16/01/2012 02:17:13 : INFO  : Run start: Mon Jan 16 02:17:11 GMT 2012
16/01/2012 02:17:24 : INFO  : Initialised job
16/01/2012 02:17:28 : INFO  : Renaming log file 'phyre2_20120116_021710.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/64e437e3879ae46e/phyre_20120116_021710.log'
16/01/2012 02:17:30 : INFO  : Initialised job:
Sequence
>batch____
MSVFSLKIDIADNKFFNGETSPLFSQSQAKLARQFHQKIAGYRPTPLCALDDLANLFGVK
KILVKDESKRFGLNAFKMLGGAYAIAQLLCEKYHLDIETLSFEHLKNAIGEKMTFATTTD
GNHGRGVAWAAQQLGQNAVIYMPKGSAQERVDAILNLGAECIVTDMNYDDTVRLTMQHAQ
QHGWEVVQDTAWEGYTKIPTWIMQGYATLADEAVEQMREMGVTPTHVLLQAGVGAMAGGV
LGYLVDVYSPQNLHSIIVEPDKADCIYRSGVKGDIVNVGGDMATIMAGLACGEPNPLGWE
ILRNCATQFISCQDSVAALGMRVLGNPYGNDPRIISGESGAVGLGVLAAVHYHPQRQSLM
EKLALNKDAVVLVISTEGDTDVKHYREVVWEGKHAVAP

16/01/2012 02:17:33 : INFO  : Checked sequence
16/01/2012 02:17:39 : INFO  : Finding homologues with PSI-BLAST
16/01/2012 02:17:42 : INFO  : PSI-BLAST 3 iterations
16/01/2012 02:19:45 : INFO  : PSI-BLAST 5 iterations
16/01/2012 02:22:08 : INFO  : Finished PSI-BLAST
16/01/2012 02:22:13 : INFO  : Running Buildali to generate a3m file
16/01/2012 02:34:31 : INFO  : Converting to HMM
16/01/2012 02:34:37 : INFO  : Calibrating HMM
16/01/2012 02:35:01 : INFO  : Searching HMM database
16/01/2012 02:42:04 : INFO  : Finished buildali
16/01/2012 02:42:07 : INFO  : Predicting secondary structure
16/01/2012 02:42:24 : INFO  : Predicted secondary structure (PSI-Pred)
16/01/2012 02:42:27 : INFO  : Predicting Disordered regions
16/01/2012 02:42:35 : INFO  : Predicted Disorder (Disopred)
16/01/2012 02:42:39 : INFO  : Running memsat_svm check
16/01/2012 02:43:15 : INFO  : Globular protein
16/01/2012 02:43:18 : INFO  : Predicted Transmembrane (memsat_svm) ID '64e437e3879ae46e'
16/01/2012 02:43:21 : INFO  : Initialising fold library search
16/01/2012 02:43:29 : INFO  : Initialised search input
16/01/2012 02:43:33 : INFO  : Building Ensemble models
16/01/2012 02:43:40 : INFO  : Building hh.c1tdjA_.model.1.pdb
16/01/2012 02:44:10 : INFO  : Building hh.c3r0zA_.model.2.pdb
16/01/2012 02:44:34 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/64e437e3879ae46e/hh.c3r0zA_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/64e437e3879ae46e/c3r0zA_.2.pdb
16/01/2012 02:44:42 : INFO  : Building hh.c3l6cA_.model.3.pdb
16/01/2012 02:45:07 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/64e437e3879ae46e/hh.c3l6cA_.model.3.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/64e437e3879ae46e/c3l6cA_.3.pdb
16/01/2012 02:45:16 : INFO  : Building hh.c3iauA_.model.4.pdb
16/01/2012 02:45:40 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/64e437e3879ae46e/hh.c3iauA_.model.4.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/64e437e3879ae46e/c3iauA_.4.pdb
16/01/2012 02:45:48 : INFO  : Building hh.d1v71a1.model.5.pdb
16/01/2012 02:46:11 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/64e437e3879ae46e/hh.d1v71a1.model.5.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/64e437e3879ae46e/d1v71a1.5.pdb
16/01/2012 02:46:20 : INFO  : Building hh.d1pwha_.model.6.pdb
16/01/2012 02:46:46 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/64e437e3879ae46e/hh.d1pwha_.model.6.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/64e437e3879ae46e/d1pwha_.6.pdb
16/01/2012 02:46:55 : INFO  : Building c1tdjA_.1.pdb
16/01/2012 02:47:25 : INFO  : Building c3r0zA_.2.pdb
16/01/2012 02:47:55 : INFO  : Building c3l6cA_.3.pdb
16/01/2012 02:48:24 : INFO  : Building c3iauA_.4.pdb
16/01/2012 02:48:54 : INFO  : Building d1v71a1.5.pdb
16/01/2012 02:49:23 : INFO  : Building d1pwha_.6.pdb
16/01/2012 02:49:52 : INFO  : Building c2gn0A_.7.pdb
16/01/2012 02:50:21 : INFO  : Building d1ve5a1.8.pdb
16/01/2012 02:50:50 : INFO  : Building d1p5ja_.9.pdb
16/01/2012 02:51:21 : INFO  : Building c1p5jA_.10.pdb
16/01/2012 02:51:50 : INFO  : Building d1tdja1.11.pdb
16/01/2012 02:52:21 : INFO  : Building c2rkbE_.12.pdb
16/01/2012 02:52:50 : INFO  : Building c1x1qA_.13.pdb
16/01/2012 02:53:19 : INFO  : Building d1v8za1.14.pdb
16/01/2012 02:53:48 : INFO  : Building d1qopb_.15.pdb
16/01/2012 02:54:18 : INFO  : Building c1jbqD_.16.pdb
16/01/2012 02:54:47 : INFO  : Building d1jbqa_.17.pdb
16/01/2012 02:55:17 : INFO  : Building d1e5xa_.18.pdb
16/01/2012 02:55:46 : INFO  : Building c3pc3A_.19.pdb
16/01/2012 02:56:16 : INFO  : Building c2d1fA_.20.pdb
16/01/2012 02:59:55 : INFO  : Finished HH model building
16/01/2012 02:59:59 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
16/01/2012 03:01:36 : INFO  : html domain output complete ID '64e437e3879ae46e'
16/01/2012 05:49:28 : INFO  : Run end  : Mon Jan 16 05:49:26 GMT 2012
