=Q1IS53_ACIBL Length = 559 Score = 335 bits (860), Expect = 3e-90, Method: Composition-based stats. Identities = 114/530 (21%), Positives = 220/530 (41%), Gaps = 44/530 (8%) Query: 1 MDALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTL 60 M +L+ L L ++ L + ++ AI+ + + G + + I A + Sbjct: 1 MFRSHILSIVLFTPLAGAILLLMVPKENKNAIRWIANLAALAGFLVSLPLIPWFWAVKSE 60 Query: 61 VARF----------APPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKG 110 V + P A L +D +S ++++ +LL + L S T + Sbjct: 61 VTPYFKFAEGSTNNWIPSIGAGYQLGIDGISFLLIILTTLLGSISILSSWTAIE----NR 116 Query: 111 AAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFI 170 + + M+ + + ++ F F V +E M + + L+ + A + +F Sbjct: 117 VKEYYAWFLLLQTGMLGVFMANDFFLFFVFWEAMLVPMYLLIGIWGGPRKLYAAIKFFLY 176 Query: 171 AHAGSVLIMIAFLLMGRESGS------LDFASFRTLS--LSPGLASAVFLLAFFGFGAKA 222 AGSVL+++ L + + + + ++ A +F F GF K Sbjct: 177 TLAGSVLMLLGILFLYFHHHTVTGVYTFSLEALYATAPLITGKAAIFLFFAFFVGFAIKV 236 Query: 223 GMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAI 282 M P H+WLP AH AP+ S +++GV++K+G +G+++ ++ W L++ + Sbjct: 237 PMFPFHTWLPDAHVEAPTAGSVILAGVLLKMGTYGLIRFSLPFFPAVATIKWVQALLITL 296 Query: 283 GAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGAL 342 I L G L +L ++D+K+L+A+S+V ++G L + V T +G+ G++ Sbjct: 297 SLIGILYGALVSLVQKDMKKLVAYSSVSHLGFCTLGIFV-----------FTQMGIAGSV 345 Query: 343 FHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLN 402 +NH + G LFL G + R HT ++ + G ++ MP A LI ++ +P LN Sbjct: 346 IQQINHGISTGALFLIVGILYERRHTREISEYGGISTVMPVYATIALIMFMSSMGLPLLN 405 Query: 403 GFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRST 462 GF+ E + F +++ + LA + +Y F G + Sbjct: 406 GFVGEMPIMMATFMVNKTW-----------AIWAIPGVVLAAAYLLWLYQRVFFGTVTNP 454 Query: 463 HAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPA 512 E+ ++ + + L L + I L L + A T A Sbjct: 455 KNEKLADLTPRELATFVPLVILALAIGLYPQPLFKILDQPAAKLEATINA 504 >UniRef50_B0VE74 pH adaptation potassium efflux system transmembrane protein n=22 Tax=cellular organisms RepID=B0VE74_ACIBY Length = 949 Score = 335 bits (859), Expect = 4e-90, Method: Composition-based stats. Identities = 122/554 (22%), Positives = 237/554 (42%), Gaps = 32/554 (5%) Query: 1 MDALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTL 60 MD L L+ + + L R L I + +++ + G ++ Sbjct: 1 MDTSVLPIIILLPLILGTTLVSLLQRFSRGVTALGAIGVSLTSFGLLLTQAKTVLGGASI 60 Query: 61 VARFAP-PFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMN 119 + P +L+ R+D+L L+I+ + + + Y + + + Sbjct: 61 QQSWDWLPQLGINLSFRLDALGLLFSLLITGIGTLIYI--YAYYYLGPKNSLSKLYLLLM 118 Query: 120 IFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIAR-QDKTSINAGMLYFFIAHAGSVLI 178 +F+A+M+ + + +N +V +E+ S+SS+ LV + + + I G + + Sbjct: 119 LFMAAMLGISLSNNLIILLVFWELTSISSFLLVGYWSHYEAAQRGSRMALTITGMGGLAM 178 Query: 179 MIAFLLMGRESGSLDFASF---RTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAH 235 + F+L+G+ +G+ + + L S L LL G K+ P H WLP A Sbjct: 179 LGGFVLLGQITGTYEINDIVGMKDLIQSHYLFVPTLLLILLGAFTKSAQFPFHFWLPNAM 238 Query: 236 PAAPSHASA-LMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYA 294 AAP+ SA L S MVK GIF + ++A + + +V +G + + +A Sbjct: 239 -AAPTPVSAYLHSATMVKAGIFLLARLAPIFIGAA----LYHNIVTFVGLFTLCMAACFA 293 Query: 295 LAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGL 354 + ++D+K LLA+ST+ ++G+I+ +G+ + + + A+FH++NHA FK Sbjct: 294 IFKEDLKGLLAYSTISHLGLIVCLLGIG-----------SPLAVAAAIFHIINHATFKAA 342 Query: 355 LFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSL 414 LF+ AG I T D+ K+ + + +P+TA +I +++ +P NGFIS+ + L Sbjct: 343 LFMIAGIIDHETGTRDLRKLSGIWQLLPFTATLTMITAASMAGVPLTNGFISKEMFFTEL 402 Query: 415 FSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHA--EEAQEVPN 472 + A ++ + G AV +++ F P + A E P Sbjct: 403 LAS------LSGSTVIFASIIATLAGIFAVSYSIRLVHGVFFDGPVGKQVPNKNAHEPPI 456 Query: 473 TMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPS 532 M +LLA LC+L+ + + L +++ + P + +A+ G + Sbjct: 457 GMRAPAILLATLCILVGIFPALLVEPLVNSVTRASLMQPDFAGTHLAIWHGFNAPLIMSI 516 Query: 533 LLLLLLLAMPLLPG 546 + L+ Sbjct: 517 IALVGGTLFYFALA 530 >UniRef50_UPI0001B5496D NADH dehydrogenase I chain L n=1 Tax=Streptomyces sp. SPB78 RepID=UPI0001B5496D Length = 753 Score = 335 bits (859), Expect = 4e-90, Method: Composition-based stats. Identities = 138/695 (19%), Positives = 250/695 (35%), Gaps = 65/695 (9%) Query: 1 MDALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTL 60 M+ L +L +A L + ++ + + + + G T+ Sbjct: 1 MNTTTLAVLVPLLPFLGGIAGLLIGRGAAGLVRPLAVLPAAASAVLAVLVAVRQGGGATI 60 Query: 61 VARF---APPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFF 117 A DL L +D + + ++++++ LYS Y+RE ++ Sbjct: 61 DAATRLTPTGAAPVDLALHLDGFAVLVAVLVTVVSTCVQLYSTGYLREDP--RYSSYAAL 118 Query: 118 MNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIA-RQDKTSINAGMLYFFIAHAGSV 176 +++F ++M+ ++ + +V +E+M + S+FL+ + + +A + F + G V Sbjct: 119 VSLFTSAMLLVVYSGDLMVLLVGWEVMGICSYFLIGHYWETPEARSASLKAFLVTKLGDV 178 Query: 177 LIMIAFLLMGRESGSLDFASFRTLSLSPGL--ASAVFLLAFFGFGAKAGMMPLHSWLPRA 234 + + ++GS GL + + LL G K+ PLH+WLP A Sbjct: 179 PFLFGLFALAADTGSFRITEVLHAVTHGGLDHPTLIALLLLCGVVGKSAQFPLHTWLPDA 238 Query: 235 HPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLY 293 A P+ SAL + MV G++ + ++ + + +L + + L Sbjct: 239 M-AGPTPVSALIHAATMVAAGVYLVARLLPVFTSSAAALVVLAVLAAL----TMVGSGLA 293 Query: 294 ALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKG 353 ALA+ DIKR+LA+ST +G + A+ V G A+FHLL+H FK Sbjct: 294 ALAQDDIKRVLAYSTAGQLGYMTGALAVGDRG--------------AAVFHLLSHGAFKA 339 Query: 354 LLFLGAGAIISRLHTHD---MEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYT 410 LLFL AG +I T+ M +M L + +P + LA++AIPP GF S+ Sbjct: 340 LLFLAAGVVIHAAGTNSLAAMSRMPGLRRAVPDAYWTMTVALLALAAIPPFTGFFSKEAV 399 Query: 411 WQSLFSLSRVEA-VALQLAGPIAMVMLAVTGGLAVMCFVKMYGI---------------- 453 + A AG + +V T L +++ + Sbjct: 400 LGVAEHAATGHAHGIPTAAGWLVLVAGLATALLTGAYATRLWLLLGARETPEAAEAREAA 459 Query: 454 -----------TFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMH- 501 AP T A P M + LLA L L+A L Sbjct: 460 EASAASGVAREATASAPDGTPAHGHPGTPRVMNAVLWLLAIPTFLFGLTAWVLPDWFDGR 519 Query: 502 -IAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFR 560 +A T + T + + + + T +L L +A Sbjct: 520 DLAPTLTTSVLGTGVALVGGLLTYAAWRHTKALAARYPLGAVAADPEGDAGRTEAQAIAS 579 Query: 561 RTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQS 620 R A G + A G ++ L + F L + + Sbjct: 580 RPAAYGAPGGTEDPADP--GRLLLGGLHRHAATGFHLDRLHSALAVTPVRAGATLV--RF 635 Query: 621 TEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLY 655 + + +R + + L + Q+G+ + Y Sbjct: 636 LDTAVIDTYVRAAAALPKLLGAAARRAQTGNIQTY 670 >UniRef50_A9F578 NADH dehydrogenase I chain M n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9F578_SORC5 Length = 754 Score = 334 bits (858), Expect = 6e-90, Method: Composition-based stats. Identities = 129/562 (22%), Positives = 217/562 (38%), Gaps = 71/562 (12%) Query: 5 QLLTWSLILYLFASLASLF---LLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVT-- 59 +L+ L L +A L D ++L + + ++ Q G T Sbjct: 193 HILSILTFLPLLGVVAVFLAHLLRYRDDRKLRLMTVVLMGVNLVLAAWLYAQFDRGFTRA 252 Query: 60 --------LVARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGA 111 + + + +D +S MVL+ +L+ V +L S + Sbjct: 253 DGNDGYQFIEHGVWIRSLNVEYFVGVDGVSISMVLLTALISFVGALASYS-----VHDQL 307 Query: 112 AAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIA 171 N+ + M + + + F F V +E+M L +FL+ A + +F Sbjct: 308 KGYFAMYNLLVTGMFGVFIALDLFLFFVFWEVMLLPMYFLIGIWGGPRREYAAIKFFLYT 367 Query: 172 HAGSVLIMIAFLLMGRESGS------------LDFASFRTLS--------LSPGLASAVF 211 AGSV +++AF+ +G ++ L V+ Sbjct: 368 LAGSVFMLLAFIWFYLNAGHTYLVDGQATERIFSIPELSRVAWAAQGLTILGVAAVKVVW 427 Query: 212 LLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGL 271 + F GF K M P H+WLP AH AP+ S +++GV++K+G +GIL++ LL + Sbjct: 428 IWLFVGFAIKIPMFPFHTWLPDAHVEAPTAISVILAGVLLKMGTYGILRINFTLLPEA-- 485 Query: 272 PLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDP 331 W + G ++ L G A+A+ D+K+L+A+S+V ++G LLA+G Sbjct: 486 TQWAAPAMAVFGVVNILYGAFCAMAQSDLKKLVAYSSVSHMGFTLLALGA---------- 535 Query: 332 LLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIG 391 +T G+ L + NH L G+LF G + R+HT D+++ G LA MP A Sbjct: 536 -MTPQGIQACLVQMFNHGLITGMLFTLVGVVYDRVHTRDIDRFGGLASEMPLYTALVGFA 594 Query: 392 CLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMY 451 +A +P L+GF E T+ F R ++ AV L + Sbjct: 595 FMASLGLPGLSGFWGEAMTFIGAFPRYRA-----------LTILAAVGVILTAAYHLWAL 643 Query: 452 GITFCGAPR---------STHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHI 502 F G R + E+ + ++ LAAL +++ L I Sbjct: 644 QRMFLGTFRASWRQSKYLEPFGGKFPEISGRELASIAPLAALVLVLGFWPRPLLSLIDRG 703 Query: 503 AHAFTNTPPATVASGIALVPGT 524 A S IA PG Sbjct: 704 ALDVHRLVDRPGQSQIAGAPGA 725 >UniRef50_Q6UVP8 NADH-ubiquinone oxidoreductase chain 5 n=33 Tax=Eukaryota RepID=Q6UVP8_PSEAK Length = 689 Score = 334 bits (857), Expect = 6e-90, Method: Composition-based stats. Identities = 134/713 (18%), Positives = 257/713 (36%), Gaps = 97/713 (13%) Query: 4 LQLLTWSLILYLFASLA--SLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLV 61 L LL L ++ +L L G L++ S +++ I + + L Sbjct: 3 LTLLALPLSCFICLALFGRLLGTRGSALLSVFSSVCCTVISCFIFYEVALCACPCHIVLA 62 Query: 62 ARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIF 121 F A+ D+LSA M +V++L+ + ++S +YM E ++ +F Sbjct: 63 PFFHSELFDANWGFLFDTLSAVMCVVVTLVSCLVVIFSCSYMIEDPH--FIRFISYLKLF 120 Query: 122 IASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDK-TSINAGMLYFFIAHAGSVLIMI 180 +M+ L+ DN V +EM+ L+S+ L+ + S A + + G + + + Sbjct: 121 TVAMLILVTADNYIQLFVGWEMVGLASFLLISFWFTRLQSSKAAIQAMLLNRVGDMGLAL 180 Query: 181 AFLLMGRESGSLDFASFRTLSLSPG-----------LASAVFLLAFFGFGAKAGMMPLHS 229 + + + ++ +++ L +L F G K+G LH Sbjct: 181 GVICLFYMFKTTNYQVIFASAMNTSELLVLGPFTFNLLDVACILLFIGAMGKSGQFGLHV 240 Query: 230 WLPRAHPAAPSHASA-LMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISAL 288 WLP A AAP+ SA L + MV G+F + + + V +GAI+ + Sbjct: 241 WLPEAM-AAPTPVSALLHAATMVTAGVFLLARSSPLF----EYTPTAAAFVTIVGAITCI 295 Query: 289 LGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNH 348 L + D+KR++A+ST +G ++ G + + +FHL NH Sbjct: 296 FAGTIGLVQNDLKRIIAYSTCSQLGYMVTTCGASNYAV--------------GIFHLFNH 341 Query: 349 ALFKGLLFLGAGAIISR-LHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISE 407 A FK LLFL AGAII + D+ K G LA+ + ++ LIG LA+ P L GF S+ Sbjct: 342 AFFKALLFLSAGAIIHALANEQDIRKYGGLAQVLVFSYTLVLIGSLALIGTPFLTGFYSK 401 Query: 408 WYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITF---CGAPRST-- 462 + + + L+ + ++ + ++ F PR+T Sbjct: 402 DVILE-------LASARYALSVHFSYLLATFSVLTTSYYSFRLIFFCFSSCFSDPRTTGT 454 Query: 463 -----------------------HAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKI 499 + + A + M + +++LA + Sbjct: 455 KSHLATFEKDQVSLGKLPNLHRQNIKGAHDPDWVMSLPLIILALGSIYAGF---LFKEMF 511 Query: 500 MHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAF 559 + + F N L+ F Q L L L +A +L + ++ R Sbjct: 512 IGLGTDFWNNAIFVNPVNANLIEAEFLPQSIKLLPLFLTVAGAVLAFILNMYFVKRS--- 568 Query: 560 RRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQ 619 +G ++ L + + + L+ + Sbjct: 569 -----------------YLMASGSLKTLYTFLNRRWFYDKLLNDLIAYPTYYGGFNLIRV 611 Query: 620 STEPFWD--ERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLIAI 670 + + + + ++L ++ QSG Y + ++ + V + Sbjct: 612 FDKGLLELLPIAPLGLGNNLKKLYIQLGETQSGLIFHYAVIMILSSVCFFAVL 664 >UniRef50_P05510 NADH-ubiquinone oxidoreductase chain 5 n=1247 Tax=cellular organisms RepID=NU5M_NEUCR Length = 715 Score = 334 bits (856), Expect = 8e-90, Method: Composition-based stats. Identities = 125/715 (17%), Positives = 263/715 (36%), Gaps = 97/715 (13%) Query: 6 LLTWSLILYLFASLASLFLLGLDRLAIK--LSGITSLVGGVIGIISGITQLHAGVTLVAR 63 + +IL L S+ + F ++ ++ ++ ++ + I++ + + Sbjct: 1 MYLSIIILPLLGSIVAGFFGRKVGVSGAQLITCLSVIITTGLAILAFFEVGFNNIPVTIN 60 Query: 64 FAPPFE----FADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMN 119 + + DSL+ M++ + ++ + +YS++YM +++ Sbjct: 61 LFRWIDSEWYNILWGFQFDSLTVAMLIPVLIISSLVHIYSISYMSHDPHNQ--RFFSYLS 118 Query: 120 IFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDK-TSINAGMLYFFIAHAGSVLI 178 +F M+ L+ +N V +E + + S+ LV + + + M F G + Sbjct: 119 LFTFMMIILVTANNYLLMFVGWEGVGVCSYLLVSFWFTRIAANQSSMSAFLTNRVGDCFL 178 Query: 179 MIAFLLMGRESGSLDFASFRTLS--LSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHP 236 I ++ G+LD+A+ +L+ ++ +A+ + + G AK+ + LH WLP A Sbjct: 179 TIGMFVVLWTLGNLDYATVFSLAPYINSDIATIIGICLLIGAMAKSSQVGLHVWLPMAM- 237 Query: 237 AAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYAL 295 P+ SAL + MV G++ +++ + + +L + +GAI+ + L L Sbjct: 238 EGPTPVSALIHAATMVTAGVYLLMRSSPLI----EYSSTVLLLCLWLGAITTVFSSLIGL 293 Query: 296 AEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLL 355 +QDIK+++A+ST+ +G++++A+G++ + ALFHL+NHA +K LL Sbjct: 294 FQQDIKKVIAYSTMSQLGMMVIAIGLSSYNV--------------ALFHLINHAFYKALL 339 Query: 356 FLGAGAIISR-LHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSL 414 FLGAG++I D K G L +P T + LI L++ A P + GF S+ + +S Sbjct: 340 FLGAGSVIHAVADNQDFRKFGGLKNYLPLTYSVMLIASLSLVAFPYMTGFYSKDFILESA 399 Query: 415 FSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQ------ 468 + VA ++ + + VK+ +TF P Sbjct: 400 YGQFSFSGVA-------VYIIATIGAIFTTLYSVKVLYLTFLANPNGYIHFYRHFILYER 452 Query: 469 --------------------------------EVPNTMIVAMLLLAALCVLIALSASWLA 496 E + + +++LA + Sbjct: 453 LYVYVSYTGKEEFYLPKHMSKEINNLPRSVSGEGGFFLSLPLVILALFSIFFGFITK--- 509 Query: 497 PKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRR 556 + + F + ++ T P+L LL + L L + Sbjct: 510 DIFIGLGSNFFIDNSLFIHPIHEIMIDTEFA--VPTLFKLLPFIFTISFSLIALVLSEKY 567 Query: 557 AAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTA 616 GY L F+ F + + + Sbjct: 568 PNLVVHFKLSRLGYN---------------LFGFFNQRFLVELFYNKYITNLVLDLGGQI 612 Query: 617 RAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLIAIA 671 + + + + +K+I L + Y L+++ ++ + Sbjct: 