Phyre 2 alignment of P66899 with c2f1kD_

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Job Description | P66899
Confidence | 28.78% | Date | Thu Jan 5 12:10:21 GMT 2012
Rank | 174 | Aligned Residues | 43
% Identity | 14% | Template | c2f1kD_
PDB info | PDB header:oxidoreductase | Chain: D: PDB Molecule:prephenate dehydrogenase; | PDBTitle: crystal structure of synechocystis arogenate dehydrogenase
Resolution | 1.55 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 112 | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | K | M | T | F | A | T | T | T | D | G | N | H | G | R | G | V | A | W | A | A | Q | Q | L | G | Q | N | A | V | I | Y | M | P | K | G | S | A | Q | E | R | V | D | A | I | L | N | L | G | A
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | K | I | G | V | V | G | L | . | . | G | L | I | G | A | S | L | A | G | D | L | R | R | R | G | H | Y | L | I | G | V | . | . | . | S | R | Q | Q | S | T | C | E | K | A | V | E | R | Q | L
Template Known Secondary structure |  |  |  |  |  |  |  |  | . | . | S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  | . | . | . |  | S |  |  |  |  |  |  |  |  |  |  | T | T | S
Template Predicted Secondary structure |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 2 | . | . | . | . | . | . |  |  | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . |  |  |  | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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