Phyre 2 alignment of P0AD21 with c2eifA_

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Job Description | P0AD21
Confidence | 16.28% | Date | Thu Jan 5 11:19:45 GMT 2012
Rank | 23 | Aligned Residues | 32
% Identity | 25% | Template | c2eifA_
PDB info | PDB header:gene regulation | Chain: A: PDB Molecule:protein (eukaryotic translation initiation factor 5a); | PDBTitle: eukaryotic translation initiation factor 5a from methanococcus2 jannaschii
Resolution | 1.80 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 66 | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 |  |  |  |  |  | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |
Query Sequence |  | S | D | I | E | V | P | C | S | V | L | E | C | E | G | E | P | C | L | F | V | N | R | Q | D | E | . | . | . | . | . | F | A | A | T | C | R | L | K
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | G | S | L | K | V | G | Q | Y | V | . | M | I | D | G | V | P | C | E | I | V | D | I | S | V | S | K | P | G | K | H | G | G | A | K | A | R | V | V
Template Known Secondary structure |  | G | G |  |  | T | T | S |  |  | . |  |  | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | S | S |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 13 | . | . | . | . | . | . | 20 | . |  | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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