613 TKILDKGSIELLGPFGLEKVLIKWSKDIASLSTSIVTNYALFILVGFILYVFTFI 667 >UniRef50_Q9UYN2 Hydrogenase 4, component B or formate hydrogen lyase, subunit 3 n=1 Tax=Pyrococcus abyssi RepID=Q9UYN2_PYRAB Length = 647 Score = 333 bits (854), Expect = 1e-89, Method: Composition-based stats. Identities = 154/625 (24%), Positives = 266/625 (42%), Gaps = 51/625 (8%) Query: 12 ILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAPPFEFA 71 + L GL + A K+S + + + + L Sbjct: 6 LALPLVLFILGMLGGLSKKAFKVSSAFAALASLSIVALVFNLKPVEGKL----------L 55 Query: 72 DLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVM 131 L + +D S +L++ +L SLYS+ YM + GK N F+ SM +L+ Sbjct: 56 GLPVYIDGFSLIFMLILGILGFSASLYSIPYMERHPGK-EWVYAVAYNAFLLSMFLILIT 114 Query: 132 DNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVL-IMIAFLLMGRESG 190 N WF+ +E+M+LSS+ L+ D+ + G+ Y+ H + + I+ + G Sbjct: 115 SNLVWFVFFWELMTLSSFILITW--DEKDFDPGIKYYIAMHILTTFPLFISLGVSYSFLG 172 Query: 191 SLD-FASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGV 249 SLD SL ++ F AK+G++P H W+P + APS+ S+L++G Sbjct: 173 SLDAMTYPNLKSLPSSATLLLYASFLIAFMAKSGIVPFHFWVPSTYKVAPSNISSLLAGA 232 Query: 250 MVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTV 309 M KI +FG++++ L P G LV +GA++ +G LYAL E D K+LLA+ ++ Sbjct: 233 MEKIAVFGLIRIMYTALPT---PKSIGYLVALLGAVTLTVGTLYALRESDAKKLLAYHSI 289 Query: 310 ENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTH 369 +G I L +G+ + D L +G+ +FH LNH+LFKG LFL AG++ Sbjct: 290 GQMGYIWLGIGIGLSL----DSPLGALGMFAGIFHALNHSLFKGSLFLSAGSVEYATGET 345 Query: 370 DMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAG 429 +++ +G LA+RM WT A L+ LAIS +PP NGF+S+W + + ++ + Sbjct: 346 NLDNLGGLAERMKWTGLATLLASLAISGVPPFNGFLSKWLIYTAGYNSGD-------MVL 398 Query: 430 PIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIA 489 V+ + + F+K Y F G S + EVP +M+V L+L++LC++I Sbjct: 399 SFGAVLAVFISAVTLASFIKFYTSQFGGE--SERYRDVSEVPLSMVVPQLILSSLCLIIG 456 Query: 490 LSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYW 549 + + + P I A +T +L T +P + LL++ + + Sbjct: 457 IFPALVVPLINEPIGAPIST---------SLYLNFDSTAFSPLIFGLLIVTLAFGTYIGL 507 Query: 550 LWCRSRRAAFRRTGDAWACGYGWENAMAP--SGNGVMQPLRVVFSALFRLRQQLDPTLRL 607 + W CG + + + Sbjct: 508 -------EPRGEEAEPWDCGASFIERDEYRVRAHHYYLKYEEKVGNFYAFGDW--AYSVG 558 Query: 608 NKGLAHVTARAQSTEPFWDERVIRP 632 + + ++ + V P Sbjct: 559 ASLVNAIVRFYVWIAKYFVKIVDTP 583 >UniRef50_A8ERK5 NADH-quinone oxidoreductase, L subunit n=1 Tax=Arcobacter butzleri RM4018 RepID=A8ERK5_ARCB4 Length = 628 Score = 333 bits (854), Expect = 1e-89, Method: Composition-based stats. Identities = 134/685 (19%), Positives = 258/685 (37%), Gaps = 85/685 (12%) Query: 7 LTWSLILYLFASLA--SLFLLGLDRLAIK------LSGITSLVGGVIGIISGITQLHAGV 58 L W ++ LF ++ SL+ + + I + IT L+ +I + + L + Sbjct: 6 LVWIILAPLFGAILNGSLYFYHIKKSKISENYFALIGTITPLISFLITLSLFLRMLEEKI 65 Query: 59 TLVARFAPPF----EFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAM 114 ++ D+LS FM + ++ + + +Y++ YM+ +G Sbjct: 66 IFKQHIFTWLNVDKLNIEMAFLGDNLSIFMSMFVTFVGWLIHIYAIGYMKGDDG--FGKF 123 Query: 115 GFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQD-KTSINAGMLYFFIAHA 173 + N+F+ASM+ L++ DN + +E + + S+ L+ K ++ A F + Sbjct: 124 FAYFNLFLASMLILVLADNPIILFIGWEGVGVCSYLLIKFYYGSKDNVIAANKAFIVNRV 183 Query: 174 GSVLIMIAFLLMGRESGSLDFA----SFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHS 229 G ++ + + G +D + + + L L F G K+ +PL+ Sbjct: 184 GDFGFLLGVVTLFFALGQVDLSFGTIEANIGNTTNSLLILSGFLLFVGAMGKSAQVPLYV 243 Query: 230 WLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISAL 288 WLP A A P+ SAL + MV G++ + + + GI + IGAISAL Sbjct: 244 WLPDAM-AGPTPISALIHAATMVTAGVYMVARFHFLYAGIEEI----GIFIAYIGAISAL 298 Query: 289 LGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNH 348 L + A + DIK++LA+ST+ +G + +AVG+ LFH+ H Sbjct: 299 LAAVIATKQTDIKKILAYSTMSQLGYMFIAVGLGFYST--------------GLFHVFTH 344 Query: 349 ALFKGLLFLGAGAIISRL-HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISE 407 A FK +LF+GAG II L H ++ K+ +P LIG +AIS IPP +GF S+ Sbjct: 345 AFFKAMLFMGAGGIIIALHHEQNIFKIAKHRANLPIIGLTFLIGVIAISGIPPFSGFFSK 404 Query: 408 WYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEA 467 + F + + + T L +MY I F + H + Sbjct: 405 DAILAAAFQEGQ----------YLIYGIALFTAFLTAYYMFRMYFIVFV--APNHHDVDY 452 Query: 468 QEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHT 527 T+ + +L+LA V H + + V Sbjct: 453 VYTSKTITLPLLILAIGAVGAGFLNLPSIFGGNHFVDTWLGQLNSKVIH--------LDH 504 Query: 528 QVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPL 587 L++L ++ + + + + T Sbjct: 505 STEYILMILSVVVAACGIFVAYKKYANFDLSKEETET----------------------- 541 Query: 588 RVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHL 647 + + D + + D +++ +S + K++ + Sbjct: 542 -GFVGRKLYVDELYDFLFVKSAKAISTFIDKVLDDKIIDAFIMKSSISFV-NVGKKVAMI 599 Query: 648 QSGDFRLYCLYVVAALVVLLIAIAV 672 Q+ + R Y ++++ + + + + + Sbjct: 600 QNANVRFYAVFMLIGMTCIFVYLYI 624 >UniRef50_A1WYN7 NADH dehydrogenase (Quinone) n=5 Tax=Gammaproteobacteria RepID=A1WYN7_HALHL Length = 772 Score = 332 bits (852), Expect = 2e-89, Method: Composition-based stats. Identities = 131/538 (24%), Positives = 217/538 (40%), Gaps = 32/538 (5%) Query: 6 LLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFA 65 +L L +L A L L R A V + + + Sbjct: 1 MLAAVLSGFLLAVLVPWLQPVLGRRAGWAFAALPAVLTLYFATFLPQIVGGETVWMEYTW 60 Query: 66 PPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASM 125 P +L+ +D LS L+IS + LY+ Y+ + + F+ASM Sbjct: 61 VPGLDVNLSFYVDGLSLLFALLISGIGTFVLLYASDYLDGDD--RQPRFYVHILAFMASM 118 Query: 126 VALLVMDNAFWFIVLFEMMSLSSWFLVIAR-QDKTSINAGMLYFFIAHAGSVLIMIAFLL 184 + L++ DN + +E+ S++S+ L+ +D + + + G + ++ F++ Sbjct: 119 LGLVLSDNLITLFIFWELTSITSYMLIGYDNEDAKARRYALQGLLVTVGGGLALLAGFIM 178 Query: 185 MGRESGSLDFASFRTLS---LSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSH 241 +G + + + LL G K+ +P H WLPRA AAP+ Sbjct: 179 LGIVGDTYTISELLEQGDVIREHEWYVPLTLLILLGAFTKSAQVPFHFWLPRAM-AAPTP 237 Query: 242 ASA-LMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDI 300 SA L S MVK G+F + K+ L G W L+ +GAI+ G +A+ I Sbjct: 238 VSAYLHSATMVKAGVFLLAKLHPAL----GDTALWMTLLPLVGAITMFTGAYFAVRSTGI 293 Query: 301 KRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAG 360 K +LA STV +G + + G+ T ++ LL H+L+KG LFL AG Sbjct: 294 KGVLANSTVMALGTLTMLAGIG-----------TEGAMIAFGAFLLAHSLYKGALFLVAG 342 Query: 361 AIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRV 420 A+ T ++ +MG L MP TA + L+++ IPPL GF+ + +S+ + Sbjct: 343 ALDHETGTKEILQMGGLRHAMPKTAVLAAVSALSLAGIPPLFGFLGKELMLESVLEAPYL 402 Query: 421 EAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLL 480 AV LA A++++ V G +A+ F G R+ +E E P M+ + Sbjct: 403 SAVLALLALGTAVLVVIVAGIVAI--------RPFFGE-RTETPKEPHEAPPGMLAGPAV 453 Query: 481 LAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLL 538 L L VL L I +A + P + S + + L Sbjct: 454 LGTLSVLFGLFPFLPEGLIGAVASSLAGEPVSVSLSLWHGINLPLIMSLFAIAAGAFL 511 >UniRef50_A6DPK7 NADH-ubiquinone/plastoquinone family protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DPK7_9BACT Length = 766 Score = 332 bits (852), Expect = 3e-89, Method: Composition-based stats. Identities = 134/539 (24%), Positives = 233/539 (43%), Gaps = 35/539 (6%) Query: 7 LTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAP 66 L +S+ L A+ A+ L + I S ++ +G +L + Sbjct: 3 LLFSVALIFLAAFATPALARFIPNKRRALFAIVPATSFYLIFSKAQEIASGTSLSEDYTW 62 Query: 67 -PFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASM 125 P +L R+D LS M L+I+ + + +Y+ Y+++Y K + IF+A+M Sbjct: 63 IPRFGINLNFRLDGLSFLMALLITGIGTLILIYAAGYLKDY--KANTRFYTIIQIFMAAM 120 Query: 126 VALLVMDNAFWFIVLFEMMSLSSWFLVIARQD-KTSINAGMLYFFIAHAGSVLIMIAFLL 184 + L++ DN + +E+ ++SS+ LV + + + + G + ++ LL Sbjct: 121 LGLVLSDNLISMFIFWELTTVSSFLLVGFNHENPDARKKALQALIVTAGGGLAMLAGLLL 180 Query: 185 MGRESGSLDFASF---RTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSH 241 +G +G+ + L + L AV +L G K+ P H WLP A AAP+ Sbjct: 181 LGNIAGTYQVSELIQHSELIKNHKLYEAVVILVCLGAFTKSAQFPFHFWLPNAM-AAPTP 239 Query: 242 ASA-LMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDI 300 SA L S MVK G+F + ++ L +W L++ +G + LL L +D+ Sbjct: 240 VSAYLHSATMVKAGVFLLARLTPVLGGTD----FWMYLLVCVGGFTMLLAATLGLIYRDL 295 Query: 301 KRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAG 360 K++LA+ST+ +GII L +G+ T A+ L HAL+K LF+ AG Sbjct: 296 KKILAYSTLSVLGIITLLIGMG-----------TEFSFKAAIMMLFAHALYKATLFMVAG 344 Query: 361 AIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRV 420 +I T D+ K+ L K MPWT AA + L+ + PP GF+++ Y + S + Sbjct: 345 SIDHEAGTRDITKLRGLRKVMPWTFAAAALAALSQAGFPPFTGFLAKEYFYGSALDHN-- 402 Query: 421 EAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLL 480 + + ++ + K+ F G R+ A E P +M++ + Sbjct: 403 -------LKAVLISSAFISSMFLFVLAFKIGFQPFLG--RANKKIHAHEAPPSMLLGPIA 453 Query: 481 LAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLL 539 L +L +L L +A I+ A A T V + T +L + +L Sbjct: 454 LGSLSLLFGLFPGPIAKYILSPALASFTTSFHPVKLKLWHGVNTALILSLITLTVGFIL 512 >UniRef50_Q21TB8 NADH dehydrogenase (Quinone) n=2 Tax=Proteobacteria RepID=Q21TB8_RHOFD Length = 671 Score = 332 bits (852), Expect = 3e-89, Method: Composition-based stats. Identities = 183/676 (27%), Positives = 301/676 (44%), Gaps = 17/676 (2%) Query: 3 ALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVA 62 QL+ L+L +LA L + R + L ++ ++ V+ + L G + Sbjct: 1 MNQLIEAVLVLMAGGALALLPARNIVRASAGL--VSQMIALVLVGSVALPVLFGGPDVTG 58 Query: 63 RFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMRE--YEGKGAAAMGFFMNI 120 + L R+D+L AF + + ++ S+Y++ Y+R+ + +N+ Sbjct: 59 DMPWAYPIGTLHFRLDALGAFFLSWSLPMTLLGSVYAMGYLRKYFDSPRHIGVHFGLLNM 118 Query: 121 FIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQ-DKTSINAGMLYFFIAHAGSVLIM 179 S + + V ++A F++ +E+ +LS+W LVI ++ AG Y H G + ++ Sbjct: 119 ISLSFILVYVGEHAVTFLLGWEIAALSAWLLVIWDYPNQKVRFAGFNYLVSTHVGLIFLV 178 Query: 180 IAFLLMGRESGSLDFASFRTLSL--SPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPA 237 A +++ + S + + + VFLL FG K+ P HSWLPRAH A Sbjct: 179 AAVMILYTNTQSWFLDDYGDWMSQNPGTVRNTVFLLLVTSFGLKSAFFPFHSWLPRAHAA 238 Query: 238 APSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAE 297 AP+H SALMSGV+ K G++ ++ L+ W G ++A SA++G LY + + Sbjct: 239 APAHVSALMSGVIHKAGLYALVHF---LMISGKPDEWMGWFLIAFSVTSAVVGGLYTVGQ 295 Query: 298 QDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFL 357 +D+KRLL +S+ ENVGI + GV +GLS P L +G G L H+LNHA FK LF Sbjct: 296 RDLKRLLGYSSTENVGIAGIGFGVGCLGLSWDMPTLVALGFGGGLLHVLNHAFFKCQLFY 355 Query: 358 GAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSL 417 AG + H D+E++G L K MP TA +IG +AISA+PP NGF SE+ + LF Sbjct: 356 AAGCVYQIKHVIDIERLGGLFKLMPVTAVCFIIGGVAISALPPFNGFASEFLIYSGLF-T 414 Query: 418 SRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVA 477 + +L + LA G ++ + + +G+ F G R EA E M+ Sbjct: 415 GESINIWAKLTLALTAAALAFVGAVSALSITRAFGVIFLGNARDASLPEAHEASGWMLFP 474 Query: 478 MLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLL 537 M+L V++ ++ + + F + P VA L T ++ L Sbjct: 475 MVLHTIGTVVLGVAPTLGFAMVAAPTALFLHLTPDAVALD-TLQSVTGTLLRIGAISAGL 533 Query: 538 LLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWEN-AMAPSGNGVMQPLRVVFSALFR 596 + + ++ L L R +R R W CGYG N M +G F + Sbjct: 534 VAVLVVVLALVGLRARLKRQTPNRNA-TWGCGYGAPNARMQYTGGSFSADFAGRFKNIML 592 Query: 597 LRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYC 656 + L + + R+ I + + Q L D RL Sbjct: 593 M---LQRKKAPAGYFPRDSYVITDCVDAVERRLFAVISHGDESASDLSQKLHEDDPRLAF 649 Query: 657 LYVVAALVVLLIAIAV 672 +AA+V + + + Sbjct: 650 SAGLAAIVAIGALVLL 665 >UniRef50_P16429 Formate hydrogenlyase subunit 3 n=77 Tax=Bacteria RepID=HYCC_ECOLI Length = 608 Score = 331 bits (849), Expect = 6e-89, Method: Composition-based stats. Identities = 216/634 (34%), Positives = 342/634 (53%), Gaps = 31/634 (4%) Query: 1 MDALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTL 60 M A+ L+ + ++ A++ + L+ ++GI VG + +G T L V + Sbjct: 1 MSAISLINSGVAWFVAAAVLAFLFSFQKALSGWIAGIGGAVGSLYTAAAGFTVLTGAVGV 60 Query: 61 VARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNI 120 + +++ L+A ++ + L + SLY++ + R + K +N+ Sbjct: 61 ----SGALSLVSYDVQISPLNAIWLITLGLCGLFVSLYNIDWHRHAQVKCNG---LQINM 113 Query: 121 FIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMI 180 +A+ V ++ N F+V+ E+M+L + FL + G L+F + G++L+ I Sbjct: 114 LMAAAVCAVIASNLGMFVVMAEIMALCAVFLTS------NSKEGKLWFALGRLGTLLLAI 167 Query: 181 AFLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPS 240 A L+ + G+LD L S ++LL GFG AG++PLH W+P+AH A + Sbjct: 168 ACWLLWQRYGTLDLRLLDMRMQQLPLGSDIWLLGVIGFGLLAGIIPLHGWVPQAHANASA 227 Query: 241 HASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDI 300 A+AL S V++KI G+L + L PLWWGI ++ +G I+A +G LYAL E +I Sbjct: 228 PAAALFSTVVMKI---GLLGILTLSLLGGNAPLWWGIALLVLGMITAFVGGLYALVEHNI 284 Query: 301 KRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAG 360 +RLLA+ T+EN+GIILL +G + G++L P L +GL+G L+HLLNH+LFK +LFLGAG Sbjct: 285 QRLLAYHTLENIGIILLGLGAGVTGIALEQPALIALGLVGGLYHLLNHSLFKSVLFLGAG 344 Query: 361 AIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRV 420 ++ R D+EK+G + K+MP + A L+G +A++A+PPLNGF EW +QS F LS Sbjct: 345 SVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSFFKLSNS 404 Query: 421 EAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLL 480 A +L GP+ V LA+TG LAVMC K+YG+TF GAPR+ AE A P M V+++ Sbjct: 405 GAFVARLLGPLLAVGLAITGALAVMCMAKVYGVTFLGAPRTKEAENATCAPLLMSVSVVA 464 Query: 481 LAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLA 540 LA CV+ ++A WL P + L +T V+ ++ LLL+A Sbjct: 465 LAICCVIGGVAAPWLLPMLSAAV---------------PLPLEPANTTVSQPMITLLLIA 509 Query: 541 MPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQ 600 PLLP + C+ R R G AW CGY E +M + +G P++ F+ + +LR+ Sbjct: 510 CPLLPFIIMAICKGDRLPSRSRGAAWVCGYDHEKSMVITAHGFAMPVKQAFAPVLKLRKW 569 Query: 601 LDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIV 634 L+P + +A + V+ I+ Sbjct: 570 LNPVSLVPGWQCEGSALLFRRMALVELAVLVVII 