Phyre 2 alignment of P75711 with c3fwbB_

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Job Description | P75711
Confidence | 4.06% | Date | Thu Jan 5 12:13:19 GMT 2012
Rank | 71 | Aligned Residues | 24
% Identity | 42% | Template | c3fwbB_
PDB info | PDB header:cell cycle, transcription | Chain: B: PDB Molecule:nuclear mrna export protein sac3; | PDBTitle: sac3:sus1:cdc31 complex
Resolution | 2.50 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 24 | . | . | . | . | . | 30 | . | . | . | . | . | . | . |  |  | . | . | 40 | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |
Query Sequence |  | L | F | Y | L | F | L | I | A | R | L | K | Q | R | Y | . | . | S | I | R | E | I | K | R | D | L | W
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | L | Y | D | A | F | L | H | E | R | L | Y | L | I | Y | M | D | S | R | A | E | L | K | R | N | S | T
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 768 | . | 770 | . | . | . | . | . | . | . | . | . | 780 | . | . | . | . | . | . | . | . | . | 790 | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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