Phyre 2 alignment of P0AD21 with d2gdta1

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Job Description | P0AD21
Confidence | 7.14% | Date | Thu Jan 5 11:19:45 GMT 2012
Rank | 40 | Aligned Residues | 27
% Identity | 33% | Template | d2gdta1
SCOP info | SARS Nsp1-like | SARS Nsp1-like | SARS Nsp1-like
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 72 | . | . | . | . | . | . | . |  |  |  |  |  |  |  | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | C | S | V | L | E | C | E | G | . | . | . | . | . | . | . | E | P | C | L | F | V | N | R | Q | D | E | F | A | A | T | C | R | L | K
Query Conservation |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | C | G | L | V | E | L | E | K | G | V | L | P | Q | L | E | Q | P | Y | V | F | I | K | R | S | D | A | L | S | T | N | H | G | H | K
Template Known Secondary structure |  |  |  |  |  |  |  |  | T | T | S | G | G | G | S |  | S |  |  |  |  |  |  |  |  | S | S |  |  |  |  |  | S | S |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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