603 >UniRef50_Q67NV3 Na+/H+ antiporter subunit n=1 Tax=Symbiobacterium thermophilum RepID=Q67NV3_SYMTH Length = 754 Score = 331 bits (848), Expect = 8e-89, Method: Composition-based stats. Identities = 116/527 (22%), Positives = 220/527 (41%), Gaps = 33/527 (6%) Query: 33 KLSGITSLVGGVIGIISGITQLHAGVTLVARFAPPFEFADLTLRMDSLSAFMVLVISLLV 92 L + + ++ + + + P DL++ +D L+I+ + Sbjct: 8 WLRWRLGVAATAVAAVTFVLVVLTPEMSLVIPWVPQLGIDLSIHVDGWGRLFALLIAGIG 67 Query: 93 VVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLV 152 + LYS+ Y+ E G ++ +F+ +M+ ++ N V +E+ S+SS+ L+ Sbjct: 68 TLVVLYSIPYLGAREDLGK--FYAYLLLFMGAMLGVVYAGNLMLMYVFWELTSISSFLLI 125 Query: 153 IARQDK-TSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASF---RTLSLSPGLAS 208 + + + I G + ++ ++G G+ + ++ + L L + Sbjct: 126 GFWNTRDDAQYGALKAILITFGGGLCMLGGLAILGTVGGTFELSALLAKQAELLGHPLVT 185 Query: 209 AVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASA-LMSGVMVKIGIFGILKVAMDLLA 267 +L G K+ P H WLP A AAP+ SA L S MVK G++ I ++ Sbjct: 186 VALVLLLIGAFTKSAQFPFHIWLPDAM-AAPTPVSAYLHSATMVKAGLYLIGRLWPIFH- 243 Query: 268 QTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLS 327 W +V A+G ++ ++G A+ + D+K +LA ST+ +G+I+ G+ Sbjct: 244 ---THPLWVPVVAAVGMVTMVVGSFLAVQKTDLKAVLALSTISQLGLIMWLFGLG----- 295 Query: 328 LHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAA 387 T A FHLLNH+ FK LLF+ G I + T ++ + L + MP +A Sbjct: 296 ------TPEATQAAAFHLLNHSTFKALLFMVVGIIDHQTGTREIPLLSGLRRAMPVSAGL 349 Query: 388 CLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCF 447 ++G +++ +P LNGF+S+ ++ S G ++ L + Sbjct: 350 AMVGAASMAGVPLLNGFLSKEMFLTAVHGSS---------MGAAGALVATGASLLTTLYC 400 Query: 448 VKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFT 507 + + + G P + +E +++V LLLA + V + + + I+ A A Sbjct: 401 LILGHKIWFGEPH-ETPDVPEEGSPSILVPPLLLAVIIVAVGIYPGLVESAIVTPAVAAV 459 Query: 508 NTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRS 554 PA + T +T L +LA LP + + R Sbjct: 460 LQGPADLPHIALWHGFTPALLMTAIALGGGVLAYAGLPRVLAAFRRF 506 >UniRef50_C8NJU8 NADH ubiquinone oxidoreductase subunit 5 (Chain L)/multisubunit Na+/H+ antiporter, A subunit n=16 Tax=Corynebacterineae RepID=C8NJU8_COREF Length = 1018 Score = 330 bits (847), Expect = 9e-89, Method: Composition-based stats. Identities = 132/557 (23%), Positives = 230/557 (41%), Gaps = 36/557 (6%) Query: 6 LLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLH--AGVTLVAR 63 +L L L A A L + L R A L + G I G L+ Sbjct: 1 MLILFLALTAAAVFAPLLIRTLGRPAFGLLALVPAAGFFWVAYEFIQGTFRDGGELLLHY 60 Query: 64 FAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIA 123 P ++T+R+DSL+A L+I + + LY Y G+ +A G + F Sbjct: 61 DWMPSVHLNITMRLDSLAALFSLIILGVGALVLLYCWGYFDSNPGR-LSAFGGQLVGFAM 119 Query: 124 SMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKT-SINAGMLYFFIAHAGSVLIMIAF 182 +M L++ DN V +E+ S+ S+ LV ++ S + + G + +++ Sbjct: 120 AMYGLVISDNILLMYVFWEITSVLSFLLVGYYGERASSRRSAGQALMVTTLGGLAMLVGI 179 Query: 183 LLMGRESGSLDFASFRTLS---LSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAP 239 +L+G ++G F+ S LL G +K+ + P H WLP A AAP Sbjct: 180 ILIGVQTGVWYFSDVPAFEGNWADVPYISIGALLILAGALSKSAIAPTHFWLPGAM-AAP 238 Query: 240 SHASA-LMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQ 298 + SA L S MVK GI+ + ++A D + W ++ + +G + ++ AL ++ Sbjct: 239 TPVSAYLHSAAMVKAGIYLVARLAPDF----NVVSSWYLITLPLGIFTMIMSGWMALRQK 294 Query: 299 DIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLG 358 D+K +LA+ TV +G I+ G+ T LL L +H+LFK LF+ Sbjct: 295 DLKLILAYGTVSQLGFIISVAGIG-----------TREALLAGLALTFSHSLFKATLFMV 343 Query: 359 AGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLS 418 GAI T D+ ++ L +R P A I +++ IPPL GFI++ S+ Sbjct: 344 VGAIDHTTGTRDINQLSGLWRRQPLMFALAAISAASMAGIPPLFGFIAKETAIDSVLYEG 403 Query: 419 RVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPR--------STHAEEAQEV 470 + + G + + + + + + F + ST E+ V Sbjct: 404 MLRGMP----GNLMLAGIILGSIFTMAYSLYFLYGAFATKRQLFPRNNGVSTAVAESHPV 459 Query: 471 PNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVT 530 + +A +L +L VL+ L + L+ I+ T P +A + + Sbjct: 460 AFKLWIAPFILTSLTVLLGLFPAPLSAPIVTHLDNVTPGEPTYLALWHGFNLPLALSAII 519 Query: 531 PSLLLLLLLAMPLLPGL 547 + + L +P++ L Sbjct: 520 IVVGIALYWKLPVVHRL 536 >UniRef50_Q9PMA7 NADH-quinone oxidoreductase subunit L n=43 Tax=Epsilonproteobacteria RepID=NUOL_CAMJE Length = 596 Score = 330 bits (847), Expect = 9e-89, Method: Composition-based stats. Identities = 114/503 (22%), Positives = 198/503 (39%), Gaps = 40/503 (7%) Query: 3 ALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVA 62 L SL A L + ++ GI + + + L Sbjct: 1 MQNLALISLFSPFVAFLFASCFALSEKKQ--FVGIICSLLVALSAFCSLYLLFCNEAFNV 58 Query: 63 RFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFI 122 F + +D++S M+ V+ ++ YS+ YM EG ++ +F+ Sbjct: 59 SLFEWFAGVNFGFDIDAISLTMMSVVGIVATCVHFYSIFYMAHDEG--FNKFFAYLGLFV 116 Query: 123 ASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSIN-AGMLYFFIAHAGSVLIMIA 181 SM+ L++ DN V +E + L SW L+ + + A F + + +++ Sbjct: 117 FSMLFLVMSDNFLGLFVGWEGVGLCSWLLIGFWYKNDTYSFAANEAFIMNRIADLGMLLG 176 Query: 182 FLLMGRESGSLDFASF--RTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAP 239 + ++G+L + SL + F G K+ P H+WL A A P Sbjct: 177 IFWLYLQAGTLKYDEVFSMAQSLDHNALILIATCLFIGAMGKSAQFPFHTWLADAM-AGP 235 Query: 240 SHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQ 298 + SAL + MV G++ +++ + L ++ +GA A+ AL + Sbjct: 236 TPVSALIHAATMVTAGVYLVIRASTLY----DLVPEVSYIIALLGAFVAIFAASMALVVR 291 Query: 299 DIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLG 358 D+KR++A+ST+ +G + +A G+ G+ ALFHL HA FK LLFLG Sbjct: 292 DLKRIIAYSTLSQLGYMFVAAGLGAYGI--------------ALFHLATHAFFKSLLFLG 337 Query: 359 AGAIISRLHTH-DMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSL 417 AG ++ ++ D++KMG L K + TA IG LA++ I P GF S+ F Sbjct: 338 AGNVMHAMNDKLDIKKMGGLFKPLKITAILMCIGSLALAGIYPFAGFFSKDLILGYSFIS 397 Query: 418 SRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVA 477 ++L + L ++ + F R H E E ++A Sbjct: 398 FHHG----------IFLVLLIAAFLTAFYSFRLLMLVFFTPAR--HDEHPHEASKIALLA 445 Query: 478 MLLLAALCVLIALSASWLAPKIM 500 M L L ++ + Sbjct: 446 MSPLMVLAIIAGFFEHSFFEYLS 468 >UniRef50_A1SQ81 NADH dehydrogenase (Quinone) n=2 Tax=Actinomycetales RepID=A1SQ81_NOCSJ Length = 664 Score = 330 bits (847), Expect = 1e-88, Method: Composition-based stats. Identities = 193/603 (32%), Positives = 295/603 (48%), Gaps = 14/603 (2%) Query: 62 ARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIF 121 + + L L F++LV + V +++++ Y + + + F Sbjct: 60 LDLSTALPLTGVALDPTPLGGFVMLVAGAVGAVAAVFAIGY--AHGPAASRTSWAALPAF 117 Query: 122 IASMVALLVMDNAFWFIVLFEMMSLSSWFLVI--ARQDKTSINAGMLYFFIAHAGSVLIM 179 + SM + +A F++++E+M+L+S LV+ R + +A + Y + H L++ Sbjct: 118 LVSMQLVPAAADAVSFLLMWELMALASAVLVLTEHRDREEVRSAALWYAAMTHLSFGLLL 177 Query: 180 IAFLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAP 239 + F ++ E G F + + + AS F+L GF KAG +P H WLPRAHPAAP Sbjct: 178 LGFTVLVEEGGGTGFDAMSAVDPTSLQASIAFVLLIAGFATKAGAVPFHVWLPRAHPAAP 237 Query: 240 SHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQD 299 SH SA+MS MVK+G++G L VA+ LL G P WWG +V+A+GA+SA G+L A D Sbjct: 238 SHVSAVMSAAMVKMGVYGALLVALRLLP--GGPTWWGFVVVALGAVSATYGILQASVTSD 295 Query: 300 IKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGA 359 +KRLLA+ST ENVG++ LA+G AM+ S L+ L L +HA FK LFLGA Sbjct: 296 LKRLLAYSTTENVGLMFLALGTAMLLRSHDVSAPADAALVACLLLLTSHAAFKTALFLGA 355 Query: 360 GAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSR 419 GA++ D+++MG LA RMP T A +G L +A+P GF++EW QSL +R Sbjct: 356 GAVLHATGERDLDRMGGLAARMPVTNVAFALGALGAAALPLSVGFVAEWTLLQSLIHGAR 415 Query: 420 VEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAML 479 + + PI++ ++A+T GLA++ FVK YGI F PRS+ A EA+E M AML Sbjct: 416 PDDRLVAAMMPISVAVVALTAGLALLTFVKAYGIAFLARPRSSGAAEAREATPGMRTAML 475 Query: 480 LLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLL 539 + A V + L LA A S +A+ V + + +L Sbjct: 476 VAAVAVVGLGLVPGPLADLAGRAAGVADP------GSEVAVDLPGIAGGVLDPVAVSVLA 529 Query: 540 AMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGW-ENAMAPSGNGVMQPLRVVFSALFRLR 598 + P +RR RR AW CG M + +PL VF R Sbjct: 530 VLLAAPVGVVALAAARRRRRRRVDLAWGCGGARVSPRMQYTATSYAEPLARVFDDAVRPE 589 Query: 599 QQLDPT-LRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCL 657 + + T ++ L Q + + R+ +P++ R+ + LQ+G Y Sbjct: 590 RDVVVTHYSESRYLVERVQFRQRLDEVVETRLYQPVLRVGDRVGAAARRLQNGSIHRYLG 649 Query: 658 YVV 660 Y Sbjct: 650 YSF 652 >UniRef50_Q2GF39 NADH dehydrogenase I, L subunit n=2 Tax=Neorickettsia RepID=Q2GF39_NEOSM Length = 655 Score = 329 bits (844), Expect = 2e-88, Method: Composition-based stats. Identities = 132/670 (19%), Positives = 245/670 (36%), Gaps = 54/670 (8%) Query: 2 DALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVG--GVIGIISGITQLHAGVT 59 + L++L++S++ S R ++ L ++S + I S L G Sbjct: 3 NILRMLSYSIVFLPLLSCLLCCFFIRCRESVCLQLLSSFLIGLAAISSWSLFFTLEDGEA 62 Query: 60 LVARFAPPFEFAD----LTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMG 115 + + +D L+ M +V++ + V YS+ YM+ K Sbjct: 63 FLLPLFEWISVGSLQALFRVNIDKLTVLMFVVVNTVSFVVHCYSIAYMKNDPCKS--RFF 120 Query: 116 FFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSIN-AGMLYFFIAHAG 174 ++++F +M+ L+ + + +E + + S+ L+ K S N A M F + G Sbjct: 121 AYLSLFTFAMLVLVSAGDLLQLFLGWEGVGVCSYLLIGFWFRKESANVASMKAFLVNRVG 180 Query: 175 SVLIMIAFLLMGRESGSLDFASF--------RTLSLSPGLASAVFLLAFFGFGAKAGMMP 226 +I + + G+L+ L + + L+ F G +K+ + Sbjct: 181 DFCFLIGIFSVYKIFGTLELKGIISDVGFHSGETILGFDSLTFICLMLFIGCMSKSAQLG 240 Query: 227 LHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAI 285 LH+WLP A P+ SAL + MV G+F + +++ ++M +G Sbjct: 241 LHTWLPDAM-EGPTPVSALIHAATMVTAGVFLLARLSPLF----ECTELVRHIIMWVGVS 295 Query: 286 SALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHL 345 +A G + AL + DIKR++A+ST +G + A G + GL A+FHL Sbjct: 296 TAAFGSVVALCQDDIKRIIAYSTCSQLGYMFAACGASAYGL--------------AIFHL 341 Query: 346 LNHALFKGLLFLGAGAIISRL-HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGF 404 HA FK LLFL AG +I + D+ KMGAL ++ T +IG LA+ I P GF Sbjct: 342 STHAFFKALLFLCAGNVIHSVGGEQDVHKMGALRNKIFSTYCMMIIGSLALCGIFPFAGF 401 Query: 405 ISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHA 464 S+ SL I ++L +T + ++ + F G ++ Sbjct: 402 YSKDLIISSLSHAE------------IPFILLILTAFCTSVYSCRLLMLVFFGE-QNFSL 448 Query: 465 EEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGT 524 ++ P M++ + L L ++ L T G+ Sbjct: 449 KKFHSPPVGMVLPLAPLVLLSLISGYLGVKLLVNSSFWVQTGLVFRQVTEMHGLVHFLPL 508 Query: 525 FHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNG-- 582 ++ +L LP ++ +F + + + Sbjct: 509 IFALAGFFVVFVLEGRRISLPRIFVCLSLFTLLSFLLNFYLGVVSFIFSIGLILVNRSGV 568 Query: 583 VMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAK 642 ++ + V S F + V + +Q+L+ Sbjct: 569 ILNLFKRVLSCGFYFDKIYRVLFVGPLTHCSRFFWKVIDIGCI-NLVPALLARLSQKLSS 627 Query: 643 EIQHLQSGDF 652 + LQ+G Sbjct: 628 GVLALQTGLL 637 >UniRef50_D1A433 Proton-translocating NADH-quinone oxidoreductase, chain L n=2 Tax=Streptosporangineae RepID=D1A433_THECD Length = 698 Score = 329 bits (844), Expect = 2e-88, Method: Composition-based stats. Identities = 142/633 (22%), Positives = 244/633 (38%), Gaps = 84/633 (13%) Query: 34 LSGITSLVGGVIGIISGITQLHAGVTLVARF---APPFEFADLTLRMDSLSAFMVLVISL 90 ++ + V V+ +I + L LR+D L+A + L++ Sbjct: 122 IACLPMAVATVLALIVAVAVWRHPGVRTGTLTLIPTGTIDIALGLRVDGLAALVALMVCG 181 Query: 91 LVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWF 150 + + LYS+ YM E + ++ F+++F A+M+ ++ + V +E+M + S+F Sbjct: 182 VALAVQLYSVAYMAED--RRYSSYAAFISLFTAAMLLVVYSGDLLVLYVGWEVMGVCSYF 239 Query: 151 LVIA-RQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRTLS--LSPGLA 207 L+ Q++ + A + F I G V +I ++G +G+ L G Sbjct: 240 LIGHHWQERANSRAAVKAFLITRLGDVGFLIGIFVLGVGAGTFSIGGVLERLPDLPQGTV 299 Query: 208 SAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLL 266 +A LL G K+ PLH+WLP A A P+ SAL + MV GI+ + + L Sbjct: 300 TAATLLLLAGVAGKSAQFPLHTWLPDAM-AGPTPVSALIHAATMVAAGIYVVAR----LY 354 Query: 267 AQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGL 326 A ++ + IS L L ALA+ D+KR+LA+ST+ + + + V Sbjct: 355 AAFAASAAALTVLGVLAVISMLGSALAALAQDDLKRVLAYSTISQLACMAAGLAVG---- 410 Query: 327 SLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAA 386 + A+FHL+ H FK LLFL AG++I + + + G L + MP T Sbjct: 411 ----------APVAAIFHLVAHGAFKALLFLAAGSVIFVTGSGLLRRHGGLRRAMPVTFW 460 Query: 387 ACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRV---EAVALQLAGPIAMVMLAVTGGLA 443 A IG A+ +PP++GF S+ + + + A + + L T + Sbjct: 461 AMTIGYAALVGLPPVSGFFSKDAIVGAAWHAAAHGERPAHLPGGVAWLICLALLATVAVT 520 Query: 444 VMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIA 503 + + +TF G PR+ A+E P M + LA L+ Sbjct: 521 AAYATRAWLMTFFGEPRAAFP--AREAPPLMTWPVAALAVPAALLGFF------------ 566 Query: 504 HAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTG 563 + S LL LL A +Y +W R A Sbjct: 567 ----------------GLGAPELRPHPLSALLSLLAAAAGAVAVYLVWNRDPAADP---- 606 Query: 564 DAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEP 623 G + PLR VF F L + + A + + Sbjct: 607 -----------------AGGLGPLRRVFEHGFYLDEVYAALVVRPVRAAARA--VLAVDR 647 Query: 624 FWDERVIRPIVSATQRLAKEIQHLQSGDFRLYC 656 + + + ++R ++ Q+GD + Y Sbjct: 648 RGIDAAVVGVAGRSRRAGGLLRRTQTGDVQTYL 680 >UniRef50_UPI00005100B6 putative monovalent cation/H+ antiporter subunit A n=1 Tax=Brevibacterium linens BL2 RepID=UPI00005100B6 Length = 1024 Score = 329 bits (843), Expect = 3e-88, Method: Composition-based stats. Identities = 110/524 (20%), Positives = 203/524 (38%), Gaps = 28/524 (5%) Query: 6 LLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFA 65 ++ + L + L R + L L + + + V+ Sbjct: 1 MILTVVALAALIIVTPFITRVLGRASGWLLAAAYLGIAGLFTPTAAEVMAGSTPEVSYQW 60 Query: 66 PPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASM 125 P DL LR D + + ++ V +YS Y+ + + M IF SM Sbjct: 61 IPAFGVDLALRADGIGVIFTYIALIIGAVVFVYSTGYLDR---GRNTSFYWLMVIFTFSM 117 Query: 126 VALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLM 185 V L++ ++ V +E+ SL+S+FL+ A + FI G + +++A ++ Sbjct: 118 VMLVLSNDLLVLFVCWELTSLASFFLIARSGSPGQAPA-LRTMFITFIGGLSLLVATGVI 176 Query: 186 GRESGSLDFASFRTLSL---SPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHA 242 +G+ + + + + S V +L K+ P HSWLP A AA + Sbjct: 177 IAVTGTTNVHEALSSPVWSAQSPVTSLVAVLIAVAAMTKSAQFPFHSWLPDAMAAATPVS 236 Query: 243 SALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKR 302 + L + +VK GIF +L+ A W L++ G I+A +G +AL + D+K+ Sbjct: 237 AYLHAAAVVKAGIFLLLRFTPAFHATPA----WNTLLIVAGLITACIGGWFALNQYDVKK 292 Query: 303 LLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAI 362 L+A+STV +G+I +G+ + + A H++ HALFK LF+ G + Sbjct: 293 LMAYSTVSQLGLITAVIGIG-----------SEAAIAAATLHVIAHALFKSGLFMMVGVV 341 Query: 363 ISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEA 422 T ++ ++ L + P + ++GC ++S IPPL GF+S+ + + + Sbjct: 342 DHLAGTRELTRIPQLMRAAPASFIVMIVGCASMSGIPPLLGFVSKEALFTAF-----GDT 396 Query: 423 VALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLA 482 G A+++ L K F A P M++A + Sbjct: 397 PGSAWTGWAALLVAVGASVLTFAYCAKTVWGAFIDGKPVDRARLGHGSP-VMLIAAAVPI 455 Query: 483 ALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFH 526 + ++ + I A V + Sbjct: 456 LASIPLSFALFVFDNPISQAVRAALYESTGPVHLALWHGVNVEL 499 >UniRef50_B9LUW7 NADH/Ubiquinone/plastoquinone (Complex I) n=13 Tax=cellular organisms RepID=B9LUW7_HALLT Length = 698 Score = 329 bits (843), Expect = 3e-88, Method: Composition-based stats. Identities = 119/476 (25%), Positives = 201/476 (42%), Gaps = 30/476 (6%) Query: 7 LTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAP 66 ++++ A+ + + I + V + S + + G Sbjct: 11 PLLAVLVSFVAAFFIVASYRSPNVREGW-TIVAAVAKFAIVASMLPAVLDGAVFEWSLGA 69 Query: 67 PFEF-ADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASM 125 + LR D+L + S L +V S YS+ YMR + + +++ Sbjct: 70 FLPGGIEFVLRADALGMLFAFLASGLWIVTSFYSIGYMRGNDEVNQTRYFAAFAVSLSAT 129 Query: 126 VALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHA-GSVLIMIAFLL 184 + + N V +E++S++++ LV + + AG Y G VL++ L Sbjct: 130 MGIAFAGNLVTIFVFYELLSIATYPLVAHDETDEARAAGRKYLAYTMFGGGVLVLAGTAL 189 Query: 185 MGRESGSLDFASFR---TLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSH 241 + +G++ F + + PGLA F L GFG KAG+MPLH WLP A AP+ Sbjct: 190 VYLIAGNVSFTAGGIEELANADPGLAMLAFFLLAIGFGVKAGIMPLHQWLPEAM-VAPTP 248 Query: 242 ASALMSGV-MVKIGIFGILKVAMDLLAQT-------GLPLWWGILVMAIGAISALLGVLY 293 S L+ V +VK G FG+ +V +D+ G+++ IGAI+ + Sbjct: 249 VSGLLHAVAVVKSGAFGVSRVVLDVFGPELVFDLSLPFGFSAGLVLSTIGAITLTAASII 308 Query: 294 ALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKG 353 AL + +K+ LA+STV + I+L +G+ GL+GAL H+ HA K Sbjct: 309 ALRKDHLKQRLAYSTVSQLSYIILGLGL-----------FGWYGLVGALLHIPAHAFMKL 357 Query: 354 LLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQS 413 LF AG + HT + +M + KRMP T A + L ++ IP L GF+S++Y Sbjct: 358 TLFFCAGNLHVSTHTDYISEMAGIGKRMPLTMGAFTVASLGMAGIPLLAGFVSKYYMLIG 417 Query: 414 LFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQE 469 + L + L ++G L + F + F A + A+ + Sbjct: 418 GIRMG----AQLTPVAYYLVGALLLSGVLNIAYFWPVIYTAFFEAEDAHDAKPLVD 469 >UniRef50_C0A4J1 NADH dehydrogenase (Quinone) n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A4J1_9BACT Length = 672 Score = 327 bits (839), Expect = 8e-88, Method: Composition-based stats. Identities = 149/692 (21%), Positives = 256/692 (36%), Gaps = 58/692 (8%) Query: 7 LTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHA----GVTLVA 62 L L L A + +F RLA + V+ +S L + + Sbjct: 8 LWLIPALPLAACVIGVFTSARSRLASTAALAAMAAAFVVSCLSLREALASPAAHATATLD 67 Query: 63 RFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFI 122 L+L +D L+AFM+++++ + + L+S YM++ ++++F Sbjct: 68 WINAGALKLPLSLLLDPLTAFMLVMVTFVGFLIFLFSTGYMKDDP--RYGKFFCYLSLFA 125 Query: 123 ASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLY-FFIAHAGSVLIMIA 181 A+M+ LL+ ++ V +E++ L+S+ L+ +K S A F + G + ++ Sbjct: 126 AAMLGLLISNSLLLLFVCWELVGLASYLLIGFWFEKPSAAAAAKKAFIVTRIGDLGFLLG 185 Query: 182 FLLMGRESGSLDFAS-------------FRTLSLSPGLA--SAVFLLAFFGFGAKAGMMP 226 L + + +L F L+L GLA +A+ LL F G K+G P Sbjct: 186 ILWLHSATDTLLFYDNGAGFLETTQLGSLAALALPGGLAVSTAIGLLIFCGAVGKSGQFP 245 Query: 227 LHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAI 285 LH WLP A P+ SAL + MV G+F + ++ L ++ IGAI Sbjct: 246 LHVWLPDAM-EGPTPVSALIHAATMVAAGVFLMARIQPLLTPDALA------VIATIGAI 298 Query: 286 SALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHL 345 +AL G + A A+ DIKR+LA+STV +G ++LA+GV A+FHL Sbjct: 299 TALFGAILATAQNDIKRVLAYSTVSQLGYMMLAIGVG--------------AWPAAIFHL 344 Query: 346 LNHALFKGLLFLGAGAIISRL-HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPP-LNG 403 L HA FK LLFLGAG++I H D+ K+G LA RM T A IG +A++ +P +G Sbjct: 345 LTHAFFKALLFLGAGSVIHAAHHEQDIRKLGGLAPRMKLTFATFAIGMMALAGVPFVFSG 404 Query: 404 FISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTH 463 F ++ + + T L G Sbjct: 405 FWAKEAILHGA---------HAWPVSQLPFLTALATVILTAFYMTAPRRRGVYGKTPHPR 455 Query: 464 AEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPG 523 P +M + ++LLA + + + P + + + + Sbjct: 456 RRTRARNPLSMTLPLVLLAICAIALGFLGTPAWPWLQAMLEGRAEVHGHGIFDEGTGLML 515 Query: 524 TFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWE---NAMAPSG 580 T V + L + + R + + + + Sbjct: 516 TSIALVAIGIGSGLAIYARRSRIQRGHDNATAPDPVERVAPGLFNAFAHRLYIDELYAAT 575 Query: 581 NGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRL 640 G + S L + T+ A + Sbjct: 576 VGRFTTIAAALSDFADRWIWGGAIRALAGLACFTGGVTRDTDEVNINGSFDATTDALRTT 635 Query: 641 AKEIQHLQSGDFRLYCLYVVAALVVLLIAIAV 672 A+ Q+GD R+ + V L++ + Sbjct: 636 ARAYSRTQTGDARVSLTGLALGFVALIVVTLI 667 >UniRef50_A0QQR3 NADH ubiquinone oxidoreductase subunit 5 n=9 Tax=Actinomycetales RepID=A0QQR3_MYCS2 Length = 993 Score = 327 bits (839), Expect = 8e-88, Method: Composition-based stats. Identities = 115/543 (21%), Positives = 218/543 (40%), Gaps = 31/543 (5%) Query: 6 LLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFA 65 +L L + +LA L + R+A + L V ++ + + V Sbjct: 35 MLAVLLAHAVATALAPLMVARWGRMAFFPLSLVPLGSLVWVALNWPS--PDNIPTVHVSW 92 Query: 66 PPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGK---GAAAMGFFMNIFI 122 P + D TLR D+L+A M +++ + + Y Y ++G+ + + F Sbjct: 93 VPELWMDFTLRFDALAAIMSVLVLAIGALVLFYCAHYFHHHDGRMEKRLPSFAAELVAFS 152 Query: 123 ASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKT-SINAGMLYFFIAHAGSVLIMIA 181 +M L+V DN + +E ++ S+ LV ++ S A + G + ++ Sbjct: 153 GAMFGLVVSDNMLVLYIFWETTTVLSFLLVGHYAERATSRRAATQALLVTTFGGLAMLTG 212 Query: 182 FLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSH 241 +++G +G+ + + AS L G +K+ ++P+H WLP A AAP+ Sbjct: 213 IVVLGNMAGTYLLSELIAAPPTGTAASVGIALILIGALSKSAIVPMHFWLPGAM-AAPTP 271 Query: 242 ASA-LMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDI 300 SA L + MVK G++ I ++ +W +V+ +G ++ LL A+ E D+ Sbjct: 272 VSAYLHAAAMVKAGVYLIARMTPGF----ADTAFWRPMVIGLGLLTMLLAGWRAVREYDL 327 Query: 301 KRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAG 360 K +LA+ TV +G+I + VG + +L L L+ HA+FK LF+ G Sbjct: 328 KLILAFGTVSQLGLITVMVGAGGPDM-----------MLAGLAMLIAHAMFKASLFMVVG 376 Query: 361 AIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRV 420 I T D+ ++ L + L +++A+PP GF+++ +++ Sbjct: 377 VIDHATGTRDIRRLAGLGRAHRPLLIIALGAVASMAALPPFFGFVAKEADLETVLHSP-- 434 Query: 421 EAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGA---PRSTHAEEAQEVPNTMIVA 477 AL A P + + V + ++ F G S E P ++A Sbjct: 435 ---ALGTAAPYVLTGIVVGSVFTTIYSLRFLWGAFAGKGLSGPSVRVAEMHRPPVNFLLA 491 Query: 478 MLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLL 537 +L+A ++ L L + A +A + + V + + Sbjct: 492 PAILSAAGLVFGLWPKGLDAVLEDYADTVPGGSTYHLALWHGVGLPLLLSIVVLATGFTV 551 Query: 538 LLA 540 L Sbjct: 552 FLV 554 >UniRef50_C1XJC0 NADH dehydrogenase subunit L n=2 Tax=Meiothermus RepID=C1XJC0_MEIRU Length = 610 Score = 327 bits (839), Expect = 9e-88, Method: Composition-based stats. Identities = 110/518 (21%), Positives = 210/518 (40%), Gaps = 41/518 (7%) Query: 29 RLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAPPFEFADLTLRMDSLSAFMVLVI 88 + + + V+G L +L +D+LS M++V+ Sbjct: 26 KRIGEPAAGWLASLLVLGSFLLGLVLLLQGGGRWALPDWLPGIPFSLNLDNLSGVMLMVV 85 Query: 89 SLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSS 148 + + + ++++ YM + G + + N+FIA+M+ L++ D+ + +E + L+S Sbjct: 86 TGVGFLIHVWAIGYM--HGDPGYSRFFSYFNLFIAAMLVLILGDSLPVVFIGWEGVGLAS 143 Query: 149 WFLVIARQDKT-SINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFR----TLSLS 203 + L+ + ++++ F + G + ++A L+ G+L + S Sbjct: 144 YLLIGFWYHERINVDSARKAFIVNRIGDLGFLLAMGLLWSMFGTLSISELAEKVEAGGYS 203 Query: 204 PGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVA 262 + G K+ +PL WLP A A P+ SAL + MV G++ +++ A Sbjct: 204 FTTLTLAGFFLLVGAMGKSAQVPLMVWLPDAM-AGPTPVSALIHAATMVTAGVYLLVRHA 262 Query: 263 MDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVA 322 L + L++ IG ++A G L +L + DIKR++A++T+ +G + +AVGV Sbjct: 263 FMLHDDA----YLSGLIVFIGLLTAFYGALCSLGQWDIKRIVAYTTLSQLGFMFVAVGVG 318 Query: 323 MVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRL-HTHDMEKMGALAKRM 381 A+FH++ HA FK L+F+ +G++I L D+ KMG + K + Sbjct: 319 --------------AYWVAIFHIVTHAFFKALMFMTSGSVIHALGGEQDVRKMGGMRKYL 364 Query: 382 PWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGG 441 P T LI A + PL GF S+ F P ++ + Sbjct: 365 PATHLHGLIATFASGGLVPLAGFWSKDAILAYSFEYG-----------PWLWFLMLLASV 413 Query: 442 LAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMH 501 LA + ++ Y + F G R E E P M+ +L + + + Sbjct: 414 LAALYSIRWYVLVFWGEYRGK--EHPHESPAVMLWPNHILMGGAIGVGFMGLPYVIDYKN 471 Query: 502 IAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLL 539 F V + +T +++ + L Sbjct: 472 FIEPFLTKAIGEFPHEKLPVLTEWVLILTSAVVAIAAL 509 >UniRef50_Q2S1W7 NADH dehydrogenase, putative n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S1W7_SALRD Length = 794 Score = 327 bits (838), Expect = 1e-87, Method: Composition-based stats. Identities = 126/558 (22%), Positives = 223/558 (39%), Gaps = 40/558 (7%) Query: 14 YLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAPPFEFADL 73 ++ A + R + G+ V+ P +L Sbjct: 11 FVLALASPWLTQLTGRATGWVYGLLPAAITGTLATLVGRVAAGETLRVSYTWVPGLDVNL 70 Query: 74 TLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDN 133 + +D LS F L+I+ + + +Y+ Y++ + G ++++F+A+MV L++ DN Sbjct: 71 SFYVDGLSLFFALLITGIGTLIYVYAGGYLKGHHHLG--RFFSYLSMFMAAMVGLVLADN 128 Query: 134 AFWFIVLFEMMSLSSWFLVIARQDK-TSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSL 192 F + FE+ S +S+ L+ D+ S A + AG + +++ F+LM + +G+ Sbjct: 129 LITFYIFFELTSFASFVLIGFNHDEAPSRRAAWQALLVTKAGGLALLVGFILMQQATGTF 188 Query: 193 DFASFRTLS---LSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASA-LMSG 248 ++ + LL G K+ P + WLP A AP+ SA L S Sbjct: 189 QISAILESGDVIRQHSFYLPIVLLVLAGAFTKSAQFPFYFWLPNAM-EAPTPVSAYLHSA 247 Query: 249 VMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWST 308 MVK GI+ + + L W +V IGA++ +L AL D+K +LA++T Sbjct: 248 TMVKAGIYVMARFHPVLSGTD----LWMWIVGGIGALTMVLSAWLALQYTDMKAILAYTT 303 Query: 309 VENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHT 368 + +A+ L++ L T V + + +L HA +K LF+ AGAI +H Sbjct: 304 I-----------MALGLLTMLLGLGTEVAVEACMVFILVHAFYKAALFMVAGAIDHEVHV 352 Query: 369 HDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLA 428 D+ K+ L RMP T AA ++ L+++ IPP GF+ + +++ + Sbjct: 353 RDITKLRGLWNRMPVTGAAAVLAALSMAGIPPFFGFVGKELIYKAATHFDPAAVAVTVAS 412 Query: 429 GPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLI 488 + ++A G L F G + E A + ++LA V + Sbjct: 413 VLANVALVASAGLL--------VIRPFSGEV-NDVTEHAHRPAAGLWFGPVVLAVFSVGL 463 Query: 489 ALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLY 548 L+ L A P A G ++ P L L + + G Y Sbjct: 464 GLAPWLL--------DAAFLGPSAGAVLGASIAPHLALWHGFTLELGLSAVTVAAGVGTY 515 Query: 549 WLWCRSRRAAFRRTGDAW 566 W R + + W Sbjct: 516 LAWTGLRTNVAFQQFERW 533 >UniRef50_Q12ZH4 Na+/H+ antiporter subunit n=2 Tax=Methanosarcinaceae RepID=Q12ZH4_METBU Length = 513 Score = 326 bits (837), Expect = 1e-87, Method: Composition-based stats. Identities = 129/531 (24%), Positives = 231/531 (43%), Gaps = 43/531 (8%) Query: 1 MDALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTL 60 + L + + + S +FL + L+ SL +I II + + G+ + Sbjct: 3 ISMTHLPILLVAVPILMSALMIFLRSNANVQKWLNVSVSLAMMLISIILLLQVWNGGIQV 62 Query: 61 VARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNI 120 + + L D LS+ MV++ S++ + LYSL Y+ N+ Sbjct: 63 YE--VGEWGKYGIVLVADLLSSGMVVLSSIVSFLALLYSLDYIEGRSLNST--YHSLFNL 118 Query: 121 FIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDK------TSINAGMLYFFIAHAG 174 +A + + + F V FE++ L+S LVIA + + A Y + G Sbjct: 119 LVAGLNGTFLTGDIFNMFVFFEILLLASCGLVIANEKGGVTKSSDKMEATFKYLILNMIG 178 Query: 175 SVLIMIAFLLMGRESGSLDFASF-------RTLSLSPGLASAVFLLAFFGFGAKAGMMPL 227 S +++IA + G+L+ A P A+ LL FG KA + P+ Sbjct: 179 SFVMLIAVASLYATVGTLNMADLSVKISTMSAAGTLPWHIYAIALLFIVVFGNKAAIFPM 238 Query: 228 HSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISA 287 H WLP HP APS SA++SGVM+K+G +GIL++ + +++ + ++ Sbjct: 239 HYWLPDVHPTAPSPISAMLSGVMIKVGAYGILRIFFLIFRDALF--LLQPIIILLALVTI 296 Query: 288 LLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLN 347 ++G + A+ + D+K+LLA+S+V +G + L +G+ +V L AL ++ N Sbjct: 297 IIGAVSAVGQNDVKKLLAYSSVSQIGYVFLGIGIG-----------SVYALAAALVYMAN 345 Query: 348 HALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISE 407 HA+ K +LFL +G II T DM MG + K P + A LIG ++I+ +PP+ GF+++ Sbjct: 346 HAIAKSMLFLTSGGIIHHAGTRDMRHMGGMNKTSPIMSIAFLIGAMSIAGLPPMGGFVAK 405 Query: 408 WYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTH---A 464 + + + I + + + + + + F G R Sbjct: 406 FILFDAGLRAEY----------YIPVAIALFFAVFTLFYMFRAWLLMFWGETRDVEEYGE 455 Query: 465 EEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVA 515 + + + + ++ LAAL + + A L IA + P A Sbjct: 456 YSSHKPSLMIALPIVSLAALVFIFGVYAEPLIALAQAIAEQLIDPQPYIDA 506 >UniRef50_C0W918 Na(+)/H(+) antiporter subunit n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W918_9ACTO Length = 966 Score = 326 bits (837), Expect = 2e-87, Method: Composition-based stats. Identities = 105/538 (19%), Positives = 204/538 (37%), Gaps = 21/538 (3%) Query: 6 LLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFA 65 LL + L + L + A + + + + T GV Sbjct: 2 LLALVALHMLVGGVVPLLARRIGTRAFFAAALVPAMSFAWLLTQAGTVTSGGVLGSQVAW 61 Query: 66 PPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASM 125 P LTLRM + + L+++ + + LY Y G A + F +M Sbjct: 62 IPTIGVSLTLRMGLVQWILALIVTGVGALVLLYCRWYFS--PGPAATRCLTLLTWFAGTM 119 Query: 126 VALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSIN-AGMLYFFIAHAGSVLIMIAFLL 184 + L+ D+ V++E+ ++ S+ L+ + + A + + G + +++ ++ Sbjct: 120 LGLVSADDLIVLYVMWELTTVYSYLLIGNDFTRKANRGAALTALIVTTIGGLAMLVGIVI 179 Query: 185 MGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASA 244 + + +L ++ + LA+ LL G +K+ ++P H WLP A AA ++ Sbjct: 180 LWVLTSTLSLSAIVAAPPTGALATVAALLMLVGALSKSALVPFHFWLPGAMAAATPVSAY 239 Query: 245 LMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLL 304 L + MVK G++ + L W + V +GA++ L+G +L + DIK LL Sbjct: 240 LHAAAMVKAGVYLVA----VLAPAFSSVPGWRLAVGLLGAVTMLIGGWRSLRQTDIKLLL 295 Query: 305 AWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIIS 364 A+ TV +G ++L G+ T L L + HALFK LFL G I Sbjct: 296 AYGTVSQLGFMVLLTGMG-----------TRSAALAGLAMTIAHALFKSALFLIIGIIDK 344 Query: 365 RLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEW--YTWQSLFSLSRVEA 422 T D+ ++ + +RM + ++ +++ +PP+ GF+ + + Sbjct: 345 SAGTRDLRELSGVGRRMRSLSLVMVLAAASMAGLPPMLGFVGKEAAFAALVALVSQGDGT 404 Query: 423 VALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLA 482 + ++ + + L + +++ P P M++A LL Sbjct: 405 GLSPAVAVLVLIAVVLGSVLTMAYSLRLVWGALALKP-GKAETTLTMPPRAMLIAPALLT 463 Query: 483 ALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLA 540 + L AS L + A + T + + + LL Sbjct: 464 LGSLAGGLLASRLGHVLEPYAESMPLGSATTHLALWHGLGAPLAASLVAVAGGTLLFL 521 >UniRef50_Q9ZZQ0 NADH-ubiquinone oxidoreductase chain 5 n=1 Tax=Cyanidioschyzon merolae RepID=Q9ZZQ0_CYAME Length = 666 Score = 326 bits (835), Expect = 2e-87, Method: Composition-based stats. Identities = 115/674 (17%), Positives = 237/674 (35%), Gaps = 74/674 (10%) Query: 6 LLTWSLILYLFASLASLFLLGLDRL--AIKLSGITSLVGGVIGIISGITQ----LHAGVT 59 + ++ L L + A + + + + II + Sbjct: 1 MYLTTVFGPLLGFLTCMLFGRFLGKIGACFIVCFCTAISLLFSIIIFYEVCIADYTNNIF 60 Query: 60 LVARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMN 119 + D L+A ++L I+ + ++ ++YS+ Y+ E + ++N Sbjct: 61 FTLWLSTGLLEIPWGFLFDPLTAVILLTINFVSLLVNVYSVEYIGEDPHQ--VRFIAYLN 118 Query: 120 IFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKT-SINAGMLYFFIAHAGSVLI 178 IF + L+ +N + +E + L+S+ L+ + + + + I G + Sbjct: 119 IFAFFITILVTANNFLQIFLGWEGVGLASYLLINFWFTRLLASKSAIKAIIINRVGDFFL 178 Query: 179 MIAFLLMGRESGSLDFASFRT-----------LSLSPGLASAVFLLAFFGFGAKAGMMPL 227 +A L+ + SL++ + L + + L F G K+ + + Sbjct: 179 SLAIFLIFLKYKSLNYDIVFSITPFMSNYIECLGIKFSYLDMIRLFLFLGAIGKSAQIGM 238 Query: 228 HSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAIS 286 H WLP A P+ SAL + MV G+F I++ + L I + IGA + Sbjct: 239 HIWLPDA-IEGPTPVSALIHADTMVTAGVFLIVRCSPIL----EYSSNVLIFISVIGAST 293 Query: 287 ALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLL 346 +L A+ + D+K+++A+ST +G ++ A G++ S +FHL+ Sbjct: 294 SLFAGSVAIFQNDLKKVIAYSTCSQLGYMIFACGISNYIPS--------------IFHLV 339 Query: 347 NHALFKGLLFLGAGAIISRL-HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFI 405 NHA FK LLFL AG II L + D+ ++G+L + +P +IG L++ IP L GF Sbjct: 340 NHAFFKALLFLSAGYIIHSLFNEQDIRRIGSLLRILPIAYLMIMIGSLSLIGIPFLTGFY 399 Query: 406 SEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAE 465 S+ + F+ + + V+ L + ++ +TF P + Sbjct: 400 SKDLILELSFTSY-------FIINDFVYYLAIVSACLTAIYSTRLILLTFITKPNFSKIS 452 Query: 466 --EAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPG 523 + N + + +L+LA + + I + Sbjct: 453 LIKLHYSSNWITLPLLILAFASICFGF----ILKDIFVGLGTNFWGSSILINYNHIYFIE 508 Query: 524 TFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGV 583 + + + + + + S Sbjct: 509 AENLPIIIKWIPFFASIIGFFIIIIM--------------------QNNYAIFSFSFVRY 548 Query: 584 MQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKE 643 M F+ + L + + + + + + ++ ++K+ Sbjct: 549 MHSFFYFFNKKWYLDKIIIIIANSVLNFGYYVSLKIFDKGVIEYFGPFGLIKIIPYMSKQ 608 Query: 644 IQHLQSGDFRLYCL 657 ++LQSG Y Sbjct: 609 SRNLQSGQIAHYVF 622 >UniRef50_C0GJ41 NADH dehydrogenase (Quinone) n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJ41_9FIRM Length = 794 Score = 325 bits (833), Expect = 4e-87, Method: Composition-based stats. Identities = 137/563 (24%), Positives = 242/563 (42%), Gaps = 20/563 (3%) Query: 7 LTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAP 66 ++L +L S + ++ + + IS + AG A P Sbjct: 103 PLLVVLLPFAGALISGLIGRSNKDIRDCVATCTAFLTCVLAISMYPMVAAGEVSYA--LP 160 Query: 67 PFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMV 126 F L R+D ++ S + + + YS YMR + F+ + + + Sbjct: 161 EFMGLGLLFRVDFFGFVFAVMASFIWFLATFYSGEYMRHE--HASTRYYVFLLLSLGGTL 218 Query: 127 ALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMG 186 + + + + FE M+L S+ LV+ Q + ++ AG Y ++ G + +++A +++ Sbjct: 219 GVFLAGDFLSLFLFFEAMTLFSYVLVVHAQSEEAMAAGRNYLYMGIFGGLCLLVAIMMVT 278 Query: 187 RESGSLDFA-SFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASAL 245 +G+ A +L+ + L F GFG KAG PLH WLP+AHP AP+ ASAL Sbjct: 279 MHAGTTAIAPGLESLADMGTMGYVAAALFFIGFGIKAGAAPLHIWLPQAHPVAPTPASAL 338 Query: 246 MSGVMVKIGIFGILKVAMDLLAQTG-------LPLWWGILVMAIGAISALLGVLYALAEQ 298 +SG+M+K G +GI++V L +G ++ G ++ + AL ++ Sbjct: 339 LSGIMIKTGAYGIIRVFTLLYTPAQGESPLWYTTEQFGYALIWFGMVTMFTAAVLALVQR 398 Query: 299 DIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLG 358 KR+LA+S+V +G IL+ +G A +G G +H+LNHA FK +FL Sbjct: 399 HAKRVLAYSSVSQMGYILMGIGAAAYLGFDG-----AIGFAGWAYHILNHAFFKSAMFLM 453 Query: 359 AGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLS 418 GAI R H+ D K+G L +R P TAAA L+ AI+ +P NG++S+ ++ Sbjct: 454 VGAIYLRTHSLDYSKVGGLWRRFPVTAAAFLVAGAAIAGVPGFNGYVSKTLLHHAIVDAW 513 Query: 419 RVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAM 478 + + V + A + +TGGL V +++ F G R + A+E + Sbjct: 514 QAQGV---TSLWYAEKIFTITGGLTVCYIARLFYSLFLGPARDGTHKYARETFLERTIFA 570 Query: 479 LLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLL 538 A L ++ + I+ ++ F V L + Sbjct: 571 GFAAFLLYGGLAYSNVIERVILPMSSGFVYNDYYLNYVAKTGVWNVEDLSAIFISLGIGA 630 Query: 539 LAMPLLPGLYWLWCRSRRAAFRR 561 + LL + + ++ + R Sbjct: 631 VTFILLSRIDFALPLPQKLSVER 653 >UniRef50_Q1QZ48 NADH dehydrogenase (Quinone) n=15 Tax=cellular organisms RepID=Q1QZ48_CHRSD Length = 932 Score = 324 bits (831), Expect = 7e-87, Method: Composition-based stats. Identities = 125/522 (23%), Positives = 217/522 (41%), Gaps = 28/522 (5%) Query: 27 LDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAPPFEFADLTLRMDSLSAFMVL 86 L+ LV +I + L V +A P DL LR+D LS VL Sbjct: 24 RRHQCALLTAAMPLVALLIALREAPGVLAGDVPRLAFSWVPALGLDLALRLDGLSLMFVL 83 Query: 87 VISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSL 146 +I + ++ LY+ Y+ F+ +F+A+M+ +++ DN + +E+ SL Sbjct: 84 LILGIGLLIILYARHYLS--TADSMPRFYAFLMLFMAAMLGIVMADNLILLWMFWELTSL 141 Query: 147 SSWFLVIARQDK-TSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASF---RTLSL 202 SS+ L+ + + + + G + ++ +L+G+ G+ D + R + L Sbjct: 142 SSFLLIGFWNHQSAARKGARMALAVTGMGGLALLAGLILIGQIVGTFDMQTVLDSRDVIL 201 Query: 203 SPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASA-LMSGVMVKIGIFGILKV 261 LL G K+ P WLP+A AAP+ SA L S MVK G+F + ++ Sbjct: 202 DDPRYLPALLLILLGAFTKSAQFPFQFWLPQAM-AAPTPVSAFLHSATMVKAGVFLLARL 260 Query: 262 AMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGV 321 L W LV G ++ L G +AL + D+K +LA+STV ++G+I + G+ Sbjct: 261 HPALAGSQE----WLYLVSLTGLVTMLYGAYFALIKLDLKAILAYSTVSHLGLITMLFGL 316 Query: 322 AMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRM 381 + + ++ LFH+LNHA FK LF+ AG + T D+ K+ L + M Sbjct: 317 -----------DSRMAVVAGLFHILNHATFKAALFMTAGIVDHECGTRDIRKLKGLWRYM 365 Query: 382 PWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGG 441 P T A I +++ +P NGF+S+ + +A + + V Sbjct: 366 PMTTALAAITAASMAGVPLFNGFLSKEMMLAETLGTPLLGGLA-----WLIPTLATVGSI 420 Query: 442 LAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMH 501 LA ++ TF + E P M + +L+LA +CV++ + + ++ Sbjct: 421 LAASYSLRYVRNTFFDGKPRELEKTPHEAPFPMRLPILILAIICVVVGILPALTTTDLLT 480 Query: 502 IAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPL 543 A A ++ L + L Sbjct: 481 AAADAALVGAAPELHLSIWHGFNLPLLMSAIALAGGIAVYLL 522 >UniRef50_B1VI36 pH adaptation potassium efflux system transmembrane protein n=5 Tax=Actinomycetales RepID=B1VI36_CORU7 Length = 1123 Score = 324 bits (831), Expect = 7e-87, Method: Composition-based stats. Identities = 115/574 (20%), Positives = 220/574 (38%), Gaps = 43/574 (7%) Query: 28 DRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFA----------PPFEFADLTLRM 77 L+ + G + + + A + P L M Sbjct: 26 RNAGWPLAITFVALAGYVLKHARVPMEGGAHRWSATWIEGALPTSAAHPEGGDITFGLTM 85 Query: 78 DSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWF 137 D+LS F L+ L+ V +YS Y+ + G+ + M F+ +++ L++ + Sbjct: 86 DALSLFFTLLALLIGAVVFIYSTRYL--HPGEKILSFYLLMTAFMLAVLLLVLASDVALL 143 Query: 138 IVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASF 197 + +E++SL+S+FL+ + + G + ++ A +M +GS A Sbjct: 144 FIGWELVSLASFFLIARSGS-SGEAGATRTLILTFVGGLFLIAALGIMVGVTGSTQLADI 202 Query: 198 RT---LSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASA-LMSGVMVKI 253 + L +L +KA +P H WLP A AA + SA L + +VK Sbjct: 203 LADPSWGNNTVLTGVTAMLIAMAGFSKAAQIPFHFWLPEAM-AADTPVSAFLHAAAVVKA 261 Query: 254 GIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVG 313 G++ +L+ + + W +++ G ++AL+ LYA+ + D+K+L A+STV +G Sbjct: 262 GVYLLLRFSGIFAG----TVIWHYVLIITGMVTALMAALYAMQKTDLKKLTAYSTVSQLG 317 Query: 314 IILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEK 373 I+ +GV T + A+ H HALFK LF+ G + + + D + Sbjct: 318 WIVATIGVG-----------TPFAITAAIVHTAAHALFKSSLFMLVGVVDHQAGSRDTRR 366 Query: 374 MGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAM 433 +G+L +RMP+T + ++ +++AIPP GF+S+ + Q + + Sbjct: 367 LGSLWRRMPFTFWSAVVAAGSMAAIPPTLGFVSKEGMLTAFQEAP-----FSQAGVWVLL 421 Query: 434 VMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSAS 493 + V M + F E +E P ++ + L L + + Sbjct: 422 AVAGVGALATFMYSARYVFGAFVDGKTDES--ETREAPVSLWLPAALPGLLSLPAVFFLA 479 Query: 494 WLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCR 553 W + +IA A T +A+ G V L+++L + + W + Sbjct: 480 WPESWLDNIALATGVGEAHTH---LAMWHGINAPLVISVLVMVLGVIGIFQRKAIFRWFQ 536 Query: 554 SRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPL 587 + + W + Sbjct: 537 HQPLGPYTGAEIIHLVTEWMIRFGRVVAAPANSM 570 >UniRef50_B4U8H9 Proton-translocating NADH-quinone oxidoreductase, chain L n=6 Tax=Aquificaceae RepID=B4U8H9_HYDS0 Length = 633 Score = 324 bits (830), Expect = 8e-87, Method: Composition-based stats. Identities = 139/657 (21%), Positives = 261/657 (39%), Gaps = 55/657 (8%) Query: 10 SLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHA-----GVTLVARF 64 ++L+ S ++ L G R+ SG+ + GV+ I + + + + Sbjct: 4 LILLFPLLSFITIGLFGR-RIGDFASGVINAGAGVLSFIVALITMLSMKGPEDIVFYKFL 62 Query: 65 APPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIAS 124 D+ + +D LS + ++ + V +Y++ YMR G + ++F+ S Sbjct: 63 PISNTSVDIGIYIDKLSITTTVTVTFVASVIFVYAIGYMRYLFGNWTFKFFAYFSLFLFS 122 Query: 125 MVALLVMDNAFWFIVLFEMMSLSSWFLVI-ARQDKTSINAGMLYFFIAHAGSVLIMIAFL 183 M+ +L+ D+ +E + L+S+ L+ ++K + A + F + G ++ + Sbjct: 123 MLLILLGDSLILMFFGWEGVGLASYLLIGYFHEEKFATKASLEAFVMNRIGDWSFILGII 182 Query: 184 LMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHAS 243 G+L + + LL F G K+G +PLH+WLP A A P+ S Sbjct: 183 YTFWLFGTLSLPKLFENASYVPGITLATLLLFGGAVGKSGQIPLHTWLPNAM-AGPTPVS 241 Query: 244 A-LMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKR 302 A L + MV G++ + ++ L + G ++ L L A DIK+ Sbjct: 242 ALLHAATMVAAGVYMVARLYPIF----SLSPTTLSYITITGVVTMLFAALVATVHDDIKK 297 Query: 303 LLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAI 362 ++A+ST+ + I+ A+G+ A+FHL HA FK LLFL AGA+ Sbjct: 298 IIAFSTMSQLAIMFTALGMRFP--------------TAAIFHLTTHAFFKALLFLAAGAV 343 Query: 363 ISRL--HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRV 420 I+ L HT ++ +MG + K MP T A +IG LA+S PP G+ S+ + + Sbjct: 344 ITGLHHHTQNIFEMGGIKKYMPITFGAFMIGALALSGFPPFAGYFSKDAIVSLIMDKNT- 402 Query: 421 EAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLL 480 + ++ +T L + + F G + EE EV M ML+ Sbjct: 403 ----------LVATLILITSLLTAYYITREAFVVFLGE--GHYHEEPHEVEPIMSFPMLI 450 Query: 481 LAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLA 540 L+ L ++ + + + A + + G V SL LL + Sbjct: 451 LSFLSLMGGF-------LLWNYFSYMNSPIEAPFSFLAHSIYGITVAIVGISLSYLLYVK 503 Query: 541 MPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQ 600 + P + + + + + G + R+V+ A+ R+ Sbjct: 504 KFVDPNILYELFKPIHTLMKSQFYTEYIYHN------IIAKGYLAISRLVYKAVDRIIID 557 Query: 601 LDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCL 657 + V + + + + ++ IV T ++++ +QSG Y Sbjct: 558 GFVNGVAKVFMILVRFVWEFIDIRFIDIILHKIVIWTFSFGRKLKIIQSGYLNQYIF 614 >UniRef50_Q28L00 NADH dehydrogenase (Quinone) n=1 Tax=Jannaschia sp. CCS1 RepID=Q28L00_JANSC Length = 782 Score = 324 bits (830), Expect = 1e-86, Method: Composition-based stats. Identities = 114/646 (17%), Positives = 231/646 (35%), Gaps = 35/646 (5%) Query: 31 AIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAPPFEFADLTLRMDSLSAFMVLVISL 90 A +S + + L+ P L + +D LS L+I+ Sbjct: 16 AGWMSVVVPAALFLWFAQFLPAVAAGETPLIGIDWVPSMDVRLEMLIDGLSLTFALLITG 75 Query: 91 LVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWF 150 + + +LYS Y+ + ++ F+ M+ L++ DN V +E+ ++SS+ Sbjct: 76 IGTLVTLYSTRYLGNHPE--YPRFVLYLLTFMVGMLGLVLADNLIALFVFWEVTTISSYL 133 Query: 151 LVIARQD-KTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRTLS---LSPGL 206 L+ D S + + + G + ++ +L+G +G+ R + L Sbjct: 134 LIGFTSDSAKSRRSALQALLVTGTGGLALLAGMILLGAAAGTYSLTEIRGMGDAIRQHDL 193 Query: 207 ASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASA-LMSGVMVKIGIFGILKVAMDL 265 + +L G K+ P H WLP A AAP+ SA L S MVK G++ + ++ L Sbjct: 194 YIPILILFLAGAFTKSAQFPFHFWLPNAM-AAPTPVSAYLHSATMVKGGVYLMARMNPTL 252 Query: 266 LAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVG 325 W ++ G + + + A+ + DIK++LA++T+ +G + L +G Sbjct: 253 GGTEP----WFWALVIAGGFTTVFASVLAIRQTDIKQVLAYTTLMALGALTLFIGAG--- 305 Query: 326 LSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTA 385 + + A+ L+ H+L+K LFL G + ++ T ++ + LA++MP T Sbjct: 306 --------SSDAIKAAMLFLVVHSLYKAALFLMIGIVDNQTGTREVAHLRGLARKMPITF 357 Query: 386 AACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVM 445 A + ++++ IPP GFI + + +++ + AG + + L + Sbjct: 358 FAGALAAISMAGIPPFVGFIGKEFLYKAGLE--------IDTAGLWIIGTIFAASVLMFV 409 Query: 446 CFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHA 505 F G ++ E P +M + ++L AL + + A ++ A Sbjct: 410 AAGISVARPFLGRL-PDRFKDTTEGPISMWLGPIILGALSLYFGIFADIPEVWLVGPATD 468 Query: 506 FTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDA 565 +V + + + +L + L + Sbjct: 469 AVYGSDVSVDLYLFREVNDAFILSLVTFGVGFILYLLHGRIRDLLAAVFSANPIKFDPGW 528 Query: 566 WACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFW 625 G + A + + + +F + + Sbjct: 529 DRTLDGLKALAAWQTRHLQSGVLQRY--IFITFATFAGVIGATLYIQDALNFRVDVAAEL 586 Query: 626 DERVIRP-IVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLIAI 670 D+ + + V + L V + V LI I Sbjct: 587 DDLLFKHWAVLLFITAGALLTALTQSRMTAIAALGVVGIGVALIFI 632 >UniRef50_Q67P11 NADH dehydrogenase I subunit L n=1 Tax=Symbiobacterium thermophilum RepID=Q67P11_SYMTH Length = 640 Score = 324 bits (830), Expect = 1e-86, Method: Composition-based stats. Identities = 142/700 (20%), Positives = 236/700 (33%), Gaps = 100/700 (14%) Query: 6 LLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLV---A 62 L ++ L A++ F + + S+ ++ Q G + + Sbjct: 2 LPAIVVVPLLSAAIVGYFRNTWSKSLVSWVACGSVAISFALTVAVAAQYWGGGAVAPIRS 61 Query: 63 RFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFI 122 DL L D LS + LV++ ++ +YS YMRE E MN FI Sbjct: 62 ALTSWGSLLDLGLVADGLSLWWALVVTGAGLLIHIYSTAYMREDE--SYGRFMAKMNFFI 119 Query: 123 ASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKT-SINAGMLYFFIAHAGSVLIMIA 181 +M L++ DN + + + L+S+ L+ + + NA + F + G + Sbjct: 120 FAMTLLVLSDNFVGLAMGWGCVGLASYMLIGFYFTRPGAQNAAIKAFVMNIIGEAGLFAG 179 Query: 182 FLLMGRESGSLDFAS----FRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPA 237 + GS F +S + + LL G AK+ +PLH+WLP A Sbjct: 180 IAFIYANFGSFKFDDVFGAIAQGPVSASALNLIGLLLLIGAAAKSAQLPLHTWLPYAM-E 238 Query: 238 APSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALA 296 P+ SAL + MV G++ + + + + V IG + AL G L A Sbjct: 239 GPTPVSALIHAATMVTAGVYLVSRAYPIY----EVATGAAMAVAWIGGLGALFGALVAAG 294 Query: 297 EQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLF 356 + DIKR+LA+ST+ +G + LA G+ + A FH HA FK LF Sbjct: 295 QFDIKRVLAFSTLSQIGYMFLANGLG--------------AYVAADFHFFTHAFFKACLF 340 Query: 357 LGAGAIISRL-HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLF 415 L AG ++ D+ MG L R + LA+ +PP GF S+ + + Sbjct: 341 LAAGIVVHHYGGDQDIRHMGGLWYRDRFAGLTFGAAALALIGLPPFAGFFSKDEILLAAY 400 Query: 416 SLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQE------ 469 S + + V GL V+++ + F G A+ A + Sbjct: 401 SQGQ----------WALFAIAIVAAGLTAFYNVRLFSLVFLGDAYVPPAKPAGKKRSRAQ 450 Query: 470 -------------------VPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTP 510 P M + +LA L V+ F + Sbjct: 451 AAAEEAAHAHGHSHGHDHATPAAMKWPVAILAVLSVVSGWL--------------FFDHV 496 Query: 511 PATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGY 570 T H V P + L + + W R A D Sbjct: 497 QLTALEPAFPTLELHHESVNPVVAGLSVAVALAGGLISWYLYRPAGARRAVELDPLHK-- 554 Query: 571 GWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVI 630 + +F + D D V+ Sbjct: 555 -----------------PGILYNMFYVDTLYDVAFVQPARATAEFVGDLFDPRGID-GVV 596 Query: 631 RPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLIAI 670 + + ++ L ++ QSG R Y L V A +++++ Sbjct: 597 NGLGALSRGLGGLLRRWQSGLVRSYVLTVFAGVLLVVAYY 636 >UniRef50_A9A3Z6 Proton-translocating NADH-quinone oxidoreductase, chain M n=4 Tax=Thaumarchaeota RepID=A9A3Z6_NITMS Length = 517 Score = 323 bits (829), Expect = 1e-86, Method: Composition-based stats. Identities = 125/533 (23%), Positives = 224/533 (42%), Gaps = 48/533 (9%) Query: 7 LTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAP 66 ++L L+ + + ++ + + + I + +G T+ + Sbjct: 3 YALLQAVFLPLLLSPIAYILGRKVGPTPAMWFTFAILLYTTILVVNAALSG-TVEEHYPW 61 Query: 67 PFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGK----------------- 109 +F + +D L++ ++I +L + LYS YM + Sbjct: 62 TEQFGEFGFLLDGLASPFAIIIYVLSTILVLYSKPYMIHKFHEQFEEEQKINPSSSGQSS 121 Query: 110 -------------GAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQ 156 + +F M+ ++ N F + FE+M + +FLV Sbjct: 122 VVESSALSNYVNAKSGLYFALYLVFAMGMLGTVMSTNLIEFYIFFEVMLIPGFFLVALWG 181 Query: 157 DKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFF 216 D G+++ F HAG+V++++ FL++G GS DFA + + + + Sbjct: 182 DGPRRKIGLMFLFWTHAGAVVLLLGFLMIGLTIGSFDFADIKESEIPQDVVMISAIAIAI 241 Query: 217 GFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWG 276 G G K + H WLP H +AP+ SAL+S M+ IG +G+ ++ ++ L T Sbjct: 242 GLGVKLAVFMFHVWLPYVHGSAPTPISALLSPAMIGIGAYGVFRLIVEFLPSTFAE--LS 299 Query: 277 ILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVV 336 I G ++ L G AL + D+KRLLA+S++ +G +L +G ++ + Sbjct: 300 IWFHIWGLVTMLYGGAMALMQDDLKRLLAYSSISQMGYLLFGIG-----------SMSAM 348 Query: 337 GLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAIS 396 GL GA + H L KG+LF+ AG II ++ T + K+G LA +MP TA +IG L I Sbjct: 349 GLAGAEMMYITHGLGKGILFMMAGIIIVKVGTRSISKLGGLAGKMPITAVCAVIGALTIM 408 Query: 397 AIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFC 456 +PP +GF+ EW + + E L+ + + V L + + M F Sbjct: 409 GVPPTSGFMGEWILFYGALETAIEEGSTLR---AVTFGLGLVATALTMAYMLWMLKRVFF 465 Query: 457 GAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNT 509 G H E+ +E M M++LA V++ + I+ + Sbjct: 466 GK-TPEHLEKVKEGSWYMTAPMMVLAGFTVVLGIYPDIFLKTILPYMNGVLGI 517 >UniRef50_C5A3D6 Formate hydrogenlyase I subunit D (Mhy1D) n=2 Tax=Thermococcus RepID=C5A3D6_THEGJ Length = 664 Score = 323 bits (828), Expect = 1e-86, Method: Composition-based stats. Identities = 162/623 (26%), Positives = 267/623 (42%), Gaps = 45/623 (7%) Query: 7 LTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAP 66 L +++I ++ + L R+++K S + +G + + G + + F Sbjct: 3 LEYAIIAFIIGGVIGLV--RDYRVSVKASSFMAFLGSLALLGEVYHVYTNGPEMFSLFGI 60 Query: 67 PFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFF-MNIFIASM 125 P + LS +L+I ++ V SL+++ YM +E G + N F+ASM Sbjct: 61 PMN-------VSGLSNVFLLIIGIVGVAASLFAINYMDLFEKTGKGWVYAIAYNTFLASM 113 Query: 126 VALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVL-IMIAFLL 184 ++ +D+ +F++ +E+M+LSS+ LV + +NA + Y+ H + + +A Sbjct: 114 TLVVTVDSMEYFVMSWELMTLSSFILVFFSEKARDVNASVKYYITMHFLDTIPLFLALGT 173 Query: 185 MGRESGSLD---FASFRTLSLSPGLASAVFL-LAFFGFGAKAGMMPLHSWLPRAHPAAPS 240 G+ + F + + + VF L F AKAG+ P W+ + AAPS Sbjct: 174 AYSLIGNFEELTFENIGAALSTHHTSRLVFAGLLMIAFTAKAGLFPFSFWVAETYRAAPS 233 Query: 241 HASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDI 300 H SA+M+G M K+ ++GIL + G+ GI+V G I+ LYAL E + Sbjct: 234 HVSAIMAGAMEKMALYGIL---ALVWKTAGIEGDAGIIVALAGMITITYATLYALRENNA 290 Query: 301 KRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLT--VVGLLGALFHLLNHALFKGLLFLG 358 KRLLA+S++ +G I L +G+ MV + L T +G LFH LNHA+FK LFL Sbjct: 291 KRLLAYSSISQMGYIWLGIGIGMVLVPKGGFLGTIGALGAFAGLFHALNHAIFKASLFLS 350 Query: 359 AGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLS 418 AGA+ R T D+ ++G L +RM +TA A L LAIS +PP NGFIS+W + S +S S Sbjct: 351 AGAVEYRTGTVDLNELGGLGRRMKFTALAALFASLAISGVPPFNGFISKWLIYVSGYSSS 410 Query: 419 RVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAM 478 V+ + +K YG F G E +EVP M++ Sbjct: 411 NP-------LLIFGAVLAVFFSAGTLAYSMKFYGAQFGGE--MKRYENVEEVPAGMLLGQ 461 Query: 479 LLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLL 538 +LA L ++I + + P + +A + G L + Sbjct: 462 WILAGLTLIIGVFPRIVVPILNEPFNAPLTENIYRIGFGSVLFSP--------------V 507 Query: 539 LAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAP--SGNGVMQPLRVVFSALFR 596 + + LL L + + F + W CG + + G + +R Sbjct: 508 IFVILLGALAAALYLTFKPEFGKETKPWDCGSTEIDEDEYRTNAEGYYNWYEKKIGSFYR 567 Query: 597 LRQQLDPTLRLNKGLAHVTARAQ 619 L Sbjct: 568 LGDWFYTVGAGVIHYITRAYLWM 590 >UniRef50_C8XH11 NADH/Ubiquinone/plastoquinone (Complex I) n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XH11_NAKMY Length = 956 Score = 323 bits (828), Expect = 1e-86, Method: Composition-based stats. Identities = 126/602 (20%), Positives = 235/602 (39%), Gaps = 33/602 (5%) Query: 24 LLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAPPFEFADLTLRMDSLSAF 83 L R A+ + + V + ++ G + P + LRMD+L+ Sbjct: 29 CRRLGRGALIVLALLPAATTVWAAAMLPSVMNGGALTSSTRWVPALDLAIDLRMDALAMA 88 Query: 84 MVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEM 143 + L+I+ + ++ LYS Y + G + + F +M+ L+ +N +V +E+ Sbjct: 89 LTLIIAFIGMLVLLYSARYFPADDD-GLSKYSGSLVAFAGAMLGLVWANNLILLVVCWEL 147 Query: 144 MSLSSWFLVIAR-QDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRTLSL 202 + S+ L+ R K+S A + AG ++++I +++G +G+ + Sbjct: 148 TGILSYLLIAHRAGKKSSRTAASQALMVTTAGGLVMLIGAVMLGTLAGTFTISEILAAPP 207 Query: 203 SPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVA 262 S L + LL G +K+ ++P WLP A A ++ L + MVK GI+ L++A Sbjct: 208 SGPLVTVSVLLLIVGGISKSAIVPFQFWLPGAMAAPTPASAYLHAATMVKAGIYLFLRLA 267 Query: 263 MDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVA 322 W +++A+G + L G + AL ++D+K LLA+ TV +G++ L +G Sbjct: 268 PAF----ATLPVWQPVLIALGGGTMLFGAVLALRQRDLKLLLAYGTVSQLGLMTLVIGTG 323 Query: 323 MVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMP 382 LLG L L+ HA FK LF G I + T D+ K+ L +RMP Sbjct: 324 -----------NPDALLGGLAMLIAHATFKAPLFFTVGIIDTTTGTRDLTKLSGLGRRMP 372 Query: 383 WTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGL 442 A ++ L+++ IPP+ GF ++ + L G +A+V++A+ + Sbjct: 373 LLATLAVLSALSMAGIPPMLGFAAKEADYAGLLEGGT--------GGYVAVVVMALGSAI 424 Query: 443 AVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHI 502 + F + A + M+ + + A+ +++ ++ L P + Sbjct: 425 TTAYSARFIWGAFAAK-KDVPAADPAPTSAFMVGPTMAMVAIGLVLGIAPGLLEPLLQSY 483 Query: 503 AHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRT 562 A T P +A + +L L + W R R R Sbjct: 484 AQTAGPTHPGAMA-------LWHGWSIPLALSAAGWLIGAAVFLGQRAWERRRDLIARPG 536 Query: 563 GDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTE 622 + + +GV + + L L L + E Sbjct: 537 AEPGIAYRVGIKGVDVVADGVTNATQRGSLPVSLGAILLVLVLFPGTMLLTSGVGPKDVE 596 Query: 623 PF 624 Sbjct: 597 VI 598 >UniRef50_B2A693 Proton-translocating NADH-quinone oxidoreductase, chain M n=2 Tax=Clostridia RepID=B2A693_NATTJ Length = 499 Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats. Identities = 114/513 (22%), Positives = 232/513 (45%), Gaps = 30/513 (5%) Query: 5 QLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARF 64 L +++ +F S L + + + +++++ ++ I + ++ + Sbjct: 6 HLPIIIVLIGIFVSFILPGLHFIKKNLNEYVSLSAMILMLVIAIYLVIEVSSNGPFTYVV 65 Query: 65 APPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREY-EGKGAAAMGFFMNIFIA 123 + +D L +M L+I+ + + LY+ + + + + +A Sbjct: 66 GEWAPPWGIEFNVDYLGVYMTLIITGIGFLALLYASRDLHHELQENALSLYYPLYMLLMA 125 Query: 124 SMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFL 183 SM+ +++ ++ F VL E+ L+S ++ +++K +I A + Y + GS +++ Sbjct: 126 SMIGMVLTNDIFNLFVLLEITLLTSVAIICVKENKDTIEASLKYLMLNALGSATVLMGIA 185 Query: 184 LMGRESGSLDFASFRT-----LSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAA 238 L+ +G L+ P + A+ L F GFG K+ + P+H WLP AH +A Sbjct: 186 LLYIITGHLNMTYIAQELAVNFEQYPTVIMAIVALFFVGFGVKSALFPMHVWLPDAHGSA 245 Query: 239 PSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLW-WGILVMAIGAISALLGVLYALAE 297 PS +SA++SG+++K+ + +++ +L + L L G +++ A +LG ++A+A+ Sbjct: 246 PSPSSAVLSGLVIKVYVVSLIRFYFIVLPEEILELMPVGEILLWFAAAGMILGSMFAIAQ 305 Query: 298 QDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFL 357 +DIK++LA+S+V + + L +G+ L++ G L H+LNHA+ K +LFL Sbjct: 306 EDIKKMLAYSSVAQISYVFLGIGL-----------LSLTSFQGGLLHILNHAIIKSMLFL 354 Query: 358 GAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSL 417 AGAII + M + R P +G A+ IP NGFIS+WY Sbjct: 355 IAGAIIYTSGIRKISHMHGVGLRYPLIMICFTLGAFAMIGIPGTNGFISKWYLALGALDA 414 Query: 418 SRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQ--EVPNTMI 475 R P ++++ V+ L + ++ + +F G + + ++P M Sbjct: 415 GR----------PFFVLVILVSSLLNGVYYLPIVVNSFFGDMQDADINFIKCNKLPWQMF 464 Query: 476 VAMLLLAALCVLIALSASWLAPKIMHIAHAFTN 508 ++L L + I L + + Sbjct: 465 FPIVLCGFLIIFIGLYPALPLSLVEPAVEFLMP 497 >UniRef50_B6YWQ6 Hydrogenase 4, subunit 3 n=2 Tax=Thermococcus RepID=B6YWQ6_THEON Length = 520 Score = 322 bits (827), Expect = 2e-86, Method: Composition-based stats. Identities = 131/536 (24%), Positives = 248/536 (46%), Gaps = 47/536 (8%) Query: 7 LTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAP 66 +I L S+ + G ++ I + + V + LV F Sbjct: 8 PVIPVIFAFALPLFSIIIKGNRKIIQAYVLIGTGLALVSTFKLFQKTYASDRPLVYTFGG 67 Query: 67 PFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMV 126 + +D LSA + LV + L+ + S+YS Y+ G A ++ Sbjct: 68 WSAPVGVIYEVDKLSALIALVTAGLMFLISIYSYRYLEHENG--LEWYYTLYLGLEAGLL 125 Query: 127 ALLVMDNAFWFIVLFEMMSLSSWFLVIARQDK-TSINAGMLYFFIAHAGSVLIMIAFLLM 185 +L+ +AF V+ E+ S++++ LV+ +D+ S+ AG+ Y I G+ + +A ++ Sbjct: 126 GVLLTGDAFNLFVMIEVTSIAAYALVMFYRDRGDSVYAGLKYALIGAVGTTMYFLALGIL 185 Query: 186 GRESGSLDFASFRTLSLSPGLAS-------------AVFLLAFFGFGAKAGMMPLHSWLP 232 G+++ A LA + F KA ++P H WLP Sbjct: 186 YGAFGTVNLADLTAKVHGMDFPLTGAPVGDIVVASGVALALATWAFLIKAAIVPNHFWLP 245 Query: 