Phyre 2 alignment of P0AE18 with c2k5jB_

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Job Description | P0AE18
Confidence | 6.66% | Date | Thu Jan 5 11:22:16 GMT 2012
Rank | 99 | Aligned Residues | 53
% Identity | 8% | Template | c2k5jB_
PDB info | PDB header:structural genomics, unknown function | Chain: B: PDB Molecule:uncharacterized protein yiif; | PDBTitle: solution structure of protein yiif from shigella flexneri2 serotype 5b (strain 8401) . northeast structural genomics3 consortium target sft1
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | G | D | T | S | K | M | F | I | V | G | K | P | T | I | M | G | E | R | L | C | R | I | T | Q | E | S | L | Y | L | A | L | R | M | V | K | P | G | I | N | L | R | E | I | G | A | . | A | I | Q | K | F | V | E | A | E | G | F | S | V | V | R | E | Y | C | G
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | I | D | M | G | R | I | L | L | . | . | D | L | S | N | E | V | I | K | Q | L | D | D | L | E | V | . | . | . | . | . | . | . | . | . | Q | R | N | L | P | R | A | D | L | L | R | E | A | V | D | Q | Y | L | I | N | Q | S | Q | T | A | R | T | S | V | P | G
Template Known Secondary structure |  | S |  |  |  |  |  |  |  | . | . |  |  |  | T |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  | T | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |  | T | T |  | S |  |  |  |  | T
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 207 | . | . | 210 | . | . | . | . |  |  | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
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