Phyre 2 alignment of P75711 with c2kykA_

Return to main results | Retrieve Phyre Job Id

Job Description | P75711
Confidence | 11.38% | Date | Thu Jan 5 12:13:19 GMT 2012
Rank | 13 | Aligned Residues | 16
% Identity | 38% | Template | c2kykA_
PDB info | PDB header:ligase | Chain: A: PDB Molecule:e3 ubiquitin-protein ligase itchy homolog; | PDBTitle: the sandwich region between two lmp2a py motif regulates the2 interaction between aip4ww2domain and py motif
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 73 | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | G | K | H | L | T | I | L | P | Y | G | W | V | R | F | I | T
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | G | R | A | M | G | P | L | P | P | G | W | E | R | R | V | D
Template Known Secondary structure |  |  |  | S | S |  |  |  |  | S | S |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | .

Download: | Text version | FASTA pairwise alignment | 3D Model in PDB format

View in Jmol

|  | Close Jmol

Send structure to FirstGlance for more viewing options

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions