17/01/2012 17:44:38 : INFO  : Run start: Tue Jan 17 17:44:36 GMT 2012
17/01/2012 17:44:47 : INFO  : Initialised job
17/01/2012 17:44:50 : INFO  : Renaming log file 'phyre2_20120117_174435.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/6373fe028fd6d4af/phyre_20120117_174435.log'
17/01/2012 17:44:52 : INFO  : Initialised job:
Sequence
>batch____
MAISIKTPEDIEKMRVAGRLAAEVLEMIEPYVKPGVSTGELDRICNDYIVNEQHAVSACL
GYHGYPKSVCISINEVVCHGIPDDAKLLKDGDIVNIDVTVIKDGFHGDTSKMFIVGKPTI
MGERLCRITQESLYLALRMVKPGINLREIGAAIQKFVEAEGFSVVREYCGHGIGRGFHEE
PQVLHYDSRETNVVLKPGMTFTIEPMVNAGKKEIRTMKDGWTVKTKDRSLSAQYEHTIVV
TDNGCEILTLRKDDTIPAIISHDE

17/01/2012 17:44:54 : INFO  : Checked sequence
17/01/2012 17:44:59 : INFO  : Finding homologues with PSI-BLAST
17/01/2012 17:45:01 : INFO  : PSI-BLAST 3 iterations
17/01/2012 17:46:57 : INFO  : PSI-BLAST 5 iterations
17/01/2012 17:48:59 : INFO  : Finished PSI-BLAST
17/01/2012 17:49:02 : INFO  : Running Buildali to generate a3m file
17/01/2012 18:01:22 : INFO  : Converting to HMM
17/01/2012 18:01:26 : INFO  : Calibrating HMM
17/01/2012 18:01:42 : INFO  : Searching HMM database
17/01/2012 18:06:51 : INFO  : Finished buildali
17/01/2012 18:06:53 : INFO  : Predicting secondary structure
17/01/2012 18:07:05 : INFO  : Predicted secondary structure (PSI-Pred)
17/01/2012 18:07:07 : INFO  : Predicting Disordered regions
17/01/2012 18:07:13 : INFO  : Predicted Disorder (Disopred)
17/01/2012 18:07:17 : INFO  : Running memsat_svm check
17/01/2012 18:07:35 : INFO  : Globular protein
17/01/2012 18:07:37 : INFO  : Predicted Transmembrane (memsat_svm) ID '6373fe028fd6d4af'
17/01/2012 18:07:40 : INFO  : Initialising fold library search
17/01/2012 18:07:46 : INFO  : Initialised search input
17/01/2012 18:07:50 : INFO  : Building Ensemble models
17/01/2012 18:07:55 : INFO  : Building hh.d2gg2a1.model.1.pdb
17/01/2012 18:08:20 : INFO  : Building d2gg2a1.1.pdb
17/01/2012 18:08:45 : INFO  : Building c2g6pA_.2.pdb
17/01/2012 18:09:11 : INFO  : Building c2gz5A_.3.pdb
17/01/2012 18:09:35 : INFO  : Building c3s6bA_.4.pdb
17/01/2012 18:09:59 : INFO  : Building c3tavA_.5.pdb
17/01/2012 18:10:22 : INFO  : Building c3mx6A_.6.pdb
17/01/2012 18:10:44 : INFO  : Building c1yj3A_.7.pdb
17/01/2012 18:11:05 : INFO  : Building d1o0xa_.8.pdb
17/01/2012 18:11:29 : INFO  : Building c1w7vD_.9.pdb
17/01/2012 18:11:55 : INFO  : Building c2oknB_.10.pdb
17/01/2012 18:12:19 : INFO  : Building d1qxya_.11.pdb
17/01/2012 18:12:43 : INFO  : Building c3l24A_.12.pdb
17/01/2012 18:13:07 : INFO  : Building c1chmA_.13.pdb
17/01/2012 18:13:33 : INFO  : Building c2zsgB_.14.pdb
17/01/2012 18:14:03 : INFO  : Building d1chma2.15.pdb
17/01/2012 18:14:27 : INFO  : Building c3ig4E_.16.pdb
17/01/2012 18:14:49 : INFO  : Building c1wy2B_.17.pdb
17/01/2012 18:15:12 : INFO  : Building c3q6dA_.18.pdb
17/01/2012 18:15:35 : INFO  : Building c2howB_.19.pdb
17/01/2012 18:15:59 : INFO  : Building c3cb5A_.20.pdb
17/01/2012 18:16:46 : INFO  : Finished HH model building
17/01/2012 18:16:48 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
17/01/2012 18:17:47 : INFO  : html domain output complete ID '6373fe028fd6d4af'
17/01/2012 19:01:02 : INFO  : Run end  : Tue Jan 17 19:01:00 GMT 2012
