16/01/2012 21:14:44 : INFO  : Run start: Mon Jan 16 21:14:43 GMT 2012
16/01/2012 21:14:51 : INFO  : Initialised job
16/01/2012 21:14:54 : INFO  : Renaming log file 'phyre2_20120116_211442.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/63ca54b846e75063/phyre_20120116_211442.log'
16/01/2012 21:14:56 : INFO  : Initialised job:
Sequence
>batch____
MKRSISFRPTLLALVLATNFPVAHAAVPKDMLVIGKAADPQTLDPAVTIDNNDWTVTYPS
YQRLVQYKTDGDKGSTDVEGDLASSWKASDDQKEWTFTLKDNAKFADGTPVTAEAVKLSF
ERLLKIGQGPAEAFPKDLKIDAPDEHTVKFTLSQPFAPFLYTLANDGASIINPAVLKEHA
ADDARGFLAQNTAGSGPFMLKSWQKGQQLVLVPNPHYPGNKPNFKRVSVKIIGESASRRL
QLSRGDIDIADALPVDQLNALKQENKVNVAEYPSLRVTYLYLNNSKAPLNQADLRRAISW
STDYQGMVNGILSGNGKQMRGPIPEGMWGYDATAMQYNHDETKAKAEWDKVTSKPTSLTF
LYSDNDPNWEPIALATQSSLNKLGIIVKLEKLANATMRDRVGKGDYDIAIGNWSPDFADP
YMFMNYWFESDKKGLPGNRSFYENSEVDKLLRNALATTDQTQRTRDYQQAQKIVIDDAAY
VYLFQKNYQLAMNKEVKGFVFNPMLEQVFNINTMSK

16/01/2012 21:14:57 : INFO  : Checked sequence
16/01/2012 21:15:00 : INFO  : Finding homologues with PSI-BLAST
16/01/2012 21:15:01 : INFO  : PSI-BLAST 3 iterations
16/01/2012 21:18:19 : INFO  : PSI-BLAST 5 iterations
16/01/2012 21:22:36 : INFO  : Finished PSI-BLAST
16/01/2012 21:22:38 : INFO  : Running Buildali to generate a3m file
16/01/2012 22:08:43 : INFO  : Converting to HMM
16/01/2012 22:08:57 : INFO  : Calibrating HMM
16/01/2012 22:09:17 : INFO  : Searching HMM database
16/01/2012 22:21:25 : INFO  : Finished buildali
16/01/2012 22:21:26 : INFO  : Predicting secondary structure
16/01/2012 22:21:32 : INFO  : Predicted secondary structure (PSI-Pred)
16/01/2012 22:21:33 : INFO  : Predicting Disordered regions
16/01/2012 22:21:36 : INFO  : Predicted Disorder (Disopred)
16/01/2012 22:21:37 : INFO  : Running memsat_svm check
16/01/2012 22:23:45 : INFO  : Globular protein
16/01/2012 22:23:47 : INFO  : Predicted Transmembrane (memsat_svm) ID '63ca54b846e75063'
16/01/2012 22:23:50 : INFO  : Initialising fold library search
16/01/2012 22:23:53 : INFO  : Initialised search input
16/01/2012 22:23:54 : INFO  : Building Ensemble models
16/01/2012 22:23:58 : INFO  : Building hh.c3tpaA_.model.1.pdb
16/01/2012 22:24:12 : INFO  : Building hh.d1dpea_.model.2.pdb
16/01/2012 22:24:22 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/63ca54b846e75063/hh.d1dpea_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/63ca54b846e75063/d1dpea_.2.pdb
16/01/2012 22:24:26 : INFO  : Building hh.c3m8uA_.model.3.pdb
16/01/2012 22:24:37 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/63ca54b846e75063/hh.c3m8uA_.model.3.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/63ca54b846e75063/c3m8uA_.3.pdb
16/01/2012 22:24:41 : INFO  : Building hh.d1zlqa1.model.4.pdb
16/01/2012 22:24:51 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/63ca54b846e75063/hh.d1zlqa1.model.4.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/63ca54b846e75063/d1zlqa1.4.pdb
16/01/2012 22:24:55 : INFO  : Building hh.c2wokA_.model.5.pdb
16/01/2012 22:25:08 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/63ca54b846e75063/hh.c2wokA_.model.5.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/63ca54b846e75063/c2wokA_.5.pdb
16/01/2012 22:25:12 : INFO  : Building hh.d1jeta_.model.6.pdb
16/01/2012 22:25:23 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/63ca54b846e75063/hh.d1jeta_.model.6.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/63ca54b846e75063/d1jeta_.6.pdb
16/01/2012 22:25:27 : INFO  : Building c3tpaA_.1.pdb
16/01/2012 22:25:40 : INFO  : Building d1dpea_.2.pdb
16/01/2012 22:25:52 : INFO  : Building c3m8uA_.3.pdb
16/01/2012 22:26:05 : INFO  : Building d1zlqa1.4.pdb
16/01/2012 22:26:18 : INFO  : Building c2wokA_.5.pdb
16/01/2012 22:26:30 : INFO  : Building d1jeta_.6.pdb
16/01/2012 22:26:42 : INFO  : Building c3o9pA_.7.pdb
16/01/2012 22:26:53 : INFO  : Building d1xoca1.8.pdb
16/01/2012 22:27:05 : INFO  : Building d1uqwa_.9.pdb
16/01/2012 22:27:17 : INFO  : Building c3t66A_.10.pdb
16/01/2012 22:27:27 : INFO  : Building c1ztyA_.11.pdb
16/01/2012 22:27:39 : INFO  : Building c2grvC_.12.pdb
16/01/2012 22:27:50 : INFO  : Building c3rqtA_.13.pdb
16/01/2012 22:28:00 : INFO  : Building c2o7jA_.14.pdb
16/01/2012 22:28:11 : INFO  : Building d1vr5a1.15.pdb
16/01/2012 22:28:20 : INFO  : Building c3ftoA_.16.pdb
16/01/2012 22:28:30 : INFO  : Building c3ry3B_.17.pdb
16/01/2012 22:28:39 : INFO  : Building c2d5wA_.18.pdb
16/01/2012 22:28:49 : INFO  : Building c3lvuB_.19.pdb
16/01/2012 22:28:58 : INFO  : Building c3pamB_.20.pdb
16/01/2012 22:30:15 : INFO  : Finished HH model building
16/01/2012 22:30:15 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
16/01/2012 22:31:07 : INFO  : html domain output complete ID '63ca54b846e75063'
17/01/2012 03:11:49 : INFO  : Run end  : Tue Jan 17 03:11:48 GMT 2012
