Phyre 2 alignment of P66899 with c2rgwD_

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Job Description | P66899
Confidence | 76.73% | Date | Thu Jan 5 12:10:21 GMT 2012
Rank | 54 | Aligned Residues | 57
% Identity | 12% | Template | c2rgwD_
PDB info | PDB header:transferase | Chain: D: PDB Molecule:aspartate carbamoyltransferase; | PDBTitle: catalytic subunit of m. jannaschii aspartate2 transcarbamoylase
Resolution | 2.80 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 110 | . | . | . | . | . | . | . | . |  | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . |  | . | . | . | . | . | 140 | . | . | . | . | . | . |  |  | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | G | E | K | M | T | F | A | T | T | . | T | D | G | N | H | G | R | G | V | A | W | A | A | Q | Q | L | . | G | Q | N | A | V | I | Y | M | P | K | G | S | . | . | A | Q | E | R | V | D | A | I | L | N | L | G | A | E | C | I | V | T | D | M
Query Conservation |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | G | I | K | I | A | F | V | G | D | L | K | Y | G | R | T | V | H | S | L | V | Y | A | L | S | L | F | E | N | V | E | M | Y | F | V | S | P | K | E | L | R | L | P | K | D | I | I | E | D | L | K | A | K | N | I | K | F | Y | E | K | E | S
Template Known Secondary structure |  | S |  |  |  |  |  |  | S |  |  | S | S |  |  |  |  |  |  |  |  |  |  |  | T | T | S | S | S |  |  |  |  |  |  |  |  | S | T | T |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  | S | S
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 151 | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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