233 RAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGI------LVMAIGAIS 286 AHPAAPS SA++SG++V +G++ +++ + T +P I +V+ +GA+S Sbjct: 246 EAHPAAPSPISAILSGLVVNVGVYSLIRFLYTVYGGTLIPELARIVSVLSNIVVVLGAVS 305 Query: 287 ALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLL 346 +L G ++D+KRL+A+ST+ ++G + +AVG+ T +GL ALFHL+ Sbjct: 306 SLFGAAMMTVQKDVKRLIAYSTIMHMGYLFMAVGLG-----------TQLGLQAALFHLV 354 Query: 347 NHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFIS 406 NHA+ K LLFL AGA I + + +++ + L K+MP + I L++ +PPLN F S Sbjct: 355 NHAIAKALLFLAAGAFIHAIGSRNVDDLAGLGKKMPVATFSLAIATLSLVGVPPLNVFFS 414 Query: 407 EWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEE 466 + + +L ++L ++ +A++ +V+++ I + G PR + Sbjct: 415 KLLLFNALMEKGLGP-----------ALILVISSVIALVAYVRVFHIIWLGKPRKDIKIK 463 Query: 467 AQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVP 522 +M + L+LA +C+++ L+ + +++ A + + + + L Sbjct: 464 EH---ASMSLVCLVLAVICIIVGLATPIIVDGLINPAATQAMDYNSYINAVLDLAL 516 >UniRef50_B6YT76 Hydrogenase 4, component B or formate hydrogen lyase, subunit 3 n=1 Tax=Thermococcus onnurineus NA1 RepID=B6YT76_THEON Length = 659 Score = 322 bits (827), Expect = 2e-86, Method: Composition-based stats. Identities = 159/681 (23%), Positives = 301/681 (44%), Gaps = 39/681 (5%) Query: 6 LLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFA 65 ++ + LY ++++ L G + +IK+S + S + + + L G+ + F Sbjct: 1 MMEIPIALYSLSAISGLI--GDFKRSIKISSVLSAIASLSLLGIAAHALSRGLPVQESF- 57 Query: 66 PPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAA-MGFFMNIFIAS 124 + L +DSLS + +I+LL +V S+YS++YM + G F+ S Sbjct: 58 -----LGIPLIIDSLSLPFLFIIALLSLVVSVYSISYMEVHRDTGRPLAYTILYGTFVLS 112 Query: 125 MVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAG-SVLIMIAFL 183 +V + + N WF+ +E+M+L+S+ V R+ AG+ Y +V + +A Sbjct: 113 IVFVALTSNLLWFVFFWELMTLTSFIFVSWREQD----AGIKYLLTMQLANTVPLFVALG 168 Query: 184 LMGRESGSLDFASFR----TLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAP 239 ++ +GS SLSP ++ + F AK+G +P W+P A+ AAP Sbjct: 169 IIYSATGSFSVDYATLREVASSLSPVQLKLLYAMFLVTFLAKSGSVPFQFWVPDAYEAAP 228 Query: 240 SHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQD 299 S+ ++LM+GVM K+ ++G++++ + L G +++ +G ++ G LYAL E Sbjct: 229 SNIASLMAGVMEKMAVYGLIRLLCNALP---CSEGIGYVLVIVGILTMTFGTLYALRETH 285 Query: 300 IKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGA 359 KRLLA+S+V +G I AVG+ M+ L++ L + L +FH NH LFKGLLFL + Sbjct: 286 AKRLLAYSSVGQMGYIWFAVGMGMIFLTMGMESLAYLAFLAGVFHSFNHTLFKGLLFLIS 345 Query: 360 GAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSR 419 G T D+ ++G L + MP+++ +IG L+++ +P +GF+S+W +Q+ + Sbjct: 346 GNFEYSAGTADLNELGGLRRAMPYSSLFTVIGALSLAGVPLFSGFLSKWMIYQAGYYSG- 404 Query: 420 VEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAML 479 VM + + +K+Y F G P + E A+EVP+ M++ Sbjct: 405 ------IGLFVFGSVMAVFMSAVTLAYSLKLYTSAFGGEP-NERTENAREVPSGMLLGEG 457 Query: 480 LLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLL 539 ++A + + + + P + + T S + S + + Sbjct: 458 IIALTSLAVGILPAIAYPILTISLNGGDVTVTMGSISTDFEYFSPIALLLAVSFIAVASY 517 Query: 540 AMP------LLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSA 593 + + P + D + + + G+ + RV+ SA Sbjct: 518 FVFRPKTTNVKPWNTGALFLPEERYGAKARDYYRQYFTEMEGLYKLGSAAGKVGRVLLSA 577 Query: 594 LFR----LRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQS 649 L L + L T R K + T + DE P++ + +A + Sbjct: 578 LMSVYLVLARGLVYTGREKKRSFTLDELRHRTVRYLDEAFFAPMMDLLKNIAVLAAGISV 637 Query: 650 GDFRLYCLYVVAALVVLLIAI 670 L+ ++ +++L + + Sbjct: 638 SMDELFLASMLTTVIILALLV 658 >UniRef50_A4X1Y8 Proton-translocating NADH-quinone oxidoreductase, chain L n=4 Tax=Micromonosporaceae RepID=A4X1Y8_SALTO Length = 649 Score = 322 bits (825), Expect = 3e-86, Method: Composition-based stats. Identities = 150/668 (22%), Positives = 252/668 (37%), Gaps = 68/668 (10%) Query: 1 MDALQLLTWSLILYLFASL------------ASLFLLGLDRLAIKLSGITSLVGGVIGII 48 M A LL L + + A R AI + + ++ + Sbjct: 1 MTAPVLLGTLLPVVPLVTGLLGLLLPPASPEAGAARRRARRAAIAFGTTGAALSLLLAVA 60 Query: 49 SGITQLHAGVTLVARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEG 108 L +R+DS A + + ++ + + +YS+ Y+R Sbjct: 61 LLAILDAPAEATRTWIDFGGLTVTLGVRLDSTVALVAVAVAAVALAVQVYSVGYLRSGPH 120 Query: 109 ------KGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQD-KTSI 161 +++F A+M+ ++V + +V +E+M L S+ L+ + + Sbjct: 121 DEVDVDHRYPPYAAQISLFTAAMLLVVVAGDLILLLVGWEVMGLCSYLLIAHERRLPAAP 180 Query: 162 NAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAK 221 A M F + G V ++ L+G +GS A + GL +A LL G K Sbjct: 181 AAAMKAFLVTRVGDVGFLLGIALLGVSAGSFRIADVLGHDHATGLLTAACLLLLAGVAGK 240 Query: 222 AGMMPLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVM 280 + PLH+WLP A A P+ SAL + MV G++ + ++ + ++ Sbjct: 241 SAQFPLHTWLPDAM-AGPTPISALIHAATMVAAGVYVVARLFPLFVQVPVALA----VLG 295 Query: 281 AIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLG 340 + +I+ LLG A+A+ D+KR+LAWSTV +G + A+ V Sbjct: 296 VLASITLLLGAFAAIAQDDLKRVLAWSTVSQLGYLTGALAVG--------------APTA 341 Query: 341 ALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPP 400 ALFHLL HA FK LLFL AGA+I T M ++G L + MP T + LIG A++ +PP Sbjct: 342 ALFHLLTHAAFKALLFLAAGAVIHAAGTALMSQLGGLRRTMPVTFWSMLIGLGALAGLPP 401 Query: 401 LNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPR 460 L+GF S+ + + A G + L ++ TF GAPR Sbjct: 402 LSGFFSKDAVLYAAEEAALHGGPAPTWVGWSVWLAGLAGVTLTAGYATRLLLRTFFGAPR 461 Query: 461 STHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIAL 520 S + + P M +LLL L+ L+ A + AT L Sbjct: 462 SP-LRQPHDPPAVMRWPVLLLTVPAALLGLA-----GFSGAFAGWLEPSWSATRERPADL 515 Query: 521 VPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSG 580 +P + P++LL L L + W R Sbjct: 516 LPVDPLVHLGPTVLLPLGLLALGAGLAWARWRRDPGGDP--------------------- 554 Query: 581 NGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRL 640 ++ LR + + F L + ++ + A A++ + + + A L Sbjct: 555 AALLGRLRPLSARAFWLDDLQHSLVVRP--VSRLAAGARTADEVVVDGAVTGSGRAAWWL 612 Query: 641 AKEIQHLQ 648 + Sbjct: 613 GGGLAAWH 620 >UniRef50_B3QPF9 NADH dehydrogenase (Quinone) n=1 Tax=Chlorobaculum parvum NCIB 8327 RepID=B3QPF9_CHLP8 Length = 774 Score = 321 bits (824), Expect = 5e-86, Method: Composition-based stats. Identities = 128/572 (22%), Positives = 234/572 (40%), Gaps = 34/572 (5%) Query: 1 MDALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTL 60 M L LL + + +++A L + L ++ Sbjct: 1 MRNLSLLFLIITGFAVSAIAPYLYRLLKARFVWFGVAFPLTLFASFMLKYPQVASGVPVR 60 Query: 61 VARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNI 120 P +L+ +D LS V++++L+ LY+ Y+R YE F+ + Sbjct: 61 ERWSWVPSLGLNLSFVLDGLSLTFVMLVTLIGAAVFLYASVYLRHYEEAD--RFFGFIGM 118 Query: 121 FIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINA-GMLYFFIAHAGSVLIM 179 F+ SM+ +++ DN + +E+ S+SS+ L+ + A + + AG + ++ Sbjct: 119 FMTSMLGVVLADNMLLLFLFWELTSISSFLLIGFNHHAPTSRASALKALLVTGAGGLALL 178 Query: 180 IAFLLMGRESGSLDFA---SFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHP 236 LL+G +GS + + + L S L A+ L G K+ P H WLP A Sbjct: 179 AGMLLLGSVTGSFEISSFYAMNDLITSHRLYPAIVALILVGAFTKSAQFPFHFWLPDAM- 237 Query: 237 AAPSHASA-LMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYAL 295 AAPS SA L S MVK GI+ I + ++ W ++ GA + + L + Sbjct: 238 AAPSPVSAYLHSATMVKAGIYLIARFNHEIGGTA----LWQDTILVAGATTMIFAGLLSY 293 Query: 296 AEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLL 355 + D+KRLLA+ST+ +G +++ +G+ + + + +L+ H+L+KG L Sbjct: 294 RQSDLKRLLAYSTLSVLGTLVMLLGIG-----------SKLAIKAFFIYLIAHSLYKGTL 342 Query: 356 FLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLF 415 FL AG + T D+ K+G L K MP TA + ++ + PL GFI + ++++ Sbjct: 343 FLVAGTLDHETGTRDVSKLGGLWKAMPVTAVTAALASFSMMGVIPLIGFIGKETLYKAVL 402 Query: 416 SLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMI 475 + + +V+ L V+ + F G PR ++ E P M+ Sbjct: 403 EVQPWGR--------VLIVLAVAASALLVVVTFLVGFRPFLGKPRPE-LQKVHEAPVAML 453 Query: 476 VAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLL 535 V +LA +L+ L + ++ + + + I L G + + L Sbjct: 454 VGPFILALSGLLLGLFPDFFVGHLLE--ESAVSIISQRLDIEIELWHGFNLVLLLSFVTL 511 Query: 536 LLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWA 567 L + + LL + + W Sbjct: 512 LAGVGLYLLRSIALSRIENLHLPGLVKPSIWY 543 >UniRef50_C0XU58 CPA3 family monovalent cation (K+ or Na+):proton (H+) antiporter-3, MnhA subunit n=1 Tax=Corynebacterium lipophiloflavum DSM 44291 RepID=C0XU58_9CORY Length = 954 Score = 321 bits (823), Expect = 6e-86, Method: Composition-based stats. Identities = 136/634 (21%), Positives = 233/634 (36%), Gaps = 42/634 (6%) Query: 12 ILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAPPFEFA 71 +L LA L R A + + L VIG ++ ++ P Sbjct: 8 VLGATVVLAPFVGRVLGRNAGWMLALPLLGAAVIGALAYVSPSAGDAHAETVAWIPSLNV 67 Query: 72 DLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVM 131 D LR+D LS ++++ L+ YS Y+ + + M F A+M L++ Sbjct: 68 DFALRIDGLSIVFLMLVLLIGAGVLAYSTRYL----HQSKPSFYLLMCGFAAAMSTLVLT 123 Query: 132 DNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGS 191 DN F + +EM +L S+FL+ + + + G +L++ A ++M +GS Sbjct: 124 DNLVVFYIAWEMTTLCSFFLIA-NGGEKGYAPAIRTLLVTVGGGLLLLTATVIMCITTGS 182 Query: 192 LDFASFRT---LSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSG 248 + + PGL + V LL K+ P +WLP + A ++ L + Sbjct: 183 TQLSVVLADETWTQRPGLTTLVALLVAGAAFTKSAQFPFQAWLPDSMVAIAPVSAYLHAA 242 Query: 249 VMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWST 308 MVK GI+ IL+ + A W I ++ G I++L G + A+ + D+K LLA+ST Sbjct: 243 AMVKAGIYLILRYSPMFAAVDA----WHIALVTAGLITSLFGAMTAVKQSDLKALLAYST 298 Query: 309 VENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHT 368 + +G+++ VG+ T L A+ H + HA+FK LF+ G + T Sbjct: 299 MSQLGLLVAVVGIG-----------TQEALTAAIVHTIAHAVFKAALFMSIGIVEHETGT 347 Query: 369 HDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLA 428 + ++ L RMP T A +I +++ +PPL GF+S+ + S EA+ Sbjct: 348 RNFHELRNLRVRMPVTQAIVVISAASMAGLPPLAGFVSKEMLLAAGLSAPHKEALVT--- 404 Query: 429 GPIAMVMLAVTGGLAVMCFVKMYGITFCGAPR--STHAEEAQEVPNTMIVAMLLLAALCV 486 + + VT + S ++ E + +LAA V Sbjct: 405 --LVTGGIVVTSIFTFAYSYRYVLGVLGDRRNQLSGTSKTVGEASPSFFAVPAILAAATV 462 Query: 487 LIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPG 546 I + L + A T + + L L L A+ + G Sbjct: 463 AIGIYPHMLNGPVADAVLATTGEFEDPHLALWHGLN-----------LPLALSALVIACG 511 Query: 547 LYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLR 606 W R +AF A G + + + + R P L Sbjct: 512 AVLAWRRWAVSAFLDVFRAPITGVEVVESFRSGTIALGERFTAATGTTSQRRHLAAPLLG 571 Query: 607 LNKGLAHVTARAQSTEPFWDERVIRPIVSATQRL 640 L +R P + Sbjct: 572 LVAIGLVGVFTLGDVPEVVGDR-YDPADWMLLFI 604 >UniRef50_D0LWA1 NADH/Ubiquinone/plastoquinone (Complex I) n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LWA1_HALO1 Length = 827 Score = 321 bits (823), Expect = 6e-86, Method: Composition-based stats. Identities = 131/685 (19%), Positives = 264/685 (38%), Gaps = 48/685 (7%) Query: 7 LTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGII-----SGITQLHAGVTLV 61 + +++ +L + + L + + + + + +G Sbjct: 1 MVLGIMVLFAGALWAPLVNRLSARFAGWLCALAPLALLAWFLRETGRLSASVDASGQPQP 60 Query: 62 ARFAPPFEFAD--LTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMN 119 + + + R+D L+ ++I+ + + +Y+ Y+ E+ +G + Sbjct: 61 REWLETLFWLPDAVAFRLDGLALLFAVLITGIGALVLIYAGGYLGEHPRRGT--FFASLF 118 Query: 120 IFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIAR-QDKTSINAGMLYFFIAHAGSVLI 178 +F+A+M+ ++V D+A V +E+ S++S+ L+ Q + A I AG + + Sbjct: 119 LFMAAMLGIVVSDDAIALFVFWELTSVASFLLIGFEDQRPEARVAARKALLITGAGGMAL 178 Query: 179 MIAFLLMGRESGSLDFASFRTLSLS---------PGLASAVFLLAFFGFGAKAGMMPLHS 229 ++ +L+ + L +S +S L + LL G K+ +P H Sbjct: 179 LVGLVLLAHAAMDLGLSSADATRISRLSEVPLREHPLYTPALLLVLLGAFTKSAQVPFHI 238 Query: 230 WLPRAHPAAPSHASA-LMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISAL 288 WLP A AAP+ SA L S MVK G+F + +++ L G L W ++ G ++ L Sbjct: 239 WLPAAM-AAPTPVSAYLHSATMVKAGVFLLARLSPAL----GGTLLWQGSLITAGVLTML 293 Query: 289 LGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNH 348 + A+ ++D+KR+LA+STV +GI+++ +G+ + A+ L+ H Sbjct: 294 VAGYLAVRQRDLKRILAYSTVAVLGILVMLLGIGDRH-----------AVEAAIVFLVAH 342 Query: 349 ALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEW 408 AL+K LF+ AG I T D+ ++G L + MP T AA L+ L+ + PP+ GF+ + Sbjct: 343 ALYKAALFMVAGNIDHGTGTRDVGRLGGLRRAMPLTCAAALLAALSKAGAPPMFGFLGKE 402 Query: 409 YTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQ 468 + S + + A+ + A + + ++A + V F G+ R Sbjct: 403 LLYGSRLTRDDLSALLIAAAVAVNITLVAAAFLVGV--------RPFFGS-RRETPHAPH 453 Query: 469 EVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQ 528 E+P +M + LLAA + L A + A A PA V + Sbjct: 454 EMPPSMWLGPALLAAGGIFAGLVPGPFAHTLGSSAVAAITGQPARVELALWHGVNPEALL 513 Query: 529 VTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLR 588 + L L + + + + R G + + S L Sbjct: 514 ILGLSALTLGVGVLVYRAVARRTRRHAGDGVAPAGASAGPIERAFERVVDSIPPRAGQLT 573 Query: 589 VVFSALFRLRQQ--LDPTLRLNKGLAHVTARAQSTEPFWDERVIRP-IVSATQRLAKEIQ 645 + + + R+ + + E ++ +++ T Sbjct: 574 RLLCSGYLHRELSVILLAAVALLAVPLAAVFVDGLEIPTLPLTVKGALLALTVAGGAVCA 633 Query: 646 HLQSGDFRLYCLYVVAALVVLLIAI 670 + + + L + L+ Sbjct: 634 AITTSRLGAVAALGIMGLGITLLFA 658 >UniRef50_Q6L0I7 NADH-quinone oxidoreductase chain L n=1 Tax=Picrophilus torridus RepID=Q6L0I7_PICTO Length = 607 Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats. Identities = 113/619 (18%), Positives = 242/619 (39%), Gaps = 87/619 (14%) Query: 66 PPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASM 125 F D + +D LS M ++S + ++ +++S+ YM + ++IF+ASM Sbjct: 56 TWFYNIDFGIYIDHLSLIMAFIVSSVSLIINVFSVFYMGKDPRNRT--YFSEISIFVASM 113 Query: 126 VALLVMDNAFWFIVLFEMMSLSSWFLVIARQ-DKTSINAGMLYFFIAHAGSVLIMIAFLL 184 + L++ N + + +E++ + S+ L+ + A I G + +I + Sbjct: 114 LGLVLSSNLVFTFLFWELVGIMSYLLIGFWYFKPNAAYAAKKSLLITRFGDLSFIIGLSI 173 Query: 185 MGRESGSLDFASFRTLS------------LSPGLASAVFLLAFFGFGAKAGMMPLHSWLP 232 + +D AS ++ + + + F G +K+ PLH WLP Sbjct: 174 