17 c3rqiA_ Probab=99.89   E-value=1.9e-24  Score=161.54  Aligned_columns=163  Identities=16%

Q ss_pred             EEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             69998699899999999999889899999898999999984799727620457765785111111235554210034431
Q batch____         2 RILLIEDDMLIGDGIKTGLSKMGFSVDWFTQGRQGKEALYSAPYDAVILDLTLPGMDGRDILREWREKGQREPVLILTAR   81 (219)
Q Consensus         2 kILiVdDd~~~~~~l~~~L~~~g~~v~~a~~~~eal~~~~~~~~dliilD~~mp~~~g~~~~~~ir~~~~~~~ii~lt~~   81 (219)
                      ||||||||+..++.++.+|++.||.|..|.|+++|++.+..++||+|+ |..||+++|..++.++|...+.+|+|++|++
T Consensus         3 ~ILIVDD~~~~~~~l~~~L~~~g~~v~~a~~~~eal~~~~~~~~dlil-d~~~~~~~g~~~~~~~~~~~~~~~iI~lt~~   81 (169)
T c3rqiA_           3 NFLVIDDNEVFAGTLARGLERRGYAVRQAHNKDEALKLAGAEKFEFIT-VLHLGNDSGLSLIAPLCDLQPDARILVLTGY   81 (169)
T ss_dssp             EEEEECSCHHHHHHHHHHHHHTTCEEEEECSHHHHHHHHTTSCCSEEE-CCEETTEESHHHHHHHHHHCTTCEEEEEESS
T ss_pred             EEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHCCCCCCEEE-CCCCCCCCCHHHHHHHCCCCCCCCCCCCCCC
T ss_conf             599973998999999999998798999988989999952223553020-0357762101343320135644332113467


Q ss_pred             CHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf             0000001234431011222331123543045320223422222222-222222333211111122211131354334443
Q batch____        82 DALAERVEGLRLGADDYLCKPFALIEVAARLEALMRRTNGQASNEL-RHGNVMLDPGKRIATLAGEPLTLKPKEFALLEL  160 (219)
Q Consensus        82 ~~~~~~~~~~~~g~~~yl~Kp~~~~~l~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~lt~~E~~~l~~  160 (219)
                      ++.....+++..|+++|+.||+..+++..+++.............. .......+.....+...+..+.++.+|+.++..
T Consensus        82 ~~~~~~~~a~~~Ga~dyi~KP~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~l~~~r~  161 (169)
T c3rqiA_          82 ASIATAVQAVKDGADNYLAKPANVESILAALQTNASEVQAEEALENPVVLSLEWEHIQRVLAENNNNISATARALNMHRR  161 (169)
T ss_dssp             CCHHHHHHHHHHTCSEEEESSCCHHHHHHHTSTTHHHHHHHHHHHSCCCCCCHHHHHHHHHHHTTSCHHHHHHHHTSCHH
T ss_pred             CCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
T ss_conf             99899999996699478816889899999999999862002344456765320489878998668406787999999999


Q ss_pred             HHHCC
Q ss_conf             33106
Q batch____       161 LMRNA  165 (219)
Q Consensus       161 l~~~~  165 (219)
                      .+...
T Consensus       162 ~l~~k  166 (169)
T c3rqiA_         162 TLQRK  166 (169)
T ss_dssp             HHHHH
T ss_pred             HHHHH
T ss_conf             99998