Phyre 2 alignment of P76128 with c2ra9A_

Return to main results | Retrieve Phyre Job Id

Job Description | P76128
Confidence | 35.62% | Date | Thu Jan 5 12:19:19 GMT 2012
Rank | 60 | Aligned Residues | 54
% Identity | 13% | Template | c2ra9A_
PDB info | PDB header:unknown function | Chain: A: PDB Molecule:uncharacterized protein duf1285; | PDBTitle: crystal structure of a duf1285 family protein (sbal_2486) from2 shewanella baltica os155 at 1.40 a resolution
Resolution | 1.40 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 97 | . | . |  | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . |  | . | . | . | . | . | . | . | 150 | .
Predicted Secondary structure |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |
Query Sequence |  | F | T | L | . | K | D | N | A | K | F | A | D | G | T | P | V | T | A | E | A | V | K | L | S | F | E | R | L | L | K | I | G | Q | G | P | A | E | A | F | P | K | D | L | K | I | D | A | . | P | D | E | H | T | V | K | F | T
Query Conservation |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | F | D | I | N | A | L | G | D | W | T | Y | L | G | T | S | L | P | A | . | K | F | A | K | L | F | A | S | I | L | H | C | I | D | D | E | Y | F | L | I | T | P | V | E | K | V | R | V | Q | V | E | D | A | P | L | L | I | V
Template Known Secondary structure |  |  |  |  |  | T | T | S |  |  |  |  | T | T |  |  |  |  |  | . |  |  |  |  |  |  |  | T | T |  |  |  |  | T | T |  |  |  |  |  |  | S | S |  |  |  |  |  |  |  | S | S |  | S |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 34 | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . |  | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions