Phyre 2 alignment of P0AFY2 with c2kpoA

Job Description P0AFY2
Confidence 32.25% Date Thu Jan 5 11:27:33 GMT 2012

Rank 74 Aligned Residues 65

% Identity 23% Template c2kpoA_

PDB info PDB header:de novo protein Chain: A: PDB Molecule:rossmann 2x2 fold protein; PDBTitle: solution nmr structure of de novo designed rossmann 2x2 fold protein,2 northeast structural genomics consortium target or16

Resolution UNK

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140						.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure																								.	.	.	.	.
Query SS confidence																								.	.	.	.	.
Query Sequence	L	D	Y	A	G	F	R	T	L	D	S	I	V	R	T	R	K	V	F	D	T	N	D	.	.	.	.	.	F	I	I	I	T	Q	R	F	H	C	E	R	A	L	F	I	A	L	H	M	G	I	Q	A	Q	C	Y	A	V	P	S	P	K	D	M	L	S	V	R	I	R	E	F
Query Conservation																								.	.	.	.	.
Alig confidence																								.	.	.	.	.																																				.
Template Conservation																																																																.
Template Sequence	L	E	L	R	T	V	K	T	E	D	E	L	K	K	Y	L	E	E	F	R	K	E	S	Q	N	I	K	V	L	I	L	V	S	N	D	E	E	L	D	K	A	K	E	L	A	Q	K	M	E	I	D	V	R	T	R	K	V	T	S	P	D	E	A	.	K	R	W	I	K	E	F
Template Known Secondary structure								S												T	S	S	T	T	S								S	S														T	T									S	S					.
Template Predicted Secondary structure																																																																.
Template SS confidence
	27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.		90	.	.	.	.	.	.

Download:

Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
Disclaimer
Terms and Conditions