13 c1rnlA_ Probab=99.90   E-value=1.1e-23  Score=157.13  Aligned_columns=179  Identities=30%

Q ss_pred             CEEEEECCCHHHHHHHHHHHHHCC--CEEEEECCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             969998699899999999999889--899999898999999984799727620457765785111111235554210034
Q batch____         1 MRILLIEDDMLIGDGIKTGLSKMG--FSVDWFTQGRQGKEALYSAPYDAVILDLTLPGMDGRDILREWREKGQREPVLIL   78 (219)
Q Consensus         1 mkILiVdDd~~~~~~l~~~L~~~g--~~v~~a~~~~eal~~~~~~~~dliilD~~mp~~~g~~~~~~ir~~~~~~~ii~l   78 (219)
                      +|||||||||.++.+++..|+..+  ..|..|.|+.+|++.+.+..||++++|+.||+++|...+..++...+..+++++
T Consensus         3 i~Ilivdd~~~~~~~l~~~L~~~~~~~~v~~a~~~~eal~~~~~~~pdiilld~~l~~~~g~~~~~~~~~~~~~~~~~~~   82 (200)
T c1rnlA_           3 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGLETLDKLREKSLSGRIVVF   82 (200)
T ss_dssp             EEEEEECSCHHHHHHHHHHHHTCTTEEEEEEESSHHHHHHHHHHHCCSEEEEETTCGGGCHHHHHHHHTTSCCCSEEEEE
T ss_pred             CEEEEECCCHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCC
T ss_conf             08999749989999999999848981799997898999999987199755421111100013689997420310012344


Q ss_pred             CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf             43100000012344310112223311235430453202234222222222222223332111111222111313543344
Q batch____        79 TARDALAERVEGLRLGADDYLCKPFALIEVAARLEALMRRTNGQASNELRHGNVMLDPGKRIATLAGEPLTLKPKEFALL  158 (219)
Q Consensus        79 t~~~~~~~~~~~~~~g~~~yl~Kp~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~E~~~l  158 (219)
                      ++.............+..++..++.....+..................              .........+|++|..++
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~lt~re~~vl  148 (200)
T c1rnlA_          83 SVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEMVLSEAL--------------TPVLAASLQLTPRERDIL  148 (200)
T ss_dssp             CSCSCHHHHHHHHHTTCSEEECTTSCHHHHHHHHHHHHHSCCCCCTTT--------------HHHHHHHCCCCHHHHHHH
T ss_pred             CCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--------------CCCCCCCCCCCCCCCCCC
T ss_conf             453101110000112222221001222222222222222222222222--------------211111111222111112


Q ss_pred             HHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCC
Q ss_conf             43331068701599999975146778871489999999997508
Q batch____       159 ELLMRNAGRVLSRKLIEEKLYTWDEEVTSNAVEVHVHHLRRKLG  202 (219)
Q Consensus       159 ~~l~~~~~~~~s~~~i~~~i~~~~~~~~~~tv~~~I~rlr~KL~  202 (219)
                      .++..+.    |.++|++.+     ++|.+||++|+++|++||+
T Consensus       149 ~~~~~g~----s~keIA~~L-----~iS~~TV~~h~~~i~~KL~  183 (200)
T c1rnlA_         149 KLIAQGL----PNKMIARRL-----DITESTVKVHVKHMLKKMK  183 (200)
T ss_dssp             HHHHTTC----CHHHHHHHH-----TCCHHHHHHHHHHHHHHTT
T ss_pred             CCCCCCC----CHHHHHHHH-----CCCCHHHHHHHHHHHHHCC
T ss_conf             2245677----689989886-----8870699999999999817