IYVSLNRIDPASPLSIPYLISNSGYISKIIGKYTLTLSLMFIFIGALSKSAQFPLHVWLP 233 Query: 233 RAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVL 292 + + ++ + + MV G++ I ++ + + IG+++A+LG L Sbjct: 234 DSMEGPTTVSALIHAATMVTAGVYIIARLFPLFYYSYSM-----YTIAIIGSVTAILGAL 288 Query: 293 YALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFK 352 +A D+KR+LA+ST+ +G + A+G++ + G+ A++ LL HA+FK Sbjct: 289 MGIAVNDMKRILAYSTMSQLGYMFSALGMSGIFFYS--------GVSFAMYQLLVHAVFK 340 Query: 353 GLLFLGAGAI-ISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTW 411 LLF+ A + + L T D+ +G L ++MP TA LIG + ++ IPP GF S+ Sbjct: 341 ALLFMSAAVVMMYTLETRDIRSLGGLFRKMPATAILMLIGSITLAGIPPTAGFYSKDEIV 400 Query: 412 QSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVP 471 A + + ++L +T + + +MY F G ++ AE A++ Sbjct: 401 ------FLGYAYFERTGNILPFMLLLITEAVTSIYIFRMYFNIFLGKTKTKAAENAKDPK 454 Query: 472 NTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTP 531 ++ +++LA L + + I + +T V + IA + G + + Sbjct: 455 FIYLIPLIILAFLSLFLGPFRYNFYKFIDPHVYIYTPPAYIEVVTVIAALSGIYIAYIIY 514 Query: 532 SLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVF 591 ++ L + Sbjct: 515 NIN------------------------------------------------FNSGLYNII 526 Query: 592 SALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGD 651 F + + + + ++ + +D + + ++ +Q+G Sbjct: 527 RNRFYIDRFYN---YIANVFIEISFVTGIFDRRYDNFLDNMAGKIV-KTGTMLKRIQNGS 582 Query: 652 FRLYCLYVVAALVVLLIAI 670 Y ++++ L + + Sbjct: 583 LEYYIIFLLGGLAAIFTIV 601 >UniRef50_Q56227 NADH-quinone oxidoreductase subunit 12 n=3 Tax=Thermus RepID=NQO12_THET8 Length = 606 Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats. Identities = 139/625 (22%), Positives = 236/625 (37%), Gaps = 72/625 (11%) Query: 38 TSLVGGVIGIISGITQLHAGVTLVARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSL 97 L G++ + A +L +D+LS FM+L+++ + + + Sbjct: 30 GVLASGLVLASFLLGAGLLLSGGARFQAEWLPGIPFSLLLDNLSGFMLLIVTGVGFLIHV 89 Query: 98 YSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQ- 156 Y++ YM G + + N+FIA M+ L++ D+ + +E + L+S+ L+ Sbjct: 90 YAIGYMGGDPG--YSRFFAYFNLFIAMMLTLVLADSYPVMFIGWEGVGLASFLLIGFWYK 147 Query: 157 DKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRTLSL----SPGLASAVFL 212 + ++ F + G + M+ ++ G+L + + +P L + L Sbjct: 148 NPQYADSARKAFIVNRIGDLGFMLGMAILWALYGTLSISELKEAMEGPLKNPDLLALAGL 207 Query: 213 LAFFGFGAKAGMMPLHSWLPRAHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGL 271 L F G K+ +PL WLP A A P+ SAL + MV G++ I + + + Sbjct: 208 LLFLGAVGKSAQIPLMVWLPDAM-AGPTPVSALIHAATMVTAGVYLIARSSFLY----SV 262 Query: 272 PLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDP 331 + +G ++A G L A + DIK+++A+ST+ +G + LA GV Sbjct: 263 LPDVSYAIAVVGLLTAAYGALSAFGQTDIKKIVAYSTISQLGYMFLAAGVG--------- 313 Query: 332 LLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRL-HTHDMEKMGALAKRMPWTAAACLI 390 ALFH+ HA FK LLFL +G++I L D+ KMG L K +P T LI Sbjct: 314 -----AYWVALFHVFTHAFFKALLFLASGSVIHALGGEQDVRKMGGLWKHLPQTRWHALI 368 Query: 391 GCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKM 450 G LA+ +P L+GF S+ + + G V + L M ++ Sbjct: 369 GALALGGLPLLSGFWSKDAILAATLTYP--------FGGVGFYVGALLVAVLTAMYAMRW 420 Query: 451 YGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTP 510 + + F G R H E P M+ LLA VL A Sbjct: 421 FVLVFLGEERGHH--HPHEAPPVMLWPNHLLALGSVLAGYLALP----------HPLPNV 468 Query: 511 PATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGY 570 H + L+ L A L GL+ + +R AW + Sbjct: 469 LEPFLKPALAEVEAHHLSLGAEWGLIALSAAVALLGLWAGFVFFQRKV----FPAWYLAF 524 Query: 571 GWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVI 630 + A F + + + + A A Sbjct: 525 EAASREA-----------------FYVDRAYNALIVNP---LKALAEALFYGDRGLLSGY 564 Query: 631 RPIVSATQRLAKEIQHLQSGDFRLY 655 + A + L + + LQ+G R+Y Sbjct: 565 FGLGGAARSLGQGLARLQTGYLRVY 589 >UniRef50_B6J444 Sodium/proton antiporter protein n=5 Tax=Coxiella burnetii RepID=B6J444_COXB2 Length = 768 Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats. Identities = 131/567 (23%), Positives = 241/567 (42%), Gaps = 38/567 (6%) Query: 6 LLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFA 65 L +I L ++L + + L + I I I + G T+ + F Sbjct: 2 LTGIVIITLLVSALVPIVVHYLKGPRLGWGLALIPFLLFIYFIHLIPTIMHGGTIYSGFR 61 Query: 66 P-PFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIAS 124 P + + +D LS L+I+ + + +YS Y+ + ++ +F+AS Sbjct: 62 WFPDLNINFSFYVDGLSLLFGLLITGIGIPIVIYSAPYLENHPH--LTRYYGYLFLFMAS 119 Query: 125 MVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTS-INAGMLYFFIAHAGSVLIMIAFL 183 M+ L++ +N V +E+ S+SS+ L+ ++ + A + F+ G + ++ +F+ Sbjct: 120 MLGLVLANNLIVLFVFWELTSISSFLLIGLEHERPAARKAAVQALFVTVIGGLSLLASFI 179 Query: 184 LMGRESGSLDFASF---RTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPS 240 L+G + + A L + L + LL G K+ P H WLP A AP+ Sbjct: 180 LIGIVTHTYSVAQLLSQGNLLQNQPLFVPILLLMLIGAFTKSAQFPFHFWLPNAM-EAPT 238 Query: 241 HASA-LMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQD 299 SA L S MV++GI+ + + + WW +++ IG I+ L GVL A+ + D Sbjct: 239 PVSAYLHSATMVQVGIYLLARFHPLM----SHNYWWFVILTTIGGITMLAGVLLAVRQTD 294 Query: 300 IKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGA 359 +K +LA++T+ +G ++ +G + + A+ LL HAL+K LF+ Sbjct: 295 MKLILAYTTITALGSLVFLLG-----------STHDLIIKAAVAFLLAHALYKATLFMAV 343 Query: 360 GAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSR 419 G I + T D+ K+ L K MP T A L+ +++ +PPL GF + + + Sbjct: 344 GDIKHQTGTRDIGKVRGLHKAMPITFMAVLVAGASMAGLPPLLGFYVKELVYGASL---- 399 Query: 420 VEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAML 479 LA I ++ + + M + F G + + +E M V L Sbjct: 400 ----VAPLASHILTIIAVFSNMIMAMLAFLLVLRPFWGEQKP---KRVREANVNMSVNAL 452 Query: 480 LLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLL 539 LLA+L +L+++ + ++ A + P + + SL+ LL Sbjct: 453 LLASLTLLLSIFPFVINHTVLSPAVSAILRRPLKTKLTLWHGFTP---SLVLSLITLLGA 509 Query: 540 AMPLLPGLYWLWCRSRRAAFRRTGDAW 566 + L + W +R + R G W Sbjct: 510 IVLYLKRAEFRWILARFDSVYRHGPVW 536 >UniRef50_C7MG69 NADH:ubiquinone oxidoreductase subunit 5 (Chain L)/multisubunit Na+/H+ antiporter, MnhA subunit n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MG69_BRAFD Length = 981 Score = 320 bits (820), Expect = 1e-85, Method: Composition-based stats. Identities = 114/544 (20%), Positives = 216/544 (39%), Gaps = 31/544 (5%) Query: 4 LQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVAR 63 + T L + A + + + R A + + + L + + Sbjct: 3 TSVFTMLLAHLVAALVGPFLVRRIGRNAFYPLAVVPGASALWLLTLDPRALADAPRVESV 62 Query: 64 FAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIA 123 P DL R+D+LS + L+ + + V +Y Y + G + F Sbjct: 63 PWIPAFGIDLAFRLDTLSWVLTLIATAIGAVVLVYCARYFK-DTEPGLGRFAGVLTAFAG 121 Query: 124 SMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTS-INAGMLYFFIAHAGSVLIMIAF 182 +MV L++ D+ +E+ ++ S+ LV QD+ + A + AG + +++ Sbjct: 122 AMVGLVLADDVMMIYTFWELTTVFSYLLVGHYQDRQASRRAALNALISTTAGGLAMLVGL 181 Query: 183 LLMGRESGSLDFASFRTLSL---SPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAP 239 L++ +GS + + + L G +K+ ++P H WLP A AAP Sbjct: 182 LMVAASAGSFRLSEIVIDPMWQSAGPYLLTAMALILVGATSKSALVPTHFWLPGAM-AAP 240 Query: 240 SHASA-LMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQ 298 + SA L + MVK G++ IL++A L + +++ +GA + L+G AL + Sbjct: 241 TPVSAYLHAAAMVKAGVYLILRMAPALTHLEIVT----MILAGLGAATMLVGGWRALRQT 296 Query: 299 DIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLG 358 DIK LLA+ TV +G + G+A T + L L+ HA+FK LF+ Sbjct: 297 DIKLLLAYGTVSQLGFLAAVAGLA-----------THDAVFAGLAMLIAHAVFKAPLFMV 345 Query: 359 AGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLS 418 G I + T D+ + + + P A + +++A+P L GF+++ + +L+ Sbjct: 346 VGIIDKKFGTRDLRVLSGVGRAAPVVAVIGTLSAASMAAVPSLYGFVAKESIYTALWVAG 405 Query: 419 RVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAM 478 + + ++ L L V + F AP + E + + + Sbjct: 406 GWQR--------LLLLSLVAGSVLTVAYSWRFVHGAFGIAPGAPRVETPR-IAVLYWLPP 456 Query: 479 LLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLL 538 L+A + +A++A L + A + I + V L + L Sbjct: 457 ALVAVFSIGLAVAAGPLEEVLRAGAGVLPENGSEVHLAVIPHLGVPLLASVVTLGLGVGL 516 Query: 539 LAMP 542 A+ Sbjct: 517 SALA 520 >UniRef50_B5QVA0 Formate hydrogenlyase subunit 3 n=43 Tax=Enterobacteriaceae RepID=B5QVA0_SALEP Length = 608 Score = 319 bits (819), Expect = 2e-85, Method: Composition-based stats. Identities = 222/634 (35%), Positives = 345/634 (54%), Gaps = 31/634 (4%) Query: 1 MDALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTL 60 M +L L+T + + A++ + L+ ++GI VG + +G T L + VT+ Sbjct: 1 MSSLSLITSGVAWFAAAAVLAFLFSFHKALSGWIAGIGGAVGSLCTAGAGFTALTSAVTV 60 Query: 61 VARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNI 120 + F L++ L+A ++ + L + SL+++ + R + K +N+ Sbjct: 61 ----SGVMPFTGHMLQITPLNAIWLITLGLCGLFVSLFNIDWHRHPQVKANG---LLINL 113 Query: 121 FIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMI 180 +A+ V +V N +V+ E+M+L + FL G L+F + G++L+ I Sbjct: 114 LMAAAVCAVVASNLGTMVVMAEIMALCAVFLTG------GSKEGKLWFALGRLGTLLLAI 167 Query: 181 AFLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPS 240 A L+ + G+LD + L S ++LL GFG AG++PLH W+P+AH A + Sbjct: 168 ACWLVWQRYGTLDLGLLDQRAQQLPLGSDIWLLGVIGFGLLAGIIPLHGWVPQAHANASA 227 Query: 241 HASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDI 300 A+AL S V++KI G+L + L PLWWG+ ++ +G I+A +G LYAL E +I Sbjct: 228 PAAALFSTVVMKI---GLLGILTLSLLGGNAPLWWGVALLVLGMITAFVGGLYALMEHNI 284 Query: 301 KRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAG 360 +RLLA+ T+EN+GIILL +G + G++L+ P+L +GL G L+HLLNH+LFK +LFLGAG Sbjct: 285 QRLLAYHTLENIGIILLGLGAGVTGIALNQPVLIALGLTGGLYHLLNHSLFKSVLFLGAG 344 Query: 361 AIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRV 420 +I R D+EK+G + KRMP + A L+G +A++A+PPLNGF EW +QS F L Sbjct: 345 SIWFRTGHRDIEKLGGIGKRMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSFFKLGNS 404 Query: 421 EAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLL 480 A +L GP+ V LA+TG LAVMC K+YG+TF GAPR+ AE A P M V+++ Sbjct: 405 GAFVGRLLGPLLAVGLAITGALAVMCMAKVYGVTFLGAPRTKEAENASCAPILMGVSVVA 464 Query: 481 LAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLA 540 LA CV+ ++A WL P I ++ + L T HT V+ ++ LLL+A Sbjct: 465 LAICCVIGGVAAPWLLPMI---------------STAVPLPLETAHTTVSQPMITLLLVA 509 Query: 541 MPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQ 600 PLLP + + R R G AW CGY E +M + G P++ F+ + +LR+ Sbjct: 510 CPLLPFIIMAMFKGNRLPSRSRGAAWVCGYDHEQSMVITAYGFAMPVKEAFAPVLKLRKW 569 Query: 601 LDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIV 634 L+P + A + V+ IV Sbjct: 570 LNPVSLVPGWQNAAAAVLFRRLALIELAVLVVIV 603 >UniRef50_C0VMK3 NADH dehydrogenase I subunit L n=1 Tax=Acinetobacter sp. ATCC 27244 RepID=C0VMK3_9GAMM Length = 631 Score = 319 bits (818), Expect = 2e-85, Method: Composition-based stats. Identities = 133/682 (19%), Positives = 255/682 (37%), Gaps = 77/682 (11%) Query: 8 TWSLILYLFASLASLFLLGLD---RLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARF 64 + IL+ L +A + + + V +I+G+ ++G T+ + Sbjct: 4 LYLTILFPLIGFILLAAGRNKLSENVAAIIGVGSVGLSAVFALIAGLAFTNSGDTVFVQH 63 Query: 65 APPFEFAD-----LTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMN 119 + ++L++D LS M+ +++ + + +++ YMR E A + N Sbjct: 64 LWTWFNVGGFAPGISLQLDGLSLIMMGMVTGVGFLIHIFASWYMRGEED--YARFFSYFN 121 Query: 120 IFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQ-DKTSINAGMLYFFIAHAGSVLI 178 +F+ASM+ L++ DN + +E + L S+ L+ + + A + F + G V + Sbjct: 122 LFVASMLLLVLGDNLALLFLGWEGVGLCSYLLIGFYYSNPANGWAAIKAFTVTRVGDVFL 181 Query: 179 MIAFLLMGRESGSLDFASFRT-----LSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPR 233 +IA L+ ++ G+L+ ++ S L+ L+ F G K+ +PL +WL Sbjct: 182 LIALFLLYQQFGTLNTQYIVENAATVMTQSSSLSIWTALMLFLGAAGKSAQIPLQTWLAD 241 Query: 234 AHPAAPSHASAL-MSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVL 292 A A P+ SAL + MV G++ + + + + + GA++ L+ Sbjct: 242 AM-AGPTPVSALIHAATMVTAGVYLCCR----MFSVMEMAPEVMQFISITGAVTLLVAGF 296 Query: 293 YALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFK 352 AL + DIKR+LA+ST+ +G + +AVG LFH+L HA FK Sbjct: 297 AALVQTDIKRILAYSTMSQLGYMFMAVG--------------AEAYQAGLFHMLTHAFFK 342 Query: 353 GLLFLGAGAIISRL-HTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLN-GFISEWYT 410 LLFL +GA+I H ++ KMG L K + A IG A++AIP L GF S+ Sbjct: 343 ALLFLSSGAVILAYHHEQNIFKMGGLFKHNKFLFACFAIGGGALAAIPFLTVGFFSKDAI 402 Query: 411 WQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEV 470 +++ + + L + ++ I F G ++ + Sbjct: 403 LWQVWAHGHTTGIETFGT---LFWVGVAGAFLTSIYTFRLIWIVFFGEEKTAYHPIK--- 456 Query: 471 PNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVT 530 T + +LA L + + N + H Sbjct: 457 GATYWAPLAILAVLSTGVG-------ALLQAPVIGILNQAGIPAFVMTDALAHLQHGVEL 509 Query: 531 PSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVV 590 ++ + L + + + + + + + + L + Sbjct: 510 KAVGIALAGLAVGIFLFAFAYGAVK---------------------SFAQSSLGAGLAHI 548 Query: 591 FSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSG 650 F D + W ++ P + + Q+G Sbjct: 549 CRTAFGFDALYDIVFVKPYLFIAKILGRDPVDGLW---LVLPAIVKGGNSFTSAR--QTG 603 Query: 651 DFRLYCLYVVAALVVLLIAIAV 672 R Y + +VVLL+ + V Sbjct: 604 SLREYASSMSLGIVVLLMILIV 625 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.316 0.155 0.455 Lambda K H 0.267 0.0474 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 4,306,967,553 Number of Sequences: 3077464 Number of extensions: 233574516 Number of successful extensions: 1530142 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 5115 Number of HSP's successfully gapped in prelim test: 6695 Number of HSP's that attempted gapping in prelim test: 1465954 Number of HSP's gapped (non-prelim): 31992 length of query: 672 length of database: 1,040,396,356 effective HSP length: 136 effective length of query: 536 effective length of database: 621,861,252 effective search space: 333317631072 effective search space used: 333317631072 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.0 bits) S2: 97 (41.8 bits)