Phyre 2 alignment of P0AD21 with c1n1vA_

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Job Description | P0AD21
Confidence | 19.58% | Date | Thu Jan 5 11:19:45 GMT 2012
Rank | 15 | Aligned Residues | 58
% Identity | 19% | Template | c1n1vA_
PDB info | PDB header:hydrolase | Chain: A: PDB Molecule:sialidase; | PDBTitle: trypanosoma rangeli sialidase in complex with dana
Resolution | 2.10 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | P | I | P | Q | N | G | P | C | G | D | N | S | L | V | A | L | K | L | L | S | P | D | G | D | N | A | W | S | V | M | Y | K | L | S | Q | A | L | S | D | I | E | V | P | C | S | V | L | E | C | E | G | E | P | C | L | F | V | N | R | Q | D
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | V | Y | P | V | Q | I | A | D | M | G | G | R | V | F | T | K | I | M | Y | S | E | D | D | G | N | T | W | K | F | A | E | G | R | S | K | F | G | C | S | . | . | . | E | P | A | V | L | E | W | E | G | K | L | I | I | N | N | R | V | D | G
Template Known Secondary structure |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  | S | S | T | T | S | S |  |  |  |  | S |  |  |  |  | T | T |  |  | . | . | . |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  | T | T
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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